C2U40_RS00030 SM00965 Secretin and TonB N terminus short domain C2U40_RS00045 SM00382 ATPases associated with a variety of cellular activities C2U40_RS00115 SM00316 Ribosomal protein S1-like RNA-binding domain C2U40_RS00125 SM00886 Stress responsive A/B Barrel Domain C2U40_RS00160 SM00448 cheY-homologous receiver domain C2U40_RS00160 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS00165 SM00387 Histidine kinase-like ATPases C2U40_RS00165 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS00165 SM00448 cheY-homologous receiver domain C2U40_RS00170 SM00331 Sigma factor PP2C-like phosphatases C2U40_RS00170 SM00387 Histidine kinase-like ATPases C2U40_RS00180 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U40_RS00180 SM00091 PAS domain C2U40_RS00185 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS00240 SM01018 B12 binding domain C2U40_RS00255 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS00260 SM00448 cheY-homologous receiver domain C2U40_RS00260 SM00862 Transcriptional regulatory protein, C terminal C2U40_RS00270 SM00999 Aerolysin toxin C2U40_RS00300 SM00876 Biotin and Thiamin Synthesis associated domain C2U40_RS00305 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS00345 SM00267 diguanylate cyclase C2U40_RS00455 SM01219 C2U40_RS00455 C2U40_RS00490 SM00100 Cyclic nucleotide-monophosphate binding domain C2U40_RS00520 SM00382 ATPases associated with a variety of cellular activities C2U40_RS00530 SM00852 Probable molybdopterin binding domain C2U40_RS00550 SM00344 helix_turn_helix ASNC type C2U40_RS00570 SM00642 Alpha-amylase domain C2U40_RS00720 SM00862 Transcriptional regulatory protein, C terminal C2U40_RS00730 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C2U40_RS00780 SM00487 DEAD-like helicases superfamily C2U40_RS00780 SM00490 helicase superfamily c-terminal domain C2U40_RS00825 SM00271 DnaJ molecular chaperone homology domain C2U40_RS00860 SM00357 Cold shock protein domain C2U40_RS00860 SM00955 C2U40_RS00860 C2U40_RS00875 SM00421 helix_turn_helix, Lux Regulon C2U40_RS00910 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U40_RS00910 SM00895 C2U40_RS00910 C2U40_RS00925 SM00363 S4 RNA-binding domain C2U40_RS00940 SM00382 ATPases associated with a variety of cellular activities C2U40_RS00995 SM00421 helix_turn_helix, Lux Regulon C2U40_RS01030 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS01060 SM00859 Semialdehyde dehydrogenase, NAD binding domain C2U40_RS01105 SM01266 C2U40_RS01105 C2U40_RS01135 SM00382 ATPases associated with a variety of cellular activities C2U40_RS01150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS01150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS01150 SM01049 C2U40_RS01150 C2U40_RS01185 SM00245 tail specific protease C2U40_RS01265 SM00487 DEAD-like helicases superfamily C2U40_RS01265 SM00490 helicase superfamily c-terminal domain C2U40_RS01285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS01350 SM00938 Nitrogen regulatory protein P-II C2U40_RS01365 SM00382 ATPases associated with a variety of cellular activities C2U40_RS01380 SM00382 ATPases associated with a variety of cellular activities C2U40_RS01385 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS01385 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C2U40_RS01405 SM00671 Sel1-like repeats. C2U40_RS01420 SM01091 Transporter associated domain C2U40_RS01430 SM00382 ATPases associated with a variety of cellular activities C2U40_RS01430 SM00962 SRP54-type protein, GTPase domain C2U40_RS01430 SM00963 SRP54-type protein, helical bundle domain C2U40_RS01460 SM00927 DNA mismatch repair enzyme MutH C2U40_RS01475 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2U40_RS01505 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2U40_RS01520 SM00904 Riboflavin kinase C2U40_RS01605 SM00938 Nitrogen regulatory protein P-II C2U40_RS01620 SM00267 diguanylate cyclase C2U40_RS01625 SM00316 Ribosomal protein S1-like RNA-binding domain C2U40_RS01625 SM00357 Cold shock protein domain C2U40_RS01625 SM00955 C2U40_RS01625 C2U40_RS01630 SM00967 RNA 2'-O ribose methyltransferase substrate binding C2U40_RS01705 SM00829 Enoylreductase C2U40_RS01750 SM00382 ATPases associated with a variety of cellular activities C2U40_RS01755 SM00327 von Willebrand factor (vWF) type A domain C2U40_RS01765 SM00267 diguanylate cyclase C2U40_RS01785 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U40_RS01795 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U40_RS01845 SM00849 Metallo-beta-lactamase superfamily C2U40_RS01855 SM00986 Uracil DNA glycosylase superfamily C2U40_RS01855 SM00987 UreE urease accessory protein, C-terminal domain C2U40_RS01860 SM00487 DEAD-like helicases superfamily C2U40_RS01860 SM00490 helicase superfamily c-terminal domain C2U40_RS01965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS01965 SM00387 Histidine kinase-like ATPases C2U40_RS01965 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS01970 SM00448 cheY-homologous receiver domain C2U40_RS01970 SM00862 Transcriptional regulatory protein, C terminal C2U40_RS01980 SM00382 ATPases associated with a variety of cellular activities C2U40_RS01985 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS01990 SM00382 ATPases associated with a variety of cellular activities C2U40_RS02030 SM00822 C2U40_RS02030 C2U40_RS02045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS02045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS02055 SM00287 Bacterial SH3 domain homologues C2U40_RS02080 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2U40_RS02180 SM00358 Double-stranded RNA binding motif C2U40_RS02180 SM00535 Ribonuclease III family C2U40_RS02245 SM00420 helix_turn_helix, Deoxyribose operon repressor C2U40_RS02245 SM01134 C2U40_RS02245 C2U40_RS02250 SM00644 C2U40_RS02250 C2U40_RS02260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS02260 SM00387 Histidine kinase-like ATPases C2U40_RS02260 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS02260 SM00448 cheY-homologous receiver domain C2U40_RS02270 SM00954 Region found in RelA / SpoT proteins C2U40_RS02285 SM01192 C2U40_RS02285 C2U40_RS02285 SM01193 C2U40_RS02285 C2U40_RS02325 SM00257 Lysin motif C2U40_RS02350 SM00400 zinc finger C2U40_RS02350 SM00493 C2U40_RS02350 C2U40_RS02350 SM00766 DNA primase DnaG DnaB-binding C2U40_RS02370 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins C2U40_RS02370 SM00632 C2U40_RS02370 C2U40_RS02370 SM00642 Alpha-amylase domain C2U40_RS02385 SM01209 C2U40_RS02385 C2U40_RS02385 SM01210 C2U40_RS02385 C2U40_RS02390 SM00798 AICARFT/IMPCHase bienzyme C2U40_RS02390 SM00851 MGS-like domain C2U40_RS02395 SM00422 helix_turn_helix, mercury resistance C2U40_RS02410 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U40_RS02495 SM00883 Chaperonin 10 Kd subunit C2U40_RS02510 SM00052 Putative diguanylate phosphodiesterase C2U40_RS02510 SM00267 diguanylate cyclase C2U40_RS02525 SM00487 DEAD-like helicases superfamily C2U40_RS02525 SM00490 helicase superfamily c-terminal domain C2U40_RS02635 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS02650 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS02765 SM00382 ATPases associated with a variety of cellular activities C2U40_RS02820 SM00382 ATPases associated with a variety of cellular activities C2U40_RS02875 SM00382 ATPases associated with a variety of cellular activities C2U40_RS02885 SM00448 cheY-homologous receiver domain C2U40_RS02900 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C2U40_RS02935 SM00327 von Willebrand factor (vWF) type A domain C2U40_RS02940 SM00260 Two component signalling adaptor domain C2U40_RS02940 SM00448 cheY-homologous receiver domain C2U40_RS02950 SM00382 ATPases associated with a variety of cellular activities C2U40_RS02965 SM00052 Putative diguanylate phosphodiesterase C2U40_RS02995 SM00450 Rhodanese Homology Domain C2U40_RS03010 SM00382 ATPases associated with a variety of cellular activities C2U40_RS03090 SM00267 diguanylate cyclase C2U40_RS03110 SM00052 Putative diguanylate phosphodiesterase C2U40_RS03110 SM00091 PAS domain C2U40_RS03110 SM00267 diguanylate cyclase C2U40_RS03145 SM00479 C2U40_RS03145 C2U40_RS03185 SM00357 Cold shock protein domain C2U40_RS03195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS03195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS03240 SM00495 Chitin-binding domain type 3 C2U40_RS03240 SM00636 C2U40_RS03240 C2U40_RS03245 SM00028 Tetratricopeptide repeats C2U40_RS03295 SM00382 ATPases associated with a variety of cellular activities C2U40_RS03300 SM00382 ATPases associated with a variety of cellular activities C2U40_RS03335 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase C2U40_RS03375 SM01057 Eukaryotic-type carbonic anhydrase C2U40_RS03385 SM00477 DNA/RNA non-specific endonuclease C2U40_RS03385 SM00892 DNA/RNA non-specific endonuclease C2U40_RS03410 SM00563 Phosphate acyltransferases C2U40_RS03470 SM00825 Beta-ketoacyl synthase C2U40_RS03480 SM00822 C2U40_RS03480 C2U40_RS03485 SM00825 Beta-ketoacyl synthase C2U40_RS03495 SM00852 Probable molybdopterin binding domain C2U40_RS03520 SM00382 ATPases associated with a variety of cellular activities C2U40_RS03565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS03565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS03575 SM00870 C2U40_RS03575 C2U40_RS03585 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2U40_RS03615 SM01266 C2U40_RS03615 C2U40_RS03635 SM00829 Enoylreductase C2U40_RS03660 SM00878 Biotin carboxylase C-terminal domain C2U40_RS03685 SM00052 Putative diguanylate phosphodiesterase C2U40_RS03685 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U40_RS03685 SM00091 PAS domain C2U40_RS03685 SM00267 diguanylate cyclase C2U40_RS03750 SM00020 Trypsin-like serine protease C2U40_RS03775 SM00382 ATPases associated with a variety of cellular activities C2U40_RS03795 SM00861 Transketolase, pyrimidine binding domain C2U40_RS03830 SM01103 C2U40_RS03830 C2U40_RS03840 SM00382 ATPases associated with a variety of cellular activities C2U40_RS03880 SM00316 Ribosomal protein S1-like RNA-binding domain C2U40_RS03900 SM01387 C2U40_RS03900 C2U40_RS03905 SM00316 Ribosomal protein S1-like RNA-binding domain C2U40_RS03905 SM00322 K homology RNA-binding domain C2U40_RS03920 SM00267 diguanylate cyclase C2U40_RS03950 SM00448 cheY-homologous receiver domain C2U40_RS03950 SM00850 LytTr DNA-binding domain C2U40_RS03955 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2U40_RS03960 SM00421 helix_turn_helix, Lux Regulon C2U40_RS03960 SM00448 cheY-homologous receiver domain C2U40_RS03965 SM00387 Histidine kinase-like ATPases C2U40_RS03965 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS03980 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C2U40_RS04055 SM00422 helix_turn_helix, mercury resistance C2U40_RS04085 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U40_RS04105 SM00936 Penicillin-binding protein 5, C-terminal domain C2U40_RS04175 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U40_RS04175 SM01091 Transporter associated domain C2U40_RS04190 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U40_RS04205 SM00357 Cold shock protein domain C2U40_RS04210 SM00267 diguanylate cyclase C2U40_RS04235 SM00267 diguanylate cyclase C2U40_RS04260 SM00841 Elongation factor P, C-terminal C2U40_RS04260 SM01185 C2U40_RS04260 C2U40_RS04275 SM01240 C2U40_RS04275 C2U40_RS04295 SM00387 Histidine kinase-like ATPases C2U40_RS04295 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS04300 SM00448 cheY-homologous receiver domain C2U40_RS04300 SM00862 Transcriptional regulatory protein, C terminal C2U40_RS04310 SM00822 C2U40_RS04310 C2U40_RS04315 SM01236 C2U40_RS04315 C2U40_RS04415 SM00849 Metallo-beta-lactamase superfamily C2U40_RS04425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS04425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS04440 SM00842 Cell division protein FtsA C2U40_RS04460 SM00965 Secretin and TonB N terminus short domain C2U40_RS04535 SM01150 C2U40_RS04535 C2U40_RS04550 SM00890 Domain of unknown function C2U40_RS04560 SM00642 Alpha-amylase domain C2U40_RS04570 SM01022 C2U40_RS04570 C2U40_RS04575 SM00100 Cyclic nucleotide-monophosphate binding domain C2U40_RS04645 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS04675 SM00382 ATPases associated with a variety of cellular activities C2U40_RS04710 SM00487 DEAD-like helicases superfamily C2U40_RS04730 SM01126 C2U40_RS04730 C2U40_RS04770 SM01400 C2U40_RS04770 C2U40_RS04795 SM00937 C2U40_RS04795 C2U40_RS04830 SM00986 Uracil DNA glycosylase superfamily C2U40_RS04830 SM00987 UreE urease accessory protein, C-terminal domain C2U40_RS04855 SM00460 Transglutaminase/protease-like homologues C2U40_RS04880 SM00732 Likely ribonuclease with RNase H fold. C2U40_RS04890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS04910 SM00731 SprT homologues. C2U40_RS04920 SM00861 Transketolase, pyrimidine binding domain C2U40_RS04960 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS04970 SM00788 Adenylosuccinate synthetase C2U40_RS05015 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C2U40_RS05015 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C2U40_RS05015 SM00493 C2U40_RS05015 C2U40_RS05030 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS05050 SM00382 ATPases associated with a variety of cellular activities C2U40_RS05055 SM00382 ATPases associated with a variety of cellular activities C2U40_RS05075 SM00091 PAS domain C2U40_RS05075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS05075 SM00387 Histidine kinase-like ATPases C2U40_RS05075 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS05075 SM00448 cheY-homologous receiver domain C2U40_RS05125 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U40_RS05125 SM00091 PAS domain C2U40_RS05125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS05135 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS05145 SM00852 Probable molybdopterin binding domain C2U40_RS05155 SM00382 ATPases associated with a variety of cellular activities C2U40_RS05170 SM00382 ATPases associated with a variety of cellular activities C2U40_RS05170 SM00448 cheY-homologous receiver domain C2U40_RS05175 SM00387 Histidine kinase-like ATPases C2U40_RS05175 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS05230 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C2U40_RS05245 SM00387 Histidine kinase-like ATPases C2U40_RS05245 SM00448 cheY-homologous receiver domain C2U40_RS05250 SM00919 Malic enzyme, NAD binding domain C2U40_RS05250 SM01274 C2U40_RS05250 C2U40_RS05355 SM00267 diguanylate cyclase C2U40_RS05380 SM00382 ATPases associated with a variety of cellular activities C2U40_RS05415 SM00382 ATPases associated with a variety of cellular activities C2U40_RS05420 SM00382 ATPases associated with a variety of cellular activities C2U40_RS05435 SM00448 cheY-homologous receiver domain C2U40_RS05435 SM00862 Transcriptional regulatory protein, C terminal C2U40_RS05535 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS05535 SM00387 Histidine kinase-like ATPases C2U40_RS05535 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS05535 SM00448 cheY-homologous receiver domain C2U40_RS05535 SM00918 Ligated ion channel L-glutamate- and glycine-binding site C2U40_RS05590 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS05610 SM00528 Domain in histone-like proteins of HNS family C2U40_RS05635 SM00382 ATPases associated with a variety of cellular activities C2U40_RS05650 SM01131 C2U40_RS05650 C2U40_RS05680 SM00271 DnaJ molecular chaperone homology domain C2U40_RS05705 SM00640 Glycosyl hydrolases family 32 C2U40_RS05730 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2U40_RS05755 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U40_RS05755 SM00091 PAS domain C2U40_RS05755 SM00267 diguanylate cyclase C2U40_RS05815 SM00028 Tetratricopeptide repeats C2U40_RS05815 SM00448 cheY-homologous receiver domain C2U40_RS05910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS05910 SM00387 Histidine kinase-like ATPases C2U40_RS05910 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS05910 SM00448 cheY-homologous receiver domain C2U40_RS05925 SM00448 cheY-homologous receiver domain C2U40_RS05925 SM00862 Transcriptional regulatory protein, C terminal C2U40_RS06015 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS06105 SM00247 Beta/gamma crystallins C2U40_RS06120 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS06180 SM00481 DNA polymerase alpha chain like domain C2U40_RS06200 SM00363 S4 RNA-binding domain C2U40_RS06290 SM00984 UDP binding domain C2U40_RS06355 SM00487 DEAD-like helicases superfamily C2U40_RS06355 SM00490 helicase superfamily c-terminal domain C2U40_RS06380 SM00861 Transketolase, pyrimidine binding domain C2U40_RS06390 SM00357 Cold shock protein domain C2U40_RS06425 SM00420 helix_turn_helix, Deoxyribose operon repressor C2U40_RS06425 SM01134 C2U40_RS06425 C2U40_RS06450 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS06455 SM00363 S4 RNA-binding domain C2U40_RS06485 SM00858 C2U40_RS06485 C2U40_RS06490 SM00260 Two component signalling adaptor domain C2U40_RS06490 SM00448 cheY-homologous receiver domain C2U40_RS06495 SM00138 Methyltransferase, chemotaxis proteins C2U40_RS06540 SM00047 Lysozyme subfamily 2 C2U40_RS06555 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U40_RS06555 SM00924 MgtE intracellular N domain C2U40_RS06560 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS06580 SM00073 Histidine Phosphotransfer domain C2U40_RS06590 SM00897 FIST N domain C2U40_RS06590 SM01204 C2U40_RS06590 C2U40_RS06595 SM00387 Histidine kinase-like ATPases C2U40_RS06595 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS06595 SM00448 cheY-homologous receiver domain C2U40_RS06600 SM00464 Found in ATP-dependent protease La (LON) C2U40_RS06605 SM00421 helix_turn_helix, Lux Regulon C2U40_RS06605 SM00448 cheY-homologous receiver domain C2U40_RS06610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS06610 SM00387 Histidine kinase-like ATPases C2U40_RS06615 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U40_RS06630 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C2U40_RS06655 SM00852 Probable molybdopterin binding domain C2U40_RS06685 SM00382 ATPases associated with a variety of cellular activities C2U40_RS06745 SM00382 ATPases associated with a variety of cellular activities C2U40_RS06765 SM00421 helix_turn_helix, Lux Regulon C2U40_RS06765 SM00448 cheY-homologous receiver domain C2U40_RS06770 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C2U40_RS06770 SM00465 GIY-YIG type nucleases (URI domain) C2U40_RS06800 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U40_RS06800 SM00091 PAS domain C2U40_RS06800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS06805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS06860 SM00840 C2U40_RS06860 C2U40_RS06885 SM00267 diguanylate cyclase C2U40_RS06890 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS06895 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS06925 SM00899 C2U40_RS06925 C2U40_RS06950 SM00382 ATPases associated with a variety of cellular activities C2U40_RS06960 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS06970 SM00382 ATPases associated with a variety of cellular activities C2U40_RS07015 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain C2U40_RS07020 SM00851 MGS-like domain C2U40_RS07020 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C2U40_RS07025 SM00917 LeuA allosteric (dimerisation) domain C2U40_RS07045 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2U40_RS07060 SM00487 DEAD-like helicases superfamily C2U40_RS07060 SM00490 helicase superfamily c-terminal domain C2U40_RS07070 SM01351 C2U40_RS07070 C2U40_RS07085 SM00422 helix_turn_helix, mercury resistance C2U40_RS07100 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS07110 SM00382 ATPases associated with a variety of cellular activities C2U40_RS07125 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U40_RS07130 SM00382 ATPases associated with a variety of cellular activities C2U40_RS07150 SM00052 Putative diguanylate phosphodiesterase C2U40_RS07150 SM00267 diguanylate cyclase C2U40_RS07170 SM00327 von Willebrand factor (vWF) type A domain C2U40_RS07205 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS07210 SM01217 C2U40_RS07210 C2U40_RS07245 SM00014 Acid phosphatase homologues C2U40_RS07255 SM00859 Semialdehyde dehydrogenase, NAD binding domain C2U40_RS07345 SM00382 ATPases associated with a variety of cellular activities C2U40_RS07425 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS07520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS07525 SM00267 diguanylate cyclase C2U40_RS07610 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U40_RS07610 SM01091 Transporter associated domain C2U40_RS07635 SM00487 DEAD-like helicases superfamily C2U40_RS07635 SM00490 helicase superfamily c-terminal domain C2U40_RS07645 SM00479 C2U40_RS07645 C2U40_RS07650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS07665 SM00478 endonuclease III C2U40_RS07665 SM00525 C2U40_RS07665 C2U40_RS07675 SM00900 C2U40_RS07675 C2U40_RS07710 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U40_RS07710 SM00091 PAS domain C2U40_RS07710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS07750 SM00487 DEAD-like helicases superfamily C2U40_RS07750 SM00490 helicase superfamily c-terminal domain C2U40_RS07770 SM00448 cheY-homologous receiver domain C2U40_RS07770 SM00850 LytTr DNA-binding domain C2U40_RS07775 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2U40_RS07780 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS07815 SM00382 ATPases associated with a variety of cellular activities C2U40_RS07820 SM00382 ATPases associated with a variety of cellular activities C2U40_RS07835 SM01005 Alanine racemase, C-terminal domain C2U40_RS07870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS07870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS08100 SM00382 ATPases associated with a variety of cellular activities C2U40_RS08175 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS08180 SM00873 B3/4 domain C2U40_RS08185 SM01005 Alanine racemase, C-terminal domain C2U40_RS08190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS08190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS08195 SM00052 Putative diguanylate phosphodiesterase C2U40_RS08195 SM00448 cheY-homologous receiver domain C2U40_RS08200 SM00448 cheY-homologous receiver domain C2U40_RS08205 SM00138 Methyltransferase, chemotaxis proteins C2U40_RS08210 SM00260 Two component signalling adaptor domain C2U40_RS08215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS08220 SM00073 Histidine Phosphotransfer domain C2U40_RS08220 SM00260 Two component signalling adaptor domain C2U40_RS08220 SM00387 Histidine kinase-like ATPases C2U40_RS08220 SM01231 C2U40_RS08220 C2U40_RS08230 SM00448 cheY-homologous receiver domain C2U40_RS08280 SM00382 ATPases associated with a variety of cellular activities C2U40_RS08285 SM00382 ATPases associated with a variety of cellular activities C2U40_RS08375 SM00507 HNH nucleases C2U40_RS08395 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2U40_RS08395 SM00382 ATPases associated with a variety of cellular activities C2U40_RS08405 SM00493 C2U40_RS08405 C2U40_RS08415 SM00387 Histidine kinase-like ATPases C2U40_RS08455 SM00052 Putative diguanylate phosphodiesterase C2U40_RS08455 SM00267 diguanylate cyclase C2U40_RS08490 SM00823 Phosphopantetheine attachment site C2U40_RS08495 SM00822 C2U40_RS08495 C2U40_RS08500 SM00823 Phosphopantetheine attachment site C2U40_RS08520 SM00382 ATPases associated with a variety of cellular activities C2U40_RS08565 SM00893 Electron transfer flavoprotein domain C2U40_RS08570 SM00893 Electron transfer flavoprotein domain C2U40_RS08590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS08590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS08595 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U40_RS08630 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U40_RS08630 SM01240 C2U40_RS08630 C2U40_RS08650 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS08660 SM00364 Leucine-rich repeats, bacterial type C2U40_RS08660 SM00369 Leucine-rich repeats, typical (most populated) subfamily C2U40_RS08675 SM00855 Phosphoglycerate mutase family C2U40_RS08700 SM00487 DEAD-like helicases superfamily C2U40_RS08700 SM00490 helicase superfamily c-terminal domain C2U40_RS08700 SM00982 C2U40_RS08700 C2U40_RS08700 SM01058 CarD-like/TRCF domain C2U40_RS08715 SM00382 ATPases associated with a variety of cellular activities C2U40_RS08725 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS08750 SM00382 ATPases associated with a variety of cellular activities C2U40_RS08750 SM00994 ClpX C4-type zinc finger C2U40_RS08750 SM01086 C-terminal, D2-small domain, of ClpB protein C2U40_RS08755 SM00382 ATPases associated with a variety of cellular activities C2U40_RS08755 SM00464 Found in ATP-dependent protease La (LON) C2U40_RS08760 SM00411 bacterial (prokaryotic) histone like domain C2U40_RS08770 SM00382 ATPases associated with a variety of cellular activities C2U40_RS08785 SM00479 C2U40_RS08785 C2U40_RS08790 SM00100 Cyclic nucleotide-monophosphate binding domain C2U40_RS08790 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U40_RS08830 SM00422 helix_turn_helix, mercury resistance C2U40_RS08840 SM00878 Biotin carboxylase C-terminal domain C2U40_RS08885 SM00822 C2U40_RS08885 C2U40_RS08910 SM00429 ig-like, plexins, transcription factors C2U40_RS08910 SM00869 Autotransporter beta-domain C2U40_RS08945 SM00052 Putative diguanylate phosphodiesterase C2U40_RS08945 SM00267 diguanylate cyclase C2U40_RS08955 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS08960 SM00822 C2U40_RS08960 C2U40_RS08970 SM00518 AP endonuclease family 2 C2U40_RS09000 SM00090 RIO-like kinase C2U40_RS09010 SM00267 diguanylate cyclase C2U40_RS09020 SM00486 DNA polymerase type-B family C2U40_RS09100 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U40_RS09185 SM00422 helix_turn_helix, mercury resistance C2U40_RS09195 SM00052 Putative diguanylate phosphodiesterase C2U40_RS09225 SM00028 Tetratricopeptide repeats C2U40_RS09230 SM00327 von Willebrand factor (vWF) type A domain C2U40_RS09265 SM01322 C2U40_RS09265 C2U40_RS09285 SM00382 ATPases associated with a variety of cellular activities C2U40_RS09295 SM00382 ATPases associated with a variety of cellular activities C2U40_RS09410 SM00822 C2U40_RS09410 C2U40_RS09465 SM00829 Enoylreductase C2U40_RS09545 SM00829 Enoylreductase C2U40_RS09550 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U40_RS09575 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U40_RS09620 SM00382 ATPases associated with a variety of cellular activities C2U40_RS09675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS09675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS09685 SM00857 Resolvase, N terminal domain C2U40_RS09705 SM01092 CO dehydrogenase flavoprotein C-terminal domain C2U40_RS09710 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C2U40_RS09730 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C2U40_RS09735 SM01092 CO dehydrogenase flavoprotein C-terminal domain C2U40_RS09745 SM00237 Domains in Na-Ca exchangers and integrin-beta4 C2U40_RS09780 SM00073 Histidine Phosphotransfer domain C2U40_RS09780 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U40_RS09780 SM00091 PAS domain C2U40_RS09780 SM00387 Histidine kinase-like ATPases C2U40_RS09780 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS09780 SM00448 cheY-homologous receiver domain C2U40_RS09785 SM00091 PAS domain C2U40_RS09790 SM00448 cheY-homologous receiver domain C2U40_RS09790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS09830 SM00491 C2U40_RS09830 C2U40_RS09860 SM00341 Helicase and RNase D C-terminal C2U40_RS09860 SM00474 3'-5' exonuclease C2U40_RS09865 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS09890 SM00382 ATPases associated with a variety of cellular activities C2U40_RS09905 SM00421 helix_turn_helix, Lux Regulon C2U40_RS09910 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U40_RS09915 SM00382 ATPases associated with a variety of cellular activities C2U40_RS09915 SM00487 DEAD-like helicases superfamily C2U40_RS09915 SM00490 helicase superfamily c-terminal domain C2U40_RS09915 SM00847 Helicase associated domain (HA2) Add an annotation C2U40_RS09930 SM00387 Histidine kinase-like ATPases C2U40_RS09930 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS09930 SM00448 cheY-homologous receiver domain C2U40_RS09935 SM00448 cheY-homologous receiver domain C2U40_RS09935 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS09940 SM00849 Metallo-beta-lactamase superfamily C2U40_RS09945 SM00450 Rhodanese Homology Domain C2U40_RS09965 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase C2U40_RS09975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS09975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS10020 SM00316 Ribosomal protein S1-like RNA-binding domain C2U40_RS10025 SM00363 S4 RNA-binding domain C2U40_RS10075 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. C2U40_RS10080 SM00822 C2U40_RS10080 C2U40_RS10090 SM00825 Beta-ketoacyl synthase C2U40_RS10110 SM00382 ATPases associated with a variety of cellular activities C2U40_RS10205 SM00822 C2U40_RS10205 C2U40_RS10245 SM00382 ATPases associated with a variety of cellular activities C2U40_RS10255 SM00981 C2U40_RS10255 C2U40_RS10285 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C2U40_RS10285 SM00245 tail specific protease C2U40_RS10290 SM00945 ProQ/FINO family C2U40_RS10345 SM00100 Cyclic nucleotide-monophosphate binding domain C2U40_RS10345 SM00419 helix_turn_helix, cAMP Regulatory protein C2U40_RS10380 SM00382 ATPases associated with a variety of cellular activities C2U40_RS10400 SM00354 helix_turn _helix lactose operon repressor C2U40_RS10405 SM00267 diguanylate cyclase C2U40_RS10430 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS10430 SM00387 Histidine kinase-like ATPases C2U40_RS10430 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS10430 SM00448 cheY-homologous receiver domain C2U40_RS10435 SM00411 bacterial (prokaryotic) histone like domain C2U40_RS10440 SM00873 B3/4 domain C2U40_RS10440 SM00874 tRNA synthetase B5 domain C2U40_RS10440 SM00896 Ferredoxin-fold anticodon binding domain C2U40_RS10465 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C2U40_RS10470 SM00671 Sel1-like repeats. C2U40_RS10480 SM00434 DNA Topoisomerase IV C2U40_RS10510 SM00925 MltA specific insert domain C2U40_RS10550 SM00354 helix_turn _helix lactose operon repressor C2U40_RS10575 SM00354 helix_turn _helix lactose operon repressor C2U40_RS10590 SM00953 C2U40_RS10590 C2U40_RS10595 SM00487 DEAD-like helicases superfamily C2U40_RS10595 SM00490 helicase superfamily c-terminal domain C2U40_RS10600 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS10615 SM00463 Small MutS-related domain C2U40_RS10625 SM00091 PAS domain C2U40_RS10625 SM00267 diguanylate cyclase C2U40_RS10630 SM00855 Phosphoglycerate mutase family C2U40_RS10645 SM00495 Chitin-binding domain type 3 C2U40_RS10655 SM00782 PhnA Zinc-Ribbon C2U40_RS10815 SM00642 Alpha-amylase domain C2U40_RS10830 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS10850 SM01144 C2U40_RS10850 C2U40_RS10865 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. C2U40_RS10880 SM00487 DEAD-like helicases superfamily C2U40_RS10880 SM00490 helicase superfamily c-terminal domain C2U40_RS10905 SM01118 C2U40_RS10905 C2U40_RS10975 SM00382 ATPases associated with a variety of cellular activities C2U40_RS10985 SM00382 ATPases associated with a variety of cellular activities C2U40_RS10990 SM00387 Histidine kinase-like ATPases C2U40_RS10990 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS10990 SM00448 cheY-homologous receiver domain C2U40_RS11050 SM00487 DEAD-like helicases superfamily C2U40_RS11050 SM00490 helicase superfamily c-terminal domain C2U40_RS11055 SM00763 PrkA AAA domain C2U40_RS11070 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U40_RS11095 SM00487 DEAD-like helicases superfamily C2U40_RS11095 SM00490 helicase superfamily c-terminal domain C2U40_RS11115 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS11135 SM00448 cheY-homologous receiver domain C2U40_RS11140 SM00091 PAS domain C2U40_RS11140 SM00387 Histidine kinase-like ATPases C2U40_RS11150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS11150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS11150 SM01049 C2U40_RS11150 C2U40_RS11250 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U40_RS11280 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS11280 SM00871 Bacterial transcription activator, effector binding domain C2U40_RS11285 SM00822 C2U40_RS11285 C2U40_RS11315 SM00859 Semialdehyde dehydrogenase, NAD binding domain C2U40_RS11355 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U40_RS11355 SM00866 C2U40_RS11355 C2U40_RS11365 SM00382 ATPases associated with a variety of cellular activities C2U40_RS11385 SM00881 CoA binding domain C2U40_RS11400 SM00861 Transketolase, pyrimidine binding domain C2U40_RS11440 SM00825 Beta-ketoacyl synthase C2U40_RS11505 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS11515 SM00382 ATPases associated with a variety of cellular activities C2U40_RS11530 SM01007 Class II Aldolase and Adducin N-terminal domain C2U40_RS11540 SM00479 C2U40_RS11540 C2U40_RS11595 SM00267 diguanylate cyclase C2U40_RS11595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS11605 SM00091 PAS domain C2U40_RS11605 SM00382 ATPases associated with a variety of cellular activities C2U40_RS11650 SM00382 ATPases associated with a variety of cellular activities C2U40_RS11670 SM00382 ATPases associated with a variety of cellular activities C2U40_RS11675 SM00382 ATPases associated with a variety of cellular activities C2U40_RS11705 SM00382 ATPases associated with a variety of cellular activities C2U40_RS11715 SM00843 C2U40_RS11715 C2U40_RS11720 SM00344 helix_turn_helix ASNC type C2U40_RS11740 SM00267 diguanylate cyclase C2U40_RS11740 SM00448 cheY-homologous receiver domain C2U40_RS11760 SM00316 Ribosomal protein S1-like RNA-binding domain C2U40_RS11765 SM00382 ATPases associated with a variety of cellular activities C2U40_RS11765 SM01086 C-terminal, D2-small domain, of ClpB protein C2U40_RS11775 SM00357 Cold shock protein domain C2U40_RS11840 SM00382 ATPases associated with a variety of cellular activities C2U40_RS11845 SM00382 ATPases associated with a variety of cellular activities C2U40_RS11845 SM01086 C-terminal, D2-small domain, of ClpB protein C2U40_RS11895 SM00671 Sel1-like repeats. C2U40_RS11940 SM01154 C2U40_RS11940 C2U40_RS11955 SM00528 Domain in histone-like proteins of HNS family C2U40_RS11980 SM01144 C2U40_RS11980 C2U40_RS11990 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C2U40_RS11995 SM00028 Tetratricopeptide repeats C2U40_RS12005 SM00411 bacterial (prokaryotic) histone like domain C2U40_RS12010 SM00316 Ribosomal protein S1-like RNA-binding domain C2U40_RS12055 SM00052 Putative diguanylate phosphodiesterase C2U40_RS12055 SM00267 diguanylate cyclase C2U40_RS12070 SM00448 cheY-homologous receiver domain C2U40_RS12075 SM00091 PAS domain C2U40_RS12100 SM00360 RNA recognition motif C2U40_RS12165 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C2U40_RS12170 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C2U40_RS12170 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C2U40_RS12210 SM00897 FIST N domain C2U40_RS12210 SM01204 C2U40_RS12210 C2U40_RS12215 SM00091 PAS domain C2U40_RS12215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS12220 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS12225 SM01211 C2U40_RS12225 C2U40_RS12230 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS12255 SM00564 beta-propeller repeat C2U40_RS12275 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS12280 SM00028 Tetratricopeptide repeats C2U40_RS12290 SM00562 C2U40_RS12290 C2U40_RS12315 SM00271 DnaJ molecular chaperone homology domain C2U40_RS12365 SM00028 Tetratricopeptide repeats C2U40_RS12370 SM00450 Rhodanese Homology Domain C2U40_RS12385 SM01323 C2U40_RS12385 C2U40_RS12400 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U40_RS12440 SM00382 ATPases associated with a variety of cellular activities C2U40_RS12450 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2U40_RS12455 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2U40_RS12555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS12555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS12635 SM00981 C2U40_RS12635 C2U40_RS12670 SM00857 Resolvase, N terminal domain C2U40_RS12705 SM01252 C2U40_RS12705 C2U40_RS12730 SM01359 C2U40_RS12730 C2U40_RS12730 SM01360 C2U40_RS12730 C2U40_RS12735 SM00450 Rhodanese Homology Domain C2U40_RS12740 SM00052 Putative diguanylate phosphodiesterase C2U40_RS12740 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U40_RS12740 SM00091 PAS domain C2U40_RS12740 SM00267 diguanylate cyclase C2U40_RS12765 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS12765 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C2U40_RS12770 SM00382 ATPases associated with a variety of cellular activities C2U40_RS12840 SM00382 ATPases associated with a variety of cellular activities C2U40_RS12915 SM00830 Chorismate mutase type II C2U40_RS12940 SM00420 helix_turn_helix, Deoxyribose operon repressor C2U40_RS12940 SM01134 C2U40_RS12940 C2U40_RS13010 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U40_RS13035 SM00871 Bacterial transcription activator, effector binding domain C2U40_RS13060 SM00363 S4 RNA-binding domain C2U40_RS13070 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C2U40_RS13090 SM00507 HNH nucleases C2U40_RS13095 SM00855 Phosphoglycerate mutase family C2U40_RS13120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS13120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS13160 SM00563 Phosphate acyltransferases C2U40_RS13170 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C2U40_RS13180 SM00867 YceI-like domain C2U40_RS13205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS13205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS13215 SM00852 Probable molybdopterin binding domain C2U40_RS13250 SM00491 C2U40_RS13250 C2U40_RS13275 SM00098 Alkaline phosphatase homologues C2U40_RS13280 SM00098 Alkaline phosphatase homologues C2U40_RS13300 SM00421 helix_turn_helix, Lux Regulon C2U40_RS13300 SM00448 cheY-homologous receiver domain C2U40_RS13305 SM00387 Histidine kinase-like ATPases C2U40_RS13315 SM00267 diguanylate cyclase C2U40_RS13320 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS13320 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C2U40_RS13330 SM00382 ATPases associated with a variety of cellular activities C2U40_RS13360 SM01091 Transporter associated domain C2U40_RS13370 SM00382 ATPases associated with a variety of cellular activities C2U40_RS13435 SM00382 ATPases associated with a variety of cellular activities C2U40_RS13435 SM00448 cheY-homologous receiver domain C2U40_RS13440 SM00091 PAS domain C2U40_RS13440 SM00387 Histidine kinase-like ATPases C2U40_RS13440 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS13445 SM00382 ATPases associated with a variety of cellular activities C2U40_RS13475 SM00479 C2U40_RS13475 C2U40_RS13490 SM00849 Metallo-beta-lactamase superfamily C2U40_RS13495 SM00257 Lysin motif C2U40_RS13525 SM00354 helix_turn _helix lactose operon repressor C2U40_RS13535 SM00052 Putative diguanylate phosphodiesterase C2U40_RS13535 SM00267 diguanylate cyclase C2U40_RS13610 SM00382 ATPases associated with a variety of cellular activities C2U40_RS13635 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U40_RS13690 SM01081 Putative carbohydrate binding domain C2U40_RS13770 SM00458 Ricin-type beta-trefoil C2U40_RS13845 SM00890 Domain of unknown function C2U40_RS13865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS13890 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U40_RS13890 SM00876 Biotin and Thiamin Synthesis associated domain C2U40_RS13900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS13950 SM00857 Resolvase, N terminal domain C2U40_RS13960 SM00857 Resolvase, N terminal domain C2U40_RS13985 SM01091 Transporter associated domain C2U40_RS14010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS14010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS14055 SM00859 Semialdehyde dehydrogenase, NAD binding domain C2U40_RS14115 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS14220 SM00487 DEAD-like helicases superfamily C2U40_RS14220 SM00490 helicase superfamily c-terminal domain C2U40_RS14245 SM00487 DEAD-like helicases superfamily C2U40_RS14250 SM00506 Appr-1"-p processing enzyme C2U40_RS14300 SM00028 Tetratricopeptide repeats C2U40_RS14330 SM01329 C2U40_RS14330 C2U40_RS14335 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS14380 SM00354 helix_turn _helix lactose operon repressor C2U40_RS14470 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. C2U40_RS14570 SM00382 ATPases associated with a variety of cellular activities C2U40_RS14580 SM00260 Two component signalling adaptor domain C2U40_RS14585 SM00260 Two component signalling adaptor domain C2U40_RS14605 SM00448 cheY-homologous receiver domain C2U40_RS14610 SM00073 Histidine Phosphotransfer domain C2U40_RS14610 SM00260 Two component signalling adaptor domain C2U40_RS14610 SM00387 Histidine kinase-like ATPases C2U40_RS14610 SM01231 C2U40_RS14610 C2U40_RS14620 SM00448 cheY-homologous receiver domain C2U40_RS14635 SM00382 ATPases associated with a variety of cellular activities C2U40_RS14635 SM00962 SRP54-type protein, GTPase domain C2U40_RS14695 SM00382 ATPases associated with a variety of cellular activities C2U40_RS14725 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS14730 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U40_RS14735 SM00448 cheY-homologous receiver domain C2U40_RS14735 SM00862 Transcriptional regulatory protein, C terminal C2U40_RS14740 SM00387 Histidine kinase-like ATPases C2U40_RS14785 SM00481 DNA polymerase alpha chain like domain C2U40_RS14805 SM00450 Rhodanese Homology Domain C2U40_RS14915 SM00382 ATPases associated with a variety of cellular activities C2U40_RS14920 SM00327 von Willebrand factor (vWF) type A domain C2U40_RS15045 SM00155 Phospholipase D. Active site motifs. C2U40_RS15065 SM00642 Alpha-amylase domain C2U40_RS15120 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U40_RS15140 SM00267 diguanylate cyclase C2U40_RS15160 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS15185 SM00919 Malic enzyme, NAD binding domain C2U40_RS15185 SM01274 C2U40_RS15185 C2U40_RS15190 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS15205 SM00267 diguanylate cyclase C2U40_RS15265 SM00382 ATPases associated with a variety of cellular activities C2U40_RS15310 SM00387 Histidine kinase-like ATPases C2U40_RS15310 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS15315 SM00448 cheY-homologous receiver domain C2U40_RS15315 SM00862 Transcriptional regulatory protein, C terminal C2U40_RS15335 SM00382 ATPases associated with a variety of cellular activities C2U40_RS15345 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS15360 SM00448 cheY-homologous receiver domain C2U40_RS15365 SM00387 Histidine kinase-like ATPases C2U40_RS15370 SM00919 Malic enzyme, NAD binding domain C2U40_RS15370 SM01274 C2U40_RS15370 C2U40_RS15385 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U40_RS15400 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS15435 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C2U40_RS15435 SM00292 breast cancer carboxy-terminal domain C2U40_RS15435 SM00532 Ligase N family C2U40_RS15440 SM00771 ZipA, C-terminal domain (FtsZ-binding) C2U40_RS15475 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS15505 SM00642 Alpha-amylase domain C2U40_RS15515 SM00421 helix_turn_helix, Lux Regulon C2U40_RS15515 SM00448 cheY-homologous receiver domain C2U40_RS15540 SM00267 diguanylate cyclase C2U40_RS15545 SM00977 TilS substrate C-terminal domain C2U40_RS15560 SM00382 ATPases associated with a variety of cellular activities C2U40_RS15580 SM00849 Metallo-beta-lactamase superfamily C2U40_RS15615 SM00862 Transcriptional regulatory protein, C terminal C2U40_RS15625 SM00481 DNA polymerase alpha chain like domain C2U40_RS15655 SM00935 Outer membrane protein (OmpH-like) C2U40_RS15665 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C2U40_RS15710 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS15790 SM00028 Tetratricopeptide repeats C2U40_RS15795 SM00267 diguanylate cyclase C2U40_RS15805 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C2U40_RS15805 SM00475 5'-3' exonuclease C2U40_RS15810 SM01329 C2U40_RS15810 C2U40_RS15840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS15840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS15880 SM00900 C2U40_RS15880 C2U40_RS16000 SM00421 helix_turn_helix, Lux Regulon C2U40_RS16050 SM00912 haemagglutination activity domain C2U40_RS16395 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS16435 SM00830 Chorismate mutase type II C2U40_RS16475 SM00857 Resolvase, N terminal domain C2U40_RS16505 SM00487 DEAD-like helicases superfamily C2U40_RS16650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS16650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS16680 SM00463 Small MutS-related domain C2U40_RS16695 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS16695 SM00478 endonuclease III C2U40_RS16695 SM01009 AlkA N-terminal domain C2U40_RS16740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS16745 SM00448 cheY-homologous receiver domain C2U40_RS16755 SM00073 Histidine Phosphotransfer domain C2U40_RS16755 SM00260 Two component signalling adaptor domain C2U40_RS16755 SM00387 Histidine kinase-like ATPases C2U40_RS16755 SM01231 C2U40_RS16755 C2U40_RS16760 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS16760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS16765 SM00260 Two component signalling adaptor domain C2U40_RS16770 SM00091 PAS domain C2U40_RS16770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS16770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS16775 SM00138 Methyltransferase, chemotaxis proteins C2U40_RS16785 SM00448 cheY-homologous receiver domain C2U40_RS16815 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS16815 SM00387 Histidine kinase-like ATPases C2U40_RS16815 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS16815 SM00448 cheY-homologous receiver domain C2U40_RS16820 SM00421 helix_turn_helix, Lux Regulon C2U40_RS16820 SM00448 cheY-homologous receiver domain C2U40_RS16845 SM00052 Putative diguanylate phosphodiesterase C2U40_RS16865 SM01005 Alanine racemase, C-terminal domain C2U40_RS16870 SM00382 ATPases associated with a variety of cellular activities C2U40_RS16880 SM00978 C2U40_RS16880 C2U40_RS16885 SM00052 Putative diguanylate phosphodiesterase C2U40_RS16910 SM00382 ATPases associated with a variety of cellular activities C2U40_RS16910 SM00448 cheY-homologous receiver domain C2U40_RS16925 SM00320 WD40 repeats C2U40_RS16955 SM00260 Two component signalling adaptor domain C2U40_RS16955 SM00448 cheY-homologous receiver domain C2U40_RS16965 SM00267 diguanylate cyclase C2U40_RS16975 SM00984 UDP binding domain C2U40_RS17035 SM00100 Cyclic nucleotide-monophosphate binding domain C2U40_RS17035 SM00419 helix_turn_helix, cAMP Regulatory protein C2U40_RS17045 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins C2U40_RS17045 SM00495 Chitin-binding domain type 3 C2U40_RS17055 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins C2U40_RS17055 SM00495 Chitin-binding domain type 3 C2U40_RS17055 SM00636 C2U40_RS17055 C2U40_RS17060 SM00387 Histidine kinase-like ATPases C2U40_RS17060 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS17060 SM00448 cheY-homologous receiver domain C2U40_RS17070 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS17125 SM00382 ATPases associated with a variety of cellular activities C2U40_RS17145 SM01133 C2U40_RS17145 C2U40_RS17200 SM00382 ATPases associated with a variety of cellular activities C2U40_RS17215 SM00271 DnaJ molecular chaperone homology domain C2U40_RS17245 SM00650 Ribosomal RNA adenine dimethylases C2U40_RS17265 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS17275 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS17325 SM00244 prohibitin homologues C2U40_RS17330 SM00244 prohibitin homologues C2U40_RS17350 SM00853 MutL C terminal dimerisation domain C2U40_RS17350 SM01340 C2U40_RS17350 C2U40_RS17355 SM00257 Lysin motif C2U40_RS17355 SM00646 C2U40_RS17355 C2U40_RS17385 SM00382 ATPases associated with a variety of cellular activities C2U40_RS17385 SM00930 C2U40_RS17385 C2U40_RS17400 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C2U40_RS17405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS17405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS17410 SM00052 Putative diguanylate phosphodiesterase C2U40_RS17410 SM00448 cheY-homologous receiver domain C2U40_RS17415 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS17415 SM00073 Histidine Phosphotransfer domain C2U40_RS17415 SM00091 PAS domain C2U40_RS17415 SM00387 Histidine kinase-like ATPases C2U40_RS17415 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS17415 SM00448 cheY-homologous receiver domain C2U40_RS17425 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS17430 SM00073 Histidine Phosphotransfer domain C2U40_RS17430 SM00091 PAS domain C2U40_RS17430 SM00387 Histidine kinase-like ATPases C2U40_RS17430 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS17430 SM00448 cheY-homologous receiver domain C2U40_RS17475 SM01130 C2U40_RS17475 C2U40_RS17535 SM00014 Acid phosphatase homologues C2U40_RS17545 SM00917 LeuA allosteric (dimerisation) domain C2U40_RS17550 SM01329 C2U40_RS17550 C2U40_RS17585 SM00382 ATPases associated with a variety of cellular activities C2U40_RS17590 SM00670 Large family of predicted nucleotide-binding domains C2U40_RS17660 SM00014 Acid phosphatase homologues C2U40_RS17675 SM00448 cheY-homologous receiver domain C2U40_RS17675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS17705 SM00487 DEAD-like helicases superfamily C2U40_RS17705 SM00490 helicase superfamily c-terminal domain C2U40_RS17705 SM00847 Helicase associated domain (HA2) Add an annotation C2U40_RS17750 SM00450 Rhodanese Homology Domain C2U40_RS17780 SM00382 ATPases associated with a variety of cellular activities C2U40_RS17845 SM00382 ATPases associated with a variety of cellular activities C2U40_RS17865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS17910 SM00244 prohibitin homologues C2U40_RS17920 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U40_RS17925 SM00382 ATPases associated with a variety of cellular activities C2U40_RS18030 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U40_RS18095 SM00344 helix_turn_helix ASNC type C2U40_RS18110 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U40_RS18120 SM00829 Enoylreductase C2U40_RS18140 SM00642 Alpha-amylase domain C2U40_RS18145 SM00642 Alpha-amylase domain C2U40_RS18155 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2U40_RS18170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS18170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS18300 SM00382 ATPases associated with a variety of cellular activities C2U40_RS18305 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C2U40_RS18310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS18310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS18370 SM01152 C2U40_RS18370 C2U40_RS18390 SM00382 ATPases associated with a variety of cellular activities C2U40_RS18405 SM00487 DEAD-like helicases superfamily C2U40_RS18405 SM00490 helicase superfamily c-terminal domain C2U40_RS18455 SM00411 bacterial (prokaryotic) histone like domain C2U40_RS18470 SM00382 ATPases associated with a variety of cellular activities C2U40_RS18495 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2U40_RS18495 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U40_RS18495 SM00091 PAS domain C2U40_RS18495 SM00267 diguanylate cyclase C2U40_RS18510 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain C2U40_RS18515 SM01133 C2U40_RS18515 C2U40_RS18565 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS18590 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS18820 SM01091 Transporter associated domain C2U40_RS18875 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C2U40_RS18885 SM00382 ATPases associated with a variety of cellular activities C2U40_RS18975 SM00487 DEAD-like helicases superfamily C2U40_RS18980 SM00506 Appr-1"-p processing enzyme C2U40_RS19030 SM00533 DNA-binding domain of DNA mismatch repair MUTS family C2U40_RS19030 SM00534 ATPase domain of DNA mismatch repair MUTS family C2U40_RS19045 SM00347 helix_turn_helix multiple antibiotic resistance protein C2U40_RS19090 SM00382 ATPases associated with a variety of cellular activities C2U40_RS19110 SM00986 Uracil DNA glycosylase superfamily C2U40_RS19110 SM00987 UreE urease accessory protein, C-terminal domain C2U40_RS19145 SM00563 Phosphate acyltransferases C2U40_RS19170 SM00271 DnaJ molecular chaperone homology domain C2U40_RS19200 SM00434 DNA Topoisomerase IV C2U40_RS19205 SM00387 Histidine kinase-like ATPases C2U40_RS19205 SM00433 TopoisomeraseII C2U40_RS19275 SM01118 C2U40_RS19275 C2U40_RS19305 SM00450 Rhodanese Homology Domain C2U40_RS19315 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U40_RS19345 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS19350 SM00382 ATPases associated with a variety of cellular activities C2U40_RS19360 SM00478 endonuclease III C2U40_RS19360 SM00525 C2U40_RS19360 C2U40_RS19385 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS19425 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2U40_RS19425 SM00267 diguanylate cyclase C2U40_RS19430 SM01130 C2U40_RS19430 C2U40_RS19500 SM00382 ATPases associated with a variety of cellular activities C2U40_RS19585 SM00344 helix_turn_helix ASNC type C2U40_RS19590 SM01266 C2U40_RS19590 C2U40_RS19595 SM00642 Alpha-amylase domain C2U40_RS19605 SM00354 helix_turn _helix lactose operon repressor C2U40_RS19620 SM00870 C2U40_RS19620 C2U40_RS19635 SM00851 MGS-like domain C2U40_RS19670 SM00260 Two component signalling adaptor domain C2U40_RS19670 SM00448 cheY-homologous receiver domain C2U40_RS19715 SM01207 C2U40_RS19715 C2U40_RS19720 SM00905 Dihydroneopterin aldolase C2U40_RS19740 SM00833 Cobalamin synthesis protein cobW C-terminal domain C2U40_RS19760 SM00052 Putative diguanylate phosphodiesterase C2U40_RS19775 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS19775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS19780 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS19805 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U40_RS19805 SM00895 C2U40_RS19805 C2U40_RS19810 SM00644 C2U40_RS19810 C2U40_RS19875 SM00957 SecA DEAD-like domain C2U40_RS19875 SM00958 SecA preprotein cross-linking domain C2U40_RS19890 SM00864 Tubulin/FtsZ family, GTPase domain C2U40_RS19890 SM00865 Tubulin/FtsZ family, C-terminal domain C2U40_RS19895 SM00842 Cell division protein FtsA C2U40_RS20085 SM00858 C2U40_RS20085 C2U40_RS20130 SM00382 ATPases associated with a variety of cellular activities C2U40_RS20130 SM00448 cheY-homologous receiver domain C2U40_RS20195 SM00749 bacterial OsmY and nodulation domain C2U40_RS20250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C2U40_RS20255 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C2U40_RS20330 SM00382 ATPases associated with a variety of cellular activities C2U40_RS20350 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U40_RS20355 SM00382 ATPases associated with a variety of cellular activities C2U40_RS20445 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS20475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS20475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS20485 SM00267 diguanylate cyclase C2U40_RS20495 SM00421 helix_turn_helix, Lux Regulon C2U40_RS20505 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS20525 SM00357 Cold shock protein domain C2U40_RS20535 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS20535 SM00267 diguanylate cyclase C2U40_RS20540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS20540 SM00387 Histidine kinase-like ATPases C2U40_RS20540 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS20545 SM00448 cheY-homologous receiver domain C2U40_RS20545 SM00862 Transcriptional regulatory protein, C terminal C2U40_RS20565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS20565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS20575 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U40_RS20575 SM00091 PAS domain C2U40_RS20575 SM00267 diguanylate cyclase C2U40_RS20580 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS20630 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS20640 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U40_RS20640 SM00866 C2U40_RS20640 C2U40_RS20665 SM00382 ATPases associated with a variety of cellular activities C2U40_RS20675 SM00267 diguanylate cyclase C2U40_RS20690 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS20690 SM00871 Bacterial transcription activator, effector binding domain C2U40_RS20700 SM01060 C2U40_RS20700 C2U40_RS20725 SM00014 Acid phosphatase homologues C2U40_RS20765 SM00091 PAS domain C2U40_RS20780 SM01120 C2U40_RS20780 C2U40_RS20840 SM00838 Elongation factor G C-terminus C2U40_RS20840 SM00889 Elongation factor G, domain IV C2U40_RS20880 SM00663 RNA polymerase I subunit A N-terminus C2U40_RS20905 SM00649 Ribosomal protein L11/L12 C2U40_RS20910 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C2U40_RS20910 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C2U40_RS20965 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS20980 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C2U40_RS20980 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C2U40_RS20980 SM00493 C2U40_RS20980 C2U40_RS21000 SM00387 Histidine kinase-like ATPases C2U40_RS21005 SM00448 cheY-homologous receiver domain C2U40_RS21005 SM00862 Transcriptional regulatory protein, C terminal C2U40_RS21040 SM00382 ATPases associated with a variety of cellular activities C2U40_RS21040 SM00448 cheY-homologous receiver domain C2U40_RS21050 SM00387 Histidine kinase-like ATPases C2U40_RS21050 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS21070 SM00116 Domain in cystathionine beta-synthase and other proteins. C2U40_RS21080 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS21085 SM00344 helix_turn_helix ASNC type C2U40_RS21100 SM00849 Metallo-beta-lactamase superfamily C2U40_RS21105 SM00382 ATPases associated with a variety of cellular activities C2U40_RS21105 SM01086 C-terminal, D2-small domain, of ClpB protein C2U40_RS21115 SM00363 S4 RNA-binding domain C2U40_RS21150 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C2U40_RS21150 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C2U40_RS21340 SM00635 Bacterial Ig-like domain 2 C2U40_RS21415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS21415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS21470 SM01126 C2U40_RS21470 C2U40_RS21480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS21480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS21490 SM00382 ATPases associated with a variety of cellular activities C2U40_RS21500 SM01038 Beta galactosidase small chain C2U40_RS21505 SM00354 helix_turn _helix lactose operon repressor C2U40_RS21550 SM00464 Found in ATP-dependent protease La (LON) C2U40_RS21555 SM00836 DALR anticodon binding domain C2U40_RS21555 SM01016 Arginyl tRNA synthetase N terminal dom C2U40_RS21570 SM00382 ATPases associated with a variety of cellular activities C2U40_RS21570 SM01086 C-terminal, D2-small domain, of ClpB protein C2U40_RS21595 SM00382 ATPases associated with a variety of cellular activities C2U40_RS21630 SM00924 MgtE intracellular N domain C2U40_RS21660 SM00341 Helicase and RNase D C-terminal C2U40_RS21660 SM00487 DEAD-like helicases superfamily C2U40_RS21660 SM00490 helicase superfamily c-terminal domain C2U40_RS21660 SM00956 C2U40_RS21660 C2U40_RS21695 SM00382 ATPases associated with a variety of cellular activities C2U40_RS21715 SM01230 C2U40_RS21715 C2U40_RS21760 SM00642 Alpha-amylase domain C2U40_RS21840 SM00822 C2U40_RS21840 C2U40_RS21865 SM00858 C2U40_RS21865 C2U40_RS21925 SM00448 cheY-homologous receiver domain C2U40_RS21925 SM00862 Transcriptional regulatory protein, C terminal C2U40_RS21930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS21930 SM00387 Histidine kinase-like ATPases C2U40_RS21930 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS21940 SM00919 Malic enzyme, NAD binding domain C2U40_RS21940 SM01274 C2U40_RS21940 C2U40_RS21955 SM00487 DEAD-like helicases superfamily C2U40_RS21955 SM00490 helicase superfamily c-terminal domain C2U40_RS22000 SM00382 ATPases associated with a variety of cellular activities C2U40_RS22005 SM00563 Phosphate acyltransferases C2U40_RS22010 SM00563 Phosphate acyltransferases C2U40_RS22055 SM00267 diguanylate cyclase C2U40_RS22060 SM00422 helix_turn_helix, mercury resistance C2U40_RS22130 SM00829 Enoylreductase C2U40_RS22140 SM00052 Putative diguanylate phosphodiesterase C2U40_RS22140 SM00267 diguanylate cyclase C2U40_RS22225 SM00448 cheY-homologous receiver domain C2U40_RS22225 SM00862 Transcriptional regulatory protein, C terminal C2U40_RS22230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS22230 SM00387 Histidine kinase-like ATPases C2U40_RS22230 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS22260 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS22260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS22275 SM00836 DALR anticodon binding domain C2U40_RS22350 SM00849 Metallo-beta-lactamase superfamily C2U40_RS22355 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2U40_RS22355 SM00382 ATPases associated with a variety of cellular activities C2U40_RS22360 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U40_RS22360 SM00866 C2U40_RS22360 C2U40_RS22375 SM00354 helix_turn _helix lactose operon repressor C2U40_RS22395 SM00382 ATPases associated with a variety of cellular activities C2U40_RS22400 SM00382 ATPases associated with a variety of cellular activities C2U40_RS22405 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS22415 SM00450 Rhodanese Homology Domain C2U40_RS22450 SM00357 Cold shock protein domain C2U40_RS22450 SM00382 ATPases associated with a variety of cellular activities C2U40_RS22450 SM00959 Rho termination factor, N-terminal domain C2U40_RS22460 SM00487 DEAD-like helicases superfamily C2U40_RS22460 SM00490 helicase superfamily c-terminal domain C2U40_RS22485 SM00052 Putative diguanylate phosphodiesterase C2U40_RS22485 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2U40_RS22485 SM00091 PAS domain C2U40_RS22485 SM00267 diguanylate cyclase C2U40_RS22495 SM01004 Delta-aminolevulinic acid dehydratase C2U40_RS22605 SM00421 helix_turn_helix, Lux Regulon C2U40_RS22610 SM00487 DEAD-like helicases superfamily C2U40_RS22655 SM00382 ATPases associated with a variety of cellular activities C2U40_RS22675 SM00420 helix_turn_helix, Deoxyribose operon repressor C2U40_RS22675 SM01134 C2U40_RS22675 C2U40_RS22680 SM00448 cheY-homologous receiver domain C2U40_RS22680 SM00862 Transcriptional regulatory protein, C terminal C2U40_RS22685 SM00387 Histidine kinase-like ATPases C2U40_RS22685 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS22710 SM00382 ATPases associated with a variety of cellular activities C2U40_RS22750 SM00470 ParB-like nuclease domain C2U40_RS22765 SM01228 C2U40_RS22765 C2U40_RS22780 SM00382 ATPases associated with a variety of cellular activities C2U40_RS22785 SM00382 ATPases associated with a variety of cellular activities C2U40_RS22810 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS22815 SM00857 Resolvase, N terminal domain C2U40_RS22915 SM01234 C2U40_RS22915 C2U40_RS22930 SM00382 ATPases associated with a variety of cellular activities C2U40_RS22940 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS22940 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C2U40_RS22945 SM00382 ATPases associated with a variety of cellular activities C2U40_RS22945 SM00760 Bacterial dnaA protein helix-turn-helix domain C2U40_RS22950 SM00480 DNA polymerase III beta subunit C2U40_RS22960 SM00387 Histidine kinase-like ATPases C2U40_RS22960 SM00433 TopoisomeraseII C2U40_RS22995 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS23005 SM00448 cheY-homologous receiver domain C2U40_RS23005 SM00862 Transcriptional regulatory protein, C terminal C2U40_RS23010 SM00387 Histidine kinase-like ATPases C2U40_RS23010 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS23040 SM00091 PAS domain C2U40_RS23040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS23040 SM00387 Histidine kinase-like ATPases C2U40_RS23080 SM00458 Ricin-type beta-trefoil C2U40_RS23100 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2U40_RS23100 SM00954 Region found in RelA / SpoT proteins C2U40_RS23105 SM01409 C2U40_RS23105 C2U40_RS23110 SM00072 Guanylate kinase homologues. C2U40_RS23125 SM00267 diguanylate cyclase C2U40_RS23170 SM00267 diguanylate cyclase C2U40_RS23220 SM00421 helix_turn_helix, Lux Regulon C2U40_RS23220 SM00448 cheY-homologous receiver domain C2U40_RS23225 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS23225 SM00387 Histidine kinase-like ATPases C2U40_RS23225 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS23225 SM00448 cheY-homologous receiver domain C2U40_RS23235 SM00387 Histidine kinase-like ATPases C2U40_RS23240 SM00448 cheY-homologous receiver domain C2U40_RS23240 SM00850 LytTr DNA-binding domain C2U40_RS23255 SM01001 AIR carboxylase C2U40_RS23285 SM00360 RNA recognition motif C2U40_RS23310 SM00881 CoA binding domain C2U40_RS23390 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain C2U40_RS23390 SM01232 C2U40_RS23390 C2U40_RS23440 SM00354 helix_turn _helix lactose operon repressor C2U40_RS23445 SM00829 Enoylreductase C2U40_RS23480 SM00563 Phosphate acyltransferases C2U40_RS23520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS23520 SM00387 Histidine kinase-like ATPases C2U40_RS23520 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS23525 SM00448 cheY-homologous receiver domain C2U40_RS23525 SM00862 Transcriptional regulatory protein, C terminal C2U40_RS23535 SM00971 Serine acetyltransferase, N-terminal C2U40_RS23560 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C2U40_RS23560 SM00474 3'-5' exonuclease C2U40_RS23560 SM00475 5'-3' exonuclease C2U40_RS23560 SM00482 DNA polymerase A domain C2U40_RS23605 SM00354 helix_turn _helix lactose operon repressor C2U40_RS23610 SM01038 Beta galactosidase small chain C2U40_RS23655 SM00829 Enoylreductase C2U40_RS23675 SM00382 ATPases associated with a variety of cellular activities C2U40_RS23695 SM01321 C2U40_RS23695 C2U40_RS23710 SM00326 Src homology 3 domains C2U40_RS23770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS23770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS23775 SM00831 Cation transporter/ATPase, N-terminus C2U40_RS23785 SM00342 helix_turn_helix, arabinose operon control protein C2U40_RS23805 SM00530 Helix-turn-helix XRE-family like proteins C2U40_RS23825 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C2U40_RS23825 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C2U40_RS23880 SM00257 Lysin motif C2U40_RS23900 SM01001 AIR carboxylase C2U40_RS23950 SM00729 Elongator protein 3, MiaB family, Radical SAM C2U40_RS23960 SM00382 ATPases associated with a variety of cellular activities C2U40_RS23960 SM00448 cheY-homologous receiver domain C2U40_RS23965 SM00091 PAS domain C2U40_RS23965 SM00387 Histidine kinase-like ATPases C2U40_RS23965 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS23975 SM01230 C2U40_RS23975 C2U40_RS24015 SM00487 DEAD-like helicases superfamily C2U40_RS24015 SM00490 helicase superfamily c-terminal domain C2U40_RS24020 SM00155 Phospholipase D. Active site motifs. C2U40_RS24045 SM00354 helix_turn _helix lactose operon repressor C2U40_RS24065 SM00450 Rhodanese Homology Domain C2U40_RS24110 SM00316 Ribosomal protein S1-like RNA-binding domain C2U40_RS24110 SM00732 Likely ribonuclease with RNase H fold. C2U40_RS24120 SM00448 cheY-homologous receiver domain C2U40_RS24120 SM00862 Transcriptional regulatory protein, C terminal C2U40_RS24125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS24125 SM00387 Histidine kinase-like ATPases C2U40_RS24125 SM00388 His Kinase A (phosphoacceptor) domain C2U40_RS24135 SM01403 C2U40_RS24135 C2U40_RS24155 SM01382 C2U40_RS24155 C2U40_RS24155 SM01383 C2U40_RS24155 C2U40_RS24170 SM00322 K homology RNA-binding domain C2U40_RS24190 SM01374 C2U40_RS24190 C2U40_RS24260 SM00363 S4 RNA-binding domain C2U40_RS24260 SM01390 C2U40_RS24260 C2U40_RS24265 SM00662 RNA polymerases D C2U40_RS24340 SM00822 C2U40_RS24340 C2U40_RS24435 SM00062 Bacterial periplasmic substrate-binding proteins C2U40_RS24440 SM00155 Phospholipase D. Active site motifs. C2U40_RS24475 SM00382 ATPases associated with a variety of cellular activities C2U40_RS24475 SM00962 SRP54-type protein, GTPase domain C2U40_RS24475 SM00963 SRP54-type protein, helical bundle domain C2U40_RS24480 SM00382 ATPases associated with a variety of cellular activities C2U40_RS24495 SM00947 Carbonic anhydrase C2U40_RS24500 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2U40_RS24500 SM00866 C2U40_RS24500 C2U40_RS24530 SM00052 Putative diguanylate phosphodiesterase C2U40_RS24535 SM00052 Putative diguanylate phosphodiesterase C2U40_RS24535 SM00267 diguanylate cyclase C2U40_RS24575 SM00857 Resolvase, N terminal domain C2U40_RS24690 SM00422 helix_turn_helix, mercury resistance C2U40_RS24710 SM00479 C2U40_RS24710 C2U40_RS24800 SM00857 Resolvase, N terminal domain C2U40_RS24895 SM00857 Resolvase, N terminal domain C2U40_RS24905 SM00670 Large family of predicted nucleotide-binding domains C2U40_RS24935 SM00422 helix_turn_helix, mercury resistance C2U40_RS24955 SM00479 C2U40_RS24955 C2U40_RS24965 SM00857 Resolvase, N terminal domain C2U40_RS24975 SM00422 helix_turn_helix, mercury resistance C2U40_RS25005 SM00670 Large family of predicted nucleotide-binding domains C2U40_RS25015 SM00857 Resolvase, N terminal domain C2U40_RS25025 SM00857 Resolvase, N terminal domain C2U40_RS25125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS25125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS25140 SM00670 Large family of predicted nucleotide-binding domains C2U40_RS25150 SM00857 Resolvase, N terminal domain C2U40_RS25205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2U40_RS25205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2U40_RS25365 SM00052 Putative diguanylate phosphodiesterase C2U40_RS25430 SM00470 ParB-like nuclease domain C2U40_RS25460 SM00480 DNA polymerase III beta subunit C2U40_RS25465 SM00470 ParB-like nuclease domain C2U40_RS25470 SM00487 DEAD-like helicases superfamily C2U40_RS25515 SM00528 Domain in histone-like proteins of HNS family C2U40_RS25565 SM00020 Trypsin-like serine protease C2U40_RS25740 SM00327 von Willebrand factor (vWF) type A domain C2U40_RS25935 SM00422 helix_turn_helix, mercury resistance