locus-tag class description LJF99_RS00065 PF06892 Phage regulatory protein CII (CP76) LJF99_RS00080 PF00717 Peptidase S24-like LJF99_RS00090 PF02899 Phage integrase, N-terminal SAM-like domain LJF99_RS00090 PF00589 Phage integrase family LJF99_RS00100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS00100 PF03466 LysR substrate binding domain LJF99_RS00120 PF00149 Calcineurin-like phosphoesterase LJF99_RS00130 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LJF99_RS00135 PF09190 DALR domain LJF99_RS00135 PF01406 tRNA synthetases class I (C) catalytic domain LJF99_RS00140 PF13592 Winged helix-turn helix LJF99_RS00140 PF13358 DDE superfamily endonuclease LJF99_RS00190 PF01169 Uncharacterized protein family UPF0016 LJF99_RS00195 PF01253 Translation initiation factor SUI1 LJF99_RS00205 PF02421 Ferrous iron transport protein B LJF99_RS00205 PF07664 Ferrous iron transport protein B C terminus LJF99_RS00205 PF07670 Nucleoside recognition LJF99_RS00220 PF00483 Nucleotidyl transferase LJF99_RS00225 PF00437 Type II/IV secretion system protein LJF99_RS00235 PF00989 PAS fold LJF99_RS00235 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS00235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS00235 PF00072 Response regulator receiver domain LJF99_RS00235 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJF99_RS00235 PF01627 Hpt domain LJF99_RS00240 PF01032 FecCD transport family LJF99_RS00245 PF00005 ABC transporter LJF99_RS00250 PF00793 DAHP synthetase I family LJF99_RS00255 PF01219 Prokaryotic diacylglycerol kinase LJF99_RS00260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LJF99_RS00260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LJF99_RS00260 PF01842 ACT domain LJF99_RS00265 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LJF99_RS00270 PF01812 5-formyltetrahydrofolate cyclo-ligase family LJF99_RS00290 PF01113 Dihydrodipicolinate reductase, N-terminus LJF99_RS00290 PF05173 Dihydrodipicolinate reductase, C-terminus LJF99_RS00295 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LJF99_RS00295 PF00117 Glutamine amidotransferase class-I LJF99_RS00300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LJF99_RS00300 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LJF99_RS00300 PF02142 MGS-like domain LJF99_RS00305 PF00682 HMGL-like LJF99_RS00305 PF08502 LeuA allosteric (dimerisation) domain LJF99_RS00310 PF07759 Protein of unknown function (DUF1615) LJF99_RS00320 PF13592 Winged helix-turn helix LJF99_RS00320 PF13358 DDE superfamily endonuclease LJF99_RS00330 PF08378 Nuclease-related domain LJF99_RS00345 PF13302 Acetyltransferase (GNAT) domain LJF99_RS00350 PF00270 DEAD/DEAH box helicase LJF99_RS00350 PF00271 Helicase conserved C-terminal domain LJF99_RS00375 PF00376 MerR family regulatory protein LJF99_RS00375 PF09278 MerR, DNA binding LJF99_RS00390 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LJF99_RS00390 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJF99_RS00395 PF04898 Glutamate synthase central domain LJF99_RS00395 PF01645 Conserved region in glutamate synthase LJF99_RS00395 PF01493 GXGXG motif LJF99_RS00395 PF00310 Glutamine amidotransferases class-II LJF99_RS00400 PF04055 Radical SAM superfamily LJF99_RS00400 PF16199 Radical_SAM C-terminal domain LJF99_RS00405 PF00664 ABC transporter transmembrane region LJF99_RS00405 PF00005 ABC transporter LJF99_RS00405 PF03412 Peptidase C39 family LJF99_RS00485 PF07055 Enoyl reductase FAD binding domain LJF99_RS00485 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LJF99_RS00485 PF12241 Trans-2-enoyl-CoA reductase catalytic region LJF99_RS00490 PF03606 C4-dicarboxylate anaerobic carrier LJF99_RS00495 PF00155 Aminotransferase class I and II LJF99_RS00505 PF00462 Glutaredoxin LJF99_RS00510 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LJF99_RS00515 PF04851 Type III restriction enzyme, res subunit LJF99_RS00515 PF00271 Helicase conserved C-terminal domain LJF99_RS00520 PF00529 HlyD membrane-fusion protein of T1SS LJF99_RS00520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LJF99_RS00525 PF11742 Protein of unknown function (DUF3302) LJF99_RS00530 PF02554 Carbon starvation protein CstA LJF99_RS00535 PF04397 LytTr DNA-binding domain LJF99_RS00535 PF00072 Response regulator receiver domain LJF99_RS00540 PF07694 5TMR of 5TMR-LYT LJF99_RS00540 PF06580 Histidine kinase LJF99_RS00545 PF11871 Domain of unknown function (DUF3391) LJF99_RS00545 PF01966 HD domain LJF99_RS00550 PF00171 Aldehyde dehydrogenase family LJF99_RS00550 PF00465 Iron-containing alcohol dehydrogenase LJF99_RS00560 PF01914 MarC family integral membrane protein LJF99_RS00565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LJF99_RS00570 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS00575 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS00575 PF12911 N-terminal TM domain of oligopeptide transport permease C LJF99_RS00580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LJF99_RS00580 PF00005 ABC transporter LJF99_RS00590 PF00005 ABC transporter LJF99_RS00590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LJF99_RS00595 PF03741 Integral membrane protein TerC family LJF99_RS00600 PF00842 Alanine racemase, C-terminal domain LJF99_RS00600 PF01168 Alanine racemase, N-terminal domain LJF99_RS00610 PF00375 Sodium:dicarboxylate symporter family LJF99_RS00625 PF01979 Amidohydrolase family LJF99_RS00635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS00635 PF00672 HAMP domain LJF99_RS00640 PF01230 HIT domain LJF99_RS00675 PF13721 SecD export protein N-terminal TM region LJF99_RS00675 PF07549 SecD/SecF GG Motif LJF99_RS00675 PF02355 Protein export membrane protein LJF99_RS00680 PF02355 Protein export membrane protein LJF99_RS00680 PF07549 SecD/SecF GG Motif LJF99_RS00685 PF13426 PAS domain LJF99_RS00685 PF08447 PAS fold LJF99_RS00685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS00700 PF00361 Proton-conducting membrane transporter LJF99_RS00705 PF00361 Proton-conducting membrane transporter LJF99_RS00710 PF00361 Proton-conducting membrane transporter LJF99_RS00710 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LJF99_RS00715 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LJF99_RS00720 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LJF99_RS00725 PF12838 4Fe-4S dicluster domain LJF99_RS00730 PF00146 NADH dehydrogenase LJF99_RS00735 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LJF99_RS00735 PF00384 Molybdopterin oxidoreductase LJF99_RS00735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LJF99_RS00740 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LJF99_RS00740 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LJF99_RS00750 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LJF99_RS00750 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LJF99_RS00755 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LJF99_RS00760 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LJF99_RS00765 PF13677 Membrane MotB of proton-channel complex MotA/MotB LJF99_RS00765 PF00691 OmpA family LJF99_RS00770 PF01618 MotA/TolQ/ExbB proton channel family LJF99_RS00785 PF04536 TPM domain LJF99_RS00795 PF03411 Penicillin-insensitive murein endopeptidase LJF99_RS00800 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS00805 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJF99_RS00810 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS00815 PF00005 ABC transporter LJF99_RS00825 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LJF99_RS00830 PF00248 Aldo/keto reductase family LJF99_RS00840 PF00106 short chain dehydrogenase LJF99_RS00845 PF01212 Beta-eliminating lyase LJF99_RS00855 PF00072 Response regulator receiver domain LJF99_RS00860 PF03466 LysR substrate binding domain LJF99_RS00860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS00870 PF13592 Winged helix-turn helix LJF99_RS00870 PF13358 DDE superfamily endonuclease LJF99_RS00875 PF00563 EAL domain LJF99_RS00875 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS00875 PF03707 Bacterial signalling protein N terminal repeat LJF99_RS00880 PF00881 Nitroreductase family LJF99_RS00895 PF07690 Major Facilitator Superfamily LJF99_RS00900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS00900 PF03466 LysR substrate binding domain LJF99_RS00905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS00905 PF03466 LysR substrate binding domain LJF99_RS00910 PF00925 GTP cyclohydrolase II LJF99_RS00915 PF02224 Cytidylate kinase LJF99_RS00920 PF00575 S1 RNA binding domain LJF99_RS00925 PF00216 Bacterial DNA-binding protein LJF99_RS00935 PF18073 Rubredoxin metal binding domain LJF99_RS00940 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LJF99_RS00955 PF06508 Queuosine biosynthesis protein QueC LJF99_RS00960 PF04055 Radical SAM superfamily LJF99_RS00965 PF12843 Putative quorum-sensing-regulated virulence factor LJF99_RS00970 PF01923 Cobalamin adenosyltransferase LJF99_RS00975 PF00816 H-NS histone family LJF99_RS00985 PF03553 Na+/H+ antiporter family LJF99_RS00990 PF00265 Thymidine kinase LJF99_RS01000 PF10722 Putative bacterial sensory transduction regulator LJF99_RS01015 PF01168 Alanine racemase, N-terminal domain LJF99_RS01015 PF00842 Alanine racemase, C-terminal domain LJF99_RS01020 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LJF99_RS01020 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LJF99_RS01025 PF13247 4Fe-4S dicluster domain LJF99_RS01030 PF03916 Polysulphide reductase, NrfD LJF99_RS01035 PF00374 Nickel-dependent hydrogenase LJF99_RS01040 PF01750 Hydrogenase maturation protease LJF99_RS01045 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE LJF99_RS01050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LJF99_RS01055 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS01060 PF12911 N-terminal TM domain of oligopeptide transport permease C LJF99_RS01060 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS01065 PF00005 ABC transporter LJF99_RS01070 PF00005 ABC transporter LJF99_RS01070 PF08402 TOBE domain LJF99_RS01075 PF02492 CobW/HypB/UreG, nucleotide-binding domain LJF99_RS01080 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LJF99_RS01085 PF00586 AIR synthase related protein, N-terminal domain LJF99_RS01085 PF02769 AIR synthase related protein, C-terminal domain LJF99_RS01090 PF01924 Hydrogenase formation hypA family LJF99_RS01095 PF01455 HupF/HypC family LJF99_RS01100 PF01300 Telomere recombination LJF99_RS01100 PF17788 HypF Kae1-like domain LJF99_RS01100 PF07503 HypF finger LJF99_RS01100 PF00708 Acylphosphatase LJF99_RS01105 PF09107 Elongation factor SelB, winged helix LJF99_RS01105 PF09106 Elongation factor SelB, winged helix LJF99_RS01105 PF03144 Elongation factor Tu domain 2 LJF99_RS01105 PF00009 Elongation factor Tu GTP binding domain LJF99_RS01110 PF03841 L-seryl-tRNA selenium transferase LJF99_RS01110 PF12390 Selenocysteine synthase N terminal LJF99_RS01120 PF01750 Hydrogenase maturation protease LJF99_RS01125 PF07450 Formate hydrogenlyase maturation protein HycH LJF99_RS01130 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LJF99_RS01135 PF12838 4Fe-4S dicluster domain LJF99_RS01140 PF00374 Nickel-dependent hydrogenase LJF99_RS01140 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LJF99_RS01140 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LJF99_RS01145 PF00146 NADH dehydrogenase LJF99_RS01150 PF00361 Proton-conducting membrane transporter LJF99_RS01155 PF00037 4Fe-4S binding domain LJF99_RS01155 PF12798 4Fe-4S binding domain LJF99_RS01160 PF02705 K+ potassium transporter LJF99_RS01175 PF07693 KAP family P-loop domain LJF99_RS01180 PF13247 4Fe-4S dicluster domain LJF99_RS01180 PF12800 4Fe-4S binding domain LJF99_RS01195 PF00158 Sigma-54 interaction domain LJF99_RS01195 PF01590 GAF domain LJF99_RS01195 PF02954 Bacterial regulatory protein, Fis family LJF99_RS01200 PF02634 FdhD/NarQ family LJF99_RS01205 PF02132 RecR protein LJF99_RS01205 PF13662 Toprim domain LJF99_RS01210 PF00183 Hsp90 protein LJF99_RS01210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS01215 PF05191 Adenylate kinase, active site lid LJF99_RS01220 PF00762 Ferrochelatase LJF99_RS01225 PF01124 MAPEG family LJF99_RS01230 PF00294 pfkB family carbohydrate kinase LJF99_RS01235 PF00672 HAMP domain LJF99_RS01235 PF17200 Single Cache domain 2 LJF99_RS01235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS01250 PF00563 EAL domain LJF99_RS01250 PF03707 Bacterial signalling protein N terminal repeat LJF99_RS01250 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS01255 PF00483 Nucleotidyl transferase LJF99_RS01265 PF07273 Protein of unknown function (DUF1439) LJF99_RS01270 PF00425 chorismate binding enzyme LJF99_RS01275 PF00501 AMP-binding enzyme LJF99_RS01275 PF13193 AMP-binding enzyme C-terminal domain LJF99_RS01280 PF00857 Isochorismatase family LJF99_RS01280 PF00550 Phosphopantetheine attachment site LJF99_RS01285 PF00501 AMP-binding enzyme LJF99_RS01285 PF00550 Phosphopantetheine attachment site LJF99_RS01285 PF00975 Thioesterase domain LJF99_RS01285 PF13193 AMP-binding enzyme C-terminal domain LJF99_RS01285 PF00668 Condensation domain LJF99_RS01295 PF07993 Male sterility protein LJF99_RS01295 PF00668 Condensation domain LJF99_RS01295 PF00501 AMP-binding enzyme LJF99_RS01295 PF00550 Phosphopantetheine attachment site LJF99_RS01295 PF13193 AMP-binding enzyme C-terminal domain LJF99_RS01300 PF00109 Beta-ketoacyl synthase, N-terminal domain LJF99_RS01300 PF16197 Ketoacyl-synthetase C-terminal extension LJF99_RS01300 PF14765 Polyketide synthase dehydratase LJF99_RS01300 PF00550 Phosphopantetheine attachment site LJF99_RS01300 PF02801 Beta-ketoacyl synthase, C-terminal domain LJF99_RS01300 PF08659 KR domain LJF99_RS01300 PF00668 Condensation domain LJF99_RS01300 PF13193 AMP-binding enzyme C-terminal domain LJF99_RS01300 PF00501 AMP-binding enzyme LJF99_RS01305 PF01497 Periplasmic binding protein LJF99_RS01310 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LJF99_RS01310 PF01648 4'-phosphopantetheinyl transferase superfamily LJF99_RS01315 PF00005 ABC transporter LJF99_RS01320 PF01032 FecCD transport family LJF99_RS01325 PF01032 FecCD transport family LJF99_RS01330 PF00593 TonB dependent receptor LJF99_RS01330 PF07715 TonB-dependent Receptor Plug Domain LJF99_RS01345 PF11143 Protein of unknown function (DUF2919) LJF99_RS01350 PF01544 CorA-like Mg2+ transporter protein LJF99_RS01360 PF01012 Electron transfer flavoprotein domain LJF99_RS01365 PF01012 Electron transfer flavoprotein domain LJF99_RS01365 PF00766 Electron transfer flavoprotein FAD-binding domain LJF99_RS01370 PF00266 Aminotransferase class-V LJF99_RS01375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LJF99_RS01380 PF00793 DAHP synthetase I family LJF99_RS01390 PF04055 Radical SAM superfamily LJF99_RS01395 PF02601 Exonuclease VII, large subunit LJF99_RS01395 PF13742 OB-fold nucleic acid binding domain LJF99_RS01400 PF01292 Prokaryotic cytochrome b561 LJF99_RS01405 PF02472 Biopolymer transport protein ExbD/TolR LJF99_RS01410 PF01618 MotA/TolQ/ExbB proton channel family LJF99_RS01420 PF00571 CBS domain LJF99_RS01420 PF00478 IMP dehydrogenase / GMP reductase domain LJF99_RS01425 PF00117 Glutamine amidotransferase class-I LJF99_RS01425 PF00958 GMP synthase C terminal domain LJF99_RS01425 PF02540 NAD synthase LJF99_RS01455 PF05724 Thiopurine S-methyltransferase (TPMT) LJF99_RS01460 PF16187 Middle or third domain of peptidase_M16 LJF99_RS01460 PF00675 Insulinase (Peptidase family M16) LJF99_RS01460 PF05193 Peptidase M16 inactive domain LJF99_RS01465 PF00300 Histidine phosphatase superfamily (branch 1) LJF99_RS01475 PF00892 EamA-like transporter family LJF99_RS01480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LJF99_RS01485 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LJF99_RS01490 PF00271 Helicase conserved C-terminal domain LJF99_RS01490 PF00270 DEAD/DEAH box helicase LJF99_RS01490 PF03461 TRCF domain LJF99_RS01490 PF02559 CarD-like/TRCF domain LJF99_RS01490 PF17757 UvrB interaction domain LJF99_RS01500 PF12704 MacB-like periplasmic core domain LJF99_RS01500 PF02687 FtsX-like permease family LJF99_RS01505 PF00005 ABC transporter LJF99_RS01510 PF02687 FtsX-like permease family LJF99_RS01510 PF12704 MacB-like periplasmic core domain LJF99_RS01525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LJF99_RS01525 PF05698 Bacterial trigger factor protein (TF) C-terminus LJF99_RS01525 PF05697 Bacterial trigger factor protein (TF) LJF99_RS01530 PF00574 Clp protease LJF99_RS01535 PF10431 C-terminal, D2-small domain, of ClpB protein LJF99_RS01535 PF07724 AAA domain (Cdc48 subfamily) LJF99_RS01535 PF06689 ClpX C4-type zinc finger LJF99_RS01540 PF05362 Lon protease (S16) C-terminal proteolytic domain LJF99_RS01540 PF02190 ATP-dependent protease La (LON) substrate-binding domain LJF99_RS01540 PF00004 ATPase family associated with various cellular activities (AAA) LJF99_RS01545 PF00216 Bacterial DNA-binding protein LJF99_RS01550 PF13145 PPIC-type PPIASE domain LJF99_RS01555 PF00005 ABC transporter LJF99_RS01555 PF12848 ABC transporter LJF99_RS01560 PF00474 Sodium:solute symporter family LJF99_RS01565 PF04341 Protein of unknown function, DUF485 LJF99_RS01580 PF00378 Enoyl-CoA hydratase/isomerase LJF99_RS01580 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LJF99_RS01580 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LJF99_RS01585 PF01235 Sodium:alanine symporter family LJF99_RS01590 PF00583 Acetyltransferase (GNAT) family LJF99_RS01600 PF01184 GPR1/FUN34/yaaH family LJF99_RS01615 PF00376 MerR family regulatory protein LJF99_RS01615 PF09278 MerR, DNA binding LJF99_RS01620 PF00682 HMGL-like LJF99_RS01625 PF02785 Biotin carboxylase C-terminal domain LJF99_RS01625 PF00289 Biotin carboxylase, N-terminal domain LJF99_RS01625 PF00364 Biotin-requiring enzyme LJF99_RS01625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LJF99_RS01630 PF00378 Enoyl-CoA hydratase/isomerase LJF99_RS01635 PF01039 Carboxyl transferase domain LJF99_RS01640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LJF99_RS01640 PF02770 Acyl-CoA dehydrogenase, middle domain LJF99_RS01640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LJF99_RS01645 PF00171 Aldehyde dehydrogenase family LJF99_RS01650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LJF99_RS01650 PF02770 Acyl-CoA dehydrogenase, middle domain LJF99_RS01650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LJF99_RS01655 PF00378 Enoyl-CoA hydratase/isomerase LJF99_RS01660 PF00378 Enoyl-CoA hydratase/isomerase LJF99_RS01665 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LJF99_RS01665 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LJF99_RS01675 PF13520 Amino acid permease LJF99_RS01680 PF01925 Sulfite exporter TauE/SafE LJF99_RS01715 PF13358 DDE superfamily endonuclease LJF99_RS01715 PF13592 Winged helix-turn helix LJF99_RS01735 PF08448 PAS fold LJF99_RS01735 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS01740 PF01713 Smr domain LJF99_RS01745 PF05175 Methyltransferase small domain LJF99_RS01750 PF01264 Chorismate synthase LJF99_RS01760 PF00270 DEAD/DEAH box helicase LJF99_RS01760 PF00271 Helicase conserved C-terminal domain LJF99_RS01775 PF03222 Tryptophan/tyrosine permease family LJF99_RS01780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LJF99_RS01780 PF00356 Bacterial regulatory proteins, lacI family LJF99_RS01785 PF00381 PTS HPr component phosphorylation site LJF99_RS01785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LJF99_RS01790 PF00294 pfkB family carbohydrate kinase LJF99_RS01795 PF02378 Phosphotransferase system, EIIC LJF99_RS01795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LJF99_RS01800 PF06945 Protein of unknown function (DUF1289) LJF99_RS01805 PF06725 3D domain LJF99_RS01805 PF03562 MltA specific insert domain LJF99_RS01810 PF00111 2Fe-2S iron-sulfur cluster binding domain LJF99_RS01815 PF00268 Ribonucleotide reductase, small chain LJF99_RS01820 PF00317 Ribonucleotide reductase, all-alpha domain LJF99_RS01820 PF03477 ATP cone domain LJF99_RS01820 PF02867 Ribonucleotide reductase, barrel domain LJF99_RS01825 PF13419 Haloacid dehalogenase-like hydrolase LJF99_RS01835 PF03989 DNA gyrase C-terminal domain, beta-propeller LJF99_RS01835 PF00521 DNA gyrase/topoisomerase IV, subunit A LJF99_RS01845 PF04055 Radical SAM superfamily LJF99_RS01855 PF03129 Anticodon binding domain LJF99_RS01855 PF02824 TGS domain LJF99_RS01855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LJF99_RS01855 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LJF99_RS01860 PF00707 Translation initiation factor IF-3, C-terminal domain LJF99_RS01860 PF05198 Translation initiation factor IF-3, N-terminal domain LJF99_RS01865 PF01632 Ribosomal protein L35 LJF99_RS01870 PF00453 Ribosomal protein L20 LJF99_RS01875 PF01409 tRNA synthetases class II core domain (F) LJF99_RS01875 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LJF99_RS01880 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LJF99_RS01880 PF03483 B3/4 domain LJF99_RS01880 PF03147 Ferredoxin-fold anticodon binding domain LJF99_RS01880 PF01588 Putative tRNA binding domain LJF99_RS01880 PF03484 tRNA synthetase B5 domain LJF99_RS01885 PF00216 Bacterial DNA-binding protein LJF99_RS01905 PF02146 Sir2 family LJF99_RS01915 PF17152 Periplasmic sensor domain LJF99_RS01915 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS01920 PF00356 Bacterial regulatory proteins, lacI family LJF99_RS01925 PF00294 pfkB family carbohydrate kinase LJF99_RS01930 PF13407 Periplasmic binding protein domain LJF99_RS01935 PF02653 Branched-chain amino acid transport system / permease component LJF99_RS01945 PF05025 RbsD / FucU transport protein family LJF99_RS01950 PF02798 Glutathione S-transferase, N-terminal domain LJF99_RS01950 PF00043 Glutathione S-transferase, C-terminal domain LJF99_RS01965 PF01171 PP-loop family LJF99_RS01970 PF00582 Universal stress protein family LJF99_RS01975 PF00027 Cyclic nucleotide-binding domain LJF99_RS01975 PF13545 Crp-like helix-turn-helix domain LJF99_RS01990 PF00403 Heavy-metal-associated domain LJF99_RS02000 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LJF99_RS02000 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LJF99_RS02015 PF00115 Cytochrome C and Quinol oxidase polypeptide I LJF99_RS02025 PF13185 GAF domain LJF99_RS02030 PF04352 ProQ/FINO family LJF99_RS02030 PF17516 ProQ C-terminal domain LJF99_RS02035 PF11818 C-terminal domain of tail specific protease (DUF3340) LJF99_RS02035 PF03572 Peptidase family S41 LJF99_RS02035 PF17804 Tail specific protease N-terminal domain LJF99_RS02035 PF00595 PDZ domain LJF99_RS02040 PF01433 Peptidase family M1 domain LJF99_RS02040 PF11940 Domain of unknown function (DUF3458) Ig-like fold LJF99_RS02040 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LJF99_RS02050 PF05088 Bacterial NAD-glutamate dehydrogenase LJF99_RS02055 PF01180 Dihydroorotate dehydrogenase LJF99_RS02060 PF07126 Cell-division protein ZapC LJF99_RS02065 PF01170 Putative RNA methylase family UPF0020 LJF99_RS02065 PF02926 THUMP domain LJF99_RS02065 PF10672 S-adenosylmethionine-dependent methyltransferase LJF99_RS02075 PF16326 ABC transporter C-terminal domain LJF99_RS02075 PF00005 ABC transporter LJF99_RS02075 PF12848 ABC transporter LJF99_RS02085 PF04957 Ribosome modulation factor LJF99_RS02090 PF07977 FabA-like domain LJF99_RS02095 PF13654 AAA domain LJF99_RS02095 PF05362 Lon protease (S16) C-terminal proteolytic domain LJF99_RS02110 PF05707 Zonular occludens toxin (Zot) LJF99_RS02125 PF00665 Integrase core domain LJF99_RS02130 PF01695 IstB-like ATP binding protein LJF99_RS02200 PF00106 short chain dehydrogenase LJF99_RS02225 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LJF99_RS02225 PF06974 Protein of unknown function (DUF1298) LJF99_RS02240 PF03972 MmgE/PrpD family LJF99_RS02260 PF04403 Paraquat-inducible protein A LJF99_RS02270 PF01189 16S rRNA methyltransferase RsmB/F LJF99_RS02270 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LJF99_RS02270 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF LJF99_RS02285 PF01026 TatD related DNase LJF99_RS02290 PF09115 DNA polymerase III, delta subunit, C terminal LJF99_RS02295 PF02223 Thymidylate kinase LJF99_RS02300 PF02618 YceG-like family LJF99_RS02305 PF01063 Amino-transferase class IV LJF99_RS02310 PF02801 Beta-ketoacyl synthase, C-terminal domain LJF99_RS02310 PF00109 Beta-ketoacyl synthase, N-terminal domain LJF99_RS02315 PF00550 Phosphopantetheine attachment site LJF99_RS02325 PF00698 Acyl transferase domain LJF99_RS02330 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LJF99_RS02330 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LJF99_RS02335 PF02504 Fatty acid synthesis protein LJF99_RS02340 PF01783 Ribosomal L32p protein family LJF99_RS02345 PF02620 Large ribosomal RNA subunit accumulation protein YceD LJF99_RS02350 PF02545 Maf-like protein LJF99_RS02355 PF13419 Haloacid dehalogenase-like hydrolase LJF99_RS02360 PF00849 RNA pseudouridylate synthase LJF99_RS02360 PF01479 S4 domain LJF99_RS02365 PF12111 Polyribonucleotide phosphorylase C terminal LJF99_RS02365 PF10150 Ribonuclease E/G family LJF99_RS02365 PF00575 S1 RNA binding domain LJF99_RS02370 PF01384 Phosphate transporter family LJF99_RS02375 PF00692 dUTPase LJF99_RS02380 PF00485 Phosphoribulokinase / Uridine kinase family LJF99_RS02385 PF10609 NUBPL iron-transfer P-loop NTPase LJF99_RS02390 PF08264 Anticodon-binding domain of tRNA LJF99_RS02390 PF09334 tRNA synthetases class I (M) LJF99_RS02390 PF01588 Putative tRNA binding domain LJF99_RS02395 PF00043 Glutathione S-transferase, C-terminal domain LJF99_RS02395 PF02798 Glutathione S-transferase, N-terminal domain LJF99_RS02400 PF00708 Acylphosphatase LJF99_RS02405 PF12729 Four helix bundle sensory module for signal transduction LJF99_RS02405 PF00672 HAMP domain LJF99_RS02405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS02410 PF10672 S-adenosylmethionine-dependent methyltransferase LJF99_RS02410 PF17785 PUA-like domain LJF99_RS02425 PF02769 AIR synthase related protein, C-terminal domain LJF99_RS02425 PF00586 AIR synthase related protein, N-terminal domain LJF99_RS02435 PF00753 Metallo-beta-lactamase superfamily LJF99_RS02440 PF01386 Ribosomal L25p family LJF99_RS02450 PF00270 DEAD/DEAH box helicase LJF99_RS02450 PF11898 Domain of unknown function (DUF3418) LJF99_RS02450 PF04408 Helicase associated domain (HA2) LJF99_RS02450 PF00271 Helicase conserved C-terminal domain LJF99_RS02450 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LJF99_RS02455 PF01368 DHH family LJF99_RS02455 PF00571 CBS domain LJF99_RS02455 PF01743 Poly A polymerase head domain LJF99_RS02455 PF02272 DHHA1 domain LJF99_RS02460 PF00196 Bacterial regulatory proteins, luxR family LJF99_RS02460 PF00072 Response regulator receiver domain LJF99_RS02465 PF07670 Nucleoside recognition LJF99_RS02470 PF02575 YbaB/EbfC DNA-binding family LJF99_RS02475 PF12170 DNA polymerase III tau subunit V interacting with alpha LJF99_RS02475 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LJF99_RS02475 PF12169 DNA polymerase III subunits gamma and tau domain III LJF99_RS02480 PF00156 Phosphoribosyl transferase domain LJF99_RS02485 PF04304 Protein of unknown function (DUF454) LJF99_RS02490 PF01207 Dihydrouridine synthase (Dus) LJF99_RS02505 PF01612 3'-5' exonuclease LJF99_RS02505 PF00570 HRDC domain LJF99_RS02510 PF00501 AMP-binding enzyme LJF99_RS02510 PF13193 AMP-binding enzyme C-terminal domain LJF99_RS02515 PF12697 Alpha/beta hydrolase family LJF99_RS02525 PF00814 Glycoprotease family LJF99_RS02530 PF13307 Helicase C-terminal domain LJF99_RS02530 PF04851 Type III restriction enzyme, res subunit LJF99_RS02540 PF08029 HisG, C-terminal domain LJF99_RS02540 PF01634 ATP phosphoribosyltransferase LJF99_RS02545 PF00815 Histidinol dehydrogenase LJF99_RS02550 PF00155 Aminotransferase class I and II LJF99_RS02555 PF08645 Polynucleotide kinase 3 phosphatase LJF99_RS02555 PF00475 Imidazoleglycerol-phosphate dehydratase LJF99_RS02560 PF00117 Glutamine amidotransferase class-I LJF99_RS02565 PF00977 Histidine biosynthesis protein LJF99_RS02570 PF00072 Response regulator receiver domain LJF99_RS02575 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS02575 PF08448 PAS fold LJF99_RS02580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS02580 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS02580 PF01627 Hpt domain LJF99_RS02580 PF00072 Response regulator receiver domain LJF99_RS02585 PF00977 Histidine biosynthesis protein LJF99_RS02590 PF01502 Phosphoribosyl-AMP cyclohydrolase LJF99_RS02590 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LJF99_RS02600 PF08279 HTH domain LJF99_RS02600 PF13280 WYL domain LJF99_RS02605 PF00501 AMP-binding enzyme LJF99_RS02605 PF13193 AMP-binding enzyme C-terminal domain LJF99_RS02630 PF01338 Bacillus thuringiensis toxin LJF99_RS02655 PF04972 BON domain LJF99_RS02660 PF00563 EAL domain LJF99_RS02660 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS02660 PF00360 Phytochrome region LJF99_RS02660 PF01590 GAF domain LJF99_RS02665 PF02653 Branched-chain amino acid transport system / permease component LJF99_RS02670 PF02653 Branched-chain amino acid transport system / permease component LJF99_RS02675 PF00005 ABC transporter LJF99_RS02680 PF13407 Periplasmic binding protein domain LJF99_RS02685 PF13592 Winged helix-turn helix LJF99_RS02685 PF13358 DDE superfamily endonuclease LJF99_RS02690 PF08329 Chitinase A, N-terminal domain LJF99_RS02690 PF00704 Glycosyl hydrolases family 18 LJF99_RS02700 PF03831 PhnA domain LJF99_RS02700 PF08274 PhnA Zinc-Ribbon LJF99_RS02705 PF00378 Enoyl-CoA hydratase/isomerase LJF99_RS02705 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LJF99_RS02705 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LJF99_RS02710 PF02803 Thiolase, C-terminal domain LJF99_RS02710 PF00108 Thiolase, N-terminal domain LJF99_RS02715 PF17863 AAA lid domain LJF99_RS02715 PF07726 ATPase family associated with various cellular activities (AAA) LJF99_RS02720 PF01882 Protein of unknown function DUF58 LJF99_RS02730 PF07728 AAA domain (dynein-related subfamily) LJF99_RS02730 PF17863 AAA lid domain LJF99_RS02730 PF13519 von Willebrand factor type A domain LJF99_RS02745 PF04545 Sigma-70, region 4 LJF99_RS02745 PF04542 Sigma-70 region 2 LJF99_RS02755 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LJF99_RS02760 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LJF99_RS02765 PF08668 HDOD domain LJF99_RS02765 PF00563 EAL domain LJF99_RS02770 PF00108 Thiolase, N-terminal domain LJF99_RS02770 PF02803 Thiolase, C-terminal domain LJF99_RS02775 PF09278 MerR, DNA binding LJF99_RS02775 PF00376 MerR family regulatory protein LJF99_RS02780 PF00375 Sodium:dicarboxylate symporter family LJF99_RS02785 PF06865 Pyrimidine/purine nucleoside phosphorylase LJF99_RS02790 PF03313 Serine dehydratase alpha chain LJF99_RS02790 PF03315 Serine dehydratase beta chain LJF99_RS02795 PF03313 Serine dehydratase alpha chain LJF99_RS02795 PF03315 Serine dehydratase beta chain LJF99_RS02800 PF13406 Transglycosylase SLT domain LJF99_RS02805 PF05166 YcgL domain LJF99_RS02810 PF03775 Septum formation inhibitor MinC, C-terminal domain LJF99_RS02810 PF05209 Septum formation inhibitor MinC, N-terminal domain LJF99_RS02815 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LJF99_RS02820 PF03776 Septum formation topological specificity factor MinE LJF99_RS02825 PF04269 Protein of unknown function, DUF440 LJF99_RS02830 PF00912 Transglycosylase LJF99_RS02840 PF04269 Protein of unknown function, DUF440 LJF99_RS02850 PF17783 CvfB-like winged helix domain LJF99_RS02850 PF13509 S1 domain LJF99_RS02875 PF02525 Flavodoxin-like fold LJF99_RS02880 PF00892 EamA-like transporter family LJF99_RS02885 PF02222 ATP-grasp domain LJF99_RS02890 PF13419 Haloacid dehalogenase-like hydrolase LJF99_RS02900 PF00677 Lumazine binding domain LJF99_RS02905 PF06786 Uncharacterised protein family (UPF0253) LJF99_RS02910 PF01554 MatE LJF99_RS02935 PF00136 DNA polymerase family B LJF99_RS02935 PF03104 DNA polymerase family B, exonuclease domain LJF99_RS02945 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS02960 PF03279 Bacterial lipid A biosynthesis acyltransferase LJF99_RS02965 PF03279 Bacterial lipid A biosynthesis acyltransferase LJF99_RS02975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS02975 PF03466 LysR substrate binding domain LJF99_RS02980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LJF99_RS02980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LJF99_RS02985 PF01261 Xylose isomerase-like TIM barrel LJF99_RS02990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS02990 PF03466 LysR substrate binding domain LJF99_RS03005 PF03606 C4-dicarboxylate anaerobic carrier LJF99_RS03015 PF05433 Glycine zipper 2TM domain LJF99_RS03035 PF01032 FecCD transport family LJF99_RS03040 PF00005 ABC transporter LJF99_RS03045 PF07690 Major Facilitator Superfamily LJF99_RS03055 PF07152 YaeQ protein LJF99_RS03115 PF03330 Lytic transglycolase LJF99_RS03115 PF05036 Sporulation related domain LJF99_RS03120 PF16330 MukB hinge domain LJF99_RS03120 PF04310 MukB N-terminal LJF99_RS03125 PF04288 MukE-like family LJF99_RS03130 PF03882 MukF winged-helix domain LJF99_RS03130 PF17193 MukF C-terminal domain LJF99_RS03130 PF17192 MukF middle domain LJF99_RS03135 PF13847 Methyltransferase domain LJF99_RS03140 PF02698 DUF218 domain LJF99_RS03145 PF00121 Triosephosphate isomerase LJF99_RS03150 PF00365 Phosphofructokinase LJF99_RS03170 PF13592 Winged helix-turn helix LJF99_RS03170 PF13358 DDE superfamily endonuclease LJF99_RS03200 PF13419 Haloacid dehalogenase-like hydrolase LJF99_RS03205 PF02789 Cytosol aminopeptidase family, N-terminal domain LJF99_RS03205 PF00883 Cytosol aminopeptidase family, catalytic domain LJF99_RS03235 PF13358 DDE superfamily endonuclease LJF99_RS03235 PF13592 Winged helix-turn helix LJF99_RS03245 PF11398 Protein of unknown function (DUF2813) LJF99_RS03250 PF12833 Helix-turn-helix domain LJF99_RS03250 PF14525 AraC-binding-like domain LJF99_RS03260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS03260 PF03466 LysR substrate binding domain LJF99_RS03265 PF01925 Sulfite exporter TauE/SafE LJF99_RS03270 PF03942 DTW domain LJF99_RS03280 PF07478 D-ala D-ala ligase C-terminus LJF99_RS03280 PF01820 D-ala D-ala ligase N-terminus LJF99_RS03290 PF00255 Glutathione peroxidase LJF99_RS03295 PF00271 Helicase conserved C-terminal domain LJF99_RS03295 PF00270 DEAD/DEAH box helicase LJF99_RS03300 PF13673 Acetyltransferase (GNAT) domain LJF99_RS03310 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LJF99_RS03325 PF01928 CYTH domain LJF99_RS03345 PF00465 Iron-containing alcohol dehydrogenase LJF99_RS03350 PF03992 Antibiotic biosynthesis monooxygenase LJF99_RS03355 PF08543 Phosphomethylpyrimidine kinase LJF99_RS03375 PF00561 alpha/beta hydrolase fold LJF99_RS03375 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus LJF99_RS03380 PF01575 MaoC like domain LJF99_RS03395 PF00005 ABC transporter LJF99_RS03395 PF00664 ABC transporter transmembrane region LJF99_RS03405 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LJF99_RS03405 PF00072 Response regulator receiver domain LJF99_RS03405 PF01627 Hpt domain LJF99_RS03405 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS03405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS03405 PF00672 HAMP domain LJF99_RS03410 PF00085 Thioredoxin LJF99_RS03415 PF00939 Sodium:sulfate symporter transmembrane region LJF99_RS03420 PF00343 Carbohydrate phosphorylase LJF99_RS03445 PF00425 chorismate binding enzyme LJF99_RS03445 PF04715 Anthranilate synthase component I, N terminal region LJF99_RS03450 PF00293 NUDIX domain LJF99_RS03455 PF03222 Tryptophan/tyrosine permease family LJF99_RS03460 PF00375 Sodium:dicarboxylate symporter family LJF99_RS03465 PF00570 HRDC domain LJF99_RS03465 PF00271 Helicase conserved C-terminal domain LJF99_RS03465 PF16124 RecQ zinc-binding LJF99_RS03465 PF09382 RQC domain LJF99_RS03465 PF00270 DEAD/DEAH box helicase LJF99_RS03470 PF06798 PrkA serine protein kinase C-terminal domain LJF99_RS03470 PF08298 PrkA AAA domain LJF99_RS03475 PF04285 Protein of unknown function (DUF444) LJF99_RS03480 PF04293 SpoVR like protein LJF99_RS03485 PF00392 Bacterial regulatory proteins, gntR family LJF99_RS03485 PF07840 FadR C-terminal domain LJF99_RS03490 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LJF99_RS03495 PF02600 Disulfide bond formation protein DsbB LJF99_RS03500 PF09335 SNARE associated Golgi protein LJF99_RS03510 PF00271 Helicase conserved C-terminal domain LJF99_RS03510 PF04851 Type III restriction enzyme, res subunit LJF99_RS03510 PF02151 UvrB/uvrC motif LJF99_RS03510 PF17757 UvrB interaction domain LJF99_RS03510 PF12344 Ultra-violet resistance protein B LJF99_RS03520 PF06826 Predicted Permease Membrane Region LJF99_RS03520 PF02080 TrkA-C domain LJF99_RS03525 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJF99_RS03525 PF01464 Transglycosylase SLT domain LJF99_RS03540 PF01970 Tripartite tricarboxylate transporter TctA family LJF99_RS03545 PF08279 HTH domain LJF99_RS03545 PF00072 Response regulator receiver domain LJF99_RS03545 PF12431 Transcriptional regulator LJF99_RS03550 PF00989 PAS fold LJF99_RS03550 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LJF99_RS03550 PF17203 Single cache domain 3 LJF99_RS03550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS03555 PF01047 MarR family LJF99_RS03555 PF00480 ROK family LJF99_RS03560 PF00672 HAMP domain LJF99_RS03560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS03560 PF17200 Single Cache domain 2 LJF99_RS03565 PF02810 SEC-C motif LJF99_RS03570 PF01266 FAD dependent oxidoreductase LJF99_RS03570 PF04324 BFD-like [2Fe-2S] binding domain LJF99_RS03575 PF00890 FAD binding domain LJF99_RS03580 PF13183 4Fe-4S dicluster domain LJF99_RS03580 PF02754 Cysteine-rich domain LJF99_RS03585 PF02335 Cytochrome c552 LJF99_RS03590 PF13435 Cytochrome c554 and c-prime LJF99_RS03590 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) LJF99_RS03595 PF00037 4Fe-4S binding domain LJF99_RS03595 PF13247 4Fe-4S dicluster domain LJF99_RS03600 PF03916 Polysulphide reductase, NrfD LJF99_RS03605 PF01578 Cytochrome C assembly protein LJF99_RS03605 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LJF99_RS03610 PF08534 Redoxin LJF99_RS03615 PF03918 Cytochrome C biogenesis protein LJF99_RS03625 PF00768 D-alanyl-D-alanine carboxypeptidase LJF99_RS03630 PF01212 Beta-eliminating lyase LJF99_RS03640 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LJF99_RS03645 PF01266 FAD dependent oxidoreductase LJF99_RS03655 PF07969 Amidohydrolase family LJF99_RS03670 PF01717 Cobalamin-independent synthase, Catalytic domain LJF99_RS03670 PF08267 Cobalamin-independent synthase, N-terminal domain LJF99_RS03675 PF03466 LysR substrate binding domain LJF99_RS03675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS03685 PF07715 TonB-dependent Receptor Plug Domain LJF99_RS03685 PF00593 TonB dependent receptor LJF99_RS03690 PF06445 GyrI-like small molecule binding domain LJF99_RS03690 PF12833 Helix-turn-helix domain LJF99_RS03695 PF00106 short chain dehydrogenase LJF99_RS03700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS03700 PF03466 LysR substrate binding domain LJF99_RS03705 PF13460 NAD(P)H-binding LJF99_RS03715 PF01053 Cys/Met metabolism PLP-dependent enzyme LJF99_RS03720 PF05193 Peptidase M16 inactive domain LJF99_RS03720 PF00675 Insulinase (Peptidase family M16) LJF99_RS03725 PF02774 Semialdehyde dehydrogenase, dimerisation domain LJF99_RS03725 PF01118 Semialdehyde dehydrogenase, NAD binding domain LJF99_RS03730 PF18381 YcaO cyclodehydratase C-terminal domain LJF99_RS03730 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LJF99_RS03735 PF01226 Formate/nitrite transporter LJF99_RS03740 PF01228 Glycine radical LJF99_RS03740 PF02901 Pyruvate formate lyase-like LJF99_RS03745 PF03692 Putative zinc- or iron-chelating domain LJF99_RS03750 PF02629 CoA binding domain LJF99_RS03750 PF00549 CoA-ligase LJF99_RS03755 PF00549 CoA-ligase LJF99_RS03755 PF08442 ATP-grasp domain LJF99_RS03760 PF02817 e3 binding domain LJF99_RS03760 PF00364 Biotin-requiring enzyme LJF99_RS03760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LJF99_RS03765 PF00676 Dehydrogenase E1 component LJF99_RS03765 PF02779 Transketolase, pyrimidine binding domain LJF99_RS03765 PF16870 2-oxoglutarate dehydrogenase C-terminal LJF99_RS03765 PF16078 2-oxoglutarate dehydrogenase N-terminus LJF99_RS03770 PF13085 2Fe-2S iron-sulfur cluster binding domain LJF99_RS03775 PF02910 Fumarate reductase flavoprotein C-term LJF99_RS03775 PF00890 FAD binding domain LJF99_RS03780 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LJF99_RS03785 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LJF99_RS03790 PF00285 Citrate synthase, C-terminal domain LJF99_RS03805 PF02801 Beta-ketoacyl synthase, C-terminal domain LJF99_RS03805 PF00109 Beta-ketoacyl synthase, N-terminal domain LJF99_RS03810 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LJF99_RS03810 PF01266 FAD dependent oxidoreductase LJF99_RS03820 PF03606 C4-dicarboxylate anaerobic carrier LJF99_RS03835 PF01863 Protein of unknown function DUF45 LJF99_RS03850 PF01197 Ribosomal protein L31 LJF99_RS03855 PF00444 Ribosomal protein L36 LJF99_RS03860 PF00224 Pyruvate kinase, barrel domain LJF99_RS03860 PF02887 Pyruvate kinase, alpha/beta domain LJF99_RS03865 PF00367 phosphotransferase system, EIIB LJF99_RS03865 PF02378 Phosphotransferase system, EIIC LJF99_RS03870 PF08533 Beta-galactosidase C-terminal domain LJF99_RS03870 PF02449 Beta-galactosidase LJF99_RS03870 PF08532 Beta-galactosidase trimerisation domain LJF99_RS03875 PF07745 Glycosyl hydrolase family 53 LJF99_RS03880 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS03885 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS03890 PF13416 Bacterial extracellular solute-binding protein LJF99_RS03915 PF00672 HAMP domain LJF99_RS03915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS03915 PF12729 Four helix bundle sensory module for signal transduction LJF99_RS03925 PF07745 Glycosyl hydrolase family 53 LJF99_RS03930 PF07745 Glycosyl hydrolase family 53 LJF99_RS03935 PF02264 LamB porin LJF99_RS03940 PF00356 Bacterial regulatory proteins, lacI family LJF99_RS03945 PF16363 GDP-mannose 4,6 dehydratase LJF99_RS03950 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LJF99_RS03950 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LJF99_RS03955 PF10509 Galactokinase galactose-binding signature LJF99_RS03955 PF08544 GHMP kinases C terminal LJF99_RS03955 PF00288 GHMP kinases N terminal domain LJF99_RS03960 PF02311 AraC-like ligand binding domain LJF99_RS03960 PF12833 Helix-turn-helix domain LJF99_RS03965 PF02653 Branched-chain amino acid transport system / permease component LJF99_RS03970 PF00005 ABC transporter LJF99_RS03975 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LJF99_RS03980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LJF99_RS03985 PF00596 Class II Aldolase and Adducin N-terminal domain LJF99_RS03990 PF02610 L-arabinose isomerase LJF99_RS03990 PF11762 L-arabinose isomerase C-terminal domain LJF99_RS03995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS03995 PF03466 LysR substrate binding domain LJF99_RS04005 PF00795 Carbon-nitrogen hydrolase LJF99_RS04010 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJF99_RS04020 PF08411 Exonuclease C-terminal LJF99_RS04020 PF00929 Exonuclease LJF99_RS04035 PF03788 LrgA family LJF99_RS04040 PF04172 LrgB-like family LJF99_RS04045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LJF99_RS04045 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LJF99_RS04050 PF00501 AMP-binding enzyme LJF99_RS04055 PF08891 YfcL protein LJF99_RS04065 PF03741 Integral membrane protein TerC family LJF99_RS04070 PF00691 OmpA family LJF99_RS04075 PF17152 Periplasmic sensor domain LJF99_RS04075 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS04080 PF13689 YfiR/HmsC-like LJF99_RS04085 PF18024 Helix-turn-helix domain LJF99_RS04085 PF00158 Sigma-54 interaction domain LJF99_RS04090 PF01329 Pterin 4 alpha carbinolamine dehydratase LJF99_RS04095 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LJF99_RS04100 PF05128 Domain of unknown function (DUF697) LJF99_RS04105 PF04317 YcjX-like family, DUF463 LJF99_RS04115 PF06667 Phage shock protein B LJF99_RS04120 PF04012 PspA/IM30 family LJF99_RS04125 PF00158 Sigma-54 interaction domain LJF99_RS04125 PF02954 Bacterial regulatory protein, Fis family LJF99_RS04130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LJF99_RS04135 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS04140 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS04140 PF12911 N-terminal TM domain of oligopeptide transport permease C LJF99_RS04145 PF00005 ABC transporter LJF99_RS04145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LJF99_RS04150 PF00005 ABC transporter LJF99_RS04160 PF00156 Phosphoribosyl transferase domain LJF99_RS04165 PF02674 Colicin V production protein LJF99_RS04170 PF02403 Seryl-tRNA synthetase N-terminal domain LJF99_RS04170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LJF99_RS04175 PF12002 MgsA AAA+ ATPase C terminal LJF99_RS04175 PF00004 ATPase family associated with various cellular activities (AAA) LJF99_RS04175 PF16193 AAA C-terminal domain LJF99_RS04180 PF03548 Outer membrane lipoprotein carrier protein LolA LJF99_RS04185 PF09397 Ftsk gamma domain LJF99_RS04185 PF01580 FtsK/SpoIIIE family LJF99_RS04185 PF17854 FtsK alpha domain LJF99_RS04185 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LJF99_RS04190 PF01037 Lrp/AsnC ligand binding domain LJF99_RS04205 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJF99_RS04210 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS04210 PF17158 Membrane-associated sensor, integral membrane domain LJF99_RS04215 PF05433 Glycine zipper 2TM domain LJF99_RS04220 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LJF99_RS04225 PF04377 Arginine-tRNA-protein transferase, C terminus LJF99_RS04225 PF04376 Arginine-tRNA-protein transferase, N terminus LJF99_RS04230 PF01176 Translation initiation factor 1A / IF-1 LJF99_RS04235 PF02861 Clp amino terminal domain, pathogenicity island component LJF99_RS04235 PF17871 AAA lid domain LJF99_RS04235 PF07724 AAA domain (Cdc48 subfamily) LJF99_RS04235 PF10431 C-terminal, D2-small domain, of ClpB protein LJF99_RS04235 PF00004 ATPase family associated with various cellular activities (AAA) LJF99_RS04240 PF02617 ATP-dependent Clp protease adaptor protein ClpS LJF99_RS04245 PF00313 'Cold-shock' DNA-binding domain LJF99_RS04250 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LJF99_RS04250 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LJF99_RS04300 PF06744 Type VI secretion protein IcmF C-terminal LJF99_RS04300 PF14331 ImcF-related N-terminal domain LJF99_RS04300 PF06761 Intracellular multiplication and human macrophage-killing LJF99_RS04310 PF02954 Bacterial regulatory protein, Fis family LJF99_RS04310 PF00158 Sigma-54 interaction domain LJF99_RS04315 PF17871 AAA lid domain LJF99_RS04315 PF00004 ATPase family associated with various cellular activities (AAA) LJF99_RS04315 PF07724 AAA domain (Cdc48 subfamily) LJF99_RS04315 PF10431 C-terminal, D2-small domain, of ClpB protein LJF99_RS04325 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LJF99_RS04345 PF05947 Type VI secretion system, TssF LJF99_RS04380 PF01740 STAS domain LJF99_RS04380 PF00916 Sulfate permease family LJF99_RS04395 PF13358 DDE superfamily endonuclease LJF99_RS04395 PF13592 Winged helix-turn helix LJF99_RS04425 PF00892 EamA-like transporter family LJF99_RS04430 PF02508 Rnf-Nqr subunit, membrane protein LJF99_RS04435 PF04060 Putative Fe-S cluster LJF99_RS04440 PF13375 RnfC Barrel sandwich hybrid domain LJF99_RS04440 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LJF99_RS04440 PF12838 4Fe-4S dicluster domain LJF99_RS04440 PF10531 SLBB domain LJF99_RS04445 PF03116 NQR2, RnfD, RnfE family LJF99_RS04450 PF04205 FMN-binding domain LJF99_RS04455 PF02508 Rnf-Nqr subunit, membrane protein LJF99_RS04460 PF10576 Iron-sulfur binding domain of endonuclease III LJF99_RS04460 PF00633 Helix-hairpin-helix motif LJF99_RS04460 PF00730 HhH-GPD superfamily base excision DNA repair protein LJF99_RS04465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LJF99_RS04470 PF00691 OmpA family LJF99_RS04470 PF18393 MotY N-terminal domain LJF99_RS04475 PF12729 Four helix bundle sensory module for signal transduction LJF99_RS04475 PF00672 HAMP domain LJF99_RS04475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS04480 PF00929 Exonuclease LJF99_RS04485 PF13726 Na+-H+ antiporter family LJF99_RS04485 PF03553 Na+/H+ antiporter family LJF99_RS04490 PF00563 EAL domain LJF99_RS04490 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS04490 PF03707 Bacterial signalling protein N terminal repeat LJF99_RS04490 PF13188 PAS domain LJF99_RS04500 PF00270 DEAD/DEAH box helicase LJF99_RS04500 PF03880 DbpA RNA binding domain LJF99_RS04500 PF00271 Helicase conserved C-terminal domain LJF99_RS04505 PF03061 Thioesterase superfamily LJF99_RS04515 PF02913 FAD linked oxidases, C-terminal domain LJF99_RS04515 PF01565 FAD binding domain LJF99_RS04515 PF13183 4Fe-4S dicluster domain LJF99_RS04525 PF03471 Transporter associated domain LJF99_RS04525 PF03741 Integral membrane protein TerC family LJF99_RS04530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LJF99_RS04535 PF00962 Adenosine/AMP deaminase LJF99_RS04540 PF13344 Haloacid dehalogenase-like hydrolase LJF99_RS04545 PF00999 Sodium/hydrogen exchanger family LJF99_RS04545 PF02254 TrkA-N domain LJF99_RS04555 PF00733 Asparagine synthase LJF99_RS04555 PF13537 Glutamine amidotransferase domain LJF99_RS04560 PF03577 Peptidase family C69 LJF99_RS04565 PF13358 DDE superfamily endonuclease LJF99_RS04565 PF13592 Winged helix-turn helix LJF99_RS04575 PF00043 Glutathione S-transferase, C-terminal domain LJF99_RS04575 PF13417 Glutathione S-transferase, N-terminal domain LJF99_RS04580 PF14497 Glutathione S-transferase, C-terminal domain LJF99_RS04580 PF02798 Glutathione S-transferase, N-terminal domain LJF99_RS04595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LJF99_RS04605 PF00849 RNA pseudouridylate synthase LJF99_RS04615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS04615 PF08447 PAS fold LJF99_RS04625 PF01027 Inhibitor of apoptosis-promoting Bax1 LJF99_RS04630 PF12805 FUSC-like inner membrane protein yccS LJF99_RS04635 PF04358 DsrC like protein LJF99_RS04640 PF05036 Sporulation related domain LJF99_RS04645 PF02875 Mur ligase family, glutamate ligase domain LJF99_RS04645 PF08245 Mur ligase middle domain LJF99_RS04650 PF01039 Carboxyl transferase domain LJF99_RS04650 PF17848 Acetyl-coA carboxylase zinc finger domain LJF99_RS04655 PF01416 tRNA pseudouridine synthase LJF99_RS04665 PF02774 Semialdehyde dehydrogenase, dimerisation domain LJF99_RS04665 PF01118 Semialdehyde dehydrogenase, NAD binding domain LJF99_RS04670 PF11890 Domain of unknown function (DUF3410) LJF99_RS04670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LJF99_RS04670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LJF99_RS04675 PF01569 PAP2 superfamily LJF99_RS04680 PF03180 NLPA lipoprotein LJF99_RS04700 PF01483 Proprotein convertase P-domain LJF99_RS04700 PF00082 Subtilase family LJF99_RS04710 PF00933 Glycosyl hydrolase family 3 N terminal domain LJF99_RS04710 PF14310 Fibronectin type III-like domain LJF99_RS04710 PF01915 Glycosyl hydrolase family 3 C-terminal domain LJF99_RS04720 PF00391 PEP-utilising enzyme, mobile domain LJF99_RS04720 PF02896 PEP-utilising enzyme, TIM barrel domain LJF99_RS04720 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LJF99_RS04725 PF03618 Kinase/pyrophosphorylase LJF99_RS04735 PF00324 Amino acid permease LJF99_RS04765 PF03239 Iron permease FTR1 family LJF99_RS04770 PF01593 Flavin containing amine oxidoreductase LJF99_RS04795 PF03600 Citrate transporter LJF99_RS04810 PF12704 MacB-like periplasmic core domain LJF99_RS04810 PF02687 FtsX-like permease family LJF99_RS04825 PF02308 MgtC family LJF99_RS04865 PF01625 Peptide methionine sulfoxide reductase LJF99_RS04870 PF00583 Acetyltransferase (GNAT) family LJF99_RS04870 PF00696 Amino acid kinase family LJF99_RS04875 PF01842 ACT domain LJF99_RS04875 PF00696 Amino acid kinase family LJF99_RS04885 PF00884 Sulfatase LJF99_RS04890 PF02016 LD-carboxypeptidase N-terminal domain LJF99_RS04890 PF17676 LD-carboxypeptidase C-terminal domain LJF99_RS04900 PF01906 Putative heavy-metal-binding LJF99_RS04905 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJF99_RS04910 PF05728 Uncharacterised protein family (UPF0227) LJF99_RS04915 PF08439 Oligopeptidase F LJF99_RS04915 PF01432 Peptidase family M3 LJF99_RS04925 PF05661 Protein of unknown function (DUF808) LJF99_RS04935 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LJF99_RS04935 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LJF99_RS04935 PF02769 AIR synthase related protein, C-terminal domain LJF99_RS04940 PF01464 Transglycosylase SLT domain LJF99_RS04940 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJF99_RS04945 PF07191 zinc-ribbons LJF99_RS04950 PF01926 50S ribosome-binding GTPase LJF99_RS04950 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LJF99_RS04955 PF13360 PQQ-like domain LJF99_RS04960 PF09976 Tetratricopeptide repeat-like domain LJF99_RS04965 PF13393 Histidyl-tRNA synthetase LJF99_RS04965 PF03129 Anticodon binding domain LJF99_RS04970 PF04551 GcpE protein LJF99_RS04975 PF13464 Domain of unknown function (DUF4115) LJF99_RS04985 PF04055 Radical SAM superfamily LJF99_RS04990 PF00334 Nucleoside diphosphate kinase LJF99_RS04995 PF00883 Cytosol aminopeptidase family, catalytic domain LJF99_RS04995 PF12404 Peptidase LJF99_RS05000 PF12404 Peptidase LJF99_RS05000 PF00883 Cytosol aminopeptidase family, catalytic domain LJF99_RS05005 PF00111 2Fe-2S iron-sulfur cluster binding domain LJF99_RS05010 PF00012 Hsp70 protein LJF99_RS05015 PF00226 DnaJ domain LJF99_RS05015 PF07743 HSCB C-terminal oligomerisation domain LJF99_RS05020 PF01521 Iron-sulphur cluster biosynthesis LJF99_RS05025 PF01592 NifU-like N terminal domain LJF99_RS05030 PF00266 Aminotransferase class-V LJF99_RS05035 PF02082 Transcriptional regulator LJF99_RS05040 PF00588 SpoU rRNA Methylase family LJF99_RS05050 PF02036 SCP-2 sterol transfer family LJF99_RS05055 PF01136 Peptidase family U32 LJF99_RS05060 PF01136 Peptidase family U32 LJF99_RS05065 PF13181 Tetratricopeptide repeat LJF99_RS05065 PF07719 Tetratricopeptide repeat LJF99_RS05070 PF00581 Rhodanese-like domain LJF99_RS05075 PF02355 Protein export membrane protein LJF99_RS05075 PF07549 SecD/SecF GG Motif LJF99_RS05080 PF02355 Protein export membrane protein LJF99_RS05080 PF13721 SecD export protein N-terminal TM region LJF99_RS05080 PF07549 SecD/SecF GG Motif LJF99_RS05085 PF02699 Preprotein translocase subunit LJF99_RS05090 PF01702 Queuine tRNA-ribosyltransferase LJF99_RS05095 PF02547 Queuosine biosynthesis protein LJF99_RS05100 PF00571 CBS domain LJF99_RS05105 PF00578 AhpC/TSA family LJF99_RS05105 PF10417 C-terminal domain of 1-Cys peroxiredoxin LJF99_RS05110 PF13192 Thioredoxin domain LJF99_RS05110 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJF99_RS05115 PF07690 Major Facilitator Superfamily LJF99_RS05125 PF02347 Glycine cleavage system P-protein LJF99_RS05130 PF01597 Glycine cleavage H-protein LJF99_RS05135 PF08669 Glycine cleavage T-protein C-terminal barrel domain LJF99_RS05135 PF01571 Aminomethyltransferase folate-binding domain LJF99_RS05140 PF01494 FAD binding domain LJF99_RS05145 PF01494 FAD binding domain LJF99_RS05150 PF03695 Uncharacterised protein family (UPF0149) LJF99_RS05155 PF05164 Cell division protein ZapA LJF99_RS05170 PF02634 FdhD/NarQ family LJF99_RS05175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS05175 PF03466 LysR substrate binding domain LJF99_RS05180 PF07690 Major Facilitator Superfamily LJF99_RS05185 PF00005 ABC transporter LJF99_RS05190 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS05190 PF12911 N-terminal TM domain of oligopeptide transport permease C LJF99_RS05195 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS05205 PF00043 Glutathione S-transferase, C-terminal domain LJF99_RS05205 PF02798 Glutathione S-transferase, N-terminal domain LJF99_RS05215 PF00459 Inositol monophosphatase family LJF99_RS05220 PF00672 HAMP domain LJF99_RS05220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS05225 PF02535 ZIP Zinc transporter LJF99_RS05235 PF01048 Phosphorylase superfamily LJF99_RS05245 PF01497 Periplasmic binding protein LJF99_RS05265 PF02561 Flagellar protein FliS LJF99_RS05270 PF07195 Flagellar hook-associated protein 2 C-terminus LJF99_RS05270 PF07196 Flagellin hook IN motif LJF99_RS05270 PF02465 Flagellar hook-associated protein 2 N-terminus LJF99_RS05280 PF00700 Bacterial flagellin C-terminal helical region LJF99_RS05280 PF00669 Bacterial flagellin N-terminal helical region LJF99_RS05285 PF00700 Bacterial flagellin C-terminal helical region LJF99_RS05285 PF00669 Bacterial flagellin N-terminal helical region LJF99_RS05285 PF07196 Flagellin hook IN motif LJF99_RS05290 PF03458 UPF0126 domain LJF99_RS05300 PF02568 Thiamine biosynthesis protein (ThiI) LJF99_RS05300 PF02926 THUMP domain LJF99_RS05470 PF05772 NinB protein LJF99_RS05500 PF00145 C-5 cytosine-specific DNA methylase LJF99_RS05575 PF12684 PDDEXK-like domain of unknown function (DUF3799) LJF99_RS05575 PF06630 Enterobacterial exodeoxyribonuclease VIII LJF99_RS05610 PF04381 Putative exonuclease, RdgC LJF99_RS05660 PF12167 Arm DNA-binding domain LJF99_RS05660 PF00589 Phage integrase family LJF99_RS05670 PF00905 Penicillin binding protein transpeptidase domain LJF99_RS05670 PF00912 Transglycosylase LJF99_RS05670 PF06832 Penicillin-Binding Protein C-terminus Family LJF99_RS05675 PF00207 Alpha-2-macroglobulin family LJF99_RS05675 PF07703 Alpha-2-macroglobulin bait region domain LJF99_RS05675 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LJF99_RS05675 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LJF99_RS05675 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LJF99_RS05675 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LJF99_RS05675 PF17962 Bacterial macroglobulin domain 6 LJF99_RS05675 PF01835 MG2 domain LJF99_RS05675 PF07678 A-macroglobulin TED domain LJF99_RS05685 PF03707 Bacterial signalling protein N terminal repeat LJF99_RS05685 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS05685 PF00563 EAL domain LJF99_RS05690 PF04055 Radical SAM superfamily LJF99_RS05705 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS05710 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS05715 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJF99_RS05720 PF00005 ABC transporter LJF99_RS05725 PF03956 Lysine exporter LysO LJF99_RS05730 PF04336 Acyl carrier protein phosphodiesterase LJF99_RS05740 PF03960 ArsC family LJF99_RS05750 PF07720 Tetratricopeptide repeat LJF99_RS05750 PF01435 Peptidase family M48 LJF99_RS05755 PF01206 Sulfurtransferase TusA LJF99_RS05760 PF01594 AI-2E family transporter LJF99_RS05765 PF00561 alpha/beta hydrolase fold LJF99_RS05770 PF03976 Polyphosphate kinase 2 (PPK2) LJF99_RS05775 PF00005 ABC transporter LJF99_RS05775 PF08402 TOBE domain LJF99_RS05780 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS05785 PF14785 Maltose transport system permease protein MalF P2 domain LJF99_RS05785 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS05790 PF01547 Bacterial extracellular solute-binding protein LJF99_RS05795 PF04245 37-kD nucleoid-associated bacterial protein LJF99_RS05800 PF07208 Protein of unknown function (DUF1414) LJF99_RS05805 PF11893 Domain of unknown function (DUF3413) LJF99_RS05805 PF00884 Sulfatase LJF99_RS05810 PF07715 TonB-dependent Receptor Plug Domain LJF99_RS05810 PF00593 TonB dependent receptor LJF99_RS05815 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LJF99_RS05815 PF00326 Prolyl oligopeptidase family LJF99_RS05835 PF03974 Ecotin LJF99_RS05840 PF04219 Protein of unknown function, DUF LJF99_RS05845 PF03466 LysR substrate binding domain LJF99_RS05845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS05850 PF01817 Chorismate mutase type II LJF99_RS05850 PF02153 Prephenate dehydrogenase LJF99_RS05855 PF00793 DAHP synthetase I family LJF99_RS05860 PF03009 Glycerophosphoryl diester phosphodiesterase family LJF99_RS05865 PF01266 FAD dependent oxidoreductase LJF99_RS05865 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LJF99_RS05875 PF00455 DeoR C terminal sensor domain LJF99_RS05875 PF08220 DeoR-like helix-turn-helix domain LJF99_RS05880 PF07690 Major Facilitator Superfamily LJF99_RS05885 PF00230 Major intrinsic protein LJF99_RS05890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LJF99_RS05890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LJF99_RS05895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS05895 PF03466 LysR substrate binding domain LJF99_RS05925 PF03992 Antibiotic biosynthesis monooxygenase LJF99_RS05930 PF00248 Aldo/keto reductase family LJF99_RS05935 PF07690 Major Facilitator Superfamily LJF99_RS05945 PF02322 Cytochrome bd terminal oxidase subunit II LJF99_RS05950 PF01654 Cytochrome bd terminal oxidase subunit I LJF99_RS05955 PF00155 Aminotransferase class I and II LJF99_RS05955 PF00392 Bacterial regulatory proteins, gntR family LJF99_RS05960 PF04391 Protein of unknown function (DUF533) LJF99_RS05970 PF10689 Protein of unknown function (DUF2496) LJF99_RS05980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS05980 PF03466 LysR substrate binding domain LJF99_RS05990 PF07690 Major Facilitator Superfamily LJF99_RS05995 PF00849 RNA pseudouridylate synthase LJF99_RS05995 PF01479 S4 domain LJF99_RS06000 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LJF99_RS06000 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LJF99_RS06010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LJF99_RS06025 PF00300 Histidine phosphatase superfamily (branch 1) LJF99_RS06040 PF17810 Arginine decarboxylase helical bundle domain LJF99_RS06040 PF17944 Arginine decarboxylase C-terminal helical extension LJF99_RS06040 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LJF99_RS06045 PF01546 Peptidase family M20/M25/M40 LJF99_RS06045 PF07687 Peptidase dimerisation domain LJF99_RS06070 PF04264 YceI-like domain LJF99_RS06075 PF03466 LysR substrate binding domain LJF99_RS06075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS06085 PF01268 Formate--tetrahydrofolate ligase LJF99_RS06090 PF00672 HAMP domain LJF99_RS06090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS06090 PF17200 Single Cache domain 2 LJF99_RS06095 PF01227 GTP cyclohydrolase I LJF99_RS06100 PF03453 MoeA N-terminal region (domain I and II) LJF99_RS06100 PF00994 Probable molybdopterin binding domain LJF99_RS06100 PF03454 MoeA C-terminal region (domain IV) LJF99_RS06105 PF00899 ThiF family LJF99_RS06110 PF06291 Bor protein LJF99_RS06115 PF06291 Bor protein LJF99_RS06125 PF06406 StbA protein LJF99_RS06130 PF00561 alpha/beta hydrolase fold LJF99_RS06135 PF00005 ABC transporter LJF99_RS06135 PF03459 TOBE domain LJF99_RS06140 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS06150 PF02391 MoaE protein LJF99_RS06155 PF02597 ThiS family LJF99_RS06160 PF01967 MoaC family LJF99_RS06165 PF00994 Probable molybdopterin binding domain LJF99_RS06170 PF03264 NapC/NirT cytochrome c family, N-terminal region LJF99_RS06175 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LJF99_RS06180 PF12801 4Fe-4S binding domain LJF99_RS06180 PF13237 4Fe-4S dicluster domain LJF99_RS06185 PF12800 4Fe-4S binding domain LJF99_RS06185 PF12838 4Fe-4S dicluster domain LJF99_RS06190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LJF99_RS06190 PF00384 Molybdopterin oxidoreductase LJF99_RS06190 PF01568 Molydopterin dinucleotide binding domain LJF99_RS06190 PF10518 TAT (twin-arginine translocation) pathway signal sequence LJF99_RS06200 PF12838 4Fe-4S dicluster domain LJF99_RS06200 PF13187 4Fe-4S dicluster domain LJF99_RS06205 PF06463 Molybdenum Cofactor Synthesis C LJF99_RS06205 PF04055 Radical SAM superfamily LJF99_RS06210 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LJF99_RS06210 PF07730 Histidine kinase LJF99_RS06210 PF00672 HAMP domain LJF99_RS06210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS06215 PF00196 Bacterial regulatory proteins, luxR family LJF99_RS06215 PF00072 Response regulator receiver domain LJF99_RS06225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS06225 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS06225 PF09456 RcsC Alpha-Beta-Loop (ABL) LJF99_RS06225 PF00072 Response regulator receiver domain LJF99_RS06235 PF01933 Uncharacterised protein family UPF0052 LJF99_RS06245 PF13230 Glutamine amidotransferases class-II LJF99_RS06250 PF13580 SIS domain LJF99_RS06255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LJF99_RS06255 PF09317 Domain of unknown function (DUF1974) LJF99_RS06255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LJF99_RS06255 PF02770 Acyl-CoA dehydrogenase, middle domain LJF99_RS06260 PF11849 Domain of unknown function (DUF3369) LJF99_RS06270 PF00929 Exonuclease LJF99_RS06275 PF00075 RNase H LJF99_RS06280 PF08241 Methyltransferase domain LJF99_RS06285 PF16123 Hydroxyacylglutathione hydrolase C-terminus LJF99_RS06285 PF00753 Metallo-beta-lactamase superfamily LJF99_RS06290 PF01476 LysM domain LJF99_RS06290 PF01464 Transglycosylase SLT domain LJF99_RS06295 PF03372 Endonuclease/Exonuclease/phosphatase family LJF99_RS06300 PF03061 Thioesterase superfamily LJF99_RS06310 PF00356 Bacterial regulatory proteins, lacI family LJF99_RS06315 PF01464 Transglycosylase SLT domain LJF99_RS06315 PF14718 Soluble lytic murein transglycosylase L domain LJF99_RS06320 PF00563 EAL domain LJF99_RS06320 PF03707 Bacterial signalling protein N terminal repeat LJF99_RS06320 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS06325 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LJF99_RS06340 PF04357 TamB, inner membrane protein subunit of TAM complex LJF99_RS06345 PF01103 Surface antigen LJF99_RS06345 PF07244 Surface antigen variable number repeat LJF99_RS06345 PF17243 POTRA domain TamA domain 1 LJF99_RS06365 PF01625 Peptide methionine sulfoxide reductase LJF99_RS06375 PF02627 Carboxymuconolactone decarboxylase family LJF99_RS06380 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJF99_RS06380 PF00403 Heavy-metal-associated domain LJF99_RS06380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LJF99_RS06385 PF13416 Bacterial extracellular solute-binding protein LJF99_RS06390 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS06395 PF00005 ABC transporter LJF99_RS06400 PF01066 CDP-alcohol phosphatidyltransferase LJF99_RS06405 PF13406 Transglycosylase SLT domain LJF99_RS06410 PF01047 MarR family LJF99_RS06420 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LJF99_RS06420 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LJF99_RS06420 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LJF99_RS06420 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LJF99_RS06425 PF03925 SeqA protein C-terminal domain LJF99_RS06425 PF17206 SeqA protein N-terminal domain LJF99_RS06430 PF12697 Alpha/beta hydrolase family LJF99_RS06440 PF01402 Ribbon-helix-helix protein, copG family LJF99_RS06445 PF00258 Flavodoxin LJF99_RS06455 PF01475 Ferric uptake regulator family LJF99_RS06460 PF00749 tRNA synthetases class I (E and Q), catalytic domain LJF99_RS06460 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LJF99_RS06465 PF03173 Putative carbohydrate binding domain LJF99_RS06465 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain LJF99_RS06465 PF00728 Glycosyl hydrolase family 20, catalytic domain LJF99_RS06465 PF02838 Glycosyl hydrolase family 20, domain 2 LJF99_RS06470 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LJF99_RS06470 PF00367 phosphotransferase system, EIIB LJF99_RS06470 PF02378 Phosphotransferase system, EIIC LJF99_RS06475 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LJF99_RS06480 PF01979 Amidohydrolase family LJF99_RS06485 PF00480 ROK family LJF99_RS06485 PF01047 MarR family LJF99_RS06505 PF01648 4'-phosphopantetheinyl transferase superfamily LJF99_RS06505 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LJF99_RS06515 PF00534 Glycosyl transferases group 1 LJF99_RS06515 PF13439 Glycosyltransferase Family 4 LJF99_RS06525 PF13193 AMP-binding enzyme C-terminal domain LJF99_RS06525 PF00550 Phosphopantetheine attachment site LJF99_RS06525 PF00668 Condensation domain LJF99_RS06525 PF00501 AMP-binding enzyme LJF99_RS06530 PF02801 Beta-ketoacyl synthase, C-terminal domain LJF99_RS06530 PF00698 Acyl transferase domain LJF99_RS06530 PF08240 Alcohol dehydrogenase GroES-like domain LJF99_RS06530 PF16197 Ketoacyl-synthetase C-terminal extension LJF99_RS06530 PF00109 Beta-ketoacyl synthase, N-terminal domain LJF99_RS06530 PF08659 KR domain LJF99_RS06530 PF00550 Phosphopantetheine attachment site LJF99_RS06530 PF14765 Polyketide synthase dehydratase LJF99_RS06540 PF02801 Beta-ketoacyl synthase, C-terminal domain LJF99_RS06540 PF00550 Phosphopantetheine attachment site LJF99_RS06540 PF00109 Beta-ketoacyl synthase, N-terminal domain LJF99_RS06540 PF16197 Ketoacyl-synthetase C-terminal extension LJF99_RS06540 PF00698 Acyl transferase domain LJF99_RS06540 PF00668 Condensation domain LJF99_RS06555 PF01695 IstB-like ATP binding protein LJF99_RS06560 PF00665 Integrase core domain LJF99_RS06570 PF00550 Phosphopantetheine attachment site LJF99_RS06570 PF00975 Thioesterase domain LJF99_RS06570 PF00668 Condensation domain LJF99_RS06570 PF13193 AMP-binding enzyme C-terminal domain LJF99_RS06570 PF00501 AMP-binding enzyme LJF99_RS06580 PF00728 Glycosyl hydrolase family 20, catalytic domain LJF99_RS06580 PF03173 Putative carbohydrate binding domain LJF99_RS06580 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain LJF99_RS06580 PF02838 Glycosyl hydrolase family 20, domain 2 LJF99_RS06585 PF08019 Phosphoethanolamine transferase EptA/EptB LJF99_RS06585 PF00884 Sulfatase LJF99_RS06590 PF01709 Transcriptional regulator LJF99_RS06595 PF01336 OB-fold nucleic acid binding domain LJF99_RS06595 PF02938 GAD domain LJF99_RS06595 PF00152 tRNA synthetases class II (D, K and N) LJF99_RS06605 PF13649 Methyltransferase domain LJF99_RS06610 PF08003 Protein of unknown function (DUF1698) LJF99_RS06630 PF10417 C-terminal domain of 1-Cys peroxiredoxin LJF99_RS06630 PF00578 AhpC/TSA family LJF99_RS06635 PF13358 DDE superfamily endonuclease LJF99_RS06635 PF13592 Winged helix-turn helix LJF99_RS06640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS06640 PF03466 LysR substrate binding domain LJF99_RS06645 PF12563 Hemolytic toxin N terminal LJF99_RS06645 PF07968 Leukocidin/Hemolysin toxin family LJF99_RS06650 PF00877 NlpC/P60 family LJF99_RS06660 PF00171 Aldehyde dehydrogenase family LJF99_RS06665 PF17932 Tetracyclin repressor-like, C-terminal domain LJF99_RS06665 PF00440 Bacterial regulatory proteins, tetR family LJF99_RS06675 PF00465 Iron-containing alcohol dehydrogenase LJF99_RS06685 PF00291 Pyridoxal-phosphate dependent enzyme LJF99_RS06700 PF01740 STAS domain LJF99_RS06700 PF00916 Sulfate permease family LJF99_RS06705 PF01554 MatE LJF99_RS06715 PF04325 Protein of unknown function (DUF465) LJF99_RS06730 PF03476 MOSC N-terminal beta barrel domain LJF99_RS06730 PF00111 2Fe-2S iron-sulfur cluster binding domain LJF99_RS06730 PF03473 MOSC domain LJF99_RS06730 PF03473 MOSC domain LJF99_RS06730 PF00111 2Fe-2S iron-sulfur cluster binding domain LJF99_RS06730 PF03476 MOSC N-terminal beta barrel domain LJF99_RS06735 PF13426 PAS domain LJF99_RS06735 PF08447 PAS fold LJF99_RS06735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS06740 PF01435 Peptidase family M48 LJF99_RS06750 PF12697 Alpha/beta hydrolase family LJF99_RS06750 PF08241 Methyltransferase domain LJF99_RS06755 PF00155 Aminotransferase class I and II LJF99_RS06760 PF06968 Biotin and Thiamin Synthesis associated domain LJF99_RS06760 PF04055 Radical SAM superfamily LJF99_RS06765 PF00202 Aminotransferase class-III LJF99_RS06780 PF00152 tRNA synthetases class II (D, K and N) LJF99_RS06780 PF01336 OB-fold nucleic acid binding domain LJF99_RS06785 PF03605 Anaerobic c4-dicarboxylate membrane transporter LJF99_RS06800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS06800 PF03466 LysR substrate binding domain LJF99_RS06805 PF03960 ArsC family LJF99_RS06810 PF01546 Peptidase family M20/M25/M40 LJF99_RS06810 PF07687 Peptidase dimerisation domain LJF99_RS06815 PF02557 D-alanyl-D-alanine carboxypeptidase LJF99_RS06825 PF03471 Transporter associated domain LJF99_RS06825 PF00999 Sodium/hydrogen exchanger family LJF99_RS06825 PF02080 TrkA-C domain LJF99_RS06835 PF03471 Transporter associated domain LJF99_RS06835 PF02080 TrkA-C domain LJF99_RS06835 PF00999 Sodium/hydrogen exchanger family LJF99_RS06845 PF01810 LysE type translocator LJF99_RS06850 PF12729 Four helix bundle sensory module for signal transduction LJF99_RS06850 PF00672 HAMP domain LJF99_RS06850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS06855 PF07509 Protein of unknown function (DUF1523) LJF99_RS06870 PF01156 Inosine-uridine preferring nucleoside hydrolase LJF99_RS06875 PF00849 RNA pseudouridylate synthase LJF99_RS06880 PF01048 Phosphorylase superfamily LJF99_RS06885 PF00465 Iron-containing alcohol dehydrogenase LJF99_RS06920 PF00437 Type II/IV secretion system protein LJF99_RS06925 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LJF99_RS06935 PF04972 BON domain LJF99_RS06935 PF00263 Bacterial type II and III secretion system protein LJF99_RS06935 PF13629 Pilus formation protein N terminal region LJF99_RS06970 PF04355 SmpA / OmlA family LJF99_RS06975 PF13460 NAD(P)H-binding LJF99_RS06980 PF03658 RnfH family Ubiquitin LJF99_RS06985 PF03364 Polyketide cyclase / dehydrase and lipid transport LJF99_RS06990 PF01668 SmpB protein LJF99_RS07065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS07065 PF03466 LysR substrate binding domain LJF99_RS07070 PF02447 GntP family permease LJF99_RS07075 PF00291 Pyridoxal-phosphate dependent enzyme LJF99_RS07085 PF00180 Isocitrate/isopropylmalate dehydrogenase LJF99_RS07090 PF12833 Helix-turn-helix domain LJF99_RS07095 PF01238 Phosphomannose isomerase type I LJF99_RS07120 PF00155 Aminotransferase class I and II LJF99_RS07125 PF00367 phosphotransferase system, EIIB LJF99_RS07125 PF02378 Phosphotransferase system, EIIC LJF99_RS07130 PF00356 Bacterial regulatory proteins, lacI family LJF99_RS07130 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LJF99_RS07145 PF00561 alpha/beta hydrolase fold LJF99_RS07150 PF07690 Major Facilitator Superfamily LJF99_RS07155 PF01040 UbiA prenyltransferase family LJF99_RS07160 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LJF99_RS07165 PF00510 Cytochrome c oxidase subunit III LJF99_RS07170 PF00115 Cytochrome C and Quinol oxidase polypeptide I LJF99_RS07175 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LJF99_RS07175 PF06481 COX Aromatic Rich Motif LJF99_RS07185 PF00034 Cytochrome c LJF99_RS07185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LJF99_RS07195 PF01156 Inosine-uridine preferring nucleoside hydrolase LJF99_RS07210 PF00127 Copper binding proteins, plastocyanin/azurin family LJF99_RS07215 PF02424 ApbE family LJF99_RS07230 PF03372 Endonuclease/Exonuclease/phosphatase family LJF99_RS07235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LJF99_RS07240 PF00873 AcrB/AcrD/AcrF family LJF99_RS07255 PF00529 HlyD membrane-fusion protein of T1SS LJF99_RS07255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LJF99_RS07260 PF00873 AcrB/AcrD/AcrF family LJF99_RS07270 PF03099 Biotin/lipoate A/B protein ligase family LJF99_RS07270 PF10437 Bacterial lipoate protein ligase C-terminus LJF99_RS07275 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS07275 PF00563 EAL domain LJF99_RS07275 PF03707 Bacterial signalling protein N terminal repeat LJF99_RS07280 PF00873 AcrB/AcrD/AcrF family LJF99_RS07295 PF04143 Sulphur transport LJF99_RS07315 PF02308 MgtC family LJF99_RS07320 PF00356 Bacterial regulatory proteins, lacI family LJF99_RS07320 PF13407 Periplasmic binding protein domain LJF99_RS07330 PF00367 phosphotransferase system, EIIB LJF99_RS07330 PF02378 Phosphotransferase system, EIIC LJF99_RS07335 PF00294 pfkB family carbohydrate kinase LJF99_RS07340 PF02264 LamB porin LJF99_RS07340 PF11471 Maltoporin periplasmic N-terminal extension LJF99_RS07345 PF00684 DnaJ central domain LJF99_RS07345 PF01556 DnaJ C terminal domain LJF99_RS07345 PF00226 DnaJ domain LJF99_RS07350 PF00012 Hsp70 protein LJF99_RS07355 PF01025 GrpE LJF99_RS07360 PF01513 ATP-NAD kinase LJF99_RS07365 PF02463 RecF/RecN/SMC N terminal domain LJF99_RS07370 PF01368 DHH family LJF99_RS07370 PF02833 DHHA2 domain LJF99_RS07380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LJF99_RS07385 PF00005 ABC transporter LJF99_RS07385 PF02687 FtsX-like permease family LJF99_RS07385 PF12704 MacB-like periplasmic core domain LJF99_RS07390 PF02321 Outer membrane efflux protein LJF99_RS07395 PF04954 Siderophore-interacting protein LJF99_RS07395 PF08021 Siderophore-interacting FAD-binding domain LJF99_RS07400 PF00793 DAHP synthetase I family LJF99_RS07405 PF00872 Transposase, Mutator family LJF99_RS07410 PF00816 H-NS histone family LJF99_RS07435 PF07883 Cupin domain LJF99_RS07435 PF12833 Helix-turn-helix domain LJF99_RS07445 PF01266 FAD dependent oxidoreductase LJF99_RS07450 PF01381 Helix-turn-helix LJF99_RS07450 PF07883 Cupin domain LJF99_RS07455 PF00171 Aldehyde dehydrogenase family LJF99_RS07460 PF00202 Aminotransferase class-III LJF99_RS07465 PF00324 Amino acid permease LJF99_RS07470 PF00324 Amino acid permease LJF99_RS07475 PF02690 Na+/Pi-cotransporter LJF99_RS07480 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LJF99_RS07480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LJF99_RS07485 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LJF99_RS07500 PF01048 Phosphorylase superfamily LJF99_RS07520 PF01797 Transposase IS200 like LJF99_RS07530 PF13592 Winged helix-turn helix LJF99_RS07530 PF13358 DDE superfamily endonuclease LJF99_RS07545 PF13592 Winged helix-turn helix LJF99_RS07545 PF13358 DDE superfamily endonuclease LJF99_RS07550 PF14821 Threonine synthase N terminus LJF99_RS07550 PF00291 Pyridoxal-phosphate dependent enzyme LJF99_RS07555 PF08544 GHMP kinases C terminal LJF99_RS07555 PF00288 GHMP kinases N terminal domain LJF99_RS07560 PF00696 Amino acid kinase family LJF99_RS07560 PF01842 ACT domain LJF99_RS07560 PF13840 ACT domain LJF99_RS07560 PF00742 Homoserine dehydrogenase LJF99_RS07560 PF03447 Homoserine dehydrogenase, NAD binding domain LJF99_RS07565 PF00588 SpoU rRNA Methylase family LJF99_RS07570 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LJF99_RS07585 PF03737 Aldolase/RraA LJF99_RS07595 PF00072 Response regulator receiver domain LJF99_RS07595 PF00486 Transcriptional regulatory protein, C terminal LJF99_RS07610 PF00664 ABC transporter transmembrane region LJF99_RS07610 PF00005 ABC transporter LJF99_RS07615 PF00005 ABC transporter LJF99_RS07615 PF00664 ABC transporter transmembrane region LJF99_RS07635 PF01980 tRNA-methyltransferase O LJF99_RS07635 PF18389 TrmO C-terminal domain LJF99_RS07640 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LJF99_RS07640 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LJF99_RS07655 PF00291 Pyridoxal-phosphate dependent enzyme LJF99_RS07660 PF00381 PTS HPr component phosphorylation site LJF99_RS07665 PF05524 PEP-utilising enzyme, N-terminal LJF99_RS07665 PF00391 PEP-utilising enzyme, mobile domain LJF99_RS07665 PF02896 PEP-utilising enzyme, TIM barrel domain LJF99_RS07670 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LJF99_RS07675 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS07685 PF01292 Prokaryotic cytochrome b561 LJF99_RS07695 PF13476 AAA domain LJF99_RS07700 PF00149 Calcineurin-like phosphoesterase LJF99_RS07700 PF12320 Type 5 capsule protein repressor C-terminal domain LJF99_RS07710 PF04381 Putative exonuclease, RdgC LJF99_RS07725 PF04389 Peptidase family M28 LJF99_RS07725 PF04151 Bacterial pre-peptidase C-terminal domain LJF99_RS07735 PF00224 Pyruvate kinase, barrel domain LJF99_RS07735 PF02887 Pyruvate kinase, alpha/beta domain LJF99_RS07740 PF12794 Mechanosensitive ion channel inner membrane domain 1 LJF99_RS07740 PF12795 Mechanosensitive ion channel porin domain LJF99_RS07740 PF00924 Mechanosensitive ion channel LJF99_RS07765 PF13358 DDE superfamily endonuclease LJF99_RS07765 PF13592 Winged helix-turn helix LJF99_RS07775 PF02634 FdhD/NarQ family LJF99_RS07785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS07785 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS07785 PF00989 PAS fold LJF99_RS07795 PF12849 PBP superfamily domain LJF99_RS07800 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS07805 PF00005 ABC transporter LJF99_RS07810 PF12804 MobA-like NTP transferase domain LJF99_RS07815 PF03454 MoeA C-terminal region (domain IV) LJF99_RS07815 PF03453 MoeA N-terminal region (domain I and II) LJF99_RS07815 PF00994 Probable molybdopterin binding domain LJF99_RS07820 PF04632 Fusaric acid resistance protein family LJF99_RS07830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS07830 PF08447 PAS fold LJF99_RS07830 PF13426 PAS domain LJF99_RS07840 PF10725 Protein of unknown function (DUF2517) LJF99_RS07860 PF09308 LuxQ, periplasmic LJF99_RS07860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS07860 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS07860 PF00072 Response regulator receiver domain LJF99_RS07865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LJF99_RS07870 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS07875 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS07875 PF12911 N-terminal TM domain of oligopeptide transport permease C LJF99_RS07880 PF00005 ABC transporter LJF99_RS07880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LJF99_RS07885 PF00005 ABC transporter LJF99_RS07885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LJF99_RS07895 PF01869 BadF/BadG/BcrA/BcrD ATPase family LJF99_RS07900 PF00728 Glycosyl hydrolase family 20, catalytic domain LJF99_RS07900 PF02838 Glycosyl hydrolase family 20, domain 2 LJF99_RS07905 PF08447 PAS fold LJF99_RS07905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS07920 PF01751 Toprim domain LJF99_RS07920 PF01131 DNA topoisomerase LJF99_RS07920 PF01396 Topoisomerase DNA binding C4 zinc finger LJF99_RS07920 PF08272 Topoisomerase I zinc-ribbon-like LJF99_RS07925 PF04996 Succinylarginine dihydrolase LJF99_RS07930 PF01343 Peptidase family S49 LJF99_RS07930 PF08496 Peptidase family S49 N-terminal LJF99_RS07935 PF00106 short chain dehydrogenase LJF99_RS07940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS07940 PF03466 LysR substrate binding domain LJF99_RS07945 PF07690 Major Facilitator Superfamily LJF99_RS07950 PF00155 Aminotransferase class I and II LJF99_RS07960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS07960 PF03466 LysR substrate binding domain LJF99_RS07965 PF00709 Adenylosuccinate synthetase LJF99_RS07970 PF01161 Phosphatidylethanolamine-binding protein LJF99_RS07980 PF00128 Alpha amylase, catalytic domain LJF99_RS07990 PF00196 Bacterial regulatory proteins, luxR family LJF99_RS07990 PF00072 Response regulator receiver domain LJF99_RS08025 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS08030 PF09179 TilS substrate binding domain LJF99_RS08030 PF11734 TilS substrate C-terminal domain LJF99_RS08030 PF01171 PP-loop family LJF99_RS08035 PF05649 Peptidase family M13 LJF99_RS08035 PF01431 Peptidase family M13 LJF99_RS08045 PF16326 ABC transporter C-terminal domain LJF99_RS08045 PF00005 ABC transporter LJF99_RS08045 PF12848 ABC transporter LJF99_RS08050 PF13302 Acetyltransferase (GNAT) domain LJF99_RS08055 PF13520 Amino acid permease LJF99_RS08065 PF03466 LysR substrate binding domain LJF99_RS08065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS08075 PF08543 Phosphomethylpyrimidine kinase LJF99_RS08080 PF01276 Orn/Lys/Arg decarboxylase, major domain LJF99_RS08080 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LJF99_RS08080 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LJF99_RS08085 PF13520 Amino acid permease LJF99_RS08090 PF00486 Transcriptional regulatory protein, C terminal LJF99_RS08090 PF18500 CadC C-terminal domain 1 LJF99_RS08095 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LJF99_RS08100 PF01336 OB-fold nucleic acid binding domain LJF99_RS08100 PF02811 PHP domain LJF99_RS08100 PF14579 Helix-hairpin-helix motif LJF99_RS08100 PF07733 Bacterial DNA polymerase III alpha NTPase domain LJF99_RS08100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LJF99_RS08105 PF01351 Ribonuclease HII LJF99_RS08110 PF02684 Lipid-A-disaccharide synthetase LJF99_RS08115 PF00132 Bacterial transferase hexapeptide (six repeats) LJF99_RS08115 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LJF99_RS08120 PF07977 FabA-like domain LJF99_RS08125 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LJF99_RS08125 PF00132 Bacterial transferase hexapeptide (six repeats) LJF99_RS08130 PF03938 Outer membrane protein (OmpH-like) LJF99_RS08135 PF01103 Surface antigen LJF99_RS08135 PF07244 Surface antigen variable number repeat LJF99_RS08140 PF17820 PDZ domain LJF99_RS08140 PF02163 Peptidase family M50 LJF99_RS08145 PF13288 DXP reductoisomerase C-terminal domain LJF99_RS08145 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LJF99_RS08145 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LJF99_RS08155 PF01255 Putative undecaprenyl diphosphate synthase LJF99_RS08160 PF01765 Ribosome recycling factor LJF99_RS08165 PF00696 Amino acid kinase family LJF99_RS08170 PF00889 Elongation factor TS LJF99_RS08175 PF00318 Ribosomal protein S2 LJF99_RS08180 PF00557 Metallopeptidase family M24 LJF99_RS08190 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LJF99_RS08190 PF14602 Hexapeptide repeat of succinyl-transferase LJF99_RS08190 PF00132 Bacterial transferase hexapeptide (six repeats) LJF99_RS08195 PF11944 Protein of unknown function (DUF3461) LJF99_RS08200 PF00367 phosphotransferase system, EIIB LJF99_RS08200 PF02378 Phosphotransferase system, EIIC LJF99_RS08205 PF07148 Maltose operon periplasmic protein precursor (MalM) LJF99_RS08220 PF02264 LamB porin LJF99_RS08225 PF00258 Flavodoxin LJF99_RS08230 PF00849 RNA pseudouridylate synthase LJF99_RS08235 PF04287 tRNA pseudouridine synthase C LJF99_RS08260 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) LJF99_RS08265 PF07348 Syd protein (SUKH-2) LJF99_RS08270 PF14489 QueF-like protein LJF99_RS08270 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LJF99_RS08280 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS08285 PF11892 Domain of unknown function (DUF3412) LJF99_RS08285 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LJF99_RS08285 PF03641 Possible lysine decarboxylase LJF99_RS08290 PF01367 5'-3' exonuclease, C-terminal SAM fold LJF99_RS08290 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LJF99_RS08295 PF00180 Isocitrate/isopropylmalate dehydrogenase LJF99_RS08295 PF18324 Hypothetical protein TT1725 LJF99_RS08305 PF01728 FtsJ-like methyltransferase LJF99_RS08305 PF18125 RlmM ferredoxin-like domain LJF99_RS08310 PF04241 Protein of unknown function (DUF423) LJF99_RS08320 PF03466 LysR substrate binding domain LJF99_RS08320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS08325 PF00672 HAMP domain LJF99_RS08325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS08330 PF00817 impB/mucB/samB family LJF99_RS08330 PF11799 impB/mucB/samB family C-terminal domain LJF99_RS08330 PF11798 IMS family HHH motif LJF99_RS08345 PF02424 ApbE family LJF99_RS08350 PF00970 Oxidoreductase FAD-binding domain LJF99_RS08350 PF00111 2Fe-2S iron-sulfur cluster binding domain LJF99_RS08350 PF00175 Oxidoreductase NAD-binding domain LJF99_RS08355 PF02508 Rnf-Nqr subunit, membrane protein LJF99_RS08360 PF02508 Rnf-Nqr subunit, membrane protein LJF99_RS08365 PF04205 FMN-binding domain LJF99_RS08370 PF03116 NQR2, RnfD, RnfE family LJF99_RS08375 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LJF99_RS08375 PF11973 NQRA C-terminal domain LJF99_RS08385 PF01722 BolA-like protein LJF99_RS08390 PF05175 Methyltransferase small domain LJF99_RS08400 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LJF99_RS08410 PF07690 Major Facilitator Superfamily LJF99_RS08415 PF03502 Nucleoside-specific channel-forming protein, Tsx LJF99_RS08420 PF04461 Protein of unknown function (DUF520) LJF99_RS08425 PF02558 Ketopantoate reductase PanE/ApbA LJF99_RS08425 PF08546 Ketopantoate reductase PanE/ApbA C terminal LJF99_RS08430 PF01965 DJ-1/PfpI family LJF99_RS08440 PF03306 Alpha-acetolactate decarboxylase LJF99_RS08445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS08445 PF03466 LysR substrate binding domain LJF99_RS08450 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LJF99_RS08450 PF06165 Glycosyltransferase family 36 LJF99_RS08450 PF10091 Putative glucoamylase LJF99_RS08460 PF13462 Thioredoxin LJF99_RS08460 PF06965 Na+/H+ antiporter 1 LJF99_RS08465 PF16363 GDP-mannose 4,6 dehydratase LJF99_RS08470 PF00111 2Fe-2S iron-sulfur cluster binding domain LJF99_RS08470 PF00175 Oxidoreductase NAD-binding domain LJF99_RS08470 PF00970 Oxidoreductase FAD-binding domain LJF99_RS08475 PF03063 Prismane/CO dehydrogenase family LJF99_RS08480 PF00210 Ferritin-like domain LJF99_RS08520 PF00106 short chain dehydrogenase LJF99_RS08530 PF03441 FAD binding domain of DNA photolyase LJF99_RS08530 PF00875 DNA photolyase LJF99_RS08535 PF13411 MerR HTH family regulatory protein LJF99_RS08540 PF08349 Protein of unknown function (DUF1722) LJF99_RS08570 PF01817 Chorismate mutase type II LJF99_RS08570 PF00800 Prephenate dehydratase LJF99_RS08595 PF07995 Glucose / Sorbosone dehydrogenase LJF99_RS08605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS08615 PF00106 short chain dehydrogenase LJF99_RS08640 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LJF99_RS08650 PF00730 HhH-GPD superfamily base excision DNA repair protein LJF99_RS08650 PF12833 Helix-turn-helix domain LJF99_RS08650 PF02805 Metal binding domain of Ada LJF99_RS08650 PF06029 AlkA N-terminal domain LJF99_RS08655 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LJF99_RS08655 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LJF99_RS08665 PF01209 ubiE/COQ5 methyltransferase family LJF99_RS08670 PF06906 Protein of unknown function (DUF1272) LJF99_RS08685 PF01810 LysE type translocator LJF99_RS08690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS08690 PF03466 LysR substrate binding domain LJF99_RS08695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LJF99_RS08695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LJF99_RS08705 PF00072 Response regulator receiver domain LJF99_RS08715 PF02895 Signal transducing histidine kinase, homodimeric domain LJF99_RS08715 PF01584 CheW-like domain LJF99_RS08715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS08715 PF01627 Hpt domain LJF99_RS08720 PF12729 Four helix bundle sensory module for signal transduction LJF99_RS08720 PF00672 HAMP domain LJF99_RS08720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS08725 PF01584 CheW-like domain LJF99_RS08730 PF00672 HAMP domain LJF99_RS08730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS08730 PF02203 Tar ligand binding domain homologue LJF99_RS08735 PF01739 CheR methyltransferase, SAM binding domain LJF99_RS08735 PF03705 CheR methyltransferase, all-alpha domain LJF99_RS08740 PF03975 CheD chemotactic sensory transduction LJF99_RS08745 PF01339 CheB methylesterase LJF99_RS08745 PF00072 Response regulator receiver domain LJF99_RS08750 PF00266 Aminotransferase class-V LJF99_RS08775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS08775 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS08775 PF01627 Hpt domain LJF99_RS08775 PF00072 Response regulator receiver domain LJF99_RS08775 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LJF99_RS08775 PF00672 HAMP domain LJF99_RS08780 PF00196 Bacterial regulatory proteins, luxR family LJF99_RS08780 PF00072 Response regulator receiver domain LJF99_RS08785 PF00072 Response regulator receiver domain LJF99_RS08785 PF00196 Bacterial regulatory proteins, luxR family LJF99_RS08795 PF16967 E-set like domain LJF99_RS08795 PF15976 CS1-pili formation C-terminal LJF99_RS08815 PF01590 GAF domain LJF99_RS08815 PF00989 PAS fold LJF99_RS08815 PF00563 EAL domain LJF99_RS08815 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS08820 PF01136 Peptidase family U32 LJF99_RS08820 PF16325 Peptidase family U32 C-terminal domain LJF99_RS08825 PF12838 4Fe-4S dicluster domain LJF99_RS08830 PF00842 Alanine racemase, C-terminal domain LJF99_RS08830 PF01168 Alanine racemase, N-terminal domain LJF99_RS08835 PF00772 DnaB-like helicase N terminal domain LJF99_RS08835 PF03796 DnaB-like helicase C terminal domain LJF99_RS08850 PF12792 CSS motif domain associated with EAL LJF99_RS08850 PF00563 EAL domain LJF99_RS08855 PF00149 Calcineurin-like phosphoesterase LJF99_RS08855 PF02872 5'-nucleotidase, C-terminal domain LJF99_RS08875 PF00158 Sigma-54 interaction domain LJF99_RS08875 PF00072 Response regulator receiver domain LJF99_RS08875 PF02954 Bacterial regulatory protein, Fis family LJF99_RS08880 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LJF99_RS08880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LJF99_RS08890 PF04102 SlyX LJF99_RS08895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LJF99_RS08900 PF09526 Probable metal-binding protein (DUF2387) LJF99_RS08910 PF00072 Response regulator receiver domain LJF99_RS08910 PF01584 CheW-like domain LJF99_RS08915 PF00561 alpha/beta hydrolase fold LJF99_RS08920 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS08920 PF00563 EAL domain LJF99_RS08920 PF00360 Phytochrome region LJF99_RS08920 PF01590 GAF domain LJF99_RS08925 PF06794 Uncharacterised protein family (UPF0270) LJF99_RS08930 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LJF99_RS08930 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LJF99_RS08930 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LJF99_RS08935 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LJF99_RS08940 PF00535 Glycosyl transferase family 2 LJF99_RS08950 PF01522 Polysaccharide deacetylase LJF99_RS08955 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LJF99_RS08960 PF00892 EamA-like transporter family LJF99_RS08970 PF00485 Phosphoribulokinase / Uridine kinase family LJF99_RS08985 PF02566 OsmC-like protein LJF99_RS08990 PF00027 Cyclic nucleotide-binding domain LJF99_RS08990 PF13545 Crp-like helix-turn-helix domain LJF99_RS08995 PF08241 Methyltransferase domain LJF99_RS09000 PF18416 N-acetylglucosamine binding protein domain 2 LJF99_RS09000 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LJF99_RS09005 PF17945 Beta/Gamma crystallin LJF99_RS09005 PF12561 ToxR activated gene A lipoprotein domain LJF99_RS09025 PF13443 Cro/C1-type HTH DNA-binding domain LJF99_RS09035 PF12832 MFS_1 like family LJF99_RS09040 PF00593 TonB dependent receptor LJF99_RS09040 PF07715 TonB-dependent Receptor Plug Domain LJF99_RS09060 PF01243 Pyridoxamine 5'-phosphate oxidase LJF99_RS09065 PF06228 Haem utilisation ChuX/HutX LJF99_RS09075 PF01032 FecCD transport family LJF99_RS09080 PF00005 ABC transporter LJF99_RS09090 PF01370 NAD dependent epimerase/dehydratase family LJF99_RS09105 PF00005 ABC transporter LJF99_RS09105 PF12848 ABC transporter LJF99_RS09120 PF00226 DnaJ domain LJF99_RS09120 PF05099 Tellurite resistance protein TerB LJF99_RS09125 PF00483 Nucleotidyl transferase LJF99_RS09130 PF01636 Phosphotransferase enzyme family LJF99_RS09135 PF04453 LPS transport system D LJF99_RS09135 PF03968 OstA-like protein LJF99_RS09140 PF00639 PPIC-type PPIASE domain LJF99_RS09140 PF09312 SurA N-terminal domain LJF99_RS09145 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LJF99_RS09150 PF00398 Ribosomal RNA adenine dimethylase LJF99_RS09155 PF04379 ApaG domain LJF99_RS09160 PF00149 Calcineurin-like phosphoesterase LJF99_RS09175 PF00296 Luciferase-like monooxygenase LJF99_RS09195 PF00501 AMP-binding enzyme LJF99_RS09195 PF13193 AMP-binding enzyme C-terminal domain LJF99_RS09200 PF07670 Nucleoside recognition LJF99_RS09205 PF01018 GTP1/OBG LJF99_RS09205 PF01926 50S ribosome-binding GTPase LJF99_RS09210 PF01016 Ribosomal L27 protein LJF99_RS09215 PF00829 Ribosomal prokaryotic L21 protein LJF99_RS09220 PF00348 Polyprenyl synthetase LJF99_RS09225 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) LJF99_RS09230 PF01145 SPFH domain / Band 7 family LJF99_RS09235 PF01145 SPFH domain / Band 7 family LJF99_RS09235 PF12221 Bacterial membrane protein N terminal LJF99_RS09240 PF16360 GTP-binding GTPase Middle Region LJF99_RS09240 PF13167 GTP-binding GTPase N-terminal LJF99_RS09240 PF01926 50S ribosome-binding GTPase LJF99_RS09245 PF17209 Hfq protein LJF99_RS09255 PF08676 MutL C terminal dimerisation domain LJF99_RS09255 PF01119 DNA mismatch repair protein, C-terminal domain LJF99_RS09260 PF01520 N-acetylmuramoyl-L-alanine amidase LJF99_RS09265 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LJF99_RS09270 PF01256 Carbohydrate kinase LJF99_RS09270 PF03853 YjeF-related protein N-terminus LJF99_RS09280 PF08331 Domain of unknown function (DUF1730) LJF99_RS09285 PF00480 ROK family LJF99_RS09295 PF00005 ABC transporter LJF99_RS09295 PF09383 NIL domain LJF99_RS09300 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS09305 PF03180 NLPA lipoprotein LJF99_RS09310 PF02357 Transcription termination factor nusG LJF99_RS09315 PF00672 HAMP domain LJF99_RS09315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS09315 PF12729 Four helix bundle sensory module for signal transduction LJF99_RS09330 PF00072 Response regulator receiver domain LJF99_RS09330 PF01627 Hpt domain LJF99_RS09330 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS09330 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LJF99_RS09330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS09330 PF00672 HAMP domain LJF99_RS09340 PF01966 HD domain LJF99_RS09345 PF00072 Response regulator receiver domain LJF99_RS09345 PF00989 PAS fold LJF99_RS09345 PF01627 Hpt domain LJF99_RS09345 PF18415 Histidine kinase receptor ArcB trans-membrane domain LJF99_RS09345 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS09345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS09370 PF03466 LysR substrate binding domain LJF99_RS09370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS09380 PF01259 SAICAR synthetase LJF99_RS09385 PF06804 NlpB/DapX lipoprotein LJF99_RS09390 PF00701 Dihydrodipicolinate synthetase family LJF99_RS09395 PF01842 ACT domain LJF99_RS09400 PF00578 AhpC/TSA family LJF99_RS09405 PF03887 YfbU domain LJF99_RS09410 PF04217 Protein of unknown function, DUF412 LJF99_RS09415 PF00871 Acetokinase family LJF99_RS09420 PF01515 Phosphate acetyl/butaryl transferase LJF99_RS09420 PF07085 DRTGG domain LJF99_RS09425 PF10369 Small subunit of acetolactate synthase LJF99_RS09430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LJF99_RS09430 PF00205 Thiamine pyrophosphate enzyme, central domain LJF99_RS09430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LJF99_RS09445 PF01569 PAP2 superfamily LJF99_RS09455 PF00682 HMGL-like LJF99_RS09455 PF08502 LeuA allosteric (dimerisation) domain LJF99_RS09460 PF00180 Isocitrate/isopropylmalate dehydrogenase LJF99_RS09465 PF00330 Aconitase family (aconitate hydratase) LJF99_RS09470 PF00694 Aconitase C-terminal domain LJF99_RS09490 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS09495 PF00005 ABC transporter LJF99_RS09500 PF02562 PhoH-like protein LJF99_RS09500 PF13638 PIN domain LJF99_RS09510 PF02867 Ribonucleotide reductase, barrel domain LJF99_RS09510 PF00317 Ribonucleotide reductase, all-alpha domain LJF99_RS09510 PF08343 Ribonucleotide reductase N-terminal LJF99_RS09540 PF00271 Helicase conserved C-terminal domain LJF99_RS09540 PF12137 RNA polymerase recycling family C-terminal LJF99_RS09540 PF18339 RapA N-terminal Tudor like domain 1 LJF99_RS09540 PF18337 RapA N-terminal Tudor like domain LJF99_RS09540 PF00176 SNF2 family N-terminal domain LJF99_RS09545 PF00849 RNA pseudouridylate synthase LJF99_RS09555 PF00563 EAL domain LJF99_RS09555 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS09555 PF03707 Bacterial signalling protein N terminal repeat LJF99_RS09555 PF13188 PAS domain LJF99_RS09565 PF00118 TCP-1/cpn60 chaperonin family LJF99_RS09570 PF00166 Chaperonin 10 Kd subunit LJF99_RS09575 PF01554 MatE LJF99_RS09580 PF04186 FxsA cytoplasmic membrane protein LJF99_RS09585 PF00206 Lyase LJF99_RS09585 PF10415 Fumarase C C-terminus LJF99_RS09590 PF03605 Anaerobic c4-dicarboxylate membrane transporter LJF99_RS09595 PF00267 Gram-negative porin LJF99_RS09600 PF07690 Major Facilitator Superfamily LJF99_RS09605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS09605 PF03466 LysR substrate binding domain LJF99_RS09615 PF13302 Acetyltransferase (GNAT) domain LJF99_RS09620 PF13302 Acetyltransferase (GNAT) domain LJF99_RS09640 PF07690 Major Facilitator Superfamily LJF99_RS09645 PF01725 Ham1 family LJF99_RS09650 PF04055 Radical SAM superfamily LJF99_RS09650 PF06969 HemN C-terminal domain LJF99_RS09655 PF03889 Alternative ribosome-rescue factor A LJF99_RS09660 PF01872 RibD C-terminal domain LJF99_RS09665 PF13411 MerR HTH family regulatory protein LJF99_RS09670 PF02142 MGS-like domain LJF99_RS09670 PF01808 AICARFT/IMPCHase bienzyme LJF99_RS09675 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LJF99_RS09675 PF02844 Phosphoribosylglycinamide synthetase, N domain LJF99_RS09675 PF02843 Phosphoribosylglycinamide synthetase, C domain LJF99_RS09690 PF00128 Alpha amylase, catalytic domain LJF99_RS09705 PF13592 Winged helix-turn helix LJF99_RS09705 PF13358 DDE superfamily endonuclease LJF99_RS09715 PF04545 Sigma-70, region 4 LJF99_RS09715 PF04542 Sigma-70 region 2 LJF99_RS09715 PF03979 Sigma-70 factor, region 1.1 LJF99_RS09715 PF04539 Sigma-70 region 3 LJF99_RS09715 PF04546 Sigma-70, non-essential region LJF99_RS09715 PF00140 Sigma-70 factor, region 1.2 LJF99_RS09720 PF10410 DnaB-helicase binding domain of primase LJF99_RS09720 PF08278 DNA primase DnaG DnaB-binding LJF99_RS09720 PF08275 DNA primase catalytic core, N-terminal domain LJF99_RS09720 PF01807 CHC2 zinc finger LJF99_RS09725 PF09424 Yqey-like protein LJF99_RS09730 PF01165 Ribosomal protein S21 LJF99_RS09735 PF00814 Glycoprotease family LJF99_RS09740 PF04539 Sigma-70 region 3 LJF99_RS09740 PF04545 Sigma-70, region 4 LJF99_RS09740 PF04542 Sigma-70 region 2 LJF99_RS09740 PF00140 Sigma-70 factor, region 1.2 LJF99_RS09745 PF01476 LysM domain LJF99_RS09745 PF01551 Peptidase family M23 LJF99_RS09750 PF09335 SNARE associated Golgi protein LJF99_RS09760 PF01975 Survival protein SurE LJF99_RS09765 PF01142 tRNA pseudouridine synthase D (TruD) LJF99_RS09770 PF02542 YgbB family LJF99_RS09775 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LJF99_RS09780 PF04977 Septum formation initiator LJF99_RS09785 PF03952 Enolase, N-terminal domain LJF99_RS09785 PF00113 Enolase, C-terminal TIM barrel domain LJF99_RS09790 PF00117 Glutamine amidotransferase class-I LJF99_RS09790 PF06418 CTP synthase N-terminus LJF99_RS09795 PF03819 MazG nucleotide pyrophosphohydrolase domain LJF99_RS09800 PF02824 TGS domain LJF99_RS09800 PF13291 ACT domain LJF99_RS09800 PF04607 Region found in RelA / SpoT proteins LJF99_RS09805 PF01938 TRAM domain LJF99_RS09805 PF05958 tRNA (Uracil-5-)-methyltransferase LJF99_RS09810 PF00072 Response regulator receiver domain LJF99_RS09810 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS09810 PF01627 Hpt domain LJF99_RS09810 PF00672 HAMP domain LJF99_RS09810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS09810 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LJF99_RS09815 PF07308 Protein of unknown function (DUF1456) LJF99_RS09820 PF01510 N-acetylmuramoyl-L-alanine amidase LJF99_RS09825 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LJF99_RS09830 PF02565 Recombination protein O C terminal LJF99_RS09830 PF11967 Recombination protein O N terminal LJF99_RS09835 PF01926 50S ribosome-binding GTPase LJF99_RS09835 PF07650 KH domain LJF99_RS09840 PF14622 Ribonuclease-III-like LJF99_RS09840 PF00035 Double-stranded RNA binding motif LJF99_RS09845 PF10502 Signal peptidase, peptidase S26 LJF99_RS09850 PF00679 Elongation factor G C-terminus LJF99_RS09850 PF03144 Elongation factor Tu domain 2 LJF99_RS09850 PF06421 GTP-binding protein LepA C-terminus LJF99_RS09850 PF00009 Elongation factor Tu GTP binding domain LJF99_RS09860 PF03888 MucB/RseB N-terminal domain LJF99_RS09860 PF17188 MucB/RseB C-terminal domain LJF99_RS09865 PF03873 Anti sigma-E protein RseA, C-terminal domain LJF99_RS09865 PF03872 Anti sigma-E protein RseA, N-terminal domain LJF99_RS09870 PF08281 Sigma-70, region 4 LJF99_RS09870 PF04542 Sigma-70 region 2 LJF99_RS09875 PF00890 FAD binding domain LJF99_RS09875 PF02910 Fumarate reductase flavoprotein C-term LJF99_RS09885 PF03937 Flavinator of succinate dehydrogenase LJF99_RS09890 PF01571 Aminomethyltransferase folate-binding domain LJF99_RS09910 PF03091 CutA1 divalent ion tolerance protein LJF99_RS09915 PF11412 Disulphide bond corrector protein DsbC LJF99_RS09915 PF02683 Cytochrome C biogenesis protein transmembrane region LJF99_RS09925 PF01266 FAD dependent oxidoreductase LJF99_RS09930 PF01116 Fructose-bisphosphate aldolase class-II LJF99_RS09935 PF00162 Phosphoglycerate kinase LJF99_RS09940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LJF99_RS09940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LJF99_RS09945 PF00480 ROK family LJF99_RS09960 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LJF99_RS09975 PF00005 ABC transporter LJF99_RS09995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS09995 PF08447 PAS fold LJF99_RS10000 PF13358 DDE superfamily endonuclease LJF99_RS10000 PF13592 Winged helix-turn helix LJF99_RS10015 PF02080 TrkA-C domain LJF99_RS10015 PF03600 Citrate transporter LJF99_RS10020 PF00009 Elongation factor Tu GTP binding domain LJF99_RS10025 PF01507 Phosphoadenosine phosphosulfate reductase family LJF99_RS10030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LJF99_RS10030 PF14824 Sirohaem biosynthesis protein central LJF99_RS10030 PF10414 Sirohaem synthase dimerisation region LJF99_RS10035 PF16200 C-terminal region of band_7 LJF99_RS10035 PF01145 SPFH domain / Band 7 family LJF99_RS10040 PF01957 NfeD-like C-terminal, partner-binding LJF99_RS10045 PF00571 CBS domain LJF99_RS10045 PF01380 SIS domain LJF99_RS10050 PF00005 ABC transporter LJF99_RS10050 PF12848 ABC transporter LJF99_RS10060 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LJF99_RS10120 PF13592 Winged helix-turn helix LJF99_RS10120 PF13358 DDE superfamily endonuclease LJF99_RS10130 PF13411 MerR HTH family regulatory protein LJF99_RS10140 PF00474 Sodium:solute symporter family LJF99_RS10145 PF03734 L,D-transpeptidase catalytic domain LJF99_RS10145 PF17969 L,D-transpeptidase C-terminal domain LJF99_RS10150 PF00924 Mechanosensitive ion channel LJF99_RS10155 PF00871 Acetokinase family LJF99_RS10160 PF04074 YhcH/YjgK/YiaL LJF99_RS10170 PF01177 Asp/Glu/Hydantoin racemase LJF99_RS10175 PF01810 LysE type translocator LJF99_RS10210 PF00209 Sodium:neurotransmitter symporter family LJF99_RS10220 PF00209 Sodium:neurotransmitter symporter family LJF99_RS10240 PF07690 Major Facilitator Superfamily LJF99_RS10255 PF01037 Lrp/AsnC ligand binding domain LJF99_RS10270 PF01047 MarR family LJF99_RS10275 PF02566 OsmC-like protein LJF99_RS10280 PF16884 N-terminal domain of oxidoreductase LJF99_RS10280 PF00107 Zinc-binding dehydrogenase LJF99_RS10285 PF00293 NUDIX domain LJF99_RS10300 PF03710 Glutamate-ammonia ligase adenylyltransferase LJF99_RS10300 PF08335 GlnD PII-uridylyltransferase LJF99_RS10305 PF08220 DeoR-like helix-turn-helix domain LJF99_RS10305 PF00455 DeoR C terminal sensor domain LJF99_RS10315 PF00106 short chain dehydrogenase LJF99_RS10320 PF03829 PTS system glucitol/sorbitol-specific IIA component LJF99_RS10325 PF03612 Sorbitol phosphotransferase enzyme II N-terminus LJF99_RS10325 PF07663 Sorbitol phosphotransferase enzyme II C-terminus LJF99_RS10330 PF03608 PTS system enzyme II sorbitol-specific factor LJF99_RS10335 PF08335 GlnD PII-uridylyltransferase LJF99_RS10335 PF03710 Glutamate-ammonia ligase adenylyltransferase LJF99_RS10355 PF05170 AsmA family LJF99_RS10360 PF00326 Prolyl oligopeptidase family LJF99_RS10360 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LJF99_RS10365 PF00005 ABC transporter LJF99_RS10365 PF02687 FtsX-like permease family LJF99_RS10365 PF12704 MacB-like periplasmic core domain LJF99_RS10370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LJF99_RS10375 PF00072 Response regulator receiver domain LJF99_RS10375 PF00486 Transcriptional regulatory protein, C terminal LJF99_RS10380 PF16527 Two-component sensor protein CpxA, periplasmic domain LJF99_RS10380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS10380 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS10380 PF00672 HAMP domain LJF99_RS10385 PF09297 NADH pyrophosphatase zinc ribbon domain LJF99_RS10385 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LJF99_RS10385 PF00293 NUDIX domain LJF99_RS10420 PF03060 Nitronate monooxygenase LJF99_RS10430 PF00445 Ribonuclease T2 family LJF99_RS10450 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase LJF99_RS10465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS10465 PF03466 LysR substrate binding domain LJF99_RS10470 PF00270 DEAD/DEAH box helicase LJF99_RS10470 PF00271 Helicase conserved C-terminal domain LJF99_RS10480 PF00753 Metallo-beta-lactamase superfamily LJF99_RS10490 PF01425 Amidase LJF99_RS10495 PF04371 Porphyromonas-type peptidyl-arginine deiminase LJF99_RS10500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS10500 PF03466 LysR substrate binding domain LJF99_RS10505 PF00106 short chain dehydrogenase LJF99_RS10520 PF00378 Enoyl-CoA hydratase/isomerase LJF99_RS10525 PF10952 Protein of unknown function (DUF2753) LJF99_RS10530 PF00132 Bacterial transferase hexapeptide (six repeats) LJF99_RS10540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LJF99_RS10555 PF02594 Uncharacterised ACR, YggU family COG1872 LJF99_RS10560 PF02325 YGGT family LJF99_RS10565 PF03807 NADP oxidoreductase coenzyme F420-dependent LJF99_RS10565 PF14748 Pyrroline-5-carboxylate reductase dimerisation LJF99_RS10570 PF01168 Alanine racemase, N-terminal domain LJF99_RS10575 PF00437 Type II/IV secretion system protein LJF99_RS10580 PF00437 Type II/IV secretion system protein LJF99_RS10585 PF03883 Peroxide stress protein YaaA LJF99_RS10590 PF00270 DEAD/DEAH box helicase LJF99_RS10590 PF00271 Helicase conserved C-terminal domain LJF99_RS10595 PF05175 Methyltransferase small domain LJF99_RS10600 PF05525 Branched-chain amino acid transport protein LJF99_RS10615 PF01475 Ferric uptake regulator family LJF99_RS10620 PF01207 Dihydrouridine synthase (Dus) LJF99_RS10635 PF00216 Bacterial DNA-binding protein LJF99_RS10645 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LJF99_RS10650 PF07238 PilZ domain LJF99_RS10655 PF18073 Rubredoxin metal binding domain LJF99_RS10670 PF18429 Domain of unknown function (DUF5609) LJF99_RS10680 PF01048 Phosphorylase superfamily LJF99_RS10685 PF01676 Metalloenzyme superfamily LJF99_RS10690 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LJF99_RS10690 PF00591 Glycosyl transferase family, a/b domain LJF99_RS10690 PF02885 Glycosyl transferase family, helical bundle domain LJF99_RS10695 PF01791 DeoC/LacD family aldolase LJF99_RS10705 PF07662 Na+ dependent nucleoside transporter C-terminus LJF99_RS10705 PF01773 Na+ dependent nucleoside transporter N-terminus LJF99_RS10705 PF07670 Nucleoside recognition LJF99_RS10710 PF01026 TatD related DNase LJF99_RS10715 PF07963 Prokaryotic N-terminal methylation motif LJF99_RS10725 PF00583 Acetyltransferase (GNAT) family LJF99_RS10730 PF05958 tRNA (Uracil-5-)-methyltransferase LJF99_RS10730 PF01938 TRAM domain LJF99_RS10735 PF00909 Ammonium Transporter Family LJF99_RS10740 PF02661 Fic/DOC family LJF99_RS10740 PF13784 Fic/DOC family N-terminal LJF99_RS10765 PF08401 Domain of unknown function (DUF1738) LJF99_RS10765 PF18818 Metallopeptidase superfamily domain LJF99_RS10765 PF13362 Toprim domain LJF99_RS10785 PF10548 P22AR C-terminal domain LJF99_RS10785 PF08346 AntA/AntB antirepressor LJF99_RS10800 PF13592 Winged helix-turn helix LJF99_RS10800 PF13358 DDE superfamily endonuclease LJF99_RS10805 PF02321 Outer membrane efflux protein LJF99_RS10810 PF00294 pfkB family carbohydrate kinase LJF99_RS10810 PF01467 Cytidylyltransferase-like LJF99_RS10815 PF03279 Bacterial lipid A biosynthesis acyltransferase LJF99_RS10830 PF01865 Protein of unknown function DUF47 LJF99_RS10835 PF01384 Phosphate transporter family LJF99_RS10840 PF01743 Poly A polymerase head domain LJF99_RS10840 PF01966 HD domain LJF99_RS10840 PF12627 Probable RNA and SrmB- binding site of polymerase A LJF99_RS10845 PF01471 Putative peptidoglycan binding domain LJF99_RS10845 PF13401 AAA domain LJF99_RS10850 PF16537 Type II secretion system protein B LJF99_RS10855 PF00633 Helix-hairpin-helix motif LJF99_RS10855 PF10576 Iron-sulfur binding domain of endonuclease III LJF99_RS10855 PF00730 HhH-GPD superfamily base excision DNA repair protein LJF99_RS10855 PF14815 NUDIX domain LJF99_RS10860 PF04362 Bacterial Fe(2+) trafficking LJF99_RS10865 PF01464 Transglycosylase SLT domain LJF99_RS10865 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LJF99_RS10870 PF04076 Bacterial OB fold (BOF) protein LJF99_RS10875 PF00657 GDSL-like Lipase/Acylhydrolase LJF99_RS10885 PF01389 OmpA-like transmembrane domain LJF99_RS10885 PF00691 OmpA family LJF99_RS10890 PF03886 ABC-type transport auxiliary lipoprotein component LJF99_RS10895 PF02470 MlaD protein LJF99_RS10900 PF04403 Paraquat-inducible protein A LJF99_RS10905 PF17209 Hfq protein LJF99_RS10910 PF13419 Haloacid dehalogenase-like hydrolase LJF99_RS10925 PF00701 Dihydrodipicolinate synthetase family LJF99_RS10930 PF05175 Methyltransferase small domain LJF99_RS10930 PF08468 Methyltransferase small domain N-terminal LJF99_RS10935 PF00483 Nucleotidyl transferase LJF99_RS10940 PF08323 Starch synthase catalytic domain LJF99_RS10940 PF00534 Glycosyl transferases group 1 LJF99_RS10980 PF03553 Na+/H+ antiporter family LJF99_RS10990 PF14602 Hexapeptide repeat of succinyl-transferase LJF99_RS10990 PF12464 Maltose acetyltransferase LJF99_RS10995 PF00128 Alpha amylase, catalytic domain LJF99_RS10995 PF11941 Domain of unknown function (DUF3459) LJF99_RS11005 PF00356 Bacterial regulatory proteins, lacI family LJF99_RS11015 PF02378 Phosphotransferase system, EIIC LJF99_RS11020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LJF99_RS11025 PF02378 Phosphotransferase system, EIIC LJF99_RS11030 PF00232 Glycosyl hydrolase family 1 LJF99_RS11035 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LJF99_RS11040 PF00480 ROK family LJF99_RS11050 PF00356 Bacterial regulatory proteins, lacI family LJF99_RS11060 PF00710 Asparaginase, N-terminal LJF99_RS11060 PF17763 Glutaminase/Asparaginase C-terminal domain LJF99_RS11075 PF02142 MGS-like domain LJF99_RS11085 PF00210 Ferritin-like domain LJF99_RS11100 PF05127 Helicase LJF99_RS11100 PF17176 tRNA-binding domain LJF99_RS11100 PF13718 GNAT acetyltransferase 2 LJF99_RS11100 PF08351 Domain of unknown function (DUF1726) LJF99_RS11105 PF00106 short chain dehydrogenase LJF99_RS11110 PF01584 CheW-like domain LJF99_RS11110 PF00072 Response regulator receiver domain LJF99_RS11120 PF07670 Nucleoside recognition LJF99_RS11220 PF02660 Glycerol-3-phosphate acyltransferase LJF99_RS11225 PF02152 Dihydroneopterin aldolase LJF99_RS11230 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LJF99_RS11240 PF07690 Major Facilitator Superfamily LJF99_RS11245 PF02492 CobW/HypB/UreG, nucleotide-binding domain LJF99_RS11245 PF07683 Cobalamin synthesis protein cobW C-terminal domain LJF99_RS11255 PF01810 LysE type translocator LJF99_RS11260 PF03466 LysR substrate binding domain LJF99_RS11260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS11265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS11265 PF03466 LysR substrate binding domain LJF99_RS11275 PF00563 EAL domain LJF99_RS11275 PF12792 CSS motif domain associated with EAL LJF99_RS11280 PF00330 Aconitase family (aconitate hydratase) LJF99_RS11280 PF06434 Aconitate hydratase 2 N-terminus LJF99_RS11280 PF11791 Aconitate B N-terminal domain LJF99_RS11295 PF12729 Four helix bundle sensory module for signal transduction LJF99_RS11295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS11295 PF00672 HAMP domain LJF99_RS11305 PF00563 EAL domain LJF99_RS11305 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS11305 PF08447 PAS fold LJF99_RS11305 PF08448 PAS fold LJF99_RS11305 PF13426 PAS domain LJF99_RS11305 PF05231 MASE1 LJF99_RS11310 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJF99_RS11310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LJF99_RS11315 PF02817 e3 binding domain LJF99_RS11315 PF00364 Biotin-requiring enzyme LJF99_RS11315 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LJF99_RS11320 PF00456 Transketolase, thiamine diphosphate binding domain LJF99_RS11320 PF17831 Pyruvate dehydrogenase E1 component middle domain LJF99_RS11325 PF07729 FCD domain LJF99_RS11325 PF00392 Bacterial regulatory proteins, gntR family LJF99_RS11330 PF01510 N-acetylmuramoyl-L-alanine amidase LJF99_RS11340 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LJF99_RS11340 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LJF99_RS11345 PF07963 Prokaryotic N-terminal methylation motif LJF99_RS11350 PF00437 Type II/IV secretion system protein LJF99_RS11350 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LJF99_RS11360 PF06750 Bacterial Peptidase A24 N-terminal domain LJF99_RS11360 PF01478 Type IV leader peptidase family LJF99_RS11365 PF01121 Dephospho-CoA kinase LJF99_RS11370 PF07072 Cell division protein LJF99_RS11375 PF03884 DNA gyrase inhibitor YacG LJF99_RS11380 PF00293 NUDIX domain LJF99_RS11390 PF02810 SEC-C motif LJF99_RS11390 PF07517 SecA DEAD-like domain LJF99_RS11390 PF01043 SecA preprotein cross-linking domain LJF99_RS11390 PF07516 SecA Wing and Scaffold domain LJF99_RS11400 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LJF99_RS11405 PF12327 FtsZ family, C-terminal domain LJF99_RS11405 PF00091 Tubulin/FtsZ family, GTPase domain LJF99_RS11410 PF02491 SHS2 domain inserted in FTSA LJF99_RS11415 PF08478 POTRA domain, FtsQ-type LJF99_RS11415 PF03799 Cell division protein FtsQ LJF99_RS11420 PF08245 Mur ligase middle domain LJF99_RS11420 PF01225 Mur ligase family, catalytic domain LJF99_RS11420 PF02875 Mur ligase family, glutamate ligase domain LJF99_RS11425 PF04101 Glycosyltransferase family 28 C-terminal domain LJF99_RS11425 PF03033 Glycosyltransferase family 28 N-terminal domain LJF99_RS11430 PF01098 Cell cycle protein LJF99_RS11435 PF02875 Mur ligase family, glutamate ligase domain LJF99_RS11435 PF08245 Mur ligase middle domain LJF99_RS11440 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LJF99_RS11440 PF00953 Glycosyl transferase family 4 LJF99_RS11445 PF08245 Mur ligase middle domain LJF99_RS11445 PF01225 Mur ligase family, catalytic domain LJF99_RS11445 PF02875 Mur ligase family, glutamate ligase domain LJF99_RS11450 PF08245 Mur ligase middle domain LJF99_RS11450 PF02875 Mur ligase family, glutamate ligase domain LJF99_RS11450 PF01225 Mur ligase family, catalytic domain LJF99_RS11455 PF00905 Penicillin binding protein transpeptidase domain LJF99_RS11455 PF03717 Penicillin-binding Protein dimerisation domain LJF99_RS11460 PF04999 Cell division protein FtsL LJF99_RS11465 PF01795 MraW methylase family LJF99_RS11470 PF02381 MraZ protein, putative antitoxin-like LJF99_RS11480 PF01464 Transglycosylase SLT domain LJF99_RS11480 PF01476 LysM domain LJF99_RS11485 PF13677 Membrane MotB of proton-channel complex MotA/MotB LJF99_RS11485 PF00691 OmpA family LJF99_RS11490 PF01618 MotA/TolQ/ExbB proton channel family LJF99_RS11515 PF02561 Flagellar protein FliS LJF99_RS11520 PF02465 Flagellar hook-associated protein 2 N-terminus LJF99_RS11520 PF07195 Flagellar hook-associated protein 2 C-terminus LJF99_RS11520 PF07196 Flagellin hook IN motif LJF99_RS11535 PF00700 Bacterial flagellin C-terminal helical region LJF99_RS11535 PF00669 Bacterial flagellin N-terminal helical region LJF99_RS11555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LJF99_RS11555 PF00460 Flagella basal body rod protein LJF99_RS11565 PF02119 Flagellar P-ring protein LJF99_RS11570 PF02107 Flagellar L-ring protein LJF99_RS11575 PF00460 Flagella basal body rod protein LJF99_RS11575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LJF99_RS11580 PF00460 Flagella basal body rod protein LJF99_RS11580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LJF99_RS11585 PF07559 Flagellar basal body protein FlaE LJF99_RS11585 PF00460 Flagella basal body rod protein LJF99_RS11585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LJF99_RS11595 PF03963 Flagellar hook capping protein - N-terminal region LJF99_RS11595 PF13860 FlgD Ig-like domain LJF99_RS11595 PF13861 FlgD Tudor-like domain LJF99_RS11600 PF00460 Flagella basal body rod protein LJF99_RS11600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LJF99_RS11605 PF00460 Flagella basal body rod protein LJF99_RS11615 PF04316 Anti-sigma-28 factor, FlgM LJF99_RS11630 PF18269 T3SS EscN ATPase C-terminal domain LJF99_RS11630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LJF99_RS11640 PF01706 FliG C-terminal domain LJF99_RS11640 PF14841 FliG middle domain LJF99_RS11640 PF14842 FliG N-terminal domain LJF99_RS11645 PF01514 Secretory protein of YscJ/FliF family LJF99_RS11645 PF08345 Flagellar M-ring protein C-terminal LJF99_RS11650 PF02049 Flagellar hook-basal body complex protein FliE LJF99_RS11655 PF02954 Bacterial regulatory protein, Fis family LJF99_RS11655 PF00158 Sigma-54 interaction domain LJF99_RS11655 PF00072 Response regulator receiver domain LJF99_RS11660 PF00771 FHIPEP family LJF99_RS11665 PF01312 FlhB HrpN YscU SpaS Family LJF99_RS11670 PF01311 Bacterial export proteins, family 1 LJF99_RS11675 PF01313 Bacterial export proteins, family 3 LJF99_RS11680 PF00813 FliP family LJF99_RS11685 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LJF99_RS11700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LJF99_RS11705 PF04348 LppC putative lipoprotein LJF99_RS11710 PF02021 Uncharacterised protein family UPF0102 LJF99_RS11715 PF13580 SIS domain LJF99_RS11720 PF04972 BON domain LJF99_RS11725 PF04386 Stringent starvation protein B LJF99_RS11730 PF00043 Glutathione S-transferase, C-terminal domain LJF99_RS11730 PF02798 Glutathione S-transferase, N-terminal domain LJF99_RS11735 PF02167 Cytochrome C1 family LJF99_RS11740 PF00032 Cytochrome b(C-terminal)/b6/petD LJF99_RS11740 PF00033 Cytochrome b/b6/petB LJF99_RS11745 PF00355 Rieske [2Fe-2S] domain LJF99_RS11745 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LJF99_RS11750 PF00380 Ribosomal protein S9/S16 LJF99_RS11755 PF00572 Ribosomal protein L13 LJF99_RS11760 PF03969 AFG1-like ATPase LJF99_RS11770 PF00595 PDZ domain LJF99_RS11770 PF13180 PDZ domain LJF99_RS11775 PF13180 PDZ domain LJF99_RS11805 PF01979 Amidohydrolase family LJF99_RS11810 PF03841 L-seryl-tRNA selenium transferase LJF99_RS11815 PF07071 KDGP aldolase LJF99_RS11825 PF00381 PTS HPr component phosphorylation site LJF99_RS11830 PF03668 P-loop ATPase protein family LJF99_RS11835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LJF99_RS11840 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LJF99_RS11845 PF00309 Sigma-54 factor, Activator interacting domain (AID) LJF99_RS11845 PF04963 Sigma-54 factor, core binding domain LJF99_RS11845 PF04552 Sigma-54, DNA binding domain LJF99_RS11850 PF00005 ABC transporter LJF99_RS11850 PF12399 Branched-chain amino acid ATP-binding cassette transporter LJF99_RS11855 PF03968 OstA-like protein LJF99_RS11860 PF06835 Lipopolysaccharide-assembly, LptC-related LJF99_RS11870 PF01380 SIS domain LJF99_RS11870 PF00571 CBS domain LJF99_RS11875 PF00005 ABC transporter LJF99_RS11880 PF02405 Permease MlaE LJF99_RS11885 PF02470 MlaD protein LJF99_RS11890 PF05494 MlaC protein LJF99_RS11900 PF01722 BolA-like protein LJF99_RS11905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LJF99_RS11910 PF01523 Putative modulator of DNA gyrase LJF99_RS11915 PF04751 Protein of unknown function (DUF615) LJF99_RS11925 PF04363 Protein of unknown function (DUF496) LJF99_RS11955 PF03144 Elongation factor Tu domain 2 LJF99_RS11955 PF03143 Elongation factor Tu C-terminal domain LJF99_RS11955 PF00009 Elongation factor Tu GTP binding domain LJF99_RS11960 PF00679 Elongation factor G C-terminus LJF99_RS11960 PF14492 Elongation Factor G, domain II LJF99_RS11960 PF03764 Elongation factor G, domain IV LJF99_RS11960 PF00009 Elongation factor Tu GTP binding domain LJF99_RS11960 PF03144 Elongation factor Tu domain 2 LJF99_RS11965 PF00177 Ribosomal protein S7p/S5e LJF99_RS11970 PF00164 Ribosomal protein S12/S23 LJF99_RS11975 PF04077 DsrH like protein LJF99_RS11980 PF02635 DsrE/DsrF-like family LJF99_RS11985 PF02635 DsrE/DsrF-like family LJF99_RS11990 PF01042 Endoribonuclease L-PSP LJF99_RS11995 PF08348 YheO-like PAS domain LJF99_RS11995 PF13309 HTH domain LJF99_RS12000 PF04998 RNA polymerase Rpb1, domain 5 LJF99_RS12000 PF00623 RNA polymerase Rpb1, domain 2 LJF99_RS12000 PF05000 RNA polymerase Rpb1, domain 4 LJF99_RS12000 PF04983 RNA polymerase Rpb1, domain 3 LJF99_RS12000 PF04997 RNA polymerase Rpb1, domain 1 LJF99_RS12005 PF04563 RNA polymerase beta subunit LJF99_RS12005 PF04561 RNA polymerase Rpb2, domain 2 LJF99_RS12005 PF04565 RNA polymerase Rpb2, domain 3 LJF99_RS12005 PF10385 RNA polymerase beta subunit external 1 domain LJF99_RS12005 PF00562 RNA polymerase Rpb2, domain 6 LJF99_RS12005 PF04560 RNA polymerase Rpb2, domain 7 LJF99_RS12010 PF00542 Ribosomal protein L7/L12 C-terminal domain LJF99_RS12010 PF16320 Ribosomal protein L7/L12 dimerisation domain LJF99_RS12015 PF00466 Ribosomal protein L10 LJF99_RS12020 PF00687 Ribosomal protein L1p/L10e family LJF99_RS12025 PF00298 Ribosomal protein L11, RNA binding domain LJF99_RS12025 PF03946 Ribosomal protein L11, N-terminal domain LJF99_RS12030 PF02357 Transcription termination factor nusG LJF99_RS12030 PF00467 KOW motif LJF99_RS12035 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LJF99_RS12045 PF03143 Elongation factor Tu C-terminal domain LJF99_RS12045 PF03144 Elongation factor Tu domain 2 LJF99_RS12045 PF00009 Elongation factor Tu GTP binding domain LJF99_RS12060 PF00485 Phosphoribulokinase / Uridine kinase family LJF99_RS12065 PF02237 Biotin protein ligase C terminal domain LJF99_RS12065 PF03099 Biotin/lipoate A/B protein ligase family LJF99_RS12065 PF08279 HTH domain LJF99_RS12070 PF01565 FAD binding domain LJF99_RS12070 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LJF99_RS12075 PF02254 TrkA-N domain LJF99_RS12075 PF02080 TrkA-C domain LJF99_RS12080 PF02386 Cation transport protein LJF99_RS12085 PF01131 DNA topoisomerase LJF99_RS12085 PF01751 Toprim domain LJF99_RS12090 PF03264 NapC/NirT cytochrome c family, N-terminal region LJF99_RS12095 PF00384 Molybdopterin oxidoreductase LJF99_RS12095 PF01568 Molydopterin dinucleotide binding domain LJF99_RS12095 PF18364 Molybdopterin oxidoreductase N-terminal domain LJF99_RS12105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS12110 PF00486 Transcriptional regulatory protein, C terminal LJF99_RS12110 PF00072 Response regulator receiver domain LJF99_RS12125 PF01794 Ferric reductase like transmembrane component LJF99_RS12130 PF00174 Oxidoreductase molybdopterin binding domain LJF99_RS12135 PF06496 Protein of unknown function (DUF1097) LJF99_RS12140 PF00072 Response regulator receiver domain LJF99_RS12140 PF00158 Sigma-54 interaction domain LJF99_RS12150 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS12150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS12170 PF01743 Poly A polymerase head domain LJF99_RS12170 PF01368 DHH family LJF99_RS12170 PF00571 CBS domain LJF99_RS12170 PF02272 DHHA1 domain LJF99_RS12185 PF01037 Lrp/AsnC ligand binding domain LJF99_RS12190 PF03590 Aspartate-ammonia ligase LJF99_RS12195 PF02861 Clp amino terminal domain, pathogenicity island component LJF99_RS12195 PF17871 AAA lid domain LJF99_RS12195 PF10431 C-terminal, D2-small domain, of ClpB protein LJF99_RS12195 PF07724 AAA domain (Cdc48 subfamily) LJF99_RS12195 PF00004 ATPase family associated with various cellular activities (AAA) LJF99_RS12200 PF02578 Multi-copper polyphenol oxidoreductase laccase LJF99_RS12205 PF00849 RNA pseudouridylate synthase LJF99_RS12205 PF01479 S4 domain LJF99_RS12210 PF13525 Outer membrane lipoprotein LJF99_RS12215 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJF99_RS12215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LJF99_RS12220 PF00375 Sodium:dicarboxylate symporter family LJF99_RS12225 PF03313 Serine dehydratase alpha chain LJF99_RS12230 PF13309 HTH domain LJF99_RS12230 PF08348 YheO-like PAS domain LJF99_RS12240 PF02233 NAD(P) transhydrogenase beta subunit LJF99_RS12245 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LJF99_RS12245 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LJF99_RS12245 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LJF99_RS12250 PF00465 Iron-containing alcohol dehydrogenase LJF99_RS12255 PF12833 Helix-turn-helix domain LJF99_RS12255 PF06719 AraC-type transcriptional regulator N-terminus LJF99_RS12260 PF08212 Lipocalin-like domain LJF99_RS12265 PF02743 Cache domain LJF99_RS12265 PF00672 HAMP domain LJF99_RS12265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS12270 PF02666 Phosphatidylserine decarboxylase LJF99_RS12285 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LJF99_RS12285 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LJF99_RS12290 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LJF99_RS12290 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LJF99_RS12295 PF02863 Arginine repressor, C-terminal domain LJF99_RS12295 PF01316 Arginine repressor, DNA binding domain LJF99_RS12300 PF03606 C4-dicarboxylate anaerobic carrier LJF99_RS12305 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LJF99_RS12305 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LJF99_RS12310 PF00696 Amino acid kinase family LJF99_RS12335 PF02743 Cache domain LJF99_RS12335 PF00672 HAMP domain LJF99_RS12335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS12345 PF00005 ABC transporter LJF99_RS12350 PF13407 Periplasmic binding protein domain LJF99_RS12360 PF00356 Bacterial regulatory proteins, lacI family LJF99_RS12365 PF16363 GDP-mannose 4,6 dehydratase LJF99_RS12370 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LJF99_RS12370 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LJF99_RS12375 PF10509 Galactokinase galactose-binding signature LJF99_RS12375 PF08544 GHMP kinases C terminal LJF99_RS12375 PF00288 GHMP kinases N terminal domain LJF99_RS12380 PF01263 Aldose 1-epimerase LJF99_RS12385 PF00248 Aldo/keto reductase family LJF99_RS12390 PF02673 Bacitracin resistance protein BacA LJF99_RS12400 PF04542 Sigma-70 region 2 LJF99_RS12400 PF04545 Sigma-70, region 4 LJF99_RS12410 PF03485 Arginyl tRNA synthetase N terminal domain LJF99_RS12410 PF05746 DALR anticodon binding domain LJF99_RS12410 PF00750 tRNA synthetases class I (R) LJF99_RS12420 PF00227 Proteasome subunit LJF99_RS12425 PF10431 C-terminal, D2-small domain, of ClpB protein LJF99_RS12425 PF07724 AAA domain (Cdc48 subfamily) LJF99_RS12425 PF00004 ATPase family associated with various cellular activities (AAA) LJF99_RS12430 PF07690 Major Facilitator Superfamily LJF99_RS12435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS12435 PF03466 LysR substrate binding domain LJF99_RS12440 PF04324 BFD-like [2Fe-2S] binding domain LJF99_RS12440 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LJF99_RS12440 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LJF99_RS12440 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJF99_RS12440 PF18267 Rubredoxin NAD+ reductase C-terminal domain LJF99_RS12450 PF13806 Rieske-like [2Fe-2S] domain LJF99_RS12455 PF01226 Formate/nitrite transporter LJF99_RS12460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LJF99_RS12460 PF14824 Sirohaem biosynthesis protein central LJF99_RS12460 PF10414 Sirohaem synthase dimerisation region LJF99_RS12465 PF01769 Divalent cation transporter LJF99_RS12465 PF00571 CBS domain LJF99_RS12465 PF03448 MgtE intracellular N domain LJF99_RS12475 PF03737 Aldolase/RraA LJF99_RS12480 PF02592 Putative vitamin uptake transporter LJF99_RS12490 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LJF99_RS12495 PF00034 Cytochrome c LJF99_RS12500 PF00270 DEAD/DEAH box helicase LJF99_RS12500 PF00271 Helicase conserved C-terminal domain LJF99_RS12500 PF00570 HRDC domain LJF99_RS12500 PF16124 RecQ zinc-binding LJF99_RS12500 PF09382 RQC domain LJF99_RS12505 PF03061 Thioesterase superfamily LJF99_RS12520 PF03475 3-alpha domain LJF99_RS12520 PF03473 MOSC domain LJF99_RS12525 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS12530 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS12535 PF08402 TOBE domain LJF99_RS12535 PF00005 ABC transporter LJF99_RS12540 PF13416 Bacterial extracellular solute-binding protein LJF99_RS12545 PF13416 Bacterial extracellular solute-binding protein LJF99_RS12550 PF00202 Aminotransferase class-III LJF99_RS12555 PF00120 Glutamine synthetase, catalytic domain LJF99_RS12560 PF01258 Prokaryotic dksA/traR C4-type zinc finger LJF99_RS12570 PF05981 CreA protein LJF99_RS12575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LJF99_RS12575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LJF99_RS12580 PF00012 Hsp70 protein LJF99_RS12595 PF00128 Alpha amylase, catalytic domain LJF99_RS12595 PF02903 Alpha amylase, N-terminal ig-like domain LJF99_RS12600 PF02719 Polysaccharide biosynthesis protein LJF99_RS12610 PF13592 Winged helix-turn helix LJF99_RS12610 PF13358 DDE superfamily endonuclease LJF99_RS12620 PF01501 Glycosyl transferase family 8 LJF99_RS12620 PF08437 Glycosyl transferase family 8 C-terminal LJF99_RS12640 PF13193 AMP-binding enzyme C-terminal domain LJF99_RS12640 PF00501 AMP-binding enzyme LJF99_RS12660 PF02348 Cytidylyltransferase LJF99_RS12670 PF03102 NeuB family LJF99_RS12670 PF08666 SAF domain LJF99_RS12740 PF05958 tRNA (Uracil-5-)-methyltransferase LJF99_RS12745 PF00072 Response regulator receiver domain LJF99_RS12745 PF00486 Transcriptional regulatory protein, C terminal LJF99_RS12750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS12750 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS12750 PF00672 HAMP domain LJF99_RS12760 PF00390 Malic enzyme, N-terminal domain LJF99_RS12760 PF03949 Malic enzyme, NAD binding domain LJF99_RS12765 PF11066 Protein of unknown function (DUF2867) LJF99_RS12765 PF13460 NAD(P)H-binding LJF99_RS12770 PF01197 Ribosomal protein L31 LJF99_RS12775 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LJF99_RS12775 PF18074 Primosomal protein N C-terminal domain LJF99_RS12775 PF00271 Helicase conserved C-terminal domain LJF99_RS12775 PF00270 DEAD/DEAH box helicase LJF99_RS12775 PF17764 3′ DNA-binding domain (3′BD) LJF99_RS12785 PF00440 Bacterial regulatory proteins, tetR family LJF99_RS12795 PF00691 OmpA family LJF99_RS12795 PF01389 OmpA-like transmembrane domain LJF99_RS12800 PF00291 Pyridoxal-phosphate dependent enzyme LJF99_RS12800 PF00585 C-terminal regulatory domain of Threonine dehydratase LJF99_RS12805 PF00920 Dehydratase family LJF99_RS12810 PF01063 Amino-transferase class IV LJF99_RS12820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LJF99_RS12820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LJF99_RS12820 PF00205 Thiamine pyrophosphate enzyme, central domain LJF99_RS12830 PF01553 Acyltransferase LJF99_RS12835 PF04463 Protein of unknown function (DUF523) LJF99_RS12845 PF00857 Isochorismatase family LJF99_RS12850 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LJF99_RS12850 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LJF99_RS12860 PF00005 ABC transporter LJF99_RS12865 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS12870 PF01323 DSBA-like thioredoxin domain LJF99_RS12875 PF01636 Phosphotransferase enzyme family LJF99_RS12880 PF12801 4Fe-4S binding domain LJF99_RS12880 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LJF99_RS12880 PF13746 4Fe-4S dicluster domain LJF99_RS12885 PF06288 Protein of unknown function (DUF1040) LJF99_RS12890 PF01590 GAF domain LJF99_RS12890 PF00360 Phytochrome region LJF99_RS12890 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS12890 PF00563 EAL domain LJF99_RS12895 PF13411 MerR HTH family regulatory protein LJF99_RS12900 PF00403 Heavy-metal-associated domain LJF99_RS12905 PF00156 Phosphoribosyl transferase domain LJF99_RS12910 PF01138 3' exoribonuclease family, domain 1 LJF99_RS12910 PF03725 3' exoribonuclease family, domain 2 LJF99_RS12915 PF08340 Domain of unknown function (DUF1732) LJF99_RS12915 PF03755 YicC-like family, N-terminal region LJF99_RS12930 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) LJF99_RS12945 PF00534 Glycosyl transferases group 1 LJF99_RS12945 PF13439 Glycosyltransferase Family 4 LJF99_RS12950 PF01370 NAD dependent epimerase/dehydratase family LJF99_RS12955 PF00440 Bacterial regulatory proteins, tetR family LJF99_RS12955 PF08360 QacR-like protein, C-terminal region LJF99_RS12960 PF00155 Aminotransferase class I and II LJF99_RS12965 PF08240 Alcohol dehydrogenase GroES-like domain LJF99_RS12965 PF00107 Zinc-binding dehydrogenase LJF99_RS12980 PF00580 UvrD/REP helicase N-terminal domain LJF99_RS12980 PF13361 UvrD-like helicase C-terminal domain LJF99_RS12985 PF00266 Aminotransferase class-V LJF99_RS12990 PF02657 Fe-S metabolism associated domain LJF99_RS12995 PF00899 ThiF family LJF99_RS13025 PF12724 Flavodoxin domain LJF99_RS13030 PF02386 Cation transport protein LJF99_RS13035 PF09186 Domain of unknown function (DUF1949) LJF99_RS13035 PF01205 Uncharacterized protein family UPF0029 LJF99_RS13040 PF00557 Metallopeptidase family M24 LJF99_RS13045 PF00501 AMP-binding enzyme LJF99_RS13045 PF13193 AMP-binding enzyme C-terminal domain LJF99_RS13050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LJF99_RS13050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LJF99_RS13050 PF00378 Enoyl-CoA hydratase/isomerase LJF99_RS13055 PF02803 Thiolase, C-terminal domain LJF99_RS13055 PF00108 Thiolase, N-terminal domain LJF99_RS13060 PF00486 Transcriptional regulatory protein, C terminal LJF99_RS13060 PF00072 Response regulator receiver domain LJF99_RS13065 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS13065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS13065 PF00672 HAMP domain LJF99_RS13070 PF01547 Bacterial extracellular solute-binding protein LJF99_RS13080 PF01206 Sulfurtransferase TusA LJF99_RS13085 PF01042 Endoribonuclease L-PSP LJF99_RS13090 PF00691 OmpA family LJF99_RS13090 PF13488 Glycine zipper LJF99_RS13095 PF03352 Methyladenine glycosylase LJF99_RS13100 PF02091 Glycyl-tRNA synthetase alpha subunit LJF99_RS13105 PF05746 DALR anticodon binding domain LJF99_RS13105 PF02092 Glycyl-tRNA synthetase beta subunit LJF99_RS13110 PF11008 Protein of unknown function (DUF2846) LJF99_RS13115 PF01202 Shikimate kinase LJF99_RS13125 PF13426 PAS domain LJF99_RS13125 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS13125 PF00563 EAL domain LJF99_RS13130 PF03496 ADP-ribosyltransferase exoenzyme LJF99_RS13130 PF03545 Yersinia virulence determinant (YopE) LJF99_RS13135 PF05932 Tir chaperone protein (CesT) family LJF99_RS13140 PF03222 Tryptophan/tyrosine permease family LJF99_RS13145 PF12801 4Fe-4S binding domain LJF99_RS13155 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJF99_RS13155 PF18113 Rubredoxin binding C-terminal domain LJF99_RS13160 PF00258 Flavodoxin LJF99_RS13160 PF00753 Metallo-beta-lactamase superfamily LJF99_RS13160 PF00301 Rubredoxin LJF99_RS13165 PF00158 Sigma-54 interaction domain LJF99_RS13165 PF01590 GAF domain LJF99_RS13170 PF00392 Bacterial regulatory proteins, gntR family LJF99_RS13170 PF07702 UTRA domain LJF99_RS13175 PF02378 Phosphotransferase system, EIIC LJF99_RS13175 PF00367 phosphotransferase system, EIIB LJF99_RS13180 PF02056 Family 4 glycosyl hydrolase LJF99_RS13180 PF11975 Family 4 glycosyl hydrolase C-terminal domain LJF99_RS13185 PF00356 Bacterial regulatory proteins, lacI family LJF99_RS13190 PF13458 Periplasmic binding protein LJF99_RS13195 PF02653 Branched-chain amino acid transport system / permease component LJF99_RS13200 PF02653 Branched-chain amino acid transport system / permease component LJF99_RS13200 PF11862 Domain of unknown function (DUF3382) LJF99_RS13205 PF00005 ABC transporter LJF99_RS13205 PF12399 Branched-chain amino acid ATP-binding cassette transporter LJF99_RS13210 PF00005 ABC transporter LJF99_RS13220 PF01810 LysE type translocator LJF99_RS13225 PF00581 Rhodanese-like domain LJF99_RS13230 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LJF99_RS13230 PF01694 Rhomboid family LJF99_RS13235 PF12262 Bacterial virulence factor lipase N-terminal LJF99_RS13240 PF04380 Membrane fusogenic activity LJF99_RS13245 PF00175 Oxidoreductase NAD-binding domain LJF99_RS13250 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LJF99_RS13260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LJF99_RS13260 PF07498 Rho termination factor, N-terminal domain LJF99_RS13260 PF07497 Rho termination factor, RNA-binding domain LJF99_RS13265 PF00085 Thioredoxin LJF99_RS13270 PF00270 DEAD/DEAH box helicase LJF99_RS13270 PF00271 Helicase conserved C-terminal domain LJF99_RS13275 PF02541 Ppx/GppA phosphatase family LJF99_RS13285 PF04445 Putative SAM-dependent methyltransferase LJF99_RS13290 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJF99_RS13295 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS13295 PF00563 EAL domain LJF99_RS13295 PF03707 Bacterial signalling protein N terminal repeat LJF99_RS13300 PF01432 Peptidase family M3 LJF99_RS13305 PF00490 Delta-aminolevulinic acid dehydratase LJF99_RS13310 PF01026 TatD related DNase LJF99_RS13315 PF00902 Sec-independent protein translocase protein (TatC) LJF99_RS13320 PF02416 mttA/Hcf106 family LJF99_RS13325 PF02416 mttA/Hcf106 family LJF99_RS13330 PF03109 ABC1 family LJF99_RS13335 PF02036 SCP-2 sterol transfer family LJF99_RS13340 PF01209 ubiE/COQ5 methyltransferase family LJF99_RS13345 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LJF99_RS13390 PF03544 Gram-negative bacterial TonB protein C-terminal LJF99_RS13395 PF02472 Biopolymer transport protein ExbD/TolR LJF99_RS13400 PF01618 MotA/TolQ/ExbB proton channel family LJF99_RS13405 PF01618 MotA/TolQ/ExbB proton channel family LJF99_RS13415 PF03472 Autoinducer binding domain LJF99_RS13415 PF00196 Bacterial regulatory proteins, luxR family LJF99_RS13430 PF02384 N-6 DNA Methylase LJF99_RS13435 PF13592 Winged helix-turn helix LJF99_RS13435 PF13358 DDE superfamily endonuclease LJF99_RS13440 PF01420 Type I restriction modification DNA specificity domain LJF99_RS13445 PF01695 IstB-like ATP binding protein LJF99_RS13450 PF00665 Integrase core domain LJF99_RS13455 PF01420 Type I restriction modification DNA specificity domain LJF99_RS13475 PF15978 Tn7-like transposition protein D LJF99_RS13475 PF06527 TniQ LJF99_RS13485 PF15978 Tn7-like transposition protein D LJF99_RS13485 PF06527 TniQ LJF99_RS13490 PF11426 Tn7 transposition regulator TnsC LJF99_RS13490 PF13401 AAA domain LJF99_RS13495 PF13401 AAA domain LJF99_RS13495 PF11426 Tn7 transposition regulator TnsC LJF99_RS13500 PF00665 Integrase core domain LJF99_RS13505 PF08721 TnsA endonuclease C terminal LJF99_RS13505 PF08722 TnsA endonuclease N terminal LJF99_RS13510 PF01380 SIS domain LJF99_RS13515 PF08220 DeoR-like helix-turn-helix domain LJF99_RS13515 PF00455 DeoR C terminal sensor domain LJF99_RS13520 PF00486 Transcriptional regulatory protein, C terminal LJF99_RS13520 PF00072 Response regulator receiver domain LJF99_RS13525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS13525 PF00672 HAMP domain LJF99_RS13525 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS13535 PF06123 Inner membrane protein CreD LJF99_RS13540 PF00132 Bacterial transferase hexapeptide (six repeats) LJF99_RS13540 PF14602 Hexapeptide repeat of succinyl-transferase LJF99_RS13540 PF12804 MobA-like NTP transferase domain LJF99_RS13545 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LJF99_RS13545 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LJF99_RS13550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LJF99_RS13550 PF02874 ATP synthase alpha/beta family, beta-barrel domain LJF99_RS13555 PF00231 ATP synthase LJF99_RS13560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LJF99_RS13560 PF00306 ATP synthase alpha/beta chain, C terminal domain LJF99_RS13560 PF02874 ATP synthase alpha/beta family, beta-barrel domain LJF99_RS13565 PF00213 ATP synthase delta (OSCP) subunit LJF99_RS13570 PF00430 ATP synthase B/B' CF(0) LJF99_RS13575 PF00137 ATP synthase subunit C LJF99_RS13580 PF00119 ATP synthase A chain LJF99_RS13585 PF03899 ATP synthase I chain LJF99_RS13590 PF02195 ParB-like nuclease domain LJF99_RS13590 PF17762 HTH domain found in ParB protein LJF99_RS13595 PF13614 AAA domain LJF99_RS13600 PF02527 rRNA small subunit methyltransferase G LJF99_RS13605 PF01134 Glucose inhibited division protein A LJF99_RS13605 PF13932 GidA associated domain LJF99_RS13610 PF00258 Flavodoxin LJF99_RS13615 PF07715 TonB-dependent Receptor Plug Domain LJF99_RS13615 PF00593 TonB dependent receptor LJF99_RS13620 PF00005 ABC transporter LJF99_RS13625 PF00005 ABC transporter LJF99_RS13630 PF01497 Periplasmic binding protein LJF99_RS13635 PF01032 FecCD transport family LJF99_RS13640 PF07715 TonB-dependent Receptor Plug Domain LJF99_RS13640 PF00593 TonB dependent receptor LJF99_RS13645 PF01497 Periplasmic binding protein LJF99_RS13650 PF00005 ABC transporter LJF99_RS13655 PF01032 FecCD transport family LJF99_RS13660 PF01032 FecCD transport family LJF99_RS13665 PF00005 ABC transporter LJF99_RS13670 PF08021 Siderophore-interacting FAD-binding domain LJF99_RS13670 PF04954 Siderophore-interacting protein LJF99_RS13670 PF00005 ABC transporter LJF99_RS13670 PF00664 ABC transporter transmembrane region LJF99_RS13680 PF13193 AMP-binding enzyme C-terminal domain LJF99_RS13680 PF00550 Phosphopantetheine attachment site LJF99_RS13680 PF00668 Condensation domain LJF99_RS13680 PF00975 Thioesterase domain LJF99_RS13680 PF00501 AMP-binding enzyme LJF99_RS13685 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LJF99_RS13690 PF00501 AMP-binding enzyme LJF99_RS13690 PF00668 Condensation domain LJF99_RS13690 PF00550 Phosphopantetheine attachment site LJF99_RS13700 PF00282 Pyridoxal-dependent decarboxylase conserved domain LJF99_RS13705 PF01926 50S ribosome-binding GTPase LJF99_RS13705 PF12631 MnmE helical domain LJF99_RS13705 PF10396 GTP-binding protein TrmE N-terminus LJF99_RS13710 PF02096 60Kd inner membrane protein LJF99_RS13710 PF14849 YidC periplasmic domain LJF99_RS13715 PF01809 Putative membrane protein insertion efficiency factor LJF99_RS13720 PF00825 Ribonuclease P LJF99_RS13725 PF00468 Ribosomal protein L34 LJF99_RS13730 PF00005 ABC transporter LJF99_RS13735 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS13740 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJF99_RS13745 PF00308 Bacterial dnaA protein LJF99_RS13745 PF08299 Bacterial dnaA protein helix-turn-helix LJF99_RS13745 PF11638 DnaA N-terminal domain LJF99_RS13750 PF00712 DNA polymerase III beta subunit, N-terminal domain LJF99_RS13750 PF02767 DNA polymerase III beta subunit, central domain LJF99_RS13750 PF02768 DNA polymerase III beta subunit, C-terminal domain LJF99_RS13755 PF02463 RecF/RecN/SMC N terminal domain LJF99_RS13760 PF01751 Toprim domain LJF99_RS13760 PF18053 DNA gyrase B subunit insert domain LJF99_RS13760 PF00986 DNA gyrase B subunit, carboxyl terminus LJF99_RS13760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS13760 PF00204 DNA gyrase B LJF99_RS13775 PF08279 HTH domain LJF99_RS13775 PF13280 WYL domain LJF99_RS13780 PF00011 Hsp20/alpha crystallin family LJF99_RS13785 PF00011 Hsp20/alpha crystallin family LJF99_RS13805 PF00155 Aminotransferase class I and II LJF99_RS13830 PF00072 Response regulator receiver domain LJF99_RS13830 PF00486 Transcriptional regulatory protein, C terminal LJF99_RS13835 PF02702 Osmosensitive K+ channel His kinase sensor domain LJF99_RS13835 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS13835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS13835 PF13493 Domain of unknown function (DUF4118) LJF99_RS13835 PF13492 GAF domain LJF99_RS13840 PF02669 K+-transporting ATPase, c chain LJF99_RS13850 PF03814 Potassium-transporting ATPase A subunit LJF99_RS13855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LJF99_RS13855 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJF99_RS13860 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS13860 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJF99_RS13860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS13865 PF00873 AcrB/AcrD/AcrF family LJF99_RS13870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LJF99_RS13875 PF00440 Bacterial regulatory proteins, tetR family LJF99_RS13910 PF12146 Serine aminopeptidase, S33 LJF99_RS13915 PF12105 SpoU, rRNA methylase, C-terminal LJF99_RS13915 PF00588 SpoU rRNA Methylase family LJF99_RS13920 PF13291 ACT domain LJF99_RS13920 PF04607 Region found in RelA / SpoT proteins LJF99_RS13920 PF02824 TGS domain LJF99_RS13925 PF01192 RNA polymerase Rpb6 LJF99_RS13930 PF00625 Guanylate kinase LJF99_RS13935 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LJF99_RS13950 PF00892 EamA-like transporter family LJF99_RS13970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS13970 PF03466 LysR substrate binding domain LJF99_RS13975 PF00579 tRNA synthetases class I (W and Y) LJF99_RS13980 PF00582 Universal stress protein family LJF99_RS13985 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LJF99_RS13985 PF07055 Enoyl reductase FAD binding domain LJF99_RS13985 PF12241 Trans-2-enoyl-CoA reductase catalytic region LJF99_RS13990 PF08448 PAS fold LJF99_RS13990 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS14000 PF00210 Ferritin-like domain LJF99_RS14010 PF01810 LysE type translocator LJF99_RS14035 PF16967 E-set like domain LJF99_RS14035 PF15976 CS1-pili formation C-terminal LJF99_RS14055 PF00665 Integrase core domain LJF99_RS14060 PF01695 IstB-like ATP binding protein LJF99_RS14065 PF18649 EcpB C-terminal domain LJF99_RS14070 PF16449 Fimbrillin MatB LJF99_RS14075 PF00072 Response regulator receiver domain LJF99_RS14075 PF00196 Bacterial regulatory proteins, luxR family LJF99_RS14080 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS14080 PF01627 Hpt domain LJF99_RS14080 PF00989 PAS fold LJF99_RS14080 PF00072 Response regulator receiver domain LJF99_RS14080 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJF99_RS14080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS14090 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS14090 PF01627 Hpt domain LJF99_RS14090 PF00989 PAS fold LJF99_RS14090 PF00072 Response regulator receiver domain LJF99_RS14090 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJF99_RS14090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS14100 PF07694 5TMR of 5TMR-LYT LJF99_RS14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS14100 PF06580 Histidine kinase LJF99_RS14105 PF04397 LytTr DNA-binding domain LJF99_RS14105 PF00072 Response regulator receiver domain LJF99_RS14110 PF07690 Major Facilitator Superfamily LJF99_RS14115 PF02222 ATP-grasp domain LJF99_RS14115 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LJF99_RS14120 PF00731 AIR carboxylase LJF99_RS14135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS14135 PF03466 LysR substrate binding domain LJF99_RS14140 PF00593 TonB dependent receptor LJF99_RS14140 PF07715 TonB-dependent Receptor Plug Domain LJF99_RS14145 PF01177 Asp/Glu/Hydantoin racemase LJF99_RS14175 PF13607 Succinyl-CoA ligase like flavodoxin domain LJF99_RS14175 PF13380 CoA binding domain LJF99_RS14175 PF00583 Acetyltransferase (GNAT) family LJF99_RS14190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS14190 PF03466 LysR substrate binding domain LJF99_RS14195 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LJF99_RS14195 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LJF99_RS14200 PF00342 Phosphoglucose isomerase LJF99_RS14210 PF00924 Mechanosensitive ion channel LJF99_RS14210 PF05552 Conserved TM helix LJF99_RS14215 PF00440 Bacterial regulatory proteins, tetR family LJF99_RS14220 PF00692 dUTPase LJF99_RS14225 PF04127 DNA / pantothenate metabolism flavoprotein LJF99_RS14225 PF02441 Flavoprotein LJF99_RS14230 PF04002 RadC-like JAB domain LJF99_RS14235 PF00830 Ribosomal L28 family LJF99_RS14240 PF00471 Ribosomal protein L33 LJF99_RS14250 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LJF99_RS14250 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LJF99_RS14250 PF06827 Zinc finger found in FPG and IleRS LJF99_RS14255 PF04393 Protein of unknown function (DUF535) LJF99_RS14260 PF01467 Cytidylyltransferase-like LJF99_RS14265 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LJF99_RS14270 PF00535 Glycosyl transferase family 2 LJF99_RS14275 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LJF99_RS14280 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LJF99_RS14285 PF03611 PTS system sugar-specific permease component LJF99_RS14295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LJF99_RS14300 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LJF99_RS14300 PF00356 Bacterial regulatory proteins, lacI family LJF99_RS14320 PF03748 Flagellar basal body-associated protein FliL LJF99_RS14325 PF04345 Chorismate lyase LJF99_RS14330 PF01040 UbiA prenyltransferase family LJF99_RS14335 PF01553 Acyltransferase LJF99_RS14340 PF00717 Peptidase S24-like LJF99_RS14340 PF01726 LexA DNA binding domain LJF99_RS14350 PF02630 SCO1/SenC LJF99_RS14360 PF00588 SpoU rRNA Methylase family LJF99_RS14365 PF16527 Two-component sensor protein CpxA, periplasmic domain LJF99_RS14365 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS14365 PF00672 HAMP domain LJF99_RS14365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS14370 PF00486 Transcriptional regulatory protein, C terminal LJF99_RS14370 PF00072 Response regulator receiver domain LJF99_RS14375 PF01545 Cation efflux family LJF99_RS14375 PF16916 Dimerisation domain of Zinc Transporter LJF99_RS14380 PF00132 Bacterial transferase hexapeptide (six repeats) LJF99_RS14380 PF06426 Serine acetyltransferase, N-terminal LJF99_RS14390 PF06005 Cell division protein ZapB LJF99_RS14400 PF01612 3'-5' exonuclease LJF99_RS14400 PF01367 5'-3' exonuclease, C-terminal SAM fold LJF99_RS14400 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LJF99_RS14400 PF00476 DNA polymerase family A LJF99_RS14405 PF00132 Bacterial transferase hexapeptide (six repeats) LJF99_RS14455 PF13593 SBF-like CPA transporter family (DUF4137) LJF99_RS14460 PF12867 DinB superfamily LJF99_RS14460 PF03781 Sulfatase-modifying factor enzyme 1 LJF99_RS14470 PF00756 Putative esterase LJF99_RS14475 PF08240 Alcohol dehydrogenase GroES-like domain LJF99_RS14475 PF00107 Zinc-binding dehydrogenase LJF99_RS14480 PF03466 LysR substrate binding domain LJF99_RS14480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS14485 PF02653 Branched-chain amino acid transport system / permease component LJF99_RS14490 PF02653 Branched-chain amino acid transport system / permease component LJF99_RS14495 PF00005 ABC transporter LJF99_RS14505 PF02608 ABC transporter substrate-binding protein PnrA-like LJF99_RS14510 PF00580 UvrD/REP helicase N-terminal domain LJF99_RS14510 PF13361 UvrD-like helicase C-terminal domain LJF99_RS14550 PF04972 BON domain LJF99_RS14570 PF03466 LysR substrate binding domain LJF99_RS14570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS14575 PF01810 LysE type translocator LJF99_RS14580 PF04143 Sulphur transport LJF99_RS14585 PF00689 Cation transporting ATPase, C-terminus LJF99_RS14585 PF00690 Cation transporter/ATPase, N-terminus LJF99_RS14590 PF01810 LysE type translocator LJF99_RS14595 PF12833 Helix-turn-helix domain LJF99_RS14600 PF00892 EamA-like transporter family LJF99_RS14610 PF00171 Aldehyde dehydrogenase family LJF99_RS14615 PF01381 Helix-turn-helix LJF99_RS14620 PF00202 Aminotransferase class-III LJF99_RS14625 PF00171 Aldehyde dehydrogenase family LJF99_RS14630 PF00958 GMP synthase C terminal domain LJF99_RS14630 PF00117 Glutamine amidotransferase class-I LJF99_RS14630 PF02540 NAD synthase LJF99_RS14635 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LJF99_RS14635 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LJF99_RS14640 PF00294 pfkB family carbohydrate kinase LJF99_RS14645 PF02082 Transcriptional regulator LJF99_RS14660 PF02646 RmuC family LJF99_RS14665 PF02386 Cation transport protein LJF99_RS14670 PF02080 TrkA-C domain LJF99_RS14670 PF02254 TrkA-N domain LJF99_RS14675 PF01189 16S rRNA methyltransferase RsmB/F LJF99_RS14675 PF01029 NusB family LJF99_RS14680 PF02911 Formyl transferase, C-terminal domain LJF99_RS14680 PF00551 Formyl transferase LJF99_RS14685 PF01327 Polypeptide deformylase LJF99_RS14690 PF01476 LysM domain LJF99_RS14695 PF17782 DprA winged helix domain LJF99_RS14695 PF02481 DNA recombination-mediator protein A LJF99_RS14700 PF04361 Protein of unknown function (DUF494) LJF99_RS14705 PF01396 Topoisomerase DNA binding C4 zinc finger LJF99_RS14710 PF00731 AIR carboxylase LJF99_RS14715 PF01300 Telomere recombination LJF99_RS14720 PF01218 Coproporphyrinogen III oxidase LJF99_RS14725 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LJF99_RS14725 PF01488 Shikimate / quinate 5-dehydrogenase LJF99_RS14725 PF08501 Shikimate dehydrogenase substrate binding domain LJF99_RS14730 PF07369 Protein of unknown function (DUF1488) LJF99_RS14735 PF01926 50S ribosome-binding GTPase LJF99_RS14740 PF00034 Cytochrome c LJF99_RS14745 PF04220 Der GTPase activator (YihI) LJF99_RS14750 PF10675 Protein of unknown function (DUF2489) LJF99_RS14755 PF04055 Radical SAM superfamily LJF99_RS14755 PF06969 HemN C-terminal domain LJF99_RS14760 PF00962 Adenosine/AMP deaminase LJF99_RS14765 PF00158 Sigma-54 interaction domain LJF99_RS14765 PF00072 Response regulator receiver domain LJF99_RS14765 PF02954 Bacterial regulatory protein, Fis family LJF99_RS14770 PF00989 PAS fold LJF99_RS14770 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS14770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS14780 PF00120 Glutamine synthetase, catalytic domain LJF99_RS14780 PF03951 Glutamine synthetase, beta-Grasp domain LJF99_RS14785 PF00009 Elongation factor Tu GTP binding domain LJF99_RS14785 PF00679 Elongation factor G C-terminus LJF99_RS14785 PF03144 Elongation factor Tu domain 2 LJF99_RS14790 PF03631 Virulence factor BrkB LJF99_RS14805 PF09500 Putative thioesterase (yiiD_Cterm) LJF99_RS14805 PF00583 Acetyltransferase (GNAT) family LJF99_RS14815 PF00271 Helicase conserved C-terminal domain LJF99_RS14815 PF00270 DEAD/DEAH box helicase LJF99_RS14815 PF17191 RecG wedge domain LJF99_RS14820 PF13091 PLD-like domain LJF99_RS14825 PF02447 GntP family permease LJF99_RS14830 PF01202 Shikimate kinase LJF99_RS14835 PF00920 Dehydratase family LJF99_RS14840 PF01081 KDPG and KHG aldolase LJF99_RS14845 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LJF99_RS14845 PF00356 Bacterial regulatory proteins, lacI family LJF99_RS14855 PF01551 Peptidase family M23 LJF99_RS14860 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LJF99_RS14860 PF01676 Metalloenzyme superfamily LJF99_RS14865 PF00581 Rhodanese-like domain LJF99_RS14870 PF02556 Preprotein translocase subunit SecB LJF99_RS14875 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LJF99_RS14875 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LJF99_RS14880 PF01521 Iron-sulphur cluster biosynthesis LJF99_RS14880 PF01106 NifU-like domain LJF99_RS14885 PF00156 Phosphoribosyl transferase domain LJF99_RS14890 PF00561 alpha/beta hydrolase fold LJF99_RS14910 PF17674 HHH domain LJF99_RS14910 PF00575 S1 RNA binding domain LJF99_RS14910 PF09371 Tex-like protein N-terminal domain LJF99_RS14910 PF16921 Tex protein YqgF-like domain LJF99_RS14915 PF01272 Transcription elongation factor, GreA/GreB, C-term LJF99_RS14915 PF03449 Transcription elongation factor, N-terminal LJF99_RS14920 PF00072 Response regulator receiver domain LJF99_RS14920 PF00486 Transcriptional regulatory protein, C terminal LJF99_RS14925 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS14925 PF00672 HAMP domain LJF99_RS14925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS14935 PF00338 Ribosomal protein S10p/S20e LJF99_RS14940 PF00297 Ribosomal protein L3 LJF99_RS14945 PF00573 Ribosomal protein L4/L1 family LJF99_RS14950 PF00276 Ribosomal protein L23 LJF99_RS14955 PF03947 Ribosomal Proteins L2, C-terminal domain LJF99_RS14955 PF00181 Ribosomal Proteins L2, RNA binding domain LJF99_RS14960 PF00203 Ribosomal protein S19 LJF99_RS14965 PF00237 Ribosomal protein L22p/L17e LJF99_RS14970 PF07650 KH domain LJF99_RS14970 PF00189 Ribosomal protein S3, C-terminal domain LJF99_RS14975 PF00252 Ribosomal protein L16p/L10e LJF99_RS14980 PF00831 Ribosomal L29 protein LJF99_RS14985 PF00366 Ribosomal protein S17 LJF99_RS14990 PF00238 Ribosomal protein L14p/L23e LJF99_RS14995 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LJF99_RS15000 PF00281 Ribosomal protein L5 LJF99_RS15000 PF00673 ribosomal L5P family C-terminus LJF99_RS15005 PF00253 Ribosomal protein S14p/S29e LJF99_RS15010 PF00410 Ribosomal protein S8 LJF99_RS15015 PF00347 Ribosomal protein L6 LJF99_RS15020 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LJF99_RS15025 PF00333 Ribosomal protein S5, N-terminal domain LJF99_RS15025 PF03719 Ribosomal protein S5, C-terminal domain LJF99_RS15030 PF00327 Ribosomal protein L30p/L7e LJF99_RS15035 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LJF99_RS15040 PF00344 SecY translocase LJF99_RS15045 PF00444 Ribosomal protein L36 LJF99_RS15050 PF00416 Ribosomal protein S13/S18 LJF99_RS15055 PF00411 Ribosomal protein S11 LJF99_RS15060 PF00163 Ribosomal protein S4/S9 N-terminal domain LJF99_RS15060 PF01479 S4 domain LJF99_RS15065 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LJF99_RS15065 PF01000 RNA polymerase Rpb3/RpoA insert domain LJF99_RS15065 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LJF99_RS15070 PF01196 Ribosomal protein L17 LJF99_RS15120 PF01695 IstB-like ATP binding protein LJF99_RS15125 PF00665 Integrase core domain LJF99_RS15135 PF02733 Dak1 domain LJF99_RS15140 PF02734 DAK2 domain LJF99_RS15145 PF05524 PEP-utilising enzyme, N-terminal LJF99_RS15145 PF03610 PTS system fructose IIA component LJF99_RS15145 PF00391 PEP-utilising enzyme, mobile domain LJF99_RS15145 PF00381 PTS HPr component phosphorylation site LJF99_RS15150 PF00465 Iron-containing alcohol dehydrogenase LJF99_RS15155 PF00158 Sigma-54 interaction domain LJF99_RS15155 PF02954 Bacterial regulatory protein, Fis family LJF99_RS15155 PF00989 PAS fold LJF99_RS15160 PF01594 AI-2E family transporter LJF99_RS15165 PF00293 NUDIX domain LJF99_RS15190 PF00199 Catalase LJF99_RS15190 PF06628 Catalase-related immune-responsive LJF99_RS15215 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS15225 PF08402 TOBE domain LJF99_RS15225 PF00005 ABC transporter LJF99_RS15235 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS15250 PF07702 UTRA domain LJF99_RS15250 PF00392 Bacterial regulatory proteins, gntR family LJF99_RS15270 PF02678 Pirin LJF99_RS15270 PF17954 Quercetinase C-terminal cupin domain LJF99_RS15275 PF07681 DoxX LJF99_RS15280 PF17946 RecC C-terminal domain LJF99_RS15285 PF13361 UvrD-like helicase C-terminal domain LJF99_RS15285 PF12705 PD-(D/E)XK nuclease superfamily LJF99_RS15285 PF00580 UvrD/REP helicase N-terminal domain LJF99_RS15290 PF13538 UvrD-like helicase C-terminal domain LJF99_RS15300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LJF99_RS15315 PF00909 Ammonium Transporter Family LJF99_RS15320 PF00543 Nitrogen regulatory protein P-II LJF99_RS15325 PF00072 Response regulator receiver domain LJF99_RS15325 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS15335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS15335 PF00672 HAMP domain LJF99_RS15335 PF02743 Cache domain LJF99_RS15355 PF00486 Transcriptional regulatory protein, C terminal LJF99_RS15355 PF00072 Response regulator receiver domain LJF99_RS15360 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS15360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS15360 PF00672 HAMP domain LJF99_RS15365 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS15375 PF00313 'Cold-shock' DNA-binding domain LJF99_RS15380 PF08448 PAS fold LJF99_RS15380 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS15385 PF00005 ABC transporter LJF99_RS15385 PF17755 UvrA DNA-binding domain LJF99_RS15385 PF17760 UvrA interaction domain LJF99_RS15390 PF00196 Bacterial regulatory proteins, luxR family LJF99_RS15395 PF00436 Single-strand binding protein family LJF99_RS15405 PF16916 Dimerisation domain of Zinc Transporter LJF99_RS15405 PF01545 Cation efflux family LJF99_RS15435 PF00999 Sodium/hydrogen exchanger family LJF99_RS15435 PF02254 TrkA-N domain LJF99_RS15440 PF02525 Flavodoxin-like fold LJF99_RS15455 PF00326 Prolyl oligopeptidase family LJF99_RS15455 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LJF99_RS15475 PF07947 YhhN family LJF99_RS15480 PF07690 Major Facilitator Superfamily LJF99_RS15485 PF13533 Biotin-lipoyl like LJF99_RS15500 PF00375 Sodium:dicarboxylate symporter family LJF99_RS15505 PF10678 Protein of unknown function (DUF2492) LJF99_RS15510 PF01914 MarC family integral membrane protein LJF99_RS15515 PF03466 LysR substrate binding domain LJF99_RS15515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS15520 PF02416 mttA/Hcf106 family LJF99_RS15530 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJF99_RS15530 PF01464 Transglycosylase SLT domain LJF99_RS15540 PF13091 PLD-like domain LJF99_RS15550 PF00440 Bacterial regulatory proteins, tetR family LJF99_RS15570 PF00448 SRP54-type protein, GTPase domain LJF99_RS15570 PF02881 SRP54-type protein, helical bundle domain LJF99_RS15575 PF00005 ABC transporter LJF99_RS15580 PF18075 FtsX extracellular domain LJF99_RS15585 PF00140 Sigma-70 factor, region 1.2 LJF99_RS15585 PF04542 Sigma-70 region 2 LJF99_RS15585 PF04545 Sigma-70, region 4 LJF99_RS15590 PF00484 Carbonic anhydrase LJF99_RS15595 PF07702 UTRA domain LJF99_RS15595 PF00392 Bacterial regulatory proteins, gntR family LJF99_RS15600 PF01979 Amidohydrolase family LJF99_RS15605 PF00491 Arginase family LJF99_RS15610 PF01175 Urocanase Rossmann-like domain LJF99_RS15610 PF17392 Urocanase C-terminal domain LJF99_RS15610 PF17391 Urocanase N-terminal domain LJF99_RS15615 PF00221 Aromatic amino acid lyase LJF99_RS15620 PF01699 Sodium/calcium exchanger protein LJF99_RS15630 PF00563 EAL domain LJF99_RS15630 PF17157 Gammaproteobacterial periplasmic sensor domain LJF99_RS15630 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS15660 PF00263 Bacterial type II and III secretion system protein LJF99_RS15660 PF03958 Bacterial type II/III secretion system short domain LJF99_RS15695 PF04085 rod shape-determining protein MreC LJF99_RS15700 PF04093 rod shape-determining protein MreD LJF99_RS15705 PF02545 Maf-like protein LJF99_RS15710 PF00575 S1 RNA binding domain LJF99_RS15710 PF10150 Ribonuclease E/G family LJF99_RS15715 PF13502 AsmA-like C-terminal region LJF99_RS15715 PF13116 Protein of unknown function LJF99_RS15725 PF00795 Carbon-nitrogen hydrolase LJF99_RS15730 PF01523 Putative modulator of DNA gyrase LJF99_RS15740 PF01914 MarC family integral membrane protein LJF99_RS15755 PF00072 Response regulator receiver domain LJF99_RS15760 PF00672 HAMP domain LJF99_RS15760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS15760 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS15760 PF01627 Hpt domain LJF99_RS15760 PF00072 Response regulator receiver domain LJF99_RS15760 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LJF99_RS15765 PF13581 Histidine kinase-like ATPase domain LJF99_RS15770 PF08678 Rsbr N terminal LJF99_RS15770 PF01740 STAS domain LJF99_RS15775 PF13426 PAS domain LJF99_RS15775 PF08447 PAS fold LJF99_RS15775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS15780 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LJF99_RS15790 PF08668 HDOD domain LJF99_RS15805 PF00999 Sodium/hydrogen exchanger family LJF99_RS15810 PF02310 B12 binding domain LJF99_RS15810 PF02607 B12 binding domain LJF99_RS15810 PF02965 Vitamin B12 dependent methionine synthase, activation domain LJF99_RS15810 PF00809 Pterin binding enzyme LJF99_RS15810 PF02574 Homocysteine S-methyltransferase LJF99_RS15815 PF08443 RimK-like ATP-grasp domain LJF99_RS15815 PF18030 RimK PreATP-grasp domain LJF99_RS15820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS15825 PF00072 Response regulator receiver domain LJF99_RS15825 PF00486 Transcriptional regulatory protein, C terminal LJF99_RS15840 PF03440 Aerolysin/Pertussis toxin (APT) domain LJF99_RS15840 PF01117 Aerolysin toxin LJF99_RS15845 PF13667 ThiC-associated domain LJF99_RS15845 PF01964 Radical SAM ThiC family LJF99_RS15850 PF02581 Thiamine monophosphate synthase LJF99_RS15855 PF00899 ThiF family LJF99_RS15865 PF05690 Thiazole biosynthesis protein ThiG LJF99_RS15870 PF06968 Biotin and Thiamin Synthesis associated domain LJF99_RS15870 PF04055 Radical SAM superfamily LJF99_RS15895 PF00132 Bacterial transferase hexapeptide (six repeats) LJF99_RS15900 PF13036 Peptidoglycan-synthase activator LpoB LJF99_RS15920 PF06055 Exopolysaccharide synthesis, ExoD LJF99_RS15930 PF08803 Putative mono-oxygenase ydhR LJF99_RS15935 PF01638 HxlR-like helix-turn-helix LJF99_RS15960 PF07715 TonB-dependent Receptor Plug Domain LJF99_RS15960 PF00593 TonB dependent receptor LJF99_RS15975 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LJF99_RS15990 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LJF99_RS15995 PF02602 Uroporphyrinogen-III synthase HemD LJF99_RS16000 PF03900 Porphobilinogen deaminase, C-terminal domain LJF99_RS16000 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LJF99_RS16005 PF12633 Adenylate cyclase NT domain LJF99_RS16005 PF01295 Adenylate cyclase, class-I LJF99_RS16015 PF13592 Winged helix-turn helix LJF99_RS16015 PF13358 DDE superfamily endonuclease LJF99_RS16025 PF01491 Frataxin-like domain LJF99_RS16035 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LJF99_RS16035 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LJF99_RS16040 PF01678 Diaminopimelate epimerase LJF99_RS16050 PF00589 Phage integrase family LJF99_RS16050 PF02899 Phage integrase, N-terminal SAM-like domain LJF99_RS16055 PF13419 Haloacid dehalogenase-like hydrolase LJF99_RS16065 PF00924 Mechanosensitive ion channel LJF99_RS16075 PF07722 Peptidase C26 LJF99_RS16095 PF00005 ABC transporter LJF99_RS16105 PF02464 Competence-damaged protein LJF99_RS16105 PF00994 Probable molybdopterin binding domain LJF99_RS16110 PF01966 HD domain LJF99_RS16110 PF00013 KH domain LJF99_RS16110 PF12072 Domain of unknown function (DUF3552) LJF99_RS16115 PF04204 Homoserine O-succinyltransferase LJF99_RS16125 PF01037 Lrp/AsnC ligand binding domain LJF99_RS16130 PF00884 Sulfatase LJF99_RS16145 PF02903 Alpha amylase, N-terminal ig-like domain LJF99_RS16145 PF00128 Alpha amylase, catalytic domain LJF99_RS16145 PF16657 Maltogenic Amylase, C-terminal domain LJF99_RS16150 PF02308 MgtC family LJF99_RS16170 PF00106 short chain dehydrogenase LJF99_RS16175 PF03577 Peptidase family C69 LJF99_RS16190 PF00465 Iron-containing alcohol dehydrogenase LJF99_RS16200 PF01053 Cys/Met metabolism PLP-dependent enzyme LJF99_RS16210 PF12793 Sugar transport-related sRNA regulator N-term LJF99_RS16210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LJF99_RS16215 PF00141 Peroxidase LJF99_RS16230 PF03280 Proteobacterial lipase chaperone protein LJF99_RS16235 PF00561 alpha/beta hydrolase fold LJF99_RS16245 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LJF99_RS16245 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LJF99_RS16250 PF02698 DUF218 domain LJF99_RS16255 PF01752 Collagenase LJF99_RS16255 PF08453 Peptidase family M9 N-terminal LJF99_RS16265 PF00419 Fimbrial protein LJF99_RS16275 PF00577 Outer membrane usher protein LJF99_RS16275 PF13953 PapC C-terminal domain LJF99_RS16275 PF13954 PapC N-terminal domain LJF99_RS16280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LJF99_RS16280 PF02753 Pili assembly chaperone PapD, C-terminal domain LJF99_RS16285 PF00419 Fimbrial protein LJF99_RS16290 PF00419 Fimbrial protein LJF99_RS16300 PF00072 Response regulator receiver domain LJF99_RS16300 PF00486 Transcriptional regulatory protein, C terminal LJF99_RS16305 PF00501 AMP-binding enzyme LJF99_RS16310 PF13378 Enolase C-terminal domain-like LJF99_RS16315 PF00378 Enoyl-CoA hydratase/isomerase LJF99_RS16320 PF12697 Alpha/beta hydrolase family LJF99_RS16325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LJF99_RS16325 PF16582 Middle domain of thiamine pyrophosphate LJF99_RS16325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LJF99_RS16330 PF00425 chorismate binding enzyme LJF99_RS16335 PF01040 UbiA prenyltransferase family LJF99_RS16365 PF03880 DbpA RNA binding domain LJF99_RS16365 PF00270 DEAD/DEAH box helicase LJF99_RS16365 PF00271 Helicase conserved C-terminal domain LJF99_RS16370 PF07670 Nucleoside recognition LJF99_RS16370 PF07662 Na+ dependent nucleoside transporter C-terminus LJF99_RS16370 PF01773 Na+ dependent nucleoside transporter N-terminus LJF99_RS16375 PF04307 LexA-binding, inner membrane-associated putative hydrolase LJF99_RS16390 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LJF99_RS16395 PF01544 CorA-like Mg2+ transporter protein LJF99_RS16410 PF00684 DnaJ central domain LJF99_RS16410 PF00226 DnaJ domain LJF99_RS16410 PF01556 DnaJ C terminal domain LJF99_RS16415 PF03471 Transporter associated domain LJF99_RS16415 PF00999 Sodium/hydrogen exchanger family LJF99_RS16415 PF02080 TrkA-C domain LJF99_RS16420 PF05068 Mannitol repressor LJF99_RS16425 PF01232 Mannitol dehydrogenase Rossmann domain LJF99_RS16425 PF08125 Mannitol dehydrogenase C-terminal domain LJF99_RS16430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LJF99_RS16430 PF02378 Phosphotransferase system, EIIC LJF99_RS16430 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LJF99_RS16445 PF17876 Cold shock domain LJF99_RS16445 PF00773 RNB domain LJF99_RS16445 PF08206 Ribonuclease B OB domain LJF99_RS16450 PF03466 LysR substrate binding domain LJF99_RS16450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS16455 PF00765 Autoinducer synthase LJF99_RS16460 PF00196 Bacterial regulatory proteins, luxR family LJF99_RS16460 PF03472 Autoinducer binding domain LJF99_RS16465 PF01810 LysE type translocator LJF99_RS16470 PF02872 5'-nucleotidase, C-terminal domain LJF99_RS16470 PF00149 Calcineurin-like phosphoesterase LJF99_RS16475 PF05433 Glycine zipper 2TM domain LJF99_RS16480 PF00583 Acetyltransferase (GNAT) family LJF99_RS16485 PF11756 Nitrous oxide-stimulated promoter LJF99_RS16490 PF00557 Metallopeptidase family M24 LJF99_RS16490 PF01321 Creatinase/Prolidase N-terminal domain LJF99_RS16495 PF00392 Bacterial regulatory proteins, gntR family LJF99_RS16500 PF01293 Phosphoenolpyruvate carboxykinase LJF99_RS16505 PF01430 Hsp33 protein LJF99_RS16510 PF01479 S4 domain LJF99_RS16515 PF11356 Type II secretion system protein C LJF99_RS16520 PF00263 Bacterial type II and III secretion system protein LJF99_RS16520 PF03958 Bacterial type II/III secretion system short domain LJF99_RS16525 PF00437 Type II/IV secretion system protein LJF99_RS16530 PF00482 Type II secretion system (T2SS), protein F LJF99_RS16535 PF07963 Prokaryotic N-terminal methylation motif LJF99_RS16535 PF08334 Type II secretion system (T2SS), protein G LJF99_RS16540 PF07963 Prokaryotic N-terminal methylation motif LJF99_RS16540 PF12019 Type II transport protein GspH LJF99_RS16545 PF07963 Prokaryotic N-terminal methylation motif LJF99_RS16545 PF02501 Type II secretion system (T2SS), protein I LJF99_RS16550 PF07963 Prokaryotic N-terminal methylation motif LJF99_RS16550 PF11612 Type II secretion system (T2SS), protein J LJF99_RS16555 PF03934 Type II secretion system (T2SS), protein K LJF99_RS16560 PF12693 GspL periplasmic domain LJF99_RS16560 PF05134 Type II secretion system (T2SS), protein L LJF99_RS16565 PF04612 Type II secretion system (T2SS), protein M LJF99_RS16570 PF01203 Type II secretion system (T2SS), protein N LJF99_RS16575 PF00196 Bacterial regulatory proteins, luxR family LJF99_RS16580 PF01479 S4 domain LJF99_RS16580 PF00579 tRNA synthetases class I (W and Y) LJF99_RS16585 PF13419 Haloacid dehalogenase-like hydrolase LJF99_RS16590 PF00293 NUDIX domain LJF99_RS16595 PF00459 Inositol monophosphatase family LJF99_RS16600 PF03222 Tryptophan/tyrosine permease family LJF99_RS16605 PF01588 Putative tRNA binding domain LJF99_RS16610 PF02311 AraC-like ligand binding domain LJF99_RS16610 PF12833 Helix-turn-helix domain LJF99_RS16615 PF01340 Met Apo-repressor, MetJ LJF99_RS16620 PF01053 Cys/Met metabolism PLP-dependent enzyme LJF99_RS16625 PF00696 Amino acid kinase family LJF99_RS16625 PF00742 Homoserine dehydrogenase LJF99_RS16625 PF03447 Homoserine dehydrogenase, NAD binding domain LJF99_RS16640 PF04172 LrgB-like family LJF99_RS16645 PF03788 LrgA family LJF99_RS16660 PF00392 Bacterial regulatory proteins, gntR family LJF99_RS16660 PF00155 Aminotransferase class I and II LJF99_RS16680 PF04073 Aminoacyl-tRNA editing domain LJF99_RS16685 PF02464 Competence-damaged protein LJF99_RS16690 PF00154 recA bacterial DNA recombination protein LJF99_RS16695 PF02631 RecX family LJF99_RS16700 PF02272 DHHA1 domain LJF99_RS16700 PF01411 tRNA synthetases class II (A) LJF99_RS16700 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LJF99_RS16705 PF13840 ACT domain LJF99_RS16705 PF00696 Amino acid kinase family LJF99_RS16705 PF01842 ACT domain LJF99_RS16710 PF02599 Global regulator protein family LJF99_RS16735 PF00768 D-alanyl-D-alanine carboxypeptidase LJF99_RS16740 PF09335 SNARE associated Golgi protein LJF99_RS16745 PF03471 Transporter associated domain LJF99_RS16745 PF00571 CBS domain LJF99_RS16745 PF01595 Cyclin M transmembrane N-terminal domain LJF99_RS16750 PF10458 Valyl tRNA synthetase tRNA binding arm LJF99_RS16750 PF00133 tRNA synthetases class I (I, L, M and V) LJF99_RS16750 PF08264 Anticodon-binding domain of tRNA LJF99_RS16755 PF04364 DNA polymerase III chi subunit, HolC LJF99_RS16760 PF00883 Cytosol aminopeptidase family, catalytic domain LJF99_RS16760 PF02789 Cytosol aminopeptidase family, N-terminal domain LJF99_RS16765 PF03739 Lipopolysaccharide export system permease LptF/LptG LJF99_RS16770 PF03739 Lipopolysaccharide export system permease LptF/LptG LJF99_RS16990 PF06892 Phage regulatory protein CII (CP76) LJF99_RS17000 PF01381 Helix-turn-helix LJF99_RS17000 PF00717 Peptidase S24-like LJF99_RS17005 PF00589 Phage integrase family LJF99_RS17005 PF02899 Phage integrase, N-terminal SAM-like domain LJF99_RS17010 PF13356 Arm DNA-binding domain LJF99_RS17010 PF00589 Phage integrase family LJF99_RS17015 PF13592 Winged helix-turn helix LJF99_RS17015 PF13358 DDE superfamily endonuclease LJF99_RS17020 PF00293 NUDIX domain LJF99_RS17025 PF06853 Protein of unknown function (DUF1249) LJF99_RS17030 PF00149 Calcineurin-like phosphoesterase LJF99_RS17035 PF05728 Uncharacterised protein family (UPF0227) LJF99_RS17040 PF00293 NUDIX domain LJF99_RS17050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS17050 PF01751 Toprim domain LJF99_RS17050 PF00986 DNA gyrase B subunit, carboxyl terminus LJF99_RS17050 PF00204 DNA gyrase B LJF99_RS17055 PF03989 DNA gyrase C-terminal domain, beta-propeller LJF99_RS17055 PF00521 DNA gyrase/topoisomerase IV, subunit A LJF99_RS17090 PF00684 DnaJ central domain LJF99_RS17090 PF01556 DnaJ C terminal domain LJF99_RS17090 PF00226 DnaJ domain LJF99_RS17095 PF07681 DoxX LJF99_RS17100 PF00085 Thioredoxin LJF99_RS17120 PF01553 Acyltransferase LJF99_RS17125 PF04012 PspA/IM30 family LJF99_RS17140 PF01541 GIY-YIG catalytic domain LJF99_RS17150 PF00892 EamA-like transporter family LJF99_RS17155 PF03167 Uracil DNA glycosylase superfamily LJF99_RS17165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS17165 PF03466 LysR substrate binding domain LJF99_RS17170 PF00950 ABC 3 transport family LJF99_RS17175 PF00005 ABC transporter LJF99_RS17180 PF01297 Zinc-uptake complex component A periplasmic LJF99_RS17200 PF01551 Peptidase family M23 LJF99_RS17200 PF01476 LysM domain LJF99_RS17200 PF08525 Opacity-associated protein A N-terminal motif LJF99_RS17205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LJF99_RS17210 PF04222 Protein of unknown function (DUF416) LJF99_RS17225 PF02028 BCCT, betaine/carnitine/choline family transporter LJF99_RS17230 PF01624 MutS domain I LJF99_RS17230 PF05188 MutS domain II LJF99_RS17230 PF05192 MutS domain III LJF99_RS17230 PF05190 MutS family domain IV LJF99_RS17230 PF00488 MutS domain V LJF99_RS17240 PF06953 Arsenical resistance operon trans-acting repressor ArsD LJF99_RS17250 PF01758 Sodium Bile acid symporter family LJF99_RS17255 PF03960 ArsC family LJF99_RS17270 PF00311 Phosphoenolpyruvate carboxylase LJF99_RS17275 PF07687 Peptidase dimerisation domain LJF99_RS17275 PF01546 Peptidase family M20/M25/M40 LJF99_RS17280 PF01118 Semialdehyde dehydrogenase, NAD binding domain LJF99_RS17280 PF02774 Semialdehyde dehydrogenase, dimerisation domain LJF99_RS17285 PF00696 Amino acid kinase family LJF99_RS17290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LJF99_RS17290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LJF99_RS17295 PF00764 Arginosuccinate synthase LJF99_RS17300 PF00206 Lyase LJF99_RS17300 PF14698 Argininosuccinate lyase C-terminal LJF99_RS17305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS17305 PF03466 LysR substrate binding domain LJF99_RS17315 PF14552 Tautomerase enzyme LJF99_RS17345 PF12464 Maltose acetyltransferase LJF99_RS17345 PF14602 Hexapeptide repeat of succinyl-transferase LJF99_RS17350 PF13194 Domain of unknown function (DUF4010) LJF99_RS17365 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS17370 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS17375 PF00005 ABC transporter LJF99_RS17375 PF12857 TOBE-like domain LJF99_RS17380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS17380 PF03466 LysR substrate binding domain LJF99_RS17385 PF00291 Pyridoxal-phosphate dependent enzyme LJF99_RS17390 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS17395 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS17400 PF00005 ABC transporter LJF99_RS17405 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJF99_RS17410 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LJF99_RS17410 PF18416 N-acetylglucosamine binding protein domain 2 LJF99_RS17415 PF17200 Single Cache domain 2 LJF99_RS17415 PF00672 HAMP domain LJF99_RS17415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS17460 PF00535 Glycosyl transferase family 2 LJF99_RS17495 PF11230 Protein of unknown function (DUF3029) LJF99_RS17510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS17510 PF03466 LysR substrate binding domain LJF99_RS17515 PF00155 Aminotransferase class I and II LJF99_RS17520 PF02583 Metal-sensitive transcriptional repressor LJF99_RS17535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LJF99_RS17535 PF11852 Domain of unknown function (DUF3372) LJF99_RS17535 PF03714 Bacterial pullanase-associated domain LJF99_RS17535 PF17967 Pullulanase N2 domain LJF99_RS17535 PF18494 Pullulanase Ins domain LJF99_RS17540 PF00403 Heavy-metal-associated domain LJF99_RS17545 PF08534 Redoxin LJF99_RS17555 PF00270 DEAD/DEAH box helicase LJF99_RS17555 PF00271 Helicase conserved C-terminal domain LJF99_RS17570 PF03372 Endonuclease/Exonuclease/phosphatase family LJF99_RS17575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS17575 PF08447 PAS fold LJF99_RS17590 PF06062 Uncharacterised protein family (UPF0231) LJF99_RS17595 PF17853 GGDEF-like domain LJF99_RS17595 PF13556 PucR C-terminal helix-turn-helix domain LJF99_RS17595 PF05651 Putative sugar diacid recognition LJF99_RS17600 PF02447 GntP family permease LJF99_RS17600 PF02447 GntP family permease LJF99_RS17605 PF02595 Glycerate kinase family LJF99_RS17615 PF00255 Glutathione peroxidase LJF99_RS17620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS17620 PF03466 LysR substrate binding domain LJF99_RS17625 PF01773 Na+ dependent nucleoside transporter N-terminus LJF99_RS17625 PF07670 Nucleoside recognition LJF99_RS17625 PF07662 Na+ dependent nucleoside transporter C-terminus LJF99_RS17630 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LJF99_RS17630 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LJF99_RS17635 PF00472 RF-1 domain LJF99_RS17640 PF00543 Nitrogen regulatory protein P-II LJF99_RS17645 PF13416 Bacterial extracellular solute-binding protein LJF99_RS17655 PF00005 ABC transporter LJF99_RS17655 PF08402 TOBE domain LJF99_RS17660 PF04261 Dyp-type peroxidase family LJF99_RS17665 PF02863 Arginine repressor, C-terminal domain LJF99_RS17665 PF01316 Arginine repressor, DNA binding domain LJF99_RS17670 PF00005 ABC transporter LJF99_RS17675 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJF99_RS17680 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS17685 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS17690 PF00056 lactate/malate dehydrogenase, NAD binding domain LJF99_RS17690 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LJF99_RS17695 PF08238 Sel1 repeat LJF99_RS17700 PF00970 Oxidoreductase FAD-binding domain LJF99_RS17700 PF00042 Globin LJF99_RS17700 PF00175 Oxidoreductase NAD-binding domain LJF99_RS17705 PF02082 Transcriptional regulator LJF99_RS17710 PF01595 Cyclin M transmembrane N-terminal domain LJF99_RS17710 PF03471 Transporter associated domain LJF99_RS17710 PF00571 CBS domain LJF99_RS17715 PF01578 Cytochrome C assembly protein LJF99_RS17720 PF00448 SRP54-type protein, GTPase domain LJF99_RS17720 PF02881 SRP54-type protein, helical bundle domain LJF99_RS17720 PF02978 Signal peptide binding domain LJF99_RS17725 PF00886 Ribosomal protein S16 LJF99_RS17730 PF01782 RimM N-terminal domain LJF99_RS17730 PF05239 PRC-barrel domain LJF99_RS17735 PF01746 tRNA (Guanine-1)-methyltransferase LJF99_RS17740 PF01245 Ribosomal protein L19 LJF99_RS17750 PF02976 DNA mismatch repair enzyme MutH LJF99_RS17755 PF00293 NUDIX domain LJF99_RS17760 PF01590 GAF domain LJF99_RS17760 PF05524 PEP-utilising enzyme, N-terminal LJF99_RS17760 PF00391 PEP-utilising enzyme, mobile domain LJF99_RS17760 PF02896 PEP-utilising enzyme, TIM barrel domain LJF99_RS17765 PF01790 Prolipoprotein diacylglyceryl transferase LJF99_RS17770 PF00303 Thymidylate synthase LJF99_RS17775 PF06965 Na+/H+ antiporter 1 LJF99_RS17785 PF03466 LysR substrate binding domain LJF99_RS17785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS17790 PF01022 Bacterial regulatory protein, arsR family LJF99_RS17795 PF01649 Ribosomal protein S20 LJF99_RS17800 PF03023 Lipid II flippase MurJ LJF99_RS17805 PF01687 Riboflavin kinase LJF99_RS17805 PF06574 FAD synthetase LJF99_RS17810 PF08264 Anticodon-binding domain of tRNA LJF99_RS17810 PF00133 tRNA synthetases class I (I, L, M and V) LJF99_RS17810 PF06827 Zinc finger found in FPG and IleRS LJF99_RS17815 PF01252 Signal peptidase (SPase) II LJF99_RS17820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LJF99_RS17825 PF02401 LytB protein LJF99_RS17830 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor LJF99_RS17830 PF07963 Prokaryotic N-terminal methylation motif LJF99_RS17850 PF05567 Neisseria PilC beta-propeller domain LJF99_RS17865 PF02540 NAD synthase LJF99_RS17865 PF00795 Carbon-nitrogen hydrolase LJF99_RS17870 PF00543 Nitrogen regulatory protein P-II LJF99_RS17880 PF02664 S-Ribosylhomocysteinase (LuxS) LJF99_RS17885 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS17890 PF17876 Cold shock domain LJF99_RS17890 PF08461 Ribonuclease R winged-helix domain LJF99_RS17890 PF08206 Ribonuclease B OB domain LJF99_RS17890 PF00773 RNB domain LJF99_RS17890 PF00575 S1 RNA binding domain LJF99_RS17895 PF00588 SpoU rRNA Methylase family LJF99_RS17895 PF08032 RNA 2'-O ribose methyltransferase substrate binding LJF99_RS17905 PF13673 Acetyltransferase (GNAT) domain LJF99_RS17925 PF01566 Natural resistance-associated macrophage protein LJF99_RS17930 PF01250 Ribosomal protein S6 LJF99_RS17935 PF01084 Ribosomal protein S18 LJF99_RS17940 PF03948 Ribosomal protein L9, C-terminal domain LJF99_RS17940 PF01281 Ribosomal protein L9, N-terminal domain LJF99_RS17945 PF00970 Oxidoreductase FAD-binding domain LJF99_RS17945 PF00175 Oxidoreductase NAD-binding domain LJF99_RS17970 PF08240 Alcohol dehydrogenase GroES-like domain LJF99_RS17970 PF00107 Zinc-binding dehydrogenase LJF99_RS17975 PF09335 SNARE associated Golgi protein LJF99_RS17980 PF05193 Peptidase M16 inactive domain LJF99_RS17980 PF00675 Insulinase (Peptidase family M16) LJF99_RS17985 PF04262 Glutamate-cysteine ligase LJF99_RS17995 PF00501 AMP-binding enzyme LJF99_RS18005 PF00583 Acetyltransferase (GNAT) family LJF99_RS18005 PF13673 Acetyltransferase (GNAT) domain LJF99_RS18015 PF07728 AAA domain (dynein-related subfamily) LJF99_RS18015 PF12592 Protein of unknown function (DUF3763) LJF99_RS18015 PF17868 AAA lid domain LJF99_RS18020 PF05762 VWA domain containing CoxE-like protein LJF99_RS18030 PF01037 Lrp/AsnC ligand binding domain LJF99_RS18040 PF00072 Response regulator receiver domain LJF99_RS18040 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS18045 PF00009 Elongation factor Tu GTP binding domain LJF99_RS18045 PF03144 Elongation factor Tu domain 2 LJF99_RS18045 PF16658 Class II release factor RF3, C-terminal domain LJF99_RS18055 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LJF99_RS18065 PF03129 Anticodon binding domain LJF99_RS18065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LJF99_RS18065 PF04073 Aminoacyl-tRNA editing domain LJF99_RS18070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS18070 PF00672 HAMP domain LJF99_RS18075 PF07499 RuvA, C-terminal domain LJF99_RS18075 PF01330 RuvA N terminal domain LJF99_RS18080 PF17864 RuvB AAA lid domain LJF99_RS18080 PF05491 RuvB C-terminal winged helix domain LJF99_RS18080 PF05496 Holliday junction DNA helicase RuvB P-loop domain LJF99_RS18085 PF01654 Cytochrome bd terminal oxidase subunit I LJF99_RS18090 PF02322 Cytochrome bd terminal oxidase subunit II LJF99_RS18095 PF08173 Membrane bound YbgT-like protein LJF99_RS18100 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) LJF99_RS18105 PF03061 Thioesterase superfamily LJF99_RS18110 PF01618 MotA/TolQ/ExbB proton channel family LJF99_RS18115 PF02472 Biopolymer transport protein ExbD/TolR LJF99_RS18125 PF07676 WD40-like Beta Propeller Repeat LJF99_RS18125 PF04052 TolB amino-terminal domain LJF99_RS18130 PF00691 OmpA family LJF99_RS18135 PF16331 TolA binding protein trimerisation LJF99_RS18135 PF13174 Tetratricopeptide repeat LJF99_RS18215 PF02445 Quinolinate synthetase A protein LJF99_RS18220 PF01263 Aldose 1-epimerase LJF99_RS18225 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LJF99_RS18225 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LJF99_RS18230 PF02446 4-alpha-glucanotransferase LJF99_RS18235 PF00128 Alpha amylase, catalytic domain LJF99_RS18235 PF02806 Alpha amylase, C-terminal all-beta domain LJF99_RS18235 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LJF99_RS18240 PF00128 Alpha amylase, catalytic domain LJF99_RS18240 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LJF99_RS18245 PF01641 SelR domain LJF99_RS18255 PF00027 Cyclic nucleotide-binding domain LJF99_RS18255 PF07885 Ion channel LJF99_RS18260 PF08239 Bacterial SH3 domain LJF99_RS18265 PF14850 DNA-binding domain of Proline dehydrogenase LJF99_RS18265 PF00171 Aldehyde dehydrogenase family LJF99_RS18265 PF01619 Proline dehydrogenase LJF99_RS18265 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LJF99_RS18270 PF09297 NADH pyrophosphatase zinc ribbon domain LJF99_RS18270 PF00293 NUDIX domain LJF99_RS18275 PF01208 Uroporphyrinogen decarboxylase (URO-D) LJF99_RS18280 PF00719 Inorganic pyrophosphatase LJF99_RS18285 PF01225 Mur ligase family, catalytic domain LJF99_RS18285 PF02875 Mur ligase family, glutamate ligase domain LJF99_RS18285 PF08245 Mur ligase middle domain LJF99_RS18290 PF02441 Flavoprotein LJF99_RS18295 PF00440 Bacterial regulatory proteins, tetR family LJF99_RS18300 PF00156 Phosphoribosyl transferase domain LJF99_RS18305 PF00005 ABC transporter LJF99_RS18310 PF01061 ABC-2 type transporter LJF99_RS18320 PF02569 Pantoate-beta-alanine ligase LJF99_RS18325 PF02548 Ketopantoate hydroxymethyltransferase LJF99_RS18330 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LJF99_RS18335 PF12626 Polymerase A arginine-rich C-terminus LJF99_RS18335 PF12627 Probable RNA and SrmB- binding site of polymerase A LJF99_RS18335 PF01743 Poly A polymerase head domain LJF99_RS18340 PF00749 tRNA synthetases class I (E and Q), catalytic domain LJF99_RS18345 PF01258 Prokaryotic dksA/traR C4-type zinc finger LJF99_RS18350 PF03749 Sugar fermentation stimulation protein RE domain LJF99_RS18350 PF17746 SfsA N-terminal OB domain LJF99_RS18360 PF08482 ATP-dependent helicase C-terminal LJF99_RS18360 PF00270 DEAD/DEAH box helicase LJF99_RS18360 PF04408 Helicase associated domain (HA2) LJF99_RS18360 PF00271 Helicase conserved C-terminal domain LJF99_RS18365 PF14814 Bifunctional transglycosylase second domain LJF99_RS18365 PF00912 Transglycosylase LJF99_RS18365 PF00905 Penicillin binding protein transpeptidase domain LJF99_RS18370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LJF99_RS18375 PF00893 Small Multidrug Resistance protein LJF99_RS18380 PF00893 Small Multidrug Resistance protein LJF99_RS18385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS18385 PF03466 LysR substrate binding domain LJF99_RS18390 PF11849 Domain of unknown function (DUF3369) LJF99_RS18400 PF01569 PAP2 superfamily LJF99_RS18415 PF00202 Aminotransferase class-III LJF99_RS18420 PF00654 Voltage gated chloride channel LJF99_RS18430 PF01521 Iron-sulphur cluster biosynthesis LJF99_RS18460 PF01810 LysE type translocator LJF99_RS18465 PF02954 Bacterial regulatory protein, Fis family LJF99_RS18470 PF01207 Dihydrouridine synthase (Dus) LJF99_RS18475 PF02321 Outer membrane efflux protein LJF99_RS18480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LJF99_RS18510 PF00072 Response regulator receiver domain LJF99_RS18515 PF00854 POT family LJF99_RS18520 PF00483 Nucleotidyl transferase LJF99_RS18530 PF00459 Inositol monophosphatase family LJF99_RS18535 PF03795 YCII-related domain LJF99_RS18540 PF04279 Intracellular septation protein A LJF99_RS18545 PF00282 Pyridoxal-dependent decarboxylase conserved domain LJF99_RS18550 PF03006 Haemolysin-III related LJF99_RS18555 PF02080 TrkA-C domain LJF99_RS18555 PF06826 Predicted Permease Membrane Region LJF99_RS18570 PF01584 CheW-like domain LJF99_RS18570 PF00072 Response regulator receiver domain LJF99_RS18575 PF13472 GDSL-like Lipase/Acylhydrolase family LJF99_RS18580 PF00005 ABC transporter LJF99_RS18590 PF08338 Domain of unknown function (DUF1731) LJF99_RS18590 PF01370 NAD dependent epimerase/dehydratase family LJF99_RS18595 PF12792 CSS motif domain associated with EAL LJF99_RS18595 PF00563 EAL domain LJF99_RS18610 PF02390 Putative methyltransferase LJF99_RS18615 PF04320 Protein with unknown function (DUF469) LJF99_RS18620 PF04960 Glutaminase LJF99_RS18625 PF00581 Rhodanese-like domain LJF99_RS18630 PF06004 Bacterial protein of unknown function (DUF903) LJF99_RS18635 PF00005 ABC transporter LJF99_RS18635 PF00664 ABC transporter transmembrane region LJF99_RS18640 PF00561 alpha/beta hydrolase fold LJF99_RS18645 PF00171 Aldehyde dehydrogenase family LJF99_RS18650 PF00732 GMC oxidoreductase LJF99_RS18650 PF05199 GMC oxidoreductase LJF99_RS18655 PF05199 GMC oxidoreductase LJF99_RS18655 PF00732 GMC oxidoreductase LJF99_RS18680 PF05547 Immune inhibitor A peptidase M6 LJF99_RS18680 PF00801 PKD domain LJF99_RS18685 PF06877 Regulator of ribonuclease activity B LJF99_RS18690 PF03707 Bacterial signalling protein N terminal repeat LJF99_RS18690 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS18690 PF00563 EAL domain LJF99_RS18710 PF09905 DNA-binding protein VF530 LJF99_RS18715 PF02666 Phosphatidylserine decarboxylase LJF99_RS18720 PF03193 RsgA GTPase LJF99_RS18725 PF00929 Exonuclease LJF99_RS18755 PF00313 'Cold-shock' DNA-binding domain LJF99_RS18765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS18765 PF00672 HAMP domain LJF99_RS18770 PF00749 tRNA synthetases class I (E and Q), catalytic domain LJF99_RS18800 PF00704 Glycosyl hydrolases family 18 LJF99_RS18800 PF06483 Chitinase C LJF99_RS18815 PF02472 Biopolymer transport protein ExbD/TolR LJF99_RS18820 PF01618 MotA/TolQ/ExbB proton channel family LJF99_RS18825 PF01618 MotA/TolQ/ExbB proton channel family LJF99_RS18835 PF07715 TonB-dependent Receptor Plug Domain LJF99_RS18835 PF00593 TonB dependent receptor LJF99_RS18840 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS18845 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS18850 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS18850 PF12911 N-terminal TM domain of oligopeptide transport permease C LJF99_RS18855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LJF99_RS18860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LJF99_RS18860 PF00005 ABC transporter LJF99_RS18865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LJF99_RS18865 PF00005 ABC transporter LJF99_RS18870 PF07687 Peptidase dimerisation domain LJF99_RS18870 PF01546 Peptidase family M20/M25/M40 LJF99_RS18880 PF00156 Phosphoribosyl transferase domain LJF99_RS18885 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) LJF99_RS18890 PF07417 Sigma factor-binding transcriptional regulator Crl LJF99_RS18895 PF00696 Amino acid kinase family LJF99_RS18895 PF01472 PUA domain LJF99_RS18900 PF00171 Aldehyde dehydrogenase family LJF99_RS18910 PF00582 Universal stress protein family LJF99_RS18930 PF00294 pfkB family carbohydrate kinase LJF99_RS18935 PF04227 Indigoidine synthase A like protein LJF99_RS18940 PF00194 Eukaryotic-type carbonic anhydrase LJF99_RS18945 PF03150 Di-haem cytochrome c peroxidase LJF99_RS18945 PF00034 Cytochrome c LJF99_RS18980 PF00550 Phosphopantetheine attachment site LJF99_RS18985 PF00550 Phosphopantetheine attachment site LJF99_RS18995 PF00501 AMP-binding enzyme LJF99_RS18995 PF13193 AMP-binding enzyme C-terminal domain LJF99_RS19000 PF07977 FabA-like domain LJF99_RS19010 PF00221 Aromatic amino acid lyase LJF99_RS19035 PF00109 Beta-ketoacyl synthase, N-terminal domain LJF99_RS19035 PF02801 Beta-ketoacyl synthase, C-terminal domain LJF99_RS19050 PF02801 Beta-ketoacyl synthase, C-terminal domain LJF99_RS19050 PF00109 Beta-ketoacyl synthase, N-terminal domain LJF99_RS19060 PF00994 Probable molybdopterin binding domain LJF99_RS19070 PF06738 Putative threonine/serine exporter LJF99_RS19075 PF12821 Threonine/Serine exporter, ThrE LJF99_RS19080 PF00186 Dihydrofolate reductase LJF99_RS19085 PF00571 CBS domain LJF99_RS19085 PF00005 ABC transporter LJF99_RS19090 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS19095 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LJF99_RS19100 PF01507 Phosphoadenosine phosphosulfate reductase family LJF99_RS19115 PF02567 Phenazine biosynthesis-like protein LJF99_RS19120 PF00152 tRNA synthetases class II (D, K and N) LJF99_RS19120 PF01336 OB-fold nucleic acid binding domain LJF99_RS19130 PF00672 HAMP domain LJF99_RS19130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS19130 PF02743 Cache domain LJF99_RS19135 PF03616 Sodium/glutamate symporter LJF99_RS19140 PF17763 Glutaminase/Asparaginase C-terminal domain LJF99_RS19140 PF00710 Asparaginase, N-terminal LJF99_RS19145 PF07023 Protein of unknown function (DUF1315) LJF99_RS19150 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LJF99_RS19150 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LJF99_RS19165 PF01343 Peptidase family S49 LJF99_RS19170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LJF99_RS19170 PF07992 Pyridine nucleotide-disulphide oxidoreductase LJF99_RS19175 PF00881 Nitroreductase family LJF99_RS19195 PF12464 Maltose acetyltransferase LJF99_RS19195 PF14602 Hexapeptide repeat of succinyl-transferase LJF99_RS19200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LJF99_RS19200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LJF99_RS19200 PF01842 ACT domain LJF99_RS19205 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LJF99_RS19210 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LJF99_RS19225 PF00107 Zinc-binding dehydrogenase LJF99_RS19225 PF08240 Alcohol dehydrogenase GroES-like domain LJF99_RS19230 PF03466 LysR substrate binding domain LJF99_RS19230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS19235 PF02378 Phosphotransferase system, EIIC LJF99_RS19235 PF00367 phosphotransferase system, EIIB LJF99_RS19235 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LJF99_RS19240 PF00474 Sodium:solute symporter family LJF99_RS19245 PF06196 Protein of unknown function (DUF997) LJF99_RS19250 PF02785 Biotin carboxylase C-terminal domain LJF99_RS19250 PF00289 Biotin carboxylase, N-terminal domain LJF99_RS19250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LJF99_RS19255 PF00364 Biotin-requiring enzyme LJF99_RS19260 PF01220 Dehydroquinase class II LJF99_RS19265 PF00501 AMP-binding enzyme LJF99_RS19265 PF16177 Acetyl-coenzyme A synthetase N-terminus LJF99_RS19265 PF13193 AMP-binding enzyme C-terminal domain LJF99_RS19275 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS19275 PF03707 Bacterial signalling protein N terminal repeat LJF99_RS19275 PF00563 EAL domain LJF99_RS19295 PF02613 Nitrate reductase delta subunit LJF99_RS19315 PF00464 Serine hydroxymethyltransferase LJF99_RS19330 PF03477 ATP cone domain LJF99_RS19335 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LJF99_RS19335 PF01872 RibD C-terminal domain LJF99_RS19340 PF00677 Lumazine binding domain LJF99_RS19345 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LJF99_RS19345 PF00925 GTP cyclohydrolase II LJF99_RS19350 PF00885 6,7-dimethyl-8-ribityllumazine synthase LJF99_RS19355 PF01029 NusB family LJF99_RS19360 PF00586 AIR synthase related protein, N-terminal domain LJF99_RS19360 PF02769 AIR synthase related protein, C-terminal domain LJF99_RS19365 PF04608 Phosphatidylglycerophosphatase A LJF99_RS19370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LJF99_RS19370 PF00005 ABC transporter LJF99_RS19375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LJF99_RS19380 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS19385 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS19385 PF12911 N-terminal TM domain of oligopeptide transport permease C LJF99_RS19390 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LJF99_RS19390 PF02779 Transketolase, pyrimidine binding domain LJF99_RS19390 PF02780 Transketolase, C-terminal domain LJF99_RS19395 PF00348 Polyprenyl synthetase LJF99_RS19400 PF02609 Exonuclease VII small subunit LJF99_RS19405 PF01618 MotA/TolQ/ExbB proton channel family LJF99_RS19410 PF13677 Membrane MotB of proton-channel complex MotA/MotB LJF99_RS19410 PF00691 OmpA family LJF99_RS19430 PF03449 Transcription elongation factor, N-terminal LJF99_RS19430 PF01272 Transcription elongation factor, GreA/GreB, C-term LJF99_RS19440 PF01985 CRS1 / YhbY (CRM) domain LJF99_RS19445 PF01728 FtsJ-like methyltransferase LJF99_RS19450 PF00004 ATPase family associated with various cellular activities (AAA) LJF99_RS19450 PF17862 AAA+ lid domain LJF99_RS19450 PF06480 FtsH Extracellular LJF99_RS19450 PF01434 Peptidase family M41 LJF99_RS19455 PF00809 Pterin binding enzyme LJF99_RS19460 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LJF99_RS19460 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LJF99_RS19460 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LJF99_RS19460 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LJF99_RS19465 PF00121 Triosephosphate isomerase LJF99_RS19470 PF03840 Preprotein translocase SecG subunit LJF99_RS19485 PF17384 RimP C-terminal SH3 domain LJF99_RS19485 PF02576 RimP N-terminal domain LJF99_RS19490 PF00575 S1 RNA binding domain LJF99_RS19490 PF08529 NusA N-terminal domain LJF99_RS19490 PF13184 NusA-like KH domain LJF99_RS19495 PF11987 Translation-initiation factor 2 LJF99_RS19495 PF04760 Translation initiation factor IF-2, N-terminal region LJF99_RS19495 PF00009 Elongation factor Tu GTP binding domain LJF99_RS19495 PF08364 Bacterial translation initiation factor IF-2 associated region LJF99_RS19500 PF02033 Ribosome-binding factor A LJF99_RS19505 PF09157 Pseudouridine synthase II TruB, C-terminal LJF99_RS19505 PF16198 tRNA pseudouridylate synthase B C-terminal domain LJF99_RS19505 PF01509 TruB family pseudouridylate synthase (N terminal domain) LJF99_RS19510 PF00312 Ribosomal protein S15 LJF99_RS19515 PF00575 S1 RNA binding domain LJF99_RS19515 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LJF99_RS19515 PF01138 3' exoribonuclease family, domain 1 LJF99_RS19515 PF03725 3' exoribonuclease family, domain 2 LJF99_RS19515 PF00013 KH domain LJF99_RS19525 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS19530 PF02635 DsrE/DsrF-like family LJF99_RS19535 PF06476 Protein of unknown function (DUF1090) LJF99_RS19545 PF03575 Peptidase family S51 LJF99_RS19560 PF13358 DDE superfamily endonuclease LJF99_RS19560 PF13592 Winged helix-turn helix LJF99_RS19570 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LJF99_RS19575 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LJF99_RS19580 PF17969 L,D-transpeptidase C-terminal domain LJF99_RS19580 PF03734 L,D-transpeptidase catalytic domain LJF99_RS19590 PF01523 Putative modulator of DNA gyrase LJF99_RS19595 PF01523 Putative modulator of DNA gyrase LJF99_RS19600 PF00258 Flavodoxin LJF99_RS19605 PF00589 Phage integrase family LJF99_RS19605 PF02899 Phage integrase, N-terminal SAM-like domain LJF99_RS19610 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS19615 PF01741 Large-conductance mechanosensitive channel, MscL LJF99_RS19625 PF01368 DHH family LJF99_RS19625 PF17768 RecJ OB domain LJF99_RS19625 PF02272 DHHA1 domain LJF99_RS19635 PF02508 Rnf-Nqr subunit, membrane protein LJF99_RS19640 PF06821 Serine hydrolase LJF99_RS19645 PF13302 Acetyltransferase (GNAT) domain LJF99_RS19665 PF00665 Integrase core domain LJF99_RS19685 PF00665 Integrase core domain LJF99_RS19690 PF01695 IstB-like ATP binding protein LJF99_RS19715 PF01734 Patatin-like phospholipase LJF99_RS19730 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LJF99_RS19730 PF04055 Radical SAM superfamily LJF99_RS19735 PF03099 Biotin/lipoate A/B protein ligase family LJF99_RS19740 PF04359 Protein of unknown function (DUF493) LJF99_RS19745 PF00768 D-alanyl-D-alanine carboxypeptidase LJF99_RS19745 PF07943 Penicillin-binding protein 5, C-terminal domain LJF99_RS19750 PF03330 Lytic transglycolase LJF99_RS19750 PF05036 Sporulation related domain LJF99_RS19760 PF01098 Cell cycle protein LJF99_RS19765 PF03717 Penicillin-binding Protein dimerisation domain LJF99_RS19765 PF00905 Penicillin binding protein transpeptidase domain LJF99_RS19770 PF02590 Predicted SPOUT methyltransferase LJF99_RS19780 PF01467 Cytidylyltransferase-like LJF99_RS19800 PF13603 Leucyl-tRNA synthetase, Domain 2 LJF99_RS19800 PF08264 Anticodon-binding domain of tRNA LJF99_RS19800 PF00133 tRNA synthetases class I (I, L, M and V) LJF99_RS19805 PF07295 Zinc-ribbon containing domain LJF99_RS19810 PF00795 Carbon-nitrogen hydrolase LJF99_RS19815 PF03471 Transporter associated domain LJF99_RS19815 PF00571 CBS domain LJF99_RS19820 PF02130 Uncharacterized protein family UPF0054 LJF99_RS19825 PF02562 PhoH-like protein LJF99_RS19830 PF01938 TRAM domain LJF99_RS19830 PF00919 Uncharacterized protein family UPF0004 LJF99_RS19830 PF04055 Radical SAM superfamily LJF99_RS19835 PF01494 FAD binding domain LJF99_RS19840 PF00313 'Cold-shock' DNA-binding domain LJF99_RS19845 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS19845 PF05230 MASE2 domain LJF99_RS19850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS19850 PF03466 LysR substrate binding domain LJF99_RS19860 PF13419 Haloacid dehalogenase-like hydrolase LJF99_RS19880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LJF99_RS19880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LJF99_RS19890 PF08207 Elongation factor P (EF-P) KOW-like domain LJF99_RS19890 PF01132 Elongation factor P (EF-P) OB domain LJF99_RS19890 PF09285 Elongation factor P, C-terminal LJF99_RS19900 PF00478 IMP dehydrogenase / GMP reductase domain LJF99_RS19910 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS19910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS19910 PF08521 Two-component sensor kinase N-terminal LJF99_RS19915 PF00072 Response regulator receiver domain LJF99_RS19915 PF00486 Transcriptional regulatory protein, C terminal LJF99_RS19935 PF00501 AMP-binding enzyme LJF99_RS19950 PF06224 Winged helix DNA-binding domain LJF99_RS19970 PF02313 Fumarate reductase subunit D LJF99_RS19975 PF02300 Fumarate reductase subunit C LJF99_RS19980 PF13085 2Fe-2S iron-sulfur cluster binding domain LJF99_RS19980 PF13183 4Fe-4S dicluster domain LJF99_RS19985 PF02910 Fumarate reductase flavoprotein C-term LJF99_RS19985 PF00890 FAD binding domain LJF99_RS19990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS19990 PF00672 HAMP domain LJF99_RS19990 PF02743 Cache domain LJF99_RS19995 PF03009 Glycerophosphoryl diester phosphodiesterase family LJF99_RS20000 PF00924 Mechanosensitive ion channel LJF99_RS20000 PF12794 Mechanosensitive ion channel inner membrane domain 1 LJF99_RS20000 PF12795 Mechanosensitive ion channel porin domain LJF99_RS20005 PF13358 DDE superfamily endonuclease LJF99_RS20005 PF13592 Winged helix-turn helix LJF99_RS20015 PF01551 Peptidase family M23 LJF99_RS20015 PF01476 LysM domain LJF99_RS20015 PF08525 Opacity-associated protein A N-terminal motif LJF99_RS20030 PF03466 LysR substrate binding domain LJF99_RS20030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS20050 PF00672 HAMP domain LJF99_RS20050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS20055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS20055 PF03466 LysR substrate binding domain LJF99_RS20060 PF17092 Penicillin-binding protein OB-like domain LJF99_RS20060 PF00912 Transglycosylase LJF99_RS20060 PF00905 Penicillin binding protein transpeptidase domain LJF99_RS20065 PF11104 Type IV pilus assembly protein PilM; LJF99_RS20085 PF07660 Secretin and TonB N terminus short domain LJF99_RS20085 PF00263 Bacterial type II and III secretion system protein LJF99_RS20085 PF11741 AMIN domain LJF99_RS20085 PF03958 Bacterial type II/III secretion system short domain LJF99_RS20090 PF01202 Shikimate kinase LJF99_RS20095 PF01761 3-dehydroquinate synthase LJF99_RS20105 PF02086 D12 class N6 adenine-specific DNA methyltransferase LJF99_RS20110 PF00834 Ribulose-phosphate 3 epimerase family LJF99_RS20115 PF13419 Haloacid dehalogenase-like hydrolase LJF99_RS20120 PF00579 tRNA synthetases class I (W and Y) LJF99_RS20130 PF00117 Glutamine amidotransferase class-I LJF99_RS20135 PF00202 Aminotransferase class-III LJF99_RS20140 PF04958 Arginine N-succinyltransferase beta subunit LJF99_RS20145 PF00171 Aldehyde dehydrogenase family LJF99_RS20155 PF13419 Haloacid dehalogenase-like hydrolase LJF99_RS20160 PF07690 Major Facilitator Superfamily LJF99_RS20165 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LJF99_RS20165 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LJF99_RS20165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LJF99_RS20165 PF10371 Domain of unknown function LJF99_RS20165 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LJF99_RS20170 PF07690 Major Facilitator Superfamily LJF99_RS20175 PF00005 ABC transporter LJF99_RS20175 PF12848 ABC transporter LJF99_RS20185 PF00128 Alpha amylase, catalytic domain LJF99_RS20185 PF16657 Maltogenic Amylase, C-terminal domain LJF99_RS20195 PF00012 Hsp70 protein LJF99_RS20210 PF07859 alpha/beta hydrolase fold LJF99_RS20215 PF04266 ASCH domain LJF99_RS20225 PF01048 Phosphorylase superfamily LJF99_RS20230 PF04973 Nicotinamide mononucleotide transporter LJF99_RS20235 PF02080 TrkA-C domain LJF99_RS20235 PF03600 Citrate transporter LJF99_RS20300 PF06071 Protein of unknown function (DUF933) LJF99_RS20300 PF01926 50S ribosome-binding GTPase LJF99_RS20305 PF01195 Peptidyl-tRNA hydrolase LJF99_RS20310 PF02872 5'-nucleotidase, C-terminal domain LJF99_RS20310 PF00149 Calcineurin-like phosphoesterase LJF99_RS20315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LJF99_RS20315 PF14572 Phosphoribosyl synthetase-associated domain LJF99_RS20325 PF08544 GHMP kinases C terminal LJF99_RS20325 PF00288 GHMP kinases N terminal domain LJF99_RS20330 PF03550 Outer membrane lipoprotein LolB LJF99_RS20335 PF01488 Shikimate / quinate 5-dehydrogenase LJF99_RS20335 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LJF99_RS20335 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LJF99_RS20340 PF03462 PCRF domain LJF99_RS20340 PF00472 RF-1 domain LJF99_RS20345 PF13847 Methyltransferase domain LJF99_RS20345 PF17827 PrmC N-terminal domain LJF99_RS20360 PF00793 DAHP synthetase I family LJF99_RS20365 PF00375 Sodium:dicarboxylate symporter family LJF99_RS20370 PF01228 Glycine radical LJF99_RS20375 PF13358 DDE superfamily endonuclease LJF99_RS20375 PF13592 Winged helix-turn helix LJF99_RS20385 PF03167 Uracil DNA glycosylase superfamily LJF99_RS20400 PF00923 Transaldolase/Fructose-6-phosphate aldolase LJF99_RS20405 PF01235 Sodium:alanine symporter family LJF99_RS20410 PF11992 Domain of unknown function (DUF3488) LJF99_RS20410 PF01841 Transglutaminase-like superfamily LJF99_RS20410 PF13559 Domain of unknown function (DUF4129) LJF99_RS20420 PF07726 ATPase family associated with various cellular activities (AAA) LJF99_RS20420 PF17863 AAA lid domain LJF99_RS20425 PF00144 Beta-lactamase LJF99_RS20430 PF07690 Major Facilitator Superfamily LJF99_RS20435 PF03466 LysR substrate binding domain LJF99_RS20435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LJF99_RS20440 PF03652 Holliday junction resolvase LJF99_RS20445 PF02622 Uncharacterized ACR, COG1678 LJF99_RS20450 PF12729 Four helix bundle sensory module for signal transduction LJF99_RS20450 PF00672 HAMP domain LJF99_RS20450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS20455 PF00672 HAMP domain LJF99_RS20455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LJF99_RS20460 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LJF99_RS20460 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LJF99_RS20465 PF04452 RNA methyltransferase LJF99_RS20470 PF04231 Endonuclease I LJF99_RS20475 PF10263 SprT-like family LJF99_RS20475 PF17283 SprT-like zinc ribbon domain LJF99_RS20480 PF02772 S-adenosylmethionine synthetase, central domain LJF99_RS20480 PF02773 S-adenosylmethionine synthetase, C-terminal domain LJF99_RS20480 PF00438 S-adenosylmethionine synthetase, N-terminal domain LJF99_RS20485 PF02780 Transketolase, C-terminal domain LJF99_RS20485 PF02779 Transketolase, pyrimidine binding domain LJF99_RS20485 PF00456 Transketolase, thiamine diphosphate binding domain LJF99_RS20495 PF01042 Endoribonuclease L-PSP LJF99_RS20500 PF03702 Anhydro-N-acetylmuramic acid kinase LJF99_RS20505 PF08525 Opacity-associated protein A N-terminal motif LJF99_RS20505 PF01551 Peptidase family M23 LJF99_RS20505 PF01476 LysM domain LJF99_RS20510 PF00579 tRNA synthetases class I (W and Y) LJF99_RS20525 PF00535 Glycosyl transferase family 2 LJF99_RS20540 PF01471 Putative peptidoglycan binding domain LJF99_RS20540 PF03734 L,D-transpeptidase catalytic domain LJF99_RS20545 PF05951 Bacterial protein of unknown function (DUF882) LJF99_RS20555 PF03458 UPF0126 domain LJF99_RS20565 PF06470 SMC proteins Flexible Hinge Domain LJF99_RS20565 PF02463 RecF/RecN/SMC N terminal domain LJF99_RS20570 PF04354 ZipA, C-terminal FtsZ-binding domain LJF99_RS20575 PF03120 NAD-dependent DNA ligase OB-fold domain LJF99_RS20575 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LJF99_RS20575 PF00533 BRCA1 C Terminus (BRCT) domain LJF99_RS20575 PF12826 Helix-hairpin-helix motif LJF99_RS20575 PF01653 NAD-dependent DNA ligase adenylation domain LJF99_RS20585 PF03477 ATP cone domain LJF99_RS20585 PF13597 Anaerobic ribonucleoside-triphosphate reductase LJF99_RS20620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LJF99_RS20620 PF00529 HlyD membrane-fusion protein of T1SS LJF99_RS20625 PF01047 MarR family LJF99_RS20640 PF03949 Malic enzyme, NAD binding domain LJF99_RS20640 PF00390 Malic enzyme, N-terminal domain LJF99_RS20645 PF00989 PAS fold LJF99_RS20645 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LJF99_RS20645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS20645 PF17203 Single cache domain 3 LJF99_RS20650 PF00072 Response regulator receiver domain LJF99_RS20650 PF12431 Transcriptional regulator LJF99_RS20675 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS20675 PF07694 5TMR of 5TMR-LYT LJF99_RS20680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LJF99_RS20685 PF00486 Transcriptional regulatory protein, C terminal LJF99_RS20685 PF00072 Response regulator receiver domain LJF99_RS20690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS20690 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS20690 PF00989 PAS fold LJF99_RS20690 PF11808 Phosphate regulon sensor protein PhoR LJF99_RS20695 PF12849 PBP superfamily domain LJF99_RS20700 PF01435 Peptidase family M48 LJF99_RS20710 PF00480 ROK family LJF99_RS20715 PF03932 CutC family LJF99_RS20720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LJF99_RS20720 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LJF99_RS20725 PF00005 ABC transporter LJF99_RS20745 PF00293 NUDIX domain LJF99_RS20755 PF00462 Glutaredoxin LJF99_RS20755 PF08534 Redoxin LJF99_RS20760 PF01699 Sodium/calcium exchanger protein LJF99_RS20765 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LJF99_RS20765 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LJF99_RS20770 PF01235 Sodium:alanine symporter family LJF99_RS20780 PF00860 Permease family LJF99_RS20785 PF00072 Response regulator receiver domain LJF99_RS20785 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS20790 PF10692 Protein of unknown function (DUF2498) LJF99_RS20795 PF01554 MatE LJF99_RS20800 PF12833 Helix-turn-helix domain LJF99_RS20805 PF00390 Malic enzyme, N-terminal domain LJF99_RS20805 PF03949 Malic enzyme, NAD binding domain LJF99_RS20810 PF00691 OmpA family LJF99_RS20810 PF01389 OmpA-like transmembrane domain LJF99_RS20815 PF01389 OmpA-like transmembrane domain LJF99_RS20815 PF00691 OmpA family LJF99_RS20820 PF01389 OmpA-like transmembrane domain LJF99_RS20820 PF00691 OmpA family LJF99_RS20835 PF00209 Sodium:neurotransmitter symporter family LJF99_RS20840 PF01734 Patatin-like phospholipase LJF99_RS20845 PF05230 MASE2 domain LJF99_RS20845 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS20850 PF13533 Biotin-lipoyl like LJF99_RS20855 PF00873 AcrB/AcrD/AcrF family LJF99_RS20865 PF04055 Radical SAM superfamily LJF99_RS20865 PF08497 Radical SAM N-terminal LJF99_RS20865 PF11842 Domain of unknown function (DUF3362) LJF99_RS20895 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LJF99_RS20900 PF02075 Crossover junction endodeoxyribonuclease RuvC LJF99_RS20905 PF00230 Major intrinsic protein LJF99_RS20910 PF01464 Transglycosylase SLT domain LJF99_RS20910 PF10145 Phage-related minor tail protein LJF99_RS20910 PF01551 Peptidase family M23 LJF99_RS20915 PF00128 Alpha amylase, catalytic domain LJF99_RS20920 PF01551 Peptidase family M23 LJF99_RS20935 PF13396 Phospholipase_D-nuclease N-terminal LJF99_RS20935 PF13091 PLD-like domain LJF99_RS20945 PF01842 ACT domain LJF99_RS20945 PF00551 Formyl transferase LJF99_RS20950 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LJF99_RS20965 PF01648 4'-phosphopantetheinyl transferase superfamily LJF99_RS20970 PF00877 NlpC/P60 family LJF99_RS20975 PF05971 RNA methyltransferase LJF99_RS20980 PF01575 MaoC like domain LJF99_RS20990 PF17969 L,D-transpeptidase C-terminal domain LJF99_RS20990 PF01476 LysM domain LJF99_RS20990 PF03734 L,D-transpeptidase catalytic domain LJF99_RS21010 PF13358 DDE superfamily endonuclease LJF99_RS21010 PF13592 Winged helix-turn helix LJF99_RS21025 PF00665 Integrase core domain LJF99_RS21030 PF01695 IstB-like ATP binding protein LJF99_RS21040 PF03527 RHS protein LJF99_RS21040 PF05593 RHS Repeat LJF99_RS21080 PF00440 Bacterial regulatory proteins, tetR family LJF99_RS21085 PF09317 Domain of unknown function (DUF1974) LJF99_RS21085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LJF99_RS21085 PF02770 Acyl-CoA dehydrogenase, middle domain LJF99_RS21085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LJF99_RS21090 PF00873 AcrB/AcrD/AcrF family LJF99_RS21100 PF00224 Pyruvate kinase, barrel domain LJF99_RS21100 PF02887 Pyruvate kinase, alpha/beta domain LJF99_RS21105 PF01418 Helix-turn-helix domain, rpiR family LJF99_RS21105 PF01380 SIS domain LJF99_RS21110 PF02685 Glucokinase LJF99_RS21115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS21120 PF00072 Response regulator receiver domain LJF99_RS21120 PF00486 Transcriptional regulatory protein, C terminal LJF99_RS21130 PF04055 Radical SAM superfamily LJF99_RS21130 PF18693 TRAM domain LJF99_RS21130 PF00919 Uncharacterized protein family UPF0004 LJF99_RS21135 PF00072 Response regulator receiver domain LJF99_RS21150 PF02001 Protein of unknown function DUF134 LJF99_RS21165 PF07969 Amidohydrolase family LJF99_RS21175 PF02049 Flagellar hook-basal body complex protein FliE LJF99_RS21180 PF08345 Flagellar M-ring protein C-terminal LJF99_RS21180 PF01514 Secretory protein of YscJ/FliF family LJF99_RS21185 PF14841 FliG middle domain LJF99_RS21185 PF14842 FliG N-terminal domain LJF99_RS21185 PF01706 FliG C-terminal domain LJF99_RS21195 PF18269 T3SS EscN ATPase C-terminal domain LJF99_RS21195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LJF99_RS21215 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LJF99_RS21215 PF02154 Flagellar motor switch protein FliM LJF99_RS21220 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LJF99_RS21225 PF04347 Flagellar biosynthesis protein, FliO LJF99_RS21230 PF00813 FliP family LJF99_RS21235 PF01313 Bacterial export proteins, family 3 LJF99_RS21240 PF01311 Bacterial export proteins, family 1 LJF99_RS21245 PF01312 FlhB HrpN YscU SpaS Family LJF99_RS21250 PF00771 FHIPEP family LJF99_RS21255 PF00448 SRP54-type protein, GTPase domain LJF99_RS21260 PF10609 NUBPL iron-transfer P-loop NTPase LJF99_RS21265 PF04539 Sigma-70 region 3 LJF99_RS21265 PF04542 Sigma-70 region 2 LJF99_RS21265 PF04545 Sigma-70, region 4 LJF99_RS21270 PF00072 Response regulator receiver domain LJF99_RS21275 PF04344 Chemotaxis phosphatase, CheZ LJF99_RS21280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS21280 PF01584 CheW-like domain LJF99_RS21280 PF00072 Response regulator receiver domain LJF99_RS21280 PF02895 Signal transducing histidine kinase, homodimeric domain LJF99_RS21280 PF01627 Hpt domain LJF99_RS21285 PF01339 CheB methylesterase LJF99_RS21285 PF00072 Response regulator receiver domain LJF99_RS21290 PF01618 MotA/TolQ/ExbB proton channel family LJF99_RS21295 PF13677 Membrane MotB of proton-channel complex MotA/MotB LJF99_RS21295 PF00691 OmpA family LJF99_RS21300 PF13614 AAA domain LJF99_RS21310 PF01584 CheW-like domain LJF99_RS21325 PF00005 ABC transporter LJF99_RS21330 PF03379 CcmB protein LJF99_RS21335 PF01578 Cytochrome C assembly protein LJF99_RS21340 PF04995 Heme exporter protein D (CcmD) LJF99_RS21345 PF03100 CcmE LJF99_RS21350 PF01578 Cytochrome C assembly protein LJF99_RS21350 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LJF99_RS21355 PF08534 Redoxin LJF99_RS21360 PF03918 Cytochrome C biogenesis protein LJF99_RS21370 PF04333 MlaA lipoprotein LJF99_RS21375 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LJF99_RS21375 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LJF99_RS21380 PF00462 Glutaredoxin LJF99_RS21385 PF01189 16S rRNA methyltransferase RsmB/F LJF99_RS21385 PF01029 NusB family LJF99_RS21400 PF01243 Pyridoxamine 5'-phosphate oxidase LJF99_RS21400 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LJF99_RS21420 PF13508 Acetyltransferase (GNAT) domain LJF99_RS21430 PF13358 DDE superfamily endonuclease LJF99_RS21430 PF13592 Winged helix-turn helix LJF99_RS21440 PF08007 Cupin superfamily protein LJF99_RS21445 PF08328 Adenylosuccinate lyase C-terminal LJF99_RS21445 PF00206 Lyase LJF99_RS21450 PF04356 Protein of unknown function (DUF489) LJF99_RS21460 PF00293 NUDIX domain LJF99_RS21465 PF00849 RNA pseudouridylate synthase LJF99_RS21475 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LJF99_RS21480 PF07690 Major Facilitator Superfamily LJF99_RS21485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LJF99_RS21485 PF02378 Phosphotransferase system, EIIC LJF99_RS21485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LJF99_RS21505 PF13592 Winged helix-turn helix LJF99_RS21505 PF13358 DDE superfamily endonuclease LJF99_RS21515 PF00290 Tryptophan synthase alpha chain LJF99_RS21520 PF00291 Pyridoxal-phosphate dependent enzyme LJF99_RS21525 PF00218 Indole-3-glycerol phosphate synthase LJF99_RS21525 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LJF99_RS21530 PF02885 Glycosyl transferase family, helical bundle domain LJF99_RS21530 PF00591 Glycosyl transferase family, a/b domain LJF99_RS21535 PF00591 Glycosyl transferase family, a/b domain LJF99_RS21535 PF00117 Glutamine amidotransferase class-I LJF99_RS21535 PF02885 Glycosyl transferase family, helical bundle domain LJF99_RS21540 PF04715 Anthranilate synthase component I, N terminal region LJF99_RS21540 PF00425 chorismate binding enzyme LJF99_RS21545 PF02811 PHP domain LJF99_RS21550 PF01300 Telomere recombination LJF99_RS21555 PF02616 Segregation and condensation protein ScpA LJF99_RS21560 PF04079 Segregation and condensation complex subunit ScpB LJF99_RS21565 PF00849 RNA pseudouridylate synthase LJF99_RS21565 PF01479 S4 domain LJF99_RS21590 PF08361 MAATS-type transcriptional repressor, C-terminal region LJF99_RS21590 PF00440 Bacterial regulatory proteins, tetR family LJF99_RS21595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LJF99_RS21595 PF00529 HlyD membrane-fusion protein of T1SS LJF99_RS21600 PF00873 AcrB/AcrD/AcrF family LJF99_RS21605 PF02321 Outer membrane efflux protein LJF99_RS21610 PF13592 Winged helix-turn helix LJF99_RS21610 PF13358 DDE superfamily endonuclease LJF99_RS21615 PF16363 GDP-mannose 4,6 dehydratase LJF99_RS21620 PF04321 RmlD substrate binding domain LJF99_RS21625 PF00483 Nucleotidyl transferase LJF99_RS21630 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LJF99_RS21640 PF00437 Type II/IV secretion system protein LJF99_RS21640 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LJF99_RS21645 PF00482 Type II secretion system (T2SS), protein F LJF99_RS21650 PF07963 Prokaryotic N-terminal methylation motif LJF99_RS21650 PF08334 Type II secretion system (T2SS), protein G LJF99_RS21690 PF00263 Bacterial type II and III secretion system protein LJF99_RS21690 PF03958 Bacterial type II/III secretion system short domain LJF99_RS21700 PF00005 ABC transporter LJF99_RS21715 PF02350 UDP-N-acetylglucosamine 2-epimerase LJF99_RS21735 PF02080 TrkA-C domain LJF99_RS21735 PF03600 Citrate transporter LJF99_RS21740 PF03600 Citrate transporter LJF99_RS21740 PF02080 TrkA-C domain LJF99_RS21755 PF01370 NAD dependent epimerase/dehydratase family LJF99_RS21760 PF00953 Glycosyl transferase family 4 LJF99_RS21765 PF02719 Polysaccharide biosynthesis protein LJF99_RS21780 PF00535 Glycosyl transferase family 2 LJF99_RS21795 PF00534 Glycosyl transferases group 1 LJF99_RS21795 PF13439 Glycosyltransferase Family 4 LJF99_RS21810 PF02397 Bacterial sugar transferase LJF99_RS21820 PF04337 Protein of unknown function, DUF480 LJF99_RS21825 PF00271 Helicase conserved C-terminal domain LJF99_RS21825 PF00176 SNF2 family N-terminal domain LJF99_RS21825 PF04434 SWIM zinc finger LJF99_RS21835 PF00665 Integrase core domain LJF99_RS21840 PF01695 IstB-like ATP binding protein LJF99_RS21855 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LJF99_RS21860 PF00676 Dehydrogenase E1 component LJF99_RS21865 PF02779 Transketolase, pyrimidine binding domain LJF99_RS21865 PF02780 Transketolase, C-terminal domain LJF99_RS21870 PF13358 DDE superfamily endonuclease LJF99_RS21870 PF13592 Winged helix-turn helix LJF99_RS21875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LJF99_RS21875 PF00364 Biotin-requiring enzyme LJF99_RS21875 PF02817 e3 binding domain LJF99_RS21880 PF00313 'Cold-shock' DNA-binding domain LJF99_RS21920 PF11871 Domain of unknown function (DUF3391) LJF99_RS21920 PF01966 HD domain LJF99_RS21925 PF00849 RNA pseudouridylate synthase LJF99_RS21925 PF01479 S4 domain LJF99_RS21935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LJF99_RS21940 PF12850 Calcineurin-like phosphoesterase superfamily domain LJF99_RS21960 PF01584 CheW-like domain LJF99_RS21960 PF00072 Response regulator receiver domain LJF99_RS21965 PF03705 CheR methyltransferase, all-alpha domain LJF99_RS21965 PF01739 CheR methyltransferase, SAM binding domain LJF99_RS21970 PF00460 Flagella basal body rod protein LJF99_RS21975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LJF99_RS21975 PF00460 Flagella basal body rod protein LJF99_RS21985 PF00460 Flagella basal body rod protein LJF99_RS21985 PF07559 Flagellar basal body protein FlaE LJF99_RS21985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LJF99_RS21990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LJF99_RS21990 PF00460 Flagella basal body rod protein LJF99_RS21995 PF00460 Flagella basal body rod protein LJF99_RS21995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LJF99_RS22000 PF02107 Flagellar L-ring protein LJF99_RS22005 PF02119 Flagellar P-ring protein LJF99_RS22010 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LJF99_RS22010 PF10135 Rod binding protein LJF99_RS22025 PF03448 MgtE intracellular N domain LJF99_RS22025 PF01769 Divalent cation transporter LJF99_RS22025 PF00571 CBS domain LJF99_RS22030 PF02541 Ppx/GppA phosphatase family LJF99_RS22035 PF13089 Polyphosphate kinase N-terminal domain LJF99_RS22035 PF17941 Polyphosphate kinase C-terminal domain 1 LJF99_RS22035 PF13090 Polyphosphate kinase C-terminal domain 2 LJF99_RS22035 PF02503 Polyphosphate kinase middle domain LJF99_RS22055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS22055 PF00512 His Kinase A (phospho-acceptor) domain LJF99_RS22055 PF13188 PAS domain LJF99_RS22060 PF02954 Bacterial regulatory protein, Fis family LJF99_RS22060 PF00072 Response regulator receiver domain LJF99_RS22060 PF00158 Sigma-54 interaction domain LJF99_RS22065 PF01784 NIF3 (NGG1p interacting factor 3) LJF99_RS22070 PF00551 Formyl transferase LJF99_RS22075 PF00586 AIR synthase related protein, N-terminal domain LJF99_RS22075 PF02769 AIR synthase related protein, C-terminal domain LJF99_RS22090 PF00308 Bacterial dnaA protein LJF99_RS22095 PF00463 Isocitrate lyase family LJF99_RS22100 PF01274 Malate synthase LJF99_RS22110 PF14437 MafB19-like deaminase LJF99_RS22115 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS22120 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS22125 PF00005 ABC transporter LJF99_RS22130 PF01895 PhoU domain LJF99_RS22135 PF01595 Cyclin M transmembrane N-terminal domain LJF99_RS22135 PF00571 CBS domain LJF99_RS22135 PF03471 Transporter associated domain LJF99_RS22150 PF13520 Amino acid permease LJF99_RS22155 PF04116 Fatty acid hydroxylase superfamily LJF99_RS22160 PF00005 ABC transporter LJF99_RS22165 PF00528 Binding-protein-dependent transport system inner membrane component LJF99_RS22170 PF00497 Bacterial extracellular solute-binding proteins, family 3 LJF99_RS22175 PF08448 PAS fold LJF99_RS22175 PF00990 Diguanylate cyclase, GGDEF domain LJF99_RS22180 PF07690 Major Facilitator Superfamily LJF99_RS22185 PF07730 Histidine kinase LJF99_RS22185 PF05231 MASE1 LJF99_RS22185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LJF99_RS22190 PF00072 Response regulator receiver domain LJF99_RS22190 PF00196 Bacterial regulatory proteins, luxR family LJF99_RS22195 PF01272 Transcription elongation factor, GreA/GreB, C-term LJF99_RS22195 PF14760 Rnk N-terminus LJF99_RS22210 PF00245 Alkaline phosphatase LJF99_RS22215 PF00245 Alkaline phosphatase LJF99_RS22220 PF01926 50S ribosome-binding GTPase LJF99_RS22225 PF00850 Histone deacetylase domain LJF99_RS22235 PF13307 Helicase C-terminal domain LJF99_RS22235 PF06733 DEAD_2 LJF99_RS22240 PF13609 Gram-negative porin LJF99_RS22250 PF00155 Aminotransferase class I and II LJF99_RS22255 PF05872 Bacterial protein of unknown function (DUF853) LJF99_RS22270 PF03772 Competence protein LJF99_RS22270 PF00753 Metallo-beta-lactamase superfamily LJF99_RS22275 PF00664 ABC transporter transmembrane region LJF99_RS22275 PF00005 ABC transporter LJF99_RS22280 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LJF99_RS22285 PF03966 Trm112p-like protein LJF99_RS22290 PF02348 Cytidylyltransferase LJF99_RS22295 PF00072 Response regulator receiver domain LJF99_RS22295 PF00196 Bacterial regulatory proteins, luxR family LJF99_RS22300 PF01541 GIY-YIG catalytic domain LJF99_RS22300 PF02151 UvrB/uvrC motif LJF99_RS22300 PF08459 UvrC Helix-hairpin-helix N-terminal LJF99_RS22305 PF01066 CDP-alcohol phosphatidyltransferase LJF99_RS22325 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system LJF99_RS22470 PF00816 H-NS histone family LJF99_RS22495 PF00665 Integrase core domain LJF99_RS22500 PF01695 IstB-like ATP binding protein LJF99_RS22520 PF01906 Putative heavy-metal-binding LJF99_RS22525 PF13358 DDE superfamily endonuclease LJF99_RS22525 PF13592 Winged helix-turn helix LJF99_RS22535 PF00102 Protein-tyrosine phosphatase LJF99_RS22535 PF09013 YopH, N-terminal LJF99_RS22550 PF00872 Transposase, Mutator family LJF99_RS22560 PF13614 AAA domain LJF99_RS22570 PF00816 H-NS histone family LJF99_RS22600 PF13614 AAA domain LJF99_RS22605 PF00239 Resolvase, N terminal domain LJF99_RS22605 PF02796 Helix-turn-helix domain of resolvase LJF99_RS22615 PF00884 Sulfatase LJF99_RS22615 PF08019 Phosphoethanolamine transferase EptA/EptB LJF99_RS22620 PF00884 Sulfatase LJF99_RS22620 PF08019 Phosphoethanolamine transferase EptA/EptB LJF99_RS22640 PF01848 Hok/gef family LJF99_RS22645 PF01695 IstB-like ATP binding protein LJF99_RS22650 PF00665 Integrase core domain LJF99_RS22680 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LJF99_RS22690 PF04002 RadC-like JAB domain LJF99_RS22710 PF01555 DNA methylase LJF99_RS22720 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A LJF99_RS22735 PF01464 Transglycosylase SLT domain LJF99_RS22745 PF18272 single-stranded DNA binding TraI N-terminal subdomain LJF99_RS22745 PF07057 DNA helicase TraI LJF99_RS22745 PF18340 DNA relaxase TraI 2B/2B-like domain LJF99_RS22745 PF08751 TrwC relaxase LJF99_RS22750 PF00239 Resolvase, N terminal domain LJF99_RS22750 PF02796 Helix-turn-helix domain of resolvase LJF99_RS22765 PF13700 Domain of unknown function (DUF4158) LJF99_RS22765 PF01526 Tn3 transposase DDE domain LJF99_RS22785 PF13614 AAA domain LJF99_RS22800 PF00589 Phage integrase family LJF99_RS22885 PF02371 Transposase IS116/IS110/IS902 family LJF99_RS22885 PF01548 Transposase LJF99_RS22900 PF09632 Rac1-binding domain LJF99_RS22900 PF00069 Protein kinase domain LJF99_RS22910 PF01848 Hok/gef family LJF99_RS22935 PF13358 DDE superfamily endonuclease LJF99_RS22935 PF13592 Winged helix-turn helix LJF99_RS22940 PF00665 Integrase core domain LJF99_RS22945 PF01695 IstB-like ATP binding protein LJF99_RS22950 PF00872 Transposase, Mutator family LJF99_RS22955 PF00561 alpha/beta hydrolase fold LJF99_RS22975 PF03496 ADP-ribosyltransferase exoenzyme LJF99_RS22985 PF01312 FlhB HrpN YscU SpaS Family LJF99_RS22990 PF01311 Bacterial export proteins, family 1 LJF99_RS22995 PF01313 Bacterial export proteins, family 3 LJF99_RS23000 PF00813 FliP family LJF99_RS23005 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LJF99_RS23020 PF02874 ATP synthase alpha/beta family, beta-barrel domain LJF99_RS23020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LJF99_RS23020 PF18269 T3SS EscN ATPase C-terminal domain LJF99_RS23025 PF07201 HrpJ-like domain LJF99_RS23030 PF09059 TyeA LJF99_RS23040 PF09474 Type III secretion system YscX (type_III_YscX) LJF99_RS23050 PF00771 FHIPEP family LJF99_RS23055 PF09621 Type III secretion system regulator (LcrR) LJF99_RS23060 PF07216 LcrG protein LJF99_RS23065 PF04792 V antigen (LcrV) protein LJF99_RS23070 PF07720 Tetratricopeptide repeat LJF99_RS23075 PF04888 Secretion system effector C (SseC) like family LJF99_RS23080 PF05844 YopD protein LJF99_RS23085 PF05932 Tir chaperone protein (CesT) family LJF99_RS23095 PF09619 Type III secretion system lipoprotein chaperone (YscW) LJF99_RS23100 PF12833 Helix-turn-helix domain LJF99_RS23110 PF05932 Tir chaperone protein (CesT) family LJF99_RS23115 PF00263 Bacterial type II and III secretion system protein LJF99_RS23115 PF03958 Bacterial type II/III secretion system short domain LJF99_RS23120 PF16697 Inner membrane component of T3SS, cytoplasmic domain LJF99_RS23120 PF16693 Inner membrane component of T3SS, periplasmic domain LJF99_RS23130 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF LJF99_RS23135 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) LJF99_RS23140 PF09025 YopR, type III needle-polymerisation regulator LJF99_RS23145 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI LJF99_RS23150 PF01514 Secretory protein of YscJ/FliF family LJF99_RS23155 PF06578 YOP proteins translocation protein K (YscK) LJF99_RS23160 PF02108 Flagellar assembly protein FliH LJF99_RS23170 PF02371 Transposase IS116/IS110/IS902 family LJF99_RS23170 PF01548 Transposase LJF99_RS23190 PF00872 Transposase, Mutator family LJF99_RS23195 PF08751 TrwC relaxase LJF99_RS23195 PF18272 single-stranded DNA binding TraI N-terminal subdomain LJF99_RS23195 PF07057 DNA helicase TraI LJF99_RS23195 PF18340 DNA relaxase TraI 2B/2B-like domain LJF99_RS23200 PF10412 Type IV secretion-system coupling protein DNA-binding domain LJF99_RS23200 PF12615 F sex factor protein N terminal LJF99_RS23205 PF05818 Enterobacterial TraT complement resistance protein LJF99_RS23215 PF07916 TraG-like protein, N-terminal region LJF99_RS23220 PF06122 Conjugative relaxosome accessory transposon protein LJF99_RS23225 PF13728 F plasmid transfer operon protein LJF99_RS23235 PF06986 Type-1V conjugative transfer system mating pair stabilisation LJF99_RS23245 PF09673 Type-F conjugative transfer system pilin assembly protein LJF99_RS23250 PF06834 TraU protein LJF99_RS23255 PF12477 Sex factor F TraW protein N terminal LJF99_RS23265 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer LJF99_RS23270 PF09676 Type IV conjugative transfer system lipoprotein (TraV) LJF99_RS23275 PF03743 Bacterial conjugation TrbI-like protein LJF99_RS23285 PF05309 TraE protein LJF99_RS23290 PF07178 TraL protein LJF99_RS23295 PF05513 TraA LJF99_RS23320 PF13614 AAA domain LJF99_RS23335 PF00816 H-NS histone family LJF99_RS23360 PF02371 Transposase IS116/IS110/IS902 family LJF99_RS23360 PF01548 Transposase LJF99_RS23380 PF00593 TonB dependent receptor LJF99_RS23380 PF07715 TonB-dependent Receptor Plug Domain LJF99_RS23395 PF00816 H-NS histone family LJF99_RS23435 PF00665 Integrase core domain LJF99_RS23435 PF13333 Integrase core domain LJF99_RS23435 PF13276 HTH-like domain LJF99_RS23440 PF00665 Integrase core domain LJF99_RS23440 PF13936 Helix-turn-helix domain LJF99_RS23450 PF10609 NUBPL iron-transfer P-loop NTPase LJF99_RS23455 PF02796 Helix-turn-helix domain of resolvase LJF99_RS23455 PF00239 Resolvase, N terminal domain LJF99_RS23500 PF00149 Calcineurin-like phosphoesterase LJF99_RS23505 PF00239 Resolvase, N terminal domain LJF99_RS23505 PF02796 Helix-turn-helix domain of resolvase LJF99_RS23530 PF01848 Hok/gef family LJF99_RS23545 PF04002 RadC-like JAB domain LJF99_RS23565 PF01555 DNA methylase LJF99_RS23580 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A LJF99_RS23595 PF01464 Transglycosylase SLT domain LJF99_RS23600 PF05261 TraM protein, DNA-binding LJF99_RS23605 PF08751 TrwC relaxase LJF99_RS23605 PF18340 DNA relaxase TraI 2B/2B-like domain LJF99_RS23605 PF07057 DNA helicase TraI LJF99_RS23605 PF18272 single-stranded DNA binding TraI N-terminal subdomain LJF99_RS23610 PF12615 F sex factor protein N terminal LJF99_RS23610 PF10412 Type IV secretion-system coupling protein DNA-binding domain LJF99_RS23615 PF05818 Enterobacterial TraT complement resistance protein LJF99_RS23625 PF07916 TraG-like protein, N-terminal region LJF99_RS23630 PF06122 Conjugative relaxosome accessory transposon protein LJF99_RS23635 PF13728 F plasmid transfer operon protein LJF99_RS23645 PF13728 F plasmid transfer operon protein LJF99_RS23650 PF06986 Type-1V conjugative transfer system mating pair stabilisation LJF99_RS23655 PF09673 Type-F conjugative transfer system pilin assembly protein LJF99_RS23660 PF06834 TraU protein LJF99_RS23665 PF12477 Sex factor F TraW protein N terminal LJF99_RS23675 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer LJF99_RS23680 PF09676 Type IV conjugative transfer system lipoprotein (TraV) LJF99_RS23685 PF03743 Bacterial conjugation TrbI-like protein LJF99_RS23695 PF05309 TraE protein LJF99_RS23700 PF07178 TraL protein LJF99_RS23705 PF05513 TraA LJF99_RS23730 PF01381 Helix-turn-helix LJF99_RS23775 PF13614 AAA domain LJF99_RS23780 PF02195 ParB-like nuclease domain LJF99_RS23780 PF06613 KorB C-terminal beta-barrel domain LJF99_RS23780 PF08535 KorB domain LJF99_RS23805 PF13362 Toprim domain LJF99_RS23805 PF18818 Metallopeptidase superfamily domain LJF99_RS23805 PF08401 Domain of unknown function (DUF1738) LJF99_RS23815 PF18818 Metallopeptidase superfamily domain LJF99_RS23815 PF08401 Domain of unknown function (DUF1738) LJF99_RS23815 PF13362 Toprim domain LJF99_RS23820 PF02534 Type IV secretory system Conjugative DNA transfer LJF99_RS23825 PF00437 Type II/IV secretion system protein LJF99_RS23830 PF03743 Bacterial conjugation TrbI-like protein LJF99_RS23835 PF03524 Conjugal transfer protein LJF99_RS23840 PF04335 VirB8 protein LJF99_RS23850 PF04610 TrbL/VirB6 plasmid conjugal transfer protein LJF99_RS23865 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LJF99_RS23885 PF01396 Topoisomerase DNA binding C4 zinc finger LJF99_RS23885 PF01751 Toprim domain LJF99_RS23885 PF01131 DNA topoisomerase LJF99_RS23895 PF01396 Topoisomerase DNA binding C4 zinc finger LJF99_RS23895 PF01751 Toprim domain LJF99_RS23895 PF01131 DNA topoisomerase LJF99_RS23925 PF02796 Helix-turn-helix domain of resolvase LJF99_RS23925 PF00239 Resolvase, N terminal domain LJF99_RS23935 PF13610 DDE domain LJF99_RS23950 PF00809 Pterin binding enzyme LJF99_RS23955 PF00893 Small Multidrug Resistance protein LJF99_RS23965 PF06442 R67 dihydrofolate reductase LJF99_RS23975 PF13610 DDE domain LJF99_RS23985 PF02909 Tetracyclin repressor-like, C-terminal domain LJF99_RS23985 PF00440 Bacterial regulatory proteins, tetR family LJF99_RS23990 PF07690 Major Facilitator Superfamily LJF99_RS24000 PF00589 Phage integrase family LJF99_RS24005 PF13610 DDE domain LJF99_RS24015 PF00239 Resolvase, N terminal domain LJF99_RS24015 PF02796 Helix-turn-helix domain of resolvase LJF99_RS24035 PF02909 Tetracyclin repressor-like, C-terminal domain LJF99_RS24035 PF00440 Bacterial regulatory proteins, tetR family LJF99_RS24040 PF07690 Major Facilitator Superfamily LJF99_RS24050 PF00589 Phage integrase family LJF99_RS24065 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LJF99_RS24080 PF16793 RepB DNA-primase from phage plasmid LJF99_RS24140 PF04221 RelB antitoxin LJF99_RS24145 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LJF99_RS24155 PF04837 MbeB-like, N-term conserved region LJF99_RS24170 PF05713 Bacterial mobilisation protein (MobC) LJF99_RS24255 PF00872 Transposase, Mutator family LJF99_RS24260 PF03421 YopJ Serine/Threonine acetyltransferase LJF99_RS24280 PF00155 Aminotransferase class I and II LJF99_RS24285 PF00005 ABC transporter LJF99_RS24315 PF03853 YjeF-related protein N-terminus LJF99_RS24315 PF01256 Carbohydrate kinase LJF99_RS24350 PF01522 Polysaccharide deacetylase LJF99_RS24350 PF14883 Hypothetical glycosyl hydrolase family 13 LJF99_RS24355 PF01522 Polysaccharide deacetylase LJF99_RS24355 PF14883 Hypothetical glycosyl hydrolase family 13