locus-tag	class	description
NUT31_RS00010	COG2771	luxR family
NUT31_RS00065	COG0693	protein deglycase activity
NUT31_RS00070	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NUT31_RS00075	COG1666	GTP binding
NUT31_RS00080	COG3248	Nucleoside-binding outer membrane protein
NUT31_RS00085	COG2211	Major facilitator Superfamily
NUT31_RS00095	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NUT31_RS00105	COG2813	Specifically methylates the guanine in position
NUT31_RS00110	COG0271	Belongs to the BolA IbaG family
NUT31_RS00120	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NUT31_RS00125	COG1805	sodium ion transport
NUT31_RS00130	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NUT31_RS00135	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NUT31_RS00140	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NUT31_RS00145	COG2871	sodium ion transport
NUT31_RS00150	COG1477	protein flavinylation
NUT31_RS00165	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NUT31_RS00170	COG0840	transmembrane signaling receptor activity
NUT31_RS00175	COG0583	DNA-binding transcription factor activity
NUT31_RS00185	COG2363	Small membrane protein
NUT31_RS00190	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
NUT31_RS00200	COG0473	3-isopropylmalate dehydrogenase activity
NUT31_RS00205	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NUT31_RS00210	COG1611	Belongs to the LOG family
NUT31_RS00225	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
NUT31_RS00225	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
NUT31_RS00235	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
NUT31_RS00260	COG3098	single-species biofilm formation
NUT31_RS00265	COG0564	pseudouridine synthase activity
NUT31_RS00275	COG4580	involved in the transport of maltose and maltodextrins
NUT31_RS00285	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NUT31_RS00285	COG1263	PTS System
NUT31_RS00295	COG2171	N-acyltransferase activity
NUT31_RS00300	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
NUT31_RS00305	COG0024	Methionine aminopeptidase
NUT31_RS00310	COG0052	Belongs to the universal ribosomal protein uS2 family
NUT31_RS00315	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NUT31_RS00320	COG0528	UMP kinase activity
NUT31_RS00325	COG0233	cytoplasmic translational termination
NUT31_RS00330	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NUT31_RS00335	COG0575	Belongs to the CDS family
NUT31_RS00340	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
NUT31_RS00345	COG0750	zinc metalloprotease
NUT31_RS00360	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NUT31_RS00365	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
NUT31_RS00370	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NUT31_RS00375	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NUT31_RS00380	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NUT31_RS00390	COG0825	malonyl-CoA metabolic process
NUT31_RS00395	COG3710	Transcriptional regulator
NUT31_RS00400	COG0531	amino acid
NUT31_RS00405	COG1982	Orn Lys Arg decarboxylase major
NUT31_RS00410	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
NUT31_RS00425	COG0814	amino acid
NUT31_RS00430	COG0531	amino acid
NUT31_RS00440	COG0488	(ABC) transporter
NUT31_RS00450	COG3590	peptidase
NUT31_RS00460	COG3706	GGDEF domain
NUT31_RS00500	COG0366	Alpha amylase catalytic
NUT31_RS00515	COG0463	Glycosyl transferase, family 2
NUT31_RS00530	COG2989	Protein conserved in bacteria
NUT31_RS00535	COG3108	Peptidase M15
NUT31_RS00545	COG2860	membrane
NUT31_RS00555	COG1196	nuclear chromosome segregation
NUT31_RS00560	COG3115	cell septum assembly
NUT31_RS00565	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NUT31_RS00575	COG1328	CTP reductase activity
NUT31_RS00580	COG0602	queuosine metabolic process
NUT31_RS00610	COG1566	PFAM secretion protein HlyD family protein
NUT31_RS00615	COG1846	Transcriptional regulator
NUT31_RS00630	COG0281	malic enzyme
NUT31_RS00635	COG3290	protein histidine kinase activity
NUT31_RS00640	COG4565	transcriptional regulatory protein
NUT31_RS00645	COG0697	spore germination
NUT31_RS00660	COG3284	Transcriptional regulator
NUT31_RS00665	COG1960	acyl-CoA dehydrogenase activity
NUT31_RS00670	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NUT31_RS00675	COG0346	lactoylglutathione lyase activity
NUT31_RS00680	COG0745	RESPONSE REGULATOR receiver
NUT31_RS00685	COG5002	protein histidine kinase activity
NUT31_RS00710	COG3142	Participates in the control of copper homeostasis
NUT31_RS00720	COG0545	Peptidyl-prolyl cis-trans isomerase
NUT31_RS00725	COG1131	(ABC) transporter
NUT31_RS00745	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
NUT31_RS00755	COG0678	peroxiredoxin activity
NUT31_RS00765	COG0019	diaminopimelate decarboxylase activity
NUT31_RS00770	COG1115	amino acid carrier protein
NUT31_RS00775	COG0095	Lipoate-protein ligase
NUT31_RS00780	COG2233	PERMEase
NUT31_RS00795	COG0534	Mate efflux family protein
NUT31_RS00805	COG0281	malic enzyme
NUT31_RS00835	COG0733	neurotransmitter:sodium symporter activity
NUT31_RS00840	COG1752	Esterase of the alpha-beta hydrolase superfamily
NUT31_RS00850	COG1566	PFAM secretion protein HlyD family protein
NUT31_RS00855	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NUT31_RS00865	COG1032	radical SAM domain protein
NUT31_RS00880	COG2207	Transcriptional regulator
NUT31_RS00880	COG3708	Transcriptional regulator
NUT31_RS00885	COG3152	Membrane
NUT31_RS00905	COG0673	inositol 2-dehydrogenase activity
NUT31_RS00910	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
NUT31_RS00915	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
NUT31_RS00920	COG1196	nuclear chromosome segregation
NUT31_RS00920	COG0741	lytic transglycosylase activity
NUT31_RS00920	COG0739	heme binding
NUT31_RS00925	COG0366	Alpha amylase catalytic
NUT31_RS00945	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NUT31_RS00955	COG0788	formyltetrahydrofolate deformylase activity
NUT31_RS00960	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NUT31_RS00970	COG3118	belongs to the thioredoxin family
NUT31_RS00975	COG2091	lysine biosynthetic process via aminoadipic acid
NUT31_RS00980	COG0791	NLP P60 protein
NUT31_RS00985	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
NUT31_RS01000	COG1376	ErfK ybiS ycfS ynhG family protein
NUT31_RS01000	COG1388	LysM domain
NUT31_RS01055	COG4869	propanediol catabolic process
NUT31_RS01065	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NUT31_RS01070	COG1882	Formate acetyltransferase
NUT31_RS01075	COG1012	belongs to the aldehyde dehydrogenase family
NUT31_RS01075	COG1454	alcohol dehydrogenase
NUT31_RS01085	COG1012	belongs to the aldehyde dehydrogenase family
NUT31_RS01085	COG1454	alcohol dehydrogenase
NUT31_RS01120	COG0583	DNA-binding transcription factor activity
NUT31_RS01125	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
NUT31_RS01130	COG0243	molybdopterin cofactor binding
NUT31_RS01140	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
NUT31_RS01150	COG1960	acyl-CoA dehydrogenase activity
NUT31_RS01165	COG0469	pyruvate kinase activity
NUT31_RS01170	COG1737	Transcriptional regulator
NUT31_RS01190	COG2274	protein secretion by the type I secretion system
NUT31_RS01200	COG2274	protein secretion by the type I secretion system
NUT31_RS01210	COG2994	toxin metabolic process
NUT31_RS01215	COG1073	alpha beta
NUT31_RS01215	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
NUT31_RS01215	COG3064	Membrane
NUT31_RS01225	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NUT31_RS01240	COG1677	Flagellar hook-basal body complex protein FliE
NUT31_RS01250	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
NUT31_RS01305	COG1684	flagellar biosynthetic protein fliR
NUT31_RS01315	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NUT31_RS01340	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
NUT31_RS01345	COG0643	Histidine kinase
NUT31_RS01345	COG2198	Histidine kinase
NUT31_RS01345	COG0784	Response regulator, receiver
NUT31_RS01350	COG2201	protein-glutamate methylesterase activity
NUT31_RS01355	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
NUT31_RS01360	COG1360	Flagellar Motor Protein
NUT31_RS01365	COG1192	Involved in chromosome partitioning
NUT31_RS01375	COG0835	chemotaxis
NUT31_RS01390	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NUT31_RS01395	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NUT31_RS01400	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NUT31_RS01405	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
NUT31_RS01410	COG1138	Cytochrome C-type biogenesis protein
NUT31_RS01415	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NUT31_RS01420	COG3088	subunit of a heme lyase
NUT31_RS01420	COG4235	cytochrome complex assembly
NUT31_RS01425	COG4235	cytochrome complex assembly
NUT31_RS01425	COG3088	subunit of a heme lyase
NUT31_RS01440	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
NUT31_RS01445	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NUT31_RS01445	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NUT31_RS01460	COG0259	pyridoxamine-phosphate oxidase activity
NUT31_RS01465	COG0625	glutathione transferase activity
NUT31_RS01475	COG3153	acetyltransferase
NUT31_RS01485	COG2850	peptidyl-arginine hydroxylation
NUT31_RS01490	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NUT31_RS01495	COG2915	High frequency lysogenization protein hflD homolog
NUT31_RS01500	COG0482	sulfurtransferase activity
NUT31_RS01510	COG1187	pseudouridine synthase activity
NUT31_RS01520	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NUT31_RS01520	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NUT31_RS01520	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NUT31_RS01530	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NUT31_RS01530	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NUT31_RS01530	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NUT31_RS01550	COG0456	acetyltransferase
NUT31_RS01560	COG1609	Transcriptional regulator
NUT31_RS01565	COG1263	PTS System
NUT31_RS01565	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NUT31_RS01570	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
NUT31_RS01585	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NUT31_RS01610	COG2207	Transcriptional regulator
NUT31_RS01615	COG0538	isocitrate dehydrogenase activity
NUT31_RS01625	COG3048	D-serine ammonia-lyase activity
NUT31_RS01630	COG2610	gluconate transmembrane transporter activity
NUT31_RS01635	COG0583	DNA-binding transcription factor activity
NUT31_RS01640	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
NUT31_RS01695	COG0582	viral genome integration into host DNA
NUT31_RS01750	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
NUT31_RS01755	COG2867	negative regulation of translational initiation
NUT31_RS01760	COG2914	Belongs to the UPF0125 (RnfH) family
NUT31_RS01765	COG0702	epimerase
NUT31_RS01770	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NUT31_RS01800	COG4964	Belongs to the GSP D family
NUT31_RS01850	COG1454	alcohol dehydrogenase
NUT31_RS01890	COG1280	lysine exporter protein (LysE YggA)
NUT31_RS01910	COG3263	regulation of cellular component size
NUT31_RS01920	COG1876	peptidase activity
NUT31_RS01925	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NUT31_RS01930	COG1393	Belongs to the ArsC family
NUT31_RS01935	COG0583	DNA-binding transcription factor activity
NUT31_RS01945	COG3069	C4-dicarboxylate transmembrane transporter activity
NUT31_RS01950	COG1473	amidohydrolase
NUT31_RS01960	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
NUT31_RS01965	COG0017	Asparaginyl-tRNA synthetase
NUT31_RS01985	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
NUT31_RS01990	COG0156	8-amino-7-oxononanoate synthase activity
NUT31_RS01995	COG1073	alpha beta
NUT31_RS01995	COG2226	methyltransferase
NUT31_RS02000	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
NUT31_RS02005	COG0501	Belongs to the peptidase M48B family
NUT31_RS02015	COG0633	Ferredoxin
NUT31_RS02015	COG3217	Mosc domain protein beta barrel domain protein
NUT31_RS02015	COG0633	Ferredoxin
NUT31_RS02015	COG3217	Mosc domain protein beta barrel domain protein
NUT31_RS02025	COG0674	pyruvate-flavodoxin oxidoreductase activity
NUT31_RS02025	COG1013	pyruvate-flavodoxin oxidoreductase activity
NUT31_RS02025	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
NUT31_RS02025	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
NUT31_RS02050	COG0534	Mate efflux family protein
NUT31_RS02090	COG1309	transcriptional regulator
NUT31_RS02105	COG0791	NLP P60 protein
NUT31_RS02115	COG0583	DNA-binding transcription factor activity
NUT31_RS02120	COG0450	alkyl hydroperoxide reductase
NUT31_RS02145	COG0500	methyltransferase
NUT31_RS02150	COG4106	trans-aconitate 2-methyltransferase activity
NUT31_RS02155	COG1801	Protein of unknown function DUF72
NUT31_RS02160	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
NUT31_RS02165	COG0217	transcriptional regulatory protein
NUT31_RS02170	COG2194	sulfuric ester hydrolase activity
NUT31_RS02175	COG1940	carbohydrate kinase activity
NUT31_RS02175	COG1846	Transcriptional regulator
NUT31_RS02180	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
NUT31_RS02185	COG0363	glucosamine-6-phosphate deaminase activity
NUT31_RS02190	COG1263	PTS System
NUT31_RS02190	COG2190	(PTS) system
NUT31_RS02190	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NUT31_RS02200	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NUT31_RS02205	COG0735	belongs to the Fur family
NUT31_RS02215	COG0716	FMN binding
NUT31_RS02230	COG0596	Alpha beta hydrolase
NUT31_RS02235	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
NUT31_RS02240	COG0033	Phosphoglucomutase
NUT31_RS02250	COG1846	Transcriptional regulator
NUT31_RS02255	COG2951	lytic endotransglycosylase activity
NUT31_RS02260	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NUT31_RS02265	COG4136	ATPase activity
NUT31_RS02275	COG4134	Bacterial extracellular solute-binding protein
NUT31_RS02285	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NUT31_RS02295	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NUT31_RS02300	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NUT31_RS02310	COG0729	surface antigen
NUT31_RS02315	COG2911	Protein conserved in bacteria
NUT31_RS02335	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NUT31_RS02345	COG0741	lytic transglycosylase activity
NUT31_RS02360	COG1607	acyl-coa hydrolase
NUT31_RS02370	COG3021	interspecies interaction between organisms
NUT31_RS02375	COG0741	lytic transglycosylase activity
NUT31_RS02375	COG1388	LysM domain
NUT31_RS02380	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NUT31_RS02385	COG2226	methyltransferase
NUT31_RS02390	COG0328	RNA-DNA hybrid ribonuclease activity
NUT31_RS02405	COG3437	response regulator, receiver
NUT31_RS02405	COG0784	Response regulator, receiver
NUT31_RS02410	COG1960	acyl-CoA dehydrogenase activity
NUT31_RS02415	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
NUT31_RS02420	COG0121	glutamine amidotransferase
NUT31_RS02450	COG2197	response regulator
NUT31_RS02455	COG3850	Histidine kinase
NUT31_RS02460	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
NUT31_RS02465	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
NUT31_RS02465	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
NUT31_RS02475	COG0243	molybdopterin cofactor binding
NUT31_RS02480	COG0437	4 iron, 4 sulfur cluster binding
NUT31_RS02485	COG0348	domain, Protein
NUT31_RS02495	COG3005	denitrification pathway
NUT31_RS02500	COG0521	Mo-molybdopterin cofactor biosynthetic process
NUT31_RS02505	COG0315	cyclic pyranopterin monophosphate synthase activity
NUT31_RS02510	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
NUT31_RS02515	COG0314	molybdopterin synthase activity
NUT31_RS02530	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
NUT31_RS02535	COG2267	carboxylic ester hydrolase activity
NUT31_RS02540	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NUT31_RS02550	COG0302	gtp cyclohydrolase
NUT31_RS02555	COG0840	transmembrane signaling receptor activity
NUT31_RS02560	COG2759	Belongs to the formate--tetrahydrofolate ligase family
NUT31_RS02570	COG0583	DNA-binding transcription factor activity
NUT31_RS02600	COG2195	Cleaves the N-terminal amino acid of tripeptides
NUT31_RS02610	COG1166	arginine decarboxylase activity
NUT31_RS02630	COG0814	amino acid
NUT31_RS02640	COG3681	Belongs to the UPF0597 family
NUT31_RS02645	COG2964	Protein conserved in bacteria
NUT31_RS02655	COG1403	HNH endonuclease
NUT31_RS02665	COG0346	lactoylglutathione lyase activity
NUT31_RS02695	COG1187	pseudouridine synthase activity
NUT31_RS02705	COG2807	transmembrane transport
NUT31_RS02715	COG0583	DNA-binding transcription factor activity
NUT31_RS02720	COG2271	Major facilitator Superfamily
NUT31_RS02745	COG2979	Protein of unknown function (DUF533)
NUT31_RS02760	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NUT31_RS02770	COG1294	oxidase, subunit
NUT31_RS02780	COG2814	Major facilitator Superfamily
NUT31_RS02785	COG0656	L-ascorbic acid biosynthetic process
NUT31_RS02810	COG0583	DNA-binding transcription factor activity
NUT31_RS02815	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
NUT31_RS02820	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
NUT31_RS02825	COG2271	Major facilitator Superfamily
NUT31_RS02830	COG1349	DNA-binding transcription factor activity
NUT31_RS02845	COG0584	glycerophosphoryl diester phosphodiesterase
NUT31_RS02850	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NUT31_RS02855	COG0287	Prephenate dehydrogenase
NUT31_RS02855	COG1605	Chorismate mutase
NUT31_RS02860	COG0583	DNA-binding transcription factor activity
NUT31_RS02865	COG3085	chromosome segregation
NUT31_RS02870	COG4574	serine-type endopeptidase inhibitor activity
NUT31_RS02890	COG1770	oligopeptidase
NUT31_RS02895	COG4771	TonB-dependent receptor
NUT31_RS02900	COG3083	sulfuric ester hydrolase activity
NUT31_RS02905	COG3082	Protein of unknown function (DUF1414)
NUT31_RS02910	COG3081	Nucleoid-associated protein
NUT31_RS02920	COG1175	transmembrane transport
NUT31_RS02925	COG3833	ABC-type maltose transport systems, permease component
NUT31_RS02930	COG3842	ATPase activity
NUT31_RS02955	COG0425	Belongs to the sulfur carrier protein TusA family
NUT31_RS02960	COG4783	chaperone-mediated protein folding
NUT31_RS02970	COG1393	Belongs to the ArsC family
NUT31_RS02985	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
NUT31_RS02990	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
NUT31_RS02995	COG2431	L-lysine efflux transmembrane transporter activity
NUT31_RS03005	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NUT31_RS03030	COG1216	Glycosyl transferase, family 2
NUT31_RS03035	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NUT31_RS03050	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
NUT31_RS03095	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NUT31_RS03105	COG0446	pyridine nucleotide-disulphide oxidoreductase
NUT31_RS03110	COG2373	Large extracellular alpha-helical protein
NUT31_RS03115	COG4953	penicillin-binding protein 1C
NUT31_RS03125	COG0301	tRNA thio-modification
NUT31_RS03125	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NUT31_RS03140	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
NUT31_RS03185	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NUT31_RS03205	COG0483	inositol monophosphate 1-phosphatase activity
NUT31_RS03215	COG0625	glutathione transferase activity
NUT31_RS03220	COG2814	Major facilitator Superfamily
NUT31_RS03240	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NUT31_RS03245	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NUT31_RS03250	COG0404	The glycine cleavage system catalyzes the degradation of glycine
NUT31_RS03255	COG0509	glycine decarboxylation via glycine cleavage system
NUT31_RS03260	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
NUT31_RS03260	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
NUT31_RS03265	COG0640	Transcriptional regulator
NUT31_RS03270	COG0798	PFAM Bile acid sodium symporter
NUT31_RS03275	COG1393	Belongs to the ArsC family
NUT31_RS03290	COG3852	Histidine kinase
NUT31_RS03300	COG3634	alkyl hydroperoxide reductase activity
NUT31_RS03310	COG0517	IMP dehydrogenase activity
NUT31_RS03315	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
NUT31_RS03320	COG0343	queuine tRNA-ribosyltransferase activity
NUT31_RS03325	COG1862	Preprotein translocase
NUT31_RS03330	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NUT31_RS03335	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NUT31_RS03350	COG0826	peptidase U32
NUT31_RS03355	COG0826	peptidase U32
NUT31_RS03360	COG3154	lipid carrier protein
NUT31_RS03380	COG1104	cysteine desulfurase activity
NUT31_RS03385	COG0822	iron-sulfur transferase activity
NUT31_RS03395	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
NUT31_RS03400	COG0443	Heat shock 70 kDa protein
NUT31_RS03405	COG0633	Ferredoxin
NUT31_RS03415	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
NUT31_RS03420	COG0105	UTP biosynthetic process
NUT31_RS03425	COG0820	rRNA (adenine-C2-)-methyltransferase activity
NUT31_RS03445	COG0124	histidyl-tRNA synthetase
NUT31_RS03450	COG2976	Protein conserved in bacteria
NUT31_RS03455	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NUT31_RS03460	COG1160	GTP binding
NUT31_RS03465	COG1645	bacterial-type flagellum-dependent swarming motility
NUT31_RS03470	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
NUT31_RS03475	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NUT31_RS03475	COG0047	phosphoribosylformylglycinamidine synthase activity
NUT31_RS03480	COG1007	ATP synthesis coupled electron transport
NUT31_RS03485	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NUT31_RS03495	COG0713	ATP synthesis coupled electron transport
NUT31_RS03500	COG0839	Belongs to the complex I subunit 6 family
NUT31_RS03505	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NUT31_RS03510	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
NUT31_RS03515	COG1034	ATP synthesis coupled electron transport
NUT31_RS03530	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NUT31_RS03530	COG0649	NAD binding
NUT31_RS03535	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NUT31_RS03540	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NUT31_RS03545	COG1360	Flagellar Motor Protein
NUT31_RS03550	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
NUT31_RS03570	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
NUT31_RS03590	COG0724	RNA recognition motif
NUT31_RS03595	COG4989	oxidoreductase activity
NUT31_RS03620	COG3437	response regulator, receiver
NUT31_RS03625	COG0583	DNA-binding transcription factor activity
NUT31_RS03635	COG3300	MHYT domain
NUT31_RS03635	COG5001	Diguanylate cyclase
NUT31_RS03640	COG0778	Nitroreductase
NUT31_RS03660	COG0583	DNA-binding transcription factor activity
NUT31_RS03670	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NUT31_RS03675	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
NUT31_RS03680	COG0539	negative regulation of cytoplasmic translation
NUT31_RS03685	COG0776	regulation of translation
NUT31_RS03695	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
NUT31_RS03715	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
NUT31_RS03720	COG0602	queuosine metabolic process
NUT31_RS03725	COG3530	Putative quorum-sensing-regulated virulence factor
NUT31_RS03730	COG2096	Adenosyltransferase
NUT31_RS03735	COG2916	Histone family protein nucleoid-structuring protein H-NS
NUT31_RS03740	COG1757	Na H antiporter
NUT31_RS03745	COG1435	thymidine kinase activity
NUT31_RS03775	COG3501	Rhs element vgr protein
NUT31_RS03850	COG3829	transcription factor binding
NUT31_RS03925	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NUT31_RS03930	COG1278	Cold shock
NUT31_RS03935	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
NUT31_RS03940	COG0542	response to heat
NUT31_RS03945	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
NUT31_RS03950	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
NUT31_RS03955	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
NUT31_RS03960	COG3134	Outer membrane lipoprotein
NUT31_RS03965	COG3706	GGDEF domain
NUT31_RS03970	COG0492	ferredoxin-NADP+ reductase activity
NUT31_RS03975	COG0686	Belongs to the AlaDH PNT family
NUT31_RS03985	COG0531	amino acid
NUT31_RS03985	COG1674	ftsk spoiiie
NUT31_RS03990	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
NUT31_RS03995	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
NUT31_RS04000	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NUT31_RS04005	COG1286	toxin biosynthetic process
NUT31_RS04010	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
NUT31_RS04020	COG4172	Belongs to the ABC transporter superfamily
NUT31_RS04030	COG4171	peptide transport system, permease
NUT31_RS04035	COG4168	peptide transport system, permease
NUT31_RS04045	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
NUT31_RS04050	COG1842	Phage shock protein A
NUT31_RS04065	COG3106	COG3106 Predicted ATPase
NUT31_RS04070	COG3768	UPF0283 membrane protein
NUT31_RS04080	COG2154	pterin-4-alpha-carbinolamine dehydratase
NUT31_RS04095	COG2199	diguanylate cyclase activity
NUT31_RS04100	COG2885	chlorophyll binding
NUT31_RS04105	COG0861	Integral membrane protein TerC family
NUT31_RS04120	COG1022	Amp-dependent synthetase and ligase
NUT31_RS04125	COG0295	cytidine deaminase activity
NUT31_RS04130	COG1346	cytolysis
NUT31_RS04135	COG1380	Effector of murein hydrolase LrgA
NUT31_RS04140	COG3345	alpha-galactosidase
NUT31_RS04150	COG2925	Exonuclease
NUT31_RS04165	COG0137	argininosuccinate synthase activity
NUT31_RS04185	COG0542	response to heat
NUT31_RS04200	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
NUT31_RS04225	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
NUT31_RS04305	COG2160	L-arabinose isomerase activity
NUT31_RS04315	COG1069	ribulokinase activity
NUT31_RS04320	COG1879	ABC-type sugar transport system periplasmic component
NUT31_RS04330	COG1172	Belongs to the binding-protein-dependent transport system permease family
NUT31_RS04350	COG0257	Belongs to the bacterial ribosomal protein bL36 family
NUT31_RS04355	COG0254	rRNA binding
NUT31_RS04370	COG1451	nucleotide metabolic process
NUT31_RS04385	COG3069	C4-dicarboxylate transmembrane transporter activity
NUT31_RS04395	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
NUT31_RS04395	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NUT31_RS04400	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
NUT31_RS04425	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
NUT31_RS04430	COG1053	succinate dehydrogenase
NUT31_RS04440	COG0567	Dehydrogenase, E1 component
NUT31_RS04445	COG0508	dehydrogenase complex catalyzes the overall conversion of
NUT31_RS04450	COG0045	succinate-CoA ligase (ADP-forming) activity
NUT31_RS04455	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
NUT31_RS04465	COG2983	Belongs to the UPF0260 family
NUT31_RS04470	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NUT31_RS04480	COG3842	ATPase activity
NUT31_RS04485	COG1840	ABC-type Fe3 transport system, periplasmic component
NUT31_RS04495	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
NUT31_RS04500	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NUT31_RS04505	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NUT31_RS04510	COG1882	Formate acetyltransferase
NUT31_RS04515	COG2116	formate transmembrane transporter activity
NUT31_RS04520	COG1944	ATP diphosphatase activity
NUT31_RS04530	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NUT31_RS04535	COG0612	Peptidase, M16
NUT31_RS04540	COG0626	cystathionine gamma-synthase activity
NUT31_RS04550	COG2910	NAD(P)H-binding
NUT31_RS04555	COG0583	DNA-binding transcription factor activity
NUT31_RS04565	COG4977	sequence-specific DNA binding
NUT31_RS04570	COG4774	siderophore transport
NUT31_RS04580	COG0583	DNA-binding transcription factor activity
NUT31_RS04585	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
NUT31_RS04610	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NUT31_RS04615	COG3046	protein related to deoxyribodipyrimidine photolyase
NUT31_RS04625	COG3033	Beta-eliminating lyase
NUT31_RS04635	COG1051	belongs to the nudix hydrolase family
NUT31_RS04640	COG4235	cytochrome complex assembly
NUT31_RS04640	COG3088	subunit of a heme lyase
NUT31_RS04645	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NUT31_RS04650	COG1138	Cytochrome C-type biogenesis protein
NUT31_RS04655	COG3301	Polysulphide reductase, NrfD
NUT31_RS04660	COG0437	4 iron, 4 sulfur cluster binding
NUT31_RS04665	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
NUT31_RS04675	COG0247	lactate metabolic process
NUT31_RS04680	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
NUT31_RS04685	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
NUT31_RS04690	COG3012	SEC-C Motif Domain Protein
NUT31_RS04695	COG0840	transmembrane signaling receptor activity
NUT31_RS04700	COG1940	carbohydrate kinase activity
NUT31_RS04700	COG1846	Transcriptional regulator
NUT31_RS04705	COG3290	protein histidine kinase activity
NUT31_RS04710	COG4565	transcriptional regulatory protein
NUT31_RS04730	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
NUT31_RS04735	COG0569	domain protein
NUT31_RS04735	COG2985	domain, Protein
NUT31_RS04745	COG0556	nucleotide-excision repair
NUT31_RS04755	COG0586	Pfam SNARE associated Golgi protein
NUT31_RS04760	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
NUT31_RS04765	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
NUT31_RS04770	COG2186	Transcriptional regulator
NUT31_RS04775	COG2719	SpoVR family
NUT31_RS04785	COG2766	serine protein kinase
NUT31_RS04790	COG0514	ATP-dependent DNA helicase (RecQ)
NUT31_RS04795	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
NUT31_RS04800	COG0814	amino acid
NUT31_RS04830	COG0058	SHG alpha-glucan phosphorylase activity
NUT31_RS04835	COG0471	metal ion transport
NUT31_RS04840	COG3118	belongs to the thioredoxin family
NUT31_RS04850	COG1132	(ABC) transporter
NUT31_RS04855	COG1132	(ABC) transporter
NUT31_RS04870	COG2501	S4 domain
NUT31_RS04880	COG3243	poly(R)-hydroxyalkanoic acid synthase
NUT31_RS04905	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
NUT31_RS04910	COG2329	Antibiotic biosynthesis monooxygenase
NUT31_RS04940	COG1742	UPF0060 membrane protein
NUT31_RS04950	COG0456	acetyltransferase
NUT31_RS04955	COG0513	Belongs to the DEAD box helicase family
NUT31_RS04960	COG0386	Belongs to the glutathione peroxidase family
NUT31_RS04970	COG1181	Belongs to the D-alanine--D-alanine ligase family
NUT31_RS04980	COG3148	PFAM DTW domain containing protein
NUT31_RS04985	COG0730	response to heat
NUT31_RS04990	COG0583	DNA-binding transcription factor activity
NUT31_RS05000	COG4977	sequence-specific DNA binding
NUT31_RS05010	COG3593	DNA synthesis involved in DNA repair
NUT31_RS05060	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
NUT31_RS05065	COG1011	Hydrolase
NUT31_RS05070	COG1473	amidohydrolase
NUT31_RS05075	COG0205	6-phosphofructokinase activity
NUT31_RS05085	COG1434	Gram-negative-bacterium-type cell wall biogenesis
NUT31_RS05090	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
NUT31_RS05100	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
NUT31_RS05105	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
NUT31_RS05110	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
NUT31_RS05120	COG0242	peptide deformylase activity
NUT31_RS05160	COG2824	Alkylphosphonate utilization operon protein PhnA
NUT31_RS05200	COG3706	GGDEF domain
NUT31_RS05210	COG2840	Smr protein MutS2
NUT31_RS05215	COG2890	protein-(glutamine-N5) methyltransferase activity
NUT31_RS05220	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
NUT31_RS05230	COG0513	Belongs to the DEAD box helicase family
NUT31_RS05235	COG5654	RES domain protein
NUT31_RS05245	COG0814	amino acid
NUT31_RS05250	COG1609	Transcriptional regulator
NUT31_RS05255	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NUT31_RS05255	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
NUT31_RS05260	COG1105	Belongs to the carbohydrate kinase PfkB family
NUT31_RS05265	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NUT31_RS05265	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NUT31_RS05265	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
NUT31_RS05270	COG2140	Oxalate decarboxylase
NUT31_RS05275	COG1609	Transcriptional regulator
NUT31_RS05290	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NUT31_RS05290	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
NUT31_RS05295	COG3715	PTS system
NUT31_RS05300	COG3716	PTS system mannose fructose sorbose family IID component
NUT31_RS05310	COG3313	Fe-S protein
NUT31_RS05315	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
NUT31_RS05320	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NUT31_RS05325	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NUT31_RS05330	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NUT31_RS05340	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
NUT31_RS05365	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NUT31_RS05370	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NUT31_RS05375	COG0291	Belongs to the bacterial ribosomal protein bL35 family
NUT31_RS05380	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NUT31_RS05385	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NUT31_RS05390	COG0072	phenylalanine-tRNA ligase activity
NUT31_RS05390	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NUT31_RS05395	COG0776	regulation of translation
NUT31_RS05425	COG3300	MHYT domain
NUT31_RS05425	COG5001	Diguanylate cyclase
NUT31_RS05430	COG1609	Transcriptional regulator
NUT31_RS05435	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NUT31_RS05440	COG1879	ABC-type sugar transport system periplasmic component
NUT31_RS05445	COG1172	Belongs to the binding-protein-dependent transport system permease family
NUT31_RS05450	COG1129	ABC transporter
NUT31_RS05455	COG1869	D-ribose catabolic process
NUT31_RS05475	COG0037	tRNA processing
NUT31_RS05480	COG0589	response to stress
NUT31_RS05485	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NUT31_RS05510	COG2010	Cytochrome c
NUT31_RS05525	COG3278	Belongs to the heme-copper respiratory oxidase family
NUT31_RS05535	COG1956	GAF domain-containing protein
NUT31_RS05540	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
NUT31_RS05550	COG0308	aminopeptidase N
NUT31_RS05560	COG2902	Dehydrogenase
NUT31_RS05565	COG0167	dihydroorotate dehydrogenase activity
NUT31_RS05580	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
NUT31_RS05580	COG0116	Belongs to the methyltransferase superfamily
NUT31_RS05590	COG0488	(ABC) transporter
NUT31_RS05605	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
NUT31_RS05610	COG1067	ATP-dependent peptidase activity
NUT31_RS05650	COG4128	Pfam Zonular occludens toxin
NUT31_RS05670	COG3141	response to X-ray
NUT31_RS05680	COG4221	oxidoreductase activity
NUT31_RS05725	COG0372	Belongs to the citrate synthase family
NUT31_RS05730	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
NUT31_RS05740	COG2995	paraquat-inducible protein a
NUT31_RS05745	COG3008	intermembrane lipid transfer
NUT31_RS05750	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NUT31_RS05750	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
NUT31_RS05765	COG0084	hydrolase, TatD family'
NUT31_RS05770	COG0470	DNA polymerase III
NUT31_RS05775	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NUT31_RS05780	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NUT31_RS05785	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
NUT31_RS05795	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NUT31_RS05800	COG1028	Short-chain dehydrogenase reductase Sdr
NUT31_RS05810	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NUT31_RS05815	COG0416	fatty acid biosynthetic process
NUT31_RS05820	COG0333	Belongs to the bacterial ribosomal protein bL32 family
NUT31_RS05825	COG1399	metal-binding, possibly nucleic acid-binding protein
NUT31_RS05840	COG2814	Major facilitator Superfamily
NUT31_RS05845	COG0424	maF-like protein
NUT31_RS05850	COG0546	phosphoglycolate phosphatase activity
NUT31_RS05855	COG0564	pseudouridine synthase activity
NUT31_RS05860	COG1530	ribonuclease E activity
NUT31_RS05865	COG0306	phosphate transporter
NUT31_RS05870	COG0717	Belongs to the dCTP deaminase family
NUT31_RS05875	COG0572	uridine kinase
NUT31_RS05880	COG0489	protein tyrosine kinase activity
NUT31_RS05885	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NUT31_RS05885	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NUT31_RS05890	COG0625	glutathione transferase activity
NUT31_RS05895	COG1254	Belongs to the acylphosphatase family
NUT31_RS05900	COG0840	transmembrane signaling receptor activity
NUT31_RS05905	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
NUT31_RS05920	COG0709	Synthesizes selenophosphate from selenide and ATP
NUT31_RS05925	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
NUT31_RS05930	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NUT31_RS05935	COG3437	response regulator, receiver
NUT31_RS05945	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
NUT31_RS05955	COG1643	Atp-dependent helicase
NUT31_RS05960	COG0517	IMP dehydrogenase activity
NUT31_RS05960	COG0617	tRNA 3'-terminal CCA addition
NUT31_RS05960	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
NUT31_RS05975	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
NUT31_RS05985	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NUT31_RS05990	COG2832	Protein of unknown function (DUF454)
NUT31_RS05995	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NUT31_RS06015	COG0318	PFAM AMP-dependent synthetase and ligase
NUT31_RS06020	COG0596	Alpha beta hydrolase
NUT31_RS06020	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NUT31_RS06020	COG2226	methyltransferase
NUT31_RS06030	COG1214	PFAM Peptidase M22, glycoprotease
NUT31_RS06035	COG1199	ATP-dependent helicase activity
NUT31_RS06045	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
NUT31_RS06050	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
NUT31_RS06055	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NUT31_RS06060	COG0131	Imidazoleglycerol-phosphate dehydratase
NUT31_RS06060	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
NUT31_RS06065	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
NUT31_RS06070	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
NUT31_RS06075	COG3437	response regulator, receiver
NUT31_RS06080	COG2199	diguanylate cyclase activity
NUT31_RS06085	COG0784	Response regulator, receiver
NUT31_RS06085	COG2198	Histidine kinase
NUT31_RS06085	COG2205	protein histidine kinase activity
NUT31_RS06090	COG0107	imidazoleglycerol-phosphate synthase activity
NUT31_RS06095	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
NUT31_RS06095	COG0140	phosphoribosyl-ATP diphosphatase activity
NUT31_RS06105	COG2378	regulation of single-species biofilm formation
NUT31_RS06110	COG0318	PFAM AMP-dependent synthetase and ligase
NUT31_RS06115	COG1288	antiporter activity
NUT31_RS06125	COG3134	Outer membrane lipoprotein
NUT31_RS06135	COG2080	2 iron, 2 sulfur cluster binding
NUT31_RS06140	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
NUT31_RS06145	COG1529	Aldehyde oxidase and xanthine dehydrogenase
NUT31_RS06150	COG2252	PERMEase
NUT31_RS06155	COG0402	S-adenosylhomocysteine deaminase activity
NUT31_RS06160	COG2233	PERMEase
NUT31_RS06165	COG1529	Aldehyde oxidase and xanthine dehydrogenase
NUT31_RS06165	COG2080	2 iron, 2 sulfur cluster binding
NUT31_RS06170	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
NUT31_RS06175	COG0402	S-adenosylhomocysteine deaminase activity
NUT31_RS06180	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
NUT31_RS06180	COG0493	'glutamate synthase
NUT31_RS06185	COG2068	MobA-Related Protein
NUT31_RS06190	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NUT31_RS06195	COG3608	succinylglutamate desuccinylase aspartoacylase
NUT31_RS06195	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
NUT31_RS06200	COG0697	spore germination
NUT31_RS06205	COG0549	Belongs to the carbamate kinase family
NUT31_RS06215	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NUT31_RS06220	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NUT31_RS06225	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NUT31_RS06230	COG3829	transcription factor binding
NUT31_RS06250	COG1024	Enoyl-CoA hydratase
NUT31_RS06250	COG1250	3-hydroxyacyl-CoA dehydrogenase
NUT31_RS06255	COG0183	Belongs to the thiolase family
NUT31_RS06260	COG0714	Associated with various cellular activities
NUT31_RS06290	COG1595	DNA-templated transcription, initiation
NUT31_RS06310	COG2067	long-chain fatty acid transport protein
NUT31_RS06315	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
NUT31_RS06335	COG3123	guanosine phosphorylase activity
NUT31_RS06340	COG1760	l-serine dehydratase
NUT31_RS06345	COG1760	l-serine dehydratase
NUT31_RS06350	COG2951	lytic endotransglycosylase activity
NUT31_RS06355	COG3100	YcgL domain-containing protein
NUT31_RS06360	COG0850	regulation of cytokinetic process
NUT31_RS06365	COG2894	cell division
NUT31_RS06370	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
NUT31_RS06375	COG3099	Belongs to the UPF0263 family
NUT31_RS06380	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NUT31_RS06425	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
NUT31_RS06430	COG0697	spore germination
NUT31_RS06435	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
NUT31_RS06440	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NUT31_RS06450	COG0307	riboflavin synthase, alpha
NUT31_RS06460	COG0534	Mate efflux family protein
NUT31_RS06490	COG0417	DNA replication proofreading
NUT31_RS06515	COG1560	Kdo2-lipid A biosynthetic process
NUT31_RS06520	COG1560	Kdo2-lipid A biosynthetic process
NUT31_RS06530	COG0583	DNA-binding transcription factor activity
NUT31_RS06535	COG0673	inositol 2-dehydrogenase activity
NUT31_RS06540	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
NUT31_RS06555	COG0583	DNA-binding transcription factor activity
NUT31_RS06565	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
NUT31_RS06575	COG5001	Diguanylate cyclase
NUT31_RS06575	COG3300	MHYT domain
NUT31_RS06580	COG2723	6-phospho-beta-galactosidase activity
NUT31_RS06585	COG0583	DNA-binding transcription factor activity
NUT31_RS06620	COG0730	response to heat
NUT31_RS06630	COG1028	Short-chain dehydrogenase reductase Sdr
NUT31_RS06640	COG1024	Enoyl-CoA hydratase
NUT31_RS06645	COG1024	Enoyl-CoA hydratase
NUT31_RS06650	COG1960	acyl-CoA dehydrogenase activity
NUT31_RS06660	COG1960	acyl-CoA dehydrogenase activity
NUT31_RS06665	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
NUT31_RS06700	COG1584	GPR1 FUN34 yaaH family protein
NUT31_RS06715	COG1115	amino acid carrier protein
NUT31_RS06725	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
NUT31_RS06725	COG2755	lipolytic protein G-D-S-L family
NUT31_RS06735	COG1250	3-hydroxyacyl-CoA dehydrogenase
NUT31_RS06735	COG1024	Enoyl-CoA hydratase
NUT31_RS06750	COG3162	membrane
NUT31_RS06755	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NUT31_RS06760	COG0488	(ABC) transporter
NUT31_RS06765	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NUT31_RS06770	COG0776	regulation of translation
NUT31_RS06775	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
NUT31_RS06780	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NUT31_RS06785	COG0740	serine-type endopeptidase activity
NUT31_RS06790	COG0544	peptidyl-prolyl cis-trans isomerase activity
NUT31_RS06800	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
NUT31_RS06805	COG4591	ABC-type transport system involved in lipoprotein release permease component
NUT31_RS06810	COG1136	(ABC) transporter
NUT31_RS06815	COG4591	ABC-type transport system involved in lipoprotein release permease component
NUT31_RS06825	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NUT31_RS06830	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
NUT31_RS06835	COG4166	transmembrane transport
NUT31_RS06840	COG0697	spore germination
NUT31_RS06850	COG2062	phosphohistidine phosphatase, SixA
NUT31_RS06900	COG0518	GMP synthase (glutamine-hydrolyzing) activity
NUT31_RS06900	COG0519	Catalyzes the synthesis of GMP from XMP
NUT31_RS06905	COG0516	GMP reductase activity
NUT31_RS06905	COG0517	IMP dehydrogenase activity
NUT31_RS06910	COG3158	transport of potassium into the cell
NUT31_RS06930	COG0697	spore germination
NUT31_RS06935	COG1570	exodeoxyribonuclease VII activity
NUT31_RS06950	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NUT31_RS06955	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
NUT31_RS06960	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
NUT31_RS07000	COG4771	TonB-dependent receptor
NUT31_RS07005	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NUT31_RS07010	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NUT31_RS07015	COG1120	ATPase activity
NUT31_RS07025	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NUT31_RS07030	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NUT31_RS07040	COG1028	Short-chain dehydrogenase reductase Sdr
NUT31_RS07045	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NUT31_RS07050	COG3433	isochorismatase activity
NUT31_RS07050	COG1535	isochorismatase
NUT31_RS07055	COG1021	2,3-dihydroxybenzoate-AMP ligase
NUT31_RS07075	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
NUT31_RS07080	COG5001	Diguanylate cyclase
NUT31_RS07080	COG3300	MHYT domain
NUT31_RS07095	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NUT31_RS07100	COG3788	relative of glutathione S-transferase, MAPEG superfamily
NUT31_RS07105	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
NUT31_RS07110	COG0563	adenylate kinase activity
NUT31_RS07115	COG0326	Molecular chaperone. Has ATPase activity
NUT31_RS07120	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NUT31_RS07145	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
NUT31_RS07155	COG3158	transport of potassium into the cell
NUT31_RS07165	COG2223	nitrite transmembrane transporter activity
NUT31_RS07170	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NUT31_RS07180	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NUT31_RS07185	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
NUT31_RS07190	COG0651	ATP synthesis coupled electron transport
NUT31_RS07195	COG0650	Formate hydrogenlyase subunit 4
NUT31_RS07200	COG3261	NADH dehydrogenase
NUT31_RS07200	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
NUT31_RS07205	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NUT31_RS07210	COG3260	NADH ubiquinone oxidoreductase 20
NUT31_RS07220	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
NUT31_RS07230	COG1921	L-seryl-tRNASec selenium transferase activity
NUT31_RS07240	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
NUT31_RS07245	COG0298	carbon dioxide binding
NUT31_RS07255	COG0309	Hydrogenase expression formation protein (HypE)
NUT31_RS07260	COG0375	protein maturation
NUT31_RS07270	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
NUT31_RS07275	COG1124	(ABC) transporter
NUT31_RS07285	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NUT31_RS07290	COG0601	transmembrane transport
NUT31_RS07300	COG1773	rubredoxin
NUT31_RS07305	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
NUT31_RS07310	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
NUT31_RS07315	COG5557	Pfam Polysulphide reductase, NrfD
NUT31_RS07320	COG0437	4 iron, 4 sulfur cluster binding
NUT31_RS07325	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
NUT31_RS07340	COG0643	Histidine kinase
NUT31_RS07340	COG2198	Histidine kinase
NUT31_RS07345	COG0840	transmembrane signaling receptor activity
NUT31_RS07345	COG3290	protein histidine kinase activity
NUT31_RS07350	COG0835	chemotaxis
NUT31_RS07360	COG2201	protein-glutamate methylesterase activity
NUT31_RS07370	COG0840	transmembrane signaling receptor activity
NUT31_RS07390	COG0659	secondary active sulfate transmembrane transporter activity
NUT31_RS07420	COG0672	)-iron permease
NUT31_RS07440	COG2814	Major facilitator Superfamily
NUT31_RS07450	COG1136	(ABC) transporter
NUT31_RS07455	COG0577	efflux transmembrane transporter activity
NUT31_RS07480	COG0232	Belongs to the dGTPase family. Type 2 subfamily
NUT31_RS07500	COG1139	Iron-sulfur cluster binding protein
NUT31_RS07505	COG0247	lactate metabolic process
NUT31_RS07510	COG1620	l-lactate permease
NUT31_RS07515	COG0583	DNA-binding transcription factor activity
NUT31_RS07525	COG0346	lactoylglutathione lyase activity
NUT31_RS07530	COG0596	Alpha beta hydrolase
NUT31_RS07560	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NUT31_RS07565	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
NUT31_RS07565	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
NUT31_RS07570	COG0527	aspartate kinase activity
NUT31_RS07580	COG1368	sulfuric ester hydrolase activity
NUT31_RS07585	COG1619	proteins homologs of microcin C7 resistance protein MccF
NUT31_RS07590	COG4667	esterase of the alpha-beta hydrolase superfamily
NUT31_RS07600	COG0393	Putative heavy-metal-binding
NUT31_RS07620	COG1252	NADH dehydrogenase
NUT31_RS07625	COG3150	esterase
NUT31_RS07630	COG2233	PERMEase
NUT31_RS07645	COG2354	Protein conserved in bacteria
NUT31_RS07655	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NUT31_RS07660	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NUT31_RS07695	COG0537	adenosine 5'-monophosphoramidase activity
NUT31_RS07710	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
NUT31_RS07725	COG1301	dicarboxylic acid transport
NUT31_RS07735	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NUT31_RS07740	COG0861	Integral membrane protein TerC family
NUT31_RS07755	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NUT31_RS07760	COG0601	transmembrane transport
NUT31_RS07770	COG2095	MarC family integral membrane protein
NUT31_RS07780	COG1012	belongs to the aldehyde dehydrogenase family
NUT31_RS07780	COG1454	alcohol dehydrogenase
NUT31_RS07785	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
NUT31_RS07785	COG2199	diguanylate cyclase activity
NUT31_RS07790	COG3275	phosphorelay sensor kinase activity
NUT31_RS07795	COG3279	Response regulator of the LytR AlgR family
NUT31_RS07800	COG1966	Carbon starvation protein
NUT31_RS07810	COG1566	PFAM secretion protein HlyD family protein
NUT31_RS07815	COG1061	Type III restriction enzyme res subunit
NUT31_RS07820	COG2027	D-alanyl-D-alanine carboxypeptidase
NUT31_RS07825	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
NUT31_RS07835	COG0436	Aminotransferase
NUT31_RS07840	COG1288	antiporter activity
NUT31_RS07845	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
NUT31_RS07865	COG0697	spore germination
NUT31_RS07870	COG4657	Part of a membrane complex involved in electron transport
NUT31_RS07875	COG2878	Part of a membrane complex involved in electron transport
NUT31_RS07885	COG4658	electron transport chain
NUT31_RS07890	COG4659	FMN binding
NUT31_RS07895	COG4660	Part of a membrane complex involved in electron transport
NUT31_RS07900	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NUT31_RS07905	COG0346	lactoylglutathione lyase activity
NUT31_RS07920	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
NUT31_RS07925	COG2056	Na+-H+ antiporter family
NUT31_RS07935	COG2050	protein possibly involved in aromatic compounds catabolism
NUT31_RS07945	COG0247	lactate metabolic process
NUT31_RS07945	COG0277	FAD linked oxidase domain protein
NUT31_RS07955	COG1253	flavin adenine dinucleotide binding
NUT31_RS07960	COG1902	pentaerythritol trinitrate reductase activity
NUT31_RS07965	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
NUT31_RS07970	COG0647	UMP catabolic process
NUT31_RS07975	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NUT31_RS07975	COG4651	solute:proton antiporter activity
NUT31_RS07985	COG0367	asparagine synthase
NUT31_RS07995	COG0625	glutathione transferase activity
NUT31_RS08005	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
NUT31_RS08020	COG0564	pseudouridine synthase activity
NUT31_RS08025	COG5001	Diguanylate cyclase
NUT31_RS08030	COG0840	transmembrane signaling receptor activity
NUT31_RS08040	COG0392	lysyltransferase activity
NUT31_RS08040	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
NUT31_RS08045	COG2194	sulfuric ester hydrolase activity
NUT31_RS08065	COG0670	Belongs to the BI1 family
NUT31_RS08070	COG1289	transmembrane transporter activity
NUT31_RS08075	COG2920	part of a sulfur-relay system
NUT31_RS08080	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
NUT31_RS08085	COG0285	dihydrofolate synthase activity
NUT31_RS08090	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
NUT31_RS08095	COG0101	tRNA pseudouridine synthase activity
NUT31_RS08105	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NUT31_RS08110	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NUT31_RS08115	COG0671	phosphoesterase, PA-phosphatase related
NUT31_RS08120	COG1464	Belongs to the NlpA lipoprotein family
NUT31_RS08160	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NUT31_RS08160	COG0574	Belongs to the PEP-utilizing enzyme family
NUT31_RS08165	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
NUT31_RS08225	COG1242	4 iron, 4 sulfur cluster binding
NUT31_RS08230	COG0067	glutamate synthase
NUT31_RS08230	COG0070	glutamate synthase
NUT31_RS08230	COG0069	glutamate synthase activity
NUT31_RS08235	COG0493	'glutamate synthase
NUT31_RS08240	COG1126	abc transporter atp-binding protein
NUT31_RS08245	COG0765	amino acid transport
NUT31_RS08250	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NUT31_RS08265	COG0789	Transcriptional regulator
NUT31_RS08280	COG4104	PAAR repeat-containing protein
NUT31_RS08290	COG0513	Belongs to the DEAD box helicase family
NUT31_RS08295	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NUT31_RS08325	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NUT31_RS08330	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
NUT31_RS08335	COG0505	Belongs to the CarA family
NUT31_RS08340	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
NUT31_RS08350	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NUT31_RS08355	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
NUT31_RS08360	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NUT31_RS08365	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
NUT31_RS08370	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NUT31_RS08380	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
NUT31_RS08385	COG4139	cobalamin transport
NUT31_RS08390	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NUT31_RS08390	COG2205	protein histidine kinase activity
NUT31_RS08405	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
NUT31_RS08430	COG0023	Translation Initiation Factor
NUT31_RS08435	COG2119	membrane
NUT31_RS08465	COG2199	diguanylate cyclase activity
NUT31_RS08465	COG2203	Gaf domain
NUT31_RS08480	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NUT31_RS08490	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NUT31_RS08495	COG3301	Polysulphide reductase, NrfD
NUT31_RS08500	COG0437	4 iron, 4 sulfur cluster binding
NUT31_RS08505	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
NUT31_RS08575	COG0322	excinuclease ABC activity
NUT31_RS08580	COG2197	response regulator
NUT31_RS08585	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
NUT31_RS08590	COG2835	tetraacyldisaccharide 4'-kinase activity
NUT31_RS08595	COG1663	tetraacyldisaccharide 4'-kinase activity
NUT31_RS08605	COG2333	competence protein COMEC
NUT31_RS08605	COG0658	competence protein
NUT31_RS08620	COG0433	COG0433 Predicted ATPase
NUT31_RS08625	COG1448	Aminotransferase
NUT31_RS08640	COG1199	ATP-dependent helicase activity
NUT31_RS08650	COG0123	including yeast histone deacetylase and acetoin utilization protein
NUT31_RS08655	COG0477	Major facilitator Superfamily
NUT31_RS08660	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
NUT31_RS08685	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NUT31_RS08700	COG2271	Major facilitator Superfamily
NUT31_RS08710	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NUT31_RS08715	COG0765	amino acid transport
NUT31_RS08720	COG1126	abc transporter atp-binding protein
NUT31_RS08740	COG0531	amino acid
NUT31_RS08755	COG1253	flavin adenine dinucleotide binding
NUT31_RS08760	COG0704	Plays a role in the regulation of phosphate uptake
NUT31_RS08765	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
NUT31_RS08770	COG0581	inorganic phosphate transmembrane transporter activity
NUT31_RS08775	COG0573	inorganic phosphate transmembrane transporter activity
NUT31_RS08780	COG0590	tRNA wobble adenosine to inosine editing
NUT31_RS08795	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
NUT31_RS08815	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
NUT31_RS08820	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
NUT31_RS08825	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NUT31_RS08830	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NUT31_RS08855	COG2716	regulation of RNA biosynthetic process
NUT31_RS08860	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NUT31_RS08870	COG2239	Acts as a magnesium transporter
NUT31_RS08880	COG1256	bacterial-type flagellum assembly
NUT31_RS08885	COG1705	Flagellar rod assembly protein muramidase FlgJ
NUT31_RS08885	COG3951	Flagellar rod assembly protein muramidase FlgJ
NUT31_RS08890	COG1706	bacterial-type flagellum-dependent cell motility
NUT31_RS08895	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
NUT31_RS08905	COG4787	bacterial-type flagellum-dependent cell motility
NUT31_RS08925	COG1815	bacterial-type flagellum-dependent cell motility
NUT31_RS08930	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
NUT31_RS08935	COG0784	Response regulator, receiver
NUT31_RS08935	COG0835	chemotaxis
NUT31_RS08940	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
NUT31_RS08955	COG0622	Phosphoesterase
NUT31_RS08985	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NUT31_RS08990	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NUT31_RS08995	COG1882	Formate acetyltransferase
NUT31_RS09000	COG1349	DNA-binding transcription factor activity
NUT31_RS09005	COG0697	spore germination
NUT31_RS09035	COG1278	Cold shock
NUT31_RS09075	COG3132	Protein of unknown function, DUF480
NUT31_RS09095	COG1091	dTDP-4-dehydrorhamnose reductase activity
NUT31_RS09105	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
NUT31_RS09115	COG1216	Glycosyl transferase, family 2
NUT31_RS09135	COG1442	glycosyl transferase family 8
NUT31_RS09135	COG1216	Glycosyl transferase, family 2
NUT31_RS09140	COG2244	polysaccharide biosynthetic process
NUT31_RS09160	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
NUT31_RS09175	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NUT31_RS09180	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NUT31_RS09185	COG1309	transcriptional regulator
NUT31_RS09200	COG1946	Acyl-CoA thioesterase
NUT31_RS09210	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NUT31_RS09220	COG0009	L-threonylcarbamoyladenylate synthase
NUT31_RS09230	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
NUT31_RS09235	COG0512	Glutamine amidotransferase of anthranilate synthase
NUT31_RS09235	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NUT31_RS09240	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NUT31_RS09245	COG0135	phosphoribosylanthranilate isomerase activity
NUT31_RS09245	COG0134	indole-3-glycerol-phosphate synthase activity
NUT31_RS09250	COG0133	tryptophan synthase activity
NUT31_RS09255	COG0159	tryptophan synthase activity
NUT31_RS09280	COG1988	membrane-bound metal-dependent
NUT31_RS09300	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NUT31_RS09310	COG4521	taurine ABC transporter
NUT31_RS09315	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
NUT31_RS09320	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NUT31_RS09325	COG2175	clavaminate synthase activity
NUT31_RS09335	COG2814	Major facilitator Superfamily
NUT31_RS09340	COG0109	protoheme IX farnesyltransferase activity
NUT31_RS09345	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
NUT31_RS09350	COG1845	cytochrome c oxidase, subunit III
NUT31_RS09355	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
NUT31_RS09360	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
NUT31_RS09405	COG2211	Major facilitator Superfamily
NUT31_RS09420	COG0708	Exodeoxyribonuclease III
NUT31_RS09440	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NUT31_RS09445	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NUT31_RS09465	COG0095	Lipoate-protein ligase
NUT31_RS09505	COG0446	pyridine nucleotide-disulphide oxidoreductase
NUT31_RS09515	COG1285	pathogenesis
NUT31_RS09545	COG0484	heat shock protein binding
NUT31_RS09550	COG0443	Heat shock 70 kDa protein
NUT31_RS09555	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NUT31_RS09560	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NUT31_RS09565	COG0497	DNA recombination
NUT31_RS09580	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NUT31_RS09585	COG1136	(ABC) transporter
NUT31_RS09585	COG0577	efflux transmembrane transporter activity
NUT31_RS09595	COG2375	cellular response to nickel ion
NUT31_RS09600	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NUT31_RS09630	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NUT31_RS09635	COG1396	sequence-specific DNA binding
NUT31_RS09635	COG1917	Cupin 2, conserved barrel domain protein
NUT31_RS09655	COG0531	amino acid
NUT31_RS09665	COG0531	amino acid
NUT31_RS09675	COG1283	sodium-dependent phosphate transmembrane transporter activity
NUT31_RS09685	COG3384	dioxygenase
NUT31_RS09690	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NUT31_RS09690	COG2205	protein histidine kinase activity
NUT31_RS09705	COG0813	purine-nucleoside phosphorylase activity
NUT31_RS09720	COG0488	(ABC) transporter
NUT31_RS09735	COG4319	ketosteroid isomerase
NUT31_RS09740	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
NUT31_RS09745	COG0083	homoserine kinase activity
NUT31_RS09755	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
NUT31_RS09760	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
NUT31_RS09775	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NUT31_RS09785	COG0745	RESPONSE REGULATOR receiver
NUT31_RS09800	COG4988	ABC transporter
NUT31_RS09805	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
NUT31_RS09825	COG1720	tRNA m6t6A37 methyltransferase activity
NUT31_RS09830	COG2770	Histidine kinase
NUT31_RS09830	COG3437	response regulator, receiver
NUT31_RS09845	COG0542	response to heat
NUT31_RS09850	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
NUT31_RS09855	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NUT31_RS09865	COG2190	(PTS) system
NUT31_RS09880	COG3038	cytochrome b561
NUT31_RS09890	COG0419	ATPase involved in DNA repair
NUT31_RS09895	COG0420	3'-5' exonuclease activity
NUT31_RS09905	COG2974	May be involved in recombination
NUT31_RS09915	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NUT31_RS09915	COG4651	solute:proton antiporter activity
NUT31_RS09930	COG0469	pyruvate kinase activity
NUT31_RS09935	COG1196	nuclear chromosome segregation
NUT31_RS09935	COG3264	Mechanosensitive ion channel
NUT31_RS09945	COG2706	6-phosphogluconolactonase activity
NUT31_RS09965	COG0281	malic enzyme
NUT31_RS09980	COG0437	4 iron, 4 sulfur cluster binding
NUT31_RS09985	COG3383	formate dehydrogenase (NAD+) activity
NUT31_RS09985	COG3383	formate dehydrogenase (NAD+) activity
NUT31_RS10020	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
NUT31_RS10025	COG1910	domain protein
NUT31_RS10030	COG3852	Histidine kinase
NUT31_RS10035	COG2204	response regulator
NUT31_RS10045	COG4662	Binding-protein-dependent transport system inner membrane component
NUT31_RS10055	COG0746	molybdenum cofactor guanylyltransferase activity
NUT31_RS10060	COG0303	'Molybdopterin
NUT31_RS10065	COG1289	transmembrane transporter activity
NUT31_RS10070	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
NUT31_RS10105	COG3220	belongs to the UPF0276 family
NUT31_RS10135	COG2205	protein histidine kinase activity
NUT31_RS10135	COG0784	Response regulator, receiver
NUT31_RS10140	COG4166	transmembrane transport
NUT31_RS10145	COG0601	transmembrane transport
NUT31_RS10150	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NUT31_RS10155	COG0444	Belongs to the ABC transporter superfamily
NUT31_RS10160	COG4608	Belongs to the ABC transporter superfamily
NUT31_RS10170	COG2971	BadF BadG BcrA BcrD
NUT31_RS10180	COG0840	transmembrane signaling receptor activity
NUT31_RS10200	COG3724	N-succinylarginine dihydrolase activity
NUT31_RS10205	COG0616	signal peptide processing
NUT31_RS10210	COG1028	Short-chain dehydrogenase reductase Sdr
NUT31_RS10215	COG0583	DNA-binding transcription factor activity
NUT31_RS10225	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
NUT31_RS10235	COG0583	DNA-binding transcription factor activity
NUT31_RS10240	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NUT31_RS10245	COG1881	PFAM PEBP family protein
NUT31_RS10255	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
NUT31_RS10255	COG3408	Glycogen debranching enzyme
NUT31_RS10260	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NUT31_RS10265	COG0739	heme binding
NUT31_RS10270	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
NUT31_RS10290	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
NUT31_RS10300	COG3091	SprT-like family
NUT31_RS10310	COG1385	rRNA (uridine-N3-)-methyltransferase activity
NUT31_RS10315	COG0189	ligase activity
NUT31_RS10325	COG1678	Uncharacterized ACR, COG1678
NUT31_RS10330	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NUT31_RS10335	COG3104	oligopeptide transport
NUT31_RS10345	COG0714	Associated with various cellular activities
NUT31_RS10360	COG1115	amino acid carrier protein
NUT31_RS10365	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NUT31_RS10380	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NUT31_RS10390	COG1301	dicarboxylic acid transport
NUT31_RS10395	COG2877	3-deoxy-8-phosphooctulonate synthase activity
NUT31_RS10400	COG2912	Transglutaminase-like superfamily
NUT31_RS10410	COG2890	protein-(glutamine-N5) methyltransferase activity
NUT31_RS10415	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NUT31_RS10420	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
NUT31_RS10425	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
NUT31_RS10430	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
NUT31_RS10440	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NUT31_RS10445	COG0737	Belongs to the 5'-nucleotidase family
NUT31_RS10450	COG0193	aminoacyl-tRNA hydrolase activity
NUT31_RS10455	COG0012	GTP binding
NUT31_RS10500	COG0471	metal ion transport
NUT31_RS10500	COG0490	domain, Protein
NUT31_RS10510	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
NUT31_RS10530	COG0366	Alpha amylase catalytic
NUT31_RS10540	COG0674	pyruvate-flavodoxin oxidoreductase activity
NUT31_RS10540	COG1013	pyruvate-flavodoxin oxidoreductase activity
NUT31_RS10540	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
NUT31_RS10540	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NUT31_RS10550	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NUT31_RS10560	COG1012	belongs to the aldehyde dehydrogenase family
NUT31_RS10570	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NUT31_RS10585	COG0180	Tryptophanyl-tRNA synthetase
NUT31_RS10595	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
NUT31_RS10600	COG0338	D12 class N6 adenine-specific DNA methyltransferase
NUT31_RS10610	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
NUT31_RS10615	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
NUT31_RS10645	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
NUT31_RS10650	COG0583	DNA-binding transcription factor activity
NUT31_RS10670	COG0583	DNA-binding transcription factor activity
NUT31_RS10685	COG0739	heme binding
NUT31_RS10695	COG3264	Mechanosensitive ion channel
NUT31_RS10695	COG1511	domain protein
NUT31_RS10700	COG0584	glycerophosphoryl diester phosphodiesterase
NUT31_RS10710	COG1053	succinate dehydrogenase
NUT31_RS10715	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
NUT31_RS10720	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
NUT31_RS10745	COG3214	Protein conserved in bacteria
NUT31_RS10750	COG4106	trans-aconitate 2-methyltransferase activity
NUT31_RS10785	COG0642	Histidine kinase
NUT31_RS10795	COG0516	GMP reductase activity
NUT31_RS10805	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NUT31_RS10810	COG3647	Membrane
NUT31_RS10820	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NUT31_RS10840	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NUT31_RS10850	COG0583	DNA-binding transcription factor activity
NUT31_RS10855	COG3706	GGDEF domain
NUT31_RS10865	COG1335	isochorismatase
NUT31_RS10870	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NUT31_RS10875	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NUT31_RS10880	COG1702	phosphate starvation-inducible protein PhoH
NUT31_RS10885	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NUT31_RS10890	COG4535	Mg2 and Co2 transporter CorC
NUT31_RS10895	COG0815	Transfers the fatty acyl group on membrane lipoproteins
NUT31_RS10900	COG2888	peptidyl-tyrosine sulfation
NUT31_RS10905	COG0495	leucyl-tRNA aminoacylation
NUT31_RS10920	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NUT31_RS10925	COG0799	negative regulation of ribosome biogenesis
NUT31_RS10930	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
NUT31_RS10935	COG0768	penicillin binding
NUT31_RS10940	COG0772	Belongs to the SEDS family
NUT31_RS10945	COG2951	lytic endotransglycosylase activity
NUT31_RS10950	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
NUT31_RS10955	COG1686	Belongs to the peptidase S11 family
NUT31_RS10960	COG2921	Belongs to the UPF0250 family
NUT31_RS10965	COG0321	lipoyl(octanoyl) transferase activity
NUT31_RS10970	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
NUT31_RS10980	COG3545	Serine hydrolase
NUT31_RS10985	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NUT31_RS11000	COG0789	Transcriptional regulator
NUT31_RS11010	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NUT31_RS11015	COG1970	mechanosensitive ion channel activity
NUT31_RS11020	COG4974	Belongs to the 'phage' integrase family
NUT31_RS11030	COG0312	modulator of DNA gyrase
NUT31_RS11035	COG0312	modulator of DNA gyrase
NUT31_RS11100	COG3275	phosphorelay sensor kinase activity
NUT31_RS11105	COG3279	Response regulator of the LytR AlgR family
NUT31_RS11110	COG1966	Carbon starvation protein
NUT31_RS11120	COG0114	fumarate hydratase activity
NUT31_RS11130	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
NUT31_RS11135	COG3706	GGDEF domain
NUT31_RS11140	COG2211	Major facilitator Superfamily
NUT31_RS11145	COG1185	polyribonucleotide nucleotidyltransferase activity
NUT31_RS11150	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NUT31_RS11155	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NUT31_RS11160	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NUT31_RS11165	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NUT31_RS11170	COG0195	Participates in both transcription termination and antitermination
NUT31_RS11175	COG0779	Required for maturation of 30S ribosomal subunits
NUT31_RS11190	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
NUT31_RS11195	COG0149	triose-phosphate isomerase activity
NUT31_RS11200	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NUT31_RS11205	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NUT31_RS11215	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
NUT31_RS11220	COG1534	Rna-binding protein
NUT31_RS11235	COG1360	Flagellar Motor Protein
NUT31_RS11235	COG1360	Flagellar Motor Protein
NUT31_RS11240	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
NUT31_RS11245	COG1722	exodeoxyribonuclease VII activity
NUT31_RS11250	COG0142	geranyltranstransferase activity
NUT31_RS11255	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NUT31_RS11265	COG0601	transmembrane transport
NUT31_RS11275	COG4172	Belongs to the ABC transporter superfamily
NUT31_RS11280	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
NUT31_RS11285	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
NUT31_RS11290	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NUT31_RS11295	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
NUT31_RS11315	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NUT31_RS11315	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NUT31_RS11320	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
NUT31_RS11330	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
NUT31_RS11345	COG3381	protein complex oligomerization
NUT31_RS11365	COG3300	MHYT domain
NUT31_RS11365	COG5001	Diguanylate cyclase
NUT31_RS11375	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NUT31_RS11380	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
NUT31_RS11385	COG0511	ligase activity, forming carbon-carbon bonds
NUT31_RS11390	COG0439	Biotin carboxylase
NUT31_RS11400	COG4145	pantothenate transmembrane transporter activity
NUT31_RS11405	COG1263	PTS System
NUT31_RS11405	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NUT31_RS11405	COG2190	(PTS) system
NUT31_RS11410	COG0583	DNA-binding transcription factor activity
NUT31_RS11415	COG0604	alcohol dehydrogenase
NUT31_RS11420	COG2264	protein methyltransferase activity
NUT31_RS11445	COG0778	Nitroreductase
NUT31_RS11450	COG1902	pentaerythritol trinitrate reductase activity
NUT31_RS11450	COG0446	pyridine nucleotide-disulphide oxidoreductase
NUT31_RS11455	COG0616	signal peptide processing
NUT31_RS11475	COG3139	Protein of unknown function (DUF1315)
NUT31_RS11480	COG0252	asparaginase activity
NUT31_RS11485	COG0786	glutamate:sodium symporter activity
NUT31_RS11500	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
NUT31_RS11505	COG0384	phenazine biosynthesis protein PhzF
NUT31_RS11510	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
NUT31_RS11515	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NUT31_RS11520	COG0175	sulfate reduction
NUT31_RS11525	COG2113	Glycine betaine
NUT31_RS11530	COG4176	ABC-type proline glycine betaine transport system permease component
NUT31_RS11535	COG4175	Glycine betaine
NUT31_RS11545	COG3610	response to peptide
NUT31_RS11550	COG2966	Psort location CytoplasmicMembrane, score
NUT31_RS11560	COG0521	Mo-molybdopterin cofactor biosynthetic process
NUT31_RS11570	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
NUT31_RS11575	COG1028	Short-chain dehydrogenase reductase Sdr
NUT31_RS11585	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
NUT31_RS11610	COG2986	histidine ammonia-lyase
NUT31_RS11635	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NUT31_RS11640	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NUT31_RS11675	COG1858	cytochrome C peroxidase
NUT31_RS11690	COG2313	pseudouridylate synthase activity
NUT31_RS11695	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NUT31_RS11735	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NUT31_RS11750	COG1073	alpha beta
NUT31_RS11755	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
NUT31_RS11760	COG2195	Cleaves the N-terminal amino acid of tripeptides
NUT31_RS11765	COG4608	Belongs to the ABC transporter superfamily
NUT31_RS11770	COG0444	Belongs to the ABC transporter superfamily
NUT31_RS11780	COG4239	(ABC) transporter, permease
NUT31_RS11785	COG4174	ABC transporter (Permease)
NUT31_RS11800	COG0811	peptide transport
NUT31_RS11805	COG0811	peptide transport
NUT31_RS11810	COG0848	biopolymer transport protein
NUT31_RS11860	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NUT31_RS11865	COG0840	transmembrane signaling receptor activity
NUT31_RS11875	COG1278	Cold shock
NUT31_RS11895	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
NUT31_RS11900	COG1162	GTPase activity
NUT31_RS11905	COG0688	phosphatidylethanolamine metabolic process
NUT31_RS11910	COG4628	conserved protein (DUF2132)
NUT31_RS11930	COG3300	MHYT domain
NUT31_RS11930	COG5001	Diguanylate cyclase
NUT31_RS11935	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
NUT31_RS12015	COG4974	Belongs to the 'phage' integrase family
NUT31_RS12040	COG0582	viral genome integration into host DNA
NUT31_RS12065	COG1132	(ABC) transporter
NUT31_RS12075	COG2897	thiosulfate sulfurtransferase activity
NUT31_RS12080	COG2066	Belongs to the glutaminase family
NUT31_RS12085	COG3171	Protein conserved in bacteria
NUT31_RS12090	COG0220	tRNA (guanine-N7-)-methyltransferase activity
NUT31_RS12095	COG2234	aminopeptidase activity
NUT31_RS12095	COG4935	Belongs to the peptidase S8 family
NUT31_RS12100	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NUT31_RS12105	COG2200	EAL domain
NUT31_RS12110	COG1090	epimerase
NUT31_RS12115	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
NUT31_RS12120	COG4181	ATPase activity
NUT31_RS12125	COG2755	lipolytic protein G-D-S-L family
NUT31_RS12130	COG0835	chemotaxis
NUT31_RS12130	COG0784	Response regulator, receiver
NUT31_RS12140	COG0569	domain protein
NUT31_RS12140	COG2985	domain, Protein
NUT31_RS12145	COG1272	protein, Hemolysin III
NUT31_RS12150	COG0076	glutamate decarboxylase activity
NUT31_RS12155	COG2917	probably involved in intracellular septation
NUT31_RS12160	COG2350	Protein conserved in bacteria
NUT31_RS12170	COG1555	photosystem II stabilization
NUT31_RS12175	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NUT31_RS12180	COG3104	oligopeptide transport
NUT31_RS12185	COG0745	RESPONSE REGULATOR receiver
NUT31_RS12215	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NUT31_RS12225	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NUT31_RS12230	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
NUT31_RS12235	COG1280	lysine exporter protein (LysE YggA)
NUT31_RS12260	COG0316	Belongs to the HesB IscA family
NUT31_RS12270	COG0038	chloride channel
NUT31_RS12275	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
NUT31_RS12290	COG0671	phosphoesterase, PA-phosphatase related
NUT31_RS12300	COG3437	response regulator, receiver
NUT31_RS12300	COG0784	Response regulator, receiver
NUT31_RS12310	COG2076	Multidrug Resistance protein
NUT31_RS12320	COG0346	lactoylglutathione lyase activity
NUT31_RS12325	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NUT31_RS12330	COG1643	Atp-dependent helicase
NUT31_RS12340	COG1489	DNA binding
NUT31_RS12345	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
NUT31_RS12350	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NUT31_RS12365	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
NUT31_RS12370	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
NUT31_RS12375	COG1823	symporter activity
NUT31_RS12395	COG1924	4 iron, 4 sulfur cluster binding
NUT31_RS12400	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
NUT31_RS12405	COG0842	Transport permease protein
NUT31_RS12410	COG1131	(ABC) transporter
NUT31_RS12425	COG0163	prenyltransferase activity
NUT31_RS12430	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NUT31_RS12435	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
NUT31_RS12450	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
NUT31_RS12500	COG0529	Catalyzes the synthesis of activated sulfate
NUT31_RS12505	COG0471	metal ion transport
NUT31_RS12505	COG3273	potassium ion transport
NUT31_RS12510	COG2895	sulfate adenylyltransferase (ATP) activity
NUT31_RS12515	COG0175	sulfate reduction
NUT31_RS12520	COG1648	precorrin-2 dehydrogenase activity
NUT31_RS12520	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NUT31_RS12525	COG0330	HflC and HflK could
NUT31_RS12530	COG1585	Membrane protein implicated in regulation of membrane protease activity
NUT31_RS12535	COG0517	IMP dehydrogenase activity
NUT31_RS12535	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
NUT31_RS12540	COG0488	(ABC) transporter
NUT31_RS12550	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
NUT31_RS12555	COG0583	DNA-binding transcription factor activity
NUT31_RS12595	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NUT31_RS12605	COG0668	transmembrane transport
NUT31_RS12615	COG2731	YhcH YjgK YiaL family protein
NUT31_RS12625	COG2132	Multicopper oxidase
NUT31_RS12625	COG2132	Multicopper oxidase
NUT31_RS12635	COG1794	racemase activity, acting on amino acids and derivatives
NUT31_RS12650	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NUT31_RS12675	COG0733	neurotransmitter:sodium symporter activity
NUT31_RS12685	COG0733	neurotransmitter:sodium symporter activity
NUT31_RS12700	COG0561	phosphatase activity
NUT31_RS12735	COG1846	Transcriptional regulator
NUT31_RS12740	COG1764	response to oxidative stress
NUT31_RS12745	COG2130	NADP-dependent
NUT31_RS12750	COG1051	belongs to the nudix hydrolase family
NUT31_RS12770	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
NUT31_RS12775	COG1640	4-alpha-glucanotransferase
NUT31_RS12780	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NUT31_RS12785	COG0676	glucose-6-phosphate 1-epimerase activity
NUT31_RS12790	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
NUT31_RS12795	COG0840	transmembrane signaling receptor activity
NUT31_RS12870	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
NUT31_RS12875	COG2885	chlorophyll binding
NUT31_RS12880	COG0823	Involved in the tonB-independent uptake of proteins
NUT31_RS12895	COG0811	peptide transport
NUT31_RS12900	COG0824	Thioesterase
NUT31_RS12905	COG3790	cyd operon protein YbgE
NUT31_RS12910	COG4890	Cyd operon protein YbgT
NUT31_RS12915	COG1294	oxidase, subunit
NUT31_RS12920	COG1271	oxidase subunit
NUT31_RS12925	COG2255	four-way junction helicase activity
NUT31_RS12930	COG0632	four-way junction helicase activity
NUT31_RS12935	COG0840	transmembrane signaling receptor activity
NUT31_RS12940	COG0442	prolyl-tRNA aminoacylation
NUT31_RS12945	COG4221	oxidoreductase activity
NUT31_RS12960	COG1024	Enoyl-CoA hydratase
NUT31_RS12980	COG4166	transmembrane transport
NUT31_RS12995	COG1872	DUF167
NUT31_RS13000	COG0762	integral membrane protein
NUT31_RS13005	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NUT31_RS13010	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NUT31_RS13025	COG3022	response to hydroperoxide
NUT31_RS13030	COG0513	Belongs to the DEAD box helicase family
NUT31_RS13035	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
NUT31_RS13060	COG0735	belongs to the Fur family
NUT31_RS13100	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NUT31_RS13115	COG0776	regulation of translation
NUT31_RS13125	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
NUT31_RS13150	COG0560	Phosphoserine phosphatase
NUT31_RS13160	COG3447	MASE1 domain protein
NUT31_RS13160	COG5001	Diguanylate cyclase
NUT31_RS13160	COG5002	protein histidine kinase activity
NUT31_RS13165	COG0813	purine-nucleoside phosphorylase activity
NUT31_RS13170	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
NUT31_RS13175	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
NUT31_RS13180	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NUT31_RS13190	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NUT31_RS13195	COG0084	hydrolase, TatD family'
NUT31_RS13200	COG2165	general secretion pathway protein
NUT31_RS13210	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NUT31_RS13215	COG0004	ammonium transporteR
NUT31_RS13230	COG0795	lipopolysaccharide-transporting ATPase activity
NUT31_RS13235	COG0795	lipopolysaccharide-transporting ATPase activity
NUT31_RS13240	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
NUT31_RS13245	COG2927	DNA polymerase III (CHI subunit)
NUT31_RS13250	COG0525	valine-tRNA ligase activity
NUT31_RS13255	COG1253	flavin adenine dinucleotide binding
NUT31_RS13260	COG0586	Pfam SNARE associated Golgi protein
NUT31_RS13265	COG1686	Belongs to the peptidase S11 family
NUT31_RS13300	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
NUT31_RS13305	COG0527	aspartate kinase activity
NUT31_RS13310	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NUT31_RS13320	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NUT31_RS13325	COG1546	Belongs to the CinA family
NUT31_RS13330	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
NUT31_RS13350	COG3068	Protein conserved in bacteria
NUT31_RS13360	COG0739	heme binding
NUT31_RS13380	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
NUT31_RS13385	COG1121	(ABC) transporter
NUT31_RS13390	COG1108	ABC-type Mn2 Zn2 transport systems permease components
NUT31_RS13395	COG0583	DNA-binding transcription factor activity
NUT31_RS13400	COG0697	spore germination
NUT31_RS13405	COG1573	uracil-dna glycosylase
NUT31_RS13410	COG2962	Rard protein
NUT31_RS13420	COG2827	Endonuclease containing a URI domain
NUT31_RS13435	COG1842	Phage shock protein A
NUT31_RS13440	COG0204	Acyl-transferase
NUT31_RS13460	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NUT31_RS13510	COG0583	DNA-binding transcription factor activity
NUT31_RS13530	COG1289	transmembrane transporter activity
NUT31_RS13535	COG1566	PFAM secretion protein HlyD family protein
NUT31_RS13550	COG1051	belongs to the nudix hydrolase family
NUT31_RS13555	COG3150	esterase
NUT31_RS13565	COG3151	Protein conserved in bacteria
NUT31_RS13570	COG0494	nUDIX hydrolase
NUT31_RS13575	COG1538	Outer membrane efflux protein
NUT31_RS13580	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
NUT31_RS13580	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
NUT31_RS13585	COG1560	Kdo2-lipid A biosynthetic process
NUT31_RS13600	COG1392	Phosphate transport regulator
NUT31_RS13605	COG0306	phosphate transporter
NUT31_RS13610	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NUT31_RS13645	COG0583	DNA-binding transcription factor activity
NUT31_RS13650	COG1380	Effector of murein hydrolase LrgA
NUT31_RS13655	COG1346	cytolysis
NUT31_RS13670	COG0617	tRNA 3'-terminal CCA addition
NUT31_RS13675	COG3267	Type II secretory pathway component ExeA
NUT31_RS13675	COG3409	Peptidoglycan-binding domain 1 protein
NUT31_RS13685	COG1194	a g-specific adenine glycosylase
NUT31_RS13690	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
NUT31_RS13700	COG3111	PFAM Bacterial OB fold (BOF) protein
NUT31_RS13705	COG3240	lipase activity
NUT31_RS13720	COG3009	Protein conserved in bacteria
NUT31_RS13725	COG3008	intermembrane lipid transfer
NUT31_RS13725	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
NUT31_RS13730	COG2995	paraquat-inducible protein a
NUT31_RS13740	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NUT31_RS13750	COG3706	GGDEF domain
NUT31_RS13750	COG4251	negative regulation of phosphorylation
NUT31_RS13750	COG5001	Diguanylate cyclase
NUT31_RS13750	COG2203	Gaf domain
NUT31_RS13755	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NUT31_RS13760	COG2813	Specifically methylates the guanine in position
NUT31_RS13765	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
NUT31_RS13770	COG0297	glycogen (starch) synthase activity
NUT31_RS13810	COG1757	Na H antiporter
NUT31_RS13815	COG0583	DNA-binding transcription factor activity
NUT31_RS13820	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
NUT31_RS13825	COG3842	ATPase activity
NUT31_RS13830	COG1176	ABC-type spermidine putrescine transport system, permease component I
NUT31_RS13835	COG1177	transmembrane transport
NUT31_RS13840	COG1012	belongs to the aldehyde dehydrogenase family
NUT31_RS13850	COG0110	maltose O-acetyltransferase activity
NUT31_RS13855	COG0366	Alpha amylase catalytic
NUT31_RS13860	COG1263	PTS System
NUT31_RS13860	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NUT31_RS13880	COG0252	asparaginase activity
NUT31_RS13895	COG1803	Methylglyoxal synthase
NUT31_RS13920	COG1444	tRNA N-acetyltransferase activity
NUT31_RS13930	COG0835	chemotaxis
NUT31_RS13930	COG0784	Response regulator, receiver
NUT31_RS13935	COG3314	Sporulation integral membrane protein YlbJ
NUT31_RS13970	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
NUT31_RS13975	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NUT31_RS13990	COG0477	Major facilitator Superfamily
NUT31_RS13995	COG0523	cobalamin synthesis protein
NUT31_RS14005	COG1280	lysine exporter protein (LysE YggA)
NUT31_RS14015	COG1049	propionate catabolic process, 2-methylcitrate cycle
NUT31_RS14020	COG1752	Esterase of the alpha-beta hydrolase superfamily
NUT31_RS14025	COG0840	transmembrane signaling receptor activity
NUT31_RS14030	COG0840	transmembrane signaling receptor activity
NUT31_RS14040	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NUT31_RS14045	COG0508	dehydrogenase complex catalyzes the overall conversion of
NUT31_RS14050	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
NUT31_RS14055	COG2186	Transcriptional regulator
NUT31_RS14080	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NUT31_RS14085	COG1459	type II secretion system
NUT31_RS14100	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
NUT31_RS14105	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
NUT31_RS14110	COG0494	nUDIX hydrolase
NUT31_RS14120	COG0653	protein targeting
NUT31_RS14130	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
NUT31_RS14135	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NUT31_RS14140	COG0849	cell division
NUT31_RS14145	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
NUT31_RS14150	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NUT31_RS14155	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NUT31_RS14160	COG0772	Belongs to the SEDS family
NUT31_RS14165	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NUT31_RS14170	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NUT31_RS14175	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
NUT31_RS14185	COG0768	penicillin binding
NUT31_RS14190	COG3116	cell division
NUT31_RS14195	COG0275	rRNA processing
NUT31_RS14200	COG2001	Belongs to the MraZ family
NUT31_RS14210	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
NUT31_RS14215	COG3107	peptidoglycan biosynthetic process
NUT31_RS14220	COG0792	nuclease activity
NUT31_RS14225	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
NUT31_RS14230	COG2823	Periplasmic or secreted lipoprotein
NUT31_RS14235	COG2969	positive regulation of protein catabolic process
NUT31_RS14240	COG0625	glutathione transferase activity
NUT31_RS14245	COG2857	Cytochrome c1
NUT31_RS14250	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
NUT31_RS14255	COG0723	plastoquinol--plastocyanin reductase activity
NUT31_RS14260	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
NUT31_RS14265	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NUT31_RS14270	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
NUT31_RS14280	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NUT31_RS14285	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NUT31_RS14315	COG3964	amidohydrolase
NUT31_RS14330	COG3711	transcriptional antiterminator
NUT31_RS14330	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NUT31_RS14335	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NUT31_RS14340	COG1660	Displays ATPase and GTPase activities
NUT31_RS14345	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NUT31_RS14355	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
NUT31_RS14360	COG1137	ATPase activity
NUT31_RS14365	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
NUT31_RS14370	COG3117	lipopolysaccharide transmembrane transporter activity
NUT31_RS14375	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
NUT31_RS14380	COG0517	IMP dehydrogenase activity
NUT31_RS14380	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
NUT31_RS14385	COG1127	ABC transporter
NUT31_RS14390	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
NUT31_RS14395	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
NUT31_RS14400	COG2854	intermembrane phospholipid transfer
NUT31_RS14410	COG5007	Belongs to the BolA IbaG family
NUT31_RS14415	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NUT31_RS14420	COG0312	modulator of DNA gyrase
NUT31_RS14425	COG3028	Belongs to the UPF0307 family
NUT31_RS14435	COG2926	Belongs to the UPF0265 family
NUT31_RS14465	COG1396	sequence-specific DNA binding
NUT31_RS14470	COG3135	benzoate transporter
NUT31_RS14500	COG3047	cAMP biosynthetic process
NUT31_RS14510	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NUT31_RS14515	COG2197	response regulator
NUT31_RS14520	COG0629	single-stranded DNA binding
NUT31_RS14545	COG1278	Cold shock
NUT31_RS14550	COG4771	TonB-dependent receptor
NUT31_RS14555	COG3706	GGDEF domain
NUT31_RS14595	COG0346	lactoylglutathione lyase activity
NUT31_RS14605	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
NUT31_RS14610	COG1074	ATP-dependent DNA helicase activity
NUT31_RS14615	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
NUT31_RS14620	COG2259	Doxx family
NUT31_RS14625	COG1741	Belongs to the pirin family
NUT31_RS14635	COG0583	DNA-binding transcription factor activity
NUT31_RS14660	COG1175	transmembrane transport
NUT31_RS14670	COG3842	ATPase activity
NUT31_RS14680	COG2199	diguanylate cyclase activity
NUT31_RS14680	COG2203	Gaf domain
NUT31_RS14700	COG1247	-acetyltransferase
NUT31_RS14705	COG0753	catalase activity
NUT31_RS14730	COG0671	phosphoesterase, PA-phosphatase related
NUT31_RS14735	COG0628	permease
NUT31_RS14740	COG4221	oxidoreductase activity
NUT31_RS14745	COG2957	Belongs to the agmatine deiminase family
NUT31_RS14755	COG3284	Transcriptional regulator
NUT31_RS14770	COG1461	Dihydroxyacetone kinase
NUT31_RS14775	COG2376	Dihydroxyacetone kinase
NUT31_RS14780	COG2252	PERMEase
NUT31_RS14820	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
NUT31_RS14825	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NUT31_RS14830	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NUT31_RS14835	COG0049	tRNA binding
NUT31_RS14840	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NUT31_RS14845	COG2168	tRNA wobble position uridine thiolation
NUT31_RS14850	COG2923	Belongs to the DsrF TusC family
NUT31_RS14860	COG0251	oxidation-reduction process
NUT31_RS14865	COG2964	Protein conserved in bacteria
NUT31_RS14870	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NUT31_RS14875	COG0085	RNA polymerase activity
NUT31_RS14880	COG0222	ribosome binding
NUT31_RS14885	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NUT31_RS14890	COG0081	regulation of translation
NUT31_RS14895	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
NUT31_RS14900	COG0250	Participates in transcription elongation, termination and antitermination
NUT31_RS14915	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NUT31_RS14940	COG0812	UDP-N-acetylmuramate dehydrogenase activity
NUT31_RS14945	COG0569	domain protein
NUT31_RS14950	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
NUT31_RS14970	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NUT31_RS14975	COG3005	denitrification pathway
NUT31_RS14980	COG0243	molybdopterin cofactor binding
NUT31_RS15010	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
NUT31_RS15025	COG2204	response regulator
NUT31_RS15035	COG2205	protein histidine kinase activity
NUT31_RS15060	COG5413	integral membrane protein
NUT31_RS15070	COG1522	sequence-specific DNA binding
NUT31_RS15075	COG2502	aspartate--ammonia ligase
NUT31_RS15080	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
NUT31_RS15085	COG0542	response to heat
NUT31_RS15095	COG0564	pseudouridine synthase activity
NUT31_RS15100	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NUT31_RS15105	COG0446	pyridine nucleotide-disulphide oxidoreductase
NUT31_RS15115	COG3681	Belongs to the UPF0597 family
NUT31_RS15125	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
NUT31_RS15130	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
NUT31_RS15135	COG1979	alcohol dehydrogenase
NUT31_RS15140	COG2207	Transcriptional regulator
NUT31_RS15145	COG3040	lipid binding
NUT31_RS15160	COG0583	DNA-binding transcription factor activity
NUT31_RS15170	COG0688	phosphatidylethanolamine metabolic process
NUT31_RS15190	COG0540	Belongs to the ATCase OTCase family
NUT31_RS15195	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
NUT31_RS15200	COG1438	arginine binding
NUT31_RS15205	COG1288	antiporter activity
NUT31_RS15210	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NUT31_RS15240	COG0840	transmembrane signaling receptor activity
NUT31_RS15260	COG3250	beta-galactosidase activity
NUT31_RS15265	COG1609	Transcriptional regulator
NUT31_RS15270	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NUT31_RS15280	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
NUT31_RS15285	COG2017	converts alpha-aldose to the beta-anomer
NUT31_RS15290	COG0667	Aldo Keto reductase
NUT31_RS15295	COG1968	undecaprenyl-diphosphatase activity
NUT31_RS15300	COG3806	Anti-sigma factor
NUT31_RS15305	COG1595	DNA-templated transcription, initiation
NUT31_RS15325	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
NUT31_RS15330	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
NUT31_RS15350	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NUT31_RS15355	COG1131	(ABC) transporter
NUT31_RS15360	COG0842	Transport permease protein
NUT31_RS15365	COG0842	Transport permease protein
NUT31_RS15370	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NUT31_RS15380	COG2116	formate transmembrane transporter activity
NUT31_RS15385	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NUT31_RS15385	COG1648	precorrin-2 dehydrogenase activity
NUT31_RS15390	COG2239	Acts as a magnesium transporter
NUT31_RS15400	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NUT31_RS15405	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
NUT31_RS15415	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
NUT31_RS15425	COG0514	ATP-dependent DNA helicase (RecQ)
NUT31_RS15430	COG2050	protein possibly involved in aromatic compounds catabolism
NUT31_RS15445	COG2258	MOSC domain
NUT31_RS15450	COG1177	transmembrane transport
NUT31_RS15455	COG1176	ABC-type spermidine putrescine transport system, permease component I
NUT31_RS15460	COG3842	ATPase activity
NUT31_RS15480	COG0174	glutamine synthetase
NUT31_RS15500	COG3045	CreA protein
NUT31_RS15505	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NUT31_RS15510	COG0443	Heat shock 70 kDa protein
NUT31_RS15525	COG0366	Alpha amylase catalytic
NUT31_RS15530	COG1086	Polysaccharide biosynthesis protein
NUT31_RS15535	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
NUT31_RS15545	COG2192	nodulation
NUT31_RS15555	COG2226	methyltransferase
NUT31_RS15560	COG0859	PFAM glycosyl transferase family 9
NUT31_RS15585	COG1215	transferase activity, transferring glycosyl groups
NUT31_RS15600	COG0318	PFAM AMP-dependent synthetase and ligase
NUT31_RS15605	COG1028	Short-chain dehydrogenase reductase Sdr
NUT31_RS15620	COG1083	cytidylyl-transferase
NUT31_RS15630	COG2089	acid synthase
NUT31_RS15650	COG4310	Domain of unknown function (DUF2172)
NUT31_RS15685	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NUT31_RS15690	COG0745	RESPONSE REGULATOR receiver
NUT31_RS15695	COG2205	protein histidine kinase activity
NUT31_RS15705	COG0281	malic enzyme
NUT31_RS15710	COG0702	epimerase
NUT31_RS15715	COG0254	rRNA binding
NUT31_RS15720	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NUT31_RS15740	COG0129	dihydroxy-acid dehydratase activity
NUT31_RS15750	COG3978	acetolactate synthase activity
NUT31_RS15760	COG0606	chelatase, subunit chli
NUT31_RS15765	COG0204	Acyl-transferase
NUT31_RS15770	COG0204	Acyl-transferase
NUT31_RS15775	COG1683	Conserved Protein
NUT31_RS15785	COG1335	isochorismatase
NUT31_RS15795	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NUT31_RS15800	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
NUT31_RS15810	COG3084	Protein conserved in bacteria
NUT31_RS15815	COG4251	negative regulation of phosphorylation
NUT31_RS15815	COG2203	Gaf domain
NUT31_RS15815	COG3706	GGDEF domain
NUT31_RS15815	COG5001	Diguanylate cyclase
NUT31_RS15830	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NUT31_RS15835	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
NUT31_RS15840	COG1561	YicC-like family, N-terminal region
NUT31_RS15845	COG0076	glutamate decarboxylase activity
NUT31_RS15855	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NUT31_RS15875	COG2375	cellular response to nickel ion
NUT31_RS15875	COG1132	(ABC) transporter
NUT31_RS15880	COG1132	(ABC) transporter
NUT31_RS15885	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NUT31_RS15890	COG4605	iron ion homeostasis
NUT31_RS15895	COG4604	ABC transporter, ATP-binding protein
NUT31_RS15900	COG4607	ABC-type enterochelin transport system periplasmic component
NUT31_RS15905	COG4774	siderophore transport
NUT31_RS15925	COG3306	glycosyltransferase involved in LPS biosynthesis
NUT31_RS15930	COG3307	-O-antigen
NUT31_RS15940	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NUT31_RS15950	COG0156	8-amino-7-oxononanoate synthase activity
NUT31_RS15955	COG1063	alcohol dehydrogenase
NUT31_RS15960	COG3245	cytochrome
NUT31_RS15970	COG0210	DNA helicase
NUT31_RS15975	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NUT31_RS15980	COG2166	iron-sulfur cluster assembly
NUT31_RS15985	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
NUT31_RS16020	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
NUT31_RS16025	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
NUT31_RS16030	COG1739	Uncharacterized protein family UPF0029
NUT31_RS16035	COG0006	proline dipeptidase activity
NUT31_RS16040	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NUT31_RS16045	COG1024	Enoyl-CoA hydratase
NUT31_RS16045	COG1250	3-hydroxyacyl-CoA dehydrogenase
NUT31_RS16050	COG0183	Belongs to the thiolase family
NUT31_RS16075	COG0425	Belongs to the sulfur carrier protein TusA family
NUT31_RS16080	COG0251	oxidation-reduction process
NUT31_RS16085	COG2885	chlorophyll binding
NUT31_RS16095	COG2818	Glycosylase
NUT31_RS16100	COG0752	glycyl-tRNA synthetase alpha subunit
NUT31_RS16105	COG0751	glycine-tRNA ligase activity
NUT31_RS16135	COG0814	amino acid
NUT31_RS16140	COG0348	domain, Protein
NUT31_RS16145	COG2188	Transcriptional regulator
NUT31_RS16160	COG1609	Transcriptional regulator
NUT31_RS16200	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NUT31_RS16225	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
NUT31_RS16240	COG3118	belongs to the thioredoxin family
NUT31_RS16245	COG0513	Belongs to the DEAD box helicase family
NUT31_RS16250	COG0248	Ppx GppA phosphatase
NUT31_RS16260	COG0742	ribosomal rna small subunit methyltransferase
NUT31_RS16265	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NUT31_RS16285	COG0084	hydrolase, TatD family'
NUT31_RS16290	COG0805	protein transport
NUT31_RS16295	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NUT31_RS16305	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
NUT31_RS16310	COG3165	ubiquinone biosynthetic process from chorismate
NUT31_RS16320	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NUT31_RS16325	COG0402	S-adenosylhomocysteine deaminase activity
NUT31_RS16365	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
NUT31_RS16370	COG0848	biopolymer transport protein
NUT31_RS16375	COG0811	peptide transport
NUT31_RS16380	COG0811	peptide transport
NUT31_RS16390	COG2771	luxR family
NUT31_RS16395	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
NUT31_RS16400	COG1349	DNA-binding transcription factor activity
NUT31_RS16405	COG0745	RESPONSE REGULATOR receiver
NUT31_RS16410	COG2205	protein histidine kinase activity
NUT31_RS16420	COG4452	Inner membrane protein CreD
NUT31_RS16425	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NUT31_RS16430	COG0355	proton-transporting ATP synthase activity, rotational mechanism
NUT31_RS16435	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NUT31_RS16440	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
NUT31_RS16445	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NUT31_RS16450	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NUT31_RS16455	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NUT31_RS16465	COG0356	it plays a direct role in the translocation of protons across the membrane
NUT31_RS16475	COG1475	DNA binding
NUT31_RS16480	COG1192	Involved in chromosome partitioning
NUT31_RS16485	COG0357	Ribosomal RNA small subunit methyltransferase G
NUT31_RS16490	COG0445	tRNA wobble uridine modification
NUT31_RS16495	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
NUT31_RS16500	COG4774	siderophore transport
NUT31_RS16505	COG4615	Cyclic peptide transporter
NUT31_RS16510	COG1120	ATPase activity
NUT31_RS16525	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
NUT31_RS16530	COG0706	membrane insertase activity
NUT31_RS16535	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
NUT31_RS16540	COG0594	ribonuclease P activity
NUT31_RS16545	COG0230	Belongs to the bacterial ribosomal protein bL34 family
NUT31_RS16550	COG1126	abc transporter atp-binding protein
NUT31_RS16565	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NUT31_RS16570	COG0592	DNA-directed DNA polymerase activity
NUT31_RS16575	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NUT31_RS16590	COG2378	regulation of single-species biofilm formation
NUT31_RS16600	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
NUT31_RS16605	COG0071	Belongs to the small heat shock protein (HSP20) family
NUT31_RS16610	COG0071	Belongs to the small heat shock protein (HSP20) family
NUT31_RS16615	COG3977	Valine--pyruvate aminotransferase
NUT31_RS16630	COG2814	Major facilitator Superfamily
NUT31_RS16635	COG0745	RESPONSE REGULATOR receiver
NUT31_RS16640	COG2205	protein histidine kinase activity
NUT31_RS16660	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NUT31_RS16665	COG4191	Histidine kinase
NUT31_RS16665	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NUT31_RS16670	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NUT31_RS16675	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NUT31_RS16680	COG1309	transcriptional regulator
NUT31_RS16710	COG0469	pyruvate kinase activity
NUT31_RS16715	COG2271	Major facilitator Superfamily
NUT31_RS16740	COG0561	phosphatase activity
NUT31_RS16745	COG2267	carboxylic ester hydrolase activity
NUT31_RS16755	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NUT31_RS16760	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NUT31_RS16765	COG1758	RNA polymerase activity
NUT31_RS16775	COG0859	PFAM glycosyl transferase family 9
NUT31_RS16780	COG3642	lipopolysaccharide core region biosynthetic process
NUT31_RS16820	COG0589	response to stress
NUT31_RS16825	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
NUT31_RS16835	COG1528	Iron-storage protein
NUT31_RS16840	COG2081	HI0933 family
NUT31_RS16845	COG2223	nitrite transmembrane transporter activity
NUT31_RS16865	COG3188	usher protein
NUT31_RS16885	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NUT31_RS16885	COG2205	protein histidine kinase activity
NUT31_RS16895	COG3275	phosphorelay sensor kinase activity
NUT31_RS16900	COG3279	Response regulator of the LytR AlgR family
NUT31_RS16905	COG2223	nitrite transmembrane transporter activity
NUT31_RS16910	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NUT31_RS16915	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NUT31_RS16930	COG0583	DNA-binding transcription factor activity
NUT31_RS16935	COG4206	TonB-dependent receptor
NUT31_RS16940	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
NUT31_RS16970	COG0045	succinate-CoA ligase (ADP-forming) activity
NUT31_RS16970	COG1042	CoA-binding domain protein
NUT31_RS16970	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NUT31_RS16985	COG0583	DNA-binding transcription factor activity
NUT31_RS16990	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NUT31_RS16995	COG0166	Belongs to the GPI family
NUT31_RS17005	COG0668	transmembrane transport
NUT31_RS17010	COG1309	transcriptional regulator
NUT31_RS17015	COG0756	dUTP diphosphatase activity
NUT31_RS17020	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NUT31_RS17025	COG2003	Belongs to the UPF0758 family
NUT31_RS17030	COG0227	Belongs to the bacterial ribosomal protein bL28 family
NUT31_RS17035	COG0267	Belongs to the bacterial ribosomal protein bL33 family
NUT31_RS17045	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
NUT31_RS17050	COG2990	Protein conserved in bacteria
NUT31_RS17055	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
NUT31_RS17060	COG0859	PFAM glycosyl transferase family 9
NUT31_RS17065	COG0463	Glycosyl transferase, family 2
NUT31_RS17070	COG0859	PFAM glycosyl transferase family 9
NUT31_RS17075	COG1519	Transferase
NUT31_RS17095	COG1609	Transcriptional regulator
NUT31_RS17100	COG0604	alcohol dehydrogenase
NUT31_RS17120	COG1580	Controls the rotational direction of flagella during chemotaxis
NUT31_RS17125	COG3161	chorismate lyase activity
NUT31_RS17130	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
NUT31_RS17135	COG2937	Belongs to the GPAT DAPAT family
NUT31_RS17140	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NUT31_RS17155	COG0534	Mate efflux family protein
NUT31_RS17160	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
NUT31_RS17165	COG2205	protein histidine kinase activity
NUT31_RS17170	COG0745	RESPONSE REGULATOR receiver
NUT31_RS17180	COG1045	serine acetyltransferase
NUT31_RS17190	COG3074	FtsZ-dependent cytokinesis
NUT31_RS17195	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
NUT31_RS17200	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NUT31_RS17200	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NUT31_RS17205	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
NUT31_RS17240	COG1609	Transcriptional regulator
NUT31_RS17245	COG3250	beta-galactosidase activity
NUT31_RS17250	COG2731	YhcH YjgK YiaL family protein
NUT31_RS17255	COG0531	amino acid
NUT31_RS17260	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NUT31_RS17265	COG0531	amino acid
NUT31_RS17270	COG0385	Bile acid
NUT31_RS17275	COG1262	PFAM Formylglycine-generating sulfatase enzyme
NUT31_RS17295	COG0583	DNA-binding transcription factor activity
NUT31_RS17300	COG1079	Belongs to the binding-protein-dependent transport system permease family
NUT31_RS17305	COG4603	Belongs to the binding-protein-dependent transport system permease family
NUT31_RS17310	COG3845	ABC transporter
NUT31_RS17315	COG1744	ABC transporter substrate-binding protein PnrA-like
NUT31_RS17320	COG0210	DNA helicase
NUT31_RS17340	COG1943	Transposase
NUT31_RS17345	COG1943	Transposase
NUT31_RS17350	COG0583	DNA-binding transcription factor activity
NUT31_RS17375	COG3161	chorismate lyase activity
NUT31_RS17410	COG2391	methyltransferase activity
NUT31_RS17420	COG1280	lysine exporter protein (LysE YggA)
NUT31_RS17430	COG2962	Rard protein
NUT31_RS17440	COG1012	belongs to the aldehyde dehydrogenase family
NUT31_RS17445	COG1396	sequence-specific DNA binding
NUT31_RS17450	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NUT31_RS17460	COG0518	GMP synthase (glutamine-hydrolyzing) activity
NUT31_RS17460	COG0519	Catalyzes the synthesis of GMP from XMP
NUT31_RS17465	COG0686	Belongs to the AlaDH PNT family
NUT31_RS17470	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NUT31_RS17490	COG1322	Protein conserved in bacteria
NUT31_RS17495	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
NUT31_RS17500	COG0569	domain protein
NUT31_RS17505	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NUT31_RS17505	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NUT31_RS17510	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NUT31_RS17515	COG0242	peptide deformylase activity
NUT31_RS17525	COG0758	DNA mediated transformation
NUT31_RS17530	COG2922	Belongs to the Smg family
NUT31_RS17535	COG0551	DNA topoisomerase type I activity
NUT31_RS17545	COG0009	L-threonylcarbamoyladenylate synthase
NUT31_RS17550	COG0408	coproporphyrinogen oxidase activity
NUT31_RS17555	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
NUT31_RS17565	COG0218	Necessary for normal cell division and for the maintenance of normal septation
NUT31_RS17575	COG3078	GTPase activator activity
NUT31_RS17585	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NUT31_RS17590	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
NUT31_RS17595	COG2204	response regulator
NUT31_RS17600	COG3852	Histidine kinase
NUT31_RS17610	COG0174	glutamine synthetase
NUT31_RS17615	COG1217	gtp-binding protein TYPA
NUT31_RS17620	COG1295	ribonuclease BN
NUT31_RS17625	COG1490	D-aminoacyl-tRNA deacylase activity
NUT31_RS17635	COG0456	acetyltransferase
NUT31_RS17645	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NUT31_RS17650	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NUT31_RS17655	COG2610	gluconate transmembrane transporter activity
NUT31_RS17660	COG3265	gluconokinase activity
NUT31_RS17665	COG0129	dihydroxy-acid dehydratase activity
NUT31_RS17670	COG0800	Aldolase
NUT31_RS17675	COG1609	Transcriptional regulator
NUT31_RS17685	COG4942	peptidase
NUT31_RS17690	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NUT31_RS17695	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NUT31_RS17700	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
NUT31_RS17705	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
NUT31_RS17710	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
NUT31_RS17710	COG0316	Belongs to the HesB IscA family
NUT31_RS17715	COG1040	competence protein
NUT31_RS17720	COG0596	Alpha beta hydrolase
NUT31_RS17740	COG2183	response to ionizing radiation
NUT31_RS17745	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NUT31_RS17765	COG0051	transcription antitermination factor activity, RNA binding
NUT31_RS17770	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NUT31_RS17775	COG0088	Forms part of the polypeptide exit tunnel
NUT31_RS17780	COG0089	rRNA binding
NUT31_RS17785	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NUT31_RS17790	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NUT31_RS17795	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
NUT31_RS17800	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
NUT31_RS17805	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
NUT31_RS17810	COG0255	Belongs to the universal ribosomal protein uL29 family
NUT31_RS17815	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NUT31_RS17820	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
NUT31_RS17825	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
NUT31_RS17830	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
NUT31_RS17835	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NUT31_RS17840	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NUT31_RS17845	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
NUT31_RS17850	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
NUT31_RS17855	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
NUT31_RS17860	COG1841	ribosomal large subunit assembly
NUT31_RS17865	COG0200	Binds to the 23S rRNA
NUT31_RS17870	COG0201	protein transport
NUT31_RS17875	COG0257	Belongs to the bacterial ribosomal protein bL36 family
NUT31_RS17880	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
NUT31_RS17885	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
NUT31_RS17890	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
NUT31_RS17895	COG0202	RNA polymerase activity
NUT31_RS17900	COG0203	ribosomal protein L17
NUT31_RS17955	COG2249	NAD(P)H dehydrogenase (quinone) activity
NUT31_RS17960	COG0583	DNA-binding transcription factor activity
NUT31_RS17965	COG4221	oxidoreductase activity
NUT31_RS17980	COG1770	oligopeptidase
NUT31_RS18005	COG3714	YhhN family
NUT31_RS18030	COG1301	dicarboxylic acid transport
NUT31_RS18040	COG2095	MarC family integral membrane protein
NUT31_RS18050	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NUT31_RS18060	COG0741	lytic transglycosylase activity
NUT31_RS18070	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NUT31_RS18095	COG0742	ribosomal rna small subunit methyltransferase
NUT31_RS18100	COG0552	protein localization to endoplasmic reticulum
NUT31_RS18105	COG2884	Cell division ATP-binding protein ftsE
NUT31_RS18110	COG2177	Part of the ABC transporter FtsEX involved in
NUT31_RS18120	COG0288	reversible hydration of carbon dioxide
NUT31_RS18125	COG2188	Transcriptional regulator
NUT31_RS18130	COG1228	amidohydrolase
NUT31_RS18135	COG0010	Belongs to the arginase family
NUT31_RS18140	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
NUT31_RS18145	COG2986	histidine ammonia-lyase
NUT31_RS18150	COG0387	Pfam Sodium calcium exchanger
NUT31_RS18155	COG2200	EAL domain
NUT31_RS18160	COG2199	diguanylate cyclase activity
NUT31_RS18160	COG2200	EAL domain
NUT31_RS18195	COG2842	Transposition protein
NUT31_RS18205	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NUT31_RS18210	COG1459	type II secretion system
NUT31_RS18220	COG2165	general secretion pathway protein
NUT31_RS18255	COG1077	Cell shape determining protein MreB Mrl
NUT31_RS18260	COG1792	Involved in formation and maintenance of cell shape
NUT31_RS18265	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
NUT31_RS18270	COG0424	maF-like protein
NUT31_RS18275	COG1530	ribonuclease E activity
NUT31_RS18280	COG3164	Protein of unknown function
NUT31_RS18290	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NUT31_RS18295	COG0312	modulator of DNA gyrase
NUT31_RS18315	COG1263	PTS System
NUT31_RS18315	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NUT31_RS18320	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
NUT31_RS18340	COG0477	Major facilitator Superfamily
NUT31_RS18350	COG3437	response regulator, receiver
NUT31_RS18355	COG5002	protein histidine kinase activity
NUT31_RS18355	COG0784	Response regulator, receiver
NUT31_RS18355	COG2205	protein histidine kinase activity
NUT31_RS18360	COG2172	sigma factor antagonist activity
NUT31_RS18365	COG1366	Belongs to the anti-sigma-factor antagonist family
NUT31_RS18385	COG3700	Belongs to the class B bacterial acid phosphatase family
NUT31_RS18390	COG2321	neutral zinc metallopeptidase
NUT31_RS18400	COG1639	'signal transduction protein
NUT31_RS18425	COG0189	ligase activity
NUT31_RS18435	COG0642	Histidine kinase
NUT31_RS18440	COG0745	RESPONSE REGULATOR receiver
NUT31_RS18460	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
NUT31_RS18465	COG0352	thiamine-phosphate diphosphorylase activity
NUT31_RS18470	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NUT31_RS18480	COG2022	thiamine diphosphate biosynthetic process
NUT31_RS18485	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
NUT31_RS18500	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
NUT31_RS18520	COG3706	GGDEF domain
NUT31_RS18525	COG0814	amino acid
NUT31_RS18530	COG3932	Exopolysaccharide synthesis, ExoD
NUT31_RS18550	COG1733	regulation of RNA biosynthetic process
NUT31_RS18590	COG1494	fructose-1,6-bisphosphatase
NUT31_RS18605	COG2959	enzyme of heme biosynthesis
NUT31_RS18615	COG0181	hydroxymethylbilane synthase activity
NUT31_RS18620	COG3072	Adenylate cyclase
NUT31_RS18625	COG0400	carboxylic ester hydrolase activity
NUT31_RS18630	COG1965	Belongs to the frataxin family
NUT31_RS18640	COG0019	diaminopimelate decarboxylase activity
NUT31_RS18645	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
NUT31_RS18660	COG1011	Hydrolase
NUT31_RS18680	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
NUT31_RS18685	COG0561	phosphatase activity
NUT31_RS18695	COG1058	Belongs to the CinA family
NUT31_RS18695	COG1546	Belongs to the CinA family
NUT31_RS18700	COG1418	mRNA catabolic process
NUT31_RS18705	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
NUT31_RS18715	COG1522	sequence-specific DNA binding
NUT31_RS18720	COG1368	sulfuric ester hydrolase activity
NUT31_RS18740	COG1285	pathogenesis
NUT31_RS18760	COG4221	oxidoreductase activity
NUT31_RS18780	COG1979	alcohol dehydrogenase
NUT31_RS18790	COG2873	o-acetylhomoserine
NUT31_RS18800	COG4533	DNA binding
NUT31_RS18815	COG5380	lipid catabolic process
NUT31_RS18820	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
NUT31_RS18830	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NUT31_RS18835	COG2949	membrane
NUT31_RS18840	COG3291	Pkd domain containing protein
NUT31_RS18850	COG3539	Fimbrial protein
NUT31_RS18860	COG3188	usher protein
NUT31_RS18865	COG3121	Chaperone
NUT31_RS18885	COG0318	PFAM AMP-dependent synthetase and ligase
NUT31_RS18890	COG1441	menaquinone biosynthetic process
NUT31_RS18895	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
NUT31_RS18900	COG0596	Alpha beta hydrolase
NUT31_RS18905	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
NUT31_RS18910	COG1169	isochorismate synthase
NUT31_RS18915	COG1575	Belongs to the MenA family. Type 1 subfamily
NUT31_RS18940	COG0513	Belongs to the DEAD box helicase family
NUT31_RS18945	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NUT31_RS18950	COG1988	membrane-bound metal-dependent
NUT31_RS18965	COG1671	Belongs to the UPF0178 family
NUT31_RS18990	COG3263	regulation of cellular component size
NUT31_RS18995	COG3722	fumarate hydratase activity
NUT31_RS19000	COG0246	Mannitol dehydrogenase
NUT31_RS19005	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
NUT31_RS19005	COG2213	PTS system mannitol-specific
NUT31_RS19015	COG1309	transcriptional regulator
NUT31_RS19020	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
NUT31_RS19030	COG3916	Acyl-homoserine-lactone synthase
NUT31_RS19035	COG2771	luxR family
NUT31_RS19050	COG3133	Outer membrane lipoprotein
NUT31_RS19055	COG0456	acetyltransferase
NUT31_RS19075	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
NUT31_RS19080	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
NUT31_RS19090	COG3031	protein transport across the cell outer membrane
NUT31_RS19100	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NUT31_RS19105	COG1459	type II secretion system
NUT31_RS19110	COG2165	general secretion pathway protein
NUT31_RS19125	COG2165	general secretion pathway protein
NUT31_RS19130	COG4795	General secretion pathway protein
NUT31_RS19135	COG3156	type II secretion system protein K
NUT31_RS19145	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
NUT31_RS19160	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NUT31_RS19165	COG1011	Hydrolase
NUT31_RS19170	COG0494	nUDIX hydrolase
NUT31_RS19175	COG1218	3'(2'),5'-bisphosphate nucleotidase
NUT31_RS19180	COG0814	amino acid
NUT31_RS19185	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NUT31_RS19190	COG3708	Transcriptional regulator
NUT31_RS19190	COG2207	Transcriptional regulator
NUT31_RS19200	COG0626	cystathionine gamma-synthase activity
NUT31_RS19205	COG0460	homoserine dehydrogenase
NUT31_RS19205	COG0527	aspartate kinase activity
NUT31_RS19210	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
NUT31_RS19220	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
NUT31_RS19225	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
NUT31_RS19235	COG0137	argininosuccinate synthase activity
NUT31_RS19240	COG0165	Argininosuccinate lyase
NUT31_RS19245	COG0583	DNA-binding transcription factor activity
NUT31_RS19255	COG1942	4-Oxalocrotonate Tautomerase
NUT31_RS19285	COG0110	maltose O-acetyltransferase activity
NUT31_RS19290	COG3174	membrane
NUT31_RS19295	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
NUT31_RS19305	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
NUT31_RS19310	COG4208	sulfate ABC transporter
NUT31_RS19315	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
NUT31_RS19320	COG0583	DNA-binding transcription factor activity
NUT31_RS19325	COG3397	chitin binding
NUT31_RS19360	COG0793	Belongs to the peptidase S41A family
NUT31_RS19360	COG4946	Tricorn protease homolog
NUT31_RS19380	COG1328	CTP reductase activity
NUT31_RS19385	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NUT31_RS19395	COG0583	DNA-binding transcription factor activity
NUT31_RS19400	COG1448	Aminotransferase
NUT31_RS19440	COG0513	Belongs to the DEAD box helicase family
NUT31_RS19460	COG0840	transmembrane signaling receptor activity
NUT31_RS19475	COG3112	Uncharacterised protein family (UPF0231)
NUT31_RS19480	COG3835	regulator
NUT31_RS19485	COG2610	gluconate transmembrane transporter activity
NUT31_RS19490	COG1929	Belongs to the glycerate kinase type-1 family
NUT31_RS19505	COG0583	DNA-binding transcription factor activity
NUT31_RS19510	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NUT31_RS19525	COG0347	Belongs to the P(II) protein family
NUT31_RS19530	COG1840	ABC-type Fe3 transport system, periplasmic component
NUT31_RS19540	COG3842	ATPase activity
NUT31_RS19545	COG2837	iron assimilation
NUT31_RS19550	COG1438	arginine binding
NUT31_RS19555	COG1126	abc transporter atp-binding protein
NUT31_RS19560	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NUT31_RS19565	COG4215	(ABC) transporter
NUT31_RS19570	COG4160	amino acid transport
NUT31_RS19575	COG0039	L-malate dehydrogenase activity
NUT31_RS19580	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
NUT31_RS19585	COG1017	nitric oxide dioxygenase activity
NUT31_RS19585	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NUT31_RS19595	COG4536	flavin adenine dinucleotide binding
NUT31_RS19600	COG4137	Cytochrome C assembly protein
NUT31_RS19605	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NUT31_RS19610	COG0228	four-way junction DNA binding
NUT31_RS19615	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NUT31_RS19620	COG0336	Belongs to the RNA methyltransferase TrmD family
NUT31_RS19625	COG0335	large ribosomal subunit rRNA binding
NUT31_RS19635	COG3066	DNA modification
NUT31_RS19640	COG1051	belongs to the nudix hydrolase family
NUT31_RS19650	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NUT31_RS19655	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NUT31_RS19660	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
NUT31_RS19670	COG0583	DNA-binding transcription factor activity
NUT31_RS19675	COG0640	Transcriptional regulator
NUT31_RS19680	COG0268	Binds directly to 16S ribosomal RNA
NUT31_RS19685	COG0728	peptidoglycan biosynthetic process
NUT31_RS19695	COG0196	riboflavin kinase activity
NUT31_RS19700	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NUT31_RS19705	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
NUT31_RS19710	COG1047	Peptidyl-prolyl cis-trans
NUT31_RS19715	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
NUT31_RS19755	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NUT31_RS19755	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
NUT31_RS19770	COG1854	S-ribosylhomocysteine lyase activity
NUT31_RS19775	COG3706	GGDEF domain
NUT31_RS19780	COG0557	exoribonuclease II activity
NUT31_RS19795	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NUT31_RS19805	COG2153	protein acetylation
NUT31_RS19825	COG1914	H( )-stimulated, divalent metal cation uptake system
NUT31_RS19830	COG0360	Binds together with S18 to 16S ribosomal RNA
NUT31_RS19835	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NUT31_RS19840	COG0359	binds to the 23S rRNA
NUT31_RS19845	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NUT31_RS19870	COG1238	metal cluster binding
NUT31_RS19875	COG0612	Peptidase, M16
NUT31_RS19880	COG2918	glutathione biosynthetic process
NUT31_RS19890	COG1022	Amp-dependent synthetase and ligase
NUT31_RS19900	COG0456	acetyltransferase
NUT31_RS19910	COG0714	Associated with various cellular activities
NUT31_RS19920	COG3300	MHYT domain
NUT31_RS19920	COG5001	Diguanylate cyclase
NUT31_RS19955	COG1902	pentaerythritol trinitrate reductase activity
NUT31_RS19965	COG2852	Protein conserved in bacteria
NUT31_RS19975	COG2957	Belongs to the agmatine deiminase family
NUT31_RS19980	COG0154	amidase activity
NUT31_RS20005	COG0513	Belongs to the DEAD box helicase family
NUT31_RS20010	COG3706	GGDEF domain
NUT31_RS20035	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
NUT31_RS20060	COG2070	2-Nitropropane dioxygenase
NUT31_RS20090	COG2816	NAD+ diphosphatase activity
NUT31_RS20095	COG2205	protein histidine kinase activity
NUT31_RS20100	COG0745	RESPONSE REGULATOR receiver
NUT31_RS20105	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NUT31_RS20110	COG0577	efflux transmembrane transporter activity
NUT31_RS20110	COG1136	(ABC) transporter
NUT31_RS20115	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NUT31_RS20120	COG1126	abc transporter atp-binding protein
NUT31_RS20125	COG0765	amino acid transport
NUT31_RS20130	COG0765	amino acid transport
NUT31_RS20135	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
NUT31_RS20140	COG1505	serine-type exopeptidase activity
NUT31_RS20155	COG1028	Short-chain dehydrogenase reductase Sdr
NUT31_RS20160	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
NUT31_RS20175	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NUT31_RS20180	COG4991	sh3 domain protein
NUT31_RS20190	COG2816	NAD+ diphosphatase activity
NUT31_RS20195	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
NUT31_RS20200	COG1940	carbohydrate kinase activity
NUT31_RS20205	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NUT31_RS20210	COG0126	phosphoglycerate kinase activity
NUT31_RS20220	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NUT31_RS20260	COG0354	folic acid binding
NUT31_RS20265	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
NUT31_RS20275	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
NUT31_RS20280	COG1595	DNA-templated transcription, initiation
NUT31_RS20285	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
NUT31_RS20300	COG0481	GTPase activity
NUT31_RS20305	COG0681	Belongs to the peptidase S26 family
NUT31_RS20310	COG0571	ribonuclease III activity
NUT31_RS20320	COG1381	Involved in DNA repair and RecF pathway recombination
NUT31_RS20325	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
NUT31_RS20340	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
NUT31_RS20345	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
NUT31_RS20350	COG3716	PTS system mannose fructose sorbose family IID component
NUT31_RS20360	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NUT31_RS20365	COG2222	sugar isomerase
NUT31_RS20375	COG1349	DNA-binding transcription factor activity
NUT31_RS20380	COG3023	N-Acetylmuramoyl-L-alanine amidase
NUT31_RS20385	COG4807	Protein conserved in bacteria
NUT31_RS20395	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NUT31_RS20400	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NUT31_RS20405	COG3956	TIGRFAM MazG family protein
NUT31_RS20410	COG0504	CTP synthase activity
NUT31_RS20415	COG0148	phosphopyruvate hydratase activity
NUT31_RS20420	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
NUT31_RS20425	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
NUT31_RS20435	COG0585	pseudouridine synthase activity
NUT31_RS20440	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
NUT31_RS20445	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
NUT31_RS20450	COG1238	metal cluster binding
NUT31_RS20465	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NUT31_RS20470	COG0828	Belongs to the bacterial ribosomal protein bS21 family
NUT31_RS20475	COG1610	YqeY-like protein
NUT31_RS20480	COG0358	DNA primase activity
NUT31_RS20485	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NUT31_RS20510	COG0151	Belongs to the GarS family
NUT31_RS20515	COG0138	bifunctional purine biosynthesis protein purh
NUT31_RS20525	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NUT31_RS20530	COG3036	rescue of stalled ribosome
NUT31_RS20535	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NUT31_RS20540	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NUT31_RS20550	COG0673	inositol 2-dehydrogenase activity
NUT31_RS20560	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NUT31_RS20565	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NUT31_RS20580	COG0477	Major facilitator Superfamily
NUT31_RS20590	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
NUT31_RS20595	COG1027	Aspartate ammonia-lyase
NUT31_RS20600	COG3030	protein affecting phage T7 exclusion by the F plasmid
NUT31_RS20605	COG0534	Mate efflux family protein
NUT31_RS20610	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NUT31_RS20615	COG0459	protein refolding
NUT31_RS20625	COG3300	MHYT domain
NUT31_RS20625	COG5001	Diguanylate cyclase
NUT31_RS20635	COG0564	pseudouridine synthase activity
NUT31_RS20640	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
NUT31_RS20680	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
NUT31_RS20690	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
NUT31_RS20700	COG4143	(ABC) transporter
NUT31_RS20715	COG0066	3-isopropylmalate dehydratase activity
NUT31_RS20720	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NUT31_RS20725	COG0473	3-isopropylmalate dehydrogenase activity
NUT31_RS20730	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NUT31_RS20740	COG0671	phosphoesterase, PA-phosphatase related
NUT31_RS20745	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NUT31_RS20755	COG0028	Belongs to the TPP enzyme family
NUT31_RS20765	COG0280	phosphate acetyltransferase
NUT31_RS20765	COG0857	belongs to the CobB CobQ family
NUT31_RS20770	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NUT31_RS20780	COG3013	Belongs to the UPF0304 family
NUT31_RS20785	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
NUT31_RS20790	COG2716	regulation of RNA biosynthetic process
NUT31_RS20800	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
NUT31_RS20805	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
NUT31_RS20820	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
NUT31_RS20840	COG5002	protein histidine kinase activity
NUT31_RS20840	COG0784	Response regulator, receiver
NUT31_RS20840	COG2198	Histidine kinase
NUT31_RS20865	COG0840	transmembrane signaling receptor activity
NUT31_RS20880	COG1464	Belongs to the NlpA lipoprotein family
NUT31_RS20885	COG2011	ABC-type metal ion transport system permease component
NUT31_RS20890	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NUT31_RS20905	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
NUT31_RS20910	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
NUT31_RS20910	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NUT31_RS20915	COG0802	atpase or kinase
NUT31_RS20925	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NUT31_RS20930	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NUT31_RS20935	COG1923	regulation of RNA biosynthetic process
NUT31_RS20940	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NUT31_RS20945	COG0330	HflC and HflK could
NUT31_RS20950	COG0330	HflC and HflK could
NUT31_RS20955	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
NUT31_RS20960	COG0142	geranyltranstransferase activity
NUT31_RS20965	COG0261	This protein binds to 23S rRNA in the presence of protein L20
NUT31_RS20970	COG0211	Belongs to the bacterial ribosomal protein bL27 family
NUT31_RS20975	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NUT31_RS20980	COG3314	Sporulation integral membrane protein YlbJ
NUT31_RS20985	COG0318	PFAM AMP-dependent synthetase and ligase
NUT31_RS21000	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
NUT31_RS21005	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NUT31_RS21015	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
NUT31_RS21020	COG2967	ApaG domain
NUT31_RS21025	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
NUT31_RS21030	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
NUT31_RS21040	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
NUT31_RS21045	COG3178	'Phosphotransferase
NUT31_RS21050	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
NUT31_RS21055	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
NUT31_RS21060	COG2252	PERMEase
NUT31_RS21070	COG0488	(ABC) transporter
NUT31_RS21085	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NUT31_RS21090	COG0741	lytic transglycosylase activity
NUT31_RS21110	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
NUT31_RS21115	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NUT31_RS21120	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NUT31_RS21140	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
NUT31_RS21145	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NUT31_RS21155	COG3721	Heme iron utilization protein
NUT31_RS21160	COG0748	coenzyme F420 binding
NUT31_RS21180	COG4771	TonB-dependent receptor
NUT31_RS21185	COG2814	Major facilitator Superfamily
NUT31_RS21190	COG3655	Transcriptional regulator
NUT31_RS21200	COG2202	Pas domain
NUT31_RS21200	COG2205	protein histidine kinase activity
NUT31_RS21215	COG3397	chitin binding
NUT31_RS21220	COG2226	methyltransferase
NUT31_RS21230	COG1765	OsmC-like protein
NUT31_RS21245	COG3954	Phosphoribulokinase
NUT31_RS21250	COG2076	Multidrug Resistance protein
NUT31_RS21255	COG2076	Multidrug Resistance protein
NUT31_RS21260	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NUT31_RS21265	COG0726	polysaccharide deacetylase
NUT31_RS21270	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NUT31_RS21270	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NUT31_RS21275	COG0463	Glycosyl transferase, family 2
NUT31_RS21280	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
NUT31_RS21290	COG3089	Belongs to the UPF0270 family
NUT31_RS21295	COG5001	Diguanylate cyclase
NUT31_RS21295	COG4251	negative regulation of phosphorylation
NUT31_RS21295	COG3706	GGDEF domain
NUT31_RS21295	COG2203	Gaf domain
NUT31_RS21300	COG0429	hydrolase of the alpha beta-hydrolase fold
NUT31_RS21305	COG0835	chemotaxis
NUT31_RS21305	COG0784	Response regulator, receiver
NUT31_RS21315	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
NUT31_RS21320	COG1047	Peptidyl-prolyl cis-trans
NUT31_RS21335	COG0545	Peptidyl-prolyl cis-trans isomerase
NUT31_RS21340	COG2204	response regulator
NUT31_RS21360	COG0737	Belongs to the 5'-nucleotidase family
NUT31_RS21365	COG2200	EAL domain
NUT31_RS21380	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NUT31_RS21390	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
NUT31_RS21395	COG0826	peptidase U32
NUT31_RS21400	COG2200	EAL domain
NUT31_RS21400	COG2203	Gaf domain
NUT31_RS21400	COG2199	diguanylate cyclase activity
NUT31_RS21425	COG2197	response regulator
NUT31_RS21430	COG2205	protein histidine kinase activity
NUT31_RS21430	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NUT31_RS21440	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NUT31_RS21440	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
NUT31_RS21445	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NUT31_RS21455	COG1151	hydroxylamine reductase activity
NUT31_RS21460	COG0783	Belongs to the Dps family
NUT31_RS21485	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
NUT31_RS21500	COG4221	oxidoreductase activity
NUT31_RS21510	COG0415	Belongs to the DNA photolyase family
NUT31_RS21515	COG0789	Transcriptional regulator
NUT31_RS21520	COG3272	Protein of unknown function (DUF1722)
NUT31_RS21550	COG1605	Chorismate mutase
NUT31_RS21550	COG0077	Prephenate dehydratase
NUT31_RS21600	COG3311	Transcriptional regulator
NUT31_RS21650	COG2003	Belongs to the UPF0758 family
NUT31_RS21710	COG0745	RESPONSE REGULATOR receiver
NUT31_RS21750	COG3539	Fimbrial protein
NUT31_RS21755	COG3121	Chaperone
NUT31_RS21760	COG3188	usher protein
NUT31_RS21765	COG3539	Fimbrial protein
NUT31_RS21785	COG1349	DNA-binding transcription factor activity
NUT31_RS21790	COG2084	Dehydrogenase
NUT31_RS21800	COG0235	Class ii aldolase
NUT31_RS21805	COG3622	Belongs to the hyi family
NUT31_RS21810	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NUT31_RS21815	COG2610	gluconate transmembrane transporter activity
NUT31_RS21825	COG0840	transmembrane signaling receptor activity
NUT31_RS21835	COG0300	oxidoreductase activity
NUT31_RS21860	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
NUT31_RS21875	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NUT31_RS21880	COG0826	peptidase U32
NUT31_RS21885	COG1280	lysine exporter protein (LysE YggA)
NUT31_RS21895	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NUT31_RS21900	COG0840	transmembrane signaling receptor activity
NUT31_RS21915	COG0643	Histidine kinase
NUT31_RS21915	COG2198	Histidine kinase
NUT31_RS21925	COG0835	chemotaxis
NUT31_RS21930	COG0840	transmembrane signaling receptor activity
NUT31_RS21940	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
NUT31_RS21945	COG2201	protein-glutamate methylesterase activity
NUT31_RS21950	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine