C2U47_RS00005	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS00005	SM00267	diguanylate cyclase
C2U47_RS00020	SM00448	cheY-homologous receiver domain
C2U47_RS00025	SM00091	PAS domain
C2U47_RS00050	SM00360	RNA recognition motif
C2U47_RS00140	SM00487	DEAD-like helicases superfamily
C2U47_RS00215	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
C2U47_RS00220	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U47_RS00220	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
C2U47_RS00260	SM01211	C2U47_RS00260
C2U47_RS00265	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS00270	SM01126	C2U47_RS00270
C2U47_RS00285	SM00564	beta-propeller repeat
C2U47_RS00305	SM00530	Helix-turn-helix XRE-family like proteins 
C2U47_RS00310	SM00028	Tetratricopeptide repeats
C2U47_RS00320	SM00562	C2U47_RS00320
C2U47_RS00390	SM00028	Tetratricopeptide repeats
C2U47_RS00395	SM00450	Rhodanese Homology Domain
C2U47_RS00410	SM01323	C2U47_RS00410
C2U47_RS00425	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U47_RS00460	SM00671	Sel1-like repeats.
C2U47_RS00495	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS00520	SM00487	DEAD-like helicases superfamily
C2U47_RS00530	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS00600	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS00645	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS00650	SM00479	C2U47_RS00650
C2U47_RS00670	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS00670	SM00267	diguanylate cyclase
C2U47_RS00680	SM00487	DEAD-like helicases superfamily
C2U47_RS00680	SM00490	helicase superfamily c-terminal domain
C2U47_RS00710	SM01091	Transporter associated domain
C2U47_RS00720	SM00829	Enoylreductase
C2U47_RS00785	SM00267	diguanylate cyclase
C2U47_RS00790	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U47_RS00790	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS00790	SM00397	Helical region found in SNAREs
C2U47_RS00825	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS00870	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U47_RS00880	SM00014	Acid phosphatase homologues
C2U47_RS00915	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS00985	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS00985	SM00267	diguanylate cyclase
C2U47_RS01005	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS01010	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U47_RS01025	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS01035	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS01060	SM01351	C2U47_RS01060
C2U47_RS01070	SM00487	DEAD-like helicases superfamily
C2U47_RS01070	SM00490	helicase superfamily c-terminal domain
C2U47_RS01100	SM00267	diguanylate cyclase
C2U47_RS01105	SM00917	LeuA allosteric (dimerisation) domain
C2U47_RS01110	SM00851	MGS-like domain
C2U47_RS01110	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
C2U47_RS01115	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
C2U47_RS01155	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS01165	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS01190	SM00899	C2U47_RS01190
C2U47_RS01220	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS01265	SM00840	C2U47_RS01265
C2U47_RS01295	SM00829	Enoylreductase
C2U47_RS01335	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2U47_RS01335	SM00465	GIY-YIG type nucleases (URI domain)
C2U47_RS01340	SM00421	helix_turn_helix, Lux Regulon
C2U47_RS01340	SM00448	cheY-homologous receiver domain
C2U47_RS01360	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS01365	SM00849	Metallo-beta-lactamase superfamily
C2U47_RS01400	SM00491	C2U47_RS01400
C2U47_RS01425	SM00098	Alkaline phosphatase homologues
C2U47_RS01430	SM00098	Alkaline phosphatase homologues
C2U47_RS01455	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS01455	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U47_RS01465	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS01495	SM01091	Transporter associated domain
C2U47_RS01505	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS01575	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS01575	SM00448	cheY-homologous receiver domain
C2U47_RS01585	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS01620	SM01321	C2U47_RS01620
C2U47_RS01625	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U47_RS01625	SM00924	MgtE intracellular N domain
C2U47_RS01640	SM01126	C2U47_RS01640
C2U47_RS01660	SM00047	Lysozyme subfamily 2
C2U47_RS01705	SM00138	Methyltransferase, chemotaxis proteins 
C2U47_RS01710	SM00260	Two component signalling adaptor domain
C2U47_RS01710	SM00448	cheY-homologous receiver domain
C2U47_RS01715	SM00858	C2U47_RS01715
C2U47_RS01740	SM01321	C2U47_RS01740
C2U47_RS01755	SM00363	S4 RNA-binding domain
C2U47_RS01760	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U47_RS01770	SM01321	C2U47_RS01770
C2U47_RS01815	SM00357	Cold shock protein domain
C2U47_RS01825	SM00861	Transketolase, pyrimidine binding domain
C2U47_RS01850	SM00487	DEAD-like helicases superfamily
C2U47_RS01850	SM00490	helicase superfamily c-terminal domain
C2U47_RS01890	SM00226	Low molecular weight phosphatase family
C2U47_RS01995	SM00822	C2U47_RS01995
C2U47_RS02015	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS02045	SM00448	cheY-homologous receiver domain
C2U47_RS02045	SM00862	Transcriptional regulatory protein, C terminal
C2U47_RS02050	SM00387	Histidine kinase-like ATPases
C2U47_RS02090	SM00481	DNA polymerase alpha chain like domain
C2U47_RS02185	SM00363	S4 RNA-binding domain
C2U47_RS02205	SM00481	DNA polymerase alpha chain like domain
C2U47_RS02240	SM01126	C2U47_RS02240
C2U47_RS02250	SM00530	Helix-turn-helix XRE-family like proteins 
C2U47_RS02290	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS02295	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS02375	SM01321	C2U47_RS02375
C2U47_RS02385	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U47_RS02415	SM00028	Tetratricopeptide repeats
C2U47_RS02415	SM00448	cheY-homologous receiver domain
C2U47_RS02490	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U47_RS02515	SM00354	helix_turn _helix lactose operon repressor
C2U47_RS02520	SM00640	Glycosyl hydrolases family 32
C2U47_RS02540	SM00271	DnaJ molecular chaperone homology domain
C2U47_RS02580	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS02600	SM00528	Domain in histone-like proteins of HNS family
C2U47_RS02620	SM01329	C2U47_RS02620
C2U47_RS02685	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
C2U47_RS02745	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U47_RS02755	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U47_RS02755	SM00091	PAS domain
C2U47_RS02755	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS02870	SM00448	cheY-homologous receiver domain
C2U47_RS02870	SM00862	Transcriptional regulatory protein, C terminal
C2U47_RS02885	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS02890	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS02925	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS02995	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS03035	SM00530	Helix-turn-helix XRE-family like proteins 
C2U47_RS03105	SM00091	PAS domain
C2U47_RS03105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS03105	SM00387	Histidine kinase-like ATPases
C2U47_RS03105	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS03105	SM00448	cheY-homologous receiver domain
C2U47_RS03175	SM00155	Phospholipase D. Active site motifs.
C2U47_RS03220	SM01321	C2U47_RS03220
C2U47_RS03230	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U47_RS03245	SM00267	diguanylate cyclase
C2U47_RS03260	SM00530	Helix-turn-helix XRE-family like proteins 
C2U47_RS03285	SM00919	Malic enzyme, NAD binding domain
C2U47_RS03285	SM01274	C2U47_RS03285
C2U47_RS03290	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS03305	SM00267	diguanylate cyclase
C2U47_RS03350	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS03365	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS03380	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS03430	SM00091	PAS domain
C2U47_RS03430	SM00387	Histidine kinase-like ATPases
C2U47_RS03430	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS03435	SM00448	cheY-homologous receiver domain
C2U47_RS03435	SM00862	Transcriptional regulatory protein, C terminal
C2U47_RS03445	SM00267	diguanylate cyclase
C2U47_RS03460	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS03485	SM00448	cheY-homologous receiver domain
C2U47_RS03490	SM00387	Histidine kinase-like ATPases
C2U47_RS03495	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U47_RS03540	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2U47_RS03540	SM00292	breast cancer carboxy-terminal domain
C2U47_RS03540	SM00532	Ligase N family
C2U47_RS03545	SM00771	ZipA, C-terminal domain (FtsZ-binding)
C2U47_RS03580	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS03605	SM00642	Alpha-amylase domain
C2U47_RS03615	SM00421	helix_turn_helix, Lux Regulon
C2U47_RS03615	SM00448	cheY-homologous receiver domain
C2U47_RS03650	SM00267	diguanylate cyclase
C2U47_RS03655	SM00977	TilS substrate C-terminal domain
C2U47_RS03670	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS03705	SM00481	DNA polymerase alpha chain like domain
C2U47_RS03735	SM00935	Outer membrane protein (OmpH-like)
C2U47_RS03745	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U47_RS03790	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U47_RS03870	SM00028	Tetratricopeptide repeats
C2U47_RS03875	SM00267	diguanylate cyclase
C2U47_RS03885	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
C2U47_RS03885	SM00475	5'-3' exonuclease
C2U47_RS03890	SM01329	C2U47_RS03890
C2U47_RS03920	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS03920	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS03960	SM00900	C2U47_RS03960
C2U47_RS04030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS04030	SM00387	Histidine kinase-like ATPases
C2U47_RS04030	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS04035	SM00448	cheY-homologous receiver domain
C2U47_RS04035	SM00862	Transcriptional regulatory protein, C terminal
C2U47_RS04075	SM00354	helix_turn _helix lactose operon repressor
C2U47_RS04085	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS04085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS04205	SM00422	helix_turn_helix, mercury resistance
C2U47_RS04235	SM00830	Chorismate mutase type II
C2U47_RS04275	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U47_RS04275	SM01134	C2U47_RS04275
C2U47_RS04290	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U47_RS04315	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS04315	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS04345	SM00463	Small MutS-related domain
C2U47_RS04355	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS04355	SM00478	endonuclease III
C2U47_RS04355	SM01009	AlkA N-terminal domain
C2U47_RS04420	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS04430	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U47_RS04480	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS04595	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS04675	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS04745	SM00530	Helix-turn-helix XRE-family like proteins 
C2U47_RS04770	SM00470	ParB-like nuclease domain
C2U47_RS04805	SM00387	Histidine kinase-like ATPases
C2U47_RS04805	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS04810	SM00421	helix_turn_helix, Lux Regulon
C2U47_RS04810	SM00448	cheY-homologous receiver domain
C2U47_RS04830	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U47_RS04850	SM01005	Alanine racemase, C-terminal domain
C2U47_RS04855	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS04860	SM00978	C2U47_RS04860
C2U47_RS04880	SM00028	Tetratricopeptide repeats
C2U47_RS04885	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS04885	SM00448	cheY-homologous receiver domain
C2U47_RS04895	SM00320	WD40 repeats
C2U47_RS04920	SM00260	Two component signalling adaptor domain
C2U47_RS04920	SM00448	cheY-homologous receiver domain
C2U47_RS04930	SM00267	diguanylate cyclase
C2U47_RS04960	SM00100	Cyclic nucleotide-monophosphate binding domain
C2U47_RS04960	SM00419	helix_turn_helix, cAMP Regulatory protein
C2U47_RS04970	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
C2U47_RS04970	SM00495	Chitin-binding domain type 3
C2U47_RS04970	SM00636	C2U47_RS04970
C2U47_RS04975	SM00387	Histidine kinase-like ATPases
C2U47_RS04975	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS04975	SM00448	cheY-homologous receiver domain
C2U47_RS05025	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS05035	SM00984	UDP binding domain
C2U47_RS05050	SM01259	C2U47_RS05050
C2U47_RS05065	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS05080	SM00271	DnaJ molecular chaperone homology domain
C2U47_RS05110	SM00650	Ribosomal RNA adenine dimethylases
C2U47_RS05125	SM00530	Helix-turn-helix XRE-family like proteins 
C2U47_RS05135	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U47_RS05170	SM00244	prohibitin homologues
C2U47_RS05175	SM00244	prohibitin homologues
C2U47_RS05195	SM00853	MutL C terminal dimerisation domain
C2U47_RS05195	SM01340	C2U47_RS05195
C2U47_RS05200	SM00257	Lysin motif
C2U47_RS05200	SM00646	C2U47_RS05200
C2U47_RS05230	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS05230	SM00930	C2U47_RS05230
C2U47_RS05245	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
C2U47_RS05250	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS05250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS05255	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS05255	SM00448	cheY-homologous receiver domain
C2U47_RS05260	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS05260	SM00073	Histidine Phosphotransfer domain
C2U47_RS05260	SM00387	Histidine kinase-like ATPases
C2U47_RS05260	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS05260	SM00448	cheY-homologous receiver domain
C2U47_RS05275	SM00073	Histidine Phosphotransfer domain
C2U47_RS05275	SM00091	PAS domain
C2U47_RS05275	SM00387	Histidine kinase-like ATPases
C2U47_RS05275	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS05275	SM00448	cheY-homologous receiver domain
C2U47_RS05320	SM01130	C2U47_RS05320
C2U47_RS05375	SM00014	Acid phosphatase homologues
C2U47_RS05385	SM00917	LeuA allosteric (dimerisation) domain
C2U47_RS05390	SM01329	C2U47_RS05390
C2U47_RS05425	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS05430	SM00670	Large family of predicted nucleotide-binding domains
C2U47_RS05500	SM00014	Acid phosphatase homologues
C2U47_RS05535	SM00487	DEAD-like helicases superfamily
C2U47_RS05535	SM00490	helicase superfamily c-terminal domain
C2U47_RS05535	SM00847	Helicase associated domain (HA2)  Add an annotation
C2U47_RS05590	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS05645	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS05665	SM00091	PAS domain
C2U47_RS05665	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS05720	SM00244	prohibitin homologues
C2U47_RS05750	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U47_RS05765	SM00422	helix_turn_helix, mercury resistance
C2U47_RS05770	SM00798	AICARFT/IMPCHase bienzyme
C2U47_RS05770	SM00851	MGS-like domain
C2U47_RS05775	SM01209	C2U47_RS05775
C2U47_RS05775	SM01210	C2U47_RS05775
C2U47_RS05795	SM00028	Tetratricopeptide repeats
C2U47_RS05810	SM00400	zinc finger
C2U47_RS05810	SM00493	C2U47_RS05810
C2U47_RS05810	SM00766	DNA primase DnaG DnaB-binding
C2U47_RS05835	SM00257	Lysin motif
C2U47_RS05875	SM01192	C2U47_RS05875
C2U47_RS05875	SM01193	C2U47_RS05875
C2U47_RS05890	SM00954	Region found in RelA / SpoT proteins
C2U47_RS05900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS05900	SM00387	Histidine kinase-like ATPases
C2U47_RS05900	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS05900	SM00448	cheY-homologous receiver domain
C2U47_RS05910	SM00644	C2U47_RS05910
C2U47_RS05930	SM00358	Double-stranded RNA binding motif
C2U47_RS05930	SM00535	Ribonuclease III family
C2U47_RS06030	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C2U47_RS06060	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS06060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS06075	SM00822	C2U47_RS06075
C2U47_RS06110	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS06115	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS06125	SM01266	C2U47_RS06125
C2U47_RS06190	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U47_RS06205	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U47_RS06205	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U47_RS06205	SM00091	PAS domain
C2U47_RS06205	SM00267	diguanylate cyclase
C2U47_RS06220	SM00450	Rhodanese Homology Domain
C2U47_RS06230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U47_RS06275	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS06320	SM00421	helix_turn_helix, Lux Regulon
C2U47_RS06375	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS06390	SM00363	S4 RNA-binding domain
C2U47_RS06405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U47_RS06405	SM00895	C2U47_RS06405
C2U47_RS06425	SM01118	C2U47_RS06425
C2U47_RS06445	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS06455	SM00478	endonuclease III
C2U47_RS06515	SM01130	C2U47_RS06515
C2U47_RS06585	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS06670	SM00851	MGS-like domain
C2U47_RS06700	SM00354	helix_turn _helix lactose operon repressor
C2U47_RS06710	SM00642	Alpha-amylase domain
C2U47_RS06715	SM01266	C2U47_RS06715
C2U47_RS06720	SM00344	helix_turn_helix ASNC type
C2U47_RS06785	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS06805	SM00986	Uracil DNA glycosylase superfamily
C2U47_RS06805	SM00987	UreE urease accessory protein, C-terminal domain 
C2U47_RS06815	SM00465	GIY-YIG type nucleases (URI domain)
C2U47_RS06835	SM00563	Phosphate acyltransferases
C2U47_RS06865	SM00271	DnaJ molecular chaperone homology domain
C2U47_RS06955	SM00487	DEAD-like helicases superfamily
C2U47_RS06990	SM00885	D5 N terminal like
C2U47_RS07020	SM00857	Resolvase, N terminal domain
C2U47_RS07030	SM00422	helix_turn_helix, mercury resistance
C2U47_RS07055	SM00422	helix_turn_helix, mercury resistance
C2U47_RS07145	SM01091	Transporter associated domain
C2U47_RS07200	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C2U47_RS07210	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS07225	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
C2U47_RS07225	SM00534	ATPase domain of DNA mismatch repair MUTS family
C2U47_RS07240	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U47_RS07270	SM01207	C2U47_RS07270
C2U47_RS07275	SM00905	Dihydroneopterin aldolase
C2U47_RS07295	SM00833	Cobalamin synthesis protein cobW C-terminal domain
C2U47_RS07315	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS07330	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS07330	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS07335	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS07335	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS07360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U47_RS07360	SM00895	C2U47_RS07360
C2U47_RS07370	SM00644	C2U47_RS07370
C2U47_RS07430	SM00957	SecA DEAD-like domain
C2U47_RS07430	SM00958	SecA preprotein cross-linking domain
C2U47_RS07445	SM00864	Tubulin/FtsZ family, GTPase domain
C2U47_RS07445	SM00865	Tubulin/FtsZ family, C-terminal domain
C2U47_RS07450	SM00842	Cell division protein FtsA
C2U47_RS07540	SM00749	bacterial OsmY and nodulation domain
C2U47_RS07590	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U47_RS07595	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U47_RS07670	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS07690	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U47_RS07695	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS07795	SM00267	diguanylate cyclase
C2U47_RS07830	SM00876	Biotin and Thiamin Synthesis associated domain
C2U47_RS07870	SM00448	cheY-homologous receiver domain
C2U47_RS07870	SM00862	Transcriptional regulatory protein, C terminal
C2U47_RS07875	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS07890	SM01018	B12 binding domain
C2U47_RS07955	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U47_RS08025	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS08040	SM00965	Secretin and TonB N terminus short domain
C2U47_RS08070	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS08070	SM00267	diguanylate cyclase
C2U47_RS08075	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS08105	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U47_RS08105	SM00866	C2U47_RS08105
C2U47_RS08110	SM00947	Carbonic anhydrase
C2U47_RS08125	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS08130	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS08130	SM00962	SRP54-type protein, GTPase domain
C2U47_RS08130	SM00963	SRP54-type protein, helical bundle domain
C2U47_RS08160	SM00155	Phospholipase D. Active site motifs.
C2U47_RS08165	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS08255	SM00822	C2U47_RS08255
C2U47_RS08340	SM00662	RNA polymerases D
C2U47_RS08345	SM00363	S4 RNA-binding domain
C2U47_RS08345	SM01390	C2U47_RS08345
C2U47_RS08415	SM01374	C2U47_RS08415
C2U47_RS08435	SM00322	K homology RNA-binding domain
C2U47_RS08450	SM01382	C2U47_RS08450
C2U47_RS08450	SM01383	C2U47_RS08450
C2U47_RS08470	SM01403	C2U47_RS08470
C2U47_RS08480	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS08480	SM00387	Histidine kinase-like ATPases
C2U47_RS08480	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS08485	SM00448	cheY-homologous receiver domain
C2U47_RS08485	SM00862	Transcriptional regulatory protein, C terminal
C2U47_RS08495	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U47_RS08495	SM00732	Likely ribonuclease with RNase H fold.
C2U47_RS08535	SM00450	Rhodanese Homology Domain
C2U47_RS08555	SM00354	helix_turn _helix lactose operon repressor
C2U47_RS08565	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS08590	SM00155	Phospholipase D. Active site motifs.
C2U47_RS08595	SM00487	DEAD-like helicases superfamily
C2U47_RS08595	SM00490	helicase superfamily c-terminal domain
C2U47_RS08630	SM01230	C2U47_RS08630
C2U47_RS08640	SM00091	PAS domain
C2U47_RS08640	SM00387	Histidine kinase-like ATPases
C2U47_RS08640	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS08645	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS08645	SM00448	cheY-homologous receiver domain
C2U47_RS08655	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U47_RS08715	SM00257	Lysin motif
C2U47_RS08790	SM00530	Helix-turn-helix XRE-family like proteins 
C2U47_RS08805	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS08840	SM00326	Src homology 3 domains
C2U47_RS08855	SM01321	C2U47_RS08855
C2U47_RS08900	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS08920	SM00829	Enoylreductase
C2U47_RS08970	SM01038	Beta galactosidase small chain
C2U47_RS08975	SM00354	helix_turn _helix lactose operon repressor
C2U47_RS09015	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
C2U47_RS09015	SM00474	3'-5' exonuclease
C2U47_RS09015	SM00475	5'-3' exonuclease
C2U47_RS09015	SM00482	DNA polymerase A domain
C2U47_RS09035	SM00971	Serine acetyltransferase, N-terminal
C2U47_RS09045	SM00448	cheY-homologous receiver domain
C2U47_RS09045	SM00862	Transcriptional regulatory protein, C terminal
C2U47_RS09050	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS09050	SM00387	Histidine kinase-like ATPases
C2U47_RS09050	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS09080	SM00563	Phosphate acyltransferases
C2U47_RS09120	SM00354	helix_turn _helix lactose operon repressor
C2U47_RS09185	SM00829	Enoylreductase
C2U47_RS09195	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS09195	SM00267	diguanylate cyclase
C2U47_RS09235	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U47_RS09250	SM00530	Helix-turn-helix XRE-family like proteins 
C2U47_RS09315	SM01126	C2U47_RS09315
C2U47_RS09470	SM01126	C2U47_RS09470
C2U47_RS09475	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS09480	SM00387	Histidine kinase-like ATPases
C2U47_RS09480	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS09485	SM00448	cheY-homologous receiver domain
C2U47_RS09485	SM00862	Transcriptional regulatory protein, C terminal
C2U47_RS09535	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS09555	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS09570	SM00984	UDP binding domain
C2U47_RS09585	SM01259	C2U47_RS09585
C2U47_RS09640	SM00857	Resolvase, N terminal domain
C2U47_RS09645	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS09645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS09725	SM00360	RNA recognition motif
C2U47_RS09740	SM01001	AIR carboxylase
C2U47_RS09755	SM00448	cheY-homologous receiver domain
C2U47_RS09755	SM00850	LytTr DNA-binding domain
C2U47_RS09760	SM00387	Histidine kinase-like ATPases
C2U47_RS09770	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS09770	SM00387	Histidine kinase-like ATPases
C2U47_RS09770	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS09770	SM00448	cheY-homologous receiver domain
C2U47_RS09775	SM00421	helix_turn_helix, Lux Regulon
C2U47_RS09775	SM00448	cheY-homologous receiver domain
C2U47_RS09825	SM00267	diguanylate cyclase
C2U47_RS09875	SM00267	diguanylate cyclase
C2U47_RS09895	SM00072	Guanylate kinase homologues.
C2U47_RS09900	SM01409	C2U47_RS09900
C2U47_RS09905	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U47_RS09905	SM00954	Region found in RelA / SpoT proteins
C2U47_RS09925	SM00458	Ricin-type beta-trefoil
C2U47_RS09965	SM00091	PAS domain
C2U47_RS09965	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS09965	SM00387	Histidine kinase-like ATPases
C2U47_RS09995	SM00387	Histidine kinase-like ATPases
C2U47_RS09995	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS10000	SM00448	cheY-homologous receiver domain
C2U47_RS10000	SM00862	Transcriptional regulatory protein, C terminal
C2U47_RS10010	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS10040	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS10045	SM00387	Histidine kinase-like ATPases
C2U47_RS10045	SM00433	TopoisomeraseII
C2U47_RS10055	SM00480	DNA polymerase III beta subunit
C2U47_RS10060	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS10060	SM00760	Bacterial dnaA protein helix-turn-helix domain
C2U47_RS10065	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS10075	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS10090	SM01234	C2U47_RS10090
C2U47_RS10120	SM00530	Helix-turn-helix XRE-family like proteins 
C2U47_RS10150	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS10155	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS10170	SM01228	C2U47_RS10170
C2U47_RS10185	SM00470	ParB-like nuclease domain
C2U47_RS10225	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS10255	SM00448	cheY-homologous receiver domain
C2U47_RS10255	SM00862	Transcriptional regulatory protein, C terminal
C2U47_RS10260	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U47_RS10260	SM01134	C2U47_RS10260
C2U47_RS10285	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS10310	SM00487	DEAD-like helicases superfamily
C2U47_RS10310	SM00490	helicase superfamily c-terminal domain
C2U47_RS10315	SM00487	DEAD-like helicases superfamily
C2U47_RS10315	SM00490	helicase superfamily c-terminal domain
C2U47_RS10345	SM00421	helix_turn_helix, Lux Regulon
C2U47_RS10450	SM01004	Delta-aminolevulinic acid dehydratase
C2U47_RS10460	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS10460	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U47_RS10460	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U47_RS10460	SM00091	PAS domain
C2U47_RS10460	SM00267	diguanylate cyclase
C2U47_RS10480	SM00487	DEAD-like helicases superfamily
C2U47_RS10480	SM00490	helicase superfamily c-terminal domain
C2U47_RS10490	SM00357	Cold shock protein domain
C2U47_RS10490	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS10490	SM00959	Rho termination factor, N-terminal domain
C2U47_RS10525	SM00450	Rhodanese Homology Domain
C2U47_RS10535	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS10540	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS10545	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS10565	SM00354	helix_turn _helix lactose operon repressor
C2U47_RS10570	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U47_RS10570	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS10575	SM00849	Metallo-beta-lactamase superfamily
C2U47_RS10630	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS10635	SM00836	DALR anticodon binding domain
C2U47_RS10720	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS10720	SM00387	Histidine kinase-like ATPases
C2U47_RS10720	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS10725	SM00448	cheY-homologous receiver domain
C2U47_RS10725	SM00862	Transcriptional regulatory protein, C terminal
C2U47_RS10785	SM00881	CoA binding domain
C2U47_RS10860	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
C2U47_RS10860	SM01232	C2U47_RS10860
C2U47_RS10920	SM00422	helix_turn_helix, mercury resistance
C2U47_RS10925	SM00267	diguanylate cyclase
C2U47_RS10970	SM00563	Phosphate acyltransferases
C2U47_RS10975	SM00563	Phosphate acyltransferases
C2U47_RS11120	SM00487	DEAD-like helicases superfamily
C2U47_RS11120	SM00490	helicase superfamily c-terminal domain
C2U47_RS11135	SM00919	Malic enzyme, NAD binding domain
C2U47_RS11135	SM01274	C2U47_RS11135
C2U47_RS11145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS11145	SM00387	Histidine kinase-like ATPases
C2U47_RS11145	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS11155	SM00448	cheY-homologous receiver domain
C2U47_RS11155	SM00862	Transcriptional regulatory protein, C terminal
C2U47_RS11185	SM00901	C2U47_RS11185
C2U47_RS11205	SM00642	Alpha-amylase domain
C2U47_RS11250	SM01230	C2U47_RS11250
C2U47_RS11270	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS11305	SM00341	Helicase and RNase D C-terminal
C2U47_RS11305	SM00487	DEAD-like helicases superfamily
C2U47_RS11305	SM00490	helicase superfamily c-terminal domain
C2U47_RS11305	SM00956	C2U47_RS11305
C2U47_RS11370	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS11395	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS11395	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U47_RS11410	SM00836	DALR anticodon binding domain
C2U47_RS11410	SM01016	Arginyl tRNA synthetase N terminal dom
C2U47_RS11415	SM00464	Found in ATP-dependent protease La (LON)
C2U47_RS11460	SM00354	helix_turn _helix lactose operon repressor
C2U47_RS11465	SM01038	Beta galactosidase small chain
C2U47_RS11475	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS11485	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS11485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS11555	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS11555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS11580	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
C2U47_RS11580	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
C2U47_RS11605	SM00363	S4 RNA-binding domain
C2U47_RS11615	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS11615	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U47_RS11640	SM00344	helix_turn_helix ASNC type
C2U47_RS11645	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS11650	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U47_RS11670	SM00387	Histidine kinase-like ATPases
C2U47_RS11670	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS11680	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS11680	SM00448	cheY-homologous receiver domain
C2U47_RS11715	SM00448	cheY-homologous receiver domain
C2U47_RS11715	SM00862	Transcriptional regulatory protein, C terminal
C2U47_RS11720	SM00387	Histidine kinase-like ATPases
C2U47_RS11740	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C2U47_RS11740	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C2U47_RS11740	SM00493	C2U47_RS11740
C2U47_RS11795	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
C2U47_RS11795	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
C2U47_RS11800	SM00649	Ribosomal protein L11/L12
C2U47_RS11825	SM00663	RNA polymerase I subunit A N-terminus
C2U47_RS11865	SM00838	Elongation factor G C-terminus
C2U47_RS11865	SM00889	Elongation factor G, domain IV
C2U47_RS11925	SM01120	C2U47_RS11925
C2U47_RS11935	SM00091	PAS domain
C2U47_RS11965	SM00822	C2U47_RS11965
C2U47_RS11980	SM00014	Acid phosphatase homologues
C2U47_RS12000	SM01060	C2U47_RS12000
C2U47_RS12010	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS12010	SM00871	Bacterial transcription activator, effector binding domain
C2U47_RS12025	SM00267	diguanylate cyclase
C2U47_RS12035	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS12060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U47_RS12060	SM00866	C2U47_RS12060
C2U47_RS12065	SM00530	Helix-turn-helix XRE-family like proteins 
C2U47_RS12125	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS12135	SM00938	Nitrogen regulatory protein P-II
C2U47_RS12140	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U47_RS12140	SM00267	diguanylate cyclase
C2U47_RS12150	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS12160	SM00448	cheY-homologous receiver domain
C2U47_RS12160	SM00862	Transcriptional regulatory protein, C terminal
C2U47_RS12170	SM00357	Cold shock protein domain
C2U47_RS12195	SM00530	Helix-turn-helix XRE-family like proteins 
C2U47_RS12255	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS12290	SM00421	helix_turn_helix, Lux Regulon
C2U47_RS12305	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS12305	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS12335	SM00530	Helix-turn-helix XRE-family like proteins 
C2U47_RS12415	SM01219	C2U47_RS12415
C2U47_RS12480	SM00852	Probable molybdopterin binding domain
C2U47_RS12500	SM00344	helix_turn_helix ASNC type
C2U47_RS12625	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U47_RS12670	SM00487	DEAD-like helicases superfamily
C2U47_RS12670	SM00490	helicase superfamily c-terminal domain
C2U47_RS12730	SM00357	Cold shock protein domain
C2U47_RS12730	SM00955	C2U47_RS12730
C2U47_RS12745	SM00421	helix_turn_helix, Lux Regulon
C2U47_RS12825	SM00387	Histidine kinase-like ATPases
C2U47_RS12825	SM00433	TopoisomeraseII
C2U47_RS12830	SM00434	DNA Topoisomerase IV
C2U47_RS12900	SM01133	C2U47_RS12900
C2U47_RS12905	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
C2U47_RS12925	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U47_RS12925	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U47_RS12925	SM00091	PAS domain
C2U47_RS12925	SM00267	diguanylate cyclase
C2U47_RS12950	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS12965	SM00411	bacterial (prokaryotic) histone like domain
C2U47_RS13010	SM00487	DEAD-like helicases superfamily
C2U47_RS13010	SM00490	helicase superfamily c-terminal domain
C2U47_RS13025	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS13045	SM01152	C2U47_RS13045
C2U47_RS13115	SM00938	Nitrogen regulatory protein P-II
C2U47_RS13130	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS13145	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS13150	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS13150	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U47_RS13175	SM00671	Sel1-like repeats.
C2U47_RS13190	SM01091	Transporter associated domain
C2U47_RS13200	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS13200	SM00962	SRP54-type protein, GTPase domain
C2U47_RS13200	SM00963	SRP54-type protein, helical bundle domain
C2U47_RS13230	SM00927	DNA mismatch repair enzyme MutH
C2U47_RS13240	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U47_RS13270	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U47_RS13285	SM00904	Riboflavin kinase
C2U47_RS13365	SM00938	Nitrogen regulatory protein P-II
C2U47_RS13380	SM00267	diguanylate cyclase
C2U47_RS13385	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U47_RS13385	SM00357	Cold shock protein domain
C2U47_RS13385	SM00955	C2U47_RS13385
C2U47_RS13390	SM00967	RNA 2'-O ribose methyltransferase substrate binding
C2U47_RS13460	SM00829	Enoylreductase
C2U47_RS13500	SM00883	Chaperonin 10 Kd subunit
C2U47_RS13515	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS13515	SM00267	diguanylate cyclase
C2U47_RS13530	SM00487	DEAD-like helicases superfamily
C2U47_RS13530	SM00490	helicase superfamily c-terminal domain
C2U47_RS13580	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS13595	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS13595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS13595	SM01049	C2U47_RS13595
C2U47_RS13675	SM00028	Tetratricopeptide repeats
C2U47_RS13695	SM00642	Alpha-amylase domain
C2U47_RS13710	SM00487	DEAD-like helicases superfamily
C2U47_RS13710	SM00490	helicase superfamily c-terminal domain
C2U47_RS13715	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS13755	SM00822	C2U47_RS13755
C2U47_RS13760	SM00479	C2U47_RS13760
C2U47_RS13770	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS13770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS13775	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2U47_RS13780	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS13910	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS13910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS13925	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C2U47_RS13935	SM00642	Alpha-amylase domain
C2U47_RS13940	SM00642	Alpha-amylase domain
C2U47_RS13950	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS13950	SM00871	Bacterial transcription activator, effector binding domain
C2U47_RS13965	SM00829	Enoylreductase
C2U47_RS13970	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U47_RS13985	SM00344	helix_turn_helix ASNC type
C2U47_RS14035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U47_RS14080	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS14090	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U47_RS14090	SM00267	diguanylate cyclase
C2U47_RS14095	SM00028	Tetratricopeptide repeats
C2U47_RS14095	SM00267	diguanylate cyclase
C2U47_RS14120	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U47_RS14155	SM00507	HNH nucleases
C2U47_RS14185	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS14195	SM00487	DEAD-like helicases superfamily
C2U47_RS14195	SM00490	helicase superfamily c-terminal domain
C2U47_RS14200	SM00267	diguanylate cyclase
C2U47_RS14245	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS14255	SM00448	cheY-homologous receiver domain
C2U47_RS14255	SM00862	Transcriptional regulatory protein, C terminal
C2U47_RS14260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS14260	SM00387	Histidine kinase-like ATPases
C2U47_RS14260	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS14350	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS14360	SM00448	cheY-homologous receiver domain
C2U47_RS14375	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2U47_RS14490	SM00422	helix_turn_helix, mercury resistance
C2U47_RS14540	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS14545	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U47_RS14555	SM00260	Two component signalling adaptor domain
C2U47_RS14555	SM00448	cheY-homologous receiver domain
C2U47_RS14565	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS14580	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS14610	SM00450	Rhodanese Homology Domain
C2U47_RS14625	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS14655	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS14655	SM00091	PAS domain
C2U47_RS14655	SM00267	diguanylate cyclase
C2U47_RS14690	SM00479	C2U47_RS14690
C2U47_RS14730	SM00357	Cold shock protein domain
C2U47_RS14740	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS14740	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS14800	SM00495	Chitin-binding domain type 3
C2U47_RS14800	SM00636	C2U47_RS14800
C2U47_RS14805	SM00028	Tetratricopeptide repeats
C2U47_RS14855	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS14860	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS14895	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
C2U47_RS14925	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U47_RS14935	SM01012	C2U47_RS14935
C2U47_RS14950	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS14975	SM01057	Eukaryotic-type carbonic anhydrase
C2U47_RS14980	SM00477	DNA/RNA non-specific endonuclease
C2U47_RS14980	SM00892	DNA/RNA non-specific endonuclease
C2U47_RS14990	SM00852	Probable molybdopterin binding domain
C2U47_RS15015	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS15060	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS15060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS15070	SM00870	C2U47_RS15070
C2U47_RS15080	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C2U47_RS15115	SM01266	C2U47_RS15115
C2U47_RS15125	SM00829	Enoylreductase
C2U47_RS15150	SM00878	Biotin carboxylase C-terminal domain
C2U47_RS15170	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS15170	SM00091	PAS domain
C2U47_RS15170	SM00267	diguanylate cyclase
C2U47_RS15245	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS15265	SM00861	Transketolase, pyrimidine binding domain
C2U47_RS15300	SM01103	C2U47_RS15300
C2U47_RS15310	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS15350	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U47_RS15370	SM01387	C2U47_RS15370
C2U47_RS15375	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U47_RS15375	SM00322	K homology RNA-binding domain
C2U47_RS15465	SM00422	helix_turn_helix, mercury resistance
C2U47_RS15490	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U47_RS15505	SM00936	Penicillin-binding protein 5, C-terminal domain 
C2U47_RS15570	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U47_RS15570	SM01091	Transporter associated domain
C2U47_RS15585	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U47_RS15615	SM00267	diguanylate cyclase
C2U47_RS15625	SM00267	diguanylate cyclase
C2U47_RS15655	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS15665	SM00841	Elongation factor P, C-terminal
C2U47_RS15665	SM01185	C2U47_RS15665
C2U47_RS15675	SM01240	C2U47_RS15675
C2U47_RS15685	SM00387	Histidine kinase-like ATPases
C2U47_RS15685	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS15690	SM00448	cheY-homologous receiver domain
C2U47_RS15690	SM00862	Transcriptional regulatory protein, C terminal
C2U47_RS15705	SM01236	C2U47_RS15705
C2U47_RS15760	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS15760	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS15800	SM00849	Metallo-beta-lactamase superfamily
C2U47_RS15820	SM00842	Cell division protein FtsA
C2U47_RS15840	SM00965	Secretin and TonB N terminus short domain
C2U47_RS15905	SM01150	C2U47_RS15905
C2U47_RS15935	SM01022	C2U47_RS15935
C2U47_RS16025	SM00530	Helix-turn-helix XRE-family like proteins 
C2U47_RS16055	SM00857	Resolvase, N terminal domain
C2U47_RS16090	SM00857	Resolvase, N terminal domain
C2U47_RS16115	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U47_RS16120	SM00829	Enoylreductase
C2U47_RS16200	SM00829	Enoylreductase
C2U47_RS16225	SM00857	Resolvase, N terminal domain
C2U47_RS16240	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS16265	SM00487	DEAD-like helicases superfamily
C2U47_RS16315	SM01400	C2U47_RS16315
C2U47_RS16340	SM00937	C2U47_RS16340
C2U47_RS16375	SM00986	Uracil DNA glycosylase superfamily
C2U47_RS16375	SM00987	UreE urease accessory protein, C-terminal domain 
C2U47_RS16415	SM00732	Likely ribonuclease with RNase H fold.
C2U47_RS16440	SM00731	SprT homologues.
C2U47_RS16450	SM00861	Transketolase, pyrimidine binding domain
C2U47_RS16485	SM00363	S4 RNA-binding domain
C2U47_RS16490	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS16500	SM00788	Adenylosuccinate synthetase
C2U47_RS16530	SM00822	C2U47_RS16530
C2U47_RS16545	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C2U47_RS16545	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C2U47_RS16545	SM00493	C2U47_RS16545
C2U47_RS16555	SM00091	PAS domain
C2U47_RS16555	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS16575	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS16600	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U47_RS16615	SM00857	Resolvase, N terminal domain
C2U47_RS16640	SM00528	Domain in histone-like proteins of HNS family
C2U47_RS16660	SM00448	cheY-homologous receiver domain
C2U47_RS16660	SM00862	Transcriptional regulatory protein, C terminal
C2U47_RS16665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS16665	SM00387	Histidine kinase-like ATPases
C2U47_RS16665	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS16780	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS16820	SM00487	DEAD-like helicases superfamily
C2U47_RS16895	SM00487	DEAD-like helicases superfamily
C2U47_RS16895	SM00490	helicase superfamily c-terminal domain
C2U47_RS16920	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS16965	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U47_RS16965	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U47_RS16965	SM00091	PAS domain
C2U47_RS16965	SM00267	diguanylate cyclase
C2U47_RS16970	SM00530	Helix-turn-helix XRE-family like proteins 
C2U47_RS16990	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U47_RS16995	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U47_RS17035	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS17095	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS17095	SM00962	SRP54-type protein, GTPase domain
C2U47_RS17110	SM00448	cheY-homologous receiver domain
C2U47_RS17120	SM00073	Histidine Phosphotransfer domain
C2U47_RS17120	SM00260	Two component signalling adaptor domain
C2U47_RS17120	SM00387	Histidine kinase-like ATPases
C2U47_RS17120	SM01231	C2U47_RS17120
C2U47_RS17125	SM00448	cheY-homologous receiver domain
C2U47_RS17145	SM00260	Two component signalling adaptor domain
C2U47_RS17150	SM00260	Two component signalling adaptor domain
C2U47_RS17160	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS17325	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U47_RS17325	SM00895	C2U47_RS17325
C2U47_RS17395	SM00528	Domain in histone-like proteins of HNS family
C2U47_RS17415	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
C2U47_RS17530	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS17530	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS17545	SM01091	Transporter associated domain
C2U47_RS17605	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS17615	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U47_RS17615	SM00876	Biotin and Thiamin Synthesis associated domain
C2U47_RS17650	SM00890	Domain of unknown function
C2U47_RS17795	SM01081	Putative carbohydrate binding domain
C2U47_RS17850	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U47_RS17960	SM00354	helix_turn _helix lactose operon repressor
C2U47_RS17985	SM00257	Lysin motif
C2U47_RS17990	SM00849	Metallo-beta-lactamase superfamily
C2U47_RS18005	SM00479	C2U47_RS18005
C2U47_RS18045	SM00897	FIST N domain
C2U47_RS18045	SM01204	C2U47_RS18045
C2U47_RS18050	SM00387	Histidine kinase-like ATPases
C2U47_RS18050	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS18050	SM00448	cheY-homologous receiver domain
C2U47_RS18055	SM00464	Found in ATP-dependent protease La (LON)
C2U47_RS18065	SM00421	helix_turn_helix, Lux Regulon
C2U47_RS18065	SM00448	cheY-homologous receiver domain
C2U47_RS18070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS18070	SM00387	Histidine kinase-like ATPases
C2U47_RS18075	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U47_RS18090	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U47_RS18115	SM00852	Probable molybdopterin binding domain
C2U47_RS18145	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS18160	SM00852	Probable molybdopterin binding domain
C2U47_RS18170	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS18170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS18190	SM00867	YceI-like domain 
C2U47_RS18200	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
C2U47_RS18210	SM00563	Phosphate acyltransferases
C2U47_RS18240	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS18240	SM00267	diguanylate cyclase
C2U47_RS18245	SM00855	Phosphoglycerate mutase family
C2U47_RS18295	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C2U47_RS18300	SM00363	S4 RNA-binding domain
C2U47_RS18320	SM00871	Bacterial transcription activator, effector binding domain
C2U47_RS18345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U47_RS18410	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U47_RS18410	SM01134	C2U47_RS18410
C2U47_RS18430	SM00830	Chorismate mutase type II
C2U47_RS18505	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS18575	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS18575	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U47_RS18590	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS18595	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS18595	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U47_RS18620	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS18620	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U47_RS18620	SM00091	PAS domain
C2U47_RS18620	SM00267	diguanylate cyclase
C2U47_RS18625	SM00450	Rhodanese Homology Domain
C2U47_RS18630	SM01359	C2U47_RS18630
C2U47_RS18630	SM01360	C2U47_RS18630
C2U47_RS18645	SM00981	C2U47_RS18645
C2U47_RS18700	SM00858	C2U47_RS18700
C2U47_RS18725	SM00822	C2U47_RS18725
C2U47_RS18875	SM00900	C2U47_RS18875
C2U47_RS18985	SM00487	DEAD-like helicases superfamily
C2U47_RS18985	SM00490	helicase superfamily c-terminal domain
C2U47_RS19000	SM01321	C2U47_RS19000
C2U47_RS19020	SM00448	cheY-homologous receiver domain
C2U47_RS19020	SM00850	LytTr DNA-binding domain
C2U47_RS19060	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS19065	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS19075	SM01005	Alanine racemase, C-terminal domain
C2U47_RS19115	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS19115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS19165	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS19165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS19300	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS19370	SM00460	Transglutaminase/protease-like homologues
C2U47_RS19390	SM00974	C2U47_RS19390
C2U47_RS19430	SM01005	Alanine racemase, C-terminal domain
C2U47_RS19440	SM00493	C2U47_RS19440
C2U47_RS19450	SM00387	Histidine kinase-like ATPases
C2U47_RS19475	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS19475	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS19475	SM01049	C2U47_RS19475
C2U47_RS19525	SM00823	Phosphopantetheine attachment site
C2U47_RS19530	SM00822	C2U47_RS19530
C2U47_RS19535	SM00823	Phosphopantetheine attachment site
C2U47_RS19600	SM00893	Electron transfer flavoprotein domain
C2U47_RS19605	SM00893	Electron transfer flavoprotein domain
C2U47_RS19690	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS19715	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U47_RS19730	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS19740	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS19795	SM00825	Beta-ketoacyl synthase
C2U47_RS19835	SM00861	Transketolase, pyrimidine binding domain
C2U47_RS19850	SM00881	CoA binding domain
C2U47_RS19905	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U47_RS19910	SM00357	Cold shock protein domain
C2U47_RS19920	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS19920	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U47_RS19925	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U47_RS19945	SM00267	diguanylate cyclase
C2U47_RS19945	SM00448	cheY-homologous receiver domain
C2U47_RS19955	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
C2U47_RS19955	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
C2U47_RS19960	SM00344	helix_turn_helix ASNC type
C2U47_RS19965	SM00843	C2U47_RS19965
C2U47_RS19975	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS20005	SM00354	helix_turn _helix lactose operon repressor
C2U47_RS20015	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS20020	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS20040	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS20080	SM00091	PAS domain
C2U47_RS20080	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS20090	SM00267	diguanylate cyclase
C2U47_RS20100	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U47_RS20125	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U47_RS20125	SM01240	C2U47_RS20125
C2U47_RS20145	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS20165	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U47_RS20170	SM00364	Leucine-rich repeats, bacterial type
C2U47_RS20170	SM00369	Leucine-rich repeats, typical (most populated) subfamily
C2U47_RS20185	SM00855	Phosphoglycerate mutase family
C2U47_RS20210	SM00487	DEAD-like helicases superfamily
C2U47_RS20210	SM00490	helicase superfamily c-terminal domain
C2U47_RS20210	SM00982	C2U47_RS20210
C2U47_RS20210	SM01058	CarD-like/TRCF domain
C2U47_RS20225	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS20235	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U47_RS20260	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS20260	SM00994	ClpX C4-type zinc finger
C2U47_RS20260	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U47_RS20265	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS20265	SM00464	Found in ATP-dependent protease La (LON)
C2U47_RS20270	SM00411	bacterial (prokaryotic) histone like domain
C2U47_RS20280	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS20295	SM00479	C2U47_RS20295
C2U47_RS20300	SM00100	Cyclic nucleotide-monophosphate binding domain
C2U47_RS20300	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U47_RS20335	SM00422	helix_turn_helix, mercury resistance
C2U47_RS20345	SM00878	Biotin carboxylase C-terminal domain
C2U47_RS20345	SM01209	C2U47_RS20345
C2U47_RS20390	SM00822	C2U47_RS20390
C2U47_RS20430	SM00857	Resolvase, N terminal domain
C2U47_RS20440	SM00470	ParB-like nuclease domain
C2U47_RS20445	SM01252	C2U47_RS20445
C2U47_RS20480	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS20515	SM00267	diguanylate cyclase
C2U47_RS20530	SM00822	C2U47_RS20530
C2U47_RS20540	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS20550	SM00518	AP endonuclease family 2
C2U47_RS20580	SM00090	RIO-like kinase
C2U47_RS20590	SM00486	DNA polymerase type-B family
C2U47_RS20675	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U47_RS20685	SM01321	C2U47_RS20685
C2U47_RS20775	SM00422	helix_turn_helix, mercury resistance
C2U47_RS20785	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS20815	SM00028	Tetratricopeptide repeats
C2U47_RS20820	SM00327	von Willebrand factor (vWF) type A domain
C2U47_RS20855	SM01322	C2U47_RS20855
C2U47_RS20870	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS20885	SM00237	Domains in Na-Ca exchangers and integrin-beta4
C2U47_RS20930	SM00091	PAS domain
C2U47_RS20935	SM00448	cheY-homologous receiver domain
C2U47_RS20935	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U47_RS21000	SM00341	Helicase and RNase D C-terminal
C2U47_RS21000	SM00474	3'-5' exonuclease
C2U47_RS21015	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS21035	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS21060	SM00421	helix_turn_helix, Lux Regulon
C2U47_RS21065	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U47_RS21070	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS21070	SM00487	DEAD-like helicases superfamily
C2U47_RS21070	SM00490	helicase superfamily c-terminal domain
C2U47_RS21070	SM00847	Helicase associated domain (HA2)  Add an annotation
C2U47_RS21095	SM00849	Metallo-beta-lactamase superfamily
C2U47_RS21100	SM00450	Rhodanese Homology Domain
C2U47_RS21120	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
C2U47_RS21125	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS21135	SM00880	C2U47_RS21135
C2U47_RS21165	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U47_RS21170	SM00363	S4 RNA-binding domain
C2U47_RS21205	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
C2U47_RS21210	SM00822	C2U47_RS21210
C2U47_RS21220	SM00825	Beta-ketoacyl synthase
C2U47_RS21240	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS21310	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS21320	SM00981	C2U47_RS21320
C2U47_RS21350	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U47_RS21350	SM00245	tail specific protease
C2U47_RS21355	SM00945	ProQ/FINO family
C2U47_RS21410	SM00100	Cyclic nucleotide-monophosphate binding domain
C2U47_RS21410	SM00419	helix_turn_helix, cAMP Regulatory protein
C2U47_RS21445	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS21465	SM00354	helix_turn _helix lactose operon repressor
C2U47_RS21480	SM01321	C2U47_RS21480
C2U47_RS21505	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS21505	SM00387	Histidine kinase-like ATPases
C2U47_RS21505	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS21505	SM00448	cheY-homologous receiver domain
C2U47_RS21510	SM00411	bacterial (prokaryotic) histone like domain
C2U47_RS21515	SM00873	B3/4 domain
C2U47_RS21515	SM00874	tRNA synthetase B5 domain
C2U47_RS21515	SM00896	Ferredoxin-fold anticodon binding domain
C2U47_RS21540	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C2U47_RS21550	SM00671	Sel1-like repeats.
C2U47_RS21560	SM00434	DNA Topoisomerase IV
C2U47_RS21590	SM00925	MltA specific insert domain
C2U47_RS21615	SM00354	helix_turn _helix lactose operon repressor
C2U47_RS21630	SM00953	C2U47_RS21630
C2U47_RS21640	SM00487	DEAD-like helicases superfamily
C2U47_RS21640	SM00490	helicase superfamily c-terminal domain
C2U47_RS21645	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS21660	SM00463	Small MutS-related domain
C2U47_RS21695	SM00782	PhnA Zinc-Ribbon
C2U47_RS21860	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS21880	SM01144	C2U47_RS21880
C2U47_RS21890	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
C2U47_RS21900	SM00487	DEAD-like helicases superfamily
C2U47_RS21900	SM00490	helicase superfamily c-terminal domain
C2U47_RS21920	SM01118	C2U47_RS21920
C2U47_RS21990	SM00382	ATPases associated with a variety of cellular activities
C2U47_RS22000	SM00387	Histidine kinase-like ATPases
C2U47_RS22000	SM00388	His Kinase A (phosphoacceptor) domain
C2U47_RS22000	SM00448	cheY-homologous receiver domain
C2U47_RS22080	SM00763	PrkA AAA domain
C2U47_RS22095	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U47_RS22120	SM00487	DEAD-like helicases superfamily
C2U47_RS22120	SM00490	helicase superfamily c-terminal domain
C2U47_RS22140	SM00062	Bacterial periplasmic substrate-binding proteins
C2U47_RS22160	SM00448	cheY-homologous receiver domain
C2U47_RS22165	SM00387	Histidine kinase-like ATPases
C2U47_RS22175	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U47_RS22175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U47_RS22175	SM01049	C2U47_RS22175
C2U47_RS22265	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U47_RS22295	SM00267	diguanylate cyclase
C2U47_RS22300	SM00052	Putative diguanylate phosphodiesterase
C2U47_RS22305	SM00342	helix_turn_helix, arabinose operon control protein
C2U47_RS22305	SM00871	Bacterial transcription activator, effector binding domain
C2U47_RS22395	SM01154	C2U47_RS22395
C2U47_RS22410	SM00528	Domain in histone-like proteins of HNS family
C2U47_RS22435	SM01144	C2U47_RS22435
C2U47_RS22445	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
C2U47_RS22450	SM00028	Tetratricopeptide repeats
C2U47_RS22460	SM00411	bacterial (prokaryotic) histone like domain
C2U47_RS22465	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U47_RS22540	SM00857	Resolvase, N terminal domain
C2U47_RS22585	SM00382	ATPases associated with a variety of cellular activities
