C2U39_RS00005 SM00354 helix_turn _helix lactose operon repressor C2U39_RS00010 SM01038 Beta galactosidase small chain C2U39_RS00060 SM00829 Enoylreductase C2U39_RS00080 SM00382 ATPases associated with a variety of cellular activities C2U39_RS00110 SM01321 C2U39_RS00110 C2U39_RS00135 SM00382 ATPases associated with a variety of cellular activities C2U39_RS00135 SM00530 Helix-turn-helix XRE-family like proteins C2U39_RS00390 SM00326 Src homology 3 domains C2U39_RS00435 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS00450 SM00530 Helix-turn-helix XRE-family like proteins C2U39_RS00525 SM00257 Lysin motif C2U39_RS00590 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U39_RS00600 SM00382 ATPases associated with a variety of cellular activities C2U39_RS00600 SM00448 cheY-homologous receiver domain C2U39_RS00605 SM00091 PAS domain C2U39_RS00605 SM00387 Histidine kinase-like ATPases C2U39_RS00605 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS00615 SM01230 C2U39_RS00615 C2U39_RS00650 SM00487 DEAD-like helicases superfamily C2U39_RS00650 SM00490 helicase superfamily c-terminal domain C2U39_RS00655 SM00155 Phospholipase D. Active site motifs. C2U39_RS00680 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS00690 SM00354 helix_turn _helix lactose operon repressor C2U39_RS00710 SM00450 Rhodanese Homology Domain C2U39_RS00750 SM00316 Ribosomal protein S1-like RNA-binding domain C2U39_RS00750 SM00732 Likely ribonuclease with RNase H fold. C2U39_RS00760 SM00448 cheY-homologous receiver domain C2U39_RS00760 SM00862 Transcriptional regulatory protein, C terminal C2U39_RS00765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS00765 SM00387 Histidine kinase-like ATPases C2U39_RS00765 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS00775 SM01403 C2U39_RS00775 C2U39_RS00795 SM01382 C2U39_RS00795 C2U39_RS00795 SM01383 C2U39_RS00795 C2U39_RS00810 SM00322 K homology RNA-binding domain C2U39_RS00830 SM01374 C2U39_RS00830 C2U39_RS00900 SM00363 S4 RNA-binding domain C2U39_RS00900 SM01390 C2U39_RS00900 C2U39_RS00905 SM00662 RNA polymerases D C2U39_RS00985 SM00822 C2U39_RS00985 C2U39_RS01075 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS01080 SM00155 Phospholipase D. Active site motifs. C2U39_RS01110 SM00382 ATPases associated with a variety of cellular activities C2U39_RS01110 SM00962 SRP54-type protein, GTPase domain C2U39_RS01110 SM00963 SRP54-type protein, helical bundle domain C2U39_RS01115 SM00382 ATPases associated with a variety of cellular activities C2U39_RS01130 SM00947 Carbonic anhydrase C2U39_RS01135 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U39_RS01135 SM00866 C2U39_RS01135 C2U39_RS01165 SM00052 Putative diguanylate phosphodiesterase C2U39_RS01170 SM00052 Putative diguanylate phosphodiesterase C2U39_RS01170 SM00267 diguanylate cyclase C2U39_RS01200 SM00965 Secretin and TonB N terminus short domain C2U39_RS01215 SM00382 ATPases associated with a variety of cellular activities C2U39_RS01285 SM00316 Ribosomal protein S1-like RNA-binding domain C2U39_RS01350 SM01018 B12 binding domain C2U39_RS01365 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS01370 SM00448 cheY-homologous receiver domain C2U39_RS01370 SM00862 Transcriptional regulatory protein, C terminal C2U39_RS01410 SM00876 Biotin and Thiamin Synthesis associated domain C2U39_RS01435 SM00267 diguanylate cyclase C2U39_RS01535 SM01219 C2U39_RS01535 C2U39_RS01595 SM00852 Probable molybdopterin binding domain C2U39_RS01615 SM00344 helix_turn_helix ASNC type C2U39_RS01630 SM00642 Alpha-amylase domain C2U39_RS01740 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C2U39_RS01785 SM00487 DEAD-like helicases superfamily C2U39_RS01785 SM00490 helicase superfamily c-terminal domain C2U39_RS01855 SM00357 Cold shock protein domain C2U39_RS01855 SM00955 C2U39_RS01855 C2U39_RS01870 SM00421 helix_turn_helix, Lux Regulon C2U39_RS01945 SM00387 Histidine kinase-like ATPases C2U39_RS01945 SM00433 TopoisomeraseII C2U39_RS01950 SM00434 DNA Topoisomerase IV C2U39_RS01980 SM00938 Nitrogen regulatory protein P-II C2U39_RS01985 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U39_RS01985 SM00267 diguanylate cyclase C2U39_RS01995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS02005 SM00448 cheY-homologous receiver domain C2U39_RS02005 SM00862 Transcriptional regulatory protein, C terminal C2U39_RS02010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS02010 SM00387 Histidine kinase-like ATPases C2U39_RS02010 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS02015 SM00357 Cold shock protein domain C2U39_RS02030 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS02040 SM00421 helix_turn_helix, Lux Regulon C2U39_RS02050 SM01126 C2U39_RS02050 C2U39_RS02065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS02065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS02100 SM00530 Helix-turn-helix XRE-family like proteins C2U39_RS02180 SM00382 ATPases associated with a variety of cellular activities C2U39_RS02185 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U39_RS02205 SM00382 ATPases associated with a variety of cellular activities C2U39_RS02280 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C2U39_RS02285 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C2U39_RS02335 SM00749 bacterial OsmY and nodulation domain C2U39_RS02400 SM00382 ATPases associated with a variety of cellular activities C2U39_RS02400 SM00448 cheY-homologous receiver domain C2U39_RS02445 SM00858 C2U39_RS02445 C2U39_RS02645 SM00842 Cell division protein FtsA C2U39_RS02650 SM00864 Tubulin/FtsZ family, GTPase domain C2U39_RS02650 SM00865 Tubulin/FtsZ family, C-terminal domain C2U39_RS02665 SM00957 SecA DEAD-like domain C2U39_RS02665 SM00958 SecA preprotein cross-linking domain C2U39_RS02730 SM00644 C2U39_RS02730 C2U39_RS02735 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U39_RS02735 SM00895 C2U39_RS02735 C2U39_RS02760 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS02760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS02765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS02765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS02780 SM00052 Putative diguanylate phosphodiesterase C2U39_RS02800 SM00833 Cobalamin synthesis protein cobW C-terminal domain C2U39_RS02820 SM00905 Dihydroneopterin aldolase C2U39_RS02825 SM01207 C2U39_RS02825 C2U39_RS02875 SM00344 helix_turn_helix ASNC type C2U39_RS02880 SM01266 C2U39_RS02880 C2U39_RS02885 SM00642 Alpha-amylase domain C2U39_RS02895 SM00354 helix_turn _helix lactose operon repressor C2U39_RS02910 SM00870 C2U39_RS02910 C2U39_RS02925 SM00851 MGS-like domain C2U39_RS03010 SM00382 ATPases associated with a variety of cellular activities C2U39_RS03080 SM01130 C2U39_RS03080 C2U39_RS03085 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2U39_RS03085 SM00267 diguanylate cyclase C2U39_RS03140 SM00478 endonuclease III C2U39_RS03150 SM00382 ATPases associated with a variety of cellular activities C2U39_RS03170 SM01118 C2U39_RS03170 C2U39_RS03190 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U39_RS03190 SM00895 C2U39_RS03190 C2U39_RS03205 SM00363 S4 RNA-binding domain C2U39_RS03220 SM00382 ATPases associated with a variety of cellular activities C2U39_RS03275 SM00421 helix_turn_helix, Lux Regulon C2U39_RS03320 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS03365 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U39_RS03375 SM00450 Rhodanese Homology Domain C2U39_RS03390 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2U39_RS03390 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U39_RS03390 SM00091 PAS domain C2U39_RS03390 SM00267 diguanylate cyclase C2U39_RS03405 SM00859 Semialdehyde dehydrogenase, NAD binding domain C2U39_RS03470 SM01266 C2U39_RS03470 C2U39_RS03485 SM00382 ATPases associated with a variety of cellular activities C2U39_RS03520 SM00822 C2U39_RS03520 C2U39_RS03535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS03535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS03545 SM00287 Bacterial SH3 domain homologues C2U39_RS03565 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2U39_RS03670 SM00358 Double-stranded RNA binding motif C2U39_RS03670 SM00535 Ribonuclease III family C2U39_RS03690 SM00644 C2U39_RS03690 C2U39_RS03700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS03700 SM00387 Histidine kinase-like ATPases C2U39_RS03700 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS03700 SM00448 cheY-homologous receiver domain C2U39_RS03710 SM00954 Region found in RelA / SpoT proteins C2U39_RS03725 SM01192 C2U39_RS03725 C2U39_RS03725 SM01193 C2U39_RS03725 C2U39_RS03765 SM00257 Lysin motif C2U39_RS03790 SM00400 zinc finger C2U39_RS03790 SM00493 C2U39_RS03790 C2U39_RS03790 SM00766 DNA primase DnaG DnaB-binding C2U39_RS03805 SM00028 Tetratricopeptide repeats C2U39_RS03810 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins C2U39_RS03810 SM00632 C2U39_RS03810 C2U39_RS03810 SM00642 Alpha-amylase domain C2U39_RS03825 SM01209 C2U39_RS03825 C2U39_RS03825 SM01210 C2U39_RS03825 C2U39_RS03830 SM00798 AICARFT/IMPCHase bienzyme C2U39_RS03830 SM00851 MGS-like domain C2U39_RS03835 SM00422 helix_turn_helix, mercury resistance C2U39_RS03850 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U39_RS03880 SM00244 prohibitin homologues C2U39_RS03955 SM00091 PAS domain C2U39_RS03955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS03975 SM00382 ATPases associated with a variety of cellular activities C2U39_RS04030 SM00382 ATPases associated with a variety of cellular activities C2U39_RS04085 SM00487 DEAD-like helicases superfamily C2U39_RS04085 SM00490 helicase superfamily c-terminal domain C2U39_RS04085 SM00847 Helicase associated domain (HA2) Add an annotation C2U39_RS04120 SM00014 Acid phosphatase homologues C2U39_RS04215 SM00382 ATPases associated with a variety of cellular activities C2U39_RS04225 SM00448 cheY-homologous receiver domain C2U39_RS04240 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C2U39_RS04275 SM00327 von Willebrand factor (vWF) type A domain C2U39_RS04350 SM00422 helix_turn_helix, mercury resistance C2U39_RS04400 SM00382 ATPases associated with a variety of cellular activities C2U39_RS04405 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U39_RS04415 SM00260 Two component signalling adaptor domain C2U39_RS04415 SM00448 cheY-homologous receiver domain C2U39_RS04425 SM00382 ATPases associated with a variety of cellular activities C2U39_RS04440 SM00052 Putative diguanylate phosphodiesterase C2U39_RS04470 SM00450 Rhodanese Homology Domain C2U39_RS04525 SM00382 ATPases associated with a variety of cellular activities C2U39_RS04610 SM00267 diguanylate cyclase C2U39_RS04625 SM00052 Putative diguanylate phosphodiesterase C2U39_RS04625 SM00091 PAS domain C2U39_RS04625 SM00267 diguanylate cyclase C2U39_RS04660 SM00479 C2U39_RS04660 C2U39_RS04700 SM00357 Cold shock protein domain C2U39_RS04710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS04710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS04755 SM00495 Chitin-binding domain type 3 C2U39_RS04755 SM00636 C2U39_RS04755 C2U39_RS04760 SM00028 Tetratricopeptide repeats C2U39_RS04820 SM00382 ATPases associated with a variety of cellular activities C2U39_RS04825 SM00382 ATPases associated with a variety of cellular activities C2U39_RS04860 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase C2U39_RS04890 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C2U39_RS04900 SM01012 C2U39_RS04900 C2U39_RS04915 SM00382 ATPases associated with a variety of cellular activities C2U39_RS04940 SM01057 Eukaryotic-type carbonic anhydrase C2U39_RS04955 SM00477 DNA/RNA non-specific endonuclease C2U39_RS04955 SM00892 DNA/RNA non-specific endonuclease C2U39_RS04965 SM00852 Probable molybdopterin binding domain C2U39_RS04990 SM00382 ATPases associated with a variety of cellular activities C2U39_RS05035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS05035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS05045 SM00870 C2U39_RS05045 C2U39_RS05055 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2U39_RS05090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS05095 SM01266 C2U39_RS05095 C2U39_RS05110 SM00829 Enoylreductase C2U39_RS05135 SM00878 Biotin carboxylase C-terminal domain C2U39_RS05155 SM00052 Putative diguanylate phosphodiesterase C2U39_RS05155 SM00267 diguanylate cyclase C2U39_RS05160 SM00091 PAS domain C2U39_RS05235 SM00382 ATPases associated with a variety of cellular activities C2U39_RS05255 SM00861 Transketolase, pyrimidine binding domain C2U39_RS05290 SM01103 C2U39_RS05290 C2U39_RS05300 SM00382 ATPases associated with a variety of cellular activities C2U39_RS05340 SM00316 Ribosomal protein S1-like RNA-binding domain C2U39_RS05360 SM01387 C2U39_RS05360 C2U39_RS05365 SM00316 Ribosomal protein S1-like RNA-binding domain C2U39_RS05365 SM00322 K homology RNA-binding domain C2U39_RS05440 SM00422 helix_turn_helix, mercury resistance C2U39_RS05465 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U39_RS05480 SM00936 Penicillin-binding protein 5, C-terminal domain C2U39_RS05545 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U39_RS05545 SM01091 Transporter associated domain C2U39_RS05560 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U39_RS05590 SM00267 diguanylate cyclase C2U39_RS05600 SM00267 diguanylate cyclase C2U39_RS05630 SM00382 ATPases associated with a variety of cellular activities C2U39_RS05640 SM00841 Elongation factor P, C-terminal C2U39_RS05640 SM01185 C2U39_RS05640 C2U39_RS05650 SM01240 C2U39_RS05650 C2U39_RS05660 SM00387 Histidine kinase-like ATPases C2U39_RS05660 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS05665 SM00448 cheY-homologous receiver domain C2U39_RS05665 SM00862 Transcriptional regulatory protein, C terminal C2U39_RS05680 SM01236 C2U39_RS05680 C2U39_RS05735 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS05735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS05795 SM00849 Metallo-beta-lactamase superfamily C2U39_RS05815 SM00842 Cell division protein FtsA C2U39_RS05835 SM00965 Secretin and TonB N terminus short domain C2U39_RS05900 SM01150 C2U39_RS05900 C2U39_RS05930 SM01022 C2U39_RS05930 C2U39_RS06005 SM00487 DEAD-like helicases superfamily C2U39_RS06045 SM00382 ATPases associated with a variety of cellular activities C2U39_RS06045 SM01086 C-terminal, D2-small domain, of ClpB protein C2U39_RS06050 SM00155 Phospholipase D. Active site motifs. C2U39_RS06065 SM00052 Putative diguanylate phosphodiesterase C2U39_RS06065 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U39_RS06065 SM00091 PAS domain C2U39_RS06065 SM00267 diguanylate cyclase C2U39_RS06080 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C2U39_RS06125 SM00530 Helix-turn-helix XRE-family like proteins C2U39_RS06160 SM01400 C2U39_RS06160 C2U39_RS06185 SM00937 C2U39_RS06185 C2U39_RS06220 SM00986 Uracil DNA glycosylase superfamily C2U39_RS06220 SM00987 UreE urease accessory protein, C-terminal domain C2U39_RS06265 SM00732 Likely ribonuclease with RNase H fold. C2U39_RS06290 SM00731 SprT homologues. C2U39_RS06300 SM00861 Transketolase, pyrimidine binding domain C2U39_RS06340 SM00363 S4 RNA-binding domain C2U39_RS06345 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS06355 SM00788 Adenylosuccinate synthetase C2U39_RS06400 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C2U39_RS06400 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C2U39_RS06400 SM00493 C2U39_RS06400 C2U39_RS06410 SM00091 PAS domain C2U39_RS06410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS06430 SM00382 ATPases associated with a variety of cellular activities C2U39_RS06435 SM00382 ATPases associated with a variety of cellular activities C2U39_RS06455 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U39_RS06460 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U39_RS06465 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2U39_RS06510 SM00382 ATPases associated with a variety of cellular activities C2U39_RS06570 SM00382 ATPases associated with a variety of cellular activities C2U39_RS06570 SM00962 SRP54-type protein, GTPase domain C2U39_RS06585 SM00448 cheY-homologous receiver domain C2U39_RS06595 SM00073 Histidine Phosphotransfer domain C2U39_RS06595 SM00260 Two component signalling adaptor domain C2U39_RS06595 SM00387 Histidine kinase-like ATPases C2U39_RS06595 SM01231 C2U39_RS06595 C2U39_RS06600 SM00448 cheY-homologous receiver domain C2U39_RS06620 SM00260 Two component signalling adaptor domain C2U39_RS06625 SM00260 Two component signalling adaptor domain C2U39_RS06635 SM00382 ATPases associated with a variety of cellular activities C2U39_RS06820 SM00382 ATPases associated with a variety of cellular activities C2U39_RS06910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS06910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS06925 SM01091 Transporter associated domain C2U39_RS06990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS07000 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U39_RS07000 SM00876 Biotin and Thiamin Synthesis associated domain C2U39_RS07035 SM00890 Domain of unknown function C2U39_RS07180 SM01081 Putative carbohydrate binding domain C2U39_RS07235 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U39_RS07320 SM00052 Putative diguanylate phosphodiesterase C2U39_RS07320 SM00267 diguanylate cyclase C2U39_RS07325 SM01126 C2U39_RS07325 C2U39_RS07335 SM00354 helix_turn _helix lactose operon repressor C2U39_RS07360 SM00257 Lysin motif C2U39_RS07365 SM00849 Metallo-beta-lactamase superfamily C2U39_RS07380 SM00479 C2U39_RS07380 C2U39_RS07390 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U39_RS07420 SM00897 FIST N domain C2U39_RS07420 SM01204 C2U39_RS07420 C2U39_RS07425 SM00387 Histidine kinase-like ATPases C2U39_RS07425 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS07425 SM00448 cheY-homologous receiver domain C2U39_RS07430 SM00464 Found in ATP-dependent protease La (LON) C2U39_RS07440 SM00421 helix_turn_helix, Lux Regulon C2U39_RS07440 SM00448 cheY-homologous receiver domain C2U39_RS07445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS07445 SM00387 Histidine kinase-like ATPases C2U39_RS07450 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U39_RS07465 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C2U39_RS07490 SM00852 Probable molybdopterin binding domain C2U39_RS07520 SM00382 ATPases associated with a variety of cellular activities C2U39_RS07545 SM00852 Probable molybdopterin binding domain C2U39_RS07555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS07555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS07585 SM00867 YceI-like domain C2U39_RS07595 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C2U39_RS07605 SM00563 Phosphate acyltransferases C2U39_RS07635 SM00052 Putative diguanylate phosphodiesterase C2U39_RS07635 SM00267 diguanylate cyclase C2U39_RS07640 SM00855 Phosphoglycerate mutase family C2U39_RS07645 SM00507 HNH nucleases C2U39_RS07660 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C2U39_RS07665 SM00363 S4 RNA-binding domain C2U39_RS07685 SM00871 Bacterial transcription activator, effector binding domain C2U39_RS07710 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U39_RS07775 SM00420 helix_turn_helix, Deoxyribose operon repressor C2U39_RS07775 SM01134 C2U39_RS07775 C2U39_RS07795 SM00830 Chorismate mutase type II C2U39_RS07870 SM00382 ATPases associated with a variety of cellular activities C2U39_RS07935 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS07935 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C2U39_RS07950 SM00382 ATPases associated with a variety of cellular activities C2U39_RS07955 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS07955 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C2U39_RS07980 SM00052 Putative diguanylate phosphodiesterase C2U39_RS07980 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U39_RS07980 SM00091 PAS domain C2U39_RS07980 SM00267 diguanylate cyclase C2U39_RS07985 SM00450 Rhodanese Homology Domain C2U39_RS08015 SM01359 C2U39_RS08015 C2U39_RS08015 SM01360 C2U39_RS08015 C2U39_RS08030 SM00981 C2U39_RS08030 C2U39_RS08085 SM00858 C2U39_RS08085 C2U39_RS08150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS08150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS08160 SM00478 endonuclease III C2U39_RS08160 SM00525 C2U39_RS08160 C2U39_RS08170 SM00900 C2U39_RS08170 C2U39_RS08205 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U39_RS08205 SM00091 PAS domain C2U39_RS08205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS08245 SM00487 DEAD-like helicases superfamily C2U39_RS08245 SM00490 helicase superfamily c-terminal domain C2U39_RS08270 SM00448 cheY-homologous receiver domain C2U39_RS08270 SM00850 LytTr DNA-binding domain C2U39_RS08275 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2U39_RS08280 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U39_RS08310 SM00382 ATPases associated with a variety of cellular activities C2U39_RS08315 SM00382 ATPases associated with a variety of cellular activities C2U39_RS08325 SM01005 Alanine racemase, C-terminal domain C2U39_RS08365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS08365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS08415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS08415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS08545 SM00357 Cold shock protein domain C2U39_RS08560 SM00382 ATPases associated with a variety of cellular activities C2U39_RS08630 SM00460 Transglutaminase/protease-like homologues C2U39_RS08660 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS08745 SM00487 DEAD-like helicases superfamily C2U39_RS08750 SM00327 von Willebrand factor (vWF) type A domain C2U39_RS08755 SM00382 ATPases associated with a variety of cellular activities C2U39_RS08805 SM00671 Sel1-like repeats. C2U39_RS08855 SM00382 ATPases associated with a variety of cellular activities C2U39_RS08855 SM01086 C-terminal, D2-small domain, of ClpB protein C2U39_RS08860 SM00382 ATPases associated with a variety of cellular activities C2U39_RS08955 SM00382 ATPases associated with a variety of cellular activities C2U39_RS08960 SM00382 ATPases associated with a variety of cellular activities C2U39_RS09025 SM00493 C2U39_RS09025 C2U39_RS09030 SM00387 Histidine kinase-like ATPases C2U39_RS09055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS09055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS09055 SM01049 C2U39_RS09055 C2U39_RS09070 SM00052 Putative diguanylate phosphodiesterase C2U39_RS09070 SM00267 diguanylate cyclase C2U39_RS09105 SM00823 Phosphopantetheine attachment site C2U39_RS09110 SM00822 C2U39_RS09110 C2U39_RS09135 SM00382 ATPases associated with a variety of cellular activities C2U39_RS09180 SM00893 Electron transfer flavoprotein domain C2U39_RS09185 SM00893 Electron transfer flavoprotein domain C2U39_RS09345 SM00825 Beta-ketoacyl synthase C2U39_RS09385 SM00861 Transketolase, pyrimidine binding domain C2U39_RS09400 SM00881 CoA binding domain C2U39_RS09430 SM00873 B3/4 domain C2U39_RS09440 SM00859 Semialdehyde dehydrogenase, NAD binding domain C2U39_RS09445 SM00357 Cold shock protein domain C2U39_RS09455 SM00382 ATPases associated with a variety of cellular activities C2U39_RS09455 SM01086 C-terminal, D2-small domain, of ClpB protein C2U39_RS09460 SM00316 Ribosomal protein S1-like RNA-binding domain C2U39_RS09480 SM00267 diguanylate cyclase C2U39_RS09480 SM00448 cheY-homologous receiver domain C2U39_RS09490 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C2U39_RS09490 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C2U39_RS09495 SM00344 helix_turn_helix ASNC type C2U39_RS09500 SM00843 C2U39_RS09500 C2U39_RS09510 SM00382 ATPases associated with a variety of cellular activities C2U39_RS09540 SM00354 helix_turn _helix lactose operon repressor C2U39_RS09550 SM00382 ATPases associated with a variety of cellular activities C2U39_RS09555 SM00382 ATPases associated with a variety of cellular activities C2U39_RS09575 SM00382 ATPases associated with a variety of cellular activities C2U39_RS09615 SM00091 PAS domain C2U39_RS09615 SM00382 ATPases associated with a variety of cellular activities C2U39_RS09625 SM00267 diguanylate cyclase C2U39_RS09625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS09635 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U39_RS09665 SM00642 Alpha-amylase domain C2U39_RS09675 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U39_RS09675 SM01240 C2U39_RS09675 C2U39_RS09710 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS09730 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U39_RS09735 SM00364 Leucine-rich repeats, bacterial type C2U39_RS09735 SM00369 Leucine-rich repeats, typical (most populated) subfamily C2U39_RS09750 SM00855 Phosphoglycerate mutase family C2U39_RS09775 SM00487 DEAD-like helicases superfamily C2U39_RS09775 SM00490 helicase superfamily c-terminal domain C2U39_RS09775 SM00982 C2U39_RS09775 C2U39_RS09775 SM01058 CarD-like/TRCF domain C2U39_RS09790 SM00382 ATPases associated with a variety of cellular activities C2U39_RS09800 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U39_RS09825 SM00382 ATPases associated with a variety of cellular activities C2U39_RS09825 SM00994 ClpX C4-type zinc finger C2U39_RS09825 SM01086 C-terminal, D2-small domain, of ClpB protein C2U39_RS09830 SM00382 ATPases associated with a variety of cellular activities C2U39_RS09830 SM00464 Found in ATP-dependent protease La (LON) C2U39_RS09835 SM00411 bacterial (prokaryotic) histone like domain C2U39_RS09845 SM00382 ATPases associated with a variety of cellular activities C2U39_RS09860 SM00479 C2U39_RS09860 C2U39_RS09865 SM00100 Cyclic nucleotide-monophosphate binding domain C2U39_RS09865 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U39_RS09900 SM00422 helix_turn_helix, mercury resistance C2U39_RS09910 SM00878 Biotin carboxylase C-terminal domain C2U39_RS09910 SM01209 C2U39_RS09910 C2U39_RS09955 SM00822 C2U39_RS09955 C2U39_RS09990 SM00382 ATPases associated with a variety of cellular activities C2U39_RS10025 SM00267 diguanylate cyclase C2U39_RS10040 SM00822 C2U39_RS10040 C2U39_RS10050 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS10060 SM00518 AP endonuclease family 2 C2U39_RS10090 SM00090 RIO-like kinase C2U39_RS10100 SM00486 DNA polymerase type-B family C2U39_RS10335 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U39_RS10425 SM00422 helix_turn_helix, mercury resistance C2U39_RS10435 SM00052 Putative diguanylate phosphodiesterase C2U39_RS10465 SM00028 Tetratricopeptide repeats C2U39_RS10470 SM00327 von Willebrand factor (vWF) type A domain C2U39_RS10505 SM01322 C2U39_RS10505 C2U39_RS10520 SM00382 ATPases associated with a variety of cellular activities C2U39_RS10535 SM00237 Domains in Na-Ca exchangers and integrin-beta4 C2U39_RS10570 SM00073 Histidine Phosphotransfer domain C2U39_RS10570 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U39_RS10570 SM00091 PAS domain C2U39_RS10570 SM00387 Histidine kinase-like ATPases C2U39_RS10570 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS10570 SM00448 cheY-homologous receiver domain C2U39_RS10575 SM00091 PAS domain C2U39_RS10580 SM00448 cheY-homologous receiver domain C2U39_RS10580 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U39_RS10620 SM00491 C2U39_RS10620 C2U39_RS10645 SM00341 Helicase and RNase D C-terminal C2U39_RS10645 SM00474 3'-5' exonuclease C2U39_RS10660 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS10680 SM00382 ATPases associated with a variety of cellular activities C2U39_RS10710 SM01126 C2U39_RS10710 C2U39_RS10740 SM00421 helix_turn_helix, Lux Regulon C2U39_RS10745 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U39_RS10750 SM00382 ATPases associated with a variety of cellular activities C2U39_RS10750 SM00487 DEAD-like helicases superfamily C2U39_RS10750 SM00490 helicase superfamily c-terminal domain C2U39_RS10750 SM00847 Helicase associated domain (HA2) Add an annotation C2U39_RS10765 SM00387 Histidine kinase-like ATPases C2U39_RS10765 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS10765 SM00448 cheY-homologous receiver domain C2U39_RS10770 SM00448 cheY-homologous receiver domain C2U39_RS10770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U39_RS10775 SM00849 Metallo-beta-lactamase superfamily C2U39_RS10780 SM00450 Rhodanese Homology Domain C2U39_RS10800 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase C2U39_RS10805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS10815 SM00880 C2U39_RS10815 C2U39_RS10850 SM00857 Resolvase, N terminal domain C2U39_RS10855 SM00857 Resolvase, N terminal domain C2U39_RS10870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS10870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS10880 SM00316 Ribosomal protein S1-like RNA-binding domain C2U39_RS10885 SM00363 S4 RNA-binding domain C2U39_RS10920 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. C2U39_RS10925 SM00822 C2U39_RS10925 C2U39_RS10935 SM00825 Beta-ketoacyl synthase C2U39_RS10955 SM00382 ATPases associated with a variety of cellular activities C2U39_RS11030 SM00382 ATPases associated with a variety of cellular activities C2U39_RS11040 SM00981 C2U39_RS11040 C2U39_RS11070 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C2U39_RS11070 SM00245 tail specific protease C2U39_RS11075 SM00945 ProQ/FINO family C2U39_RS11130 SM00100 Cyclic nucleotide-monophosphate binding domain C2U39_RS11130 SM00419 helix_turn_helix, cAMP Regulatory protein C2U39_RS11165 SM00382 ATPases associated with a variety of cellular activities C2U39_RS11185 SM00354 helix_turn _helix lactose operon repressor C2U39_RS11190 SM00267 diguanylate cyclase C2U39_RS11215 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS11215 SM00387 Histidine kinase-like ATPases C2U39_RS11215 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS11215 SM00448 cheY-homologous receiver domain C2U39_RS11220 SM00411 bacterial (prokaryotic) histone like domain C2U39_RS11225 SM00873 B3/4 domain C2U39_RS11225 SM00874 tRNA synthetase B5 domain C2U39_RS11225 SM00896 Ferredoxin-fold anticodon binding domain C2U39_RS11255 SM01022 C2U39_RS11255 C2U39_RS11265 SM00530 Helix-turn-helix XRE-family like proteins C2U39_RS11295 SM00530 Helix-turn-helix XRE-family like proteins C2U39_RS11465 SM00530 Helix-turn-helix XRE-family like proteins C2U39_RS11490 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C2U39_RS11500 SM00671 Sel1-like repeats. C2U39_RS11510 SM00434 DNA Topoisomerase IV C2U39_RS11540 SM00925 MltA specific insert domain C2U39_RS11565 SM00354 helix_turn _helix lactose operon repressor C2U39_RS11580 SM00953 C2U39_RS11580 C2U39_RS11585 SM00487 DEAD-like helicases superfamily C2U39_RS11585 SM00490 helicase superfamily c-terminal domain C2U39_RS11590 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS11605 SM00463 Small MutS-related domain C2U39_RS11630 SM00495 Chitin-binding domain type 3 C2U39_RS11640 SM00782 PhnA Zinc-Ribbon C2U39_RS11665 SM00855 Phosphoglycerate mutase family C2U39_RS11675 SM01133 C2U39_RS11675 C2U39_RS11820 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS11840 SM01144 C2U39_RS11840 C2U39_RS11850 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. C2U39_RS11860 SM00487 DEAD-like helicases superfamily C2U39_RS11860 SM00490 helicase superfamily c-terminal domain C2U39_RS11950 SM00382 ATPases associated with a variety of cellular activities C2U39_RS11955 SM00382 ATPases associated with a variety of cellular activities C2U39_RS11960 SM00387 Histidine kinase-like ATPases C2U39_RS11960 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS11960 SM00448 cheY-homologous receiver domain C2U39_RS12020 SM00487 DEAD-like helicases superfamily C2U39_RS12020 SM00490 helicase superfamily c-terminal domain C2U39_RS12025 SM00763 PrkA AAA domain C2U39_RS12040 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U39_RS12065 SM00487 DEAD-like helicases superfamily C2U39_RS12065 SM00490 helicase superfamily c-terminal domain C2U39_RS12085 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS12105 SM00448 cheY-homologous receiver domain C2U39_RS12110 SM00387 Histidine kinase-like ATPases C2U39_RS12120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS12120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS12120 SM01049 C2U39_RS12120 C2U39_RS12210 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U39_RS12240 SM00267 diguanylate cyclase C2U39_RS12245 SM00052 Putative diguanylate phosphodiesterase C2U39_RS12250 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS12250 SM00871 Bacterial transcription activator, effector binding domain C2U39_RS12300 SM00420 helix_turn_helix, Deoxyribose operon repressor C2U39_RS12300 SM01134 C2U39_RS12300 C2U39_RS12330 SM01154 C2U39_RS12330 C2U39_RS12345 SM00528 Domain in histone-like proteins of HNS family C2U39_RS12370 SM01144 C2U39_RS12370 C2U39_RS12380 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C2U39_RS12385 SM00028 Tetratricopeptide repeats C2U39_RS12395 SM00411 bacterial (prokaryotic) histone like domain C2U39_RS12400 SM00316 Ribosomal protein S1-like RNA-binding domain C2U39_RS12445 SM00052 Putative diguanylate phosphodiesterase C2U39_RS12445 SM00267 diguanylate cyclase C2U39_RS12460 SM00448 cheY-homologous receiver domain C2U39_RS12465 SM00091 PAS domain C2U39_RS12490 SM00360 RNA recognition motif C2U39_RS12555 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C2U39_RS12560 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C2U39_RS12560 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C2U39_RS12600 SM01211 C2U39_RS12600 C2U39_RS12605 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS12620 SM00564 beta-propeller repeat C2U39_RS12640 SM00530 Helix-turn-helix XRE-family like proteins C2U39_RS12645 SM00028 Tetratricopeptide repeats C2U39_RS12655 SM00562 C2U39_RS12655 C2U39_RS12680 SM00271 DnaJ molecular chaperone homology domain C2U39_RS12725 SM00028 Tetratricopeptide repeats C2U39_RS12730 SM00450 Rhodanese Homology Domain C2U39_RS12745 SM01323 C2U39_RS12745 C2U39_RS12760 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U39_RS12845 SM00382 ATPases associated with a variety of cellular activities C2U39_RS12890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS12895 SM00479 C2U39_RS12895 C2U39_RS12915 SM00052 Putative diguanylate phosphodiesterase C2U39_RS12915 SM00267 diguanylate cyclase C2U39_RS12925 SM00487 DEAD-like helicases superfamily C2U39_RS12925 SM00490 helicase superfamily c-terminal domain C2U39_RS12950 SM01091 Transporter associated domain C2U39_RS12960 SM00829 Enoylreductase C2U39_RS13025 SM00267 diguanylate cyclase C2U39_RS13030 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U39_RS13030 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS13030 SM00397 Helical region found in SNAREs C2U39_RS13045 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS13070 SM00882 Coenzyme A transferase C2U39_RS13075 SM00882 Coenzyme A transferase C2U39_RS13105 SM00829 Enoylreductase C2U39_RS13145 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS13190 SM00859 Semialdehyde dehydrogenase, NAD binding domain C2U39_RS13200 SM00014 Acid phosphatase homologues C2U39_RS13225 SM00382 ATPases associated with a variety of cellular activities C2U39_RS13230 SM00267 diguanylate cyclase C2U39_RS13235 SM00052 Putative diguanylate phosphodiesterase C2U39_RS13310 SM00052 Putative diguanylate phosphodiesterase C2U39_RS13310 SM00267 diguanylate cyclase C2U39_RS13330 SM00382 ATPases associated with a variety of cellular activities C2U39_RS13335 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U39_RS13365 SM01351 C2U39_RS13365 C2U39_RS13375 SM00487 DEAD-like helicases superfamily C2U39_RS13375 SM00490 helicase superfamily c-terminal domain C2U39_RS13415 SM00267 diguanylate cyclase C2U39_RS13420 SM00917 LeuA allosteric (dimerisation) domain C2U39_RS13425 SM00851 MGS-like domain C2U39_RS13425 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C2U39_RS13430 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain C2U39_RS13470 SM00382 ATPases associated with a variety of cellular activities C2U39_RS13480 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS13490 SM00382 ATPases associated with a variety of cellular activities C2U39_RS13505 SM00899 C2U39_RS13505 C2U39_RS13535 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS13550 SM00267 diguanylate cyclase C2U39_RS13580 SM00840 C2U39_RS13580 C2U39_RS13610 SM00829 Enoylreductase C2U39_RS13615 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U39_RS13615 SM00091 PAS domain C2U39_RS13615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS13825 SM00487 DEAD-like helicases superfamily C2U39_RS13925 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C2U39_RS13925 SM00465 GIY-YIG type nucleases (URI domain) C2U39_RS13930 SM00421 helix_turn_helix, Lux Regulon C2U39_RS13930 SM00448 cheY-homologous receiver domain C2U39_RS13950 SM00382 ATPases associated with a variety of cellular activities C2U39_RS13955 SM00849 Metallo-beta-lactamase superfamily C2U39_RS13990 SM00491 C2U39_RS13990 C2U39_RS14015 SM00098 Alkaline phosphatase homologues C2U39_RS14020 SM00098 Alkaline phosphatase homologues C2U39_RS14040 SM00267 diguanylate cyclase C2U39_RS14045 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS14045 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C2U39_RS14055 SM00382 ATPases associated with a variety of cellular activities C2U39_RS14085 SM01091 Transporter associated domain C2U39_RS14095 SM00382 ATPases associated with a variety of cellular activities C2U39_RS14165 SM00382 ATPases associated with a variety of cellular activities C2U39_RS14165 SM00448 cheY-homologous receiver domain C2U39_RS14170 SM00091 PAS domain C2U39_RS14170 SM00387 Histidine kinase-like ATPases C2U39_RS14170 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS14175 SM00382 ATPases associated with a variety of cellular activities C2U39_RS14200 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U39_RS14200 SM00924 MgtE intracellular N domain C2U39_RS14215 SM00047 Lysozyme subfamily 2 C2U39_RS14260 SM00138 Methyltransferase, chemotaxis proteins C2U39_RS14265 SM00260 Two component signalling adaptor domain C2U39_RS14265 SM00448 cheY-homologous receiver domain C2U39_RS14270 SM00858 C2U39_RS14270 C2U39_RS14300 SM00363 S4 RNA-binding domain C2U39_RS14305 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U39_RS14345 SM00357 Cold shock protein domain C2U39_RS14355 SM00861 Transketolase, pyrimidine binding domain C2U39_RS14380 SM00487 DEAD-like helicases superfamily C2U39_RS14380 SM00490 helicase superfamily c-terminal domain C2U39_RS14400 SM00984 UDP binding domain C2U39_RS14480 SM00448 cheY-homologous receiver domain C2U39_RS14480 SM00862 Transcriptional regulatory protein, C terminal C2U39_RS14485 SM00387 Histidine kinase-like ATPases C2U39_RS14525 SM00481 DNA polymerase alpha chain like domain C2U39_RS14585 SM00363 S4 RNA-binding domain C2U39_RS14605 SM00481 DNA polymerase alpha chain like domain C2U39_RS14735 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS14740 SM00382 ATPases associated with a variety of cellular activities C2U39_RS14820 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U39_RS14850 SM00028 Tetratricopeptide repeats C2U39_RS14850 SM00448 cheY-homologous receiver domain C2U39_RS14920 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2U39_RS14945 SM00354 helix_turn _helix lactose operon repressor C2U39_RS14950 SM00640 Glycosyl hydrolases family 32 C2U39_RS14970 SM00271 DnaJ molecular chaperone homology domain C2U39_RS14990 SM00267 diguanylate cyclase C2U39_RS15010 SM00382 ATPases associated with a variety of cellular activities C2U39_RS15030 SM00528 Domain in histone-like proteins of HNS family C2U39_RS15050 SM01329 C2U39_RS15050 C2U39_RS15110 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. C2U39_RS15150 SM00919 Malic enzyme, NAD binding domain C2U39_RS15150 SM01274 C2U39_RS15150 C2U39_RS15170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U39_RS15180 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U39_RS15180 SM00091 PAS domain C2U39_RS15180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS15305 SM00448 cheY-homologous receiver domain C2U39_RS15305 SM00862 Transcriptional regulatory protein, C terminal C2U39_RS15370 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C2U39_RS15370 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C2U39_RS15370 SM00493 C2U39_RS15370 C2U39_RS15435 SM00487 DEAD-like helicases superfamily C2U39_RS15495 SM00530 Helix-turn-helix XRE-family like proteins C2U39_RS15640 SM00487 DEAD-like helicases superfamily C2U39_RS15640 SM00490 helicase superfamily c-terminal domain C2U39_RS15685 SM00530 Helix-turn-helix XRE-family like proteins C2U39_RS15705 SM00382 ATPases associated with a variety of cellular activities C2U39_RS15710 SM00382 ATPases associated with a variety of cellular activities C2U39_RS15745 SM00382 ATPases associated with a variety of cellular activities C2U39_RS15810 SM00382 ATPases associated with a variety of cellular activities C2U39_RS15845 SM00530 Helix-turn-helix XRE-family like proteins C2U39_RS15890 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS15890 SM00091 PAS domain C2U39_RS15890 SM00387 Histidine kinase-like ATPases C2U39_RS15890 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS15890 SM00448 cheY-homologous receiver domain C2U39_RS15915 SM00091 PAS domain C2U39_RS15915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS15915 SM00387 Histidine kinase-like ATPases C2U39_RS15915 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS15915 SM00448 cheY-homologous receiver domain C2U39_RS15980 SM00155 Phospholipase D. Active site motifs. C2U39_RS16035 SM01321 C2U39_RS16035 C2U39_RS16050 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U39_RS16065 SM00267 diguanylate cyclase C2U39_RS16080 SM00530 Helix-turn-helix XRE-family like proteins C2U39_RS16105 SM00919 Malic enzyme, NAD binding domain C2U39_RS16105 SM01274 C2U39_RS16105 C2U39_RS16110 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS16125 SM00267 diguanylate cyclase C2U39_RS16170 SM00382 ATPases associated with a variety of cellular activities C2U39_RS16185 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS16200 SM00382 ATPases associated with a variety of cellular activities C2U39_RS16240 SM00091 PAS domain C2U39_RS16240 SM00387 Histidine kinase-like ATPases C2U39_RS16240 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS16245 SM00448 cheY-homologous receiver domain C2U39_RS16245 SM00862 Transcriptional regulatory protein, C terminal C2U39_RS16255 SM00267 diguanylate cyclase C2U39_RS16260 SM00382 ATPases associated with a variety of cellular activities C2U39_RS16270 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS16290 SM00448 cheY-homologous receiver domain C2U39_RS16295 SM00387 Histidine kinase-like ATPases C2U39_RS16300 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U39_RS16345 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C2U39_RS16345 SM00292 breast cancer carboxy-terminal domain C2U39_RS16345 SM00532 Ligase N family C2U39_RS16350 SM00771 ZipA, C-terminal domain (FtsZ-binding) C2U39_RS16385 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS16410 SM00642 Alpha-amylase domain C2U39_RS16420 SM00421 helix_turn_helix, Lux Regulon C2U39_RS16420 SM00448 cheY-homologous receiver domain C2U39_RS16455 SM00267 diguanylate cyclase C2U39_RS16460 SM00977 TilS substrate C-terminal domain C2U39_RS16475 SM00382 ATPases associated with a variety of cellular activities C2U39_RS16510 SM00481 DNA polymerase alpha chain like domain C2U39_RS16540 SM00935 Outer membrane protein (OmpH-like) C2U39_RS16550 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C2U39_RS16595 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U39_RS16680 SM00028 Tetratricopeptide repeats C2U39_RS16685 SM00267 diguanylate cyclase C2U39_RS16695 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C2U39_RS16695 SM00475 5'-3' exonuclease C2U39_RS16700 SM01329 C2U39_RS16700 C2U39_RS16730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS16730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS16770 SM00900 C2U39_RS16770 C2U39_RS16885 SM00421 helix_turn_helix, Lux Regulon C2U39_RS16895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS16895 SM00387 Histidine kinase-like ATPases C2U39_RS16895 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS16900 SM00448 cheY-homologous receiver domain C2U39_RS16900 SM00862 Transcriptional regulatory protein, C terminal C2U39_RS16930 SM00354 helix_turn _helix lactose operon repressor C2U39_RS16940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS16940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS17060 SM00422 helix_turn_helix, mercury resistance C2U39_RS17090 SM00830 Chorismate mutase type II C2U39_RS17130 SM00530 Helix-turn-helix XRE-family like proteins C2U39_RS17210 SM00487 DEAD-like helicases superfamily C2U39_RS17210 SM00490 helicase superfamily c-terminal domain C2U39_RS17275 SM00420 helix_turn_helix, Deoxyribose operon repressor C2U39_RS17275 SM01134 C2U39_RS17275 C2U39_RS17290 SM01007 Class II Aldolase and Adducin N-terminal domain C2U39_RS17315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS17315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS17355 SM00463 Small MutS-related domain C2U39_RS17365 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS17365 SM00478 endonuclease III C2U39_RS17365 SM01009 AlkA N-terminal domain C2U39_RS17430 SM00052 Putative diguanylate phosphodiesterase C2U39_RS17440 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C2U39_RS17455 SM00387 Histidine kinase-like ATPases C2U39_RS17455 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS17460 SM00421 helix_turn_helix, Lux Regulon C2U39_RS17460 SM00448 cheY-homologous receiver domain C2U39_RS17480 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U39_RS17500 SM01005 Alanine racemase, C-terminal domain C2U39_RS17505 SM00382 ATPases associated with a variety of cellular activities C2U39_RS17510 SM00978 C2U39_RS17510 C2U39_RS17540 SM00028 Tetratricopeptide repeats C2U39_RS17545 SM00382 ATPases associated with a variety of cellular activities C2U39_RS17545 SM00448 cheY-homologous receiver domain C2U39_RS17555 SM00320 WD40 repeats C2U39_RS17580 SM00260 Two component signalling adaptor domain C2U39_RS17580 SM00448 cheY-homologous receiver domain C2U39_RS17590 SM00267 diguanylate cyclase C2U39_RS17620 SM00100 Cyclic nucleotide-monophosphate binding domain C2U39_RS17620 SM00419 helix_turn_helix, cAMP Regulatory protein C2U39_RS17630 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins C2U39_RS17630 SM00495 Chitin-binding domain type 3 C2U39_RS17630 SM00636 C2U39_RS17630 C2U39_RS17635 SM00387 Histidine kinase-like ATPases C2U39_RS17635 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS17635 SM00448 cheY-homologous receiver domain C2U39_RS17685 SM00382 ATPases associated with a variety of cellular activities C2U39_RS17695 SM00984 UDP binding domain C2U39_RS17710 SM01259 C2U39_RS17710 C2U39_RS17725 SM00382 ATPases associated with a variety of cellular activities C2U39_RS17740 SM00271 DnaJ molecular chaperone homology domain C2U39_RS17770 SM00650 Ribosomal RNA adenine dimethylases C2U39_RS17785 SM00530 Helix-turn-helix XRE-family like proteins C2U39_RS17795 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U39_RS17830 SM00244 prohibitin homologues C2U39_RS17835 SM00244 prohibitin homologues C2U39_RS17855 SM00853 MutL C terminal dimerisation domain C2U39_RS17855 SM01340 C2U39_RS17855 C2U39_RS17860 SM00257 Lysin motif C2U39_RS17860 SM00646 C2U39_RS17860 C2U39_RS17890 SM00382 ATPases associated with a variety of cellular activities C2U39_RS17890 SM00930 C2U39_RS17890 C2U39_RS17905 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C2U39_RS17910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS17910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS17915 SM00052 Putative diguanylate phosphodiesterase C2U39_RS17915 SM00448 cheY-homologous receiver domain C2U39_RS17920 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS17920 SM00073 Histidine Phosphotransfer domain C2U39_RS17920 SM00387 Histidine kinase-like ATPases C2U39_RS17920 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS17920 SM00448 cheY-homologous receiver domain C2U39_RS17930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U39_RS17935 SM00073 Histidine Phosphotransfer domain C2U39_RS17935 SM00091 PAS domain C2U39_RS17935 SM00387 Histidine kinase-like ATPases C2U39_RS17935 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS17935 SM00448 cheY-homologous receiver domain C2U39_RS17980 SM01130 C2U39_RS17980 C2U39_RS18035 SM00014 Acid phosphatase homologues C2U39_RS18045 SM00917 LeuA allosteric (dimerisation) domain C2U39_RS18050 SM01329 C2U39_RS18050 C2U39_RS18085 SM00382 ATPases associated with a variety of cellular activities C2U39_RS18090 SM00670 Large family of predicted nucleotide-binding domains C2U39_RS18155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS18155 SM00387 Histidine kinase-like ATPases C2U39_RS18155 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS18160 SM00448 cheY-homologous receiver domain C2U39_RS18160 SM00862 Transcriptional regulatory protein, C terminal C2U39_RS18170 SM00382 ATPases associated with a variety of cellular activities C2U39_RS18215 SM00267 diguanylate cyclase C2U39_RS18225 SM00487 DEAD-like helicases superfamily C2U39_RS18225 SM00490 helicase superfamily c-terminal domain C2U39_RS18235 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS18320 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U39_RS18345 SM00028 Tetratricopeptide repeats C2U39_RS18345 SM00267 diguanylate cyclase C2U39_RS18350 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U39_RS18350 SM00267 diguanylate cyclase C2U39_RS18355 SM00327 von Willebrand factor (vWF) type A domain C2U39_RS18360 SM00382 ATPases associated with a variety of cellular activities C2U39_RS18405 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U39_RS18455 SM00344 helix_turn_helix ASNC type C2U39_RS18470 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U39_RS18475 SM00829 Enoylreductase C2U39_RS18490 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS18490 SM00871 Bacterial transcription activator, effector binding domain C2U39_RS18500 SM00642 Alpha-amylase domain C2U39_RS18505 SM00642 Alpha-amylase domain C2U39_RS18515 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2U39_RS18530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS18530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS18660 SM00382 ATPases associated with a variety of cellular activities C2U39_RS18665 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C2U39_RS18670 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS18670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS18680 SM00479 C2U39_RS18680 C2U39_RS18685 SM00822 C2U39_RS18685 C2U39_RS18725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS18730 SM00487 DEAD-like helicases superfamily C2U39_RS18730 SM00490 helicase superfamily c-terminal domain C2U39_RS18765 SM00028 Tetratricopeptide repeats C2U39_RS18845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS18845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS18845 SM01049 C2U39_RS18845 C2U39_RS18860 SM00382 ATPases associated with a variety of cellular activities C2U39_RS18915 SM00487 DEAD-like helicases superfamily C2U39_RS18915 SM00490 helicase superfamily c-terminal domain C2U39_RS18930 SM00052 Putative diguanylate phosphodiesterase C2U39_RS18930 SM00267 diguanylate cyclase C2U39_RS18945 SM00883 Chaperonin 10 Kd subunit C2U39_RS18985 SM00829 Enoylreductase C2U39_RS19055 SM00967 RNA 2'-O ribose methyltransferase substrate binding C2U39_RS19060 SM00316 Ribosomal protein S1-like RNA-binding domain C2U39_RS19060 SM00357 Cold shock protein domain C2U39_RS19060 SM00955 C2U39_RS19060 C2U39_RS19065 SM00267 diguanylate cyclase C2U39_RS19080 SM00938 Nitrogen regulatory protein P-II C2U39_RS19165 SM00904 Riboflavin kinase C2U39_RS19180 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2U39_RS19210 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2U39_RS19220 SM00927 DNA mismatch repair enzyme MutH C2U39_RS19250 SM00382 ATPases associated with a variety of cellular activities C2U39_RS19250 SM00962 SRP54-type protein, GTPase domain C2U39_RS19250 SM00963 SRP54-type protein, helical bundle domain C2U39_RS19260 SM01091 Transporter associated domain C2U39_RS19275 SM00671 Sel1-like repeats. C2U39_RS19300 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS19300 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C2U39_RS19305 SM00382 ATPases associated with a variety of cellular activities C2U39_RS19320 SM00382 ATPases associated with a variety of cellular activities C2U39_RS19335 SM00938 Nitrogen regulatory protein P-II C2U39_RS19405 SM01152 C2U39_RS19405 C2U39_RS19425 SM00382 ATPases associated with a variety of cellular activities C2U39_RS19440 SM00487 DEAD-like helicases superfamily C2U39_RS19440 SM00490 helicase superfamily c-terminal domain C2U39_RS19485 SM00411 bacterial (prokaryotic) histone like domain C2U39_RS19500 SM00382 ATPases associated with a variety of cellular activities C2U39_RS19525 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2U39_RS19525 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U39_RS19525 SM00091 PAS domain C2U39_RS19525 SM00267 diguanylate cyclase C2U39_RS19545 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain C2U39_RS19550 SM01133 C2U39_RS19550 C2U39_RS19630 SM01091 Transporter associated domain C2U39_RS19685 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C2U39_RS19695 SM00382 ATPases associated with a variety of cellular activities C2U39_RS19710 SM00533 DNA-binding domain of DNA mismatch repair MUTS family C2U39_RS19710 SM00534 ATPase domain of DNA mismatch repair MUTS family C2U39_RS19725 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U39_RS19765 SM00382 ATPases associated with a variety of cellular activities C2U39_RS19785 SM00986 Uracil DNA glycosylase superfamily C2U39_RS19785 SM00987 UreE urease accessory protein, C-terminal domain C2U39_RS19795 SM00465 GIY-YIG type nucleases (URI domain) C2U39_RS19815 SM00563 Phosphate acyltransferases C2U39_RS19845 SM00271 DnaJ molecular chaperone homology domain C2U39_RS19975 SM00530 Helix-turn-helix XRE-family like proteins C2U39_RS19980 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U39_RS19980 SM00866 C2U39_RS19980 C2U39_RS20005 SM00382 ATPases associated with a variety of cellular activities C2U39_RS20015 SM00267 diguanylate cyclase C2U39_RS20030 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS20030 SM00871 Bacterial transcription activator, effector binding domain C2U39_RS20040 SM01060 C2U39_RS20040 C2U39_RS20060 SM00014 Acid phosphatase homologues C2U39_RS20070 SM00822 C2U39_RS20070 C2U39_RS20100 SM00091 PAS domain C2U39_RS20110 SM01120 C2U39_RS20110 C2U39_RS20165 SM00838 Elongation factor G C-terminus C2U39_RS20165 SM00889 Elongation factor G, domain IV C2U39_RS20205 SM00663 RNA polymerase I subunit A N-terminus C2U39_RS20230 SM00649 Ribosomal protein L11/L12 C2U39_RS20235 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C2U39_RS20235 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C2U39_RS20290 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C2U39_RS20290 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C2U39_RS20290 SM00493 C2U39_RS20290 C2U39_RS20310 SM00387 Histidine kinase-like ATPases C2U39_RS20315 SM00448 cheY-homologous receiver domain C2U39_RS20315 SM00862 Transcriptional regulatory protein, C terminal C2U39_RS20350 SM00382 ATPases associated with a variety of cellular activities C2U39_RS20350 SM00448 cheY-homologous receiver domain C2U39_RS20360 SM00387 Histidine kinase-like ATPases C2U39_RS20360 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS20380 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U39_RS20385 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS20390 SM00344 helix_turn_helix ASNC type C2U39_RS20405 SM00382 ATPases associated with a variety of cellular activities C2U39_RS20405 SM01086 C-terminal, D2-small domain, of ClpB protein C2U39_RS20415 SM00363 S4 RNA-binding domain C2U39_RS20440 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C2U39_RS20440 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C2U39_RS20450 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS20470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS20470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS20540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U39_RS20540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS20550 SM00382 ATPases associated with a variety of cellular activities C2U39_RS20560 SM01038 Beta galactosidase small chain C2U39_RS20565 SM00354 helix_turn _helix lactose operon repressor C2U39_RS20610 SM00464 Found in ATP-dependent protease La (LON) C2U39_RS20615 SM00836 DALR anticodon binding domain C2U39_RS20615 SM01016 Arginyl tRNA synthetase N terminal dom C2U39_RS20630 SM00382 ATPases associated with a variety of cellular activities C2U39_RS20630 SM01086 C-terminal, D2-small domain, of ClpB protein C2U39_RS20655 SM00382 ATPases associated with a variety of cellular activities C2U39_RS20690 SM00924 MgtE intracellular N domain C2U39_RS20720 SM00341 Helicase and RNase D C-terminal C2U39_RS20720 SM00487 DEAD-like helicases superfamily C2U39_RS20720 SM00490 helicase superfamily c-terminal domain C2U39_RS20720 SM00956 C2U39_RS20720 C2U39_RS20755 SM00382 ATPases associated with a variety of cellular activities C2U39_RS20775 SM01230 C2U39_RS20775 C2U39_RS20820 SM00642 Alpha-amylase domain C2U39_RS20840 SM00448 cheY-homologous receiver domain C2U39_RS20840 SM00862 Transcriptional regulatory protein, C terminal C2U39_RS20850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS20850 SM00387 Histidine kinase-like ATPases C2U39_RS20850 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS20860 SM00919 Malic enzyme, NAD binding domain C2U39_RS20860 SM01274 C2U39_RS20860 C2U39_RS20875 SM00487 DEAD-like helicases superfamily C2U39_RS20875 SM00490 helicase superfamily c-terminal domain C2U39_RS20925 SM00382 ATPases associated with a variety of cellular activities C2U39_RS20930 SM00563 Phosphate acyltransferases C2U39_RS20935 SM00563 Phosphate acyltransferases C2U39_RS20980 SM00267 diguanylate cyclase C2U39_RS20985 SM00422 helix_turn_helix, mercury resistance C2U39_RS21045 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain C2U39_RS21045 SM01232 C2U39_RS21045 C2U39_RS21125 SM00881 CoA binding domain C2U39_RS21155 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C2U39_RS21155 SM00474 3'-5' exonuclease C2U39_RS21155 SM00475 5'-3' exonuclease C2U39_RS21155 SM00482 DNA polymerase A domain C2U39_RS21175 SM00971 Serine acetyltransferase, N-terminal C2U39_RS21185 SM00448 cheY-homologous receiver domain C2U39_RS21185 SM00862 Transcriptional regulatory protein, C terminal C2U39_RS21190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS21190 SM00387 Histidine kinase-like ATPases C2U39_RS21190 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS21220 SM00563 Phosphate acyltransferases C2U39_RS21255 SM00354 helix_turn _helix lactose operon repressor C2U39_RS21320 SM00829 Enoylreductase C2U39_RS21330 SM00052 Putative diguanylate phosphodiesterase C2U39_RS21330 SM00267 diguanylate cyclase C2U39_RS21415 SM00448 cheY-homologous receiver domain C2U39_RS21415 SM00862 Transcriptional regulatory protein, C terminal C2U39_RS21420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS21420 SM00387 Histidine kinase-like ATPases C2U39_RS21420 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS21495 SM00836 DALR anticodon binding domain C2U39_RS21510 SM00052 Putative diguanylate phosphodiesterase C2U39_RS21570 SM00849 Metallo-beta-lactamase superfamily C2U39_RS21575 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2U39_RS21575 SM00382 ATPases associated with a variety of cellular activities C2U39_RS21580 SM00354 helix_turn _helix lactose operon repressor C2U39_RS21600 SM00382 ATPases associated with a variety of cellular activities C2U39_RS21605 SM00382 ATPases associated with a variety of cellular activities C2U39_RS21610 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS21620 SM00450 Rhodanese Homology Domain C2U39_RS21655 SM00357 Cold shock protein domain C2U39_RS21655 SM00382 ATPases associated with a variety of cellular activities C2U39_RS21655 SM00959 Rho termination factor, N-terminal domain C2U39_RS21665 SM00487 DEAD-like helicases superfamily C2U39_RS21665 SM00490 helicase superfamily c-terminal domain C2U39_RS21685 SM00052 Putative diguanylate phosphodiesterase C2U39_RS21685 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2U39_RS21685 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U39_RS21685 SM00091 PAS domain C2U39_RS21685 SM00267 diguanylate cyclase C2U39_RS21695 SM01004 Delta-aminolevulinic acid dehydratase C2U39_RS21805 SM00421 helix_turn_helix, Lux Regulon C2U39_RS21815 SM00420 helix_turn_helix, Deoxyribose operon repressor C2U39_RS21815 SM01134 C2U39_RS21815 C2U39_RS21820 SM00448 cheY-homologous receiver domain C2U39_RS21820 SM00862 Transcriptional regulatory protein, C terminal C2U39_RS21825 SM00387 Histidine kinase-like ATPases C2U39_RS21825 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS21850 SM00382 ATPases associated with a variety of cellular activities C2U39_RS21890 SM00470 ParB-like nuclease domain C2U39_RS21905 SM01228 C2U39_RS21905 C2U39_RS21920 SM00382 ATPases associated with a variety of cellular activities C2U39_RS21925 SM00382 ATPases associated with a variety of cellular activities C2U39_RS21960 SM00487 DEAD-like helicases superfamily C2U39_RS22010 SM00530 Helix-turn-helix XRE-family like proteins C2U39_RS22120 SM00857 Resolvase, N terminal domain C2U39_RS22130 SM00487 DEAD-like helicases superfamily C2U39_RS22195 SM01234 C2U39_RS22195 C2U39_RS22210 SM00382 ATPases associated with a variety of cellular activities C2U39_RS22220 SM00062 Bacterial periplasmic substrate-binding proteins C2U39_RS22225 SM00382 ATPases associated with a variety of cellular activities C2U39_RS22225 SM00760 Bacterial dnaA protein helix-turn-helix domain C2U39_RS22230 SM00480 DNA polymerase III beta subunit C2U39_RS22240 SM00387 Histidine kinase-like ATPases C2U39_RS22240 SM00433 TopoisomeraseII C2U39_RS22245 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS22280 SM00342 helix_turn_helix, arabinose operon control protein C2U39_RS22290 SM00448 cheY-homologous receiver domain C2U39_RS22290 SM00862 Transcriptional regulatory protein, C terminal C2U39_RS22295 SM00387 Histidine kinase-like ATPases C2U39_RS22295 SM00388 His Kinase A (phosphoacceptor) domain C2U39_RS22325 SM00091 PAS domain C2U39_RS22325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U39_RS22325 SM00387 Histidine kinase-like ATPases C2U39_RS22370 SM00458 Ricin-type beta-trefoil C2U39_RS22395 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U39_RS22395 SM00954 Region found in RelA / SpoT proteins C2U39_RS22400 SM01409 C2U39_RS22400 C2U39_RS22405 SM00072 Guanylate kinase homologues. C2U39_RS22425 SM00267 diguanylate cyclase C2U39_RS22475 SM00267 diguanylate cyclase C2U39_RS22555 SM00387 Histidine kinase-like ATPases C2U39_RS22560 SM00448 cheY-homologous receiver domain C2U39_RS22560 SM00850 LytTr DNA-binding domain C2U39_RS22575 SM01001 AIR carboxylase C2U39_RS22590 SM00360 RNA recognition motif C2U39_RS22690 SM00857 Resolvase, N terminal domain C2U39_RS22700 SM00857 Resolvase, N terminal domain C2U39_RS22775 SM00857 Resolvase, N terminal domain C2U39_RS22865 SM00479 C2U39_RS22865 C2U39_RS22885 SM00422 helix_turn_helix, mercury resistance C2U39_RS22915 SM00670 Large family of predicted nucleotide-binding domains C2U39_RS22925 SM00857 Resolvase, N terminal domain C2U39_RS23140 SM00318 Staphylococcal nuclease homologues C2U39_RS23145 SM00411 bacterial (prokaryotic) histone like domain C2U39_RS23155 SM00530 Helix-turn-helix XRE-family like proteins C2U39_RS23215 SM00382 ATPases associated with a variety of cellular activities C2U39_RS23280 SM00857 Resolvase, N terminal domain C2U39_RS23375 SM00470 ParB-like nuclease domain C2U39_RS23460 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C2U39_RS23460 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C2U39_RS23460 SM00493 C2U39_RS23460 C2U39_RS23575 SM00052 Putative diguanylate phosphodiesterase C2U39_RS23645 SM00327 von Willebrand factor (vWF) type A domain C2U39_RS23770 SM00778 Zinc-binding domain of primase-helicase C2U39_RS23805 SM00857 Resolvase, N terminal domain C2U39_RS23910 SM00382 ATPases associated with a variety of cellular activities C2U39_RS23950 SM00857 Resolvase, N terminal domain C2U39_RS24005 SM00479 C2U39_RS24005