locus-tag class description JC622_RS00005 PF00308 Bacterial dnaA protein JC622_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JC622_RS00005 PF11638 DnaA N-terminal domain JC622_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JC622_RS00010 PF02767 DNA polymerase III beta subunit, central domain JC622_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JC622_RS00015 PF02463 RecF/RecN/SMC N terminal domain JC622_RS00020 PF01751 Toprim domain JC622_RS00020 PF18053 DNA gyrase B subunit insert domain JC622_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS00020 PF00204 DNA gyrase B JC622_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus JC622_RS00040 PF06508 Queuosine biosynthesis protein QueC JC622_RS00070 PF01695 IstB-like ATP binding protein JC622_RS00075 PF00665 Integrase core domain JC622_RS00110 PF01965 DJ-1/PfpI family JC622_RS00110 PF12833 Helix-turn-helix domain JC622_RS00115 PF12706 Beta-lactamase superfamily domain JC622_RS00120 PF00011 Hsp20/alpha crystallin family JC622_RS00125 PF00011 Hsp20/alpha crystallin family JC622_RS00130 PF00155 Aminotransferase class I and II JC622_RS00145 PF07690 Major Facilitator Superfamily JC622_RS00150 PF00486 Transcriptional regulatory protein, C terminal JC622_RS00150 PF00072 Response regulator receiver domain JC622_RS00155 PF13492 GAF domain JC622_RS00155 PF02702 Osmosensitive K+ channel His kinase sensor domain JC622_RS00155 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS00155 PF13493 Domain of unknown function (DUF4118) JC622_RS00160 PF02669 K+-transporting ATPase, c chain JC622_RS00170 PF03814 Potassium-transporting ATPase A subunit JC622_RS00175 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS00175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JC622_RS00180 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC622_RS00180 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS00180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS00185 PF00873 AcrB/AcrD/AcrF family JC622_RS00190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JC622_RS00195 PF00440 Bacterial regulatory proteins, tetR family JC622_RS00230 PF12146 Serine aminopeptidase, S33 JC622_RS00235 PF00132 Bacterial transferase hexapeptide (six repeats) JC622_RS00240 PF00588 SpoU rRNA Methylase family JC622_RS00240 PF12105 SpoU, rRNA methylase, C-terminal JC622_RS00245 PF02824 TGS domain JC622_RS00245 PF04607 Region found in RelA / SpoT proteins JC622_RS00245 PF13291 ACT domain JC622_RS00250 PF01192 RNA polymerase Rpb6 JC622_RS00255 PF00625 Guanylate kinase JC622_RS00260 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JC622_RS00275 PF00892 EamA-like transporter family JC622_RS00295 PF03466 LysR substrate binding domain JC622_RS00295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS00300 PF00579 tRNA synthetases class I (W and Y) JC622_RS00305 PF00582 Universal stress protein family JC622_RS00310 PF07055 Enoyl reductase FAD binding domain JC622_RS00310 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JC622_RS00310 PF12241 Trans-2-enoyl-CoA reductase catalytic region JC622_RS00315 PF00210 Ferritin-like domain JC622_RS00325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS00325 PF06580 Histidine kinase JC622_RS00325 PF07694 5TMR of 5TMR-LYT JC622_RS00330 PF00072 Response regulator receiver domain JC622_RS00330 PF04397 LytTr DNA-binding domain JC622_RS00335 PF07690 Major Facilitator Superfamily JC622_RS00340 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JC622_RS00340 PF02222 ATP-grasp domain JC622_RS00345 PF00731 AIR carboxylase JC622_RS00360 PF03466 LysR substrate binding domain JC622_RS00360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS00365 PF00593 TonB dependent receptor JC622_RS00365 PF07715 TonB-dependent Receptor Plug Domain JC622_RS00370 PF01177 Asp/Glu/Hydantoin racemase JC622_RS00410 PF00356 Bacterial regulatory proteins, lacI family JC622_RS00415 PF02837 Glycosyl hydrolases family 2, sugar binding domain JC622_RS00415 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JC622_RS00415 PF00703 Glycosyl hydrolases family 2 JC622_RS00415 PF16353 Domain of unknown function(DUF4981) JC622_RS00415 PF02929 Beta galactosidase small chain JC622_RS00420 PF04074 YhcH/YjgK/YiaL JC622_RS00425 PF13520 Amino acid permease JC622_RS00430 PF01588 Putative tRNA binding domain JC622_RS00435 PF13520 Amino acid permease JC622_RS00440 PF13593 SBF-like CPA transporter family (DUF4137) JC622_RS00445 PF12867 DinB superfamily JC622_RS00445 PF03781 Sulfatase-modifying factor enzyme 1 JC622_RS00455 PF00756 Putative esterase JC622_RS00460 PF08240 Alcohol dehydrogenase GroES-like domain JC622_RS00460 PF00107 Zinc-binding dehydrogenase JC622_RS00465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS00465 PF03466 LysR substrate binding domain JC622_RS00470 PF08340 Domain of unknown function (DUF1732) JC622_RS00470 PF03755 YicC-like family, N-terminal region JC622_RS00475 PF01138 3' exoribonuclease family, domain 1 JC622_RS00475 PF03725 3' exoribonuclease family, domain 2 JC622_RS00480 PF00156 Phosphoribosyl transferase domain JC622_RS00485 PF00403 Heavy-metal-associated domain JC622_RS00490 PF13411 MerR HTH family regulatory protein JC622_RS00495 PF01590 GAF domain JC622_RS00495 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS00495 PF00360 Phytochrome region JC622_RS00495 PF00563 EAL domain JC622_RS00500 PF06288 Protein of unknown function (DUF1040) JC622_RS00505 PF12801 4Fe-4S binding domain JC622_RS00505 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase JC622_RS00505 PF13746 4Fe-4S dicluster domain JC622_RS00510 PF01636 Phosphotransferase enzyme family JC622_RS00515 PF01323 DSBA-like thioredoxin domain JC622_RS00520 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JC622_RS00520 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JC622_RS00525 PF00857 Isochorismatase family JC622_RS00535 PF04463 Protein of unknown function (DUF523) JC622_RS00540 PF01553 Acyltransferase JC622_RS00545 PF01553 Acyltransferase JC622_RS00550 PF01078 Magnesium chelatase, subunit ChlI JC622_RS00550 PF13335 Magnesium chelatase, subunit ChlI C-terminal JC622_RS00555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JC622_RS00555 PF00205 Thiamine pyrophosphate enzyme, central domain JC622_RS00555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC622_RS00565 PF01063 Amino-transferase class IV JC622_RS00570 PF00920 Dehydratase family JC622_RS00575 PF00585 C-terminal regulatory domain of Threonine dehydratase JC622_RS00575 PF00291 Pyridoxal-phosphate dependent enzyme JC622_RS00580 PF01389 OmpA-like transmembrane domain JC622_RS00580 PF00691 OmpA family JC622_RS00585 PF04143 Sulphur transport JC622_RS00590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS00595 PF00892 EamA-like transporter family JC622_RS00600 PF00171 Aldehyde dehydrogenase family JC622_RS00605 PF01381 Helix-turn-helix JC622_RS00605 PF07883 Cupin domain JC622_RS00610 PF00202 Aminotransferase class-III JC622_RS00615 PF00171 Aldehyde dehydrogenase family JC622_RS00620 PF02540 NAD synthase JC622_RS00620 PF00117 Glutamine amidotransferase class-I JC622_RS00620 PF00958 GMP synthase C terminal domain JC622_RS00625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS00625 PF03466 LysR substrate binding domain JC622_RS00630 PF00294 pfkB family carbohydrate kinase JC622_RS00635 PF02082 Transcriptional regulator JC622_RS00650 PF02646 RmuC family JC622_RS00655 PF00962 Adenosine/AMP deaminase JC622_RS00660 PF02954 Bacterial regulatory protein, Fis family JC622_RS00660 PF00072 Response regulator receiver domain JC622_RS00660 PF00158 Sigma-54 interaction domain JC622_RS00665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS00665 PF00989 PAS fold JC622_RS00665 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS00675 PF03951 Glutamine synthetase, beta-Grasp domain JC622_RS00675 PF00120 Glutamine synthetase, catalytic domain JC622_RS00680 PF00009 Elongation factor Tu GTP binding domain JC622_RS00680 PF03144 Elongation factor Tu domain 2 JC622_RS00680 PF00679 Elongation factor G C-terminus JC622_RS00685 PF02386 Cation transport protein JC622_RS00690 PF02254 TrkA-N domain JC622_RS00690 PF02080 TrkA-C domain JC622_RS00695 PF01029 NusB family JC622_RS00695 PF01189 16S rRNA methyltransferase RsmB/F JC622_RS00700 PF02911 Formyl transferase, C-terminal domain JC622_RS00700 PF00551 Formyl transferase JC622_RS00705 PF01327 Polypeptide deformylase JC622_RS00710 PF01476 LysM domain JC622_RS00715 PF17782 DprA winged helix domain JC622_RS00715 PF02481 DNA recombination-mediator protein A JC622_RS00720 PF04361 Protein of unknown function (DUF494) JC622_RS00725 PF01396 Topoisomerase DNA binding C4 zinc finger JC622_RS00730 PF00731 AIR carboxylase JC622_RS00735 PF01300 Telomere recombination JC622_RS00740 PF01218 Coproporphyrinogen III oxidase JC622_RS00745 PF08501 Shikimate dehydrogenase substrate binding domain JC622_RS00745 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JC622_RS00745 PF01488 Shikimate / quinate 5-dehydrogenase JC622_RS00750 PF07369 Protein of unknown function (DUF1488) JC622_RS00755 PF01926 50S ribosome-binding GTPase JC622_RS00760 PF00034 Cytochrome c JC622_RS00765 PF04220 Der GTPase activator (YihI) JC622_RS00770 PF10675 Protein of unknown function (DUF2489) JC622_RS00775 PF06969 HemN C-terminal domain JC622_RS00775 PF04055 Radical SAM superfamily JC622_RS00800 PF00696 Amino acid kinase family JC622_RS00805 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JC622_RS00805 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JC622_RS00810 PF03606 C4-dicarboxylate anaerobic carrier JC622_RS00815 PF02863 Arginine repressor, C-terminal domain JC622_RS00815 PF01316 Arginine repressor, DNA binding domain JC622_RS00820 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain JC622_RS00820 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain JC622_RS00825 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JC622_RS00825 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JC622_RS00845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS00845 PF03466 LysR substrate binding domain JC622_RS00855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS00855 PF02743 Cache domain JC622_RS00855 PF00672 HAMP domain JC622_RS00860 PF08212 Lipocalin-like domain JC622_RS00865 PF12833 Helix-turn-helix domain JC622_RS00865 PF06719 AraC-type transcriptional regulator N-terminus JC622_RS00870 PF00465 Iron-containing alcohol dehydrogenase JC622_RS00875 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JC622_RS00875 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JC622_RS00875 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JC622_RS00880 PF02233 NAD(P) transhydrogenase beta subunit JC622_RS00890 PF13309 HTH domain JC622_RS00890 PF08348 YheO-like PAS domain JC622_RS00895 PF03313 Serine dehydratase alpha chain JC622_RS00900 PF00375 Sodium:dicarboxylate symporter family JC622_RS00905 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS00905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JC622_RS00910 PF13525 Outer membrane lipoprotein JC622_RS00915 PF00849 RNA pseudouridylate synthase JC622_RS00915 PF01479 S4 domain JC622_RS00920 PF02578 Multi-copper polyphenol oxidoreductase laccase JC622_RS00925 PF00004 ATPase family associated with various cellular activities (AAA) JC622_RS00925 PF07724 AAA domain (Cdc48 subfamily) JC622_RS00925 PF17871 AAA lid domain JC622_RS00925 PF02861 Clp amino terminal domain, pathogenicity island component JC622_RS00925 PF10431 C-terminal, D2-small domain, of ClpB protein JC622_RS00930 PF03590 Aspartate-ammonia ligase JC622_RS00935 PF01037 Lrp/AsnC ligand binding domain JC622_RS00945 PF10063 Uncharacterized integral membrane protein (DUF2301) JC622_RS00950 PF00478 IMP dehydrogenase / GMP reductase domain JC622_RS00950 PF00571 CBS domain JC622_RS00970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS00970 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS00980 PF00072 Response regulator receiver domain JC622_RS00980 PF00158 Sigma-54 interaction domain JC622_RS00985 PF06496 Protein of unknown function (DUF1097) JC622_RS00990 PF00174 Oxidoreductase molybdopterin binding domain JC622_RS00995 PF01794 Ferric reductase like transmembrane component JC622_RS01010 PF00072 Response regulator receiver domain JC622_RS01010 PF00486 Transcriptional regulatory protein, C terminal JC622_RS01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS01025 PF00384 Molybdopterin oxidoreductase JC622_RS01025 PF18364 Molybdopterin oxidoreductase N-terminal domain JC622_RS01025 PF01568 Molydopterin dinucleotide binding domain JC622_RS01030 PF03264 NapC/NirT cytochrome c family, N-terminal region JC622_RS01035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS01035 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC622_RS01035 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS01045 PF01131 DNA topoisomerase JC622_RS01045 PF01751 Toprim domain JC622_RS01065 PF02386 Cation transport protein JC622_RS01070 PF02080 TrkA-C domain JC622_RS01070 PF02254 TrkA-N domain JC622_RS01075 PF01565 FAD binding domain JC622_RS01075 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JC622_RS01080 PF03099 Biotin/lipoate A/B protein ligase family JC622_RS01080 PF08279 HTH domain JC622_RS01080 PF02237 Biotin protein ligase C terminal domain JC622_RS01085 PF00485 Phosphoribulokinase / Uridine kinase family JC622_RS01100 PF00009 Elongation factor Tu GTP binding domain JC622_RS01100 PF03144 Elongation factor Tu domain 2 JC622_RS01100 PF03143 Elongation factor Tu C-terminal domain JC622_RS01110 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JC622_RS01115 PF02357 Transcription termination factor nusG JC622_RS01115 PF00467 KOW motif JC622_RS01120 PF03946 Ribosomal protein L11, N-terminal domain JC622_RS01120 PF00298 Ribosomal protein L11, RNA binding domain JC622_RS01125 PF00687 Ribosomal protein L1p/L10e family JC622_RS01130 PF00466 Ribosomal protein L10 JC622_RS01135 PF16320 Ribosomal protein L7/L12 dimerisation domain JC622_RS01135 PF00542 Ribosomal protein L7/L12 C-terminal domain JC622_RS01140 PF04563 RNA polymerase beta subunit JC622_RS01140 PF04561 RNA polymerase Rpb2, domain 2 JC622_RS01140 PF04565 RNA polymerase Rpb2, domain 3 JC622_RS01140 PF10385 RNA polymerase beta subunit external 1 domain JC622_RS01140 PF00562 RNA polymerase Rpb2, domain 6 JC622_RS01140 PF04560 RNA polymerase Rpb2, domain 7 JC622_RS01145 PF04997 RNA polymerase Rpb1, domain 1 JC622_RS01145 PF00623 RNA polymerase Rpb1, domain 2 JC622_RS01145 PF04998 RNA polymerase Rpb1, domain 5 JC622_RS01145 PF05000 RNA polymerase Rpb1, domain 4 JC622_RS01145 PF04983 RNA polymerase Rpb1, domain 3 JC622_RS01150 PF08348 YheO-like PAS domain JC622_RS01150 PF13309 HTH domain JC622_RS01155 PF01042 Endoribonuclease L-PSP JC622_RS01160 PF02635 DsrE/DsrF-like family JC622_RS01165 PF02635 DsrE/DsrF-like family JC622_RS01170 PF04077 DsrH like protein JC622_RS01175 PF00164 Ribosomal protein S12/S23 JC622_RS01180 PF00177 Ribosomal protein S7p/S5e JC622_RS01185 PF00679 Elongation factor G C-terminus JC622_RS01185 PF00009 Elongation factor Tu GTP binding domain JC622_RS01185 PF03764 Elongation factor G, domain IV JC622_RS01185 PF03144 Elongation factor Tu domain 2 JC622_RS01185 PF14492 Elongation Factor G, domain II JC622_RS01190 PF00009 Elongation factor Tu GTP binding domain JC622_RS01190 PF03144 Elongation factor Tu domain 2 JC622_RS01190 PF03143 Elongation factor Tu C-terminal domain JC622_RS01255 PF06964 Alpha-L-arabinofuranosidase C-terminal domain JC622_RS01265 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JC622_RS01265 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JC622_RS01270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS01270 PF03466 LysR substrate binding domain JC622_RS01275 PF02733 Dak1 domain JC622_RS01280 PF02734 DAK2 domain JC622_RS01285 PF07055 Enoyl reductase FAD binding domain JC622_RS01285 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JC622_RS01285 PF12241 Trans-2-enoyl-CoA reductase catalytic region JC622_RS01300 PF02733 Dak1 domain JC622_RS01305 PF00596 Class II Aldolase and Adducin N-terminal domain JC622_RS01315 PF03611 PTS system sugar-specific permease component JC622_RS01320 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC622_RS01340 PF13443 Cro/C1-type HTH DNA-binding domain JC622_RS01385 PF00440 Bacterial regulatory proteins, tetR family JC622_RS01400 PF07947 YhhN family JC622_RS01405 PF07690 Major Facilitator Superfamily JC622_RS01410 PF13533 Biotin-lipoyl like JC622_RS01415 PF03466 LysR substrate binding domain JC622_RS01415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS01425 PF00375 Sodium:dicarboxylate symporter family JC622_RS01430 PF10678 Protein of unknown function (DUF2492) JC622_RS01435 PF01914 MarC family integral membrane protein JC622_RS01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS01440 PF03466 LysR substrate binding domain JC622_RS01445 PF02416 mttA/Hcf106 family JC622_RS01455 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC622_RS01455 PF01464 Transglycosylase SLT domain JC622_RS01465 PF13091 PLD-like domain JC622_RS01480 PF00326 Prolyl oligopeptidase family JC622_RS01480 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JC622_RS01495 PF00106 short chain dehydrogenase JC622_RS01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS01500 PF03466 LysR substrate binding domain JC622_RS01505 PF02525 Flavodoxin-like fold JC622_RS01510 PF00999 Sodium/hydrogen exchanger family JC622_RS01510 PF02254 TrkA-N domain JC622_RS01535 PF00448 SRP54-type protein, GTPase domain JC622_RS01535 PF02881 SRP54-type protein, helical bundle domain JC622_RS01540 PF00005 ABC transporter JC622_RS01545 PF18075 FtsX extracellular domain JC622_RS01550 PF00140 Sigma-70 factor, region 1.2 JC622_RS01550 PF04542 Sigma-70 region 2 JC622_RS01550 PF04545 Sigma-70, region 4 JC622_RS01555 PF00484 Carbonic anhydrase JC622_RS01560 PF07702 UTRA domain JC622_RS01560 PF00392 Bacterial regulatory proteins, gntR family JC622_RS01565 PF01979 Amidohydrolase family JC622_RS01570 PF00491 Arginase family JC622_RS01575 PF01175 Urocanase Rossmann-like domain JC622_RS01575 PF17392 Urocanase C-terminal domain JC622_RS01575 PF17391 Urocanase N-terminal domain JC622_RS01580 PF00221 Aromatic amino acid lyase JC622_RS01585 PF01699 Sodium/calcium exchanger protein JC622_RS01590 PF12792 CSS motif domain associated with EAL JC622_RS01590 PF00563 EAL domain JC622_RS01595 PF00563 EAL domain JC622_RS01595 PF17157 Gammaproteobacterial periplasmic sensor domain JC622_RS01595 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS01630 PF01609 Transposase DDE domain JC622_RS01660 PF00437 Type II/IV secretion system protein JC622_RS01660 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JC622_RS01665 PF00482 Type II secretion system (T2SS), protein F JC622_RS01685 PF14245 Type IV pilin PilA JC622_RS01685 PF07963 Prokaryotic N-terminal methylation motif JC622_RS01715 PF04085 rod shape-determining protein MreC JC622_RS01720 PF04093 rod shape-determining protein MreD JC622_RS01725 PF02545 Maf-like protein JC622_RS01730 PF10150 Ribonuclease E/G family JC622_RS01730 PF00575 S1 RNA binding domain JC622_RS01735 PF13502 AsmA-like C-terminal region JC622_RS01735 PF13116 Protein of unknown function JC622_RS01750 PF00795 Carbon-nitrogen hydrolase JC622_RS01755 PF01523 Putative modulator of DNA gyrase JC622_RS01765 PF01914 MarC family integral membrane protein JC622_RS01770 PF07690 Major Facilitator Superfamily JC622_RS01780 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JC622_RS01805 PF00999 Sodium/hydrogen exchanger family JC622_RS01810 PF02965 Vitamin B12 dependent methionine synthase, activation domain JC622_RS01810 PF00809 Pterin binding enzyme JC622_RS01810 PF02574 Homocysteine S-methyltransferase JC622_RS01810 PF02310 B12 binding domain JC622_RS01810 PF02607 B12 binding domain JC622_RS01815 PF08443 RimK-like ATP-grasp domain JC622_RS01815 PF18030 RimK PreATP-grasp domain JC622_RS01820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS01825 PF00072 Response regulator receiver domain JC622_RS01825 PF00486 Transcriptional regulatory protein, C terminal JC622_RS01840 PF17425 Arylsulfotransferase Ig-like domain JC622_RS01840 PF05935 Arylsulfotransferase (ASST) JC622_RS01850 PF13667 ThiC-associated domain JC622_RS01850 PF01964 Radical SAM ThiC family JC622_RS01855 PF02581 Thiamine monophosphate synthase JC622_RS01860 PF00899 ThiF family JC622_RS01870 PF05690 Thiazole biosynthesis protein ThiG JC622_RS01875 PF04055 Radical SAM superfamily JC622_RS01875 PF06968 Biotin and Thiamin Synthesis associated domain JC622_RS01905 PF04073 Aminoacyl-tRNA editing domain JC622_RS01915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS01915 PF03466 LysR substrate binding domain JC622_RS01920 PF03788 LrgA family JC622_RS01925 PF04172 LrgB-like family JC622_RS01935 PF01734 Patatin-like phospholipase JC622_RS01940 PF05192 MutS domain III JC622_RS01940 PF05190 MutS family domain IV JC622_RS01940 PF01624 MutS domain I JC622_RS01940 PF00488 MutS domain V JC622_RS01940 PF05188 MutS domain II JC622_RS01945 PF02464 Competence-damaged protein JC622_RS01950 PF00154 recA bacterial DNA recombination protein JC622_RS01955 PF02631 RecX family JC622_RS01960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC622_RS01960 PF01411 tRNA synthetases class II (A) JC622_RS01960 PF02272 DHHA1 domain JC622_RS01965 PF13840 ACT domain JC622_RS01965 PF01842 ACT domain JC622_RS01965 PF00696 Amino acid kinase family JC622_RS01970 PF02599 Global regulator protein family JC622_RS02005 PF00768 D-alanyl-D-alanine carboxypeptidase JC622_RS02010 PF09335 SNARE associated Golgi protein JC622_RS02015 PF01595 Cyclin M transmembrane N-terminal domain JC622_RS02015 PF00571 CBS domain JC622_RS02015 PF03471 Transporter associated domain JC622_RS02020 PF00710 Asparaginase, N-terminal JC622_RS02020 PF17763 Glutaminase/Asparaginase C-terminal domain JC622_RS02025 PF00403 Heavy-metal-associated domain JC622_RS02025 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS02025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JC622_RS02035 PF00356 Bacterial regulatory proteins, lacI family JC622_RS02040 PF02378 Phosphotransferase system, EIIC JC622_RS02040 PF00367 phosphotransferase system, EIIB JC622_RS02045 PF00128 Alpha amylase, catalytic domain JC622_RS02045 PF11941 Domain of unknown function (DUF3459) JC622_RS02060 PF00849 RNA pseudouridylate synthase JC622_RS02065 PF00271 Helicase conserved C-terminal domain JC622_RS02065 PF12137 RNA polymerase recycling family C-terminal JC622_RS02065 PF00176 SNF2 family N-terminal domain JC622_RS02065 PF18339 RapA N-terminal Tudor like domain 1 JC622_RS02065 PF18337 RapA N-terminal Tudor like domain JC622_RS02095 PF13462 Thioredoxin JC622_RS02095 PF06965 Na+/H+ antiporter 1 JC622_RS02110 PF00202 Aminotransferase class-III JC622_RS02115 PF00654 Voltage gated chloride channel JC622_RS02125 PF01521 Iron-sulphur cluster biosynthesis JC622_RS02130 PF03553 Na+/H+ antiporter family JC622_RS02170 PF08323 Starch synthase catalytic domain JC622_RS02170 PF00534 Glycosyl transferases group 1 JC622_RS02175 PF00483 Nucleotidyl transferase JC622_RS02180 PF05175 Methyltransferase small domain JC622_RS02180 PF08468 Methyltransferase small domain N-terminal JC622_RS02185 PF00701 Dihydrodipicolinate synthetase family JC622_RS02195 PF01865 Protein of unknown function DUF47 JC622_RS02200 PF01384 Phosphate transporter family JC622_RS02205 PF00696 Amino acid kinase family JC622_RS02205 PF00742 Homoserine dehydrogenase JC622_RS02205 PF03447 Homoserine dehydrogenase, NAD binding domain JC622_RS02210 PF01053 Cys/Met metabolism PLP-dependent enzyme JC622_RS02215 PF01340 Met Apo-repressor, MetJ JC622_RS02220 PF12833 Helix-turn-helix domain JC622_RS02220 PF02311 AraC-like ligand binding domain JC622_RS02225 PF01588 Putative tRNA binding domain JC622_RS02230 PF03222 Tryptophan/tyrosine permease family JC622_RS02235 PF00459 Inositol monophosphatase family JC622_RS02240 PF00293 NUDIX domain JC622_RS02245 PF13419 Haloacid dehalogenase-like hydrolase JC622_RS02260 PF12464 Maltose acetyltransferase JC622_RS02260 PF14602 Hexapeptide repeat of succinyl-transferase JC622_RS02265 PF13194 Domain of unknown function (DUF4010) JC622_RS02270 PF18416 N-acetylglucosamine binding protein domain 2 JC622_RS02270 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JC622_RS02275 PF12729 Four helix bundle sensory module for signal transduction JC622_RS02275 PF00672 HAMP domain JC622_RS02275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS02290 PF14883 Hypothetical glycosyl hydrolase family 13 JC622_RS02290 PF01522 Polysaccharide deacetylase JC622_RS02295 PF00535 Glycosyl transferase family 2 JC622_RS02305 PF00970 Oxidoreductase FAD-binding domain JC622_RS02305 PF00175 Oxidoreductase NAD-binding domain JC622_RS02305 PF00111 2Fe-2S iron-sulfur cluster binding domain JC622_RS02330 PF11230 Protein of unknown function (DUF3029) JC622_RS02335 PF04055 Radical SAM superfamily JC622_RS02345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS02345 PF03466 LysR substrate binding domain JC622_RS02350 PF00155 Aminotransferase class I and II JC622_RS02355 PF02583 Metal-sensitive transcriptional repressor JC622_RS02370 PF17967 Pullulanase N2 domain JC622_RS02370 PF03714 Bacterial pullanase-associated domain JC622_RS02370 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JC622_RS02370 PF18494 Pullulanase Ins domain JC622_RS02370 PF11852 Domain of unknown function (DUF3372) JC622_RS02375 PF00403 Heavy-metal-associated domain JC622_RS02380 PF08534 Redoxin JC622_RS02390 PF00270 DEAD/DEAH box helicase JC622_RS02390 PF00271 Helicase conserved C-terminal domain JC622_RS02400 PF03372 Endonuclease/Exonuclease/phosphatase family JC622_RS02420 PF06062 Uncharacterised protein family (UPF0231) JC622_RS02425 PF13556 PucR C-terminal helix-turn-helix domain JC622_RS02425 PF05651 Putative sugar diacid recognition JC622_RS02425 PF17853 GGDEF-like domain JC622_RS02430 PF02447 GntP family permease JC622_RS02435 PF02595 Glycerate kinase family JC622_RS02445 PF00255 Glutathione peroxidase JC622_RS02450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS02450 PF03466 LysR substrate binding domain JC622_RS02455 PF01773 Na+ dependent nucleoside transporter N-terminus JC622_RS02455 PF07670 Nucleoside recognition JC622_RS02455 PF07662 Na+ dependent nucleoside transporter C-terminus JC622_RS02465 PF02594 Uncharacterised ACR, YggU family COG1872 JC622_RS02470 PF02325 YGGT family JC622_RS02475 PF03807 NADP oxidoreductase coenzyme F420-dependent JC622_RS02475 PF14748 Pyrroline-5-carboxylate reductase dimerisation JC622_RS02480 PF01168 Alanine racemase, N-terminal domain JC622_RS02485 PF00437 Type II/IV secretion system protein JC622_RS02490 PF00437 Type II/IV secretion system protein JC622_RS02495 PF03883 Peroxide stress protein YaaA JC622_RS02505 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JC622_RS02505 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JC622_RS02510 PF00472 RF-1 domain JC622_RS02515 PF00543 Nitrogen regulatory protein P-II JC622_RS02520 PF13416 Bacterial extracellular solute-binding protein JC622_RS02530 PF00005 ABC transporter JC622_RS02530 PF08402 TOBE domain JC622_RS02535 PF04261 Dyp-type peroxidase family JC622_RS02540 PF01316 Arginine repressor, DNA binding domain JC622_RS02540 PF02863 Arginine repressor, C-terminal domain JC622_RS02545 PF00005 ABC transporter JC622_RS02550 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC622_RS02555 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS02560 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS02565 PF00056 lactate/malate dehydrogenase, NAD binding domain JC622_RS02565 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JC622_RS02570 PF08238 Sel1 repeat JC622_RS02575 PF00970 Oxidoreductase FAD-binding domain JC622_RS02575 PF00042 Globin JC622_RS02575 PF00175 Oxidoreductase NAD-binding domain JC622_RS02580 PF02082 Transcriptional regulator JC622_RS02585 PF03471 Transporter associated domain JC622_RS02585 PF01595 Cyclin M transmembrane N-terminal domain JC622_RS02585 PF00571 CBS domain JC622_RS02590 PF01578 Cytochrome C assembly protein JC622_RS02595 PF02978 Signal peptide binding domain JC622_RS02595 PF02881 SRP54-type protein, helical bundle domain JC622_RS02595 PF00448 SRP54-type protein, GTPase domain JC622_RS02600 PF00886 Ribosomal protein S16 JC622_RS02605 PF01782 RimM N-terminal domain JC622_RS02605 PF05239 PRC-barrel domain JC622_RS02610 PF01746 tRNA (Guanine-1)-methyltransferase JC622_RS02615 PF01245 Ribosomal protein L19 JC622_RS02625 PF02976 DNA mismatch repair enzyme MutH JC622_RS02630 PF00293 NUDIX domain JC622_RS02635 PF05524 PEP-utilising enzyme, N-terminal JC622_RS02635 PF01590 GAF domain JC622_RS02635 PF00391 PEP-utilising enzyme, mobile domain JC622_RS02635 PF02896 PEP-utilising enzyme, TIM barrel domain JC622_RS02640 PF01790 Prolipoprotein diacylglyceryl transferase JC622_RS02645 PF00303 Thymidylate synthase JC622_RS02650 PF02899 Phage integrase, N-terminal SAM-like domain JC622_RS02650 PF00589 Phage integrase family JC622_RS02670 PF00303 Thymidylate synthase JC622_RS02695 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS02695 PF18113 Rubredoxin binding C-terminal domain JC622_RS02700 PF00258 Flavodoxin JC622_RS02700 PF00753 Metallo-beta-lactamase superfamily JC622_RS02700 PF00301 Rubredoxin JC622_RS02705 PF01590 GAF domain JC622_RS02705 PF00158 Sigma-54 interaction domain JC622_RS02710 PF00196 Bacterial regulatory proteins, luxR family JC622_RS02710 PF00072 Response regulator receiver domain JC622_RS02720 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS02720 PF05230 MASE2 domain JC622_RS02730 PF13185 GAF domain JC622_RS02730 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS02735 PF02743 Cache domain JC622_RS02735 PF00672 HAMP domain JC622_RS02735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS02740 PF00665 Integrase core domain JC622_RS02745 PF01695 IstB-like ATP binding protein JC622_RS02750 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS02755 PF09722 Protein of unknown function (DUF2384) JC622_RS02765 PF00816 H-NS histone family JC622_RS02795 PF06965 Na+/H+ antiporter 1 JC622_RS02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS02805 PF03466 LysR substrate binding domain JC622_RS02810 PF01022 Bacterial regulatory protein, arsR family JC622_RS02815 PF01649 Ribosomal protein S20 JC622_RS02820 PF03023 Lipid II flippase MurJ JC622_RS02825 PF06574 FAD synthetase JC622_RS02825 PF01687 Riboflavin kinase JC622_RS02830 PF08264 Anticodon-binding domain of tRNA JC622_RS02830 PF00133 tRNA synthetases class I (I, L, M and V) JC622_RS02830 PF06827 Zinc finger found in FPG and IleRS JC622_RS02835 PF01252 Signal peptidase (SPase) II JC622_RS02840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JC622_RS02845 PF02401 LytB protein JC622_RS02850 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor JC622_RS02850 PF07963 Prokaryotic N-terminal methylation motif JC622_RS02870 PF05567 Neisseria PilC beta-propeller domain JC622_RS02890 PF02540 NAD synthase JC622_RS02890 PF00795 Carbon-nitrogen hydrolase JC622_RS02895 PF00543 Nitrogen regulatory protein P-II JC622_RS02905 PF02664 S-Ribosylhomocysteinase (LuxS) JC622_RS02910 PF07963 Prokaryotic N-terminal methylation motif JC622_RS02915 PF01026 TatD related DNase JC622_RS02920 PF01773 Na+ dependent nucleoside transporter N-terminus JC622_RS02920 PF07662 Na+ dependent nucleoside transporter C-terminus JC622_RS02920 PF07670 Nucleoside recognition JC622_RS02930 PF01791 DeoC/LacD family aldolase JC622_RS02935 PF02885 Glycosyl transferase family, helical bundle domain JC622_RS02935 PF00591 Glycosyl transferase family, a/b domain JC622_RS02935 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JC622_RS02940 PF01676 Metalloenzyme superfamily JC622_RS02945 PF01048 Phosphorylase superfamily JC622_RS02955 PF18429 Domain of unknown function (DUF5609) JC622_RS02970 PF18073 Rubredoxin metal binding domain JC622_RS02975 PF07238 PilZ domain JC622_RS02980 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ JC622_RS02985 PF00216 Bacterial DNA-binding protein JC622_RS02995 PF02272 DHHA1 domain JC622_RS02995 PF01411 tRNA synthetases class II (A) JC622_RS02995 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC622_RS03000 PF01566 Natural resistance-associated macrophage protein JC622_RS03005 PF01250 Ribosomal protein S6 JC622_RS03010 PF01084 Ribosomal protein S18 JC622_RS03015 PF03948 Ribosomal protein L9, C-terminal domain JC622_RS03015 PF01281 Ribosomal protein L9, N-terminal domain JC622_RS03020 PF00970 Oxidoreductase FAD-binding domain JC622_RS03020 PF00175 Oxidoreductase NAD-binding domain JC622_RS03045 PF00107 Zinc-binding dehydrogenase JC622_RS03045 PF08240 Alcohol dehydrogenase GroES-like domain JC622_RS03050 PF09335 SNARE associated Golgi protein JC622_RS03055 PF05193 Peptidase M16 inactive domain JC622_RS03055 PF00675 Insulinase (Peptidase family M16) JC622_RS03060 PF04262 Glutamate-cysteine ligase JC622_RS03065 PF00501 AMP-binding enzyme JC622_RS03075 PF00583 Acetyltransferase (GNAT) family JC622_RS03075 PF13673 Acetyltransferase (GNAT) domain JC622_RS03085 PF07728 AAA domain (dynein-related subfamily) JC622_RS03085 PF17868 AAA lid domain JC622_RS03085 PF12592 Protein of unknown function (DUF3763) JC622_RS03090 PF05762 VWA domain containing CoxE-like protein JC622_RS03095 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS03105 PF00009 Elongation factor Tu GTP binding domain JC622_RS03105 PF03144 Elongation factor Tu domain 2 JC622_RS03105 PF16658 Class II release factor RF3, C-terminal domain JC622_RS03110 PF00583 Acetyltransferase (GNAT) family JC622_RS03115 PF07690 Major Facilitator Superfamily JC622_RS03120 PF03466 LysR substrate binding domain JC622_RS03120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS03125 PF04151 Bacterial pre-peptidase C-terminal domain JC622_RS03125 PF03413 Peptidase propeptide and YPEB domain JC622_RS03125 PF07504 Fungalysin/Thermolysin Propeptide Motif JC622_RS03125 PF02868 Thermolysin metallopeptidase, alpha-helical domain JC622_RS03125 PF01447 Thermolysin metallopeptidase, catalytic domain JC622_RS03130 PF13302 Acetyltransferase (GNAT) domain JC622_RS03135 PF13302 Acetyltransferase (GNAT) domain JC622_RS03145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JC622_RS03145 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JC622_RS03150 PF07690 Major Facilitator Superfamily JC622_RS03155 PF01725 Ham1 family JC622_RS03160 PF04055 Radical SAM superfamily JC622_RS03160 PF06969 HemN C-terminal domain JC622_RS03165 PF03889 Alternative ribosome-rescue factor A JC622_RS03170 PF13411 MerR HTH family regulatory protein JC622_RS03175 PF01808 AICARFT/IMPCHase bienzyme JC622_RS03175 PF02142 MGS-like domain JC622_RS03180 PF02843 Phosphoribosylglycinamide synthetase, C domain JC622_RS03180 PF02844 Phosphoribosylglycinamide synthetase, N domain JC622_RS03180 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JC622_RS03200 PF04546 Sigma-70, non-essential region JC622_RS03200 PF04542 Sigma-70 region 2 JC622_RS03200 PF03979 Sigma-70 factor, region 1.1 JC622_RS03200 PF00140 Sigma-70 factor, region 1.2 JC622_RS03200 PF04545 Sigma-70, region 4 JC622_RS03200 PF04539 Sigma-70 region 3 JC622_RS03205 PF10410 DnaB-helicase binding domain of primase JC622_RS03205 PF08278 DNA primase DnaG DnaB-binding JC622_RS03205 PF08275 DNA primase catalytic core, N-terminal domain JC622_RS03205 PF01807 CHC2 zinc finger JC622_RS03210 PF09424 Yqey-like protein JC622_RS03215 PF01165 Ribosomal protein S21 JC622_RS03220 PF00814 Glycoprotease family JC622_RS03225 PF03605 Anaerobic c4-dicarboxylate membrane transporter JC622_RS03230 PF00206 Lyase JC622_RS03230 PF10415 Fumarase C C-terminus JC622_RS03235 PF04186 FxsA cytoplasmic membrane protein JC622_RS03240 PF01554 MatE JC622_RS03245 PF00166 Chaperonin 10 Kd subunit JC622_RS03250 PF00118 TCP-1/cpn60 chaperonin family JC622_RS03260 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS03260 PF03707 Bacterial signalling protein N terminal repeat JC622_RS03260 PF00563 EAL domain JC622_RS03295 PF00317 Ribonucleotide reductase, all-alpha domain JC622_RS03295 PF02867 Ribonucleotide reductase, barrel domain JC622_RS03295 PF08343 Ribonucleotide reductase N-terminal JC622_RS03305 PF02562 PhoH-like protein JC622_RS03305 PF13638 PIN domain JC622_RS03310 PF00005 ABC transporter JC622_RS03315 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS03335 PF00694 Aconitase C-terminal domain JC622_RS03340 PF00330 Aconitase family (aconitate hydratase) JC622_RS03345 PF00180 Isocitrate/isopropylmalate dehydrogenase JC622_RS03350 PF08502 LeuA allosteric (dimerisation) domain JC622_RS03350 PF00682 HMGL-like JC622_RS03360 PF01569 PAP2 superfamily JC622_RS03375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC622_RS03375 PF00205 Thiamine pyrophosphate enzyme, central domain JC622_RS03375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JC622_RS03380 PF10369 Small subunit of acetolactate synthase JC622_RS03395 PF02954 Bacterial regulatory protein, Fis family JC622_RS03400 PF01207 Dihydrouridine synthase (Dus) JC622_RS03405 PF02321 Outer membrane efflux protein JC622_RS03410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JC622_RS03440 PF00072 Response regulator receiver domain JC622_RS03450 PF00483 Nucleotidyl transferase JC622_RS03460 PF01515 Phosphate acetyl/butaryl transferase JC622_RS03460 PF07085 DRTGG domain JC622_RS03465 PF00871 Acetokinase family JC622_RS03470 PF04217 Protein of unknown function, DUF412 JC622_RS03475 PF03887 YfbU domain JC622_RS03480 PF00578 AhpC/TSA family JC622_RS03485 PF01842 ACT domain JC622_RS03490 PF00701 Dihydrodipicolinate synthetase family JC622_RS03495 PF06804 NlpB/DapX lipoprotein JC622_RS03500 PF01259 SAICAR synthetase JC622_RS03510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS03510 PF03466 LysR substrate binding domain JC622_RS03515 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JC622_RS03535 PF00989 PAS fold JC622_RS03535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS03535 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS03535 PF01627 Hpt domain JC622_RS03535 PF18415 Histidine kinase receptor ArcB trans-membrane domain JC622_RS03535 PF00072 Response regulator receiver domain JC622_RS03540 PF01966 HD domain JC622_RS03540 PF13286 Phosphohydrolase-associated domain JC622_RS03550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS03550 PF09456 RcsC Alpha-Beta-Loop (ABL) JC622_RS03550 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS03550 PF00072 Response regulator receiver domain JC622_RS03555 PF03707 Bacterial signalling protein N terminal repeat JC622_RS03555 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS03555 PF00563 EAL domain JC622_RS03560 PF12729 Four helix bundle sensory module for signal transduction JC622_RS03560 PF00672 HAMP domain JC622_RS03560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS03565 PF02357 Transcription termination factor nusG JC622_RS03570 PF03180 NLPA lipoprotein JC622_RS03575 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS03580 PF09383 NIL domain JC622_RS03580 PF00005 ABC transporter JC622_RS03590 PF00480 ROK family JC622_RS03600 PF01256 Carbohydrate kinase JC622_RS03600 PF03853 YjeF-related protein N-terminus JC622_RS03605 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JC622_RS03610 PF01520 N-acetylmuramoyl-L-alanine amidase JC622_RS03615 PF01119 DNA mismatch repair protein, C-terminal domain JC622_RS03615 PF08676 MutL C terminal dimerisation domain JC622_RS03625 PF17209 Hfq protein JC622_RS03630 PF16360 GTP-binding GTPase Middle Region JC622_RS03630 PF13167 GTP-binding GTPase N-terminal JC622_RS03630 PF01926 50S ribosome-binding GTPase JC622_RS03635 PF12221 Bacterial membrane protein N terminal JC622_RS03635 PF01145 SPFH domain / Band 7 family JC622_RS03640 PF01145 SPFH domain / Band 7 family JC622_RS03645 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) JC622_RS03650 PF00348 Polyprenyl synthetase JC622_RS03655 PF00829 Ribosomal prokaryotic L21 protein JC622_RS03660 PF01016 Ribosomal L27 protein JC622_RS03665 PF01018 GTP1/OBG JC622_RS03665 PF01926 50S ribosome-binding GTPase JC622_RS03670 PF07670 Nucleoside recognition JC622_RS03680 PF00296 Luciferase-like monooxygenase JC622_RS03690 PF00149 Calcineurin-like phosphoesterase JC622_RS03695 PF04379 ApaG domain JC622_RS03700 PF00398 Ribosomal RNA adenine dimethylase JC622_RS03705 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JC622_RS03710 PF00639 PPIC-type PPIASE domain JC622_RS03710 PF09312 SurA N-terminal domain JC622_RS03715 PF04453 LPS transport system D JC622_RS03715 PF03968 OstA-like protein JC622_RS03720 PF01636 Phosphotransferase enzyme family JC622_RS03725 PF00483 Nucleotidyl transferase JC622_RS03730 PF05099 Tellurite resistance protein TerB JC622_RS03730 PF00226 DnaJ domain JC622_RS03735 PF01546 Peptidase family M20/M25/M40 JC622_RS03735 PF07687 Peptidase dimerisation domain JC622_RS03740 PF00156 Phosphoribosyl transferase domain JC622_RS03745 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) JC622_RS03750 PF07417 Sigma factor-binding transcriptional regulator Crl JC622_RS03755 PF01472 PUA domain JC622_RS03755 PF00696 Amino acid kinase family JC622_RS03760 PF00171 Aldehyde dehydrogenase family JC622_RS03775 PF09905 DNA-binding protein VF530 JC622_RS03780 PF02666 Phosphatidylserine decarboxylase JC622_RS03785 PF03193 RsgA GTPase JC622_RS03790 PF00929 Exonuclease JC622_RS03825 PF00313 'Cold-shock' DNA-binding domain JC622_RS03835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS03835 PF00672 HAMP domain JC622_RS03840 PF00749 tRNA synthetases class I (E and Q), catalytic domain JC622_RS03845 PF00860 Permease family JC622_RS03855 PF12848 ABC transporter JC622_RS03855 PF00005 ABC transporter JC622_RS03870 PF01464 Transglycosylase SLT domain JC622_RS03880 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) JC622_RS03885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS03885 PF03466 LysR substrate binding domain JC622_RS03890 PF01048 Phosphorylase superfamily JC622_RS03895 PF07670 Nucleoside recognition JC622_RS03895 PF07662 Na+ dependent nucleoside transporter C-terminus JC622_RS03895 PF01773 Na+ dependent nucleoside transporter N-terminus JC622_RS03900 PF01791 DeoC/LacD family aldolase JC622_RS03910 PF01370 NAD dependent epimerase/dehydratase family JC622_RS03915 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JC622_RS03915 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JC622_RS03915 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JC622_RS03925 PF00005 ABC transporter JC622_RS03925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC622_RS03930 PF00005 ABC transporter JC622_RS03930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC622_RS03940 PF12911 N-terminal TM domain of oligopeptide transport permease C JC622_RS03940 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS03945 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS03950 PF07715 TonB-dependent Receptor Plug Domain JC622_RS03950 PF00593 TonB dependent receptor JC622_RS03960 PF01618 MotA/TolQ/ExbB proton channel family JC622_RS03965 PF01618 MotA/TolQ/ExbB proton channel family JC622_RS03970 PF02472 Biopolymer transport protein ExbD/TolR JC622_RS03985 PF17969 L,D-transpeptidase C-terminal domain JC622_RS03985 PF03734 L,D-transpeptidase catalytic domain JC622_RS03990 PF01343 Peptidase family S49 JC622_RS03995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JC622_RS03995 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS04000 PF00881 Nitroreductase family JC622_RS04005 PF12464 Maltose acetyltransferase JC622_RS04005 PF00132 Bacterial transferase hexapeptide (six repeats) JC622_RS04010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JC622_RS04010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JC622_RS04020 PF08240 Alcohol dehydrogenase GroES-like domain JC622_RS04020 PF00107 Zinc-binding dehydrogenase JC622_RS04030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS04030 PF03466 LysR substrate binding domain JC622_RS04035 PF00367 phosphotransferase system, EIIB JC622_RS04035 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JC622_RS04035 PF02378 Phosphotransferase system, EIIC JC622_RS04040 PF00474 Sodium:solute symporter family JC622_RS04050 PF02785 Biotin carboxylase C-terminal domain JC622_RS04050 PF00289 Biotin carboxylase, N-terminal domain JC622_RS04050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JC622_RS04055 PF00364 Biotin-requiring enzyme JC622_RS04060 PF01220 Dehydroquinase class II JC622_RS04065 PF16177 Acetyl-coenzyme A synthetase N-terminus JC622_RS04065 PF13193 AMP-binding enzyme C-terminal domain JC622_RS04065 PF00501 AMP-binding enzyme JC622_RS04075 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS04075 PF00563 EAL domain JC622_RS04075 PF03707 Bacterial signalling protein N terminal repeat JC622_RS04085 PF02613 Nitrate reductase delta subunit JC622_RS04090 PF00384 Molybdopterin oxidoreductase JC622_RS04090 PF18364 Molybdopterin oxidoreductase N-terminal domain JC622_RS04090 PF01568 Molydopterin dinucleotide binding domain JC622_RS04095 PF03264 NapC/NirT cytochrome c family, N-terminal region JC622_RS04100 PF00072 Response regulator receiver domain JC622_RS04100 PF00486 Transcriptional regulatory protein, C terminal JC622_RS04110 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JC622_RS04115 PF00672 HAMP domain JC622_RS04115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS04115 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS04115 PF00072 Response regulator receiver domain JC622_RS04115 PF01627 Hpt domain JC622_RS04125 PF00464 Serine hydroxymethyltransferase JC622_RS04130 PF03477 ATP cone domain JC622_RS04135 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JC622_RS04135 PF01872 RibD C-terminal domain JC622_RS04140 PF00677 Lumazine binding domain JC622_RS04145 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JC622_RS04145 PF00925 GTP cyclohydrolase II JC622_RS04150 PF00885 6,7-dimethyl-8-ribityllumazine synthase JC622_RS04155 PF01029 NusB family JC622_RS04160 PF02769 AIR synthase related protein, C-terminal domain JC622_RS04160 PF00586 AIR synthase related protein, N-terminal domain JC622_RS04165 PF04608 Phosphatidylglycerophosphatase A JC622_RS04170 PF00005 ABC transporter JC622_RS04170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC622_RS04175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC622_RS04180 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS04185 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS04185 PF12911 N-terminal TM domain of oligopeptide transport permease C JC622_RS04190 PF04102 SlyX JC622_RS04200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JC622_RS04200 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JC622_RS04205 PF00072 Response regulator receiver domain JC622_RS04205 PF02954 Bacterial regulatory protein, Fis family JC622_RS04205 PF00158 Sigma-54 interaction domain JC622_RS04225 PF02872 5'-nucleotidase, C-terminal domain JC622_RS04225 PF00149 Calcineurin-like phosphoesterase JC622_RS04230 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JC622_RS04230 PF02779 Transketolase, pyrimidine binding domain JC622_RS04230 PF02780 Transketolase, C-terminal domain JC622_RS04235 PF00348 Polyprenyl synthetase JC622_RS04240 PF02609 Exonuclease VII small subunit JC622_RS04245 PF01618 MotA/TolQ/ExbB proton channel family JC622_RS04250 PF13677 Membrane MotB of proton-channel complex MotA/MotB JC622_RS04250 PF00691 OmpA family JC622_RS04255 PF01272 Transcription elongation factor, GreA/GreB, C-term JC622_RS04255 PF03449 Transcription elongation factor, N-terminal JC622_RS04265 PF01985 CRS1 / YhbY (CRM) domain JC622_RS04270 PF01728 FtsJ-like methyltransferase JC622_RS04275 PF01434 Peptidase family M41 JC622_RS04275 PF00004 ATPase family associated with various cellular activities (AAA) JC622_RS04275 PF17862 AAA+ lid domain JC622_RS04275 PF06480 FtsH Extracellular JC622_RS04280 PF00809 Pterin binding enzyme JC622_RS04285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JC622_RS04285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JC622_RS04285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JC622_RS04285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JC622_RS04290 PF00121 Triosephosphate isomerase JC622_RS04295 PF03840 Preprotein translocase SecG subunit JC622_RS04310 PF02576 RimP N-terminal domain JC622_RS04310 PF17384 RimP C-terminal SH3 domain JC622_RS04315 PF13184 NusA-like KH domain JC622_RS04315 PF08529 NusA N-terminal domain JC622_RS04315 PF00575 S1 RNA binding domain JC622_RS04320 PF00009 Elongation factor Tu GTP binding domain JC622_RS04320 PF11987 Translation-initiation factor 2 JC622_RS04320 PF08364 Bacterial translation initiation factor IF-2 associated region JC622_RS04320 PF04760 Translation initiation factor IF-2, N-terminal region JC622_RS04325 PF02033 Ribosome-binding factor A JC622_RS04330 PF09157 Pseudouridine synthase II TruB, C-terminal JC622_RS04330 PF16198 tRNA pseudouridylate synthase B C-terminal domain JC622_RS04330 PF01509 TruB family pseudouridylate synthase (N terminal domain) JC622_RS04335 PF00312 Ribosomal protein S15 JC622_RS04340 PF00575 S1 RNA binding domain JC622_RS04340 PF03725 3' exoribonuclease family, domain 2 JC622_RS04340 PF00013 KH domain JC622_RS04340 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JC622_RS04340 PF01138 3' exoribonuclease family, domain 1 JC622_RS04345 PF01339 CheB methylesterase JC622_RS04345 PF00072 Response regulator receiver domain JC622_RS04350 PF03975 CheD chemotactic sensory transduction JC622_RS04355 PF01739 CheR methyltransferase, SAM binding domain JC622_RS04355 PF03705 CheR methyltransferase, all-alpha domain JC622_RS04360 PF00672 HAMP domain JC622_RS04360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS04365 PF01584 CheW-like domain JC622_RS04370 PF12729 Four helix bundle sensory module for signal transduction JC622_RS04370 PF00672 HAMP domain JC622_RS04370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS04385 PF00072 Response regulator receiver domain JC622_RS04390 PF02743 Cache domain JC622_RS04390 PF00672 HAMP domain JC622_RS04390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS04395 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JC622_RS04395 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JC622_RS04400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS04400 PF03466 LysR substrate binding domain JC622_RS04405 PF01810 LysE type translocator JC622_RS04410 PF01136 Peptidase family U32 JC622_RS04410 PF12392 Collagenase JC622_RS04415 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JC622_RS04415 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JC622_RS04425 PF07963 Prokaryotic N-terminal methylation motif JC622_RS04425 PF00114 Pilin (bacterial filament) JC622_RS04455 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JC622_RS04480 PF00106 short chain dehydrogenase JC622_RS04485 PF03573 outer membrane porin, OprD family JC622_RS04490 PF00672 HAMP domain JC622_RS04490 PF16591 Helical bimodular sensor domain JC622_RS04490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS04520 PF02661 Fic/DOC family JC622_RS04520 PF13784 Fic/DOC family N-terminal JC622_RS04525 PF11799 impB/mucB/samB family C-terminal domain JC622_RS04525 PF00817 impB/mucB/samB family JC622_RS04525 PF13438 Domain of unknown function (DUF4113) JC622_RS04525 PF11798 IMS family HHH motif JC622_RS04530 PF00717 Peptidase S24-like JC622_RS04545 PF02384 N-6 DNA Methylase JC622_RS04545 PF12161 HsdM N-terminal domain JC622_RS04570 PF00483 Nucleotidyl transferase JC622_RS04595 PF18766 SWI2/SNF2 ATPase JC622_RS04595 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JC622_RS04595 PF11867 Domain of unknown function (DUF3387) JC622_RS04635 PF04002 RadC-like JAB domain JC622_RS04655 PF09588 YqaJ-like viral recombinase domain JC622_RS04685 PF01817 Chorismate mutase type II JC622_RS04685 PF00800 Prephenate dehydratase JC622_RS04700 PF06508 Queuosine biosynthesis protein QueC JC622_RS04715 PF08349 Protein of unknown function (DUF1722) JC622_RS04720 PF13411 MerR HTH family regulatory protein JC622_RS04725 PF00875 DNA photolyase JC622_RS04725 PF03441 FAD binding domain of DNA photolyase JC622_RS04735 PF00106 short chain dehydrogenase JC622_RS04780 PF02424 ApbE family JC622_RS04785 PF00970 Oxidoreductase FAD-binding domain JC622_RS04785 PF00111 2Fe-2S iron-sulfur cluster binding domain JC622_RS04785 PF00175 Oxidoreductase NAD-binding domain JC622_RS04790 PF02508 Rnf-Nqr subunit, membrane protein JC622_RS04795 PF02508 Rnf-Nqr subunit, membrane protein JC622_RS04800 PF04205 FMN-binding domain JC622_RS04805 PF03116 NQR2, RnfD, RnfE family JC622_RS04810 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) JC622_RS04810 PF11973 NQRA C-terminal domain JC622_RS04815 PF01722 BolA-like protein JC622_RS04820 PF05175 Methyltransferase small domain JC622_RS04830 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JC622_RS04835 PF07690 Major Facilitator Superfamily JC622_RS04840 PF03502 Nucleoside-specific channel-forming protein, Tsx JC622_RS04845 PF04461 Protein of unknown function (DUF520) JC622_RS04850 PF02558 Ketopantoate reductase PanE/ApbA JC622_RS04850 PF08546 Ketopantoate reductase PanE/ApbA C terminal JC622_RS04855 PF01965 DJ-1/PfpI family JC622_RS04865 PF11798 IMS family HHH motif JC622_RS04865 PF00817 impB/mucB/samB family JC622_RS04865 PF11799 impB/mucB/samB family C-terminal domain JC622_RS04870 PF00672 HAMP domain JC622_RS04870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS04875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS04875 PF03466 LysR substrate binding domain JC622_RS04885 PF04241 Protein of unknown function (DUF423) JC622_RS04890 PF01728 FtsJ-like methyltransferase JC622_RS04890 PF18125 RlmM ferredoxin-like domain JC622_RS04900 PF00180 Isocitrate/isopropylmalate dehydrogenase JC622_RS04900 PF18324 Hypothetical protein TT1725 JC622_RS04905 PF01367 5'-3' exonuclease, C-terminal SAM fold JC622_RS04905 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JC622_RS04910 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JC622_RS04910 PF03641 Possible lysine decarboxylase JC622_RS04910 PF11892 Domain of unknown function (DUF3412) JC622_RS04915 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS04925 PF14489 QueF-like protein JC622_RS04925 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JC622_RS04930 PF07348 Syd protein (SUKH-2) JC622_RS04935 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) JC622_RS04960 PF04287 tRNA pseudouridine synthase C JC622_RS04965 PF00849 RNA pseudouridylate synthase JC622_RS04970 PF00258 Flavodoxin JC622_RS04980 PF07148 Maltose operon periplasmic protein precursor (MalM) JC622_RS05000 PF11944 Protein of unknown function (DUF3461) JC622_RS05005 PF00132 Bacterial transferase hexapeptide (six repeats) JC622_RS05005 PF14602 Hexapeptide repeat of succinyl-transferase JC622_RS05005 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JC622_RS05010 PF01842 ACT domain JC622_RS05010 PF01909 Nucleotidyltransferase domain JC622_RS05010 PF01966 HD domain JC622_RS05010 PF08335 GlnD PII-uridylyltransferase JC622_RS05015 PF00557 Metallopeptidase family M24 JC622_RS05020 PF00318 Ribosomal protein S2 JC622_RS05025 PF00889 Elongation factor TS JC622_RS05030 PF00696 Amino acid kinase family JC622_RS05035 PF01765 Ribosome recycling factor JC622_RS05040 PF01255 Putative undecaprenyl diphosphate synthase JC622_RS05050 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JC622_RS05050 PF13288 DXP reductoisomerase C-terminal domain JC622_RS05050 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JC622_RS05055 PF02163 Peptidase family M50 JC622_RS05055 PF17820 PDZ domain JC622_RS05060 PF07244 Surface antigen variable number repeat JC622_RS05060 PF01103 Surface antigen JC622_RS05065 PF03938 Outer membrane protein (OmpH-like) JC622_RS05070 PF00132 Bacterial transferase hexapeptide (six repeats) JC622_RS05070 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JC622_RS05075 PF07977 FabA-like domain JC622_RS05080 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JC622_RS05080 PF00132 Bacterial transferase hexapeptide (six repeats) JC622_RS05085 PF02684 Lipid-A-disaccharide synthetase JC622_RS05090 PF01351 Ribonuclease HII JC622_RS05095 PF01336 OB-fold nucleic acid binding domain JC622_RS05095 PF07733 Bacterial DNA polymerase III alpha NTPase domain JC622_RS05095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JC622_RS05095 PF14579 Helix-hairpin-helix motif JC622_RS05095 PF02811 PHP domain JC622_RS05100 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JC622_RS05110 PF00923 Transaldolase/Fructose-6-phosphate aldolase JC622_RS05115 PF01235 Sodium:alanine symporter family JC622_RS05120 PF01841 Transglutaminase-like superfamily JC622_RS05120 PF11992 Domain of unknown function (DUF3488) JC622_RS05120 PF13559 Domain of unknown function (DUF4129) JC622_RS05130 PF07726 ATPase family associated with various cellular activities (AAA) JC622_RS05130 PF17863 AAA lid domain JC622_RS05135 PF07690 Major Facilitator Superfamily JC622_RS05145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS05145 PF03466 LysR substrate binding domain JC622_RS05150 PF00854 POT family JC622_RS05155 PF03652 Holliday junction resolvase JC622_RS05160 PF02622 Uncharacterized ACR, COG1678 JC622_RS05165 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JC622_RS05165 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JC622_RS05170 PF04452 RNA methyltransferase JC622_RS05175 PF04231 Endonuclease I JC622_RS05180 PF17283 SprT-like zinc ribbon domain JC622_RS05180 PF10263 SprT-like family JC622_RS05185 PF02773 S-adenosylmethionine synthetase, C-terminal domain JC622_RS05185 PF02772 S-adenosylmethionine synthetase, central domain JC622_RS05185 PF00438 S-adenosylmethionine synthetase, N-terminal domain JC622_RS05190 PF02780 Transketolase, C-terminal domain JC622_RS05190 PF02779 Transketolase, pyrimidine binding domain JC622_RS05190 PF00456 Transketolase, thiamine diphosphate binding domain JC622_RS05225 PF03702 Anhydro-N-acetylmuramic acid kinase JC622_RS05230 PF01551 Peptidase family M23 JC622_RS05230 PF08525 Opacity-associated protein A N-terminal motif JC622_RS05230 PF01476 LysM domain JC622_RS05235 PF00579 tRNA synthetases class I (W and Y) JC622_RS05240 PF03466 LysR substrate binding domain JC622_RS05240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS05245 PF03306 Alpha-acetolactate decarboxylase JC622_RS05250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC622_RS05250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JC622_RS05250 PF00205 Thiamine pyrophosphate enzyme, central domain JC622_RS05260 PF03466 LysR substrate binding domain JC622_RS05260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS05275 PF12706 Beta-lactamase superfamily domain JC622_RS05285 PF13520 Amino acid permease JC622_RS05290 PF13302 Acetyltransferase (GNAT) domain JC622_RS05295 PF12848 ABC transporter JC622_RS05295 PF16326 ABC transporter C-terminal domain JC622_RS05295 PF00005 ABC transporter JC622_RS05300 PF00486 Transcriptional regulatory protein, C terminal JC622_RS05300 PF18500 CadC C-terminal domain 1 JC622_RS05310 PF13520 Amino acid permease JC622_RS05315 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JC622_RS05315 PF01276 Orn/Lys/Arg decarboxylase, major domain JC622_RS05315 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JC622_RS05320 PF08543 Phosphomethylpyrimidine kinase JC622_RS05330 PF05649 Peptidase family M13 JC622_RS05330 PF01431 Peptidase family M13 JC622_RS05335 PF11734 TilS substrate C-terminal domain JC622_RS05335 PF09179 TilS substrate binding domain JC622_RS05335 PF01171 PP-loop family JC622_RS05340 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS05345 PF02080 TrkA-C domain JC622_RS05345 PF00999 Sodium/hydrogen exchanger family JC622_RS05345 PF02254 TrkA-N domain JC622_RS05365 PF00196 Bacterial regulatory proteins, luxR family JC622_RS05365 PF00072 Response regulator receiver domain JC622_RS05375 PF00128 Alpha amylase, catalytic domain JC622_RS05390 PF00535 Glycosyl transferase family 2 JC622_RS05405 PF03734 L,D-transpeptidase catalytic domain JC622_RS05405 PF01471 Putative peptidoglycan binding domain JC622_RS05410 PF05951 Bacterial protein of unknown function (DUF882) JC622_RS05420 PF03458 UPF0126 domain JC622_RS05430 PF02463 RecF/RecN/SMC N terminal domain JC622_RS05430 PF06470 SMC proteins Flexible Hinge Domain JC622_RS05435 PF04354 ZipA, C-terminal FtsZ-binding domain JC622_RS05440 PF01653 NAD-dependent DNA ligase adenylation domain JC622_RS05440 PF03120 NAD-dependent DNA ligase OB-fold domain JC622_RS05440 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JC622_RS05440 PF12826 Helix-hairpin-helix motif JC622_RS05440 PF00533 BRCA1 C Terminus (BRCT) domain JC622_RS05450 PF13597 Anaerobic ribonucleoside-triphosphate reductase JC622_RS05450 PF03477 ATP cone domain JC622_RS05460 PF01679 Proteolipid membrane potential modulator JC622_RS05485 PF00529 HlyD membrane-fusion protein of T1SS JC622_RS05485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JC622_RS05490 PF01047 MarR family JC622_RS05505 PF03390 2-hydroxycarboxylate transporter family JC622_RS05510 PF00390 Malic enzyme, N-terminal domain JC622_RS05510 PF03949 Malic enzyme, NAD binding domain JC622_RS05515 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JC622_RS05515 PF00989 PAS fold JC622_RS05515 PF17203 Single cache domain 3 JC622_RS05515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS05520 PF00072 Response regulator receiver domain JC622_RS05520 PF12431 Transcriptional regulator JC622_RS05525 PF00892 EamA-like transporter family JC622_RS05535 PF00171 Aldehyde dehydrogenase family JC622_RS05540 PF01590 GAF domain JC622_RS05540 PF02954 Bacterial regulatory protein, Fis family JC622_RS05540 PF00158 Sigma-54 interaction domain JC622_RS05545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC622_RS05550 PF00072 Response regulator receiver domain JC622_RS05550 PF00486 Transcriptional regulatory protein, C terminal JC622_RS05555 PF00989 PAS fold JC622_RS05555 PF11808 Phosphate regulon sensor protein PhoR JC622_RS05555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS05555 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS05560 PF12849 PBP superfamily domain JC622_RS05565 PF01435 Peptidase family M48 JC622_RS05575 PF00480 ROK family JC622_RS05580 PF03932 CutC family JC622_RS05585 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JC622_RS05585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JC622_RS05600 PF00293 NUDIX domain JC622_RS05610 PF08534 Redoxin JC622_RS05615 PF01699 Sodium/calcium exchanger protein JC622_RS05620 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JC622_RS05620 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JC622_RS05625 PF01235 Sodium:alanine symporter family JC622_RS05635 PF00860 Permease family JC622_RS05640 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS05645 PF10692 Protein of unknown function (DUF2498) JC622_RS05650 PF01554 MatE JC622_RS05655 PF12833 Helix-turn-helix domain JC622_RS05660 PF00390 Malic enzyme, N-terminal domain JC622_RS05660 PF03949 Malic enzyme, NAD binding domain JC622_RS05665 PF01389 OmpA-like transmembrane domain JC622_RS05665 PF00691 OmpA family JC622_RS05670 PF01389 OmpA-like transmembrane domain JC622_RS05670 PF00691 OmpA family JC622_RS05675 PF00691 OmpA family JC622_RS05675 PF01389 OmpA-like transmembrane domain JC622_RS05690 PF13520 Amino acid permease JC622_RS05695 PF01734 Patatin-like phospholipase JC622_RS05700 PF17158 Membrane-associated sensor, integral membrane domain JC622_RS05700 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS05705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JC622_RS05705 PF00529 HlyD membrane-fusion protein of T1SS JC622_RS05710 PF00873 AcrB/AcrD/AcrF family JC622_RS05715 PF08497 Radical SAM N-terminal JC622_RS05715 PF11842 Domain of unknown function (DUF3362) JC622_RS05715 PF04055 Radical SAM superfamily JC622_RS05745 PF03466 LysR substrate binding domain JC622_RS05745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS05750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JC622_RS05755 PF04358 DsrC like protein JC622_RS05760 PF12805 FUSC-like inner membrane protein yccS JC622_RS05765 PF01027 Inhibitor of apoptosis-promoting Bax1 JC622_RS05775 PF03695 Uncharacterised protein family (UPF0149) JC622_RS05775 PF02810 SEC-C motif JC622_RS05780 PF18766 SWI2/SNF2 ATPase JC622_RS05780 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JC622_RS05780 PF12008 Type I restriction and modification enzyme - subunit R C terminal JC622_RS05790 PF01420 Type I restriction modification DNA specificity domain JC622_RS05795 PF02384 N-6 DNA Methylase JC622_RS05795 PF12161 HsdM N-terminal domain JC622_RS05800 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A JC622_RS05850 PF04002 RadC-like JAB domain JC622_RS05885 PF00239 Resolvase, N terminal domain JC622_RS05885 PF02796 Helix-turn-helix domain of resolvase JC622_RS05905 PF13148 Protein of unknown function (DUF3987) JC622_RS05920 PF00816 H-NS histone family JC622_RS05925 PF00005 ABC transporter JC622_RS05925 PF03459 TOBE domain JC622_RS05930 PF00589 Phage integrase family JC622_RS05930 PF13356 Arm DNA-binding domain JC622_RS05935 PF04794 YdjC-like protein JC622_RS05940 PF02056 Family 4 glycosyl hydrolase JC622_RS05940 PF11975 Family 4 glycosyl hydrolase C-terminal domain JC622_RS05945 PF07883 Cupin domain JC622_RS05945 PF12833 Helix-turn-helix domain JC622_RS05950 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JC622_RS05955 PF00232 Glycosyl hydrolase family 1 JC622_RS05960 PF02378 Phosphotransferase system, EIIC JC622_RS05965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC622_RS05970 PF01203 Type II secretion system (T2SS), protein N JC622_RS05975 PF04612 Type II secretion system (T2SS), protein M JC622_RS05980 PF05134 Type II secretion system (T2SS), protein L JC622_RS05980 PF12693 GspL periplasmic domain JC622_RS05985 PF03934 Type II secretion system (T2SS), protein K JC622_RS05995 PF02501 Type II secretion system (T2SS), protein I JC622_RS05995 PF07963 Prokaryotic N-terminal methylation motif JC622_RS06000 PF12019 Type II transport protein GspH JC622_RS06000 PF07963 Prokaryotic N-terminal methylation motif JC622_RS06005 PF08334 Type II secretion system (T2SS), protein G JC622_RS06005 PF07963 Prokaryotic N-terminal methylation motif JC622_RS06010 PF00482 Type II secretion system (T2SS), protein F JC622_RS06015 PF00437 Type II/IV secretion system protein JC622_RS06020 PF03958 Bacterial type II/III secretion system short domain JC622_RS06020 PF00263 Bacterial type II and III secretion system protein JC622_RS06025 PF11356 Type II secretion system protein C JC622_RS06030 PF16537 Type II secretion system protein B JC622_RS06035 PF13401 AAA domain JC622_RS06035 PF01471 Putative peptidoglycan binding domain JC622_RS06040 PF00672 HAMP domain JC622_RS06040 PF01966 HD domain JC622_RS06045 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JC622_RS06045 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JC622_RS06055 PF00004 ATPase family associated with various cellular activities (AAA) JC622_RS06055 PF17862 AAA+ lid domain JC622_RS06055 PF01434 Peptidase family M41 JC622_RS06060 PF00291 Pyridoxal-phosphate dependent enzyme JC622_RS06065 PF00381 PTS HPr component phosphorylation site JC622_RS06070 PF00391 PEP-utilising enzyme, mobile domain JC622_RS06070 PF02896 PEP-utilising enzyme, TIM barrel domain JC622_RS06070 PF05524 PEP-utilising enzyme, N-terminal JC622_RS06075 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JC622_RS06080 PF08448 PAS fold JC622_RS06080 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS06085 PF05649 Peptidase family M13 JC622_RS06085 PF01431 Peptidase family M13 JC622_RS06095 PF12795 Mechanosensitive ion channel porin domain JC622_RS06095 PF00924 Mechanosensitive ion channel JC622_RS06095 PF12794 Mechanosensitive ion channel inner membrane domain 1 JC622_RS06100 PF00224 Pyruvate kinase, barrel domain JC622_RS06100 PF02887 Pyruvate kinase, alpha/beta domain JC622_RS06110 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JC622_RS06115 PF13476 AAA domain JC622_RS06120 PF00149 Calcineurin-like phosphoesterase JC622_RS06120 PF12320 Type 5 capsule protein repressor C-terminal domain JC622_RS06130 PF04381 Putative exonuclease, RdgC JC622_RS06140 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JC622_RS06140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JC622_RS06145 PF02690 Na+/Pi-cotransporter JC622_RS06155 PF00324 Amino acid permease JC622_RS06165 PF00324 Amino acid permease JC622_RS06170 PF00202 Aminotransferase class-III JC622_RS06175 PF00171 Aldehyde dehydrogenase family JC622_RS06180 PF01381 Helix-turn-helix JC622_RS06180 PF07883 Cupin domain JC622_RS06185 PF01266 FAD dependent oxidoreductase JC622_RS06200 PF03350 Uncharacterized protein family, UPF0114 JC622_RS06205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS06210 PF00072 Response regulator receiver domain JC622_RS06210 PF00486 Transcriptional regulatory protein, C terminal JC622_RS06220 PF01292 Prokaryotic cytochrome b561 JC622_RS06225 PF01980 tRNA-methyltransferase O JC622_RS06225 PF18389 TrmO C-terminal domain JC622_RS06245 PF00005 ABC transporter JC622_RS06245 PF00664 ABC transporter transmembrane region JC622_RS06250 PF00005 ABC transporter JC622_RS06250 PF00664 ABC transporter transmembrane region JC622_RS06265 PF00072 Response regulator receiver domain JC622_RS06265 PF00486 Transcriptional regulatory protein, C terminal JC622_RS06275 PF03737 Aldolase/RraA JC622_RS06295 PF06953 Arsenical resistance operon trans-acting repressor ArsD JC622_RS06300 PF02374 Anion-transporting ATPase JC622_RS06305 PF01758 Sodium Bile acid symporter family JC622_RS06310 PF03960 ArsC family JC622_RS06315 PF07670 Nucleoside recognition JC622_RS06315 PF01773 Na+ dependent nucleoside transporter N-terminus JC622_RS06315 PF07662 Na+ dependent nucleoside transporter C-terminus JC622_RS06335 PF00872 Transposase, Mutator family JC622_RS06340 PF04307 LexA-binding, inner membrane-associated putative hydrolase JC622_RS06350 PF00290 Tryptophan synthase alpha chain JC622_RS06355 PF00291 Pyridoxal-phosphate dependent enzyme JC622_RS06360 PF00218 Indole-3-glycerol phosphate synthase JC622_RS06360 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JC622_RS06365 PF00591 Glycosyl transferase family, a/b domain JC622_RS06365 PF02885 Glycosyl transferase family, helical bundle domain JC622_RS06370 PF00117 Glutamine amidotransferase class-I JC622_RS06370 PF00591 Glycosyl transferase family, a/b domain JC622_RS06370 PF02885 Glycosyl transferase family, helical bundle domain JC622_RS06375 PF04715 Anthranilate synthase component I, N terminal region JC622_RS06375 PF00425 chorismate binding enzyme JC622_RS06380 PF02811 PHP domain JC622_RS06385 PF01300 Telomere recombination JC622_RS06390 PF02616 Segregation and condensation protein ScpA JC622_RS06395 PF04079 Segregation and condensation complex subunit ScpB JC622_RS06400 PF01479 S4 domain JC622_RS06400 PF00849 RNA pseudouridylate synthase JC622_RS06410 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) JC622_RS06415 PF00588 SpoU rRNA Methylase family JC622_RS06420 PF00742 Homoserine dehydrogenase JC622_RS06420 PF00696 Amino acid kinase family JC622_RS06420 PF01842 ACT domain JC622_RS06420 PF13840 ACT domain JC622_RS06420 PF03447 Homoserine dehydrogenase, NAD binding domain JC622_RS06425 PF08544 GHMP kinases C terminal JC622_RS06425 PF00288 GHMP kinases N terminal domain JC622_RS06430 PF14821 Threonine synthase N terminus JC622_RS06430 PF00291 Pyridoxal-phosphate dependent enzyme JC622_RS06445 PF13411 MerR HTH family regulatory protein JC622_RS06450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JC622_RS06450 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS06460 PF03496 ADP-ribosyltransferase exoenzyme JC622_RS06465 PF01312 FlhB HrpN YscU SpaS Family JC622_RS06470 PF01311 Bacterial export proteins, family 1 JC622_RS06475 PF01313 Bacterial export proteins, family 3 JC622_RS06480 PF00813 FliP family JC622_RS06485 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JC622_RS06500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JC622_RS06500 PF02874 ATP synthase alpha/beta family, beta-barrel domain JC622_RS06500 PF18269 T3SS EscN ATPase C-terminal domain JC622_RS06505 PF07201 HrpJ-like domain JC622_RS06510 PF09059 TyeA JC622_RS06520 PF09474 Type III secretion system YscX (type_III_YscX) JC622_RS06530 PF00771 FHIPEP family JC622_RS06535 PF09621 Type III secretion system regulator (LcrR) JC622_RS06540 PF07216 LcrG protein JC622_RS06545 PF04792 V antigen (LcrV) protein JC622_RS06550 PF07720 Tetratricopeptide repeat JC622_RS06555 PF04888 Secretion system effector C (SseC) like family JC622_RS06560 PF05844 YopD protein JC622_RS06565 PF00872 Transposase, Mutator family JC622_RS06575 PF05932 Tir chaperone protein (CesT) family JC622_RS06585 PF09619 Type III secretion system lipoprotein chaperone (YscW) JC622_RS06590 PF12833 Helix-turn-helix domain JC622_RS06595 PF16806 Antiactivator protein ExsD JC622_RS06600 PF05932 Tir chaperone protein (CesT) family JC622_RS06605 PF00263 Bacterial type II and III secretion system protein JC622_RS06605 PF03958 Bacterial type II/III secretion system short domain JC622_RS06610 PF16693 Inner membrane component of T3SS, periplasmic domain JC622_RS06610 PF16697 Inner membrane component of T3SS, cytoplasmic domain JC622_RS06620 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF JC622_RS06625 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) JC622_RS06630 PF09025 YopR, type III needle-polymerisation regulator JC622_RS06635 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI JC622_RS06640 PF01514 Secretory protein of YscJ/FliF family JC622_RS06645 PF06578 YOP proteins translocation protein K (YscK) JC622_RS06650 PF02108 Flagellar assembly protein FliH JC622_RS06655 PF02075 Crossover junction endodeoxyribonuclease RuvC JC622_RS06665 PF00873 AcrB/AcrD/AcrF family JC622_RS06670 PF09317 Domain of unknown function (DUF1974) JC622_RS06670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC622_RS06670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC622_RS06670 PF02770 Acyl-CoA dehydrogenase, middle domain JC622_RS06675 PF00440 Bacterial regulatory proteins, tetR family JC622_RS06690 PF00480 ROK family JC622_RS06695 PF17128 Domain of unknown function (DUF5107) JC622_RS06695 PF13181 Tetratricopeptide repeat JC622_RS06700 PF00083 Sugar (and other) transporter JC622_RS06710 PF00455 DeoR C terminal sensor domain JC622_RS06710 PF08220 DeoR-like helix-turn-helix domain JC622_RS06715 PF08013 Tagatose 6 phosphate kinase JC622_RS06720 PF01380 SIS domain JC622_RS06725 PF03610 PTS system fructose IIA component JC622_RS06730 PF01979 Amidohydrolase family JC622_RS06735 PF01116 Fructose-bisphosphate aldolase class-II JC622_RS06740 PF03830 PTS system sorbose subfamily IIB component JC622_RS06745 PF03609 PTS system sorbose-specific iic component JC622_RS06750 PF03613 PTS system mannose/fructose/sorbose family IID component JC622_RS06755 PF13580 SIS domain JC622_RS06760 PF13580 SIS domain JC622_RS06770 PF12838 4Fe-4S dicluster domain JC622_RS06770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JC622_RS06770 PF01568 Molydopterin dinucleotide binding domain JC622_RS06770 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JC622_RS06770 PF00384 Molybdopterin oxidoreductase JC622_RS06775 PF03707 Bacterial signalling protein N terminal repeat JC622_RS06775 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS06775 PF00563 EAL domain JC622_RS06780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS06780 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS06780 PF09456 RcsC Alpha-Beta-Loop (ABL) JC622_RS06780 PF00072 Response regulator receiver domain JC622_RS06785 PF02899 Phage integrase, N-terminal SAM-like domain JC622_RS06785 PF00589 Phage integrase family JC622_RS06820 PF04381 Putative exonuclease, RdgC JC622_RS06855 PF12684 PDDEXK-like domain of unknown function (DUF3799) JC622_RS06855 PF06630 Enterobacterial exodeoxyribonuclease VIII JC622_RS06915 PF01555 DNA methylase JC622_RS06945 PF05772 NinB protein JC622_RS06955 PF00149 Calcineurin-like phosphoesterase JC622_RS07015 PF10549 ORF11CD3 domain JC622_RS07015 PF09669 Phage regulatory protein Rha (Phage_pRha) JC622_RS07100 PF08346 AntA/AntB antirepressor JC622_RS07100 PF10548 P22AR C-terminal domain JC622_RS07140 PF03869 Arc-like DNA binding domain JC622_RS07165 PF01668 SmpB protein JC622_RS07170 PF03364 Polyketide cyclase / dehydrase and lipid transport JC622_RS07175 PF03658 RnfH family Ubiquitin JC622_RS07180 PF07687 Peptidase dimerisation domain JC622_RS07180 PF01546 Peptidase family M20/M25/M40 JC622_RS07185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC622_RS07185 PF02770 Acyl-CoA dehydrogenase, middle domain JC622_RS07185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC622_RS07185 PF09317 Domain of unknown function (DUF1974) JC622_RS07190 PF13580 SIS domain JC622_RS07195 PF13230 Glutamine amidotransferases class-II JC622_RS07205 PF01933 Uncharacterised protein family UPF0052 JC622_RS07215 PF00072 Response regulator receiver domain JC622_RS07215 PF09456 RcsC Alpha-Beta-Loop (ABL) JC622_RS07215 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS07215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS07225 PF00196 Bacterial regulatory proteins, luxR family JC622_RS07225 PF00072 Response regulator receiver domain JC622_RS07230 PF00672 HAMP domain JC622_RS07230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS07230 PF07730 Histidine kinase JC622_RS07230 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JC622_RS07235 PF06463 Molybdenum Cofactor Synthesis C JC622_RS07235 PF04055 Radical SAM superfamily JC622_RS07240 PF12838 4Fe-4S dicluster domain JC622_RS07240 PF13187 4Fe-4S dicluster domain JC622_RS07250 PF10518 TAT (twin-arginine translocation) pathway signal sequence JC622_RS07250 PF00384 Molybdopterin oxidoreductase JC622_RS07250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JC622_RS07250 PF01568 Molydopterin dinucleotide binding domain JC622_RS07255 PF12800 4Fe-4S binding domain JC622_RS07255 PF12838 4Fe-4S dicluster domain JC622_RS07260 PF12801 4Fe-4S binding domain JC622_RS07260 PF12837 4Fe-4S binding domain JC622_RS07265 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) JC622_RS07270 PF03264 NapC/NirT cytochrome c family, N-terminal region JC622_RS07275 PF00994 Probable molybdopterin binding domain JC622_RS07280 PF01967 MoaC family JC622_RS07285 PF02597 ThiS family JC622_RS07290 PF02391 MoaE protein JC622_RS07300 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS07305 PF00005 ABC transporter JC622_RS07305 PF03459 TOBE domain JC622_RS07310 PF12697 Alpha/beta hydrolase family JC622_RS07315 PF00899 ThiF family JC622_RS07320 PF00994 Probable molybdopterin binding domain JC622_RS07320 PF03454 MoeA C-terminal region (domain IV) JC622_RS07320 PF03453 MoeA N-terminal region (domain I and II) JC622_RS07325 PF01227 GTP cyclohydrolase I JC622_RS07330 PF00672 HAMP domain JC622_RS07330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS07330 PF17200 Single Cache domain 2 JC622_RS07335 PF01268 Formate--tetrahydrofolate ligase JC622_RS07345 PF03466 LysR substrate binding domain JC622_RS07345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS07350 PF04264 YceI-like domain JC622_RS07360 PF05221 S-adenosyl-L-homocysteine hydrolase JC622_RS07360 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JC622_RS07375 PF07687 Peptidase dimerisation domain JC622_RS07375 PF01546 Peptidase family M20/M25/M40 JC622_RS07380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JC622_RS07380 PF17944 Arginine decarboxylase C-terminal helical extension JC622_RS07380 PF17810 Arginine decarboxylase helical bundle domain JC622_RS07390 PF00753 Metallo-beta-lactamase superfamily JC622_RS07390 PF14863 Alkyl sulfatase dimerisation JC622_RS07390 PF14864 Alkyl sulfatase C-terminal JC622_RS07405 PF12729 Four helix bundle sensory module for signal transduction JC622_RS07405 PF00672 HAMP domain JC622_RS07405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS07415 PF01042 Endoribonuclease L-PSP JC622_RS07420 PF03313 Serine dehydratase alpha chain JC622_RS07425 PF08348 YheO-like PAS domain JC622_RS07425 PF13309 HTH domain JC622_RS07430 PF00300 Histidine phosphatase superfamily (branch 1) JC622_RS07435 PF12729 Four helix bundle sensory module for signal transduction JC622_RS07435 PF00672 HAMP domain JC622_RS07435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS07440 PF07055 Enoyl reductase FAD binding domain JC622_RS07440 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JC622_RS07440 PF12241 Trans-2-enoyl-CoA reductase catalytic region JC622_RS07445 PF03606 C4-dicarboxylate anaerobic carrier JC622_RS07450 PF00155 Aminotransferase class I and II JC622_RS07460 PF00230 Major intrinsic protein JC622_RS07465 PF01551 Peptidase family M23 JC622_RS07465 PF10145 Phage-related minor tail protein JC622_RS07465 PF01464 Transglycosylase SLT domain JC622_RS07480 PF13396 Phospholipase_D-nuclease N-terminal JC622_RS07480 PF13091 PLD-like domain JC622_RS07490 PF01842 ACT domain JC622_RS07490 PF00551 Formyl transferase JC622_RS07495 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JC622_RS07505 PF00085 Thioredoxin JC622_RS07510 PF01648 4'-phosphopantetheinyl transferase superfamily JC622_RS07515 PF00877 NlpC/P60 family JC622_RS07520 PF05971 RNA methyltransferase JC622_RS07525 PF01575 MaoC like domain JC622_RS07530 PF00939 Sodium:sulfate symporter transmembrane region JC622_RS07540 PF17969 L,D-transpeptidase C-terminal domain JC622_RS07540 PF01476 LysM domain JC622_RS07540 PF03734 L,D-transpeptidase catalytic domain JC622_RS07550 PF00873 AcrB/AcrD/AcrF family JC622_RS07555 PF00529 HlyD membrane-fusion protein of T1SS JC622_RS07555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JC622_RS07560 PF00072 Response regulator receiver domain JC622_RS07560 PF00486 Transcriptional regulatory protein, C terminal JC622_RS07565 PF00672 HAMP domain JC622_RS07565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS07565 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS07570 PF00271 Helicase conserved C-terminal domain JC622_RS07570 PF00176 SNF2 family N-terminal domain JC622_RS07570 PF04434 SWIM zinc finger JC622_RS07575 PF05472 DNA replication terminus site-binding protein (Ter protein) JC622_RS07585 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JC622_RS07590 PF01476 LysM domain JC622_RS07590 PF01464 Transglycosylase SLT domain JC622_RS07595 PF16123 Hydroxyacylglutathione hydrolase C-terminus JC622_RS07595 PF00753 Metallo-beta-lactamase superfamily JC622_RS07600 PF08241 Methyltransferase domain JC622_RS07605 PF00075 RNase H JC622_RS07610 PF00929 Exonuclease JC622_RS07625 PF13808 DDE_Tnp_1-associated JC622_RS07625 PF01609 Transposase DDE domain JC622_RS07635 PF04954 Siderophore-interacting protein JC622_RS07635 PF08021 Siderophore-interacting FAD-binding domain JC622_RS07640 PF01032 FecCD transport family JC622_RS07645 PF01032 FecCD transport family JC622_RS07650 PF00005 ABC transporter JC622_RS07655 PF01497 Periplasmic binding protein JC622_RS07665 PF00873 AcrB/AcrD/AcrF family JC622_RS07670 PF00529 HlyD membrane-fusion protein of T1SS JC622_RS07670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JC622_RS07685 PF00873 AcrB/AcrD/AcrF family JC622_RS07690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JC622_RS07695 PF03372 Endonuclease/Exonuclease/phosphatase family JC622_RS07710 PF02424 ApbE family JC622_RS07715 PF00127 Copper binding proteins, plastocyanin/azurin family JC622_RS07725 PF04337 Protein of unknown function, DUF480 JC622_RS07730 PF13188 PAS domain JC622_RS07730 PF03707 Bacterial signalling protein N terminal repeat JC622_RS07730 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS07730 PF00563 EAL domain JC622_RS07740 PF04325 Protein of unknown function (DUF465) JC622_RS07750 PF01554 MatE JC622_RS07770 PF00465 Iron-containing alcohol dehydrogenase JC622_RS07780 PF00440 Bacterial regulatory proteins, tetR family JC622_RS07780 PF08359 YsiA-like protein, C-terminal region JC622_RS07785 PF00171 Aldehyde dehydrogenase family JC622_RS07795 PF01156 Inosine-uridine preferring nucleoside hydrolase JC622_RS07805 PF00034 Cytochrome c JC622_RS07805 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JC622_RS07815 PF05656 Protein of unknown function (DUF805) JC622_RS07835 PF07971 Glycosyl hydrolase family 92 JC622_RS07835 PF17678 Glycosyl hydrolase family 92 N-terminal domain JC622_RS07850 PF07971 Glycosyl hydrolase family 92 JC622_RS07850 PF17678 Glycosyl hydrolase family 92 N-terminal domain JC622_RS07855 PF01238 Phosphomannose isomerase type I JC622_RS07860 PF12833 Helix-turn-helix domain JC622_RS07865 PF00180 Isocitrate/isopropylmalate dehydrogenase JC622_RS07875 PF00291 Pyridoxal-phosphate dependent enzyme JC622_RS07880 PF02447 GntP family permease JC622_RS07885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS07885 PF03466 LysR substrate binding domain JC622_RS07895 PF00877 NlpC/P60 family JC622_RS07900 PF03466 LysR substrate binding domain JC622_RS07900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS07905 PF00578 AhpC/TSA family JC622_RS07905 PF10417 C-terminal domain of 1-Cys peroxiredoxin JC622_RS07925 PF08003 Protein of unknown function (DUF1698) JC622_RS07930 PF13649 Methyltransferase domain JC622_RS07935 PF01904 Protein of unknown function DUF72 JC622_RS07945 PF00152 tRNA synthetases class II (D, K and N) JC622_RS07945 PF01336 OB-fold nucleic acid binding domain JC622_RS07945 PF02938 GAD domain JC622_RS07950 PF01709 Transcriptional regulator JC622_RS07955 PF00171 Aldehyde dehydrogenase family JC622_RS07955 PF00465 Iron-containing alcohol dehydrogenase JC622_RS07960 PF01914 MarC family integral membrane protein JC622_RS07965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC622_RS07970 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS07975 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS07975 PF12911 N-terminal TM domain of oligopeptide transport permease C JC622_RS07980 PF00005 ABC transporter JC622_RS07980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC622_RS07985 PF00005 ABC transporter JC622_RS07985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC622_RS07990 PF03741 Integral membrane protein TerC family JC622_RS07995 PF00842 Alanine racemase, C-terminal domain JC622_RS07995 PF01168 Alanine racemase, N-terminal domain JC622_RS08000 PF04191 Phospholipid methyltransferase JC622_RS08005 PF00437 Type II/IV secretion system protein JC622_RS08020 PF01032 FecCD transport family JC622_RS08025 PF00005 ABC transporter JC622_RS08030 PF00793 DAHP synthetase I family JC622_RS08035 PF01219 Prokaryotic diacylglycerol kinase JC622_RS08040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JC622_RS08040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JC622_RS08040 PF01842 ACT domain JC622_RS08045 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JC622_RS08050 PF01812 5-formyltetrahydrofolate cyclo-ligase family JC622_RS08065 PF05173 Dihydrodipicolinate reductase, C-terminus JC622_RS08065 PF01113 Dihydrodipicolinate reductase, N-terminus JC622_RS08075 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JC622_RS08075 PF00117 Glutamine amidotransferase class-I JC622_RS08080 PF02142 MGS-like domain JC622_RS08080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JC622_RS08080 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JC622_RS08085 PF07759 Protein of unknown function (DUF1615) JC622_RS08090 PF02153 Prephenate dehydrogenase JC622_RS08090 PF01817 Chorismate mutase type II JC622_RS08095 PF00793 DAHP synthetase I family JC622_RS08100 PF00483 Nucleotidyl transferase JC622_RS08105 PF07549 SecD/SecF GG Motif JC622_RS08105 PF02355 Protein export membrane protein JC622_RS08110 PF07549 SecD/SecF GG Motif JC622_RS08110 PF13721 SecD export protein N-terminal TM region JC622_RS08110 PF02355 Protein export membrane protein JC622_RS08145 PF01230 HIT domain JC622_RS08150 PF00672 HAMP domain JC622_RS08150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS08160 PF01979 Amidohydrolase family JC622_RS08175 PF00375 Sodium:dicarboxylate symporter family JC622_RS08180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS08180 PF00672 HAMP domain JC622_RS08190 PF05661 Protein of unknown function (DUF808) JC622_RS08195 PF01432 Peptidase family M3 JC622_RS08195 PF08439 Oligopeptidase F JC622_RS08200 PF00860 Permease family JC622_RS08205 PF05728 Uncharacterised protein family (UPF0227) JC622_RS08210 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS08220 PF04055 Radical SAM superfamily JC622_RS08225 PF00563 EAL domain JC622_RS08225 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS08225 PF03707 Bacterial signalling protein N terminal repeat JC622_RS08230 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS08230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JC622_RS08240 PF07678 A-macroglobulin TED domain JC622_RS08240 PF01835 MG2 domain JC622_RS08240 PF17962 Bacterial macroglobulin domain 6 JC622_RS08240 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain JC622_RS08240 PF11974 Bacterial alpha-2-macroglobulin MG3 domain JC622_RS08240 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain JC622_RS08240 PF00207 Alpha-2-macroglobulin family JC622_RS08240 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain JC622_RS08240 PF07703 Alpha-2-macroglobulin bait region domain JC622_RS08245 PF00905 Penicillin binding protein transpeptidase domain JC622_RS08245 PF00912 Transglycosylase JC622_RS08245 PF06832 Penicillin-Binding Protein C-terminus Family JC622_RS08255 PF02926 THUMP domain JC622_RS08255 PF02568 Thiamine biosynthesis protein (ThiI) JC622_RS08265 PF03458 UPF0126 domain JC622_RS08270 PF00669 Bacterial flagellin N-terminal helical region JC622_RS08270 PF07196 Flagellin hook IN motif JC622_RS08270 PF00700 Bacterial flagellin C-terminal helical region JC622_RS08280 PF00669 Bacterial flagellin N-terminal helical region JC622_RS08280 PF07196 Flagellin hook IN motif JC622_RS08280 PF00700 Bacterial flagellin C-terminal helical region JC622_RS08290 PF02465 Flagellar hook-associated protein 2 N-terminus JC622_RS08290 PF07196 Flagellin hook IN motif JC622_RS08290 PF07195 Flagellar hook-associated protein 2 C-terminus JC622_RS08295 PF02561 Flagellar protein FliS JC622_RS08315 PF03102 NeuB family JC622_RS08315 PF08666 SAF domain JC622_RS08325 PF00202 Aminotransferase class-III JC622_RS08330 PF02348 Cytidylyltransferase JC622_RS08340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JC622_RS08345 PF02719 Polysaccharide biosynthesis protein JC622_RS08350 PF01497 Periplasmic binding protein JC622_RS08360 PF01048 Phosphorylase superfamily JC622_RS08365 PF02535 ZIP Zinc transporter JC622_RS08370 PF00459 Inositol monophosphatase family JC622_RS08380 PF02798 Glutathione S-transferase, N-terminal domain JC622_RS08380 PF00043 Glutathione S-transferase, C-terminal domain JC622_RS08385 PF07690 Major Facilitator Superfamily JC622_RS08395 PF05164 Cell division protein ZapA JC622_RS08400 PF03695 Uncharacterised protein family (UPF0149) JC622_RS08405 PF01494 FAD binding domain JC622_RS08410 PF01494 FAD binding domain JC622_RS08420 PF01571 Aminomethyltransferase folate-binding domain JC622_RS08420 PF08669 Glycine cleavage T-protein C-terminal barrel domain JC622_RS08425 PF01597 Glycine cleavage H-protein JC622_RS08430 PF02347 Glycine cleavage system P-protein JC622_RS08435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS08435 PF08447 PAS fold JC622_RS08450 PF00324 Amino acid permease JC622_RS08460 PF03618 Kinase/pyrophosphorylase JC622_RS08465 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JC622_RS08465 PF00391 PEP-utilising enzyme, mobile domain JC622_RS08465 PF02896 PEP-utilising enzyme, TIM barrel domain JC622_RS08475 PF00082 Subtilase family JC622_RS08475 PF01483 Proprotein convertase P-domain JC622_RS08480 PF03180 NLPA lipoprotein JC622_RS08485 PF00884 Sulfatase JC622_RS08485 PF11893 Domain of unknown function (DUF3413) JC622_RS08490 PF07208 Protein of unknown function (DUF1414) JC622_RS08495 PF04245 37-kD nucleoid-associated bacterial protein JC622_RS08500 PF01547 Bacterial extracellular solute-binding protein JC622_RS08505 PF14785 Maltose transport system permease protein MalF P2 domain JC622_RS08505 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS08510 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS08515 PF00005 ABC transporter JC622_RS08515 PF08402 TOBE domain JC622_RS08520 PF03976 Polyphosphate kinase 2 (PPK2) JC622_RS08525 PF00561 alpha/beta hydrolase fold JC622_RS08535 PF01594 AI-2E family transporter JC622_RS08540 PF01206 Sulfurtransferase TusA JC622_RS08545 PF01435 Peptidase family M48 JC622_RS08545 PF07720 Tetratricopeptide repeat JC622_RS08550 PF00578 AhpC/TSA family JC622_RS08555 PF03960 ArsC family JC622_RS08565 PF04336 Acyl carrier protein phosphodiesterase JC622_RS08570 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC622_RS08575 PF01979 Amidohydrolase family JC622_RS08580 PF03956 Lysine exporter LysO JC622_RS08585 PF00005 ABC transporter JC622_RS08590 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC622_RS08595 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS08600 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS08605 PF01610 Transposase JC622_RS08605 PF13542 Helix-turn-helix domain of transposase family ISL3 JC622_RS08605 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 JC622_RS08610 PF00849 RNA pseudouridylate synthase JC622_RS08620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC622_RS08625 PF04209 homogentisate 1,2-dioxygenase JC622_RS08635 PF02798 Glutathione S-transferase, N-terminal domain JC622_RS08635 PF14497 Glutathione S-transferase, C-terminal domain JC622_RS08640 PF03577 Peptidase family C69 JC622_RS08645 PF01546 Peptidase family M20/M25/M40 JC622_RS08645 PF07687 Peptidase dimerisation domain JC622_RS08650 PF03606 C4-dicarboxylate anaerobic carrier JC622_RS08660 PF00733 Asparagine synthase JC622_RS08660 PF13537 Glutamine amidotransferase domain JC622_RS08670 PF00999 Sodium/hydrogen exchanger family JC622_RS08670 PF02254 TrkA-N domain JC622_RS08675 PF13344 Haloacid dehalogenase-like hydrolase JC622_RS08680 PF00962 Adenosine/AMP deaminase JC622_RS08685 PF00107 Zinc-binding dehydrogenase JC622_RS08685 PF08240 Alcohol dehydrogenase GroES-like domain JC622_RS08690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JC622_RS08695 PF03741 Integral membrane protein TerC family JC622_RS08695 PF03471 Transporter associated domain JC622_RS08820 PF08461 Ribonuclease R winged-helix domain JC622_RS08825 PF11985 Protein of unknown function (DUF3486) JC622_RS08830 PF03237 Terminase-like family JC622_RS08835 PF06074 Protein of unknown function (DUF935) JC622_RS08855 PF10123 Mu-like prophage I protein JC622_RS08860 PF10124 Mu-like prophage major head subunit gpT JC622_RS08935 PF13183 4Fe-4S dicluster domain JC622_RS08935 PF01565 FAD binding domain JC622_RS08935 PF02913 FAD linked oxidases, C-terminal domain JC622_RS08945 PF03061 Thioesterase superfamily JC622_RS08950 PF00270 DEAD/DEAH box helicase JC622_RS08950 PF03880 DbpA RNA binding domain JC622_RS08950 PF00271 Helicase conserved C-terminal domain JC622_RS08960 PF13188 PAS domain JC622_RS08960 PF03707 Bacterial signalling protein N terminal repeat JC622_RS08960 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS08960 PF00563 EAL domain JC622_RS08965 PF03553 Na+/H+ antiporter family JC622_RS08965 PF13726 Na+-H+ antiporter family JC622_RS08970 PF00929 Exonuclease JC622_RS08975 PF01569 PAP2 superfamily JC622_RS08980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JC622_RS08980 PF11890 Domain of unknown function (DUF3410) JC622_RS08980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JC622_RS08985 PF01118 Semialdehyde dehydrogenase, NAD binding domain JC622_RS08985 PF02774 Semialdehyde dehydrogenase, dimerisation domain JC622_RS08995 PF01416 tRNA pseudouridine synthase JC622_RS09000 PF17848 Acetyl-coA carboxylase zinc finger domain JC622_RS09000 PF01039 Carboxyl transferase domain JC622_RS09005 PF02875 Mur ligase family, glutamate ligase domain JC622_RS09005 PF08245 Mur ligase middle domain JC622_RS09010 PF05036 Sporulation related domain JC622_RS09015 PF01906 Putative heavy-metal-binding JC622_RS09025 PF10414 Sirohaem synthase dimerisation region JC622_RS09025 PF14824 Sirohaem biosynthesis protein central JC622_RS09025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC622_RS09030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JC622_RS09030 PF13187 4Fe-4S dicluster domain JC622_RS09030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JC622_RS09035 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JC622_RS09035 PF00175 Oxidoreductase NAD-binding domain JC622_RS09040 PF17179 4Fe-4S dicluster domain JC622_RS09045 PF01734 Patatin-like phospholipase JC622_RS09050 PF17676 LD-carboxypeptidase C-terminal domain JC622_RS09050 PF02016 LD-carboxypeptidase N-terminal domain JC622_RS09055 PF00884 Sulfatase JC622_RS09065 PF01842 ACT domain JC622_RS09065 PF00696 Amino acid kinase family JC622_RS09070 PF00696 Amino acid kinase family JC622_RS09070 PF00583 Acetyltransferase (GNAT) family JC622_RS09075 PF01625 Peptide methionine sulfoxide reductase JC622_RS09095 PF00561 alpha/beta hydrolase fold JC622_RS09120 PF02687 FtsX-like permease family JC622_RS09120 PF12704 MacB-like periplasmic core domain JC622_RS09125 PF00005 ABC transporter JC622_RS09135 PF03600 Citrate transporter JC622_RS09140 PF07690 Major Facilitator Superfamily JC622_RS09155 PF01593 Flavin containing amine oxidoreductase JC622_RS09160 PF03239 Iron permease FTR1 family JC622_RS09175 PF03350 Uncharacterized protein family, UPF0114 JC622_RS09195 PF05598 Transposase domain (DUF772) JC622_RS09195 PF01609 Transposase DDE domain JC622_RS09230 PF01906 Putative heavy-metal-binding JC622_RS09290 PF00589 Phage integrase family JC622_RS09290 PF13356 Arm DNA-binding domain JC622_RS09305 PF01740 STAS domain JC622_RS09305 PF00916 Sulfate permease family JC622_RS09330 PF02796 Helix-turn-helix domain of resolvase JC622_RS09330 PF00239 Resolvase, N terminal domain JC622_RS09345 PF09924 Uncharacterised conserved protein (DUF2156) JC622_RS09345 PF03706 Lysylphosphatidylglycerol synthase TM region JC622_RS09360 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS09360 PF00672 HAMP domain JC622_RS09360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS09365 PF00072 Response regulator receiver domain JC622_RS09365 PF00486 Transcriptional regulatory protein, C terminal JC622_RS09385 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JC622_RS09385 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JC622_RS09390 PF00313 'Cold-shock' DNA-binding domain JC622_RS09395 PF02617 ATP-dependent Clp protease adaptor protein ClpS JC622_RS09400 PF00004 ATPase family associated with various cellular activities (AAA) JC622_RS09400 PF02861 Clp amino terminal domain, pathogenicity island component JC622_RS09400 PF17871 AAA lid domain JC622_RS09400 PF10431 C-terminal, D2-small domain, of ClpB protein JC622_RS09400 PF07724 AAA domain (Cdc48 subfamily) JC622_RS09405 PF01176 Translation initiation factor 1A / IF-1 JC622_RS09410 PF04376 Arginine-tRNA-protein transferase, N terminus JC622_RS09410 PF04377 Arginine-tRNA-protein transferase, C terminus JC622_RS09415 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JC622_RS09420 PF05433 Glycine zipper 2TM domain JC622_RS09425 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS09425 PF17158 Membrane-associated sensor, integral membrane domain JC622_RS09430 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS09435 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JC622_RS09435 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JC622_RS09440 PF01037 Lrp/AsnC ligand binding domain JC622_RS09445 PF01580 FtsK/SpoIIIE family JC622_RS09445 PF09397 Ftsk gamma domain JC622_RS09445 PF17854 FtsK alpha domain JC622_RS09445 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JC622_RS09450 PF03548 Outer membrane lipoprotein carrier protein LolA JC622_RS09455 PF00004 ATPase family associated with various cellular activities (AAA) JC622_RS09455 PF16193 AAA C-terminal domain JC622_RS09455 PF12002 MgsA AAA+ ATPase C terminal JC622_RS09460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC622_RS09460 PF02403 Seryl-tRNA synthetase N-terminal domain JC622_RS09465 PF02674 Colicin V production protein JC622_RS09470 PF00156 Phosphoribosyl transferase domain JC622_RS09475 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JC622_RS09480 PF05191 Adenylate kinase, active site lid JC622_RS09485 PF00762 Ferrochelatase JC622_RS09495 PF00294 pfkB family carbohydrate kinase JC622_RS09510 PF03707 Bacterial signalling protein N terminal repeat JC622_RS09510 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS09510 PF00563 EAL domain JC622_RS09515 PF00483 Nucleotidyl transferase JC622_RS09525 PF07273 Protein of unknown function (DUF1439) JC622_RS09535 PF11143 Protein of unknown function (DUF2919) JC622_RS09540 PF01544 CorA-like Mg2+ transporter protein JC622_RS09550 PF01012 Electron transfer flavoprotein domain JC622_RS09555 PF00766 Electron transfer flavoprotein FAD-binding domain JC622_RS09555 PF01012 Electron transfer flavoprotein domain JC622_RS09560 PF00266 Aminotransferase class-V JC622_RS09565 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JC622_RS09570 PF00793 DAHP synthetase I family JC622_RS09575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS09575 PF00672 HAMP domain JC622_RS09580 PF04055 Radical SAM superfamily JC622_RS09585 PF00271 Helicase conserved C-terminal domain JC622_RS09585 PF00270 DEAD/DEAH box helicase JC622_RS09590 PF00255 Glutathione peroxidase JC622_RS09635 PF07478 D-ala D-ala ligase C-terminus JC622_RS09635 PF01820 D-ala D-ala ligase N-terminus JC622_RS09640 PF09261 Alpha mannosidase middle domain JC622_RS09640 PF07748 Glycosyl hydrolases family 38 C-terminal domain JC622_RS09640 PF01074 Glycosyl hydrolases family 38 N-terminal domain JC622_RS09645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC622_RS09645 PF02378 Phosphotransferase system, EIIC JC622_RS09645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC622_RS09650 PF00392 Bacterial regulatory proteins, gntR family JC622_RS09650 PF07702 UTRA domain JC622_RS09655 PF02601 Exonuclease VII, large subunit JC622_RS09655 PF13742 OB-fold nucleic acid binding domain JC622_RS09660 PF01292 Prokaryotic cytochrome b561 JC622_RS09665 PF00478 IMP dehydrogenase / GMP reductase domain JC622_RS09665 PF00571 CBS domain JC622_RS09670 PF00117 Glutamine amidotransferase class-I JC622_RS09670 PF00958 GMP synthase C terminal domain JC622_RS09670 PF02540 NAD synthase JC622_RS09690 PF02805 Metal binding domain of Ada JC622_RS09690 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JC622_RS09690 PF12833 Helix-turn-helix domain JC622_RS09690 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JC622_RS09705 PF05724 Thiopurine S-methyltransferase (TPMT) JC622_RS09710 PF00675 Insulinase (Peptidase family M16) JC622_RS09710 PF05193 Peptidase M16 inactive domain JC622_RS09710 PF16187 Middle or third domain of peptidase_M16 JC622_RS09715 PF00300 Histidine phosphatase superfamily (branch 1) JC622_RS09725 PF00892 EamA-like transporter family JC622_RS09730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC622_RS09735 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JC622_RS09740 PF00271 Helicase conserved C-terminal domain JC622_RS09740 PF03461 TRCF domain JC622_RS09740 PF02559 CarD-like/TRCF domain JC622_RS09740 PF00270 DEAD/DEAH box helicase JC622_RS09740 PF17757 UvrB interaction domain JC622_RS09750 PF02687 FtsX-like permease family JC622_RS09750 PF12704 MacB-like periplasmic core domain JC622_RS09755 PF00005 ABC transporter JC622_RS09760 PF02687 FtsX-like permease family JC622_RS09760 PF12704 MacB-like periplasmic core domain JC622_RS09775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JC622_RS09775 PF05698 Bacterial trigger factor protein (TF) C-terminus JC622_RS09775 PF05697 Bacterial trigger factor protein (TF) JC622_RS09780 PF00574 Clp protease JC622_RS09785 PF10431 C-terminal, D2-small domain, of ClpB protein JC622_RS09785 PF07724 AAA domain (Cdc48 subfamily) JC622_RS09785 PF06689 ClpX C4-type zinc finger JC622_RS09790 PF05362 Lon protease (S16) C-terminal proteolytic domain JC622_RS09790 PF02190 ATP-dependent protease La (LON) substrate-binding domain JC622_RS09790 PF00004 ATPase family associated with various cellular activities (AAA) JC622_RS09795 PF00216 Bacterial DNA-binding protein JC622_RS09800 PF13145 PPIC-type PPIASE domain JC622_RS09805 PF12848 ABC transporter JC622_RS09805 PF00005 ABC transporter JC622_RS09825 PF13737 Transposase DDE domain JC622_RS09860 PF00474 Sodium:solute symporter family JC622_RS09865 PF04341 Protein of unknown function, DUF485 JC622_RS09870 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JC622_RS09870 PF07733 Bacterial DNA polymerase III alpha NTPase domain JC622_RS09870 PF14579 Helix-hairpin-helix motif JC622_RS09870 PF02811 PHP domain JC622_RS09870 PF00929 Exonuclease JC622_RS09880 PF00378 Enoyl-CoA hydratase/isomerase JC622_RS09885 PF01235 Sodium:alanine symporter family JC622_RS09895 PF06167 Glucose-regulated metallo-peptidase M90 JC622_RS09915 PF01266 FAD dependent oxidoreductase JC622_RS09920 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS09925 PF00005 ABC transporter JC622_RS09935 PF07702 UTRA domain JC622_RS09935 PF00392 Bacterial regulatory proteins, gntR family JC622_RS09940 PF00266 Aminotransferase class-V JC622_RS09945 PF00202 Aminotransferase class-III JC622_RS09965 PF03918 Cytochrome C biogenesis protein JC622_RS09970 PF08534 Redoxin JC622_RS09975 PF01578 Cytochrome C assembly protein JC622_RS09975 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JC622_RS09980 PF03916 Polysulphide reductase, NrfD JC622_RS09985 PF00037 4Fe-4S binding domain JC622_RS09985 PF13247 4Fe-4S dicluster domain JC622_RS09990 PF13435 Cytochrome c554 and c-prime JC622_RS09990 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) JC622_RS09995 PF02335 Cytochrome c552 JC622_RS10010 PF13183 4Fe-4S dicluster domain JC622_RS10010 PF02754 Cysteine-rich domain JC622_RS10015 PF00890 FAD binding domain JC622_RS10020 PF04324 BFD-like [2Fe-2S] binding domain JC622_RS10020 PF01266 FAD dependent oxidoreductase JC622_RS10025 PF02810 SEC-C motif JC622_RS10030 PF17200 Single Cache domain 2 JC622_RS10030 PF00672 HAMP domain JC622_RS10030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS10035 PF00480 ROK family JC622_RS10035 PF01047 MarR family JC622_RS10040 PF03942 DTW domain JC622_RS10045 PF01925 Sulfite exporter TauE/SafE JC622_RS10050 PF03466 LysR substrate binding domain JC622_RS10050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS10060 PF12833 Helix-turn-helix domain JC622_RS10060 PF14525 AraC-binding-like domain JC622_RS10065 PF11398 Protein of unknown function (DUF2813) JC622_RS10075 PF00128 Alpha amylase, catalytic domain JC622_RS10075 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JC622_RS10100 PF02789 Cytosol aminopeptidase family, N-terminal domain JC622_RS10100 PF00883 Cytosol aminopeptidase family, catalytic domain JC622_RS10105 PF13419 Haloacid dehalogenase-like hydrolase JC622_RS10120 PF01207 Dihydrouridine synthase (Dus) JC622_RS10125 PF04304 Protein of unknown function (DUF454) JC622_RS10130 PF00156 Phosphoribosyl transferase domain JC622_RS10135 PF12170 DNA polymerase III tau subunit V interacting with alpha JC622_RS10135 PF12169 DNA polymerase III subunits gamma and tau domain III JC622_RS10135 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JC622_RS10140 PF02575 YbaB/EbfC DNA-binding family JC622_RS10145 PF01261 Xylose isomerase-like TIM barrel JC622_RS10150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS10150 PF03466 LysR substrate binding domain JC622_RS10160 PF03279 Bacterial lipid A biosynthesis acyltransferase JC622_RS10165 PF03279 Bacterial lipid A biosynthesis acyltransferase JC622_RS10180 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS10180 PF17151 Periplasmic sensor domain JC622_RS10190 PF00136 DNA polymerase family B JC622_RS10190 PF03104 DNA polymerase family B, exonuclease domain JC622_RS10205 PF01863 Protein of unknown function DUF45 JC622_RS10220 PF03606 C4-dicarboxylate anaerobic carrier JC622_RS10235 PF01266 FAD dependent oxidoreductase JC622_RS10235 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JC622_RS10240 PF02801 Beta-ketoacyl synthase, C-terminal domain JC622_RS10240 PF00109 Beta-ketoacyl synthase, N-terminal domain JC622_RS10245 PF02080 TrkA-C domain JC622_RS10245 PF06826 Predicted Permease Membrane Region JC622_RS10260 PF02151 UvrB/uvrC motif JC622_RS10260 PF12344 Ultra-violet resistance protein B JC622_RS10260 PF00271 Helicase conserved C-terminal domain JC622_RS10260 PF17757 UvrB interaction domain JC622_RS10260 PF04851 Type III restriction enzyme, res subunit JC622_RS10270 PF09335 SNARE associated Golgi protein JC622_RS10275 PF02600 Disulfide bond formation protein DsbB JC622_RS10280 PF06450 Bacterial Na+/H+ antiporter B (NhaB) JC622_RS10285 PF07840 FadR C-terminal domain JC622_RS10285 PF00392 Bacterial regulatory proteins, gntR family JC622_RS10295 PF07152 YaeQ protein JC622_RS10310 PF00158 Sigma-54 interaction domain JC622_RS10310 PF13188 PAS domain JC622_RS10310 PF02954 Bacterial regulatory protein, Fis family JC622_RS10340 PF01554 MatE JC622_RS10345 PF06786 Uncharacterised protein family (UPF0253) JC622_RS10355 PF00677 Lumazine binding domain JC622_RS10365 PF13419 Haloacid dehalogenase-like hydrolase JC622_RS10370 PF01370 NAD dependent epimerase/dehydratase family JC622_RS10370 PF02222 ATP-grasp domain JC622_RS10375 PF00892 EamA-like transporter family JC622_RS10380 PF02525 Flavodoxin-like fold JC622_RS10405 PF17783 CvfB-like winged helix domain JC622_RS10405 PF13509 S1 domain JC622_RS10415 PF04269 Protein of unknown function, DUF440 JC622_RS10420 PF00912 Transglycosylase JC622_RS10425 PF04269 Protein of unknown function, DUF440 JC622_RS10430 PF03776 Septum formation topological specificity factor MinE JC622_RS10435 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JC622_RS10440 PF03775 Septum formation inhibitor MinC, C-terminal domain JC622_RS10440 PF05209 Septum formation inhibitor MinC, N-terminal domain JC622_RS10445 PF05166 YcgL domain JC622_RS10450 PF03313 Serine dehydratase alpha chain JC622_RS10450 PF03315 Serine dehydratase beta chain JC622_RS10455 PF03313 Serine dehydratase alpha chain JC622_RS10455 PF03315 Serine dehydratase beta chain JC622_RS10460 PF06865 Pyrimidine/purine nucleoside phosphorylase JC622_RS10465 PF13808 DDE_Tnp_1-associated JC622_RS10465 PF01609 Transposase DDE domain JC622_RS10470 PF05598 Transposase domain (DUF772) JC622_RS10470 PF01609 Transposase DDE domain JC622_RS10475 PF00375 Sodium:dicarboxylate symporter family JC622_RS10480 PF00365 Phosphofructokinase JC622_RS10485 PF00121 Triosephosphate isomerase JC622_RS10490 PF02698 DUF218 domain JC622_RS10495 PF13847 Methyltransferase domain JC622_RS10500 PF17193 MukF C-terminal domain JC622_RS10500 PF03882 MukF winged-helix domain JC622_RS10500 PF17192 MukF middle domain JC622_RS10505 PF04288 MukE-like family JC622_RS10510 PF04310 MukB N-terminal JC622_RS10510 PF16330 MukB hinge domain JC622_RS10515 PF03330 Lytic transglycolase JC622_RS10550 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JC622_RS10550 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JC622_RS10555 PF00291 Pyridoxal-phosphate dependent enzyme JC622_RS10560 PF01546 Peptidase family M20/M25/M40 JC622_RS10560 PF07687 Peptidase dimerisation domain JC622_RS10565 PF01979 Amidohydrolase family JC622_RS10570 PF00696 Amino acid kinase family JC622_RS10575 PF07690 Major Facilitator Superfamily JC622_RS10580 PF00005 ABC transporter JC622_RS10585 PF01032 FecCD transport family JC622_RS10590 PF01497 Periplasmic binding protein JC622_RS10595 PF00892 EamA-like transporter family JC622_RS10600 PF02625 XdhC and CoxI family JC622_RS10600 PF13478 XdhC Rossmann domain JC622_RS10610 PF12804 MobA-like NTP transferase domain JC622_RS10615 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JC622_RS10615 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS10620 PF01979 Amidohydrolase family JC622_RS10625 PF00941 FAD binding domain in molybdopterin dehydrogenase JC622_RS10630 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JC622_RS10630 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JC622_RS10630 PF01799 [2Fe-2S] binding domain JC622_RS10635 PF00860 Permease family JC622_RS10640 PF01979 Amidohydrolase family JC622_RS10645 PF00860 Permease family JC622_RS10650 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JC622_RS10650 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JC622_RS10655 PF03450 CO dehydrogenase flavoprotein C-terminal domain JC622_RS10655 PF00941 FAD binding domain in molybdopterin dehydrogenase JC622_RS10660 PF01799 [2Fe-2S] binding domain JC622_RS10660 PF00111 2Fe-2S iron-sulfur cluster binding domain JC622_RS10665 PF05433 Glycine zipper 2TM domain JC622_RS10675 PF00501 AMP-binding enzyme JC622_RS10675 PF13193 AMP-binding enzyme C-terminal domain JC622_RS10680 PF07694 5TMR of 5TMR-LYT JC622_RS10680 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS10690 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS10690 PF08448 PAS fold JC622_RS10700 PF00300 Histidine phosphatase superfamily (branch 1) JC622_RS10705 PF08448 PAS fold JC622_RS10705 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS10710 PF01713 Smr domain JC622_RS10715 PF05175 Methyltransferase small domain JC622_RS10720 PF01264 Chorismate synthase JC622_RS10730 PF00271 Helicase conserved C-terminal domain JC622_RS10730 PF00270 DEAD/DEAH box helicase JC622_RS10745 PF01124 MAPEG family JC622_RS10755 PF03222 Tryptophan/tyrosine permease family JC622_RS10760 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JC622_RS10760 PF00356 Bacterial regulatory proteins, lacI family JC622_RS10765 PF00381 PTS HPr component phosphorylation site JC622_RS10765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC622_RS10770 PF00294 pfkB family carbohydrate kinase JC622_RS10775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC622_RS10775 PF02378 Phosphotransferase system, EIIC JC622_RS10780 PF06560 Glucose-6-phosphate isomerase (GPI) JC622_RS10785 PF00356 Bacterial regulatory proteins, lacI family JC622_RS10785 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JC622_RS10800 PF03610 PTS system fructose IIA component JC622_RS10800 PF03830 PTS system sorbose subfamily IIB component JC622_RS10805 PF03609 PTS system sorbose-specific iic component JC622_RS10810 PF03613 PTS system mannose/fructose/sorbose family IID component JC622_RS10820 PF06945 Protein of unknown function (DUF1289) JC622_RS10825 PF06725 3D domain JC622_RS10825 PF03562 MltA specific insert domain JC622_RS10830 PF00111 2Fe-2S iron-sulfur cluster binding domain JC622_RS10835 PF00268 Ribonucleotide reductase, small chain JC622_RS10840 PF03477 ATP cone domain JC622_RS10840 PF02867 Ribonucleotide reductase, barrel domain JC622_RS10840 PF00317 Ribonucleotide reductase, all-alpha domain JC622_RS10845 PF13419 Haloacid dehalogenase-like hydrolase JC622_RS10855 PF03989 DNA gyrase C-terminal domain, beta-propeller JC622_RS10855 PF00521 DNA gyrase/topoisomerase IV, subunit A JC622_RS10860 PF00128 Alpha amylase, catalytic domain JC622_RS10870 PF04055 Radical SAM superfamily JC622_RS10880 PF03129 Anticodon binding domain JC622_RS10880 PF02824 TGS domain JC622_RS10880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC622_RS10880 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC622_RS10885 PF00707 Translation initiation factor IF-3, C-terminal domain JC622_RS10885 PF05198 Translation initiation factor IF-3, N-terminal domain JC622_RS10890 PF01632 Ribosomal protein L35 JC622_RS10895 PF00453 Ribosomal protein L20 JC622_RS10900 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JC622_RS10900 PF01409 tRNA synthetases class II core domain (F) JC622_RS10905 PF01588 Putative tRNA binding domain JC622_RS10905 PF03147 Ferredoxin-fold anticodon binding domain JC622_RS10905 PF03484 tRNA synthetase B5 domain JC622_RS10905 PF03483 B3/4 domain JC622_RS10905 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JC622_RS10910 PF00216 Bacterial DNA-binding protein JC622_RS10915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS10915 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS10915 PF09456 RcsC Alpha-Beta-Loop (ABL) JC622_RS10915 PF00072 Response regulator receiver domain JC622_RS10930 PF02146 Sir2 family JC622_RS10940 PF00563 EAL domain JC622_RS10940 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS10940 PF03707 Bacterial signalling protein N terminal repeat JC622_RS10945 PF00356 Bacterial regulatory proteins, lacI family JC622_RS10950 PF00294 pfkB family carbohydrate kinase JC622_RS10955 PF13407 Periplasmic binding protein domain JC622_RS10960 PF02653 Branched-chain amino acid transport system / permease component JC622_RS10965 PF00005 ABC transporter JC622_RS10970 PF05025 RbsD / FucU transport protein family JC622_RS10975 PF00043 Glutathione S-transferase, C-terminal domain JC622_RS10975 PF02798 Glutathione S-transferase, N-terminal domain JC622_RS10985 PF13416 Bacterial extracellular solute-binding protein JC622_RS10990 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS10995 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS11000 PF00005 ABC transporter JC622_RS11000 PF08402 TOBE domain JC622_RS11015 PF01171 PP-loop family JC622_RS11020 PF00582 Universal stress protein family JC622_RS11025 PF13545 Crp-like helix-turn-helix domain JC622_RS11025 PF00027 Cyclic nucleotide-binding domain JC622_RS11040 PF00403 Heavy-metal-associated domain JC622_RS11050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JC622_RS11050 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JC622_RS11065 PF00115 Cytochrome C and Quinol oxidase polypeptide I JC622_RS11075 PF13185 GAF domain JC622_RS11080 PF04352 ProQ/FINO family JC622_RS11080 PF17516 ProQ C-terminal domain JC622_RS11085 PF11818 C-terminal domain of tail specific protease (DUF3340) JC622_RS11085 PF00595 PDZ domain JC622_RS11085 PF03572 Peptidase family S41 JC622_RS11085 PF17804 Tail specific protease N-terminal domain JC622_RS11090 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JC622_RS11090 PF11940 Domain of unknown function (DUF3458) Ig-like fold JC622_RS11090 PF01433 Peptidase family M1 domain JC622_RS11100 PF05088 Bacterial NAD-glutamate dehydrogenase JC622_RS11105 PF01180 Dihydroorotate dehydrogenase JC622_RS11110 PF07126 Cell-division protein ZapC JC622_RS11115 PF01197 Ribosomal protein L31 JC622_RS11120 PF00444 Ribosomal protein L36 JC622_RS11125 PF10672 S-adenosylmethionine-dependent methyltransferase JC622_RS11125 PF02926 THUMP domain JC622_RS11125 PF01170 Putative RNA methylase family UPF0020 JC622_RS11145 PF01674 Lipase (class 2) JC622_RS11150 PF07130 YebG protein JC622_RS11180 PF13654 AAA domain JC622_RS11180 PF05362 Lon protease (S16) C-terminal proteolytic domain JC622_RS11185 PF07977 FabA-like domain JC622_RS11190 PF04957 Ribosome modulation factor JC622_RS11195 PF12848 ABC transporter JC622_RS11195 PF00005 ABC transporter JC622_RS11195 PF16326 ABC transporter C-terminal domain JC622_RS11230 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain JC622_RS11230 PF06974 Protein of unknown function (DUF1298) JC622_RS11245 PF03972 MmgE/PrpD family JC622_RS11250 PF00285 Citrate synthase, C-terminal domain JC622_RS11265 PF04403 Paraquat-inducible protein A JC622_RS11270 PF02470 MlaD protein JC622_RS11275 PF01189 16S rRNA methyltransferase RsmB/F JC622_RS11275 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JC622_RS11275 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF JC622_RS11285 PF00589 Phage integrase family JC622_RS11290 PF01026 TatD related DNase JC622_RS11295 PF09115 DNA polymerase III, delta subunit, C terminal JC622_RS11300 PF02223 Thymidylate kinase JC622_RS11305 PF02618 YceG-like family JC622_RS11310 PF01063 Amino-transferase class IV JC622_RS11315 PF00109 Beta-ketoacyl synthase, N-terminal domain JC622_RS11315 PF02801 Beta-ketoacyl synthase, C-terminal domain JC622_RS11320 PF00550 Phosphopantetheine attachment site JC622_RS11330 PF00698 Acyl transferase domain JC622_RS11335 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JC622_RS11335 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JC622_RS11340 PF02504 Fatty acid synthesis protein JC622_RS11345 PF01783 Ribosomal L32p protein family JC622_RS11350 PF02620 Large ribosomal RNA subunit accumulation protein YceD JC622_RS11355 PF02545 Maf-like protein JC622_RS11360 PF13419 Haloacid dehalogenase-like hydrolase JC622_RS11365 PF00849 RNA pseudouridylate synthase JC622_RS11365 PF01479 S4 domain JC622_RS11370 PF12111 Polyribonucleotide phosphorylase C terminal JC622_RS11370 PF10150 Ribonuclease E/G family JC622_RS11370 PF00575 S1 RNA binding domain JC622_RS11380 PF01384 Phosphate transporter family JC622_RS11385 PF00692 dUTPase JC622_RS11390 PF00485 Phosphoribulokinase / Uridine kinase family JC622_RS11395 PF10609 NUBPL iron-transfer P-loop NTPase JC622_RS11400 PF01588 Putative tRNA binding domain JC622_RS11400 PF08264 Anticodon-binding domain of tRNA JC622_RS11400 PF09334 tRNA synthetases class I (M) JC622_RS11410 PF00708 Acylphosphatase JC622_RS11415 PF00672 HAMP domain JC622_RS11415 PF12729 Four helix bundle sensory module for signal transduction JC622_RS11415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS11420 PF10672 S-adenosylmethionine-dependent methyltransferase JC622_RS11420 PF17785 PUA-like domain JC622_RS11440 PF04245 37-kD nucleoid-associated bacterial protein JC622_RS11445 PF02769 AIR synthase related protein, C-terminal domain JC622_RS11445 PF00586 AIR synthase related protein, N-terminal domain JC622_RS11455 PF00753 Metallo-beta-lactamase superfamily JC622_RS11460 PF01612 3'-5' exonuclease JC622_RS11460 PF00570 HRDC domain JC622_RS11465 PF13193 AMP-binding enzyme C-terminal domain JC622_RS11465 PF00501 AMP-binding enzyme JC622_RS11470 PF12697 Alpha/beta hydrolase family JC622_RS11480 PF00814 Glycoprotease family JC622_RS11485 PF04851 Type III restriction enzyme, res subunit JC622_RS11485 PF13307 Helicase C-terminal domain JC622_RS11495 PF01634 ATP phosphoribosyltransferase JC622_RS11495 PF08029 HisG, C-terminal domain JC622_RS11500 PF00815 Histidinol dehydrogenase JC622_RS11505 PF00155 Aminotransferase class I and II JC622_RS11510 PF00475 Imidazoleglycerol-phosphate dehydratase JC622_RS11510 PF08645 Polynucleotide kinase 3 phosphatase JC622_RS11515 PF00117 Glutamine amidotransferase class-I JC622_RS11520 PF00977 Histidine biosynthesis protein JC622_RS11525 PF00977 Histidine biosynthesis protein JC622_RS11530 PF01502 Phosphoribosyl-AMP cyclohydrolase JC622_RS11530 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JC622_RS11545 PF03831 PhnA domain JC622_RS11545 PF08274 PhnA Zinc-Ribbon JC622_RS11555 PF00425 chorismate binding enzyme JC622_RS11555 PF04715 Anthranilate synthase component I, N terminal region JC622_RS11560 PF00293 NUDIX domain JC622_RS11565 PF03222 Tryptophan/tyrosine permease family JC622_RS11570 PF00375 Sodium:dicarboxylate symporter family JC622_RS11575 PF16124 RecQ zinc-binding JC622_RS11575 PF00271 Helicase conserved C-terminal domain JC622_RS11575 PF00270 DEAD/DEAH box helicase JC622_RS11575 PF00570 HRDC domain JC622_RS11575 PF09382 RQC domain JC622_RS11580 PF08298 PrkA AAA domain JC622_RS11580 PF06798 PrkA serine protein kinase C-terminal domain JC622_RS11585 PF04285 Protein of unknown function (DUF444) JC622_RS11590 PF04293 SpoVR like protein JC622_RS11595 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JC622_RS11595 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JC622_RS11595 PF00378 Enoyl-CoA hydratase/isomerase JC622_RS11600 PF00108 Thiolase, N-terminal domain JC622_RS11600 PF02803 Thiolase, C-terminal domain JC622_RS11605 PF07726 ATPase family associated with various cellular activities (AAA) JC622_RS11605 PF17863 AAA lid domain JC622_RS11610 PF01882 Protein of unknown function DUF58 JC622_RS11625 PF13519 von Willebrand factor type A domain JC622_RS11635 PF08281 Sigma-70, region 4 JC622_RS11635 PF04542 Sigma-70 region 2 JC622_RS11645 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JC622_RS11650 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JC622_RS11655 PF08668 HDOD domain JC622_RS11655 PF00563 EAL domain JC622_RS11660 PF00108 Thiolase, N-terminal domain JC622_RS11660 PF02803 Thiolase, C-terminal domain JC622_RS11665 PF00376 MerR family regulatory protein JC622_RS11665 PF09278 MerR, DNA binding JC622_RS11670 PF01386 Ribosomal L25p family JC622_RS11680 PF00270 DEAD/DEAH box helicase JC622_RS11680 PF11898 Domain of unknown function (DUF3418) JC622_RS11680 PF00271 Helicase conserved C-terminal domain JC622_RS11680 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JC622_RS11680 PF04408 Helicase associated domain (HA2) JC622_RS11685 PF00571 CBS domain JC622_RS11685 PF01368 DHH family JC622_RS11685 PF02272 DHHA1 domain JC622_RS11685 PF01743 Poly A polymerase head domain JC622_RS11690 PF01966 HD domain JC622_RS11695 PF00884 Sulfatase JC622_RS11700 PF07726 ATPase family associated with various cellular activities (AAA) JC622_RS11700 PF17863 AAA lid domain JC622_RS11715 PF13519 von Willebrand factor type A domain JC622_RS11715 PF07584 Aerotolerance regulator N-terminal JC622_RS11720 PF13519 von Willebrand factor type A domain JC622_RS11720 PF07584 Aerotolerance regulator N-terminal JC622_RS11730 PF03466 LysR substrate binding domain JC622_RS11730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS11735 PF03781 Sulfatase-modifying factor enzyme 1 JC622_RS11745 PF04055 Radical SAM superfamily JC622_RS11745 PF13186 Iron-sulfur cluster-binding domain JC622_RS11750 PF08411 Exonuclease C-terminal JC622_RS11750 PF00929 Exonuclease JC622_RS11765 PF03788 LrgA family JC622_RS11770 PF04172 LrgB-like family JC622_RS11775 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region JC622_RS11775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JC622_RS11780 PF01212 Beta-eliminating lyase JC622_RS11790 PF04244 Deoxyribodipyrimidine photo-lyase-related protein JC622_RS11795 PF01266 FAD dependent oxidoreductase JC622_RS11800 PF01118 Semialdehyde dehydrogenase, NAD binding domain JC622_RS11800 PF02774 Semialdehyde dehydrogenase, dimerisation domain JC622_RS11805 PF02634 FdhD/NarQ family JC622_RS11810 PF01590 GAF domain JC622_RS11810 PF02954 Bacterial regulatory protein, Fis family JC622_RS11810 PF00158 Sigma-54 interaction domain JC622_RS11825 PF13247 4Fe-4S dicluster domain JC622_RS11825 PF12800 4Fe-4S binding domain JC622_RS11835 PF02705 K+ potassium transporter JC622_RS11840 PF00037 4Fe-4S binding domain JC622_RS11840 PF12798 4Fe-4S binding domain JC622_RS11845 PF00361 Proton-conducting membrane transporter JC622_RS11850 PF00146 NADH dehydrogenase JC622_RS11855 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JC622_RS11855 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JC622_RS11855 PF00374 Nickel-dependent hydrogenase JC622_RS11860 PF12838 4Fe-4S dicluster domain JC622_RS11865 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JC622_RS11870 PF07450 Formate hydrogenlyase maturation protein HycH JC622_RS11875 PF01750 Hydrogenase maturation protease JC622_RS11885 PF12390 Selenocysteine synthase N terminal JC622_RS11885 PF03841 L-seryl-tRNA selenium transferase JC622_RS11890 PF09105 Elongation factor SelB, winged helix JC622_RS11890 PF03144 Elongation factor Tu domain 2 JC622_RS11890 PF09106 Elongation factor SelB, winged helix JC622_RS11890 PF00009 Elongation factor Tu GTP binding domain JC622_RS11890 PF09107 Elongation factor SelB, winged helix JC622_RS11895 PF07503 HypF finger JC622_RS11895 PF17788 HypF Kae1-like domain JC622_RS11895 PF00708 Acylphosphatase JC622_RS11895 PF01300 Telomere recombination JC622_RS11900 PF01455 HupF/HypC family JC622_RS11905 PF01924 Hydrogenase formation hypA family JC622_RS11910 PF00586 AIR synthase related protein, N-terminal domain JC622_RS11910 PF02769 AIR synthase related protein, C-terminal domain JC622_RS11915 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA JC622_RS11925 PF02492 CobW/HypB/UreG, nucleotide-binding domain JC622_RS11930 PF00005 ABC transporter JC622_RS11930 PF08402 TOBE domain JC622_RS11935 PF00005 ABC transporter JC622_RS11940 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS11940 PF12911 N-terminal TM domain of oligopeptide transport permease C JC622_RS11945 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS11950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC622_RS11955 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE JC622_RS11960 PF01750 Hydrogenase maturation protease JC622_RS11965 PF00374 Nickel-dependent hydrogenase JC622_RS11970 PF03916 Polysulphide reductase, NrfD JC622_RS11975 PF13247 4Fe-4S dicluster domain JC622_RS11980 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal JC622_RS11980 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JC622_RS11985 PF00563 EAL domain JC622_RS11985 PF00360 Phytochrome region JC622_RS11985 PF01590 GAF domain JC622_RS11985 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS11990 PF00862 Sucrose synthase JC622_RS11990 PF00534 Glycosyl transferases group 1 JC622_RS11995 PF13439 Glycosyltransferase Family 4 JC622_RS11995 PF00534 Glycosyl transferases group 1 JC622_RS12070 PF13439 Glycosyltransferase Family 4 JC622_RS12070 PF00534 Glycosyl transferases group 1 JC622_RS12075 PF03552 Cellulose synthase JC622_RS12075 PF00535 Glycosyl transferase family 2 JC622_RS12075 PF07238 PilZ domain JC622_RS12080 PF02397 Bacterial sugar transferase JC622_RS12085 PF00534 Glycosyl transferases group 1 JC622_RS12090 PF00211 Adenylate and Guanylate cyclase catalytic domain JC622_RS12090 PF00072 Response regulator receiver domain JC622_RS12120 PF00072 Response regulator receiver domain JC622_RS12120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS12120 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS12120 PF09308 LuxQ, periplasmic JC622_RS12130 PF01925 Sulfite exporter TauE/SafE JC622_RS12135 PF13520 Amino acid permease JC622_RS12145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JC622_RS12145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JC622_RS12150 PF00378 Enoyl-CoA hydratase/isomerase JC622_RS12155 PF00378 Enoyl-CoA hydratase/isomerase JC622_RS12160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC622_RS12160 PF02770 Acyl-CoA dehydrogenase, middle domain JC622_RS12160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC622_RS12165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC622_RS12165 PF02770 Acyl-CoA dehydrogenase, middle domain JC622_RS12165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC622_RS12170 PF01039 Carboxyl transferase domain JC622_RS12175 PF00378 Enoyl-CoA hydratase/isomerase JC622_RS12185 PF00682 HMGL-like JC622_RS12190 PF00376 MerR family regulatory protein JC622_RS12190 PF09278 MerR, DNA binding JC622_RS12205 PF01184 GPR1/FUN34/yaaH family JC622_RS12215 PF00549 CoA-ligase JC622_RS12215 PF02629 CoA binding domain JC622_RS12220 PF08442 ATP-grasp domain JC622_RS12220 PF00549 CoA-ligase JC622_RS12225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JC622_RS12225 PF00364 Biotin-requiring enzyme JC622_RS12225 PF02817 e3 binding domain JC622_RS12230 PF02779 Transketolase, pyrimidine binding domain JC622_RS12230 PF00676 Dehydrogenase E1 component JC622_RS12230 PF16078 2-oxoglutarate dehydrogenase N-terminus JC622_RS12230 PF16870 2-oxoglutarate dehydrogenase C-terminal JC622_RS12235 PF13085 2Fe-2S iron-sulfur cluster binding domain JC622_RS12240 PF00890 FAD binding domain JC622_RS12240 PF02910 Fumarate reductase flavoprotein C-term JC622_RS12245 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JC622_RS12250 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JC622_RS12255 PF00285 Citrate synthase, C-terminal domain JC622_RS12265 PF13673 Acetyltransferase (GNAT) domain JC622_RS12275 PF01928 CYTH domain JC622_RS12320 PF02796 Helix-turn-helix domain of resolvase JC622_RS12320 PF00239 Resolvase, N terminal domain JC622_RS12360 PF11871 Domain of unknown function (DUF3391) JC622_RS12360 PF01966 HD domain JC622_RS12375 PF01609 Transposase DDE domain JC622_RS12375 PF13808 DDE_Tnp_1-associated JC622_RS12385 PF11999 Protein of unknown function (DUF3494) JC622_RS12385 PF02368 Bacterial Ig-like domain (group 2) JC622_RS12395 PF01695 IstB-like ATP binding protein JC622_RS12400 PF00665 Integrase core domain JC622_RS12400 PF02796 Helix-turn-helix domain of resolvase JC622_RS12410 PF06508 Queuosine biosynthesis protein QueC JC622_RS12430 PF00665 Integrase core domain JC622_RS12435 PF01695 IstB-like ATP binding protein JC622_RS12485 PF08543 Phosphomethylpyrimidine kinase JC622_RS12510 PF00664 ABC transporter transmembrane region JC622_RS12510 PF00005 ABC transporter JC622_RS12515 PF00664 ABC transporter transmembrane region JC622_RS12515 PF00005 ABC transporter JC622_RS12520 PF00672 HAMP domain JC622_RS12520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS12520 PF01627 Hpt domain JC622_RS12520 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JC622_RS12520 PF00072 Response regulator receiver domain JC622_RS12520 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS12525 PF00085 Thioredoxin JC622_RS12530 PF00939 Sodium:sulfate symporter transmembrane region JC622_RS12535 PF00343 Carbohydrate phosphorylase JC622_RS12550 PF03692 Putative zinc- or iron-chelating domain JC622_RS12560 PF02901 Pyruvate formate lyase-like JC622_RS12560 PF01228 Glycine radical JC622_RS12565 PF01226 Formate/nitrite transporter JC622_RS12570 PF18381 YcaO cyclodehydratase C-terminal domain JC622_RS12570 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding JC622_RS12575 PF00232 Glycosyl hydrolase family 1 JC622_RS12580 PF03466 LysR substrate binding domain JC622_RS12580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS12585 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC622_RS12590 PF08267 Cobalamin-independent synthase, N-terminal domain JC622_RS12590 PF01717 Cobalamin-independent synthase, Catalytic domain JC622_RS12595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS12595 PF03466 LysR substrate binding domain JC622_RS12600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS12600 PF03466 LysR substrate binding domain JC622_RS12605 PF00857 Isochorismatase family JC622_RS12610 PF02678 Pirin JC622_RS12610 PF05726 Pirin C-terminal cupin domain JC622_RS12620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS12620 PF03466 LysR substrate binding domain JC622_RS12625 PF03466 LysR substrate binding domain JC622_RS12625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS12630 PF13460 NAD(P)H-binding JC622_RS12640 PF01053 Cys/Met metabolism PLP-dependent enzyme JC622_RS12645 PF00501 AMP-binding enzyme JC622_RS12650 PF08891 YfcL protein JC622_RS12660 PF03741 Integral membrane protein TerC family JC622_RS12665 PF00691 OmpA family JC622_RS12670 PF17152 Periplasmic sensor domain JC622_RS12670 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS12680 PF18024 Helix-turn-helix domain JC622_RS12680 PF00158 Sigma-54 interaction domain JC622_RS12685 PF01329 Pterin 4 alpha carbinolamine dehydratase JC622_RS12690 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JC622_RS12695 PF05128 Domain of unknown function (DUF697) JC622_RS12700 PF04317 YcjX-like family, DUF463 JC622_RS12710 PF06667 Phage shock protein B JC622_RS12715 PF04012 PspA/IM30 family JC622_RS12720 PF02954 Bacterial regulatory protein, Fis family JC622_RS12720 PF00158 Sigma-54 interaction domain JC622_RS12725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC622_RS12730 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS12735 PF12911 N-terminal TM domain of oligopeptide transport permease C JC622_RS12735 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS12740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC622_RS12740 PF00005 ABC transporter JC622_RS12745 PF00005 ABC transporter JC622_RS12750 PF00183 Hsp90 protein JC622_RS12750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS12755 PF02132 RecR protein JC622_RS12755 PF13662 Toprim domain JC622_RS12770 PF00239 Resolvase, N terminal domain JC622_RS12770 PF02796 Helix-turn-helix domain of resolvase JC622_RS12780 PF01609 Transposase DDE domain JC622_RS12805 PF10722 Putative bacterial sensory transduction regulator JC622_RS12815 PF00265 Thymidine kinase JC622_RS12820 PF03553 Na+/H+ antiporter family JC622_RS12825 PF00816 H-NS histone family JC622_RS12830 PF01923 Cobalamin adenosyltransferase JC622_RS12835 PF12843 Putative quorum-sensing-regulated virulence factor JC622_RS12840 PF04055 Radical SAM superfamily JC622_RS12845 PF06508 Queuosine biosynthesis protein QueC JC622_RS12860 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JC622_RS12865 PF18073 Rubredoxin metal binding domain JC622_RS12875 PF00216 Bacterial DNA-binding protein JC622_RS12880 PF00575 S1 RNA binding domain JC622_RS12885 PF02224 Cytidylate kinase JC622_RS12890 PF00925 GTP cyclohydrolase II JC622_RS12895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS12895 PF03466 LysR substrate binding domain JC622_RS12900 PF03466 LysR substrate binding domain JC622_RS12900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS12905 PF07690 Major Facilitator Superfamily JC622_RS12920 PF00881 Nitroreductase family JC622_RS12925 PF03806 AbgT putative transporter family JC622_RS12930 PF13188 PAS domain JC622_RS12930 PF00563 EAL domain JC622_RS12930 PF03707 Bacterial signalling protein N terminal repeat JC622_RS12930 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS12935 PF03466 LysR substrate binding domain JC622_RS12935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS12940 PF00072 Response regulator receiver domain JC622_RS12950 PF01212 Beta-eliminating lyase JC622_RS12955 PF00106 short chain dehydrogenase JC622_RS12965 PF00248 Aldo/keto reductase family JC622_RS12970 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JC622_RS12980 PF00005 ABC transporter JC622_RS12985 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS12990 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC622_RS12995 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS13000 PF03411 Penicillin-insensitive murein endopeptidase JC622_RS13010 PF04536 TPM domain JC622_RS13040 PF00239 Resolvase, N terminal domain JC622_RS13040 PF02796 Helix-turn-helix domain of resolvase JC622_RS13055 PF12008 Type I restriction and modification enzyme - subunit R C terminal JC622_RS13055 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JC622_RS13055 PF18766 SWI2/SNF2 ATPase JC622_RS13060 PF02384 N-6 DNA Methylase JC622_RS13065 PF01420 Type I restriction modification DNA specificity domain JC622_RS13080 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A JC622_RS13140 PF04002 RadC-like JAB domain JC622_RS13165 PF11809 Domain of unknown function (DUF3330) JC622_RS13165 PF00563 EAL domain JC622_RS13170 PF05052 MerE protein JC622_RS13175 PF13411 MerR HTH family regulatory protein JC622_RS13180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JC622_RS13180 PF00403 Heavy-metal-associated domain JC622_RS13180 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS13185 PF03203 MerC mercury resistance protein JC622_RS13190 PF00403 Heavy-metal-associated domain JC622_RS13195 PF02411 MerT mercuric transport protein JC622_RS13200 PF00376 MerR family regulatory protein JC622_RS13200 PF09278 MerR, DNA binding JC622_RS13230 PF03471 Transporter associated domain JC622_RS13230 PF00999 Sodium/hydrogen exchanger family JC622_RS13230 PF02080 TrkA-C domain JC622_RS13235 PF01625 Peptide methionine sulfoxide reductase JC622_RS13250 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS13250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JC622_RS13260 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JC622_RS13285 PF13610 DDE domain JC622_RS13295 PF02405 Permease MlaE JC622_RS13300 PF00005 ABC transporter JC622_RS13315 PF13610 DDE domain JC622_RS13325 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ JC622_RS13330 PF00239 Resolvase, N terminal domain JC622_RS13330 PF02796 Helix-turn-helix domain of resolvase JC622_RS13340 PF02796 Helix-turn-helix domain of resolvase JC622_RS13340 PF00239 Resolvase, N terminal domain JC622_RS13350 PF05930 Prophage CP4-57 regulatory protein (AlpA) JC622_RS13355 PF13148 Protein of unknown function (DUF3987) JC622_RS13365 PF00816 H-NS histone family JC622_RS13385 PF01695 IstB-like ATP binding protein JC622_RS13390 PF00665 Integrase core domain JC622_RS13395 PF13737 Transposase DDE domain JC622_RS13420 PF05598 Transposase domain (DUF772) JC622_RS13420 PF01609 Transposase DDE domain JC622_RS13435 PF00589 Phage integrase family JC622_RS13435 PF13356 Arm DNA-binding domain JC622_RS13440 PF01618 MotA/TolQ/ExbB proton channel family JC622_RS13445 PF00691 OmpA family JC622_RS13445 PF13677 Membrane MotB of proton-channel complex MotA/MotB JC622_RS13450 PF00593 TonB dependent receptor JC622_RS13450 PF07715 TonB-dependent Receptor Plug Domain JC622_RS13455 PF00326 Prolyl oligopeptidase family JC622_RS13455 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JC622_RS13475 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JC622_RS13480 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JC622_RS13485 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JC622_RS13485 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JC622_RS13495 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JC622_RS13495 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JC622_RS13500 PF00384 Molybdopterin oxidoreductase JC622_RS13500 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JC622_RS13500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JC622_RS13505 PF00146 NADH dehydrogenase JC622_RS13510 PF12838 4Fe-4S dicluster domain JC622_RS13515 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JC622_RS13520 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JC622_RS13525 PF00361 Proton-conducting membrane transporter JC622_RS13525 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JC622_RS13530 PF00361 Proton-conducting membrane transporter JC622_RS13535 PF00361 Proton-conducting membrane transporter JC622_RS13545 PF00072 Response regulator receiver domain JC622_RS13550 PF01966 HD domain JC622_RS13555 PF02769 AIR synthase related protein, C-terminal domain JC622_RS13555 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JC622_RS13555 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JC622_RS13560 PF01464 Transglycosylase SLT domain JC622_RS13560 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC622_RS13565 PF07191 zinc-ribbons JC622_RS13570 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JC622_RS13570 PF01926 50S ribosome-binding GTPase JC622_RS13575 PF13360 PQQ-like domain JC622_RS13580 PF09976 Tetratricopeptide repeat-like domain JC622_RS13585 PF03129 Anticodon binding domain JC622_RS13585 PF13393 Histidyl-tRNA synthetase JC622_RS13590 PF04551 GcpE protein JC622_RS13595 PF13464 Domain of unknown function (DUF4115) JC622_RS13605 PF04055 Radical SAM superfamily JC622_RS13610 PF00334 Nucleoside diphosphate kinase JC622_RS13615 PF12404 Peptidase JC622_RS13615 PF00883 Cytosol aminopeptidase family, catalytic domain JC622_RS13620 PF00883 Cytosol aminopeptidase family, catalytic domain JC622_RS13620 PF12404 Peptidase JC622_RS13625 PF00111 2Fe-2S iron-sulfur cluster binding domain JC622_RS13630 PF00012 Hsp70 protein JC622_RS13635 PF00226 DnaJ domain JC622_RS13635 PF07743 HSCB C-terminal oligomerisation domain JC622_RS13640 PF01521 Iron-sulphur cluster biosynthesis JC622_RS13645 PF01592 NifU-like N terminal domain JC622_RS13650 PF00266 Aminotransferase class-V JC622_RS13655 PF02082 Transcriptional regulator JC622_RS13660 PF00588 SpoU rRNA Methylase family JC622_RS13670 PF02036 SCP-2 sterol transfer family JC622_RS13675 PF01136 Peptidase family U32 JC622_RS13680 PF01136 Peptidase family U32 JC622_RS13685 PF07719 Tetratricopeptide repeat JC622_RS13685 PF13181 Tetratricopeptide repeat JC622_RS13695 PF07549 SecD/SecF GG Motif JC622_RS13695 PF02355 Protein export membrane protein JC622_RS13700 PF07549 SecD/SecF GG Motif JC622_RS13700 PF13721 SecD export protein N-terminal TM region JC622_RS13700 PF02355 Protein export membrane protein JC622_RS13705 PF02699 Preprotein translocase subunit JC622_RS13710 PF01702 Queuine tRNA-ribosyltransferase JC622_RS13715 PF02547 Queuosine biosynthesis protein JC622_RS13720 PF00571 CBS domain JC622_RS13725 PF00578 AhpC/TSA family JC622_RS13725 PF10417 C-terminal domain of 1-Cys peroxiredoxin JC622_RS13730 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS13730 PF13192 Thioredoxin domain JC622_RS13770 PF00664 ABC transporter transmembrane region JC622_RS13770 PF00005 ABC transporter JC622_RS13770 PF03412 Peptidase C39 family JC622_RS13775 PF04055 Radical SAM superfamily JC622_RS13775 PF16199 Radical_SAM C-terminal domain JC622_RS13780 PF00310 Glutamine amidotransferases class-II JC622_RS13780 PF04898 Glutamate synthase central domain JC622_RS13780 PF01645 Conserved region in glutamate synthase JC622_RS13780 PF01493 GXGXG motif JC622_RS13785 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JC622_RS13785 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS13795 PF00270 DEAD/DEAH box helicase JC622_RS13795 PF00271 Helicase conserved C-terminal domain JC622_RS13810 PF07670 Nucleoside recognition JC622_RS13810 PF02421 Ferrous iron transport protein B JC622_RS13810 PF07664 Ferrous iron transport protein B C terminus JC622_RS13820 PF01253 Translation initiation factor SUI1 JC622_RS13825 PF01169 Uncharacterized protein family UPF0016 JC622_RS13875 PF09190 DALR domain JC622_RS13875 PF01406 tRNA synthetases class I (C) catalytic domain JC622_RS13880 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JC622_RS13890 PF00149 Calcineurin-like phosphoesterase JC622_RS13900 PF04226 Transglycosylase associated protein JC622_RS13905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS13905 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS13905 PF08521 Two-component sensor kinase N-terminal JC622_RS13910 PF00072 Response regulator receiver domain JC622_RS13910 PF00486 Transcriptional regulatory protein, C terminal JC622_RS13925 PF01970 Tripartite tricarboxylate transporter TctA family JC622_RS13940 PF01695 IstB-like ATP binding protein JC622_RS13945 PF00665 Integrase core domain JC622_RS13965 PF13538 UvrD-like helicase C-terminal domain JC622_RS13980 PF02384 N-6 DNA Methylase JC622_RS13985 PF14338 Mrr N-terminal domain JC622_RS13985 PF04471 Restriction endonuclease JC622_RS13990 PF02447 GntP family permease JC622_RS13995 PF01370 NAD dependent epimerase/dehydratase family JC622_RS14000 PF01261 Xylose isomerase-like TIM barrel JC622_RS14005 PF00596 Class II Aldolase and Adducin N-terminal domain JC622_RS14010 PF17042 Nucleotide-binding C-terminal domain JC622_RS14010 PF07005 Sugar-binding N-terminal domain JC622_RS14015 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JC622_RS14015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JC622_RS14020 PF08220 DeoR-like helix-turn-helix domain JC622_RS14020 PF00455 DeoR C terminal sensor domain JC622_RS14040 PF00936 BMC domain JC622_RS14045 PF00936 BMC domain JC622_RS14050 PF00936 BMC domain JC622_RS14055 PF00171 Aldehyde dehydrogenase family JC622_RS14055 PF00465 Iron-containing alcohol dehydrogenase JC622_RS14065 PF00465 Iron-containing alcohol dehydrogenase JC622_RS14065 PF00171 Aldehyde dehydrogenase family JC622_RS14070 PF01228 Glycine radical JC622_RS14070 PF02901 Pyruvate formate lyase-like JC622_RS14075 PF13187 4Fe-4S dicluster domain JC622_RS14075 PF04055 Radical SAM superfamily JC622_RS14080 PF00936 BMC domain JC622_RS14085 PF06130 Phosphate propanoyltransferase JC622_RS14095 PF00893 Small Multidrug Resistance protein JC622_RS14100 PF00893 Small Multidrug Resistance protein JC622_RS14130 PF13356 Arm DNA-binding domain JC622_RS14130 PF00589 Phage integrase family JC622_RS14150 PF01066 CDP-alcohol phosphatidyltransferase JC622_RS14155 PF02151 UvrB/uvrC motif JC622_RS14155 PF01541 GIY-YIG catalytic domain JC622_RS14155 PF08459 UvrC Helix-hairpin-helix N-terminal JC622_RS14160 PF00196 Bacterial regulatory proteins, luxR family JC622_RS14160 PF00072 Response regulator receiver domain JC622_RS14165 PF02348 Cytidylyltransferase JC622_RS14170 PF03966 Trm112p-like protein JC622_RS14175 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JC622_RS14180 PF00664 ABC transporter transmembrane region JC622_RS14180 PF00005 ABC transporter JC622_RS14185 PF03772 Competence protein JC622_RS14185 PF00753 Metallo-beta-lactamase superfamily JC622_RS14200 PF00155 Aminotransferase class I and II JC622_RS14210 PF03466 LysR substrate binding domain JC622_RS14210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS14215 PF04219 Protein of unknown function, DUF JC622_RS14220 PF03974 Ecotin JC622_RS14225 PF03009 Glycerophosphoryl diester phosphodiesterase family JC622_RS14230 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JC622_RS14230 PF01266 FAD dependent oxidoreductase JC622_RS14235 PF00455 DeoR C terminal sensor domain JC622_RS14235 PF08220 DeoR-like helix-turn-helix domain JC622_RS14240 PF07690 Major Facilitator Superfamily JC622_RS14245 PF00230 Major intrinsic protein JC622_RS14250 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JC622_RS14250 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JC622_RS14255 PF02743 Cache domain JC622_RS14255 PF00672 HAMP domain JC622_RS14255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS14265 PF03466 LysR substrate binding domain JC622_RS14265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS14285 PF00248 Aldo/keto reductase family JC622_RS14295 PF07690 Major Facilitator Superfamily JC622_RS14300 PF02525 Flavodoxin-like fold JC622_RS14315 PF05114 Protein of unknown function (DUF692) JC622_RS14335 PF02322 Cytochrome bd terminal oxidase subunit II JC622_RS14340 PF01654 Cytochrome bd terminal oxidase subunit I JC622_RS14345 PF00392 Bacterial regulatory proteins, gntR family JC622_RS14345 PF00155 Aminotransferase class I and II JC622_RS14355 PF04391 Protein of unknown function (DUF533) JC622_RS14360 PF03061 Thioesterase superfamily JC622_RS14365 PF10689 Protein of unknown function (DUF2496) JC622_RS14370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS14370 PF03466 LysR substrate binding domain JC622_RS14375 PF07690 Major Facilitator Superfamily JC622_RS14380 PF00849 RNA pseudouridylate synthase JC622_RS14380 PF01479 S4 domain JC622_RS14410 PF01844 HNH endonuclease JC622_RS14415 PF02508 Rnf-Nqr subunit, membrane protein JC622_RS14420 PF04060 Putative Fe-S cluster JC622_RS14425 PF10531 SLBB domain JC622_RS14425 PF13375 RnfC Barrel sandwich hybrid domain JC622_RS14425 PF12838 4Fe-4S dicluster domain JC622_RS14425 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JC622_RS14430 PF03116 NQR2, RnfD, RnfE family JC622_RS14435 PF04205 FMN-binding domain JC622_RS14440 PF02508 Rnf-Nqr subunit, membrane protein JC622_RS14445 PF00633 Helix-hairpin-helix motif JC622_RS14445 PF10576 Iron-sulfur binding domain of endonuclease III JC622_RS14445 PF00730 HhH-GPD superfamily base excision DNA repair protein JC622_RS14450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC622_RS14455 PF18393 MotY N-terminal domain JC622_RS14455 PF00691 OmpA family JC622_RS14490 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 JC622_RS14490 PF13542 Helix-turn-helix domain of transposase family ISL3 JC622_RS14490 PF01610 Transposase JC622_RS14500 PF06733 DEAD_2 JC622_RS14500 PF13307 Helicase C-terminal domain JC622_RS14510 PF00850 Histone deacetylase domain JC622_RS14515 PF01926 50S ribosome-binding GTPase JC622_RS14520 PF00245 Alkaline phosphatase JC622_RS14525 PF00245 Alkaline phosphatase JC622_RS14540 PF01272 Transcription elongation factor, GreA/GreB, C-term JC622_RS14540 PF14760 Rnk N-terminus JC622_RS14545 PF00072 Response regulator receiver domain JC622_RS14545 PF00196 Bacterial regulatory proteins, luxR family JC622_RS14550 PF07730 Histidine kinase JC622_RS14550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS14550 PF05231 MASE1 JC622_RS14555 PF07690 Major Facilitator Superfamily JC622_RS14560 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS14560 PF08448 PAS fold JC622_RS14565 PF00872 Transposase, Mutator family JC622_RS14570 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC622_RS14575 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS14580 PF00005 ABC transporter JC622_RS14590 PF04116 Fatty acid hydroxylase superfamily JC622_RS14595 PF13520 Amino acid permease JC622_RS14600 PF02965 Vitamin B12 dependent methionine synthase, activation domain JC622_RS14600 PF02310 B12 binding domain JC622_RS14600 PF02574 Homocysteine S-methyltransferase JC622_RS14600 PF02607 B12 binding domain JC622_RS14600 PF00809 Pterin binding enzyme JC622_RS14610 PF00571 CBS domain JC622_RS14610 PF03471 Transporter associated domain JC622_RS14610 PF01595 Cyclin M transmembrane N-terminal domain JC622_RS14615 PF01895 PhoU domain JC622_RS14620 PF00005 ABC transporter JC622_RS14625 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS14630 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS14635 PF14437 MafB19-like deaminase JC622_RS14650 PF01274 Malate synthase JC622_RS14655 PF00463 Isocitrate lyase family JC622_RS14660 PF00308 Bacterial dnaA protein JC622_RS14675 PF00586 AIR synthase related protein, N-terminal domain JC622_RS14675 PF02769 AIR synthase related protein, C-terminal domain JC622_RS14680 PF00551 Formyl transferase JC622_RS14685 PF01784 NIF3 (NGG1p interacting factor 3) JC622_RS14690 PF00072 Response regulator receiver domain JC622_RS14690 PF02954 Bacterial regulatory protein, Fis family JC622_RS14690 PF00158 Sigma-54 interaction domain JC622_RS14695 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS14695 PF13188 PAS domain JC622_RS14695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS14700 PF06490 Flagellar regulatory protein FleQ JC622_RS14700 PF02954 Bacterial regulatory protein, Fis family JC622_RS14700 PF00158 Sigma-54 interaction domain JC622_RS14710 PF01842 ACT domain JC622_RS14715 PF17941 Polyphosphate kinase C-terminal domain 1 JC622_RS14715 PF02503 Polyphosphate kinase middle domain JC622_RS14715 PF13090 Polyphosphate kinase C-terminal domain 2 JC622_RS14715 PF13089 Polyphosphate kinase N-terminal domain JC622_RS14720 PF02541 Ppx/GppA phosphatase family JC622_RS14725 PF01769 Divalent cation transporter JC622_RS14725 PF03448 MgtE intracellular N domain JC622_RS14725 PF00571 CBS domain JC622_RS14730 PF00669 Bacterial flagellin N-terminal helical region JC622_RS14735 PF07196 Flagellin hook IN motif JC622_RS14735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JC622_RS14740 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JC622_RS14740 PF10135 Rod binding protein JC622_RS14745 PF02119 Flagellar P-ring protein JC622_RS14750 PF02107 Flagellar L-ring protein JC622_RS14755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JC622_RS14755 PF00460 Flagella basal body rod protein JC622_RS14760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JC622_RS14760 PF00460 Flagella basal body rod protein JC622_RS14765 PF07559 Flagellar basal body protein FlaE JC622_RS14765 PF00460 Flagella basal body rod protein JC622_RS14765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JC622_RS14770 PF13860 FlgD Ig-like domain JC622_RS14770 PF03963 Flagellar hook capping protein - N-terminal region JC622_RS14770 PF13861 FlgD Tudor-like domain JC622_RS14775 PF00460 Flagella basal body rod protein JC622_RS14775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JC622_RS14780 PF00460 Flagella basal body rod protein JC622_RS14785 PF01739 CheR methyltransferase, SAM binding domain JC622_RS14785 PF03705 CheR methyltransferase, all-alpha domain JC622_RS14790 PF01584 CheW-like domain JC622_RS14790 PF00072 Response regulator receiver domain JC622_RS14795 PF13144 Chaperone for flagella basal body P-ring formation JC622_RS14810 PF12850 Calcineurin-like phosphoesterase superfamily domain JC622_RS14815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC622_RS14825 PF00849 RNA pseudouridylate synthase JC622_RS14825 PF01479 S4 domain JC622_RS14830 PF01966 HD domain JC622_RS14840 PF00923 Transaldolase/Fructose-6-phosphate aldolase JC622_RS14845 PF04055 Radical SAM superfamily JC622_RS14850 PF01228 Glycine radical JC622_RS14850 PF02901 Pyruvate formate lyase-like JC622_RS14855 PF00455 DeoR C terminal sensor domain JC622_RS14855 PF08220 DeoR-like helix-turn-helix domain JC622_RS14860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC622_RS14885 PF00313 'Cold-shock' DNA-binding domain JC622_RS14890 PF02817 e3 binding domain JC622_RS14890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JC622_RS14890 PF00364 Biotin-requiring enzyme JC622_RS14895 PF02779 Transketolase, pyrimidine binding domain JC622_RS14895 PF02780 Transketolase, C-terminal domain JC622_RS14900 PF00676 Dehydrogenase E1 component JC622_RS14910 PF00501 AMP-binding enzyme JC622_RS14910 PF00668 Condensation domain JC622_RS14910 PF00550 Phosphopantetheine attachment site JC622_RS14910 PF00975 Thioesterase domain JC622_RS14920 PF00857 Isochorismatase family JC622_RS14920 PF00550 Phosphopantetheine attachment site JC622_RS14930 PF13193 AMP-binding enzyme C-terminal domain JC622_RS14930 PF00501 AMP-binding enzyme JC622_RS14935 PF00425 chorismate binding enzyme JC622_RS14940 PF00593 TonB dependent receptor JC622_RS14940 PF07715 TonB-dependent Receptor Plug Domain JC622_RS14945 PF00793 DAHP synthetase I family JC622_RS14950 PF00356 Bacterial regulatory proteins, lacI family JC622_RS14955 PF01464 Transglycosylase SLT domain JC622_RS14955 PF14718 Soluble lytic murein transglycosylase L domain JC622_RS14960 PF03707 Bacterial signalling protein N terminal repeat JC622_RS14960 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS14960 PF00563 EAL domain JC622_RS14965 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JC622_RS14980 PF04357 TamB, inner membrane protein subunit of TAM complex JC622_RS14985 PF07244 Surface antigen variable number repeat JC622_RS14985 PF17243 POTRA domain TamA domain 1 JC622_RS14985 PF01103 Surface antigen JC622_RS14995 PF05698 Bacterial trigger factor protein (TF) C-terminus JC622_RS15000 PF10137 Predicted nucleotide-binding protein containing TIR-like domain JC622_RS15015 PF02627 Carboxymuconolactone decarboxylase family JC622_RS15020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JC622_RS15020 PF00403 Heavy-metal-associated domain JC622_RS15020 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS15025 PF13416 Bacterial extracellular solute-binding protein JC622_RS15035 PF00005 ABC transporter JC622_RS15040 PF01066 CDP-alcohol phosphatidyltransferase JC622_RS15045 PF13406 Transglycosylase SLT domain JC622_RS15050 PF01047 MarR family JC622_RS15060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JC622_RS15060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JC622_RS15060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JC622_RS15060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JC622_RS15065 PF03925 SeqA protein C-terminal domain JC622_RS15065 PF17206 SeqA protein N-terminal domain JC622_RS15070 PF12697 Alpha/beta hydrolase family JC622_RS15080 PF01402 Ribbon-helix-helix protein, copG family JC622_RS15085 PF00258 Flavodoxin JC622_RS15095 PF01475 Ferric uptake regulator family JC622_RS15100 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JC622_RS15100 PF00749 tRNA synthetases class I (E and Q), catalytic domain JC622_RS15105 PF02838 Glycosyl hydrolase family 20, domain 2 JC622_RS15105 PF00728 Glycosyl hydrolase family 20, catalytic domain JC622_RS15105 PF03173 Putative carbohydrate binding domain JC622_RS15105 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain JC622_RS15110 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JC622_RS15110 PF02378 Phosphotransferase system, EIIC JC622_RS15110 PF00367 phosphotransferase system, EIIB JC622_RS15115 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JC622_RS15120 PF01979 Amidohydrolase family JC622_RS15125 PF01047 MarR family JC622_RS15125 PF00480 ROK family JC622_RS15130 PF00884 Sulfatase JC622_RS15130 PF08019 Phosphoethanolamine transferase EptA/EptB JC622_RS15135 PF01966 HD domain JC622_RS15140 PF07694 5TMR of 5TMR-LYT JC622_RS15140 PF06580 Histidine kinase JC622_RS15145 PF04397 LytTr DNA-binding domain JC622_RS15145 PF00072 Response regulator receiver domain JC622_RS15150 PF02554 Carbon starvation protein CstA JC622_RS15155 PF11742 Protein of unknown function (DUF3302) JC622_RS15160 PF00529 HlyD membrane-fusion protein of T1SS JC622_RS15160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JC622_RS15165 PF00271 Helicase conserved C-terminal domain JC622_RS15165 PF04851 Type III restriction enzyme, res subunit JC622_RS15170 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JC622_RS15175 PF00462 Glutaredoxin JC622_RS15180 PF03372 Endonuclease/Exonuclease/phosphatase family JC622_RS15190 PF03061 Thioesterase superfamily JC622_RS15195 PF01370 NAD dependent epimerase/dehydratase family JC622_RS15210 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JC622_RS15210 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JC622_RS15210 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JC622_RS15210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC622_RS15210 PF10371 Domain of unknown function JC622_RS15215 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JC622_RS15215 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS15215 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JC622_RS15225 PF00111 2Fe-2S iron-sulfur cluster binding domain JC622_RS15225 PF03473 MOSC domain JC622_RS15225 PF03476 MOSC N-terminal beta barrel domain JC622_RS15225 PF03473 MOSC domain JC622_RS15225 PF00111 2Fe-2S iron-sulfur cluster binding domain JC622_RS15225 PF03476 MOSC N-terminal beta barrel domain JC622_RS15230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS15230 PF08447 PAS fold JC622_RS15230 PF13426 PAS domain JC622_RS15235 PF01435 Peptidase family M48 JC622_RS15245 PF12697 Alpha/beta hydrolase family JC622_RS15245 PF08241 Methyltransferase domain JC622_RS15250 PF00155 Aminotransferase class I and II JC622_RS15255 PF06968 Biotin and Thiamin Synthesis associated domain JC622_RS15255 PF04055 Radical SAM superfamily JC622_RS15260 PF00202 Aminotransferase class-III JC622_RS15275 PF01336 OB-fold nucleic acid binding domain JC622_RS15275 PF00152 tRNA synthetases class II (D, K and N) JC622_RS15285 PF03605 Anaerobic c4-dicarboxylate membrane transporter JC622_RS15295 PF07687 Peptidase dimerisation domain JC622_RS15295 PF01546 Peptidase family M20/M25/M40 JC622_RS15300 PF03606 C4-dicarboxylate anaerobic carrier JC622_RS15310 PF03960 ArsC family JC622_RS15315 PF07687 Peptidase dimerisation domain JC622_RS15315 PF01546 Peptidase family M20/M25/M40 JC622_RS15320 PF02557 D-alanyl-D-alanine carboxypeptidase JC622_RS15330 PF03471 Transporter associated domain JC622_RS15330 PF00999 Sodium/hydrogen exchanger family JC622_RS15330 PF02080 TrkA-C domain JC622_RS15340 PF02080 TrkA-C domain JC622_RS15340 PF00999 Sodium/hydrogen exchanger family JC622_RS15340 PF03471 Transporter associated domain JC622_RS15345 PF01810 LysE type translocator JC622_RS15350 PF00672 HAMP domain JC622_RS15350 PF12729 Four helix bundle sensory module for signal transduction JC622_RS15350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS15355 PF07509 Protein of unknown function (DUF1523) JC622_RS15375 PF00849 RNA pseudouridylate synthase JC622_RS15380 PF01048 Phosphorylase superfamily JC622_RS15460 PF10124 Mu-like prophage major head subunit gpT JC622_RS15465 PF10123 Mu-like prophage I protein JC622_RS15485 PF06074 Protein of unknown function (DUF935) JC622_RS15490 PF03237 Terminase-like family JC622_RS15495 PF11985 Protein of unknown function (DUF3486) JC622_RS15500 PF08461 Ribonuclease R winged-helix domain JC622_RS15645 PF04355 SmpA / OmlA family JC622_RS15650 PF13460 NAD(P)H-binding JC622_RS15660 PF03099 Biotin/lipoate A/B protein ligase family JC622_RS15660 PF10437 Bacterial lipoate protein ligase C-terminus JC622_RS15670 PF00005 ABC transporter JC622_RS15670 PF02687 FtsX-like permease family JC622_RS15670 PF12704 MacB-like periplasmic core domain JC622_RS15675 PF12704 MacB-like periplasmic core domain JC622_RS15675 PF02687 FtsX-like permease family JC622_RS15675 PF00005 ABC transporter JC622_RS15680 PF00005 ABC transporter JC622_RS15680 PF02687 FtsX-like permease family JC622_RS15680 PF12704 MacB-like periplasmic core domain JC622_RS15685 PF00529 HlyD membrane-fusion protein of T1SS JC622_RS15685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JC622_RS15690 PF00873 AcrB/AcrD/AcrF family JC622_RS15705 PF04143 Sulphur transport JC622_RS15720 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS15730 PF02308 MgtC family JC622_RS15735 PF00356 Bacterial regulatory proteins, lacI family JC622_RS15735 PF13407 Periplasmic binding protein domain JC622_RS15740 PF08244 Glycosyl hydrolases family 32 C terminal JC622_RS15740 PF00251 Glycosyl hydrolases family 32 N-terminal domain JC622_RS15745 PF00367 phosphotransferase system, EIIB JC622_RS15745 PF02378 Phosphotransferase system, EIIC JC622_RS15750 PF00294 pfkB family carbohydrate kinase JC622_RS15755 PF11471 Maltoporin periplasmic N-terminal extension JC622_RS15755 PF02264 LamB porin JC622_RS15760 PF00684 DnaJ central domain JC622_RS15760 PF00226 DnaJ domain JC622_RS15760 PF01556 DnaJ C terminal domain JC622_RS15765 PF00012 Hsp70 protein JC622_RS15770 PF01025 GrpE JC622_RS15775 PF01513 ATP-NAD kinase JC622_RS15780 PF02463 RecF/RecN/SMC N terminal domain JC622_RS15785 PF02833 DHHA2 domain JC622_RS15785 PF01368 DHH family JC622_RS15790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JC622_RS15795 PF00005 ABC transporter JC622_RS15795 PF02687 FtsX-like permease family JC622_RS15795 PF12704 MacB-like periplasmic core domain JC622_RS15805 PF00816 H-NS histone family JC622_RS15825 PF02397 Bacterial sugar transferase JC622_RS15835 PF13439 Glycosyltransferase Family 4 JC622_RS15835 PF00534 Glycosyl transferases group 1 JC622_RS15840 PF00534 Glycosyl transferases group 1 JC622_RS15840 PF13439 Glycosyltransferase Family 4 JC622_RS15845 PF00535 Glycosyl transferase family 2 JC622_RS15855 PF13737 Transposase DDE domain JC622_RS15860 PF02719 Polysaccharide biosynthesis protein JC622_RS15865 PF00953 Glycosyl transferase family 4 JC622_RS15870 PF01370 NAD dependent epimerase/dehydratase family JC622_RS15880 PF13808 DDE_Tnp_1-associated JC622_RS15880 PF01609 Transposase DDE domain JC622_RS15890 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JC622_RS15905 PF00483 Nucleotidyl transferase JC622_RS15910 PF04321 RmlD substrate binding domain JC622_RS15915 PF16363 GDP-mannose 4,6 dehydratase JC622_RS15920 PF00873 AcrB/AcrD/AcrF family JC622_RS15925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JC622_RS15925 PF00529 HlyD membrane-fusion protein of T1SS JC622_RS15930 PF00440 Bacterial regulatory proteins, tetR family JC622_RS15930 PF08361 MAATS-type transcriptional repressor, C-terminal region JC622_RS15945 PF02001 Protein of unknown function DUF134 JC622_RS15960 PF00072 Response regulator receiver domain JC622_RS15965 PF04055 Radical SAM superfamily JC622_RS15965 PF18693 TRAM domain JC622_RS15965 PF00919 Uncharacterized protein family UPF0004 JC622_RS15990 PF01048 Phosphorylase superfamily JC622_RS16015 PF00210 Ferritin-like domain JC622_RS16045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC622_RS16045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC622_RS16045 PF02378 Phosphotransferase system, EIIC JC622_RS16050 PF07690 Major Facilitator Superfamily JC622_RS16055 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC622_RS16065 PF00849 RNA pseudouridylate synthase JC622_RS16070 PF00293 NUDIX domain JC622_RS16080 PF04356 Protein of unknown function (DUF489) JC622_RS16085 PF08328 Adenylosuccinate lyase C-terminal JC622_RS16085 PF00206 Lyase JC622_RS16090 PF08007 Cupin superfamily protein JC622_RS16105 PF13417 Glutathione S-transferase, N-terminal domain JC622_RS16110 PF01243 Pyridoxamine 5'-phosphate oxidase JC622_RS16110 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JC622_RS16145 PF01029 NusB family JC622_RS16145 PF01189 16S rRNA methyltransferase RsmB/F JC622_RS16150 PF01042 Endoribonuclease L-PSP JC622_RS16155 PF01228 Glycine radical JC622_RS16155 PF02901 Pyruvate formate lyase-like JC622_RS16160 PF00871 Acetokinase family JC622_RS16165 PF03222 Tryptophan/tyrosine permease family JC622_RS16170 PF00291 Pyridoxal-phosphate dependent enzyme JC622_RS16175 PF00462 Glutaredoxin JC622_RS16180 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JC622_RS16180 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JC622_RS16185 PF04333 MlaA lipoprotein JC622_RS16195 PF03918 Cytochrome C biogenesis protein JC622_RS16200 PF08534 Redoxin JC622_RS16205 PF01578 Cytochrome C assembly protein JC622_RS16205 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JC622_RS16210 PF03100 CcmE JC622_RS16215 PF04995 Heme exporter protein D (CcmD) JC622_RS16220 PF01578 Cytochrome C assembly protein JC622_RS16225 PF03379 CcmB protein JC622_RS16230 PF00005 ABC transporter JC622_RS16240 PF01584 CheW-like domain JC622_RS16250 PF13614 AAA domain JC622_RS16255 PF13677 Membrane MotB of proton-channel complex MotA/MotB JC622_RS16255 PF00691 OmpA family JC622_RS16260 PF01618 MotA/TolQ/ExbB proton channel family JC622_RS16265 PF01339 CheB methylesterase JC622_RS16265 PF00072 Response regulator receiver domain JC622_RS16270 PF01584 CheW-like domain JC622_RS16270 PF02895 Signal transducing histidine kinase, homodimeric domain JC622_RS16270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS16270 PF01627 Hpt domain JC622_RS16270 PF00072 Response regulator receiver domain JC622_RS16275 PF04344 Chemotaxis phosphatase, CheZ JC622_RS16280 PF00072 Response regulator receiver domain JC622_RS16285 PF04545 Sigma-70, region 4 JC622_RS16285 PF04542 Sigma-70 region 2 JC622_RS16285 PF04539 Sigma-70 region 3 JC622_RS16290 PF10609 NUBPL iron-transfer P-loop NTPase JC622_RS16295 PF00448 SRP54-type protein, GTPase domain JC622_RS16300 PF00771 FHIPEP family JC622_RS16305 PF01312 FlhB HrpN YscU SpaS Family JC622_RS16310 PF01311 Bacterial export proteins, family 1 JC622_RS16315 PF01313 Bacterial export proteins, family 3 JC622_RS16320 PF00813 FliP family JC622_RS16325 PF04347 Flagellar biosynthesis protein, FliO JC622_RS16330 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JC622_RS16335 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JC622_RS16335 PF02154 Flagellar motor switch protein FliM JC622_RS16355 PF18269 T3SS EscN ATPase C-terminal domain JC622_RS16355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JC622_RS16365 PF14842 FliG N-terminal domain JC622_RS16365 PF14841 FliG middle domain JC622_RS16365 PF01706 FliG C-terminal domain JC622_RS16370 PF08345 Flagellar M-ring protein C-terminal JC622_RS16370 PF01514 Secretory protein of YscJ/FliF family JC622_RS16375 PF02049 Flagellar hook-basal body complex protein FliE JC622_RS16385 PF07969 Amidohydrolase family JC622_RS16395 PF00224 Pyruvate kinase, barrel domain JC622_RS16395 PF02887 Pyruvate kinase, alpha/beta domain JC622_RS16400 PF01380 SIS domain JC622_RS16400 PF01418 Helix-turn-helix domain, rpiR family JC622_RS16430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS16430 PF00672 HAMP domain JC622_RS16435 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC622_RS16440 PF00860 Permease family JC622_RS16450 PF16998 17 kDa outer membrane surface antigen JC622_RS16450 PF05433 Glycine zipper 2TM domain JC622_RS16455 PF03949 Malic enzyme, NAD binding domain JC622_RS16455 PF00390 Malic enzyme, N-terminal domain JC622_RS16475 PF13247 4Fe-4S dicluster domain JC622_RS16480 PF12838 4Fe-4S dicluster domain JC622_RS16480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JC622_RS16480 PF00384 Molybdopterin oxidoreductase JC622_RS16480 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JC622_RS16480 PF12838 4Fe-4S dicluster domain JC622_RS16480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JC622_RS16480 PF00384 Molybdopterin oxidoreductase JC622_RS16480 PF01568 Molydopterin dinucleotide binding domain JC622_RS16480 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JC622_RS16480 PF01568 Molydopterin dinucleotide binding domain JC622_RS16520 PF02634 FdhD/NarQ family JC622_RS16530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS16530 PF00989 PAS fold JC622_RS16530 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS16535 PF00072 Response regulator receiver domain JC622_RS16535 PF02954 Bacterial regulatory protein, Fis family JC622_RS16535 PF00158 Sigma-54 interaction domain JC622_RS16540 PF12849 PBP superfamily domain JC622_RS16545 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS16550 PF00005 ABC transporter JC622_RS16555 PF12804 MobA-like NTP transferase domain JC622_RS16560 PF03453 MoeA N-terminal region (domain I and II) JC622_RS16560 PF03454 MoeA C-terminal region (domain IV) JC622_RS16560 PF00994 Probable molybdopterin binding domain JC622_RS16565 PF04632 Fusaric acid resistance protein family JC622_RS16575 PF08447 PAS fold JC622_RS16575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS16575 PF13426 PAS domain JC622_RS16595 PF05114 Protein of unknown function (DUF692) JC622_RS16605 PF10725 Protein of unknown function (DUF2517) JC622_RS16625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS16625 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS16625 PF09308 LuxQ, periplasmic JC622_RS16625 PF00072 Response regulator receiver domain JC622_RS16630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC622_RS16635 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS16640 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS16640 PF12911 N-terminal TM domain of oligopeptide transport permease C JC622_RS16645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC622_RS16645 PF00005 ABC transporter JC622_RS16650 PF00005 ABC transporter JC622_RS16650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC622_RS16660 PF01869 BadF/BadG/BcrA/BcrD ATPase family JC622_RS16665 PF00728 Glycosyl hydrolase family 20, catalytic domain JC622_RS16665 PF02838 Glycosyl hydrolase family 20, domain 2 JC622_RS16670 PF08447 PAS fold JC622_RS16670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS16685 PF08272 Topoisomerase I zinc-ribbon-like JC622_RS16685 PF01131 DNA topoisomerase JC622_RS16685 PF01751 Toprim domain JC622_RS16685 PF01396 Topoisomerase DNA binding C4 zinc finger JC622_RS16690 PF04996 Succinylarginine dihydrolase JC622_RS16715 PF01627 Hpt domain JC622_RS16715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JC622_RS16715 PF00072 Response regulator receiver domain JC622_RS16715 PF00672 HAMP domain JC622_RS16715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS16715 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS16720 PF00072 Response regulator receiver domain JC622_RS16720 PF00196 Bacterial regulatory proteins, luxR family JC622_RS16730 PF16967 E-set like domain JC622_RS16730 PF15976 CS1-pili formation C-terminal JC622_RS16745 PF00989 PAS fold JC622_RS16745 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS16745 PF01590 GAF domain JC622_RS16745 PF00563 EAL domain JC622_RS16750 PF01136 Peptidase family U32 JC622_RS16750 PF16325 Peptidase family U32 C-terminal domain JC622_RS16755 PF12838 4Fe-4S dicluster domain JC622_RS16765 PF02635 DsrE/DsrF-like family JC622_RS16770 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS16775 PF07690 Major Facilitator Superfamily JC622_RS16780 PF08496 Peptidase family S49 N-terminal JC622_RS16780 PF01343 Peptidase family S49 JC622_RS16785 PF00106 short chain dehydrogenase JC622_RS16790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS16790 PF03466 LysR substrate binding domain JC622_RS16795 PF07690 Major Facilitator Superfamily JC622_RS16800 PF00155 Aminotransferase class I and II JC622_RS16815 PF00709 Adenylosuccinate synthetase JC622_RS16820 PF01161 Phosphatidylethanolamine-binding protein JC622_RS16830 PF01204 Trehalase JC622_RS16840 PF03167 Uracil DNA glycosylase superfamily JC622_RS16850 PF01228 Glycine radical JC622_RS16855 PF00793 DAHP synthetase I family JC622_RS16860 PF13369 Transglutaminase-like superfamily JC622_RS16870 PF17827 PrmC N-terminal domain JC622_RS16870 PF13847 Methyltransferase domain JC622_RS16875 PF00472 RF-1 domain JC622_RS16875 PF03462 PCRF domain JC622_RS16880 PF01488 Shikimate / quinate 5-dehydrogenase JC622_RS16880 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JC622_RS16880 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JC622_RS16885 PF03550 Outer membrane lipoprotein LolB JC622_RS16890 PF00288 GHMP kinases N terminal domain JC622_RS16890 PF08544 GHMP kinases C terminal JC622_RS16900 PF14572 Phosphoribosyl synthetase-associated domain JC622_RS16900 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JC622_RS16905 PF02872 5'-nucleotidase, C-terminal domain JC622_RS16905 PF00149 Calcineurin-like phosphoesterase JC622_RS16910 PF01195 Peptidyl-tRNA hydrolase JC622_RS16915 PF01926 50S ribosome-binding GTPase JC622_RS16915 PF06071 Protein of unknown function (DUF933) JC622_RS16925 PF09588 YqaJ-like viral recombinase domain JC622_RS16965 PF04002 RadC-like JAB domain JC622_RS17010 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A JC622_RS17015 PF04471 Restriction endonuclease JC622_RS17015 PF14338 Mrr N-terminal domain JC622_RS17025 PF18766 SWI2/SNF2 ATPase JC622_RS17025 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JC622_RS17025 PF11867 Domain of unknown function (DUF3387) JC622_RS17040 PF01420 Type I restriction modification DNA specificity domain JC622_RS17050 PF02384 N-6 DNA Methylase JC622_RS17050 PF12161 HsdM N-terminal domain JC622_RS17065 PF01609 Transposase DDE domain JC622_RS17075 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 JC622_RS17075 PF13542 Helix-turn-helix domain of transposase family ISL3 JC622_RS17075 PF01610 Transposase JC622_RS17080 PF01609 Transposase DDE domain JC622_RS17085 PF08240 Alcohol dehydrogenase GroES-like domain JC622_RS17085 PF00107 Zinc-binding dehydrogenase JC622_RS17095 PF01625 Peptide methionine sulfoxide reductase JC622_RS17100 PF00108 Thiolase, N-terminal domain JC622_RS17100 PF02803 Thiolase, C-terminal domain JC622_RS17115 PF01641 SelR domain JC622_RS17145 PF02798 Glutathione S-transferase, N-terminal domain JC622_RS17145 PF00043 Glutathione S-transferase, C-terminal domain JC622_RS17150 PF01625 Peptide methionine sulfoxide reductase JC622_RS17155 PF01641 SelR domain JC622_RS17160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS17160 PF03466 LysR substrate binding domain JC622_RS17170 PF01625 Peptide methionine sulfoxide reductase JC622_RS17205 PF01047 MarR family JC622_RS17210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS17210 PF03466 LysR substrate binding domain JC622_RS17220 PF03743 Bacterial conjugation TrbI-like protein JC622_RS17235 PF02371 Transposase IS116/IS110/IS902 family JC622_RS17235 PF01548 Transposase JC622_RS17240 PF00239 Resolvase, N terminal domain JC622_RS17240 PF02796 Helix-turn-helix domain of resolvase JC622_RS17285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS17285 PF03466 LysR substrate binding domain JC622_RS17290 PF06628 Catalase-related immune-responsive JC622_RS17290 PF00199 Catalase JC622_RS17300 PF00239 Resolvase, N terminal domain JC622_RS17300 PF02796 Helix-turn-helix domain of resolvase JC622_RS17325 PF01526 Tn3 transposase DDE domain JC622_RS17325 PF13700 Domain of unknown function (DUF4158) JC622_RS17330 PF01548 Transposase JC622_RS17330 PF02371 Transposase IS116/IS110/IS902 family JC622_RS17340 PF01695 IstB-like ATP binding protein JC622_RS17345 PF00665 Integrase core domain JC622_RS17365 PF00953 Glycosyl transferase family 4 JC622_RS17370 PF01370 NAD dependent epimerase/dehydratase family JC622_RS17385 PF02350 UDP-N-acetylglucosamine 2-epimerase JC622_RS17400 PF05045 Rhamnan synthesis protein F JC622_RS17400 PF14307 Glycosyltransferase WbsX JC622_RS17410 PF00005 ABC transporter JC622_RS17415 PF01061 ABC-2 type transporter JC622_RS17420 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JC622_RS17425 PF00483 Nucleotidyl transferase JC622_RS17430 PF04321 RmlD substrate binding domain JC622_RS17435 PF16363 GDP-mannose 4,6 dehydratase JC622_RS17440 PF13737 Transposase DDE domain JC622_RS17475 PF00872 Transposase, Mutator family JC622_RS17480 PF13737 Transposase DDE domain JC622_RS17525 PF03600 Citrate transporter JC622_RS17525 PF02080 TrkA-C domain JC622_RS17530 PF04973 Nicotinamide mononucleotide transporter JC622_RS17535 PF01048 Phosphorylase superfamily JC622_RS17545 PF04266 ASCH domain JC622_RS17555 PF00128 Alpha amylase, catalytic domain JC622_RS17555 PF16657 Maltogenic Amylase, C-terminal domain JC622_RS17560 PF10371 Domain of unknown function JC622_RS17560 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JC622_RS17560 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JC622_RS17560 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JC622_RS17560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC622_RS17565 PF07690 Major Facilitator Superfamily JC622_RS17570 PF13419 Haloacid dehalogenase-like hydrolase JC622_RS17585 PF00171 Aldehyde dehydrogenase family JC622_RS17590 PF04958 Arginine N-succinyltransferase beta subunit JC622_RS17595 PF00202 Aminotransferase class-III JC622_RS17600 PF00117 Glutamine amidotransferase class-I JC622_RS17610 PF00579 tRNA synthetases class I (W and Y) JC622_RS17615 PF13419 Haloacid dehalogenase-like hydrolase JC622_RS17620 PF00834 Ribulose-phosphate 3 epimerase family JC622_RS17625 PF02086 D12 class N6 adenine-specific DNA methyltransferase JC622_RS17635 PF01761 3-dehydroquinate synthase JC622_RS17640 PF01202 Shikimate kinase JC622_RS17645 PF00263 Bacterial type II and III secretion system protein JC622_RS17645 PF11741 AMIN domain JC622_RS17645 PF03958 Bacterial type II/III secretion system short domain JC622_RS17645 PF07660 Secretin and TonB N terminus short domain JC622_RS17665 PF11104 Type IV pilus assembly protein PilM; JC622_RS17670 PF00905 Penicillin binding protein transpeptidase domain JC622_RS17670 PF00912 Transglycosylase JC622_RS17670 PF17092 Penicillin-binding protein OB-like domain JC622_RS17675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS17675 PF03466 LysR substrate binding domain JC622_RS17695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS17695 PF03466 LysR substrate binding domain JC622_RS17705 PF01551 Peptidase family M23 JC622_RS17705 PF08525 Opacity-associated protein A N-terminal motif JC622_RS17705 PF01476 LysM domain JC622_RS17715 PF12795 Mechanosensitive ion channel porin domain JC622_RS17715 PF00924 Mechanosensitive ion channel JC622_RS17715 PF12794 Mechanosensitive ion channel inner membrane domain 1 JC622_RS17720 PF03009 Glycerophosphoryl diester phosphodiesterase family JC622_RS17725 PF00672 HAMP domain JC622_RS17725 PF02743 Cache domain JC622_RS17725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS17730 PF02910 Fumarate reductase flavoprotein C-term JC622_RS17730 PF00890 FAD binding domain JC622_RS17735 PF13085 2Fe-2S iron-sulfur cluster binding domain JC622_RS17735 PF13183 4Fe-4S dicluster domain JC622_RS17740 PF02300 Fumarate reductase subunit C JC622_RS17745 PF02313 Fumarate reductase subunit D JC622_RS17750 PF07670 Nucleoside recognition JC622_RS17755 PF07670 Nucleoside recognition JC622_RS17760 PF07687 Peptidase dimerisation domain JC622_RS17760 PF01546 Peptidase family M20/M25/M40 JC622_RS17770 PF06224 Winged helix DNA-binding domain JC622_RS17775 PF17932 Tetracyclin repressor-like, C-terminal domain JC622_RS17775 PF00440 Bacterial regulatory proteins, tetR family JC622_RS17785 PF01266 FAD dependent oxidoreductase JC622_RS17800 PF00501 AMP-binding enzyme JC622_RS17810 PF00106 short chain dehydrogenase JC622_RS17820 PF00072 Response regulator receiver domain JC622_RS17820 PF00486 Transcriptional regulatory protein, C terminal JC622_RS17825 PF08521 Two-component sensor kinase N-terminal JC622_RS17825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS17825 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS17835 PF00478 IMP dehydrogenase / GMP reductase domain JC622_RS17845 PF01132 Elongation factor P (EF-P) OB domain JC622_RS17845 PF09285 Elongation factor P, C-terminal JC622_RS17845 PF08207 Elongation factor P (EF-P) KOW-like domain JC622_RS17855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JC622_RS17855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JC622_RS17865 PF00563 EAL domain JC622_RS17865 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS17865 PF05231 MASE1 JC622_RS17865 PF08447 PAS fold JC622_RS17865 PF08448 PAS fold JC622_RS17865 PF13426 PAS domain JC622_RS17875 PF03466 LysR substrate binding domain JC622_RS17875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS17880 PF01979 Amidohydrolase family JC622_RS17880 PF13382 Adenine deaminase C-terminal domain JC622_RS17885 PF01156 Inosine-uridine preferring nucleoside hydrolase JC622_RS17890 PF03606 C4-dicarboxylate anaerobic carrier JC622_RS17895 PF13419 Haloacid dehalogenase-like hydrolase JC622_RS17905 PF03466 LysR substrate binding domain JC622_RS17905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS17910 PF05230 MASE2 domain JC622_RS17910 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS17915 PF00313 'Cold-shock' DNA-binding domain JC622_RS17920 PF00857 Isochorismatase family JC622_RS17935 PF01494 FAD binding domain JC622_RS17940 PF04055 Radical SAM superfamily JC622_RS17940 PF01938 TRAM domain JC622_RS17940 PF00919 Uncharacterized protein family UPF0004 JC622_RS17945 PF02562 PhoH-like protein JC622_RS17950 PF02130 Uncharacterized protein family UPF0054 JC622_RS17955 PF03471 Transporter associated domain JC622_RS17955 PF00571 CBS domain JC622_RS17960 PF00795 Carbon-nitrogen hydrolase JC622_RS17965 PF13411 MerR HTH family regulatory protein JC622_RS17970 PF02272 DHHA1 domain JC622_RS17970 PF17768 RecJ OB domain JC622_RS17970 PF01368 DHH family JC622_RS17980 PF01741 Large-conductance mechanosensitive channel, MscL JC622_RS17985 PF02899 Phage integrase, N-terminal SAM-like domain JC622_RS17985 PF00589 Phage integrase family JC622_RS17990 PF00258 Flavodoxin JC622_RS17995 PF01523 Putative modulator of DNA gyrase JC622_RS18000 PF01523 Putative modulator of DNA gyrase JC622_RS18005 PF07295 Zinc-ribbon containing domain JC622_RS18010 PF08264 Anticodon-binding domain of tRNA JC622_RS18010 PF13603 Leucyl-tRNA synthetase, Domain 2 JC622_RS18010 PF00133 tRNA synthetases class I (I, L, M and V) JC622_RS18025 PF01467 Cytidylyltransferase-like JC622_RS18035 PF02590 Predicted SPOUT methyltransferase JC622_RS18040 PF03717 Penicillin-binding Protein dimerisation domain JC622_RS18040 PF00905 Penicillin binding protein transpeptidase domain JC622_RS18045 PF01098 Cell cycle protein JC622_RS18050 PF13406 Transglycosylase SLT domain JC622_RS18055 PF03330 Lytic transglycolase JC622_RS18055 PF05036 Sporulation related domain JC622_RS18060 PF00768 D-alanyl-D-alanine carboxypeptidase JC622_RS18060 PF07943 Penicillin-binding protein 5, C-terminal domain JC622_RS18065 PF04359 Protein of unknown function (DUF493) JC622_RS18070 PF03099 Biotin/lipoate A/B protein ligase family JC622_RS18075 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JC622_RS18075 PF04055 Radical SAM superfamily JC622_RS18090 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JC622_RS18090 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JC622_RS18095 PF07023 Protein of unknown function (DUF1315) JC622_RS18100 PF00710 Asparaginase, N-terminal JC622_RS18100 PF17763 Glutaminase/Asparaginase C-terminal domain JC622_RS18105 PF03616 Sodium/glutamate symporter JC622_RS18110 PF00672 HAMP domain JC622_RS18110 PF02743 Cache domain JC622_RS18110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS18120 PF00152 tRNA synthetases class II (D, K and N) JC622_RS18120 PF01336 OB-fold nucleic acid binding domain JC622_RS18125 PF00258 Flavodoxin JC622_RS18125 PF00175 Oxidoreductase NAD-binding domain JC622_RS18125 PF00667 FAD binding domain JC622_RS18130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JC622_RS18130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JC622_RS18135 PF01507 Phosphoadenosine phosphosulfate reductase family JC622_RS18140 PF00186 Dihydrofolate reductase JC622_RS18145 PF12821 Threonine/Serine exporter, ThrE JC622_RS18150 PF06738 Putative threonine/serine exporter JC622_RS18160 PF00994 Probable molybdopterin binding domain JC622_RS18170 PF06004 Bacterial protein of unknown function (DUF903) JC622_RS18175 PF00581 Rhodanese-like domain JC622_RS18180 PF04960 Glutaminase JC622_RS18185 PF04320 Protein with unknown function (DUF469) JC622_RS18190 PF02390 Putative methyltransferase JC622_RS18195 PF00155 Aminotransferase class I and II JC622_RS18200 PF00563 EAL domain JC622_RS18200 PF12792 CSS motif domain associated with EAL JC622_RS18205 PF01370 NAD dependent epimerase/dehydratase family JC622_RS18205 PF08338 Domain of unknown function (DUF1731) JC622_RS18215 PF00005 ABC transporter JC622_RS18220 PF13472 GDSL-like Lipase/Acylhydrolase family JC622_RS18225 PF01584 CheW-like domain JC622_RS18225 PF00072 Response regulator receiver domain JC622_RS18230 PF06483 Chitinase C JC622_RS18230 PF00704 Glycosyl hydrolases family 18 JC622_RS18265 PF18416 N-acetylglucosamine binding protein domain 2 JC622_RS18265 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JC622_RS18270 PF17945 Beta/Gamma crystallin JC622_RS18270 PF12561 ToxR activated gene A lipoprotein domain JC622_RS18275 PF00704 Glycosyl hydrolases family 18 JC622_RS18275 PF08329 Chitinase A, N-terminal domain JC622_RS18280 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS18280 PF08448 PAS fold JC622_RS18285 PF08329 Chitinase A, N-terminal domain JC622_RS18285 PF00704 Glycosyl hydrolases family 18 JC622_RS18290 PF00672 HAMP domain JC622_RS18290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS18290 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS18290 PF01627 Hpt domain JC622_RS18290 PF00072 Response regulator receiver domain JC622_RS18290 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JC622_RS18300 PF13443 Cro/C1-type HTH DNA-binding domain JC622_RS18310 PF12832 MFS_1 like family JC622_RS18315 PF00593 TonB dependent receptor JC622_RS18315 PF07715 TonB-dependent Receptor Plug Domain JC622_RS18335 PF01243 Pyridoxamine 5'-phosphate oxidase JC622_RS18340 PF06228 Haem utilisation ChuX/HutX JC622_RS18350 PF01032 FecCD transport family JC622_RS18355 PF00005 ABC transporter JC622_RS18365 PF06580 Histidine kinase JC622_RS18365 PF07694 5TMR of 5TMR-LYT JC622_RS18370 PF04397 LytTr DNA-binding domain JC622_RS18370 PF00072 Response regulator receiver domain JC622_RS18375 PF02554 Carbon starvation protein CstA JC622_RS18375 PF13722 5TM C-terminal transporter carbon starvation CstA JC622_RS18380 PF03575 Peptidase family S51 JC622_RS18385 PF01894 Uncharacterised protein family UPF0047 JC622_RS18390 PF01168 Alanine racemase, N-terminal domain JC622_RS18390 PF00842 Alanine racemase, C-terminal domain JC622_RS18395 PF00772 DnaB-like helicase N terminal domain JC622_RS18395 PF03796 DnaB-like helicase C terminal domain JC622_RS18405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JC622_RS18410 PF09526 Probable metal-binding protein (DUF2387) JC622_RS18420 PF00072 Response regulator receiver domain JC622_RS18420 PF01584 CheW-like domain JC622_RS18435 PF00561 alpha/beta hydrolase fold JC622_RS18440 PF00360 Phytochrome region JC622_RS18440 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS18440 PF01590 GAF domain JC622_RS18440 PF00563 EAL domain JC622_RS18445 PF06794 Uncharacterised protein family (UPF0270) JC622_RS18450 PF00485 Phosphoribulokinase / Uridine kinase family JC622_RS18465 PF02566 OsmC-like protein JC622_RS18470 PF00027 Cyclic nucleotide-binding domain JC622_RS18470 PF13545 Crp-like helix-turn-helix domain JC622_RS18475 PF08241 Methyltransferase domain JC622_RS18480 PF00267 Gram-negative porin JC622_RS18490 PF00582 Universal stress protein family JC622_RS18505 PF00294 pfkB family carbohydrate kinase JC622_RS18510 PF04227 Indigoidine synthase A like protein JC622_RS18515 PF00194 Eukaryotic-type carbonic anhydrase JC622_RS18520 PF00561 alpha/beta hydrolase fold JC622_RS18535 PF06877 Regulator of ribonuclease activity B JC622_RS18540 PF03707 Bacterial signalling protein N terminal repeat JC622_RS18540 PF00563 EAL domain JC622_RS18540 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS18560 PF02080 TrkA-C domain JC622_RS18560 PF06826 Predicted Permease Membrane Region JC622_RS18565 PF03006 Haemolysin-III related JC622_RS18570 PF00282 Pyridoxal-dependent decarboxylase conserved domain JC622_RS18575 PF04279 Intracellular septation protein A JC622_RS18580 PF03795 YCII-related domain JC622_RS18585 PF00459 Inositol monophosphatase family JC622_RS18590 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JC622_RS18595 PF02565 Recombination protein O C terminal JC622_RS18595 PF11967 Recombination protein O N terminal JC622_RS18600 PF01926 50S ribosome-binding GTPase JC622_RS18600 PF07650 KH domain JC622_RS18605 PF00035 Double-stranded RNA binding motif JC622_RS18605 PF14622 Ribonuclease-III-like JC622_RS18610 PF10502 Signal peptidase, peptidase S26 JC622_RS18615 PF06421 GTP-binding protein LepA C-terminus JC622_RS18615 PF00679 Elongation factor G C-terminus JC622_RS18615 PF00009 Elongation factor Tu GTP binding domain JC622_RS18615 PF03144 Elongation factor Tu domain 2 JC622_RS18625 PF17188 MucB/RseB C-terminal domain JC622_RS18625 PF03888 MucB/RseB N-terminal domain JC622_RS18630 PF03873 Anti sigma-E protein RseA, C-terminal domain JC622_RS18630 PF03872 Anti sigma-E protein RseA, N-terminal domain JC622_RS18635 PF04542 Sigma-70 region 2 JC622_RS18635 PF08281 Sigma-70, region 4 JC622_RS18640 PF00890 FAD binding domain JC622_RS18640 PF02910 Fumarate reductase flavoprotein C-term JC622_RS18650 PF03937 Flavinator of succinate dehydrogenase JC622_RS18655 PF01571 Aminomethyltransferase folate-binding domain JC622_RS18660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS18660 PF03466 LysR substrate binding domain JC622_RS18675 PF03091 CutA1 divalent ion tolerance protein JC622_RS18680 PF11412 Disulphide bond corrector protein DsbC JC622_RS18680 PF02683 Cytochrome C biogenesis protein transmembrane region JC622_RS18695 PF01266 FAD dependent oxidoreductase JC622_RS18700 PF01116 Fructose-bisphosphate aldolase class-II JC622_RS18705 PF00162 Phosphoglycerate kinase JC622_RS18710 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JC622_RS18710 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JC622_RS18715 PF00480 ROK family JC622_RS18720 PF01208 Uroporphyrinogen decarboxylase (URO-D) JC622_RS18725 PF09297 NADH pyrophosphatase zinc ribbon domain JC622_RS18725 PF00293 NUDIX domain JC622_RS18730 PF01619 Proline dehydrogenase JC622_RS18730 PF00171 Aldehyde dehydrogenase family JC622_RS18730 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JC622_RS18730 PF14850 DNA-binding domain of Proline dehydrogenase JC622_RS18735 PF08239 Bacterial SH3 domain JC622_RS18740 PF00027 Cyclic nucleotide-binding domain JC622_RS18740 PF00520 Ion transport protein JC622_RS18745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS18745 PF00672 HAMP domain JC622_RS18750 PF03710 Glutamate-ammonia ligase adenylyltransferase JC622_RS18750 PF08335 GlnD PII-uridylyltransferase JC622_RS18760 PF00872 Transposase, Mutator family JC622_RS18780 PF00072 Response regulator receiver domain JC622_RS18780 PF00486 Transcriptional regulatory protein, C terminal JC622_RS18785 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS18785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS18795 PF00293 NUDIX domain JC622_RS18795 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain JC622_RS18795 PF09297 NADH pyrophosphatase zinc ribbon domain JC622_RS18820 PF03060 Nitronate monooxygenase JC622_RS18825 PF00445 Ribonuclease T2 family JC622_RS18835 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase JC622_RS18845 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS18850 PF00270 DEAD/DEAH box helicase JC622_RS18850 PF00271 Helicase conserved C-terminal domain JC622_RS18860 PF00753 Metallo-beta-lactamase superfamily JC622_RS18880 PF01425 Amidase JC622_RS18885 PF04371 Porphyromonas-type peptidyl-arginine deiminase JC622_RS18890 PF03466 LysR substrate binding domain JC622_RS18890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS18900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JC622_RS18905 PF00140 Sigma-70 factor, region 1.2 JC622_RS18905 PF04542 Sigma-70 region 2 JC622_RS18905 PF04539 Sigma-70 region 3 JC622_RS18905 PF04545 Sigma-70, region 4 JC622_RS18910 PF01476 LysM domain JC622_RS18910 PF01551 Peptidase family M23 JC622_RS18915 PF09335 SNARE associated Golgi protein JC622_RS18925 PF01975 Survival protein SurE JC622_RS18930 PF01142 tRNA pseudouridine synthase D (TruD) JC622_RS18935 PF02542 YgbB family JC622_RS18940 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JC622_RS18945 PF04977 Septum formation initiator JC622_RS18950 PF00474 Sodium:solute symporter family JC622_RS18960 PF03734 L,D-transpeptidase catalytic domain JC622_RS18960 PF17969 L,D-transpeptidase C-terminal domain JC622_RS18965 PF00924 Mechanosensitive ion channel JC622_RS18970 PF00871 Acetokinase family JC622_RS18975 PF04074 YhcH/YjgK/YiaL JC622_RS18985 PF01177 Asp/Glu/Hydantoin racemase JC622_RS18990 PF01810 LysE type translocator JC622_RS19000 PF00155 Aminotransferase class I and II JC622_RS19000 PF00392 Bacterial regulatory proteins, gntR family JC622_RS19015 PF01368 DHH family JC622_RS19015 PF02272 DHHA1 domain JC622_RS19015 PF01743 Poly A polymerase head domain JC622_RS19015 PF00571 CBS domain JC622_RS19020 PF00005 ABC transporter JC622_RS19020 PF12848 ABC transporter JC622_RS19030 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JC622_RS19070 PF00113 Enolase, C-terminal TIM barrel domain JC622_RS19070 PF03952 Enolase, N-terminal domain JC622_RS19075 PF06418 CTP synthase N-terminus JC622_RS19075 PF00117 Glutamine amidotransferase class-I JC622_RS19080 PF03819 MazG nucleotide pyrophosphohydrolase domain JC622_RS19085 PF13291 ACT domain JC622_RS19085 PF02824 TGS domain JC622_RS19085 PF04607 Region found in RelA / SpoT proteins JC622_RS19090 PF05958 tRNA (Uracil-5-)-methyltransferase JC622_RS19090 PF01938 TRAM domain JC622_RS19095 PF00672 HAMP domain JC622_RS19095 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS19095 PF01627 Hpt domain JC622_RS19095 PF00072 Response regulator receiver domain JC622_RS19095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JC622_RS19095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS19100 PF07308 Protein of unknown function (DUF1456) JC622_RS19105 PF01510 N-acetylmuramoyl-L-alanine amidase JC622_RS19110 PF00210 Ferritin-like domain JC622_RS19115 PF03063 Prismane/CO dehydrogenase family JC622_RS19120 PF00175 Oxidoreductase NAD-binding domain JC622_RS19120 PF00970 Oxidoreductase FAD-binding domain JC622_RS19120 PF00111 2Fe-2S iron-sulfur cluster binding domain JC622_RS19125 PF01370 NAD dependent epimerase/dehydratase family JC622_RS19130 PF01569 PAP2 superfamily JC622_RS19135 PF01225 Mur ligase family, catalytic domain JC622_RS19135 PF08245 Mur ligase middle domain JC622_RS19135 PF02875 Mur ligase family, glutamate ligase domain JC622_RS19140 PF02441 Flavoprotein JC622_RS19145 PF00440 Bacterial regulatory proteins, tetR family JC622_RS19150 PF00156 Phosphoribosyl transferase domain JC622_RS19155 PF00005 ABC transporter JC622_RS19160 PF01061 ABC-2 type transporter JC622_RS19190 PF00375 Sodium:dicarboxylate symporter family JC622_RS19200 PF02569 Pantoate-beta-alanine ligase JC622_RS19205 PF02548 Ketopantoate hydroxymethyltransferase JC622_RS19210 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JC622_RS19215 PF01743 Poly A polymerase head domain JC622_RS19215 PF12627 Probable RNA and SrmB- binding site of polymerase A JC622_RS19215 PF12626 Polymerase A arginine-rich C-terminus JC622_RS19220 PF00749 tRNA synthetases class I (E and Q), catalytic domain JC622_RS19225 PF01258 Prokaryotic dksA/traR C4-type zinc finger JC622_RS19230 PF03749 Sugar fermentation stimulation protein RE domain JC622_RS19230 PF17746 SfsA N-terminal OB domain JC622_RS19240 PF00270 DEAD/DEAH box helicase JC622_RS19240 PF04408 Helicase associated domain (HA2) JC622_RS19240 PF08482 ATP-dependent helicase C-terminal JC622_RS19240 PF00271 Helicase conserved C-terminal domain JC622_RS19245 PF14814 Bifunctional transglycosylase second domain JC622_RS19245 PF00905 Penicillin binding protein transpeptidase domain JC622_RS19245 PF00912 Transglycosylase JC622_RS19250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC622_RS19255 PF00893 Small Multidrug Resistance protein JC622_RS19260 PF00893 Small Multidrug Resistance protein JC622_RS19270 PF11849 Domain of unknown function (DUF3369) JC622_RS19275 PF00719 Inorganic pyrophosphatase JC622_RS19290 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) JC622_RS19305 PF00005 ABC transporter JC622_RS19325 PF08447 PAS fold JC622_RS19325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS19350 PF03600 Citrate transporter JC622_RS19350 PF02080 TrkA-C domain JC622_RS19355 PF00009 Elongation factor Tu GTP binding domain JC622_RS19360 PF01507 Phosphoadenosine phosphosulfate reductase family JC622_RS19365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC622_RS19365 PF14824 Sirohaem biosynthesis protein central JC622_RS19365 PF10414 Sirohaem synthase dimerisation region JC622_RS19370 PF01145 SPFH domain / Band 7 family JC622_RS19370 PF16200 C-terminal region of band_7 JC622_RS19375 PF01957 NfeD-like C-terminal, partner-binding JC622_RS19380 PF00672 HAMP domain JC622_RS19380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS19385 PF02445 Quinolinate synthetase A protein JC622_RS19390 PF01263 Aldose 1-epimerase JC622_RS19395 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JC622_RS19395 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JC622_RS19400 PF02446 4-alpha-glucanotransferase JC622_RS19405 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JC622_RS19405 PF02806 Alpha amylase, C-terminal all-beta domain JC622_RS19405 PF00128 Alpha amylase, catalytic domain JC622_RS19410 PF00128 Alpha amylase, catalytic domain JC622_RS19410 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JC622_RS19415 PF01641 SelR domain JC622_RS19425 PF00293 NUDIX domain JC622_RS19425 PF13344 Haloacid dehalogenase-like hydrolase JC622_RS19440 PF01037 Lrp/AsnC ligand binding domain JC622_RS19450 PF07690 Major Facilitator Superfamily JC622_RS19470 PF00209 Sodium:neurotransmitter symporter family JC622_RS19480 PF00209 Sodium:neurotransmitter symporter family JC622_RS19545 PF16331 TolA binding protein trimerisation JC622_RS19545 PF13174 Tetratricopeptide repeat JC622_RS19550 PF00691 OmpA family JC622_RS19555 PF04052 TolB amino-terminal domain JC622_RS19555 PF07676 WD40-like Beta Propeller Repeat JC622_RS19565 PF02472 Biopolymer transport protein ExbD/TolR JC622_RS19570 PF01618 MotA/TolQ/ExbB proton channel family JC622_RS19575 PF03061 Thioesterase superfamily JC622_RS19580 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) JC622_RS19585 PF08173 Membrane bound YbgT-like protein JC622_RS19590 PF02322 Cytochrome bd terminal oxidase subunit II JC622_RS19595 PF01654 Cytochrome bd terminal oxidase subunit I JC622_RS19600 PF17864 RuvB AAA lid domain JC622_RS19600 PF05491 RuvB C-terminal winged helix domain JC622_RS19600 PF05496 Holliday junction DNA helicase RuvB P-loop domain JC622_RS19605 PF07499 RuvA, C-terminal domain JC622_RS19605 PF01330 RuvA N terminal domain JC622_RS19610 PF00672 HAMP domain JC622_RS19610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS19615 PF01810 LysE type translocator JC622_RS19625 PF13737 Transposase DDE domain JC622_RS19635 PF00765 Autoinducer synthase JC622_RS19640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS19640 PF03466 LysR substrate binding domain JC622_RS19645 PF17876 Cold shock domain JC622_RS19645 PF08206 Ribonuclease B OB domain JC622_RS19645 PF00773 RNB domain JC622_RS19650 PF01590 GAF domain JC622_RS19650 PF00360 Phytochrome region JC622_RS19650 PF00563 EAL domain JC622_RS19650 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS19660 PF13419 Haloacid dehalogenase-like hydrolase JC622_RS19665 PF17209 Hfq protein JC622_RS19670 PF04403 Paraquat-inducible protein A JC622_RS19675 PF02470 MlaD protein JC622_RS19685 PF05958 tRNA (Uracil-5-)-methyltransferase JC622_RS19685 PF01938 TRAM domain JC622_RS19690 PF03129 Anticodon binding domain JC622_RS19690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC622_RS19690 PF04073 Aminoacyl-tRNA editing domain JC622_RS19695 PF00106 short chain dehydrogenase JC622_RS19710 PF00378 Enoyl-CoA hydratase/isomerase JC622_RS19715 PF10952 Protein of unknown function (DUF2753) JC622_RS19720 PF00132 Bacterial transferase hexapeptide (six repeats) JC622_RS19730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC622_RS19740 PF08447 PAS fold JC622_RS19740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS19745 PF01207 Dihydrouridine synthase (Dus) JC622_RS19750 PF01475 Ferric uptake regulator family JC622_RS19765 PF05525 Branched-chain amino acid transport protein JC622_RS19770 PF05525 Branched-chain amino acid transport protein JC622_RS19775 PF05175 Methyltransferase small domain JC622_RS19780 PF00270 DEAD/DEAH box helicase JC622_RS19780 PF00271 Helicase conserved C-terminal domain JC622_RS19785 PF13673 Acetyltransferase (GNAT) domain JC622_RS19795 PF00588 SpoU rRNA Methylase family JC622_RS19795 PF08032 RNA 2'-O ribose methyltransferase substrate binding JC622_RS19800 PF00575 S1 RNA binding domain JC622_RS19800 PF00773 RNB domain JC622_RS19800 PF08206 Ribonuclease B OB domain JC622_RS19800 PF17876 Cold shock domain JC622_RS19800 PF08461 Ribonuclease R winged-helix domain JC622_RS19805 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS19810 PF00691 OmpA family JC622_RS19810 PF01389 OmpA-like transmembrane domain JC622_RS19815 PF00657 GDSL-like Lipase/Acylhydrolase JC622_RS19820 PF04076 Bacterial OB fold (BOF) protein JC622_RS19825 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JC622_RS19825 PF01464 Transglycosylase SLT domain JC622_RS19830 PF04362 Bacterial Fe(2+) trafficking JC622_RS19835 PF10576 Iron-sulfur binding domain of endonuclease III JC622_RS19835 PF00633 Helix-hairpin-helix motif JC622_RS19835 PF00730 HhH-GPD superfamily base excision DNA repair protein JC622_RS19835 PF14815 NUDIX domain JC622_RS19840 PF01966 HD domain JC622_RS19840 PF01743 Poly A polymerase head domain JC622_RS19840 PF12627 Probable RNA and SrmB- binding site of polymerase A JC622_RS19845 PF02028 BCCT, betaine/carnitine/choline family transporter JC622_RS19860 PF04222 Protein of unknown function (DUF416) JC622_RS19865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JC622_RS19870 PF01476 LysM domain JC622_RS19870 PF08525 Opacity-associated protein A N-terminal motif JC622_RS19870 PF01551 Peptidase family M23 JC622_RS19890 PF01297 Zinc-uptake complex component A periplasmic JC622_RS19895 PF00005 ABC transporter JC622_RS19900 PF00950 ABC 3 transport family JC622_RS19905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS19905 PF03466 LysR substrate binding domain JC622_RS19915 PF03167 Uracil DNA glycosylase superfamily JC622_RS19920 PF00892 EamA-like transporter family JC622_RS19930 PF01541 GIY-YIG catalytic domain JC622_RS19945 PF04012 PspA/IM30 family JC622_RS19950 PF01553 Acyltransferase JC622_RS19970 PF00578 AhpC/TSA family JC622_RS19975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS19975 PF03466 LysR substrate binding domain JC622_RS19990 PF00226 DnaJ domain JC622_RS19990 PF01556 DnaJ C terminal domain JC622_RS19990 PF00684 DnaJ central domain JC622_RS20010 PF00854 POT family JC622_RS20020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS20020 PF03466 LysR substrate binding domain JC622_RS20030 PF03989 DNA gyrase C-terminal domain, beta-propeller JC622_RS20030 PF00521 DNA gyrase/topoisomerase IV, subunit A JC622_RS20035 PF00986 DNA gyrase B subunit, carboxyl terminus JC622_RS20035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS20035 PF01751 Toprim domain JC622_RS20035 PF00204 DNA gyrase B JC622_RS20040 PF05728 Uncharacterised protein family (UPF0227) JC622_RS20045 PF00149 Calcineurin-like phosphoesterase JC622_RS20050 PF06853 Protein of unknown function (DUF1249) JC622_RS20055 PF00293 NUDIX domain JC622_RS20060 PF02321 Outer membrane efflux protein JC622_RS20065 PF01467 Cytidylyltransferase-like JC622_RS20065 PF00294 pfkB family carbohydrate kinase JC622_RS20070 PF03279 Bacterial lipid A biosynthesis acyltransferase JC622_RS20075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC622_RS20075 PF02378 Phosphotransferase system, EIIC JC622_RS20075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC622_RS20080 PF01232 Mannitol dehydrogenase Rossmann domain JC622_RS20080 PF08125 Mannitol dehydrogenase C-terminal domain JC622_RS20085 PF05068 Mannitol repressor JC622_RS20110 PF01544 CorA-like Mg2+ transporter protein JC622_RS20115 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JC622_RS20120 PF04307 LexA-binding, inner membrane-associated putative hydrolase JC622_RS20125 PF01773 Na+ dependent nucleoside transporter N-terminus JC622_RS20125 PF07670 Nucleoside recognition JC622_RS20125 PF07662 Na+ dependent nucleoside transporter C-terminus JC622_RS20130 PF00271 Helicase conserved C-terminal domain JC622_RS20130 PF03880 DbpA RNA binding domain JC622_RS20130 PF00270 DEAD/DEAH box helicase JC622_RS20155 PF01040 UbiA prenyltransferase family JC622_RS20160 PF00425 chorismate binding enzyme JC622_RS20165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC622_RS20165 PF16582 Middle domain of thiamine pyrophosphate JC622_RS20165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JC622_RS20170 PF12697 Alpha/beta hydrolase family JC622_RS20175 PF00378 Enoyl-CoA hydratase/isomerase JC622_RS20180 PF13378 Enolase C-terminal domain-like JC622_RS20185 PF00501 AMP-binding enzyme JC622_RS20190 PF01752 Collagenase JC622_RS20190 PF08453 Peptidase family M9 N-terminal JC622_RS20195 PF02698 DUF218 domain JC622_RS20200 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JC622_RS20200 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JC622_RS20210 PF01584 CheW-like domain JC622_RS20210 PF00072 Response regulator receiver domain JC622_RS20220 PF17176 tRNA-binding domain JC622_RS20220 PF08351 Domain of unknown function (DUF1726) JC622_RS20220 PF05127 Helicase JC622_RS20220 PF13718 GNAT acetyltransferase 2 JC622_RS20235 PF00210 Ferritin-like domain JC622_RS20240 PF02142 MGS-like domain JC622_RS20245 PF00465 Iron-containing alcohol dehydrogenase JC622_RS20255 PF03577 Peptidase family C69 JC622_RS20260 PF00106 short chain dehydrogenase JC622_RS20280 PF00128 Alpha amylase, catalytic domain JC622_RS20280 PF02903 Alpha amylase, N-terminal ig-like domain JC622_RS20280 PF16657 Maltogenic Amylase, C-terminal domain JC622_RS20300 PF00884 Sulfatase JC622_RS20305 PF01037 Lrp/AsnC ligand binding domain JC622_RS20315 PF04204 Homoserine O-succinyltransferase JC622_RS20325 PF02464 Competence-damaged protein JC622_RS20325 PF00994 Probable molybdopterin binding domain JC622_RS20345 PF04363 Protein of unknown function (DUF496) JC622_RS20385 PF07883 Cupin domain JC622_RS20385 PF01381 Helix-turn-helix JC622_RS20390 PF03594 Benzoate membrane transport protein JC622_RS20400 PF02219 Methylenetetrahydrofolate reductase JC622_RS20415 PF00672 HAMP domain JC622_RS20415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS20420 PF03922 OmpW family JC622_RS20425 PF08448 PAS fold JC622_RS20425 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS20430 PF00005 ABC transporter JC622_RS20430 PF17755 UvrA DNA-binding domain JC622_RS20430 PF17760 UvrA interaction domain JC622_RS20450 PF03783 Curli production assembly/transport component CsgG JC622_RS20460 PF10627 Curli assembly protein CsgE JC622_RS20465 PF00196 Bacterial regulatory proteins, luxR family JC622_RS20470 PF00436 Single-strand binding protein family JC622_RS20500 PF13538 UvrD-like helicase C-terminal domain JC622_RS20500 PF14490 Helix-hairpin-helix containing domain JC622_RS20500 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JC622_RS20515 PF07690 Major Facilitator Superfamily JC622_RS20520 PF02909 Tetracyclin repressor-like, C-terminal domain JC622_RS20520 PF00440 Bacterial regulatory proteins, tetR family JC622_RS20535 PF01381 Helix-turn-helix JC622_RS20545 PF00872 Transposase, Mutator family JC622_RS20550 PF13438 Domain of unknown function (DUF4113) JC622_RS20550 PF00817 impB/mucB/samB family JC622_RS20550 PF11799 impB/mucB/samB family C-terminal domain JC622_RS20560 PF01545 Cation efflux family JC622_RS20560 PF16916 Dimerisation domain of Zinc Transporter JC622_RS20570 PF00313 'Cold-shock' DNA-binding domain JC622_RS20575 PF00860 Permease family JC622_RS20580 PF02733 Dak1 domain JC622_RS20585 PF02734 DAK2 domain JC622_RS20590 PF05524 PEP-utilising enzyme, N-terminal JC622_RS20590 PF03610 PTS system fructose IIA component JC622_RS20590 PF00391 PEP-utilising enzyme, mobile domain JC622_RS20590 PF00381 PTS HPr component phosphorylation site JC622_RS20595 PF00465 Iron-containing alcohol dehydrogenase JC622_RS20600 PF02954 Bacterial regulatory protein, Fis family JC622_RS20600 PF00989 PAS fold JC622_RS20600 PF00158 Sigma-54 interaction domain JC622_RS20605 PF01609 Transposase DDE domain JC622_RS20615 PF01594 AI-2E family transporter JC622_RS20620 PF01569 PAP2 superfamily JC622_RS20630 PF01479 S4 domain JC622_RS20635 PF01430 Hsp33 protein JC622_RS20640 PF01293 Phosphoenolpyruvate carboxykinase JC622_RS20645 PF00392 Bacterial regulatory proteins, gntR family JC622_RS20650 PF01321 Creatinase/Prolidase N-terminal domain JC622_RS20650 PF00557 Metallopeptidase family M24 JC622_RS20655 PF11756 Nitrous oxide-stimulated promoter JC622_RS20660 PF00583 Acetyltransferase (GNAT) family JC622_RS20665 PF05433 Glycine zipper 2TM domain JC622_RS20670 PF00909 Ammonium Transporter Family JC622_RS20675 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS20685 PF06055 Exopolysaccharide synthesis, ExoD JC622_RS20695 PF17151 Periplasmic sensor domain JC622_RS20695 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS20705 PF00132 Bacterial transferase hexapeptide (six repeats) JC622_RS20710 PF00311 Phosphoenolpyruvate carboxylase JC622_RS20715 PF01546 Peptidase family M20/M25/M40 JC622_RS20715 PF07687 Peptidase dimerisation domain JC622_RS20720 PF01118 Semialdehyde dehydrogenase, NAD binding domain JC622_RS20720 PF02774 Semialdehyde dehydrogenase, dimerisation domain JC622_RS20725 PF00696 Amino acid kinase family JC622_RS20730 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JC622_RS20730 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JC622_RS20735 PF00764 Arginosuccinate synthase JC622_RS20740 PF14698 Argininosuccinate lyase C-terminal JC622_RS20740 PF00206 Lyase JC622_RS20755 PF07670 Nucleoside recognition JC622_RS20780 PF02660 Glycerol-3-phosphate acyltransferase JC622_RS20785 PF02152 Dihydroneopterin aldolase JC622_RS20790 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JC622_RS20800 PF07690 Major Facilitator Superfamily JC622_RS20815 PF00873 AcrB/AcrD/AcrF family JC622_RS20825 PF00873 AcrB/AcrD/AcrF family JC622_RS20830 PF02492 CobW/HypB/UreG, nucleotide-binding domain JC622_RS20830 PF07683 Cobalamin synthesis protein cobW C-terminal domain JC622_RS20840 PF00563 EAL domain JC622_RS20840 PF12792 CSS motif domain associated with EAL JC622_RS20845 PF11791 Aconitate B N-terminal domain JC622_RS20845 PF06434 Aconitate hydratase 2 N-terminus JC622_RS20845 PF00330 Aconitase family (aconitate hydratase) JC622_RS20850 PF01734 Patatin-like phospholipase JC622_RS20855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS20855 PF00672 HAMP domain JC622_RS20855 PF02743 Cache domain JC622_RS20860 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS20860 PF00563 EAL domain JC622_RS20860 PF03707 Bacterial signalling protein N terminal repeat JC622_RS20865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JC622_RS20865 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS20870 PF02817 e3 binding domain JC622_RS20870 PF00364 Biotin-requiring enzyme JC622_RS20870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JC622_RS20875 PF17831 Pyruvate dehydrogenase E1 component middle domain JC622_RS20875 PF00456 Transketolase, thiamine diphosphate binding domain JC622_RS20880 PF07729 FCD domain JC622_RS20880 PF00392 Bacterial regulatory proteins, gntR family JC622_RS20885 PF01510 N-acetylmuramoyl-L-alanine amidase JC622_RS20895 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JC622_RS20895 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JC622_RS20900 PF07963 Prokaryotic N-terminal methylation motif JC622_RS20905 PF00437 Type II/IV secretion system protein JC622_RS20905 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JC622_RS20910 PF00482 Type II secretion system (T2SS), protein F JC622_RS20915 PF01478 Type IV leader peptidase family JC622_RS20915 PF06750 Bacterial Peptidase A24 N-terminal domain JC622_RS20920 PF01121 Dephospho-CoA kinase JC622_RS20925 PF07072 Cell division protein JC622_RS20930 PF03884 DNA gyrase inhibitor YacG JC622_RS20935 PF00293 NUDIX domain JC622_RS20940 PF07516 SecA Wing and Scaffold domain JC622_RS20940 PF01043 SecA preprotein cross-linking domain JC622_RS20940 PF07517 SecA DEAD-like domain JC622_RS20940 PF02810 SEC-C motif JC622_RS20950 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JC622_RS20955 PF00091 Tubulin/FtsZ family, GTPase domain JC622_RS20955 PF12327 FtsZ family, C-terminal domain JC622_RS20960 PF02491 SHS2 domain inserted in FTSA JC622_RS20965 PF03799 Cell division protein FtsQ JC622_RS20965 PF08478 POTRA domain, FtsQ-type JC622_RS20970 PF01225 Mur ligase family, catalytic domain JC622_RS20970 PF08245 Mur ligase middle domain JC622_RS20970 PF02875 Mur ligase family, glutamate ligase domain JC622_RS20975 PF03033 Glycosyltransferase family 28 N-terminal domain JC622_RS20975 PF04101 Glycosyltransferase family 28 C-terminal domain JC622_RS20980 PF01098 Cell cycle protein JC622_RS20985 PF08245 Mur ligase middle domain JC622_RS20985 PF02875 Mur ligase family, glutamate ligase domain JC622_RS20990 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JC622_RS20990 PF00953 Glycosyl transferase family 4 JC622_RS20995 PF01225 Mur ligase family, catalytic domain JC622_RS20995 PF02875 Mur ligase family, glutamate ligase domain JC622_RS20995 PF08245 Mur ligase middle domain JC622_RS21000 PF01225 Mur ligase family, catalytic domain JC622_RS21000 PF02875 Mur ligase family, glutamate ligase domain JC622_RS21000 PF08245 Mur ligase middle domain JC622_RS21005 PF00905 Penicillin binding protein transpeptidase domain JC622_RS21005 PF03717 Penicillin-binding Protein dimerisation domain JC622_RS21010 PF04999 Cell division protein FtsL JC622_RS21015 PF01795 MraW methylase family JC622_RS21020 PF02381 MraZ protein, putative antitoxin-like JC622_RS21030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC622_RS21035 PF04348 LppC putative lipoprotein JC622_RS21040 PF02021 Uncharacterised protein family UPF0102 JC622_RS21045 PF13580 SIS domain JC622_RS21050 PF04972 BON domain JC622_RS21055 PF04386 Stringent starvation protein B JC622_RS21060 PF02798 Glutathione S-transferase, N-terminal domain JC622_RS21060 PF00043 Glutathione S-transferase, C-terminal domain JC622_RS21065 PF02167 Cytochrome C1 family JC622_RS21070 PF00032 Cytochrome b(C-terminal)/b6/petD JC622_RS21070 PF00033 Cytochrome b/b6/petB JC622_RS21075 PF00355 Rieske [2Fe-2S] domain JC622_RS21075 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal JC622_RS21080 PF00380 Ribosomal protein S9/S16 JC622_RS21085 PF00572 Ribosomal protein L13 JC622_RS21090 PF03969 AFG1-like ATPase JC622_RS21100 PF00595 PDZ domain JC622_RS21100 PF13180 PDZ domain JC622_RS21105 PF13180 PDZ domain JC622_RS21135 PF01979 Amidohydrolase family JC622_RS21140 PF03841 L-seryl-tRNA selenium transferase JC622_RS21145 PF07071 KDGP aldolase JC622_RS21150 PF08279 HTH domain JC622_RS21150 PF05043 Mga helix-turn-helix domain JC622_RS21150 PF00874 PRD domain JC622_RS21150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC622_RS21155 PF00381 PTS HPr component phosphorylation site JC622_RS21160 PF03668 P-loop ATPase protein family JC622_RS21165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC622_RS21170 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JC622_RS21175 PF00309 Sigma-54 factor, Activator interacting domain (AID) JC622_RS21175 PF04963 Sigma-54 factor, core binding domain JC622_RS21175 PF04552 Sigma-54, DNA binding domain JC622_RS21180 PF00005 ABC transporter JC622_RS21180 PF12399 Branched-chain amino acid ATP-binding cassette transporter JC622_RS21185 PF03968 OstA-like protein JC622_RS21190 PF06835 Lipopolysaccharide-assembly, LptC-related JC622_RS21200 PF00571 CBS domain JC622_RS21200 PF01380 SIS domain JC622_RS21205 PF00005 ABC transporter JC622_RS21210 PF02405 Permease MlaE JC622_RS21215 PF02470 MlaD protein JC622_RS21220 PF05494 MlaC protein JC622_RS21230 PF01722 BolA-like protein JC622_RS21235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JC622_RS21240 PF01523 Putative modulator of DNA gyrase JC622_RS21245 PF04751 Protein of unknown function (DUF615) JC622_RS21250 PF07722 Peptidase C26 JC622_RS21260 PF13545 Crp-like helix-turn-helix domain JC622_RS21260 PF00027 Cyclic nucleotide-binding domain JC622_RS21270 PF13419 Haloacid dehalogenase-like hydrolase JC622_RS21275 PF02899 Phage integrase, N-terminal SAM-like domain JC622_RS21275 PF00589 Phage integrase family JC622_RS21285 PF01678 Diaminopimelate epimerase JC622_RS21290 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JC622_RS21290 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JC622_RS21300 PF01491 Frataxin-like domain JC622_RS21305 PF02230 Phospholipase/Carboxylesterase JC622_RS21310 PF01295 Adenylate cyclase, class-I JC622_RS21310 PF12633 Adenylate cyclase NT domain JC622_RS21315 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JC622_RS21315 PF03900 Porphobilinogen deaminase, C-terminal domain JC622_RS21320 PF02602 Uroporphyrinogen-III synthase HemD JC622_RS21325 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase JC622_RS21340 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JC622_RS21360 PF13520 Amino acid permease JC622_RS21365 PF00768 D-alanyl-D-alanine carboxypeptidase JC622_RS21375 PF07715 TonB-dependent Receptor Plug Domain JC622_RS21375 PF00593 TonB dependent receptor JC622_RS21395 PF03739 Lipopolysaccharide export system permease LptF/LptG JC622_RS21400 PF03739 Lipopolysaccharide export system permease LptF/LptG JC622_RS21405 PF02789 Cytosol aminopeptidase family, N-terminal domain JC622_RS21405 PF00883 Cytosol aminopeptidase family, catalytic domain JC622_RS21410 PF04364 DNA polymerase III chi subunit, HolC JC622_RS21415 PF00133 tRNA synthetases class I (I, L, M and V) JC622_RS21415 PF10458 Valyl tRNA synthetase tRNA binding arm JC622_RS21415 PF08264 Anticodon-binding domain of tRNA JC622_RS21435 PF00583 Acetyltransferase (GNAT) family JC622_RS21440 PF00199 Catalase JC622_RS21440 PF06628 Catalase-related immune-responsive JC622_RS21460 PF00196 Bacterial regulatory proteins, luxR family JC622_RS21465 PF00579 tRNA synthetases class I (W and Y) JC622_RS21465 PF01479 S4 domain JC622_RS21470 PF00561 alpha/beta hydrolase fold JC622_RS21475 PF03280 Proteobacterial lipase chaperone protein JC622_RS21490 PF00141 Peroxidase JC622_RS21495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC622_RS21495 PF12793 Sugar transport-related sRNA regulator N-term JC622_RS21505 PF01053 Cys/Met metabolism PLP-dependent enzyme JC622_RS21525 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS21535 PF00005 ABC transporter JC622_RS21535 PF08402 TOBE domain JC622_RS21545 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS21560 PF00392 Bacterial regulatory proteins, gntR family JC622_RS21560 PF07702 UTRA domain JC622_RS21575 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS21600 PF13538 UvrD-like helicase C-terminal domain JC622_RS21605 PF12705 PD-(D/E)XK nuclease superfamily JC622_RS21605 PF00580 UvrD/REP helicase N-terminal domain JC622_RS21605 PF13361 UvrD-like helicase C-terminal domain JC622_RS21610 PF17946 RecC C-terminal domain JC622_RS21615 PF07681 DoxX JC622_RS21620 PF02678 Pirin JC622_RS21620 PF17954 Quercetinase C-terminal cupin domain JC622_RS21630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS21630 PF03466 LysR substrate binding domain JC622_RS21640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS21640 PF00672 HAMP domain JC622_RS21640 PF12729 Four helix bundle sensory module for signal transduction JC622_RS21650 PF00072 Response regulator receiver domain JC622_RS21650 PF00486 Transcriptional regulatory protein, C terminal JC622_RS21655 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS21655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS21655 PF00672 HAMP domain JC622_RS21660 PF17151 Periplasmic sensor domain JC622_RS21660 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS21665 PF07715 TonB-dependent Receptor Plug Domain JC622_RS21665 PF00593 TonB dependent receptor JC622_RS21705 PF01196 Ribosomal protein L17 JC622_RS21710 PF01000 RNA polymerase Rpb3/RpoA insert domain JC622_RS21710 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JC622_RS21710 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JC622_RS21715 PF00163 Ribosomal protein S4/S9 N-terminal domain JC622_RS21715 PF01479 S4 domain JC622_RS21720 PF00411 Ribosomal protein S11 JC622_RS21725 PF00416 Ribosomal protein S13/S18 JC622_RS21730 PF00444 Ribosomal protein L36 JC622_RS21735 PF00344 SecY translocase JC622_RS21740 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JC622_RS21745 PF00327 Ribosomal protein L30p/L7e JC622_RS21750 PF03719 Ribosomal protein S5, C-terminal domain JC622_RS21750 PF00333 Ribosomal protein S5, N-terminal domain JC622_RS21755 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JC622_RS21760 PF00347 Ribosomal protein L6 JC622_RS21765 PF00410 Ribosomal protein S8 JC622_RS21770 PF00253 Ribosomal protein S14p/S29e JC622_RS21775 PF00281 Ribosomal protein L5 JC622_RS21775 PF00673 ribosomal L5P family C-terminus JC622_RS21780 PF00467 KOW motif JC622_RS21780 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JC622_RS21785 PF00238 Ribosomal protein L14p/L23e JC622_RS21790 PF00366 Ribosomal protein S17 JC622_RS21795 PF00831 Ribosomal L29 protein JC622_RS21800 PF00252 Ribosomal protein L16p/L10e JC622_RS21805 PF00189 Ribosomal protein S3, C-terminal domain JC622_RS21805 PF07650 KH domain JC622_RS21810 PF00237 Ribosomal protein L22p/L17e JC622_RS21815 PF00203 Ribosomal protein S19 JC622_RS21820 PF03947 Ribosomal Proteins L2, C-terminal domain JC622_RS21820 PF00181 Ribosomal Proteins L2, RNA binding domain JC622_RS21825 PF00276 Ribosomal protein L23 JC622_RS21830 PF00573 Ribosomal protein L4/L1 family JC622_RS21835 PF00297 Ribosomal protein L3 JC622_RS21840 PF00338 Ribosomal protein S10p/S20e JC622_RS21850 PF00672 HAMP domain JC622_RS21850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS21850 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS21855 PF00072 Response regulator receiver domain JC622_RS21855 PF00486 Transcriptional regulatory protein, C terminal JC622_RS21860 PF01272 Transcription elongation factor, GreA/GreB, C-term JC622_RS21860 PF03449 Transcription elongation factor, N-terminal JC622_RS21865 PF17674 HHH domain JC622_RS21865 PF00575 S1 RNA binding domain JC622_RS21865 PF09371 Tex-like protein N-terminal domain JC622_RS21865 PF16921 Tex protein YqgF-like domain JC622_RS21885 PF00561 alpha/beta hydrolase fold JC622_RS21890 PF00156 Phosphoribosyl transferase domain JC622_RS21895 PF01521 Iron-sulphur cluster biosynthesis JC622_RS21895 PF01106 NifU-like domain JC622_RS21900 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JC622_RS21900 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JC622_RS21905 PF02556 Preprotein translocase subunit SecB JC622_RS21910 PF00581 Rhodanese-like domain JC622_RS21915 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JC622_RS21915 PF01676 Metalloenzyme superfamily JC622_RS21920 PF01551 Peptidase family M23 JC622_RS21930 PF00356 Bacterial regulatory proteins, lacI family JC622_RS21930 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JC622_RS21935 PF01081 KDPG and KHG aldolase JC622_RS21940 PF00920 Dehydratase family JC622_RS21945 PF01202 Shikimate kinase JC622_RS21950 PF02447 GntP family permease JC622_RS21955 PF13091 PLD-like domain JC622_RS21960 PF00270 DEAD/DEAH box helicase JC622_RS21960 PF00271 Helicase conserved C-terminal domain JC622_RS21960 PF17191 RecG wedge domain JC622_RS21970 PF00583 Acetyltransferase (GNAT) family JC622_RS21970 PF09500 Putative thioesterase (yiiD_Cterm) JC622_RS21975 PF17284 Spermidine synthase tetramerisation domain JC622_RS21980 PF02580 D-Tyr-tRNA(Tyr) deacylase JC622_RS21985 PF03631 Virulence factor BrkB JC622_RS21990 PF03949 Malic enzyme, NAD binding domain JC622_RS21990 PF00390 Malic enzyme, N-terminal domain JC622_RS21995 PF03222 Tryptophan/tyrosine permease family JC622_RS22000 PF11066 Protein of unknown function (DUF2867) JC622_RS22000 PF13460 NAD(P)H-binding JC622_RS22010 PF00270 DEAD/DEAH box helicase JC622_RS22010 PF00271 Helicase conserved C-terminal domain JC622_RS22010 PF17764 3′ DNA-binding domain (3′BD) JC622_RS22010 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JC622_RS22010 PF18074 Primosomal protein N C-terminal domain JC622_RS22015 PF01197 Ribosomal protein L31 JC622_RS22025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS22025 PF00672 HAMP domain JC622_RS22030 PF03737 Aldolase/RraA JC622_RS22035 PF02592 Putative vitamin uptake transporter JC622_RS22045 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JC622_RS22050 PF00034 Cytochrome c JC622_RS22055 PF00270 DEAD/DEAH box helicase JC622_RS22055 PF00271 Helicase conserved C-terminal domain JC622_RS22055 PF00570 HRDC domain JC622_RS22055 PF16124 RecQ zinc-binding JC622_RS22055 PF09382 RQC domain JC622_RS22060 PF03061 Thioesterase superfamily JC622_RS22075 PF03473 MOSC domain JC622_RS22075 PF03475 3-alpha domain JC622_RS22080 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS22085 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS22090 PF00005 ABC transporter JC622_RS22090 PF08402 TOBE domain JC622_RS22095 PF13416 Bacterial extracellular solute-binding protein JC622_RS22100 PF13416 Bacterial extracellular solute-binding protein JC622_RS22105 PF00202 Aminotransferase class-III JC622_RS22110 PF00120 Glutamine synthetase, catalytic domain JC622_RS22115 PF01258 Prokaryotic dksA/traR C4-type zinc finger JC622_RS22130 PF05981 CreA protein JC622_RS22135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JC622_RS22135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JC622_RS22140 PF00012 Hsp70 protein JC622_RS22155 PF00128 Alpha amylase, catalytic domain JC622_RS22155 PF02903 Alpha amylase, N-terminal ig-like domain JC622_RS22165 PF16254 Domain of unknown function (DUF4910) JC622_RS22165 PF09940 Domain of unknown function (DUF2172) JC622_RS22165 PF16221 winged helix-turn-helix JC622_RS22200 PF05958 tRNA (Uracil-5-)-methyltransferase JC622_RS22205 PF02743 Cache domain JC622_RS22205 PF00672 HAMP domain JC622_RS22205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS22210 PF02653 Branched-chain amino acid transport system / permease component JC622_RS22215 PF00005 ABC transporter JC622_RS22220 PF13407 Periplasmic binding protein domain JC622_RS22225 PF02837 Glycosyl hydrolases family 2, sugar binding domain JC622_RS22225 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JC622_RS22225 PF02929 Beta galactosidase small chain JC622_RS22225 PF16353 Domain of unknown function(DUF4981) JC622_RS22225 PF00703 Glycosyl hydrolases family 2 JC622_RS22230 PF00356 Bacterial regulatory proteins, lacI family JC622_RS22235 PF16363 GDP-mannose 4,6 dehydratase JC622_RS22240 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JC622_RS22240 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JC622_RS22245 PF00288 GHMP kinases N terminal domain JC622_RS22245 PF08544 GHMP kinases C terminal JC622_RS22245 PF10509 Galactokinase galactose-binding signature JC622_RS22250 PF01263 Aldose 1-epimerase JC622_RS22255 PF02673 Bacitracin resistance protein BacA JC622_RS22265 PF04545 Sigma-70, region 4 JC622_RS22265 PF04542 Sigma-70 region 2 JC622_RS22275 PF00750 tRNA synthetases class I (R) JC622_RS22275 PF05746 DALR anticodon binding domain JC622_RS22275 PF03485 Arginyl tRNA synthetase N terminal domain JC622_RS22285 PF00227 Proteasome subunit JC622_RS22290 PF07724 AAA domain (Cdc48 subfamily) JC622_RS22290 PF00004 ATPase family associated with various cellular activities (AAA) JC622_RS22290 PF10431 C-terminal, D2-small domain, of ClpB protein JC622_RS22300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JC622_RS22305 PF00005 ABC transporter JC622_RS22320 PF18267 Rubredoxin NAD+ reductase C-terminal domain JC622_RS22320 PF04324 BFD-like [2Fe-2S] binding domain JC622_RS22320 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JC622_RS22320 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JC622_RS22320 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC622_RS22330 PF13806 Rieske-like [2Fe-2S] domain JC622_RS22335 PF01226 Formate/nitrite transporter JC622_RS22340 PF14824 Sirohaem biosynthesis protein central JC622_RS22340 PF10414 Sirohaem synthase dimerisation region JC622_RS22340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC622_RS22345 PF03448 MgtE intracellular N domain JC622_RS22345 PF01769 Divalent cation transporter JC622_RS22345 PF00571 CBS domain JC622_RS22355 PF02872 5'-nucleotidase, C-terminal domain JC622_RS22355 PF00149 Calcineurin-like phosphoesterase JC622_RS22360 PF02653 Branched-chain amino acid transport system / permease component JC622_RS22365 PF02653 Branched-chain amino acid transport system / permease component JC622_RS22370 PF00005 ABC transporter JC622_RS22375 PF02608 ABC transporter substrate-binding protein PnrA-like JC622_RS22380 PF00580 UvrD/REP helicase N-terminal domain JC622_RS22380 PF13361 UvrD-like helicase C-terminal domain JC622_RS22430 PF14001 YdfZ protein JC622_RS22455 PF01810 LysE type translocator JC622_RS22460 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JC622_RS22460 PF12833 Helix-turn-helix domain JC622_RS22485 PF00535 Glycosyl transferase family 2 JC622_RS22500 PF01370 NAD dependent epimerase/dehydratase family JC622_RS22505 PF08360 QacR-like protein, C-terminal region JC622_RS22505 PF00440 Bacterial regulatory proteins, tetR family JC622_RS22510 PF00155 Aminotransferase class I and II JC622_RS22515 PF08240 Alcohol dehydrogenase GroES-like domain JC622_RS22515 PF00107 Zinc-binding dehydrogenase JC622_RS22520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JC622_RS22525 PF00563 EAL domain JC622_RS22525 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS22525 PF03707 Bacterial signalling protein N terminal repeat JC622_RS22530 PF13361 UvrD-like helicase C-terminal domain JC622_RS22530 PF00580 UvrD/REP helicase N-terminal domain JC622_RS22535 PF00266 Aminotransferase class-V JC622_RS22540 PF02657 Fe-S metabolism associated domain JC622_RS22545 PF00899 ThiF family JC622_RS22575 PF00132 Bacterial transferase hexapeptide (six repeats) JC622_RS22580 PF00476 DNA polymerase family A JC622_RS22580 PF01367 5'-3' exonuclease, C-terminal SAM fold JC622_RS22580 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JC622_RS22580 PF01612 3'-5' exonuclease JC622_RS22590 PF06005 Cell division protein ZapB JC622_RS22600 PF06426 Serine acetyltransferase, N-terminal JC622_RS22600 PF00132 Bacterial transferase hexapeptide (six repeats) JC622_RS22605 PF16916 Dimerisation domain of Zinc Transporter JC622_RS22605 PF01545 Cation efflux family JC622_RS22610 PF00072 Response regulator receiver domain JC622_RS22610 PF00486 Transcriptional regulatory protein, C terminal JC622_RS22615 PF16527 Two-component sensor protein CpxA, periplasmic domain JC622_RS22615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS22615 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS22615 PF00672 HAMP domain JC622_RS22620 PF00588 SpoU rRNA Methylase family JC622_RS22625 PF01554 MatE JC622_RS22630 PF02630 SCO1/SenC JC622_RS22640 PF00717 Peptidase S24-like JC622_RS22640 PF01726 LexA DNA binding domain JC622_RS22645 PF01553 Acyltransferase JC622_RS22650 PF01040 UbiA prenyltransferase family JC622_RS22655 PF04345 Chorismate lyase JC622_RS22675 PF00107 Zinc-binding dehydrogenase JC622_RS22675 PF08240 Alcohol dehydrogenase GroES-like domain JC622_RS22680 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JC622_RS22685 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JC622_RS22690 PF00535 Glycosyl transferase family 2 JC622_RS22695 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JC622_RS22700 PF01467 Cytidylyltransferase-like JC622_RS22705 PF04393 Protein of unknown function (DUF535) JC622_RS22710 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JC622_RS22710 PF06827 Zinc finger found in FPG and IleRS JC622_RS22710 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JC622_RS22720 PF00471 Ribosomal protein L33 JC622_RS22725 PF00830 Ribosomal L28 family JC622_RS22730 PF04002 RadC-like JAB domain JC622_RS22735 PF02441 Flavoprotein JC622_RS22735 PF04127 DNA / pantothenate metabolism flavoprotein JC622_RS22740 PF00692 dUTPase JC622_RS22745 PF00440 Bacterial regulatory proteins, tetR family JC622_RS22750 PF05552 Conserved TM helix JC622_RS22750 PF00924 Mechanosensitive ion channel JC622_RS22755 PF00342 Phosphoglucose isomerase JC622_RS22760 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JC622_RS22760 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JC622_RS22765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC622_RS22765 PF03466 LysR substrate binding domain JC622_RS22780 PF13607 Succinyl-CoA ligase like flavodoxin domain JC622_RS22780 PF13380 CoA binding domain JC622_RS22780 PF00583 Acetyltransferase (GNAT) family JC622_RS22810 PF12724 Flavodoxin domain JC622_RS22815 PF02386 Cation transport protein JC622_RS22820 PF01205 Uncharacterized protein family UPF0029 JC622_RS22820 PF09186 Domain of unknown function (DUF1949) JC622_RS22825 PF00557 Metallopeptidase family M24 JC622_RS22830 PF13193 AMP-binding enzyme C-terminal domain JC622_RS22830 PF00501 AMP-binding enzyme JC622_RS22835 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JC622_RS22835 PF00378 Enoyl-CoA hydratase/isomerase JC622_RS22835 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JC622_RS22840 PF02803 Thiolase, C-terminal domain JC622_RS22840 PF00108 Thiolase, N-terminal domain JC622_RS22845 PF00486 Transcriptional regulatory protein, C terminal JC622_RS22845 PF00072 Response regulator receiver domain JC622_RS22850 PF00672 HAMP domain JC622_RS22850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS22850 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS22855 PF01547 Bacterial extracellular solute-binding protein JC622_RS22865 PF01206 Sulfurtransferase TusA JC622_RS22870 PF01042 Endoribonuclease L-PSP JC622_RS22875 PF00691 OmpA family JC622_RS22875 PF13488 Glycine zipper JC622_RS22880 PF03352 Methyladenine glycosylase JC622_RS22885 PF02091 Glycyl-tRNA synthetase alpha subunit JC622_RS22890 PF05746 DALR anticodon binding domain JC622_RS22890 PF02092 Glycyl-tRNA synthetase beta subunit JC622_RS22900 PF00563 EAL domain JC622_RS22900 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS22900 PF13426 PAS domain JC622_RS22905 PF03496 ADP-ribosyltransferase exoenzyme JC622_RS22905 PF03545 Yersinia virulence determinant (YopE) JC622_RS22910 PF03545 Yersinia virulence determinant (YopE) JC622_RS22910 PF03496 ADP-ribosyltransferase exoenzyme JC622_RS22915 PF05932 Tir chaperone protein (CesT) family JC622_RS22925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC622_RS22925 PF00672 HAMP domain JC622_RS22930 PF00356 Bacterial regulatory proteins, lacI family JC622_RS22935 PF13458 Periplasmic binding protein JC622_RS22940 PF02653 Branched-chain amino acid transport system / permease component JC622_RS22945 PF02653 Branched-chain amino acid transport system / permease component JC622_RS22945 PF11862 Domain of unknown function (DUF3382) JC622_RS22950 PF00005 ABC transporter JC622_RS22950 PF12399 Branched-chain amino acid ATP-binding cassette transporter JC622_RS22955 PF00005 ABC transporter JC622_RS22960 PF00581 Rhodanese-like domain JC622_RS22965 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JC622_RS22965 PF01694 Rhomboid family JC622_RS22970 PF04380 Membrane fusogenic activity JC622_RS22975 PF00563 EAL domain JC622_RS22975 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS22975 PF08447 PAS fold JC622_RS22975 PF08448 PAS fold JC622_RS22980 PF00175 Oxidoreductase NAD-binding domain JC622_RS22985 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JC622_RS22995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JC622_RS22995 PF07498 Rho termination factor, N-terminal domain JC622_RS22995 PF07497 Rho termination factor, RNA-binding domain JC622_RS23000 PF00085 Thioredoxin JC622_RS23005 PF00271 Helicase conserved C-terminal domain JC622_RS23005 PF00270 DEAD/DEAH box helicase JC622_RS23010 PF02541 Ppx/GppA phosphatase family JC622_RS23020 PF04445 Putative SAM-dependent methyltransferase JC622_RS23025 PF03707 Bacterial signalling protein N terminal repeat JC622_RS23025 PF00990 Diguanylate cyclase, GGDEF domain JC622_RS23025 PF00563 EAL domain JC622_RS23030 PF01432 Peptidase family M3 JC622_RS23035 PF00704 Glycosyl hydrolases family 18 JC622_RS23040 PF18416 N-acetylglucosamine binding protein domain 2 JC622_RS23040 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JC622_RS23045 PF00490 Delta-aminolevulinic acid dehydratase JC622_RS23050 PF01026 TatD related DNase JC622_RS23055 PF00902 Sec-independent protein translocase protein (TatC) JC622_RS23060 PF02416 mttA/Hcf106 family JC622_RS23065 PF02416 mttA/Hcf106 family JC622_RS23070 PF03109 ABC1 family JC622_RS23075 PF02036 SCP-2 sterol transfer family JC622_RS23080 PF01209 ubiE/COQ5 methyltransferase family JC622_RS23085 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JC622_RS23090 PF07969 Amidohydrolase family JC622_RS23095 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JC622_RS23130 PF03544 Gram-negative bacterial TonB protein C-terminal JC622_RS23135 PF02472 Biopolymer transport protein ExbD/TolR JC622_RS23140 PF01618 MotA/TolQ/ExbB proton channel family JC622_RS23145 PF01618 MotA/TolQ/ExbB proton channel family JC622_RS23155 PF03472 Autoinducer binding domain JC622_RS23155 PF00196 Bacterial regulatory proteins, luxR family JC622_RS23180 PF06527 TniQ JC622_RS23180 PF15978 Tn7-like transposition protein D JC622_RS23185 PF11426 Tn7 transposition regulator TnsC JC622_RS23185 PF13401 AAA domain JC622_RS23190 PF00665 Integrase core domain JC622_RS23195 PF08721 TnsA endonuclease C terminal JC622_RS23195 PF08722 TnsA endonuclease N terminal JC622_RS23200 PF01380 SIS domain JC622_RS23205 PF00455 DeoR C terminal sensor domain JC622_RS23205 PF08220 DeoR-like helix-turn-helix domain JC622_RS23210 PF00486 Transcriptional regulatory protein, C terminal JC622_RS23210 PF00072 Response regulator receiver domain JC622_RS23215 PF00672 HAMP domain JC622_RS23215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC622_RS23215 PF00512 His Kinase A (phospho-acceptor) domain JC622_RS23220 PF00905 Penicillin binding protein transpeptidase domain JC622_RS23230 PF06123 Inner membrane protein CreD JC622_RS23245 PF00534 Glycosyl transferases group 1 JC622_RS23245 PF13439 Glycosyltransferase Family 4 JC622_RS23250 PF14602 Hexapeptide repeat of succinyl-transferase JC622_RS23250 PF00132 Bacterial transferase hexapeptide (six repeats) JC622_RS23250 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JC622_RS23275 PF13614 AAA domain JC622_RS23275 PF13807 G-rich domain on putative tyrosine kinase JC622_RS23275 PF02706 Chain length determinant protein JC622_RS23290 PF02397 Bacterial sugar transferase JC622_RS23295 PF00132 Bacterial transferase hexapeptide (six repeats) JC622_RS23295 PF14602 Hexapeptide repeat of succinyl-transferase JC622_RS23295 PF12804 MobA-like NTP transferase domain JC622_RS23300 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JC622_RS23300 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JC622_RS23305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JC622_RS23305 PF02874 ATP synthase alpha/beta family, beta-barrel domain JC622_RS23310 PF00231 ATP synthase JC622_RS23315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JC622_RS23315 PF00306 ATP synthase alpha/beta chain, C terminal domain JC622_RS23315 PF02874 ATP synthase alpha/beta family, beta-barrel domain JC622_RS23320 PF00213 ATP synthase delta (OSCP) subunit JC622_RS23325 PF00430 ATP synthase B/B' CF(0) JC622_RS23330 PF00137 ATP synthase subunit C JC622_RS23335 PF00119 ATP synthase A chain JC622_RS23345 PF17762 HTH domain found in ParB protein JC622_RS23345 PF02195 ParB-like nuclease domain JC622_RS23350 PF13614 AAA domain JC622_RS23355 PF02527 rRNA small subunit methyltransferase G JC622_RS23360 PF01134 Glucose inhibited division protein A JC622_RS23360 PF13932 GidA associated domain JC622_RS23365 PF00258 Flavodoxin JC622_RS23370 PF00593 TonB dependent receptor JC622_RS23370 PF07715 TonB-dependent Receptor Plug Domain JC622_RS23375 PF00005 ABC transporter JC622_RS23380 PF00005 ABC transporter JC622_RS23385 PF01497 Periplasmic binding protein JC622_RS23390 PF01032 FecCD transport family JC622_RS23395 PF13657 HipA N-terminal domain JC622_RS23395 PF07804 HipA-like C-terminal domain JC622_RS23435 PF04851 Type III restriction enzyme, res subunit JC622_RS23435 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) JC622_RS23435 PF08463 EcoEI R protein C-terminal JC622_RS23435 PF00271 Helicase conserved C-terminal domain JC622_RS23440 PF12161 HsdM N-terminal domain JC622_RS23440 PF02384 N-6 DNA Methylase JC622_RS23445 PF01420 Type I restriction modification DNA specificity domain JC622_RS23490 PF02899 Phage integrase, N-terminal SAM-like domain JC622_RS23490 PF00589 Phage integrase family JC622_RS23495 PF01926 50S ribosome-binding GTPase JC622_RS23495 PF12631 MnmE helical domain JC622_RS23495 PF10396 GTP-binding protein TrmE N-terminus JC622_RS23500 PF02096 60Kd inner membrane protein JC622_RS23500 PF14849 YidC periplasmic domain JC622_RS23505 PF01809 Putative membrane protein insertion efficiency factor JC622_RS23510 PF00825 Ribonuclease P JC622_RS23515 PF00468 Ribosomal protein L34 JC622_RS23520 PF00005 ABC transporter JC622_RS23525 PF00528 Binding-protein-dependent transport system inner membrane component JC622_RS23530 PF00497 Bacterial extracellular solute-binding proteins, family 3