C2U40_RS00010 NONE
        merP NONE
C2U40_RS24730 NONE
C2U40_RS24995 NONE
C2U40_RS00015 NONE
C2U40_RS25150 NONE
C2U40_RS24560 NONE
C2U40_RS00020 NONE
C2U40_RS00025 NONE
C2U40_RS24735 NONE
C2U40_RS24565 NONE
C2U40_RS00030 NONE
C2U40_RS24740 NONE
C2U40_RS24745 NONE
C2U40_RS24750 NONE
C2U40_RS00035 NONE
C2U40_RS24755 NONE
C2U40_RS24570 NONE
C2U40_RS25015 NONE
C2U40_RS00040 NONE
C2U40_RS24575 NONE
C2U40_RS24765 NONE
C2U40_RS24770 NONE
C2U40_RS00045 NONE
C2U40_RS24580 NONE
C2U40_RS24775 NONE
C2U40_RS24585 NONE
C2U40_RS24590 NONE
C2U40_RS00050 NONE
C2U40_RS25030 NONE
C2U40_RS00055 NONE
C2U40_RS24595 NONE
C2U40_RS00060 NONE
C2U40_RS24600 NONE
C2U40_RS25035 NONE
C2U40_RS00065 NONE
C2U40_RS00070 NONE
C2U40_RS25205 NONE
C2U40_RS25040 NONE
C2U40_RS00075 NONE
C2U40_RS25045 NONE
C2U40_RS25210 NONE
C2U40_RS00080 NONE
C2U40_RS00085 NONE
C2U40_RS25215 NONE
C2U40_RS25220 NONE
C2U40_RS24815 NONE
C2U40_RS25225 NONE
C2U40_RS25230 NONE
C2U40_RS25235 NONE
C2U40_RS24820 NONE
C2U40_RS00090   17937 ..   17958 +  -5.1  -4.83615   GCGTTTGTCGGCTTG           TGCGGGTGA GTGA TGACTCGCA            TTTTTGTCGCGCCTG  80 95
C2U40_RS24835 NONE
C2U40_RS25075 NONE
C2U40_RS00095 NONE
C2U40_RS24840 NONE
C2U40_RS25080 NONE
C2U40_RS00100 NONE
C2U40_RS24845 NONE
C2U40_RS24660 NONE
        mreD NONE
C2U40_RS24665 NONE
C2U40_RS24670 NONE
C2U40_RS00110 NONE
C2U40_RS24855 NONE
C2U40_RS25085 NONE
C2U40_RS25090 NONE
C2U40_RS24675 NONE
C2U40_RS00115 NONE
C2U40_RS24680 NONE
C2U40_RS24860 NONE
C2U40_RS24865 NONE
C2U40_RS24870 NONE
        merR NONE
C2U40_RS24875 NONE
C2U40_RS24695 NONE
C2U40_RS24880 NONE
C2U40_RS25255 NONE
C2U40_RS24885 NONE
C2U40_RS25260 NONE
C2U40_RS24700 NONE
C2U40_RS24705 NONE
C2U40_RS25265 NONE
C2U40_RS24900 NONE
C2U40_RS24710 NONE
C2U40_RS00120 NONE
C2U40_RS24905 NONE
C2U40_RS00125 NONE
C2U40_RS25270 NONE
C2U40_RS25275 NONE
C2U40_RS00130 NONE
C2U40_RS25280 NONE
C2U40_RS25130 NONE
C2U40_RS00135 NONE
C2U40_RS24910 NONE
C2U40_RS24965 NONE
C2U40_RS25285 NONE
        merR NONE
C2U40_RS25290 NONE
C2U40_RS24940   32166 ..   32186 +  -2.6  -3.82946   CTGTGGTCGTAAGCT           GG-TGTGAC TGTC GTCATATCC            TTATGTTTCCCATCG  54 321
C2U40_RS25295 NONE
C2U40_RS24945 NONE
C2U40_RS00155 NONE
C2U40_RS24950 NONE
C2U40_RS25300 NONE
C2U40_RS25305 NONE
C2U40_RS24955   34502 ..   34536 + -10.6  -3.01791   CGGCAGGGGCCGGCA     GCAGTGTCAGCAGGCC GGC GGCCAGTTGTTGCTGC     TGTTGCAGCCCCAGT  62 227
C2U40_RS25315 NONE
C2U40_RS25320   37303 ..   37320 +  -4.7  -2.67981   AGCAGTTGCAACAGG             CGGGCCG GTTC CTGCTCG              TGAGTTTGCTGCAGT  45 100
C2U40_RS25325   37931 ..   37950 +  -5.7   -3.0395   GCAGGTCGATGTCGT            GGCGCAGC GGGTA GCTG-GCC            TCTTGAACGCTCTGT  50 47
C2U40_RS25330 NONE
C2U40_RS25335   39342 ..   39367 +  -8.9  -2.77895   CCCCGCCCGCAGCGC         CTGCCAACGGG TGAC CTCGTCGGCGG          ATTCTTCCGCCTCAG  60 310
C2U40_RS25340 NONE
C2U40_RS25345 NONE
C2U40_RS25350 NONE
C2U40_RS00185 NONE
C2U40_RS25355 NONE
C2U40_RS25360 NONE
C2U40_RS00195 NONE
C2U40_RS25365   42320 ..   42333 +  -3.7  -3.24825   GGTCGTAGACCACCT               CCGCC TGCG GGCAG                TGTTGCTTCACCTCC  47 88
C2U40_RS25370 NONE
C2U40_RS25375   43266 ..   43278 +  -6.9  -3.04144   GCCGATGGCCTGGGC                GGCGT TGA GCGCC                TCTTCCAGATCGCCA  56 101
C2U40_RS00215   45340 ..   45356 + -15.1  -4.77036   TGATTTCATTGACCG              GGGCCGC ACT GCGGCCC              TTTTTCATGGTGACA 100 47
C2U40_RS00220   46035 ..   46054 +  -7.8  -2.91264   GGAGTGAGACAAAGA            GGCCGC CGTGAGTT GCGGCC             TGTCTGCATCGGGCG  58 103
C2U40_RS00230   48058 ..   48068 +  -8.2  -3.61715   CGGCGACTCAGTAGT                 GGCC GCT GGCC                 TTCTTGGCGGCGGTG  69 70
C2U40_RS25405 NONE
C2U40_RS25410 NONE
C2U40_RS00240   53259 ..   53302 + -11.1  -3.54741   ATCCTGGATGAACAA CGGCGGCATCCTGTACTGG GGGACAGA CCAGT-CTGG-TGCCGCCG TTTGACAAGCTAGTG  78 70
C2U40_RS00245   54378 ..   54399 + -17.3  -3.68366   CACCACTCCATCATA           CAGGGCGCC TTCG GGCGCCCTG            TTGCTTTTGGGCTGA 100 53
        brnQ   56116 ..   56144 + -11.8   -4.7254   TGGTGGCTGAAACAA       TGAACAAGGCGCC CTCG GGCGCCTTGT-CG        TTTTTACTCCCGCAT 100 68
C2U40_RS25425 NONE
C2U40_RS00265 NONE
C2U40_RS25430 NONE
C2U40_RS25435 NONE
C2U40_RS00270   60943 ..   60959 + -15.1  -4.17309   GTGGTGGTAATAGAA              CCGGGCC TCT GGCCCGG              TTGTTGTTTGTACTG 100 50
C2U40_RS00275 NONE
C2U40_RS00280 NONE
C2U40_RS00285 NONE
        thiS   66043 ..   66053 +  -2.4   -3.4997   GCTCTGCCTTGCGGC                 GGAG CCT CACC                 TCTTCTTATCGCTGT  47 71
C2U40_RS00295 NONE
C2U40_RS00300   68103 ..   68118 + -11.8  -2.61695   CTTCTTGGGCCGATA              GGGGCG GCCA CGCCCC               CTCTTTGCCGGTGGC  73 25
C2U40_RS00305   70559 ..   70581 +  -4.9  -5.22943   TTGCAACAAAAACAT           GCCTGAT TATACAAGT ATCAGGC           TTTTTTGCATTTCAT  87 96
C2U40_RS00320   72048 ..   72058 +  -8.2  -4.13246   TGGTGGGCACATCGA                 CCCC GCC GGGG                 TTTGTCTCTAGCATA  77 130
C2U40_RS00325 NONE
C2U40_RS25475   73674 ..   73689 +  -5.4  -3.73872   TGTGCGCAGATCTAT              GCC-GAG GTG CTCTGGC              TTATTCCATCTTCCT  61 31
C2U40_RS00345   76117 ..   76129 +  -4.7  -4.71186   TTTCAACGATGGTAG                CGTGG CAT CCCCG                TTTTCTCTTGGTGAT  72 333
C2U40_RS25485 NONE
C2U40_RS25490 NONE
C2U40_RS25495 NONE
C2U40_RS00350 NONE
C2U40_RS25500   78225 ..   78242 +  -4.9  -3.12378   TGTTCTGGGGGTCGT             TGAGTTGC GCG GCAAC-CA             TTCCCTGATGTCCTT  48 401
C2U40_RS25505 NONE
C2U40_RS00360 NONE
C2U40_RS00365   79794 ..   79814 +  -4.6  -4.18494   AACAGATAGATGCCA           CCCGC-CTC GCCG GTGCGCGGG            TTTTCGGTCCAGATC  65 157
C2U40_RS00375   80419 ..   80431 +  -2.6  -3.14132   GCGACGAGCCCCATC                TCGG CGAGC CCGG                TTAATCCCGCGCCGG  43 9
C2U40_RS25510   81652 ..   81686 +  -7.2  -3.75153   CCCCCCATTCAGCCT    TGAGTG-GGGAGGGA TCGGCC TCCCTCCCATCCTCA     TTTCCCTTAGCGGGC  66 458
C2U40_RS25515 NONE
C2U40_RS25520   83159 ..   83172 +  -3.1  -3.65351   TGTGCCCGCCACATA               GC-TGG CAG CCACGC               TTTCGCTCAGGGTGA  51 34
C2U40_RS25525   83474 ..   83492 +  -8.8  -4.02817   AAAGCCGGCCCAGGC             GTGGATGC GGC GCACCCAC             TTGTTGTTGTGCAGG  77 17
C2U40_RS25530   84313 ..   84331 + -10.2  -2.94045   GCGCGGGCTCAGGCT             GGTGACCG AGA CGGTCTCC             TCCTTGTTGAGGTCG  68 142
C2U40_RS25535   87040 ..   87076 +  -6.6  -3.61089   CAGGGTGTAGTAGTC   GATGGAGTCATAGTCGGC CTT GCCGTCT-TG-CTCCACC   TTCTGCTTGTTCCAC  63 468
C2U40_RS25540 NONE
        glpX NONE
C2U40_RS00420 NONE
C2U40_RS25545   89965 ..   89975 +  -5.4  -3.28924   CATCGACGCCAGGTT                 GATC CTG GATC                 TTCTGCAGCAGGGTC  54 2
C2U40_RS25550   91031 ..   91044 +  -3.8  -3.31144   AGTTGAACTGGATCT               GCTC CCCCTT GAGC                TTGTCCAGCTCGGAC  49 33
C2U40_RS25555   91539 ..   91559 +  -5.3  -2.78384   GAGCGCCTTGATGCG            CTCGTCGGC ATT GCCGAGCAG            TGTGATGGCGGAGAC  48 8
C2U40_RS25560   92607 ..   92640 +  -6.6  -3.53012   GCCTGGGGCAGCAGT     TCG-GGCAGGCGGTG CAGTT CGCTGCCCGCCACGG     TTTCCAACAGCGGGC  61 507
C2U40_RS25565 NONE
C2U40_RS25570 NONE
C2U40_RS00445 NONE
C2U40_RS25575   96748 ..   96765 +  -8.3  -3.65224   CACTCGGGGGAGAGC             CCGGCCG CCTC CAGCCGG              TTCTTGGCGTCCCAT  69 47
C2U40_RS25580 NONE
C2U40_RS25585 NONE
C2U40_RS25590 NONE
C2U40_RS25595 NONE
        lysA NONE
C2U40_RS25600 NONE
C2U40_RS00465 NONE
C2U40_RS00470 NONE
C2U40_RS25605 NONE
        xerC NONE
C2U40_RS00480 NONE
C2U40_RS25610 NONE
C2U40_RS25615 NONE
C2U40_RS00495 NONE
C2U40_RS25620  106489 ..  106504 +  -4.6  -3.79849   GTGCTCGGCCAGGGC              GGCGAC GCCG GTCCCC               TTGTTGCTCTGCTTG  58 369
C2U40_RS25630 NONE
C2U40_RS25635 NONE
C2U40_RS00515 NONE
C2U40_RS25640 NONE
C2U40_RS00520 NONE
C2U40_RS25645 NONE
C2U40_RS00525  112277 ..  112310 +  -6.5  -3.03124   GGTAAGAACCTGGCT     GCTGGCTGCTGGCTG CTGG CTGCTGGCTGCTGGC      TGTTAGCGGCTGGCG  53 53
C2U40_RS25665  114550 ..  114576 +  -8.6   -3.6502   ATCCGGCGCCTCTAC         CGGCTGAGCCTG GAT CTGGTTCAGCGG         TTTGGGTGGGGCGTC  69 156
C2U40_RS00540  116342 ..  116360 +  -2.2  -3.18264   GGGTCAGCAGCAGCT             GGCCATCG ACG CGGGGGAC             TTCCTGGCTCCAGAA  43 501
C2U40_RS00550 NONE
C2U40_RS25680  117565 ..  117578 +  -2.4  -3.72051   AACAGGGTGTCCTTC               CAGT ATTCGG ACTG                TTTCGCCTTCTTGAA  52 307
C2U40_RS25685 NONE
C2U40_RS25690 NONE
C2U40_RS00560 NONE
C2U40_RS25695 NONE
C2U40_RS25700 NONE
C2U40_RS00565 NONE
C2U40_RS25705 NONE
C2U40_RS00570  123538 ..  123556 + -12.4  -4.72272   GGTTGGCAACAAAAA             GGGCTCCG TGA TGGAGCCC             TTTTTCGTGGGGGAG 100 45
C2U40_RS25710 NONE
C2U40_RS25715 NONE
C2U40_RS00585 NONE
C2U40_RS00590 NONE
C2U40_RS25720 NONE
C2U40_RS25725 NONE
C2U40_RS00595  127305 ..  127324 + -13.6  -3.75153   GCTGACGAAATAAAA            GAGGCTCC CCTG GGAGCCTC             TTTGCGTTGGCGAGC 100 49
C2U40_RS25730  128574 ..  128605 +  -5.8  -3.62591   TAGGCGAAGAAGGCC      TTGGGCATCGGCACT TCC AGC-CCGTTGCCCAG      TTTCCAGATTGTGCC  60 137
C2U40_RS00605 NONE
C2U40_RS25740 NONE
C2U40_RS00615 NONE
C2U40_RS25745  132028 ..  132042 +  -3.4  -3.86346   CGTTTTGCGTGGTGT               CGCCGG GCA CTGCCG               TTTATCCGGCGCTGC  55 31
C2U40_RS25750 NONE
C2U40_RS00635 NONE
C2U40_RS00640 NONE
C2U40_RS25760 NONE
C2U40_RS00645  137414 ..  137433 +   -15  -5.54338   GCAGTATCAAAGCAA            GGGGCCCA GATA TGGGCCCC             TTTTTATTTTGGTTA 100 46
C2U40_RS25765  138410 ..  138429 +  -8.6  -2.50492   CGGTCAGCGCCAGCG            CC-GGATCC ACC GGATCCAGG            ATGTTGGTCATGGTG  58 13
C2U40_RS00665 NONE
C2U40_RS00670  140488 ..  140517 + -23.7  -3.03124   ACCGACCCCTCAATA       GCAGAGACCCGCC TGTT GGCGGGTCTCTGC        TATTGAGGGGTCGGC 100 52
C2U40_RS25795 NONE
C2U40_RS25800  144647 ..  144658 +  -2.2  -4.17048   CAACTGTGATCAACG                TCTC GTTT GAGG                 TTCTTTTGCCAAGCG  58 78
C2U40_RS25805  146272 ..  146283 +  -3.6  -4.62203   GGAACTGCCCCTGAT                GCGG TGTG CTGC                 TTTTGCTTATTTAAA  70 312
C2U40_RS00690  147023 ..  147066 +  -9.1  -3.86252   TAGAGTGCCTTAACG TGTGATCAGGGTTGTGGTGGT GCGA GCCACCACAACC-TCA-CACA TTCTGTTTCCTCACA  78 41
C2U40_RS00695 NONE
C2U40_RS25815 NONE
C2U40_RS25825 NONE
C2U40_RS00700 NONE
C2U40_RS00705 NONE
C2U40_RS25835 NONE
C2U40_RS00710 NONE
C2U40_RS00715 NONE
C2U40_RS25845  153278 ..  153315 +  -3.3  -3.92996   CGGATCTGGGGCGCA   TTGGCTGGTGCCATCTGA TTA TCCGCGGGCA-CGGCCGA   TTCTTCTGTCTCGCC  56 292
C2U40_RS25855 NONE
C2U40_RS25860  155639 ..  155661 +  -6.9  -3.17075   GTACCAGGGCGCGCA           GCTGGGGGA TGGGC TCCCACGGC           TTGCCTTGGGCCAGC  57 175
C2U40_RS25875  158140 ..  158176 + -10.1  -3.61715   CAGCGCGTCCTGGGT    CGGCACCGGCAGCAT GCGAAAG ATGCTGCCGCCGTCG    TTGTTGAGCAGGATC  70 219
C2U40_RS00755  162163 ..  162182 + -12.8   -5.1963   ATCGGCTAGGCAGAA            GGGCTCCC GGAC GGGGGCCC             TTTTTGTTGGTTGGG 100 55
C2U40_RS00760 NONE
        aadB  163094 ..  163112 +  -8.8  -2.82635   ATGCCGTCGTGCTCG             CCGCCATG CCC CATGGCGC             TGTGGTCGTGGGCCT  60 181
        cmlA NONE
C2U40_RS00770 NONE
        catB NONE
C2U40_RS25910 NONE
        qacE NONE
C2U40_RS25920  166706 ..  166730 +  -8.7  -4.73448   AGAAAGCTGTGAAAA          TAACCCATTCA GAC TGAATGGCTTA          TTTTTAACTATATGT  93 152
C2U40_RS25930 NONE
C2U40_RS00785  168167 ..  168192 + -17.7  -5.00616   CCGCTCTCACCATGA         CAAACCCCTGC CTCG GCAGGGGTTTG          TTTTTTGGGGCGACA 100 50
        merP  168936 ..  168966 +  -5.2  -3.04792   GTCAGGATCACCACG       GCCGCATGGACGCC GAC GGCGGCCATCAGGG       TGTTGGCAATGATGC  50 22
C2U40_RS25955  169414 ..  169428 + -12.8  -2.84134   AGGGCCGGCAGGAGA               CCGGCC CAT GGCCGG               ATTATTCGTCGATCT  78 280
C2U40_RS00810 NONE
C2U40_RS00815  171905 ..  171920 + -10.4  -5.03314   ACCGGAATGAGAAAA              GGCTCC CGCG GGAGCC               TTTTTTGAGCCTGCC 100 31
C2U40_RS00875  185692 ..  185702 +  -8.2  -3.40299   ATGGCGGCCCTTCTG                 CCCC GAA GGGG                 TTATGCCTGTCGTGC  65 112
C2U40_RS00880 NONE
C2U40_RS00885  188574 ..  188592 +   -16  -4.72272   ATGGCAATAAAAAAA             GCCCTCGC ACT GCGAGGGC             TTTTTCATGGGCGGA 100 53
        gspC NONE
        gspD NONE
        gspE NONE
        gspF  202109 ..  202124 +    -9  -2.96695   TAACAATTTATCGTT              GATGGC TCAT GCCATC               TCATTTCGTGAGGGA  65 139
        gspG  202614 ..  202639 +    -9  -3.31792   TCACCGAGTCATCCC         GAGGCTGCCT GAATGA AGGTGGCCTC          TTCTGCCCGTCGTCA  69 61
        gspH NONE
        gspI NONE
        gspJ NONE
C2U40_RS00975 NONE
        gspL NONE
C2U40_RS00985  207144 ..  207176 +  -2.6  -3.60627   CCCAATGAAACAACG     CGTCCCGAGCAGG GCTATATG CCTGAGCGGG-CG      TTTGCAGTCGAGTCG  49 33
C2U40_RS00990  207982 ..  208013 + -24.6  -3.29511   TGAGCTGGCAAGCAT      CAACACCACCCCGC CCCG GCGGGGTGGTGTTG       TTATGGGGGCGTGCC 100 54
C2U40_RS01000  210286 ..  210303 + -12.7   -5.0065   ACCCGGGATCGACAA             GGGCTGC CTGG GCAGCCC              TTTTGTTTATCCGTC 100 44
C2U40_RS01010  211850 ..  211867 +  -4.7  -3.64703   GCGGAGCAGGCAGAG             TAGCCCG CAGA CGGGCAG              TTTGAATACAGAGGA  55 23
        cysQ  212728 ..  212759 + -24.6  -3.29649   AGGTCATCATTGACG      GCAATCAGGCGGCC CCAT GGCCGCCTGATTGC       TTGGTGTGATCCGCT 100 51
C2U40_RS01020  214411 ..  214436 + -19.1  -3.52102   ACCAGCCGCAAAAGA         GAGAGGCGACC CCAG GGTCGCCTCTC          TTGTATCGGTCAGGT 100 50
        metB NONE
C2U40_RS01045  219898 ..  219916 +   -16  -5.38549   AGTCGTTCAGTCAAA             GAGGCGCC AGT GGCGCCTC             TTTTTATTGTTTAGC 100 50
C2U40_RS01060  225779 ..  225789 +  -8.2  -2.91144   GTTTGGATTTGAACC                 GGCC ACC GGCC                 TGATTTAAGGACTCA  61 7
        argB NONE
C2U40_RS01070 NONE
C2U40_RS01075  228858 ..  228876 +   -16  -3.52102   TCCGCTGGTACCAAA             GAGGGGGC ATT GCCCCCTC             TTGTATCAATGGGGT 100 56
C2U40_RS01080  230620 ..  230635 + -10.4  -5.59879   GCCGAATGAAACGAA              GAGGGC TCAG GCCCTC               TTTTTTATGTTTATG 100 48
C2U40_RS01085  231392 ..  231411 +  -7.8  -4.81083   CTGGCCAGACAAAAA            CGGCAACC TTCA GGTTGCCA             TTTTTCATGGTTCCA  90 57
C2U40_RS01115  235900 ..  235918 +  -2.2  -3.05935   CAGCCGGGTCGCTAA             GCGGCCGG CCA TCGCCCAC             TTAACTGGCCCCTGT  42 26
C2U40_RS01120  236641 ..  236664 + -11.2  -5.81622   GACGCTCCATTTTTA          GGTCTTTTAT TTAT ATAAAAGACC           TTTTTTTCATTTTAT 100 135
        cysT NONE
        cysW NONE
C2U40_RS01135  239788 ..  239810 +  -3.3  -2.74784   AGGCCCCGACCGGCC           GGTCAGCGC AGGAG GCGATGACG           TGAATTTTCAGCAGT  41 180
C2U40_RS01140  240777 ..  240797 + -18.3  -4.65078   GTGCATCAGAGAAAA            CGGGGAGCC AGT GGCTCCCCG            TTTTGTTGAGGGTGT 100 45
C2U40_RS01155  246537 ..  246562 + -19.1  -4.25104   GAACATGCGTTATGT         CAGACCCCTGC CGCG GCAGGGGTCTG          TTTTCATGGGAAGGA 100 54
C2U40_RS01160  247443 ..  247459 +  -7.9  -3.31461   TGAGCGCCACCAGCA              GCTGGCG GCC CGGCAGC              TTGTGGCCGTCGATC  58 92
C2U40_RS01175 NONE
C2U40_RS01180  251947 ..  251985 + -26.1  -3.05022   GCAGCCGGCCTGATG   CAACAAGGGCGCCCCGC AACAG GCGGGGCGCCCTTGATG   TCTGTCTGTCAGAGG 100 28
C2U40_RS01190  255962 ..  255989 + -13.4  -5.02476   AGCCCTGACTCTCTG        CAGTGCGCCACC TCCG GGTGGCGTTCTG         TTTTTTGGGCCCTCT 100 33
C2U40_RS01195 NONE
C2U40_RS01200  257180 ..  257212 +   -15  -3.40071   AGGCCCGTGATCTTG      CATGGCGGATGTCT TCATT GGATATCCGCCATG      TTGTGAATGTCACTT 100 39
C2U40_RS01205  258827 ..  258864 +  -6.7   -3.4252   GCGGCAGGAGGGCAG   GGGCGGCGCGCGCCGCG ACGG TGAGTCGCTGGCTGCCC    TTCTCCTGCGTGGAC  61 43
        yjjW  259755 ..  259783 +  -3.8   -5.1675   CTACAAGGCAAGATT       G-GACGGCGAACC GAGC GGTTCGGCGTGGC        TTTTTTGCTGCCTGA  79 82
C2U40_RS01215  260304 ..  260314 +  -8.2  -3.21276   GCTGGCGGAACCAGC                 GCCG GGC CGGC                 TCTTCTCCGGCGGGG  58 115
C2U40_RS01235  263996 ..  264021 + -19.1  -5.04597   GGCCGCCCGCAACAG         CAGGAAGGGGC CAAG GCCCCTTCCTG          TTTTTCTGTCTCAGT 100 53
C2U40_RS01245  268851 ..  268876 + -16.1  -5.34309   GAGAGAGTAAGCAAA         GCGCGACTGCC GACC GGCAGCCGCGC          TTTTTCTTTGCTCGT 100 115
C2U40_RS01255  272100 ..  272126 + -25.2  -5.64274   GCAGACTGACAATAA         TCCCGCCGGGGC ATG GCCCCGGCGGGA         TTTTTTTATGGGTGG 100 45
C2U40_RS01265  274489 ..  274511 +  -2.7    -3.727   GATGGACTGCCCGCT          TGGGCAGTACC AAA GG-AC-GCCCG          TTTCACTATGCTCCA  53 158
C2U40_RS01270  276064 ..  276079 + -11.8  -5.18726   GCGGGAAAATGCGAA              GGGCCC TGAC GGGCCC               TTTTTCTTGTAGGGG 100 43
C2U40_RS01305 NONE
C2U40_RS01310 NONE
C2U40_RS01315  286001 ..  286018 + -11.3  -5.33848   TGCCCGAAACACCTT             GCCGATC AGAT GATCGGC              TTTTTTCATTATCCT 100 115
C2U40_RS01320  286703 ..  286714 +  -3.6   -2.9294   GGGTGAACCGGCCGG                CGTG CCCG CGCG                 TATGTCACTCATCTG  45 43
C2U40_RS01325  287294 ..  287323 +  -3.4  -3.89956   TAGGCCTACCCCGCT       GCGGGCTGCTCT GGAATA ATGGAGGCCCGC        TTTCCTATCTGGTAA  55 38
C2U40_RS01330  288433 ..  288453 +  -6.7  -2.66695   TGCAGTGGCGAGGCC            GGGAGCGCA GAA TCCGCGCCC            ATCTTTCGTCCCACC  52 159
C2U40_RS01335  289710 ..  289725 + -11.8  -5.24531   CACCTTCCGGTCAGA              GCCCGC TTCG GCGGGC               TTTTTTGTGGCCGCT 100 57
C2U40_RS01350  291555 ..  291582 + -21.4  -4.41348   GATTGACTCCATGGT        GGGGCCGGATAG GATT CTATCCGGCCCC         TTTGTTTGAACAGGG 100 79
C2U40_RS01355  292717 ..  292745 +  -2.9  -2.98719   AAATTCGACTTGTAA        TTCAGATGGGGCC AAG GGCCCCATCAACC        TCTGTGGTCTCATGA  43 26
C2U40_RS01360  294406 ..  294420 +  -9.2  -2.90075   ACCCTGGAATGTTGT               CCGGCC GCC GGTCGG               TCTGGTTCAAAAGAA  65 49
C2U40_RS01365 NONE
C2U40_RS01370  296523 ..  296540 + -12.7  -4.28254   CGCAGATAACAAAAA             TCCCGGC CTTG GCCGGGA              TTTTGCGTGTTGGCG  95 53
C2U40_RS01380 NONE
C2U40_RS01385 NONE
C2U40_RS01390 NONE
        artM  300099 ..  300138 +    -5   -5.2696   AGATCTACCTATTAA  TGGTGAGTGGAAGTGCAGG AAA TCTGTGCTTCCCCTC-CAA  TTTTTTGCATTTTCC  87 48
C2U40_RS01400  301254 ..  301271 + -12.7  -4.11281   CCGGATGGACAGCAA             GGGGAGC TTCG GCTCCCC              TTTGTCGTTATGGTG  95 46
C2U40_RS01405  302311 ..  302344 +  -5.1  -2.72031   ATCCGTGGGCCGGGA     GGAGCCGGCC-GCCGT GCC GTGACAGGCTGGCCCC     TCATCTGGTTATAGT  48 67
C2U40_RS01415  304156 ..  304172 + -13.7   -5.1615   GTGAGCAAGAAAAAA              GGCTGCC AGT GGCAGCC              TTTTTTCAATCTTCA 100 37
C2U40_RS01430  307978 ..  307998 + -14.7  -4.25104   TCATGCACACGTCAA            GGGCTCACC ATG GGTGGGCCC            TTTTCATGAGGCCGC 100 51
C2U40_RS01435  308367 ..  308380 +  -3.7  -3.14132   AAGCTGATCAAAGAC               GCTGC CAAA GCTGC                TTAATCAGCCAAACG  47 8
        rimM  308920 ..  308930 +  -3.2  -3.87815   AAGTTGATTGGGATC                 CTGG TTT CTAG                 TTTCTCGCGCTAACA  55 15
        trmD NONE
C2U40_RS01450  310149 ..  310167 +   -16  -5.37043   GACAGGTAGTGAAAA             GGCTCGCC AAT GGCGAGCC             TTTTTTGTATCCGCT 100 80
C2U40_RS01470 NONE
C2U40_RS01475  314833 ..  314845 +  -4.9  -2.60808   CAAAACGAAACAGAC                TGATT GAT AATCA                TGCCTTGTCCCTGCT  45 19
C2U40_RS01480 NONE
C2U40_RS01485  316533 ..  316549 + -10.8  -5.28176   CCATCTGATGTGAAA              GGCGCC CATGA GGCGCC              TTTTTTATGCATAAA 100 33
        nhaA NONE
C2U40_RS01495 NONE
C2U40_RS01500  319247 ..  319258 +  -2.2  -3.10597   CACCACGATTCAACC                GGCA ACCC TGTC                 ATTTTAAATCGACGG  42 7
C2U40_RS01505  319622 ..  319637 +  -7.5  -5.59564   AACAGAAATAAAAAA              CCGGC ACGAAG GCCGG               TTTTTTTAGCTTTGT 100 30
        mviN  321740 ..  321782 +  -8.4  -2.71268   CAATCAGAGCGGGAT GGCTGAAATC-GGGTCAGC AACAGG GCTGACCCAGAGTGCCGCC TGATATATAATCCGG  60 77
C2U40_RS01520 NONE
C2U40_RS01525 NONE
C2U40_RS01530 NONE
C2U40_RS01535  326610 ..  326621 +    -3   -3.4811   ATGACGAGGAAGCGG                TTCA CTGA TGAA                 TATTCTTCTGGCCAA  49 18
C2U40_RS01540  327592 ..  327611 + -13.6   -4.7254   GCCATGAGTGCCTGA            GCCACCTC CTGT GAGGTGGC             TTTTTCATGGGCGAT 100 65
C2U40_RS01545 NONE
        pilV  328724 ..  328740 +  -3.6  -2.80344   CCTGAGGACGGATCT              GTGAGC GGGCG GCGCAC              CTTGTTGCGTCAGGC  43 22
C2U40_RS01555 NONE
C2U40_RS01560 NONE
C2U40_RS01565 NONE
C2U40_RS01570  334298 ..  334312 +  -4.2  -3.61356   ACTGGTATTGGAAAC               CCGGAA CTC TTCCTG               TTTCAGCTGCATGCT  53 243
C2U40_RS01580 NONE
C2U40_RS01585 NONE
C2U40_RS01590 NONE
C2U40_RS01595  338934 ..  338954 + -18.3  -5.04733   ACCCCTTGAGCCTTG            GGCGCTGGC ACA GCCAGCGCC            TTTTCTTTATCATTC 100 32
C2U40_RS01600 NONE
C2U40_RS01605 NONE
C2U40_RS01610  341604 ..  341617 +  -8.1  -3.40522   GCAAGGATCAGCTCT               CCAGC GGGG GCTGG                TTCTGGTAACCAAAT  62 3
C2U40_RS01615  342179 ..  342197 +   -16  -4.68593   GGCAAACATGAAAAA             GGCCGGTC AAT GACCGGCC             TTTTTGCGTGCTGAC 100 50
C2U40_RS01625 NONE
C2U40_RS01630 NONE
C2U40_RS01635  347086 ..  347097 +  -3.6  -3.02511   GAAATACACCCTGAT                CGTC GAAT GGCG                 TATTGCAAGCATACG  46 27
C2U40_RS01640 NONE
C2U40_RS01645  349098 ..  349121 +    -3  -3.61398   TATTAGCGTTCGCCA          CTCGAGCGGC TGTC GCTGATGGAG           TTGTTGCGCAAGCGG  51 226
C2U40_RS01650  350027 ..  350072 + -10.5  -3.19602   ACAGGCATCTTATGA GGCCGCTCTCTGTCATGGCCGG GCAAA CCGGCTATG-CTG-G-GCGGCC TGTTGCTATCGGAAC  74 76
C2U40_RS01655  350968 ..  350996 +  -8.2  -3.14132   GGGCCGGTCGGTCAG        GGAGTGACCC GGGTAGTGA GGGTCATTCC        TTCCTCACAGGAGGC  63 63
C2U40_RS01670 NONE
        rpsR NONE
C2U40_RS01680  354552 ..  354569 + -14.1  -5.79595   GCTTTTGCAGAAAAA             CCCGCGC ACTT GCGCGGG              TTTTTTATTTTCAGG 100 50
C2U40_RS01685  355382 ..  355395 +  -9.5  -2.88544   AGAGGAATGGACACA               GGGGC CTCG GCCCC                TGTGTCAGGGTAACG  65 39
C2U40_RS01695  357052 ..  357069 + -12.7  -5.06414   GGGAGTTGATCATCA             GGCCACC ACAG GGTGGCC              TTTTTATTGCCGCGC 100 32
C2U40_RS01705 NONE
C2U40_RS01710  358703 ..  358719 +  -4.4  -3.28368   TTATGCCCTGGTCTT              TCTGCT GGCCA GGCAGA              TCTTCTAGCTTCACT  51 1
C2U40_RS01715 NONE
C2U40_RS01720  363241 ..  363258 + -12.7  -5.45652   CCACTTCTGCTGCAA             GCCGCTC TTCG GAGCGGC              TTTTTTATTCGCGCT 100 47
C2U40_RS01725  364710 ..  364726 +  -9.4  -5.65927   GACAACCAGCAAAAA              GCCGCT CTTGA AGCGGC              TTTTTTATTTCCCTG 100 47
C2U40_RS01735  367490 ..  367502 +  -6.2  -3.15544   GAGAAACCAGGCCTC                GGCC TTGTT GGCC                TTGCTGCGGGTGAGG  51 222
C2U40_RS01750  370197 ..  370211 +  -3.4  -2.73364   TGTGGTAAGCCTGAT               CGGCGG AGG TCGCCA               TGCTTGAGATCGGCA  41 64
C2U40_RS01755  371890 ..  371912 +  -7.7  -2.88389   CTTTCCATATAGACA           GAAGGAGGT ATGAC ACCTCCTCC           GTATTTTAGTCTTAG  58 250
C2U40_RS01765  374935 ..  374948 +  -9.5  -3.16564   ATGCGGGCCGAGTAG               GGGGC GCAG GCCCC                TTGCTCGACTGCAAA  67 26
        prfC  376829 ..  376860 + -13.9  -4.79667   ACCCCGCCCAGGCGG      TAATGCCAGTCAG TTAAGC CTGACTGGCATTG       TTTTTACTAGGTTTT 100 77
C2U40_RS01780  378910 ..  378948 + -11.7  -3.18264   GACCCTGACCTTGGC  CTCGGCCAGTAGCGTGGC GCCC GCCAGGCT-CAGGCTGAG   TTGCTGGATGCGGCC  70 212
C2U40_RS01790  379823 ..  379842 +   -15  -4.46926   GACAGGCAAACAAAA            GGGCGGCA TCGC TGCCGCCC             TTTTATCCTGAGCTG 100 43
C2U40_RS01805  382815 ..  382844 + -20.9  -3.86346   TGCGCCGCCCAGAAA       CAACCATGGCTCC CGCG GGAGCCATGGTTG        TTTCTGGGGAGGTCA 100 41
        aguA  386112 ..  386126 + -11.4   -4.6955   AGTTAGTATTCAAAA               CCCCAC GCC GTGGGG               TTTTCTCTCTTGATG 100 183
C2U40_RS01830  387946 ..  387968 +  -8.4  -5.16237   TCAGGCACAAAGAGA           GAAGGAGGCA TCA TGTCTCCCTC           TTTTTTCGTCCAGTT  93 56
C2U40_RS01845  392088 ..  392101 +  -5.9  -3.85698   CGCACTAGAAGGAGG               CGCTC GGCC GGGCG                TTTCTGGCAGGGAGG  63 73
C2U40_RS01850  393519 ..  393548 + -16.7  -3.60792   CGGTTAGCCGAAAAA       TAAAAAAACGCCC GTGC GGGCGTTTTTTTA        TTTGGGGATTAACGG 100 48
C2U40_RS01895  401508 ..  401537 + -22.3  -3.44051   GTACACGGAGATAAA       GAGGGCAGGCATC GACG GATGCCTGCCCTC        TTGTCATGGTGCCCG 100 68
C2U40_RS01900  405176 ..  405193 + -14.1  -3.37796   TTACAGTCATGACAA             CGGGCGC CTTG GCGCCCG              TTGTGGATCCTGGCA  95 492
C2U40_RS01915  406674 ..  406688 +  -8.5  -2.63596   CACTTATCTTCATCA               GGCCC CTCGC GGGCC               TGATGTGCAATGAGG  59 42
C2U40_RS01920  407000 ..  407015 +  -3.2  -3.57561   CCGAGTGGCAAGAGG              CAGCAT CATG ACGCTG               TTTGCCGAATTGGGG  51 15
C2U40_RS01925  408148 ..  408161 +  -3.9  -2.91395   TCCCTGTTTTGCTCG               TTATC TGTG GATAA                GTTTGTACAAAAGCT  45 105
C2U40_RS01930 NONE
C2U40_RS01935  410173 ..  410194 +  -8.7  -3.05069   AGTTAGAGCAAAGAC           CTGATGCGC CTTG GCGTGTCAG            TGCTTGTTTGGTGAA  62 88
C2U40_RS01940  410408 ..  410436 + -14.1  -4.65747   TTGCTAACAAGAATG        CAGACATAAGCAT CAC ATGTTTATGTCTG        TTTTCTTCGGCCTTG 100 50
C2U40_RS01945 NONE
         rrf  413803 ..  413813 +  -2.4  -2.76189   AAAAAGCTAACCAGA                 CAGC GGA GCGG                 TAGTTCAGTCGGTTA  39 120
C2U40_RS01955  413895 ..  413914 + -13.6  -5.64006   GCCACTACTTAAGAA            GCCCAGTC TAAC GACTGGGC             TTTTTTTCGTTCGAT 100 37
C2U40_RS01960  414609 ..  414628 +  -4.9  -3.08774   AGCCCGGCAGGTGGA            GGGTGAC GATCAG GCCACCC             TCTTCACCATTTCTG  48 72
C2U40_RS01975 NONE
C2U40_RS01980  419983 ..  420005 + -13.4  -4.62069   CTCTGCGCGGGTTTT           CAACCGGGCC CCT GGCCCGGTTC           TTTTTCCCATGCGAA 100 185
C2U40_RS02010  426765 ..  426780 + -11.8   -4.4078   CATTCACTGACATCA              GGGCCC TGCG GGGCCC               TTTTCGTTGCCGCGC  95 63
C2U40_RS02020  429117 ..  429141 + -17.2  -2.59431   CGCGTTATCGCCATA          CAGAGCCCGC CCCGT GCGGGCTCTG          TGCATTGTGGGCCGC 100 52
C2U40_RS02025 NONE
C2U40_RS02030  430619 ..  430636 + -14.1  -3.37761   TAATAGATACAACAA             GGGGCGC CTCG GCGCCCC              TTCGGTTTATTCCCC  95 52
C2U40_RS02050  436330 ..  436340 +  -2.4  -5.02357   CCAGCTCTCAGCTCG                 GGGG GCG CCAC                 TTTTCTTTGCTTGTC  71 88
C2U40_RS02055  437048 ..  437071 + -16.8  -5.17576   TGTCGGAAGCAGAGT          GAAGGGTCGC CATA GCGACCCTTC           TTTTTTGCCTTGATA 100 48
C2U40_RS02060  440479 ..  440496 + -14.1  -4.73388   CCATGACCGACATCA             GGCCGCC TGCG GGCGGCC              TTTTTCATGGGCGTT 100 45
C2U40_RS02065  441448 ..  441476 +  -2.3  -2.62613   AGCCTGAGGGATGCA       AAGA-GGGGCGC TTGTTT GCGCCCCTTCAC        ATCTTTGCACTCCAA  38 34
C2U40_RS02070  442675 ..  442692 + -14.1  -4.25104   CAGCACACGGAACAA             CGGGGCC TGCG GGCCCCG              TTTTGCTGCCCGCGA 100 51
C2U40_RS02075  443739 ..  443752 +  -2.3  -2.80816   GGCCCGCGGTGAATT               TCAGG ATGC CCTGC                TGTCGTGAGTCAGCC  39 4
C2U40_RS02080  444823 ..  444841 +    -3  -3.60925   GGCCGCAGGCTGAGA             GCTTGCAC CGG GCGCAAGG             TTACTGTTTTTAACA  51 28
         pgk  446053 ..  446082 + -17.9   -4.0162   AAAGCCTAATTGACC       CGAGACGGGGGGC AAAA GCCTCCCGTTTCG        TTTATCATGTGCCCG 100 32
C2U40_RS02090  447272 ..  447289 + -14.1  -4.27316   TTGATTGCATGAAAA             GGCGCCC TGCG GGGCGCC              TTTTGCATTGCAGCA 100 55
C2U40_RS02095  448909 ..  448934 + -12.7  -3.31322   AGGGGATAGGGCGGA         TACCCAGGCCTG AGT CAG-CCTGGGTA         TTCTGGCCGGTTGCG  83 167
C2U40_RS02115  452145 ..  452180 + -11.3  -4.75404   CGGGCTTGTCCTCCC    CCA-GCACCATCATGC CCCTT GCATGATGGTGCCTTG    TTTTTCCTGCCGTTT 100 59
C2U40_RS02125  453624 ..  453653 + -15.7  -3.16676   CGCTGGCTGAAGGAG       GCCCTGCTGGCGC GGGC GCGCTAGCAGGTC        TCTTCGCTTACTCGG 100 2
C2U40_RS02135 NONE
C2U40_RS02140  455673 ..  455692 +  -5.6  -4.24342   AGCAGGTCGATGCGG            CGCTTGGC CCGG GCCAGACG             TTTGTTGGTACGCAC  67 352
        rpoE NONE
C2U40_RS02155 NONE
C2U40_RS02160  459485 ..  459497 +  -6.3  -3.06361   AGACAGTCATGTTCA                GATTG GGT CAATC                TCTGTCTAGTTAATG  53 70
C2U40_RS02165 NONE
C2U40_RS02170 NONE
        lepB NONE
C2U40_RS02180 NONE
C2U40_RS02185 NONE
        recO NONE
C2U40_RS02195  466031 ..  466048 + -12.7  -4.85599   GGCACGAGGAGAAAA             GGGACGC CACG GCGTCCC              TTTTTGTCAGGTCAA 100 66
C2U40_RS02245  476340 ..  476361 + -15.9  -3.78775   ACGAAGAATGTGAAA           GAGGGACGC CGCG GCGTCCCTC            TTTCGTGGTCGGGGG 100 52
C2U40_RS02265  482197 ..  482216 +  -5.1  -2.52676   GCTGGCGGAGAACTC            TATTGTC TTTCTT GACAATA             TGCCTTGAAAAAATC  47 176
C2U40_RS02270  484544 ..  484567 + -13.2  -3.69618   ATCAACAACCAACTC          GTGATCGACC GCCA GGTCGGTCAC           TGTTTTCCCCTTGCG  93 46
C2U40_RS02275 NONE
        pyrG  487197 ..  487223 + -11.5  -5.46629   TAATTGAAAATAAAT         GCGGTTGGGGC CCTGT GCCGCAGCCGC         TTTTTTTGGCATATT 100 38
C2U40_RS02285  488603 ..  488622 + -16.4  -5.05505   TCCACGCTTTGCAAA            GCCCCGCC AATC GGCGGGGC             TTTTTCGTTTCTGCT 100 53
C2U40_RS02290 NONE
C2U40_RS02295  489791 ..  489810 +  -3.6   -3.2032   CCACAGAGGAGCTGG            CATGATCCG GAT TGGA-CATG            GTTTTGATGTACACA  47 21
C2U40_RS02300 NONE
C2U40_RS02305 NONE
C2U40_RS02310  492041 ..  492056 +  -3.2  -2.82516   GGGGGCTTGGTTGGA              CCTGCA GGGA TGAAGG               TGTGATAGTACAGCG  41 13
         pcm NONE
C2U40_RS02320 NONE
C2U40_RS02325 NONE
C2U40_RS02330  495378 ..  495392 + -12.8  -4.84527   CAAGCAAAACAAAAA               GGGGCC AAA GGCCCC               TTTTTCATGTCTGCA 100 68
C2U40_RS02340 NONE
C2U40_RS02345  497316 ..  497341 + -11.9   -5.8901   TGTTTGGTCAAAGAA         GCCGTGC-TTCC CTG GGAATGCGCGGC         TTTTTTATTTTCTAT 100 54
C2U40_RS02350  499286 ..  499310 +  -7.1   -4.6821   TCATGACCGACGCCG          CAACCAGACAT AGC ATGTCTGGCGG          TTTTCTATTACAATT  81 148
C2U40_RS02355  501279 ..  501295 + -15.1   -4.7878   AACTGCTGTCAAAAA              GCCCCGC CAT GCGGGGC              TTTGTTTTATCCGTG 100 62
C2U40_RS02360  501520 ..  501551 +   -13  -3.92522   GGGGCCACCATTTTC      AGACAACGCCGCTC TCTT GAGCGGCTTTGTCG       TTTCTGGCGTTCACC 100 31
C2U40_RS02365  503205 ..  503229 + -15.7  -2.77235   ATGAACCTAAAAAAA          GGCCTCCCACC GAT GGTGGGAAGCC          TGGTTCAGTGCTTCA  95 37
C2U40_RS02395 NONE
C2U40_RS02400  511688 ..  511716 +  -2.1   -5.0133   CCAGCCCCTTGCAGG        CGGGCCGGGAGAG GTG CACAATCGGCACG        TTTTTTCGCCGCCTG  71 49
C2U40_RS02405  512040 ..  512068 + -23.3  -4.24534   AGGCATCAGCTAACA        CAATCAGGGCGCC AAT GGCGCCCTGATTG        TTTCTCTATTCGTTG 100 57
C2U40_RS02420  515414 ..  515430 + -15.1  -3.76232   TGATGGGCACACTCA              GGGGGCC TTG GGCCCCC              TTCTCTATTTGGCAG 100 52
C2U40_RS02425  516607 ..  516617 +  -2.4  -4.77165   TGCCAGCAACCACGG                 GGCC TGT GGCG                 TTTTATTGTACAAAA  68 87
C2U40_RS02430  517122 ..  517147 + -20.5  -5.96521   ACCTCATCTGAAGAA         CGGGCCCGAAG GCAA CTTCGGGCCCG          TTTTTTTTGGTTCAT 100 47
C2U40_RS02450  521769 ..  521788 +   -15  -5.61596   GCAAATAGAGAGGGA            GCGCCGGA CTTG TCCGGCGC             TTTTTTTATGCGGAT 100 53
C2U40_RS02460  524180 ..  524201 +  -7.3  -4.56597   GTTGTACTGCAGGGC           CA-CGGCGAC CAC GTCGTCGGTG           TTTTTGCCCAGCGAG  77 111
C2U40_RS02470  526712 ..  526728 + -10.8  -3.83324   GATGAACCTAAAAAA              CGGCCC GAACA GGGCCG              TTTGCGTGTTTGTGG  84 36
C2U40_RS02485  531008 ..  531033 + -11.1  -3.30124   GCAGCGCCGCCTTGG         CT-CGGGCCGGG TTG CCCGCCCCGCAG         TTCTGCGAGATGAAG  69 462
       groES NONE
        groL  534167 ..  534186 + -12.8  -5.93809   GCCCTGGTTACCAAA            CGGCTCGC TTTT GCGGGCCG             TTTTTTTTATGGCGA 100 45
C2U40_RS02505 NONE
C2U40_RS02510  536692 ..  536708 +  -5.1  -2.78018   CAAGGCGTATTTAAT              TTAGCCA AAA TGGCTCA              TGCTTGGTCCAAGAT  48 22
C2U40_RS02515  536956 ..  536978 + -14.9   -5.4251   GACCCTAACGAAAAA           GCCCCCATC CAGTC GATGGGGGC           TTTTTTATGTCTGCG 100 39
C2U40_RS02530  542833 ..  542854 +  -8.7  -3.05069   AGTTAGAGCAAAGAC           CTGATGCGC CTTG GCGTGTCAG            TGCTTGTTTGGTGAA  62 88
C2U40_RS02535  543068 ..  543096 + -14.1  -4.65747   TTGCTAACAAGAATG        CAGACATAAGCAT CAC ATGTTTATGTCTG        TTTTCTTCGGCCTTG 100 50
C2U40_RS02540 NONE
         rrf  546384 ..  546403 +   -15   -5.4833   ACCTAACACGAGAAA            CCCCGCTC ATTT GAGCGGGG             TTTTTTATTGCCTGA 100 41
C2U40_RS02550  547358 ..  547383 + -17.7  -3.27022   CCGGGCATAGAAAAA         GGCGTATCCCA TTGC TGGGATACGCC          TTCGTCTGCACTGCA 100 52
C2U40_RS02555  548853 ..  548879 + -13.8  -5.04249   TGCAAGCTATGCGTC         AGGAGGTTACAC CAA GTGTAACCTCCA         TTTATTTTTTACCCA 100 77
C2U40_RS02590  553444 ..  553459 +  -3.2  -3.13403   ACCACTCAACGCCAT              GGATAC CCCA GCATCC               TATTGCTACACCCGC  45 245
C2U40_RS02595  554689 ..  554701 +  -3.3   -2.7186   ATAATCTGGAAGTGA                TCGCC GAC GGAGA                TAGTTGGGCGACTTT  41 127
C2U40_RS02600 NONE
C2U40_RS02605  557044 ..  557065 +  -8.7  -3.69068   GAATGCCTAACTAAT           GGGCCAC CAAGAAGA GTGGCCC            TATTTATTACCGTGA  69 31
C2U40_RS02625 NONE
C2U40_RS02630 NONE
C2U40_RS02635  561494 ..  561535 + -10.7  -3.89346   ACCAGAAAGCAAAAA TCCCCTCACCCGGACTGGC GTAA GCCAATCCGGGCGGGAGCA  TTTATGCCGTCAAGC  86 135
C2U40_RS02640 NONE
C2U40_RS02645  563906 ..  563920 +  -8.6  -3.21994   ATGAAGGACCTGTAG               GGTTGA ATA TCAACC               TATTAGATCTTTTTC  63 434
C2U40_RS02655  564280 ..  564306 +  -2.3  -2.56343   CTGACATAGCGTTCA        CC-TGATGCACA TGCT TATGCGTCAAGG         ATTAATAATTAAGGT  38 37
C2U40_RS02660  564528 ..  564546 +  -7.4  -4.96501   AGATATAACATCACA             GGGTATCG TCA TGATGCCC             TTTCTTTTTATGGCC  90 33
C2U40_RS02665  565269 ..  565302 + -12.6  -4.87665   GTCACTTTTCCACAC     TGATAACAGGGCACC CACAA GGTGCCCTGTT-TCG     TTTTTATGCCTGACC 100 45
C2U40_RS02670 NONE
C2U40_RS02675 NONE
C2U40_RS02680  567119 ..  567145 +  -4.3  -5.18866   CCGCTCTACCTTTAA         CCCTGACATGC TTTAT GTGTGCCGGGG         TTTTGTTTATTTGGA  87 348
C2U40_RS02690 NONE
C2U40_RS02695 NONE
C2U40_RS02700  568285 ..  568312 + -15.7  -3.51411   TTCCGATCCCCCCAG        CAAGGCCACCT CACTAC AGGTGGCCTTG         TTCATTTCAAGGAGT 100 92
C2U40_RS02705 NONE
C2U40_RS02710 NONE
C2U40_RS02715  569449 ..  569471 + -14.9  -3.84451   ACCCATGCTCCCATA           CAGCCCCTC ACTCC GAGGGGCTG           TTTGCATTTGAAGGA 100 60
C2U40_RS02720 NONE
C2U40_RS02725  570432 ..  570455 + -18.2  -3.54424   CACACACAGCATAAA          GGGCCAGCCT TCAC AGGCTGGCCC           TTTGCAACACTGGAA 100 61
C2U40_RS02730 NONE
C2U40_RS02735  571262 ..  571294 +  -8.4  -5.41143   ATTAATGGGATAGGT      CGTGGGGAAGGCCA ATTCA TGGCCTTTCCTTTG      TTTTTTTGCCCGCTA 100 86
C2U40_RS02740 NONE
C2U40_RS02745  574942 ..  574952 +    -4  -3.65224   GCTGGACCTGTGGTC                 TATC ACC GATA                 TTGTTCAACTAGAGT  53 141
C2U40_RS02755  578463 ..  578475 +  -6.9  -4.14859   GAGGCCCACCGAGCC                CGCCT GAC GGGCG                TTTCTCCTTGTTGAT  70 19
C2U40_RS02790 NONE
C2U40_RS02795  586977 ..  586992 +  -2.6   -3.6003   GTGAACGCTCATTCC              G-GTTCA ACC TGAACAC              TTTGCACCTCCTTTC  49 272
C2U40_RS02800 NONE
C2U40_RS02805  589527 ..  589537 +  -6.8  -3.41602   AATGTGAAGAACTCG                 CTGC GGG GCAG                 TTGTCATAAGCTCGG  59 122
C2U40_RS02815  590111 ..  590151 +  -3.3  -3.29144   CGCGCAACGGCCTGA CCCGCTCGTATGATG-TGC AGTCA GCGGCAACATTCGA-CGGG TTGTAAGCCAAGTGC  47 157
C2U40_RS02820  591518 ..  591533 +  -5.4  -2.91276   CTGCGCAAAGAGGAG              CT-GCGC CGT GCGCAAG              ATTTATAAGGGACAA  49 2
C2U40_RS02825  592228 ..  592266 +  -4.7  -2.80443   CCTCGGTACACCTCG  TGCGCTT-TTCTC-CGG CAGCAGA CCGCGAGGATAGGCGCA  TCTCCTCCCCTCTGA  46 78
C2U40_RS02830  593569 ..  593609 + -20.7  -2.53015   TTGAAAACACCTATT  TCGAAAACAAGAGAGAGCC AAT GGCTCTCTCTTGTTTTGGG  TAGCTTGAAGGATGT 100 64
C2U40_RS02850  598741 ..  598751 +  -2.4  -3.54543   CTGTTTCGACCGCCA                 AGGG TCG CCCG                 TTTGCCGAGGTGAAT  47 71
C2U40_RS02855 NONE
C2U40_RS02860 NONE
C2U40_RS02865  602263 ..  602286 + -18.2  -4.54047   GCGGTAAAGCGAAAA          GCGGTCAGCC CTTG GGCTGACCGC           TTTTGTATGCGCTGG 100 91
C2U40_RS02885  606024 ..  606054 + -25.6  -3.16668   TCAGACGGCCACATA       CAAAGAGGGCGCCC AAT GGGCGCCCTCTTTG       TTGCTGACAATCTTG 100 48
        cysQ  609975 ..  610005 + -16.1  -5.65927   ATCGGGATAGAAAAA       GGCCGGACTGGCG TGAAC TGCCAGCCCGGCC       TTTTTTATTTCGCTA 100 49
C2U40_RS02925  613435 ..  613446 +  -2.2  -2.83522   GTGCGGTATCACACA                GTTG GCCG CGAC                 GTTTGCTGACAAGCT  39 85
C2U40_RS02930 NONE
C2U40_RS02935  631189 ..  631208 + -13.6  -5.74122   GACCCCAGGCAACAA            GCGGCAGA TTCA TCTGCCGC             TTTTTTTATGTCATG 100 48
C2U40_RS02940  632424 ..  632439 + -10.4  -5.10208   CAGGAGCAATAAACA              TCCCGC CTTG GCGGGA               TTTTTATTGGGGTTG 100 43
C2U40_RS02950 NONE
C2U40_RS02955  636387 ..  636417 + -25.6  -3.36968   CGCAAGGCGCCATAA       CAATCAGCCCGGCC AAT GGCCGGGCTGATTG       TTATCCGGTTGGCTG 100 63
C2U40_RS02965  639207 ..  639226 + -13.6  -6.15828   TCGCGCATAAAAAAA            CCAGCGAC CGAG GTCGCTGG             TTTTTTTTTCGTCCA 100 49
C2U40_RS02980 NONE
C2U40_RS02985  643151 ..  643167 + -13.7  -4.88736   CAGCAGATAGACAAA              TCCCGCC GCT GGCGGGA              TTTTTGTCGGTGGTG 100 86
C2U40_RS02990  644116 ..  644127 +  -2.2  -5.11033   TGCTGGCCGAGCGTC                TGGG CCGC TCCA                 TTTTTTAACCTTGTC  74 6
C2U40_RS02995  645477 ..  645496 +   -15  -4.83615   GACGATGACAAAACA            GGCCGGAC CCAT GTCCGGCC             TTTTTGTACCCGCTC 100 46
C2U40_RS03000  646766 ..  646800 + -11.5  -2.91274   GCTGATTGTTGACGT    TGATCCCG-TTGCTGC AATG GCGGCAAACGGGCTCA     TCTGGTTGAACTAGG  75 40
C2U40_RS03005  647089 ..  647120 +   -13  -4.09685   GAGGCTCTCCTCAAG      CAACAAGGGCTGCC CGCG GGCAGCCCTTGTCA       TTTTCGGCCCTCACA 100 39
C2U40_RS03020  652443 ..  652461 +   -16  -4.24404   ACCGAAATGAAAAAA             GCCCGCTC GAT GAGCGGGC             TTTTAAAATTTGGCT 100 40
C2U40_RS03035 NONE
C2U40_RS03040  656875 ..  656896 + -15.9  -4.14397   TCTAAAAAATGAAAG           GGGGCCAGT GCGA ACTGGCCCC            TTTGCTTTATGGGAT 100 36
C2U40_RS03080  662997 ..  663024 + -12.7  -2.58767   GTTTAGATGATGTAA        ACCCCCTAGCC TTGGTT GGCTAGGGGGG         TCCGTTCGTGGTTAC  76 31
C2U40_RS03105  669068 ..  669097 + -20.9  -3.25169   CACGCGTTGCAAAAA       CAACAAGGCCACC CTCG GGTGGCCTTGTTG        TTGCTGGCTTATTGC 100 55
C2U40_RS03115  671769 ..  671788 + -13.6  -5.63517   GAGTGTCAGCAAAAA            CCCCGTTG CTTG CAACGGGG             TTTTTTGTTTCCGGC 100 49
C2U40_RS03145 NONE
C2U40_RS03150 NONE
C2U40_RS03155 NONE
C2U40_RS03160  675843 ..  675864 +    -3  -2.56596   CAAAAATTTGTAAGT           GATATTCC GATGCG GGAATAGC            TCAGTTGGTAGAGCA  40 39
C2U40_RS03165 NONE
C2U40_RS03170 NONE
C2U40_RS03175 NONE
C2U40_RS03180  676273 ..  676287 +   -10  -3.00651   TTGTATTGTCCATTA               CATCGC GCC GCGATG               ATTTGTCGTATCCGG  69 69
C2U40_RS03200 NONE
C2U40_RS03205  681662 ..  681681 + -12.8  -4.85782   CCAGTGCTTGCGAAA            GGGCTCCC GTAC GGGGGCCC             TTTGTTTTTGGCCAA 100 48
C2U40_RS03210 NONE
C2U40_RS03215  682109 ..  682122 +  -2.3  -2.61582   TGTGTATCACCCAGG               CCGAC CTTT GTGGG                GTTATAGCTCAGCTG  38 78
C2U40_RS03220  682206 ..  682228 +  -3.5  -3.06312   CACCATTATTGAGGA           TGAATGG CCGCCAGAA CCATTCA           TTCAGTACCGAATTT  46 36
C2U40_RS03225 NONE
C2U40_RS03230  682453 ..  682473 + -18.3  -5.46706   AACGAAAGTAGAAAA            GGCCACCGC ACT GCGGTGGCC            TTTTTGTTTTGCGCT 100 49
C2U40_RS03240  688307 ..  688326 + -13.6  -5.60993   AAGGCAATGATCCAA            TCCGGAGC CCAG GCTCCGGA             TTTTTTTATGGCGGG 100 89
C2U40_RS03280 NONE
C2U40_RS03285  699037 ..  699061 +  -5.6  -3.16742   ACCCGTTATCAGTGA          CCAGGGGC GGGCTTATG GCCCCGGG          TTGCTCACCCTTGAA  52 26
C2U40_RS03290 NONE
C2U40_RS03295 NONE
C2U40_RS03300  703070 ..  703087 + -12.7  -3.20227   ACAGCGAATAAAAAA             TGGGGCC TGCG GGCCCCA              TCTTCATGGTTGGAG  81 77
C2U40_RS03315  705990 ..  706007 +  -6.9  -4.68593   CAGCATTAACGAAAT             CACGTGC GTCA GCACGGG              TTTTTAAGTCGTAAG  81 394
C2U40_RS03320  706541 ..  706563 + -14.9  -5.67063   AGCGAATCAGCTTCA           CAGGGCTCC TATAT GGAGCCCTG           TTTTTTTGTGGTGCA 100 43
C2U40_RS03325  707933 ..  707947 +  -4.2   -2.6563   GCTAAAATATAACGT               CATCCC AGG GTGATG               TGGCTTGTTCAACAG  43 47
C2U40_RS03330  708374 ..  708406 + -23.5  -4.42062   CGCTTGATGACCCGC      CGCCCCGCCAGCC ACCCATC GGCTGGCGGGGCG      TTTCTTTGCCGCGTG 100 34
C2U40_RS03335 NONE
C2U40_RS03340  711001 ..  711018 + -11.3  -5.88061   GGGCCTGTGTGAAGA             TGCCGAC TCAG GTCGGCA              TTTTTTTGCTTTTTT 100 50
C2U40_RS03345  711793 ..  711810 + -12.7  -4.15006   AGCCCAAATATAAAA             GGCCAGC GAAT GCTGGCC              TTTTGCAGTGAGTCT  95 53
C2U40_RS03355  713203 ..  713232 +  -4.1    -5.252   CAACTAAAGCGCCCT       GCGCCGAGGGCTGG TTA CCTGTTCA-GGCGC       TTTTTTGTCAGCGTC  84 34
C2U40_RS03365 NONE
C2U40_RS03370  715956 ..  715973 + -12.7  -5.58454   GTTGCAACAAAAAAA             GAGGGCC CGTG GGCCCTC              TTTTTTTCATCTCGG 100 47
C2U40_RS03380  718181 ..  718199 +   -16   -5.5353   GGAGTGATGATTGCA             GCGGAGCC ACC GGCTCCGC             TTTTTTGTTCCTATC 100 44
C2U40_RS03385  719179 ..  719208 + -19.5  -3.80114   AGGTCATGAGCACCA       TGAAAACAGGGGC CGCG GCCCCTGTTTTCA        TTTGCTCAGTTCATC 100 44
C2U40_RS03405 NONE
C2U40_RS03410 NONE
C2U40_RS03415 NONE
C2U40_RS03420 NONE
C2U40_RS03425 NONE
C2U40_RS03430 NONE
C2U40_RS03435 NONE
C2U40_RS03440 NONE
C2U40_RS03445 NONE
C2U40_RS03450 NONE
C2U40_RS03455  729877 ..  729890 +  -3.8  -3.14931   CGCCCCCGCCGGGAC               GAGG AGAGCC CCTC                TTGCTGCAAGCTGAA  47 62
C2U40_RS03460 NONE
C2U40_RS03465 NONE
C2U40_RS03470 NONE
C2U40_RS03475  734438 ..  734450 +  -4.1  -2.69977   TCCGATTTGTTAGCC                TGAGG AAG CTTCA                TGATCTCTAGCGTAT  43 23
C2U40_RS03480 NONE
C2U40_RS03485  736408 ..  736439 +  -8.6  -3.67976   TCCTGAGTGTCGGTG      CCCTGCCTG-GCAGG GCG CCGGTACAGGCTGGG      TTTAGCCTTGATGAA  69 35
C2U40_RS03490  736904 ..  736930 +  -4.9  -5.09762   CGGCCGCAAATAAGC         AAAGGGCGGGG CAAAT CCCCGCCCAGC         TTTTATTTCTTCGGA  81 28
C2U40_RS03500  738354 ..  738385 +    -3  -3.66286   ATTTGAGTTTGGTTA      TTGGCGTGATATGT GTAG ATGTATGGCGCCGA       TTGTTAGGCTAATAT  51 176
C2U40_RS03505 NONE
C2U40_RS03510 NONE
C2U40_RS03515  740369 ..  740393 + -20.1  -5.20333   CTCTGGCAGATAAAA          GGCCCCTTGTG CTG CACAAGGGGCC          TTTTTGTTGTCCGTA 100 56
C2U40_RS03520 NONE
C2U40_RS03525 NONE
C2U40_RS03530  744219 ..  744238 + -16.4  -5.24129   TTGCGCAAAGAAAAA            CGCCCGGC AGTT GCCGGGCG             TTTTTTATGGGAGCC 100 62
C2U40_RS03550  749630 ..  749659 + -16.5  -2.64099   TTTGTGCCTGCCATA       AAAAACGCCCCGC AGTG GCGGGGCGTTTTG        ATTGTCATGGACGGC 100 81
C2U40_RS03565  754528 ..  754553 + -16.1  -5.42975   GGCCGCAGTGACAAA         GCCCCGCCCTC TGCC GAGTGCGGGGC          TTTTTGTTTATGTGA 100 62
C2U40_RS03575  757584 ..  757608 + -20.1  -2.85351   ATAGATAGGAAAAAA          GAGGGGAGCCA TCA TGGCTCCCCTC          TCTGCTGTGGCCACC 100 214
C2U40_RS03590 NONE
C2U40_RS03595  761000 ..  761013 +  -9.5  -5.16572   TCCCATAAAAAAAAA               CCGCC CTAG GGCGG                TTTTTTGCGTTGGCT  95 52
        fadH  765233 ..  765249 + -12.3  -4.76075   ATGTATTGCGACAAA              CCCCTGA TGC TCAGGGG              TTTTCTTCATCTGGT 100 54
C2U40_RS03610  765880 ..  765897 + -11.3  -5.73978   TTCATTACCGGCAAG             GCCCTGA CTCG TCAGGGC              TTTTTTGTTTCTGGT 100 46
C2U40_RS03640  772047 ..  772090 +   -11  -2.73681   TGCGGATCTGCCCCT CGATCAGGCTGGCGTTGGGGC CCA GCACCAGCACCAGC-TGATGG TCGTTGAGCTGGATC  63 117
C2U40_RS03680  780533 ..  780551 +   -11  -3.40522   GTTGATGATGGTGCG             GCACAGCT CCC GGCTGTGC             TTGTCGTCGGGCAGT  71 261
        glyA  788428 ..  788451 + -15.4  -5.28826   CACCCGGTTTGAGAC          CAATGCCACC CACG GGTGGCATTG           TTTTTTGTAGCGTTT 100 51
C2U40_RS03720 NONE
C2U40_RS03725  789459 ..  789470 +  -7.2  -4.18018   TAGAGCCTGCCCCCG                GGGC CGGC GCCC                 TTTTCCGTCAACGCC  72 112
C2U40_RS03730 NONE
C2U40_RS03735  791135 ..  791147 +  -3.3   -3.0386   GGATATCCGCATTAC                CGCCA AAC TGGCC                TGATTTATCAATGTT  43 10
C2U40_RS03740  791834 ..  791849 +  -3.9  -3.29471   CTTGACCCTGGAAAA              GCTGG CCCAGT CCGGC               TTCCTGTGATGGACC  49 1
        ribB  793137 ..  793162 + -12.7  -4.21812   GAAATGAATATGAAG         TAAGGGATGAC ATCG GTCATCCCTTG          TTGTTTTGCCTCAGC  95 53
C2U40_RS03755 NONE
C2U40_RS03760  795502 ..  795518 +  -9.4  -4.84527   GCATCTAAGAGAGGA              GCCAGC TTATT GCTGGC              TTTTTACTGTATGGG  95 59
C2U40_RS03765 NONE
C2U40_RS03770  796992 ..  797017 +  -9.7  -3.11329   TGAGGGTGACAGCAA         GGGGGAGCGCCA TGC TGGCA-TCCCCC         TATATATCTCTGTTT  69 38
C2U40_RS03775  799220 ..  799235 +  -8.2  -2.82623   CGCAAGCTAGGAAAG              GGGCGG CCCG CCGCTC               TGCTTGTCAAAAAAA  60 31
C2U40_RS03780 NONE
C2U40_RS03785 NONE
C2U40_RS03790  802898 ..  802916 + -13.1  -4.40237   ACAGACAAACAAAAA             GGGCGCC ATAAC GGCGCCC             TTTTGCTGTGTGCTG 100 63
C2U40_RS03810 NONE
        motB  807952 ..  807978 + -16.6  -3.95435   TCATCCGAACCGACA         GCTGCGGCTCTC TCT GATAGCCGCAGC         TTCTCTTTTCAAGCA 100 123
C2U40_RS03820  808506 ..  808527 + -15.9  -4.32857   GTGGATGCCAGAGAA           CAGGGGAGC CCCG GCTCCCCTG            TTTGTATTTAGCGGG 100 46
C2U40_RS03835 NONE
C2U40_RS03840  812268 ..  812286 + -13.1  -5.42975   TCGTGATGATACAAA             CCCCGGG CTGGC CCCGGGG             TTTTTCTTTATATCA 100 42
        folP NONE
C2U40_RS03850  814521 ..  814540 +   -15  -2.96369   TTTAATGAACAAAAA            GGGCGGCT TTTA AGCCGCCC             TGGTTGTATCTTGTT  90 36
C2U40_RS03855 NONE
C2U40_RS03860 NONE
C2U40_RS03865  815839 ..  815852 +  -5.9  -3.17325   CAATTAAGCAGTGAG               CCTGG GTAA CCGGG                TGTATTATAGCCAGT  54 39
C2U40_RS03870  816062 ..  816082 + -12.6  -5.24796   AGGGTAAAGCGCCAA            GCCCCGAT TTGAC ATCGGGGC            TTTTTGTTATGTGCA 100 93
C2U40_RS03875 NONE
        nusA NONE
C2U40_RS03885  820872 ..  820887 + -11.8   -4.3739   GAGTCAGATTAAATA              GGGGGC CGCG GCCCCC               TTTTATCGCAGGATA  95 46
C2U40_RS03890 NONE
C2U40_RS03895  822329 ..  822339 +  -4.6  -3.41222   TATCGACGCGTGTTG                 GCCG TTG TGGC                 TCTTTCCCGTTGCGA  51 52
C2U40_RS03900  822741 ..  822760 + -13.6  -5.45652   AGATTTCGCGAAAAA            GGGGAACC TCCG GGTTCCCC             TTTTTTATTGCGCGT 100 50
         pnp  825108 ..  825133 +  -9.8  -5.65177   CAGGCTGTGTAAGAA         TCCGAAACTC CTTGTT GGGTTTCGGA          TTTTTTTATGCGTAT 100 111
C2U40_RS03910  826524 ..  826537 +  -6.7  -2.68545   TTGCGGCTTGATGTT               GTCTC TTTT GAGAC                CTCTTGTTATAACGA  52 80
C2U40_RS03915  828257 ..  828289 + -10.6  -2.79302   GCAGGTGGCGCACGC     TGAGCAGG-CCGGTG AGGG CATCGGTCCGGCTCA      TCTCCTCCAGCTGCT  60 478
C2U40_RS03930  829948 ..  829969 + -11.6  -5.40625   TCATTGATGAAAAAA           GAAGCCGG CGCAGT CCGGCTTC            TTTTTTATCTCGTGT 100 42
C2U40_RS03970 NONE
C2U40_RS03975 NONE
C2U40_RS03980  844846 ..  844863 + -14.1  -3.51478   GACGACCAATGAAAA             CGGGGCC TGCG GGCCCCG              TTGCTTGTCTGCTCT  95 39
C2U40_RS03990  847217 ..  847232 + -10.4  -3.54459   CCTCGACTATCTAGG              GAGCGC TTAG GCGCTC               TTTGCACACCATTGC  74 16
C2U40_RS03995  848751 ..  848761 +  -2.4  -3.61178   CGGCAAGCAGGCCGC                 CGCC TGA GGAG                 TTTCCCATGACTGCA  49 19
C2U40_RS04000  849633 ..  849651 +  -2.2  -3.14848   CGCTGGCGCCGCAAG             GGGCGGCG TGA TGGCGACC             ATTTTGCTGGCGGCC  43 15
C2U40_RS04005  850940 ..  850963 + -12.4  -3.68222   GATCCCGTGATGAAA          CAGGGGGGCT CGAT GGCCTCCCTG           TTGTTCAGCTTGCGC  88 39
C2U40_RS04010  852156 ..  852181 + -19.1  -4.06419   AGACAGGCTAATGCA         CAACGGCGACC ATGA GGTCGCCGTTG          TTGTTTCTGGCACAG 100 50
        xerD  857598 ..  857611 +  -9.5  -5.44119   ACCGGCAACAAAAAA               CCGCC AGAA GGCGG                TTTTTTTCAAATACA 100 40
C2U40_RS04045 NONE
C2U40_RS04050  860750 ..  860769 +   -15  -5.69473   TCTTGCTGCCGATGA            CGGCCACC TCAG GGTGGCCG             TTTTTTTATGGTGTA 100 54
C2U40_RS04055 NONE
C2U40_RS04060  862600 ..  862641 +  -6.5   -4.8622   GTGCTGGCGTGAGGG GCACCGTGAGGGCAAAGAG GGTG CTCCTTGCGCTCATTGTGG  TTTTTAATTGCCAGC  81 29
C2U40_RS04065  863294 ..  863312 +  -7.4   -3.1552   CATGCCCGTGCGGTC             CGGTGC CCTCCTT GCACCG             TCTTCCTGCCTGCCC  61 94
        nqrE  863997 ..  864014 + -12.7  -4.19472   GGCTGAGTGCTGCAA             CGGCCAC GCAA GTGGCCG              TTTTGCCATCTATTG  95 43
C2U40_RS04165  880960 ..  880975 + -11.8  -2.90798   CAAACCAAAAAAAGA              GGCGCC CAAG GGCGCC               TCTCCTCATTTATCG  75 68
        ubiF NONE
C2U40_RS04200  888803 ..  888832 + -10.7  -4.08216   ACTGTTTTGACATTT       TGTCTGCGGCC CCCTGTCA GGCCGCAGCCA        TTTTGGGCAACATGA  88 66
C2U40_RS04205  889547 ..  889561 +  -2.8   -4.1891   GGGGCGGATGCAAGT               GATTGA TCA TCTATC               TTTATCTTGCAGGCC  60 49
C2U40_RS04210  890799 ..  890815 +  -3.6  -2.69471   TGGGATCGGCAAATT              CCGGGT TCCAC ACCAGG              CTTATCTCCCACTCG  40 183
C2U40_RS04220 NONE
C2U40_RS04225  892641 ..  892659 + -13.8  -3.09516   GCCTGACAACAAAAA             GCCCCCGT CGA GCGGGGGC             TTGGATGGTGGGCGA  87 35
C2U40_RS04235  895250 ..  895277 +  -6.2  -2.72144   GGCGGCGCAGGAGGC        GGTGTCGCTCTC CTGC GACAGTGGCGCC         CTTTGGCGGGAATCG  51 151
C2U40_RS04240  895821 ..  895844 + -18.2  -3.96216   CGCAGCCAGCAATGA          GAGAGGGGCC GACA GGCCCCTCTC           TTGTTTGGGTCGGCA 100 42
C2U40_RS04280  902481 ..  902491 +  -6.8  -2.83634   CGCACCTTCACGGTG                 CAGC CGA GCTG                 TCGTTAGTGTAATTT  53 8
C2U40_RS04285  903112 ..  903129 +  -4.1  -3.14132   TCATCATTCCATGTT             GACGGGT GTCC ATCTGTC              TTAATCAGGAACAGA  47 24
C2U40_RS04290  904490 ..  904507 + -12.7  -4.66057   AACCAATGTGAACAA             CGCCTCC GATG GGAGGCG              TTTTCGTTTCTGTGT 100 76
C2U40_RS04330  911885 ..  911895 +  -8.2  -3.24735   CTGATGGCCTGATTG                 GCGG GGC CCGC                 TTGCCTGTTTCCCTG  63 37
C2U40_RS04335 NONE
C2U40_RS04340  914035 ..  914051 +  -7.2  -5.61596   GACCACCATCAACAA              CCGGGC CTGGC GTCCGG              TTTTTTTATGGCGGT 100 39
C2U40_RS04350  915698 ..  915714 + -10.8  -4.06904   GGGGCCATAAAAAAA              CCGGGC ACTTG GCCCGG              TTTGTCATTGCGTCA  88 130
C2U40_RS04390  927086 ..  927101 + -10.4   -5.0925   GTCGGCCATCAAAAA              GGCAGC CTAG GCTGCC               TTTTTCGTTTTGAGC 100 51
C2U40_RS04405  929837 ..  929870 + -16.1  -3.84996   GACTGCTGTGACATA     TGTGCGAAAGGGGCC TGCT GGCCCCTTTTGCATG      TTTGCGTTGTCTCTT 100 49
C2U40_RS04415  931814 ..  931831 + -14.1  -5.40474   TCCCTGTGTTTTTTA             CCGGGCC CGAG GGCCCGG              TTTTTTTAGCCGAAT 100 57
C2U40_RS04420  932668 ..  932691 +  -7.4  -3.12351   TGCTCTATGGGGATA          GCCTG-GGAGC TCG GCTCCGTGGGC          TTGCGTCTAGCCGCC  59 196
C2U40_RS04425  934379 ..  934415 + -16.5  -4.39426   GGATTGGATGCTCGC    TGCTGCGGGCCCGGATC CTG GATCCGGGCCCGCCTTG    TTTTATCGGCCTGTC 100 44
C2U40_RS04430  935440 ..  935472 + -15.7  -3.31766   ATTACAGGGTCACAA      AAAGAAAACCGGCGC ATT GCGCCGGTTTTTTTA      TCTTCTGCTGTGGTT 100 53
C2U40_RS04440 NONE
C2U40_RS04445 NONE
C2U40_RS04450 NONE
C2U40_RS04455 NONE
C2U40_RS04460  943297 ..  943321 +  -2.1  -4.20368   AATGAGGCTGGGGCG          TAAGGGCTG CGGTTGC CAGTCCTGA          TTTCTATTGAGATAA  58 84
C2U40_RS04465 NONE
C2U40_RS04470 NONE
C2U40_RS04475  946659 ..  946677 +  -5.8   -5.1675   CATTTTGGCCGGGAA             GGGGGTAG AAT CGTCCCCC             TTTTTTGGTCGATGC  86 42
C2U40_RS04480  947592 ..  947608 + -13.7   -5.4251   CTCGGCTGACACAGA              CGGCACC TCG GGTGCCG              TTTTTTATGTCTGCC 100 32
C2U40_RS04495 NONE
C2U40_RS04500 NONE
        trpS  950435 ..  950460 +  -6.1  -4.64861   GAAGGTGTAGTAGAA         GAGAGCTGGGT ATTT GCCTGGCTTTC          TTTGTTTTACCCGAC  77 49
C2U40_RS04510 NONE
C2U40_RS04515  951342 ..  951356 +  -2.8  -3.41051   TGGCCAATTTTTTGG               CTAATC ACT GAATAG               TTGTGATCGGCCTCC  47 15
C2U40_RS04520  952862 ..  952893 +  -5.6  -2.80816   TCCAAATTGAGGTGG      GGAGCTCTCCCGGC AGGA GCCGGGACCCCACC       TGTCGTCAATGAAAG  48 41
        astA NONE
        astD  955541 ..  955559 +  -8.8  -3.58726   CCACGACAATAAAAG             GGGCACTG AAC TGGTGCCC             TTGTCTGTACCCGCA  69 85
C2U40_RS04535  956427 ..  956445 + -11.7  -4.45544   CTGCTGCATGCAAAA             CGCCTCC CTTGC GGAGGCG             TTTTCATTGGTGGCA 100 64
C2U40_RS04545  958638 ..  958661 + -18.2  -4.26202   ACCGCGACATAGCAA          CAGGGCTCCC CATG GGGAGCCCTG           TTTGTTGGTGGGTCT 100 48
C2U40_RS04590  971921 ..  971938 +  -8.3  -5.06816   GACAGCAAACGACAT             AGCGGCC TGTG GGCCGCC              TTTTTATTGCCCGCT  93 42
C2U40_RS04635 NONE
C2U40_RS04640  975274 ..  975303 + -11.5  -3.07043   CCCTGTCAGATGACA       TCGTAACGTTACG ATAA CGTAGCGCTACGA        TGTTACGGTGCTGCC  75 448
C2U40_RS04650 NONE
C2U40_RS04655 NONE
C2U40_RS04660 NONE
C2U40_RS04665 NONE
C2U40_RS04670  978190 ..  978213 +  -6.6  -2.75528   CAAAGCCAACGCCAC          GGCGGCTGAT CTCC ACCAGCGGCC           TGATGTCTTGCACCT  49 67
C2U40_RS04680  981008 ..  981028 +  -7.5  -3.40522   AAGAGTGGCAAGGAT            GGTGGCGAC AAT GTGGTCACC            TTGTGGTGGCAGCGT  62 437
C2U40_RS04685 NONE
C2U40_RS04690 NONE
C2U40_RS04695 NONE
C2U40_RS04700 NONE
C2U40_RS04705 NONE
C2U40_RS04710 NONE
C2U40_RS04715 NONE
C2U40_RS04720  993314 ..  993324 +  -6.8  -3.53091   GGACTTCGTTCAGTT                 CTGC CTA GCAG                 TTTGCGCCGCCGACT  61 204
C2U40_RS04730  994890 ..  994903 +  -2.3   -3.9712   AAGACGGTCAGGTCG               CATGC TGAG GCACG                TTTCTAATCAGGTCC  54 5
C2U40_RS04735 NONE
C2U40_RS04740  996468 ..  996482 +  -5.8  -2.88768   CACATCATCTTGGTC               GATTTT CTG AAAATC               ATTGTTGATCTTGCA  52 306
C2U40_RS04790 NONE
        prfA NONE
        prmC 1008756 .. 1008772 + -13.7  -4.15044   TCAGTGATGATGACG              GGCAGGC CGG GCCTGCC              TTTGTTCAAGGACAC 100 34
C2U40_RS04805 NONE
C2U40_RS04810 1010081 .. 1010118 + -14.9  -2.52676   GATGCAACTGACGAG   TATCGAGGTCGCGCTGCC CTG GGCAGCGCGGCCG-GATG   TGGATTCAAGCCCTG  89 120
C2U40_RS04815 1011028 .. 1011078 + -13.5   -5.5454   CTAAGTCTGGCTTTG CTTGCC-C-AATAAAAATGCCCCGC ACT GCGGGGCATTTTTGTTTGCGGCCTG TTTTTATTTCTTTGG 100 37
C2U40_RS04820 1012687 .. 1012702 +  -7.5  -4.77036   CAAGCCATAAAAAAA              CGGCC AGTTTG GGCCG               TTTTTCATGATACCG  90 109
C2U40_RS04830 1014661 .. 1014689 +  -3.7  -4.53303   GAGCGGGGGCATGAA        CAGGGGGCGGCAT TAT GTGTTACCCGCTG        TTTTGTCTGCAGATG  67 57
C2U40_RS04835 1015357 .. 1015382 + -20.5  -4.67234   ACTCTCTTAAAAAAA         CAAGGCCCCGG TTAA CCGGGGCCTTG          TTTTTACAGTTCGAT 100 48
C2U40_RS04850 1018895 .. 1018913 +   -16  -4.10159   GTTGTCTGACAACAA             GGGGAGCC ACT GGCTCCCC             TTTCGTTTGGGTGTT 100 55
        ampC 1024364 .. 1024380 + -10.8  -5.64274   CACCATATTGAAAAA              CGCCGG CCAGT CCGGCG              TTTTTTTATGCATAG 100 77
C2U40_RS04875 1026414 .. 1026445 +  -5.8  -3.86346   ATCCAGGCTTCCAGG      ATCAGC-TGGGCGGA GAC TCCGTCCACGCTGCC      TTTCTCCAGCGCTCG  62 107
C2U40_RS04890 1029183 .. 1029208 + -14.7  -4.11906   AAAAACAGGATAGAA         AAGAGGCGGCC CCGG GGCCGCCTCTG          TTGTTTATCGCTTGT 100 61
         tkt 1035930 .. 1035957 + -21.4  -4.27259   TAGCCGGAAAATAAA        CGCCCCTCCATC GCAT GATGGAGGGGCG         TTTTAAATCTATCTA 100 70
C2U40_RS04935 1039802 .. 1039827 + -20.5  -3.37344   GCAGTAAATGAAACC         GCAGGGCCGTC GAGT GACGGCCCTGC          TTGATTGGGTCAGAC 100 80
C2U40_RS04950 1043663 .. 1043681 + -11.7  -5.11063   CGCCGCCATAAGAAA             GGCCTCC CTTGC GGAGGCC             TTTTTGTTGGCTCAT 100 55
C2U40_RS04975 1050329 .. 1050350 + -15.9   -4.0127   ATATCGAAATAAAAA           GAGGCCACC CTTG GGTGGCCTC            TTTCGTTGTGGCTGT 100 50
C2U40_RS04990 1054665 .. 1054711 + -10.8  -3.37028   CAGATAGGTATAGAG GTGGCGCTC-GTTGCCGCTCG CCAGAT CCAGCGGTACCAGGGCGCCGC TTGTCAGCTCTTCCT  69 194
C2U40_RS05005 1057571 .. 1057588 + -14.1   -4.7373   AACCCAATAAAAAAA             GCCGGGC ACTT GCCCGGC              TTTTTCATGGGGTCG 100 56
        topA NONE
C2U40_RS05020 1062629 .. 1062643 + -11.4  -3.50572   TCAATAACGACAGAA               GCGCCA TTG TGGCGC               TTCTGTCGGGTGGCT  82 425
C2U40_RS05080 NONE
C2U40_RS05085 1079601 .. 1079614 +  -3.8  -4.70169   ATCTGGTCGACGGGA               GCTG CTTTGC CAGC                TTTTGTTGCCTGTAA  70 430
C2U40_RS05095 1079987 .. 1080002 +    -9  -5.37345   GTTTCAATTGAAAAA              GACAGC TGCG GCTGTC               TTTTTTGTCATTAAG 100 46
C2U40_RS05100 1080597 .. 1080626 + -12.9  -3.13007   CAAGTAAGGCTGGGT       GCCACGGTGTTGCC TCA GG-GGCACCGTGGC       CTTCTTTTGGCTGGT  85 34
C2U40_RS05105 NONE
C2U40_RS05110 NONE
C2U40_RS05115 1082731 .. 1082747 +  -7.9  -3.05844   CTGGCGCTTTGTTCA              GGCGCCC GCG GGGTGTC              TGTTCACCTCAACGA  59 51
C2U40_RS05120 NONE
C2U40_RS05125 1084748 .. 1084769 + -15.9  -2.82635   GATGCCGTTCAGGGA           GCCTGCCTC GTGA GAGGCAGGC            TGTCATCCTGGCCGT  95 39
C2U40_RS05130 1085489 .. 1085500 +  -4.4  -3.17529   CGAGGCGTAAATTCA                TCTG AATC CAGA                 TCTATTCCTCTCTGG  49 31
C2U40_RS05135 1086991 .. 1087009 + -17.4   -4.3586   GCCTTTTAACGACAA             CGCCCCGC TTT GCGGGGCG             TTTTGCTATGGGTGG 100 72
C2U40_RS05170 NONE
C2U40_RS05175 1096660 .. 1096685 +  -9.7  -5.00616   GCCAGTCACAAAAAA         GCCCGTCAATA TTGG TCTTGGCGGGC          TTTTTTACGGGCGAG 100 45
C2U40_RS05190 1099450 .. 1099481 +  -9.4  -4.07687   AGTATATTTTTAGGT      TCATCGCGGCTTTC CGGG GAAGGCCGCCTTGA       TTTTCAGAAAAAAGT  81 266
C2U40_RS05200 1101215 .. 1101225 +  -2.6  -3.97088   TATTTGAAAAGGTGG                 TTAT TGG ATAA                 TTTGGTGTTATCCGA  54 75
C2U40_RS05205 NONE
C2U40_RS05210 1102658 .. 1102674 +  -2.3  -3.68256   GAGCATTTGGGATCC              TGACT CCCTGCC AGTCA              CTTTTTTCCTGGGGG  49 23
C2U40_RS05215 NONE
C2U40_RS05220 NONE
C2U40_RS05225 NONE
C2U40_RS05230 NONE
C2U40_RS05235 NONE
C2U40_RS05240 1109950 .. 1109967 + -14.1  -4.42974   CAGGATGAAAGAGAA             GGGGCGC TGCG GCGCCCC              TTTGTTGTGTCTGCC 100 56
C2U40_RS05250 1113100 .. 1113123 + -18.2   -5.4833   GCAGTTGCAATAGAA          GGAGGGTGGC CATG GCCACCCTCC           TTTTTTGTTACCTGA 100 54
C2U40_RS05265 1116402 .. 1116427 + -13.3  -3.82117   ATTGAGATGATGAAA         AAGAGGCCACC CCAG GGTGGCCTCTC          TGTTTTGTCGGTGCG 100 59
C2U40_RS05280 1120156 .. 1120177 + -10.1  -3.27475   AAGTAGACGATGGGG           GCCGGGTCT TTCA AGACGCGGC            TGTTGTCGTCCGCCG  66 332
C2U40_RS05295 1125321 .. 1125347 +   -21  -4.19817   GCAGATGCAGAGACA         CAAGAGGGAGGC CTG GCCTCCCTCTTG         TTTTAGGTGCGTCAC 100 44
C2U40_RS05320 1132501 .. 1132519 +  -2.3  -3.52102   GTATGGCTTGAAAAA             GGGGAGG CATAT CCTCATC             TTGTCTGCATCGGGT  47 59
C2U40_RS05325 NONE
C2U40_RS05330 NONE
C2U40_RS05335 1137753 .. 1137772 + -16.4  -5.65927   TGCGGATGAATCGCG            GCCCCGCC TTCT GGCGGGGC             TTTTTTGTTTCAGTG 100 55
C2U40_RS05340 1138546 .. 1138565 +   -15  -3.72576   CAGGCCTGATCCAAA            GAGGGGCG AGTA CGCCCCTC             TTTGCTGGCAAGGGA 100 32
C2U40_RS05350 NONE
C2U40_RS05355 1141136 .. 1141153 + -11.3   -5.4505   ACGCCCATAAAAAAA             CCGAAGC CAGG GCTTCGG              TTTTTTGTTGCGGCG 100 48
C2U40_RS05380 NONE
C2U40_RS05385 NONE
C2U40_RS05390 1148571 .. 1148586 + -10.4  -5.28176   GCAAGCAACAAAAAA              CCACCC GGGC GGGTGG               TTTTTTATGGCTGGC 100 57
C2U40_RS05400 1150567 .. 1150584 + -11.3  -5.08255   GGTTTCAAAGCAAAA             GGGCATC GAGA GATGCCC              TTTTCTTTTCGGCGT 100 55
C2U40_RS05425 1155464 .. 1155478 + -11.4  -2.95491   AGGCCGTTGTCACCT               CAGCCG AAA CGGCTG               TCTGTCATGGGGTTT  75 58
C2U40_RS05430 1155605 .. 1155643 + -16.3  -3.69447   GCCCGCTCCAGCCTT  CATGCAAAAAGCCCACTC CTGC GAGTGGGCTTTTTGT-TG   TCTGTTTTTTGATGC 100 31
C2U40_RS05440 NONE
C2U40_RS05445 1157898 .. 1157914 +  -8.7   -4.2528   AGGCTGGTGTTGAGC              TCCAGCA GGG TGCTGGG              TTTGTTCACTTCCAG  79 143
C2U40_RS05455 1158879 .. 1158912 + -13.9  -3.63266   CGAGCTGACGGCCCA     ACGCAAAAGGGACGC CTCG GCGTCCCTTTTGCTA      TTTGCACTCCCTTTT 100 71
C2U40_RS05465 1161575 .. 1161589 +    -7  -3.13403   TTTAGGTTGACAGCC               CGGCGC CCG GCGCGG               TATTGCTAAAAGCCA  57 36
C2U40_RS05470 1161734 .. 1161758 + -12.9  -5.11063   ACAGAAATCAGAAAA          GGCCCGTAC CCACCCA GTACGGGCC          TTTTTGTTGGATGAT 100 58
C2U40_RS05475 NONE
C2U40_RS05480 NONE
C2U40_RS05485 1166606 .. 1166635 + -13.7   -4.4715   CTGAATGGCAGCCAT       AAAAAATCCCCCG ATAT CGGGGGATTTTTG        TTTTCTGCGTTGAGG 100 66
C2U40_RS05515 1173167 .. 1173194 + -16.2  -4.58395   TCTTGTCCGGTGTGT        TTGCGGGGGGCC TGAT GGCCCCCCGCGC         TTTTTGGGGCGTGGG 100 48
        deoD NONE
C2U40_RS05525 1175387 .. 1175410 + -18.2  -5.54885   GGGAGTAAACAGCAA          GAGGGGCGGT ATCG ACCGCCCCTC           TTTTTTGTTGCTGTT 100 45
C2U40_RS05555 1183255 .. 1183285 + -16.3  -3.08434   AGCGCGGCGTGCACA      GCAAGAAGGGGAGC CATG GCTCCCCTTCT-GC       ATTTGTGCTTGTTCT 100 70
C2U40_RS05570 1186635 .. 1186663 +  -4.4  -2.68545   CCCCGCACAGGGGCA        GCAGCAGGAACA CCAGA TGGTCCCGCAGC        GTCTTGTTGTGACCG  42 241
C2U40_RS05590 1191999 .. 1192013 +   -10  -3.53012   GCCAACTTCTAGTGC               CGAGAC ATC GTCTCG               TTTGGGAAAAGAACC  74 29
C2U40_RS05595 1193364 .. 1193381 + -12.7  -4.18983   CCATGAAAAAAGAAA             CACCGCC AGCT GGCGGTG              TTCTTCTTTATATGG  95 65
C2U40_RS05605 1194772 .. 1194809 +  -3.5   -5.4505   GTGTGACGTAATGGG   GAATGGCTGAATAAAGTC AGC GG-TATATTCAGCCGCTC   TTTTTTGTTAAGAAA  86 287
C2U40_RS05610 1195357 .. 1195381 + -12.2  -4.11183   GGGATCAGTCATGAA          TGATGCCGCC CATGA GGCGGCATTA          TTATTTGTGCTCACC  95 46
C2U40_RS05620 1197411 .. 1197425 +  -2.8  -3.01712   ACGTGGCGGCGCATG               GGGA CCACCAA TCCC               TCTTCCCCGCCGAAC  43 154
C2U40_RS05655 1205312 .. 1205336 +  -4.9  -3.71607   TCGTTGAGACGGGCC          CCTTGATCCAG CGC CTGCATCTGGG          TTTCCGTGGTCTTGC  58 314
C2U40_RS05670 1208745 .. 1208762 + -14.1  -5.06816   CCATCGCTGTGCTGA             GCCCGCC GCTC GGCGGGC              TTTTTATTGGCAAGT 100 44
C2U40_RS05675 1210967 .. 1210996 + -12.9  -2.51312   GAAGTAAGCCCGACC       CAGATGGGCGAAG CAGG CTTCGTCCATCGG        CTTAGTCAATGAATT  80 34
        dnaJ 1212236 .. 1212256 +   -14  -5.65513   CGACCCAGATATAAA            GAGCCGGC CCTGC GCCGGCTC            TTTTTTTGGTTCATC 100 47
C2U40_RS05690 1215309 .. 1215319 +  -2.4  -2.50966   TCACAAAAATGGCAG                 CCGG TAT CGGG                 ATCTGTTGGTTGGCT  38 54
C2U40_RS05695 1216342 .. 1216383 + -14.5  -2.68612   TGCGATCAGGCGCAG AGGGCTGTTGAGCTGCGGCT AGA AGCT-CGGCTCGACAGCCCC TACTCTCATGTGACT  90 15
C2U40_RS05700 NONE
C2U40_RS05705 1219593 .. 1219623 +  -2.5  -2.59564   GCAGCGGGTGGTGGA      CAACCTCATCAGCC GCCA GGTGGATG-GGCTG       ATTGTCGCCTCCAGC  38 403
C2U40_RS05730 NONE
C2U40_RS05735 NONE
C2U40_RS05740 NONE
C2U40_RS05745 NONE
C2U40_RS05750 1227794 .. 1227822 +   -14  -3.57561   CCGGGCGCACAATGA       C-AGAAGGGCCAC TTGG GTGGCCCTTCTCG        TTTCACACGTTCAGG 100 26
        lplA 1231789 .. 1231805 + -10.8  -4.56597   CACAAAATCAAAAGA              GGCGCC CGAAA GGCGCC              TTTTTGCCAGCCGCC  95 70
C2U40_RS05765 1233642 .. 1233673 + -14.4  -5.52384   ATGGTGCAGCAGTGA      CGGAGCGCAGGCGGG TTT CCC-CCTGCGCCCTG      TTTTTTTGATACGCC 100 40
C2U40_RS05770 1234708 .. 1234730 + -13.4  -4.65916   AGCGCAGTAAAAGAA           AACGGCGGGA TGA TCCCGCCGTC           TTTTATTGAAATGAC 100 86
C2U40_RS05820 1250598 .. 1250620 + -20.6   -4.8143   CGACATGAAGAGAAC           GAGGCCCCGC AGT GCGGGGCCTC           TTTTTAGGTTCTTCG 100 127
C2U40_RS05830 1252334 .. 1252354 +  -4.6  -3.68936   TCGACGATGGCCACT            CGCCAGGG CTTGC CCTTGACG            TTGTTGCCCTTGCTG  58 435
         azu 1253796 .. 1253812 + -11.5  -5.24531   TGTGCCGATCCAGAA              GCCGGGT ACT GCCCGGC              TTTTTTGTGGCCGCT 100 47
C2U40_RS05845 1254542 .. 1254556 +  -2.9  -4.64383   CATACTGAAATTCAA               TAAGA ATTTC TCTTA               TTTTGGTTTGTAGTT  68 398
C2U40_RS05855 1256589 .. 1256607 +    -8  -2.78384   GCTGGGTAGCCTGCG             GCCGGGCT TGA GGCGCGGC             TGTGATCCGCGCCAA  57 53
C2U40_RS05860 1257039 .. 1257059 + -18.3  -4.02108   CACTCACATAGCAAA            CGGGCCTCC ACA GGAGGCCCG            TTTCGTTATGGTCGG 100 46
C2U40_RS05875 NONE
C2U40_RS05880 NONE
C2U40_RS05885 NONE
C2U40_RS05890 1264785 .. 1264799 +  -2.8  -3.05715   TCATGTACAACCTCA               ACATCA ACA TGATGG               TTCACTGAGCAGGTT  43 3
C2U40_RS05895 1265772 .. 1265797 + -19.1  -3.78934   AAAATCAGTAGAATC         CAGAGCCGGGA ACCT TCCCGGCTCTG          TTATTATGGGGCCGC 100 82
C2U40_RS05900 1267544 .. 1267559 +  -5.4  -3.29829   CCAGGGCAAGTGAAG              GCGG-TG CTT CAGCCGC              TTATCGCCCCGTATG  54 303
C2U40_RS05915 NONE
C2U40_RS05920 1272652 .. 1272665 +  -2.3  -3.61398   CGGCCGACAGCGAGA               TCCGC CACA GCAGA                TTCTTGACCCGCACC  49 418
C2U40_RS05930 NONE
C2U40_RS05935 1276843 .. 1276870 +  -5.4   -5.3167   TCCCGGCACTCTGAC        CCCAAAGGGACG AAAG CGCCCCCTTGAG         TTTTCTTTATTTTTA  91 27
C2U40_RS05940 1278042 .. 1278072 +  -8.3  -3.13403   AGATGCAGCCTGTTA      TGCTCGGGG-GCAT CGCG ATGCACCTCGAGCC       TGTTGATAAGGCAGG  63 467
C2U40_RS06015 1284931 .. 1284945 +  -8.5  -3.18383   GGTTGATAAGCTGGT               GGCGC GACTG GCGCC               TTAATGACTCACAGT  63 7
C2U40_RS06020 1286230 .. 1286245 + -11.8  -4.26188   TCTGTTCATAAAAAA              GGCCGC AGAT GCGGCC               TTTTGACTATATGCG  93 47
C2U40_RS06055 1293794 .. 1293807 +  -2.3  -4.57882   CAGCCTAAAGTGCCC               GCTAC ACTC GGAGC                TTTCTTCTTATTGGC  63 87
C2U40_RS06070 1297967 .. 1297977 +  -4.6  -3.53224   TATGAGGGTGACTGT                 GCGG CAG CTGC                 TTTCAGCAAGGCGTC  53 478
       cas5e 1298935 .. 1298963 +  -2.2  -3.87994   CCGAGCAGCTCGCTG        TCGCTCACCTTG GCAAG CTCGGAGAGCGG        TTTGTCGGGATAGCT  54 271
C2U40_RS06095 1301721 .. 1301747 + -17.2  -2.82015   TTGCCCCCATGCACA         CCCCGTCTCGCC ACT GGCGCGGCGGGG         TGTCGTCCATCTGGC 100 48
C2U40_RS06100 1302342 .. 1302359 + -11.3  -5.60993   ATCGAAAAGCAAAAA             CCTCTGC CCGG GCAGAGG              TTTTTTTATGGCGAA 100 43
C2U40_RS06125 NONE
C2U40_RS06140 1307375 .. 1307385 +  -4.6  -3.94746   GGCGCAATGATTCTC                 GCCT GTT GGGC                 TTTGCTTCGCTCTGC  60 297
C2U40_RS06180 NONE
C2U40_RS06185 NONE
C2U40_RS06190 NONE
        scpB NONE
C2U40_RS06200 1319741 .. 1319761 + -15.4  -4.41047   GGCCGCACTGCAAAA            GGCCCGCC TCTTC GGCGGGCC            TTTTCGTTGGCGCCT 100 58
        tesB 1320798 .. 1320816 +   -16  -5.63504   GCGCCAACAAAAAAA             CGGGAGCC GAT GGCTCCCG             TTTTTTTATGCGCTT 100 51
C2U40_RS06225 1324943 .. 1324957 +  -2.1  -2.65504   AAGTAGGATGGAGTA              GTCGCC TCAT GGC-AC               GATTTTTCATAGACA  38 35
C2U40_RS06230 NONE
C2U40_RS06235 1329542 .. 1329567 + -15.5  -4.64861   GTTATCTTACCGTCA         CAGGGCGAACT ATCA GGTTCGCCCTG          TTTGTTTTGAGCAAA 100 65
        rfbB NONE
        rfbA NONE
C2U40_RS06250 NONE
C2U40_RS06255 NONE
C2U40_RS06260 NONE
C2U40_RS06265 NONE
C2U40_RS06270 NONE
C2U40_RS06275 1337969 .. 1337979 +  -2.6  -5.72207   TCGGTTATTGCTTGT                 TAAT TTG ATTA                 TTTTTTTGGTTTCGA  93 463
        asnB NONE
C2U40_RS06285 NONE
C2U40_RS06290 1343030 .. 1343040 +  -5.4  -3.74077   TATGTGCTGCCAGCT                 TCAG CAG CTGA                 TTTACGTCTGTAACA  61 2
C2U40_RS06295 1344228 .. 1344240 +  -3.3  -2.76815   AGGCACTGCTCATAC                CTGCA AAT TGCTG                CTTCTTCCGCAAGCT  41 163
C2U40_RS06300 1345414 .. 1345436 +    -2  -2.65476   GTGTACAACAACACC           CAGTTGAATA AGG TATTCTAATG           ATTCTACTAACTGGT  38 15
C2U40_RS06305 NONE
C2U40_RS06310 NONE
C2U40_RS06315 1348997 .. 1349009 +  -3.3  -2.89793   TAAACGGTGTGTTTT                ATGGG ATG CCCAC                TGCTTGTGTGAATGA  42 38
        rfbB NONE
C2U40_RS06325 1351172 .. 1351192 +  -6.2  -2.71144   GTAAATCACAGGCCA            GGGATGTA CTGAA TACATCTC            TGGTTGACAGGGATA  51 37
        rfbC NONE
C2U40_RS06340 1353962 .. 1353977 + -11.8  -5.82281   ATGAAATAAGGAACG              GGGGGC TATG GCCCCC               TTTTTTTCTGTATTT 100 48
C2U40_RS06345 NONE
C2U40_RS06350 1356595 .. 1356608 +  -9.5  -5.61596   ATATGTCCATCAAGA               GGCGC CCAG GCGCC                TTTTTTTGTGCGCCT 100 51
C2U40_RS06355 1360654 .. 1360683 + -20.9  -4.01902   GGCTCGGGCTACAGA       CAAGGGGAGCATC CAAT GATGCTCCCCTTG        TTGTTTGGTACGTGT 100 53
C2U40_RS06365 1362393 .. 1362409 +  -4.4   -4.3129   GCGTGGTTGATCTGC             CG-GGCA AGGA TGCCTCG              TTTTACTGCTGACTC  67 31
        astE 1363786 .. 1363809 +  -9.6  -4.30161   CCGCCCCCATCCTGA          CAGGGAGC CCGATGCA GCTCCCTG           TTTCGTTTTCTCTCA  86 123
        pdhA NONE
C2U40_RS06380 NONE
C2U40_RS06385 1367144 .. 1367171 + -18.6  -3.97674   CCCCTCATTGTGACA        TTTGTGCCCTGC CGTG GCAGGGCACAAA         TTGTTTGCGTAATCC 100 28
C2U40_RS06390 1367576 .. 1367600 + -11.3  -5.38054   ACAGAATTTAAGAAA          GCCGTGGTGCC TCT GGTTCCGCGGC          TTTTTGTTTATGGAC 100 46
C2U40_RS06395 1368284 .. 1368299 +  -5.4  -4.14725   CTTTAGTGGGCGCTG              GCTCAA ACTA TTGGGC               TTTCTCCTTTCCATG  65 327
C2U40_RS06405 1369038 .. 1369048 +  -6.8  -2.96216   TGAGATCGCGAAAAA                 TCGG TGA CCGA                 TCTCTCATACTGGAC  54 38
C2U40_RS06410 1369551 .. 1369572 +   -13   -5.1356   CCCGGTAGCAAAAAA           GACCCCGC CACTGT GCGGGGTC            TTTTTGTTGGTGGCC 100 65
         fsa 1377622 .. 1377643 +  -3.5  -2.70932   GTTTGACGAGGATTG           GCAGCGGGC GTTT GCCTGAGGC            TGCTTGAAGGCAGGA  43 7
C2U40_RS06445 1378319 .. 1378335 +  -3.6  -3.54424   CTCATGCGGGTATAG              AGCGAG AGCTG CTCGCC              TTTGAGCCGCTGCGG  51 416
C2U40_RS06455 1380231 .. 1380255 +  -2.8  -3.29511   GTTGATGCCGATCAT         CCCCAAT-ACC TGGC GGTTGATGGGG          TTGTGCGGCAATGAC  46 268
C2U40_RS06465 NONE
C2U40_RS06470 1383687 .. 1383703 + -10.1  -2.71681   CTGCCAGCTCGGGCA              GCGCCAG CGC CTGGTGC              TGCTTGAGCAGGTTG  60 391
C2U40_RS06490 NONE
C2U40_RS06495 1386811 .. 1386844 +  -6.1  -2.64107   AATCCCTCTTTGGCA     CACCTCTTGCT AATAATTTCTCA AGCAGGAGGTG      TGCTATGGCAATTTC  50 51
C2U40_RS06500 NONE
C2U40_RS06505 NONE
C2U40_RS06510 NONE
C2U40_RS06515 1389775 .. 1389790 + -11.8  -4.73388   CCTCTTGTTAACAAA              GGGCGC TACG GCGCCC               TTTTTCATGGGGATT 100 45
        flgF NONE
        flgG NONE
C2U40_RS06530 1392108 .. 1392129 +  -2.1  -2.53822   CAGCTTTTTCAATGG           CCCCTGGTG GCCG CTCTAGGAG            GTGTTATGAAGTCGC  38 7
C2U40_RS06535 NONE
C2U40_RS06540 NONE
C2U40_RS06545 NONE
        flgL 1397586 .. 1397636 + -17.5  -3.16564   GACTACATTCGTTGA CCGGTCACCCATCGCTCGCGGCC CTGAT GGCTGCGAGCGATGATTGCCCGC TTGGCTCCTGTTTTT 100 26
        mgtE 1399457 .. 1399474 + -12.7  -5.50925   CCCGCAAATGCAAAA             GGCAGCC CATG GGCTGCC              TTTTTTGTATTGGTT 100 49
        gmhA 1404738 .. 1404748 +  -6.8  -3.01712   CCTTGTCTGGCCGTG                 TCCC GGC GGGA                 TCTTGCGCAAGCGGC  56 70
C2U40_RS06575 1405644 .. 1405665 + -14.5  -3.61398   AGAGATAAAAAAATA           CCAGGGTAG AATC CTACCCTGG            TTCTTCGCAGCAGCC 100 55
C2U40_RS06580 1406544 .. 1406554 +  -4.6  -4.07568   GCAGGCTGAGCTGGC                 TGGC AGG GCCG                 TTTTCGGGGACCAGA  63 298
C2U40_RS06590 1408647 .. 1408664 +    -2  -3.30124   GAGGCCAAATACCGC             CAGGAGT CGCAA AC-CCTG             TTGTGCGGGGTGGCG  45 140
C2U40_RS06595 1410654 .. 1410676 + -12.1  -2.77013   CGTAGCTAAAAAAAA           TGGTCAACC TGGGT GGTTGACCA           ATTCTTCAGCAAATA  77 32
C2U40_RS06615 1415157 .. 1415180 +  -3.8  -4.21772   TAAGCAATCCTCAAA          TGGGGGTA TTTTGCCT TGCCCCCG           TTGTTCTTTATTGCG  62 75
        napF NONE
C2U40_RS06625 NONE
C2U40_RS06630 NONE
C2U40_RS06635 1419541 .. 1419551 +  -3.2  -2.57132   CCCGCAAACCGGAGG                 GGCT ATG AGTC                 GTTATCCGGGAGCCG  40 18
C2U40_RS06640 NONE
C2U40_RS06645 NONE
C2U40_RS06650 1421490 .. 1421511 + -17.3  -3.36273   TAAACCCACCTGATG           CAGGCCGGG TTCG CCCGGCCTG            TTCATATTCCGCCCG 100 38
        moaB NONE
        moaC NONE
C2U40_RS06665 NONE
C2U40_RS06670 1423508 .. 1423537 +  -7.8  -3.63744   GCTTGACCTGTTCAA       GGGGGC-TGGCTC ATCGG GAGCCGCGGCCCC       TGTTTTCGGGGCCGC  66 35
        modA 1424358 .. 1424382 +   -10  -4.13945   ACACCTGCCTGATGA         GT-GGCCGGCC CTCG GGTCGGCCCAC          TTTTGCCATAAGGAT  83 53
        modB NONE
        modC NONE
C2U40_RS06690 1427178 .. 1427224 + -16.7  -4.39166   TATCCCGTGTATGTA TTGGTCCGATCGCCTTGCC ACGCAAAAA GGCAAGGCAATCGGACCCA TTTTGCTCTATCAAC 100 55
C2U40_RS06695 NONE
C2U40_RS06700 NONE
C2U40_RS06705 1429503 .. 1429516 +  -6.7  -4.41158   TTTGATAATGTGCGC               GCACT CAGG AGTGC                TTCTTTATTTATATC  75 95
C2U40_RS06710 1429924 .. 1429942 + -12.4  -5.49234   CGCATGTTGCAAAAA             GCCGACCT CAT GGGTCGGC             TTTTTTGTTGGGTGT 100 52
C2U40_RS06745 NONE
C2U40_RS06750 1439214 .. 1439232 +  -3.8  -3.02096   GGGGGGGAAGGGGCT             TATCATGC CCC GCATGGCA             TATCTGGTTGCTCGA  46 57
C2U40_RS06755 NONE
C2U40_RS06760 1440279 .. 1440296 + -10.5   -5.5762   AAAAATGACTCTGAA             CGGTGCC TGTG GGCGCCG              TTTTTTGTGTTTAAT 100 54
C2U40_RS06765 1441130 .. 1441145 + -11.8  -5.18355   CGTGTAGCCATCAAA              GGCGGC CTGT GCCGCC               TTTTTGCTTTTTGCC 100 48
        uvrC 1443303 .. 1443315 +  -3.3  -3.75105   AAATGCCATAATGGC                CCGCA TCC TGAGG                TTGTTGATGGATTCA  53 182
        pgsA 1444059 .. 1444073 +  -2.1  -3.10589   AAAGGGCAAAAAACA              CCC-GA ACGA TCAGGG               TATTAAACATTTTTG  42 114
C2U40_RS06780 1444241 .. 1444253 +  -7.7  -4.18197   CAAATTCAGACAATA                GAGAG TTT CTCTC                TTTTGCATGGCGCGT  76 39
C2U40_RS06785 1444345 .. 1444359 +    -7  -3.16742   CCTCCATATTGACAA               GCCCGC GGT GCGAGC               TTGATACCGATTACG  57 34
C2U40_RS06790 1444485 .. 1444504 + -13.6  -5.65496   TCAAAGACTTACTAA            GGCCGCTA GCAA TAGCGGCC             TTTTTGTTTTTCATC 100 47
C2U40_RS06805 1448718 .. 1448739 + -15.9  -4.25056   GACGAAATGATGAAA           GAGGGGAGC CTGG GCTCCCCTC            TTTATTGCTGGGCTG 100 125
C2U40_RS06825 1454875 .. 1454892 + -11.3  -5.06414   TTCATGACCGTCAAA             GGAGCTG TCAC CAGCTCC              TTTTTGTTGCCAGGC 100 99
C2U40_RS06830 NONE
C2U40_RS06835 1456289 .. 1456307 +  -7.4  -2.85354   GCTGACAGGAGGGAG             GCACCATG TGG CATGATGC             GTTTCACTTCGACTC  58 69
        nrfD 1457280 .. 1457296 + -13.7   -5.4505   CGCAGGCAAACAAAA              GGCGGGA TCT TCCCGCC              TTTTTTATTGCCGCC 100 58
C2U40_RS06860 1460868 .. 1460913 + -18.5  -2.87931   GAGCCAACAGGTTGA GCCAATAAAAAAACCGCAGCC TTAG GGCTGCGGTTTTTTTGTGGCC TGTCTGAGAGCTGGC 100 65
C2U40_RS06880 1467369 .. 1467397 +  -2.9  -3.29511   CGGCTCAGATCGGGC        CGCCCCGCGTTGG CTG CAAACGGAGCGCG        TTGTCGGACAATCGA  47 487
C2U40_RS06885 1468576 .. 1468593 + -14.1  -4.72272   GCGAGACAAACAAAA             GGGGCCC CGGC GGGCCCC              TTTTTCATGCCGCCC 100 49
C2U40_RS06925 NONE
C2U40_RS06930 NONE
C2U40_RS06935 1477009 .. 1477027 +   -16  -5.06816   TCAGATATATAAAAA             GACCCGCC GCT GGCGGGTC             TTTTTATTGGCGCGT 100 63
C2U40_RS06960 1481671 .. 1481685 +  -2.1   -4.7497   CCTCGGGTAGTAACA              CGC-TG TTAT CATGCG               TTTTTCATGACTCGC  68 41
C2U40_RS06965 1482771 .. 1482785 +  -8.5  -3.14132   GCACCTGATCTCCTC               GGGGG CCAGC CCCCC               TTGCTGGCGGCCCGC  63 33
C2U40_RS06970 1483547 .. 1483569 + -11.3  -4.56597   GTGAGAGACAAGCAA          GGCCCT-GGC GTCA GCCGAGGGCC           TTTTTGAAGAAGACG 100 37
C2U40_RS06985 1485784 .. 1485802 + -11.7  -4.72272   TCGCAGCATAAAAAA             GCCCGTC ATCAC GACGGGC             TTTTTGCTGGGCGGC 100 187
C2U40_RS07010 1491381 .. 1491396 + -11.8  -5.52023   TTTGTCTGTTAAAAA              CCCCGC TCAT GCGGGG               TTTTTTATTGGTGAT 100 97
C2U40_RS07015 NONE
        carB 1496433 .. 1496452 +   -15   -5.4505   TGTGACCCGATAAAA            CCCCGCCA GCGA TGGCGGGG             TTTTTTATTGGCAAA 100 71
        leuA 1498556 .. 1498582 + -18.7  -3.54297   CGTCTCGACCCTTGG         GGGCCCTCGCC ACACA GGCGGGGGCCC         TTGTCATTGATGGCT 100 50
C2U40_RS07030 1499887 .. 1499912 + -19.1  -4.57353   CTGTAACTGCAATAA         CAAAGGCGGCC AATG GGCCGCCTTTG          TTTTATGTCGTGAAG 100 35
C2U40_RS07045 1503785 .. 1503814 + -10.8  -5.52384   GACGCCGTTTTGCTG      TCTGGGCCC-CTCC AGCC GGAGCGGGCCC-GA       TTTTTTTGCTGGCCC 100 39
C2U40_RS07050 1504654 .. 1504676 + -12.7  -3.16338   ACCGCATTCGCTGAC          CGGCCGGGGC AGGG GCCCCG-CCG           TCTGTTGCTCTCACT  81 27
C2U40_RS07055 1505457 .. 1505475 + -10.3  -4.21194   ATGTCAGGCACAGCC             GTCGGTG GTCTG CACCGAC             TTTTCGCTCATGCCG  85 197
C2U40_RS07060 1506858 .. 1506882 + -20.1   -3.0682   CCGCTCTATTGAACC          GCAAAGGCGCC ACT GGCGCCTTTGC          TATCTCTGTCATCGG 100 51
C2U40_RS07065 1507597 .. 1507615 + -13.1  -5.24129   TTCATTTGTCTGATA             CCCCGGC CCGGT GCCGGGG             TTTTTTATGGGCGCG 100 52
C2U40_RS07070 1508895 .. 1508910 + -11.8  -3.83568   CTGATTTGCCGACCG              GGGGCC GCAA GGCCCC               TTCTTGTCCATGTCG  88 37
C2U40_RS07075 1509380 .. 1509393 +  -4.5  -2.81133   CGGCTGCCCGCCTCC               TAGGG CAGC CCCTG                TGTACTACCTAGATG  46 23
        soxR 1510966 .. 1510977 +  -3.6  -3.55444   AGCCATGCCATGCAC                CGGG CCGA CTCG                 TTTACACCGTCAAGG  51 60
C2U40_RS07090 NONE
C2U40_RS07095 1512001 .. 1512035 + -12.9  -3.14132   GCAACCCGCCTGATA    TGGTTTCCGCTGGCGG AGCG CCGCCAGCGGGG-CTA     TTCCTCGGCCAGCCC  85 28
C2U40_RS07100 NONE
C2U40_RS07105 NONE
C2U40_RS07110 1514547 .. 1514568 + -17.3  -3.93288   GCGATATAAAAAAAA           CAGCCCCGC ACGA GCGGGGCTG            TTTGCTTGGCTGCGA 100 61
C2U40_RS07125 1522322 .. 1522332 +  -3.2  -4.03413   TGATCCCTTCTCGGG                 GAGC TCT GTTC                 TTTATGTCACGGGAT  58 322
C2U40_RS07130 1524561 .. 1524581 +  -2.6  -3.34398   GCGTGTGCAGGAGGC            GTCCAA TGGCTAAGT TTGGAC            TGTTTAAGAAGGCGC  45 13
C2U40_RS07135 NONE
C2U40_RS07140 1527381 .. 1527411 + -21.2  -3.58726   TTGATGCGAGTGAAA       GGGATGGCTGCAGC CGG GCTGCCGCCATCCC       TTGTCTCTGACGGCC 100 58
C2U40_RS07145 NONE
C2U40_RS07150 1530177 .. 1530192 + -11.8  -5.88565   TTATCAAATCAAAAG              GGGCCC ATAA GGGCCC               TTTTTTTATTCTAAA 100 44
C2U40_RS07170 1543661 .. 1543687 + -12.2  -5.08824   ATCCGTAACCAGCCA         AGGGGGCCGGGT AAT ACCTGGCCCCTG         TTTTTTGACTGAGGG 100 33
C2U40_RS07175 1544322 .. 1544346 +  -8.6  -5.71712   GACGACGGGCATAAT          GACCTCACTC CAATA GATTGAGGTC          TTTTTTTATGTGGCG 100 50
C2U40_RS07180 1545088 .. 1545121 + -16.9  -4.56597   CTACCTGCCTTTTTG     CAACAAGCCCGAGCGC TCT GT-CTCGGGCTTGTTG     TTTTTAGACGAGCAA 100 55
C2U40_RS07190 1547339 .. 1547364 + -19.1   -5.4756   AGGTCCAGTCGACAA         GCGCCGGATAC GGTT GTATCCGGCGC          TTTTTTATTGGCGTT 100 40
C2U40_RS07200 1550941 .. 1550958 + -12.7  -4.72272   CAGCCCCCATCAAAA             TGGCGCC CACG GGCGCCA              TTTTTCATGGCCGAA 100 52
C2U40_RS07205 1552245 .. 1552283 + -10.8  -3.07344   CATTGCTGAGGAACT   ATCGGGCAAGGCCAGGCT GGG AGCCCGGCCGTGCCTGCC   TCTGTTAGCGGGTGA  72 78
C2U40_RS07240 1561133 .. 1561152 +   -15  -5.74122   GGCTTTGAACAAAAA            CGGGCACC CGCG GGTGCCCG             TTTTTTTGTGTCGTG 100 56
C2U40_RS07250 NONE
C2U40_RS07255 1564609 .. 1564634 +  -5.3  -2.61272   ATGGGGTGGATGTGA         C-CGGGGGCGCA CTC TGCAGCCCCGAG         AATTTTTCGCGATAT  47 101
C2U40_RS07260 1567031 .. 1567058 + -21.4  -4.76041   CGCATAGTGGTGAAA        CAAGGGGCAGCC GATG GGCTGCCCCTTG         TTTTTGGTACCTGTG 100 49
C2U40_RS07265 1567976 .. 1567988 +  -3.3   -4.7497   TGCCGGACTCGGCAC                CGGGT ACG ACCAG                TTTTTAGTAACTGGC  71 6
C2U40_RS07270 NONE
C2U40_RS07275 1570314 .. 1570326 +  -4.1  -3.54129   AAAGGTAGGATTCAA                CTTGG CCT CTAAG                TTTCAAAACCGTCTG  51 99
C2U40_RS07280 1571138 .. 1571167 + -13.7  -5.47821   GACAAGGTAAAAAAA       TACCGCGCTGCATC TTG GATG-GGCGCGGTA       TTTTTTTAGATGCAT 100 48
C2U40_RS07300 1574794 .. 1574820 + -23.8  -4.34402   GCCATCTTCAGAAAA         GCCCCCGGCAAC CTG GTTGCCGGGGGC         TTTTGCTATCCGGCC 100 37
C2U40_RS07350 1583210 .. 1583228 +  -6.6    -3.484   GGTGAAGGAGGGGGC             GGCCCATG GCA TACGGGCC             TTCTGATCTGATGGG  61 1
C2U40_RS07355 NONE
        sycN 1583909 .. 1583923 +  -4.2  -3.53444   ATCGCCTGCTTTGAC               GAGATC ACT GAGCTC               TTTCGCAAGGGATGG  51 70
C2U40_RS07365 NONE
C2U40_RS07370 NONE
C2U40_RS07375 NONE
C2U40_RS07380 NONE
C2U40_RS07385 NONE
C2U40_RS07390 NONE
C2U40_RS07395 NONE
C2U40_RS07400 NONE
C2U40_RS07405 1591118 .. 1591133 + -11.8  -5.77632   ACCAATGTGTGTCAA              GCGCCC ATCC GGGCGC               TTTTTTTATCATTTT 100 51
C2U40_RS07410 NONE
C2U40_RS07415 NONE
C2U40_RS07420 1592297 .. 1592310 +  -3.1  -3.61398   ACTTGCTATCCATTA               TGTCA ATAA TGACG                TTATTCACAAACAAC  51 17
C2U40_RS07425 1593460 .. 1593482 +    -7  -5.28176   CATGGCAAAGATTAA           CGTCGGACTA AAA TAATCTGACG           TTTTTTATAAGTCAG  95 26
C2U40_RS07430 NONE
C2U40_RS07435 NONE
C2U40_RS07440 NONE
C2U40_RS07445 NONE
C2U40_RS07450 NONE
C2U40_RS07455 NONE
C2U40_RS07460 NONE
C2U40_RS07465 NONE
C2U40_RS07470 NONE
C2U40_RS07475 1600344 .. 1600363 +  -3.4  -3.15544   CTGGCCCAGTACATG            TGGCACCG GAGC CGGAGTCG             TTGATGACGGTAGGC  45 2
C2U40_RS07480 NONE
C2U40_RS07485 1601762 .. 1601788 + -23.8   -4.8048   CCATATTCAGAAAAA         GCCCCCGGCAAC CTG GTTGCCGGGGGC         TTTTTGCTATGCAGG 100 180
C2U40_RS07500 1605931 .. 1605947 + -13.7  -5.27335   CCATATTGAGATAAA              GGGGAGC CTG GCTCCCC              TTTTTATTTGGGCGC 100 43
C2U40_RS07505 NONE
C2U40_RS07510 NONE
C2U40_RS07515 1609642 .. 1609695 +  -8.2  -2.74605   ACTGCAATAAATATC GCGTGCCGGCAGGAAATATTGATT TAAATC AATGATTATTTCCTGCCGACCCGA TCCATTTTCGGCCCG  60 31
C2U40_RS07520 1611369 .. 1611398 + -20.9  -3.30159   CTGCCATCCATACAA       CAACAAGGCCACC CGCG GGTGGCCTTGTTG        TTGTAGGGGGCTTGG 100 47
C2U40_RS07530 NONE
C2U40_RS07535 1614417 .. 1614463 + -16.6  -2.55668   TCCCTGTAAGGCAAA GCTGACAGCCTTGCGGGGCGC CACCGA GCGCGCCACAAGGCTG-CGGC CTTAATGTCACAATC 100 32
        hppD 1615751 .. 1615763 + -10.5  -2.66274   GATGCGTAACGGGAG                CCGCC ACG GGCGG                GTTGGTTGTCAAGCA  69 32
C2U40_RS07545 1617000 .. 1617013 +  -2.3  -2.87132   GTTGACAGACAGGGT               GCTGG TAAA CTGGC                TGTCTCCAAACACAC  41 73
C2U40_RS07550 NONE
C2U40_RS07555 NONE
        maiA 1619988 .. 1620029 + -29.5  -3.12351   TACCCAACCCTGACA TACGGCAGGCCGGGCCTGG TCAT CCCGGCCCGGCCTGCCGTG  TTCACTCTGCCAACA 100 28
C2U40_RS07600 1628883 .. 1628925 +  -5.5  -4.07568   GATTCAGGCCGTGTG GGGC-TGGGGGGCTGCCTGA TAGG TCGGGTAGTCAATCAAGCCC TTTTCGCCGCCACCG  65 66
C2U40_RS07620 1636161 .. 1636180 +  -3.4  -2.82635   GCTCAAGCACCCGCT            GCAGGCCC TGCT GGAACTGC             TCTGATGCTGACGCT  41 1
C2U40_RS07625 1636692 .. 1636711 +  -9.3  -6.17184   TCAACCTCGATACAA            GATGCCC CAGCGT GGGCATC             TTTTTTTTTGGTCCT 100 44
C2U40_RS07630 1637372 .. 1637392 +  -3.1  -4.87626   AAGACAGCAGAACAA            AGTGGCGCT ATA ATCGCCGCC            TTTTTGCTATTCCGC  71 136
C2U40_RS07635 1639359 .. 1639377 +   -16  -5.07486   ACTGCTAGCTAAAAA             GGCCGCTC ATC GAGCGGCC             TTTTTGTTGCCCGTC 100 47
C2U40_RS07650 1644056 .. 1644069 +  -2.3  -2.75963   TGATGGACGCCGCCT               CGACC CACT GATCG                GTTTGCCCTAAAGCT  39 15
C2U40_RS07655 1645032 .. 1645047 + -10.4  -4.82678   CGAATCCATAAAAAA              GAGCGC CTTG GCGCTC               TTTTGGTTTTTCTGG 100 47
C2U40_RS07700 1653629 .. 1653662 +  -2.2  -3.06796   AGGCGCGTGCGGATG     CCAGCGGCCACCAC AGGATC GTGATGGCCGCAAA      TTGACTACAGTCAGG  42 2
C2U40_RS07705 1653924 .. 1653942 +   -16  -4.46212   TCGGAAGATAAAAAA             CACGGGGC CTG GCCCCGTG             TTTTGTGATGGCGAG 100 49
C2U40_RS07715 NONE
C2U40_RS07720 1656799 .. 1656818 +   -15  -5.40072   TGACCCAAGTGAAAA            CAGGGCCC CGCG GGGCCCTG             TTTTTTTGGCAAAAA 100 44
C2U40_RS07725 1658452 .. 1658467 + -10.4  -4.73388   GACAGACAAAAAAAA              GGCTCC CGCG GGAGCC               TTTTTCATGAGCCTT 100 58
C2U40_RS07735 1660315 .. 1660330 + -11.8  -4.57569   ATTGACCATGAAAAA              GGCGCC TGAC GGCGCC               TTTTTCACAACGTGA 100 49
C2U40_RS07795 1676076 .. 1676094 + -11.7  -5.44198   GTCTGTTTCGTTGGA             GCCGGTC CTCGT GACCGGC             TTTTTATTGTTTCTT 100 46
C2U40_RS07800 1677983 .. 1678002 + -16.4  -4.15044   TCGCATAACAAAGCA            GGCCCGCC GGAT GGCGGGCC             TTTATTACAACCGCG 100 54
C2U40_RS07805 NONE
C2U40_RS07810 NONE
        oppD NONE
C2U40_RS07820 1682010 .. 1682032 + -16.3  -5.14563   GGTGAGCAGGCAGAA           CAGGGCGCC CGGGT GGCGCCCTG           TTTTTTGCTGCCGGC 100 42
C2U40_RS07825 1683262 .. 1683279 + -12.7  -5.17576   AAGCATTAACAAAAA             GGGCTCC CGCG GGAGCCC              TTTTTTAGGTTCATC 100 56
C2U40_RS07840 1686515 .. 1686534 + -16.4   -4.1399   ATGAAGCATAAAAAA            CGGCCCGC AAAT GCGGGCCG             TTTGTATGTGAATGA 100 57
C2U40_RS07865 1691275 .. 1691300 + -20.5  -2.71144   CTTGCCAGTAAAAAA         CAAGGCCCCGC ATCT GCGGGGCCTTG          TCGTTGCCGGGGCTG 100 51
C2U40_RS07875 1693957 .. 1693975 +    -8  -3.09516   CGCGCCTTCCGCTGG             CCGGTCTG CTG CTGGCCGG             TTCCCTGCTGGGGGG  59 44
C2U40_RS07880 NONE
C2U40_RS07885 NONE
C2U40_RS07890 NONE
C2U40_RS07895 NONE
C2U40_RS07900 1698205 .. 1698232 +  -9.9  -3.78934   GCCAAGGGGGCCGCA       GGGCA--GGGGCC GGCC GGCCCCCATGCCC        TTGTTCTGGCGGGGC  79 45
C2U40_RS07905 1698754 .. 1698774 +  -8.9  -2.90496   GTCAGAGTTACCTCG            CCTGATCCC GAT GGGGTCCGG            TCCTTTCGCACCACC  61 21
        secD NONE
        secF 1701757 .. 1701772 + -11.8  -5.61596   CATTCCCATGCAAAA              CGGGCC CTCG GGCCCG               TTTTTTTATGCGCAT 100 47
C2U40_RS07925 1703661 .. 1703685 +  -9.3  -3.24747   TCTGTTGCCTCGGAT         GGGGGCTAGG CAAGGA CCT-GCCCCC          TTCGTACTATCCGGC  67 108
C2U40_RS07930 NONE
C2U40_RS07935 1707461 .. 1707487 + -25.2  -5.60993   GCTTGCTGAATGAAA         CCGCCGGGCAGC AAT GCTGCCCGGCGG         TTTTTTTATGGGACG 100 46
C2U40_RS07945 1709955 .. 1709971 + -13.7  -3.30701   GGATTCAACTATCAA              GGGAGCC GAT GGCTCCC              TTCGCTTTAATGGAA  95 57
C2U40_RS07950 1711362 .. 1711381 + -13.6  -5.28176   GCGCACTATGAAAAA            GGAGAGGC CTTG GCCTCTCC             TTTTTTGTGGCTGGG 100 93
C2U40_RS07970 1715252 .. 1715272 + -14.1  -5.28778   GCTGTTGTGGCAAAG            GCCGATAAC CTG GTTATCGGC            TTTTTTGTGGGTGCT 100 53
C2U40_RS07975 1716126 .. 1716151 + -11.1  -5.36441   ATCTCGAGGGGAACA         GCGGTGCAGGC GATG GCTTGTGCCGC          TTTTTTGTGTGGCCA 100 51
C2U40_RS07985 1718476 .. 1718509 + -18.3  -2.87564   GCCGCATCGGCACAT     AGACAAAGAGGTCGC CTGG GCGACCTCTTTGTCA      TCTGTCCCGCGGTAG 100 60
C2U40_RS07995 1722176 .. 1722207 + -21.8  -3.70149   GCGTATCACCCTATA      TAAAGAGAGGGGCC AGCC GGCCCCTCTCTTTA       TTTCCATGCTGTGCC 100 66
C2U40_RS08010 1726273 .. 1726288 + -11.8  -4.86033   ATTGAAAAAGAAAAA              GGCCGC GTTT GCGGCC               TTTTTATCGGGCTTT 100 74
C2U40_RS08035 1728688 .. 1728704 +  -5.8  -3.72893   CCCAGCCCGGCTGAA              TCGGCG CCAGC CGTCGA              TTTGATGCGGCCCTG  63 27
C2U40_RS08040 1729258 .. 1729282 + -18.6  -5.14563   GCGTGGAATAAGAAG          GGGCCGCAGC CCGGT GCTGCGGCCC          TTTTTTCATGAGGAA 100 48
C2U40_RS08055 NONE
C2U40_RS08060 NONE
C2U40_RS08065 NONE
C2U40_RS08070 NONE
C2U40_RS08075 1738101 .. 1738136 + -23.6  -2.78816   AGGCGGCGAAATAGA    TAATCCCCTGGCAGAA TATA TTCTGCCAGGGGATTA     TCTCATGAAGAGTGA 100 27
C2U40_RS08080 1740535 .. 1740564 +  -7.9  -3.26779   TCACCATCACCACCA       TACCAATGACCTT TATT AAGGTCATAGGAA        TATATATTTTCCAGC  58 270
C2U40_RS08105 1745954 .. 1745988 + -17.3  -3.56544   AAGGTGCAGATAACA    CAAGGCCG-CC-CCTGC GAT GCAGGTGGGCGGCCTTG    TTGCTTGTTGGTGGT 100 79
C2U40_RS08160 NONE
C2U40_RS08165 NONE
C2U40_RS08170 1758576 .. 1758609 + -22.7  -3.89346   TCACCGCCAAATAAA     GTAAAAGGGCCTGTC TTTC GACAGGCCCTTTTAC      TTTATCCGGTGACGG 100 32
C2U40_RS08180 1760249 .. 1760298 + -22.1  -2.78495   CTTCCTTGAACCGGG CAGCAGGGGAGCCCTTCATCCCA ACGC TGGGAGGAAGGGCGCCCCCGCCG TGGTATTGCTGCTCC 100 32
C2U40_RS08235 NONE
C2U40_RS08240 NONE
C2U40_RS08245 NONE
C2U40_RS08250 NONE
        hybD NONE
C2U40_RS08260 1778807 .. 1778818 +  -2.2  -3.59979   CAGCGCTAGGTCTCA                TCTG CAAT CAGG                 TTTAGAATAGGGGCC  49 32
C2U40_RS08265 1780521 .. 1780536 +  -4.6  -2.56596   CAACCTGCAGGATTG              GCGGTG GACG TGCCGC               TAAGTTCGTCCACCA  45 7
C2U40_RS08270 NONE
C2U40_RS08275 1782344 .. 1782378 +  -7.9  -3.06915   GAGTTTTGAAAGCGC    CATCTGGCGTCAGCACA GTC TG-GCTGGCGCC-GCTG    TTCGATCAGGTGGCT  59 39
C2U40_RS08280 1783197 .. 1783211 +  -4.2  -3.84648   AGTTCAATGCACTCT               TCTCTG TGC CGGAGG               TTTCCTGATGTTGGA  56 3
C2U40_RS08285 1784095 .. 1784120 + -19.1  -3.26319   AGATAACAGATAGAA         GAGAGGGAGGC ATCA GCCTCCCTCTC          TTGCTATCCGCCGTT 100 260
C2U40_RS08380 1806985 .. 1806997 +  -5.5   -3.5125   GCGCGGGTGTGAGCG                GGCTT GCC GAGCC                GTTTTTCGTTAACAA  56 29
C2U40_RS08385 1809185 .. 1809224 +   -15  -2.62513   TAATCGTCGTTAATA  AAGTGGATCCAGGCTCTG TATA CAGGGCCCGGATCCGCTC   ATCCTTTTTTCAGCT  90 38
C2U40_RS08390 1809692 .. 1809731 +  -3.5  -3.34398   AGAGGATGGGCCAGT  TGGCGGCGATATGCGGCG AATGA CGGCG-ATAGTGACGCCA  TATTTGGGCGCGGCG  49 65
C2U40_RS08395 1812130 .. 1812150 +    -4  -3.35813   AGATCCCCGCACCCT            CAACTAAG GGGCA CTTAGATG            TTGCTTGAACTCGAC  49 19
C2U40_RS08400 1813025 .. 1813041 +  -3.6  -2.82516   ACAAGGCCATTGGCG              CTCGGG GTTGG CTCGGG              TATAGTCCTGCGCCA  43 45
C2U40_RS08405 1813812 .. 1813825 +  -9.5   -5.4833   GCAGCAATACCAGAA               CCCGC CCCG GCGGG                TTTTTTGTTGGGTAA 100 104
C2U40_RS08415 1815886 .. 1815909 + -14.6  -4.77173   CCAGGCATGATGTTT          GGGCCCACTG CGTG CAGTGGGCTC           TTTCTTTTCTGGCGC 100 31
C2U40_RS08425 1816834 .. 1816850 + -11.5   -4.2528   GTGCCAGTGAGACAA              GGGCCCG GCA TGGGCCC              TTTCTTGCATTCAGA  93 80
C2U40_RS08430 1817873 .. 1817909 + -13.6  -2.77182   AGCTGGCCTGACAGA    CATACAGCCGGTGCCG CCCAT CGGCACCGGCTGCCAG    TCGTTCGCTATCCAA  85 30
C2U40_RS08435 1818354 .. 1818372 + -10.3  -5.54894   TGTTCGCTGCAAAAA             CCACCTC CTTGC GAGGTGG             TTTTTTTGATGGGTT 100 45
C2U40_RS08440 1819840 .. 1819857 + -12.7   -4.4009   CCCTTGCGCTGAAAA             CGCCTCC TTCG GGAGGCG              TTTTGTCAGGTAAAA 100 47
C2U40_RS08445 1820411 .. 1820432 + -10.9  -5.60993   CCCGTCTGATGAGAA           CCGATATCC GCGA GGATGTCGG            TTTTTTTATGGCCGG 100 68
C2U40_RS08450 1821116 .. 1821126 +  -6.8  -3.29144   CCACATACATGCCCT                 GCAG CAG CTGC                 TTCTGGCCCAGCTGC  55 110
        glgC 1824121 .. 1824137 + -13.7  -4.24745   ACACAGACAAAAAAA              GGGAGCC CTG GGCTCCC              TTTCTATTGGTGGTC 100 49
C2U40_RS08475 NONE
        entE NONE
C2U40_RS08485 NONE
C2U40_RS08490 NONE
C2U40_RS08495 1834963 .. 1834988 +  -6.1  -3.49475   ACGGCAGGGGGTCAA         GCTGGCGCT GAACGACA AGGGCCAGC          TTATCTCCCAGTCGA  58 90
C2U40_RS08500 NONE
C2U40_RS08505 1842761 .. 1842782 + -15.9  -3.87075   GCAGCAGATAAAAAA           GAAGCCCGC AAAT GCGGGCTTC            TTTGTGGGCGCTGAT 100 48
C2U40_RS08515 1844712 .. 1844725 +  -9.5  -5.22312   GCAAACATCAAAAAA               CCGCC TCTC GGCGG                TTTTTTGATGTGGCT 100 59
C2U40_RS08545 1852238 .. 1852252 +  -5.6  -2.83164   GGCGCCTGAGCCAGG               CCCGGA GGC TGCGGG               TCTGCTGATAGGTGC  48 248
C2U40_RS08565 NONE
C2U40_RS08570 1857625 .. 1857643 + -10.3  -5.36441   GCATGTTCTCTGCAA             GCCCTGA CCCGT TCAGGGC             TTTTTTCTGTCGGCG 100 95
C2U40_RS08575 1858874 .. 1858900 + -19.4   -5.1101   GTTTTTCCCCGATTG         CCGACGCCGGGG ACT CCCCGGCGTCTG         TTTTTTCCGTGATGC 100 44
        aroA 1860317 .. 1860340 + -15.3  -4.45117   CGCGCGTGATGAACC          CAGGCCCGC CTCGCT GCGGGCCTG           TTTCTTTGGGCTGTC 100 32
C2U40_RS08585 1861634 .. 1861652 +   -16   -5.4505   ACACACACAACAAAA             GCGCGACC CTG GGTCGCGC             TTTTTTATTGGCCAG 100 80
C2U40_RS08595 1864956 .. 1864982 + -18.1  -3.46212   AGAGAGGATGATAAA         CAAGGGGGCAC CTGAT GTGCCCCCTTG         TTCGTTATGGCTGGT 100 67
C2U40_RS08630 1873531 .. 1873570 + -10.6  -5.26316   CCCCAACTATCGGAT  GGGCTGATAAAACGGGGC TGCG GCCCCGTTTCTCCACCCC   TTTTTTATCCCGTGC 100 19
C2U40_RS08635 1875255 .. 1875271 +  -9.4  -5.27023   TAAAAATGTAAAAAA              GACGCC CTTGC GGCGTC              TTTTCTTTTTCCAAT 100 70
C2U40_RS08640 1875925 .. 1875954 + -18.1  -3.70919   TCCAAATCCTGAAAA       TAAGAAAGACGCC TTAG GGCGTCTTTCTTA        TTGTTGGAGTTTGCA 100 89
C2U40_RS08645 1880342 .. 1880354 +  -7.7  -2.92449   TCACTCATACCTTGC                CGCTT CCC AAGCG                TGTATCGCCTGTTTG  58 356
C2U40_RS08660 1883712 .. 1883739 + -12.8  -4.70613   ATGACAAAAAGATGT        CAAAAGGGGGCC TTCT GGCCCTTTTTTG         TTTTGTTCCGCTTTT 100 93
C2U40_RS08665 1884754 .. 1884773 +   -15  -5.10461   ATTATGGTTTTTCCA            GCCGACCC CACG GGGTCGGC             TTTTTATTGGCTGCA 100 277
        sixA 1888303 .. 1888313 +  -6.8  -2.79183   TTACGGAATTATTTC                 GCAG AAG CTGC                 TGTCATACGGATACA  53 113
C2U40_RS08680 1888580 .. 1888610 + -13.4  -4.62783   CACCTCGCTGATCCG      C-GTCATGCCCGC CACCGT GCGGGCATGACTG       TTTTTAGGCTCCCTC 100 50
C2U40_RS08685 1889681 .. 1889698 + -12.7  -4.96848   ACGAGTGAGAAAAAA             GACCGCC GAAA GGCGGTC              TTTTTGTCTGCGGGA 100 33
C2U40_RS08695 1892932 .. 1892962 + -22.8  -3.84719   ACCAGCCAACATAAA       CAAAACGGGAGCCA CAG TGGCTCCCGTTTTG       TTTCGCTTTCCGCCT 100 199
C2U40_RS08710 NONE
        lolD 1899094 .. 1899106 +  -6.9  -2.73875   GGTGAGCGGCGTGAT                GGCGG AGG TCGCC                TGATGTTCAAACCGC  53 10
C2U40_RS08720 1900378 .. 1900415 + -16.9  -4.09243   TGTCTGCTGATAAAA   ATGAAGGGCCCGCCGGT GCAA ACCGGCGGGCCCTGCTG    TTTTGGGGGGATCTG 100 53
C2U40_RS08735 1901932 .. 1901942 +  -6.8  -2.52543   GGCAATAAAGGGTCA                 GCAC GCA GTGC                 TGAGTTGAACGAGGT  52 33
C2U40_RS08740 1903311 .. 1903337 + -10.1  -5.07652   GACTGTTAAGTATAA         TGGCTCGTGTG ATCTC CACTCGGGCCA         TTTTATTTTAGGGAC 100 62
        clpP 1904018 .. 1904033 +  -3.3  -2.80816   CCATCGTCGAGGGCA              TCATC TGGTTT GATGA               TGTCCTCAATCGGCA  41 59
        clpX 1905426 .. 1905450 + -14.4  -3.26839   TGATTTTTAATCAAA          TGAAAGGGGC TTTTT GCCCCTTTCA          TGCTTTTTGCGGTTT  95 46
C2U40_RS08755 1908022 .. 1908035 +  -5.9  -2.61602   GCAATGCGTGATGTG               GCGCG GGTT TGCGC                TAGATTGTCACTTGC  50 146
C2U40_RS08760 1908499 .. 1908520 + -13.7  -4.62203   ATACTGATTGACCAA           GGCGCATCG CAAT CGGTGCGCC            TTTTCATTATTTACG 100 110
C2U40_RS08765 1910508 .. 1910526 + -13.1  -4.62441   CAATCCATGTGAAAA             CGGCCCC TTGAT GGGGCCG             TTTCTTTATCTGCGA 100 54
C2U40_RS08795 1918029 .. 1918046 + -11.3  -5.06816   GGGATAAACAAGAAA             TGGCAGC CGAG GCTGCCA              TTTTTGTTGGGGAGT 100 47
C2U40_RS08805 NONE
C2U40_RS08810 1921185 .. 1921202 + -12.7   -4.7254   CGCGCCCAACAAAAA             GGCACCC CGCG GGGTGCC              TTTTTCGTGACAGCT 100 60
        mmsA NONE
C2U40_RS08865 1936312 .. 1936347 + -14.7  -3.85698   GCCGTGCCCAGCCCG    CCCTGACGACGCGGC TGGCGT GACGCGTCGTCAGGC     TTTGTGAGCCAGCCG 100 51
C2U40_RS08870 NONE
C2U40_RS08875 NONE
        mmsB NONE
C2U40_RS08885 1940198 .. 1940223 + -15.5  -5.06816   GCGCTCTTTTGCAGA         TGCCCCTG-GCC CTC GGCGCAGGGGCA         TTTTTATTGAAACGT 100 47
        arcD 1942016 .. 1942037 + -14.5  -5.71712   AACCGGCACAATAAA           GAGATGGCC CAAG GGCCATCTC            TTTTTTTATGTGCAG 100 39
C2U40_RS08895 NONE
         ffs 1943580 .. 1943615 + -12.7  -4.09374   AATCATCACTGCAAA    TGCACAACACTTAGC AGGGGC GCGGAGTGTTGTGCA     TTGTTGTTATCTCTT  95 525
C2U40_RS08940 1954168 .. 1954199 + -16.6  -4.72272   CGAGCCGCAGTACTT      TGACAGGCTCCGCC CACC GGCGGGGCCTGTTG       TTTTTGGTGGGAACG 100 47
C2U40_RS08955 1958480 .. 1958492 +  -4.7  -3.64703   TCCCGCACCACACCC                CCGCC AAA GTCGG                TTTCGATGGCCCCCG  55 243
C2U40_RS08965 1960168 .. 1960184 +  -9.3  -3.05647   GTTACTCTCATCGGC              GGCCGGC ACT GCGGGCC              TCTCTATGGTTGCCA  66 50
C2U40_RS08970 NONE
C2U40_RS08975 1962198 .. 1962221 + -16.8  -3.65812   AGGCTGAATGACAAA          GAGGGAGAGC CTGG GCTCTCCCTC           TTATATTGCGGCCGA 100 47
C2U40_RS08985 1964356 .. 1964379 + -16.8   -4.8543   CCGGATAATGACCAA          GCGCTTCACC CCCG GGTGAAGCGC           TTTTTGTACCGGTTC 100 109
        msbB 1965552 .. 1965567 + -10.4  -5.07486   CGCCTTTATGTCATA              TGGCCC TGCG GGGCCA               TTTTTGTTGGCGATG 100 48
C2U40_RS08995 1966788 .. 1966804 +  -5.8  -3.27475   ACAGGGATAGGCAAG              TGGCCC GGGAG GGGCTA              TCTTCTGATGCGCAA  56 116
C2U40_RS09000 1967725 .. 1967756 + -16.8  -3.33492   GGTGGCCGTAGTCAG      TGAAAAAGAGCGCC TTGT GGCGCTCTTTTTTA       TTGTCGGCTGGCTGG 100 51
C2U40_RS09020 1972969 .. 1972997 + -16.1  -2.66964   GGAAAGGGGAGATGC        AAAAAGCCCGCTC GAG GAGCGGGCTTTTC        TAATCTGGTGCGTCC 100 126
C2U40_RS09060 1976183 .. 1976217 + -13.6  -3.25668   CTCAGGGATTTGCCA     TTGAAAAGGGCCTGCA TCA TGCAGGCCCTTGGCGA     TCTTGTGGGTGGGTT  89 56
C2U40_RS09085 1980502 .. 1980532 + -16.3  -4.11484   CCAGACGTCAGAAAG      C-GACAACGCAGCC CTCG GGCTGCGTTGTCTG       TTTTGGGGCCTTGCG 100 57
C2U40_RS09110 NONE
C2U40_RS09115 1984369 .. 1984383 + -12.8  -4.76644   TGCAGAAAAGAGAAA               GGCGCC GAG GGCGCC               TTTTTCATGCCTGTT 100 48
C2U40_RS09150 NONE
C2U40_RS09155 1989556 .. 1989585 + -19.5  -3.61398   CCAAACGACAGGCAA       TAAAAACGGCGGG AATT CCCGCCGTTTTTA        TTGTTGCCACGCCGA 100 141
C2U40_RS09180 1994646 .. 1994661 + -11.8  -4.74787   AGCTGCAATGAACAA              GGGGCC CGCG GGCCCC               TTTCTTTATCTTTGT 100 44
C2U40_RS09190 1996416 .. 1996437 +  -5.1  -3.76048   GACCCAGGCGGTGGC           GGTCAGATA GAGC TGGCTGACC            TTCTCTTCATTGAGC  58 73
        fadI NONE
        fadJ 2012444 .. 2012473 + -16.5  -4.58395   CAACAGGCCAACCGA       CAAGGAGGCGACC CCGG GGTCGCCTCCTTC        TTTTTGGCGCCTGGA 100 58
C2U40_RS09260 2012871 .. 2012898 + -17.2    -5.055   TTTCGTTCATACCGC        CAAATGCCAGTC TTCG GACTGGCATTTG         TTTTTTGAGCCTTGG 100 49
C2U40_RS09265 NONE
C2U40_RS09270 2014991 .. 2015005 +  -9.2  -3.55622   AGTGCTCAAATCTGT               GGCGGT ATC GCCGCC               TTTCAGAGCGTTAAG  71 523
C2U40_RS09280 2016847 .. 2016863 +    -3  -4.26393   AAAGAATCAAGGTTC             TGAGTGC CTCG GC-CTCA              TTTATCTGTTGTGTC  64 478
C2U40_RS09295 2021012 .. 2021034 +   -12  -3.56325   GGCCCCGCTTGACCG           CGCCGCGA CCGACAA TCGCGGCG           TTATCATTATGAGAA  82 62
C2U40_RS09300 2022653 .. 2022704 +  -3.5  -3.57615   CGCAATTATTGTTAC GGGTTCTCTCCCCGGGGCGCTTT TCACTC GATGATCCCCGGCGAGATGACTC TTTGCGAGGTATTCA  53 87
        dpaL 2023988 .. 2024019 +  -2.8  -2.68806   GCGCGGTAACGGGCA      CAGGGCGCTGCC GACGAACA GGCCGCGCACTC       TCAGTTGTTATGGAG  40 95
C2U40_RS09310 2025267 .. 2025296 + -15.7  -3.14125   ACAAGTAAGGGGGCT       GCCGGGCGGTGAT GGCC ACCACCGTCCGGC        TGTTGCATGTGTGGC 100 33
        hydA 2026856 .. 2026872 +  -7.2  -3.33492   AACAACGAAAGGTGG              GCCGGT ATTGC GCCGGC              TTGTCCCATCACTGG  59 79
        arcC 2027852 .. 2027868 + -15.1  -4.22009   GCAAGCTTGTAACCT              GGGGGCC GTC GGCCCCC              TTTCTGTTGACTGGT 100 47
C2U40_RS09325 2028942 .. 2029000 + -28.4  -2.70022   GGGCTAAGCCGATTG CCGGCAAAGAGATAAAAAGGGCCCGCCA TCA TGGCGGGCCCTTTTTGCTTCTGTGCTGG CTTATCTGCGCTGGG 100 34
        mocA 2032335 .. 2032349 +  -2.8  -4.78572   CATTGTCGAAACTGG               TATCGG CTT TCGATG               TTTTATTAATTGGAG  71 264
C2U40_RS09350 2034791 .. 2034801 +  -6.8  -3.85698   AGCATGCCGTCGTCG                 GGCA ACT TGCC                 TTTCTCACGCAAGGC  65 164
C2U40_RS09375 2042969 .. 2042991 +   -12  -3.66178   CTTGATGGAACTGGA           TCCCGCCC TTTGACC GGGCGGGA           TTTACGCTTGGAAAC  85 445
C2U40_RS09390 2043790 .. 2043808 +  -4.4  -3.36327   ATCGATCACATTCAG             CATGCGGA ACC TCCGCCCG             TTATGGGTGCGGTCC  51 117
C2U40_RS09400 2044965 .. 2045018 +  -3.7  -3.30972   TAGTGACTCGTTTCG GACCTTCAGCATGTCAGCTTCGCGT CCGC ACGATAAGCTGACATGCCCGGGAGC TTCAGTCTTTTCTGG  49 151
C2U40_RS09410 NONE
C2U40_RS09415 2047415 .. 2047426 +  -3.6  -2.72144   GAGTCTGTGTGAAGA                GCGG AATG TCGC                 CTTTCAGCCAAGTCG  43 216
C2U40_RS09420 2048464 .. 2048488 +  -4.2  -3.07522   GCGAAGCGGACGATC         GCCTGTTCGGCC TCC GGCCG--CTGGC         TCTCTTCAAAGATGT  45 490
C2U40_RS09465 NONE
C2U40_RS09470 2055412 .. 2055457 +  -5.3   -2.5806   TCGAGCTGCCAGCCT GACG-ACTTTAAGGCCATCGCC AGC GGCGGTGGCCTGCAGATGCGAC CTTATGAAAGACTTT  47 24
C2U40_RS09475 NONE
C2U40_RS09480 NONE
C2U40_RS09485 NONE
C2U40_RS09490 2058256 .. 2058291 +    -9  -2.79183   GCCCCAGCGCTTCGA    TTCCCAACTGCG-TCCA GAT TGGAGCGCGGTCGGGCA    TGTAGTGGCGATACA  57 118
C2U40_RS09535 NONE
        msrA NONE
C2U40_RS09545 2066799 .. 2066809 +  -2.4  -4.66833   CCTGCCTTGAGTGAC                 CAGC CAG GCGG                 TTTTTCGCGTTCGCA  66 31
C2U40_RS09560 NONE
C2U40_RS09565 2069395 .. 2069414 +    -5  -3.41051   ATGCTCATGTCAGGA            GGGCAA GTCCTCTG TTGCCC             TTATCATGGCCGTGA  51 41
C2U40_RS09580 2072117 .. 2072138 +  -5.9  -2.88544   CGGCGTCAACGTTCG           CC-TGGCTTT GGC GAAGCCACGG           TCTGTCGCGATGAAC  48 52
C2U40_RS09680 NONE
C2U40_RS09685 NONE
C2U40_RS09690 2094922 .. 2094941 +  -7.1  -3.39895   GTCATTGGCGCAGGC            CCGGCCGG TCTCT CCG-CCGG            TTACTTCCTGGCCCG  59 449
C2U40_RS09700 2097740 .. 2097750 +  -4.6  -3.04398   TTTGGACTGGATTGC                 CCGC CCT GTGG                 ATTTTCCCGGCGGCG  48 57
        ygfM NONE
C2U40_RS09710 NONE
C2U40_RS09715 NONE
        guaD 2104404 .. 2104418 +  -4.9  -4.07568   TCAGCTGGTGCACGA               GCGGG GTTGA TCCGC               TTTTCACAGGAGAGG  62 16
C2U40_RS09725 2106319 .. 2106335 +  -5.7  -2.52453   CCCGGTTGGCCCGAC              GTGCCGG AAA CGGGCGC              ATATCTTGCTGTTTT  47 270
C2U40_RS09730 2108693 .. 2108703 +  -2.4  -2.72568   CGAGGGTGCAGGGGA                 GGAG CAA CGCC                 ATGTTTGATATTGCC  39 7
C2U40_RS09735 2109558 .. 2109574 +  -2.1  -2.66316   CACCTGCGCCGTCGA              ACGTGCC GGA GGCAAGA              TCCTATGATGCAACC  38 1
C2U40_RS09740 2110383 .. 2110402 +  -4.9  -5.26316   GGAAAATAGTGGCGA            GGGGTCT GAACAA AGCCCCC             TTTTTTGTCACCTGG  87 344
C2U40_RS09745 2113835 .. 2113850 + -11.8   -4.3587   TTCTCAATATGAAAA              GGGGCC TGCG GGCCCC               TTTCTGTTGTTGGTC  95 48
C2U40_RS09755 2115376 .. 2115392 +  -3.6  -2.53119   ACCAGCCCGGTGGGG              GCCAGG AACAG CATGGC              GTATTGTCCCCAGTT  39 225
C2U40_RS09765 2119048 .. 2119063 + -11.8  -4.45083   AGCCGTAAAACAAAA              CGGGCC TGAT GGCCCG               TTTTGTCGATATGAG 100 50
C2U40_RS09825 2134519 .. 2134534 +  -4.7   -2.8032   AATCAGTCCCGCTTT              TGCCA CACTTT TGGCA               TAATGTTCCCTTTTG  46 47
C2U40_RS09830 2136471 .. 2136490 +  -5.6  -3.38224   TCTTCGAGCAGCAGG            CGCTCGCC GGGC GGTGATCG             TGTTTGCGCTGGCGT  54 9
C2U40_RS09835 NONE
        tsaB 2137311 .. 2137368 +  -3.4  -3.83026   TAAGGGCGGGAGTGG CAGGCATGTCGCTCACGCCGCAG-GG AACATGCC CCATTGCGG-GTGGTTGACAGGCCGG TTTCATCTGGCCAGA  53 38
C2U40_RS09845 2137927 .. 2137941 +  -4.2  -3.23216   CCGGGAGTGAAGACC               GTGCTT CAG GAGCGC               TTCCTGATCCTGGCC  47 43
C2U40_RS09850 2138951 .. 2138962 +  -3.6  -2.82623   GAGGCAACACAGTGA                GCGC ACAG GTGC                 TAGTTATGCAGGAGA  43 192
C2U40_RS09855 2140702 .. 2140719 + -12.7  -5.79595   CGTCGTTATGCAAAA             CCGTGGG TCAG CCCACGG              TTTTTTCTTTTGGCC 100 68
         rnd 2141886 .. 2141898 + -10.5  -5.61596   ACAAGATAAAAAAAG                GGGCC ATC GGCCC                TTTTTTTGTCGGCGT 100 43
C2U40_RS09880 NONE
C2U40_RS09885 2145503 .. 2145524 + -13.7  -3.66178   TTGCCTGCGTCCAGA           CCGGTGCCC GTAC GGGCATCGG            TTTGAAATTCAAGCG 100 78
C2U40_RS09890 2148172 .. 2148188 +  -7.2  -2.71712   GGGTAAACCCACGGC              CCGGCG CTGGA TGCCGG              ATTTCAAGACGAGAG  53 102
C2U40_RS09895 2148601 .. 2148630 + -20.9  -5.63504   AGCGTGACCAGATGA       CACCGCGGATACA GAGA TGTATCCGCGGTG        TTTTTTTATCCGGTT 100 86
C2U40_RS09905 2152569 .. 2152586 + -12.7  -2.71364   TAGTGCCCGGCTCGC             GCCTCCC GGCC GGGAGGC              TGGTTGGGGGAATGC  77 74
C2U40_RS09910 2153061 .. 2153081 + -12.6  -4.36554   CTGTTGTCATCCAAA            GAGCAGGC ATCTG GCCTGCTC            TTTCTTATGGTGATG 100 59
C2U40_RS09915 NONE
C2U40_RS09920 2158112 .. 2158138 +  -2.9  -4.10161   TCTCTTGTCACTGTT        CG-GGGCCCGTG ATAG TATGCGCCCTCG         TTTTGCGAGGTGCTG  58 43
C2U40_RS09925 2158508 .. 2158539 + -19.6  -4.61527   CAGCGAACGTTCCAG      TAAAGAGGCCACCC AAAC GGGTGGCCTCTTTG       TTTTTACAGCATTTT 100 45
C2U40_RS09930 NONE
C2U40_RS09935 2163252 .. 2163279 +  -3.2  -4.37092   CAGAACGCATCCTCT        TTGTGGGGGCCG GTGA TGGCCACCCCGG         TTTTCTCCCGCAACT  64 415
C2U40_RS09960 2168526 .. 2168544 +  -8.8  -4.77157   GGCCGCATAAAAAAA             GCCCGC TTTGATC GCGGGC             TTTTTGATGGCTTGC  93 413
C2U40_RS09980 2173065 .. 2173085 +   -14   -3.6682   AACAGCCATGAAAAA            CGGGAGCC ACACA GGCTCCCG            TTTGCATCGATGGCA 100 61
C2U40_RS09995 2177285 .. 2177303 + -12.4  -5.39721   CTGGGGTGGATTTGA             GGGTGGGC ATG GCTCACCC             TTTTTTATATAATGG 100 56
C2U40_RS10000 2178019 .. 2178035 + -11.5  -5.08824   GTTGAGAGATATCAA              GCCGGGT GAT GCCCGGC              TTTTTTAAATGAACA 100 36
C2U40_RS10005 2178695 .. 2178711 + -15.1  -3.43564   CAATGTGTTAAAAGA              GGGCGCC GAT GGCGCCC              TTCTCCATTCACTTG 100 67
C2U40_RS10010 2180559 .. 2180573 +  -8.5  -5.10029   AAGCATGTTGAGAAA               GGGCC CTTGC GGCCC               TTTTTTCAGGTTCAT  93 54
C2U40_RS10025 NONE
C2U40_RS10030 2187810 .. 2187827 + -12.7  -4.72272   TGAGTAAACGAAAAA             CGGGAGC CTTG GCTCCCG              TTTTTCATGGCCGGC 100 58
C2U40_RS10040 NONE
C2U40_RS10045 NONE
C2U40_RS10050 2191620 .. 2191637 + -11.3  -2.76265   GCGCAAATGCGGCCA             GGATCCG GTGT CGGATCC              GTTGGTTTATGGCAT  73 123
C2U40_RS10055 2192278 .. 2192289 +    -3  -2.65279   GCAGTTCTTGAAGAG                CTTA AACG TAAG                 TGAATTTAGGAGTTA  40 11
C2U40_RS10060 2192467 .. 2192487 +  -3.3  -4.03234   CTACCGCGGTAAAAA            GGTAATC GCTTAAG GATTGCC            TTTGTCTACGCAAAC  58 13
C2U40_RS10065 NONE
C2U40_RS10070 2194473 .. 2194517 +  -5.7   -5.1764   GCGCTGGTTCGCCTC TGATCGTCGTCGGGATGAGC AGTTTG GCTCATCCTGCCG-CTCTCA TTTTTGTCTTATCTA  88 23
        fabD NONE
        fabG 2196265 .. 2196283 +  -5.2   -3.8901   TCAAATTTGCGATAG             TACGCCGA AGT TTGGCGAA             TTTCGTGGTTTGACC  63 62
C2U40_RS10085 2196633 .. 2196664 + -18.2  -3.40843   AATAAGTTCCTGTTC      TGAAAGAAGCGGCC CAAG GGCCGCTTCTTTTA       TGTTTACCCCTTTTA 100 36
        fabF 2197947 .. 2197961 +  -7.8  -2.62263   TTCAAACGCGTATAA               TTCGCC TTG GGCGGA               TAGTATGGGCCCGAT  56 26
        pabC 2198836 .. 2198875 + -12.8  -2.94912   TCGGCTTTACACCCT  GCTCGCGGGCGCGGC-ACT GAC AGTCGCCGTGGCCGGGGGC  TATGTACATTACAAA  78 41
        mltG NONE
C2U40_RS10105 NONE
        holB NONE
C2U40_RS10115 2202193 .. 2202211 + -17.4   -4.3467   AGCGATAACAAACAA             CGCCCCGC ATA GCGGGGCG             TTTTACTATGACAAT 100 33
C2U40_RS10120 2203528 .. 2203539 +    -3   -3.1332   GCTAACCGCGTCACT                CATA TTTT TATG                 TTAAATGATATCTTG  45 41
C2U40_RS10125 2204020 .. 2204051 +  -9.4  -4.07687   AGCATAAAAAAAGGT      TCATCGCGGCTTTC CGGG GAAGGCCGCCTTGA       TTTTCAGAAAAAAGT  81 84
C2U40_RS10155 NONE
C2U40_RS10160 2213123 .. 2213159 +  -6.4  -3.74519   CGACCCCGGCAGCAC   CGGGGTCGATGCGCGCC AGCG GGCGGGCAG-GGCGCCG    TTTCATCACCCTGTT  63 74
        prpD 2214685 .. 2214702 + -14.1  -4.04318   TGCCATAAACAAAAA             GCGGGCC ACTC GGCCCGC              TTTGTCATGTCTGCC 100 61
C2U40_RS10175 2216177 .. 2216195 +    -6  -2.72028   TTTGTTTTATTTTAA             GAGGCA TGAAAAT TGCCTC             CATTTTTGTCATGAA  51 148
C2U40_RS10180 2217816 .. 2217839 + -16.8  -3.90291   AGGTTTGAAAGACAA          GAGGCCAACC CGGG GGTTGGCCTC           TTTCATTGCGGCAAT 100 80
C2U40_RS10205 2223462 .. 2223491 + -16.6  -2.74144   TGAGGTAGCAAAAAC       GAAAAGGGCCTG CGCAAT CAGGCCCTTTTC        ATTTGCGGCTGCGGG 100 58
C2U40_RS10215 2225022 .. 2225052 +  -6.8  -3.90588   AGCATCAGCTGTTGA       TGGTGATGCTGTTC GCT GTACAGCATCGACG       TTTCATTCCAGCGTG  68 184
C2U40_RS10220 2226526 .. 2226541 +  -4.8  -3.20432   TAACCCAACACCGCG              CATAAT GTAT ATTATG               TTAAATTAACTATCT  49 132
C2U40_RS10225 2228634 .. 2228649 +  -4.6  -2.52543   GATCGGAGTTGTTTA              GCGAAC AACT GTACGC               TAAATTGGCCCGGCT  44 51
C2U40_RS10230 2229280 .. 2229306 + -15.2  -4.14739   GTCGAACTGAACAAC         GTAAAGGGGCCA TCA TGGCCCCTTTCC         TTTTGCAATGAGTGA 100 55
        ccoN NONE
        ccoO NONE
C2U40_RS10315 NONE
        ccoP 2253639 .. 2253668 + -18.1  -3.83921   CACGTGATTACTCAG       CAAAAAGCCTCGA CTCT TCGAGGCTTTTTG        TTATCTTGTGTTGAC 100 52
C2U40_RS10325 2254241 .. 2254273 +  -4.1  -3.85817   AGCCGTCCTGTTCAC     CA-TGACACGCCGG CAGTGA CCGGCGCTTCACTG      TTTCTGCCGACAGGT  58 47
C2U40_RS10330 2256817 .. 2256831 +  -4.2  -3.76224   TGGTGTACCATGACC               CCTTTC ATT GCAAGG               TTTGCTGCATGAACA  56 131
        ccoS NONE
C2U40_RS10340 2257685 .. 2257695 +  -3.2  -4.09243   ATACCCTCTGGATCG                 GGAT TGC GTCC                 TTTTGAAACCCTATC  58 9
C2U40_RS10345 2258623 .. 2258636 +  -3.1  -4.56597   TAATGGCTAAAGGTC               TGCCA TCAT TGGTA                TTTTTGCCAAGGAGG  65 123
C2U40_RS10350 2259639 .. 2259649 +    -4  -4.84017   GGGACATGGCTATAA                 TAAG CCG CTTA                 TTTTTGTCCCGGGTT  73 60
C2U40_RS10355 2260596 .. 2260624 + -14.7  -3.49419   GCCCACCTCAGCCAC        AAAAAAGGAGCGC CTG GCGCTCCTTTTTC        ATTTTTATGCCGGCC 100 41
C2U40_RS10370 2263049 .. 2263075 + -11.6  -4.60924   CTAGTTCGCTCGTTG         CGGGTGCCAG TGCTCTT CTGGCACCTG         TTTTTCCCCGCTTTC 100 37
C2U40_RS10375 2263644 .. 2263656 +  -6.9  -4.27316   CAACCTCATTCTCTG                CGCCG GCG TGGCG                TTTTAAATTCCCAAG  72 7
C2U40_RS10380 NONE
C2U40_RS10385 NONE
C2U40_RS10390 2267079 .. 2267098 +   -15  -4.18762   AGCAAGTAAGTTGAC            GGGGGAGG TTCG CCTCCCCC             TTTTCACTCAAGGTT 100 32
C2U40_RS10395 NONE
C2U40_RS10400 2269130 .. 2269162 + -10.6  -4.61199   TTCACCTGCAATAAA     AGC-GCAAGGCGACC CTGG GGTCGCCTTGCTGTG      TTTTGTCTCTGGCCT 100 43
C2U40_RS10475 2287782 .. 2287801 +   -15  -3.83998   GCGAGCCAATGAAAA            GAGCGGCC ATGT GGCCGCTC             TTTGGTATCGGGTAA 100 479
C2U40_RS10485 NONE
C2U40_RS10490 2292313 .. 2292336 + -10.3  -4.17089   CCTTGCCAGTACCAA          TGGGGGATC CCCAGC GATCCCCCG           TTTTGGCGGTTTGAC  85 160
C2U40_RS10495 2295031 .. 2295055 + -18.6  -2.86011   AAGATCTGATGAACC          GGGCGGGAGC ATGAA GCTCCCGCCC          TCCTGTTTCCCCTTA 100 32
C2U40_RS10500 NONE
C2U40_RS10505 2296574 .. 2296595 + -17.3  -5.09895   GTCAGCAAACAAAAA           GCCGCCGGA TTGC TCCGGCGGC            TTTTTTACATCCATC 100 58
C2U40_RS10515 2298199 .. 2298223 +  -9.9  -2.51313   GCCGCCGGAGCAACC          GGGCTGGGATT TTT AAACCCCGCCC          CTCTCTTATCCCTCT  65 10
C2U40_RS10550 2305060 .. 2305099 + -10.7   -3.6215   ACCCTGGTGGTGCGC  CAAT-CTTGCGGCAGCCC CTAGC GGGCCGCCGCAAGCGCTG  TTTCAAGTGGCTTGC  81 5
C2U40_RS10575 2310975 .. 2311006 + -23.1  -5.02074   ATCCTCTCTGCATCA      CGCGCCGCTGCGA CCTGGT TCGCAGCGGCGCG       TTTTTTCACCAGTCA 100 40
C2U40_RS10580 2312503 .. 2312527 + -21.5   -4.9792   AGCAAAAAAGCAAAA          GCCCCGCCAAC CCA GTTGGCGGGGC          TTTTTCTATACCATC 100 68
C2U40_RS10585 NONE
C2U40_RS10590 2313860 .. 2313880 + -18.3  -4.65895   CCCGGATATAGAAAA            GCCCCGCCA GAT TGGCGGGGC            TTTTTACATCAACCG 100 70
C2U40_RS10600 2316489 .. 2316506 + -12.7  -4.27259   AATACCCATGAAAAA             GGCGACC CGGA GGTCGCC              TTTTGACTGTGTCTG  95 53
C2U40_RS10615 2319240 .. 2319259 + -10.7  -5.60993   GCAGCATAAAAAAAA            CCACCGC GACCTG GCGGTGG             TTTTTTTATGGGCGC 100 77
C2U40_RS10625 2321473 .. 2321497 +  -9.9  -3.14881   GCGCCAGTTCCGCCA          GTCCCTGCCCG ACC CGGGCAATGAC          TTCGTCCAGCGATTC  64 285
C2U40_RS10655 2327113 .. 2327128 + -11.8  -5.64274   GCCCTGCTAGCAAGA              GCGCCC CACG GGGCGC               TTTTTTTGTGCCTGC 100 50
C2U40_RS10660 2327459 .. 2327472 +  -9.5  -5.60993   GGCAGCATAAAAAAA               CCGCC TGAT GGCGG                TTTTTTTATGGCGAC 100 46
C2U40_RS10670 2329081 .. 2329094 +  -9.5  -5.35354   ACATAAAGTAAAAAA               CCGCC AGCC GGCGG                TTTTTTCATTGTCTG 100 69
C2U40_RS10680 NONE
C2U40_RS10745 2343821 .. 2343835 +  -2.8  -3.31269   GCCGGGTCAGCTATC               TTGGGC TCG GTTCAA               TTCATATAATGTCGC  47 103
C2U40_RS10750 2344674 .. 2344716 +  -9.3  -2.79183   GCCCCCTCCTGCATA TCGCTTTTCCTATGGCA-GC CGCC GCATCCCATAGGAAAGCCGA TATAGTAAAAGTGGC  63 65
        pfkA 2345782 .. 2345798 + -13.7   -4.8622   GTTGATGTGACAAAA              GCCCTCC ACT GGAGGGC              TTTTTCATTGGGCGC 100 54
C2U40_RS10760 2348193 .. 2348216 + -16.8  -5.41746   GCAGCCGGATACAAA          CAAGGCAGCC CGCG GGCTGCCTTG           TTTTTTTCACCCCTT 100 44
        glgX 2354182 .. 2354207 + -21.9  -4.72272   TGCGGCCAGCAAAAA         GCCCACCCCGG GCAA CCGGGGTGGGC          TTTTTCATGACGCCA 100 49
C2U40_RS10835 2359047 .. 2359080 +  -3.7  -3.13403   CGTCAGCCCCTAAGG     TAACGCCTTCCTACG CAGA TGACGGGAGGCGATA      TGTTACTGGAAGGGC  47 50
C2U40_RS10840 2359946 .. 2359982 + -27.5  -3.02144   CTGAGCGCCACAACA    CTAAGGGGGCCCGATCT TGC GGATCGGGCCCCCTTAG    TGTTGACAGCCGTGA 100 37
C2U40_RS10855 2362374 .. 2362393 +   -15  -3.27774   ACCGCAACAACGACA            GAGGGGCC CGCG GGCCCCTC             TTCATCATTCCGCTC 100 49
C2U40_RS10875 2365027 .. 2365053 +   -10  -3.06696   GGACAACGCGACACG         GCTGCTGCGTGC AGG GCGCGCATCTGC         TATATTACGCCCCCG  69 61
C2U40_RS10880 2366569 .. 2366582 +  -9.5  -5.14563   GTCATAAACAAAAAA               CCGCC CGAG GGCGG                TTTTTTACTGGGCCG  95 58
C2U40_RS10905 NONE
C2U40_RS10910 2370320 .. 2370378 + -11.4  -2.60075   CGAGTCTAGCCAGTC ATCCTGCCGCCGGTCCCGTTGGCGGCAG GCG CCGCGGCAGACCGGGCCGGTGGCGTGAA CTTCGTTGACAAGGA  73 115
C2U40_RS10915 NONE
C2U40_RS10920 2372322 .. 2372354 + -19.2  -3.05463   AAGCCGTGATCACAG      CGACAAGGCCGGCC CCTGC GGCCGGCCTTGTCA      TTCCCTGCCCGACCT 100 55
C2U40_RS10925 2372776 .. 2372793 +  -5.5  -3.12351   GACCAAGATGACGGC             TGAGGCG ACAT TGCCTCG              TTCGGTGTACAACCA  50 60
C2U40_RS10950 NONE
C2U40_RS10955 NONE
C2U40_RS10960 2378698 .. 2378729 + -20.2  -2.85351   GTTTGCCCCATGATC      TCAGTCAGCCCGGC AACA GCCGGGCTGACTGC       TATGGTGTGCGCCCC 100 46
C2U40_RS10965 2379115 .. 2379130 + -11.8  -3.93038   ACCTCGCTTGAATAA              GGGCGC CGAC GCGCCC               TTTGGTATTCAGCTG  90 40
C2U40_RS10995 2386904 .. 2386933 +  -2.2  -4.60648   CAGCTTCATCTAGGC       CACAAATGATAC CAATAT GTTTAATTTGTG        TTTATTTAATGTTTT  66 28
C2U40_RS11000 2388473 .. 2388488 + -11.8  -5.12971   TTCCGAGTACCAAGA              GGCCCC TGAC GGGGCC               TTTTTATTGCCTCTT 100 43
C2U40_RS11020 2392729 .. 2392752 + -16.8  -2.81966   ACGCTGGCCAAAAGA          GAAGGCGACC CTGG GGTCGCCTTC           GTTCTGTCTGTTATG 100 265
        pabB NONE
C2U40_RS11035 2396601 .. 2396618 +  -2.7  -4.11484   CAACTTGCCATATAA             CATTTTG CCTA CAAAACG              TTTTGCAACATTCGC  58 26
C2U40_RS11040 2398137 .. 2398160 + -18.2  -5.31275   CCATACTAGCAACAA          TGCCAGCCGG GTAA CCGGCTGGCA           TTTTTTATGATGCCA 100 48
C2U40_RS11050 2402378 .. 2402388 +  -5.4  -3.67792   AACATTTATTTTTTA                 TGTC TTT GACA                 TTTACCTCACTATCG  58 362
C2U40_RS11055 NONE
C2U40_RS11060 NONE
C2U40_RS11065 2407379 .. 2407394 + -11.8  -5.10461   TCCACCATAAAAAAA              CGCGCC ATTT GGCGCG               TTTTTCTTGCATCAG 100 52
C2U40_RS11075 2410053 .. 2410068 + -11.8  -4.19735   GCATTGATACCATGA              GGGCCC ATGC GGGCCC               TTTCCTTTTGGCCCC  93 34
C2U40_RS11080 2410674 .. 2410696 + -17.8  -5.43487   AGCAGTACAAAAAAA           GAAGGGAGCC ACT GGCTCCCTTC           TTTTTTATGTCATTT 100 48
C2U40_RS11100 2414345 .. 2414365 +  -7.5  -4.65895   CCTAGGCTGGCAGGC            CATTGCCAG CGA CGGGCGATG            TTTTTCCCTGACGAC  83 331
C2U40_RS11110 2416535 .. 2416555 + -14.7  -4.45544   AGTACACCAACTCAA            GGGGAGCCG TTA TGGCTCCCC            TTTTCGTTCATGCCG 100 60
C2U40_RS11115 2418261 .. 2418293 + -19.1   -3.6543   AGCCAGCCCTTCATC      CGCGCGGCTCCCCGT CAG ACGGGGAGCCTCCCG      TCTTTTCAACCGTTG 100 40
C2U40_RS11120 NONE
C2U40_RS11125 NONE
C2U40_RS11130 2421513 .. 2421530 + -12.7  -5.06414   TCCCACGCAGCAAAA             GAGCGCC GAAA GGCGCTC              TTTTTATTGGCAAGA 100 50
C2U40_RS11155 2427426 .. 2427457 +   -18  -3.17763   CGCCGTGACTCGTGT      CGACAGAGGGGGCC CAGC GGCCCCCTCTGCTG       TTGCTGGAGTGTGAC 100 42
C2U40_RS11160 NONE
C2U40_RS11165 NONE
        glpC 2431874 .. 2431893 +   -15  -3.73914   CTCTAGGTAGAAAAA            GAGCCGGC AAAT GCCGGCTC             TTATTACTGGATCAT 100 93
        nrfA NONE
C2U40_RS11180 2434506 .. 2434516 +  -2.4  -2.62983   ACCTCGGGCAAGGAG                 GCAC AAT GAGC                 TGCTCTCGCCGTCAC  38 17
C2U40_RS11185 NONE
        nrfD 2436171 .. 2436198 +   -17  -4.21438   ACGGTATGATCACCA        GCGCCAGCCACC CTCG GGTGACTGGCGC         TTGTTTGTTGCGATG 100 40
C2U40_RS11195 2438258 .. 2438273 +  -2.5  -2.57211   CCGCTCCCTACCCTC              GGCTC GAACAG GAGTC               CTTATGAACGCCCGT  38 3
C2U40_RS11200 NONE
        nrfF 2440029 .. 2440049 +  -4.6  -2.64155   AGACGGCACGAATAA            TGGGGGGC TGACC GCCTCCTG            TCACTTTGGCCCGCC  45 15
C2U40_RS11210 2440821 .. 2440835 +    -7  -2.52896   CAGGGGGCACCGCCA               GCCGCG CGC CGCGAC               TAGGTTCCCCACTCC  52 227
C2U40_RS11215 2441964 .. 2441997 + -16.1  -3.66028   CGGCCATCCTCGTCA     AAAAAGCCCCCGCAT CCAG GTGCGGGGGCTTTTG      TTGTTGAGCCTTGTG 100 47
C2U40_RS11225 2444056 .. 2444066 +  -2.4  -2.79183   CAGCCGTCAACATAA                 CGGG GAG CCAG                 TCTGATGGAGCTGCG  39 10
C2U40_RS11230 NONE
C2U40_RS11235 2447032 .. 2447054 + -17.8  -5.40072   CCGTTTCATCCCAAA           GAGGGAGTGC CTG GCACTCCCTC           TTTTTTTGACCCCAG 100 61
C2U40_RS11245 2449924 .. 2449939 + -11.8  -5.26316   CGCTGACAACAAAAA              GGCCCC GCAA GGGGCC               TTTTTTATGGACTGG 100 48
C2U40_RS11255 2452502 .. 2452525 + -16.8  -2.66452   AAGCGCACAAAAAAA          GAGGGAAGGC TTGC GCCTTCCCTC           GTTCGTTATGCCCGT 100 49
C2U40_RS11265 2456045 .. 2456060 + -11.8  -3.40403   AAGGCGCAGTAAAAA              GCCGCC TTGG GGCGGC               TTGTCATCACGCAGG  80 136
C2U40_RS11285 2461266 .. 2461289 + -18.2  -5.14563   GGCATTGCATCGACA          GAGGGCAGCC CGCG GGCTGCCCTC           TTTTTTGATCCGGCC 100 60
C2U40_RS11295 2463025 .. 2463042 + -12.7  -4.73448   CGTCCGTCACACAAA             GGGAGGC ATCA GCCTCCC              TTTTTGCATCTCTGT 100 71
C2U40_RS11300 NONE
C2U40_RS11305 2465793 .. 2465821 + -26.1   -4.4078   TTGAGCGCAAAAAAA        CAGCCCGCCCCCT GCC AGGGGGCGGGCTG        TTTTGCTTGCGGCCG 100 53
C2U40_RS11320 2471054 .. 2471069 + -11.8  -5.08824   GAATGGAGAGCAAAA              CGGGGC ATGA GCCCCG               TTTTTTGCCTGCCAA 100 60
C2U40_RS11325 2472924 .. 2472940 + -10.8  -4.63479   GTGGTAGTATGTGAA              GGGGCC CTGAT GGCCCC              TTTTGCTTTATGGTC 100 42
        focA NONE
        pflB 2476486 .. 2476503 + -14.1  -5.64274   CTCGGTGAACAAAAA             CCGGCGC CAAG GCGCCGG              TTTTTTTATGCCTGA 100 47
        phnR NONE
C2U40_RS11360 2482153 .. 2482178 + -17.7  -5.46698   CAATAAACTGCCAGT         CGAAGGCCAAC AGGT GTTGGCCTTCG          TTTTTTGGTTTTAAC 100 81
C2U40_RS11365 NONE
C2U40_RS11370 NONE
C2U40_RS11375 2486666 .. 2486708 + -11.3  -3.15544   GGAAAAAGCCAAAAA GC-CGAAGGGGCAGGAGAGT GATG ACTCCCCTACCCCTTCGCGG TTGGTACGGCTCGCG  77 59
        gltA 2499709 .. 2499737 + -14.7  -3.59738   TCTCGGATTTTTTGT        TACAAAGGCGGTC ATT GACCGCCTTTTTA        TTTGCCGCTCTAATG 100 49
C2U40_RS11430 2500161 .. 2500192 +  -3.1  -4.07687   GACCCGGTTCTGGTA      CGCTGGTT-GACGA ATCCA TTGTTTAATCAGCG      TTTTCGGGCAGCCAT  58 80
C2U40_RS11435 2500732 .. 2500747 + -11.8  -5.44721   TCACCCAATGAAAAA              GGCGCC TTGC GGCGCC               TTTTTTTCGACTCAT 100 44
C2U40_RS11445 2504129 .. 2504148 +   -15  -5.10461   GCGCAACAACAAAAA            GGGCTCCC CGAC GGGAGCCC             TTTTTGTTCGCTCAA 100 61
C2U40_RS11455 2506511 .. 2506535 + -18.6  -2.87132   CTCTATCTCGCGCTA          CCAGCCCGGC CTGCC GCCGGGCTGG          TATCTCCCCCCGCCA 100 73
C2U40_RS11460 2508252 .. 2508291 + -16.4  -3.61219   GCCGTCTACCCGATG  ATGACCTGGCGGACCACT TGGC GGTGGCCCGCCAGGTCGC   TTTAGCCGGTTTTGT 100 25
C2U40_RS11465 2510110 .. 2510135 + -13.3   -4.4078   CTCCTTGACCGAACA         GAGCCGTCATC CCGC GATGACGGCCC          TTTTCATTGCGCCAA 100 44
C2U40_RS11470 NONE
C2U40_RS11475 2511650 .. 2511666 + -13.7   -5.4505   ACCAGCCACAAAAAA              CGCAGCC TTG GGCTGCG              TTTTTTGTTCGGCAA 100 96
C2U40_RS11485 NONE
C2U40_RS11490 2512630 .. 2512653 + -16.8  -2.71325   GCAGCCTCATAAAAA          CAAGGCCCTC ATGG GAGGGCCTTG           TCCATTTATCACTCC 100 44
C2U40_RS11500 2514989 .. 2515005 +    -8  -3.14211   TCGATGGCGGGATAG              GCATCC AGGGA GGATGC              TTCGTAGCAGCGAAT  56 457
C2U40_RS11525 NONE
        araD NONE
C2U40_RS11535 NONE
C2U40_RS11540 2525238 .. 2525262 +  -4.2  -3.09015   CACTACCTCGAAAAT          CTGTGAGATG TGACC CGCCTCACGG          TTAAATGACTGTACG  46 20
C2U40_RS11545 2526317 .. 2526331 +  -7.1  -2.52896   TGGAAGCGGTACTCG               GCAGG GCTCG CCTGC               TGGCTTGGCAGATCC  48 438
C2U40_RS11555 NONE
C2U40_RS11560 2528928 .. 2528945 +    -7  -2.71712   CTGCGGGCCCGCCGA             TGTGCG ACCTGC CGCACA              ATTTGCACAAGACAA  53 68
C2U40_RS11565 2529972 .. 2530002 + -24.2  -3.80573   TGCCGTTGCCTGAAA       CAACAAGGGGAGCC AGT GGCTCCCCTTGTTG       TTTCGTGGTGGTCAG 100 43
C2U40_RS11585 2534168 .. 2534185 + -12.7  -5.71712   GCGAGCCACAAAAAA             GAGCGCC ATCA GGCGCTC              TTTTTTTATCTACAC 100 43
        pspF 2545095 .. 2545116 + -11.6  -2.55351   AGCGGCACCCACCCC           TTGCCGGC CCCGTC GCCGGCAA            CTTCGTATAAAAACA  73 63
C2U40_RS11655 NONE
C2U40_RS11660 NONE
C2U40_RS11665 NONE
C2U40_RS11670 2549655 .. 2549665 +  -6.8  -3.28712   CCCGTATCAGAGCGT                 GGCA GCA TGCC                 TTCTCACCAAGGAGC  59 48
C2U40_RS11675 2550481 .. 2550500 +  -4.8  -2.73124   GCCGCTGATCCGCGC            CCGCCGGC TCTT GCCCGCCG             CTTTCACGCCTGAAA  46 33
C2U40_RS11700 2555453 .. 2555481 + -12.5  -3.28712   GCCGATCCAGCTCAT        GCAGATAGTCGAG CTT CTGGGCTATCTGC        TTCTCCAGCCCACGC  74 132
C2U40_RS11725 2561624 .. 2561659 +  -3.8   -4.2243   CTTATCAAGGCGCGC    CACGCCCGGTTGAAGA GCCT TCCGCGACAGGGCATG     TTTTCAGATCTTTCT  62 467
        trxB 2562758 .. 2562789 +  -9.4  -4.07687   AGGGATATAAAAGGT      TCATCGCGGCTTTC CGGG GAAGGCCGCCTTGA       TTTTCAGAAAAAAGT  81 46
C2U40_RS11740 2565390 .. 2565422 + -10.7   -2.5955   TCCGTGTAGTACCCG     CCCGACA-GCTTGCC CAGCC GGCA-GCGTGTCGGG     TCACTTCTCCCCCCT  69 61
C2U40_RS11750 NONE
C2U40_RS11755 2567408 .. 2567424 +  -3.7  -2.59431   AAATCCGGCATGATC              CAGCAGA TTT TTTGTTG              TGGCTTATCAAGAGG  43 58
C2U40_RS11760 2567674 .. 2567713 + -18.8  -4.07568   GCTAAGCCAGGAATT  CAGCAAAAAACCCCAACC TTCC GGTTGGGGTTTTTTGTGG   TTTTCCAACAGCGCC 100 36
        cspD 2570835 .. 2570857 +  -9.9  -5.84381   GGATAAATAAAAAAA          CCGGCAAGCC GCAA GG-TTGCCGG           TTTTTTTATTGCTGC 100 51
C2U40_RS11785 NONE
C2U40_RS11790 2572171 .. 2572210 +  -5.9  -2.81922   ATCCTGCAGGGCGCG  CCATTGATGACATGCATT TCTCC GATGCACG-CATTAATGG  ATATTTTCAGTGGTG  51 23
C2U40_RS11795 2572746 .. 2572757 +    -3  -3.93556   CTTACATTGGATTGA                TAGA TATC TCTA                 TTTCATTGACTACCT  55 473
C2U40_RS11940 2614580 .. 2614596 + -13.7   -4.9792   GCCAGCAACAAAAAA              GGCGCCA AAT TGGCGCC              TTTTTCTATCCACTC 100 44
C2U40_RS11955 2617879 .. 2617913 + -21.8  -2.89881   AAAGCCGTATCGGCG     CAATAAAAAACCTCGC ATC GCGAGGTTTTTTATTG     TCTGTAGCCTGACTA 100 42
        rrtA 2621395 .. 2621418 + -15.3  -3.56558   CCGTACATGATGCAA          TGCCGGCCC CACATC GGGCCGGCA           TTCTGTCCATTATCG 100 42
        ribA 2627547 .. 2627587 + -19.9  -2.85351   GCCTCGCCGCTAGCC  GCCATGAAAAACGCCTCCC ATC GGGAGGCGTTTTTTGTTGC  TCTCATATCGCCGCG 100 45
C2U40_RS12035 2630851 .. 2630872 +  -8.6  -2.78816   ATCTCTGATATAAGA           CGAGGCCG GTCAAG CGGCCCCG            TCTCATCAAGCATGG  60 45
C2U40_RS12060 2636021 .. 2636031 +  -2.4  -3.65522   ATTGAGCTTGCCAAG                 GCGG TCG CCTC                 TTCTTAAGGTCACTG  49 48
C2U40_RS12065 NONE
C2U40_RS12070 NONE
C2U40_RS12075 2638560 .. 2638589 + -19.5  -3.06831   TTTCTTCTCAAAAAA       TAAAACAGGGCGC CTTG GCGCCCTGTTTTA        TTGAGTGAACCTTAA 100 58
C2U40_RS12095 2641945 .. 2641967 + -14.9   -4.3208   CGCCAGAAACAAAAA           CGGCATGGG GGAAA CCCATGCCG           TTTTGCGTTATCGAG 100 54
C2U40_RS12110 2643962 .. 2643991 +  -2.8  -3.58905   GCCCGCCCGTTGTGG       CGGTTGACCACA AGCTGG TATGGTGAGCCG        TTATCTGTAAAAAAT  51 19
C2U40_RS12115 NONE
C2U40_RS12120 NONE
C2U40_RS12125 2645983 .. 2646001 +  -7.4  -2.79273   CTCCCCAAGCCCTGA             GCGGGTTT AAA AAACCGGC             ATTCTGTTCAAGGGA  57 26
C2U40_RS12130 2646211 .. 2646258 + -13.6  -4.14243   GAATCCCTCCCTCAC CGCCAAATTTAAAAAACCGACC TGAT GGTCGGTTTTTTGCTTTTGGGG TTTTCAGATGCGATA 100 21
C2U40_RS12135 NONE
C2U40_RS12140 2648281 .. 2648308 + -16.4  -2.77005   CCTCAAACCCTGATC        GAGCAGACCCCGC CTG GCGGGGTCT-CTC        CTTTCACGATTAGTT 100 28
C2U40_RS12145 NONE
C2U40_RS12150 NONE
C2U40_RS12155 2651446 .. 2651461 +  -3.2  -3.01712   TTATGTCGGATGTGG              ACCGTT GAGT AACGGC               TGTTACCAAGACCCG  43 18
C2U40_RS12160 NONE
C2U40_RS12165 NONE
C2U40_RS12170 2656222 .. 2656235 +  -2.3  -2.95774   AACCTGCAGGAGGCC               ATCGC ATGA GCGAC                TCTCTGATCGATCTG  41 17
C2U40_RS12175 2657247 .. 2657289 +  -8.3  -2.83715   CTGGAACGTCTGCTT GCCCG-CCGCCCTGCATCCC GCTC GGGATGCAGCAGGTACGGGC TGTGGTGCTGATGAA  60 77
C2U40_RS12180 NONE
C2U40_RS12185 NONE
C2U40_RS12190 NONE
C2U40_RS12195 NONE
C2U40_RS12200 NONE
C2U40_RS12205 2663721 .. 2663737 + -10.8  -5.71712   ACTCCATCTCAAAAA              CCGGCC CAAGT GGCCGG              TTTTTTTATCTGCCC 100 45
C2U40_RS12210 NONE
C2U40_RS12215 NONE
C2U40_RS12220 2668016 .. 2668032 + -10.8  -5.64421   GCCGCCATAAAAAAA              CCGGCC ACAGG GGCCGG              TTTTTTGTTTGCGAT 100 48
C2U40_RS12230 2673930 .. 2673945 + -11.8  -5.26316   AACACGCAGCATAAA              CCCGGC AATC GCCGGG               TTTTTTATCGCCTCA 100 356
C2U40_RS12245 2675616 .. 2675670 +  -2.8  -5.08601   TGAACCTTATTTCTT GGCTTTGGCCTTGAG-CAGGCGCTT GCGTTG ACGCTCCTGGCTCAGGGTCAGGGTA TTTTTCTTGCCCTCG  77 38
C2U40_RS12345 2695256 .. 2695270 +   -10  -2.60615   CAGAAATTCAAAGTC               GCCATC TGC GATGGC               CTCTTTGAACACGCT  66 368
C2U40_RS12355 NONE
C2U40_RS12360 2697536 .. 2697552 + -10.1  -4.44915   CCCGGACAGCAAAAA              GGCCTCG CAA TGAGGCC              TTTTCTACATCATTC  93 91
C2U40_RS12400 2705517 .. 2705547 +  -8.9  -5.71712   ATTCCTTGTTTGATG       ACCCGGCCTTGTC CTTGC GACGACGCCGGGA       TTTTTTTATCTGCGC 100 300
C2U40_RS12405 2706485 .. 2706514 +   -15  -3.89346   AAGCCTCCCCGCTCT       GAAGACCGGCCC ACTCAA GGGCCGGTCTGC        TTTCTGGCCTGACAC 100 39
C2U40_RS12410 2708167 .. 2708185 + -14.6  -5.84381   CCAGATGAACAAAAA             GCCGACTC ACT GAGTCGGC             TTTTTTTGTTGCTAC 100 47
C2U40_RS12420 2709961 .. 2709996 + -16.8  -4.03413   GGATCAGCCATGCCC    TTGCGGGCCCTCGCCA CCGG TGGCAAGGGCCCGCTG     TTTATCTGGGCCCCT 100 71
C2U40_RS12460 2716761 .. 2716780 + -13.6  -3.89354   CGACACAAAAGAAAA            TGCCCTGC AATT GCAGGGCA             TTGTTGGTTTCCAAC 100 78
        zapA NONE
        ssrS 2726034 .. 2726055 + -15.9   -5.5454   TACCAACAGCAAAAA           GCCCGTCAC CAAC GTGACGGGC            TTTTTCTTTATTTCC 100 36
C2U40_RS12520 2732173 .. 2732188 +  -3.2  -5.12916   CTCTGCATTGCTACT              CTGGTA ATCC TTCCAG               TTTTATTCTTTTATA  77 201
C2U40_RS12525 2733170 .. 2733191 + -10.9  -5.46129   AAAGAATTAAGAAAA           GGGATAGCG TTGA TGCTATCCC            TTTTTTCGTTTGTTC 100 265
C2U40_RS12550 2736773 .. 2736788 + -11.8  -5.61596   CACACGTACCACAAA              CCCGGC CTAG GCCGGG               TTTTTTTATGGCCGT 100 56
C2U40_RS12560 NONE
C2U40_RS12565 2741028 .. 2741043 +  -4.6  -3.48004   GCAGTATCGGAATGC              TCGGCG CCAT CGCCAA               CTTTTGTTATGATCC  53 58
C2U40_RS12570 2741818 .. 2741842 + -17.2  -3.14132   CACCACGCTGGAACA          GATGGCCGCC ACTCC GGCGGCCATC          TTGCTCGGGGCCGCC 100 48
C2U40_RS12575 2742733 .. 2742761 +  -3.7  -2.55712   TGTGCTGGAGCAGCT        GCATGGCTAGATG GCT CATCCTGCTCTGC        CTGTTGTGCATGTCG  43 16
C2U40_RS12580 2743590 .. 2743607 + -12.7  -5.68438   TTTCACAATAAAAAA             CACCGGC CAAC GCCGGTG              TTTTTTATTTAGTAG 100 59
C2U40_RS12625 NONE
C2U40_RS12630 2752370 .. 2752387 +  -8.4  -5.24531   AGTGAAATAAAAAAA             TCCGGC ACATTG GCCGGA              TTTTTTATGCACGCT 100 59
C2U40_RS12640 NONE
C2U40_RS12645 2754939 .. 2754951 +  -4.8  -3.85698   GGTTGCCAGCCAATA                GAGC CGAAA GCTC                TTTGTCAGCGACGCC  60 238
C2U40_RS12660 2758125 .. 2758136 +  -3.6  -2.91912   CCCTTGCTTCTTTCT                GCGG CCTC CTGC                 TGTATCGCTCGGTCC  45 443
C2U40_RS12665 NONE
C2U40_RS12670 2759270 .. 2759301 +  -5.1  -4.13654   AATCTTCCAATCGAC      CCCCGAAGCTGTT CACCGC GACACCTTGGGGG       TTTGTCGTTTGGGAG  65 172
C2U40_RS12675 2761471 .. 2761492 + -10.1  -3.34398   AACTACATGTGAGAC           GGGGGGAGT TTAG AGTCCCCCC            TATTTCCAAGACCAA  72 41
C2U40_RS12680 2762622 .. 2762640 + -11.8  -3.78015   TGCTTTGGATGAATT             CGACGATT AAT AATCGTCG             TTCTGATTTTTAATT  88 16
C2U40_RS12700 2765275 .. 2765298 + -13.2  -2.61582   TCCGCTAATCCAATC          GACCCCTAGA AACC TCTGGGGGTC           ATTCTCCCTGACCTA  81 33
C2U40_RS12705 2766309 .. 2766326 + -11.3  -3.21342   CTATTCATGAAAAAA             GGGAACC TTGC GGTTCCC              TCTTCGTCATTACTT  77 142
C2U40_RS12720 2770619 .. 2770651 + -17.8  -2.52623   AAATCGACAATCCGC      TGACGGCATCGGAG CCATC CCCCGATGCCGTCA      ATATTCTGACACACC 100 61
C2U40_RS12740 2782960 .. 2782975 +  -3.2  -3.09313   AAATAACGGCCTGCT              CGAATC ATTG GAGTCG               TCTATGTCTGTCATT  43 72
        pflA 2783805 .. 2783831 + -12.3  -3.60475   AATACTGATAGCTCA         GGGGCTGGC CGGGAAAAC GCCAGCCCC         TTTCACATCGGGCTT  88 33
C2U40_RS12750 2784547 .. 2784562 + -11.8  -5.63504   CGCAGCCACAAAAAA              GCCCGC AATT GCGGGC               TTTTTTTATGGCGTT 100 47
C2U40_RS12775 2789292 .. 2789323 + -24.6  -3.53012   ACCCACCGCCAACAA      CGACAAGCCCGGCA CTGC TGCCGGGCTTGTCG       TTTAAAAGAGGGGAG 100 54
C2U40_RS12785 2791336 .. 2791351 + -11.8  -3.29461   TGCGGCCATAAAAAA              GGCCCC GTGA GGGGCC               TTCTACCAACGCTTC  80 30
C2U40_RS12805 2794092 .. 2794111 +   -15   -3.4252   ATCATAAAACGACAA            GGGCGCAC CGAG GTGCGCCC             TTGTCGTGGGTGAGA 100 110
C2U40_RS12815 NONE
C2U40_RS12820 NONE
C2U40_RS12825 2797923 .. 2797939 +  -9.4  -4.60487   TACGAACAAACAAAA              GGGAGC ACTCG GCTCCC              TTTTTCACGATCATC  91 59
        ppk2 2799828 .. 2799853 +  -8.9  -3.36515   AAAGGAAAACCTCGG         CAGCCGCCCCT GATC AGGTGCGGATG          TATTTGGCCGTGCGC  65 128
C2U40_RS12865 NONE
C2U40_RS12870 2808523 .. 2808539 +  -9.4   -5.4505   TGTGCCCTTTGAAAA              CCCGCT CCTGC AGCGGG              TTTTTTATTGCCGAC 100 50
C2U40_RS12875 2810945 .. 2810962 +  -3.3  -2.78463   TGAGTGCCAGCCTGC             GCTACAC CTTC GTGGGGC              TCTGATGCACGCACT  41 3
C2U40_RS12880 NONE
C2U40_RS12885 NONE
C2U40_RS12890 NONE
C2U40_RS12895 2817482 .. 2817540 + -16.1  -2.56046   TGCTGGTGCGCTGAT GAAGCCGGGTGGCCAG--GGGATCCCG ATGAGCA CAGGATCCCGGCTGGCCACCCGGCCTG TCGCTTAGCCTTTCC 100 27
C2U40_RS12900 2818232 .. 2818253 + -10.9  -4.57837   ATGAATACAACAAAA           TAGAGCGCC GAAT GGCGCTTTA            TTTTTAGCCAAATGT  95 75
C2U40_RS12905 NONE
C2U40_RS12910 2819749 .. 2819788 + -22.4   -3.4072   CGCACAAGCGGGAGT  GCAAAAGCAAAAGGGGCC GACA GGCCCCTTTTGCTTTTGG   TTATCGTCAGCCGTG 100 52
C2U40_RS12935 2825820 .. 2825830 +  -2.4  -3.72324   CGGTGAGGATGCTGG                 CCAC GTT GAGG                 TTGTTGGTGACGATG  52 416
C2U40_RS12950 NONE
        glpK 2830581 .. 2830608 +   -20  -5.00616   TGAGCTGAAAAACGT        GAGAGGCCGACA GCAA TGTCGGCCTCTC         TTTTTTAGCGCCGCC 100 61
C2U40_RS12965 2832313 .. 2832336 +    -3  -4.07568   TTCCAATGGCCATTG          GCTTGTTGGT TCTC ACCTACCGGC           TTTTCCGCCACCACA  58 147
C2U40_RS12970 NONE
C2U40_RS12975 2833361 .. 2833387 +  -8.7  -4.22214   GGCCAATGCCTGATG        GCAAGGGGGCGT CCCG GCGCTCCC-TGC         TTCTTTTACCTCACT  78 28
C2U40_RS12980 2833820 .. 2833830 +  -2.4  -2.71712   CGCCGCTATCAACCG                 CTGG AGG CCTG                 ATTTGCCGCGCCGCC  39 14
C2U40_RS12985 2834859 .. 2834881 + -19.2  -5.81622   TTTATCCAACCCCTA           GCGGGAGGCA CTG TGCCTCCCGC           TTTTTTTGGTTTTGT 100 202
C2U40_RS12990 2836257 .. 2836276 + -13.6  -4.28548   AGCAAGATGCAAAAA            GGCCGACA CCTG TGTCGGCC             TTTTCATGGCTGCGT 100 52
C2U40_RS13010 2840740 .. 2840762 +  -7.6  -2.96984   GGGTTCAGGCCGGCT           GCGCCAGCTG GGC CACCTGCCGC           TCTATGCTGCCTTTG  58 73
C2U40_RS13020 NONE
C2U40_RS13025 2842358 .. 2842372 +  -7.1  -2.82681   CAGACAGGTCCCCAT               CAGGG AGCAG CCCTG               TATAATGGCGTTTTC  53 59
C2U40_RS13030 NONE
C2U40_RS13035 2843132 .. 2843174 +  -4.8   -3.8211   GAGGGGCTGACTCGG CGCTCGGGCAGTGCAAGGA TATGGC TCCCC-TACTGCCCGAGAG TTGTTATGGATAACC  58 89
C2U40_RS13040 2844787 .. 2844818 + -10.1  -3.53012   AGCGGTTCGCGCCAG      CAGGCGCGCGGCGC CCCCT GT-CCCCGCGCCTG      TTTGACCAGCGCCAA  68 433
C2U40_RS13050 NONE
C2U40_RS13055 2847113 .. 2847131 +   -16  -4.70659   TCGCCAAAACAAAAA             CACCGGCC TGT GGCCGGTG             TTTTTCACTGTCAAC 100 46
C2U40_RS13070 2850213 .. 2850240 + -21.4  -3.74693   CGGATCCCCGTACCA        CAGAGGGCAGCC CCGG GGCTGCCCTCTG         TTTGCTCGGATGAGC 100 62
C2U40_RS13075 2852144 .. 2852160 + -10.1  -2.54098   AGTAGACCGACTCGA              TGGGGCC GCA GGCTCCA              CTCTTGGTTACCGGC  59 211
C2U40_RS13090 2854031 .. 2854051 + -14.7   -4.3586   TGCGCTCATAAAAAA            TGGCTCGCC AAT GGCGAGCCG            TTTTGGTCTGGGTCA 100 50
C2U40_RS13115 2858769 .. 2858793 + -17.1    -4.386   CTTCTCCCATCGGCA          ACGGGCCACCC TGA GGGTGGCCCGC          TTTTCTGACCCATTC 100 49
C2U40_RS13120 2860960 .. 2860982 + -16.3  -5.43866   GCGCCCGTCACCTAC           GCCAGCCCC CTGCC GGGGCTGGC           TTTTTTTGCCAATTC 100 45
C2U40_RS13125 2861597 .. 2861616 +  -3.5  -3.10796   AGCGGGCGAGCTGGC            GGAGCAT CTCGAT AAGCTCC             TCTTCGCTGCTGGGC  46 194
C2U40_RS13140 2864206 .. 2864238 +  -8.5  -3.72576   ACATCAAGCTCAACG     GTA-TGCGGTGCTG CGCTAA CAGCGCCGCGGTAC      TTTGATGACGGACAG  72 7
        pepT 2866259 .. 2866286 + -22.8  -3.60296   ACCGCCATGACCAAA        GAGGGGAGCCGG TTAA CCGGCTCCCCTC         TTTGCCATCAAACTG 100 54
C2U40_RS13160 2868113 .. 2868138 + -19.1  -4.08546   CGAGCGCCACAACGA         GAGAGGGAGGC CTGT GCCTCCCTCTC          TTTGTCATTGATGCT 100 42
C2U40_RS13185 2872341 .. 2872357 +  -2.9   -3.6216   GCAGGGTCAGGATGA              GATTGGC CTC GTCGGTC              TTGTGCTTGTTGATG  51 240
C2U40_RS13195 2874356 .. 2874369 +  -4.5  -2.80195   ATAACGGCGAGATAG               TCGGC CTGA GCTGA                TGGTTGATGGTGAGT  46 12
C2U40_RS13200 2874561 .. 2874582 + -18.7  -3.82061   CTGCCAAAACAACAA           GGCCCCGCC GATT GGCGGGGCC            TTCTGTTATCTGTGA 100 107
C2U40_RS13215 NONE
        moeB 2879680 .. 2879703 +   -21  -4.72272   AGAAAAGACGAAAAA          GCCCGCCGGG TCTC CCCGGCGGGC           TTTTTACTGAACAGA 100 74
C2U40_RS13250 2887012 .. 2887022 +  -4.6  -3.28001   GGTCAGCACCCGTAC                 CGTG GCT CGCG                 TTCGCTTTAAACATC  51 60
C2U40_RS13255 NONE
C2U40_RS13260 2888858 .. 2888875 + -14.1  -3.62695   CATTGCAAACAACAA             GGCGGCC CTGG GGCCGCC              TCTTCTTTATACCGG 100 92
C2U40_RS13275 NONE
C2U40_RS13280 2894593 .. 2894621 + -26.1  -2.71364   CTCGGCCTGTAAACG        GCAGGGCCCGGCA GGG TGCCGGGCCCTGC        TCGTTCGAGCGATCA 100 29
C2U40_RS13285 2895323 .. 2895348 +  -4.5  -2.97475   GACTTCTTCGACTGA         CGGGACGCCCC GAAT GGGGTGAGCTG          ATTTGTGCTGACGGG  47 26
C2U40_RS13290 2896129 .. 2896148 +  -6.4  -2.70932   TACGATTACCAGGCC            CCCTGACA AGCT TGTCAGGA             TAATTGCCAAAGCAG  51 20
C2U40_RS13295 2896911 .. 2896935 +    -2  -3.57462   GCAGGTATCTTGTTG         GCCGC-GCCAG CACC CTGGCCGCAGA          TTTCAGGCTGACATC  49 175
C2U40_RS13300 2897526 .. 2897558 +  -3.9  -2.89191   GCTGGCCCACCGCAT      GCTGGACAGCTGGTG ATC CCCCGTCTTGCCAGC      TATGTCGCCATCTCG  45 10
C2U40_RS13305 NONE
C2U40_RS13310 2900603 .. 2900621 +  -5.8  -3.95022   CGGATGATCTGCTCG             CAGCGCTG CTG CTGCGCCG             TTTCATCTTCCTGCG  62 214
C2U40_RS13320 NONE
C2U40_RS13325 NONE
C2U40_RS13330 2904644 .. 2904676 + -26.5  -3.28791   CGCCGGCGATAAAAA      GCAGAAGAGGGAGCC CAT GGCTCCCTCTTCTGC      TTATACCGAAACCCT 100 44
C2U40_RS13340 2906609 .. 2906630 + -15.9  -4.00868   TGTCGCAGACAAAAA           GAGAGCGCC CAAG GGCGCTCTC            TTTCATTGTCGGTCA 100 68
C2U40_RS13390 2918156 .. 2918179 + -11.8  -5.49729   CAATTTCCCCGAAAA          TAGCCTAGTC TCGC GACTGGGCTA           TTTTTTTGCCTGCTT 100 39
C2U40_RS13395 NONE
C2U40_RS13400 2922325 .. 2922351 + -16.6   -5.1963   AGTCCTTGAGATAGC         AAAACCCCGGCC ACT GGCCGGGGTTTC         TTTTTATTCATTGCC 100 61
C2U40_RS13420 NONE
C2U40_RS13425 2927019 .. 2927042 + -16.8  -3.09116   AGTAATAAAATGCAA          CAAGGGAGGC CCAG GCCTCCCTTG           TCATTTCTATCTACC 100 52
C2U40_RS13455 NONE
        ppk1 NONE
         ppx 2937511 .. 2937528 + -12.7  -4.74801   CCCAGAAATAACAAA             GCCGCCT CGAC AGGCGGC              TTTTTCATGCGGTTA 100 51
C2U40_RS13480 2940360 .. 2940376 +  -2.1  -2.57931   AGGCAGTGGCCGATG              CCGACCA GGC TGAGCGG              ATTATAGCCGCTGAC  38 332
        gloB 2941576 .. 2941591 +    -4  -5.00616   ACCTTCACAGTGCTG              CGATCCT GGA AGGA-CG              TTTTTTGAACAAACC  76 2
C2U40_RS13495 2943257 .. 2943288 + -13.9  -4.79667   CCCCGCCAAAAGCGG      TAATGCCAGTCAG TTAAGC CTGACTGGCATTG       TTTTTACTAGGTTTT 100 65
C2U40_RS13510 2945946 .. 2945988 + -10.1  -3.05596   AGACTGGTACCGGAC GGGATTTTC-CCTGT-TCGTC GAT GGCGACATAGGTGAAGATCCC TTCGGTCACGCAGTA  69 49
        raiA 2953975 .. 2953990 + -11.8  -4.72272   GCCAGAAACGACAAA              GGCGGG ATCT CCCGCC               TTTTTGCTGCCCGAA 100 57
C2U40_RS13550 NONE
C2U40_RS13555 2954977 .. 2955012 + -15.6   -3.1372   CCCATCAACGCCGCC    CATAAAAACGGGAGGC TTGC GCCTCCCGTTTTTGTC     TCTTCCTGCCCGCTA 100 116
C2U40_RS13570 2961724 .. 2961741 +  -4.1  -2.65354   CCCAGAACCCGGCTT             GCTGC CCGTGCCC GCAGC              TGAATTTGCCATGAC  43 5
C2U40_RS13575 2962337 .. 2962358 +  -9.3  -2.54193   CATCCTTTGGCAGCA           GGGCCGGCG CAAA TGCCAGCCC            TCGGTTGCAATACTG  56 258
C2U40_RS13585 NONE
C2U40_RS13590 2963992 .. 2964049 +  -5.6  -2.63289   GCCGGATAACAAGGA CGCCTGATGAG-CGGCTC-CCGCCTGC TGCTGGT GCTGGTGATGGGCTGCCTCATC-GGCG CCTTTTTCGCCTTCG  47 19
C2U40_RS13595 NONE
C2U40_RS13600 NONE
C2U40_RS13605 NONE
C2U40_RS13610 2969696 .. 2969711 +  -2.5  -3.53224   AATCCCGTTTTTGAC              CGAGG AGTTCA CCTTG               TTTGACCGCCACCTG  47 27
C2U40_RS13615 2970391 .. 2970404 +  -2.3  -3.36803   CGACACTCTTTTTCA               GGCTC ATGA GAACC                TTATGCGTCGCCTTG  45 105
C2U40_RS13620 2971558 .. 2971586 + -15.4  -3.59979   CGCCTTGCCAACCAT       C-CACACTGCGCC TTCG GGCGCAGTGTGCG        TTTACAGTGCCCCCG 100 73
C2U40_RS13630 2973036 .. 2973055 +  -2.7  -2.71364   GCTCGGCCGGGGTCA            ATGGCGC CAGCAA GCGCCGC             TCGTTGGCCACGTGC  39 105
C2U40_RS13640 2974465 .. 2974485 + -12.6  -3.66178   AAGCGCAATAAAAAA            GAGGAGCC ATCAA GGCTCCTC            TTTCACATTCCGCGA  88 59
C2U40_RS13655 2977796 .. 2977806 +    -4  -2.66316   GGCGGTTAACAGTTT                 CAAA TCC TTTG                 TGATATAGTGCGCCC  43 32
C2U40_RS13660 NONE
C2U40_RS13665 NONE
C2U40_RS13670 2978971 .. 2978998 +   -20  -3.92075   TGCCAGCCTCTCTGA        CAACAAGGGCCC CGCG GGGCCCTTGTTG         TTTCTGACTCAGCCT 100 49
C2U40_RS13680 2980188 .. 2980204 +  -9.4  -5.38047   AGAGACAATAAAAAA              GCCAGC ATCAC GCTGGC              TTTTTTGTGTCCGTC 100 51
C2U40_RS13700 NONE
C2U40_RS13705 NONE
C2U40_RS13710 2990020 .. 2990038 +   -16  -5.14163   CTTGCGAAACAACAA             CGGCAGCC AGT GGCTGCCG             TTTTTATTGATAGAT 100 50
C2U40_RS13730 2995992 .. 2996004 +  -6.9  -4.25104   CGATCGCGCGCAGCA                GGGCG TGC TGCCC                TTTTAGTCAGCCGCC  72 7
C2U40_RS13735 NONE
C2U40_RS13740 2998224 .. 2998242 +    -3  -2.93382   AATGACCCTGCTCTC             CCTGCTCA GTC TCGGCGGG             TGTGTCAGTATGGAG  42 122
C2U40_RS13745 NONE
C2U40_RS13750 NONE
C2U40_RS13755 3001500 .. 3001517 + -14.1  -5.28778   ACACTCATGACAAAA             GCGCGCC ACAG GGCGCGC              TTTTTTATGACTGCT 100 46
C2U40_RS13765 3003275 .. 3003292 + -14.1   -3.9644   GTCATCCATAAAAAA             CGCCGGC ACTT GCCGGCG              TTGTTGTGTTGGGCG 100 44
C2U40_RS13775 3006504 .. 3006530 + -22.4  -3.81146   GTGACCACCACAAAA         CAACAGGGCCCG CGA CGGGCCCTGTTG         TTGTTGATTCAACGG 100 37
C2U40_RS13785 NONE
C2U40_RS13790 NONE
C2U40_RS13795 NONE
C2U40_RS13800 3010804 .. 3010828 + -17.1  -3.03441   TGGGAGTAATCGGAC          AGAGGCCCCGC ATC GCGGGGCCTCC          TGTTACCAGCTGATG 100 32
C2U40_RS13815 NONE
C2U40_RS13820 NONE
C2U40_RS13825 3015084 .. 3015117 + -17.4  -3.09557   CCCCGGCCTGATCCA     GTGCTGGCCCTGCC CATGGC GGCAGGGCCCGCGC      TCTCTTCCCCTACTT 100 30
C2U40_RS13830 NONE
C2U40_RS13835 3017197 .. 3017211 +  -8.5  -4.72272   ACCTGTTACCAAGAA               GGGGC CCTGC GCCCC               TTTTTGCTGCCCGCC  88 48
C2U40_RS13840 3017717 .. 3017735 + -13.1  -5.11063   CAACTTATCCTGCCA             GCCCGGC CCGAC GCCGGGC             TTTTTGTTGGCTGCT 100 66
C2U40_RS13855 3026081 .. 3026104 + -17.4   -4.3739   CAGCGATAACCCCAC          CGGCCGGGGG CCCG CTCCCGGCCG           TTTTCTCCCCGCATC 100 51
C2U40_RS13860 3027524 .. 3027534 +  -2.4  -2.77962   CAACAAAACCCCTCC                 GACG TAG CGGC                 CTTTGCCGTCTGACC  39 45
C2U40_RS13865 3029319 .. 3029338 +   -15  -3.54029   GCGCACAAAGCAAAA            CGGCTGCC CGAG GGCAGCCG             TTCTCATTGGTACGG 100 45
C2U40_RS13895 3035661 .. 3035684 + -11.7  -4.37991   GAGTCAGACGTGGCA          GGCCCTGCC CGACCA GGCAGGGTC           TTTTGACTCTTTTTC  95 39
C2U40_RS13900 3036934 .. 3036948 +  -4.2  -2.62935   CCGTGTCAGCCGGTC               CGGC CCCCGTC GCCG               CTCTTTCACGCTTAT  43 343
C2U40_RS13910 3038579 .. 3038596 + -12.7  -5.07486   TACTTTGCCTTAAAA             GCCGACC TCAG GGTCGGC              TTTTTGTTGCCCGTC 100 47
C2U40_RS13915 3040303 .. 3040329 + -19.5  -4.09685   ACCATTCAGTCAGTC         CAGCAGGCCCC ACCCG GGGGCCTGCTG         TTTTGCGCCCTGCCC 100 50
C2U40_RS13920 3041102 .. 3041133 + -11.6  -4.87803   ACCGGCAGGACAGAT      AAAAAACGGGAGGC GATG GCCTCCCGTTTTGC       TTTTCTTTGACGCTG 100 58
C2U40_RS13935 3044374 .. 3044389 + -11.8  -4.64157   CACCCCTCACAATAA              CGCGCC CGCC GGCGCG               TTTTGTACTTCTTTG 100 47
C2U40_RS13940 3045582 .. 3045609 +    -9  -4.13767   AGAGCGAACTCTGAT        GCCCGCCGGCGCG TCC CGCGCCGG-GCAC        TTTTCCCCTCCCCCC  81 27
C2U40_RS13965 NONE
        dapE NONE
C2U40_RS13975 NONE
C2U40_RS13980 3053320 .. 3053351 + -20.2  -2.89055   ACTGACTCGAGTCCG      CCGACAGGGGCACC CACG GGTGCCCCTGTCGC       TATCTGCCCACTTTG 100 36
C2U40_RS13985 3055272 .. 3055282 +  -3.2  -2.89793   TTCTGGAAGAAGATC                 CGGT CTG ATCG                 TCGTTGTCTGCCTCG  42 18
C2U40_RS13990 3056459 .. 3056474 +  -3.2  -2.71924   TGCCACAGGAGGCTG              CATGGA TGCG TCCCTG               ATTTACCAGAACCTG  41 59
C2U40_RS13995 3057693 .. 3057713 + -16.1  -4.77173   GCCAACAAAAGAGAA            GCCCCGGGC ACT GTCCGGGGC            TTTCTTTTATCGGAC 100 50
C2U40_RS14010 3061243 .. 3061268 + -14.7  -3.14051   CCTCATGAGTGCAGA         CCAAGGCCCCG GATC CGGGGCCTTGC          TGTTAATGAAGCTGA  95 47
C2U40_RS14015 NONE
C2U40_RS14020 3062310 .. 3062332 + -16.3  -3.98649   CCGCCAAATAAAGAA           GGGCCAGCC GACAA GGCTGGCCC           TTATTGTATCTTGTC 100 80
C2U40_RS14035 3064831 .. 3064845 +  -5.6  -2.63596   GCAACGGCCCCCACC               CCCCAC TCG GTGTGG               TGCTATCAGATCAGC  47 123
C2U40_RS14045 3067169 .. 3067185 + -11.5  -5.11063   CGCAATCGGCAGAAA              GGGTCGC ATG GCGGCCC              TTTTTATTGGCTGAT 100 44
C2U40_RS14050 3067634 .. 3067658 + -14.4  -4.07568   CTCTGATCCCATCCA          CAAAACCGGC CTCGC GCCGGTTTTG          TTTTAGCGCAGCCAG 100 35
C2U40_RS14055 3068428 .. 3068441 +  -9.5  -5.37043   GACGGGATCAAAAAA               GGCGC CAAG GCGCC                TTTTTTATATGCGGT 100 68
        smpB 3069964 .. 3069983 +   -15  -5.45802   GCTTGATGCTGCAAG            GTCCGGGC TCCT GCCCGGAC             TTTTTCTTTTCCGGC 100 44
        ssrA 3070515 .. 3070553 + -19.1  -3.68325   GTGACCAACGAAGTC   CAAGAAACCCGCAGAGC GTAAG GCTTTGCGGGTTTTTTG   TTGTCTTACGCTGTC 100 56
C2U40_RS14080 3072034 .. 3072045 +  -5.8  -2.78384   ATTAGATACAGGGGA                GAGC CTTG GCTC                 TCTCCTGCGACAAGA  51 172
C2U40_RS14100 3078443 .. 3078484 +  -4.1  -3.89346   CTTCCAACTGCATAA CGACCTCACCCGGACTGGC GTAA GCCAATCCGGGCGTAGCCA  TTTATGCCGTCAACA  58 53
C2U40_RS14105 NONE
C2U40_RS14110 3080594 .. 3080609 +  -4.6  -3.24747   GCTCAGCACAATGCC              CTGCTC GGTC GGGCGG               TTACTGGTCTCACGC  48 131
C2U40_RS14120 NONE
C2U40_RS14125 3082336 .. 3082362 + -10.8  -4.93296   GAGGCTTGCAATAGA         AAGAGGGAGGCA TCA TGCCTCCCTCGC         TTTTTGTCCTGATAC 100 182
C2U40_RS14130 NONE
C2U40_RS14135 NONE
C2U40_RS14140 NONE
C2U40_RS14145 3084047 .. 3084072 +  -3.1  -2.86259   TACACCCCGCACACC         TTGGCGGCCTG AACG CCGCCAGCCAA          TCCTGTTGTTACATC  42 14
C2U40_RS14150 NONE
C2U40_RS14155 3084945 .. 3084969 +  -4.3  -3.14132   CCATGGCCTGACAGC          CGTCAGC AACGAAGATGC GCTGACG          TTGCTGGAGAAGGCC  49 115
C2U40_RS14160 3085543 .. 3085559 +  -8.7  -3.04461   AGTCGTGGCAAGCCC              GCCGATG CCA TATCGGC              TCTTGAAGCTGGCTG  62 353
C2U40_RS14200 3091818 .. 3091836 +  -4.5  -4.32034   ATCCGTTTCAGGTGG             TGGCTTG TTACC CGGGCCA             TTTTCATCCTGATGG  67 131
C2U40_RS14205 3093025 .. 3093036 +  -2.2   -2.7186   AATGGCGAAGAAACG                GTCT AAAT AGGC                 TGATTCAAGGCATTT  39 61
C2U40_RS14280 NONE
C2U40_RS14285 3114770 .. 3114793 + -18.2   -5.5353   CCAAACGTTTGGAAA          GGGCCACCTC GCAA GAGGTGGCCC           TTTTTTATTCCTCTA 100 358
C2U40_RS14305 3122229 .. 3122252 +   -11  -3.04792   CAGTGCGCCAGGTTG          GC-CGGGTTGC CGA GCAGCCCGTGC          TGTTCGGCATACTCC  66 402
C2U40_RS14315 3124416 .. 3124432 + -13.7  -4.95155   TTTTCAGCCATAAAA              CCCGCCA GAC TGGCGGG              TTTTTCTCGTGTGGG 100 46
C2U40_RS14320 3124998 .. 3125011 +  -2.3  -2.87132   GTTGACAGACAGGGT               GCTGG TAAA CTGGC                TGTCTCCAAACACAC  41 117
C2U40_RS14325 3126265 .. 3126283 + -13.8  -4.35524   ATGAACCTAAAAAAA             CCGGCGCT CAT GGCGCCGG             TTTTGCATTTCAGGG 100 37
        manA 3129991 .. 3130015 + -18.7  -5.04385   ATCGACCCATGACCA          CAAGGGCCATC TAG GATGGCCCTTG          TTTTTTGGCGGTCTC 100 54
C2U40_RS14345 3130715 .. 3130735 + -16.1   -4.3208   AACCGCAATAAAAAA            CCCCCGCCG TGC TGGCGGGGG            TTTTGCATTCTGCCG 100 30
C2U40_RS14355 3133589 .. 3133609 + -14.7  -4.39426   AGAGTACCTACGACA            GAGGGGGCC AAG GGCCCCTTC            TTTTATCCCGGTATC 100 52
C2U40_RS14360 3134110 .. 3134123 +  -3.7  -2.52543   GTGACCGAACAGCCG               CCGCC CGTT GGCGC                TGGCTTCGCCAACAT  42 84
C2U40_RS14365 3134870 .. 3134898 + -12.4  -2.87132   GGCCGCCTCAAAATA       GC-AACCGCCGCC CTCA GGCGGCGGTGCGC        TATCTGGCCAGCAGC  78 25
C2U40_RS14380 3139238 .. 3139251 +  -6.7  -2.52464   CGCGAGCGCAAAAAT               GTGAG CCTG CTCAC                TGCGTTGGCAAGGAG  52 189
C2U40_RS14385 NONE
C2U40_RS14390 NONE
C2U40_RS14395 NONE
C2U40_RS14400 3141285 .. 3141307 +  -4.2  -2.98823   ATTAGAGTGTGAGCG           CTAGTCAC AACTACA GTGATTAG           TCTCTGTCGGGGGAA  46 36
C2U40_RS14405 3142133 .. 3142146 +  -3.1  -3.78022   AGCGCACGGGTCAGG               TACTG GATA CGGTA                TTTAATGCGTATAGC  53 377
C2U40_RS14410 3143247 .. 3143284 +  -7.8  -4.42386   TCACGTCATCAATTC   GGTAG-GGTGCAATAAG AGCAG CGCATTGCACCTCTACC   TTTTCTGCCTCCAAA  78 76
C2U40_RS14415 3145769 .. 3145794 + -17.7  -4.08948   GATACGGCAAAGGAA         CAAGAGAGGCC CCAT GGCCTCTCTTG          TTGTTTCTCGACTTA 100 57
C2U40_RS14420 NONE
C2U40_RS14425 3147893 .. 3147920 + -21.4  -4.42788   GCGGCGACCTAACCG        GACGAGGCCACC TGCG GGTGGCCTCGTC         TTTTGTCGGGTTCGA 100 144
C2U40_RS14430 3149764 .. 3149785 + -18.7  -5.26918   TCCGTAGTGTGCATT           CGGCCCGCC CTCT GGCGGGCCG            TTTTTTATCCCCTCT 100 120
C2U40_RS14435 NONE
C2U40_RS14440 3151045 .. 3151055 +  -2.4  -3.14132   GAGCGGCTGGCCTCC                 CGTC CCC GTCG                 TTCATGCCCGCGACA  43 39
C2U40_RS14445 NONE
C2U40_RS14450 3152592 .. 3152604 +  -6.2  -4.03234   CCGCTTGCCGCTGTC                GGCC CTCAA GGCC                TTTATATAAGAGCCG  68 4
        mnmA NONE
C2U40_RS14460 NONE
C2U40_RS14465 3156219 .. 3156260 + -15.2  -4.52589   AACGGATAAATGACA CCACCGGGGCCCTG-TGCA TGATC TGCAACAGGGCCCCGGTTA TTTTATGTGGCACCC 100 40
C2U40_RS14470 3157516 .. 3157545 + -15.9  -3.90922   GCTGACGGACAGAGG       TAAAAAAGGCGCC CGAG GGCGCCTTTTTTG        TTATTTGCAACCGAT 100 41
C2U40_RS14510 3168503 .. 3168521 +   -16  -4.68593   TTGTGAAATAAAAAA             GGGGAGCC AGT GGCTCCCC             TTTTTGCATGATGCA 100 60
C2U40_RS14520 3169783 .. 3169802 + -16.4  -5.29782   CCGTTCTTGCCAAAA            CGCCCCGC TCTT GCGGGGCG             TTTTTTATGCCTGTG 100 47
C2U40_RS14730 3209876 .. 3209898 + -13.5   -5.4505   AGCGCCAACAAAAAA           GCCAGTCAG TGACC CTGACTGGC           TTTTTTGTTGGCGCC 100 50
C2U40_RS14735 3210764 .. 3210776 +  -6.2  -3.14564   GGGCTCTCGTCTGCT                GCGC CCCAT GCGC                TTCATCCGCCGCTCG  54 42
C2U40_RS14740 3212149 .. 3212174 +  -8.9  -2.52464   ATCCCGGCCCACACA         CTGCACCTGCC ACCC GGCAGGCACAG          TGCCTTGCGGCGCAG  58 45
C2U40_RS14750 3214607 .. 3214631 + -13.6  -2.88579   CCCACTCTTCGTAAG         CAG-CGGGGGC TTCG GCCCCCGGCTG          TCTCTGCCACCTTCC  86 27
         pyk 3216232 .. 3216249 + -12.7  -5.57054   CACCGGCACCAAAAA             CGGCTCC CGCA GGAGCCG              TTTTTTTAGGTTCTT 100 49
C2U40_RS14760 NONE
C2U40_RS14785 3226153 .. 3226165 +  -4.1  -3.17194   GCCCACTCATAAAAC                TGAGT ACA GCTCA                TTGACTTGCCCCGCT  47 61
C2U40_RS14825 NONE
C2U40_RS14830 3232866 .. 3232900 +  -4.8  -3.56643   CGGTAATGAGCAGGT     TCTGGCCCCGGCGCAG CCA CTCTCCTTGGGCCAGG     TTTGCCACCTGTGAC  55 518
         def 3235614 .. 3235633 +  -7.8  -2.71144   GACTGGATGGTCAAG            CAAGTGCG ATTA CGCACATG             TCGTTGCCCCAGCTG  57 327
C2U40_RS14850 NONE
C2U40_RS14855 3236902 .. 3236914 +  -4.1  -3.70751   ATTTTTACGTGGACC                GTTGA AAC TCAGC                TTGTTGGCCTTCTTC  56 21
C2U40_RS14865 NONE
C2U40_RS14870 3240596 .. 3240616 +  -5.3   -3.1005   AAGCGGATGATTTTG            CAGCCTGGG TTT CAGAGGCTG            TGTTGGGCTGTATTT  50 169
C2U40_RS14885 NONE
C2U40_RS14890 3244298 .. 3244340 +  -8.6  -3.01684   CTGAACGTGGTTATT CAGTG-GCAGAAATATCTG ACCGGC CGGATGTTTCTGCACACAG TCTCTATAAATGGTT  62 291
C2U40_RS14950 3259961 .. 3259971 +  -6.8  -4.13282   GCAGCTGTTGCTCTT                 GGTC GTT GACC                 TTTTGGCGGTATCCT  70 428
C2U40_RS14980 3265934 .. 3265946 +  -4.8  -3.66356   ATGCAAGAGGCCCAA                GCTG GCTGG CAGC                TTTGGCCTTGAAGAT  55 176
C2U40_RS14990 NONE
C2U40_RS14995 3268494 .. 3268515 + -14.5  -5.47218   ACGCCATCAACAAAA           CAGGCTCAC CGAG GTGAGCCTG            TTTTTTTCAATACGG 100 107
C2U40_RS15015 NONE
C2U40_RS15020 3273098 .. 3273115 + -11.3  -5.44119   TCAGGCAAAAAAAAA             TGGCGCA TAAC TGCGCCA              TTTTTTTCGCATGGA 100 135
        purU 3275563 .. 3275592 + -19.5  -2.87132   CCCGGCCACTGAAAA       CAACAAAGGCTCC CGCG GGAGCCTTTGTTG        TATGTGCACGAAAGC 100 42
C2U40_RS15050 NONE
C2U40_RS15060 3281213 .. 3281227 +  -2.7  -5.00884   GAAAAGTCAGTAATG               GCGCG GCCTG CGCGG               TTTTTTGCAAGCCGT  74 67
C2U40_RS15065 3282781 .. 3282802 + -12.3  -3.32803   CGGCAGTCGCCGCGC           GAGGCCG-CC ACC GGACGGCCTC           TCTATTTGGTCTGCT  83 43
C2U40_RS15070 3283721 .. 3283737 + -10.8  -4.25104   GACCAAGTTACCCTG              CGGGCC CTTGC GGCCCG              TTTTCGTGCCCGCCA  91 61
C2U40_RS15095 3287234 .. 3287254 +  -5.3  -2.88861   CCTTGCAGATGACAA            GGCCCGC CCATGAA GCGCGCC            TGTCTGCGGCTCATA  49 13
C2U40_RS15100 3287908 .. 3287934 +    -2  -3.44149   TGAAGCCGATGATCC         CGAGCAGCAGCC CAA GGCCGCTGCCAA         TCTTCTCTCTTCTGG  47 256
C2U40_RS15110 NONE
C2U40_RS15115 3291390 .. 3291421 + -14.6  -4.13591   TATCTAAACTTCTCA      TAAAAAAGGCGACC ATCC GGTCGCCTTTTCTA       TTTCTATCGTCTTCC 100 60
C2U40_RS15140 NONE
C2U40_RS15145 3301344 .. 3301361 + -12.7  -4.34402   CATCCCCAATAAAAA             GAGCGCC TTGC GGCGCTC              TTTTGCTGTGGGAAC 100 67
C2U40_RS15155 3304232 .. 3304250 + -11.7  -4.83615   ATGAACCTAAAAAAA             TGCCGCC TCGAT GGCGGCA             TTTTTGTCAAAGCTC 100 37
C2U40_RS15165 3305684 .. 3305694 +  -3.2  -3.99153   GTGAACAACGTGCCA                 TCTC AAC GAGG                 ATTTTTTTATGATGA  55 315
C2U40_RS15170 3306760 .. 3306789 + -13.7  -4.03234   CCGTTCAGATAATGC       GAAAAGGGGATGC CACG GCATCCCCTTTTG        TTTGTCTCCCCGCCA 100 48
C2U40_RS15175 3308191 .. 3308208 + -12.7   -5.4833   CTTGGTGACCGAAAA             GGAGGCC ATCC GGCCTCC              TTTTTTATTGCCTGG 100 46
C2U40_RS15180 3309534 .. 3309551 + -11.3  -4.55128   GCGATGCACAAAAAA             GGGATGC CGAG GCATCCC              TTTTGCTTTGCGCCT 100 122
C2U40_RS15195 3313820 .. 3313830 +  -3.2  -2.90496   ACCGACATTATGCCC                 CTGC CCA GTAG                 TCGTTTAAGGAGACG  42 147
C2U40_RS15200 3314122 .. 3314143 + -15.9  -3.05022   ATCCCGCTCAAGCAA           GATGCCGCC CTCA GGCGGCATC            TGTCTGTATGGCGGC  95 50
C2U40_RS15210 3316939 .. 3316955 + -15.1  -3.89435   CATCCTTGTACCAAA              GCCCCGC CAT GCGGGGC              TTTACCTTGTTTGCC 100 49
C2U40_RS15215 3317779 .. 3317798 + -13.6  -4.42238   ACGCCCACAAAAAAA            GCCACGAC CCGG GTCGTGGC             TTTTCGTTGGAATGG 100 87
C2U40_RS15225 3321231 .. 3321254 + -16.8  -4.10552   CAGGCCGGATGCAAA          GAGGGGAAGC CGCG GCTTCCCCTC           TTTCGTTTCATCCAG 100 44
C2U40_RS15240 3323921 .. 3323941 + -18.3  -4.21462   CGCCCCGAAACAAAA            CGGGCAGCC AGT GGCTGCCCG            TTTTGCATGCTGGGT 100 48
C2U40_RS15250 3324915 .. 3324944 +  -9.2  -4.24204   CGTCCATGCACGTCT       TTGCCCGC-CGGC TACTC GCCGCGCGGGCCG       TTTTCGATGTCGGTG  82 71
C2U40_RS15270 3328914 .. 3328926 +  -4.8  -3.17075   GGACTGACCGGCTAC                CGGT ACGGC ACCG                TTGCCTTCCACCAGC  48 351
C2U40_RS15340 3342689 .. 3342706 + -14.1   -4.4959   TCCCGTGATCAACAA             GGGCGCC TGCG GGCGCCC              TTTTCATTGCTTAGA 100 46
C2U40_RS15350 3344585 .. 3344600 + -10.4  -3.19255   AAATGGCAACAAAAA              GGGAGC GCAA GCTCCC               TTAACTGTATCTTAA  70 69
C2U40_RS15355 3345517 .. 3345531 + -12.8  -3.39449   AGCACATCACTACCA               GGGGCC TTT GGCCCC               TTCATCTTGATAGGA  83 107
C2U40_RS15385 NONE
C2U40_RS15390 3354660 .. 3354670 +  -2.4  -3.28712   CATCTACTGAGGTGA                 CGGC AAT GACG                 TTATGGCACAGGCCC  45 31
C2U40_RS15395 3355728 .. 3355751 + -12.4  -5.53288   GGATGTGCTGCCTTT          CGCCCCGCTA TGCC TACCGGGGCG           TTTTTTTGCCTTCCG 100 60
C2U40_RS15400 3356657 .. 3356673 +  -3.5  -3.55548   GACGCAAGCCGGGTC              GAGGCAC ATT GCGCCCC              TTTGGCAAGCTGTTA  51 86
C2U40_RS15405 3357088 .. 3357110 + -19.2  -3.40639   AGCAGCAGTAAACAG           CAACCCCGGC CAG GCCGGGGTTG           TTCATTACTCCACTT 100 30
C2U40_RS15430 3362053 .. 3362081 + -21.9   -4.1347   TCAGCGCCCCCATAA        CAAAGAACCCGGC CAT GCCGGGTTCTTTG        TTTATCTGATTGAAG 100 48
C2U40_RS15450 3369599 .. 3369631 +   -15  -4.78149   TGAGCCGGTTGCTGG     TGACAACGGGGCTCC CTTG GGGGCCCCGTT-TCA      TTTTTGCATTATAAA 100 38
C2U40_RS15455 3370391 .. 3370405 +  -8.5  -5.36441   GCAGCCAATAAAAAA               GCGCC GGTCA GGCGC               TTTTTTATATGGGCA 100 73
C2U40_RS15480 3374710 .. 3374720 +  -2.6  -4.11216   CTCCAATACGCTGTT                 TTAT AAA ATAA                 TTTTCCAAATAAGGA  56 49
C2U40_RS15485 3375780 .. 3375793 +  -3.7   -2.6294   GAAAGCCGCTGATGA               CCAGC AGGA GCAGG                CTTCTCAATGATCTC  43 1
C2U40_RS15490 3376149 .. 3376161 +  -5.5  -3.42395   CTCACCTACCTCCTC                TCCAG GAT CTGGG                TATTTGCCTGATGAA  56 2
C2U40_RS15495 3377356 .. 3377373 + -12.7  -5.54192   GTGGCAATGCAACAA             GCCGGTC TATC GACCGGC              TTTTTTTAGGTTCAT 100 46
C2U40_RS15505 3380990 .. 3381020 + -25.6  -3.53343   GGAATCAAACCCAAA       CAGAGAGGGGAGCC AGT GGCTCCCCTCTCTG       TTTACACCAGCCGTT 100 51
C2U40_RS15515 NONE
C2U40_RS15520 NONE
C2U40_RS15525 3384127 .. 3384156 +  -4.2  -5.22289   TGAACAGCCTCAAAA       AGGGCCTGCAAA AAATGG TTGGCAGGCCTG        TTTTTATATTTGATA  84 38
C2U40_RS15530 3385830 .. 3385850 +  -2.3  -3.18681   GTTGAGCAGCAGGTG            GGAGACCAG CAT CAGGGCCCC            TTCCTGGGATTCGGG  43 474
C2U40_RS15540 3388460 .. 3388489 + -22.3  -3.53811   GCCAGCCGCTGAATA       TGACAAGGCCGGC ATAT GCCGGCCTTGTCA        TTTGCAACGGATAGG 100 45
C2U40_RS15550 NONE
C2U40_RS15555 3392569 .. 3392587 + -17.4  -5.60993   ACATCCCCATCACCA             CGCCCCGC CCA GCGGGGCG             TTTTTTTGTCCCGCC 100 40
C2U40_RS15560 3394647 .. 3394676 +  -3.5  -3.53811   GACCAGCTCGGGCTG       GTCGGATCATGAGC AGA GC-CATAAACCGGC       TTTGCCAGCCATCCC  51 14
C2U40_RS15565 3395278 .. 3395326 + -17.8  -3.14132   CCTGCCCGCCAGCCT GTGACCTGCAACAAAAAGCCCCGC ACT GCGGGGCTTTTT-TT-CGGGTTAC TTGATGGCGCAGACA 100 22
C2U40_RS15580 3398805 .. 3398824 +   -15  -3.81146   CCGGCCATAAAAAAA            GCCGCCTC TTGC GAGGCGGC             TTCTTCATTCAAGCG 100 44
C2U40_RS15590 3401551 .. 3401561 +  -6.8  -2.52015   CTTAAGGGACACTAC                 CAGC CAC GCTG                 ATTGATGAATATGAC  52 14
C2U40_RS15595 3403545 .. 3403565 +  -2.5  -4.57569   TTGGGGGCCAGCAGG           TC-GGCGC AGGCCA GCGCCCGG            TTTTTCAGAAAATCG  68 480
C2U40_RS15705 3430734 .. 3430752 + -13.1  -5.35224   ACGGTTAACATCAAA             CCCCGGC CTCCC GCCGGGG             TTTTGTTTTTATCAG 100 33
C2U40_RS15710 3433459 .. 3433506 +  -2.7  -3.00946   AGTCGGCCGATGATG AGGGCAGGC-CGG-G-CCCGTGAA GGC TTCACAAGACGCCGAGTCTGCCCC TGATTTATCAAGCAG  43 6
        dapD 3434488 .. 3434517 + -17.3  -4.08394   ACAGTTTGCGGTGAT       TTAAAAGGGCGCC TGAT GGCGCCCTTTTGA        TTTTGGCGCCCCTGT 100 41
C2U40_RS15720 3435003 .. 3435018 + -11.8  -5.28942   GTCTGATGCAGCAAA              GGCGCC CATG GGCGCC               TTTTTCTTTGAGCTG 100 45
C2U40_RS15755 NONE
C2U40_RS15760 3443151 .. 3443186 +  -3.2   -2.9155   TGCCACCCCACCGGG    TGCCCACCCTGT AAATCTGCCGCC ACAGGGCGGGCC     TATAATGTTCAGGAA  42 12
C2U40_RS15765 3443485 .. 3443497 +  -3.4  -2.88544   TGTTCAGCGCCCCAC                GCTT TGGTT AAGC                TCTCTGCCCGTCCAG  42 52
C2U40_RS15770 NONE
C2U40_RS15775 3444656 .. 3444677 + -15.9  -4.86621   TGAACCAAACAAAAA           CGCCTTGCC GGTC GGCAAGGCG            TTTTTCATTGCAACT 100 50
C2U40_RS15785 3446332 .. 3446381 +  -7.1  -3.16881   CTGTCAGTAAACTCT GGAC-GCACGGG-G-GCGGGCTTG GATAA CATGCCCTCACTCCCGTGCTGCCC TTAATCCAATGAATC  57 102
C2U40_RS15790 NONE
C2U40_RS15795 3450447 .. 3450468 + -10.1  -4.36914   CTACTATCAAATCCA           AGGGATGCC ACAG GGCATCCCG            TTTTCTCCCCAGGGA  90 102
C2U40_RS15800 3451898 .. 3451914 + -15.1  -5.24129   GCACAGCTGAAACGA              GGGGCGC ATG GCGCCCC              TTTTTTGTCGCAGGG 100 47
C2U40_RS15805 NONE
C2U40_RS15810 3453987 .. 3454010 + -11.8  -4.53303   CAAGATATTGATTTT          TAAAGGGAGC TTAG GCTCCCTTTG           TTTTATCTCGCGGTG 100 48
C2U40_RS15815 3454544 .. 3454569 + -19.1  -3.42699   GCGCAGAAATGACAA         GGCCGACAACC CGTG GGTTGTCGGCC          TTGTGGTCAGTGGCT 100 43
C2U40_RS15850 3461564 .. 3461587 + -18.2  -2.59431   TTTTGCAAAAAATAA          CGGGCTGACC ATCA GGTCAGCCCG           TCGGTTATCCGGCAC 100 44
C2U40_RS15900 NONE
C2U40_RS15905 NONE
C2U40_RS15910 3472033 .. 3472048 +    -6  -4.11404   GCCACCCCGCGCGCT              GGGTCG CCGG CGCCCC               TTTCTATACTCTGGC  68 61
C2U40_RS15915 3472511 .. 3472524 +  -2.3  -3.36073   AATGGCGCAATTTTC               CCAGA GGAG TCAGG                TATTTGAACACTGTC  45 94
C2U40_RS15920 NONE
C2U40_RS15925 3474934 .. 3474951 + -12.7  -5.66684   CAGGGATACAAAAAA             CCGGAGC AGCT GCTCCGG              TTTTTTTATGGCTTG 100 53
C2U40_RS15935 NONE
C2U40_RS15940 3477430 .. 3477461 +   -26  -2.52464   CCTTTCGCAATGACA      GAGCGCCCCTTGCC GATT GGCAAGGGGCGCTC       TGCGTTGGGCGGACC 100 50
C2U40_RS15955 3481262 .. 3481273 +  -3.6  -4.80289   CGACTTACGTTACGC                GGTC GGGT GGCC                 TTTTATATGTTTTAT  73 313
C2U40_RS16005 3492494 .. 3492510 +    -3  -3.05463   TAATTAGACCCTTTT              GATGGA TAAAT TTCATC              TTCGATAAAAAAAAT  43 469
C2U40_RS16040 3500278 .. 3500288 +  -5.4  -2.74443   CTACAAAAAGGTGGG                 TGTC CCA GACA                 ATTGATTCTTGTCAA  48 77
C2U40_RS16070 3515577 .. 3515596 + -16.4  -4.44797   CCGGCACATAAAAAA            CGCCCCGG CATG CCGGGGCG             TTTTGCTATTCATGC 100 48
C2U40_RS16165 NONE
C2U40_RS16170 3534545 .. 3534561 +  -2.2  -3.14132   CATGGATTACGCTCA              ACCATC CTCGT GATGGA              TTCCTGAGCAGCACA  43 13
C2U40_RS16175 3535104 .. 3535136 + -16.5  -3.32844   CCTGACAAAGAATAA      TAAAGAAAACCCCGA TTA TCGGGGCTTTCTTTA      TTCTCGCGTCAACGC 100 26
C2U40_RS16235 NONE
C2U40_RS16240 NONE
C2U40_RS16245 NONE
C2U40_RS16250 NONE
C2U40_RS16255 NONE
C2U40_RS16260 NONE
C2U40_RS16265 NONE
C2U40_RS16270 NONE
C2U40_RS16275 3551173 .. 3551213 + -17.6  -3.32844   CCCTTGATAAAGAGT  GAGGTGGTCAGGCTGGTC CCTCC GGCCAGTCTGACCGCCCC  TTGTCCAGTACCGCC 100 24
C2U40_RS16280 3551863 .. 3551880 + -14.1   -4.4078   TTCGAAGTGAATAAA             GGCCCGC AATC GCGGGCC              TTTTCATTAGCCAAA 100 50
C2U40_RS16285 3552283 .. 3552308 + -16.3  -3.53012   ATTTCCCGTCAATAA         GAAAAGGCCCT CGTG AGGGCCTTTTC          TTTGAGCACACCAGA 100 26
C2U40_RS16295 3552963 .. 3553006 + -12.7   -5.1523   CAAAATTGTAAGTGT GGCAGATGAAACAAGGCCCGC TATT GCGGGCCTTGTTT-AT-TGCG TTTTTGTCTTATCGG 100 30
C2U40_RS16395 3562670 .. 3562684 + -11.4  -3.94344   ATGGTGTAGCAGAAG               TGGGGC TCG GCCCCA               TTATCTTTATCTGAT  90 92
        pheA 3569562 .. 3569581 +   -15  -4.92783   ACCGCCAATGAAAAA            GGCGACCC TACG GGGTCGCC             TTTTTGTCGTCCATT 100 76
C2U40_RS16450 3572048 .. 3572058 +  -3.2  -3.54475   TCAAGGGTTTAAAAG                 GGAG CGG CTTC                 TTGTATAATGCCCGC  49 44
C2U40_RS16455 3572160 .. 3572202 + -13.5  -4.62336   TCGGGAGCGCCATAT AAAACAAGGGGTTGGCATC ATCAC GATGCCAACCCCTTGGTCG TTTTTGGCCTGGGGT 100 29
C2U40_RS16460 3573359 .. 3573385 +  -4.4  -3.89346   CGAACTCACCCGGAC        TGGCGTAAGCC AATCCG GGCGT-CGCCA         TTTATGCCGTCAACA  60 68
C2U40_RS16465 NONE
C2U40_RS16470 3575434 .. 3575459 + -11.2  -4.15698   TGCTACCCATCACGA         CGGGACGTTT ATCACA AAGCGTCCCG          TTATTTCTCTCCATC  91 94
C2U40_RS16475 NONE
C2U40_RS16480 NONE
C2U40_RS16485 3577208 .. 3577232 + -17.2  -4.98531   AAAAACAAAGCCAAA          GGGCGTCACC ATCAC GGTGACGCCC          TTTTTCATTTCCAAC 100 51
C2U40_RS16495 NONE
C2U40_RS16500 NONE
C2U40_RS16505 3584237 .. 3584252 +    -4  -2.82987   CGACCTGGATATGGA              TTAAGC CAAT GCTTGA               TCTGCTGAATCTTCC  43 22
C2U40_RS16510 3585891 .. 3585901 +  -4.6  -3.37354   ATTGTTAGCCCCCCT                 TGCC GTG GGCG                 TTGTCGCTGCCTATG  51 403
C2U40_RS16520 NONE
C2U40_RS16525 NONE
C2U40_RS16530 3587126 .. 3587140 +  -4.2  -3.06133   ACAGCCAACCAAGCA               TGCGGT CAC ACCCCA               TTCAGTAACCAATTA  46 43
C2U40_RS16535 3588122 .. 3588142 +  -8.1  -2.87931   TATGCAGCTTTAGCC            AGGCCGCCG TAG CGGAGGCCA            TGTGTGCCCACTCAG  58 430
C2U40_RS16540 3588666 .. 3588676 +  -3.2    -3.767   GTTCGATGTAGGCAT                 TCTG CTG CGGA                 TTTCCTGGCTGGATA  54 211
        ppk2 3614139 .. 3614164 + -15.5  -2.67902   CCTTCTAGACAGCGG         CAGGGGTGAGT CTGT GCTCACCCCTG          ATTCTGCTGGTATTG  95 33
C2U40_RS16640 3617174 .. 3617202 + -21.1  -4.80178   ACACTTTATGCCCAG        GGAGGGCCGGTCT GCT AGACTGGCCCTCC        TTTTGTTCATTCATC 100 118
C2U40_RS16645 3618148 .. 3618171 + -14.6  -2.78384   CAGTCCCCCTCGACA          GTCAGTCCGG GCCG CCGGGCTGAC           TGTCATAAAAGCGCC  90 43
C2U40_RS16650 3620221 .. 3620240 + -10.7  -4.74406   GCGTCCCCTACCCGG            CCCCTGC CATCGC GCAGGGG             TTTATCTTTTTTTGT 100 59
C2U40_RS16655 3622157 .. 3622184 + -15.6  -5.31275   AGGTGGTTGAAGTTA        GCAAACCGGGCC GATT GGCCCGGTTTTC         TTTTTTCTGATCAGC 100 43
C2U40_RS16660 3623135 .. 3623156 + -11.6  -3.86202   TAGCCTGCTGCAAGG           GGCGACGA CGAGCA TCGTCGCC            TTTCGTCTCATCCCC  90 75
C2U40_RS16670 3624544 .. 3624578 + -12.7  -4.03234   CAGGCCCGCCAGTAG     GGCGCAGGCGGGGCC ACATC GGCCCCGTCAGGGTC     TTTATGTGGGAGGGC  95 26
C2U40_RS16675 3624999 .. 3625015 +  -5.7  -2.94099   GGCCGCTCATTCCAC              CTGCGGG GAG CCTGCCG              TGTCTCATAACGACG  49 163
        smrA NONE
C2U40_RS16685 3627238 .. 3627255 + -14.1  -4.77036   CCAGCAGATAACAAA             CGGGGCC TCGC GGCCCCG              TTTTTCATGGTAACG 100 55
C2U40_RS16695 NONE
C2U40_RS16700 NONE
C2U40_RS16705 3630474 .. 3630487 +  -3.7  -3.06796   CTCTGTATCATCGTT               AGGCG GAGT CGCCC                TTGAATCAAGTAAAA  46 151
C2U40_RS16710 3630956 .. 3630999 + -13.5  -3.66654   TATCTTGTTAAAAGA GAACCATATTTATGGTTGG TGTGAC CCAATCATAAATATGATTC TTTGAGATTAGCCTC  93 95
C2U40_RS16735 3637408 .. 3637427 + -13.6  -5.06414   CACATACAGCACCAA            GAGCCTGC CAAT GCAGGCTC             TTTTTATTGCCGCGC 100 46
C2U40_RS16740 NONE
C2U40_RS16745 NONE
C2U40_RS16750 NONE
C2U40_RS16755 NONE
C2U40_RS16760 NONE
C2U40_RS16765 NONE
C2U40_RS16770 3646667 .. 3646680 +  -3.1  -3.60234   CTCACCCGCATCCCG               CTCACC GCA GG-GAG               TTTGCGCGTGTATCA  51 61
C2U40_RS16775 NONE
C2U40_RS16780 NONE
C2U40_RS16785 3649075 .. 3649095 +   -14  -4.55287   TAAGATGAGACGACA            CAGCCCGG CATGA CCGGGCTG            TTTTCTGTCAATGCG 100 56
C2U40_RS16795 NONE
C2U40_RS16800 NONE
C2U40_RS16805 3651001 .. 3651017 + -10.8   -4.4267   CATCATTCAAGAAAA              CCCGGC CCAGT GCCGGG              TTTTCGCTTTTCACG  93 39
C2U40_RS16820 3655749 .. 3655773 +  -2.1  -2.60711   ACTTGCTGAGAATAA          TTTCTTGACGC CAT GTTTCAAGGGA          ATCTCTTCTTTGGAT  38 207
C2U40_RS16845 3661529 .. 3661541 +  -6.2  -5.00616   CCCCCCTCTCTCGCT                GGGC CTGAC GCCC                TTTTTTGACCGCCGA  83 18
C2U40_RS16850 NONE
C2U40_RS16855 3663531 .. 3663547 + -15.1   -4.7416   CGACACATAAAAAAA              GCCCCGC TAT GCGGGGC              TTTTTGACGTTTTGC 100 178
C2U40_RS16880 3667504 .. 3667531 +   -12  -4.70879   TCCCTGCGATGACAA        ACAAAGGCGGCC TGCG GGCCGTCTTTGC         TTTTTGGCATTTCCA 100 49
C2U40_RS16885 3669286 .. 3669301 +  -3.3  -4.29106   GCTCTGCCAAATAGA              GCAAA CGTTTA TTTGC               TTTATTAATGTGCAG  60 111
C2U40_RS16890 3671294 .. 3671311 + -14.1  -4.86001   CACAAGCTGTTGCAA             CGGCGCC TGAG GGCGCCG              TTTTTATGGCATACT 100 48
C2U40_RS16895 3671720 .. 3671748 +  -8.7  -2.62642   AGGCCGACAAACCTT        TGCCCGGGATCTG CTT CACAGCCCGGGCC        CTTGTGGCTGGTCAT  59 46
C2U40_RS16900 3672193 .. 3672216 +  -8.8  -3.29144   GCGAACATGACTCAA          GGGGCACTCTG TGA CGGGG-GCCCC          TTGTACAAACAATGG  65 57
C2U40_RS16905 3673164 .. 3673193 + -16.3  -2.91276   CAACCGCCACAAACG       CAGCGGGGCGGCC CATT GGCCGCCCCGCAC        ATTTATCCCGGGGAA 100 45
C2U40_RS16925 NONE
C2U40_RS16930 3678441 .. 3678466 +  -9.8  -5.65177   CAGGCTGTGTAAGAA         TCCGAAACTC CTTGTT GGGTTTCGGA          TTTTTTTATGCGTAT 100 112
C2U40_RS16935 3679819 .. 3679829 +  -2.4   -5.9873   TGACTGGCATTAGCG                 CCAG GCG CGGG                 TTTTTTTTATCATCG 100 42
C2U40_RS16950 3681654 .. 3681666 +  -6.9  -3.14132   ATGAGTCCAGTTTTG                CGGCC AAT GGTCG                TTAATAACCACAAGG  57 106
C2U40_RS16955 NONE
C2U40_RS16960 3684182 .. 3684218 +  -5.1  -3.44051   GGTCAGCGGATCCCG   CTTGGCCATGGCATCG AGCTGG CGG-GCCAGGGTCAGG    TTCTCGTGCTCACGG  53 502
C2U40_RS16970 3685282 .. 3685307 + -20.5  -5.18726   TTCAGAAAATAAAAA         TGGCCCTCCGC ACTG GCGGAGGGCCA          TTTTTATTGTGAGCA 100 134
C2U40_RS16980 NONE
C2U40_RS16985 NONE
C2U40_RS16990 NONE
C2U40_RS16995 NONE
C2U40_RS17000 NONE
C2U40_RS17005 NONE
C2U40_RS17010 3694696 .. 3694713 + -12.7   -5.1287   CTTTGCTTGTCGCAA             GGGCTGC CACG GCAGCCC              TTTTTTGCGTCTGCG 100 48
C2U40_RS17015 NONE
C2U40_RS17020 3696281 .. 3696301 + -10.4  -3.40522   CCCCAATACGCAAAA            CGGCCTGT ATTGA GCAGGCCG            TTGTCATCACACCAT  72 42
C2U40_RS17035 3698066 .. 3698081 + -10.4  -4.49981   TCGCCGGATAAAAAA              GGCTGC CACG GCAGCC               TTTTCTGATCGTCTC  93 69
C2U40_RS17040 3698972 .. 3698985 +  -9.5   -5.4505   CACCCCATGAAAAAA               GGCCC TGAC GGGCC                TTTTTTATTGCGCGG 100 48
C2U40_RS17065 NONE
C2U40_RS17070 3711019 .. 3711036 + -12.7  -4.30416   ATCACCATGCAACAA             GGGGAGC CGAG GCTCCCC              TTTTCCGTTGCTGAT 100 48
C2U40_RS17080 3712724 .. 3712734 +  -6.8  -2.71681   TCTTGATGTTGTTGT                 TGCC CTT GGCA                 TCCTTGCCCACCTTG  49 224
C2U40_RS17090 NONE
C2U40_RS17095 3716351 .. 3716367 +  -2.1   -3.2614   CTGCTCGGCGCCACC              CAACCCG AGC CGGCATG              TTAATCTGCCCGCTC  43 5
C2U40_RS17100 3716833 .. 3716864 + -17.4  -2.91255   GAAAACCGTCCATAA      AAAAACGGGCAGCC CCAG GGCTGCCCGTTTTG       TCATCTTTGTGATCG 100 43
C2U40_RS17115 NONE
C2U40_RS17120 3719992 .. 3720002 +  -6.8  -3.61404   CGGACGCTTTAACCG                 GAGG ACT CCTC                 TTGTCTGCTTCATCG  63 29
C2U40_RS17125 3720821 .. 3720842 + -15.9  -4.41348   TGCGGTAGATAGCAA           CAGAGCGCC ATCA GGCGCTCTG            TTTGTTTGCAAGGCG 100 55
C2U40_RS17135 3723121 .. 3723151 +  -3.1  -3.28712   TAGGCAAGGCCGAGC       CAGAGCGGCAGCG ACACC TGCTGCCAGTCGG       TTGTCAGCAGCCGCG  46 281
C2U40_RS17160 NONE
C2U40_RS17165 3728428 .. 3728450 + -10.5  -2.60685   TATCACCTCGACGTC           TGAGGGGCC AGCAA GGCCCCTCC           CTTCCTCTCTCCTTG  69 23
C2U40_RS17175 3729961 .. 3729972 +  -4.4  -2.79327   CACACCCGCATTTGC                GCAA TCGT TTGC                 CTTTCGGTAGGATCC  46 76
C2U40_RS17180 3731035 .. 3731057 + -15.6  -4.73613   GCCTGACATGCCAGA           GAGGCCGCCA CTA TGGCGGCTTC           TTTTCTTGGTCATCC 100 205
C2U40_RS17200 3734322 .. 3734339 + -12.7  -4.30987   CGGCACATGCCACAA             GGGGAGC GCAG GCTCCCC              TTTCTTGTGCCCGAT 100 181
C2U40_RS17205 3734756 .. 3734773 +  -9.9   -5.4505   TCTCTGCTCCAAAAA             GGTTCTC CGAC GAGAACC              TTTTTTGTTGGCGAA 100 50
C2U40_RS17210 3736375 .. 3736393 + -14.6  -5.28176   CAGCGCAAACAAAAA             TGCCCGTC AAC GACGGGCA             TTTTTTATGGCTGAC 100 58
C2U40_RS17230 NONE
C2U40_RS17235 3742871 .. 3742890 +  -6.4  -2.62983   CCAGATCGAAGGCGC            CGGCAGCT GATG AGTTGTCG             TCGTCTCGCCATCAC  50 16
        pdxA NONE
C2U40_RS17245 NONE
C2U40_RS17250 NONE
C2U40_RS17255 3746087 .. 3746109 +   -22   -5.4111   GGCTGCAAAACAAAA           CGGGCCCGGC ATT GCCGGGCCCG           TTTTTTATGGTTCTT 100 225
C2U40_RS17260 3747624 .. 3747644 +  -6.8  -2.82516   CAAACAGCCCGCAAA            TCACCAGC AGGTA GCTGGCGA            TGTGGTAATAGAAAC  49 234
C2U40_RS17275 3752367 .. 3752396 +  -5.7  -3.51934   AACGGTGCCCCTATA       GCGAAGGGGGAG CAATAGA CTCCCCC-TCAC       TCTTTATCACACCAC  56 97
C2U40_RS17280 3752791 .. 3752823 + -10.6  -2.87443   TGATCCGCGCCTCAC     GGCCGGCACGGGA AACCCGAA TCCTG-GCCGGCC      CTTCTCTTGTCTCAC  71 38
C2U40_RS17285 3753216 .. 3753229 +  -9.5   -4.3208   GACGCTGACGAAAAA               GGGCC CGCA GGCCC                TTTTCCATTGTCACC  86 33
C2U40_RS17315 3760090 .. 3760119 + -16.7  -3.28712   CCAGTCGCCGGACAA       TAAAAAAGAGGCC AAAG GGCCTCTTTTTTA        TTGTCCGGCAAACAC 100 43
        queG NONE
C2U40_RS17375 3773087 .. 3773109 + -20.6  -4.17048   CGTGAACAAACAGCA           GAGGCCCGGC ATT GCCGGGCCTC           TTGTTTTCACCACCC 100 47
        metN NONE
C2U40_RS17390 NONE
        metQ 3776610 .. 3776628 +   -16  -6.15828   TCACTCGGCAAAAAA             GGCCACGC AAT GCGTGGCC             TTTTTTTTTGCTGCC 100 45
C2U40_RS17400 3777251 .. 3777277 + -20.9   -4.2679   GAGGCAAAAAAAAAA         CGGGGCAGGCC CAAGC GGCCTGCCCCG         TTTTCATGGCCCTTG 100 89
C2U40_RS17435 3790378 .. 3790406 + -14.5  -2.76162   CGACCCGCATCAACA        AACGAGGCCACCC CAT GGGTGGCCTCGCC        ATTTGCAATGGCCTG  90 44
C2U40_RS17460 3794090 .. 3794110 + -16.1  -3.20723   GCACGGCAACAAAAA            CGGGCCCCG TGA TGGGGCCCG            TTCCATTGCTGCCAG 100 66
C2U40_RS17480 NONE
C2U40_RS17485 3798700 .. 3798719 +   -15  -5.46657   CTGCCGATATGGAAA            GGGCCTGC AAGT GCAGGCCC             TTTTTTATTCGCATG 100 57
C2U40_RS17490 3799591 .. 3799606 + -11.8  -3.15861   GATAGGCATGAAAAA              GGCGCC GCGA GGCGCC               TTGGTCCGAGTCATG  77 39
C2U40_RS17500 3801595 .. 3801612 + -14.1  -4.30576   TTCGCTGTAGAGCAA             GGCCGCC CAAG GGCGGCC              TTTTCCTGATCCCAA 100 42
C2U40_RS17505 3803829 .. 3803844 + -11.8  -5.64274   ATCCCTGCTGAAAAA              CCCGCC GCAA GGCGGG               TTTTTTTATGGCTGA 100 53
C2U40_RS17545 NONE
        leuB NONE
        leuC NONE
        leuD 3814592 .. 3814611 + -13.6  -4.77165   AACGAGTAGAATCAA            CAGGGAGC CGCG GCTCCCTG             TTTTATTGTCAGGCC 100 58
C2U40_RS17565 3815777 .. 3815802 +    -9  -3.99374   CCCGGATGATGCGGG         CCTGC-GCCTC GAAGG GGGGCAGCAGG         TTGTTGTTGGTGGCC  76 197
C2U40_RS17575 NONE
        thiP NONE
        thiQ 3819623 .. 3819644 + -15.9  -4.25283   CGCGAGGATCAAAAA           GGGGAAGCC AATC GGCTTCCCC            TTTTAATGCAAACAT 100 58
        hemL 3834814 .. 3834830 + -10.8  -4.87893   CCGCGTGTCGCAAAA              GGGCCC TTCAC GGGCCC              TTTTTCATTGCCGTT 100 45
C2U40_RS17650 NONE
C2U40_RS17670 3839818 .. 3839846 + -21.9  -3.66378   GCAGGCAGCCGGAAA        CAACAAAGGGGCC AGT GGCCCCTTTGTTG        TTTCCGTCCGGTGTC 100 59
C2U40_RS17685 3843038 .. 3843051 +  -2.3  -2.53894   TGGCGCTGCCAAGGA               GGCTG TATG CACCC                GTTGATCATCGTACT  38 7
C2U40_RS17690 3843393 .. 3843426 + -16.7  -4.83615   CACTGCACACCATGC     AAAGAAGCCGCCCGG CTAA CCGGGCGGCTTCTGC      TTTTTATGGGCGATG 100 54
        thpR NONE
C2U40_RS17715 3850483 .. 3850497 +  -7.1  -2.52464   CTCAATTTATGGATG               GCACG GGTAG CGTGC               TGAATTAGGAGACAG  52 112
        dksA 3850993 .. 3851010 +  -9.1   -5.4756   GCATAGCAGAAAAAA             GGGAGCT CGCG GGCTCCC              TTTTTTATTGAGCTT 100 53
C2U40_RS17725 3852023 .. 3852041 +  -5.2   -3.5393   GGGATTTGGGTGGAA             TCAGCGCG GTT TGCGATGA             TTTAGCCGGGATAAT  56 52
        pcnB 3853636 .. 3853664 +  -2.4  -3.34522   CGGCCGAGTGACAAC       TGACG-TGATGAC CGAG GTCTTCATCGCCA        TTGGTTCCAACCTGT  45 30
        folK NONE
        panB 3854954 .. 3854988 + -12.1  -2.83164   ACTGATCCGATAGCG    TGACGAGAGCGGGGGC CTGC GCCCCCGCT-TCGCCC     TCTGGTGCTGACTGA  77 36
C2U40_RS17745 3856005 .. 3856034 + -20.9  -3.91072   CCGCTGCGCCACTGA       CAACAAAGCCCGC ATGT GCGGGCTTTGTTG        TTTCTGAGCGTTTCC 100 42
C2U40_RS17790 3862666 .. 3862695 + -19.3  -4.99645   CTCCGTCAAAATAAA       GCGGCGCCGAACT GTTC AGGTCGGCGCCGC        TTTTGTTTGTCCGCT 100 45
C2U40_RS17805 3865419 .. 3865454 + -15.6  -3.61398   AAATAAGCGTATCTC    TCGTGAAAAAGGCGCC TCAG GGCGCCTTTTTTATGG     TTCTTCGCGCAAGCG 100 35
C2U40_RS17810 NONE
C2U40_RS17820 NONE
C2U40_RS17825 3868163 .. 3868179 +    -3  -3.50877   CCAGACTCCTCAAAC              CAGTTG ATAAG CAATTG              ATTTTTATCGACTGC  49 79
C2U40_RS17830 3868921 .. 3868939 + -13.8  -3.74251   CTAAGTCAGAGAGAA             GGGGCGCT GAT GGCGCCCC             TTTGATAGGGGTCTA 100 37
C2U40_RS17835 NONE
C2U40_RS17840 3869865 .. 3869881 +  -2.2  -2.73364   AAACTGAGCTGGTAA              CGCCAT GAAAA ATGCCG              TGGTTGAGATCCGCG  39 26
C2U40_RS17845 NONE
C2U40_RS17850 NONE
C2U40_RS17855 3872403 .. 3872422 +   -15  -4.77165   GTAACCAGGCACACA            CGGCCTCC CGCG GGAGGCCG             TTTTGTTATCCGCGA 100 37
C2U40_RS17860 3873403 .. 3873423 + -14.7  -2.90496   TGCTCCCTGATCCCC            TGGAGCCCG CCC CGGGCTCCG            TCGTTTCACGCACCG  90 31
C2U40_RS17865 3875319 .. 3875347 + -14.6  -3.14149   CTAACAACAAAAAAA       GGGCCC-CTGTCG TCAC CGGCAGTGGGCCC        ATTTATCTCTTGTGG  95 56
C2U40_RS17870 NONE
C2U40_RS17875 3877438 .. 3877451 +  -2.4  -3.36515   TGCCTGGAGTAGAAA               TGGA CAACAT TCCA                TATTTGGCAATGGAA  45 52
C2U40_RS17880 3878374 .. 3878389 + -11.8  -5.30686   ATTCCATATAAAAAA              GGGGGC AAAC GCCCCC               TTTTTTATCAATATT 100 87
C2U40_RS17910 3885877 .. 3885898 +  -2.2  -3.02144   GTTCAAGGATGGCAA           GGGC-GGCA AGTCA TGACAGCCC           TGTTCGAGGGGCTGA  42 10
C2U40_RS17915 3886381 .. 3886396 + -10.4  -4.28375   ACCGCCAACGACAAA              GGGCTC CTCA GAGCCC               TTTTCGCTGTCTTGC  85 62
C2U40_RS17925 NONE
C2U40_RS17930 NONE
C2U40_RS17935 3890248 .. 3890267 +   -15  -5.15167   CTCGCACACCACCAA            GGGCCTGC CACT GCAGGCCC             TTTTTATTGGTCATG 100 53
C2U40_RS17945 3891972 .. 3891986 + -12.8  -4.65895   CGCGCAAATAAAAAA               GCCCCG TCA CGGGGC               TTTTTCCATGCAGGC 100 88
C2U40_RS17955 3892747 .. 3892799 + -10.4  -3.48276   GCGCGCCCGCCAGCA GCTGGCACTGGCCTGAGGGAGGGGC TGCG GCCCTTCCC-CACGCCTGAACAAGC TTCTCTCCCCCGGCA  74 10
C2U40_RS17960 NONE
C2U40_RS17965 NONE
C2U40_RS17980 3897518 .. 3897546 + -16.1  -3.30243   CCAACTAAGTGCCAT        AAAAAAGCCCCGC GAT GCGGGGCTTTTTG        TTATCGACAGTAACT 100 96
C2U40_RS18030 NONE
C2U40_RS18035 3911287 .. 3911338 +  -8.4  -2.52464   ACTGCCCCTTCTCGG CCAAAGGGCCCGGTCTGCAGTAGG CCCG CCGCCGGCCGACCTGCCCCTATGG TCAGTTGAAAGGGAC  58 3
C2U40_RS18040 NONE
C2U40_RS18045 3914195 .. 3914208 +  -3.8  -3.64703   CCCCAGGCTGGCGTC               GAGC GTGGTA GCTC                TTTGACTCCGGCAAC  53 62
C2U40_RS18050 NONE
C2U40_RS18060 3918470 .. 3918520 +  -5.4  -3.53012   CCAGCAGCCCATCAC CAGGGTACGCCAGTGCAGC-GCCAGC CCG GCGGGCAGC-GC-CTGACG-ACCCAG TTTCCAACCCAGCAG  53 95
C2U40_RS18075 3921552 .. 3921568 + -11.5  -3.42581   CTGACCAACAAAAAA              GGGGCCG ACA TGGCCCC              TTCCTGTTGCTGTTT  82 37
C2U40_RS18090 3924734 .. 3924761 + -12.1  -3.17075   AAACGCCAGAAACAA        CAAAGCAGGCG CCGGGA TGCCTGCTTTG         TTGCCTTCGGGGAGG  81 46
C2U40_RS18095 3925535 .. 3925561 +   -21  -4.54047   CCAGACCAGATAAAA         GAAGAGGAGGCC ACT GGCCTCCTCTTC         TTTTATCTGCAGTCA 100 62
C2U40_RS18115 NONE
C2U40_RS18120 3928457 .. 3928484 +   -12  -5.31275   AGACTGCTTGCATGA        CGGGCCCATC CGCCCTAA GGTGGGCCCG         TTTTTTATGGTGCAA 100 67
C2U40_RS18125 NONE
C2U40_RS18130 3930398 .. 3930423 + -17.5  -4.67353   GCGGCCACAAAGAAA         CGGCCCCCTGC CAAG GCTGGGGGCCG          TTTTTGCATGCATGC 100 53
         gap 3938857 .. 3938885 + -16.1  -3.21924   GCAATCAAGTAGCTT        GAAAAAGGCGGCC ATT GGCCGCCTTTTTG        TATTCTGGACCATGG 100 51
C2U40_RS18160 3939839 .. 3939860 + -15.9  -3.77177   GTTCAGATAAATAAA           GAGGGCTCC CACG GGAGCCCTC            TTTGCATCTCTTCAT 100 51
C2U40_RS18170 3943225 .. 3943242 + -12.7   -4.7173   ACGGCCATAAAAAAA             GCCCGCA TTGC TGCGGGC              TTTTTCAATCTGGTG 100 47
C2U40_RS18310 3958513 .. 3958531 + -17.4  -3.89346   TCGGGTCTGACCAAC             GCGGGGGC TAT GCCCCCGC             TTTCTCCCGTCGCAC 100 31
C2U40_RS18315 3960388 .. 3960417 + -15.1  -4.36914   CCCCCTAGCCACCAT       AAAAAAGCGCGCC ATTA GGCGCGCTTTTTG        TTTTCTGCCGCAGGG 100 46
C2U40_RS18335 3963576 .. 3963588 +  -6.9  -4.11216   GGTGCCGAGCGCGCC                CGCGC CCA GTGCG                TTTTCAGCCTCCAGC  69 401
C2U40_RS18345 3964593 .. 3964616 + -15.2  -3.09908   CAGCCATCATGACGA          AGCGGGGGGC ATTG GCCCCCCGCA           GTTGTTTTGGCAGCG  95 29
C2U40_RS18355 NONE
C2U40_RS18360 3967555 .. 3967576 + -15.9  -4.84359   GCCGTCATGAAAAAA           GCCCCGAAC CTGC GTTCGGGGC            TTTTTCTGGGCATGA 100 31
C2U40_RS18390 NONE
C2U40_RS18395 NONE
C2U40_RS18400 3973605 .. 3973624 + -13.6  -5.86976   AAGCACTTTTTATTG            GCCGACGT TTAT ACGTCGGC             TTTTTTCTTTTCTGG 100 102
C2U40_RS18410 NONE
        brnQ 3977289 .. 3977309 + -12.6  -5.05113   CCCGCCCATCTCAAA            GAGCCTGC CTTGC GCAGGCTC            TTTTGTTTGTCTGCC 100 48
        brnQ 3978960 .. 3978981 + -15.9  -3.20432   GGCGACCAACGACAA           GAGGCCAGC ATCA GCTGGCCTC            TTGCATTGCATCTGT 100 48
C2U40_RS18440 NONE
C2U40_RS18445 3981459 .. 3981481 + -17.8  -5.62045   GACCTATAAAAAAAA           CCGGCAACAC CCA GTGTTGCCGG           TTTTTTATTGTCTCT 100 55
C2U40_RS18460 NONE
C2U40_RS18465 3983627 .. 3983656 + -18.1  -3.07816   GCAGTACATTCAATG       TAAAAAGGAGCGC CGTT GCGCTCCTTTTTA        TTGCCTGCCTGCGGC 100 41
C2U40_RS18475 3987576 .. 3987602 + -23.8    -4.258   GGGCAGGCAATAAAA         CCATGGCGGGCC TCT GGCCCGCCATGG         TTTGTTCATCCATCA 100 75
C2U40_RS18490 3990395 .. 3990408 +  -3.8  -2.90392   AACTGGCAATGCCAC               CAGC AGGAGC GCTG                TATGATTGCCCCCTC  45 64
C2U40_RS18495 3992680 .. 3992699 + -16.4   -3.6216   CCTTGAAATGCAAAA            CGGCGGCC CGAA GGCCGCCG             TTGTCATTATTCATG 100 49
C2U40_RS18535 4000829 .. 4000846 + -11.3  -4.82901   ACAGGTATAAAAAAA             CGACTCC ATTT GGAGTCG              TTTTTATCAGAGCCA 100 277
C2U40_RS18570 4007684 .. 4007706 +  -2.7  -2.59475   CCCCACCGCTGATGC          CCA-TCGCCA AGTT TGCCGAGTGG           ATTGGTATCTCAGTC  40 137
C2U40_RS18575 NONE
C2U40_RS18580 NONE
C2U40_RS18585 NONE
C2U40_RS18590 4009548 .. 4009564 +  -2.1  -3.06183   GACCTCTGGCTTTAT              CCGCATC ATC GAGGGGG              TTGCATGAGCATCGA  42 177
C2U40_RS18595 NONE
C2U40_RS18600 NONE
C2U40_RS18605 NONE
C2U40_RS18610 4010872 .. 4010904 +  -4.9  -4.18401   GACCAACCAGAACAA     CAAAG--GGCCAGCC GCCGA GGCTGGCCAACTTGG     TTTTGCCATCTCTCG  64 39
C2U40_RS18615 4013230 .. 4013243 +  -4.5  -3.30474   GCAGAAATAACCAAC               GAGCC CATC GGTTC                TTGCTGGTTATGGCA  51 67
C2U40_RS18620 NONE
C2U40_RS18625 NONE
C2U40_RS18630 NONE
C2U40_RS18635 NONE
C2U40_RS18640 4015245 .. 4015264 +  -8.6  -4.92791   TCACAACACTCCAAA            GGG-GCGAT ACT ATCGCTCCC            TTTTGTTGTCTTATA  93 67
C2U40_RS18645 NONE
C2U40_RS18650 4016404 .. 4016416 +  -6.3  -3.86346   ACTATTTTGCCACAT                CAAAC ACT GTTTG                TTTATACAGCAGTGC  65 349
C2U40_RS18675 4021047 .. 4021058 +  -4.4  -3.05384   ACCACCTATCAAATT                TGCT AAGG AGCA                 TTCAGTGAGCCAAAC  48 20
C2U40_RS18680 NONE
C2U40_RS18685 NONE
C2U40_RS18690 4023456 .. 4023468 +  -6.9  -2.65264   AAGGGCAAGCACAGG                GCGGG GGT CTCGC                TGATATGAATAGTGA  52 5
C2U40_RS18695 NONE
C2U40_RS18700 NONE
C2U40_RS18705 NONE
C2U40_RS18710 NONE
C2U40_RS18715 NONE
C2U40_RS18720 NONE
C2U40_RS18725 NONE
C2U40_RS18730 4027736 .. 4027755 +  -6.4  -3.86015   AATTCACGGGGAGCA            CC-TACGGC GAC GCCGTGCGG            TTTATCCCCACCCTG  65 40
C2U40_RS18735 NONE
C2U40_RS18740 NONE
C2U40_RS18745 NONE
C2U40_RS18750 NONE
C2U40_RS18755 NONE
C2U40_RS18760 NONE
C2U40_RS18765 NONE
C2U40_RS18770 NONE
C2U40_RS18775 NONE
C2U40_RS18780 4037934 .. 4037958 + -20.1  -3.60525   AAGCCACCAAGCAAA          GAAGGCCCCAC ACC GTGGGGCCTTC          TTCTATCTGCCTGAC 100 39
C2U40_RS18790 4039433 .. 4039451 +   -16  -4.72272   AGCAGCAACAAAAAA             GGGCACCC CGA GGGTGCCC             TTTTTGCTGGCCGAC 100 47
C2U40_RS18805 4043531 .. 4043556 + -16.3  -3.91084   CGTTACCCTGAATCA         CAAGGAAGAGG CCCG CCTCTTCCTTG          TTTCATTGAGGGTGG 100 80
C2U40_RS18810 NONE
C2U40_RS18815 4047002 .. 4047017 +  -5.4  -2.86676   AGCAGGCCGAGATCG              CCGCGCT GTA AGC-CGG              ATTTCACTTGGTAGA  49 15
C2U40_RS18820 NONE
C2U40_RS18825 4049188 .. 4049207 + -13.6  -5.47821   TGAGACAAATACACA            GGGCCATC GCAA GATGGCCC             TTTTTTTAGCTAAAT 100 38
C2U40_RS18830 4050166 .. 4050181 +    -9   -5.4505   CACGGGGATGAAAAA              GGATGC TGCG GCATCC               TTTTTTATTGCCCGC 100 49
C2U40_RS18895 4059798 .. 4059827 + -19.3  -5.09259   CCTTTTGTCATTTAT       CGCCCCGGCAGGC TTCG GCTTGTCGGGGCG        TTTTGTTTTGGAGTC 100 103
C2U40_RS18900 NONE
C2U40_RS18905 4061843 .. 4061881 + -22.6  -4.89838   ACTCAACGGCATACA   CGGCTCAAGGTCTCCC CTGATTC GGGAGACCTTGGGCCG   TTTTCTATTTATTGA 100 55
C2U40_RS18910 NONE
C2U40_RS18915 4062977 .. 4063008 + -10.1  -4.52589   CCGCATTCACGACAA      CGCCACCTTCAGT ACTGAC GCCGGAGGTGGCG       TTTTCTATGGAGAAC  93 41
C2U40_RS18920 4063602 .. 4063616 +  -2.8  -3.31144   CAGCCATTAGACAAA               TCAATG CGA CATAGA               TTGTCGCAGTCAGCC  47 101
C2U40_RS18925 4065130 .. 4065156 + -18.2  -3.91897   AAAAATGGCGATTTA         TATAAGGAGCGG CAT CCGCTCCTTATA         TTTCTCCATCAACAC 100 46
C2U40_RS19020 4088242 .. 4088266 + -10.8  -4.20368   TCGTGTGGTGCCCAA          GTGGGCAGAT CTATC ATCTGTCCAC          TTTGTCTTAGGATCC  84 241
        mutS 4092108 .. 4092155 + -16.4  -3.14564   ACCAGCGGCAGCTGA TCAGCCATGAAAAAGGGGAACC GCGA GGTTCCCCTTTTGTTTGGCTGC TTGATGGCGGCCTGA 100 40
C2U40_RS19045 4094961 .. 4094996 + -16.4  -3.16055   TCACCGAGGAGCGGG    CATAAAAAAAGCTCCC GAAC GGGAGCTTTTTTTAGG     TTCATCGCGGCTTTC 100 21
C2U40_RS19060 4098035 .. 4098057 + -20.6  -4.96848   ACCAGCCAACAAAAA           GGCCCCGCCA GAG TGGCGGGGCC           TTTTTGTGTCGGCGA 100 46
C2U40_RS19070 NONE
C2U40_RS19075 4102081 .. 4102097 +  -7.2  -3.27771   GTCGGTTCGCTTGCT              GCCGGG CAGGA TCCGGC              TGTTGATGTTGTCGA  58 194
C2U40_RS19090 NONE
C2U40_RS19095 4105338 .. 4105349 +  -3.6  -3.44146   TAAGCCGATTCAAAC                TCGC CTGA GCGG                 TTCATTCTCGCCGGG  51 122
C2U40_RS19105 4107206 .. 4107231 + -14.7  -4.16842   CTCTCTAACCAGCGA         GGGTCACCCCA GCAG TGGGGCGACCC          TTTGTTGCAGATGGG 100 33
        rarD 4108860 .. 4108884 +  -3.3  -4.07687   CGGCGATGTCATTCA          GCCGGCTGTGC AGT GCGCTGCGGGA          TTTTGGCAACAGGAT  58 84
C2U40_RS19125 4109963 .. 4109974 +  -4.4  -2.70932   GGAGTGTCAACGGCA                GGTT GATT AACC                 TGCTTGCGCCGGCGG  46 16
C2U40_RS19150 4112814 .. 4112837 +  -3.8   -3.0166   TGGCGGGAATGAGTT          CAGCCGCGCTT TTT GAGC-CTGCTG          TCATTCATTTTTTGC  46 29
C2U40_RS19155 NONE
C2U40_RS19160 NONE
C2U40_RS19165 4116218 .. 4116236 + -13.1   -5.0133   GACCCCTGACCTCGA             CGCCCGG CCAGT CCGGGCG             TTTTTTCAACCCCTG 100 39
C2U40_RS19170 NONE
C2U40_RS19175 NONE
C2U40_RS19180 NONE
C2U40_RS19185 4119072 .. 4119095 + -18.2  -2.62616   TTGCCTCTCCTCCCA          CAACGCCCGG CTTG CCGGGCGTTG           TGCTATCCGCCATCC 100 69
C2U40_RS19190 NONE
C2U40_RS19195 4119999 .. 4120024 +  -9.7  -2.87132   ACCTCCCCTCACCCT         GAC-CCTCTCCC ACG GGGAGAGGGGAC         TGTATCGCGCCACCA  68 83
C2U40_RS19255 4134697 .. 4134714 + -12.7  -5.18726   ATCGGCAATGAAAAA             GGCGACC ATCA GGTCGCC              TTTTTGTTATCCGGG 100 49
C2U40_RS19265 4137454 .. 4137467 +  -9.5  -5.26918   AAAAAACCGAAAAAG               CCGCC GAAA GGCGG                TTTTTTCTGGCCTGT 100 46
C2U40_RS19270 4138113 .. 4138129 + -12.3  -4.74103   ACAGCGAAAGAAAAA              GGTGAGC CAT GCTCACC              TTTTTGCATTGCAAG 100 85
C2U40_RS19280 NONE
C2U40_RS19285 4141279 .. 4141299 + -18.3  -5.71712   GTGCTGCAATGAAAA            GCCCGGGTC ATT GACCCGGGC            TTTTTTTATCTCGGC 100 44
        ybaK 4141893 .. 4141916 +    -3  -3.53444   GCGGGCCTGCCACTG          CGCAGGCCCGC CCG GCCAGCCT-CG          TTTACGGGAGCATGC  49 49
C2U40_RS19315 4147049 .. 4147063 +  -7.1  -3.72695   CAGCTCCAGCGCACT               GAGGG CGCCT CCCTC               TTTGGTCGGCAGCAT  62 470
C2U40_RS19325 4148019 .. 4148032 +  -3.7  -2.71268   GAGTTGAAACTGGCC               CGCCG GAGT CGTCG                TCATGTCTGATACCC  43 2
C2U40_RS19330 4148733 .. 4148746 +  -2.3  -2.71712   CTGGTAACCAGTGCG               TCGGT AAAA GCCGG                GTTTCCCGGGCCCAG  39 34
C2U40_RS19335 NONE
C2U40_RS19340 4150722 .. 4150742 + -18.3  -5.28778   CTCCGCAATGAAAAA            GCCCGGGTC AGT GACCCGGGC            TTTTTTGTCCATGCT 100 57
C2U40_RS19350 4153904 .. 4153916 +  -5.5  -2.62616   CATCAACACACTGTC                GGAGG AGG CTTCC                TGATGTCCACCCTGC  47 10
C2U40_RS19355 4154640 .. 4154659 +  -4.9   -4.7497   GGCCATCATTTCAAG            AGGGAGC CTGAGA GCTCCCC             TTTTTAATCAATAAC  75 66
C2U40_RS19360 NONE
C2U40_RS19365 4156202 .. 4156220 +  -8.1  -3.57119   CAACGACGGAAGTGA            C-GGGCGG CCCG CCGCCCAG             TTTGAGGACTCTATG  66 88
C2U40_RS19370 4157351 .. 4157372 + -17.3  -3.70773   AGACCAACAGCAAAA           GGGCGCCTC CATG GAGGCGCCC            TTGTTACGTCTGGCG 100 43
C2U40_RS19380 4159044 .. 4159063 +   -15  -5.18726   CCCACTGATGAAAAA            GGGCCGAC GACA GTCGGCCC             TTTTTGTTGTGCAGC 100 33
C2U40_RS19390 4161157 .. 4161176 +   -15  -3.38683   GCCACGAATAAAAAA            CGGGAGGC CAAG GCCTCCCG             TTCCATTTTGGGTCT 100 60
         hfq 4165321 .. 4165358 +  -3.5  -4.68124   TGTCTGTCCCGTATG   AGAATGGACTCCACTC TTCCTCC GAGTGGA-TCCATCCG   TTTTCTCTCTCTTCC  70 110
C2U40_RS19435 4171133 .. 4171148 + -10.4  -5.47218   TGTCACACCTCAAAC              CACCCC TTTA GGGGTG               TTTTTTTGCATCAAG 100 102
        glgC NONE
C2U40_RS19445 4173914 .. 4173952 +  -6.1  -2.72049   TTGATGCTGCTTTGA   ACGTCAACAGCGAAA AAAGTCCCC TTTGGCTGTTGACGC   TCCTTCAAAACTCTA  51 66
C2U40_RS19450 NONE
C2U40_RS19455 NONE
C2U40_RS19460 NONE
C2U40_RS19465 4174505 .. 4174519 +  -4.2  -3.53224   GTAAAACGCAGAAAA               TGCGCT CCA ACCGCA               TTTAAAAACCAGCTG  51 53
C2U40_RS19470 4174644 .. 4174677 + -22.7  -4.64144   GCACCATTCATTATG     CAAAAGGCCCATCAC GAAA GTGATGGGCCTTTTG      TTTTTAGCCCTTGTT 100 35
C2U40_RS19475 4175242 .. 4175256 +  -5.8  -4.45168   CTCCCCTCCAACAAT               TGATAA CAA TTATCA               TTTGTATTTTAGGAG  74 251
        nhaC 4176953 .. 4176969 + -10.8  -4.52589   AAAACCATGACAAAA              GGCGCC AGCAC GGCGCC              TTTTGTCTGGCCGCG  95 49
C2U40_RS19490 4178096 .. 4178110 +  -5.8  -3.31263   TACGCTCATGACTGG               TTAACA GGA TGTTAA               TTGTCAGCGTGGCAT  56 162
C2U40_RS19495 NONE
C2U40_RS19500 NONE
C2U40_RS19505 NONE
C2U40_RS19510 NONE
C2U40_RS19515 4183686 .. 4183709 + -13.2  -2.61728   GCCTGTGGCAAGCAC          GAGCCCTCCCG AGC CGGGAGG-CTC          ATTCGTCTTAGGAAT  81 73
C2U40_RS19520 4185503 .. 4185531 +  -9.7  -3.16971   GCAAGGCATAACAAA       GTGCAGC-TAGG GAAAAA CCTACGCTGCAC        TTCGGTCTGTCCTAG  70 30
C2U40_RS19530 4186810 .. 4186848 +  -3.8  -4.93316   CAAACGGTCGGAAAC   TGATCGGAGTTTCGGAGT GGA ACTACGATATACCAATCA   TTTTTAATCTTCTTC  76 445
C2U40_RS19540 NONE
C2U40_RS19545 4188416 .. 4188438 +    -4  -3.05715   GCCGTTCACTGGATG           TCGGCGAAAC CGT GCTGCGTCGA           TTGGCTCAGCAACTT  46 395
C2U40_RS19555 NONE
C2U40_RS19560 4190271 .. 4190285 +  -3.5  -4.18762   TCCGGCCATAAACAA               CGTGG CTACA CTACG               TTTTGGCTGCCCATT  62 59
C2U40_RS19585 4195297 .. 4195330 +  -2.3   -3.0263   TCGAGGATGGTGCAG     CCCACGTTGGCGTAGA AGT TCT-CGCCGACGAAGA     TGTTGGCGCCATAGT  41 466
C2U40_RS19610 4201139 .. 4201154 +  -6.8  -2.76492   CATCACCCCTTGACC              TTGCCG CGGG CGGCAG               CTTTACGCTGACTGC  53 192
C2U40_RS19615 4201380 .. 4201394 +  -2.8  -2.93382   CAAGGGCTTCTCAGC               GAGTTA AAT TATCTC               TATATAGGTATAAAA  42 19
C2U40_RS19620 4202622 .. 4202642 +   -14   -4.2535   TGATGACAACAACAA            GGGCGGGA CAAGA TCCCGCCC            TTTTGCATCTGGTAT 100 70
C2U40_RS19630 4204654 .. 4204675 + -17.3  -3.05997   TCCCGCCAATAAAAA           GAGCCGGCC CCTT GGCCGGCTC            TGTCGTTTCTGCCCC 100 48
C2U40_RS19655 NONE
C2U40_RS19660 4211387 .. 4211422 +  -7.4  -3.20858   GCGCGGCCTCGGCGC    CAGCTCGCCGATGCGG GCCA CCACCTCTGCCAGCTG     TTCATCACTGTAATC  56 525
C2U40_RS19670 4212835 .. 4212862 +   -20  -2.79098   CGAACGGCCACTCAA        GCAAAAGGGCGC CGAG GCGCCCTTTTGC         TGCTTGATGGCTCAA 100 47
C2U40_RS19685 4215704 .. 4215716 +  -3.3  -4.15044   TCAGGTAGCACAGCA                GGGTG AGC CAGCC                TTTCTTGAGCCAGCC  61 379
        folB 4218641 .. 4218653 +  -3.4  -2.88544   CCGCGAGCGCCAACT                GATG ACCCG CATC                TATATCAGCCTGGGA  42 24
        folK 4219156 .. 4219179 + -16.8  -3.21099   AGCACCACTGAACAA          CAAGGGCACC TCGC GGTGCCCTTG           TTGCTGATGGACGGA 100 30
C2U40_RS19730 4219750 .. 4219770 + -11.1  -2.57132   AGCTACCTGCCAGCC            CCCTGAGCC TGC GGCTCAGCG            CTTGTCCCGCGCCAG  69 20
C2U40_RS19755 4226034 .. 4226050 +  -2.2   -3.0497   CAGCGCCATGTCGCG              ACAGTG GGCGG CACTGA              TGTTGAAGCTGATGT  41 525
C2U40_RS19775 4234525 .. 4234542 + -14.1  -5.12971   TTCTGACATCATAAG             GGGGCGC TATG GCGCCCC              TTTTTGTTGGCTATT 100 44
C2U40_RS19780 4236321 .. 4236336 + -11.8  -2.87132   TCATGATTCCCCAGA              GGGCGC TGCG GCGCCC               TCTGTCGCCACCACG  75 59
C2U40_RS19785 4236645 .. 4236662 + -12.7   -5.1861   GCTGAAAAACAAAAA             GCCGCTC GATT GAGCGGC              TTTTTTCATGCTGAC 100 54
C2U40_RS19815 NONE
C2U40_RS19820 4246195 .. 4246209 + -12.8  -4.86731   GAAGGACTTGCAAAA               GGCGCC ACG GGCGCC               TTTTCTTTAAGGCAG 100 91
C2U40_RS19830 4246866 .. 4246880 +  -2.8  -2.53876   GTTGGCACCTGTGTT               GCGGAT GGA ATTTGC               TGAGTTAGCATGACC  40 8
        pilB 4248656 .. 4248666 +  -2.4  -4.30576   GGCGATTTCCATCAG                 GCCG AGG CTGC                 TTTTCCTCATGACGA  60 85
C2U40_RS19840 NONE
C2U40_RS19845 NONE
C2U40_RS19850 NONE
C2U40_RS19855 4252236 .. 4252247 +  -4.4  -3.21099   TTCCAGCTTGCCTGC                TGCT GAGG AGCA                 TTCATGGTGACCAAA  49 20
C2U40_RS19860 4252455 .. 4252481 + -19.6  -4.35116   CAATAAGCCAGCAAA         CAAAAAGGGCCG ATA CGGCCCTTTTTG         TTTTGGTATGCACTG 100 35
C2U40_RS19965 4276597 .. 4276614 +  -9.1  -4.05446   CAGAGACCATCAGCC             GC-GCGGC AAT GCCGCAGC             TTTGTGATTCCAAGG  81 293
        flgA 4296473 .. 4296485 +  -9.1  -2.65298   TGATTTAAGTTACAT                CGACC TTG GGTCG                CTTGTCATAGATAGA  62 56
        flgM NONE
C2U40_RS20095 4297271 .. 4297291 +  -6.8  -3.14344   GCGATGCCGCAGACT            GGCCAGCT CATCC AGCTGGCG            TTGATCGCGCGACTC  53 62
C2U40_RS20180 NONE
C2U40_RS20185 NONE
C2U40_RS20190 NONE
C2U40_RS20195 4316059 .. 4316079 +  -3.9   -4.0641   ATATTAATTTTGCCT            CGTTCTGGC CAG GCTACGACG            TTTCTGTCCATAGCC  60 176
C2U40_RS20200 4317248 .. 4317265 + -12.7  -5.68438   ATGAACCTAAAAAAA             CGCAGCC AGCT GGCTGCG              TTTTTTATTTGATGA 100 37
C2U40_RS20245 4324011 .. 4324021 +  -5.4  -3.49687   GTCAGACCTTGACGA                 TTGC ATT GCAA                 CTTTTTCTGGGAGCT  56 72
C2U40_RS20250 4325415 .. 4325440 + -20.5  -4.83169   TCCGTTAACTCCCTC         TCACCCGCGGC CCTC GCCGCGGGTGA          TTTTTATCCACCGAT 100 33
        degS 4326638 .. 4326659 + -17.3  -4.05788   GCCAATATCCTTCGA           CAGGGGCGG TCAA CCGCCCCTG            TTTGCTTTCCACGCA 100 45
C2U40_RS20260 NONE
C2U40_RS20265 NONE
C2U40_RS20270 NONE
C2U40_RS20275 NONE
C2U40_RS20280 NONE
C2U40_RS20285 NONE
C2U40_RS20290 NONE
C2U40_RS20295 4332458 .. 4332493 + -15.4  -3.71848   GCTGGCCTGACAGCC    CTCAGGCACCGGTCCG ATTA CTGACCGGTGCCTGGC     TTGTTAATGACCAGC 100 31
C2U40_RS20300 4334697 .. 4334713 +    -3  -4.91473   AGCATCATGGCCGGT             CT-GGCA TGCA TGCCCAG              TTTGTTTTTCACTTC  75 261
C2U40_RS20355 4342279 .. 4342294 +    -4   -2.9155   CATTTTCCGGCAGGC              GA-CCTG CTA CAGGATC              TCTGATGTTGACAAG  45 5
C2U40_RS20360 NONE
        mlaD NONE
C2U40_RS20370 NONE
C2U40_RS20375 NONE
C2U40_RS20380 NONE
        murA 4346050 .. 4346072 + -20.6   -4.7497   ACGCCGATACAAAAA           GGCCCCTCGC ACT GCGAGGGGCC           TTTTTCATGGCTGCA 100 56
C2U40_RS20395 4348134 .. 4348152 +   -16   -4.3586   CAGTACGAAATAAAA             CGGGGCCA ATA TGGCCCCG             TTTTCGTGTCGCTGC 100 73
C2U40_RS20405 4352743 .. 4352761 +   -16  -4.07687   TAACAAAAAGCAAAA             CACCGGCC TAT GGCCGGTG             TTTTGAGCAGACAGT 100 94
C2U40_RS20440 4361730 .. 4361745 +  -3.9  -3.57039   TGACATGTTCGGTCA              CCCCG GGTTCA TGGGG               TTCTGATTCTCGCTG  53 218
C2U40_RS20450 4363476 .. 4363487 +  -5.8  -3.94877   AATTGCCATTAAGTG                GTGC CGAG GCAC                 TTCTTCTTCCCCGAT  65 111
C2U40_RS20455 4364626 .. 4364646 + -14.1  -5.60993   CGCCATAACAAAAAA            GCCAATGAG CGA CTCATTGGC            TTTTTTTGTACCCGC 100 46
C2U40_RS20500 4378035 .. 4378054 + -11.4  -5.52909   ACGTCAGATCCCGGA            GGCCCTGT TCAT GCAGGGCC             TTTTTTTGCCTGTTA 100 44
C2U40_RS20505 4378962 .. 4378981 + -10.7  -5.14163   CCTGAAAACATAAAA            GCCAGCC CGAAAA GGCTGGC             TTTTTGTTACTGGCT 100 45
C2U40_RS20515 NONE
C2U40_RS20520 4381190 .. 4381205 +  -2.6     -3.81   CAGCGATTAGTATAA              GAATTA TCCA TGATTC               TTCTTATCAAATAAT  51 305
C2U40_RS20525 4381590 .. 4381603 +  -9.5  -5.60689   CAAGAATTGAAAAAA               CCCGC TTCG GCGGG                TTTTTTATTGTCTGC 100 93
C2U40_RS20530 4383885 .. 4383907 + -18.4  -5.63517   ACTTCTGATGTCAGG           CCGCCGCCCG CTC TGGGCGGCGG           TTTTTTATTTCCCCC 100 33
C2U40_RS20550 4387975 .. 4388016 + -18.7   -4.3739   GACCGAACCCCCTTC GTCATGATGTGCGGCCGCC AGGT GGCGGCTGCGCACCCTGAC  TTTTCTGCCGCCATC 100 19
C2U40_RS20555 4388410 .. 4388440 + -16.9  -5.28942   GCCCCAGCCTAAAAA       TACCCCGCCAGCG GACGA CGCTGACGGGGTA       TTTTTATTTCCCGTC 100 45
C2U40_RS20560 4388981 .. 4388998 + -12.7  -5.26875   CTTCGACCCGAAACA             GGGTGGC CTCG GCCACCC              TTTTTTCGTTCCGCC 100 46
C2U40_RS20565 4391202 .. 4391217 + -11.8  -5.14965   ATCAGGCAGCAAAAA              GGGGCC CGCG GGCCCC               TTTTTTCATGCACGT 100 48
C2U40_RS20585 4394528 .. 4394539 +  -4.4  -4.43307   TTGGGGAGCGGTAAC                GAGA TTGA TCTC                 TTATTTTCTTGCAGG  67 145
C2U40_RS20625 4408528 .. 4408538 +  -3.2  -3.68619   ACCTTCCACTCAGAC                 TGGT CTG GCCA                 TTTCCATCGATTACG  51 344
C2U40_RS20630 4409430 .. 4409451 + -15.9   -3.1634   TCGACAACTGATCCC           GGCGGATCC TGCG GGATCCGCC            TTCCCTCCTTTCCAC 100 30
C2U40_RS20645 NONE
C2U40_RS20650 NONE
C2U40_RS20655 NONE
C2U40_RS20660 NONE
C2U40_RS20665 NONE
C2U40_RS20670 4415899 .. 4415922 +   -11  -3.14931   TGGCCTCCTGAATGA          AGAAGAGGCC CTCA GGCCTCTTCC           TTGCTCAGCAGTGCA  74 30
C2U40_RS20680 4418179 .. 4418199 +  -4.7  -3.35597   GAGGCTGGAGTTTTG           CGGCACGG CCCTGC CCGT-CCG            TCTTTCAGGGATGAA  51 134
C2U40_RS20685 4419158 .. 4419178 + -18.3  -4.36914   TGACCCCAAACAAAA            CGAGGCGCC CAG GGCGCCTCG            TTTTATGGCCGCACG 100 66
C2U40_RS20700 4422179 .. 4422198 + -16.4  -3.44051   TCTGCAAAAGCAAAA            CGGGGGCC TGCT GGCCCCCG             TTCTCGTCATAACGG 100 58
C2U40_RS20710 4424198 .. 4424226 +   -14  -4.07885   CTCAAGTAAGCCCCT       CA-CCAGGCCATC GCAA GATGGCCTGGCTG        TTTTCCGCCCCCCTC 100 32
C2U40_RS20715 4425139 .. 4425160 + -15.9  -3.79251   AACCCAAGATGCAAA           CAGGCCACC CGAA GGTGGCCTG            TTTCATGGTGCGATC 100 40
C2U40_RS20725 4427115 .. 4427126 +  -5.8  -2.57026   ACCCAAGGGCCCAGG                CCCT GACA AGGG                 ATTGCTATGAATATG  50 4
C2U40_RS20730 4428263 .. 4428284 + -11.5  -4.42386   CATAGCTGATACAAA           GAGCCACCC ATAA GGGCGGCTC            TTTTGTGCATGGCGC  95 70
C2U40_RS20735 4429018 .. 4429043 + -10.4  -3.86776   CCTAATGTTAAATTA         G-GGGGCGCGC AGTAG GCGCGTCCCGC         TTTAATGATTAGTTG  81 487
C2U40_RS20760 NONE
C2U40_RS20765 4434572 .. 4434593 + -12.9  -4.96848   CCGCTGCAAACGAAA           AGGCCCCGC AGAT GCGGGGCCG            TTTTTATATGGCAAG 100 68
C2U40_RS20795 4440478 .. 4440497 + -13.6  -3.69395   GTTAAACGAAAAAAA            GCCCAGTC GTTA GACTGGGC             TTCTTAAGTAGTGGC 100 75
C2U40_RS20940 4468830 .. 4468856 + -13.1  -3.14051   AACACGAATCGACAT        GAAGAGGGGGCC CGCA GGCCCC-TCTTC         TATTCATGACGATCG  85 49
C2U40_RS20955 NONE
C2U40_RS20960 4473019 .. 4473040 + -14.4  -2.72344   CACCGGCTGATGACA           CCGGGGCC CGCCGC GGCCCCGG            TCATTCGCGCTGCCG  90 31
C2U40_RS20970 NONE
C2U40_RS20975 4474966 .. 4474983 + -14.1    -5.626   CGACAATGCCTTTTT             GCGCCCC GACA GGGGCGC              TTTTTTTGTCAGGTA 100 41
C2U40_RS20985 NONE
C2U40_RS20990 4480979 .. 4480997 + -13.1  -4.84914   ACTGAGCAACAAAAA             CGGCGCC ATCAA GGCGCCG             TTTTCTTATCTCGGT 100 48
C2U40_RS21015 4484440 .. 4484456 +  -9.4  -5.64421   GGTGACATCAAAAAA              GAGGCC GACTA GGCCTC              TTTTTTATTTCGGGT 100 14
C2U40_RS21035 4487030 .. 4487073 + -21.8  -3.97636   GACCGATCCGGTCTG AAACAAGAGGGGCGGCCCGTC ATC GACGGGCCGCCCCTCT-GTCA TTTATCCCTTCGACT 100 53
C2U40_RS21060 4491131 .. 4491164 + -14.5  -2.68755   TAGATGACGGCCAGA     CCGCGGCCGCCATCC ACCC GGATGCTGGCCCCGG      TCATGTAGTCGTTCT  90 44
C2U40_RS21070 NONE
C2U40_RS21080 4494025 .. 4494048 + -12.4  -3.10464   CCTGCAGCTTGGCCA          GCGCCGAGGG GTAA TCCTTGGCGC           TCTTCAGATTGATGC  68 323
C2U40_RS21090 4495614 .. 4495633 + -12.2  -5.40072   TCACTACATTCCTCC            CGGCAATC TTCG GATTGCCG             TTTTTTTACGCCGAA 100 210
C2U40_RS21120 4502068 .. 4502086 +   -16  -5.60993   CAACGCAATGAAAAA             CCGGAGCC ACT GGCTCCGG             TTTTTTTATGGGCGC 100 48
C2U40_RS21170 NONE
C2U40_RS21175 NONE
C2U40_RS21180 NONE
C2U40_RS21185 NONE
C2U40_RS21190 NONE
C2U40_RS21195 4518453 .. 4518470 +  -6.9  -3.16881   GGAGTGATGAGTGAC             CAAGGCG GTAG CGCCTCG              TTAGTCACCTACGTG  57 38
C2U40_RS21200 4519364 .. 4519374 +  -8.2  -3.95214   AGCGATGGGAATGTT                 GGCG AAT CGCC                 TCTTTTTGGATAGGT  74 77
C2U40_RS21205 NONE
C2U40_RS21210 4519708 .. 4519718 +  -4.6  -3.46602   GTACTGATGAGCAGC                 CTGG ATC CCGG                 TTGTCATCTCCCACA  53 19
C2U40_RS21215 NONE
C2U40_RS21220 NONE
C2U40_RS21225 NONE
C2U40_RS21230 4521258 .. 4521273 + -10.4  -5.54885   TACCCCCTTTCATGA              GGCACC GTTT GGTGCC               TTTTTTGTTGGTGTT 100 55
C2U40_RS21235 NONE
C2U40_RS21240 NONE
C2U40_RS21245 NONE
C2U40_RS21250 NONE
C2U40_RS21255 4522891 .. 4522914 + -18.2  -3.15999   CAAAAGCGCAATAAA          CAAGGCCCGC AATA GCGGGCCTTG           TTGCATCTATCACGC 100 11
C2U40_RS21265 4523582 .. 4523599 + -14.1    -3.887   CCTAATCAAACAAAA             GGCCCGC AACT GCGGGCC              TTGTTCATTCTGTAT 100 42
C2U40_RS21320 NONE
C2U40_RS21325 NONE
C2U40_RS21330 NONE
C2U40_RS21335 4532741 .. 4532766 + -14.7  -5.40474   GCGATCCCTCTGTGT         TGGCCGCTGCC CTTG GGCACCGGCCA          TTTTTTTAACGGCGT 100 52
C2U40_RS21340 NONE
C2U40_RS21345 NONE
C2U40_RS21350 NONE
C2U40_RS21355 4536497 .. 4536518 + -10.8  -3.18264   TGTATCCCGAGGACA           GCTGGGGG GGTTAA CCCCCGGC            TTGCTCACTCAACGC  74 12
C2U40_RS21360 4537740 .. 4537752 + -10.5  -3.21354   CGCCTGCCAGTCTGC                GGCCC GCT GGGCC                TTCATCACTCTCTCC  74 208
C2U40_RS21365 4539063 .. 4539073 +  -2.4  -3.40082   CCCTCTCCAACCCAG                 GTGC GGG GCCC                 TTGCTATGTCTTTAA  45 0
C2U40_RS21370 4540365 .. 4540389 + -18.7  -3.95153   GACGAGAGAATAAAA          GAAAGCCCCGA TAG TCGGGGCTTTC          TTTATAGGTCATTAC 100 28
C2U40_RS21385 4544564 .. 4544575 +  -3.6  -4.16279   ATTGCCTACCGCTGT                TCGG CTAT CCGG                 TTTTGGCATCATCTC  61 131
C2U40_RS21395 NONE
C2U40_RS21400 4548527 .. 4548541 +  -3.5  -4.09685   ACAGCCGCGCGCCGT               CAGCG GGAGA TGCTG               TTTTACGCCCTGCAC  60 121
C2U40_RS21410 4549499 .. 4549518 +   -15  -4.73388   GTCGTGAAATAAAAA            GGGCAGCC CGCG GGCTGCCC             TTTTTCATGGACGTT 100 45
C2U40_RS21430 4554385 .. 4554401 + -13.7  -5.93809   TTGTTTTTAAAAAAA              GCCCCTG TTT CAGGGGC              TTTTTTTTGTGCCCG 100 233
C2U40_RS21435 NONE
C2U40_RS21440 4555879 .. 4555896 + -12.7  -4.59109   CAAGAGATATCCAGG             TGGGCCC CAAG GGGCCCA              TTTTTGACCCCTGTC 100 51
C2U40_RS21445 4556586 .. 4556603 + -12.7  -5.07486   CCCCGAAGAGTTCGA             GGCGACC CGCA GGTCGCC              TTTTTGTTGCCGCTG 100 49
C2U40_RS21470 4563303 .. 4563316 +  -3.1  -2.61274   GGGTAATCAGGAAAA               GTGAT GCTT GTCAC                ATTCGTTCCCGTCAC  40 35
C2U40_RS21475 4563530 .. 4563556 + -15.2  -2.65766   CCCCTGACCCTCTCG         CCCAAGGGGAGG CGA TCTCCTCTTGGG         TCATCTCAGCTTTCC  95 34
        galE 4575815 .. 4575847 + -10.6  -3.08813   GCCAACCCCAATGGT     TACG-AGGCGTAGGC CCTG GCCTGCGCCTTCGGA      TGTATTCAACTCACA  72 14
C2U40_RS21515 NONE
C2U40_RS21520 NONE
C2U40_RS21525 4579259 .. 4579290 +  -4.4  -2.72344   ACCACCGAATCAGCC      GGAGTGA-GGCCC GCCGCAA GGTCCGTCGCTCC      TCATTGCACATCAGC  46 110
C2U40_RS21530 4580352 .. 4580392 + -12.6   -3.2963   AAACAGAGGTCAACA  GGCGTGACTGACCTGTCA GAACG TGACGGGGCAGTCATGGC  TTCTGACAGCATGCT  83 59
C2U40_RS21535 4581416 .. 4581431 + -10.4  -5.15634   CCAAGCAACACAAAA              GGGACC CGAG GGTCCC               TTTTTTCATGCCGTG 100 53
C2U40_RS21555 NONE
C2U40_RS21560 4586347 .. 4586374 + -22.8  -4.64861   CGCCGCGTCCATGCA        CAGGGCCGGGTG GCAA CACCCGGCCCTG         TTTCTTTTGGCGCCA 100 42
C2U40_RS21565 NONE
        hslU 4588504 .. 4588533 +   -13   -4.1585   TGCTCAATCCCATAG       C-AAGACGCCTCC CCTGT GGAGGCGTCTTCG       TTTTCAGCGTTCTCC 100 81
C2U40_RS21585 NONE
C2U40_RS21590 NONE
C2U40_RS21595 NONE
C2U40_RS21600 NONE
C2U40_RS21605 4597015 .. 4597043 +   -16  -4.58395   GCCTTGATCAGCTGA        TGCCGGTCTCGC CCAGT GCGAGACCGGCC        TTTTTCCGACATAAG 100 47
C2U40_RS21610 NONE
        nirD 4600253 .. 4600272 +   -15  -4.09685   GTTAAAAAACAGTCA            GGGCTGCC TGCA GGCAGCCC             TTTTAAGGACTCACA 100 125
C2U40_RS21620 4601110 .. 4601120 +  -2.4  -2.73735   CCGCCTGATCCGGAG                 GCCC CAT GGAC                 TACTTGCCCATCTTT  39 33
        cobA 4602540 .. 4602557 + -12.7  -4.97405   CTGCATCCATTCCAA             CGCCACC CTCG GGTGGCG              TTTCTTTTTCTGCAT 100 44
        mgtE 4604098 .. 4604124 +  -9.4  -3.53012   CGAGGCTGACCGTCT        GCGGCGCCTGC CATGAC GCGGG-GCCGC         TTTCACGCAAAAACG  71 45
        rraA 4604736 .. 4604753 + -11.3  -5.24531   GGAGCAGAGTGAAAA             TGGGAGC CCTG GCTCCCA              TTTTTTATGCCCGCT 100 43
C2U40_RS21655 4608103 .. 4608136 +  -5.1  -3.79747   TCACCGAAGCGCTCC     AGCTTGCGGTGACCG ACAC CGTTGACCGCCAGCA      TTTCCTCCTCGGTCA  58 180
C2U40_RS21665 4610517 .. 4610531 +  -2.2  -3.63341   GCGCTTCTAAGCTGA               TTTTAA TCA TTAGAA               TTCTTACCCCCTCTT  49 63
C2U40_RS21670 4611228 .. 4611247 +   -15   -4.4078   CAGACTCCACCAGTG            GGGCCACC GAGC GGTGGCCC             TTTTAGTTGGGCAAA 100 123
C2U40_RS21720 NONE
C2U40_RS21725 NONE
C2U40_RS21730 NONE
C2U40_RS21735 4623440 .. 4623459 +  -4.9  -2.93869   CCGTGCCCATCATGC            CGTGGGG CTGAAT CCCCACC             ATTTATCCCGTGATG  47 15
C2U40_RS21740 4624566 .. 4624582 +  -5.7  -5.14563   AGACCCGGCGCCTTC              GGGTAGG CTA CCAGCCC              TTTTTTGCTCAGGAG  83 74
C2U40_RS21745 4625997 .. 4626015 +  -3.1  -3.12668   GATCTGACCCAAATG             CAGCC AGGCATGGG GGCTG             TGTTGCCATTTAACG  43 34
C2U40_RS21750 4626539 .. 4626553 +  -2.7  -2.62983   ATCGTTTGGAATACA               CCCTG CGCGA CTGGG               TGCTCTAGGGCTCAC  40 3
C2U40_RS21755 NONE
C2U40_RS21760 4629327 .. 4629345 + -10.3  -5.06414   CTAGGCGTCAAGAAA             GCGGAAC CCTGT GTTCCGC             TTTTTGTTAAAGCCC 100 37
        pseB NONE
        pseC 4631666 .. 4631699 + -16.3  -3.14564   ACAAAAAATTTCTGA     TAATCATGAGTTACC CGAT GGTAACTCATGATTG      TTCATAACACGCTAA 100 26
        pseF NONE
        pseG NONE
        pseI NONE
C2U40_RS21870 NONE
C2U40_RS21875 NONE
C2U40_RS21880 4658730 .. 4658769 +  -4.2  -3.85698   TGCCGGGCGCGCACA  G-CTGCCGCTCGTTGGAGC CCC GCTCCAGGAAGCTGTAGGC  TTTGTAGCCCGGCGC  58 438
        trmA 4665913 .. 4665930 + -12.7  -4.14764   ACCAGCAAAACAAGA             CAGGGCC CGCG GGCCCTG              TTTGATTATTTAACC  95 62
C2U40_RS21925 4666767 .. 4666779 +  -3.3  -3.94381   TCGGGAGAGCACACC                CATGC GCC GCCTG                TTTATCCAGTTCTAT  55 62
C2U40_RS21930 NONE
C2U40_RS21935 4668359 .. 4668379 + -16.1  -4.02581   TTCCCGTAATGAAAA            GGGGCCCCG ACA TGGGGCCCC            TTCTGTTTTCTGCGC 100 54
C2U40_RS21955 4674042 .. 4674074 + -15.5  -3.60296   TGTCGCTGATGGTGA      AGCGGTCGCTGGCGC GCG GCGTCAGCGACCGGG      TTTGCCATGCGGGTG 100 51
C2U40_RS22000 4685007 .. 4685042 +  -3.3  -2.80074   GGGCAGAAAGAGACC   G-CGATGGCCCCTCG CATGGTCT CGC-GGGCCATCGGC    TGATATTATGGCCAC  41 45
C2U40_RS22005 NONE
C2U40_RS22010 4687028 .. 4687059 +  -2.1  -3.35679   CCGTGGTCATGCCCT      CGCCCGCCACAGAG ACACC CTC-GAAGCGGCCG      TTGTAGATGCGGCCG  45 81
C2U40_RS22025 4688835 .. 4688853 +  -3.1  -2.85351   GGGAGCGCTCTTGCG            TTCACCCG CCTG CGGG-GAG             TCTGATATGCCACCC  42 102
        pncB 4690067 .. 4690090 + -13.8  -5.15634   GATGGCAAACAAAAA          GCCCGCCAGT TTGC ACCGGCGGGC           TTTTTTCATCGGGTC 100 54
C2U40_RS22080 4700906 .. 4700928 + -17.8  -4.05788   GAGTAATCGATACAA           GAAGCCCGTC AAC GACGGGCTTC           TTTCATTTGACGACG 100 35
C2U40_RS22085 4702170 .. 4702181 +  -3.6  -3.13403   CGAGGGAGTTGATAT                CCTG CTCC CGGG                 TATTGGTCGAGAACA  47 65
C2U40_RS22120 4709871 .. 4709888 +  -2.7  -3.75153   CTGTTTCACAATTGT             TGAATGT CAGC ACAATCA              TTTGAATTCACCGCA  53 44
C2U40_RS22125 4711169 .. 4711183 +  -8.5  -4.11304   TCTGATTTGAATCAA               GGGGC CTGGC GCCCC               TTCTTTCTGCATTCA  77 36
C2U40_RS22130 4712266 .. 4712289 + -15.4  -5.40072   GGCCCGCCATGAGAT          GAAACCCGGT GAAA ACCGGGTTTC           TTTTTTTCGGGCCAG 100 48
C2U40_RS22135 4712903 .. 4712932 + -20.9  -2.96899   ACAAGCTCTAAGTGT       TTGAAAGGGCCGC ATTT GCGGCCCTTTCAA        TCTGATTACTTCCGG 100 30
C2U40_RS22140 4715330 .. 4715352 +    -4  -3.96497   CAACCTGCCCCTTCT           GCTGACGCTC CTC GGCCGTCACC           TTCTTCTGGTTTTCC  61 86
C2U40_RS22150 NONE
C2U40_RS22155 4719125 .. 4719157 +  -7.9  -3.18366   CTAACCCGCCTTGTT     CAGTGGTCGATTAG GCTTCG TTAATCGACC-CTG      TGTCTTCATTCCCGG  61 37
C2U40_RS22210 4732016 .. 4732039 +   -14   -4.5774   GCCACACAAGGTTAA          TAAAGGCGTC ATCA GACGCCTTTA           TTTTGGTTGTTAATC 100 42
        fadB NONE
C2U40_RS22220 4735709 .. 4735730 + -15.1  -5.63517   CGGAATCTGCGTATT           GGCCGGCCC GTTT GGGTCGGCC            TTTTTTATTTGCACG 100 200
C2U40_RS22225 4736654 .. 4736670 +  -5.8  -3.11634   ACCAGGTGGTTCTGG             CGGGCGC TGGT GC-CCCG              TTCCCTGCTGTCGCG  53 98
C2U40_RS22230 NONE
C2U40_RS22235 4739344 .. 4739376 + -21.5  -3.33315   CGCGGCGGCCAGAAA      CGACAAAGGCGGATG AGA TATCCGCCTTTGTCG      TTATGAAAGTATTGG 100 48
C2U40_RS22245 NONE
C2U40_RS22250 4740396 .. 4740419 + -19.6   -4.7497   CGCCGGATAACAAAA          GGCCCCGCCA TCGC TGGCGGGGCC           TTTTTCATGGCTGCG 100 50
C2U40_RS22260 4743430 .. 4743447 + -12.7  -3.99228   TGCCGATATGCAAAA             GGGAGGC ATCA GCCTCCC              TTCTCTTTTGCCTTG  93 62
        glyQ NONE
C2U40_RS22275 4747297 .. 4747314 + -14.1   -5.4505   TAAGTGACATAAAAA             CGGCGCC GAAA GGCGCCG              TTTTTTATTGGAAAA 100 52
C2U40_RS22295 4751207 .. 4751231 + -13.6  -3.53012   GGGAGCGAACACCAA         GCCGGGC-CAG GCAG CTGTGCCCGGC          TTTAACAACCCACGC  95 71
C2U40_RS22300 NONE
C2U40_RS22305 4752437 .. 4752482 + -20.7   -3.9941   CACAACCGGGCTACT CACCATGTAATAACGGACACC CAGA GGTGTCCGTTATTACATGCAG TTTCCTTGTAGGGAG 100 44
C2U40_RS22315 4754747 .. 4754772 +  -9.8  -5.65177   CAGGCTGTGTAAGAA         TCCGAAACTC CTTGTT GGGTTTCGGA          TTTTTTTATGCGTAT 100 174
C2U40_RS22320 4756570 .. 4756587 + -14.1    -5.252   ATTTTGAACGCAAAA             CGGCGCC ATCA GGCGCCG              TTTTTTGTCGCAGTC 100 487
C2U40_RS22355 NONE
C2U40_RS22365 NONE
C2U40_RS22370 4768205 .. 4768234 + -15.1  -3.72324   AAACTCGGGCCAAAC       AAAAACCCCCTCG CTGG CGAGGGGGTTTTC        TTGTTGATGGCGCTG 100 39
C2U40_RS22380 4770833 .. 4770852 + -13.6  -3.18452   AATAATCTGCCGGTC            GGGGTGAC ATGA GTCACCCC             TCCTTTCTTTGCGGG  89 36
C2U40_RS22385 NONE
        livM NONE
        livG NONE
        livF NONE
C2U40_RS22405 4775873 .. 4775883 +  -2.4  -2.71144   CGTGGCGCAGGCTGG                 CCGC AAA GCCG                 TGCTTGGCGCCGCTG  39 498
C2U40_RS22415 NONE
        glpG 4777406 .. 4777425 + -16.4  -5.06414   TGCTGGAAAACAAAA            CGCCGCCC CGAG GGGCGGCG             TTTTTATTGGCCGAC 100 124
C2U40_RS22430 4780450 .. 4780474 + -18.7  -4.07877   AGGTCGCCCATAAAG          CAAACCCCAGC CAG GCTGGGGTTTG          TTGTTTGTGGCCTGC 100 44
C2U40_RS22460 NONE
C2U40_RS22465 4788853 .. 4788875 +  -3.2  -4.07885   ACCCTTGAGTTCATT           GGGCTGGCGC ACC GAGCTCGTCC           TTTTCACGCAAGCTG  58 129
C2U40_RS22470 NONE
C2U40_RS22475 4790234 .. 4790267 + -19.7  -4.44245   ACGGCCAATAGATGG     CAAGAGGGCCAACCC CGCC GGGTTGGCCCTCTTC      TTTTATCCCTCGTGT 100 30
C2U40_RS22545 4804724 .. 4804741 + -12.7  -4.02719   AGCGGATACAAAAAA             GCCTCCC GATT GGGAGGC              TTTAATATTTAATGG  95 45
C2U40_RS22605 4816337 .. 4816353 + -13.7  -3.49653   CCAGACAAACAAAAA              GAGCCGC AAT GCGGCTC              TTGTATGCAAGTAAT  95 52
C2U40_RS22680 NONE
C2U40_RS22685 4841552 .. 4841564 +  -3.3  -2.78032   ACTGGCCACATAAAG                CGGCG CTA TGCTG                ATGTTTTCCCAGCGA  41 49
C2U40_RS22690 4842407 .. 4842423 + -15.1  -5.61596   CCTGTGATACCCAGA              CCGGCGC CAG GCGCCGG              TTTTTTTATCCCCCT 100 34
C2U40_RS22695 4843887 .. 4843906 + -16.4  -3.89336   GTACTGAAAACAAAA            CCGGCGCC ATCA GGCGCCGG             TTTGCATTTCATTGA 100 34
C2U40_RS22775 4860215 .. 4860237 + -15.6  -4.19746   CTGGTAATCGAAGTG           GGGTGGGAAC CCG GTTCCCGCCC           TTCTTTTCACCTGCA 100 34
C2U40_RS22780 NONE
C2U40_RS22785 NONE
C2U40_RS22790 NONE
C2U40_RS22795 4865647 .. 4865688 + -21.2  -2.90219   TGGTGGATGAAAAAC GCGCAATAAAAAGCCCGGG ATGAA CCCGGGCTTTTTATTG-GC TCTGTCCCAGTTATG 100 43
C2U40_RS22815 4869840 .. 4869854 +  -2.1   -4.2349   GGTCATTTATCCGAG              GCGCTC ATAC GA-CGC               TTTTCGATATACAGC  58 43
C2U40_RS22820 4870436 .. 4870446 +  -2.4  -4.57073   GTCAAAGTAATTGTC                 GCGG AAA CCTC                 TTTTTAAGCAGCCTC  63 73
C2U40_RS22830 NONE
C2U40_RS22835 4874829 .. 4874853 +    -5  -3.63839   ACTTCGCCGGAATAC         GCACCGTCTCA TACT TGAGTC-GTGC          TTGCTTCTTTGCTCG  55 103
C2U40_RS22840 4876789 .. 4876811 +  -4.9  -4.56597   AACCTAAAATCATGG           GAACTCATA TCGTT TTTGAGTTC           TTTTTGACAGCCGAA  70 40
C2U40_RS22845 4877459 .. 4877471 +  -4.1  -3.50853   CTGTTTGCAGGTGGT                CCTTT TTT AAGGG                TTCTGGTTAAACAGC  51 77
C2U40_RS22850 NONE
C2U40_RS22855 NONE
C2U40_RS22860 4881103 .. 4881121 + -10.3  -4.41047   TGACCGAGATGACTA             GGCCACT ACATG AGTGGCC             TTTTGCTTAAGGCGT  90 382
C2U40_RS22870 4885429 .. 4885449 +  -5.4  -3.91897   ATCGATTGCTAGGTA            GTCGGAGG AGGGA TCTTCGAC            TTTCTCGATGCCCAG  60 401
C2U40_RS22885 4886382 .. 4886392 +  -2.4  -2.59668   CGTGTGCGGCAAGCT                 AGCC ATG GGCG                 GTTGTGAGGCTGTTA  38 8
C2U40_RS22890 4887238 .. 4887249 +  -5.8  -3.53031   ACACGCCGGGCTGGA                GGCA AACG TGCC                 TTGCTTTGAACTAAC  58 5
C2U40_RS22895 4888214 .. 4888241 + -17.1  -4.39877   TTATCTAAGATAATC        TAGGCCAGCGC ATGGTC GCGCTGGCCTA         TTTGTTGGTTCTTCC 100 155
C2U40_RS22945 NONE
C2U40_RS22950 4898654 .. 4898664 +  -2.4  -2.84812   TCAGTACGTGGTAAT                 GCCG ATG CGGA                 TCTAGTCGTGTCCCT  41 10
C2U40_RS22955 NONE
        gyrB 4902212 .. 4902230 +  -5.9  -5.50723   GCTCGATATAAAAAA             ACCGCTC CCTGT GAGCGGC             TTTTTGTTTTCCTGG 100 54
C2U40_RS22975 4903748 .. 4903758 +  -6.8  -2.60988   AAGATCGAGATCAAC                 GGCT GAT AGCC                 TGACTTCATTGAATT  52 20
C2U40_RS22980 4904305 .. 4904334 + -16.5  -4.96848   CAGCGCGTGATAAAC       AAGAGAGGCCTGC ATGT GCAGGCCTCTCTG        TTTTTGTATCGCCGA 100 47
C2U40_RS22990 4906132 .. 4906149 + -10.5  -3.31726   GAGTTGAGATAGCGC             CGCGGGG TCTG CCCCGTG              TGTTGTCTGAAGAAG  76 34
C2U40_RS23000 4908250 .. 4908269 + -11.4  -3.61715   CGATCAGCGTGGGTT            GCTGGGGG TTAT CTCCCAGC             TTCTTGCGCAGGCTG  73 178
C2U40_RS23060 4925206 .. 4925222 +  -2.9  -2.56914   TGAAGAACGAAAACA              GCTGTGG TGG CTGTAGC              TCAGTTGGTAGAGTC  40 70
C2U40_RS23065 NONE
C2U40_RS23070 4925412 .. 4925431 +  -6.4  -4.45168   TTGCTGTATGACGAG            GATGACCG TTCA TGGTCGTC             TTTGTGTTTTGAAAA  74 44
C2U40_RS23075 4925555 .. 4925570 + -11.8   -5.4387   CCACATTCTGAAAAA              CCCCGC TCAG GCGGGG               TTTTTTGCTTTCTGT 100 38
C2U40_RS23080 4926641 .. 4926672 +  -2.9  -3.44051   GTCGATCACCATAAC      GCTGGTTCAGCTC TGCCTC GATCTGCAGCAGC       TTCTCGTGCTCGCCG  49 429
C2U40_RS23120 4934815 .. 4934836 +  -6.5  -3.14132   CCGGTTTGATCTGGC           GCTGATGGC GGAT GCCATCGCC            TTGCTGGAGGCAGGG  54 149
C2U40_RS23125 4935756 .. 4935771 +  -3.2  -3.75024   ATTGACCAGCAGACC              CGCC GGGATCAG GGCG               TTGTTCATGATGGCC  54 156
C2U40_RS23135 4937356 .. 4937387 +    -3  -3.01712   CCGAGCCCAGGATCA      GGGCCAGTGCCAC GCCGGTG GTGG-ACTGGATC      TGTTCGCCGAGGAAC  43 393
C2U40_RS23150 4939291 .. 4939334 +  -9.6  -3.30124   CGTCGGTCAGGGCGC GCGCCTGCTCGGTGC-CCTG CTGCAA CAGGCGCAGC-AGCTGGCGC TTGTCGGCGATGGCC  63 78
C2U40_RS23165 4942889 .. 4942903 +  -7.8  -3.32647   CTGTCTCCCGCCTGA               TGGCCG TGG CGGTCA               TTGATCTGCTTGAAG  58 405
C2U40_RS23175 4945086 .. 4945107 +   -13  -5.30616   CAGCCAGTACAATGA           CGGCCCCT CTCAAC AGGGGCCG            TTTTTCTTTGGATGA 100 62
C2U40_RS23180 4946450 .. 4946468 + -13.1  -5.31456   CTCATCCACTTCAGA             CGCGGCC GCTCA GGCCGCG             TTTTTTATGGGTTAC 100 158
C2U40_RS23190 4948895 .. 4948907 +  -3.3  -3.73775   AACGCACCACGGCGC                CTGGC CTG GCCAC                TTTCATCAAGCTGGG  54 370
C2U40_RS23220 NONE
C2U40_RS23225 4959552 .. 4959568 + -12.3  -3.19463   CGGAATGAAAATGAA              GGCATGC CGG GCATGCC              TTCATGGATGGTCAA  81 33
C2U40_RS23235 4961950 .. 4961975 +  -5.3  -3.48276   AGGATGAGTATTTGA         TGCGGGAGGTG CTGG CCTCTCCTGCG          TTCTCTCAGGGGGCA  56 109
C2U40_RS23240 4962712 .. 4962722 +  -4.6   -2.9953   CAAGGCGTTCCGTCA                 GCTG ATG CGGC                 TCTGATTGTCATTCA  48 10
C2U40_RS23245 4964058 .. 4964078 +   -14  -5.60993   AGCAAGCAATGAAAA            GACCCGGG CCTGA CCCGGGTC            TTTTTTTGTGCGCGG 100 56
C2U40_RS23270 4968243 .. 4968280 +  -3.6  -2.71263   AAGACCTGCCAAAGT  TCGTATTTCG-GGCCG AGAGAAAC CGGCCACGAAGTA-GA   TGCTTACGCGAACTT  43 226
C2U40_RS23275 4970181 .. 4970201 + -16.1  -4.66938   GAAGATAAAAAGCGA            GGCCCCGCC ATT GGTGGGGCC            TTTTCTATTGGCGGT 100 64
C2U40_RS23280 4971173 .. 4971183 +  -4.6  -3.54424   TCCTTGTCGTTGAGT                 GCGG CGA TCGC                 TTTGGCGGCATCGGC  55 144
C2U40_RS23290 4973781 .. 4973802 +  -8.7  -3.05069   AGTTAGAGCAAAGAC           CTGATGCGC CTTG GCGTGTCAG            TGCTTGTTTGGTGAA  62 88
C2U40_RS23295 4974016 .. 4974044 + -14.1  -4.65747   TTGCTAACAAGAATG        CAGACATAAGCAT CAC ATGTTTATGTCTG        TTTTCTTCGGCCTTG 100 50
C2U40_RS23300 NONE
         rrf 4977327 .. 4977346 +   -15  -5.60689   ACCCAACACGAGAAA            CCCCGCTC ATCT GAGCGGGG             TTTTTTATTGTCTAA 100 41
C2U40_RS23320 4981323 .. 4981339 +  -5.8  -3.61398   AGAAGGCACGGATCA              GTGGCT CTTCC AGCCGC              TTCTTGAGCACGGCG  57 64
C2U40_RS23330 4983973 .. 4983993 + -18.3  -4.27316   CCCGGCCACAAAAAA            GCCCCGCTC ATC GAGCGGGGC            TTTTGCATTCAGAAA 100 127
C2U40_RS23345 4986304 .. 4986323 + -10.7  -5.32882   ATGCTGAAAACAAAG            TCCGGCC CAGGGT GGCCGGA             TTTTTTATGCTCGTC 100 55
C2U40_RS23370 4990673 .. 4990708 +  -6.2  -3.72893   TAAAATGCCGCCTTC    TGTTTGCCCCGC AATCGAAGGCCA GCGGGGCAGATA     TTTGCTCGAGCAATG  63 88
C2U40_RS23375 NONE
        rpmG 4991188 .. 4991204 + -10.8  -5.60993   CTGCATTCCCAAAAA              CCCGGC CTAGT GCCGGG              TTTTTTTATGGCCGA 100 51
C2U40_RS23385 NONE
C2U40_RS23390 4992566 .. 4992585 +  -5.7  -3.30007   CTGAATCGCGGTTTT            TTTGGCC TGAAAT GGCCAAG             TTGTAAGAGAGTATT  54 37
C2U40_RS23395 4993632 .. 4993668 + -15.4  -3.46202   CGCGCAGGCTCCTTG   CAGC-AAACAGGCTACC CTCG GGTAGCCTGTTTCGTTG    TTACTTGGTCTGTTT 100 43
C2U40_RS23405 4995439 .. 4995463 + -20.1  -2.62184   AATGATGTGAATGCA          GACAGGGCCCT TGA AGGGCCCTGTC          TCGTATGAGGGGAAG 100 46
        waaF 4997624 .. 4997647 +  -2.5  -2.62616   GGGCAAGCGCAGGGA         GCCGCACTAGC ATGG GCTA-T-CGGC          TGCTCTACAACCTGC  38 16
C2U40_RS23420 4998924 .. 4998942 +   -16  -5.40464   ACGGATATAAAAAAA             CGGAGCGC ATG GCGCTCCG             TTTTTGTTTGTCGTG 100 49
C2U40_RS23440 NONE
C2U40_RS23445 NONE
C2U40_RS23450 5003549 .. 5003571 + -20.6  -5.40474   CGCGCATTGAATACA           CAGGCGGGCC TCG GGCCCGCCTG           TTTTTTTGGGCGGCT 100 43
C2U40_RS23455 5003999 .. 5004024 +  -3.9  -4.32857   AGGCTGGACCGATCA         GTAGCC-GGGCT GGC GGCTCAGGCTTC         TTTCTCTTTCAACCG  65 22
C2U40_RS23470 NONE
        ubiA 5006291 .. 5006307 + -13.7  -5.34555   CCTGTCATGAAAAAA              GGCCGCA TGT TGCGGCC              TTTTTTATGGTGTCG 100 48
C2U40_RS23485 5009595 .. 5009623 + -23.3  -4.11838   ATGTAATCCTTGCCA        CGAAACGGCCTCC TGC GGAGGCCGTTTCG        TTTCTGTACTCCTTT 100 35
C2U40_RS23495 5010327 .. 5010356 + -13.5  -4.09739   GCATCACTGCTTCTT       GTGCAGCCCCACC TCAT GGTGGGGCTGCTG        TTTTGGGCGGGTTCG 100 41
C2U40_RS23505 NONE
C2U40_RS23510 5012625 .. 5012636 +  -5.8  -3.72576   AGCCCGCGTAGCCCA                GCTG GCGC CAGC                 TTTCGTAGACGAACA  60 83
        fieF NONE
C2U40_RS23535 5016948 .. 5016963 +  -2.6  -2.79796   GACAAGCCTTCGCTG              GACA-TG GAT CAGTGTC              TCTGATCCCCTGACC  39 5
C2U40_RS23540 NONE
C2U40_RS23545 5018754 .. 5018776 + -20.6  -4.46514   CGCGAGAATTGAAAA           CGGGCCGCTC CAT GAGCGGCCCG           TTTGTTTGGGTCAGT 100 53
C2U40_RS23560 5022634 .. 5022665 + -13.8  -3.96148   ATATAGCTATATAAG      AAGAGAAGCCCGGCA TGA TGCCGGGCTTC-CTG      TTTGTGGTGGCGGGG 100 56
C2U40_RS23570 5025263 .. 5025273 +  -5.4  -3.53811   GTTCACACAGATTGC                 CTTG ATT CAAG                 TTTAGAGACAGTACA  56 60
C2U40_RS23575 NONE
C2U40_RS23580 5025663 .. 5025681 +  -8.8  -3.70081   GTACGACAACAAGCT             GCGTCGGT TTC ACCGACAC             TTCTTGGGGTTGTAT  69 231
C2U40_RS23585 NONE
         rrf 5028859 .. 5028871 +  -9.1  -2.62667   AAAAGATTTAGATAG                CGCAC ACA GTGCG                GTCTTTACCGGTTAG  62 101
C2U40_RS23595 NONE
         rrf 5029118 .. 5029137 +   -15  -4.66163   CACCTATTTAGAAGA            GGCCTCCC ATTC GGGAGGCC             TTTTTGCATAGGAAT 100 40
C2U40_RS23605 5030219 .. 5030239 +  -4.1  -2.98472   TGCGCGGTACTACGC            GATAATTTT AGT AAAACTATC            CTGTTTTTAGTCGCA  46 21
C2U40_RS23610 NONE
C2U40_RS23615 5034105 .. 5034138 +  -2.4  -3.54543   CTGACAAAGCCGGAA     GGGCGGGGC-TCA CCCTACAAA TCATGCCCCGCTC     TTTCGCGAGATAACT  47 59
C2U40_RS23620 NONE
C2U40_RS23625 5036047 .. 5036069 +   -12  -3.53012   GAACGGGATTGCGAG           CCGGTGCGGT GAG ATTGCACCGG           TTTACCAACGAGGCC  82 39
C2U40_RS23630 5037753 .. 5037781 + -20.5  -3.51778   GCTGGGGATTCGTTT        CAACAGGAGCTGT GCC ACAGCTCCTGTTG        TGTTTCCTGTCGTCC 100 141
C2U40_RS23635 5038838 .. 5038860 + -19.2  -4.14397   GGTCCGGATAAAAAA           GAGGGAGGCC ATG GGCCTCCCTC           TTTCGTTTGTCGCCT 100 43
C2U40_RS23645 5042143 .. 5042161 +   -16   -3.6502   ACCGACCAGAAAAAA             CAGGCCCG TCA CGGGCCTG             TTTCGATCAGAGGTG 100 53
C2U40_RS23660 5045224 .. 5045241 + -14.1   -4.1899   TCGCTCAATAAAAAA             GGCCCGC ATGT GCGGGCC              TTTTGCATGGCATGA 100 43
C2U40_RS23685 5052721 .. 5052744 + -18.2   -4.1523   TGCCTTTTGATAAAA          CCAACCCGGC TTAG GCCGGGTTGG           TTTATATATCATAGC 100 48
C2U40_RS23710 5057558 .. 5057581 +  -3.7  -4.70659   GAGTGAATGTTGCGC          CGCGCGCTC AATCAA GAGGGGGCG           TTTTTCCCTGTCGCA  70 115
C2U40_RS23725 5060214 .. 5060236 + -17.8  -3.10091   GGCCCCGCATAAAAA           GAGCCTGCCA CTG TGGCAGGCTC           TGTCGTTTTCGGGGT 100 64
C2U40_RS23745 5063111 .. 5063157 +  -5.7  -3.37975   AGCAGGTTGACCGGG CGCGG-GGCGGGCAGGGCATCC GCCA GGATCTCCTGCAGGGTGCCGCG TTCTAGCTCCTCGCT  52 129
C2U40_RS23755 5064631 .. 5064641 +  -4.6  -3.38072   TGAGGTAGGCGAGGA                 CCCG GAC TGGG                 TTCCTGTTGGCTGCA  51 33
C2U40_RS23760 5066010 .. 5066032 + -19.2   -3.9693   GTGCTTGCCAATAAA           CAACGGGGGC TTG GCCCCCGTTG           TTGTTTCGATGGCTC 100 68
        mgtA 5072954 .. 5072977 + -16.8   -4.7497   AACAATGAACGCAAA          GAGGGATGGC CTGG GCCATCCCTC           TTTTTCATGGCTGGC 100 77
C2U40_RS23810 5079739 .. 5079756 +  -2.6  -2.74784   ACCCTGCTGCAGGAC             GCCCTG CAGGCC CAGGAC              TGACTTTTAACCGGT  39 5
        mmsA 5081388 .. 5081404 +  -5.1  -3.34522   GCCCGGACATGGCCC              GGTGG CAGGAAT CCACC              TTCGTTCGCCGCTAT  54 59
C2U40_RS23820 NONE
         ald 5083371 .. 5083385 + -12.8  -4.03078   CCGCGATTTCAGGGA               GGGCCG TCA CGGCCC               TTTCTCATATACTGG  95 90
C2U40_RS23830 5084483 .. 5084506 +  -5.8  -2.52156   TAAGATGCGGACCTT          GCGCGGGCGC AAGC GCTTCCCCGC           CTCTTAGCTTTAGGT  49 243
C2U40_RS23835 5085033 .. 5085056 + -16.8  -2.63112   GCCAGGCAAGCATGA          CAAAGGGGCC CACG GGCCCCTTTG           TCATCTCCGGGATTT 100 41
C2U40_RS23845 NONE
C2U40_RS23850 5087307 .. 5087331 + -20.1  -2.61484   TGCTTCATGCAACAA          GAAGGGCAGCC AGT GGCTGCCCTTC          TGCATTGCTTCGTCT 100 53
C2U40_RS23880 NONE
        dprA NONE
C2U40_RS23890 5096070 .. 5096084 +  -2.8  -3.53012   GCCGCGCTGGTAGAA               TTCAGG TCA TCTGGA               TTTCAAGGCGCGGCC  49 50
C2U40_RS23895 NONE
        purE 5097344 .. 5097364 + -11.1  -5.24531   GTTAATCAATGATGA            GGCGACAGC CCG GCTGTCGCA            TTTTTTATGCCCAAT 100 133
C2U40_RS23905 NONE
C2U40_RS23910 5098940 .. 5098956 + -13.7  -3.94877   GTGGTTGTGACCAGA              GGGGCCA TGA TGGCCCC              TTCTTATTGGCCGAT 100 31
C2U40_RS23915 NONE
C2U40_RS23920 5100212 .. 5100233 + -10.9  -5.77988   AGTCACTTTTATAAC           TCCCCGGTA TTCG TACTGGGGA            TTTTTTTATCTATAT 100 121
C2U40_RS23930 5102351 .. 5102371 + -16.9  -4.88293   TCTCATTGATATTGA            CGAGGAGCC GCC GGCTCCTCG            TTTCTTTTTGGCCTT 100 59
C2U40_RS23940 NONE
C2U40_RS23945 NONE
        hemN 5105599 .. 5105628 + -16.7  -3.84719   GATGTCGTTGGAAAA       TAAAAAAACCGCC GAGA GGCGGTTTTTTTA        TTTGGGTTTGCCCGT 100 48
        typA 5113623 .. 5113638 + -10.4  -5.57054   ATCGACAGACAGAGA              GAGGCC TTCG GGCCTC               TTTTTTTAGGTTCTT 100 50
C2U40_RS23985 5115024 .. 5115037 +  -6.7  -2.69151   CGGCCGGCCCACGGG               TGGTC AAAT GACCA                TGCTATCTGACACAA  52 102
C2U40_RS23990 5115982 .. 5116013 + -21.6  -4.19735   TGCTGTTAGCATCGA      CGACCGCCCCCACC AGTA GATGGGGGCGGTCG       TTTCGTTTTGAGAGG 100 51
         dtd 5116561 .. 5116610 +    -4  -3.21747   GGCCGACCCACTGCT CCAGCAGCATCAGCACCCGGGTC AGCTC GAGACGGGTGC-GTGGCAGCAGG TTGATGATGAGCTCG  47 112
C2U40_RS24005 5118245 .. 5118273 + -17.6  -4.54047   CTGGCTCCCATCAAG        CAACAAGGCCTC ATCGC GAGGCCTTGTTG        TTTTCTATCGGCTAG 100 48
        idnK NONE
C2U40_RS24035 NONE
C2U40_RS24040 5128733 .. 5128763 + -16.3  -4.20084   CTTCCGTTTGCCAAG      CA-AGCAGGCCACC CTCG GGTGGCCTGCTCTG       TTTTGGCTGCATGGT 100 64
         qnr 5130608 .. 5130624 + -12.3  -3.24924   GCGGCGATCAAAAAA              GCCTGCA TCA TGCAGGC              TCTTCTGGATGGCAG  81 93
C2U40_RS24065 NONE
C2U40_RS24070 NONE
C2U40_RS24075 5135851 .. 5135882 + -18.8  -3.72576   GCTCGCCACAGAATG      CAAAAGGCCCCGCC AGCT GGCGGGGCCTTTTC       TTTGCTGCAAGAGCA 100 44
        bioH NONE
C2U40_RS24095 NONE
C2U40_RS24100 5139183 .. 5139197 +  -4.2  -3.67954   CCAGCAGAACCTGAG               CCTGAG TGT CTGAGG               TTTCCAGTGTATTTC  53 13
C2U40_RS24105 5139593 .. 5139606 +  -9.5  -4.78149   AACAGCGACAAAAAA               GCCCC TCGC GGGGC                TTTTTGCATTCTAGG  95 49
C2U40_RS24120 NONE
C2U40_RS24125 5144996 .. 5145014 +  -7.4  -3.62275   GCGGCTCGCTGGTCT             TGCGGTAG CGC CTGCCGTA             TTTCAGCTGCTGGAT  66 84
C2U40_RS24135 5146536 .. 5146551 +  -2.5  -3.33696   CAGCTGGTGTAGACG              TCCAG ATCAGC CTGGG               TTAATTACGGAAAGA  45 6
C2U40_RS24140 NONE
C2U40_RS24145 NONE
C2U40_RS24150 NONE
C2U40_RS24155 NONE
C2U40_RS24160 NONE
C2U40_RS24165 NONE
C2U40_RS24170 NONE
C2U40_RS24175 NONE
C2U40_RS24180 NONE
        rpsQ 5151225 .. 5151251 + -18.1  -5.05782   CGGTACTTTGTAGTC         CAAACGGCCCC TTAGT GGGGCCGTTTG         TTTTTTAGGCTACCT 100 42
C2U40_RS24190 NONE
C2U40_RS24195 NONE
C2U40_RS24200 NONE
C2U40_RS24205 5152900 .. 5152912 +  -4.8  -3.72027   AGGGCGAAATTCCGG                GCCT GAAGA AGGC                TTCTTGGTAACGAAT  58 3
C2U40_RS24210 NONE
C2U40_RS24215 NONE
C2U40_RS24220 5154230 .. 5154240 +  -3.2  -3.32963   CTGCTGCACGTGACG                 CTGG TCT TCAG                 TTCTAAGCTAGGAGT  47 9
C2U40_RS24225 NONE
C2U40_RS24230 NONE
C2U40_RS24235 NONE
C2U40_RS24240 NONE
C2U40_RS24245 5156886 .. 5156930 + -17.6  -3.18366   TACGGTTAGTACTTG CAACAAATAGTTGTGCTGGCTA ATA TAGCCAGC-CAACT-TTTGTTG TGTATTGGTTGACCG 100 46
C2U40_RS24250 NONE
C2U40_RS24255 5157750 .. 5157777 +  -2.6  -3.28261   TTGTCGTCCTCCCAA        GAAGC-GCCGCGT GTA ACGCTGTAGCTAC        TTGGTCTAGGATTGT  45 10
C2U40_RS24260 5158410 .. 5158428 + -10.4  -2.59431   ACAGCTGATCGTCGA             GCTTTACT CCA AGTAAAGC             TAGCTTCTAAAGAGA  66 10
C2U40_RS24265 NONE
        rplQ 5159878 .. 5159894 + -10.8  -5.13722   AGTGATAAAGAAAAA              GCCGGG CTTGT CCCGGC              TTTTCTTTTAATGGA 100 36
C2U40_RS24280 5162373 .. 5162383 +  -5.4  -3.53811   GTTCACACAGATTGC                 CTTG ATT CAAG                 TTTAGAGACAGTACA  56 60
C2U40_RS24285 NONE
C2U40_RS24290 5162773 .. 5162791 +  -8.8  -3.70081   GTACGACAACAAGCT             GCGTCGGT TTC ACCGACAC             TTCTTGGGGTTGTAT  69 231
C2U40_RS24295 NONE
         rrf 5165988 .. 5165998 +  -2.4  -2.76189   AAAAAGCTAACCAGA                 CAGC GGA GCGG                 TAGTTCAGTCGGTTA  39 120
C2U40_RS24305 5166080 .. 5166099 + -13.6  -5.72207   GCCACTACTTAAGAA            GCCCAGTC TAAC GACTGGGC             TTTTTTTCGTTTAAC 100 37
C2U40_RS24340 5173376 .. 5173392 +  -2.1    -3.767   TCCCCCTGGGCCAAG              GGTTACC ATA GGCCACC              TTTCGTCAATGAGTC  51 76
C2U40_RS24345 5173769 .. 5173783 +  -2.8  -3.49475   TTTTGGGCATTTCTT               CTTATC CGA GGTGAG               TTATGTACAAGTCCC  49 58
C2U40_RS24350 5174299 .. 5174324 + -20.5  -4.18018   CACGGTCAGGTATGG         GGGCCGCCATC GCGA GATGGCGGCCC          TTTTACATCAGGGCG 100 107
C2U40_RS24355 5176805 .. 5176829 + -17.3  -3.15354   GCCGTTATGACTCTT          TAATTGGCCCC CTC GGGGCCAATTA          TCTTCGGTTGGCATG 100 235
C2U40_RS24360 5178014 .. 5178051 +   -20   -2.9834   CGCTGTCACTCTCTT   CGACACCCGCCTGCCGC AATCC GTGGCAG-CGGGTGTCG   TGTCGTTGTACTCGT 100 57
C2U40_RS24365 5180654 .. 5180672 +   -16  -4.30576   ACAAGGTCAATAAAA             CGGCGCCA TCA TGGCGCCG             TTTTCATGCTCCCCG 100 42
C2U40_RS24380 5181843 .. 5181858 + -11.8  -4.44284   GTGCAGACAAAAAAA              CGGGCC CTCA GGCCCG               TTTTGCTATTCCATT 100 74
C2U40_RS24395 NONE
C2U40_RS24400 5185861 .. 5185894 +  -6.1  -2.78384   CCCCACGAAAATTAA    TCG-CT-CGCCCTGC CTCAGC GCAGGGTGAAGTCGA     TGTCCTCGCCCGCGC  51 26
C2U40_RS24410 5187698 .. 5187710 +  -4.1  -2.71684   CTCCTTTTGTTGAAG                GCTTA GCC TGAGC                GTTGTATGGATACTT  43 111
C2U40_RS24415 5188343 .. 5188361 + -12.4  -5.50499   CCAACAGAAAAGACA             TGGGGCTC GAC GAGCCCCG             TTTTTTTGCCTGTGA 100 53
C2U40_RS24425 NONE
C2U40_RS24430 5190157 .. 5190174 + -12.7  -3.07233   AGCCTGCTGATGACA             CGGCAGG CTTG CCTGCCG              TGTTGACCCTTCTGC  79 40
C2U40_RS24435 5191925 .. 5191936 +  -3.6  -2.55544   GTCTGTGACTGATGG                CGGG GCGA TCCG                 TGAGTTCCATGGTAA  43 158
C2U40_RS24440 5193645 .. 5193670 +  -9.7  -5.17576   ACATGCTATTTGCGA         GGGGGTGACAT GCGA GTGTCACCCCA          TTTTTTAGGTTCATC 100 393
C2U40_RS24455 NONE
C2U40_RS24460 5197368 .. 5197391 + -14.6  -3.58726   CCAGAACCACCATGA          CAGAGCCGGG ATTA CCCGGCTTTG           TTGTCTGTGCCGCGC 100 53
C2U40_RS24475 5200691 .. 5200708 + -12.7  -3.20382   GTCGTGCGCCCCCAA             CCCCGAC CCTG GTCGGGG              TTGGTCACTGTCAGG  81 75
        ftsE NONE
C2U40_RS24485 5202623 .. 5202645 +  -7.7  -5.52909   AGCATGCTACTTTTC           GGGGGTC CTTTATTGT GACCCCC           TTTTTTTGACTGTTC 100 295
        rpoH 5203747 .. 5203776 + -15.9  -3.54129   TGATGCTTCCTCTCA       TAAAAACAGGGCC TGAT GGCCCTGTTTTTG        TTTGACGGGGATCTG 100 112
C2U40_RS24495 NONE
        hutC 5205257 .. 5205287 +   -17  -3.40112   TATACATATTATTTT       TGAAAAAGCCCGCC TCT GGCGGGCTTTTTTG       TGTTTAAGCTCTAAT 100 46
C2U40_RS24505 NONE
C2U40_RS24510 NONE
C2U40_RS24515 5209322 .. 5209332 +  -6.8  -2.67588   CGGTGTCAAAGGAAA                 GGTG TAA CACC                 ATGTTTGAATTGACT  52 19
        hutH 5210961 .. 5210980 +   -15  -4.45544   GAGCAGATAACAAAA            GACCGCCC AATC GGGCGGTC             TTTTCGTTGCTGCGG 100 121
C2U40_RS24535 5216291 .. 5216316 + -19.1  -4.87665   GCCTGATGGTTGCAA         GAGAGGGTCGC CTGG GCGACCCTCTC          TTTTTGTGGCTCAGC   0 35
C2U40_RS24530 5212155 .. 5212171 -  -7.9  -3.24329   GACGGGTAAGGAACA              GGGTGGC AGC GCCACAC              GAGGTGGCGTGCCTG  61 131
C2U40_RS24525 5210956 .. 5210985 - -15.1  -3.54475   TCTCGGAGCAGATAA       CAAAAGACCGCCC AATC GGGCGGTCTTTTC        GTTGCTGCGGTTGGT 100 47
        rsmD 5197897 .. 5197923 -  -4.2  -2.64155   CGTTGTCCAAATTGA         CGGGGAGGGGCA CCG CGCCCATCTCCT         CCCTTTAAACTGCAG  43 30
C2U40_RS24465 5197331 .. 5197353 - -12.1  -4.13561   CGTGGGGAAAAAAGA           GAAGGAGTG ACCAG CACTCCTTC           CAGAACCACCATGAC  95 51
C2U40_RS24450 5195018 .. 5195035 - -12.7  -4.83169   ACGCGCCCAGAAAAA             GACCGCC GATT GGCGGTC              TTTTTCTTTGTTCAG 100 56
C2U40_RS24445 5193489 .. 5193508 -  -9.2  -3.52539   CAACTGCAAGGACAA            CACGGTGG CTTG CCGCCGTG             CGGAAGAGGGTCGTG  71 198
C2U40_RS24420 5188344 .. 5188360 - -13.7  -2.72181   CAACAGAAAAGACAT              GGGGCTC GAC GAGCCCC              GTTTTTTTGCCTGTG  85 86
C2U40_RS24405 5185861 .. 5185894 -  -3.9  -3.71672   CCCCACGAAAATTAA    TCG-CT-CGCCCTGC CTCAGC GCAGGGTGAAGTCGA     TGTCCTCGCCCGCGC  56 6
C2U40_RS24390 NONE
C2U40_RS24385 5181843 .. 5181858 - -11.8  -5.71712   GTGCAGACAAAAAAA              CGGGCC CTCA GGCCCG               TTTTGCTATTCCATT 100 52
C2U40_RS24375 5180822 .. 5180834 -  -3.3  -2.84634   TGGCACACCATGATA                TCCAG CAC CGGGA                GGGATTATTCCTGCG  42 30
C2U40_RS24370 5180654 .. 5180672 -   -16  -4.68705   ACAAGGTCAATAAAA             CGGCGCCA TCA TGGCGCCG             TTTTCATGCTCCCCG 100 51
C2U40_RS24335 5171567 .. 5171585 -  -7.4  -2.74248   GAAGAGGGGCCAAAT             GCCGGT GCAAGCG ACCGGC             GAAAAAAAAGATGCA  57 57
C2U40_RS24330 NONE
C2U40_RS24325 5169010 .. 5169024 -  -2.8  -3.03441   GAGCATGGGGTAATA               GGCAAT CAT ATTGCT               TCCTTGTCGTTGTCG  43 16
C2U40_RS24320 5168584 .. 5168609 - -13.3  -2.82161   AAATGCAGAATATGA         TGTGGAGGGGA TGGC TCCCCTCCACC          AGGCAGGTATTTTTT  81 48
C2U40_RS24315 5167305 .. 5167333 - -16.1  -3.80746   TGCTCAAAAAGAATA        CAAAAAGCCGGGC TTG GCCCGGCTTTTTC        TGCGGTGCTCAGCTG 100 34
C2U40_RS24130 5144939 .. 5144968 - -20.9  -3.07935   AGTGGATTGATTGAA       CGAAGGGCGTATC CGTG GATACGCCCTTCG        CATGTCAGGCTTGCG 100 30
        greB NONE
C2U40_RS24110 5139593 .. 5139606 -  -9.5  -5.30686   AACAGCGACAAAAAA               GCCCC TCGC GGGGC                TTTTTGCATTCTAGG 100 44
C2U40_RS24085 NONE
C2U40_RS24080 5135856 .. 5135877 - -18.7  -4.34267   CCACAGAATGCAAAA           GGCCCCGCC AGCT GGCGGGGCC            TTTTCTTTGCTGCAA 100 51
C2U40_RS24060 NONE
C2U40_RS24055 5130608 .. 5130624 - -12.3  -5.14563   GCGGCGATCAAAAAA              GCCTGCA TCA TGCAGGC              TCTTCTGGATGGCAG 100 63
C2U40_RS24045 5128736 .. 5128759 - -18.2  -3.33696   CCGTTTGCCAAGCAA          GCAGGCCACC CTCG GGTGGCCTGC           TCTGTTTTGGCTGCA 100 58
C2U40_RS24025 5124112 .. 5124141 - -15.2   -2.7169   AATCGTCATAAAGAT       GAAAAAGGCCTC ACATTG GAGGCCTTTTTC        CGCACGGTTGCGATC  95 39
C2U40_RS24020 5122597 .. 5122627 - -22.7  -2.71731   CGGAGCCCCCAATGA       CAAGGGCCTGCCG ATGTG CGGCAGGCCCTTG       TGAGGATCCCTGAGG 100 57
C2U40_RS24015 NONE
C2U40_RS24010 5118244 .. 5118274 - -14.8  -3.14132   GCTGGCTCCCATCAA       GCAACAAGGCCTCA TCG CGAGGCCTTGTTGT       TTTCTATCGGCTAGC  95 36
C2U40_RS24000 5116236 .. 5116256 -  -5.4  -3.19246   TGAACCTCAACGTAA           GCCAGGCCG GCGG CAGCCTG-C            TGGTGGTCTCCCAGT  48 232
        glnA 5109981 .. 5109996 - -11.8  -5.39721   CTATCAGAGAAAAAA              CCCGCC TGTC GGCGGG               TTTGGTCAAGTTCTG 100 55
C2U40_RS23970 5109308 .. 5109324 - -10.9  -3.26545   GCTATACACCAGCAA              TGCACCA ATG TGGTGCA              TTTAGTCTACCCGTA  74 54
C2U40_RS23965 NONE
C2U40_RS23960 5106713 .. 5106734 - -14.5  -3.66769   ATCTCAAAAAAGATA           CCCCGTTTG AAAT CAAACGGGG            TCTTATTGGTCGGTG 100 80
C2U40_RS23955 5105599 .. 5105628 - -16.7  -4.07885   GATGTCGTTGGAAAA       TAAAAAAACCGCC GAGA GGCGGTTTTTTTA        TTTGGGTTTGCCCGT 100 43
C2U40_RS23925 5100839 .. 5100878 -  -9.3  -2.84013   CAAGCAGACTGAAAG  CCTTTCAATCAGCGGAG GAGCTG CTCCGCCAATTGCAGGG   TTTGGTTGTGGTGTA  65 54
C2U40_RS23875 NONE
C2U40_RS23870 NONE
C2U40_RS23865 5090407 .. 5090428 - -11.5  -3.14344   GATGTTGGGCAGTAA           TGGGTGCCG CAAG CGGCACCCG            TCGTGATGATGGCCC  77 44
C2U40_RS23860 5088857 .. 5088892 - -11.2  -4.42386   CGTTGATTGACAAAA    GACCCGG-ACAATCCCT GGT AGAGGCTGTGCCGGGTC    TGGGTTGTGCTGCCT  93 56
C2U40_RS23855 5087307 .. 5087331 - -20.1  -3.67597   TGCTTCATGCAACAA          GAAGGGCAGCC AGT GGCTGCCCTTC          TGCATTGCTTCGTCT 100 78
C2U40_RS23840 5085027 .. 5085061 - -18.1  -3.10905   GCATAAGCCAGGCAA    GCATGACAAAGGGGCC CACG GGCCCCTTTGTCAT-C     TCCGGGATTTGGGCT 100 40
C2U40_RS23805 5077593 .. 5077632 -  -6.3  -3.53091   ATCCGGCGGGGCAAA  CCG-TACCGCAAGCGCGG GCCAT CGGCGCCTGCCGAAGCGG  AGGCCGGCACGAAGA  58 93
C2U40_RS23800 5075927 .. 5075942 -  -3.2  -3.50447   CCAATTCGCAGATAA              GCGTCA TTTC TGATGC               TATTCGAGCTGGATC  49 25
C2U40_RS23795 NONE
        rarD 5074568 .. 5074579 -  -5.8  -3.69621   ATTGATAACCTGAAA                CCCA TGGG TGGG                 CTTGTAGATTATTGC  60 61
C2U40_RS23785 NONE
C2U40_RS23780 5072954 .. 5072977 - -16.8    -3.827   AACAATGAACGCAAA          GAGGGATGGC CTGG GCCATCCCTC           TTTTTCATGGCTGGC 100 50
C2U40_RS23770 5067115 .. 5067146 -   -13   -3.2794   GCCGAGCCAGAGTAA      CGCTCCCC-CCGCGA TTG CCACGATGGGGAGCG      ACCATTTTCGATTCA  89 168
C2U40_RS23765 5066010 .. 5066032 - -19.2  -4.15044   GTGCTTGCCAATAAA           CAACGGGGGC TTG GCCCCCGTTG           TTGTTTCGATGGCTC 100 46
C2U40_RS23750 5062830 .. 5062848 -  -6.7  -3.25823   CGCCGGCCACAGCAA            GGTGG-GC AGCT GCTCCACC             AATTTCGGTGGCGCC  55 194
C2U40_RS23740 5061340 .. 5061366 - -12.9  -2.95204   TCAGGGGGAAACAAG         CGGCCCCGGAC TGGGC GCACGGGGCCG         GGAATGGGCGTCTTG  82 64
C2U40_RS23735 NONE
C2U40_RS23730 5060214 .. 5060236 - -17.8  -4.82901   GGCCCCGCATAAAAA           GAGCCTGCCA CTG TGGCAGGCTC           TGTCGTTTTCGGGGT 100 54
        ydfZ 5059131 .. 5059160 - -15.7  -3.91144   GGTAGAGCGCAGAAA       CCCGGCCACTGACG GGG CG-CGGTGGCCGGG       TGAATTGTAAAGAGT 100 64
C2U40_RS23715 5057421 .. 5057457 -  -4.3  -3.31931   GTACATAACGATCAA    GGGCAATCGGGCTGG ATCCCGG CCAGCGCCATCGCGC    GCGTCTCTTGAGGTC  51 133
C2U40_RS23705 5056058 .. 5056085 - -12.6  -3.64755   AGAGAGGCGCAACAA        GGGCGGCAGGGC CTTG ACCCGACCGCCC         GGTGCCGCGGTGGCC  88 40
C2U40_RS23700 5054900 .. 5054916 -  -4.3  -4.07568   CGCCTCGGCCGAAAA              GCCAAGC ATA GCCTTGC              CTCACTTCGATCTGC  62 169
C2U40_RS23695 5054211 .. 5054235 -   -10  -2.78816   CGATCTTTTAGTAGA          TGGCGTAGCT GGTGA AGCTACGCCG          TTTTCTTTAATTGAA  67 133
C2U40_RS23690 5052721 .. 5052744 - -18.2  -4.36914   TGCCTTTTGATAAAA          CCAACCCGGC TTAG GCCGGGTTGG           TTTATATATCATAGC 100 90
C2U40_RS23680 5049050 .. 5049067 - -14.1  -4.91573   AAAAGAGACTAAAAA             CCGGCCC GTGC GGGCCGG              TCGTTGGGTTGAGAG 100 54
C2U40_RS23675 NONE
C2U40_RS23670 NONE
C2U40_RS23665 5045224 .. 5045241 - -14.1   -5.4505   TCGCTCAATAAAAAA             GGCCCGC ATGT GCGGGCC              TTTTGCATGGCATGA 100 50
C2U40_RS23655 NONE
        fghA 5042143 .. 5042161 -   -16  -5.31877   ACCGACCAGAAAAAA             CAGGCCCG TCA CGGGCCTG             TTTCGATCAGAGGTG 100 32
C2U40_RS23640 5038838 .. 5038860 - -19.2  -5.24129   GGTCCGGATAAAAAA           GAGGGAGGCC ATG GGCCTCCCTC           TTTCGTTTGTCGCCT 100 43
C2U40_RS23565 5022636 .. 5022663 - -16.4  -3.90092   ATAGCTATATAAGAA        GAGAAGCCCGGCA TGA TGCCGGGCTTC-C        TGTTTGTGGTGGCGG 100 45
C2U40_RS23550 5018754 .. 5018776 - -20.6   -4.3208   CGCGAGAATTGAAAA           CGGGCCGCTC CAT GAGCGGCCCG           TTTGTTTGGGTCAGT 100 48
C2U40_RS23525 NONE
C2U40_RS23520 5013091 .. 5013113 - -10.5  -4.08767   CTGATGGGGCGAAAA           GGGCGCCAG CATAC CCAGCGCCC           GTACGGATGAAAAGA  88 47
        trmL 5012365 .. 5012378 -  -2.3  -2.74701   AGATGCGCAACAGCA               TGCTG GTGG CGGCA                CTGTGCGGCTTCTTC  39 243
C2U40_RS23500 5010092 .. 5010108 -  -2.9  -3.14344   CACCCGTTTCATCAA              GGGTAAC CGG ATGACCC              GTTTCTATGCCCTCT  44 232
C2U40_RS23490 5009600 .. 5009618 -   -16  -3.72695   ATCCTTGCCACGAAA             CGGCCTCC TGC GGAGGCCG             TTTCGTTTCTGTACT 100 111
C2U40_RS23480 5006291 .. 5006307 - -13.7  -5.14563   CCTGTCATGAAAAAA              GGCCGCA TGT TGCGGCC              TTTTTTATGGTGTCG 100 52
C2U40_RS23465 5004243 .. 5004280 - -13.6  -4.11216   TTTTCATTTCTAAAA  CAGCGAGCGGGCC-CG-GA TGA TCTCGCGGCCCGCTCG-TG  GTGACGGGAGATTAC 100 37
C2U40_RS23460 5003549 .. 5003571 - -20.6  -3.10344   CGCGCATTGAATACA           CAGGCGGGCC TCG GGCCCGCCTG           TTTTTTTGGGCGGCT 100 470
        cmtB 5000613 .. 5000628 -  -3.9  -3.67597   GGCGCCACTCAATAA              CGCGC CAGGAT GCGCA               GGATGTCGTCTTTGC  53 3
C2U40_RS23430 5000248 .. 5000266 -  -8.1  -3.16267   TCCAAGCAGATGGAA            GCGG-CGG CTCA CCGGCCGC             CCAGACAGTCGCAAA  61 45
C2U40_RS23425 4998924 .. 4998942 -   -16  -5.72616   ACGGATATAAAAAAA             CGGAGCGC ATG GCGCTCCG             TTTTTGTTTGTCGTG 100 52
C2U40_RS23410 4995439 .. 4995463 - -20.1  -2.54371   AATGATGTGAATGCA          GACAGGGCCCT TGA AGGGCCCTGTC          TCGTATGAGGGGAAG 100 50
C2U40_RS23400 4993639 .. 4993660 - -14.5  -3.72576   GCTCCTTGCAGCAAA           CAGGCTACC CTCG GGTAGCCTG            TTTCGTTGTTACTTG 100 34
       coaBC NONE
C2U40_RS23360 4988041 .. 4988060 -  -2.1  -2.67047   CCTAAAAAAACAATG            GCCTGAT TCTGTT ATTAGGC             ACCGCCGCGCGGGCA  38 52
C2U40_RS23355 4987347 .. 4987364 - -10.5  -4.72201   TGCCACAAAAAACAA             GGGAGGC CAAG GCCCCCC              TCTTTACTGCAACCC 100 83
C2U40_RS23350 4986352 .. 4986382 - -14.9  -3.55071   TCAGAGGGCCGGAAA      CGACAATGCCAGCC CGGA GGCTGGCATTGT-G       TCATTCAGGAAAAGG 100 42
C2U40_RS23340 4985701 .. 4985714 -  -6.7  -3.14881   CAAGTTGTGTATGAA               CCTTG CAGG CAAGG                CTCCCGCCAAACCTT  57 138
C2U40_RS23335 4983973 .. 4983993 - -18.3  -5.24129   CCCGGCCACAAAAAA            GCCCCGCTC ATC GAGCGGGGC            TTTTGCATTCAGAAA 100 52
C2U40_RS23325 4981197 .. 4981223 -  -6.5  -3.16564   GCTGGAGCTGAGCAA        TCCCGATCTGCC GGCT GGCAG-CCGGGC         CATGATGCAGGATCC  53 75
C2U40_RS23315 4980017 .. 4980027 -  -6.8  -3.05844   GGTGCCAGTGTAATA                 CGCT TTC AGCG                 CCGGTTCTGTGACCG  56 49
C2U40_RS23310 4977327 .. 4977346 -   -15  -4.06786   ACCCAACACGAGAAA            CCCCGCTC ATCT GAGCGGGG             TTTTTTATTGTCTAA 100 81
C2U40_RS23285 4970999 .. 4971030 - -14.4  -2.96722   CCCAGACCCAGAAAC      TGACAGCCCCCTTG CAAG CTTGGGGGCTGTCA       TCACTCGAAGAGGTC  90 68
C2U40_RS23265 NONE
C2U40_RS23260 4965779 .. 4965796 - -12.7  -4.56597   TCTGGTTGGCAAAAA             GAGCCGG CAAG CCGGCTC              AGAATTTTTCGGGTC 100 24
        purE NONE
C2U40_RS23250 4964058 .. 4964078 - -14.7  -4.50193   AGCAAGCAATGAAAA            GACCCGGGC CTG ACCCGGGTC            TTTTTTTGTGCGCGG 100 49
C2U40_RS23230 4959548 .. 4959572 - -17.3  -4.41494   GAGCCGGAATGAAAA          TGAAGGCATGC CGG GCATGCCTTCA          TGGATGGTCAACCGT 100 33
C2U40_RS23215 4954118 .. 4954133 - -11.8  -3.59979   TCCTGTGATTGCAAA              GGGCCC CGCA GGGCCC               CGAATACTGTGCGTC  85 48
C2U40_RS23210 4953387 .. 4953408 -  -2.1  -3.68435   TTCGGCAAAACAACA           CCGCCACTC GACC GGGTGGTGA            AGGTAGTACCAGCAC  49 48
C2U40_RS23205 NONE
C2U40_RS23200 NONE
C2U40_RS23195 4948349 .. 4948382 -  -7.3  -2.73364   TGTCGACTTCAACTA     CGCCCACACCTGG GTCTCCTA CCTGGTGCTGGCG      AGCATGCTGGAGGCG  52 237
C2U40_RS23185 4946176 .. 4946203 -  -6.9  -2.81547   GGTGGATACCAACGA        GCTCTCCTCCA AGACCA TGGAGGCGCGC         AAGGTGGCCGGTCTC  49 326
C2U40_RS23170 4942222 .. 4942244 -  -7.7  -3.14132   CGCGGCGTGCACGAA           GGCTGCATC GAGCA GATGCAGCG           GCTGTTTGCCACCAA  56 306
C2U40_RS23160 4940282 .. 4940301 - -13.6   -4.2693   AAGGGATGAAAACAA            TGACCGCC TCTC GGCGGTCA             CGGTGTTTTCTTTGG 100 146
        trpS NONE
C2U40_RS23145 NONE
C2U40_RS23140 4937025 .. 4937041 - -15.1  -5.64274   GTAGGCATAAAAAAA              CCGGCGC AGA GCGCCGG              TAGAAGGGACAAATC 100 111
C2U40_RS23130 4935362 .. 4935390 -  -5.2  -3.14211   ATCGTGCGTCACGAA       CTGCGGCGGGAAG ATCC CTTCGC-CCGCTG        GGACGAAGACGGCTT  48 268
C2U40_RS23115 4932680 .. 4932696 -  -2.1  -2.64616   GCGTCACCCACATCA              GCCGCCA TTC TGTCTGC              CGCCGTGTGGGCGGG  38 60
C2U40_RS23110 NONE
C2U40_RS23105 4931435 .. 4931462 - -15.6  -3.32294   GTAAATGGGGGAGAA        CAGTCGGCACCC GGGC GGGCGCCGACTA         TAAGAAATAACTGAC 100 41
C2U40_RS23100 4929197 .. 4929221 - -12.2  -3.04398   TTGTCTCTTGAAAAG         CAGCAGGCGGC TTGC GCCGCCTG-TG          GTCAGTTTTTCTGTC  79 27
C2U40_RS23095 NONE
C2U40_RS23090 4927159 .. 4927188 - -12.9  -3.95584   GGGTTACGAATGAAA       GCGGGAGCAGT GTACAGCA ACCGCTCCCGC        GACCCCATTTATTTA 100 64
C2U40_RS23085 4926224 .. 4926240 -    -8  -4.19506   AGCTGAACCTGAAAA              GCCTCA TTTGG TGAGGC              ATTAGGCAACAAGAA  76 106
C2U40_RS23050 NONE
C2U40_RS23045 4919982 .. 4920004 - -19.2  -4.84359   TTAGCGTGATAAAAA           CAAGGCCCCG AAA CGGGGCCTTG           TTGATTAGGAACGGT 100 43
C2U40_RS23040 4917907 .. 4917931 -  -6.4  -3.88291   CATGATGGGGATAAA         GCGGCTGGCTC ACAA GAGCCAGT-GC          TCAGTTATGTTGGAT  65 26
C2U40_RS23035 4916357 .. 4916372 - -11.8  -5.14563   GCTGCGATCAAAAAA              CCCGGC CTGA GCCGGG               TTTGGTAACAAGTTG 100 159
C2U40_RS23030 NONE
C2U40_RS23025 NONE
        kdpB 4912290 .. 4912304 -  -3.4  -2.78384   GGCGTTTTCATCACA               CCAGCC CCA GCCCGG               TGATGACCAGGTCGA  41 6
C2U40_RS23015 4911569 .. 4911581 -  -4.8  -3.53012   CCCCCGTTGTCGAAA                GGGA GCCTG TCCC                GAACTACAAGGAGCT  53 44
C2U40_RS23010 NONE
C2U40_RS23005 4908100 .. 4908129 -  -6.4  -3.59979   TCGTTCCACGTGAAA       CATCAGCTGCCG ATAAAA CGGTAACCGATG        CCGGATTCAGTTTCG  60 90
C2U40_RS22995 4905998 .. 4906010 -  -4.7  -2.94099   CTGGCGCAGGAGATA                GCGGC CCA GCAGC                AGCAGGCCTCCCATG  47 68
C2U40_RS22985 4904307 .. 4904332 - -19.1  -4.06419   GCGCGTGATAAACAA         GAGAGGCCTGC ATGT GCAGGCCTCTC          TGTTTTTGTATCGCC 100 49
C2U40_RS22970 4902702 .. 4902717 -  -2.4  -2.78384   CCCTTGCTGATGAGA              TGACGC ATCG GCGCCG               ACCCCGTCAGCATGG  39 53
C2U40_RS22965 4902213 .. 4902229 -  -9.4  -5.71712   CTCGATATAAAAAAA              CCGCTC CCTGT GAGCGG              CTTTTTGTTTTCCTG 100 96
C2U40_RS22940 NONE
C2U40_RS22935 NONE
C2U40_RS22930 4893664 .. 4893678 - -12.8   -5.4505   TCCTCCAATAAAAAA               GGCGGC AAT GCCGCC               AAAGAGAGAGCTATT 100 36
C2U40_RS22925 NONE
C2U40_RS22920 NONE
C2U40_RS22915 NONE
C2U40_RS22910 4891009 .. 4891026 - -14.1  -5.46657   CATTGTAATAAAAAA             GGCGGCC CGAA GGCCGCC              TCTTTTGTCATCCAT 100 58
C2U40_RS22905 4889428 .. 4889480 - -17.2  -3.31144   TGCTGATCTTCATAA GTGTCCCCCGAGAGTACCCCAAGAG GTTA CT-TTGGGGTACTCTCGGGGTAAAT TCTCACGAAACAAGA 100 133
C2U40_RS22900 4888216 .. 4888239 -   -16  -2.66522   ATCTAAGATAATCTA          GGCCAGCGCA TGGT CGCGCTGGCC           TATTTGTTGGTTCTT 100 69
C2U40_RS22875 4884925 .. 4884936 -  -3.6  -4.16279   GAGATGATGCCAAAA                CCGG ATAG CCGA                 ACAGCGGTAGGCAAT  61 131
C2U40_RS22865 4881100 .. 4881124 -  -4.2  -2.65442   AGATGACCGAGATGA          CTAGGCCACT ACATG AGTGGCCTTT          TGCTTAAGGCGTGTC  43 49
C2U40_RS22810 NONE
C2U40_RS22805 4866655 .. 4866704 -    -8  -3.14878   GGCGGGAAGTGAATA TCTCACGTTGCTTGCATGAGGCGC TGGG GCGCCCCATGCAA-CA-CGTAATT GGGACATAGCCTTTT  61 409
C2U40_RS22770 4856888 .. 4856908 -  -6.9  -3.46914   AGGATCCACTAAATA            GATCTTAAG GAT CTTTAGATC            GATCTTTTATTGGAT  61 382
C2U40_RS22765 NONE
C2U40_RS22760 NONE
C2U40_RS22755 NONE
C2U40_RS22750 4852311 .. 4852321 -  -6.8  -5.11033   CAGAACTGTAAAAAA                 TCGG GAT CCGA                 AGACCCCGCGTTTAC  90 188
C2U40_RS22745 NONE
C2U40_RS22740 NONE
C2U40_RS22735 NONE
C2U40_RS22730 NONE
C2U40_RS22725 NONE
        atpA NONE
C2U40_RS22715 NONE
        atpD 4845797 .. 4845807 -  -5.4  -2.75963   ACGTCCAGGTGAAAG                 GAGA TCA TCTC                 TGCCATGGGCCCTCC  48 50
        atpC 4845352 .. 4845367 - -10.4  -6.17184   ACGAGTAAAAAAAAA              GCGACC CGCA GGTCGC               TTTTTACCTCACCGT 100 43
        glmU 4843887 .. 4843906 - -16.4  -5.10933   GTACTGAAAACAAAA            CCGGCGCC ATCA GGCGCCGG             TTTGCATTTCATTGA 100 48
C2U40_RS22675 4838506 .. 4838519 -  -3.7  -3.59979   TTTGTTCAGGTCAAA               CGGCC ACGG GGGCG                CAAATCAGCTGGATC  53 7
        glmS 4836477 .. 4836490 -  -2.3  -2.80873   AGCCATGAAAAAACC               GCCCA GCCA TTGGC                TCATAAATTGAGCTT  39 148
C2U40_RS22665 NONE
C2U40_RS22660 NONE
C2U40_RS22655 4831890 .. 4831906 -  -2.9  -3.67417   ATAGGGAACCGGAAA              GTTCAGC ATG GCTAACC              CATCCTTCTCAACCA  51 20
C2U40_RS22650 NONE
C2U40_RS22645 4828681 .. 4828718 -  -4.3  -2.91582   GATGTGATCCATATA   GCGCCATCATTGTCATCA AAT TGATTACAATCATG-CAC   CATCTTTACTATAAC  47 102
C2U40_RS22640 NONE
C2U40_RS22635 NONE
C2U40_RS22630 NONE
C2U40_RS22625 NONE
C2U40_RS22620 NONE
C2U40_RS22615 NONE
C2U40_RS22610 4816337 .. 4816353 - -13.7  -5.42975   CCAGACAAACAAAAA              GAGCCGC AAT GCGGCTC              TTGTATGCAAGTAAT 100 501
C2U40_RS22600 NONE
C2U40_RS22595 NONE
C2U40_RS22590 NONE
C2U40_RS22585 NONE
C2U40_RS22580 4811653 .. 4811666 -  -3.1  -2.79302   ACCAGGGCCAGCACA               CAGAT CCAG ATCCG                CAACATAGTTATGAC  41 34
C2U40_RS22575 4810455 .. 4810491 - -10.1  -4.56597   TCGTTTGCTGAAAAA    GCAGGCTGAAGCCTCTA AAA CAAGGGCTTCAGCCCTC    TTTTACGCCGCTTTT  93 28
C2U40_RS22570 4808450 .. 4808471 -  -8.7  -3.05069   TTCACCAAACAAGCA           CTGACACGC CAAG GCGCATCAG            GTCTTTGCTCTAACT  62 88
C2U40_RS22565 4808208 .. 4808236 - -14.1  -4.65747   CAAGGCCGAAGAAAA        CAGACATAAACAT GTG ATGCTTATGTCTG        CATTCTTGTTAGCAA 100 50
C2U40_RS22560 NONE
         rrf 4804848 .. 4804860 -  -9.1  -2.62667   CTAACCGGTAAAGAC                CGCAC TGT GTGCG                CTATCTAAATCTTCT  62 101
C2U40_RS22550 4804724 .. 4804741 - -12.7  -5.37043   AGCGGATACAAAAAA             GCCTCCC GATT GGGAGGC              TTTAATATTTAATGG 100 38
C2U40_RS22540 4803024 .. 4803056 -  -8.5  -2.62396   CACGCCTCCATAGTA     TCGGGCC-GACATT ATGCAA AATGTCAGGCCCGG      GGGACAGCAGGGCAA  59 60
C2U40_RS22535 NONE
C2U40_RS22530 NONE
C2U40_RS22525 NONE
        ubiB 4799530 .. 4799543 -  -9.5  -2.52623   TTCTCTCCAGAACAG               GCGCC TGCT GGCGC                AGTTTATTTAATGAG  62 33
C2U40_RS22515 4799256 .. 4799270 -  -2.1  -3.15236   GAAACCGATATCGAA              CATGGC TTAG GCC-TG               ATCTTTATCTTTCTG  43 17
C2U40_RS22510 NONE
        tatC 4798050 .. 4798077 -   -12  -4.30844   ACGGGAGCATGAAAA        GAGGAAGGGAGC CTTA GCTCCCCTCTTC         AGTCTGTTCCTGCTT  95 11
C2U40_RS22500 4797169 .. 4797179 -  -3.2  -2.79098   TGTAGCCATGAATCA                 CTCC TGA AGAG                 GAAGTTGGAAGAACG  41 12
C2U40_RS22495 4796089 .. 4796124 - -17.6  -3.60296   GATCCGGATGCCAAA    GACGACAATGCCGGCC CAGG GGCCGGCATTGTCGGT     GACATCAGGCAAGAT 100 44
C2U40_RS22490 4793777 .. 4793792 - -10.4  -4.39002   AAAGCCTTGAGAAAA              GGGACC AAAA GGTCCC               TTTTTATCTCAAAAA  90 111
C2U40_RS22485 4791079 .. 4791102 -  -4.4  -2.79796   GCGGAGTGTACCACA          GCCCCCGAAG GTCG CTGTAGGGGC           ACCGGCCGAAGGAGG  46 53
C2U40_RS22480 4790239 .. 4790262 - -18.2  -3.09648   CAATAGATGGCAAGA          GGGCCAACCC CGCC GGGTTGGCCC           TCTTCTTTTATCCCT 100 52
C2U40_RS22455 4785480 .. 4785504 - -15.1  -4.02581   GGTGATAAAACAGAA          GGAGCGCATTA TTG CAATGCGCTCC          TCTTTGATTATTACA 100 36
         rho 4784004 .. 4784021 - -10.5   -5.4433   ATAGATAAACAAAAA             CCGCGAC CTGG GCCGCGG              TTTGATGATTTTCGA 100 46
C2U40_RS22445 NONE
C2U40_RS22440 NONE
C2U40_RS22435 4780449 .. 4780475 - -15.2  -3.86015   CAGGTCGCCCATAAA         GCAAACCCCAGC CAG GCTGGGGTTTGT         TGTTTGTGGCCTGCC 100 111
C2U40_RS22425 4777401 .. 4777430 - -16.5  -4.09685   CGCGATGCTGGAAAA       CAAAACGCCGCCC CGAG GGGCGGCGTTTTT        ATTGGCCGACTGGCT 100 40
C2U40_RS22410 4775278 .. 4775306 -  -7.4  -3.29511   CTCAGGCGGGGAGAA       CCGCTAG-CAGAG GTGG CGCTGGCCAGCGG        TTTTGCCGATCAGGC  58 116
C2U40_RS22375 4768210 .. 4768229 -   -15  -5.27335   CGGGCCAAACAAAAA            CCCCCTCG CTGG CGAGGGGG             TTTTCTTGTTGATGG 100 57
C2U40_RS22360 4764242 .. 4764261 -   -15  -5.33405   CCCATCAAACAAAAA            CCCCCTCG CTGG CGAGGGGG             TTGGCATACGCAACA 100 55
C2U40_RS22350 NONE
C2U40_RS22345 NONE
C2U40_RS22340 NONE
C2U40_RS22335 4758115 .. 4758156 -  -6.6  -2.87211   AGCCCTTCGCAGACA GCCTGCAACTGGCTCCTTG TGACT CAATGAGTGAGTTGC-GGC AGCAGTTGCAGCAGG  54 7
C2U40_RS22330 4756570 .. 4756587 - -14.1  -4.27584   ATTTTGAACGCAAAA             CGGCGCC ATCA GGCGCCG              TTTTTTGTCGCAGTC 100 62
C2U40_RS22325 4756090 .. 4756121 - -13.9  -4.79667   AAAACCTAGTAAAAA      CAATGCCAGTCAG GCTTAA CTGACTGGCATTA       CGCCATCAGGCGCCT 100 62
C2U40_RS22310 4752447 .. 4752472 - -16.3  -3.10164   CTACTCACCATGTAA         TAACGGACACC CAGA GGTGTCCGTTA          TTACATGCAGTTTCC 100 55
C2U40_RS22285 4748668 .. 4748697 -  -7.1  -2.57132   CTCTCCCGCCATAAC       CGCCAGCCGAA CTTCCCCT CCCGGCTGGCA        CGCTTTCTCAACGGA  52 115
C2U40_RS22280 4748007 .. 4748035 - -13.9  -2.81951   GTATTAATATATAAG        GAAGGTGCGAACA AGT TGCTCGCGCCTTC        ATCATAAGCAATCTC  85 259
C2U40_RS22265 4743430 .. 4743447 - -12.7   -4.2349   TGCCGATATGCAAAA             GGGAGGC ATCA GCCTCCC              TTCTCTTTTGCCTTG  95 49
C2U40_RS22255 4740391 .. 4740424 - -19.7  -3.31322   CGCAACGCCGGATAA     CAAAAGGCCCCGCCA TCGC TGGCGGGGCCTTTTT      CATGGCTGCGAACCG 100 47
C2U40_RS22240 4739344 .. 4739376 - -20.8  -3.85698   CGCGGCGGCCAGAAA      CGACAAAGGCGGAT GAGAT ATCCGCCTTTGTCG      TTATGAAAGTATTGG 100 43
C2U40_RS22205 NONE
C2U40_RS22200 NONE
C2U40_RS22195 NONE
C2U40_RS22190 4725863 .. 4725878 -  -2.4  -5.10461   TTTATCCAACAAAAA              GCCCCG CAAC CGCAGC               GAACAGGCCATTCAG  74 53
C2U40_RS22185 4723803 .. 4723824 -  -8.7  -3.05069   TTCACCAAACAAGCA           CTGACACGC CAAG GCGCATCAG            GTCTTTGCTCTAACT  62 88
C2U40_RS22180 4723561 .. 4723589 - -14.1  -4.65747   CAAGGCCGAAGAAAA        CAGACATAAACAT GTG ATGCTTATGTCTG        CATTCTTGTTAGCAA 100 50
C2U40_RS22175 NONE
         rrf 4720189 .. 4720199 -  -2.4  -2.76189   TAACCGACTGAACTA                 CCGC TCC GCTG                 TCTGGTTAGCTTTTT  39 120
C2U40_RS22165 4720088 .. 4720107 - -13.6  -5.72207   CGGAAACGAAAAAAA            GCCCAGTC GTTA GACTGGGC             TTCTTAAGTAGTGGC 100 37
C2U40_RS22160 4719044 .. 4719075 -   -16  -3.53733   GGGACTTGAGAAACA      CT-TGAGCCCGTCGC GAG GCAACGGGCTCAGAG      CTATCGTGTTGGCGA 100 85
C2U40_RS22145 4714835 .. 4714855 -    -6   -3.1634   GTTGAAATCATCGAA            TCCGAGGG GATAG CCCCCGGC            TATCTGATCTTCGAG  51 447
C2U40_RS22115 4708086 .. 4708107 - -10.1  -3.53563   ACATGGCGGTGTAAA           GCTCACCCG TTAG CGGTTGAGC            CACGCCATATAATCC  74 13
C2U40_RS22110 4706222 .. 4706235 -  -3.1  -3.21099   TCTGCTGAGCATCAA               TCAAG ACTT CCTGA                AGACATAGTTACCCC  45 12
C2U40_RS22105 NONE
C2U40_RS22100 4704323 .. 4704334 -  -7.2  -3.23853   GGCTGCCAACCAACA                GCCG CTGC CGGC                 ACGCCCAGTGCTATT  57 36
C2U40_RS22095 4703224 .. 4703246 -  -2.6  -2.58358   AAAGGATGATAACAG           GCTGACGC GACTAGA GCGCCATC           AGGGCATCGACCTGG  38 13
C2U40_RS22090 4702025 .. 4702062 -  -9.1  -4.08216   CCAGCTGCCGCAAAA   CGCGGAAAAGGACTTCA TCGA CGAAGCCCTGCTGCGCG    CCATCACGCCCGAGC  81 29
C2U40_RS22075 4698875 .. 4698890 -  -7.5  -5.60993   TGGGGTATAAAAAAA              CGCGG TCAATG CCGCG               TTTTTAAAATCAGGA 100 35
C2U40_RS22070 4698104 .. 4698140 - -19.5  -5.90981   GCAGATGAAAAAAAA    CGGCGCCCGTTTGCT GCCAGAG AGCCAACGGGCGCCG    CCTTCAACGATTGCG 100 57
C2U40_RS22065 NONE
        cueR 4695154 .. 4695164 -  -8.2  -2.87132   GCCTGCCGGCAGAGA                 CGGC TCA GCCG                 CGCTCCAGCTCGTCG  61 19
C2U40_RS22055 4693888 .. 4693902 -  -2.1  -3.11732   GTGAAACTCAGGCAA               CCTTA CCCAT CAAGG               CTACTTCGATACGAT  42 3
C2U40_RS22050 4693509 .. 4693534 -  -7.5   -5.5604   TCAAGCAACAAAAAA         GACGTATCGCC AGTT GACGAAACGCC          TTTTTGAGAGATTCT 100 77
        ccoG 4691922 .. 4691947 - -13.3  -4.10161   GATGACCGGCTAAAA         CCGGCCATGAC GGCG GTCACAGCCGG          CTGATGAACTTGCTT 100 16
C2U40_RS22040 NONE
C2U40_RS22035 4690067 .. 4690090 -   -16  -5.28942   GATGGCAAACAAAAA          GCCCGCCAGT TTGC ACCGGCGGGC           TTTTTTCATCGGGTC 100 49
C2U40_RS22020 4687388 .. 4687403 -  -3.2  -2.52519   CCAGCACACGAACAG              GGGATG CGCT CATGCC               TCCGCTCCGTTCATC  40 19
C2U40_RS22015 4686471 .. 4686484 -  -9.5  -3.14132   GTTTTTGCTGAGGAA               CCCGC ACCT GCGGG                GCAAGGACATCGAGA  67 459
C2U40_RS21995 4683122 .. 4683145 - -15.3  -5.75342   GTGGTCGAAAAAAAA          CCCCCGAGC TGTGAG GCTCGGGGG           TCGCTTGTTTCGTTC 100 56
C2U40_RS21990 NONE
C2U40_RS21985 NONE
C2U40_RS21980 4680167 .. 4680201 - -10.8  -2.53263   CGGATCGGGAATCGA    TCCTGGTGAGGGCAC AGCGCA GTGCCCTGACC-GGA     AGCGACTCGGGGAGG  69 62
C2U40_RS21975 NONE
        ilvA 4676688 .. 4676706 -   -16  -4.72986   CAGCGCCATGAAAAA             GGGAGGCC GAT GGCCTCCC             TCTTGCTGCTTGCAA 100 46
C2U40_RS21965 4675331 .. 4675348 - -12.7  -3.50853   TGGCGGCAATGAGAA             GGGAGGC CTGG GCCTCCC              TCGTCATTCAGCAGA  86 50
C2U40_RS21960 4673590 .. 4673627 -  -7.5  -3.14132   CGGTCGTGCCAGCAA   GCCGGGGCTGGTGGTGC TGCA GAGCCACCATCCCGAGC    ACGCCCTGCTGCAGG  56 494
C2U40_RS21950 4671396 .. 4671426 - -19.2  -3.17219   CAGAACGCCGACCAA       TAAAAAAGGCGCCC ATC GGGCGCCTTTTTCA       GAATTCTTCAGAAGT 100 45
C2U40_RS21945 4669736 .. 4669753 -  -6.3  -3.96148   GCTGGGGATCATAAA             GAAAACC ATCG GGCTTTC              ACAGAGGAAAGTATC  65 117
C2U40_RS21940 4668359 .. 4668379 - -15.4   -4.4078   TTCCCGTAATGAAAA            GGGGCCCC GACAT GGGGCCCC            TTCTGTTTTCTGCGC 100 53
C2U40_RS21915 4663365 .. 4663403 - -21.9  -4.59773   CCGGATCGGGAAAAA  GGCCAGTTTGCCAGCCCC CGCA GGAGCTGGCAAAC-GGCC   GGTCATGGTCCTCGA 100 52
C2U40_RS21910 4662788 .. 4662801 -  -3.9  -4.72986   GATCTTCATGAAAAA               CAAAA GCTT TTTTG                GCCGTATTCAGTAGT  70 33
C2U40_RS21905 NONE
C2U40_RS21900 NONE
C2U40_RS21895 NONE
C2U40_RS21890 NONE
C2U40_RS21885 4658158 .. 4658187 -  -7.2  -3.16564   CCTCGAGCTCATCAA      GCC-GCACCTGACC AAGG GATC-GGTGCTGGC       ATTCGATGAGCTCAA  56 137
C2U40_RS21850 NONE
C2U40_RS21845 NONE
C2U40_RS21840 NONE
C2U40_RS21835 NONE
C2U40_RS21830 NONE
C2U40_RS21825 4647623 .. 4647634 -  -2.2  -2.54186   AGATGGGAGAAAATG                GGCA AGGC TACC                 GCACGGTCCCTGTCA  38 134
C2U40_RS21820 NONE
         glf NONE
C2U40_RS21810 NONE
C2U40_RS21805 NONE
C2U40_RS21800 4640205 .. 4640245 -    -2  -4.08394   ATATTTTGTTTAAAA CTATCACTCCCTATTTCAC AATA ATTAATTAAGGAG-GATAG  TGTTATGAATCCTTC  56 148
C2U40_RS21795 NONE
C2U40_RS21790 4635363 .. 4635384 -  -5.8  -5.27206   CATATATAATAAAAA           GCCACCGC ATCTAA ACAGTGGC            CACTGATTTTATTTT  93 77
C2U40_RS21785 NONE
C2U40_RS21780 NONE
C2U40_RS21775 4631669 .. 4631696 - -15.8   -3.3341   AAAAATTTCTGATAA        TCATGAGTTACC CGAT GGTAACTCATGA         TTGTTCATAACACGC 100 20
C2U40_RS21715 4619112 .. 4619140 -    -3  -2.69471   TGAGGGGCAGACAAC       TCCCCCGGTCACG GTGA CGC-ACCGGGTGT        CGTGCAGTGCCTGCG  41 119
C2U40_RS21710 NONE
C2U40_RS21705 NONE
C2U40_RS21700 4615304 .. 4615327 - -11.7  -2.82717   ATCCATCAATACAAT          CTGGCGCCC CGGGAT GGGCGCCAA           GGTTAGGTTCCGGAT  73 28
C2U40_RS21695 NONE
C2U40_RS21690 NONE
C2U40_RS21685 NONE
C2U40_RS21680 4611534 .. 4611550 -  -6.5  -3.63515   CTTTACGCTCAATAA              TTCAGCG AGT CGCAGAA              AAAATCGCCCACAAG  60 59
C2U40_RS21675 4611322 .. 4611370 - -24.1  -3.01791   AGCTTTGCCTCAACA GACCAAATGCGAAAAGGCCGCTC ATT GAGCGGCCTTTTCAAATGTGGTC GGTGTGAGAGGATTC 100 21
C2U40_RS21660 4608030 .. 4608047 -  -3.3  -3.40403   TGCGGTCGATGACAA             GGTCTAC CAGG GCCGACC              CTACCGGCGGCAGTA  47 26
C2U40_RS21650 NONE
C2U40_RS21645 4605702 .. 4605720 - -11.8  -2.54896   GGGTTAGGGAACCCA             TATCGCCA CCA TGGCGATA             ATCGAGGGGCGGGAT  73 121
C2U40_RS21640 4604961 .. 4604984 - -15.4  -5.70829   AAGATCACAAAAAAA          TTGACCACCC ATGG GGGTGGTCAA           TCTCATCAGGCTTGT 100 31
C2U40_RS21575 4588507 .. 4588529 - -14.9  -3.27994   TCAATCCCATAGCAA           GACGCCTCC CCTGT GGAGGCGTC           TTCGTTTTCAGCGTT 100 33
C2U40_RS21550 NONE
C2U40_RS21545 NONE
C2U40_RS21540 4581416 .. 4581431 - -10.4  -4.73864   CCAAGCAACACAAAA              GGGACC CGAG GGTCCC               TTTTTTCATGCCGTG 100 94
C2U40_RS21505 4573547 .. 4573599 - -8.49999  -3.40403   TGTGCTGCAGTACAA GTTTGCCAGGT-GCAGCGCTTGCGCC GACG GGCGCAAGCGCTGCGATCAGG-AC-C TGACGGGAGCGACCG  65 18
        lacZ 4569832 .. 4569864 -  -3.3  -3.89822   TAGTTATGCGAGAAA      CCGCCTTTGGG TCTCGCCATCT CCCGACGGCGG      GTCCGGCTAGCCCAG  55 32
C2U40_RS21495 4568630 .. 4568652 - -14.9  -3.63922   ATCTGGTTGAAAAGA           GGGCAAGGG GATCT CCCTTGCCC           TGAGGGGAGGAATTA 100 38
C2U40_RS21490 NONE
C2U40_RS21485 4566032 .. 4566051 - -12.8  -4.32857   CCCTCCAAAGAGAAA            GGGCCGGA ATGA CCCGGCCC             TCCCTGCCAATGCTT 100 39
C2U40_RS21480 4563821 .. 4563835 -  -3.6  -5.06451   CATGATTTTAAAAAA               GATAAC TTC ATTATC               CTTTCTCGGGAAACC  79 464
        arcA NONE
        arcC NONE
        argF 4558232 .. 4558251 - -16.4  -4.10657   TCACATGGTCGAAAA            GCCGGGGG TCAC CCCCCGGC             ACCACTACTGCGACC 100 41
C2U40_RS21450 4556696 .. 4556714 -   -16  -5.28176   GTCAGCCATAAAAAA             CGGGAGCC AGT GGCTCCCG             TTTTCAGCTTTCTCT 100 51
C2U40_RS21425 4553319 .. 4553337 - -14.6   -4.4267   CCGGAAAAGCGAAAA             GCCAGCTC AAT GAGCTGGC             TTCTCTGAAAAATGG 100 38
C2U40_RS21420 4551647 .. 4551664 - -14.1  -4.05607   ACATGACAACAACAA             GGCCGCC CGCG GGCGGCC              TCCCATACTCTGCCC 100 48
C2U40_RS21415 4549499 .. 4549518 -   -15  -5.27335   GTCGTGAAATAAAAA            GGGCAGCC CGCG GGCTGCCC             TTTTTCATGGACGTT 100 51
C2U40_RS21390 4544193 .. 4544204 -  -3.6  -4.72272   CCTGGGCAGTAAAAA                GAGC ATTG GCCC                 TGACGGGTTACCAGG  73 268
C2U40_RS21380 NONE
C2U40_RS21375 4540726 .. 4540742 -  -4.4  -4.26881   GTCCAGAAAACGAAA              GGTTAC TGCAT GCAACC              ATGCTGATTACTGGA  64 258
C2U40_RS21315 NONE
C2U40_RS21310 NONE
C2U40_RS21305 NONE
C2U40_RS21300 NONE
C2U40_RS21295 NONE
C2U40_RS21290 NONE
C2U40_RS21285 NONE
C2U40_RS21280 NONE
C2U40_RS21275 NONE
C2U40_RS21270 4523582 .. 4523599 - -14.1  -4.99947   CCTAATCAAACAAAA             GGCCCGC AACT GCGGGCC              TTGTTCATTCTGTAT 100 49
C2U40_RS21260 4522891 .. 4522914 - -18.2  -4.24711   CAAAAGCGCAATAAA          CAAGGCCCGC AATA GCGGGCCTTG           TTGCATCTATCACGC 100 41
C2U40_RS21165 4513143 .. 4513157 - -11.4  -3.94344   ATCAGATAAAGATAA               TGGGGC TGG GCCCCA               CTTCCGCTACACCAT  90 101
C2U40_RS21155 4511095 .. 4511131 - -10.9  -3.68024   TTTTGTAACAGACAA   GGGGCCGGCTACCCGCC AAACG AGCGGAT--CCGGCCCC   TGCTATTTAATCGTT  81 69
        pntA NONE
C2U40_RS21145 4507606 .. 4507621 - -10.4   -5.5112   GTGAGTAATAAAAAA              GGAGGC CGGA GCCTCC               TTTTTTGCTTTCCTC 100 49
C2U40_RS21140 4506666 .. 4506685 -  -7.2  -2.59837   ACTCTAAAGCAATAG            GACTCAAA TAAA TTTGAGCC             ACTTCGCTTTTTGCG  52 136
C2U40_RS21135 4505150 .. 4505171 - -15.9   -2.7119   ACAGGCAGAAAAACG           GAGGGTGGC CTGC GCCACCCTC            TTGCATCACTCGGCC  95 31
C2U40_RS21130 4503535 .. 4503556 - -17.3  -3.05384   CTCCTTTCCATGCAA           CGGGGAGGG CATG CCCTCCCCG            CTCTCTTCATTGGTT 100 80
C2U40_RS21125 4502068 .. 4502086 -   -16  -4.90013   CAACGCAATGAAAAA             CCGGAGCC ACT GGCTCCGG             TTTTTTTATGGGCGC 100 125
C2U40_RS21115 4500033 .. 4500068 - -21.2  -4.52589   TTCCTTCATATAAAA    CGGGGCCCCTTGGCTG CAAC CAGTCAAGGGGCCCCA     TATCAGGTCATGCAG 100 149
        pgeF 4499227 .. 4499270 - -11.6  -2.74514   GCAAAGCGGGAAGCA GGC-AGGATCCCCGCCCGGCA AGA TGCAGGGCGGGGAGCGTCGTC AGGGCGCCAGCCAGA  73 24
C2U40_RS21105 4496486 .. 4496504 - -11.7  -5.07652   CCCCTGAAAACAAAA             CGCAGGC ACGAG GCCTGCG             TTTTTCATCGACAAT 100 45
C2U40_RS21100 4495443 .. 4495465 -   -12  -2.72094   AACGAATGAAAGCCA           TGCCGGCG CGATTGC CGCCGGCA           GGATAACAGGCAGGT  73 199
C2U40_RS21085 4493601 .. 4493628 -  -8.3  -3.14344   CACCGTCTGGACCAA        GGCCAGGGCCG ATGCCA CTACCCCGGCC         CTGATGGCGGCCTAC  58 219
C2U40_RS21075 4491962 .. 4491977 -  -3.2  -2.78935   AGATCCGCGATCACA              TGAGCC GTTC GACCCA               CTCCCTCACCCCGCA  40 389
C2U40_RS21065 4491123 .. 4491139 -  -7.2  -2.63596   GCTGACCCTAGATGA              CGGCCA GACCG CGGCCG              CCATCCACCCGGATG  52 1
        ynhF 4490339 .. 4490354 - -11.8  -4.77757   CCCCAAAAAGCAAAA              CCGGCC AGGG GGCCGG               TTCATGCTGCAGCTT 100 46
C2U40_RS21050 NONE
C2U40_RS21045 NONE
C2U40_RS21040 4487036 .. 4487068 - -30.7  -3.90744   TCCGGTCTGAAACAA      GAGGGGCGGCCCGTC ATC GACGGGCCGCCCCTC      TGTCATTTATCCCTT 100 32
C2U40_RS21030 4486157 .. 4486167 -  -2.4  -4.75308   AGCAACATGGAAAAA                 CTCC CGG GGCG                 ATGAGGGTAACAATC  68 79
C2U40_RS21025 NONE
C2U40_RS21020 4484440 .. 4484456 -  -9.4  -5.21709   GGTGACATCAAAAAA              GAGGCC GACTA GGCCTC              TTTTTTATTTCGGGT 100 65
C2U40_RS21010 NONE
C2U40_RS21005 4483061 .. 4483083 -  -3.3  -3.15346   AAGAGGGCATCAAGA           TCCGGCTCA TTCGT TGATCCGGT           AGCCAAGGCCGCGCA  45 9
C2U40_RS21000 NONE
C2U40_RS20995 4480979 .. 4480997 - -13.1  -5.14163   ACTGAGCAACAAAAA             CGGCGCC ATCAA GGCGCCG             TTTTCTTATCTCGGT 100 205
C2U40_RS20980 4474568 .. 4474614 -  -6.5  -3.14132   CCGGGGTGGTACTAA CCCTGCTCTGGATCGGCGTG TTCAAGTT CACGCCGACCGAG-GCGGCG GCCATCCGGCCGCTG  53 403
C2U40_RS20965 4473019 .. 4473040 - -14.4  -2.78596   CACCGGCTGATGACA           CCGGGGCC CGCCGC GGCCCCGG            TCATTCGCGCTGCCG  90 26
C2U40_RS20950 NONE
C2U40_RS20945 4468836 .. 4468851 - -11.8  -2.52291   AATCGACATGAAGAG              GGGGCC CGCA GGCCCC               TCTTCTATTCATGAC  72 55
C2U40_RS20935 NONE
C2U40_RS20930 NONE
         tuf 4466009 .. 4466025 - -12.3  -4.30719   CCCCTGCATAAGAAA              GCCCCTA TTA TAGGGGC              TTTGCTTTATTTATG 100 52
C2U40_RS20920 4465900 .. 4465918 -  -2.3  -4.74917   ACCAAAGACACAAAA             GCCCCGT ACGAG ACGAGGT             ATATGGCAGGGGCGG  68 29
C2U40_RS20915 NONE
        nusG 4464869 .. 4464901 -   -15   -4.3255   TCCCCAACTAATAAA      GGGGCAGCGAAT TATAATGAC ATTCGCTGCCCC      TGACAACCGTTAACG 100 53
        rplK NONE
C2U40_RS20900 4463612 .. 4463647 - -12.2  -2.61467   AAACCCCCAACCAAT    CAAGGCGCAAAATTATA GAT TA-AATTTTGCACCTTG    TAAAATCCATCAATT  76 39
C2U40_RS20895 4462884 .. 4462895 -  -5.8  -3.54626   GAATAAACTCAAACA                GCCT AAAT AGGC                 GAGAATCAAGCAGCA  58 31
C2U40_RS20890 4462423 .. 4462448 - -14.1  -4.64766   TCTACAGCGCAAAAA         GGCTGGTGAAC AAAA ATTCACCAGCC          CTAGCCTGTTTTATC 100 64
        rpoB 4458221 .. 4458236 -  -6.2  -3.63569   TCAATTCTCGAACAA              TAAGAG CGAG CTCTTA               CTCTTCGTCCAGCTC  60 23
        rpoC 4453796 .. 4453814 - -13.1  -5.56673   ATCGACAATAAAAAA             GGGCCCC ATGAA GGGGCCC             TTTTCATTCGCTACA 100 49
C2U40_RS20875 NONE
C2U40_RS20870 4452482 .. 4452499 - -12.7  -5.56264   GCCAAACACAAAAAA             GCCCCTC CTGG GAGGGGC              TCTTCGTGCAGCCTT 100 44
C2U40_RS20865 NONE
        tusC 4451684 .. 4451696 -  -3.4  -3.10537   CACCTCAAAAGCAGA                TGTG GGTAG CACA                GGCATCCCACTGGTG  43 2
        dsrH 4451380 .. 4451394 -  -7.1  -4.56961   AATAGTTATATAAAA               CTGGC GGTCA GCCAG               CCCAGGTCTGCGGCG  77 18
C2U40_RS20850 NONE
C2U40_RS20845 4450232 .. 4450259 -  -9.8  -3.02023   CCCAGATAATTAAAG        GTGCGCAGAGCC AAAA GACCCTGCGCAA         GCGGATTACCAGCGG  69 31
        fusA 4448052 .. 4448073 - -15.9  -3.59979   TCCTTCTAGGTTAAA           CCCGCCTAC CGTC GTAGGCGGG            GAATCTTAAATTACT 100 36
         tuf 4446794 .. 4446823 - -17.3  -3.09772   TTAAAGCCCCAAAAG       TAAAAGGGGTGGC CGAA GCCACCCCTTTCA        TGTGCGTATTTAAAG 100 47
C2U40_RS20830 4446130 .. 4446142 -  -3.4  -4.69622   AGATAATTGCAAAAA                GATG GCTTT CATC                GTTCAACCGTTCGCA  68 73
C2U40_RS20825 4444194 .. 4444204 -  -5.4  -3.53811   TGTACTGTCTCTAAA                 CTTG AAT CAAG                 GCAATCTGTGTGAAC  56 60
C2U40_RS20820 NONE
C2U40_RS20815 4443786 .. 4443804 -  -8.8  -3.70081   ATACAACCCCAAGAA             GTGTCGGT GAA ACCGACGC             AGCTTGTTGTCGTAC  69 231
C2U40_RS20810 NONE
         rrf 4440579 .. 4440589 -  -2.4  -2.76189   TAACCGACTGAACTA                 CCGC TCC GCTG                 TCTGGTTAGCTTTTT  39 120
C2U40_RS20800 4440478 .. 4440497 - -13.6  -5.72207   GTTAAACGAAAAAAA            GCCCAGTC GTTA GACTGGGC             TTCTTAAGTAGTGGC 100 37
C2U40_RS20790 4438474 .. 4438491 - -10.5  -5.12068   CACAGCCAACAAAAA             GGGCCCC CGCA GGAGCCC              TTCACGTAAACCGGG 100 45
C2U40_RS20785 NONE
        dhaL NONE
C2U40_RS20775 4435841 .. 4435855 -  -2.7  -2.60615   AGCGCCTTGAAACAG               TGGCG TCAGT CGCCG               AAGCGCTCCGCAGCC  40 16
        gldA 4434573 .. 4434592 - -16.4  -4.54727   CGCTGCAAACGAAAA            GGCCCCGC AGAT GCGGGGCC             GTTTTTATATGGCAA 100 58
C2U40_RS20755 4430324 .. 4430353 - -18.7  -3.85817   ATGTGTGTGGATAAA       TAACCCGGGGCAT GGCA ACGCCCCGGGTTA        TCAGTCGGTAGGGAA 100 44
C2U40_RS20750 4429496 .. 4429513 -    -4  -2.67747   GTTTTAGATCAGAAT             GCGGCC CACCAT GGCCGT              TGCAATTGCTGCTAA  43 244
C2U40_RS20745 4429018 .. 4429042 -  -8.4  -2.94412   CCTAATGTTAAATTA          GGGGGCGCGC AGTAG GCGCGTCCCG          CTTTAATGATTAGTT  61 46
C2U40_RS20740 4428263 .. 4428284 - -13.7  -4.05747   CATAGCTGATACAAA           GAGCCACCC ATAA GGGCGGCTC            TTTTGTGCATGGCGC 100 294
C2U40_RS20720 4425139 .. 4425160 - -15.9  -3.77489   AACCCAAGATGCAAA           CAGGCCACC CGAA GGTGGCCTG            TTTCATGGTGCGATC 100 44
C2U40_RS20705 4422394 .. 4422410 - -12.3  -5.84381   TGATGAATAAAAAAA              CAGAGCC CAA GGCTCTG              TTTTCACTGCTGTAT 100 233
C2U40_RS20695 NONE
C2U40_RS20690 4419153 .. 4419183 - -20.6  -3.61178   GCCAGTGACCCCAAA       CAAAACGAGGCGCC CAG GGCGCCTCGTTTTA       TGGCCGCACGCCTAG 100 37
C2U40_RS20675 4415900 .. 4415921 - -14.5  -3.33696   GGCCTCCTGAATGAA           GAAGAGGCC CTCA GGCCTCTTC            CTTGCTCAGCAGTGC 100 14
C2U40_RS20640 4409218 .. 4409246 -  -5.9   -3.6968   GCACAAGTCCAACAA        CTACATGGCGCTG TGC CAGCTCCATCTGG        ACGAGAGCGAGGCGA  60 392
C2U40_RS20620 NONE
C2U40_RS20615 NONE
C2U40_RS20610 4405501 .. 4405520 -   -15  -5.29782   GACAGGCATAAAAAA            GCCGGTGC AATT GCACCGGC             CAAAAGGCGTTGGAA 100 60
        recC NONE
        recB NONE
C2U40_RS20595 NONE
C2U40_RS20590 4395452 .. 4395479 -   -15  -2.73441   GATGACGCGGTAAAC        GTTGG-GCTTCGC AAC GCGAAGCACCAAC        CTACGAGATAAACTA  90 56
C2U40_RS20580 4392891 .. 4392906 -  -4.6  -3.01422   GATGTTGAGAAATGA              CAGCGG CAGA CGGCTG               CACAGCCCGCTATCC  48 133
C2U40_RS20575 4391783 .. 4391796 -  -2.3  -2.65538   AATAATCCGACATGA               CAACG AGCT CGCCG                GACCATCGACGCCGG  38 52
C2U40_RS20570 4391202 .. 4391217 - -11.8  -4.75372   ATCAGGCAGCAAAAA              GGGGCC CGCG GGCCCC               TTTTTTCATGCACGT 100 50
C2U40_RS20545 NONE
C2U40_RS20540 4385456 .. 4385485 - -13.6  -5.47159   GTGCAAGATAAAAAA       CGGGGAGG-CGGC TGGTC GCCATCCTCCCCG       CCGTGCTCCCACCGC 100 43
C2U40_RS20535 4383790 .. 4383802 -  -4.1  -3.28712   CGCCGGTGTCTACAA                CCTGT TCG ACAAG                ACAGTGGATTACACC  48 135
C2U40_RS20510 4378962 .. 4378981 - -11.4  -4.89567   CCTGAAAACATAAAA            GCCAGCCC GAAA AGGCTGGC             TTTTTGTTACTGGCT 100 67
C2U40_RS20495 4376183 .. 4376195 -  -3.4  -2.82327   GCTCGATACGGAAAC                CTGA GCGAG TCAG                TATGGCATAGAGACT  41 83
C2U40_RS20490 4373291 .. 4373311 - -16.9  -5.22006   TTACCACAATAAAAA            CAAGGGGCC CAG GGCCCCTTG            TCACATTATTGAACG 100 43
C2U40_RS20485 4371414 .. 4371424 -  -6.8  -2.98789   AGGGACAAAATAGTA                 GCCA TAC TGGC                 GGCCATCTGGGGTAT  56 104
C2U40_RS20480 4370373 .. 4370392 - -12.1  -3.04398   CTTTGCGCGTAAAAG            GGCCCGG ACTGTG CCGGGCC             AAAGAGACATGCTAG  79 78
C2U40_RS20475 NONE
C2U40_RS20470 4366715 .. 4366734 -   -15  -4.93877   CGGCAGCAAAGAAAA            CGGGAGGC TGAT GCCTCCCG             TTGTTTATCTGCCGG 100 44
        metF 4364626 .. 4364646 - -14.1  -5.55769   CGCCATAACAAAAAA            GCCAATGAG CGA CTCATTGGC            TTTTTTTGTACCCGC 100 47
C2U40_RS20445 NONE
C2U40_RS20435 4358214 .. 4358235 -  -8.7  -3.05069   TTCACCAAACAAGCA           CTGACACGC CAAG GCGCATCAG            GTCTTTGCTCTAACT  62 88
C2U40_RS20430 4357972 .. 4358000 - -14.1  -4.65747   CAAGGCCGAAGAAAA        CAGACATAAACAT GTG ATGCTTATGTCTG        CATTCTTGTTAGCAA 100 50
C2U40_RS20425 NONE
         rrf 4354671 .. 4354689 -   -16   -5.4111   AAGAACCATAAAAAA             CCCCGCTC GAT GAGCGGGG             TTTCTTGTATTGGGT 100 41
C2U40_RS20415 4353284 .. 4353312 -  -6.7  -3.41988   GCCGAGTGAACAACA        GGGTGGAAAGC AGTGCAG GCTCTCCATCC        AAAAGCGCATATCAG  59 78
C2U40_RS20410 4352737 .. 4352767 - -18.4  -5.19328   AGCTGATAACAAAAA       GCAAAACACCGGCC TAT GGCCGGTGTTTTGA       GCAGACAGTGAGCAG 100 43
C2U40_RS20400 4348129 .. 4348157 - -16.1   -3.8505   ATGAACAGTACGAAA        TAAAACGGGGCCA ATA TGGCCCCGTTTTC        GTGTCGCTGCAACTG 100 41
C2U40_RS20390 4346050 .. 4346072 - -20.6   -4.9725   ACGCCGATACAAAAA           GGCCCCTCGC ACT GCGAGGGGCC           TTTTTCATGGCTGCA 100 58
C2U40_RS20350 NONE
        kdsC NONE
        lptC NONE
        lptA NONE
C2U40_RS20330 NONE
C2U40_RS20325 4336443 .. 4336457 -  -2.1  -2.71712   TTGTTTTGCCTAAAC              CAGGCG TTTG CGC-TG               ATTGGATGGCGGGAT  39 5
C2U40_RS20320 NONE
C2U40_RS20315 NONE
C2U40_RS20310 NONE
C2U40_RS20305 4334393 .. 4334412 - -13.6  -4.90266   CTGATGAACGAAAAA            GCCAGCAG GAGT CTGCTGGC             TTGTCGGGATTTTGC 100 90
C2U40_RS20240 4322116 .. 4322143 -  -7.1  -3.15999   CTGTTACAGACCCAA        TTGCTTATGGG GGCTCT CCCACAAACAA         CAAACGATGGCCTAC  57 231
C2U40_RS20235 NONE
C2U40_RS20230 4321190 .. 4321208 - -11.7  -5.84381   TTACCAATAAAAAAA             GCCTGGC ACATG GCCAGGC             TTTTTTGACACTCGC 100 63
        petA 4320357 .. 4320375 -    -3  -3.35046   TCAGTTTGGCAAACA             TGGTCAGG CCT CCTTGCCA             TCGGCACCGACCAGG  47 10
C2U40_RS20220 NONE
C2U40_RS20215 4318351 .. 4318381 - -14.9  -4.27774   ATTAAAAAGCAGAAA      CGGCAATGAAG-CC TCTT GGTCTTCATTGCCG       TGCATTATATTACCC 100 53
C2U40_RS20210 NONE
C2U40_RS20205 4317248 .. 4317265 - -12.7  -5.54192   ATGAACCTAAAAAAA             CGCAGCC AGCT GGCTGCG              TTTTTTATTTGATGA 100 30
        rsmI 4311558 .. 4311586 -  -6.5  -2.70022   CGCACTCGAGAGAAC        GCCAAGGCTGGCC TCC GGCCTGCATCTGC        CCGCTTCAGTAATGT  51 31
        rnpB 4311039 .. 4311062 - -18.2  -5.19328   ACTCCATAATAAAAA          TCCCGGCACC AGAA GGTGCCGGGA           TTGGTTGGTATTTGC 100 53
C2U40_RS20165 NONE
        fliN 4309593 .. 4309603 -  -5.4  -2.88959   GCAGAGCAAACAGCA                 GATG GCG CATC                 AGTCGTCCATGCCAC  49 24
        fliP NONE
C2U40_RS20150 NONE
        fliR NONE
        flhB NONE
        flhA 4304430 .. 4304441 -  -3.6  -3.31144   TCCGTATTGGGACAA                GGCG GCAC CACC                 TATTCGGTGGGAGCT  49 190
C2U40_RS20130 NONE
        fliE NONE
C2U40_RS20120 NONE
        fliG NONE
C2U40_RS20110 NONE
        fliI NONE
C2U40_RS20100 4297055 .. 4297090 -  -7.6  -4.67353   GCACTCATCGAAAAA    CTGCCCGCCAACC-TGC AAC ACAAGGTTGCCAAGCAG    TGGCTGCAGCTGGAA  83 173
        flgB 4295204 .. 4295218 -  -3.4  -2.92078   TGAACGACATAATCA               GCGGCC CTC GATCGC               CTTGGCGATCCCGGT  42 8
C2U40_RS20075 NONE
C2U40_RS20070 NONE
        flgE NONE
        flgF NONE
        flgG NONE
C2U40_RS20050 NONE
C2U40_RS20045 NONE
C2U40_RS20040 NONE
C2U40_RS20035 NONE
        flgL NONE
C2U40_RS20020 4284149 .. 4284179 -  -7.4  -4.62069   TGCTCAGCGGAAAAA       CATCGGGGCTGACA AAG TGCCAGCCCAGTAG       GAATAATCGCAGTGA  84 44
C2U40_RS20015 4283139 .. 4283159 - -16.1  -4.03234   CCCTTGTCAGACAAA            GGCCGCCCC ACA GGAGCGGCC            ATGCGATTCATTAAC 100 36
C2U40_RS20010 4281748 .. 4281764 -  -4.3  -2.92449   GAAAGATGCCACAGA              CAGCAGG AAG CGTGCCG              GTTTAGAGAGCACCC  47 28
        fliS 4281303 .. 4281317 -  -6.4  -3.90922   AGGCCGGGGAAAGAA               GGAAGC ATC ACTTCC               GCATCAGCGAGGATG  65 29
C2U40_RS20000 NONE
C2U40_RS19995 NONE
C2U40_RS19990 NONE
C2U40_RS19985 4278539 .. 4278560 -  -5.1  -2.80511   CGCAGAATTCAAGGA           TCCTCACCA GGGA TGGTGAAGC            GTTAATAAATGGAGT  48 27
        motA NONE
C2U40_RS19975 NONE
C2U40_RS19970 4276138 .. 4276148 -  -6.8   -3.1247   ATCGTCTACAGCCAA                 GGAG GCT CTCC                 TGCCCCGACGCACCA  56 142
C2U40_RS19960 4274682 .. 4274696 -  -2.8  -4.21974   GCACCACGCAACAAA               TTGCAG TCC CTGAAA               ATGAGTTAAAGGGGG  60 250
C2U40_RS19955 NONE
C2U40_RS19950 NONE
        ftsL NONE
C2U40_RS19940 NONE
C2U40_RS19935 NONE
C2U40_RS19930 NONE
C2U40_RS19925 NONE
C2U40_RS19920 4265973 .. 4266008 -  -7.4  -2.98823   TGCCGGTCATAGAGA    CCTGCAGGGCGCGCCG GCAA CAGCCAGCGCTGCAAG     AAGCCTGCGACTGCG  59 51
C2U40_RS19915 NONE
        murG NONE
C2U40_RS19905 4262187 .. 4262200 -  -3.7  -3.14344   CACCCCGGCGATGAA               GCCCC CCTT GGTGC                GCCCTTGTGCCCTTG  47 145
C2U40_RS19900 NONE
C2U40_RS19895 4260237 .. 4260247 -  -3.2  -2.59323   AAAATCTTTTAGAAC                 TCGC CAC GCAA                 CCAGTTGCTGACCCG  40 8
C2U40_RS19890 4259024 .. 4259037 -  -2.3  -3.25779   GCAACAAACAAACCA               GCGTC ATTG GAGGC                TTAGTCAGCTTGCTT  43 26
        lpxC 4257964 .. 4258004 - -14.1   -4.5123   AATGGAGTAAACAAA  TAACGGAACGTCGGTGC GGAGAGA GGACCGACGTTCCGTTG  CACAGCTATCAGGCC 100 34
C2U40_RS19880 NONE
C2U40_RS19875 4254148 .. 4254169 - -15.9  -3.51232   CCTGCCGGAAATGAA           TGCACCGCC CGGA GGCGGTGCA            TCATCGTCATTGCGC 100 43
C2U40_RS19870 NONE
C2U40_RS19865 4252455 .. 4252481 - -19.6  -3.81929   CAATAAGCCAGCAAA         CAAAAAGGGCCG ATA CGGCCCTTTTTG         TTTTGGTATGCACTG 100 50
C2U40_RS19825 4246195 .. 4246209 - -12.8  -4.12902   GAAGGACTTGCAAAA               GGCGCC ACG GGCGCC               TTTTCTTTAAGGCAG  95 108
C2U40_RS19810 4244020 .. 4244042 - -11.3  -4.76644   AACAGCCAGTAAAAA           TGGCCTGCC ATAAA GGCAAGCCA           TTGTTTTAAAAACAC 100 60
C2U40_RS19805 NONE
        aceE NONE
        aceF 4238241 .. 4238261 - -11.8  -4.95876   AATGAGAAGTAAAAA            GGGCAGGC TCTGG GCCCGCCC            TCTCACTTACAGGAC 100 32
        lpdA 4236639 .. 4236668 - -13.7  -4.61231   GCAGACGCTGAAAAA       CAAAAAGCCGCTC GATT GAGCGGCTTTTTT        CATGCTGACAGCGAG 100 48
C2U40_RS19770 NONE
        acnB 4227219 .. 4227238 - -12.8  -5.44638   AGAACAAAAACAAAA            GCCCCGGC ACGG ACCGGGGC             TTTGCATCAGCACGG 100 64
C2U40_RS19760 4225242 .. 4225298 - -11.3  -3.19602   GCCTGCACACCAAGA CCCGGCCGGGAGCCTGGCAGGAGTGGT TGC AGCACGCCGGCCAGTCCGCCAGCGAGG AGGCGCCGGGGCAGA  67 266
C2U40_RS19750 4223885 .. 4223901 -  -2.1   -4.4831   AGGCATGAAAAACAA              GCCCCTA CAG TCGGGGG              TGGATAGGGGAGAGC  63 56
C2U40_RS19745 4222381 .. 4222393 -  -3.3  -3.21416   CAGGGTGATGAGTAA                GCGAG TAT CTTGC                ATATCGGTCATGTCA  45 46
C2U40_RS19740 4221184 .. 4221203 - -11.4  -5.71712   CTTCAGACAAAAAAA            GACCCGCA CAAG CGCGGGTC             ATCTCATTACATCAG 100 37
C2U40_RS19735 4219691 .. 4219739 - -23.1  -3.53012   CCTTCCTGCTGGAAA CCGCCCACCTGGCCGGGCTGCTG ACC CAGCTGCCCTGCCAGGTGAGCTA CCTGCCAGCCCCCTG 100 51
C2U40_RS19715 NONE
C2U40_RS19710 NONE
C2U40_RS19705 4217182 .. 4217200 -  -4.4  -2.72511   GCTATCTGGGCAAAT             GGTGCCGG CTA CCGGAATC             GAACTGGTGACCTAC  46 6
C2U40_RS19700 4217075 .. 4217086 -    -3  -2.62616   GTACTTTGGAGACCA                GATA TCGC TATC                 TCATCGCCTTTATTG  40 41
C2U40_RS19695 4216953 .. 4216972 - -13.6  -5.27938   ACGGGCAAAGAAAAA            GCCCAGCA TTGC TGCTGGGC             TTTTGAATTGGCTCC 100 34
C2U40_RS19690 4214938 .. 4214970 -  -3.9  -3.32844   CCCGCCACCCGACAA      GCGGCGGGCGAGA TTGCCGT CCACGGCCGGCGC      GGGTAAGCTCGCCCC  49 433
C2U40_RS19680 4214336 .. 4214364 -  -2.1  -3.96216   CTGTCAGCGAAACAA        GGGGGGAGACCTG CAC CTTGCCACCCCCT        CGCCTGTGCTGGCCG  54 51
C2U40_RS19675 4212835 .. 4212862 -   -20  -3.06831   CGAACGGCCACTCAA        GCAAAAGGGCGC CGAG GCGCCCTTTTGC         TGCTTGATGGCTCAA 100 37
C2U40_RS19665 4210837 .. 4210872 -  -3.1  -3.72576   CCGGCGGTCATCAAA    GCGCTGC-GCAGCCTG CTGGC CCGGCTGCTGCCACCC    GCTACCACTCGATAG  53 27
C2U40_RS19650 4208098 .. 4208120 -  -5.5  -2.69661   AAGTGACAACAAGAG          GTCCGGCGAG CCAG CTCGCCTG-C           GGGAAGGGATTGAAA  48 74
         bfr 4207494 .. 4207523 - -16.7  -2.91912   CTATGCAGCCAGACA       TTAAAAAACCCGC CGCA GCGGGTTTTTTAA        TCGTTTTTTCATGCC 100 49
C2U40_RS19640 NONE
C2U40_RS19635 4204654 .. 4204675 - -17.3  -5.06414   TCCCGCCAATAAAAA           GAGCCGGCC CCTT GGCCGGCTC            TGTCGTTTCTGCCCC 100 42
C2U40_RS19625 4202622 .. 4202642 - -14.7  -4.05004   TGATGACAACAACAA            GGGCGGGAC AAG ATCCCGCCC            TTTTGCATCTGGTAT 100 51
        treR 4198903 .. 4198917 -  -5.7  -4.85599   CCGAGCTCACAAAAA               GCACA TTTTT TGTGC               AGGACTAGGTGATGG  78 44
C2U40_RS19600 4197278 .. 4197303 - -14.7  -2.88788   CGAATGAAAAAGGGA         GAGGGCGACCC CTGC GGGTCGCCCTG          ATGCGTGGGATCAGG  90 36
        treC NONE
C2U40_RS19590 4194916 .. 4194937 -  -8.7  -2.83634   AAATCAGACGAAGGA           TGGCGCC TTGAACGC GGCGCCA            GATCTCAACCGGGGC  60 63
C2U40_RS19580 4193431 .. 4193451 - -13.9  -2.62184   GGGCCCGGCAGATCA            CGCCGGCTC GGT GCGCCGGCG            CCCGCCTTGCCAGGT  84 2
C2U40_RS19575 4192698 .. 4192725 - -15.6  -2.70932   GGCGTTTGTCAACGA        CGACAGGGAGGC CTTG GCCTCCCTGTCT         TGTCTCACATTGGTG  95 60
C2U40_RS19480 4174649 .. 4174672 - -16.8  -4.21462   ATTCATTATGCAAAA          GGCCCATCAC GAAA GTGATGGGCC           TTTTGTTTTTAGCCC 100 364
C2U40_RS19430 NONE
C2U40_RS19425 NONE
C2U40_RS19420 NONE
C2U40_RS19415 4165325 .. 4165354 -  -7.3  -3.40403   TGTCCCGTATGAGAA       TGGACTCCACTC TTCCTCC GAGTGGA-TCCA       TCCGTTTTCTCTCTC  59 47
C2U40_RS19405 NONE
C2U40_RS19400 NONE
C2U40_RS19395 4161157 .. 4161176 -   -15   -5.5112   GCCACGAATAAAAAA            CGGGAGGC CAAG GCCTCCCG             TTCCATTTTGGGTCT 100 57
C2U40_RS19385 4159044 .. 4159063 -   -15   -4.7497   CCCACTGATGAAAAA            GGGCCGAC GACA GTCGGCCC             TTTTTGTTGTGCAGC 100 58
C2U40_RS19375 4157351 .. 4157372 - -17.3  -4.45399   AGACCAACAGCAAAA           GGGCGCCTC CATG GAGGCGCCC            TTGTTACGTCTGGCG 100 55
C2U40_RS19345 4150722 .. 4150742 - -18.3   -4.8622   CTCCGCAATGAAAAA            GCCCGGGTC AGT GACCCGGGC            TTTTTTGTCCATGCT 100 57
C2U40_RS19320 4146606 .. 4146616 -  -8.2  -3.05816   TGACCGCCCACTGAA                 GGCG GCC CGCC                 CGCTCAGCCTTGGGG  62 29
C2U40_RS19310 4144586 .. 4144597 -  -7.2  -3.64703   CTCCTTGTACTCAAA                CCCG GATC CGGG                 TGGTGATGTCGGTGG  63 9
C2U40_RS19305 NONE
C2U40_RS19300 4143383 .. 4143410 - -11.2  -4.67556   ACAAGACGGCAAAAA        CAACAGGGCGGC CATG GCCGCCCTGGTT         TATTCAAGCGCCGCG 100 29
C2U40_RS19295 4141873 .. 4141906 - -12.5  -4.19177   ATCGGGGAATAGAAA    CGTGAGCGGGCCTGC CACTGC GCAGGCCCGC-C-CG     GCCAGCCTCGTTTAC  95 37
C2U40_RS19275 4138107 .. 4138135 - -13.3  -3.71873   CTATCGACAGCGAAA        GAAAAAGGTGAGC CAT GCTCACCTTTTTG        CATTGCAAGCGCTGC 100 52
C2U40_RS19260 4134697 .. 4134714 - -12.7  -4.86621   ATCGGCAATGAAAAA             GGCGACC ATCA GGTCGCC              TTTTTGTTATCCGGG 100 88
C2U40_RS19250 4132391 .. 4132411 -  -7.5  -3.14132   TGGCCTGGGTATGAA            CGAGCGCCA CCT TAGCGCTCC            GCCAGCCAGCGGGTA  61 16
C2U40_RS19245 NONE
C2U40_RS19240 NONE
C2U40_RS19235 NONE
C2U40_RS19230 4129895 .. 4129906 -  -5.8   -4.0075   AGCCAATCAATCAAA                CAGG GTAT CCTG                 CCGCCCCTGCAGCAA  68 5
C2U40_RS19225 4129373 .. 4129388 - -11.8  -3.36175   AATGCGGACTCACAA              CCCGCC ATGC GGCGGG               TCTGGCAAGACTATC  80 84
C2U40_RS19220 NONE
C2U40_RS19215 NONE
C2U40_RS19210 4126124 .. 4126137 -  -2.3  -2.80935   ATTGTATTGAGTAGA               CATGG AGGG CCTTG                CGAATTGACGTTTGG  39 129
        parE 4124182 .. 4124214 -  -5.3  -3.30124   CGGGAGCCGCCACAA      GGCGGCTCCGGCTAA ATG CTTGCCGGCCCCGAC      AGAGCCGGCCGACGG  54 42
        parC 4121830 .. 4121845 - -11.8  -4.35581   TTAAAATAGGTAAAA              GGGCGC TTTC GCGCCC               TTCTTGTTAATTACC  95 36
C2U40_RS19145 4111488 .. 4111504 - -13.7   -5.5112   TTCACCAATAAAAAA              GGGAGCC GGC GGCTCCC              TCATGCAATCAGCGG 100 46
        pspA NONE
C2U40_RS19135 NONE
C2U40_RS19130 4110140 .. 4110159 -  -9.2  -5.38047   CACCCAGACAAAAAA            GGCAGCTG CACG CAGCGGCC             AAGGAAGGAGCCGGT 100 52
C2U40_RS19120 4108750 .. 4108774 -  -3.4  -3.28712   GCTGCCGCTGCACAA          GCTCGGGCGC CATCT GCGCCGCAAC          GCCGACGCTCAGGGT  46 34
C2U40_RS19110 4106829 .. 4106839 -  -8.2  -3.14881   CAATCTGCTGATCAA                 GCGG ATC CCGC                 TCCAGCAGCCCATCG  58 395
C2U40_RS19100 4105248 .. 4105274 -  -9.5  -3.18467   AAAGCCTGAACCTAA         GTGGCCTGA GCCTTGCTG TCAGGCCAC         TCCATATCTCGACCC  67 83
C2U40_RS19085 4102586 .. 4102598 -  -3.4  -3.50572   AGCCATTTCATACAA                GACA CTCCC TGTC                AGATGCTGGAGGTCA  49 94
C2U40_RS19080 4101833 .. 4101871 - -16.1  -4.68384   AGGCACGCAATAAAA  CCG-GCCCGG-TGCTGAGC ATC GATCAGCATCCGGGCGCGG  CCAAATATTTCGAGG 100 61
C2U40_RS19065 4098035 .. 4098057 - -20.6  -5.11063   ACCAGCCAACAAAAA           GGCCCCGCCA GAG TGGCGGGGCC           TTTTTGTGTCGGCGA 100 49
C2U40_RS19055 4096240 .. 4096253 -  -2.3  -2.87132   GTGTGTTTGGAGACA               GCCAG TTTA CCAGC                ACCCTGTCTGTCAAC  41 98
C2U40_RS19050 4094971 .. 4094986 - -10.4  -5.60993   GCGGGCATAAAAAAA              GCTCCC GAAC GGGAGC               TTTTTTTAGGTTCAT 100 37
C2U40_RS19040 NONE
C2U40_RS19035 4092122 .. 4092141 - -13.6  -4.75372   ATCAGCCATGAAAAA            GGGGAACC GCGA GGTTCCCC             TTTTGTTTGGCTGCT 100 71
C2U40_RS19025 4087879 .. 4087898 -  -2.9  -5.95449   AAACAAAACAAAAAA            GCAAGTA TCTTTT TACTTAC             CAATAAAAACCAAGG 100 173
C2U40_RS19015 4086380 .. 4086392 -  -4.1  -4.35327   TCATTAAAAACTAAA                TGGAC AGA ATCCA                GATATAAACAGCACC  65 177
C2U40_RS19010 4085274 .. 4085286 -  -6.3  -3.96624   GATTGTCATGACAAA                CCTTT CCT AAAGG                CCACGCCGATTGGGG  65 266
C2U40_RS19005 4083965 .. 4083985 - -14.7   -4.0802   AGTTGAACAATCAAA            CCCCAGCCA GAA CGGCTGGGG            TTTTGTTTGCCAGTT 100 201
C2U40_RS19000 NONE
C2U40_RS18995 NONE
C2U40_RS18990 4078977 .. 4079011 -   -12  -3.09491   CACATAGTCATTCAA     CACGCCGTAAGGCGCC AGC GGCACCGGATGGCGTG     CGCGCTTGGCAATCA  75 456
C2U40_RS18980 NONE
C2U40_RS18975 NONE
C2U40_RS18970 4073450 .. 4073460 -  -2.4  -2.78816   CGATGCCCGATGATA                 TCCC AAG GGGT                 CTCATTCAGGTTGCG  39 113
C2U40_RS18965 NONE
C2U40_RS18960 4072078 .. 4072094 -  -2.4  -3.19339   TATTAAGTAAAACTA              TTAATT GGCGA AATTAA              ATTGTTAGTCTGCAC  43 22
C2U40_RS18955 NONE
C2U40_RS18950 NONE
C2U40_RS18945 NONE
C2U40_RS18940 NONE
C2U40_RS18935 4066739 .. 4066789 - -14.2  -4.07568   TGTCCTCCGGCAAAA TATCCATATCTTGCATCGGGAGTA GAT TACTCCCGATGCAAGATAAACACG GCTTCACCTATACAC 100 109
C2U40_RS18930 4065135 .. 4065151 - -13.7  -3.51924   TGGCGATTTATATAA              GGAGCGG CAT CCGCTCC              TTATATTTCTCCATC  95 67
C2U40_RS18890 4057677 .. 4057693 -  -2.2  -3.26545   TTCATACAGTATCAA              GCCCAA TTTAT CTGAGC              AGGGCCAACAGACCC  43 16
        recA 4056508 .. 4056527 -   -15  -4.18213   AACCATAAATAACAA            GGCCGGGT ATCA ACCCGGCC             TTCCTTTGTTCCTTA 100 38
C2U40_RS18880 4055812 .. 4055829 -  -9.9  -3.54129   GACACCCGCGGCAAA             GGACATG CAAT CATGTCC              ATGGTGGCGACGGGA  74 194
C2U40_RS18875 NONE
C2U40_RS18870 4051660 .. 4051674 -  -2.8  -4.06055   ATGGTTGAAACTAAA               TCAATC AGG GATTGT               TTCCCAAGGGCTGCT  58 15
        csrA 4051339 .. 4051359 - -12.6  -5.35224   CCCAGAAAAACAAAA            GGCGACAC ATGAG GTGTCGCC            TTGTCACAGCCATTA 100 48
C2U40_RS18860 NONE
C2U40_RS18855 4050919 .. 4050936 -  -8.5  -5.68039   AAAGCGATAAAAAAA             GCTTACT CAAC AGTAAGC              CTTTTTCAGGTGTAC 100 84
C2U40_RS18850 NONE
C2U40_RS18845 NONE
C2U40_RS18840 NONE
C2U40_RS18835 4050473 .. 4050496 - -14.6  -5.71712   GGCCATATAAAAAAA          CAGCCCCGAC CGAG GTCGAGGCTG           TCTTCTGTATGGTGC 100 35
        lptF 4040622 .. 4040638 -  -4.3   -3.2032   GGGCGACATCAAAAT              GACCCGG TCG CCATGTC              TATCGAGAATGCCAA  49 70
C2U40_RS18795 4039433 .. 4039451 -   -16  -5.52023   AGCAGCAACAAAAAA             GGGCACCC CGA GGGTGCCC             TTTTTGCTGGCCGAC 100 45
C2U40_RS18785 4038622 .. 4038641 - -13.6  -5.38839   CACAGAAAAACAAAA            GGCCATCC GTTG GGATGGCC             TTAAGTCATTGAATT 100 45
C2U40_RS18670 NONE
C2U40_RS18665 NONE
C2U40_RS18660 NONE
C2U40_RS18655 4016100 .. 4016119 -  -9.2  -4.72029   TCCAAGGCAATAAAA            TGGGGTGC TATT GCACCCCC             AGTCCTTTCAGTACC  91 13
C2U40_RS18565 NONE
C2U40_RS18560 NONE
C2U40_RS18555 4004487 .. 4004516 - -18.1  -4.72486   GAGAAAGCGGAAAAA       CAAAAGGCCATCA TTGC TGATGGCCTTTTG        TCTTGGAATTTGATG 100 165
C2U40_RS18550 4002594 .. 4002614 - -19.7  -5.36441   GCCCCACATAAAAAA            GCCGCCGGC ATG GCCGGCGGC            AATATAGCTGACTAA 100 52
C2U40_RS18545 4000829 .. 4000846 - -11.3  -5.65177   ACAGGTATAAAAAAA             CGACTCC ATTT GGAGTCG              TTTTTATCAGAGCCA 100 132
C2U40_RS18540 4000541 .. 4000557 -  -4.3  -3.40403   CTCCTTCGACTACAA              CAGCATC ACT GGTGCCG              TGACCCGCAATTTCC  51 14
C2U40_RS18530 3999045 .. 3999055 -  -5.4  -3.34962   GGTCACATTTTATAA                 GCAT GAA ATGC                 GCTAGGGGTCGTCAA  54 101
C2U40_RS18525 3997586 .. 3997618 - -17.8  -2.72511   GTCACCGCCCCAAAC      GCGAACGCCACAGC TTCTC GCTGTGGCGTTCGT      CTTTATCCTGACAGT 100 50
C2U40_RS18520 3997235 .. 3997253 - -13.2  -3.09516   TCGGGCATTAGTCAA             TGCCAGCA CCC TGCTGGCA             ATGCCTATTTCAGCC  83 121
C2U40_RS18515 3996152 .. 3996170 -   -16  -3.34398   GGTGGGGGCGAAACA             GGGCGGAC CAG GTCCGCCC             TCTCATCAACCTATT 100 39
        deoA NONE
C2U40_RS18505 NONE
        deoD 3992680 .. 3992699 - -16.4  -4.35524   CCTTGAAATGCAAAA            CGGCGGCC CGAA GGCCGCCG             TTGTCATTATTCATG 100 52
        serB 3988595 .. 3988611 -  -3.6  -3.15544   CGTGACGTGGACCAA              GGGCCT TGCCG AGGCGC              CGGGACTAGCGGCGA  47 31
C2U40_RS18480 3987576 .. 3987602 - -23.8  -4.67982   GGGCAGGCAATAAAA         CCATGGCGGGCC TCT GGCCCGCCATGG         TTTGTTCATCCATCA 100 80
C2U40_RS18470 3983633 .. 3983650 - -12.7  -4.75174   CATTCAATGTAAAAA             GGAGCGC CGTT GCGCTCC              TTTTTATTGCCTGCC 100 58
C2U40_RS18455 3982007 .. 3982022 - -11.8  -5.46657   GATGGCAATAAAAAA              CCCGGC TGGC GCCGGG               TTTTTGGGAATTACT 100 36
C2U40_RS18450 3981459 .. 3981481 - -17.8  -5.96219   GACCTATAAAAAAAA           CCGGCAACAC CCA GTGTTGCCGG           TTTTTTATTGTCTCT 100 50
C2U40_RS18435 NONE
C2U40_RS18430 NONE
C2U40_RS18425 3978957 .. 3978984 -   -20  -2.77899   CCGGGCGACCAACGA        CAAGAGGCCAGC ATCA GCTGGCCTCTTG         CATTGCATCTGTCAC 100 49
C2U40_RS18405 3973667 .. 3973692 - -17.7  -2.71268   GGGCAGCAGATAGCA         CAACGGCCATC CGGA GATGGCCGTTG          TAACGGGCAAGCTTA 100 38
C2U40_RS18385 3969777 .. 3969809 -  -3.4   -5.0538   TGTTACCTGAAAAAA     GCACTGCCC--GATGC ATC GCATCCCGGGCCTTGC     TCATGAATAGTCGCG  77 26
C2U40_RS18380 NONE
C2U40_RS18375 NONE
C2U40_RS18370 NONE
C2U40_RS18365 3967555 .. 3967576 - -15.9  -5.14563   GCCGTCATGAAAAAA           GCCCCGAAC CTGC GTTCGGGGC            TTTTTCTGGGCATGA 100 47
C2U40_RS18350 3964594 .. 3964615 - -18.7  -3.23395   AGCCATCATGACGAA           GCGGGGGGC ATTG GCCCCCCGC            AGTTGTTTTGGCAGC 100 51
C2U40_RS18340 3963062 .. 3963077 -  -5.4  -4.08692   GAAGGCGCTGCAAAA              GAGCAA GGCG CTGCTC               AAGCAGGAGCTCAGG  63 152
C2U40_RS18330 3961901 .. 3961914 -  -3.1  -3.63817   CACAGTGTAAAAAAC               TGAAC AAGC GTCCA                TTAATGTCAGTGCTG  51 32
C2U40_RS18325 NONE
C2U40_RS18320 3960394 .. 3960411 - -14.1  -5.31877   AGCCACCATAAAAAA             GCGCGCC ATTA GGCGCGC              TTTTTGTTTTCTGCC 100 68
C2U40_RS18305 NONE
C2U40_RS18300 3954581 .. 3954610 - -15.2  -3.28712   TTTTTGCCTGGATAA       CAAAAAACCGCC TCTGGC GGCGGTTTTTTG        TTCAATCAGCTATTT 100 41
C2U40_RS18295 NONE
        cydB NONE
C2U40_RS18285 NONE
C2U40_RS18280 3950518 .. 3950552 - -15.7  -4.08853   CTGAATAGGAAAGAA     GCAGGGGGAAGCAGG GAAAT CCTGCCTCCCCCCGT     TTTTTATGAAAGGAA 100 29
        ybgC NONE
        tolQ NONE
        tolR NONE
C2U40_RS18260 NONE
        tolB NONE
         pal 3945703 .. 3945720 - -11.3  -4.88918   TTAGTGCAAATAAAA             CGGCCAT CGAA ATGGCCG              CTTGCATATAAACGA 100 60
        ygbF 3944757 .. 3944771 -  -4.3  -3.24924   GCTGTATTTACAAGA               CTGTT ACGAA AACAG               TGACATGCAGCAATG  49 41
C2U40_RS18240 NONE
C2U40_RS18235 3944402 .. 3944421 -  -8.6  -2.87344   GACTTGCCTGACACA            CTGCTTGC CTTG GCAAACAG             TTTAAAACTGGTGGT  61 34
C2U40_RS18230 NONE
C2U40_RS18225 NONE
C2U40_RS18220 NONE
C2U40_RS18215 NONE
C2U40_RS18210 NONE
C2U40_RS18205 NONE
C2U40_RS18200 NONE
C2U40_RS18195 NONE
C2U40_RS18190 NONE
C2U40_RS18185 NONE
C2U40_RS18180 NONE
C2U40_RS18175 3943225 .. 3943242 - -12.7  -5.61596   ACGGCCATAAAAAAA             GCCCGCA TTGC TGCGGGC              TTTTTCAATCTGGTG 100 36
C2U40_RS18165 3939839 .. 3939860 - -15.9  -4.62441   GTTCAGATAAATAAA           GAGGGCTCC CACG GGAGCCCTC            TTTGCATCTCTTCAT 100 49
C2U40_RS18150 NONE
C2U40_RS18145 NONE
        glgX NONE
        msrB 3930398 .. 3930423 - -17.5  -4.55295   GCGGCCACAAAGAAA         CGGCCCCCTGC CAAG GCTGGGGGCCG          TTTTTGCATGCATGC 100 53
C2U40_RS18110 NONE
C2U40_RS18105 3926006 .. 3926021 - -11.8  -5.42259   GGATCGCGAAAAAAA              CCGGCC AGTC GGCCGG               TTGTGTCATTTTATG 100 55
C2U40_RS18100 3925528 .. 3925568 - -28.7  -2.62184   CGGCGGGCCAGACCA  GATAAAAGAAGAGGAGGCC ACT GGCCTCCTCTTCTTTTATC  TGCAGTCAGCGACCT 100 45
C2U40_RS18085 3922481 .. 3922492 -  -2.2  -4.09739   GCAATGGCCTGAAAA                CGAC TCAT GTCA                 CCGCCAACATGTCGA  56 230
C2U40_RS18080 3921552 .. 3921568 - -10.8   -5.5112   CTGACCAACAAAAAA              GGGGCC GACAT GGCCCC              TTCCTGTTGCTGTTT 100 48
C2U40_RS18070 3919879 .. 3919898 - -13.6  -5.47159   GCCAACAAATAAAAA            CCGGAGCA ATTT TGCTCCGG             TTTTACAGGGTGGTG 100 56
C2U40_RS18065 3918352 .. 3918362 -  -6.8  -3.35679   GGCGGCCATCGACAA                 GGTC AGG GACC                 GTCACCAACAGGCGC  55 64
C2U40_RS18055 3915894 .. 3915911 - -14.1  -2.71144   CACGCCCCCCAACTA             GGCCCGG TCAG CCGGGCC              GCGGTTACAGCAGCC  85 30
C2U40_RS18025 3907945 .. 3907958 -  -9.5   -5.4505   CCCGTGAATAAAAAA               GGCCC CGCA GGGCC                AACAAGACAGCCGGT 100 64
C2U40_RS18020 3906978 .. 3906990 -  -5.5  -3.27774   CAGCCTAAGCAGCAA                CCCTG CGG CAAGG                TCAAGCCCTGCCGAG  54 221
C2U40_RS18015 3905258 .. 3905274 -  -9.4  -4.40298   AGTGAAATGAACAAA              TGGCCC CGTTC GGGCCA              TTCTTTTTTACTCTT  86 33
C2U40_RS18010 3903962 .. 3903979 - -12.7   -4.7173   GACCAGACGCAAAAA             CGGGAGC ATCT GCTCCCG              TTTTTTTCGCATCAC 100 61
C2U40_RS18005 3903190 .. 3903203 -  -8.1  -2.79671   ATGTTAAGTGCAAAT               CCGGA TCAT TCCGG                GCACTCGTCTCAGCC  57 56
C2U40_RS18000 3901813 .. 3901844 - -20.2  -3.86015   CACGGTCGCCACAAA      CGACAACGCCCGGC AGGG GCCGGGCGTTGTCT       GGGAGCGAGGGGGCG 100 41
C2U40_RS17995 NONE
C2U40_RS17990 3899332 .. 3899352 - -18.3  -5.75342   CGGCCGCAAAAAAAA            GCCCCGACC AGA GGTCGGGGC            CATGTCGGCAAGCAC 100 44
        putP 3897524 .. 3897540 - -15.1  -5.25803   AAGTGCCATAAAAAA              GCCCCGC GAT GCGGGGC              TTTTTGTTATCGACA 100 50
C2U40_RS17950 3891972 .. 3891986 - -12.8  -5.63517   CGCGCAAATAAAAAA               GCCCCG TCA CGGGGC               TTTTTCCATGCAGGC 100 46
C2U40_RS17940 3890248 .. 3890267 -   -15  -3.24747   CTCGCACACCACCAA            GGGCCTGC CACT GCAGGCCC             TTTTTATTGGTCATG  95 29
C2U40_RS17920 3886381 .. 3886396 - -10.4  -4.05714   ACCGCCAACGACAAA              GGGCTC CTCA GAGCCC               TTTTCGCTGTCTTGC  83 58
        cobA NONE
C2U40_RS17900 NONE
C2U40_RS17895 NONE
C2U40_RS17890 3879058 .. 3879081 -  -3.9  -2.76261   CCTCAATGCTGAAAC         GGTCTG-GCTC CCTG GAGCTCAG-CC          TCTGGCCACTCGCCA  43 108
        cysC 3878374 .. 3878389 - -11.8  -5.37043   ATTCCATATAAAAAA              GGGGGC AAAC GCCCCC               TTTTTTATCAATATT 100 59
         mpl NONE
C2U40_RS17795 3862666 .. 3862695 - -19.3  -4.64861   CTCCGTCAAAATAAA       GCGGCGCCGAACT GTTC AGGTCGGCGCCGC        TTTTGTTTGTCCGCT 100 51
         hpt 3861231 .. 3861246 - -11.8  -4.60797   TCTCGAGACAGAAAA              GGCGGC CAAG GCCGCC               TGCAGACAGAAAATG 100 80
C2U40_RS17780 NONE
C2U40_RS17775 3859472 .. 3859491 -   -15   -5.8187   GAGGCAACAAAAAAA            CGGGCACC CCAG GGTGCCCG             TTGCATTCTATCAGT 100 36
C2U40_RS17770 NONE
C2U40_RS17765 NONE
C2U40_RS17760 NONE
C2U40_RS17755 NONE
C2U40_RS17750 3856008 .. 3856031 - -16.8  -3.35679   CTGCGCCACTGACAA          CAAAGCCCGC ATGT GCGGGCTTTG           TTGTTTCTGAGCGTT 100 47
        hrpB 3846394 .. 3846437 -  -5.8  -3.48269   GGGAGCAAACACCAA CCTCGATCAGTTCCCTCTCCC TCT GGGAGAGGGC-CAGGGTGAGG GTCATCTGCTGGAGT  58 67
        mrcB 3843867 .. 3843877 -  -2.4  -2.63596   GGGGATGTGACATGA                 GCAC TCC GGGC                 AAGCGGGCAGCCAGG  38 55
C2U40_RS17695 3843396 .. 3843423 - -22.8  -3.70149   TGCACACCATGCAAA        GAAGCCGCCCGG CTAA CCGGGCGGCTTC         TGCTTTTTATGGGCG 100 65
C2U40_RS17680 NONE
C2U40_RS17675 3839818 .. 3839846 - -21.9  -3.57792   GCAGGCAGCCGGAAA        CAACAAAGGGGCC AGT GGCCCCTTTGTTG        TTTCCGTCCGGTGTC 100 39
C2U40_RS17665 NONE
C2U40_RS17660 3837021 .. 3837044 - -13.2   -4.7078   GGAAGTAGCCAAAAA          GAAGGCCGGT ATGC ACCGACCTTC           TTTTTTTATTGCTGA 100 31
C2U40_RS17655 NONE
C2U40_RS17640 NONE
C2U40_RS17635 3831041 .. 3831054 -  -3.1  -3.62591   CTCACAACCGTTAAA               TCCAC AAAC ATGGA                AACCGCGAAATTATC  51 80
C2U40_RS17630 3830627 .. 3830642 - -11.8  -4.55798   GAGGGCAAACGAAAA              GGGCCC CTTG GGGCCC               TTCGATATCACGCGG 100 51
C2U40_RS17625 3828550 .. 3828571 -  -8.7  -3.05069   TTCACCAAACAAGCA           CTGACACGC CAAG GCGCATCAG            GTCTTTGCTCTAACT  62 88
C2U40_RS17620 3828308 .. 3828336 - -14.1  -4.65747   CAAGGCCGAAGAAAA        CAGACATAAACAT GTG ATGCTTATGTCTG        CATTCTTGTTAGCAA 100 50
C2U40_RS17615 NONE
         rrf 3825002 .. 3825021 -   -15   -5.4833   TCAGCCAATAAAAAA            GCCCGCTC AAAT GAGCGGGC             TTTCAATGTTGGGTG 100 40
C2U40_RS17605 3824222 .. 3824253 - -15.2  -5.44119   CTCATCCTAAAAAAA      CGCCCCGAC-CAGCA GTG TGCTGGGCCGGGGCA      TTGAACCGATTTATC 100 69
C2U40_RS17600 NONE
C2U40_RS17595 3821210 .. 3821229 - -12.1  -4.90869   AGCAGCAATGAAAAA            GGCCGGC ACCAAG GCCGGCC             TGTTGTCTGCGCTCA 100 46
C2U40_RS17590 3819623 .. 3819644 - -15.9  -4.77036   CGCGAGGATCAAAAA           GGGGAAGCC AATC GGCTTCCCC            TTTTAATGCAAACAT 100 52
C2U40_RS17570 3815658 .. 3815680 - -13.5  -4.00124   TACGCCAGAATGAAA           TCGACCAGC GCGGG GCTGGTCGA           TGCATGACGAAGGGG 100 51
C2U40_RS17540 3808785 .. 3808798 -  -9.5  -5.17353   AGATTTATGAAAAAA               GGGCC GAAT GGCCC                TTTTTGCTGTCTGGG 100 51
C2U40_RS17535 NONE
C2U40_RS17530 NONE
C2U40_RS17525 3806859 .. 3806883 -  -5.6  -5.53288   CTGAATGGAAAAAAA          TAAGCCCACC GCCAG GGTGGGCCCG          CAAGCCTGGCAGGGG 100 42
C2U40_RS17520 NONE
C2U40_RS17515 NONE
C2U40_RS17510 3804159 .. 3804176 - -12.7  -4.72272   TGCGCCCATGAAAAA             GGGGCTC CGAA GAGCCCC              TTTGGACAACAAATC 100 55
C2U40_RS17495 3799591 .. 3799606 - -11.8  -4.76041   GATAGGCATGAAAAA              GGCGCC GCGA GGCGCC               TTGGTCCGAGTCATG 100 52
C2U40_RS17475 NONE
C2U40_RS17470 3795339 .. 3795357 - -11.7  -4.84311   GTTTACATAACAAAA             CAGGGGC ACAAG GCCCCTG             TTTCTATTCTGTTTT 100 29
C2U40_RS17465 3794090 .. 3794110 - -15.4  -5.08601   GCACGGCAACAAAAA            CGGGCCCC GTGAT GGGGCCCG            TTCCATTGCTGCCAG 100 107
C2U40_RS17455 NONE
C2U40_RS17450 3791668 .. 3791726 -  -5.3  -3.29837   GTTCAAACATGAAGA CCTCGTTGACGTAAGGTGGGCGCGATGCA CGA TG-AGAGCACCCACGTTACTGCAACG-GG CCGCAAACTTAAAGT  54 34
C2U40_RS17445 3791204 .. 3791217 -  -2.3  -3.34398   TTGGGCTTCGAAATA               GCGAG CCGC CTCTC                AGTTGATTCAATTGT  45 33
C2U40_RS17440 3790380 .. 3790404 - -21.5   -4.2461   ACCCGCATCAACAAA          CGAGGCCACCC CAT GGGTGGCCTCG          CCATTTGCAATGGCC 100 49
C2U40_RS17430 3786849 .. 3786862 -  -2.3  -2.80816   CTCGCATCTACGAGA               GCAGC CAGC GCTTC                AAGCGGGCGATGTCA  39 4
C2U40_RS17425 3785384 .. 3785404 -  -9.7  -3.89348   AATTTTATACAAGAA            CCTCCCC CCCATAT GGGGAGG            TGAGTCATCTATCAA  81 78
C2U40_RS17420 3784878 .. 3784897 -   -15   -4.8048   TCCGGATACGAAAAA            CGGCAGGC TCAC GCCTGCCG             TTTTCTAGCAAGAAG 100 60
C2U40_RS17415 NONE
C2U40_RS17410 NONE
C2U40_RS17405 3777251 .. 3777277 - -20.9  -6.38039   GAGGCAAAAAAAAAA         CGGGGCAGGCC CAAGC GGCCTGCCCCG         TTTTCATGGCCCTTG 100 47
C2U40_RS17380 3773084 .. 3773112 - -14.5   -3.6761   CGTCGTGAACAAACA        GCAGAGGCCCGGC ATT GCCGGGCCTCTTG        TTTTCACCACCCATT 100 73
C2U40_RS17365 NONE
C2U40_RS17360 NONE
C2U40_RS17355 NONE
C2U40_RS17350 3765273 .. 3765284 -  -7.2  -3.02511   TTTATGGGTTCAAGA                GGGG CATT CCCC                 TCAATGGCCATCGGC  56 26
C2U40_RS17345 3764257 .. 3764270 -  -3.8  -3.99229   ATATCAATATAACAA               CCTG ATTATA CAGG                AGTGTCAAGCCACTC  58 30
C2U40_RS17340 NONE
C2U40_RS17335 3762574 .. 3762590 -    -3  -3.48105   TGAAGCCAGCAAACA              TTCATC TCATC GACGAA              TCAATGCCTGATAAA  49 26
        hflK NONE
C2U40_RS17325 3760419 .. 3760438 - -13.6  -4.87803   GACCGCCAAACAAAA            GGGCCTGA ATAA TCAGGCCC             TTGGGTATCATTGCG 100 47
C2U40_RS17320 3760090 .. 3760119 - -16.7  -3.29144   CCAGTCGCCGGACAA       TAAAAAAGAGGCC AAAG GGCCTCTTTTTTA        TTGTCCGGCAAACAC 100 66
        rplU 3758552 .. 3758565 -  -2.3  -2.60194   ACTCCTCTAATTAAG               CGCTG ATGC CAGTG                ATTTTGACTTCAGTG  38 7
C2U40_RS17305 3758230 .. 3758249 - -16.4  -5.35224   TGCAGAAAAACAAAA            GCCCCGCC TGTT GGCGGGGC             TTCGGATCCTTGCGG 100 48
        obgE 3756810 .. 3756831 - -15.9  -5.61596   ATCCCCATAAAAAAA           CCGGAGCCT GGGA AGGCTCCGG            TTTCTCAGCACCGGG 100 73
C2U40_RS17295 3755074 .. 3755093 -   -10  -5.24129   GCCGGCCATAAAAAA            CGGCCAAC CGAA GTTGACCG             TGTGACAAGGCGCGA 100 47
C2U40_RS17290 3753216 .. 3753229 -  -9.5  -4.72986   GACGCTGACGAAAAA               GGGCC CGCA GGCCC                TTTTCCATTGTCACC  91 46
C2U40_RS17270 3747980 .. 3748013 -  -6.5  -2.78596   GACGGGGCCAGCATA     GGGGCCGGCGGGTGCC ATG GGC-CACGACAGCGCC     CTGACACCAACCTGA  51 190
C2U40_RS17265 3747241 .. 3747261 -  -3.1  -3.86346   GGATTTTGCCAGAAA            CCTCCGGCG TTA CATCCGAGG            CATCTTAGCGAGCGC  56 206
C2U40_RS17225 NONE
C2U40_RS17220 NONE
C2U40_RS17215 3736360 .. 3736406 - -15.5   -3.5511   CGCGACGCACAAACA CAGCGCAAACAAAAATGCCCGTC AAC GACGGGCATTTTT-TATG-GCTG ACGAAGGGGCGCTCA 100 38
C2U40_RS17195 NONE
C2U40_RS17190 3731037 .. 3731055 - -10.2  -2.90763   CTGACATGCCAGAGA             GGCCGCCA CTA TGGCGGCT             TCTTTTCTTGGTCAT  68 86
C2U40_RS17155 3725967 .. 3725981 -  -2.1  -3.81488   CTGCTGCAAACATAA              CTGACC TCCT GGTC-G               TTCCCTGCTTACTGG  51 34
C2U40_RS17150 3724668 .. 3724685 - -14.1  -4.35483   TGTCAGGATAAGAAA             GGGGCGC CGCA GCGCCCC              GGAACAAGGGATGGG 100 45
C2U40_RS17145 3723801 .. 3723822 - -12.9  -3.54543   ATGCACCTGTGCAAA           GGGGCGCCC CGCC GGGCGCCGC            ACTGGATGGGAATGA  90 42
C2U40_RS17140 3722697 .. 3722733 -  -5.7  -3.29263   ACAGGCGCTGGACAA   GCCCGCCATCAAGCGG ATGCTG CCGAT-GCAGGCGGGC    GACATGCACGCCACC  52 163
C2U40_RS17130 3720821 .. 3720842 - -15.9  -3.32022   TGCGGTAGATAGCAA           CAGAGCGCC ATCA GGCGCTCTG            TTTGTTTGCAAGGCG 100 87
        hutX NONE
        hutZ 3716838 .. 3716859 - -17.3  -5.60993   CCGTCCATAAAAAAA           CGGGCAGCC CCAG GGCTGCCCG            TTTTGTCATCTTTGT 100 52
C2U40_RS17085 3712474 .. 3712489 - -11.8  -4.72272   TCCCGCCATGAAAAA              GGGGCC CGCA GGCCCC               TTGTCGTGGTGTGCA 100 45
C2U40_RS17075 3711019 .. 3711036 - -12.7  -3.69663   ATCACCATGCAACAA             GGGGAGC CGAG GCTCCCC              TTTTCCGTTGCTGAT  88 70
C2U40_RS17060 3706397 .. 3706422 - -10.5  -4.86902   CAAACGAGAAGAAAA         GGCACTTTTTG GTGT CAGAAAGTGCC          GATCTTGCTGGCTGG 100 51
C2U40_RS17055 3703425 .. 3703447 - -13.4  -5.03314   GTTATGGGGAAAAAA           GGGGGCATGC CTG GCATGCCCCG           ATGGATTTTATGGTG 100 44
C2U40_RS17050 3700954 .. 3700973 - -12.1  -3.72576   TCTTGCTTGATGAAA            GGCGGGG CTTGGC CCCCGCC             AGTGGCACCTCGCAT  91 67
C2U40_RS17045 3698972 .. 3698985 -  -9.5  -5.15634   CACCCCATGAAAAAA               GGCCC TGAC GGGCC                TTTTTTATTGCGCGG  95 49
C2U40_RS17030 NONE
C2U40_RS17025 3696281 .. 3696301 -  -9.7  -4.28254   CCCCAATACGCAAAA            CGGCCTG TATTGAG CAGGCCG            TTGTCATCACACCAT  85 46
C2U40_RS16975 3685282 .. 3685307 - -20.5  -5.54907   TTCAGAAAATAAAAA         TGGCCCTCCGC ACTG GCGGAGGGCCA          TTTTTATTGTGAGCA 100 321
C2U40_RS16965 3683323 .. 3683365 -  -8.8  -3.27653   ACCTGCAGCAGAAGA TCCAGCGGCAGGCGGCGGCC GGT GCCCGCTGGCAGCCGCAGCA GGTGCGCGCCATCGC  65 347
C2U40_RS16945 3680597 .. 3680617 -  -5.3  -3.57457   TGAAAAAGCAATCAA            CAGCGGCCA GCC TGACCGGCG            TGCCATCACCTTGAG  58 49
C2U40_RS16940 3679784 .. 3679815 - -13.9  -4.79667   AAAACCTAGTAAAAA      CAATGCCAGTCAG GCTTAA CTGACTGGCATTA       GCGCCAGGCGCGGGT 100 67
C2U40_RS16920 3676119 .. 3676144 -  -9.8  -5.65177   ATACGCATAAAAAAA         TCCGAAACCC AACAAG GAGTTTCGGA          TTCTTACACAGCCTG 100 111
C2U40_RS16915 3674773 .. 3674798 - -13.4  -3.13164   TCCCTAAGGAGCTAA         TGCCAGTCAG TTAAGC CTGACTGGCA          TTGTTTTTACTAGGT  85 10
C2U40_RS16910 3673152 .. 3673204 - -19.2  -3.18383   AGCTCTAGCCAGCAA CCGCCACAAACGCAGCGGGGCGGCC CATT GGCCGCCCCGC-ACATTTATCCCGG GGAAGGTGAGCCCCT 100 54
C2U40_RS16875 NONE
C2U40_RS16870 3664675 .. 3664686 -  -7.2   -3.4178   ACGAGGGCATGATAA                CGCG CGAA CGCG                 CCAGGCACCGGGGGG  59 138
         alr 3663531 .. 3663547 - -15.1  -5.76633   CGACACATAAAAAAA              GCCCCGC TAT GCGGGGC              TTTTTGACGTTTTGC 100 52
C2U40_RS16840 3659843 .. 3659871 -  -6.2  -2.62184   CTCTCTCGGATATCA       GAAACATCAGTGA CCAA TCACC-ATGTTTC        TGCTCTTGTCACCCT  50 3
C2U40_RS16835 3659292 .. 3659313 -  -9.4  -4.98522   AAGCGCAGACAAAAA           GGCTCCCC CGATAC AGGGAGCC            TCCATCAATCGGCTT  95 39
C2U40_RS16830 NONE
C2U40_RS16825 3655259 .. 3655270 -  -5.8  -5.00616   GTCCTGCTCAAAAAA                GCTG TGAT CAGC                 GAACTATCCGAAGCC  85 351
C2U40_RS16815 3650996 .. 3651022 - -16.7  -3.10715   TCCACCATCATTCAA         GAAAACCCGGC CCAGT GCCGGGTTTTC         GCTTTTCACGCTTCT 100 380
C2U40_RS16790 3649075 .. 3649095 - -14.7  -2.89154   TAAGATGAGACGACA            CAGCCCGGC ATG ACCGGGCTG            TTTTCTGTCAATGCG  90 33
C2U40_RS16730 3635115 .. 3635135 - -11.9  -3.76226   AAGTTGAGAATAGAA            CCCATAGCC AAT GGCTATAGG            CCAACACAAGCGTCT  88 45
C2U40_RS16725 NONE
C2U40_RS16720 NONE
C2U40_RS16715 3630956 .. 3630999 - -13.5   -3.6422   TATCTTGTTAAAAGA GAACCATATTTATGGTTGG TGTGAC CCAATCATAAATATGATTC TTTGAGATTAGCCTC  93 103
C2U40_RS16690 3627238 .. 3627255 - -14.1  -4.41114   CCAGCAGATAACAAA             CGGGGCC TCGC GGCCCCG              TTTTTCATGGTAACG 100 48
C2U40_RS16665 3623188 .. 3623210 -  -5.5  -2.79831   CCAACCGGCACCAGA           GTGGCTTGA ATCTG CCAAGCCGC           CATCCCTGGCAGTCC  48 45
C2U40_RS16635 3614135 .. 3614168 -  -6.6  -2.87881   GAACCCTTCTAGACA     GCGGCAGGGGTGAG TCTGTG CTCACCCCTGATTC      TGCTGGTATTGACGG  54 13
C2U40_RS16625 3611498 .. 3611523 - -11.9  -5.10526   ATACGAAAAAATAAA         GAAAGGCGGAC ACTA GTCCGCCTTTT          TATTTTACTTTTTTG 100 25
C2U40_RS16620 3609606 .. 3609621 -    -9  -3.15427   AACACGGTCTATTAA              CTGGTG TAAT CACCAG               GATAGTTTGTGTATA  67 336
C2U40_RS16615 3608757 .. 3608782 - -15.5  -3.05963   AGGGTTAGCTTAACA         GATCCGGGAGC AGAA ACTCCCGGATC          TGATGCCATCTAAAA  95 78
C2U40_RS16610 3607456 .. 3607467 -  -5.8  -3.16742   CCCAAGGGGCAGCAA                CAGG CTGA CCTG                 TTTGCCCCGTCCTCC  54 241
C2U40_RS16595 NONE
C2U40_RS16590 NONE
C2U40_RS16585 NONE
        brxC NONE
C2U40_RS16575 NONE
C2U40_RS16570 NONE
C2U40_RS16565 NONE
C2U40_RS16560 NONE
        pglZ NONE
        brxL 3589799 .. 3589810 -  -2.2  -3.76186   CATCGACAAAATGAA                CGAT GCCT ACCG                 ATTCAAACAAAGTAT  51 220
C2U40_RS16545 3588273 .. 3588288 -  -3.3  -3.28712   CCCGGTGCTGCACAA              GACAA CGTTCT TTGTC               AGTCCCCGCGATATG  46 221
C2U40_RS16445 NONE
C2U40_RS16440 3569562 .. 3569581 -   -15  -4.86621   ACCGCCAATGAAAAA            GGCGACCC TACG GGGTCGCC             TTTTTGTCGTCCATT 100 57
C2U40_RS16430 NONE
C2U40_RS16425 3567072 .. 3567082 -  -6.8  -4.18702   ACAATCCTGAATAAA                 CCCT TAA AGGG                 CAGGGATAAATCAGA  72 36
C2U40_RS16420 3566125 .. 3566136 -  -2.2  -3.57406   GCGTCAGTATAAAGA                GTCCG TCC CGG-C                TTGCCTATGACCGCA  49 64
C2U40_RS16415 3565498 .. 3565518 - -12.6  -3.34089   GGTTAACAATCAAGA            CAGGCTCC ACGAA GGAGCCTG            TTGCATGAGGGATCA  83 38
C2U40_RS16410 3564669 .. 3564688 - -12.2  -5.37593   CCGGAAATGAAAAAA            CCCATGAC CGAA GTCATGGG             TAAAAATGAAGACAC 100 55
C2U40_RS16405 3563215 .. 3563227 -  -6.2  -3.05384   CTTGCGCTGATTGAA                GGCG AGCAG CGCC                TGACTGAACTGCTCC  53 399
C2U40_RS16390 NONE
C2U40_RS16385 NONE
C2U40_RS16380 NONE
C2U40_RS16375 NONE
C2U40_RS16370 NONE
C2U40_RS16365 NONE
C2U40_RS16360 NONE
C2U40_RS16355 NONE
C2U40_RS16350 3556435 .. 3556448 -  -3.8  -3.84514   ATGCTAATCACCAAA               GCCA GTAGGT TGGC                GGCCATCCATACCTT  56 43
C2U40_RS16345 3556161 .. 3556171 -  -4.6  -3.46602   TGTGGGAGATGACAA                 CCGG GAT CCAG                 GCTGCTCATCAGTAC  53 19
C2U40_RS16340 NONE
C2U40_RS16335 NONE
C2U40_RS16330 NONE
C2U40_RS16325 3554606 .. 3554621 - -11.8  -4.70583   TTTACGAACAGAAAA              GGCGCC GAAA GGCGCC               TCATTTGAAGGTGAA 100 55
C2U40_RS16320 3554172 .. 3554185 -  -2.3   -2.8785   CAACCAATCACGATA               GGCGA TTTC TCGCT                CATCCTAGGGCAGGC  41 98
C2U40_RS16315 NONE
C2U40_RS16310 NONE
C2U40_RS16305 NONE
C2U40_RS16300 3552974 .. 3552997 - -18.2  -3.83026   GTGTGGCAGATGAAA          CAAGGCCCGC TATT GCGGGCCTTG           TTTATTGCGTTTTTG 100 11
C2U40_RS16290 3552283 .. 3552308 - -16.3  -3.61517   ATTTCCCGTCAATAA         GAAAAGGCCCT CGTG AGGGCCTTTTC          TTTGAGCACACCAGA 100 41
C2U40_RS16230 3545487 .. 3545509 -    -4  -2.70932   CGGCGCTGCCAATCA           TGCACGCCCC CTC GGAGCCTTCA           CGTCAATGCGTTCAA  43 0
C2U40_RS16225 NONE
C2U40_RS16220 3543233 .. 3543246 -  -4.5  -3.04517   AGCCTCGCTCAAAAC               GCGAT ACAG ACCGC                CTCACGACATGGGCA  48 27
C2U40_RS16215 3542730 .. 3542755 - -14.7  -5.75945   ACGCCGCAAAAAAAA         TGGCCGGTGCC CAAG GGCAGCGGCCA          ACACATCAGGGAAAC 100 53
C2U40_RS16210 NONE
C2U40_RS16205 NONE
C2U40_RS16200 NONE
C2U40_RS16195 NONE
C2U40_RS16190 3537706 .. 3537726 -    -9  -3.62046   TCATCCGTGGAATAA           GGCCG-TGC TAGT GCATCGGCC            TTGGAGAGAGTGATG  73 238
C2U40_RS16185 3536419 .. 3536431 -  -5.5  -3.18571   TGGCTTAAAGACATA                GCAAG GGC CCTGC                ACCAGGGTTGGAGAG  52 2
C2U40_RS16180 3535104 .. 3535136 - -18.7  -4.15703   CCTGACAAAGAATAA      TAAAGAAAACCCCGA TTA TCGGGGCTTTCTTTA      TTCTCGCGTCAACGC 100 23
C2U40_RS16160 NONE
C2U40_RS16155 NONE
C2U40_RS16150 3528267 .. 3528303 -  -6.4  -4.00756   CAGCTCACCAAAGAA   GCGGGTACCGGCCGGCC AGTC GGC-AGCCAGCTCCTGC    TTGCCAAGGCCGGCT  68 161
C2U40_RS16140 NONE
C2U40_RS16135 NONE
C2U40_RS16130 NONE
C2U40_RS16125 NONE
C2U40_RS16120 NONE
C2U40_RS16115 NONE
C2U40_RS16110 NONE
C2U40_RS16105 NONE
C2U40_RS16100 NONE
C2U40_RS16095 3520437 .. 3520449 -  -2.7  -3.25515   ACTCAAAAGGTAATA                GTTAA GAT CTAAC                TGATTGATAGCGTGC  45 76
C2U40_RS16090 3519746 .. 3519764 - -13.1  -5.95286   ATCAAAAACAAAAAA             GCCGCCC AAACA GGGCGGC             AAGCGGGTGGATAAA 100 169
C2U40_RS16085 3517906 .. 3517925 -   -15  -5.00616   GGGGTCGTTAAAAAA            GGCGAGCC ATCA GGCTCGCC             AAAGGCTTACAACAT 100 71
C2U40_RS16080 3516816 .. 3516828 -  -4.8  -4.07568   GCCCCGCTGCGAAAA                GAGC GGGAT GCTC                ATGGCCCCCTCAATA  62 35
        galE 3515577 .. 3515596 - -16.4  -5.36441   CCGGCACATAAAAAA            CGCCCCGG CATG CCGGGGCG             TTTTGCTATTCATGC 100 157
C2U40_RS16065 NONE
C2U40_RS16060 3514483 .. 3514502 - -11.4  -4.84527   TGTAGATAGCAAAAA            GGCCACCC TTTC GGATGGCC             TTCTTGACTGAATAA 100 42
C2U40_RS16055 NONE
C2U40_RS16050 NONE
C2U40_RS16045 3500344 .. 3500354 -  -5.4  -3.96531   TTAGAGAGCGAGAAA                 CGTT GCC AACG                 AGATTTATACGTGAC  63 124
C2U40_RS16035 3498918 .. 3498931 -  -4.5  -3.59649   AAAGAACTCGCGAAA               CCACC GACA AGTGG                ATCTTCTCCTTTCAA  55 506
C2U40_RS16030 3497213 .. 3497223 -  -6.8  -2.79212   AATTTAACAAAAAGG                 TGGG CAT CCCA                 GATTTCCTTCTGGGA  53 66
C2U40_RS16025 3495315 .. 3495326 -  -4.4  -3.03771   CTACAGGCTTGAACA                TGTC CCCC GACA                 TCGCACACAGCGGCC  48 191
C2U40_RS16020 3494680 .. 3494705 -  -4.7  -3.04517   ACCCTCTTTGAAAAC         GCCCGATTACGC TTT GC-TAGTCGAGC         CTATATCCCAGCACT  48 54
C2U40_RS16015 NONE
C2U40_RS16010 3491850 .. 3491861 -  -5.8  -3.84719   AGTGTCAAAGGTAAA                GCTG CCGC CAGC                 CGAGATACCACTCTG  62 450
C2U40_RS16000 3490675 .. 3490685 -  -5.4  -3.07816   TCGCCACCTACGCAA                 CAAG TTG CTTG                 AAACAAACATAATCA  50 38
C2U40_RS15995 3489826 .. 3489858 -  -3.4  -4.89567   TGGCAAAACACAAAA     GCTCCGACCGCATCC AGTT GAACA-GGTCGGAGA      AAACTTGCACGGGCC  74 116
C2U40_RS15990 NONE
C2U40_RS15985 3487412 .. 3487424 -  -5.5  -2.67803   CTGCGACGAAAGCCA                TGGCC ATC AGCCA                CCACCCTCCTGTCTG  47 19
C2U40_RS15980 NONE
C2U40_RS15975 NONE
C2U40_RS15970 3482554 .. 3482569 -    -4  -3.30338   ATAATTTCTCTATAA              CTGTCA CATC TGACAA               AAGTATTACTCGAAG  49 44
C2U40_RS15965 NONE
C2U40_RS15960 3481125 .. 3481135 -  -5.4  -2.80443   GCAGAGCGCACCACA                 GTCA AGC TGAC                 ACCCGATTTATTGAT  48 146
        budA 3479200 .. 3479210 -  -2.4  -3.17075   TCCTTGTTAAGCGAA                 GGGC TCA GCCT                 TCTGCGGCGCGGATG  43 19
C2U40_RS15945 3477428 .. 3477463 - -29.2  -2.70932   TTCCTTTCGCAATGA    CAGAGCGCCCCTTGCC GATT GGCAAGGGGCGCTCTG     CGTTGGGCGGACCGC 100 68
C2U40_RS15930 3474934 .. 3474951 - -12.7  -5.38047   CAGGGATACAAAAAA             CCGGAGC AGCT GCTCCGG              TTTTTTTATGGCTTG 100 83
C2U40_RS15895 3468921 .. 3468935 -  -5.6  -4.18018   GCCTGCCATGCAAAA               TGGGGA AAA TCCCCG               CTCTATCACAAAATC  67 266
C2U40_RS15890 NONE
C2U40_RS15885 3466163 .. 3466173 -  -4.6  -3.73402   AGAGTCTTTATTAAA                 CGCC ACG AGCG                 ATCCTCCGCTTGATG  58 10
C2U40_RS15880 NONE
C2U40_RS15875 NONE
        nqrE NONE
        nqrF NONE
C2U40_RS15860 NONE
C2U40_RS15855 3461561 .. 3461590 - -14.3  -5.00616   GTCTTTTGCAAAAAA       TAACGGGCTGACC ATCA GGTCAGCCCGTCG        GTTATCCGGCACGGG 100 69
C2U40_RS15845 NONE
C2U40_RS15840 3457853 .. 3457880 -  -6.4  -3.01712   TCCTCTGCGGGAAGA        GGGGTTTAAATCG GAC CGATTTA-ACCCA        GTCTGTCATCTGAAT  53 83
C2U40_RS15835 NONE
C2U40_RS15830 NONE
C2U40_RS15825 NONE
C2U40_RS15820 3454538 .. 3454575 - -17.1  -3.86897   CTGATGGCGCAGAAA   TGACAAGGCCGACAACC CGTG GGTTGTCGGCCTTGTGG    TCAGTGGCTCACCGC 100 47
C2U40_RS15780 3444656 .. 3444677 - -15.9  -5.38326   TGAACCAAACAAAAA           CGCCTTGCC GGTC GGCAAGGCG            TTTTTCATTGCAACT 100 49
C2U40_RS15750 NONE
C2U40_RS15745 3440345 .. 3440362 -  -4.9  -3.13403   CCCCTTTGACCAACA             TGG-ATGC CCA GCATGCCA             CAGCAACAGCTTGGG  49 63
C2U40_RS15740 3439828 .. 3439857 - -14.4  -4.67048   TTACCGTAAAATAAA       CATCCCCGC-CAG ACGGG CTGAGCGGGGATG       AATAAAGGATAAAAA 100 51
C2U40_RS15735 3438035 .. 3438057 - -11.9  -5.76949   GAGTTGTAAAAAAAA           GAGCCCCCG TCATG CGGGGGCAC           TTGCAGTCATGACGT 100 48
C2U40_RS15730 3436971 .. 3436990 - -10.7   -4.7497   TCTACCGATTAAAAA            GGCCTCC AACAAG GGAGGCC             TCAAATAAATATTAT 100 62
C2U40_RS15725 3435114 .. 3435131 - -12.7  -4.72986   GACGCCCAGCAAAAA             GGGAGGC TTGT GCCTCCC              TTTTCGACAACTCTG 100 58
        rpsB 3428779 .. 3428799 -   -14  -4.35604   TGAATTGACAAGAAA            CAGGGGCC ACAAG GGCCCCTG            CTAACCAATTACATC 100 76
C2U40_RS15695 3427817 .. 3427838 - -15.9  -4.03234   TCCTGGTCATATAAA           GACCGCGAC ATAA GTCGCGGTC            TGGGGAAACGGAAAA 100 51
C2U40_RS15690 3427036 .. 3427049 -  -4.5  -3.91897   GGCGTCATGGACAAA               CGAGC CGAA GCTCA                CGCTTGTCTCACTTG  60 34
C2U40_RS15685 3426357 .. 3426383 - -15.9  -4.84918   CCCACAAAGACAAAA         GCGCCGTGCAG GGGCA CTACACGGCGC         TCGTAATATACCTGT 100 48
        uppS 3425537 .. 3425552 -  -4.6  -3.14672   TTTTAGCAAAAGAAG              CCTCTC TCTT GGGAGG               GGGGTTAGCCGGTCT  49 30
C2U40_RS15675 3424637 .. 3424660 -  -3.8  -2.57795   TGTATGACGAATGGA          TGGCGCCCGCC GCA GGCAAACGC-A          TCAGGCTGAGCATCA  43 38
C2U40_RS15670 NONE
C2U40_RS15665 NONE
        bamA 3419491 .. 3419510 -   -15  -3.10796   TCCCATCATTGAATA            CCCCCACC GCTG GGTGGGGG             CAGAGTCCGTCCTTA  93 38
C2U40_RS15655 NONE
        lpxD NONE
        fabZ NONE
C2U40_RS15640 NONE
C2U40_RS15635 3415371 .. 3415417 - -13.7   -3.8125   CCTTGAATCAAAACA GGC-CCCGCAGGGCCTGGCGTCA CGT TGGCG-CAGCCCCTGCGGCCGCC CTGAAGTTATCTGCC 100 32
C2U40_RS15630 NONE
C2U40_RS15625 NONE
C2U40_RS15620 3410222 .. 3410248 - -23.8  -5.40072   GCTCGCCCAAAAAAA         GAAGGCCCCCGC AGA GCGGGGGCCTTC         CAGCATGGAGCGACG 100 50
C2U40_RS15615 3408120 .. 3408146 -  -5.1  -3.39018   GCAGCACGGTAAACA        CCGGCG--CCAGC TCG GCTGGTTCGGCGG        TTCAGAGGTTCGGCG  54 228
        cadB 3406192 .. 3406231 -  -3.6  -3.70902   TGCTCCACACGTAAA  GGGGCGCTCTCCA-TCA GGGATGG TGAGTGAAGAGCGCTCG  GAAAAGGAAAACGGA  53 42
C2U40_RS15605 3404007 .. 3404022 - -11.8  -4.64766   CCCAGATGGGAAAAA              CGGGCC TTGC GGCCCG               TTGTTGTCACTCTCG 100 42
C2U40_RS15600 3403044 .. 3403093 -  -7.2  -2.71712   GGCCCGGTCGCAAAC CGCTT-GGC-GCGCGCC-AACAAGT GCA ACTGGCCAGGCGCGCCGGCTAAGCG CCGCCATCAGGCCGG  53 32
C2U40_RS15585 3398805 .. 3398824 -   -15  -5.60993   CCGGCCATAAAAAAA            GCCGCCTC TTGC GAGGCGGC             TTCTTCATTCAAGCG 100 55
C2U40_RS15575 3396684 .. 3396706 -  -5.5  -2.64045   CGATGGCAAGAATAT           GCAGCGCTT TATTC AGGCACTGC           GTCCGGTTAGCGCCT  47 15
C2U40_RS15570 3395295 .. 3395311 - -15.1  -5.07486   GACCTGCAACAAAAA              GCCCCGC ACT GCGGGGC              TTTTTTTCGGGTTAC 100 37
        tilS 3388460 .. 3388489 - -22.3  -3.02511   GCCAGCCGCTGAATA       TGACAAGGCCGGC ATAT GCCGGCCTTGTCA        TTTGCAACGGATAGG 100 42
C2U40_RS15535 3385384 .. 3385428 -  -8.5  -3.60792   GGTCGAAGCCTGAAA TGGGCC-CTTGAGGGTGGGC CGACAC GCCCGCCCGCAAGCGACTCA CTCACCTGTGGCAAG  69 64
C2U40_RS15510 3380984 .. 3381026 - -22.2  -4.00348   GCTTAAGGAATCAAA CCCAAACAGAGAGGGGAGCC AGT GGCTCCCCTCTCTGTTTACA CCAGCCGTTCAGACA 100 70
C2U40_RS15500 3377356 .. 3377373 - -12.7  -3.73068   GTGGCAATGCAACAA             GCCGGTC TATC GACCGGC              TTTTTTTAGGTTCAT  91 37
C2U40_RS15475 NONE
C2U40_RS15470 3371440 .. 3371457 - -14.1   -4.7254   AGGGGTCATGAAAAA             GCCCGGC GCAG GCCGGGC              TTTTCACTCTGTGGC 100 46
C2U40_RS15465 3370761 .. 3370786 -  -7.5  -3.53811   GTCACCCGCCGGAAA         GGT-GCAGCCGG CAG CCGGCCGTTACC         AGCTGCGCACCGGCC  64 21
C2U40_RS15460 3370391 .. 3370405 -  -8.5   -5.4833   GCAGCCAATAAAAAA               GCGCC GGTCA GGCGC               TTTTTTATATGGGCA 100 58
C2U40_RS15445 NONE
        zipA 3364161 .. 3364180 -   -10   -5.1356   GCGGACCAATAAAAA            TGCGGCAC CTGG GTACCGCA             CTTTTTATTCATTCG 100 55
        ligA 3362053 .. 3362081 - -21.9  -3.29144   TCAGCGCCCCCATAA        CAAAGAACCCGGC CAT GCCGGGTTCTTTG        TTTATCTGATTGAAG 100 48
C2U40_RS15425 3358451 .. 3358472 - -11.6  -4.26903   GCCACCCCATGAAAA           TGGCCCCT TGCAAC AGGGGCCA            GCGTTTCATCGTTAC  93 46
C2U40_RS15420 NONE
C2U40_RS15415 3357611 .. 3357630 - -13.6  -5.67967   AGCAGCATAAAAAAA            GCCAACCC CATC GGGTTGGC             TTTTGGCAAAGCGGC 100 47
C2U40_RS15410 3357085 .. 3357113 - -13.1  -3.82031   GCAAGCAGCAGTAAA        CAGCAACCCCGGC CAG GCCGGGGTTGTTC        ATTACTCCACTTCAA 100 27
C2U40_RS15380 3352501 .. 3352519 -  -8.8  -2.60813   GAGGCCCGCAAAGAG             GAGCTGCC CAT GGCAGGTC             GTGCCTGCCTCAGGG  59 120
C2U40_RS15375 NONE
C2U40_RS15370 3349202 .. 3349212 -  -2.4  -2.73994   AGCCTTGCAACATCA                 GGAC GCG GACC                 AATAGTGCGGGCGCC  39 12
C2U40_RS15365 NONE
C2U40_RS15360 3346765 .. 3346799 - -13.7  -4.57073   TAGCCTCGGCAAAAA     TCAACCTGTGGCAAC CTGGT ATTGCCACAGGTTGC     CAGGCCGACGAACAA 100 143
C2U40_RS15345 3342689 .. 3342706 - -14.1  -3.71848   TCCCGTGATCAACAA             GGGCGCC TGCG GGCGCCC              TTTTCATTGCTTAGA 100 51
C2U40_RS15335 3339186 .. 3339202 -  -5.1  -3.91642   AAAAGAATCATCAAA              GGGTC TCTTGTG GACCC              ATCTTAACCACGAAA  63 61
C2U40_RS15330 NONE
C2U40_RS15325 3336813 .. 3336844 -  -6.5  -3.53091   ACTTCCCCGCCTAAA      GCAACCGGTTCAG CCCTGC CCGAGCCAGTCGC       GCAGCACGCTATCCC  58 3
C2U40_RS15320 NONE
        phoB NONE
        phoR 3334117 .. 3334134 -  -8.3  -5.46129   TAACAAATGAAAAAA             GGGCCGC CATC GCCGCCC              TCTTTTGATGCCAAC 100 57
C2U40_RS15305 3332778 .. 3332795 - -14.1  -5.47846   AACCAAAAAACAAAA             CGGGCCC CGCA GGGCCCG              TCTGGCAAAGGAAAC 100 45
C2U40_RS15300 NONE
C2U40_RS15295 3331357 .. 3331371 -    -5  -2.94235   GGAGAGAGATCAAAG               CAAACG AAA CATTTG               TCGCTGCAGGCAGGG  47 5
C2U40_RS15290 3330350 .. 3330364 -  -5.6   -2.7083   GATCTCATAAATTGA               GCAAGG CGG CCCCGC               GCACCCCGCCGGCGC  48 0
C2U40_RS15285 NONE
C2U40_RS15280 3329374 .. 3329393 -  -4.9  -2.64422   AGAGAGTTCACACTA            GCCGGCA GAGGGG CGCCGAC             ACGCGGCGCCCTTCT  45 75
C2U40_RS15275 3328599 .. 3328626 - -19.2  -5.65513   GATGAACCAAAAAAA        CAGACGGCGACC CGAG GGTCGCCGTCCG         TATCAATCAAGCCAG 100 46
C2U40_RS15265 3326297 .. 3326307 -  -2.4  -2.87683   ACATGCCGGCAGATA                 CCGC TGC GGGG                 TACCACGGGGCCGCC  41 42
C2U40_RS15260 NONE
C2U40_RS15255 3324704 .. 3324738 -  -4.2  -3.25823   TGCCCGCTACATCAA     GAGCTTCCATCACG GCAGCTT CATGGTGGAGGCCC     ACGGGCGGTTCGAGT  48 213
C2U40_RS15245 3323916 .. 3323946 - -24.2  -3.53012   TCCCCCGCCCCGAAA       CAAAACGGGCAGCC AGT GGCTGCCCGTTTTG       CATGCTGGGTGTGCG 100 41
C2U40_RS15235 3322279 .. 3322300 - -13.7  -3.30701   CGCCAGCAAACGCAA           GAGCCAGGC GATG GCCCGGCTC            TTTGCAGAAGTGGGC  95 97
C2U40_RS15230 3321231 .. 3321254 - -16.8   -3.6502   CAGGCCGGATGCAAA          GAGGGGAAGC CGCG GCTTCCCCTC           TTTCGTTTCATCCAG 100 50
C2U40_RS15220 3317779 .. 3317798 - -13.6  -5.61596   ACGCCCACAAAAAAA            GCCACGAC CCGG GTCGTGGC             TTTTCGTTGGAATGG 100 53
C2U40_RS15205 3314122 .. 3314143 - -15.9  -3.33815   ATCCCGCTCAAGCAA           GATGCCGCC CTCA GGCGGCATC            TGTCTGTATGGCGGC 100 14
C2U40_RS15190 NONE
C2U40_RS15185 3309534 .. 3309551 - -11.3  -5.28176   GCGATGCACAAAAAA             GGGATGC CGAG GCATCCC              TTTTGCTTTGCGCCT 100 52
C2U40_RS15160 3304232 .. 3304250 - -11.7  -5.54192   ATGAACCTAAAAAAA             TGCCGCC TCGAT GGCGGCA             TTTTTGTCAAAGCTC 100 48
C2U40_RS15150 3301344 .. 3301361 - -12.7  -5.07486   CATCCCCAATAAAAA             GAGCGCC TTGC GGCGCTC              TTTTGCTGTGGGAAC 100 61
C2U40_RS15135 NONE
C2U40_RS15130 NONE
C2U40_RS15125 3293964 .. 3293984 -   -14  -4.13728   GATAGATGCGGAAAA            GGCGAGCC ATCGG GGCTCGCC            TGAAAAGTGCGGGTC 100 51
C2U40_RS15120 3291397 .. 3291414 - -12.7  -5.24531   ACTTCTCATAAAAAA             GGCGACC ATCC GGTCGCC              TTTTCTATTTCTATC 100 60
C2U40_RS15105 3287678 .. 3287708 - -10.4  -3.62522   GAAGTGTGGCAATAA       GGGGCAATAAAGTG GAA CGCTTTGCTGCCCC       CTGGCCAGGTGACAG  77 70
C2U40_RS15090 NONE
C2U40_RS15085 NONE
C2U40_RS15080 3284525 .. 3284544 -   -10   -2.5194   CAATGATGGATGAAG            CGG-GAGCC TGC GGCTCACCG            GGCCGCACCACGCGG  65 303
C2U40_RS15075 3283765 .. 3283780 - -10.4  -6.02919   CCAGAAACAAAAAAA              CACGCC CGGG GGCGTG               TCGATACCACACTTT 100 55
C2U40_RS15055 3278664 .. 3278675 -  -5.8   -4.2528   GTGCAAGTGAACAAA                CAGC TGGA GCTG                 CCCGGCATCATCAAG  71 450
         cls 3276941 .. 3276954 -  -5.2  -3.05384   CTTGGGGCTAGGCAA               GCGC AATTCG GCGC                CTGCCGCAATTAAGT  50 45
C2U40_RS15040 3275563 .. 3275592 - -19.5  -4.18018   CCCGGCCACTGAAAA       CAACAAAGGCTCC CGCG GGAGCCTTTGTTG        TATGTGCACGAAAGC 100 49
        ribB NONE
C2U40_RS15025 3273098 .. 3273115 - -11.3  -6.11644   TCAGGCAAAAAAAAA             TGGCGCA TAAC TGCGCCA              TTTTTTTCGCATGGA 100 41
C2U40_RS15010 3270585 .. 3270602 - -12.7    -5.252   GACGGCCATAAAAAA             CCGGGCT GTCG AGCCCGG              TTTAAGTGAGGTTGG 100 80
C2U40_RS15005 3269501 .. 3269529 - -19.7  -5.00616   GCGCTCCCCAAAAAA        CAAGGGGCATACC ATC GGCATGCCCCTTG        TCGTTGTCCCGCTTC 100 48
C2U40_RS15000 3268494 .. 3268515 - -14.5  -4.71828   ACGCCATCAACAAAA           CAGGCTCAC CGAG GTGAGCCTG            TTTTTTTCAATACGG 100 71
C2U40_RS14985 3265927 .. 3265953 - -12.3  -3.18054   CCCTATAATGCAAGA         GGCCCAAGCTG GCTGG CAGCTTTGGCC         TTGAAGATGGCGGAG  81 33
C2U40_RS14975 NONE
C2U40_RS14970 3261521 .. 3261571 - -28.1  -3.34088   AGCATTACACACCAA TCCTATAAACAACAACGCCGCAT GTCTT ATGCAGCGTTGTTGTTTATAGGA TCTCCGGGCTCTGCT 100 90
C2U40_RS14960 3260196 .. 3260208 -  -3.3  -3.13728   ATGATTGATACTTAA                CCAAC TGT GATGG                CGCTGCGCTGGTCAT  45 9
C2U40_RS14955 3259560 .. 3259581 -  -9.5  -3.57309   CAAAAGCGCGCTAAA           GAGTGCTTG CTAA CAAACACTC            TGCTACCAAGATGGC  73 67
C2U40_RS14945 NONE
C2U40_RS14940 NONE
C2U40_RS14935 NONE
C2U40_RS14930 NONE
C2U40_RS14925 3249901 .. 3249911 -  -8.2  -2.76696   CCTTCCTGTAACAAC                 GGGC GAG GCCC                 CGATGTCGTCTCGGT  60 112
C2U40_RS14920 NONE
C2U40_RS14915 NONE
C2U40_RS14910 NONE
C2U40_RS14905 3244143 .. 3244158 -  -7.6  -3.55966   GGACGAAAATAGTAA              CTGAGA CATG TCTCAG               CTGATTACCCTAGAC  64 450
C2U40_RS14880 3241472 .. 3241495 -  -2.2  -2.52464   TTCCCCTCGAACCTA          TACGGGTGGC TATC GCTTCCCGAA           CTGGACTGTCACAAC  38 11
C2U40_RS14875 3240705 .. 3240731 -  -3.7  -4.88326   AAACAAAAAGTAAAA        CCATCTGCGCCT ACCA AAGCGC-GATTG         CTCAGAGCAATTGCC  76 133
C2U40_RS14860 3236375 .. 3236391 -  -4.3  -3.44529   TGAGACAGTAAGTAA              GGGGAAC TGC GTCCGCC              GCTGCCGCATTTGCG  51 494
C2U40_RS14840 NONE
C2U40_RS14835 3231888 .. 3231919 -  -7.3  -3.40371   GACTGGATGAACTAA      CACCGGATCAACG CTCCAT CGTTGATCTCGTG       GATGTTTTGATTGAT  60 517
C2U40_RS14820 NONE
C2U40_RS14815 3230387 .. 3230423 -  -3.8  -4.63486   ATTCGGGCAATAAAA    GTCCTGACTGTATATC GAGTA GATATACAGTCAAATT    AACTATTCTTGTCAG  70 114
C2U40_RS14810 NONE
C2U40_RS14805 NONE
C2U40_RS14800 NONE
C2U40_RS14795 3226567 .. 3226581 -  -2.8  -2.78547   GGATTTCAGCAATCA               TGGG CCATACT CCCA               TCAGGTGGTGCGATA  41 1
C2U40_RS14790 3225768 .. 3225778 -  -4.6  -3.46602   GGGTCGACATGATAA                 GCCA CCC CGGC                 AATCCCGCCTTCCCC  53 461
C2U40_RS14780 NONE
C2U40_RS14775 3221838 .. 3221854 - -11.5  -6.08342   TAACAAACAAAAAAA              CCGGCCA TGA CGGCCGG              TTTCAGGTTCAGGAG 100 52
C2U40_RS14770 NONE
C2U40_RS14765 3217527 .. 3217558 -  -9.4  -4.07687   ACTTTTTTCTGAAAA      TCAAGGCGGCCTTC CCCG GAAAGCCGCGATGA       ACCTTTTTTTATGGC  81 53
C2U40_RS14745 3212252 .. 3212268 - -10.8  -5.64274   GCAGGCATAAAAAAA              CCGGCC GCGAG GGCCGG              TGAAACAGTTCAGGC 100 190
C2U40_RS14725 3207151 .. 3207177 - -12.9  -2.67441   CAAGTCATGACACCA         GGCCCGCCGCC TAGCT GGCGGCAGGCT         CTCGGTATTGCTGAT  81 9
C2U40_RS14720 3206055 .. 3206067 -  -6.9  -2.72049   GAGAGGGGGCAAGCA                GCCCG TAA CAGGC                GATGCGAGGGCAGAT  53 114
C2U40_RS14715 NONE
C2U40_RS14710 NONE
C2U40_RS14705 NONE
C2U40_RS14700 3201907 .. 3201938 - -12.9   -4.8543   GAATGGGTAGAAAAA      GCAGACGGGCCGC ACCCTG GCGGCCCGCACGC       CCTTAGCCGCGGGCA 100 28
C2U40_RS14695 NONE
        fliJ 3199853 .. 3199867 -  -3.4  -4.10161   CATCACCTCGGAAAA               GCCGAC CTT GCCGTC               GCTCTGCAGGGCCCC  58 228
C2U40_RS14685 NONE
        fliL NONE
C2U40_RS14675 NONE
        fliN NONE
        fliO NONE
        fliP 3194733 .. 3194743 -  -4.6  -2.70932   GCTCGCCCTTAACCA                 CCGG CGC CCAG                 CCCGAAGCTGTTGGC  46 8
        fliQ 3194405 .. 3194425 -  -8.2  -3.33315   GCAACAGGCGCAGAA            GGCCGCTC TGCTC GAGCGGGC            CCCTCATCCCACCAC  65 29
C2U40_RS14650 3193462 .. 3193482 -  -6.1  -3.06501   CACAGGTCGAGGCAA            TCCGGCA TCCAACC CGCCGGA            GCGCCGTTGTTCAGT  53 113
        flhB 3192262 .. 3192276 -  -4.3  -3.49835   GCCAATAATACAAGA               CATTG AAATA CAATG               ATTTTATTTTGACTG  53 54
        flhA NONE
        flhF NONE
C2U40_RS14630 NONE
C2U40_RS14625 3186973 .. 3186986 -  -9.5  -3.34517   ATTCCCTCCTAAATA               GCCGC CAGA GCGGC                TCACTTACATGATGC  69 107
C2U40_RS14620 NONE
C2U40_RS14615 NONE
C2U40_RS14610 NONE
C2U40_RS14605 NONE
C2U40_RS14600 NONE
C2U40_RS14595 NONE
C2U40_RS14590 NONE
C2U40_RS14585 NONE
C2U40_RS14580 3178581 .. 3178598 -  -2.7  -2.78596   TATCTTCCTATCAGA             GGGAA CCGATATC TTCCC              ACTCTTCATCGGAGA  41 3
C2U40_RS14575 3178143 .. 3178166 - -13.2  -4.27617   GAGAGGGGAGGAAAA          TCAGGAAGGC GGAT GCCTTCCCGA           GCATTCATGAGCGGC 100 30
C2U40_RS14570 3177381 .. 3177392 -  -2.2  -3.52073   CGCGCAACATCAGAA                CTAC TCCT GCAG                 CAAGGGTGTGAGAGA  47 14
        ccmB 3176715 .. 3176729 -  -7.1  -2.52464   GCTTTCGTCAATTCA               CGCTG ACTCG CAGCG               CCGCCGAGACCGCCA  52 3
C2U40_RS14560 NONE
        ccmD NONE
C2U40_RS14550 NONE
C2U40_RS14545 NONE
C2U40_RS14540 NONE
C2U40_RS14535 NONE
        ccmI 3170740 .. 3170772 - -10.4  -2.92246   TTAATCTGAATTATA      GGCAGCCCGGCCCC ATCGA GGGGCCGGGCCAAA      GGCGTATTAGAGGGC  68 32
C2U40_RS14525 3169837 .. 3169852 - -11.8  -4.85129   AGCAGAGACGAAAAA              GGCGCC CGCA GGCGCC               TTTGCTACGTTACTC 100 59
        grxD 3168503 .. 3168521 -   -16  -5.63517   TTGTGAAATAAAAAA             GGGGAGCC AGT GGCTCCCC             TTTTTGCATGATGCA 100 50
C2U40_RS14505 NONE
C2U40_RS14500 3164681 .. 3164702 - -15.9  -5.00616   GGCGGCTGCAAAAAA           GAGGGAGGC TCAC GCCTCCCTC            CCTTGGTATACCCTT 100 65
        pdxH NONE
C2U40_RS14490 NONE
C2U40_RS14485 NONE
C2U40_RS14480 3161100 .. 3161119 -   -15  -4.84914   ATGCAGATAACAAAA            CGGCAGCC CGCA GGCTGCCG             TTTGCGTTGCTCATT 100 36
C2U40_RS14475 3157523 .. 3157538 - -11.8  -5.14477   GACAGAGGTAAAAAA              GGCGCC CGAG GGCGCC               TTTTTTGTTATTTGC 100 130
C2U40_RS14375 3136133 .. 3136149 - -11.5  -3.85518   AACAGCAATGAACAA              GGGGGCA TGG CGCCCCC              CGAGGTAGGGTAACA  88 51
C2U40_RS14370 3134868 .. 3134900 - -16.4  -4.08064   AAGGCCGCCTCAAAA     TAGCA-ACCGCCGCC CTCA GGCGGCGGTGCGCTA      TCTGGCCAGCAGCTC 100 23
C2U40_RS14350 3130715 .. 3130735 - -15.4   -5.4756   AACCGCAATAAAAAA            CCCCCGCC GTGCT GGCGGGGG            TTTTGCATTCTGCCG 100 77
C2U40_RS14335 3127716 .. 3127754 -    -5  -2.73364   TCCGGATCCGAAGCA   GCCCCGCCGGCGCCTGAC TCG GACAGGCTCCAGCAGCAT   CCCTGCTTATCCCGT  46 32
C2U40_RS14330 3126265 .. 3126283 - -13.1  -5.54192   ATGAACCTAAAAAAA             CCGGCGC TCATG GCGCCGG             TTTTGCATTTCAGGG 100 47
C2U40_RS14310 3121487 .. 3121508 -  -2.2  -3.53012   CGGGTCTTTCTCAAA           CAGCAGGGA GCGGA TCCC-GCAG           CACTGGCGGAGGGGC  47 391
C2U40_RS14300 NONE
C2U40_RS14295 NONE
C2U40_RS14290 3114770 .. 3114793 - -18.2  -3.56594   CCAAACGTTTGGAAA          GGGCCACCTC GCAA GAGGTGGCCC           TTTTTTATTCCTCTA 100 85
C2U40_RS14275 NONE
C2U40_RS14270 3111817 .. 3111827 -  -3.2  -2.62616   CCATGGTGGATATCA                 CATC AGT GACG                 GATAGGCAGATCGTT  40 55
C2U40_RS14265 NONE
C2U40_RS14260 3107641 .. 3107680 -  -3.3  -3.91798   CAACGGTCAAGCAAA  TCTGCTGCGGGGTGGGC TCGGTG GCCAGGCTCGCGGCAGA   GGCTAACTCTTATAC  55 292
C2U40_RS14255 NONE
C2U40_RS14250 3105700 .. 3105710 -  -2.4  -3.29043   AAGCCGCCGCGACAA                 CCGC GCA GCCG                 CTCTTATTTGTTACA  45 50
C2U40_RS14245 NONE
C2U40_RS14240 3101744 .. 3101762 -  -4.5  -2.90498   CAAAAACAAAGTAAT             CCGCTCA ACAGA TGAGCCG             CGTCAATCTGGTTTT  47 79
C2U40_RS14235 NONE
C2U40_RS14230 NONE
C2U40_RS14225 NONE
C2U40_RS14220 3093641 .. 3093653 -  -5.5  -3.90856   AATTGTCGAACGAAA                CAGGG TCT CCCTA                TTTTTGGATCGCTGC  63 70
C2U40_RS14210 3093003 .. 3093016 -  -5.2  -3.68445   AAAAACTGGGAATAA               CGCC TTAAAT GGCG                AAGAAACGGTCTAAA  58 36
C2U40_RS14190 NONE
C2U40_RS14185 3087989 .. 3088018 - -12.9  -2.53911   CTAACGTGGAAGTGA       GCGG-CCTGCGC GGTTTTT GCGCAGGTCCGC       TCGACTGAAGGGTTA  80 45
C2U40_RS14180 3087125 .. 3087148 - -14.6   -3.3482   TAACGCCTGAATTAA          GCCG-CGCCAC GAA GTGGCGTCGGC          TTGAATGAATTGTTA 100 97
C2U40_RS14175 3085823 .. 3085846 -   -16   -3.3482   TAACGCCTGAATTAA          GCCG-CGCCGC GAA GCGGCGTCGGC          TTGAATGATTGGTTA 100 58
C2U40_RS14170 3085405 .. 3085415 -  -2.4  -4.71482   AGGAAATGTGAAAAA                 CTCG CTG CGGG                 GCAGTTGCCATACGC  66 199
C2U40_RS14115 3080453 .. 3080465 -  -5.5  -4.18763   AACAAATTGGGAAAA                GGGAC CCC ATCCC                CTCCTCCAGTAACTG  67 49
C2U40_RS14095 NONE
C2U40_RS14090 3073714 .. 3073724 -  -2.6  -4.53398   TAAGACTAAAAACAA                 TTTA CTC TAAA                 GTTATCTAATGTCAC  63 51
C2U40_RS14085 3072430 .. 3072452 -  -4.2  -4.42464   AACTCTTTAAATAAA          GC-TCGAGT CTCAGT ACTCGATGC           CAGAGAGGTGGCTAA  65 297
C2U40_RS14065 NONE
C2U40_RS14060 3068428 .. 3068441 -  -9.5  -5.15634   GACGGGATCAAAAAA               GGCGC CAAG GCGCC                TTTTTTATATGCGGT  95 97
C2U40_RS14040 3064798 .. 3064830 - -14.2  -3.88583   TAAACGGCGGATAAA     GATAGGGGCCG-TGC TTTC GCAACGGCCCCCACC      CCCCACTCGGTGTGG 100 46
C2U40_RS14030 3062891 .. 3062901 -  -4.6  -3.64703   CTGCGTTCAGTCAAA                 GGCC CGC AGCC                 GCGTGACCAGCAGAT  55 6
C2U40_RS14025 3062307 .. 3062335 - -14.6  -4.42464   AATCCGCCAAATAAA        GAAGGGCCAGCC GACAA GGCTGGCCCTTA        TTGTATCTTGTCAGC 100 67
C2U40_RS14005 3058741 .. 3058770 - -17.3  -2.69468   TATCCGCAGACATCA       CGAAAAAGCCCCGC TGG GCGGGGCTTTT-CG       GCAGAGTCAGGCCAG 100 57
C2U40_RS14000 3057688 .. 3057717 - -12.9  -4.64676   GCACCGCCAACAAAA       GAGAAGCCCCGGGC ACT GTCCGGGGCTT-TC       TTTTATCGGACGCAA 100 67
C2U40_RS13960 NONE
C2U40_RS13955 3048024 .. 3048059 -    -4  -3.70902   TCGGTGAGACTCAAA    TCGGCCAGACACATCAC CCC GAAATGTGTC-GATCGA    CAGTCACTCGCGGCG  53 3
C2U40_RS13950 3046846 .. 3046857 -    -3  -2.60075   TGCTGTTCAACCAAG                TCAA ACTA TTGA                 GTCGGTTTTGTAACA  40 19
C2U40_RS13945 3046245 .. 3046257 -  -6.3  -4.00122   GGAGAAGAAATATAA                TCCTT ACC AAGGA                TACCTTCCGTAGCCC  65 122
C2U40_RS13930 3042344 .. 3042369 - -11.8  -2.94032   ATGGCCGAATGAAAG         GGGCGGACGG ACCGTG CCGTCCGCCG          TCCGGTTACATAAAC  75 31
C2U40_RS13925 3041108 .. 3041127 -   -15  -5.43414   AGGACAGATAAAAAA            CGGGAGGC GATG GCCTCCCG             TTTTGCTTTTCTTTG 100 49
C2U40_RS13905 3036554 .. 3036568 -  -3.4  -3.54424   CGTCAGCTCGGCAAA               CGACCC GCC GCGCCG               ATGGAGGGGAGCGAG  51 70
        bioB NONE
        bioF NONE
        bioC 3031040 .. 3031055 -    -6  -3.03441   GATGACTCCTCAATA              CGGGGC CGCT GCCCGG               GCTCGCGATGGCGGG  53 77
        bioD 3030308 .. 3030320 -    -2  -3.35798   ACCTGTCACGCATAA                TAGA CAGTT TCTA                TGAATGTTCGCTGAA  45 49
C2U40_RS13870 3029319 .. 3029338 -   -15  -4.61873   GCGCACAAAGCAAAA            CGGCTGCC CGAG GGCAGCCG             TTCTCATTGGTACGG 100 46
C2U40_RS13850 NONE
        nifJ 3018557 .. 3018573 - -15.1  -5.12707   CCAAATGCCAAAAAA              GCGGGCC AGT GGCCCGC              TTCGTTTTATGCAGA 100 54
C2U40_RS13810 3011176 .. 3011197 - -13.1  -3.29591   AGGAGGCAAATGGAA           TCAACCCTG CCAG CAGGGTTGA            TTGTTACAAGGGGTA  89 106
C2U40_RS13805 3010807 .. 3010825 - -17.4  -2.92157   GAGTAATCGGACAGA             GGCCCCGC ATC GCGGGGCC             TCCTGTTACCAGCTG 100 31
C2U40_RS13780 3006504 .. 3006530 - -22.4   -4.4891   GTGACCACCACAAAA         CAACAGGGCCCG CGA CGGGCCCTGTTG         TTGTTGATTCAACGG 100 46
C2U40_RS13770 3003275 .. 3003292 - -14.1  -5.28176   GTCATCCATAAAAAA             CGCCGGC ACTT GCCGGCG              TTGTTGTGTTGGGCG 100 56
C2U40_RS13760 3001553 .. 3001570 - -11.3  -5.61596   ACGGCCATAAAAAAA             CCGATGC CTGG GCATCGG              TTTTTCACTATCCGG 100 54
C2U40_RS13725 2992927 .. 2992944 - -12.7  -3.78409   CTAATGCAAGGGAAA             GGCCGCA TTGC TGCGGCC              TTTGCTGCCGGTAAC  91 44
C2U40_RS13720 2992059 .. 2992076 - -12.7  -5.22006   CCATCACAAGAAAAA             CGGCAGC TGAG GCTGCCG              TTTTAACGGGGGCGA 100 76
C2U40_RS13715 2990020 .. 2990038 -   -16  -4.08557   CTTGCGAAACAACAA             CGGCAGCC AGT GGCTGCCG             TTTTTATTGATAGAT 100 215
C2U40_RS13695 NONE
C2U40_RS13690 2982229 .. 2982266 - -15.7  -3.14026   CACACGCACAGTCAA   CCTTTCCCAAGCCCGAT GGCC ATCGTCCTTGGGAAAGG    CGGGTCTTGCGACCC 100 66
C2U40_RS13685 2980269 .. 2980288 -   -15  -4.29106   TCCCAGATCAAGAAA            GGGCAGGG TCTC CCCTGCCC             TCTTCTGTTATCAGG 100 36
C2U40_RS13675 2978974 .. 2978995 - -15.9  -3.28924   CAGCCTCTCTGACAA           CAAGGGCCC CGCG GGGCCCTTG            TTGTTTCTGACTCAG 100 37
C2U40_RS13650 2976229 .. 2976239 -  -3.2  -2.76737   GATGAACCGTTAAAT                 TGCG CCG CACA                 CCCGGGCGATCACCT  41 9
C2U40_RS13645 2974452 .. 2974498 - -15.3  -3.17194   ACGGCTCCAACTCAA GCGCAATAAAAAAGAGGAGCC ATCAA GGCTCCTCTTTCACATTCCGC GAGTGCTTGAGTCGA 100 43
C2U40_RS13635 2972574 .. 2972631 -  -7.7  -2.87683   AGAGCCTGGCACAGA TCGAGCAGATCCTG-A-GCTCGGCTGC CTCCCC GCTGGCGGGCGTGCAGGCCCTGCTCGA TGCAGTGGCCCGGGA  58 365
C2U40_RS13625 2971528 .. 2971546 - -17.4  -5.36441   CTGCCAGATAAAAAA             GGCGGCCC TCA GGGCCGCC             TTGCCAACCATCCAC 100 67
C2U40_RS13580 2961835 .. 2961853 -    -3  -4.46212   GTCCCGATGAGAAAA             GCCTGTGC CCA GCACATCC             TGGTCAAGACCGAGA  67 291
C2U40_RS13565 2958830 .. 2958846 -  -3.5  -3.53224   CAGCCCCCCGCGAAA              GACGCAG CCG CAGCGGC              CAGAGAAAAATACGT  51 199
C2U40_RS13560 2954985 .. 2955004 -   -15  -4.82901   CGCCGCCCATAAAAA            CGGGAGGC TTGC GCCTCCCG             TTTTTGTCTCTTCCT 100 46
C2U40_RS13545 2953975 .. 2953990 - -11.8  -4.17701   GCCAGAAACGACAAA              GGCGGG ATCT CCCGCC               TTTTTGCTGCCCGAA  93 59
C2U40_RS13535 2950658 .. 2950681 -    -8   -3.1355   TCCATTGAGAGGCAA          TGCCACCGCC CGTT GGCGGTGGTG           TTATATTCCCTCATT  61 61
C2U40_RS13530 2948723 .. 2948740 -  -2.6  -3.61715   CAGCCGTCTCAATAA             GCGTGA CTCAGC TCGCGC              TCGGACATGAAGCGC  49 1
C2U40_RS13525 2947303 .. 2947321 -   -11  -6.34424   CTGGCAAAAAAAAAA             CGGCCATC CAT GATGACCG             TCGAAAGTAACGAAG 100 242
C2U40_RS13520 2946453 .. 2946491 -  -3.5  -2.63596   CCCCACTCTATAGCA   CCGGGCGGGATGCTCAG TGACC CCGGGCCGCCAGCTCGG   CAAACCAGTGCGCCG  43 0
C2U40_RS13515 2945758 .. 2945771 -  -6.7  -3.17714   GGAAATTGTCATCAA               GTGGA GCTT TCCAC                CGTCTATCAGATCAG  53 183
C2U40_RS13505 2944606 .. 2944631 -  -9.8  -5.65177   ATACGCATAAAAAAA         TCCGAAACCC AACAAG GAGTTTCGGA          TTCTTACACAGCCTG 100 135
C2U40_RS13500 2943242 .. 2943258 -  -2.1  -4.25873   GCTTCATAAAAAATA              CCCCGCC AAA AGCGGTA              ATGCCAGTCAGTTAA  58 37
C2U40_RS13485 2940037 .. 2940047 -  -4.6  -2.78463   AGCTGGCCGAGGATA                 CCGG CTA CCAG                 CCCTGACGCGCCATG  46 19
C2U40_RS13475 NONE
C2U40_RS13470 2937511 .. 2937528 - -12.7  -4.63048   CCCAGAAATAACAAA             GCCGCCT CGAC AGGCGGC              TTTTTCATGCGGTTA 100 46
C2U40_RS13450 2932045 .. 2932073 - -11.1  -2.90813   TATGTGGTCAAACCA        CGCACTTTATGCA GGA TGCACAAAGTGCC        AAAATTCCGACGCAT  71 216
C2U40_RS13445 2930528 .. 2930560 - -17.9  -4.62471   AATTCACATATAAAA      TCAAAGCCTTGAAGC TAG GCGTCAAGGCTTTGA      CCCTTATGCTTCCTT 100 29
C2U40_RS13440 2929380 .. 2929390 -  -6.8  -2.78935   ACACCTCCCACCACA                 GCCA ACC TGGC                 CGCTGCAATATTCAT  53 58
C2U40_RS13435 2927888 .. 2927927 -  -5.1  -3.85698   GGGGTCCCTTATAAA GGCGCCGAC-CCTGTGCTGC GAT GCAG-ACAGGAATCGG-GCT CATAACGCCGAGGCC  61 116
C2U40_RS13430 2927019 .. 2927042 - -16.8  -3.46236   AGTAATAAAATGCAA          CAAGGGAGGC CCAG GCCTCCCTTG           TCATTTCTATCTACC 100 93
C2U40_RS13415 2924418 .. 2924444 - -15.1  -3.51934   GGGGCGGGAGAAACA         GCGGAGCCGGC GGGAT GCCGGCTCCGT         TTGCGCGCCAGCTGG 100 63
C2U40_RS13410 2923234 .. 2923250 -  -3.6  -2.94329   CATTGCTAACGAAAG              CGGCTA CTCCT TGGCCG              GCGCGAAAAACCGCA  45 94
C2U40_RS13405 2922329 .. 2922347 - -17.4  -4.39166   CTTGAGATAGCAAAA             CCCCGGCC ACT GGCCGGGG             TTTCTTTTTATTCAT 100 80
C2U40_RS13385 2917220 .. 2917249 - -14.3  -4.06765   ATACAGAAAATATAA       CGCGCGAAGGCGGC CTC GCCGACTTCGC-CG       TTCTCAGTCGGCGGA 100 29
C2U40_RS13380 NONE
        pstA NONE
C2U40_RS13370 NONE
        phoU 2911292 .. 2911306 - -11.4  -5.52096   AAAGGCAACAAAAAA               GGCGCT CAA AGCGCC               TTTTTATTCATCTCA 100 44
C2U40_RS13360 NONE
C2U40_RS13355 2909198 .. 2909231 - -19.7  -4.00038   CACCAGGATGAGAAA     CGACAAGAGGCCACC TGAA GGTGGCCTCTTGTGG      CGACAGGTGCACTGA 100 45
C2U40_RS13345 2906609 .. 2906630 - -15.9  -4.96848   TGTCGCAGACAAAAA           GAGAGCGCC CAAG GGCGCTCTC            TTTCATTGTCGGTCA 100 49
C2U40_RS13335 2904644 .. 2904676 - -26.5  -4.82901   CGCCGGCGATAAAAA      GCAGAAGAGGGAGCC CAT GGCTCCCTCTTCTGC      TTATACCGAAACCCT 100 79
C2U40_RS13315 2900213 .. 2900231 -  -2.2  -3.78934   GTGCTCCCACAAGAA             TTCGGCGG GTG CCGCCACC             GGCTTCGTCGGGTTG  52 213
C2U40_RS13270 2890445 .. 2890474 - -18.7  -3.66732   CAATCAGCCCAACAA       CAAAGAGGCGACC CCAG GGTCGCCTCTTCG        TGAGAACCAGGCATA 100 48
C2U40_RS13265 2888858 .. 2888875 - -14.1  -4.09628   CATTGCAAACAACAA             GGCGGCC CTGG GGCCGCC              TCTTCTTTATACCGG 100 118
C2U40_RS13240 2882369 .. 2882381 -  -7.7  -3.75332   AGCTTGGAAGTGAAA                GCGTA CTG TACGC                CCAGCAGGGTTTCGT  69 452
C2U40_RS13230 2881012 .. 2881030 -  -5.9  -4.87133   ACGTGGCAAACAAAA             GCGCCCA TCTGG CGAGCGC             TTCGTCAACTCTTTA  81 95
C2U40_RS13225 2879680 .. 2879703 -   -21  -4.99972   AGAAAAGACGAAAAA          GCCCGCCGGG TCTC CCCGGCGGGC           TTTTTACTGAACAGA 100 56
C2U40_RS13210 2876659 .. 2876678 - -11.4  -2.82015   GGGAGAGCGAGGAGA            CATGCCGC CGCG GCGGCACG             TCTCCGGGCAGATCA  73 38
C2U40_RS13205 2874561 .. 2874582 - -18.7  -4.20868   CTGCCAAAACAACAA           GGCCCCGCC GATT GGCGGGGCC            TTCTGTTATCTGTGA 100 54
C2U40_RS13190 2872164 .. 2872174 -  -3.2  -3.07895   GGGATGGCTAAGAGA                 CGAC GCT ATCG                 GCAGGCAGCGGCAGC  43 7
C2U40_RS13180 NONE
C2U40_RS13175 2869668 .. 2869692 - -18.7  -3.74658   AAACAAGCAGGCAAA          CAGAACCCGGT CAG ACCGGGTTCTG          TGTGTATCCAGATAA 100 149
C2U40_RS13170 NONE
C2U40_RS13165 2868113 .. 2868138 - -19.1  -2.83271   CGAGCGCCACAACGA         GAGAGGGAGGC CTGT GCCTCCCTCTC          TTTGTCATTGATGCT 100 46
C2U40_RS13135 2861967 .. 2861984 -  -9.8  -5.07486   CATGCGCAACAAAAA             CGGCGC ACGCAG GCGCCG              TTTTTTTATGCCCGC 100 79
C2U40_RS13130 2861521 .. 2861560 - -15.8   -3.9009   AATTGAGCTGATAAA  TGAAGTGCGGCCATCGGCA AGC TGCCGATGGCCGCAGG-CA  ATGCTGGCAATGTAG 100 42
C2U40_RS13110 2856825 .. 2856841 -  -3.7  -2.85437   TATCAACATTAACCA              GCGAT GTGAGCG ATCGC              TTCCACTTCCACCCT  45 2
C2U40_RS13105 2855465 .. 2855495 -  -8.2  -4.44974   TGAAACCTTATAAAA      GGGCCGCCGACCC GGGCAA GGG-CGGCAGCCG       ACAGGGACACTCAGG  85 36
C2U40_RS13100 2854754 .. 2854771 - -11.3  -5.55855   CGTAAAAAAACAAAA             CGGGTCA ATGC TGACCCG              TTAATGCTGGCTGGC 100 48
C2U40_RS13095 2854031 .. 2854051 - -12.5  -5.24129   TGCGCTCATAAAAAA            TGGCTCGCC AAT GGCGAGCCG            TTTTGGTCTGGGTCA 100 38
C2U40_RS13085 2852540 .. 2852557 -  -3.3  -3.39895   TTGTCTACCAATCAA             CTGTGCC GAAT GGCGCAA              AGATGGCCGAGTAAA  47 72
C2U40_RS13080 2851823 .. 2851837 -  -7.8  -2.92921   ACAGAAGGTGATAGA               GACGCT GAC AGCGCC               AGCCCTACCGCCGGC  53 270
C2U40_RS13065 NONE
C2U40_RS13060 2847113 .. 2847131 -   -16  -5.45802   TCGCCAAAACAAAAA             CACCGGCC TGT GGCCGGTG             TTTTTCACTGTCAAC 100 60
C2U40_RS13045 2844370 .. 2844388 -  -5.3  -3.14344   GATCGTGCGCACCAA            GGTGCGCT AAGC AG-GCACC             TGCCTGCGTCCCCTC  52 39
C2U40_RS13015 2840677 .. 2840705 - -15.3  -4.72986   TATCCCCACCAAAAA        CAACAAGGCCCCG TGA CGGGGCCTCATCG        ACAATCCTTGTCCCT 100 49
C2U40_RS13005 NONE
        cydB NONE
C2U40_RS12995 2836257 .. 2836276 - -13.6  -4.75308   AGCAAGATGCAAAAA            GGCCGACA CCTG TGTCGGCC             TTTTCATGGCTGCGT 100 42
C2U40_RS12960 2830580 .. 2830609 - -16.5  -2.61831   TTGAGCTGAAAAACG       TGAGAGGCCGACA GCAA TGTCGGCCTCTCT        TTTTTAGCGCCGCCC 100 128
C2U40_RS12945 2826225 .. 2826245 - -11.1  -5.23316   GATGAGACGAAAAAA            GGCCCCG GCAGATG CGGGGCC            TTGGGGAGTTTACCT 100 77
C2U40_RS12940 2825392 .. 2825411 - -10.6  -2.80091   AGGCTGAAAACGAAG            CGGCCGCC CGAT GGCGGCCT             GGTGCTGGAACGGGT  70 51
C2U40_RS12930 NONE
C2U40_RS12925 2822400 .. 2822418 - -13.1  -5.38047   CACCGACATAAAAAA             GCGGGGC ACCTG GCCCCGC             TTGCATTCCCGTGTT 100 53
C2U40_RS12920 2820987 .. 2821019 - -16.3  -3.19522   TGATTCAAGAGGCAA      CGAGGTGCCACCGCC TCG GCCGATGACACCTCG      ATTGTTCAATCAGTG 100 59
        tyrA 2819755 .. 2819782 -   -20  -4.13945   AGCGGGAGTGCAAAA        GCAAAAGGGGCC GACA GGCCCCTTTTGC         TTTTGGTTATCGTCA 100 38
C2U40_RS12860 2805201 .. 2805224 - -12.5  -5.27335   CCCGTTAAATAAAAA          GACACCGCA GCGAAG TGCGGTGTC           TTTTTGCCAAAACTG 100 55
C2U40_RS12855 2803641 .. 2803665 -  -7.7  -2.91239   GAGAGATTTGAGAGA          GTGGGAGGCCA TTG CGGCCTCCCGG          GTAGTGCGTGCTTAC  58 37
C2U40_RS12850 NONE
C2U40_RS12845 2801007 .. 2801044 -  -2.8  -3.55622   TTGAATCTTTGCAAA  TCGTGATAGCGGGGGGAG TCAG CTCCCCCGGCCAT-A-AA   CTTAACCTTTCACGC  49 27
C2U40_RS12840 2799774 .. 2799791 - -12.7  -5.10461   GGCAGGCAATAAAAA             GCCGGTC TTGC GACCGGC              AAAAAGGCATTGAAT 100 75
C2U40_RS12830 2797923 .. 2797939 -  -9.4  -5.12172   TACGAACAAACAAAA              GGGAGC ACTCG GCTCCC              TTTTTCACGATCATC  95 83
C2U40_RS12810 2794086 .. 2794117 - -24.6  -4.46212   TTCGCCATCATAAAA      CGACAAGGGCGCAC CGAG GTGCGCCCTTGTCG       TGGGTGAGAGCTGCT 100 47
        arsC NONE
C2U40_RS12795 2792686 .. 2792702 -  -9.4  -5.64274   GCATCCATAAAAAAA              CCGGAC TCCAG GTCCGG              TTTGCACAGAGCAGG 100 57
C2U40_RS12790 2791336 .. 2791351 - -11.8  -5.24129   TGCGGCCATAAAAAA              GGCCCC GTGA GGGGCC               TTCTACCAACGCTTC 100 42
C2U40_RS12780 2789292 .. 2789323 - -24.6  -3.63694   ACCCACCGCCAACAA      CGACAAGCCCGGCA CTGC TGCCGGGCTTGTCG       TTTAAAAGAGGGGAG 100 75
C2U40_RS12770 NONE
C2U40_RS12765 2786100 .. 2786136 - -15.2  -2.61274   TCCATTGCAACTAAG   CGGGCCCATCG-CTCCC TTGC GAGAGACAACGGGCCCG    ATGACTACAGACTAG  95 107
C2U40_RS12760 NONE
C2U40_RS12755 2784547 .. 2784562 - -11.8  -5.28176   CGCAGCCACAAAAAA              GCCCGC AATT GCGGGC               TTTTTTTATGGCGTT 100 40
C2U40_RS12735 2778109 .. 2778130 - -17.3  -3.12327   TCGCCAGATGCAACA           GCGCCGACC CTGG GGTCGGCGC            TCTCTTGTGGCTGTG 100 46
C2U40_RS12730 NONE
        pbpC 2770615 .. 2770655 - -10.4  -2.68088   CGGGAAATCGACAAT  CCGCTGACGGCATCGGAG CCATC CCCCGATGCCGTCAATAT  TCTGACACACCAAAG  66 55
C2U40_RS12715 2767898 .. 2767943 - -13.9  -3.81146   CCGCTCAACGAATAA GCCCCCTTTGCGGACTTCAGG ACTA CCTGATGTTCACCGAGGGGGC TTTTTGTTTGTGTTG 100 42
C2U40_RS12710 2766309 .. 2766326 - -11.3   -5.1675   CTATTCATGAAAAAA             GGGAACC TTGC GGTTCCC              TCTTCGTCATTACTT 100 476
C2U40_RS12655 2755532 .. 2755560 -  -4.7  -3.29634   AGAATTAATCAAAAT        GATTTCAATTGGT TAT AACAATCAAAATC        GGTCGCTGCATGAGA  51 216
C2U40_RS12650 2754681 .. 2754717 -  -8.7  -2.83271   CTATGTGGACAAGTA    CGGTAACTGGGCTAACC AGA AGCTGACCCAGTTACCT    AATCGCTAAAGCACA  60 89
C2U40_RS12635 2752370 .. 2752387 -  -8.4  -5.96894   AGTGAAATAAAAAAA             TCCGGC ACATTG GCCGGA              TTTTTTATGCACGCT 100 52
C2U40_RS12620 NONE
C2U40_RS12615 2749684 .. 2749704 - -11.1  -5.19328   ACGGCACAATAAAAA            GAGGCCGGA AAA TCCGGCCTA            AAACGAGCATACGCT 100 203
C2U40_RS12610 NONE
C2U40_RS12605 2747924 .. 2747937 -  -2.3   -2.8547   AGTTTTCATATCAGA               TCTCG TTAT CGAGC                AGCAACCCGACGCGT  41 7
C2U40_RS12600 NONE
        fliS NONE
C2U40_RS12590 2745644 .. 2745658 - -11.4  -3.15503   GGCGAACAGGCAACA               CCGCCA GCA TGGCGG               CTTCCTGTTCTTTTT  77 106
C2U40_RS12585 2743590 .. 2743607 - -12.7  -5.55769   TTTCACAATAAAAAA             CACCGGC CAAC GCCGGTG              TTTTTTATTTAGTAG 100 62
C2U40_RS12555 2737117 .. 2737146 - -20.9  -3.67597   GCCGCCAGCCAATAA       CAAACAACCCGGC CAGA GCCGGGTTGTTTG        GGTGCCTGCCAATGC 100 80
C2U40_RS12545 2735160 .. 2735188 -  -8.9  -4.91873   CATATGAATGAAAAA        TCCCCTGTGAG TTGAGCC CTAACAGGGGA        TTCAGGATGTCAGCC  93 119
C2U40_RS12540 NONE
C2U40_RS12535 2733441 .. 2733465 -    -3  -3.34209   TGAACATAAGTAAGA          TCAATTTATT TTTCC ACTAAATTGA          TGGGAACTTTTAAAA  47 377
C2U40_RS12530 2733170 .. 2733191 - -10.2  -4.85618   AAAGAATTAAGAAAA           GGGATAGC GTTGAT GCTATCCC            TTTTTTCGTTTGTTC 100 39
C2U40_RS12510 2727497 .. 2727517 -    -6  -3.34501   ATACAAGGCGGAGAA            CCCGCACC GGCCG GGAGCAGG            ACACTCCCTAGGCTT  56 148
C2U40_RS12505 2726153 .. 2726170 -  -9.8  -5.24129   GCGGCCCATAAAAAA             CCCGCC GGCTTG GGCGGG              TCTTTTTTATGCGCT 100 45
C2U40_RS12490 2724712 .. 2724729 - -12.7  -4.70659   TTCCAGATGTAAAAA             GAGCGCC ACCA GGCGCTC              TTTATCAAGTTCAAC 100 45
C2U40_RS12485 NONE
C2U40_RS12480 2721886 .. 2721913 - -12.8  -3.83205   ACCGCCCAGATTAAA        GGCTGATG-CCCA AAC CGGGTCATCAGCC        TCATCACATTAGTTT  91 135
        gcvT 2720391 .. 2720406 -  -3.2  -2.87132   GGCGCGTTCGACAGA              CGTTGC CGGG GCAAGG               GGGTCTGGCGAAGGG  42 66
        gcvH 2719919 .. 2719944 - -17.6   -2.7094   GGGCACCTATACAAG         CGGGCCCTGC GCATTG GCAGGGCCCG          GGGGCATTACTCTTC 100 32
C2U40_RS12465 2716761 .. 2716780 - -13.6  -5.23292   CGACACAAAAGAAAA            TGCCCTGC AATT GCAGGGCA             TTGTTGGTTTCCAAC 100 67
C2U40_RS12455 2715192 .. 2715204 -    -2  -2.71644   ACTATACAAGAATAG                TTGA AGTGA TCAA                GGCGGCTTGGTACTG  39 53
C2U40_RS12450 NONE
C2U40_RS12445 2714283 .. 2714295 -  -4.1  -2.97747   CGGGGACATGAGAGA                CTCCT ATC AGGAA                GAACGAGGCAATTGA  45 75
        arsA NONE
        arsB NONE
        arsC 2710798 .. 2710843 -  -9.5  -2.70932   CCTTGTGCTGAATCA GTGCGGGATCAGGGCCGAGTC AATC GCCCCGCCCCTCATCCTGCCC CGAACGCAACTGGCA  63 98
C2U40_RS12425 2709753 .. 2709766 -  -2.3  -2.67707   CGACATGAAGAAGAT               CGATG ATGC CCTCG                CCGCCAAACCCGCCC  38 285
C2U40_RS12415 2708167 .. 2708185 - -14.6  -5.16841   CCAGATGAACAAAAA             GCCGACTC ACT GAGTCGGC             TTTTTTTGTTGCTAC 100 52
        queA 2703507 .. 2703529 -  -6.9  -3.85817   AGGGCCCGGTATAAA          GGGCG-TGGC TTAT GCCTGCGCCC           GGCGACGGGTGACGA  68 12
C2U40_RS12390 NONE
C2U40_RS12385 NONE
        secD NONE
        secF 2699069 .. 2699086 - -14.1  -4.29304   GGACGATAAGAGAAA             GGGCGCC TCGC GGCGCCC              TTGTCATTTACGGCA 100 33
C2U40_RS12370 2698496 .. 2698514 -  -8.9  -3.17051   TGGGGAGCAGCAACA             GGATACC AAGGA GGTATCC             AATCCCTTTCCTGAC  63 137
C2U40_RS12365 2697536 .. 2697552 -  -9.4   -4.8048   CCCGGACAGCAAAAA              GGCCTC GCAAT GAGGCC              TTTTCTACATCATTC  95 61
C2U40_RS12350 2694342 .. 2694397 -  -2.7  -4.66163   ATCTTCAGTCAAAAA TGGCGCGCAATTGTAACATAGCCAA TCGCTATT TTGGCACCGT-A-AATGGCGCGCCA ATTCACAACAATGAC  68 488
C2U40_RS12340 2693547 .. 2693590 -  -7.6  -2.89191   GCATATGGTCACATA CCCGACTAAATCAGTCAA GTATTTGG TTGAGTAATCCAGTCGGG TTTAATCCTGCGGTC  58 27
        iscR NONE
C2U40_RS12330 2691710 .. 2691726 -  -5.1  -3.02461   TAATTCCGTTGAACA              CCGATCC CGC AGATCAG              TGATGAGCCCATTCG  50 22
C2U40_RS12325 NONE
        iscA NONE
C2U40_RS12315 2690322 .. 2690338 -    -8  -3.32769   GCGTTAAAGGATCAA              GACTCG AACAG CGAGTC              TTCGAATCGTTCCAG  62 5
        hscA NONE
         fdx 2688009 .. 2688033 -  -5.6    -5.252   CACGGGCACAAAAAA         GGCCGC-TCCC TCAA GGGTCACGGCC          TTCACCATATCATTA  88 94
C2U40_RS12300 2686403 .. 2686441 - -13.1  -2.89564   CCCTGACTGCACAGA  CGCCGTGCCGCCTGCTGG ATAT CCAGCAAGGGGCT-GGCG   GTCACCAGATGGATC  82 227
C2U40_RS12290 2684521 .. 2684536 - -10.4  -5.45813   GACCAAAAAACAAAA              GGGAGC CGAG GCTCCC               TTGGGGTTCTTTCGA 100 47
C2U40_RS12285 2683291 .. 2683302 -  -2.2  -3.78329   GCTTAGCAAGTTAAA                CCAT TTTG ACGG                 AAATCCCATCCTGTT  51 9
C2U40_RS12280 NONE
C2U40_RS12275 2681557 .. 2681572 -    -4   -2.6927   ATGGCGGACAGATTA              CTC-CTG CGG CAGTGAG              AGGCGAGCAGTCCGG  43 7
C2U40_RS12270 2680401 .. 2680419 - -12.4  -3.30507   AGCAACCTAAAGACA             GGGCCACC CTG AGTGGCCC             TTGGTTGCTCAACCC  83 34
C2U40_RS12265 NONE
C2U40_RS12260 NONE
C2U40_RS12255 2677133 .. 2677158 - -14.7  -4.06384   TCTCAAGACGACAAA         GGCTCCGGGTC CGAA GACCAGGAGCC          GGATATTCAGATTGA 100 48
         der 2675572 .. 2675603 -  -9.4  -4.07687   ACTTTTTTCTGAAAA      TCAAGGCGGCCTTC CCCG GAAAGCCGCGATGA       ACCTTATTTCTTGGC  81 29
C2U40_RS12240 2673930 .. 2673945 - -11.8  -3.99062   AACACGCAGCATAAA              CCCGGC AATC GCCGGG               TTTTTTATCGCCTCA  90 38
C2U40_RS12225 2668016 .. 2668032 - -10.8  -5.60993   GCCGCCATAAAAAAA              CCGGCC ACAGG GGCCGG              TTTTTTGTTTGCGAT 100 47
C2U40_RS12105 2642323 .. 2642333 -  -4.6  -3.37881   CCAACACAAAGGTAA                 GGGC ACA ACCC                 CCATGCCGGACCTGC  51 178
C2U40_RS12100 2641945 .. 2641967 - -14.9  -5.38054   CGCCAGAAACAAAAA           CGGCATGGG GGAAA CCCATGCCG           TTTTGCGTTATCGAG 100 46
C2U40_RS12090 2640461 .. 2640478 -  -2.5  -2.90322   GGGTATCAGAATAAT             CCCCGGC CGTT GCCCGGC              CATCCCTATCCAGGC  41 41
C2U40_RS12085 2639625 .. 2639645 -  -7.5  -2.80622   ATATAGCGCATGACA            TCCCTCCTG AAG CAGGAGGAT            GACGTTAGCCAGCAG  57 91
C2U40_RS12080 2638560 .. 2638589 - -19.5  -5.00616   TTTCTTCTCAAAAAA       TAAAACAGGGCGC CTTG GCGCCCTGTTTTA        TTGAGTGAACCTTAA 100 37
C2U40_RS12055 2633143 .. 2633169 - -13.6  -4.66609   CACTCTACCCAAAAA         CAGCGAGGGGCC CAA GGCCCCTCGCAT         TAGCAGCGCCGCAGA 100 49
C2U40_RS12050 2632318 .. 2632333 -  -2.4  -3.82083   GGAGCACAAGGGAAA              GCCAGG ATCA CGCGGC               GCTGGCGACACCGCC  51 71
C2U40_RS12045 NONE
C2U40_RS12040 2630849 .. 2630874 -   -14  -3.48924   CTATCTCTGATATAA         GACGAGGCCG GTCAAG CGGCCCCGTC          TCATCAAGCATGGTC  95 29
C2U40_RS12030 NONE
C2U40_RS12025 2627558 .. 2627576 -   -16   -4.7254   AGCCGCCATGAAAAA             CGCCTCCC ATC GGGAGGCG             TTTTTTGTTGCTCTC 100 55
C2U40_RS12015 2625961 .. 2625982 -  -8.7  -2.90496   GGTTGTTTTAAATTA           TCTGCGCCA TCCA TGGTGCAGA            CGACTGACATCAGTT  61 35
C2U40_RS12010 2624190 .. 2624210 - -18.3  -5.37345   GCCAATGATAAAAAA            GGGCGGCGT GAC ACGCCGCCC            TTTTCTTGCATCAAG 100 43
        ihfB 2623820 .. 2623837 -  -9.9  -5.98675   CATAAAAACAAAAAA             GGCATAC CCAA GTATGCC              ATTTTCTGCATTATT 100 36
C2U40_RS12000 NONE
C2U40_RS11995 2622191 .. 2622209 -   -16   -3.6692   TTCGACCTGAAAACA             CCAGGCCG CAG CGGCCTGG             CTCATGATCTTGTGC 100 47
C2U40_RS11990 2621395 .. 2621418 - -15.3  -3.11634   CCGTACATGATGCAA          TGCCGGCCC CACATC GGGCCGGCA           TTCTGTCCATTATCG  95 35
C2U40_RS11980 NONE
C2U40_RS11975 NONE
C2U40_RS11970 NONE
C2U40_RS11965 NONE
C2U40_RS11960 2617889 .. 2617903 - -11.4   -5.4505   CGGCGCAATAAAAAA               CCTCGC ATC GCGAGG               TTTTTTATTGTCTGT 100 51
C2U40_RS11950 2615269 .. 2615292 - -12.4  -4.64334   AAGCCCCCAACAAAA          CCAAGGGGCC TGGC GGCCCCTTGT           TCTTTTTATGCGATG 100 31
C2U40_RS11945 2614580 .. 2614596 - -13.7   -5.5112   GCCAGCAACAAAAAA              GGCGCCA AAT TGGCGCC              TTTTTCTATCCACTC 100 59
C2U40_RS11935 2612542 .. 2612553 -  -7.2  -2.52543   ACGGGGCGTAATTTA                GGGG AAAG CCCC                 CCCGGCGTCAACGGC  52 82
C2U40_RS11930 2612332 .. 2612373 - -26.3  -3.53012   CCGCCCGTCGCCAAA TAAAACAAAAGGGCCTGTC ACAA GACAGGCCCTTTTGTTTTA  TTTGGCGGTGAGGGA 100 28
C2U40_RS11925 2611970 .. 2612003 - -16.9  -3.97368   TCTTCAACCCATAAA     GTAAAAGGGCCTGTC TTGC GATAGGCCCTTTTAC      TTTGTTTGGTTATGA 100 32
C2U40_RS11920 2610883 .. 2610910 - -19.2  -4.65747   TAAGCGTTAAGAAAA        CAAGGGGCACCG CACG CGGTGCCCCCTG         ATGGGCAAGTTACGC 100 35
C2U40_RS11915 NONE
C2U40_RS11910 NONE
C2U40_RS11905 NONE
C2U40_RS11900 2602767 .. 2602779 -  -4.1  -4.56436   CACCAAAGAAAACAA                CTCCA GTG TGGAA                TGTTTCAACATACAA  67 30
C2U40_RS11895 2600916 .. 2600944 -  -6.8  -5.64873   TTCAAGAATAAAAAA        TCCCTTCACCAT GCAAA ACAATGAAGGGA        CTGAAGGACATAATA 100 142
        tssB 2599870 .. 2599889 -  -5.6  -3.19192   GTTCAGTCAATCCAA            CCCGGCGA TCAC TCGGCAGG             CTTAATCAAATCCAG  52 14
        tssC 2598345 .. 2598355 -  -5.4  -3.13371   TATCCCAGGAAGAGA                 GATG CGG CATC                 GGGCCTTATTCCTTG  52 31
        tssE NONE
        vasA NONE
        tssG NONE
        tagH NONE
        tssJ NONE
        tssK 2591965 .. 2591977 -  -5.5  -3.09516   CTCGGCATGATCGAA                CAGCA GGT CGCTG                AGTTGCTCGTTCTTG  50 80
C2U40_RS11850 2591206 .. 2591225 -  -2.8  -3.26471   GTAGCTCTATACGAA            TCAAGGCG TGCT CTCCTTAA             GTATTTATTTTAATA  45 30
        clpV 2588549 .. 2588577 -    -6  -3.38046   GGGCCAGGGCAAATA        CGAGGGCTTG CTCCATACT CAAGCCCCCA        CCTCGGCCACAAACT  56 15
C2U40_RS11840 2587013 .. 2587029 -  -2.9  -2.78073   AGCAGCGGTAACAAG              CCGAGGA TGC TCATCAG              TTCACCTCCAGTTTC  41 22
        tagO 2586395 .. 2586418 -  -6.6  -2.62396   CAGGCGTGCACACCA          GGGGTGTTGA TAGC TCATCGCCCC           TCCTACCAGCGGCAC  52 28
        tssA 2584979 .. 2584989 -  -4.6  -3.31461   CATTCATTTCGACAA                 CGGC GCC GCCA                 GGCTCTCCAGGCGGT  51 3
        icmF 2581414 .. 2581432 -   -16  -3.21912   CTTCCAACGCAGGAA             GGGGGCAC TGC GTGCCCCC             GACGCGATCAAGAGA 100 33
C2U40_RS11820 2579882 .. 2579912 -  -4.7  -3.03243   ATCCATTGCGCAAGA       CAGGGCAAGTTTC CCGGC AAACCTTGCCTTG       CCAGTCAAACTCACC  48 76
C2U40_RS11815 NONE
C2U40_RS11810 2576968 .. 2576979 -    -3  -4.03995   TTTTGGAGAAAAAGA                CAAA GATA TTTG                 ATAGCCAGAATCATT  58 405
C2U40_RS11805 2573828 .. 2573850 - -13.4  -4.80167   GAGGAAAAATGAAAA           GACACCAGCC TGA GGCCGGTGCC           AGGTGACGCACAGTC 100 481
C2U40_RS11780 2570835 .. 2570857 -  -9.9  -6.02919   GGATAAATAAAAAAA          CCGGCAAGCC GCAA GG-TTGCCGG           TTTTTTTATTGCTGC 100 85
C2U40_RS11770 NONE
C2U40_RS11765 2567684 .. 2567703 - -13.6  -5.18357   GAATTCAGCAAAAAA            CCCCAACC TTCC GGTTGGGG             TTTTTTGTGGTTTTC 100 55
C2U40_RS11745 2565157 .. 2565180 -  -3.7  -3.53012   CCGGTGCTGCTCAAA          CGGCTGGAG GGGCTG CGCCAGCAG           ATGCGCCAGCAACCG  51 310
C2U40_RS11735 2562624 .. 2562679 -  -6.1  -3.11192   CAGACCAGCATCGAA GGGGTATTTGCC-GCCGGT-GATGTGG CTGA CCACACCTACCGCCAGGCCATCACCTC GGCCGGCACCGGCTG  51 104
C2U40_RS11720 2560235 .. 2560261 - -16.7  -3.80733   CCGACTCGATAAGAA         GAAACGAGCGG ACCGG CCGCTCGTTTC         TGAATGTCGTGACTT 100 75
C2U40_RS11715 2557541 .. 2557565 -   -15  -4.38712   GCTATCTCGATAAAA          GGCCACGCCC GCAGG GGGCATGGCC          AGGATGATAGAGGGG 100 47
        lolA NONE
C2U40_RS11705 2555219 .. 2555231 -  -4.8  -3.53094   TCGAAATCAAGAAGA                TGGC ACCAG GCCA                AGACAAGCGGGGTCA  53 206
C2U40_RS11695 2553734 .. 2553759 - -17.7  -2.60079   CGACGCCAGAATGCA         CAACGCCATGG CATG CCATGGCGTTG          TCGTCTGCAATGAGC 100 43
C2U40_RS11690 NONE
C2U40_RS11685 2551511 .. 2551528 - -12.7  -4.09628   GAGCGGAAACAACAA             TGGGGGC CAAG GCCCCCA              TCTCGTTGCAACACC  95 57
C2U40_RS11680 2550530 .. 2550549 - -10.7  -5.82281   AAAGAGACAAAAAAA            TCCCGGC TCAGGG GCCGGGA             ATTGCGCTCAAAAAT 100 93
        pspA NONE
C2U40_RS11640 NONE
        pspC 2542408 .. 2542431 - -10.2   -3.1355   TTCATCCAGAGCGAA          GGGGGATGGC CGCT GCCACCCCGC           GCCATGGCCCCCTCG  70 99
C2U40_RS11630 2540922 .. 2540970 -  -2.8  -3.63744   CTTCTCCTGAAAATA GTCTCCCGGGTACGGCGCAGGC AACAA GCCCGTGCCGCACACCGGTTAT TCGAGGTGATCCCCG  51 22
C2U40_RS11625 2539795 .. 2539818 - -18.2  -5.02074   TTACCCCTCAAAAAA          GCAGCCGACC CAAG GGTCGGCTGC           GGCGGACAATTGTAA 100 80
C2U40_RS11620 NONE
C2U40_RS11615 2538343 .. 2538378 - -18.2  -4.85599   GCCAGCCCATAAAAA    TGCGGGCCCGCCCCGT TTTC ACCGGGCAGGCCCGCG     CCATCTACAGACGTT 100 161
C2U40_RS11605 2536549 .. 2536560 -  -7.2  -3.19642   ATCAGCACCCAGGAA                GGGC GGTT GCCC                 GCGAGGGGTGAGCCG  57 176
C2U40_RS11600 2535960 .. 2535983 -  -2.4  -4.15044   GGGGGGCGGAACAAA          CCGATCATGAG CCC CCC-TCATCGG          CCTTGGCCAGCTTGA  58 6
C2U40_RS11595 NONE
C2U40_RS11590 2534168 .. 2534185 - -12.7  -5.28176   GCGAGCCACAAAAAA             GAGCGCC ATCA GGCGCTC              TTTTTTTATCTACAC 100 48
C2U40_RS11580 2532066 .. 2532077 -  -2.2  -2.62038   CTCAAAATCATGAAT                CGTC ATTT AACG                 CAGCCTCATTTTCCG  38 130
C2U40_RS11575 2531763 .. 2531780 -  -4.9  -4.46854   TCAGGGAAGAATAAA             CTCAAAC TTCT GTTTGAA              CTGTGTAACCGATCA  70 38
C2U40_RS11570 2529972 .. 2530002 - -24.2  -3.53012   TGCCGTTGCCTGAAA       CAACAAGGGGAGCC AGT GGCTCCCCTTGTTG       TTTCGTGGTGGTCAG 100 54
C2U40_RS11550 2525935 .. 2525958 - -15.4  -3.06696   GCCTTTCGCAATACA          TTCAGGCTCC CGTG GGAGCCTGAA           TCATGATGGCCAGCC  95 44
C2U40_RS11520 NONE
        araG 2516762 .. 2516778 -    -5  -3.29471   CGGTCAGCAGATCAA              CGGGCC GGCAT GGCCAG              ATTGAGCGCCTTGAC  51 5
        araH 2515663 .. 2515696 - -15.3  -2.75997   GCGCCATAAAGTAAC     CCTCTGCAGGCCCGCA GCA CGCGGGCCTGCAT-GG     TTGGACAGGGATCAG  95 37
C2U40_RS11505 2514566 .. 2514596 -    -3   -4.4767   GGAGTGATGACAAAA       GCAGCGGCCCCCAG CCC CAGGCAGCCACCCC       GTCATGGGGTGGACG  65 81
C2U40_RS11495 2512630 .. 2512653 - -16.8  -4.84359   GCAGCCTCATAAAAA          CAAGGCCCTC ATGG GAGGGCCTTG           TCCATTTATCACTCC 100 34
C2U40_RS11480 2511700 .. 2511714 - -11.4  -4.52857   AGGCGCTAGATAAAA               TCCCGG CCA CCGGGA               TCAGGAGGCAACACT 100 26
C2U40_RS11450 2504129 .. 2504148 -   -15  -5.29445   GCGCAACAACAAAAA            GGGCTCCC CGAC GGGAGCCC             TTTTTGTTCGCTCAA 100 53
C2U40_RS11440 2500732 .. 2500747 - -11.8  -4.88407   TCACCCAATGAAAAA              GGCGCC TTGC GGCGCC               TTTTTTTCGACTCAT 100 51
C2U40_RS11420 2497582 .. 2497595 -  -2.4  -2.58579   CGAAGGTTGCAGAAT               TGGT TACCAT ACCA                GTACCCCCGCCAATA  38 15
        sdhD NONE
C2U40_RS11410 NONE
        sdhB 2494675 .. 2494704 - -12.3  -3.55444   CTTGTAGGGTTTAAA       TAGCCATCCAGCCA TGG TGAC-GGATGGCTA       TCCAGAGGTCGGGCC  86 67
C2U40_RS11400 NONE
C2U40_RS11395 2490374 .. 2490390 - -10.1  -3.53761   CAATCCCCTGTGAAA              GAGGCCA AGG TGGCCCC              TCGTTATCTTTCTAA  74 168
C2U40_RS11390 NONE
C2U40_RS11385 2488211 .. 2488250 -   -16  -5.05577   AAATCAAATGAAAAA  CAACATAAAAAAGCCGCCC ATC GGGCGGCTTTTTTAT-TAG  AGATAACGGGCTGAA 100 46
C2U40_RS11380 2486667 .. 2486706 - -19.4  -3.53717   GAAAAAGCCAAAAAG  CCGAAGGGGCAGGAGAGT GATG ACTCCCCTACCCCTTCGC   GGTTGGTACGGCTCG 100 68
        phnW NONE
C2U40_RS11345 NONE
C2U40_RS11340 2476486 .. 2476503 - -14.1  -5.06414   CTCGGTGAACAAAAA             CCGGCGC CAAG GCGCCGG              TTTTTTTATGCCTGA 100 110
         asd 2469209 .. 2469228 -   -15   -5.4477   AAAGGCGCAAAAAAA            CAGGGGGC CGCG GCCCCCTG             TTCATGCTGGGTGCA 100 47
C2U40_RS11310 2465793 .. 2465821 - -26.1  -5.44119   TTGAGCGCAAAAAAA        CAGCCCGCCCCCT GCC AGGGGGCGGGCTG        TTTTGCTTGCGGCCG 100 64
C2U40_RS11290 2461268 .. 2461287 -   -15  -2.91582   CATTGCATCGACAGA            GGGCAGCC CGCG GGCTGCCC             TCTTTTTTGATCCGG  90 72
C2U40_RS11280 2459221 .. 2459237 -  -5.1  -3.75332   ATCCGGCAACCTAAA              CTGCG GCAGCAA CGCAG              GCGATGTCGAATGGA  61 117
C2U40_RS11275 2456904 .. 2456924 -   -14  -2.87564   GCATGGGGTGAGAGA            GTCCCGGG TGCGG CCCGGGAC            GCAGGGTCAGAATAC  86 32
C2U40_RS11270 2456045 .. 2456060 - -11.8  -4.73388   AAGGCGCAGTAAAAA              GCCGCC TTGG GGCGGC               TTGTCATCACGCAGG 100 51
C2U40_RS11260 2452502 .. 2452525 - -16.8  -5.63504   AAGCGCACAAAAAAA          GAGGGAAGGC TTGC GCCTTCCCTC           GTTCGTTATGCCCGT 100 67
C2U40_RS11250 2449924 .. 2449939 - -11.8  -5.18726   CGCTGACAACAAAAA              GGCCCC GCAA GGGGCC               TTTTTTATGGACTGG 100 30
C2U40_RS11240 2447032 .. 2447054 - -17.8  -3.59979   CCGTTTCATCCCAAA           GAGGGAGTGC CTG GCACTCCCTC           TTTTTTTGACCCCAG 100 79
        tnaA 2441969 .. 2441992 - -15.3  -5.00884   ATCCTCGTCAAAAAA          GCCCCCGCA TCCAGG TGCGGGGGC           TTTTGTTGTTGAGCC 100 83
C2U40_RS11150 2425093 .. 2425122 - -16.5  -4.43877   CAATCCCCAAATAAA       GTGCGGCCTGAAC CGGG GTTCAGGCCGCAT        CTTGTGAGGGACATC 100 58
C2U40_RS11145 NONE
C2U40_RS11140 NONE
C2U40_RS11135 2421513 .. 2421530 - -12.7   -4.2828   TCCCACGCAGCAAAA             GAGCGCC GAAA GGCGCTC              TTTTTATTGGCAAGA  95 61
C2U40_RS11105 2414106 .. 2414126 -  -4.5  -3.42621   AATTTTAATGCACAA            GCCGCCTCC CGC GGTGACGCC            TCCCTTTTGATTCCT  53 102
C2U40_RS11095 NONE
C2U40_RS11090 2411415 .. 2411433 -  -6.6  -3.33711   TACCCATAAAGTGAA             CGGCGTGG AGT CTACGCCA             ATGCATTGAGCGCCA  59 142
C2U40_RS11085 2410674 .. 2410696 - -17.8  -5.67967   AGCAGTACAAAAAAA           GAAGGGAGCC ACT GGCTCCCTTC           TTTTTTATGTCATTT 100 68
C2U40_RS11070 2407379 .. 2407394 - -11.8  -5.67063   TCCACCATAAAAAAA              CGCGCC ATTT GGCGCG               TTTTTCTTGCATCAG 100 48
C2U40_RS11045 2398481 .. 2398498 - -12.7  -5.60689   CCAGACAATAAAAAA             CGCCCTC GAAT GAGGGCG              TTTTCTGTGCGGTGA 100 52
C2U40_RS11025 2392729 .. 2392752 - -16.8  -3.63922   ACGCTGGCCAAAAGA          GAAGGCGACC CTGG GGTCGCCTTC           GTTCTGTCTGTTATG 100 153
C2U40_RS11015 NONE
C2U40_RS11010 2391379 .. 2391397 -    -4  -3.21218   ACCTGCCATTATGAA             TCTTTAAT TTC ATTAAAAA             TCATAAAGTTAATAT  47 0
C2U40_RS11005 2388673 .. 2388689 - -15.1  -5.80951   ACCCAAAATAAAAAA              CCCCCGC ATG GCGGGGG              TTTGCTGGTTTACCG 100 46
C2U40_RS10990 2383438 .. 2383457 -   -15  -3.22448   GGAAACTCAATGCAA            TCGCCCCC GGCT GGGGGCGA             TACGAGGGGGTCATG  95 85
C2U40_RS10985 NONE
C2U40_RS10980 NONE
C2U40_RS10975 2379718 .. 2379740 - -17.8  -5.14563   CCTCTCATCAAAAAA           GAGGGAACCG CAC CGGTTCCCTC           TTTATTCCATCTTAC 100 63
C2U40_RS10970 2379115 .. 2379130 - -11.8  -3.61517   ACCTCGCTTGAATAA              GGGCGC CGAC GCGCCC               TTTGGTATTCAGCTG  85 34
C2U40_RS10945 NONE
C2U40_RS10940 2374293 .. 2374322 -  -9.2   -2.7263   ACCAGCCGGCCAAAG       GCTGGATCGGGC TGGTCG GCCCGATCCGGT        TTATCAGGGGCGAGC  63 29
C2U40_RS10935 NONE
C2U40_RS10930 2372856 .. 2372906 - -11.9  -2.84801   GATGGGGAAAGATGA TCAGGGGGCCAAG-CAGAGCGTGGA TCA TCCGCGCCCAGACTTGGCCAC-TGA CGGGAAGATCAGGCC  75 34
C2U40_RS10900 2368022 .. 2368064 - -14.9  -3.09505   ATAGCGGATGCAATA CGCAGCCGGCCTTCCCCCGC CAGC ACGGGGGAAGGCCAGGT-CA TCAGCGAGTCTTGAC  93 26
C2U40_RS10895 NONE
C2U40_RS10890 NONE
C2U40_RS10885 2366562 .. 2366589 - -13.6  -3.89346   TGCTCACGTCATAAA        CAAAAAACCGCC CGAG GGCGGTTTTTTA         CTGGGCCGGTGTCAC 100 37
C2U40_RS10870 NONE
C2U40_RS10865 2363537 .. 2363576 - -14.4  -3.30006   AGCAAGGGAGATCAA  GCC-TTGTCAGCCGATGGG AGC CCCATCCGCCGACAACGAC  CATAAAAATTCCCGC 100 68
C2U40_RS10860 2362374 .. 2362393 -   -15  -3.02013   ACCGCAACAACGACA            GAGGGGCC CGCG GGCCCCTC             TTCATCATTCCGCTC  93 61
C2U40_RS10850 2360817 .. 2360832 -  -3.2  -3.22951   CATAGCCTCACAACA              TTGACG GGGC CGGCAA               GGGCCCGCACGGCGC  45 202
C2U40_RS10845 2359944 .. 2359984 -   -30  -3.31144   GGCTGAGCGCCACAA  CACTAAGGGGGCCCGATC TTGCG GATCGGGCCCCCTTAGTG  TTGACAGCCGTGACT 100 62
C2U40_RS10830 2357022 .. 2357036 -  -7.1  -3.34895   TGCAGGTTGAAGGAA               CGAGG CTCCC CCTCG               TTGCCAACCAATCTG  59 45
C2U40_RS10825 2354976 .. 2354989 -  -9.5  -2.63435   GCAAGGATTCAGAAC               GCGCC GATG GGCGC                CGGATGAAGGGGCCG  62 193
C2U40_RS10820 2354182 .. 2354207 - -21.9  -4.72272   TGCGGCCAGCAAAAA         GCCCACCCCGG GCAA CCGGGGTGGGC          TTTTTCATGACGCCA 100 46
C2U40_RS10810 2351791 .. 2351801 -  -5.4  -2.96695   TTGTTTATCAAACCA                 TTGC AAG GCAA                 TCCTGATACAAGAAC  49 46
C2U40_RS10805 2351586 .. 2351597 -  -3.6  -3.10245   CCACCGCAAGAGACA                GAGC AGTT GCCC                 CTTGCTGTCTTCGTC  46 81
C2U40_RS10800 2351413 .. 2351424 -  -3.6  -3.16203   CCACCACAAGAGACA                GAGC AGTT GCCC                 CTTGCTGTCTTCGTC  47 81
C2U40_RS10795 2351240 .. 2351251 -  -3.6  -3.16203   CCACCACAAGAGACA                GAGC AGAT GCCC                 CTTGCTGTCTTCGTC  47 81
C2U40_RS10790 2351067 .. 2351078 -  -3.6  -3.16203   CCACCACAAGAGACA                GAGC AGTT GCCC                 CTTGCTGTCTTCGCC  47 81
C2U40_RS10785 2350894 .. 2350905 -  -3.6  -3.16203   CCACCACAAGAGACA                GAGC AGAT GCCC                 CTTGCTGTCTTCGTC  47 81
C2U40_RS10780 2350721 .. 2350732 -  -3.6  -3.16203   CCACCACAAGAGACA                GAGC AGTT GCCC                 CTTGCTGTCTTCGCC  47 81
C2U40_RS10775 2350558 .. 2350572 -  -3.5  -5.07011   GACACAAAGCAAAAA              GACCGC GAAG GCGG-C               TGGATGAAAAACGGT  79 68
C2U40_RS10770 NONE
C2U40_RS10765 2348193 .. 2348216 - -16.8  -4.04206   GCAGCCGGATACAAA          CAAGGCAGCC CGCG GGCTGCCTTG           TTTTTTTCACCCCTT 100 65
C2U40_RS10740 2341890 .. 2341902 -  -3.3   -5.1861   GGTAGCATCAAAAAA                GGTGG CCT CAACC                GGTGGTTTTTTGCGC  82 20
C2U40_RS10735 NONE
C2U40_RS10730 NONE
C2U40_RS10725 2335276 .. 2335304 - -16.1  -3.56643   GCCACAGTTTCCAAA        CAAAACGGGAGGC CAA GCCTCCCGTTTTC        ATACCTTATCCGTCA 100 48
C2U40_RS10720 2334753 .. 2334765 -  -6.9   -2.8507   CCACTGAAGGAATCA                GCGCC TAG AGCGC                CTCTATCTTCACCTT  54 17
C2U40_RS10715 2334275 .. 2334297 -  -9.8  -4.32034   GGAGCATGAGTAAAA           GCCGGGCC AGCCGTG GGCCCGAC           TAATTTAGGCGTGGC  90 30
C2U40_RS10710 2333089 .. 2333106 -  -6.3  -4.01137   GAGATAATCGATAAA             CACCTTGC CCT GCA-GGTG             ATCGATCTCATGCTG  68 461
C2U40_RS10700 2332437 .. 2332453 -  -7.3  -3.37487   GCACATTGGCAAACA              GGCAAAT TAG ATCTGCC              GTCAGCAAGCTGCAA  59 27
C2U40_RS10695 2331850 .. 2331873 -  -2.3  -3.34398   TTTCCCGTTCAAATA          CGGCTACTG ATCACG CAGGATCCG           GCAACCAATATTCAT  45 12
C2U40_RS10690 NONE
C2U40_RS10685 2330423 .. 2330441 - -13.1  -4.70169   TTACAGCTAACAAAA             GCGCGGC TCTTG GCCGCGC             GTTGAACGTTCCGGG 100 55
C2U40_RS10675 2329081 .. 2329094 -  -9.5   -5.4387   ACATAAAGTAAAAAA               CCGCC AGCC GGCGG                TTTTTTCATTGTCTG 100 45
C2U40_RS10665 2327459 .. 2327472 -  -9.5  -5.67063   GGCAGCATAAAAAAA               CCGCC TGAT GGCGG                TTTTTTTATGGCGAC 100 42
C2U40_RS10650 2324950 .. 2324966 -  -9.4  -4.73912   AGAAAAATGAGAAAA              GAGCGG TCACG CCGCTC              TTTCAACGACACGAT  95 114
C2U40_RS10645 2323214 .. 2323232 - -14.6  -4.93696   GCCAAATATCAAAAA             GGGGGACA ATA TGTCCCCC             GACTTGACAAGAGAG 100 83
C2U40_RS10640 2322441 .. 2322468 -  -6.8  -4.46212   GCCCTCATCACAAAA        CCGGCTGCGGGA TGGC TCACGAGGCCGG         TAGCCAACGCTCCTG  77 14
C2U40_RS10635 NONE
C2U40_RS10630 2321225 .. 2321259 - -12.9  -3.25316   CTGACAGACAATACA    CGCCAGGCCTG-AGAA ACCA CTCAGCAGGCCTGGCG     CTTCCGGCTCAATTC  85 39
C2U40_RS10620 2319240 .. 2319259 - -10.7   -5.9873   GCAGCATAAAAAAAA            CCACCGC GACCTG GCGGTGG             TTTTTTTATGGGCGC 100 52
C2U40_RS10610 NONE
C2U40_RS10605 2316489 .. 2316506 - -12.7  -4.76644   AATACCCATGAAAAA             GGCGACC CGGA GGTCGCC              TTTTGACTGTGTCTG 100 81
C2U40_RS10595 2313855 .. 2313885 - -18.4  -2.87564   CGATTCCCGGATATA       GAAAAGCCCCGCCA GAT TGGCGGGGCTTTTT       ACATCAACCGAGCGA 100 62
C2U40_RS10570 NONE
        pfkB NONE
C2U40_RS10560 2305811 .. 2305826 - -11.8   -5.4505   TTGGGCAATAAAAAA              GCGGCC AAAA GGCCGC               TCTCTTGTATGGCGT 100 57
C2U40_RS10555 2304976 .. 2305008 -    -9  -4.09243   GAGATCGGCCGAAAA      GCCGGCGAACTGCT GCTCG AGCGGATGGCCGGC      AACGACGAACCCGCC  76 94
C2U40_RS10545 NONE
C2U40_RS10540 NONE
C2U40_RS10535 NONE
C2U40_RS10530 NONE
C2U40_RS10525 2299439 .. 2299457 - -14.6  -4.85599   TCCAGCCCATAAAAA             GGGAGAGC CCT GCTCTCCC             CTGTCTGTGTTCACC 100 57
C2U40_RS10520 2298028 .. 2298057 -  -2.8  -4.15884   CGAAGTAAACAACAA       GGGCTACTGCAAG GGGTG CCTGC-GCAGCCG       CGAGGAGCGTTTCAA  61 207
C2U40_RS10510 2296574 .. 2296595 - -17.3  -5.33405   GTCAGCAAACAAAAA           GCCGCCGGA TTGC TCCGGCGGC            TTTTTTACATCCATC 100 91
C2U40_RS10480 2287782 .. 2287801 -   -15  -4.43477   GCGAGCCAATGAAAA            GAGCGGCC ATGT GGCCGCTC             TTTGGTATCGGGTAA 100 51
C2U40_RS10470 2285293 .. 2285303 -  -2.4  -2.87132   GTGTTTCCTTATACA                 GTGG TGC CCCC                 TACCAAAGGGCACAT  41 233
C2U40_RS10465 NONE
C2U40_RS10460 2282755 .. 2282776 - -14.5  -2.55074   CGCAAGGCGAACCGA           CTCATGGGG CCAG CCCCATGAG            TCAATTTCTTGTGGG  90 43
C2U40_RS10455 NONE
C2U40_RS10450 2282097 .. 2282112 - -10.4  -5.62045   ACAGACAACAAAAAA              GGAGGC CTGA GCCTCC               TTTTAGCATTTATAA 100 51
C2U40_RS10445 NONE
C2U40_RS10440 2278442 .. 2278452 -  -3.2    -3.322   AGCGCCATAGATCAA                 TCCC TCA AGGA                 TGCATTCAACTCTTC  47 11
        ihfA 2278109 .. 2278136 - -12.8  -5.14563   TTTCTCATGAAAAAA        TAAAAGCCAGGC GGCT GCCTGGCTTTTT         GTCACTCGTTGGGCT 100 27
C2U40_RS10430 NONE
C2U40_RS10425 NONE
C2U40_RS10420 NONE
C2U40_RS10415 2271412 .. 2271426 -  -3.4  -3.22475   TCCAGTCGCACAATA               GCTCAG GGA CCGCGC               ATCTCCATCCAGTTG  45 13
C2U40_RS10410 2270852 .. 2270864 -  -3.4  -3.16191   GGATAGCCCCATCAA                TCGA CGATC TCGA                TGCGGGTCACCTGCC  45 9
C2U40_RS10405 2269131 .. 2269160 - -12.1  -4.64676   TCACCTGCAATAAAA       GCGCAAGGCGACC CTGG GGTCGCCTTGCTG        TGTTTTGTCTCTGGC 100 64
C2U40_RS10365 NONE
C2U40_RS10360 2260602 .. 2260618 - -13.7  -5.28176   CTCAGCCACAAAAAA              GGAGCGC CTG GCGCTCC              TTTTTCATTTTTATG 100 72
C2U40_RS10300 2249551 .. 2249576 -    -4  -3.29511   TTCACTCCCTGACAA         TCAGTGCAAGG TAACG CCCCGC-CTGA         AAAATTCAAATCAAT  49 83
C2U40_RS10295 2248988 .. 2249007 -    -7  -4.03234   TGGCTTTCATATAAA            CGCGCGGG CACA CCCGAGCA             CAACAAAGGCCCCAT  70 83
C2U40_RS10290 NONE
C2U40_RS10285 2246257 .. 2246274 - -12.7  -4.68908   TTCAGGCAAAAGAAA             GGGCGAC CTCA GTCGCCC              TTGTTGATTAATTGA 100 52
C2U40_RS10280 2243510 .. 2243533 - -14.6  -3.53091   ACCCGGGTGTTGAAA          GGGTGGGAGA TGGC TCCCCCACCC           CGTCGGGTTTACTGC 100 34
C2U40_RS10275 2243011 .. 2243029 -  -9.6  -3.01684   AACCACCGACACAGA             GACATCCA CCC TGGATGCC             CACCGGTACAGAGTT  66 244
C2U40_RS10270 2238052 .. 2238072 - -15.4  -5.40072   TGCTCCTTAAAAAAA            GCCCCGGC AACTG GCCGGGGC            TTTGGGTGTGATACC 100 63
C2U40_RS10265 2236955 .. 2236967 -  -4.8  -3.64703   GTGCCCTTACTGAAA                GTCG TTACT CGAC                TTTATTCCATGTCGA  55 81
C2U40_RS10260 2235888 .. 2235901 -  -2.3  -4.09628   CAGTTCAAACAATAA               CCTAG TTTG CTCGG                GCATCTCTCATTGGC  56 523
C2U40_RS10255 NONE
C2U40_RS10250 2233269 .. 2233294 -  -6.1  -5.26875   TTGCTAATGAAAAAA         CGGGTGGCAGAC TGG ATCTCCC-CCCG         TTTCATCGTCAAATC  93 47
C2U40_RS10245 NONE
C2U40_RS10240 2229542 .. 2229564 -  -9.9   -5.7946   CGTGGAACAAAAAAA           GCGACCAAT TTTTC ATCGGTCGC           TTTCATCTTTACCCC 100 134
C2U40_RS10235 2229285 .. 2229301 - -13.7   -3.8579   ACTGAACAACGTAAA              GGGGCCA TCA TGGCCCC              TTTCCTTTTGCAATG 100 57
C2U40_RS10210 2223461 .. 2223492 - -15.3   -4.7497   CTGAGGTAGCAAAAA      CGAAAAGGGCCTG CGCAAT CAGGCCCTTTTCA       TTTGCGGCTGCGGGC 100 12
C2U40_RS10200 2220566 .. 2220591 - -12.6  -4.18018   CCTTCTCATGCAAAA         CCGGCCCA-GC AGAGG GCATGGGCCGG         TGGATCATTACGCAA  95 63
C2U40_RS10195 NONE
C2U40_RS10190 2218696 .. 2218711 -    -4  -3.37257   ACACAATCAAATACA              CGATGCT GTC AGC-TCG              CCGTGGTGGCGGGCT  49 18
C2U40_RS10185 2217816 .. 2217839 - -16.8  -3.81755   AGGTTTGAAAGACAA          GAGGCCAACC CGGG GGTTGGCCTC           TTTCATTGCGGCAAT 100 47
C2U40_RS10170 2214685 .. 2214702 - -14.1  -5.38054   TGCCATAAACAAAAA             GCGGGCC ACTC GGCCCGC              TTTGTCATGTCTGCC 100 57
C2U40_RS10150 NONE
C2U40_RS10145 NONE
C2U40_RS10140 2207002 .. 2207026 - -20.1  -4.56597   CGCGGCGGGTAAAAA          CAAGCCCGGCA CAG TGCCGGGCTTG          AGTGAGCGTGGGTGA 100 50
C2U40_RS10135 2205329 .. 2205355 - -11.6  -5.57054   AAGAACCTAAAAAAA         GCCAGGTACGAA TTC CTTGTACCTGGC         ATAGGGGAATTGGCT 100 164
C2U40_RS10130 2203730 .. 2203744 -  -5.6  -3.66288   CAGTGCGCAAGACAA               CGCCGA GCG CCAGCG               CCAGCACGTGAAACG  57 301
C2U40_RS10035 2187803 .. 2187834 - -18.2  -3.79747   TGACTGATGAGTAAA      CGAAAAACGGGAGC CTTG GCTCCCGTTTTTCA       TGGCCGGCATGCCGC 100 46
C2U40_RS10020 2182600 .. 2182620 - -15.5  -6.02914   CGCACATAAAAAAAA            GAGCCACAC AAT GTGTGGCTC            TTTTTGTCAGACTAG 100 48
C2U40_RS10015 2180559 .. 2180573 -  -8.5  -3.88559   AAGCATGTTGAGAAA               GGGCC CTTGC GGCCC               TTTTTTCAGGTTCAT  74 37
        metG 2173907 .. 2173925 -   -16   -5.2853   GAGGGAAAAATAAAA             GGGAGGCC GCA GGCCTCCC             TTGATTGCTTGATGA 100 52
C2U40_RS09985 2173065 .. 2173085 -   -14  -4.76644   AACAGCCATGAAAAA            CGGGAGCC ACACA GGCTCCCG            TTTGCATCGATGGCA 100 49
C2U40_RS09975 2171155 .. 2171177 -   -12  -5.03713   AAGAACCAAAGAAAA           GGGGCCACAT TCT ATGTGGCCCG           CTGGCAAAACTCAAA 100 89
C2U40_RS09970 NONE
C2U40_RS09965 2168526 .. 2168544 -  -8.8  -5.60993   GGCCGCATAAAAAAA             GCCCGC TTTGATC GCGGGC             TTTTTGATGGCTTGC 100 103
C2U40_RS09955 2165983 .. 2166014 -  -7.2  -3.31792   CCATGACGCTGACAA      GGCTCTCCCCCG CATAGCCC CGAAGGCGAGCC       GTGCTGCCATCGGGG  59 60
C2U40_RS09950 NONE
C2U40_RS09945 NONE
C2U40_RS09940 2162457 .. 2162486 -  -6.3  -3.64487   TCATATCCTCAAGAA       GCCCGGCCCTCTC ACCG AAGAGGAGTGGGC        CATCATGCGCACCCA  59 391
C2U40_RS09900 2148601 .. 2148630 - -20.9  -2.66435   AGCGTGACCAGATGA       CACCGCGGATACA GAGA TGTATCCGCGGTG        TTTTTTTATCCGGTT 100 121
C2U40_RS09875 NONE
C2U40_RS09870 2142745 .. 2142764 - -12.2  -2.78816   CCAGCCCGCAGGAGA            GGATGCAC GGAC GTGCATCC             CTCAGAGTTCGTGGG  77 27
C2U40_RS09865 2141885 .. 2141899 -    -7  -5.84432   CACAAGATAAAAAAA               GGGGCC ATC GGCCCT               TTTTTTGTCGGCGTT 100 39
C2U40_RS09820 NONE
        hisD NONE
C2U40_RS09810 NONE
C2U40_RS09805 2129455 .. 2129468 -  -3.8  -2.67143   ATATCCATCACAGCA               CTCC CTTGCT GGAG                GGAAGCTCGCTCCCT  43 4
        hisH NONE
        hisA 2127983 .. 2128017 - -17.8  -3.14564   TTACCCCTTGATGAA     GAGGCTTCCGGCCGGA CGG CCCGGCAGGGAGCCTC     TCTCTCAATCGACGT 100 65
C2U40_RS09790 NONE
C2U40_RS09785 NONE
C2U40_RS09780 2120614 .. 2120624 -  -4.6  -4.35085   AGCGGGAAAAAAAGA                 CCCG AAA CGGA                 CGGCGTCTTCACTCG  67 70
        hisF NONE
C2U40_RS09770 2119043 .. 2119068 - -17.7  -4.13014   GCGACAGCCGTAAAA         CAAAACGGGCC TGAT GGCCCGTTTTG          TCGATATGAGTTCAA 100 44
C2U40_RS09760 2115207 .. 2115230 -   -16  -2.59431   GCCCTGGATAAGGCA          TGACCCCCGC CGGG GCGGGGGCCA           TGTGCGCTAGATCAG 100 32
C2U40_RS09750 2113835 .. 2113850 - -11.8   -4.4261   TTCTCAATATGAAAA              GGGGCC TGCG GGCCCC               TTTCTGTTGTTGGTC  95 113
C2U40_RS09675 2088410 .. 2088439 -  -2.9  -4.07568   TTTGTGCGGCTAAAA       GGGATAACCGA TGGTAAAG TAAGTTATCCC        TGTCGAGATACTGAA  58 46
C2U40_RS09665 2087625 .. 2087663 -  -8.1  -2.57211   ATTGCGGTGGACAAG  GTCATGG-GCGTGCCGTCA CCG CGTCGGCGCGCGCCA-GAC  GAAGCGGCCATCGCC  56 2
C2U40_RS09660 NONE
C2U40_RS09655 2086263 .. 2086281 -    -8  -3.56643   CGCACATCGCGCAAA             CGCGCGGA AAT CCCTCGCG             AAATGGCGAATGCGC  66 225
C2U40_RS09650 NONE
C2U40_RS09645 NONE
C2U40_RS09640 2082000 .. 2082012 - -10.5  -3.79565   ACAAATACAGGGAAA                CGGCG GAA CGCCG                GAATACTTGAAGTGG  84 53
        trbB NONE
C2U40_RS09630 2080563 .. 2080573 -  -4.6  -2.78384   CCGTTGGCCATCAGA                 CGAG CGC CCCG                 CCGCCGAACGAGAAG  46 10
C2U40_RS09625 2080282 .. 2080296 -  -4.9  -3.53012   GCGTCGCTCCTCAAA               CCGAC AGGTG GCCGG               GGATGCGCAGATGTT  53 6
C2U40_RS09620 NONE
        trbJ NONE
C2U40_RS09610 NONE
        trbL NONE
C2U40_RS09600 NONE
        trbG NONE
C2U40_RS09590 NONE
C2U40_RS09585 2071878 .. 2071900 -  -9.8  -3.67597   CTCTCGATCCAACAA           GTCAGCCGAG AAA CCCTGCTGAC           GATGGTCGAACAGGG  70 212
C2U40_RS09575 NONE
C2U40_RS09570 2068956 .. 2068974 -  -6.6  -2.71712   CGGCGGCGTGCAAAT             CCTGCAGA ACC TCCGCGGG             GCATGGATGCTCCGT  53 469
C2U40_RS09555 2067959 .. 2067996 -  -3.5  -2.57132   GTCGCGCCCGAGAAT  CACTCCGCGTCAGCGCTG TCATC CAG-GCCG-CGCAG-GTG  CAGATCAGCGAGACC  43 30
C2U40_RS09550 2066873 .. 2066889 -  -7.9  -4.11216   GCTCTACCGGGAAAA              CGCGTGT GGG ACGCGCG              CTGCGCTCCTGCCGG  74 326
C2U40_RS09530 2062787 .. 2062799 -  -7.7  -3.09015   CCCAGATTTATCCAA                TACGC TGC GCGTA                TAGTTTCCATAGCGC  59 62
        msrB NONE
        msrA 2061693 .. 2061718 -  -6.8  -3.14132   TCGGCGCGGCACTAA         CGGCAGCGAA GCCTAT TCCGCTGCAG          CCCCGGCCGCAGGGC  57 12
C2U40_RS09515 NONE
C2U40_RS09510 NONE
C2U40_RS09505 NONE
C2U40_RS09500 NONE
C2U40_RS09495 2058139 .. 2058180 -  -4.9  -3.37354   GATATGCATGGAGAA GCGGGCGCAG-GGCGTGC GGGATTA GCGCGGCACGGCGCCTGC ACGAACCGCGGGGTC  51 39
C2U40_RS09460 NONE
C2U40_RS09455 2051938 .. 2051952 -  -5.6  -2.73364   GCGGGACGCGAAGTA               GCTTGC GCC GCTAGC               CGCCGTAGCGCTCGG  48 21
C2U40_RS09450 2050354 .. 2050376 -  -6.9  -4.11692   CATCGAGCTCGAAAA           GCTCGTCGG AGCCA CCGACATGC           GTGCCGTTGATGAAG  70 263
C2U40_RS09440 2049797 .. 2049822 -  -7.5  -3.50393   CTTGATTCGACAGAA         GC-CCAAGGGTC CGA GGCCCTCGGCGC         CAGTCCGCGGAGAAG  64 141
C2U40_RS09435 2049395 .. 2049405 -  -2.4  -3.26471   TCATTGCCAGACGAA                 GTCC AAT GGCC                 GGTGGCTATAGTTTC  43 121
C2U40_RS09430 NONE
C2U40_RS09425 2048097 .. 2048116 -  -4.8  -3.27022   TGTAGTTGAGAGCAA            CCCAGGCG TATC CGACAGGG             TTGCGGCGGACATGG  49 132
C2U40_RS09405 2045091 .. 2045106 -  -6.1  -3.65902   CCGATGGCACGCAAA              CGCTG AAGCGG CAGCG               CGACGCGGTGTTCGC  60 92
C2U40_RS09385 2042795 .. 2042807 -  -4.8   -4.1899   CGACTGGATCGAAAA                GTGC CTGGC GCAC                GAGGACGGGCGTTCG  64 165
C2U40_RS09370 2040356 .. 2040366 -  -8.2  -3.32832   CCCAAAAATATTCAA                 GCCG GCC CGGC                 GCTACGGCTTCTTGC  65 27
C2U40_RS09365 NONE
C2U40_RS09360 2037767 .. 2037782 -  -4.6  -2.53012   AACGGCACGACGAAG              GTCAGC TCCA GCAGAC               TCAGGCATTCCCCCT  44 39
C2U40_RS09355 2034514 .. 2034526 -  -5.5  -4.07568   GCTTGCCCTGGAAAA                CTGCC GCC GGCAA                TACCCAGGGCTCAAT  65 160
        yqeC NONE
C2U40_RS09330 2028960 .. 2028982 - -20.6  -5.14985   GCAAAGAGATAAAAA           GGGCCCGCCA TCA TGGCGGGCCC           TTTTTGCTTCTGTGC 100 45
C2U40_RS09285 2016302 .. 2016325 - -11.8  -2.57468   CGTCACGAGATCAAT          CTGCCAGAGCG CCG CGCTCTGG-AG          TTGTCAGAAGGGGAT  65 293
C2U40_RS09275 2014793 .. 2014825 - -13.5  -5.45802   GGGGGAAAATAAAAA      TACCCAAGCGGCCAG ATA CTGACGACTTGGGTA      TCGCGCCCACCCCTA 100 254
C2U40_RS09245 NONE
C2U40_RS09240 NONE
C2U40_RS09235 NONE
C2U40_RS09230 NONE
C2U40_RS09225 2003807 .. 2003817 -  -4.6  -3.03124   GGTCAGGGGCGAAGA                 GGCG GCT CACC                 AAGGATCCTCTCCCT  48 21
C2U40_RS09220 2002288 .. 2002311 - -12.4  -3.35813   CCTTATTTGAATGAA          GGCCGGGATC AACC GATCCTGGCC           AGTTGCCTGAGGCCA  83 10
C2U40_RS09215 NONE
C2U40_RS09210 2000862 .. 2000889 - -12.8  -4.17516   GGGAAAGGAGATAAA        CGGGCAG-CCAAC CTG ATTGGTCTGCCCG        TTGGCTTGACCCGGT  95 72
C2U40_RS09205 1999191 .. 1999208 - -12.7   -5.7946   TTTGGAATAAAAAAA             GAGCGCC CGCA GGCGCTC              TGGTCAATTCGCTGA 100 44
C2U40_RS09200 NONE
C2U40_RS09195 1995900 .. 1995912 -  -5.5  -3.14132   GCCGGCCTTCAGCAA                GACGG GCA CCATC                ACGGCGGCCAATGCC  51 478
C2U40_RS09185 1994646 .. 1994661 - -11.8  -3.81414   AGCTGCAATGAACAA              GGGGCC CGCG GGCCCC               TTTCTTTATCTTTGT  88 52
C2U40_RS09175 1992777 .. 1992804 -  -9.8   -5.0133   GATTGCGCCAAAAAA        GAAGGAGCGGCC CGGG GGCGGCTCCTTT         GTGCGTGTTCAGGCA 100 56
C2U40_RS09170 1991199 .. 1991217 - -13.2  -4.82901   GTTTGCCCATAAAAA             TACCCGAC AAT GTCGGGTA             TTTAGGAACCAAATG 100 58
C2U40_RS09160 1989546 .. 1989594 -   -17  -3.76373   GGCGGAATATCCAAA CGACAGGCAATAAAAACGGCGGG AATT CCCGCCGTTTTTATTGT-TGCCA CGCCGACTTATTCGC 100 33
        minC NONE
        minD NONE
C2U40_RS09135 1986212 .. 1986234 - -17.8   -5.4505   CGTGGCAATAAAAAA           CCGGATCCTG GCA CAGGATCCGG           TCTTCATTGGGGGAA 100 64
C2U40_RS09130 NONE
C2U40_RS09125 1984944 .. 1984963 - -12.1  -2.78596   CATCGCGGCACCATA            GGCGGCC ATCTGG GGCCGCC             GGCAGTTAAGCCTTG  77 53
C2U40_RS09120 1984363 .. 1984389 - -15.2  -4.36914   GGGCTCTGCAGAAAA         GAGAAAGGCGCC GAG GGCGCCTTTTTC         ATGCCTGTTGCTGAC 100 24
C2U40_RS09105 1981670 .. 1981685 -  -4.6   -4.0942   CATGCACCAGAGAAA              TGTGCG GTTG CGCACG               TCATCCGCCGCAACC  62 75
C2U40_RS09100 NONE
C2U40_RS09095 1980858 .. 1980871 -  -5.9  -2.83164   GTAGCCATCACCATA               GCAGC TTTT GCCGC                CGGAGCCAGCGGCAT  51 64
C2U40_RS09090 1980501 .. 1980532 -   -13  -3.91144   GCCAGACGTCAGAAA      GCGACAACGCAGCC CTCG GGCTGCGTTGTCTG       TTTTGGGGCCTTGCG 100 60
C2U40_RS09080 1978748 .. 1978768 - -13.3  -5.41143   TAGCGGGCAAAAAAA            GAGGCACGC ATG GCGTACCTC            AGGAAACGGATTTGT 100 24
C2U40_RS09075 1977432 .. 1977449 - -11.3  -4.27316   CGCCTCAATGCAAAA             GGGGCAT TGCC ATGCCCC              TTGCGCCGGATCACG  93 79
C2U40_RS09070 1976663 .. 1976699 -  -3.8  -2.63631   GCAATGGCCAGACGA   GGATCGCCCACTCATGCA GGG TGCATG-G-GAACGATCG   GCGCCTGTTTGTTGT  43 41
C2U40_RS09065 1976190 .. 1976210 - -16.9  -4.18197   ATTTGCCATTGAAAA            GGGCCTGCA TCA TGCAGGCCC            TTGGCGATCTTGTGG 100 57
C2U40_RS09055 1975105 .. 1975138 - -16.9  -3.05343   CGGATAGCGGGAAGA     GC-CTTTGCACTCCCG AAA CGGGAATGCAAAGTGC     GGGGGGGTCATTCTA 100 85
C2U40_RS09050 1973548 .. 1973560 -  -9.1  -2.78463   ACCCGTTTCACCACA                CCAGC ACT GCTGG                CGTGGTCGGCATACT  63 137
C2U40_RS09045 NONE
C2U40_RS09040 NONE
C2U40_RS09035 1973180 .. 1973194 -  -2.8  -2.60194   AGTGCTCTAACCAAC               TGAGCT ATA AACCCA               CATCTGTGCTTGAGC  40 83
C2U40_RS09030 1973077 .. 1973087 -  -6.8  -2.75382   CAGCTGAGCTAAGGA                 CGCA GGG TGCG                 CAAGGCGACGTTATC  53 55
C2U40_RS09025 1972974 .. 1972992 -   -16  -4.70659   GGGGAGATGCAAAAA             GCCCGCTC GAG GAGCGGGC             TTTTCTAATCTGGTG 100 36
C2U40_RS09015 NONE
C2U40_RS09010 NONE
C2U40_RS09005 1967732 .. 1967749 - -12.7  -4.67353   GTAGTCAGTGAAAAA             GAGCGCC TTGT GGCGCTC              TTTTTTATTGTCGGC 100 30
C2U40_RS08980 1962198 .. 1962221 - -16.8  -4.05714   AGGCTGAATGACAAA          GAGGGAGAGC CTGG GCTCTCCCTC           TTATATTGCGGCCGA 100 85
C2U40_RS08960 1958149 .. 1958160 -  -5.8  -3.14132   GGCTTTTTGCAGCAA                CTGG CCAG CCAG                 AACCGGGTCGATGTA  51 173
C2U40_RS08950 1956111 .. 1956130 -   -10  -3.18274   GCGATCGTAATTGAA            GAGTGACC ACAT GGTCACCC             CCAGAAAGGAGACCA  70 80
C2U40_RS08945 1954139 .. 1954149 -  -3.2  -4.07568   GCTCGGGCGGCAAAA                 CGCT CTA AGCA                 AATCGAGCCGCAGTA  58 136
C2U40_RS08935 1951631 .. 1951648 -  -8.4  -3.41962   GGTGAAGAGACAAGA             GCTGGC CATAAC GCCAGC              TGGCTCATGGCTGCT  65 30
C2U40_RS08930 NONE
C2U40_RS08925 NONE
C2U40_RS08920 NONE
C2U40_RS08915 NONE
C2U40_RS08910 1943580 .. 1943615 - -11.2   -3.6284   AATCATCACTGCAAA    TGCACAACACTTAGCA GGGG CGCGGAGTGTTGTGCA     TTGTTGTTATCTCTT  81 51
C2U40_RS08855 NONE
C2U40_RS08850 NONE
C2U40_RS08845 1929631 .. 1929653 -  -5.5  -3.33261   GTTCAAGGCGCACAA           GTGCGGAGC GTGTT GATCCACAC           TCCCGTTATCTTGAC  54 83
C2U40_RS08840 NONE
C2U40_RS08835 NONE
C2U40_RS08830 1925789 .. 1925799 -  -8.2  -2.71924   CAGTGGCGTCGAAAT                 CGGC GAT GCCG                 TAGTGATAGCCGCTG  60 476
C2U40_RS08820 1922055 .. 1922071 -  -2.1  -4.05322   AAAGTTTCATACAAA              TCTGGCC GAT GGGCTGA              GCAGTGCCGTCGACA  56 458
C2U40_RS08815 1921185 .. 1921202 - -12.7  -5.06414   CGCGCCCAACAAAAA             GGCACCC CGCG GGGTGCC              TTTTTCGTGACAGCT 100 56
C2U40_RS08800 1918029 .. 1918046 - -11.3  -4.63048   GGGATAAACAAGAAA             TGGCAGC CGAG GCTGCCA              TTTTTGTTGGGGAGT 100 50
C2U40_RS08790 NONE
C2U40_RS08785 1914538 .. 1914551 -  -2.3  -3.34895   TCGACGGTGAATGAA               GGGAG GTCC CTACC                GAGCAGCAGGGCTGC  45 82
C2U40_RS08780 NONE
        actP 1912496 .. 1912513 - -14.1  -5.14563   CTTTGCATGAAAAAA             GCCGGCC CGGG GGCCGGC              TTGCAACCGTCAATC 100 47
C2U40_RS08770 1910656 .. 1910673 - -12.7  -5.64274   GCAGGCATAAAAAAA             CCGGCAC TCAG GTGCCGG              TTTTCATTGACGGGA 100 59
C2U40_RS08730 1901056 .. 1901075 - -13.6  -4.91873   GATAGCAATGAAAAA            GGGCAGAC CCTA GTCTGCCC             TTTTTTACGGCTGGC 100 51
C2U40_RS08725 1900379 .. 1900414 - -20.4  -4.82901   GTCTGCTGATAAAAA    TGAAGGGCCCGCCGGT GCAA ACCGGCGGGCCCTGCT     GTTTTGGGGGGATCT 100 48
C2U40_RS08705 NONE
C2U40_RS08700 1892932 .. 1892962 - -22.8  -4.22009   ACCAGCCAACATAAA       CAAAACGGGAGCCA CAG TGGCTCCCGTTTTG       TTTCGCTTTCCGCCT 100 39
C2U40_RS08690 1889681 .. 1889698 - -12.7  -5.28778   ACGAGTGAGAAAAAA             GACCGCC GAAA GGCGGTC              TTTTTGTCTGCGGGA 100 50
C2U40_RS08670 1884316 .. 1884335 -    -7  -2.74192   GACTCTGGAATATCA            GCCGGAGC AGCA GCGCCAGC             CGCCGTTCTCGGTGG  49 501
C2U40_RS08655 1881205 .. 1881216 -  -2.2  -2.57132   CTTGGGTGCGACAAG                GTCA TGTG CGAC                 AAATAGATACCCCAC  38 15
C2U40_RS08650 1880189 .. 1880205 - -10.8  -5.24551   CCAAAGCAACAAAAA              GGGGCG ATTTG CGCCCC              GACTCTGCTAATGCC 100 147
C2U40_RS08625 1869654 .. 1869664 -  -8.2  -4.00486   CGCAGAATATAAGAA                 GCCG GGC CGGC                 AAGCTGCGTTCCCGA  77 101
C2U40_RS08620 NONE
C2U40_RS08615 NONE
C2U40_RS08610 1867449 .. 1867466 -  -2.6  -3.31792   GCATGATGCCGACAA             GGTGCC TGTGCT GGCAAC              TGCCTGGATGGCAGC  45 86
C2U40_RS08605 1866420 .. 1866432 -  -7.7  -2.53876   CGCCATCTTAACGCA                GTTCG GGG CGAAC                GCCGAGCGGCGCTGG  56 52
C2U40_RS08600 1864956 .. 1864982 - -18.1  -4.01184   AGAGAGGATGATAAA         CAAGGGGGCAC CTGAT GTGCCCCCTTG         TTCGTTATGGCTGGT 100 30
C2U40_RS08590 1861629 .. 1861657 - -16.1  -3.65656   CTACGACACACACAA        CAAAAGCGCGACC CTG GGTCGCGCTTTTT        TATTGGCCAGAGCGG 100 54
C2U40_RS08560 1853782 .. 1853806 -  -5.5  -5.40072   GTTCGCTCAAAAAAA          CAGCGAGGTCG GAG CAGCCACGCCG          ACCTCGAAACGGGTG  91 230
        corA 1852587 .. 1852607 - -14.7  -3.33815   AGGGGCGGGAATTAA            TCGGGGGGC CAT GCCCCCCAA            TCCGCTTATCTCTTT 100 60
C2U40_RS08550 1851845 .. 1851863 - -10.2  -2.52834   CAGGGCACCATCAAC             CGGGGGCA GAG TGCCACCG             AGGTGAGCGGTGCCC  59 191
C2U40_RS08540 NONE
C2U40_RS08535 1847724 .. 1847743 -   -15  -4.57533   AATAACAGCAGAAAA            GGGAGCCC TGAT GGGCTCCC             TGCGGGGTTTACAGC 100 34
C2U40_RS08530 NONE
C2U40_RS08525 NONE
C2U40_RS08520 1844702 .. 1844735 - -21.3  -3.57144   GCGCCGAGCTGCAAA     CATCAAAAAACCGCC TCTC GGCGGTTTTTTGATG      TGGCTCAGGCCGGCT 100 30
C2U40_RS08510 1842761 .. 1842782 - -15.9  -5.39721   GCAGCAGATAAAAAA           GAAGCCCGC AAAT GCGGGCTTC            TTTGTGGGCGCTGAT 100 50
C2U40_RS08470 1826260 .. 1826294 -  -7.1  -5.55769   CTTGAGAAGAAAAAA     CCGCGCCCCTG GAGTTGAAGAGAA GAGGGGCGCGG     TTGGGGGTCAGAGCA 100 33
C2U40_RS08465 1824121 .. 1824137 - -13.7  -5.77988   ACACAGACAAAAAAA              GGGAGCC CTG GGCTCCC              TTTCTATTGGTGGTC 100 44
C2U40_RS08455 1820962 .. 1820987 -  -4.6  -3.44051   CCGTTACGATCAGAA         GGAGCTGGAG CGTTAT CGCCAGCTCA          ACGACATCATTCTGA  53 32
C2U40_RS08410 1813565 .. 1813581 -  -5.7  -3.14344   GATCTTGGCCACCAA              CCCCACC ATC GAAGGGG              ACGCCACCGCCTGGT  51 185
C2U40_RS08375 1804465 .. 1804481 -  -2.2  -3.14344   CAGGTGCCGCAGGAA              CGCATT AATGG ATTGCG              ATGGGAAAGGGAGCT  43 430
        trkD 1802468 .. 1802489 - -15.9  -5.09426   GTTAACGGTAAAAAA           GAGGGAGGC CAAT GCCTCCCTC            TCTCTTTAGCGCAAC 100 49
C2U40_RS08365 NONE
C2U40_RS08360 NONE
        hycD 1798507 .. 1798521 -  -4.3  -3.60098   AGTTCTCACTTTAAA               TTCAC AAAAG GTGAA               ATCGAAAAAAATGGC  55 59
        hycE NONE
C2U40_RS08345 NONE
C2U40_RS08340 NONE
C2U40_RS08335 NONE
C2U40_RS08330 1794406 .. 1794433 - -11.4  -2.86449   AGTTCAGCACAATTA        GCCCGATGTT TTTAATTT AACATCGGGC         CTCGATCACATTGCC  75 84
C2U40_RS08325 NONE
        selB NONE
        hypF NONE
        hypC NONE
C2U40_RS08305 NONE
        hypE 1785655 .. 1785674 -   -10  -2.66733   CCTTAACCGATAGGA            GGAGGAGC AGTG ACTCCTCC             CTGTAATTGACCGAA  66 53
        hypA NONE
C2U40_RS08290 1784086 .. 1784130 - -23.2  -3.48772   AAGGTTCGCAGATAA CAGATAG-AAGAGAGGGAGGC ATCA GCCTCCCTCTCTTGCTATCCG CCGTTGGTAACGGCA 100 57
C2U40_RS08230 NONE
C2U40_RS08225 NONE
C2U40_RS08220 1769076 .. 1769089 -  -2.3  -2.74322   TGCAAGTTGTGAAAC               CAGTC CATG GTCTG                ACTCCGTCAATTCCG  39 63
C2U40_RS08215 NONE
C2U40_RS08210 NONE
C2U40_RS08205 NONE
C2U40_RS08200 1764934 .. 1764944 -  -3.2  -2.92078   CCAATGACATAATTA                 CACG CCT CGTA                 GATCCGGACGGCTGA  42 12
C2U40_RS08195 NONE
C2U40_RS08190 1761934 .. 1761966 - -20.5  -3.30783   GCAGGATAAGGAAGA      GGGACCCGCCAGGCC CAT GGCCGGGCGGGTCTC      GGCGTTTTTATTAGA 100 36
         alr 1760358 .. 1760376 - -10.2  -3.23869   GATGACGGCATAACA             GGGCCCAC ATT GCAGGCCC             GTACCCGCTTGCTCA  70 38
C2U40_RS08175 1758818 .. 1758839 - -17.3  -3.61764   CCACCAATTGGCAAA           GGCCCCGTC GCAA GACGGGGCC            TTTTTGTTTATCAGG 100 87
C2U40_RS08155 NONE
C2U40_RS08150 1755825 .. 1755844 -   -15  -5.37593   GCGGAAACGAAAAAA            GCCCAGCC ATAA GGCTGGGC             TTTATAATTTGGCTC 100 35
C2U40_RS08145 NONE
C2U40_RS08140 1754575 .. 1754585 -  -2.4  -2.77182   CGTCATAGGCAATCA                 TGGC GGT GCCC                 ATCTCCTGGGCCGAG  39 98
C2U40_RS08135 NONE
C2U40_RS08130 1750792 .. 1750827 -   -14  -2.73706   ACCAAAAGAGAAGAC    GTTGAAAAGGCGGCCC CGCT GAGCCGCCTTGTCATC     CGCTGCTGCGCCGCG  85 49
C2U40_RS08125 NONE
C2U40_RS08120 1748643 .. 1748658 -  -4.6  -3.75665   TGAGAGGCCATCAAA              GCGGTG CCAG CACGGC               CATCAGCGCTTTTTC  58 5
C2U40_RS08115 1747243 .. 1747267 -    -5  -2.72745   GGGAGTGACAAACAT         CCAGTCTACCA GTTT TGGT-GACGGG          GGTGATCCTGTATGC  46 6
C2U40_RS08110 1745952 .. 1745990 - -14.7  -3.50715   ACAAGGTGCAGATAA  CACAAGGCCG-CC-CCTGC GAT GCAGGTGGGCGGCCTTGTT  GCTTGTTGGTGGTTG 100 44
C2U40_RS08100 1744536 .. 1744558 -  -3.2  -2.74523   GCAGCGGCAACATCA           CTGCCCTCCG TGG CGGGCGTCAG           TCATGGCGGCGCCCC  41 22
C2U40_RS08095 NONE
C2U40_RS08090 1740804 .. 1740815 -  -4.4  -3.10164   GGATGGACGACTTAA                CTTG CCAT CAAG                 GACACCGATGAAATT  48 247
C2U40_RS08085 1740308 .. 1740335 -  -8.4  -3.14211   ATCTTGTGTTATCAA        TCAGACCGTGGG GTTG CCTAGGGTCTGA         TTGGCACAATCTTAA  63 59
C2U40_RS08050 1729658 .. 1729678 -  -5.3  -5.00616   GTCCGGGTCAAAAAA            GCCCCCCGT AGT ACAGGATGC            TCACCATCCTCCGTC  80 39
C2U40_RS08045 1729257 .. 1729283 - -15.1  -3.94877   AGCGTGGAATAAGAA         GGGGCCGCAGC CCGGT GCTGCGGCCCT         TTTTTCATGAGGAAG 100 54
C2U40_RS08030 NONE
C2U40_RS08025 NONE
C2U40_RS08020 1726267 .. 1726294 - -12.8  -4.67353   TCATTGATTGAAAAA        GAAAAAGGCCGC GTTT GCGGCCTTTTTA         TCGGGCTTTGTCAGG 100 296
C2U40_RS08005 1723649 .. 1723678 -  -2.1  -4.63527   GGAGGAGGCTAAAAA       TGGCAGGAAT-GAT CGA AGCTATCCCGGCCA       GAAGCACTCCACCCG  66 351
C2U40_RS08000 1722180 .. 1722203 - -18.2    -4.053   ATCACCCTATATAAA          GAGAGGGGCC AGCC GGCCCCTCTC           TTTATTTCCATGCTG 100 52
C2U40_RS07990 1718477 .. 1718508 - -21.8  -2.88544   CCGCATCGGCACATA      GACAAAGAGGTCGC CTGG GCGACCTCTTTGTC       ATCTGTCCCGCGGTA 100 48
C2U40_RS07980 1715851 .. 1715869 -  -5.2  -3.75629   GATGGTCAAGGGAAA             CTCTCCCT ATC AGGGCAAG             TGGACCGCCAAGAAC  58 476
C2U40_RS07965 NONE
C2U40_RS07960 1712219 .. 1712239 - -18.3  -3.05384   GTCTCCTTGATGGAA            GAGGGCGGC CAG GCCGCCCTC            CCGTGGTTTAGGCGG 100 33
C2U40_RS07955 1711362 .. 1711381 - -13.6  -4.77036   GCGCACTATGAAAAA            GGAGAGGC CTTG GCCTCTCC             TTTTTTGTGGCTGGG 100 44
C2U40_RS07940 1707461 .. 1707487 - -25.2  -3.90112   GCTTGCTGAATGAAA         CCGCCGGGCAGC AAT GCTGCCCGGCGG         TTTTTTTATGGGACG 100 31
C2U40_RS07920 1701757 .. 1701772 - -11.8  -4.18494   CATTCCCATGCAAAA              CGGGCC CTCG GGCCCG               TTTTTTTATGCGCAT  93 53
C2U40_RS07870 1691275 .. 1691300 - -20.5  -5.14563   CTTGCCAGTAAAAAA         CAAGGCCCCGC ATCT GCGGGGCCTTG          TCGTTGCCGGGGCTG 100 50
C2U40_RS07860 1688881 .. 1688904 - -19.6  -5.40072   GCGGCTGCAAAAAAA          CAGGCCGCCC GGGT GGGCGGCCTG           TGGTGGCGCTGTGGT 100 63
C2U40_RS07855 1688597 .. 1688618 - -14.5   -5.3104   GTACCAAAAAGAAAA           GGCCTTGTC ATCT GACAAGGCC            TTTCTCGGGGAATTT 100 40
C2U40_RS07850 NONE
C2U40_RS07845 1686515 .. 1686534 - -16.4  -5.38249   ATGAAGCATAAAAAA            CGGCCCGC AAAT GCGGGCCG             TTTGTATGTGAATGA 100 49
         alr 1684532 .. 1684545 -  -2.3  -2.87132   GTGTGTTTGGAGACA               GCCAG TTTA CCAGC                ACCCTGTCTGTCAAC  41 93
C2U40_RS07830 1683262 .. 1683279 - -12.7  -5.16071   AAGCATTAACAAAAA             GGGCTCC CGCG GGAGCCC              TTTTTTAGGTTCATC 100 36
C2U40_RS07790 1674486 .. 1674513 -   -12  -3.17219   CAGAAGCGGGATGAA        TGGGGCGTGAAC AGGG GCTCACGCACCA         TTTTTCAAGCAGTTA  77 30
C2U40_RS07785 1671519 .. 1671538 - -16.4  -5.76237   TAGACAAACAAAAAA            GCCCGCGC ATGT GCGCGGGC             TCTCGAGTCGGTTCA 100 46
C2U40_RS07780 1670189 .. 1670213 - -17.3  -2.71011   AGGTTTGTCCAATGA          GTTATCCCCAG CTT CTGGGGATAAC          TCAGAAGGCAAAATA 100 26
C2U40_RS07775 NONE
C2U40_RS07770 NONE
C2U40_RS07765 1665826 .. 1665842 -  -9.4  -5.52384   TGTTCAGCAAAAAAA              GGAGCC CTGAC GGCTCC              TTTTTTGACATGGTT 100 49
C2U40_RS07760 NONE
C2U40_RS07755 1664152 .. 1664180 - -26.1  -5.00616   CTTGGCGCCAAAAAA        CAGCGGGCCGGCA TGG TGCCGGCCCGCTG        GCGATGACGTCTTCG 100 42
C2U40_RS07750 1662213 .. 1662235 - -11.3   -3.2048   TCTAAACGTGACGAA          GGGCCCGGCA GTGG TGCCGG-CCC           TGACAATTCAACCTT  77 112
        dacB 1660711 .. 1660723 -  -6.2  -3.30124   CGCCATCTTCGATAA                GGCG CGCTT CGCC                GGCCGTCATCGTCAA  56 56
C2U40_RS07740 1660315 .. 1660330 - -11.8  -4.77438   ATTGACCATGAAAAA              GGCGCC TGAC GGCGCC               TTTTTCACAACGTGA 100 43
C2U40_RS07730 1658452 .. 1658467 - -10.4  -6.06529   GACAGACAAAAAAAA              GGCTCC CGCG GGAGCC               TTTTTCATGAGCCTT 100 43
C2U40_RS07710 1653924 .. 1653942 -   -16  -5.47159   TCGGAAGATAAAAAA             CACGGGGC CTG GCCCCGTG             TTTTGTGATGGCGAG 100 45
C2U40_RS07695 NONE
C2U40_RS07690 NONE
C2U40_RS07685 NONE
C2U40_RS07680 NONE
C2U40_RS07675 NONE
C2U40_RS07670 NONE
C2U40_RS07665 NONE
        gloA 1645032 .. 1645047 - -10.4  -5.31456   CGAATCCATAAAAAA              GAGCGC CTTG GCGCTC               TTTTGGTTTTTCTGG 100 54
C2U40_RS07645 1641248 .. 1641267 - -13.6  -4.64334   AATGGCGCAAGAAAA            GAGGCTGC CGTG GCAGCCTC             TTGGGAAGGGGGCGT 100 43
C2U40_RS07640 1639659 .. 1639676 - -12.7  -4.77157   TGAAGGCAGCAAAAA             GGCGACC CTGG GGTCGCC              TTTTATGTTTATGCA 100 52
C2U40_RS07615 1631993 .. 1632026 - -15.3  -2.62263   AGCGGGGCGACAGGA     GC-GGGCGGAGCTTGC CAG GCAAGCCCCGCCGTGC     GGCTTACAGCCAGCG  95 29
C2U40_RS07610 1630135 .. 1630153 -  -9.5   -5.4505   CGCCGGAATAAAAAA             GGGGACC AGCAA GGCCCCC             TTTTTCAGCATGGTT 100 53
C2U40_RS07605 1628811 .. 1628842 -  -9.4  -4.07687   ACTTTTTTCTGAAAA      TCAAGGCGGCCTTC CCCG GAAAGCCGCGATGA       ACCTTTTTTATGCCT  81 54
C2U40_RS07590 1625443 .. 1625472 - -12.1  -2.72344   CTTCAGGGGTAACGA       GGCAGACCTGG-GC CTT GCGCCAGGCCGGCC       CGTCAGCCGGCAGGG  77 42
C2U40_RS07585 1623746 .. 1623764 -  -9.5  -5.66684   TAAGGGATAAAAAAA             CGGGGCC ATCCA GACCCCG             AGATTGTTCGTTTTA 100 106
C2U40_RS07580 1623316 .. 1623333 -  -8.3  -4.59773   GGTCAGCCTGAAAAA             GGGCGGC TACG GCGGCCC              GGGTTGACGCAGACG  88 41
        asnB 1621437 .. 1621462 - -13.3  -5.00616   GTCGGCGGGAAAAAA         CAAAGCCCCTC GCAG GAGGGGCTTGG          TATTCAGGCAAGGAA 100 54
C2U40_RS07570 NONE
C2U40_RS07565 1619990 .. 1620027 - -29.9  -2.89742   CCCAACCCTGACATA   CGGCAGGCCGGGCCTGG TCAT CCCGGCCCGGCCTGCCG    TGTTCACTCTGCCAA 100 62
C2U40_RS07525 1611369 .. 1611398 - -20.9  -3.51924   CTGCCATCCATACAA       CAACAAGGCCACC CGCG GGTGGCCTTGTTG        TTGTAGGGGGCTTGG 100 43
C2U40_RS07495 1603078 .. 1603120 - -22.1  -2.89921   ATCAATTCCCACAGA GCATAGCCAGCCCGGCGACC CAGA GGCGGCCGGGCTGGCT-TGC TGCGTGATTACTGTT 100 33
C2U40_RS07490 1601762 .. 1601788 - -23.8  -4.89852   CCATATTCAGAAAAA         GCCCCCGGCAAC CTG GTTGCCGGGGGC         TTTTTGCTATGCAGG 100 65
C2U40_RS07345 NONE
C2U40_RS07340 NONE
C2U40_RS07335 NONE
C2U40_RS07330 NONE
C2U40_RS07325 NONE
C2U40_RS07320 NONE
C2U40_RS07315 NONE
C2U40_RS07310 NONE
C2U40_RS07305 1574794 .. 1574820 - -23.8  -4.38712   GCCATCTTCAGAAAA         GCCCCCGGCAAC CTG GTTGCCGGGGGC         TTTTGCTATCCGGCC 100 90
C2U40_RS07295 1573832 .. 1573847 - -11.8  -5.06816   AGGTGCCAATAAAAA              CCCCGC CGAA GCGGGG               TGTTTGATTAGTTGC 100 33
        yccS NONE
C2U40_RS07285 1571138 .. 1571167 - -11.5  -5.55698   GACAAGGTAAAAAAA       TACCGCGCTGCATC TTG GATGG-GCGCGGTA       TTTTTTTAGATGCAT 100 31
C2U40_RS07245 1561133 .. 1561152 -   -15  -5.06414   GGCTTTGAACAAAAA            CGGGCACC CGCG GGTGCCCG             TTTTTTTGTGTCGTG 100 47
C2U40_RS07235 1558993 .. 1559006 -  -3.8  -4.04174   GGCCATACAATGAAA               GCCT GAGGTA AGGC                GTTTTCCTTATGTCA  60 72
C2U40_RS07230 NONE
C2U40_RS07225 1557503 .. 1557532 -  -6.5  -4.65838   TATACACGGGAAAAA       CAGAGTCAAAAAG CACT CGTTTTGATTCTG        AGATAAGGCTCAAAA  77 417
C2U40_RS07220 NONE
C2U40_RS07215 1555024 .. 1555053 - -12.1  -3.14344   GATGGCTGCGAGCAA       CGCGCGAGGGGGCC GGC GGCCCCCTCGAA-G       ATCAGCTGATATGCC  81 62
C2U40_RS07210 1552196 .. 1552220 - -18.6   -3.9461   GCCCGCCAATAAGAA          CGGGACCGGC GCAAG GCCGGTCCCG          TGGTCGGGTCATTGC 100 93
C2U40_RS07195 1547339 .. 1547364 - -19.1  -3.32963   AGGTCCAGTCGACAA         GCGCCGGATAC GGTT GTATCCGGCGC          TTTTTTATTGGCGTT 100 76
C2U40_RS07185 1545255 .. 1545271 - -13.7  -5.60993   CCGGGTAGAAAAAAA              GCCGGTC AGT GACCGGC              TTTTGAGGGGGATGA 100 52
C2U40_RS07160 NONE
C2U40_RS07155 1530176 .. 1530193 -  -8.3  -4.58773   GTTATCAAATCAAAA             GGGGCCC ATAA GGGCCCT              TTTTTTATTCTAAAG  88 61
C2U40_RS07120 NONE
C2U40_RS07115 1514547 .. 1514568 - -17.3  -6.02914   GCGATATAAAAAAAA           CAGCCCCGC ACGA GCGGGGCTG            TTTGCTTGGCTGCGA 100 48
C2U40_RS07080 1509167 .. 1509187 -  -8.2  -2.60763   CCGATACCCTACAAG            GGCCCGCT GGCCA AGCGGGGC            AACCCGGGCGCCGAG  53 240
C2U40_RS07040 1500863 .. 1500877 -  -4.2  -2.78384   TGGTGTGGCACCAGA               GGATTG GCG CCATCC               GGAAAATGGGGTGCC  43 157
C2U40_RS07035 1499887 .. 1499912 - -19.1  -3.68222   CTGTAACTGCAATAA         CAAAGGCGGCC AATG GGCCGCCTTTG          TTTTATGTCGTGAAG 100 45
C2U40_RS07005 1488807 .. 1488853 - -12.9  -3.01712   GCGCCGGGTTGAACA GCGCGGTTCGGCCGCCGGATCC TCGA GGACCCGGCGGCCGCACTAT-C AGGCGTGGGCGGCTT  83 24
C2U40_RS07000 1487955 .. 1487978 -  -3.8  -5.00884   ATCCTTTGGAAAAAA          GCGGC-CGCAT TAT ATCCAAGCCGC          CCCCCCAGAGCGACC  76 167
C2U40_RS06995 1487224 .. 1487262 - -17.7  -3.19389   CAACTCATTGAGCAA  CCAAT-AAAAACGGCGCC ATGG GGCGCCGTCTTTCATTGG   GGTGTCTTGGCAGGC 100 44
C2U40_RS06990 1485784 .. 1485802 - -12.4  -5.31275   TCGCAGCATAAAAAA             GCCCGTCA TCA CGACGGGC             TTTTTGCTGGGCGGC 100 53
C2U40_RS06980 1484026 .. 1484043 -  -4.8  -3.06183   GTCATCCGCACTCAA             CCCTGC TGCTTG GCAAGG              CGCACCAGGGCGGCC  48 4
C2U40_RS06975 1483547 .. 1483569 - -11.3  -3.52316   GTGAGAGACAAGCAA          GGCCCT-GGC GTCA GCCGAGGGCC           TTTTTGAAGAAGACG  82 13
C2U40_RS06955 1480418 .. 1480431 -  -3.1  -2.77899   CTCGTCTATCAAGCA               GATGC AATT ACATC                GAATGTCATTGAGTG  41 48
C2U40_RS06950 1479207 .. 1479224 - -12.7  -3.53012   CGTTTCTTGTGCAAA             CACCCGC CGAA GCGGGTG              TTTGCAGGTGCCGTC  86 55
        glgC 1477661 .. 1477679 -  -8.1  -4.83759   AAGCAAATGTAAAAA             GGGAGCC TCTAT GACTCCC             TCTGCTATGACTGTT  90 46
C2U40_RS06940 1477001 .. 1477035 - -18.8  -2.91264   CCCCGCATTCAGATA     TATAAAAAGACCCGCC GCT GGCGGGTCTTTTTATT     GGCGCGTGTTCGCTG 100 75
C2U40_RS06920 1473510 .. 1473543 -    -6  -3.51365   TTATACCTGAGACAA    GCCTGCGCC-AT-CCG TCCC CGGTATTGGCACTGGC     CCGTCAAAGGTCTTG  58 209
C2U40_RS06915 NONE
C2U40_RS06910 NONE
C2U40_RS06905 NONE
C2U40_RS06900 NONE
C2U40_RS06895 1469415 .. 1469436 -  -8.7  -2.73635   CAAAGCCCGCCAAAT           CGCCACTCA CGAC TGACTGGCG            GCGAGAGGTAGCGGG  60 47
C2U40_RS06890 1468571 .. 1468598 - -14.2  -4.05033   CGCAGGCGAGACAAA        CAAAAGGGGCCC CGGC GGGCCCCTTTTT         CATGCCGCCCCTCAG 100 37
C2U40_RS06875 1464325 .. 1464362 -  -3.5   -3.0682   TCCAATTATAAAGGA   CCATAGGCTCGATTA-GC GAA GCGTAATCGGACGTATGA   GAAATAAGGTTTTAT  46 465
C2U40_RS06870 NONE
C2U40_RS06865 1460881 .. 1460900 -   -15   -5.8187   GAGCCAATAAAAAAA            CCGCAGCC TTAG GGCTGCGG             TTTTTTTGTGGCCTG 100 441
C2U40_RS06855 NONE
C2U40_RS06850 NONE
        lpxH 1457275 .. 1457301 - -13.8  -3.66378   TAGATCGCAGGCAAA         CAAAAGGCGGGA TCT TCCCGCCTTTTT         TATTGCCGCCAGCCA 100 51
C2U40_RS06820 1451793 .. 1451820 - -18.4  -3.66178   TCCTTCAACGGCAAA        GGGCCGGGGGGA GGCA TCCCCCCGGCCT         GGTGGTCTCAACGGA 100 33
C2U40_RS06815 NONE
C2U40_RS06810 1448718 .. 1448739 - -15.9  -3.90082   GACGAAATGATGAAA           GAGGGGAGC CTGG GCTCCCCTC            TTTATTGCTGGGCTG 100 83
C2U40_RS06800 NONE
C2U40_RS06795 1444485 .. 1444504 - -13.6  -3.23638   TCAAAGACTTACTAA            GGCCGCTA GCAA TAGCGGCC             TTTTTGTTTTTCATC  89 67
C2U40_RS06735 1433783 .. 1433799 -  -3.6  -2.79183   TGCATCGGCATCATA              CCGCTG GCGCT CATCGG              GGTGCTGCTGGCGCC  43 460
C2U40_RS06725 NONE
C2U40_RS06720 1431561 .. 1431595 -  -7.1  -2.53876   GGGGATGGCAAGGCA     GTGCCTCGTCAGC GCGCCAGAG GCTGACGAGGCGG     GGGGATCAGCGGGGG  52 31
C2U40_RS06715 1429924 .. 1429942 - -11.7  -4.58395   CGCATGTTGCAAAAA             GCCGACC TCATG GGTCGGC             TTTTTTGTTGGGTGT 100 53
C2U40_RS06610 NONE
C2U40_RS06605 1411517 .. 1411532 - -10.4  -5.35354   CAGAGAATGAAAAAA              GCCACC GGAA GGTGGC               TTTTTGCTGGATGGG 100 48
C2U40_RS06600 1410654 .. 1410676 - -12.1  -5.81412   CGTAGCTAAAAAAAA           TGGTCAACC TGGGT GGTTGACCA           ATTCTTCAGCAAATA 100 224
C2U40_RS06585 1406191 .. 1406205 -  -7.1   -2.5742   TGCAAACATGAAGAT               GGCGA GCAAG TCGCC               CGTCTGCTGGCCGAG  48 143
        fadE 1401375 .. 1401393 - -11.7    -5.252   TAGCCCCATAAAAAA             CGCCTCC ACTTA GGAGGCG             TTTGACTATCAATGT 100 46
C2U40_RS06560 1399629 .. 1399661 - -17.7  -3.06969   TAAGGCACTGCAATA      TGGCGCCTCCGATGC AGT GCATCGGAGGCGCTG      AGCCACTAGAGGTTA 100 95
C2U40_RS06485 1384191 .. 1384207 -    -3  -3.02537   TTAGAAAAAAAGTGA              TCTGAA AAACA CTCAGA              AGGTGACCACCACGG  43 21
        flgM NONE
C2U40_RS06475 1383051 .. 1383061 -  -6.8  -3.29829   CACAGCCCCTTACAA                 CCAG ATG CTGG                 TGGATGGTCGGCGCT  55 343
C2U40_RS06460 1379883 .. 1379899 -  -2.1  -3.63515   CGCCATCGGCAACAA              GGTGGTG GGA CTGCACC              GGGAGCGGGTGGGTG  49 126
C2U40_RS06450 1377775 .. 1377802 -  -7.6  -3.04144   GCCCCATGGTGAAGA        TCTGCGCC-GCGC CGT GCGCTGGCTCAGC        GAGCACCATCAACAC  54 148
C2U40_RS06435 NONE
C2U40_RS06430 1373430 .. 1373445 - -10.4  -3.85698   CTTGCCGGTCATAAA              GGGGCA CAGC TGCCCC               TGGTGGGGCCCGTCA  79 38
C2U40_RS06425 1372535 .. 1372557 -  -3.3  -4.17657   CAGGAGAGGCCAAAA           GAGGACGAG CATAC CCCAGCCTC           GGTGGGCGCCGTCAA  60 87
C2U40_RS06420 1371560 .. 1371591 -    -3  -2.80796   GCTCATCATGGAAAG      TTTCCCCGCC CTGGTCAATGGC GGCGGGCAAA       TAAGGATCAGGCTGC  41 32
C2U40_RS06415 1369551 .. 1369572 -   -13  -5.14563   CCCGGTAGCAAAAAA           GACCCCGC CACTGT GCGGGGTC            TTTTTGTTGGTGGCC 100 79
C2U40_RS06400 1367878 .. 1367891 -  -8.1  -4.55798   GATGGCAAAGTAAAA               GGACC CGAA GGTCC                TTTGCTGTTTGCCTG  86 103
C2U40_RS06360 1360654 .. 1360683 - -20.9  -2.87132   GGCTCGGGCTACAGA       CAAGGGGAGCATC CAAT GATGCTCCCCTTG        TTGTTTGGTACGTGT 100 105
C2U40_RS06220 1322860 .. 1322879 - -12.2  -3.08966   GCAAACTTGAGCCAA            TTTGGCGC CGGG GCGCCAAA             GGAATGAAAGGAGAT  79 101
C2U40_RS06215 NONE
C2U40_RS06210 1320798 .. 1320816 -   -16   -5.7946   GCGCCAACAAAAAAA             CGGGAGCC GAT GGCTCCCG             TTTTTTTATGCGCTT 100 47
C2U40_RS06175 NONE
C2U40_RS06170 NONE
        trpD NONE
C2U40_RS06160 NONE
        trpB NONE
C2U40_RS06150 1308303 .. 1308321 - -14.6  -4.37506   AGCAGGAAATAGAAA             GGGAGCCT ATC AGGCTCCC             TTTTCGCAGACATGG 100 68
C2U40_RS06120 NONE
C2U40_RS06115 1303404 .. 1303424 -  -6.2  -2.69598   AGTGTGATAAAAAGT           GGGCCATTG TAGG CAAT-GCCC            GTCATGGGCTCAAGG  51 76
C2U40_RS06110 1303060 .. 1303090 - -15.5  -3.64682   GATGAAAGGCCCAAA       GCAGAACACCGGC ACAAG GCCGGTGTTCTGA       GCAGCATGGCGGCGG 100 69
C2U40_RS06105 1302342 .. 1302359 - -11.3  -5.10154   ATCGAAAAGCAAAAA             CCTCTGC CCGG GCAGAGG              TTTTTTTATGGCGAA 100 60
C2U40_RS06090 1298611 .. 1298628 - -12.7  -3.40403   CCGTTGTCACCAGAA             CGGGGAG CTGG CTCCCCG              CGAGCCTTTGTTGCG  76 247
C2U40_RS06080 1298176 .. 1298196 -  -3.9  -3.17051   TCCGTAGTAGCAATA            TGGACCTAG CTT CTCAGCCCA            CTCCCATAGTGTTAG  47 18
C2U40_RS06065 1295267 .. 1295284 -  -4.2  -3.60998   ATATATAAGAAGGAA             TGGTTA TTTCCC TAACCA              ATTAGCCTATCAAGG  53 94
C2U40_RS06060 1293712 .. 1293725 -  -5.3  -2.78816   TTATGTGGGATTAGA               TTTGC ACTG GCAAA                CGGTTGAAAAACTGT  48 299
C2U40_RS06050 1291931 .. 1291975 -  -9.4  -3.72576   CGTTTCCGTAGTAAA CGGGTG-CAGAAGGCCC-TGAC CCG GTCACGGGCCTTCTGTCAGTCA ATAGAAGGTGGGGCG  76 55
C2U40_RS06045 NONE
C2U40_RS06040 NONE
C2U40_RS06035 NONE
C2U40_RS06030 NONE
C2U40_RS06025 1286230 .. 1286245 - -11.8  -5.24129   TCTGTTCATAAAAAA              GGCCGC AGAT GCGGCC               TTTTGACTATATGCG 100 45
C2U40_RS06010 1283912 .. 1283928 -  -6.5    -3.452   GGCAAACAGCGATAA              CCATGTG CAC CACAGGG              CCAGTTTGATGTTTT  58 65
C2U40_RS06005 1283216 .. 1283233 - -12.7  -3.48115   GCGGCATAAAACAGA             GGGCACC TTCG GGTGCCC              TGATGGTGGTGAATG  86 56
C2U40_RS06000 NONE
C2U40_RS05995 NONE
C2U40_RS05990 1281396 .. 1281421 -  -7.5  -5.69262   CCAGAAAAAGAAAAA         CCCCGGCAGCGC GAG GCA-TCCCGGGG         CTAAATGCAAAGAGG 100 320
C2U40_RS05980 NONE
C2U40_RS05975 1280251 .. 1280272 - -11.6  -4.35524   CCTTGAAATGCAAAA           GGCCACCT GCAGTG AGGTGGCC            CTTTAGGTGATATCG  95 89
C2U40_RS05970 NONE
C2U40_RS05965 NONE
C2U40_RS05960 1279090 .. 1279112 -  -9.1  -3.92659   TCCTTAAAATGCAAA           CAGCCCCTC GGAGT GAGGGGTTG           TATGGGGTCTTGTTT  78 58
C2U40_RS05955 NONE
C2U40_RS05950 1278116 .. 1278139 - -15.3  -3.71527   CCCCAATGATGCAAA          GGGCCAGCC TGTGAG GGCTGGCCC           TTTATGCTGTTTGGG 100 87
C2U40_RS05925 1272028 .. 1272038 -  -8.2   -3.0644   AGTGAAGGGGGAAGA                 GGCC ATC GGCC                 GCTACCGGAAATCGG  57 283
        torS 1267432 .. 1267454 -  -7.6   -4.0371   CATCGTGGAGACAAA           GGCCGTACCC GGG GGACAGGGCC           GGATTACATCCCAGT  74 458
C2U40_RS05870 NONE
C2U40_RS05865 1257039 .. 1257059 - -18.3  -3.89212   CACTCACATAGCAAA            CGGGCCTCC ACA GGAGGCCCG            TTTCGTTATGGTCGG 100 47
C2U40_RS05850 1254681 .. 1254714 -   -17  -2.65993   ATGAGACCCATACTA     CCCTCCAATATTGA TGACAT TCAATATTGGAGGG      TGTTTTTTGAGCATG 100 61
C2U40_RS05835 1251750 .. 1251770 -  -3.1  -3.86346   GGATTTTGCCAGAAA            CCTCCGGCG TTA CATCCGAGG            CATCTTAGCGAGCGC  56 216
C2U40_RS05815 1247257 .. 1247268 -  -5.8  -2.94354   CCAGATATCGACACA                TGGC CATC GCCA                 CTCTCCTCCCTTTGC  52 75
C2U40_RS05810 1246258 .. 1246291 - -10.9  -3.19192   GTGGATGCAAGTGAA     GGCGAGGGGCCACATC CGG GGTG-GGCCGCCCGCC     GCAGCGGGCTCAGCG  74 35
C2U40_RS05805 1245351 .. 1245369 - -10.2  -2.87132   GGGCTTGGTCACAGA             GGGGGCTT CAA ATGCCCCC             TCTGTTGTCGTTATC  68 39
C2U40_RS05800 NONE
C2U40_RS05795 1240682 .. 1240700 - -17.4  -5.93809   GGCGGATAAAAAAAA             GCCCCCGC ATG GCGGGGGC             TGTGACTTACGACTT 100 32
C2U40_RS05790 1240053 .. 1240073 -  -7.6    -4.386   CAAGGCGGCAGAAAA           CGGACAAGC CGAG GCTTG-CCG            CTGCCGCGAGAGAAG  78 47
C2U40_RS05785 NONE
C2U40_RS05780 1235137 .. 1235149 -  -4.7  -4.07568   TCTTGGTTGTCAAAA                GGGGC GCT GCCAC                CGGGTTAGCCGGCGG  62 30
C2U40_RS05775 1234710 .. 1234728 -   -16  -5.13722   CGCAGTAAAAGAAAA             CGGCGGGA TGA TCCCGCCG             TCTTTTATTGAAATG 100 48
C2U40_RS05755 1227796 .. 1227819 - -16.8  -2.96274   GGGCGCACAATGACA          GAAGGGCCAC TTGG GTGGCCCTTC           TCGTTTCACACGTTC 100 60
C2U40_RS05725 1222005 .. 1222028 - -12.4  -3.80573   GCTAGGACGATGAAA          GCGCGGTGAG CATC CTCACCGCTC           TCGTTCCACCTTCTG  91 65
C2U40_RS05720 1221237 .. 1221257 - -18.3  -3.70076   TGAAACGGATTGAAA            GGGGCCAGC ATG GCTGGCCCC            GGATATCAGTCGTGC 100 45
C2U40_RS05715 1220288 .. 1220321 - -15.4  -4.11216   CCCGCATCCTGAAAA     GCAAAAGCCCCGCT GGCAAT AGTGGGGCTTTTGC      ATTTTCAATGGTGGA 100 49
C2U40_RS05685 1212236 .. 1212256 -   -14   -4.1399   CGACCCAGATATAAA            GAGCCGGC CCTGC GCCGGCTC            TTTTTTTGGTTCATC 100 36
C2U40_RS05665 1207003 .. 1207021 -  -2.3  -3.29043   AAGCGCGCGTCAGAA             CAGCTTG CTGCC CCAGCCG             AGCTTGTTGCGCAGC  45 1
C2U40_RS05660 1205141 .. 1205170 -  -7.1  -3.60792   CCGCTAAGCCGCAAA       CCGCCGTCACCAAG GGG CTGGGTTAC-GCGG       GGTACCTGATCCTCA  63 76
C2U40_RS05650 1203703 .. 1203740 - -10.3  -2.93623   GGGCTGAAAAGAGGA   GTGGGCGGCGAGTCGGC AGAG GCCGGCCCGCCGCCTGG    GGTCAGAGCTGCTCG  68 28
C2U40_RS05645 1202919 .. 1202945 - -19.5  -3.03243   AGGGAGGTGGCAACA         GGGTGCCCACC TCGCG GGTGGGCACCC         CGGTCATCAACCGAC 100 32
C2U40_RS05640 NONE
C2U40_RS05635 NONE
C2U40_RS05630 1198214 .. 1198260 - -17.2  -2.67017   AAGGGGAGAAGTAAG GGAGAGGCCTCATGCCCTCGCA CCG CGCGAGGGCATGAGGCAAGGCC GGTCAGCTGCGATCG 100 28
C2U40_RS05625 1197275 .. 1197291 -  -6.5  -4.46926   TATTTCAGGACAAAA              TCAGCTG ATT CAGCTGT              CCATCACGTCGTGAC  74 18
C2U40_RS05615 1195879 .. 1195903 - -18.7  -4.18908   ATATCTCCAAAATAA          TAAGGCTCCCG TCG CGGGAGCCTTA          TTGCTGATGGTGGTT 100 40
C2U40_RS05600 1193360 .. 1193384 - -10.8  -5.14965   ATCTCCATGAAAAAA         GAAACACCGCC AGCT GGCGGTG-TTC          TTCTTTATATGGGCT 100 42
C2U40_RS05585 NONE
        gabT 1187846 .. 1187868 -  -4.8  -2.52464   TCCGGGCCGAAGGGA           TCAGGCTGAC GGT ATCAACCTGG           GCATAGGGGGCGCCA  44 329
C2U40_RS05575 1186432 .. 1186452 - -15.4  -5.86332   TGAACCTAAAAAAAA            GCGCCCGC AGAGG GCGGGCGC            AGTGAACGCAAAGAA 100 44
C2U40_RS05565 NONE
C2U40_RS05560 1183259 .. 1183282 - -16.8  -3.25823   CGGCGTGCACAGCAA          GAAGGGGAGC CATG GCTCCCCTTC           TGCATTTGTGCTTGT 100 52
C2U40_RS05550 1181286 .. 1181298 -  -4.8  -3.54424   CCCTATGTCGTGAAA                TGCC GAGAG GGCA                GTGAGTGCGGCATCT  53 154
C2U40_RS05545 1180734 .. 1180753 - -12.1   -3.4252   GTTTACTTATGACAA            GGCCGGC GCAGTG GCCGGCC             CTGGGGGATCAAACA  86 65
C2U40_RS05540 1179731 .. 1179750 - -10.7  -5.24129   CGGCGCCATAAAAAA            TGGCGGG AAGCGA CCCGCCA             TCTTGCACTGTCTGG 100 53
C2U40_RS05535 1176184 .. 1176200 -  -4.3  -2.94595   AACGGCTATTACACA              CCCTGCC GCT GGCAGAC              TCCAGCCCGAAGGCG  47 158
C2U40_RS05530 1175387 .. 1175410 - -18.2  -3.48269   GGGAGTAAACAGCAA          GAGGGGCGGT ATCG ACCGCCCCTC           TTTTTTGTTGCTGTT 100 80
C2U40_RS05510 NONE
C2U40_RS05505 NONE
C2U40_RS05500 1169268 .. 1169299 - -13.9  -3.55071   GGATAGGGGGCTAAA      TCGTGAGCCAGCCA AGGAA TGGCTGGCTCA-GA      AAGGTGGGGGGCCTA  95 140
C2U40_RS05490 1166612 .. 1166629 - -12.7  -5.28176   GGCAGCCATAAAAAA             TCCCCCG ATAT CGGGGGA              TTTTTGTTTTCTGCG 100 75
C2U40_RS05460 1158887 .. 1158904 - -12.7  -4.27316   CGGCCCAACGCAAAA             GGGACGC CTCG GCGTCCC              TTTTGCTATTTGCAC  95 70
C2U40_RS05450 1157438 .. 1157448 -  -2.4  -2.57243   CTATGAGGACAACAG                 CCTG GTG CGGG                 AGCTGGTCAACCGGC  38 363
C2U40_RS05435 1155700 .. 1155728 - -16.1  -4.11295   TGAAAGGCACAGAAA        TGGAAAAGGCGCC AAC GGCGCCTTTTCAA        CTCGGGAGGAGGGAG 100 43
C2U40_RS05420 NONE
C2U40_RS05415 1151485 .. 1151513 - -18.9  -2.79133   GAAGGGGCCATTATA        GGGGCCAGTCGAC GGT GTCGACCAGCCCC        ATTTTTAGCCGTATG 100 160
C2U40_RS05410 NONE
C2U40_RS05405 1150567 .. 1150584 - -11.3  -4.54727   GGTTTCAAAGCAAAA             GGGCATC GAGA GATGCCC              TTTTCTTTTCGGCGT 100 49
        tsaA 1148564 .. 1148593 - -14.5  -3.33815   AGCCGCGGCAAGCAA       CAAAAAACCACCC GGGC GGGTGGTTTTTTA        TGGCTGGCTCACAGG 100 34
        cysK 1144174 .. 1144193 -   -15  -4.56367   TAGCTCATAAAGAAA            CGGCGCTC CTGG GAGCGCCG             TTGTTTTGAAATAAT 100 49
C2U40_RS05370 1143511 .. 1143526 -    -9  -4.24342   TGGGGGAGGAATAAA              GCTGGA TTAC TCCAGC               TCGTCCATCAGGGCA  82 16
C2U40_RS05365 NONE
C2U40_RS05360 1141122 .. 1141168 - -16.1  -3.55444   GGCCTAGCCGGCAAA CGCC-CATAAAAAAACCGAAGC CAGG GCTTCGGTTTTTTGTTGCGGCG ACGGGCGCTCGGCCC 100 49
C2U40_RS05345 1138546 .. 1138565 -   -15   -3.6502   CAGGCCTGATCCAAA            GAGGGGCG AGTA CGCCCCTC             TTTGCTGGCAAGGGA 100 41
C2U40_RS05315 1130905 .. 1130918 -  -9.5  -5.61596   ACGCCCATAAAAAAA               CCGCC CGGA GGCGG                TTTTTGCAATCAGGC 100 54
         ggt 1128935 .. 1128950 - -11.8  -5.34555   GGAGAGCACAAAAAA              GCGGCC GACT GGCCGC               TTCGCTGCATGGGGG 100 64
C2U40_RS05305 1126922 .. 1126939 - -12.7  -5.25803   AAGGGGCATAAAAAA             GAGGGGC CAAG GCCCCTC              AGGTTCACTGGATGG 100 45
C2U40_RS05300 1125321 .. 1125347 -   -21  -3.01912   GCAGATGCAGAGACA         CAAGAGGGAGGC CTG GCCTCCCTCTTG         TTTTAGGTGCGTCAC 100 55
C2U40_RS05290 1123333 .. 1123350 - -14.1  -6.02914   GGCAGATAAAAAAAA             CGGCGCC CGCA GGCGCCG              TTTTCAGCTTGTTCA 100 48
C2U40_RS05285 1119861 .. 1119876 - -11.8  -5.38249   ATGAACCATAAAAAA              GGCCCC TTGC GGGGCC               TTCGAGTGGCATGGC 100 49
C2U40_RS05275 NONE
C2U40_RS05270 1116404 .. 1116425 - -15.9  -4.79223   TGAGATGATGAAAAA           GAGGCCACC CCAG GGTGGCCTC            TCTGTTTTGTCGGTG 100 70
C2U40_RS05260 NONE
C2U40_RS05255 1113100 .. 1113123 - -18.2  -3.66784   GCAGTTGCAATAGAA          GGAGGGTGGC CATG GCCACCCTCC           TTTTTTGTTACCTGA 100 45
C2U40_RS05245 1109950 .. 1109967 - -14.1  -3.87323   CAGGATGAAAGAGAA             GGGGCGC TGCG GCGCCCC              TTTGTTGTGTCTGCC 100 43
C2U40_RS05195 NONE
C2U40_RS05185 NONE
C2U40_RS05180 1096660 .. 1096685 -  -7.5  -5.28176   GCCAGTCACAAAAAA         GCCCGTCAATA TTGG TCTTGGCGGGC          TTTTTTACGGGCGAG 100 52
C2U40_RS05165 NONE
C2U40_RS05160 1091284 .. 1091294 -  -2.4  -2.80816   TGGCTAGGGATGACA                 GTGC GCT GCGC                 CATGGTCAGTTCTTC  39 31
C2U40_RS05155 NONE
C2U40_RS05150 NONE
C2U40_RS05145 1088131 .. 1088141 -  -2.4  -2.87132   CCGGCGGGGTAGACA                 CCGG TAT CAGG                 CCACTCGTCCCTGGA  41 21
C2U40_RS05140 1086991 .. 1087009 - -17.4  -3.50853   GCCTTTTAACGACAA             CGCCCCGC TTT GCGGGGCG             TTTTGCTATGGGTGG 100 31
C2U40_RS05090 1079017 .. 1079033 - -10.9  -2.62616   TCAGTTGGTAGAGCA              CGACCTT GCC AAGGTCG              GGGTCGCGAGTTCGA  62 250
C2U40_RS05075 1075259 .. 1075286 -  -7.6  -6.22802   CTGCACAAAAAAAAA        CCGCCCCGGC AAGTGTGA GCCAGGGCGC         AGATTGGGCGGTGGA 100 43
C2U40_RS05070 1073189 .. 1073208 - -10.6  -3.01924   GATGGGCGGGGAAGA            GGGCCCCC CGCA GGGGGCCG             GGATTGATTAGCTGT  72 33
C2U40_RS05065 NONE
C2U40_RS05060 NONE
C2U40_RS05055 NONE
C2U40_RS05050 NONE
C2U40_RS05045 NONE
C2U40_RS05040 NONE
C2U40_RS05035 1064404 .. 1064421 - -14.1  -5.81032   GAATCGTAAAAAAAA             GGCGGCC ATCG GGCCGCC              AAGGAAAAAAGATAA 100 43
C2U40_RS05030 1062621 .. 1062651 - -24.2  -3.62775   ATCACTCGTCAATAA       CGACAGAAGCGCCA TTG TGGCGCTTCTGTCG       GGTGGCTGGCAAATG 100 43
C2U40_RS05025 1061977 .. 1061993 - -13.7  -3.45324   CACTCTGATGAAAGA              GGCCCCT CAC AGGGGCC              TTTTTGTTTTCGGAT  79 277
        astB 1057558 .. 1057600 - -16.5  -4.27316   CTGGGCAACGTAAAA CCCAATAAAAAAAGCCGGGC ACTT GCCCGGCTTTTTC-ATGGGG TCGGCGCTGCAGGCC 100 52
C2U40_RS05000 1055479 .. 1055495 - -13.7  -3.03124   GCGGATGTTGCAACA              GGGTGCC GAC GGCACCC              TATTGAATGTAACCC  87 74
C2U40_RS04995 1054357 .. 1054373 -  -2.1  -3.01712   CCCTGTTCGCCAACA              GCATCCG CAC CGGTTCC              ATCATGGCGGGGGCG  41 212
C2U40_RS04985 NONE
C2U40_RS04980 1050329 .. 1050350 - -15.9  -5.31519   ATATCGAAATAAAAA           GAGGCCACC CTTG GGTGGCCTC            TTTCGTTGTGGCTGT 100 50
C2U40_RS04970 1047901 .. 1047919 - -14.6  -5.60993   CCGGGCATAAAAAAA             CCGGCATC CTG GATGCCGG             TTTTTTACTGTGCTG 100 58
C2U40_RS04965 NONE
C2U40_RS04960 NONE
C2U40_RS04955 1043663 .. 1043681 - -11.7  -4.30719   CGCCGCCATAAGAAA             GGCCTCC CTTGC GGAGGCC             TTTTTGTTGGCTCAT  95 56
C2U40_RS04945 NONE
C2U40_RS04940 1039800 .. 1039829 - -13.5  -4.10953   AGGCAGTAAATGAAA       CCGCAGGGCCGTC GAGT GACGGCCCTGCTT        GATTGGGTCAGACGG 100 63
C2U40_RS04930 1038321 .. 1038331 -  -8.2  -3.65902   GCCAGCGGATGCAAA                 CCGG GAT CCGG                 TTTCTATGAGGTGGC  69 321
C2U40_RS04925 1036747 .. 1036769 - -15.6  -5.63517   TCGTTAAATAAAAAA           GAGACCGGCC ATC AGCCGGTCTC           TTTTTATTATTCAGG 100 48
C2U40_RS04915 1032362 .. 1032378 - -13.7  -4.48987   GGCGGACAAGCAAAA              GGGGAGC CAG GCTCCCC              TTTATACCACAAGCG 100 47
C2U40_RS04910 NONE
C2U40_RS04905 1031004 .. 1031017 -  -2.3  -3.38812   TCTGGTTCAAGAAGA               GGGGT TTAA ATCCC                TTGTGCTCATAGATG  45 44
C2U40_RS04900 1030218 .. 1030233 -  -8.2  -2.62184   TCCTTCTGTAGAGGA              GCCCGC CTTG GCAGGC               TCCGGGAGTTAGGCC  59 34
C2U40_RS04895 1029185 .. 1029206 - -17.3  -4.62051   AAACAGGATAGAAAA           GAGGCGGCC CCGG GGCCGCCTC            TGTTGTTTATCGCTT 100 61
C2U40_RS04885 1026821 .. 1026841 - -11.1  -4.09864   ATTGATTCCTCAAAA            TGCCTCGCA AAA TGCGTGGCA            AACGGCATCAGCTGT  88 33
C2U40_RS04880 NONE
C2U40_RS04865 1022057 .. 1022074 -  -5.5  -3.16564   GCGCCAGTTCATCAA             GGGCGAT CCGG ATCGACC              CGGGCCAGCAGGCGC  52 4
C2U40_RS04860 NONE
C2U40_RS04855 1018895 .. 1018913 -   -16  -3.78934   GTTGTCTGACAACAA             GGGGAGCC ACT GGCTCCCC             TTTCGTTTGGGTGTT 100 219
         tal 1015679 .. 1015702 - -18.2  -5.60993   GCGCCCATAAAAAAA          CCGGGTTCCC TTGC GGGAACCCGG           TTTTCATCGGCTCAT 100 52
C2U40_RS04840 1015357 .. 1015382 - -20.5  -5.40474   ACTCTCTTAAAAAAA         CAAGGCCCCGG TTAA CCGGGGCCTTG          TTTTTACAGTTCGAT 100 29
C2U40_RS04825 1012687 .. 1012702 -  -7.5  -5.66684   CAAGCCATAAAAAAA              CGGCC AGTTTG GGCCG               TTTTTCATGATACCG 100 57
        lolB NONE
C2U40_RS04780 NONE
C2U40_RS04775 1003798 .. 1003809 -  -5.8  -3.02144   GCACTCCCGGCAAGA                CTGC TGCG GCAG                 ATGAATCGATATACC  53 60
C2U40_RS04770 1002544 .. 1002573 - -19.5  -4.73388   AACTGGGACTAAAAA       GACAAAAACCGCC AGCT GGCGGTTTTTGTC        ACAACAGGGTCTATC 100 39
C2U40_RS04765 1000437 .. 1000457 - -15.4  -4.28361   CCAACGGCAGCAAAA            CGGGCCCC TGCGT GGGGCCCG            TGGTGTGGCTTGCCG 100 55
C2U40_RS04760  999614 ..  999627 -  -2.4  -2.57344   TACCTTGCTGACAAC               CTCT CGTTAC AGAG                CATGAACAGGTTCTT  38 91
C2U40_RS04755  998280 ..  998311 - -18.2  -3.68619   TGCAACCCATGGAAA      CGA-AGAACCCCGGA TTT TCCGGGGTTCTGTCG      CTGCTTCAGGGCTTC 100 81
C2U40_RS04750  996902 ..  996925 - -12.4  -2.71681   GAATTTTTGCAATCA          GGCGCTCCCT GAAT AGTGAGCGCC           CTGCCTCAGTGTCGG  77 49
C2U40_RS04675  978058 ..  978076 -  -2.4  -3.52204   CGACGGCGAAACCAA            GCC-CTG CATCAT CAGCGGC             CCATCGACCACTTAC  47 104
C2U40_RS04645  975272 ..  975305 - -14.7  -2.62184   CCCCCTGTCAGATGA     CATCGTAACGTTACG ATAA CGTAGCGCTACGATG      TTACGGTGCTGCCTC  90 26
C2U40_RS04630 NONE
C2U40_RS04625 NONE
C2U40_RS04620  972691 ..  972705 -  -7.2   -3.8381   ACAGAGACTATCAAA               CATCTT TTA AAGATG               GCTGGGGCACTAGGA  66 24
C2U40_RS04615 NONE
C2U40_RS04610 NONE
C2U40_RS04605 NONE
C2U40_RS04600 NONE
C2U40_RS04595  972113 ..  972126 -  -8.1  -5.80817   CCGAATACAAAAAAA               CCAGC CTGA GCTGG                TCTGTTTGGTACTGC 100 47
C2U40_RS04585 NONE
C2U40_RS04580 NONE
C2U40_RS04575 NONE
C2U40_RS04570  967180 ..  967190 -  -3.2  -3.15407   GACACTATTAACACA                 TCGC TCG GCAA                 AGACCAAATCCGGCT  45 40
C2U40_RS04565  966731 ..  966747 -    -5  -3.35992   ACGCAGTGCAAGGAA              GCGGGC TACTG GGCCGC              CTTGGCCTGTTCGCT  51 14
C2U40_RS04560  964859 ..  964886 -  -8.4  -2.79327   CGAGGGGAGGTAAAT        CATCGGGGGGCAA GGG CCACCCCCCG-TG        GCGGAGGATAGCGCT  60 46
C2U40_RS04555  962594 ..  962611 - -12.7  -5.14965   ACCGGCATCAAAAAA             GGGCTCC TAAA GGAGCCC              TTTTGAATCGCCTTG 100 130
        nifJ  958638 ..  958661 - -18.2    -3.322   ACCGCGACATAGCAA          CAGGGCTCCC CATG GGGAGCCCTG           TTTGTTGGTGGGTCT 100 47
C2U40_RS04540  956427 ..  956445 - -11.7  -4.18018   CTGCTGCATGCAAAA             CGCCTCC CTTGC GGAGGCG             TTTTCATTGGTGGCA  93 57
C2U40_RS04435  935443 ..  935469 - -15.2  -4.84761   ACAGGGTCACAAAAA         GAAAACCGGCGC ATT GCGCCGGTTTTT         TTATCTTCTGCTGTG 100 43
C2U40_RS04410  929846 ..  929861 - -11.8  -3.57119   GACATATGTGCGAAA              GGGGCC TGCT GGCCCC               TTTTGCATGTTTGCG  85 60
C2U40_RS04400 NONE
C2U40_RS04395  927086 ..  927101 - -10.4  -4.72272   GTCGGCCATCAAAAA              GGCAGC CTAG GCTGCC               TTTTTCGTTTTGAGC  95 62
C2U40_RS04385 NONE
C2U40_RS04380  921382 ..  921401 -  -5.6  -3.45023   TGATGACCAGGATAA            TGACCCCG ATGG CGAGGACA             AGCTTGTTCTTGATG  56 177
C2U40_RS04370 NONE
C2U40_RS04365 NONE
C2U40_RS04360 NONE
C2U40_RS04355  915698 ..  915714 - -10.8  -5.60993   GGGGCCATAAAAAAA              CCGGGC ACTTG GCCCGG              TTTGTCATTGCGTCA 100 49
C2U40_RS04345  914035 ..  914051 -    -5  -3.75738   GACCACCATCAACAA              CCGGGC CTGGC GTCCGG              TTTTTTTATGGCGGT  58 134
C2U40_RS04325 NONE
C2U40_RS04320 NONE
C2U40_RS04315 NONE
C2U40_RS04310 NONE
C2U40_RS04305  906670 ..  906703 - -13.9  -3.63922   ATTCCCCTCAAAAGA     CGCTGCCCACCAG TATGCAAG CTGGTGGGCAGAG      TTTAAATAGCGCTCT 100 55
C2U40_RS04300  905938 ..  905982 -  -2.5  -3.24747   GCCGGAGAGCAGGAA GCGGCGGATGGAGCGGGGACG CGT CATGCCCGGTGATCCCGGCGC TGGGCCTGTTCAAGC  43 4
C2U40_RS04295  904490 ..  904507 - -12.7  -3.69338   AACCAATGTGAACAA             CGCCTCC GATG GGAGGCG              TTTTCGTTTCTGTGT  88 40
C2U40_RS04275  900369 ..  900392 - -11.7  -5.76633   CCAGATACAAAAAAA          CCGGTGCGC AGGGTA GCACACCGG           TTGGCTGGCTTCTAA 100 176
        earP  899129 ..  899145 -  -2.9  -2.74094   GGGCAGATAAAAACT              GCCAGAT TAT ATACGGC              TTTCTAAAAATTTCA  41 15
         efp  898480 ..  898496 - -13.7  -5.64274   GCACCCATAAAAAAA              GCGAGCC AAA GGCTCGC              TTTTTCACCATGGAT 100 54
C2U40_RS04255  897684 ..  897735 -  -3.6  -4.03888   CAGTGATAAGAACAA TCTGGCCATAGTG-CGCTCCCCCG GTTATT CGGGTTAGCGGCACCA-GGCCGGT TTTCTGAAGGGGGAA  60 49
C2U40_RS04250  896861 ..  896871 -  -6.8  -3.39018   TCATGATGCCAAACA                 TCGG CGA CCGA                 GGGCCAGTTTGCTGC  59 94
C2U40_RS04245  895821 ..  895844 - -18.2  -2.79098   CGCAGCCAGCAATGA          GAGAGGGGCC GACA GGCCCCTCTC           TTGTTTGGGTCGGCA 100 47
C2U40_RS04230  892641 ..  892659 - -13.1  -5.18726   GCCTGACAACAAAAA             GCCCCCG TCGAG CGGGGGC             TTGGATGGTGGGCGA 100 46
C2U40_RS04215  890599 ..  890613 -  -5.6  -3.61398   GCTGGGGGGCAAGAA               TCGCTG CCA CAGCGT               CAGCTGCAGCGCGCT  57 125
C2U40_RS04190 NONE
C2U40_RS04185 NONE
C2U40_RS04180  883696 ..  883731 -  -7.5  -2.62184   GTTGTGGCTATATGA    GGATGGGCGTCGGCT GTTTCA AGACGATGACCATCC     GGTTCTTTACTCTTC  56 32
C2U40_RS04175  882712 ..  882744 - -19.2  -3.53012   GGGCGTGCGGCCAAA      CGAACAGCGCCCCG ACGGG CGGGGCGCTGTTGG      CAAGGGTCAAGGCTT 100 39
C2U40_RS04170  880958 ..  880977 -   -15  -5.72207   GCCAAACCAAAAAAA            GAGGCGCC CAAG GGCGCCTC             TCCTCATTTATCGGG 100 54
        leuS  877615 ..  877637 - -11.9  -3.16676   TGCATGAAGTGAAGA           GCGGCGGGC GCAGG GCCCGCCGT           TATCATCCGTTTGCT  77 92
C2U40_RS04155 NONE
C2U40_RS04150  876927 ..  876937 -  -3.2  -3.59979   GTTGTTCAGGGTAAA                 TCCG CAT CAGA                 ACCTGGCCTGGTTGA  51 21
        holA NONE
C2U40_RS04140  875131 ..  875161 -  -8.8   -3.0634   AAGGGGAGTGGAACA       GGGGCCGTGCCCGC TTG GCAAACTCGCCCCC       TGTTGATCACTATAG  62 81
        rsfS NONE
C2U40_RS04130 NONE
        mrdA NONE
C2U40_RS04120  871064 ..  871090 -  -2.1  -2.89563   GAGAGAGCAGCAAAC         CGGCCAGTCGC ATCAG GCGAGCAGCCT         TCTGTGGGTCTGGAT  41 11
        mltB NONE
C2U40_RS04110  869073 ..  869091 -  -6.6  -3.53444   CGACCGTCGGTCAAA             GCCCGACG TGC CATCTGGC             CTGGTTTTTTATCCA  61 120
C2U40_RS04105  867754 ..  867779 - -16.1  -3.41366   CGACCGCAAAAGACA         GCAGCGGCGCC TGTT GGCGCCGCTGT          TTGGTCAGGTTTGTG 100 47
C2U40_RS04100  867211 ..  867238 - -11.2  -3.90744   CCGGCTGGCAAATAA        TCAGTCGCCCCG GTGG CGGGGCGAGAGA         GGCGACTTACAGGAC  86 32
C2U40_RS04095 NONE
C2U40_RS04090 NONE
        lipA  865352 ..  865369 - -12.7  -5.24129   CCGGCCCATAAAAAA             GAGCGCC CAGG GGCGCTC              TTTTTTGACCAGGGG 100 49
C2U40_RS04080  864674 ..  864694 -  -8.9  -2.66316   GGCCTCATCATATCA            GCGCCAGCC GGG GGGTGGCAC            GCCCCTGTCCGGGTA  59 63
C2U40_RS04075 NONE
        mscL  857598 ..  857611 -  -9.5  -5.45652   ACCGGCAACAAAAAA               CCGCC AGAA GGCGG                TTTTTTTCAAATACA 100 57
C2U40_RS04030  855761 ..  855774 -  -3.7  -5.32882   GACCAGCACAAAAAA               GTCGC TATA GCGTC                ATGCGATGATACCGA  86 229
C2U40_RS04025 NONE
C2U40_RS04020  852714 ..  852733 - -16.4   -5.1287   GCCAGAGCTAAAAAA            GCGGCGCC TGAT GGCGCCGC             TTTCGGGTGGGGAAC 100 217
C2U40_RS04015  852156 ..  852181 - -19.1  -2.54702   AGACAGGCTAATGCA         CAACGGCGACC ATGA GGTCGCCGTTG          TTGTTTCTGGCACAG 100 51
C2U40_RS03985  844846 ..  844863 - -14.1  -4.46615   GACGACCAATGAAAA             CGGGGCC TGCG GGCCCCG              TTGCTTGTCTGCTCT 100 50
C2U40_RS03965 NONE
C2U40_RS03960  836891 ..  836915 -  -6.3  -3.80573   CGGAGTATTAGCAAA          CCCCGATTTGC GCT GCAAGCCGCGG          GCGCCGGAATAGCGC  63 171
C2U40_RS03955 NONE
C2U40_RS03950 NONE
C2U40_RS03945  832348 ..  832371 - -16.8  -3.12999   TGACCGCAGATGCAA          CAAACCCCGG CATG CCGGGGTTTG           TTGTTGCAGCGGATG 100 43
C2U40_RS03940  831422 ..  831441 -   -10  -5.03314   TTCATTGCGAAAAAA            GGGGCGACA TCC TG-CGCCCC            TGTGGGTTTTCAACC 100 53
        fumC  829948 ..  829969 - -11.6   -5.1675   TCATTGATGAAAAAA           GAAGCCGG CGCAGT CCGGCTTC            TTTTTTATCTCGTGT 100 57
C2U40_RS03925  828978 ..  829010 - -11.4  -2.73007   AACAGGTTTTCAAAT     GGCGCAGG-ATTGTT GCAG ATCAATGCCTGCGCC      CGGTTCTCGCACTGC  73 40
C2U40_RS03920 NONE
        yhbY  809210 ..  809230 - -14.1  -3.54146   AAGAGGGGAAATGAA            GGAAAGAGC GAT GCTCTTTCC            TGTTACTTGCGGGGC  95 28
C2U40_RS03825  808506 ..  808527 - -15.9  -3.50393   GTGGATGCCAGAGAA           CAGGGGAGC CCCG GCTCCCCTG            TTTGTATTTAGCGGG 100 33
C2U40_RS03805 NONE
C2U40_RS03800 NONE
C2U40_RS03795  802898 ..  802916 - -13.8   -5.4433   ACAGACAAACAAAAA             GGGCGCCA TAA CGGCGCCC             TTTTGCTGTGTGCTG 100 47
C2U40_RS03750  793140 ..  793159 - -12.2   -3.4617   ATGAATATGAAGTAA            GGGATGAC ATCG GTCATCCC             TTGTTGTTTTGCCTC  86 39
C2U40_RS03710  785958 ..  785974 -  -9.3  -4.60255   ACAAGTCGGGAAAAA              CGCCGCC AGA GGCGGCC              TTTTCAGGGCATGTC  91 51
C2U40_RS03705 NONE
C2U40_RS03700 NONE
C2U40_RS03695 NONE
C2U40_RS03690  782870 ..  782888 - -13.1  -3.10344   TCTGGAGGGAAGAGA             GGGGGCG TCATT CGCCCCC             TTTTTGCGGTGTTAC  83 37
C2U40_RS03685  780214 ..  780230 -  -2.2  -5.47159   CTCGAAGAGAAAAAA              TCCTCC TATCC GCAGGA              CGCGTTGCTGGAAGA  90 139
         acs  777840 ..  777864 - -15.8  -2.88215   CAGTAGCAAAGACGA          CAAAGCCGGC TTGAG GCCGGCTTTG          GAGGCAGGAACGCAG  95 47
        aroQ NONE
C2U40_RS03665 NONE
        accC  775238 ..  775257 - -13.6  -5.59534   AAGGATAACAAAAAA            GGGCCATG TCGC CATGGCCC             TTTTTCAACAGAGGC 100 90
C2U40_RS03655 NONE
C2U40_RS03650  773433 ..  773443 -  -6.8  -3.65542   TTTACCCGTAAAACA                 CCCA TTT TGGG                 ATAGTTTCGGAACCC  63 45
C2U40_RS03645  771732 ..  771756 -  -5.5  -3.13403   CTTGTCTGAGCAACA          GCCTGCTGGCG CTG CGGGAGCTGGC          CATCAACGAGGGGGG  51 227
C2U40_RS03635  769758 ..  769772 -  -2.8  -3.36991   CACTAGCTGCAAAGA               TACAGA GGT CCTGCA               TAAGGATATGTGTGT  47 219
C2U40_RS03630 NONE
C2U40_RS03625  767201 ..  767231 - -17.7  -4.37886   CTAGTGGGCAGAAAA      CAGACGGGGCTCCC ATGT GGGAGCCCCGT-TG       GCAACGGCTGTGTCG 100 46
C2U40_RS03615 NONE
        sppA  761000 ..  761013 -  -9.5  -6.22802   TCCCATAAAAAAAAA               CCGCC CTAG GGCGG                TTTTTTGCGTTGGCT 100 46
C2U40_RS03585  757976 ..  757998 -  -3.3  -2.53164   TGAGCCATGACGAAT           CGGGATCAG GCCGG CAGATCCTG           GCGAACCGCGCCAGC  40 8
C2U40_RS03580  757584 ..  757608 - -20.1  -5.25893   ATAGATAGGAAAAAA          GAGGGGAGCCA TCA TGGCTCCCCTC          TCTGCTGTGGCCACC 100 64
        gltS  754620 ..  754649 - -12.1  -4.46212   CTCGCGAGCAGAAAA       GGCAGAGCCCACC AAGG GGTGGGCTCTGTT        CATAGACGTCTGACG 100 50
C2U40_RS03560 NONE
        lysS  749635 ..  749654 - -16.4  -5.24129   GCCTGCCATAAAAAA            CGCCCCGC AGTG GCGGGGCG             TTTTGATTGTCATGG 100 79
C2U40_RS03545 NONE
C2U40_RS03540 NONE
C2U40_RS03535  744219 ..  744238 - -16.4  -5.27335   TTGCGCAAAGAAAAA            CGCCCGGC AGTT GCCGGGCG             TTTTTTATGGGAGCC 100 61
C2U40_RS03495  736907 ..  736927 - -15.4  -4.14764   CCGCAAATAAGCAAA            GGGCGGGG CAAAT CCCCGCCC            AGCTTTTATTTCTTC 100 31
C2U40_RS03400 NONE
C2U40_RS03395 NONE
C2U40_RS03390  719185 ..  719202 - -12.7  -4.32034   TGAGCACCATGAAAA             CAGGGGC CGCG GCCCCTG              TTTTCATTTGCTCAG 100 29
C2U40_RS03375  715956 ..  715973 - -12.7   -5.7946   GTTGCAACAAAAAAA             GAGGGCC CGTG GGCCCTC              TTTTTTTCATCTCGG 100 62
C2U40_RS03360  713196 ..  713206 -  -8.2  -3.90112   CCCCTGGCAACTAAA                 GCGC CCT GCGC                 CGAGGGCTGGTTACC  74 59
C2U40_RS03350  711793 ..  711810 - -12.7  -4.79451   AGCCCAAATATAAAA             GGCCAGC GAAT GCTGGCC              TTTTGCAGTGAGTCT 100 51
C2U40_RS03310  703633 ..  703653 - -12.6  -5.48825   GAGCAGGCAAAAAAA            TACCCCGC ACCTG GCGGGGTA            TGTGGTGTGGCCGGT 100 59
C2U40_RS03305  703070 ..  703087 - -12.7  -5.49234   ACAGCGAATAAAAAA             TGGGGCC TGCG GGCCCCA              TCTTCATGGTTGGAG 100 181
C2U40_RS03275  693630 ..  693649 - -16.4  -3.53811   TGGACGTTGGGCAAA            GCCGGCCC GACC GGGCCGGC             TTGGGTTTATATCTC 100 53
C2U40_RS03270 NONE
C2U40_RS03265  691416 ..  691427 -  -2.2  -3.56727   TTCAATCAACCAGAA                CCAC ATGG GTGA                 CTCCTTACGCTGCGG  49 30
C2U40_RS03260 NONE
C2U40_RS03255 NONE
C2U40_RS03250 NONE
C2U40_RS03245  688367 ..  688386 - -11.4  -5.38047   CAGGGACATAAAAAA            GACCGCTC CGGG GAGCGGCC             AATTGCCACCAAGGC 100 159
C2U40_RS03235  682524 ..  682541 - -12.7  -5.24129   CCGGCCCATAAAAAA             GCCCGCA TCGC TGCGGGC              TTTTGGTTTGATGGC 100 50
C2U40_RS03195  677673 ..  677698 - -14.7  -2.75844   GTGCCTATGGTAAAC         GGACTCGCCCC CGAG GGGGAGAGTCC          TGAGGTGGAAAATTA  90 41
C2U40_RS03190  676921 ..  676941 -   -14  -5.44119   TTCAGGTCAAAAAAA            CGGGAGGC ACCAG GCCTCCCG            TTGTTTCATTCCTTG 100 31
C2U40_RS03185  676423 ..  676446 - -11.8  -5.41143   CAGCGGGCAAAAAAA          TAGGAGG-GCC GAT GGCTCCTCCTA          CAGGCTCACTGGCGT 100 44
C2U40_RS03140 NONE
         psd NONE
C2U40_RS03130 NONE
C2U40_RS03125 NONE
C2U40_RS03120  671848 ..  671872 - -21.5  -5.11033   GATAACCGCAAAAAA          CAACCCCCGGC AGT GCCGGGGGTTG          AATAGATACGGGTGG 100 42
C2U40_RS03110  669068 ..  669097 - -20.9  -4.57073   CACGCGTTGCAAAAA       CAACAAGGCCACC CTCG GGTGGCCTTGTTG        TTGCTGGCTTATTGC 100 34
C2U40_RS03095  665954 ..  665970 - -15.1  -5.39721   TCAGCAGATAAAAAA              GGGGGCC TGA GGCCCCC              TGGTCACAACTGTGG 100 47
C2U40_RS03090  662998 ..  663023 - -16.2  -3.70149   TTTAGATGATGTAAA         CCCCCTAGCC TTGGTT GGCTAGGGGG          GTCCGTTCGTGGTTA 100 404
C2U40_RS03075 NONE
C2U40_RS03070 NONE
C2U40_RS03065 NONE
C2U40_RS03060  659952 ..  659963 -  -7.2  -3.09327   TGAGCTGATGCAACA                GGGC ATAA GCCC                 CCTTCACAGTGGAAA  56 471
C2U40_RS03055  658414 ..  658449 -   -14  -3.69338   AAGCAAGGGGAATAA    CCGTGTCGCGGATTAT CCAA ACAGGCCGCGACACGG     CGTGACGAATTGGAT 100 253
C2U40_RS03050  657424 ..  657446 -  -9.1   -3.4268   CGACAATGTGAAACA           GCGGCGACA GGTGG TGTCGCGGC           ATGTCAGGCGCTGTC  71 78
C2U40_RS03045  657094 ..  657114 - -11.1  -5.41746   AACGGTCCAAAAAAA            GAGGCCAGT AGA ACTGGCCGC            TTTGTCGTTACGAGC 100 104
C2U40_RS03030 NONE
C2U40_RS03025  652443 ..  652461 -   -16  -5.38497   ACCGAAATGAAAAAA             GCCCGCTC GAT GAGCGGGC             TTTTAAAATTTGGCT 100 36
C2U40_RS03015 NONE
C2U40_RS03010  647092 ..  647117 - -19.1  -3.33696   GCTCTCCTCAAGCAA         CAAGGGCTGCC CGCG GGCAGCCCTTG          TCATTTTCGGCCCTC 100 39
C2U40_RS02975  640540 ..  640560 - -12.6  -5.35222   AAAATCGATAAAAAA            GGGCAGGT TTGGC ACCTGCCC            GAATTTTATCGGTCG 100 79
C2U40_RS02970  639207 ..  639226 - -13.6  -5.60993   TCGCGCATAAAAAAA            CCAGCGAC CGAG GTCGCTGG             TTTTTTTTTCGTCCA 100 49
C2U40_RS02960  636387 ..  636417 - -25.6  -3.31322   CGCAAGGCGCCATAA       CAATCAGCCCGGCC AAT GGCCGGGCTGATTG       TTATCCGGTTGGCTG 100 51
C2U40_RS02945  632418 ..  632445 - -11.4   -3.3062   CTGAAACAGGAGCAA        TAAACATCCCGC CTTG GCGGGATTTTTA         TTGGGGTTGGAACCC  80 70
C2U40_RS02920  610979 ..  610996 -  -4.9  -2.79492   TGGGCAACGGCAAAT             GAATAAG ACCG CTCATTC              GCCAGCCAGTTCCTC  46 39
C2U40_RS02915 NONE
C2U40_RS02910  609975 ..  610005 - -17.6   -4.9725   ATCGGGATAGAAAAA       GGCCGGACTGGC GTGAACT GCCAGCCCGGCC       TTTTTTATTTCGCTA 100 52
C2U40_RS02900  608646 ..  608668 - -13.4  -5.09204   ATACCCGAAGAAAAA           TAGGGCAGCC ACA GGCTGCCCTT           ATGATGGAAGGGGTA 100 49
        galU  607631 ..  607648 - -11.3   -5.1417   TTATAAAATGAAAAA             GGGCATC GAAT GATGCCC              AGTGTTTTATTCCAT 100 63
C2U40_RS02890  606024 ..  606054 - -25.6  -2.89191   TCAGACGGCCACATA       CAAAGAGGGCGCCC AAT GGGCGCCCTCTTTG       TTGCTGACAATCTTG 100 46
C2U40_RS02880 NONE
C2U40_RS02875  603051 ..  603084 - -10.3  -3.28785   CTGGAAAAGAGGGAA     GCG-GCGAGCCAGG GGGGGGG CCTGGCTCGCACGG     GGATCAGCCGTTGTA  72 29
C2U40_RS02870  602263 ..  602286 - -18.2  -4.35524   GCGGTAAAGCGAAAA          GCGGTCAGCC CTTG GGCTGACCGC           TTTTGTATGCGCTGG 100 63
C2U40_RS02845 NONE
C2U40_RS02840  595488 ..  595530 - -13.7  -3.73647   TGCACTGACCAACAA CATAGATAGCAAGAGAGGGCC ATT GGCCCTCTCTTGC-AT-TAGG CAACATGGGGAGGAT 100 206
C2U40_RS02835  593576 ..  593602 - -19.6  -4.11692   CACCTATTTCGAAAA         CAAGAGAGAGCC AAT GGCTCTCTCTTG         TTTTGGGTAGCTTGA 100 152
C2U40_RS02780  584159 ..  584203 -  -6.4  -2.89447   GCGCAAGTACAAGTA CCCGCCAG-ACCAGCAG-GAAG AGG CTGCTCAGCTGGTTCTGGCGCA GGCAGAGAGCTTGTG  52 111
C2U40_RS02770 NONE
C2U40_RS02765  580946 ..  580977 -  -2.2    -5.093   CCCAAAAGAAGAAAA      CCGACGAAGAGC GCGACTTG GCCATTCGCCAG       ATCATCGGCAATGCG  74 475
C2U40_RS02650  563468 ..  563478 -  -6.8  -3.60475   AATAAATTGGGTAAA                 GGTG CTA CACC                 GATACCCGGTGCGCC  63 46
C2U40_RS02620 NONE
C2U40_RS02615  558800 ..  558814 -  -4.2  -3.04517   ATCCGTGCGTAAAAG               CCTTCT ATC AGACGG               TGAGCGTGTCTGACT  46 90
C2U40_RS02610  557044 ..  557065 -  -9.4  -2.61199   GAATGCCTAACTAAT           GGGCCACC AAGAAG AGTGGCCC            TATTTATTACCGTGA  62 429
C2U40_RS02585  551472 ..  551490 - -14.6  -2.77135   GTGGATAAATAAGAG             GGTGGCCT ATT AGGCCACC             TATATTTAGTGTGAA  90 31
C2U40_RS02525  537691 ..  537710 -  -9.2  -3.40403   TGTCTCGCATCAGAA            GGTGGGGG CAAG CCCCCATC             AGTTATGAGTAACCA  69 97
C2U40_RS02520  536956 ..  536978 - -14.9  -4.87291   GACCCTAACGAAAAA           GCCCCCATC CAGTC GATGGGGGC           TTTTTTATGTCTGCG 100 63
C2U40_RS02490  530412 ..  530436 -  -5.8  -3.61398   CTGGCTGCGCAACAA         GCTGGCCGA-CA AGC TGATCGGC-AGC         AACCAGTTCAAGATG  57 184
        aspA  528125 ..  528167 - -13.5  -4.37886   TTATTTGGCAGAAAA GCCAATTCCCGATGGGGCT GGGCA AGACCTATCGGGAACTGAC TTTATGGGCCGGGAT 100 62
C2U40_RS02475  526712 ..  526728 - -10.8  -5.17576   GATGAACCTAAAAAA              CGGCCC GAACA GGGCCG              TTTGCGTGTTTGTGG 100 54
C2U40_RS02465  524109 ..  524127 - -17.4  -5.45652   ACGGGCAATAAAAAA             CCGGCCGC TGG GCGGCCGG             TAAAAAATACAGTAG 100 57
C2U40_RS02455  521766 ..  521791 -  -8.9  -2.51089   ACTGCAAATAGAGAG         GGAGCGCCGGA CTTG TCCGGCGCTTT          TTTTATGCGGATTTG  58 28
C2U40_RS02445 NONE
C2U40_RS02440  518511 ..  518526 -  -7.5  -3.65812   TCGCCGGCAAGAGAA              CCGGC TAGAGC GCCGG               GTTGAGGCGCGCGGT  66 14
C2U40_RS02435  517122 ..  517147 - -20.5  -3.65224   ACCTCATCTGAAGAA         CGGGCCCGAAG GCAA CTTCGGGCCCG          TTTTTTTTGGTTCAT 100 37
C2U40_RS02415  513354 ..  513372 - -13.8  -3.90112   GCGCCGCGAACGAAA             CGGGGGCC GAC GGCCCCCA             TTGTAGATGACAACG 100 58
C2U40_RS02410  512040 ..  512068 - -23.3  -3.10975   AGGCATCAGCTAACA        CAATCAGGGCGCC AAT GGCGCCCTGATTG        TTTCTCTATTCGTTG 100 82
        purH  508671 ..  508689 - -17.4  -4.91357   AAAGAGACAACAAAA             GGGCCGCC GGC GGCGGCCC             TGATCCATCAGTGAC 100 33
C2U40_RS02385  507275 ..  507290 - -11.8   -3.3353   CGCCGGATAAAGAGA              GGGCCC TTGC GGGCCC               TGTTGATTACTGCTG  80 32
C2U40_RS02380 NONE
C2U40_RS02375  506098 ..  506115 - -14.1  -3.28487   GCAGAGCAATGAACA             GGGGCCC AGCA GGGCCCC              ATGAGTATTCAGGCG  95 34
C2U40_RS02370  503205 ..  503229 - -17.9  -5.54192   ATGAACCTAAAAAAA          GGCCTCCCACC GAT GGTGGGAAGCC          TGGTTCAGTGCTTCA 100 68
        tsaD  495372 ..  495398 - -13.8  -4.45544   GCTTACCAAGCAAAA         CAAAAAGGGGCC AAA GGCCCCTTTTTC         ATGTCTGCAGGATCC 100 47
C2U40_RS02260  477845 ..  477857 -  -4.7  -4.82901   CCCGCGTCAGAAAAA                GCGGG TTG CCCGG                TTCAGGATAGATAGC  75 27
C2U40_RS02255 NONE
C2U40_RS02250  476340 ..  476361 - -15.9  -3.72453   ACGAAGAATGTGAAA           GAGGGACGC CGCG GCGTCCCTC            TTTCGTGGTCGGGGG 100 47
C2U40_RS02240  473938 ..  473951 -  -5.2    -3.494   CAACTCCTTATACAA               CCGG GGTCAG CCGG                GAGTGGCTGGCGGGG  56 4
C2U40_RS02235 NONE
C2U40_RS02230  472250 ..  472261 -    -3  -3.08812   GCCCTTGCAACAAAC                TGAT TTCC ATCA                 CAATTGTCCTTAATC  43 39
C2U40_RS02225 NONE
C2U40_RS02220 NONE
C2U40_RS02215 NONE
        nagA NONE
C2U40_RS02205 NONE
C2U40_RS02200  466031 ..  466048 - -12.7   -4.4891   GGCACGAGGAGAAAA             GGGACGC CACG GCGTCCC              TTTTTGTCAGGTCAA 100 53
C2U40_RS02145  455365 ..  455394 - -18.7  -4.36914   CTCTTCCCCATAAAA       CAGATGACCCCGC CGGA GCGAGGTCATCTG        GGGGATGCGGATCGA 100 87
C2U40_RS02130  453623 ..  453654 -   -10  -2.70932   GCGCTGGCTGAAGGA      GGCCCTGCTGGCGC GGGC GCGCTAGCAGGTCT       CTTCGCTTACTCGGT  67 32
C2U40_RS02120  452106 ..  452125 -  -4.2  -3.42354   GAGCTGAAGGCACAA            GCCTGAACG CCG CGG-CAGGC            CCGCCGGGCTTGTCC  51 107
C2U40_RS02110 NONE
C2U40_RS02105  449455 ..  449487 -   -17  -3.55203   AAAATGGCGGTCAAA     CCGGG-GGCCCGCAC GGTT GCACGGGCCACCCGG      CATCAGCGCAGCTTG 100 28
C2U40_RS02100  448507 ..  448547 -  -6.9  -2.78384   TGGGGCGGCATGATA GGCATAGGGGCCAA-CCGG CTACC CCAGATCGGCCGCT-TGCC GGAGCAGCCCAACGT  49 430
C2U40_RS02045  434114 ..  434137 - -14.6  -5.14563   GCCGCGATGAAAAAA          GAAAGGCCCC TCAT GGGGCCTTCC           AGTCTAACCAGATTA 100 52
C2U40_RS02040  433632 ..  433642 -  -2.4  -2.71011   ATCCGGCGGGAATTA                 TCGG CAG CCGG                 CCATTCAGGTGCGCT  39 30
C2U40_RS02035  430619 ..  430636 - -14.1   -3.9679   TAATAGATACAACAA             GGGGCGC CTCG GCGCCCC              TTCGGTTTATTCCCC 100 32
C2U40_RS02015  426765 ..  426780 - -11.8  -2.64933   CATTCACTGACATCA              GGGCCC TGCG GGGCCC               TTTTCGTTGCCGCGC  73 7
C2U40_RS02005  423131 ..  423158 -    -4  -3.70438   AAAGGACCAGTCAAA        GCTCATGCCGGGA TCC TCCCGTCGCG-GC        GCAGCCGCTGGGGCA  53 0
C2U40_RS02000  422450 ..  422462 -  -3.3  -2.79183   TGCACTGCCATCAGA                CGCCA CAC TGGCT                CAGGCAACTCAGTGA  41 34
C2U40_RS01995 NONE
C2U40_RS01990 NONE
C2U40_RS01985  420026 ..  420047 - -10.1  -5.44119   CCCATGCGAAAAAAA           GGCGCCACCC GAG GGG-GACGCC           TGAAAGGTCAAACCT 100 106
C2U40_RS01970  415803 ..  415832 -  -5.7  -2.64735   ACGCCACCCACAGCA       GCTGGCTCATCAT GATG ATGGTGAACCAGA        AGCCGAACAGGATCT  47 65
C2U40_RS01965 NONE
C2U40_RS01910  405176 ..  405193 - -14.1  -3.43492   TTACAGTCATGACAA             CGGGCGC CTTG GCGCCCG              TTGTGGATCCTGGCA  95 51
C2U40_RS01905  404735 ..  404750 - -11.8  -3.31792   TCATGATCTCGACAA              GGGCGC TGCG GCGCCC               TTTTCATGGCCGGTC  80 55
C2U40_RS01890  399465 ..  399480 -  -2.4  -2.73771   TCACACTCTGCAAAG              CGGCGC CCTG GCACTG               GCGCTTTGCATGTTG  39 475
C2U40_RS01880  397419 ..  397438 -  -4.9  -4.15044   TTCGCTGCGAAGAAA            GTGCCCC GAATGG GGGGCAG             GCCAGTTCAATAACT  64 85
C2U40_RS01875 NONE
C2U40_RS01870 NONE
C2U40_RS01865  395625 ..  395640 - -10.4   -5.4505   GGTGGCAACAAAAAA              GAGGGC CTAA GCCCTC               TTTGATCTCTGAATA 100 51
C2U40_RS01860 NONE
C2U40_RS01855  393519 ..  393548 - -16.7  -4.62069   CGGTTAGCCGAAAAA       TAAAAAAACGCCC GTGC GGGCGTTTTTTTA        TTTGGGGATTAACGG 100 34
C2U40_RS01840  388523 ..  388550 -  -7.6  -4.61852   AAGATCACAAAGAAA        TGGCCCCG-CCAC CGA GCGGGCAGGGCCG        TCATCCATATTCACG  84 48
C2U40_RS01835  387946 ..  387968 -  -8.4  -3.34988   TCAGGCACAAAGAGA           GAAGGAGGCA TCA TGTCTCCCTC           TTTTTTCGTCCAGTT  65 56
C2U40_RS01820  383706 ..  383719 -  -3.7  -3.32647   CTTTAACCAGATCAA               CGCCG GTTG CTGCG                CATGGTGCTTTGGTA  49 95
C2U40_RS01815 NONE
C2U40_RS01810  382815 ..  382844 - -20.9  -3.85698   TGCGCCGCCCAGAAA       CAACCATGGCTCC CGCG GGAGCCATGGTTG        TTTCTGGGGAGGTCA 100 112
C2U40_RS01800  380925 ..  380942 -  -9.8  -5.24531   AGCGGGCACAAAAAA             GGGCCC GGGAGG GGGCCC              AAACATTGGAAACCC 100 90
C2U40_RS01795  379818 ..  379847 - -17.3  -3.71873   TGAGCGACAGGCAAA       CAAAAGGGCGGCA TCGC TGCCGCCCTTTTA        TCCTGAGCTGATCAC 100 41
C2U40_RS01785  378561 ..  378579 - -12.4  -3.62046   GCATCGCTTCAACAA             CCCTGCCC TGC GGGCAGAG             CTGCTGTCGAGAACC  75 236
C2U40_RS01775  376815 ..  376830 -  -2.4  -4.38219   ACAAGATAAAAAAGA              CCCCGC CCAG GCGGTA               ATGCCAGTCAGTTAA  60 37
C2U40_RS01745  367819 ..  367848 -  -6.3  -3.13022   GAACGAAGAGAGATA       GAGGGGCCTGGAGC TCA GC-CGAGGCGCCCC       TTGAGCTGCTGCCAC  54 10
        rimI  367066 ..  367083 -  -8.4  -2.95298   GGTAGCGAGCACATA             CTGCGG CGCTTC CCGCAG              GTGGCGACCCCGCCC  55 273
C2U40_RS01730  364710 ..  364726 - -10.1   -4.8269   GACAACCAGCAAAAA              GCCGCTC TTG AAGCGGC              TTTTTTATTTCCCTG 100 70
C2U40_RS01700  356792 ..  356824 -    -7  -2.80935   AGGCCAGGGAGCAGA     CCCTGGCCCGCCA GGCTGAGG TGGC-GGCCATGG      TGCCCGCCGTGGTGG  49 296
C2U40_RS01690  355378 ..  355399 - -15.9  -2.58714   TGGTAGAGGAATGGA           CACAGGGGC CTCG GCCCCTGTG            TCAGGGTAACGGGGA  95 47
C2U40_RS01665  351864 ..  351905 - -12.3  -2.78438   CAGCATACGCCAAAG CGCAGGTCGGCTCATTAAC CTCG GTTAACGAGCCGGCCTTGG  GAGTGGATGGTGGGC  77 40
C2U40_RS01660  350950 ..  350960 -  -2.4  -2.52543   AGGCGGCTTAAGGCA                 TCCG GGC CGGT                 CGGTCAGGGAGTGAC  38 29
C2U40_RS01620  342170 ..  342207 - -16.5  -3.60098   ACCCGGGATGGCAAA   CATG-AAAAAGGCCGGTC AAT GACCGGCCTTTTTGCGTG   CTGACGGAATCAGGA 100 35
C2U40_RS01575  333767 ..  333806 - -10.7  -3.25102   ATCCCAGTTACAACA  GCTAC-ATGGCCTCTGCC AAGCG GGCAGAGGCCAAGGCCGC  CCTGCTGGAGGCGGC  67 304
C2U40_RS01510  319622 ..  319637 -  -7.5   -5.7827   AACAGAAATAAAAAA              CCGGC ACGAAG GCCGG               TTTTTTTAGCTTTGT 100 56
C2U40_RS01465  311510 ..  311534 -  -6.6  -2.87132   GCGCTGTTGCACACA         GTTATCCACAG AAAT CT-TGGATAAC          TGCCGGCAAGTGCTA  54 56
C2U40_RS01460  310557 ..  310569 -  -3.4  -4.16842   CTGATTGCGAAGAAA                TAGC TGCTG GCTA                TTTTTATATCACTTT  60 66
C2U40_RS01455  310149 ..  310167 -   -16  -4.20531   GACAGGTAGTGAAAA             GGCTCGCC AAT GGCGAGCC             TTTTTTGTATCCGCT 100 56
C2U40_RS01425 NONE
C2U40_RS01420  304156 ..  304172 - -13.7   -5.5112   GTGAGCAAGAAAAAA              GGCTGCC AGT GGCAGCC              TTTTTTCAATCTTCA 100 31
C2U40_RS01410  302280 ..  302307 -   -12  -5.47821   ACTGAGCCAAAAAAA        TGACCCACGGAT CTGC ATCCGTGGGCCG         GGAGGAGCCGGCCGC 100 90
C2U40_RS01375  296523 ..  296540 - -12.7  -5.24796   CGCAGATAACAAAAA             TCCCGGC CTTG GCCGGGA              TTTTGCGTGTTGGCG 100 67
C2U40_RS01345  290501 ..  290515 -  -2.8  -4.56597   GCGCTGTCGCAAAAA               CTGAAT TTC ATTCTG               TCATCCTCGGGCGTT  65 55
C2U40_RS01340  289756 ..  289772 - -13.7  -5.75342   TGCCGGCAAAAAAAA              GCGCCTC AGG GAGGCGC              GGGGAAAAAGACAGA 100 270
C2U40_RS01300  281535 ..  281552 -  -5.5  -3.05384   CTGTTGGTTAGGCAA             TGGGGCA TGGT TGCCCGA              TGTCGTTTTTCAGAG  50 48
C2U40_RS01295  281177 ..  281193 - -13.7  -5.60993   GCGGCCATAAAAAAA              CCGGAGC TGG GCTCCGG              TTTTGACAAGGGTGA 100 50
C2U40_RS01290  280122 ..  280146 -  -3.5  -3.40597   TCGCTTAGCTAAATA          GTGCAAATGAA AGG TGCATCTGCGC          AGGCGGATGGCAAAG  49 103
C2U40_RS01285  278382 ..  278424 -  -8.3  -3.30124   CGGGAGGGGGTAGAA CGAGGTGAAGCGGGCGTGCC GGGC GGCACGCCC-CTGCAAGGCG GTCAGTGCTGGAACT  65 27
C2U40_RS01280 NONE
C2U40_RS01275  275866 ..  275876 -  -4.6  -3.21099   CCTCGCCATGACCAA                 CGAC GAT GCCG                 AATACCTCGACGAGA  48 269
C2U40_RS01260  272100 ..  272126 - -25.2  -3.83568   GCAGACTGACAATAA         TCCCGCCGGGGC ATG GCCCCGGCGGGA         TTTTTTTATGGGTGG 100 47
C2U40_RS01250  268909 ..  268927 - -13.1  -5.10461   GCGAGGCAATAAAAA             GCCGCCC ACTGG GGGCGGC             TGTTGGTTGTGCCGT 100 52
C2U40_RS01240  263995 ..  264022 - -15.6  -3.01712   TGGCCGCCCGCAACA        GCAGGAAGGGGC CAAG GCCCCTTCCTGT         TTTTCTGTCTCAGTG  95 35
C2U40_RS01230  262594 ..  262622 -    -3  -2.76261   GCTCAAGTCTGAAAG       GGGTGTGAGCTGG CGGG CCGACGC-CACCC        AGCCGTCAACGGGAT  41 74
C2U40_RS01225  261279 ..  261296 - -14.1  -5.38054   CGGGACAAACAAAAA             GCCCCGC CTGA GCGGGGC              TTGCGGGGATCAGCC 100 35
C2U40_RS01220  260209 ..  260262 -  -3.7  -4.29508   ATCTACACCAAGAAA CCCTGACACCCACCATGCCCGGC-CA GCG TGTGCCGGGCATGGTCGTCCTCATCC TAGCTCGCGGGCCAG  62 20
C2U40_RS01185  252002 ..  252025 - -17.4  -2.62184   CTGTCTGTCAGAGGA          GCCGACCGGG CAAG CCCGGCCGGC           TCCTTATTTTGCAGG 100 47
C2U40_RS01170 NONE
C2U40_RS01165  247250 ..  247266 -  -6.5  -3.16881   GACGGAGCCGACCAA              GGTGCAG GCT CTGCAGC              GGGCCCTCGACCAGA  53 149
C2U40_RS01150  242615 ..  242643 - -26.1  -3.83844   TTCATCAATGAAGAA        CGCCCCCGTCAGC CGG GCTGACGGGGGCG        TGCGCTGCGACAGGG 100 50
C2U40_RS01145  240772 ..  240802 - -18.4  -2.78463   AGGTGGTGCATCAGA       GAAAACGGGGAGCC AGT GGCTCCCCGTTTTG       TTGAGGGTGTCATGC 100 53
C2U40_RS01110  233375 ..  233398 -  -5.2  -2.74192   CATGTGCCAAGAGGA          GCCAGTATAC GCGA GCACTCTGGC           GGCGTCAGGCTGTCA  48 53
C2U40_RS01105  232758 ..  232778 -  -3.1  -2.64616   GGGCGAGCCAGATCA            CAGGGCCAG CTC CCAGCCACG            GGGGGCGTCCGGGCT  40 2
C2U40_RS01100 NONE
C2U40_RS01095  231958 ..  231968 -    -4  -4.08216   CCAGCTTGGCGAAAA                 TTCA GCC TGAA                 AATGGCAGGGGACTG  60 153
C2U40_RS01090  231392 ..  231411 -   -10  -4.96848   CTGGCCAGACAAAAA            CGGCAACC TTCA GGTTGCCA             TTTTTCATGGTTCCA 100 48
C2U40_RS01055  223270 ..  223284 -  -4.2  -2.59748   TAGGGTGACAATCTA               CCCAGA TTG TCTGCG               CAAGGTCAAATAACA  43 117
C2U40_RS01050  220470 ..  220499 - -20.9  -2.87132   TGGGCCCTGTAGATA       TGACAAAGGGCGC CGAG GCGCCCTTTGTCA        TTGAGGGGAGCTTGA 100 53
C2U40_RS01035 NONE
C2U40_RS01030  214871 ..  214897 - -10.8  -3.53012   GCCGTCTTCGGCAAA         CGGCCGCCCG GTTACGG CAAGCGGCCG         TTTTGTTGGCGCCAG  78 10
C2U40_RS01025  214409 ..  214438 - -16.5  -4.12902   CAACCAGCCGCAAAA       GAGAGAGGCGACC CCAG GGTCGCCTCTCTT        GTATCGGTCAGGTGG 100 46
C2U40_RS01005  210286 ..  210303 - -12.7  -3.35798   ACCCGGGATCGACAA             GGGCTGC CTGG GCAGCCC              TTTTGTTTATCCGTC  83 160
C2U40_RS00995  207981 ..  208014 - -21.1  -2.71731   CTGAGCTGGCAAGCA     TCAACACCACCCCGC CCCG GCGGGGTGGTGTTGT      TATGGGGGCGTGCCG 100 25
C2U40_RS00925  195738 ..  195748 -  -6.8  -2.52946   TGTCGTCATAAAAGG                 GCCA TCT TGGC                 GGGTCAATATTGCTT  52 29
C2U40_RS00920  194737 ..  194753 - -10.8  -3.76952   GTTATTTAAGTTAAA              GGCGGG TTTTG CCCGCC              TTCAATTAGTGTAAC  84 31
        pckA  192932 ..  192956 - -18.7  -5.40072   CTCTGCTCAAAAAAA          TACCGGTCAGC TGG GCTGACCGGTA          TTAGATTGGCAGTAA 100 53
C2U40_RS00910 NONE
C2U40_RS00905  190260 ..  190277 - -12.7  -5.40072   CGGCGGGCAAAAAAA             CAGGGCC CGCG GGCCCTG              TTTCATCAGACAAGC 100 55
C2U40_RS00900  189725 ..  189746 -  -3.6  -4.65895   GGCGGCAGTCAAAAA           GGAGCCAC AGGGTA GTGGGCCC            GCGGGACTGATGCAA  70 78
C2U40_RS00895  189193 ..  189203 -  -2.4  -3.56727   TGTAACCAATTATAA                 GGCC CGG GCCC                 CGCAAACCCCGTCAC  49 48
C2U40_RS00890  188574 ..  188592 -   -16  -5.80364   ATGGCAATAAAAAAA             GCCCTCGC ACT GCGAGGGC             TTTTTCATGGGCGGA 100 45
C2U40_RS00870  183895 ..  183915 -    -4  -3.19889   TATCAACAGAGGGAA            TTGAGAAG GGATG CTACTCAA            GTGGTGGCGGGAGAA  47 247
C2U40_RS00865  182951 ..  182965 -  -2.8  -3.54424   TTTTACCCCTCCAAA               GCCA AGGTGAA TGGC               CGGTTCAGCCGGGTT  49 30
C2U40_RS00860  180806 ..  180822 - -13.7   -5.4505   TGGTCCAATAAAAAA              GCCCGCA GAG TGCGGGC              TTTTTACAAGGTGGG 100 51
C2U40_RS00855 NONE
C2U40_RS00850  178671 ..  178690 -    -2  -3.07259   AATTAGGCTGAAAAC            GGGGTGTC TTGT GACACATC             TCTCAAATACCACGA  42 333
C2U40_RS00845 NONE
C2U40_RS00840  175371 ..  175385 -  -2.8  -2.78384   CCGGTTTTTATCATA               TGGG GCAAATT CCCA               TGCCATTCAACCGGT  41 78
C2U40_RS00835 NONE
C2U40_RS00830 NONE
C2U40_RS00825 NONE
C2U40_RS00820 NONE
C2U40_RS00805 NONE
C2U40_RS00800 NONE
C2U40_RS25135 NONE
C2U40_RS00795  168801 ..  168823 -  -7.7  -5.15634   CATTGCAGCAAAAAA          CCGGG--GCCC GAG GGGCAGCCCGG          TCATTAACTGCGCGG  93 29
C2U40_RS00790  168171 ..  168188 - -12.7  -3.99324   TCTCACCATGACAAA             CCCCTGC CTCG GCAGGGG              TTTGTTTTTTGGGGC  93 72
        merR NONE
C2U40_RS25925  166397 ..  166420 -    -3  -4.41548   CTATATCGGAGAAAA          CGGGCT-GCGC CGT GCGCAAGGGCG          CGCATTGTATCAGAA  67 114
C2U40_RS00780  164960 ..  164988 - -18.9  -2.72745   GGCACGGATAAATAT        GAAACAGGCGCCG AAC CGGCGCCTGTATC        GTGAACCTTAGCCCA 100 33
C2U40_RS00775  164446 ..  164456 -  -2.4  -3.14132   CTGGTGCGCCAGCAA                 CGGC TGC GCCT                 TTCTGGCGGTGGTGC  43 202
C2U40_RS00765  162469 ..  162500 - -20.2  -3.66095   AAAGGTGCACTGAAA      CCAGGAGGGCTCCC GTGT GGGAGCCCTCCTTG       AGTGGCAGCTTGGTG 100 60
C2U40_RS25890 NONE
C2U40_RS25885 NONE
C2U40_RS00750 NONE
C2U40_RS25880 NONE
C2U40_RS00745 NONE
C2U40_RS00740 NONE
C2U40_RS25870 NONE
C2U40_RS00735 NONE
C2U40_RS25865 NONE
C2U40_RS00730 NONE
C2U40_RS00725 NONE
C2U40_RS00720 NONE
C2U40_RS00685  144881 ..  144912 - -13.8  -2.82681   CAAAAGGCGAGCAGA      TCCGCCCGAGGT AATGAACA ACCTCGGGCAGA       TGGCAGGAACGACCC  85 43
C2U40_RS25790 NONE
C2U40_RS00680  141651 ..  141670 - -16.4  -2.83119   AATCGTTCATAAGCA            GGGGCGGC CATG GCCGCCCC             TTGTCATAGCCGTCT 100 46
C2U40_RS00675  140474 ..  140531 - -47.5  -3.35046   TGATCGCCGGAAATA CCGACCCCTCAATAGCAGAGACCCGCC TGTT GGCGGGTCTCTGCTATTGAGGGGTCGG CGCGCTGCTGGTTGG 100 11
C2U40_RS25775  139759 ..  139773 -  -9.2  -2.76249   CAAACACGGCAACCA               CGACGG CAT CCGCCG               CTGCCTCGGCCAGTG  63 30
C2U40_RS00660  139237 ..  139258 - -13.7  -5.14477   GACAGATTCAAAAAA           GCCCTACCC ATAT GGGCAGGGC            TGTTGGCGGTGCCGG 100 46
C2U40_RS25770 NONE
C2U40_RS00655 NONE
C2U40_RS00650  137414 ..  137433 -   -15  -3.58162   GCAGTATCAAAGCAA            GGGGCCCA GATA TGGGCCCC             TTTTTATTTTGGTTA 100 50
C2U40_RS25755 NONE
C2U40_RS00630  134150 ..  134174 -  -7.2   -3.5774   ACCCAATCCGGCAAA         GCAATTGCGCC CGTT GGCG-AACTGC          GCCCCCCCTTGTGCG  63 58
C2U40_RS00625  132747 ..  132767 -   -14  -5.14563   CCGCTGACCAAAAAA            GAGCGGGC TGGAT GCCCGCTC            CTGCGTTGACTGACT 100 40
C2U40_RS00620  131996 ..  132014 -   -16  -3.95435   GGCCGGAAAAGAGAA             CGCCCCGA TCA TCGGGGCG             TTTTGCGTGGTGTCG 100 55
C2U40_RS00610  129862 ..  129882 -    -9  -5.15634   CACGGCAGCAAAAAA           GGGAG-GGC GGCT GCCACTCCC            TTGGTGACCGGACGG 100 72
C2U40_RS00600  127305 ..  127324 - -13.6  -4.93877   GCTGACGAAATAAAA            GAGGCTCC CCTG GGAGCCTC             TTTGCGTTGGCGAGC 100 44
C2U40_RS00580 NONE
C2U40_RS00575  123538 ..  123556 - -11.7  -5.06414   GGTTGGCAACAAAAA             GGGCTCC GTGAT GGAGCCC             TTTTTCGTGGGGGAG 100 42
C2U40_RS00555  117049 ..  117064 - -11.8  -5.24129   GCCTCCTACAAAAAA              CCCGCC AATC GGCGGG               TTTTGTTTTATGGCG 100 42
C2U40_RS00545  115851 ..  115862 -  -5.8  -3.44527   TACCTATCAGCAGAA                CTCG CCGT CGAG                 GTAGGGACTGGCTCA  58 38
C2U40_RS25670 NONE
C2U40_RS00535 NONE
C2U40_RS25660 NONE
C2U40_RS00530 NONE
C2U40_RS25655 NONE
C2U40_RS25650  111197 ..  111215 -  -5.9  -4.09519   ATTACCCAGAAAGAA             CTCAGGC AACTG GCCAGAG             ACAGGCTGACCTTCG  68 485
C2U40_RS00510 NONE
C2U40_RS25625 NONE
C2U40_RS00505  106255 ..  106270 - -11.8  -4.34402   GGCCGGATAGCAAAA              GGGGCC CGCA GGCCCC               TGGTCGCGTCAGGCG  95 34
C2U40_RS00500  105011 ..  105035 -  -4.3  -3.16564   CCTCTATCGCAGCAA         CGGCATGGTG TTTGGC CAC-ACGCCG          GATCACATCCAGCGC  49 137
C2U40_RS00490  103049 ..  103061 -  -2.7  -2.69042   ACAGCATGAAATGCA                TCTCT GGT AGAAA                GCCTGAGCCGCCATG  40 46
C2U40_RS00485  102349 ..  102361 -  -4.7  -3.07443   GCAGAGGGCACTCAA                GCTGG CGC CCGGC                CAGATCCTGCACGTG  47 303
        cyaY NONE
C2U40_RS00450   96608 ..   96627 -   -15  -4.44548   CATATCGAATGAAAA            CGGCCTGC ATCT GCAGGCCG             TTTGGCTATCCGCGG 100 46
C2U40_RS00440 NONE
C2U40_RS00435 NONE
C2U40_RS00430 NONE
C2U40_RS00425   89718 ..   89737 - -11.4  -5.10208   CAATCCCAATAAAAA            GAAGCCGC AACT GCGGCCTC             TTTTTATTTTGCGAC 100 50
C2U40_RS00410   86847 ..   86874 - -19.8  -4.18494   GACGCGGATGCAAAA        GAGCGCGCCGGC ATCA GCCGGCGCGCGC         AGTGCAGAGGGGCCC 100 44
C2U40_RS00405   85660 ..   85673 -  -2.3  -2.77344   TGACTCTTGAAGAAG               CGACC TGAT GGTCT                GAACTTGTTGATTTA  39 216
C2U40_RS00400   83548 ..   83571 - -16.8  -4.82901   GGTGCTTCATAAAAA          TCTGGCCAGC GAAC GCTGGCCAGA           GGGATCGGGAAAAGG 100 47
C2U40_RS00395   82904 ..   82927 -  -3.8  -2.71712   TTGCCGTCGGTAAAT          GCGCTAG-AGC AGG GCCACCAGCAC          GGTGACCAAGGCGCC  43 5
C2U40_RS00390 NONE
C2U40_RS00385   80964 ..   80985 - -15.9  -4.77567   ACCTCCATAACAAAA           CAGGCGACC CGCG GGTCGCCTG            TTGCCGTTAGCCGGC 100 32
C2U40_RS00380   80391 ..   80405 -  -8.5  -3.05384   CTGGCCCGGAGTGAA               GCGGG GGCGG CCCGC               GACGAGCCCCATCTC  57 52
C2U40_RS00370   79370 ..   79392 -  -4.7  -2.78384   TGGTGGCGCACGACA           GCGAGCGCC TGATC GGCACCTGC           GGCCTGCACAGCTTT  44 276
C2U40_RS00355   77567 ..   77586 -   -15  -4.78149   CGCACAAGTCAAAAA            GGGCGACC CATG GGTCGCCC             TTTTTCTTGGTGTTG 100 44
C2U40_RS00340 NONE
C2U40_RS00335 NONE
C2U40_RS25480   73615 ..   73635 -  -6.1  -3.32022   TTTGGCATATAGTAA            CGCCGCA ATTTTCA TGCGACG            TATTCAGTGATTTTT  56 61
C2U40_RS00330   72392 ..   72445 - -10.3  -3.53811   GCGAGCTGGCGCAAA CCGGCCAGCCGGTGCTGCTGCT CACTCCGCCCC AG-AACGGCACCGGCGAGCCGG TGGACACCCGCGCCA  74 411
C2U40_RS00315 NONE
C2U40_RS25470 NONE
C2U40_RS25465   66425 ..   66437 -  -6.9   -3.5944   ATCGAGACGCTGAAA                GCCGC CGA GCAGC                TGGTGAAAGAGGGCT  63 116
C2U40_RS25460   65035 ..   65047 -  -6.3   -3.5511   TCTTAGTGACAAAGA                GTATC TGC GATAC                GGCCGTCAGCTGATG  59 62
C2U40_RS25455   64070 ..   64124 -  -2.6  -3.01712   CGCCGCGCCTGAATA CCCGCCACGGCCACGGCACCGG TTGCTGCTACG CCAGCGCCATCGCCGCCGTGGT GGCGCAGGATTATCC  42 341
C2U40_RS25450 NONE
C2U40_RS25445   61616 ..   61642 -    -5  -2.75069   GGCACCAAAGAAGAT         CCCCGGTTCG AGCCCAA CGAGCCGGTG         CCGGTCTATGACACT  46 30
C2U40_RS25440   60669 ..   60691 -  -5.5  -3.82824   TACCATGCAGAACAA          CCTGGC-CAG AGTG CTGCGCCCGG           TGCGGGCGGGGATCA  62 185
C2U40_RS00260 NONE
C2U40_RS00255 NONE
C2U40_RS25420 NONE
C2U40_RS25415 NONE
C2U40_RS00235   47982 ..   48013 -  -9.4  -4.07687   ACTTTTTTCTGAAAA      TCAAGGCGGCCTTC CCCG GAAAGCCGCGATGA       ACCTTTTTTCATCAC  81 62
C2U40_RS00225 NONE
C2U40_RS25400 NONE
C2U40_RS25395 NONE
C2U40_RS25390 NONE
C2U40_RS25385   44827 ..   44841 -  -6.4  -2.52464   TTCTGGGGCAAGGTA               TTCGAC GTG GCCGAA               CTGGCCAGACGGCTG  49 122
C2U40_RS00210 NONE
C2U40_RS25380 NONE
C2U40_RS00205   43035 ..   43048 -  -2.3  -2.87132   GTGTGTTTGGAGACA               GCCAG TTTA CCAGC                ACCCTGTCTGTCAAC  41 84
C2U40_RS00200   41755 ..   41781 - -22.4   -4.7629   CCATGAATGGAAAAA         GGGCCGGATCCT GTC AGGATCCGGCCC         TTATTTTGGGTTCAT 100 37
C2U40_RS00190   40319 ..   40344 - -12.5  -3.14051   CCAGTTGCAGCAACA         GGGCCAGCCGC TGTC GCGGATAGCCC          TCGAACTGGGTTACG  81 68
C2U40_RS00180 NONE
C2U40_RS00175 NONE
C2U40_RS00170 NONE
C2U40_RS24715 NONE
C2U40_RS24960 NONE
C2U40_RS00165 NONE
C2U40_RS00160   32896 ..   32917 -  -7.9  -2.72511   TGGATCCGCGCAAAC           TGCCTGCCA CTCT CGGCGGGCA            TGAGTTTGACGCGGC  57 206
C2U40_RS00150   30837 ..   30855 -  -7.3  -5.22312   AGCCATATGAAAAAA             GCCCTGC ACTGG GCGGGGC             TCGGAATGGTTCAGG  95 36
        merP NONE
C2U40_RS00145 NONE
C2U40_RS24915 NONE
C2U40_RS00140   29612 ..   29631 - -16.4  -5.28942   CATGGGAAACAAAAA            GCCCCGGC AAGT GCCGGGGC             TGCAGATACGGGGCT 100 44
C2U40_RS25125 NONE
C2U40_RS24540   26647 ..   26671 -  -3.3  -3.45737   CAATCAGCAGCAGAA          GGAGGCGGTCG ACG CGGTGGCCCCC          AACCTGCCAACGCAG  49 14
C2U40_RS25115   26200 ..   26219 -  -4.8  -3.51825   CGAGGTCAACGACAA            GGGGGCGC GACT GCTCTCCC             TGCTCAGCCTGGATT  53 21
C2U40_RS25110 NONE
C2U40_RS25105 NONE
C2U40_RS24895 NONE
C2U40_RS25100   23949 ..   23967 -    -6  -3.04144   GCCCGACCGGCAAGA             TCCAGGAT CTG ATCCTGCA             GGCGGATGCCGGCTG  53 249
C2U40_RS25095   22138 ..   22156 -  -8.8  -3.62046   TGAGCTTGCCAACAA             GCTGGAGT ACT ACTCCGGC             GAGTCGCCGATCTTC  69 197
C2U40_RS24850 NONE
C2U40_RS25250   20338 ..   20374 -  -2.1  -3.31144   GTTCCAGTTCCAGAA    GATCCGCAACTTCTCCC TCT GGCAACAGGCGCTGATC    ATCGGTTGCCTCTCG  45 9
C2U40_RS25245 NONE
C2U40_RS24830 NONE
C2U40_RS24825 NONE
C2U40_RS25240 NONE
C2U40_RS24655 NONE
C2U40_RS24650 NONE
C2U40_RS24645 NONE
        traA NONE
C2U40_RS24640 NONE
C2U40_RS24635 NONE
C2U40_RS25065 NONE
C2U40_RS24630 NONE
C2U40_RS25060 NONE
C2U40_RS24810 NONE
C2U40_RS25055 NONE
C2U40_RS24625 NONE
C2U40_RS25050 NONE
C2U40_RS24800 NONE
C2U40_RS24620 NONE
C2U40_RS24615 NONE
C2U40_RS24610 NONE
C2U40_RS24795 NONE
C2U40_RS24605   11111 ..   11142 -    -8  -3.01712   CGCGCTGTCTCAAGA      TTTGGGAGGG-TCTG CTG CAGAACCCGCCCAAG      GCTACCGCCAGCTTC  59 445
C2U40_RS24785 NONE
C2U40_RS25025 NONE
C2U40_RS25190 NONE
C2U40_RS25185    7858 ..    7868 -  -8.2  -3.30771   CGACATCTCCGAGAA                 GCGG CTG CCGC                 AGGATGGCCGCTTCA  65 219
C2U40_RS25170    6617 ..    6645 -  -4.3  -2.71364   CGATCCCCGCAATCA        GGGGGCGCGCGAG CAG CTGGCGGGCCTGC        TCTACGGCGAGGGGC  46 91
C2U40_RS25010 NONE
C2U40_RS25005 NONE
C2U40_RS25160 NONE
C2U40_RS25000    1906 ..    1922 -  -9.3  -2.70525   GCGCTGGAAATCAAG              CGCGGCG AGG CGCAGCG              GCTGGATGCCGAGCT  63 235
C2U40_RS24555 NONE
C2U40_RS25145 NONE
C2U40_RS24725 NONE
C2U40_RS25140 NONE
C2U40_RS24550 NONE
        merR NONE
C2U40_RS24720     137 ..     155 -  -2.3  -3.33696   CTCGTCGGCAATGAA             GCTGCCC CCCTT GAGCACC             GCGATGGCGAGGATC   0 259
