locus-tag class description WM43_RS00010 PF12843 Putative quorum-sensing-regulated virulence factor WM43_RS00015 PF01923 Cobalamin adenosyltransferase WM43_RS00020 PF00816 H-NS histone family WM43_RS00025 PF03553 Na+/H+ antiporter family WM43_RS00030 PF00265 Thymidine kinase WM43_RS00040 PF10722 Putative bacterial sensory transduction regulator WM43_RS00075 PF01555 DNA methylase WM43_RS00135 PF04002 RadC-like JAB domain WM43_RS00165 PF00239 Resolvase, N terminal domain WM43_RS00165 PF02796 Helix-turn-helix domain of resolvase WM43_RS00185 PF00816 H-NS histone family WM43_RS00190 PF13737 Transposase DDE domain WM43_RS00205 PF00589 Phage integrase family WM43_RS00205 PF13356 Arm DNA-binding domain WM43_RS00210 PF02132 RecR protein WM43_RS00210 PF13662 Toprim domain WM43_RS00215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS00215 PF00183 Hsp90 protein WM43_RS00220 PF00005 ABC transporter WM43_RS00225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WM43_RS00225 PF00005 ABC transporter WM43_RS00230 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS00230 PF12911 N-terminal TM domain of oligopeptide transport permease C WM43_RS00235 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS00240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WM43_RS00245 PF02954 Bacterial regulatory protein, Fis family WM43_RS00245 PF00158 Sigma-54 interaction domain WM43_RS00250 PF04012 PspA/IM30 family WM43_RS00255 PF06667 Phage shock protein B WM43_RS00265 PF04317 YcjX-like family, DUF463 WM43_RS00270 PF05128 Domain of unknown function (DUF697) WM43_RS00275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS00275 PF03466 LysR substrate binding domain WM43_RS00280 PF13416 Bacterial extracellular solute-binding protein WM43_RS00285 PF08402 TOBE domain WM43_RS00285 PF00005 ABC transporter WM43_RS00290 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS00295 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS00300 PF00171 Aldehyde dehydrogenase family WM43_RS00310 PF01329 Pterin 4 alpha carbinolamine dehydratase WM43_RS00315 PF18024 Helix-turn-helix domain WM43_RS00315 PF00158 Sigma-54 interaction domain WM43_RS00325 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS00325 PF17152 Periplasmic sensor domain WM43_RS00330 PF00691 OmpA family WM43_RS00335 PF03741 Integral membrane protein TerC family WM43_RS00345 PF08891 YfcL protein WM43_RS00350 PF00501 AMP-binding enzyme WM43_RS00355 PF01053 Cys/Met metabolism PLP-dependent enzyme WM43_RS00365 PF13460 NAD(P)H-binding WM43_RS00370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS00370 PF03466 LysR substrate binding domain WM43_RS00375 PF03466 LysR substrate binding domain WM43_RS00375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS00380 PF07690 Major Facilitator Superfamily WM43_RS00385 PF05726 Pirin C-terminal cupin domain WM43_RS00385 PF02678 Pirin WM43_RS00390 PF00857 Isochorismatase family WM43_RS00395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS00395 PF03466 LysR substrate binding domain WM43_RS00400 PF03466 LysR substrate binding domain WM43_RS00400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS00405 PF01717 Cobalamin-independent synthase, Catalytic domain WM43_RS00405 PF08267 Cobalamin-independent synthase, N-terminal domain WM43_RS00415 PF03466 LysR substrate binding domain WM43_RS00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS00420 PF00232 Glycosyl hydrolase family 1 WM43_RS00425 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding WM43_RS00425 PF18381 YcaO cyclodehydratase C-terminal domain WM43_RS00430 PF01226 Formate/nitrite transporter WM43_RS00435 PF01228 Glycine radical WM43_RS00435 PF02901 Pyruvate formate lyase-like WM43_RS00445 PF03692 Putative zinc- or iron-chelating domain WM43_RS00460 PF00343 Carbohydrate phosphorylase WM43_RS00465 PF00939 Sodium:sulfate symporter transmembrane region WM43_RS00470 PF00085 Thioredoxin WM43_RS00475 PF00672 HAMP domain WM43_RS00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS00475 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS00475 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) WM43_RS00475 PF01627 Hpt domain WM43_RS00475 PF00072 Response regulator receiver domain WM43_RS00480 PF00005 ABC transporter WM43_RS00480 PF00664 ABC transporter transmembrane region WM43_RS00485 PF00664 ABC transporter transmembrane region WM43_RS00485 PF00005 ABC transporter WM43_RS00510 PF08543 Phosphomethylpyrimidine kinase WM43_RS00515 PF00465 Iron-containing alcohol dehydrogenase WM43_RS00520 PF13673 Acetyltransferase (GNAT) domain WM43_RS00535 PF13673 Acetyltransferase (GNAT) domain WM43_RS00545 PF00285 Citrate synthase, C-terminal domain WM43_RS00550 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WM43_RS00555 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WM43_RS00560 PF02910 Fumarate reductase flavoprotein C-term WM43_RS00560 PF00890 FAD binding domain WM43_RS00565 PF13085 2Fe-2S iron-sulfur cluster binding domain WM43_RS00570 PF02779 Transketolase, pyrimidine binding domain WM43_RS00570 PF16870 2-oxoglutarate dehydrogenase C-terminal WM43_RS00570 PF00676 Dehydrogenase E1 component WM43_RS00570 PF16078 2-oxoglutarate dehydrogenase N-terminus WM43_RS00575 PF02817 e3 binding domain WM43_RS00575 PF00364 Biotin-requiring enzyme WM43_RS00575 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WM43_RS00580 PF00549 CoA-ligase WM43_RS00580 PF08442 ATP-grasp domain WM43_RS00585 PF02629 CoA binding domain WM43_RS00585 PF00549 CoA-ligase WM43_RS00600 PF01184 GPR1/FUN34/yaaH family WM43_RS00615 PF09278 MerR, DNA binding WM43_RS00615 PF00376 MerR family regulatory protein WM43_RS00620 PF00682 HMGL-like WM43_RS00625 PF00364 Biotin-requiring enzyme WM43_RS00625 PF00289 Biotin carboxylase, N-terminal domain WM43_RS00625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WM43_RS00625 PF02785 Biotin carboxylase C-terminal domain WM43_RS00630 PF00378 Enoyl-CoA hydratase/isomerase WM43_RS00635 PF01039 Carboxyl transferase domain WM43_RS00640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM43_RS00640 PF02770 Acyl-CoA dehydrogenase, middle domain WM43_RS00640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM43_RS00645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM43_RS00645 PF02770 Acyl-CoA dehydrogenase, middle domain WM43_RS00645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM43_RS00650 PF00378 Enoyl-CoA hydratase/isomerase WM43_RS00655 PF00378 Enoyl-CoA hydratase/isomerase WM43_RS00660 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WM43_RS00660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WM43_RS00670 PF13520 Amino acid permease WM43_RS00675 PF01925 Sulfite exporter TauE/SafE WM43_RS00690 PF01527 Transposase WM43_RS00695 PF00665 Integrase core domain WM43_RS00705 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS00705 PF00072 Response regulator receiver domain WM43_RS00705 PF09308 LuxQ, periplasmic WM43_RS00705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS00735 PF00211 Adenylate and Guanylate cyclase catalytic domain WM43_RS00735 PF00072 Response regulator receiver domain WM43_RS00740 PF00534 Glycosyl transferases group 1 WM43_RS00745 PF02397 Bacterial sugar transferase WM43_RS00750 PF07238 PilZ domain WM43_RS00750 PF03552 Cellulose synthase WM43_RS00750 PF00535 Glycosyl transferase family 2 WM43_RS00755 PF00534 Glycosyl transferases group 1 WM43_RS00755 PF13439 Glycosyltransferase Family 4 WM43_RS00830 PF00534 Glycosyl transferases group 1 WM43_RS00830 PF13439 Glycosyltransferase Family 4 WM43_RS00835 PF00534 Glycosyl transferases group 1 WM43_RS00835 PF00862 Sucrose synthase WM43_RS00840 PF01590 GAF domain WM43_RS00840 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS00840 PF00360 Phytochrome region WM43_RS00840 PF00563 EAL domain WM43_RS00845 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal WM43_RS00845 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WM43_RS00850 PF13247 4Fe-4S dicluster domain WM43_RS00855 PF03916 Polysulphide reductase, NrfD WM43_RS00860 PF00374 Nickel-dependent hydrogenase WM43_RS00865 PF01750 Hydrogenase maturation protease WM43_RS00870 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE WM43_RS00875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WM43_RS00880 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS00885 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS00885 PF12911 N-terminal TM domain of oligopeptide transport permease C WM43_RS00890 PF00005 ABC transporter WM43_RS00895 PF00005 ABC transporter WM43_RS00895 PF08402 TOBE domain WM43_RS00900 PF02492 CobW/HypB/UreG, nucleotide-binding domain WM43_RS00905 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA WM43_RS00910 PF00586 AIR synthase related protein, N-terminal domain WM43_RS00910 PF02769 AIR synthase related protein, C-terminal domain WM43_RS00915 PF01924 Hydrogenase formation hypA family WM43_RS00920 PF01455 HupF/HypC family WM43_RS00925 PF01300 Telomere recombination WM43_RS00925 PF00708 Acylphosphatase WM43_RS00925 PF17788 HypF Kae1-like domain WM43_RS00925 PF07503 HypF finger WM43_RS00930 PF09105 Elongation factor SelB, winged helix WM43_RS00930 PF00009 Elongation factor Tu GTP binding domain WM43_RS00930 PF03144 Elongation factor Tu domain 2 WM43_RS00930 PF09107 Elongation factor SelB, winged helix WM43_RS00930 PF09106 Elongation factor SelB, winged helix WM43_RS00945 PF03841 L-seryl-tRNA selenium transferase WM43_RS00945 PF12390 Selenocysteine synthase N terminal WM43_RS00950 PF01750 Hydrogenase maturation protease WM43_RS00955 PF07450 Formate hydrogenlyase maturation protein HycH WM43_RS00960 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WM43_RS00965 PF12838 4Fe-4S dicluster domain WM43_RS00970 PF00374 Nickel-dependent hydrogenase WM43_RS00970 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit WM43_RS00970 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit WM43_RS00975 PF00146 NADH dehydrogenase WM43_RS00980 PF00361 Proton-conducting membrane transporter WM43_RS00985 PF12798 4Fe-4S binding domain WM43_RS00985 PF00037 4Fe-4S binding domain WM43_RS00990 PF02705 K+ potassium transporter WM43_RS01005 PF13247 4Fe-4S dicluster domain WM43_RS01005 PF12800 4Fe-4S binding domain WM43_RS01010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WM43_RS01010 PF00384 Molybdopterin oxidoreductase WM43_RS01010 PF01568 Molydopterin dinucleotide binding domain WM43_RS01015 PF01568 Molydopterin dinucleotide binding domain WM43_RS01015 PF00384 Molybdopterin oxidoreductase WM43_RS01015 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WM43_RS01025 PF02954 Bacterial regulatory protein, Fis family WM43_RS01025 PF00158 Sigma-54 interaction domain WM43_RS01025 PF01590 GAF domain WM43_RS01030 PF02634 FdhD/NarQ family WM43_RS01035 PF02774 Semialdehyde dehydrogenase, dimerisation domain WM43_RS01035 PF01118 Semialdehyde dehydrogenase, NAD binding domain WM43_RS01040 PF01266 FAD dependent oxidoreductase WM43_RS01045 PF04244 Deoxyribodipyrimidine photo-lyase-related protein WM43_RS01050 PF01212 Beta-eliminating lyase WM43_RS01055 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region WM43_RS01055 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WM43_RS01060 PF04172 LrgB-like family WM43_RS01065 PF03788 LrgA family WM43_RS01080 PF08411 Exonuclease C-terminal WM43_RS01080 PF00929 Exonuclease WM43_RS01100 PF13808 DDE_Tnp_1-associated WM43_RS01100 PF01609 Transposase DDE domain WM43_RS01110 PF01926 50S ribosome-binding GTPase WM43_RS01135 PF00350 Dynamin family WM43_RS01140 PF01695 IstB-like ATP binding protein WM43_RS01145 PF00665 Integrase core domain WM43_RS01195 PF01527 Transposase WM43_RS01200 PF13186 Iron-sulfur cluster-binding domain WM43_RS01200 PF04055 Radical SAM superfamily WM43_RS01210 PF03781 Sulfatase-modifying factor enzyme 1 WM43_RS01215 PF03466 LysR substrate binding domain WM43_RS01215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS01225 PF07584 Aerotolerance regulator N-terminal WM43_RS01225 PF13519 von Willebrand factor type A domain WM43_RS01230 PF13519 von Willebrand factor type A domain WM43_RS01230 PF07584 Aerotolerance regulator N-terminal WM43_RS01245 PF17863 AAA lid domain WM43_RS01245 PF07726 ATPase family associated with various cellular activities (AAA) WM43_RS01250 PF00884 Sulfatase WM43_RS01255 PF01966 HD domain WM43_RS01260 PF01743 Poly A polymerase head domain WM43_RS01260 PF02272 DHHA1 domain WM43_RS01260 PF01368 DHH family WM43_RS01260 PF00571 CBS domain WM43_RS01265 PF00270 DEAD/DEAH box helicase WM43_RS01265 PF11898 Domain of unknown function (DUF3418) WM43_RS01265 PF04408 Helicase associated domain (HA2) WM43_RS01265 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold WM43_RS01265 PF00271 Helicase conserved C-terminal domain WM43_RS01275 PF01386 Ribosomal L25p family WM43_RS01280 PF00376 MerR family regulatory protein WM43_RS01280 PF09278 MerR, DNA binding WM43_RS01285 PF02803 Thiolase, C-terminal domain WM43_RS01285 PF00108 Thiolase, N-terminal domain WM43_RS01290 PF00563 EAL domain WM43_RS01290 PF08668 HDOD domain WM43_RS01295 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) WM43_RS01300 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) WM43_RS01310 PF04542 Sigma-70 region 2 WM43_RS01310 PF08281 Sigma-70, region 4 WM43_RS01320 PF13519 von Willebrand factor type A domain WM43_RS01335 PF01882 Protein of unknown function DUF58 WM43_RS01340 PF07726 ATPase family associated with various cellular activities (AAA) WM43_RS01340 PF17863 AAA lid domain WM43_RS01345 PF00108 Thiolase, N-terminal domain WM43_RS01345 PF02803 Thiolase, C-terminal domain WM43_RS01350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WM43_RS01350 PF00378 Enoyl-CoA hydratase/isomerase WM43_RS01350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WM43_RS01355 PF04293 SpoVR like protein WM43_RS01360 PF04285 Protein of unknown function (DUF444) WM43_RS01365 PF06798 PrkA serine protein kinase C-terminal domain WM43_RS01365 PF08298 PrkA AAA domain WM43_RS01370 PF09382 RQC domain WM43_RS01370 PF00271 Helicase conserved C-terminal domain WM43_RS01370 PF00270 DEAD/DEAH box helicase WM43_RS01370 PF00570 HRDC domain WM43_RS01370 PF16124 RecQ zinc-binding WM43_RS01375 PF00375 Sodium:dicarboxylate symporter family WM43_RS01380 PF03222 Tryptophan/tyrosine permease family WM43_RS01385 PF00293 NUDIX domain WM43_RS01390 PF04715 Anthranilate synthase component I, N terminal region WM43_RS01390 PF00425 chorismate binding enzyme WM43_RS01400 PF08274 PhnA Zinc-Ribbon WM43_RS01400 PF03831 PhnA domain WM43_RS01410 PF08329 Chitinase A, N-terminal domain WM43_RS01410 PF00704 Glycosyl hydrolases family 18 WM43_RS01420 PF00300 Histidine phosphatase superfamily (branch 1) WM43_RS01425 PF08448 PAS fold WM43_RS01425 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS01430 PF01713 Smr domain WM43_RS01435 PF05175 Methyltransferase small domain WM43_RS01440 PF01264 Chorismate synthase WM43_RS01450 PF00271 Helicase conserved C-terminal domain WM43_RS01450 PF00270 DEAD/DEAH box helicase WM43_RS01460 PF01124 MAPEG family WM43_RS01470 PF03222 Tryptophan/tyrosine permease family WM43_RS01475 PF00356 Bacterial regulatory proteins, lacI family WM43_RS01475 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family WM43_RS01480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 WM43_RS01480 PF00381 PTS HPr component phosphorylation site WM43_RS01485 PF00294 pfkB family carbohydrate kinase WM43_RS01490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit WM43_RS01490 PF02378 Phosphotransferase system, EIIC WM43_RS01495 PF12111 Polyribonucleotide phosphorylase C terminal WM43_RS01495 PF10150 Ribonuclease E/G family WM43_RS01495 PF00575 S1 RNA binding domain WM43_RS01500 PF00849 RNA pseudouridylate synthase WM43_RS01500 PF01479 S4 domain WM43_RS01505 PF13419 Haloacid dehalogenase-like hydrolase WM43_RS01510 PF02545 Maf-like protein WM43_RS01515 PF02620 Large ribosomal RNA subunit accumulation protein YceD WM43_RS01520 PF01783 Ribosomal L32p protein family WM43_RS01525 PF02504 Fatty acid synthesis protein WM43_RS01530 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WM43_RS01530 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WM43_RS01535 PF00698 Acyl transferase domain WM43_RS01545 PF00550 Phosphopantetheine attachment site WM43_RS01550 PF02801 Beta-ketoacyl synthase, C-terminal domain WM43_RS01550 PF00109 Beta-ketoacyl synthase, N-terminal domain WM43_RS01555 PF01063 Amino-transferase class IV WM43_RS01560 PF02618 YceG-like family WM43_RS01565 PF02223 Thymidylate kinase WM43_RS01570 PF09115 DNA polymerase III, delta subunit, C terminal WM43_RS01575 PF01026 TatD related DNase WM43_RS01580 PF00589 Phage integrase family WM43_RS01590 PF01189 16S rRNA methyltransferase RsmB/F WM43_RS01590 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF WM43_RS01590 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF WM43_RS01595 PF02470 MlaD protein WM43_RS01600 PF04403 Paraquat-inducible protein A WM43_RS01615 PF00285 Citrate synthase, C-terminal domain WM43_RS01620 PF03972 MmgE/PrpD family WM43_RS01635 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain WM43_RS01635 PF06974 Protein of unknown function (DUF1298) WM43_RS01660 PF01609 Transposase DDE domain WM43_RS01660 PF13808 DDE_Tnp_1-associated WM43_RS01665 PF00106 short chain dehydrogenase WM43_RS01670 PF01674 Lipase (class 2) WM43_RS01675 PF07130 YebG protein WM43_RS01695 PF13654 AAA domain WM43_RS01695 PF05362 Lon protease (S16) C-terminal proteolytic domain WM43_RS01700 PF07977 FabA-like domain WM43_RS01705 PF04957 Ribosome modulation factor WM43_RS01710 PF16326 ABC transporter C-terminal domain WM43_RS01710 PF00005 ABC transporter WM43_RS01710 PF12848 ABC transporter WM43_RS01720 PF10672 S-adenosylmethionine-dependent methyltransferase WM43_RS01720 PF02926 THUMP domain WM43_RS01720 PF01170 Putative RNA methylase family UPF0020 WM43_RS01725 PF00444 Ribosomal protein L36 WM43_RS01730 PF01197 Ribosomal protein L31 WM43_RS01740 PF07126 Cell-division protein ZapC WM43_RS01745 PF01180 Dihydroorotate dehydrogenase WM43_RS01750 PF05088 Bacterial NAD-glutamate dehydrogenase WM43_RS01760 PF11940 Domain of unknown function (DUF3458) Ig-like fold WM43_RS01760 PF01433 Peptidase family M1 domain WM43_RS01760 PF17432 Domain of unknown function (DUF3458_C) ARM repeats WM43_RS01765 PF03572 Peptidase family S41 WM43_RS01765 PF11818 C-terminal domain of tail specific protease (DUF3340) WM43_RS01765 PF17804 Tail specific protease N-terminal domain WM43_RS01765 PF00595 PDZ domain WM43_RS01770 PF17516 ProQ C-terminal domain WM43_RS01770 PF04352 ProQ/FINO family WM43_RS01775 PF13185 GAF domain WM43_RS01785 PF00115 Cytochrome C and Quinol oxidase polypeptide I WM43_RS01800 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WM43_RS01800 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP WM43_RS01810 PF00403 Heavy-metal-associated domain WM43_RS01825 PF13545 Crp-like helix-turn-helix domain WM43_RS01825 PF00027 Cyclic nucleotide-binding domain WM43_RS01830 PF00582 Universal stress protein family WM43_RS01835 PF01171 PP-loop family WM43_RS01850 PF00005 ABC transporter WM43_RS01850 PF08402 TOBE domain WM43_RS01855 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS01860 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS01865 PF13416 Bacterial extracellular solute-binding protein WM43_RS01875 PF13417 Glutathione S-transferase, N-terminal domain WM43_RS01880 PF05025 RbsD / FucU transport protein family WM43_RS01885 PF00005 ABC transporter WM43_RS01890 PF02653 Branched-chain amino acid transport system / permease component WM43_RS01895 PF13407 Periplasmic binding protein domain WM43_RS01900 PF00294 pfkB family carbohydrate kinase WM43_RS01905 PF00356 Bacterial regulatory proteins, lacI family WM43_RS01910 PF00563 EAL domain WM43_RS01910 PF03707 Bacterial signalling protein N terminal repeat WM43_RS01910 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS01920 PF02146 Sir2 family WM43_RS01935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS01935 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS01935 PF09456 RcsC Alpha-Beta-Loop (ABL) WM43_RS01935 PF00072 Response regulator receiver domain WM43_RS01940 PF00216 Bacterial DNA-binding protein WM43_RS01945 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain WM43_RS01945 PF03147 Ferredoxin-fold anticodon binding domain WM43_RS01945 PF03484 tRNA synthetase B5 domain WM43_RS01945 PF03483 B3/4 domain WM43_RS01945 PF01588 Putative tRNA binding domain WM43_RS01950 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain WM43_RS01950 PF01409 tRNA synthetases class II core domain (F) WM43_RS01955 PF00453 Ribosomal protein L20 WM43_RS01960 PF01632 Ribosomal protein L35 WM43_RS01965 PF05198 Translation initiation factor IF-3, N-terminal domain WM43_RS01965 PF00707 Translation initiation factor IF-3, C-terminal domain WM43_RS01970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WM43_RS01970 PF03129 Anticodon binding domain WM43_RS01970 PF02824 TGS domain WM43_RS01970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WM43_RS01980 PF04055 Radical SAM superfamily WM43_RS01985 PF00128 Alpha amylase, catalytic domain WM43_RS01990 PF00521 DNA gyrase/topoisomerase IV, subunit A WM43_RS01990 PF03989 DNA gyrase C-terminal domain, beta-propeller WM43_RS02000 PF13419 Haloacid dehalogenase-like hydrolase WM43_RS02005 PF00317 Ribonucleotide reductase, all-alpha domain WM43_RS02005 PF02867 Ribonucleotide reductase, barrel domain WM43_RS02005 PF03477 ATP cone domain WM43_RS02010 PF00268 Ribonucleotide reductase, small chain WM43_RS02015 PF00111 2Fe-2S iron-sulfur cluster binding domain WM43_RS02020 PF03562 MltA specific insert domain WM43_RS02020 PF06725 3D domain WM43_RS02025 PF06945 Protein of unknown function (DUF1289) WM43_RS02035 PF03613 PTS system mannose/fructose/sorbose family IID component WM43_RS02040 PF03609 PTS system sorbose-specific iic component WM43_RS02045 PF03830 PTS system sorbose subfamily IIB component WM43_RS02045 PF03610 PTS system fructose IIA component WM43_RS02060 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family WM43_RS02060 PF00356 Bacterial regulatory proteins, lacI family WM43_RS02065 PF06560 Glucose-6-phosphate isomerase (GPI) WM43_RS02070 PF01384 Phosphate transporter family WM43_RS02075 PF00692 dUTPase WM43_RS02080 PF00485 Phosphoribulokinase / Uridine kinase family WM43_RS02085 PF10609 NUBPL iron-transfer P-loop NTPase WM43_RS02090 PF08264 Anticodon-binding domain of tRNA WM43_RS02090 PF01588 Putative tRNA binding domain WM43_RS02090 PF09334 tRNA synthetases class I (M) WM43_RS02100 PF00708 Acylphosphatase WM43_RS02105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS02105 PF00672 HAMP domain WM43_RS02110 PF07196 Flagellin hook IN motif WM43_RS02110 PF00700 Bacterial flagellin C-terminal helical region WM43_RS02110 PF00669 Bacterial flagellin N-terminal helical region WM43_RS02115 PF10672 S-adenosylmethionine-dependent methyltransferase WM43_RS02115 PF17785 PUA-like domain WM43_RS02130 PF02769 AIR synthase related protein, C-terminal domain WM43_RS02130 PF00586 AIR synthase related protein, N-terminal domain WM43_RS02140 PF00753 Metallo-beta-lactamase superfamily WM43_RS02150 PF00570 HRDC domain WM43_RS02150 PF01612 3'-5' exonuclease WM43_RS02155 PF00501 AMP-binding enzyme WM43_RS02155 PF13193 AMP-binding enzyme C-terminal domain WM43_RS02160 PF12697 Alpha/beta hydrolase family WM43_RS02170 PF00814 Glycoprotease family WM43_RS02175 PF04851 Type III restriction enzyme, res subunit WM43_RS02175 PF13307 Helicase C-terminal domain WM43_RS02185 PF08029 HisG, C-terminal domain WM43_RS02185 PF01634 ATP phosphoribosyltransferase WM43_RS02190 PF00815 Histidinol dehydrogenase WM43_RS02195 PF00155 Aminotransferase class I and II WM43_RS02200 PF08645 Polynucleotide kinase 3 phosphatase WM43_RS02200 PF00475 Imidazoleglycerol-phosphate dehydratase WM43_RS02205 PF00117 Glutamine amidotransferase class-I WM43_RS02210 PF00977 Histidine biosynthesis protein WM43_RS02215 PF00977 Histidine biosynthesis protein WM43_RS02220 PF01502 Phosphoribosyl-AMP cyclohydrolase WM43_RS02220 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase WM43_RS02230 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS02230 PF08448 PAS fold WM43_RS02235 PF13193 AMP-binding enzyme C-terminal domain WM43_RS02235 PF00501 AMP-binding enzyme WM43_RS02240 PF03606 C4-dicarboxylate anaerobic carrier WM43_RS02255 PF05433 Glycine zipper 2TM domain WM43_RS02260 PF01799 [2Fe-2S] binding domain WM43_RS02260 PF00111 2Fe-2S iron-sulfur cluster binding domain WM43_RS02265 PF03450 CO dehydrogenase flavoprotein C-terminal domain WM43_RS02265 PF00941 FAD binding domain in molybdopterin dehydrogenase WM43_RS02270 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase WM43_RS02270 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WM43_RS02275 PF00860 Permease family WM43_RS02280 PF01979 Amidohydrolase family WM43_RS02285 PF00860 Permease family WM43_RS02290 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase WM43_RS02290 PF01799 [2Fe-2S] binding domain WM43_RS02290 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WM43_RS02295 PF00941 FAD binding domain in molybdopterin dehydrogenase WM43_RS02300 PF01979 Amidohydrolase family WM43_RS02305 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster WM43_RS02305 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM43_RS02310 PF12804 MobA-like NTP transferase domain WM43_RS02320 PF13478 XdhC Rossmann domain WM43_RS02320 PF02625 XdhC and CoxI family WM43_RS02325 PF00892 EamA-like transporter family WM43_RS02330 PF01497 Periplasmic binding protein WM43_RS02335 PF01032 FecCD transport family WM43_RS02340 PF00005 ABC transporter WM43_RS02345 PF07690 Major Facilitator Superfamily WM43_RS02350 PF00696 Amino acid kinase family WM43_RS02355 PF01979 Amidohydrolase family WM43_RS02360 PF07687 Peptidase dimerisation domain WM43_RS02360 PF01546 Peptidase family M20/M25/M40 WM43_RS02365 PF00291 Pyridoxal-phosphate dependent enzyme WM43_RS02370 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WM43_RS02370 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WM43_RS02400 PF01327 Polypeptide deformylase WM43_RS02410 PF01965 DJ-1/PfpI family WM43_RS02420 PF03330 Lytic transglycolase WM43_RS02425 PF16330 MukB hinge domain WM43_RS02425 PF04310 MukB N-terminal WM43_RS02430 PF04288 MukE-like family WM43_RS02435 PF03882 MukF winged-helix domain WM43_RS02435 PF17192 MukF middle domain WM43_RS02435 PF17193 MukF C-terminal domain WM43_RS02440 PF13847 Methyltransferase domain WM43_RS02445 PF02698 DUF218 domain WM43_RS02450 PF00121 Triosephosphate isomerase WM43_RS02455 PF00365 Phosphofructokinase WM43_RS02460 PF00375 Sodium:dicarboxylate symporter family WM43_RS02465 PF06865 Pyrimidine/purine nucleoside phosphorylase WM43_RS02470 PF03315 Serine dehydratase beta chain WM43_RS02470 PF03313 Serine dehydratase alpha chain WM43_RS02475 PF03313 Serine dehydratase alpha chain WM43_RS02475 PF03315 Serine dehydratase beta chain WM43_RS02480 PF05166 YcgL domain WM43_RS02485 PF05209 Septum formation inhibitor MinC, N-terminal domain WM43_RS02485 PF03775 Septum formation inhibitor MinC, C-terminal domain WM43_RS02490 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain WM43_RS02495 PF03776 Septum formation topological specificity factor MinE WM43_RS02500 PF04269 Protein of unknown function, DUF440 WM43_RS02505 PF00912 Transglycosylase WM43_RS02510 PF04269 Protein of unknown function, DUF440 WM43_RS02520 PF13509 S1 domain WM43_RS02520 PF17783 CvfB-like winged helix domain WM43_RS02545 PF02525 Flavodoxin-like fold WM43_RS02550 PF00892 EamA-like transporter family WM43_RS02555 PF02222 ATP-grasp domain WM43_RS02555 PF01370 NAD dependent epimerase/dehydratase family WM43_RS02560 PF13419 Haloacid dehalogenase-like hydrolase WM43_RS02570 PF00677 Lumazine binding domain WM43_RS02580 PF06786 Uncharacterised protein family (UPF0253) WM43_RS02585 PF01554 MatE WM43_RS02615 PF00158 Sigma-54 interaction domain WM43_RS02615 PF13188 PAS domain WM43_RS02615 PF02954 Bacterial regulatory protein, Fis family WM43_RS02630 PF07152 YaeQ protein WM43_RS02640 PF00392 Bacterial regulatory proteins, gntR family WM43_RS02640 PF07840 FadR C-terminal domain WM43_RS02645 PF06450 Bacterial Na+/H+ antiporter B (NhaB) WM43_RS02650 PF02600 Disulfide bond formation protein DsbB WM43_RS02655 PF09335 SNARE associated Golgi protein WM43_RS02665 PF02151 UvrB/uvrC motif WM43_RS02665 PF04851 Type III restriction enzyme, res subunit WM43_RS02665 PF12344 Ultra-violet resistance protein B WM43_RS02665 PF00271 Helicase conserved C-terminal domain WM43_RS02665 PF17757 UvrB interaction domain WM43_RS02675 PF06826 Predicted Permease Membrane Region WM43_RS02675 PF02080 TrkA-C domain WM43_RS02680 PF02801 Beta-ketoacyl synthase, C-terminal domain WM43_RS02680 PF00109 Beta-ketoacyl synthase, N-terminal domain WM43_RS02685 PF01266 FAD dependent oxidoreductase WM43_RS02685 PF05430 S-adenosyl-L-methionine-dependent methyltransferase WM43_RS02700 PF03606 C4-dicarboxylate anaerobic carrier WM43_RS02715 PF01863 Protein of unknown function DUF45 WM43_RS02730 PF00136 DNA polymerase family B WM43_RS02730 PF03104 DNA polymerase family B, exonuclease domain WM43_RS02740 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS02755 PF03279 Bacterial lipid A biosynthesis acyltransferase WM43_RS02760 PF03279 Bacterial lipid A biosynthesis acyltransferase WM43_RS02770 PF03466 LysR substrate binding domain WM43_RS02770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS02775 PF01261 Xylose isomerase-like TIM barrel WM43_RS02780 PF02575 YbaB/EbfC DNA-binding family WM43_RS02785 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding WM43_RS02785 PF12170 DNA polymerase III tau subunit V interacting with alpha WM43_RS02785 PF12169 DNA polymerase III subunits gamma and tau domain III WM43_RS02790 PF00156 Phosphoribosyl transferase domain WM43_RS02795 PF04304 Protein of unknown function (DUF454) WM43_RS02800 PF01207 Dihydrouridine synthase (Dus) WM43_RS02815 PF13419 Haloacid dehalogenase-like hydrolase WM43_RS02820 PF02789 Cytosol aminopeptidase family, N-terminal domain WM43_RS02820 PF00883 Cytosol aminopeptidase family, catalytic domain WM43_RS02860 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) WM43_RS02860 PF00128 Alpha amylase, catalytic domain WM43_RS02870 PF11398 Protein of unknown function (DUF2813) WM43_RS02875 PF12833 Helix-turn-helix domain WM43_RS02875 PF14525 AraC-binding-like domain WM43_RS02885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS02885 PF03466 LysR substrate binding domain WM43_RS02890 PF01925 Sulfite exporter TauE/SafE WM43_RS02895 PF03942 DTW domain WM43_RS02900 PF00480 ROK family WM43_RS02900 PF01047 MarR family WM43_RS02905 PF00672 HAMP domain WM43_RS02905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS02905 PF17200 Single Cache domain 2 WM43_RS02910 PF02810 SEC-C motif WM43_RS02915 PF04324 BFD-like [2Fe-2S] binding domain WM43_RS02915 PF01266 FAD dependent oxidoreductase WM43_RS02920 PF00890 FAD binding domain WM43_RS02925 PF02754 Cysteine-rich domain WM43_RS02925 PF13183 4Fe-4S dicluster domain WM43_RS02935 PF02335 Cytochrome c552 WM43_RS02940 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) WM43_RS02940 PF13435 Cytochrome c554 and c-prime WM43_RS02945 PF13247 4Fe-4S dicluster domain WM43_RS02945 PF00037 4Fe-4S binding domain WM43_RS02950 PF03916 Polysulphide reductase, NrfD WM43_RS02955 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal WM43_RS02955 PF01578 Cytochrome C assembly protein WM43_RS02960 PF08534 Redoxin WM43_RS02965 PF03918 Cytochrome C biogenesis protein WM43_RS02985 PF00202 Aminotransferase class-III WM43_RS02990 PF00266 Aminotransferase class-V WM43_RS02995 PF07702 UTRA domain WM43_RS02995 PF00392 Bacterial regulatory proteins, gntR family WM43_RS03005 PF00005 ABC transporter WM43_RS03010 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS03015 PF01266 FAD dependent oxidoreductase WM43_RS03025 PF06167 Glucose-regulated metallo-peptidase M90 WM43_RS03035 PF01235 Sodium:alanine symporter family WM43_RS03070 PF00378 Enoyl-CoA hydratase/isomerase WM43_RS03085 PF04341 Protein of unknown function, DUF485 WM43_RS03090 PF00474 Sodium:solute symporter family WM43_RS03095 PF12848 ABC transporter WM43_RS03095 PF00005 ABC transporter WM43_RS03100 PF13145 PPIC-type PPIASE domain WM43_RS03105 PF00216 Bacterial DNA-binding protein WM43_RS03110 PF05362 Lon protease (S16) C-terminal proteolytic domain WM43_RS03110 PF02190 ATP-dependent protease La (LON) substrate-binding domain WM43_RS03110 PF00004 ATPase family associated with various cellular activities (AAA) WM43_RS03115 PF07724 AAA domain (Cdc48 subfamily) WM43_RS03115 PF10431 C-terminal, D2-small domain, of ClpB protein WM43_RS03115 PF06689 ClpX C4-type zinc finger WM43_RS03120 PF00574 Clp protease WM43_RS03125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WM43_RS03125 PF05697 Bacterial trigger factor protein (TF) WM43_RS03125 PF05698 Bacterial trigger factor protein (TF) C-terminus WM43_RS03140 PF02687 FtsX-like permease family WM43_RS03140 PF12704 MacB-like periplasmic core domain WM43_RS03145 PF00005 ABC transporter WM43_RS03150 PF02687 FtsX-like permease family WM43_RS03150 PF12704 MacB-like periplasmic core domain WM43_RS03160 PF17757 UvrB interaction domain WM43_RS03160 PF00271 Helicase conserved C-terminal domain WM43_RS03160 PF00270 DEAD/DEAH box helicase WM43_RS03160 PF03461 TRCF domain WM43_RS03160 PF02559 CarD-like/TRCF domain WM43_RS03165 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain WM43_RS03170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WM43_RS03175 PF00892 EamA-like transporter family WM43_RS03185 PF00300 Histidine phosphatase superfamily (branch 1) WM43_RS03190 PF00675 Insulinase (Peptidase family M16) WM43_RS03190 PF16187 Middle or third domain of peptidase_M16 WM43_RS03190 PF05193 Peptidase M16 inactive domain WM43_RS03195 PF05724 Thiopurine S-methyltransferase (TPMT) WM43_RS03210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain WM43_RS03210 PF12833 Helix-turn-helix domain WM43_RS03210 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain WM43_RS03210 PF02805 Metal binding domain of Ada WM43_RS03220 PF07693 KAP family P-loop domain WM43_RS03230 PF00958 GMP synthase C terminal domain WM43_RS03230 PF02540 NAD synthase WM43_RS03230 PF00117 Glutamine amidotransferase class-I WM43_RS03235 PF00478 IMP dehydrogenase / GMP reductase domain WM43_RS03235 PF00571 CBS domain WM43_RS03240 PF01292 Prokaryotic cytochrome b561 WM43_RS03245 PF13742 OB-fold nucleic acid binding domain WM43_RS03245 PF02601 Exonuclease VII, large subunit WM43_RS03250 PF07702 UTRA domain WM43_RS03250 PF00392 Bacterial regulatory proteins, gntR family WM43_RS03255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit WM43_RS03255 PF02378 Phosphotransferase system, EIIC WM43_RS03255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 WM43_RS03260 PF01074 Glycosyl hydrolases family 38 N-terminal domain WM43_RS03260 PF07748 Glycosyl hydrolases family 38 C-terminal domain WM43_RS03260 PF09261 Alpha mannosidase middle domain WM43_RS03265 PF07478 D-ala D-ala ligase C-terminus WM43_RS03265 PF01820 D-ala D-ala ligase N-terminus WM43_RS03275 PF00255 Glutathione peroxidase WM43_RS03280 PF00270 DEAD/DEAH box helicase WM43_RS03280 PF00271 Helicase conserved C-terminal domain WM43_RS03285 PF04055 Radical SAM superfamily WM43_RS03290 PF00672 HAMP domain WM43_RS03290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS03295 PF00793 DAHP synthetase I family WM43_RS03300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WM43_RS03305 PF00266 Aminotransferase class-V WM43_RS03310 PF01012 Electron transfer flavoprotein domain WM43_RS03310 PF00766 Electron transfer flavoprotein FAD-binding domain WM43_RS03315 PF01012 Electron transfer flavoprotein domain WM43_RS03325 PF01544 CorA-like Mg2+ transporter protein WM43_RS03330 PF11143 Protein of unknown function (DUF2919) WM43_RS03340 PF07273 Protein of unknown function (DUF1439) WM43_RS03350 PF00483 Nucleotidyl transferase WM43_RS03355 PF03707 Bacterial signalling protein N terminal repeat WM43_RS03355 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS03355 PF00563 EAL domain WM43_RS03370 PF00294 pfkB family carbohydrate kinase WM43_RS03380 PF00762 Ferrochelatase WM43_RS03385 PF05191 Adenylate kinase, active site lid WM43_RS03390 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) WM43_RS03395 PF00156 Phosphoribosyl transferase domain WM43_RS03400 PF02674 Colicin V production protein WM43_RS03405 PF02403 Seryl-tRNA synthetase N-terminal domain WM43_RS03405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WM43_RS03410 PF00004 ATPase family associated with various cellular activities (AAA) WM43_RS03410 PF12002 MgsA AAA+ ATPase C terminal WM43_RS03410 PF16193 AAA C-terminal domain WM43_RS03415 PF03548 Outer membrane lipoprotein carrier protein LolA WM43_RS03420 PF01580 FtsK/SpoIIIE family WM43_RS03420 PF17854 FtsK alpha domain WM43_RS03420 PF09397 Ftsk gamma domain WM43_RS03420 PF13491 4TM region of DNA translocase FtsK/SpoIIIE WM43_RS03425 PF01037 Lrp/AsnC ligand binding domain WM43_RS03430 PF01262 Alanine dehydrogenase/PNT, C-terminal domain WM43_RS03430 PF05222 Alanine dehydrogenase/PNT, N-terminal domain WM43_RS03435 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM43_RS03440 PF17158 Membrane-associated sensor, integral membrane domain WM43_RS03440 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS03445 PF05433 Glycine zipper 2TM domain WM43_RS03450 PF03588 Leucyl/phenylalanyl-tRNA protein transferase WM43_RS03455 PF04377 Arginine-tRNA-protein transferase, C terminus WM43_RS03455 PF04376 Arginine-tRNA-protein transferase, N terminus WM43_RS03460 PF01176 Translation initiation factor 1A / IF-1 WM43_RS03465 PF00004 ATPase family associated with various cellular activities (AAA) WM43_RS03465 PF07724 AAA domain (Cdc48 subfamily) WM43_RS03465 PF17871 AAA lid domain WM43_RS03465 PF02861 Clp amino terminal domain, pathogenicity island component WM43_RS03465 PF10431 C-terminal, D2-small domain, of ClpB protein WM43_RS03470 PF02617 ATP-dependent Clp protease adaptor protein ClpS WM43_RS03475 PF00313 'Cold-shock' DNA-binding domain WM43_RS03480 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain WM43_RS03480 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain WM43_RS03530 PF01609 Transposase DDE domain WM43_RS03530 PF13808 DDE_Tnp_1-associated WM43_RS03535 PF13808 DDE_Tnp_1-associated WM43_RS03535 PF01609 Transposase DDE domain WM43_RS03540 PF00465 Iron-containing alcohol dehydrogenase WM43_RS03545 PF02288 Dehydratase medium subunit WM43_RS03550 PF13808 DDE_Tnp_1-associated WM43_RS03550 PF01609 Transposase DDE domain WM43_RS03560 PF13808 DDE_Tnp_1-associated WM43_RS03560 PF01609 Transposase DDE domain WM43_RS03565 PF00158 Sigma-54 interaction domain WM43_RS03565 PF02954 Bacterial regulatory protein, Fis family WM43_RS03565 PF00989 PAS fold WM43_RS03570 PF00465 Iron-containing alcohol dehydrogenase WM43_RS03575 PF05524 PEP-utilising enzyme, N-terminal WM43_RS03575 PF00381 PTS HPr component phosphorylation site WM43_RS03575 PF03610 PTS system fructose IIA component WM43_RS03575 PF00391 PEP-utilising enzyme, mobile domain WM43_RS03580 PF02734 DAK2 domain WM43_RS03585 PF02733 Dak1 domain WM43_RS03590 PF00860 Permease family WM43_RS03600 PF01527 Transposase WM43_RS03620 PF17760 UvrA interaction domain WM43_RS03620 PF00005 ABC transporter WM43_RS03620 PF17755 UvrA DNA-binding domain WM43_RS03640 PF03783 Curli production assembly/transport component CsgG WM43_RS03650 PF10627 Curli assembly protein CsgE WM43_RS03655 PF00196 Bacterial regulatory proteins, luxR family WM43_RS03665 PF01527 Transposase WM43_RS03675 PF05598 Transposase domain (DUF772) WM43_RS03675 PF01609 Transposase DDE domain WM43_RS03750 PF07804 HipA-like C-terminal domain WM43_RS03750 PF13657 HipA N-terminal domain WM43_RS03765 PF00486 Transcriptional regulatory protein, C terminal WM43_RS03765 PF00072 Response regulator receiver domain WM43_RS03770 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS03770 PF00672 HAMP domain WM43_RS03770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS03780 PF09924 Uncharacterised conserved protein (DUF2156) WM43_RS03780 PF03706 Lysylphosphatidylglycerol synthase TM region WM43_RS03795 PF02384 N-6 DNA Methylase WM43_RS03795 PF12161 HsdM N-terminal domain WM43_RS03805 PF02810 SEC-C motif WM43_RS03805 PF03695 Uncharacterised protein family (UPF0149) WM43_RS03810 PF07728 AAA domain (dynein-related subfamily) WM43_RS03810 PF12592 Protein of unknown function (DUF3763) WM43_RS03810 PF17868 AAA lid domain WM43_RS03815 PF05762 VWA domain containing CoxE-like protein WM43_RS03820 PF11867 Domain of unknown function (DUF3387) WM43_RS03820 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) WM43_RS03820 PF18766 SWI2/SNF2 ATPase WM43_RS03835 PF01609 Transposase DDE domain WM43_RS03835 PF05598 Transposase domain (DUF772) WM43_RS03840 PF13737 Transposase DDE domain WM43_RS03845 PF13737 Transposase DDE domain WM43_RS03850 PF03707 Bacterial signalling protein N terminal repeat WM43_RS03850 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS03850 PF00563 EAL domain WM43_RS03860 PF05230 MASE2 domain WM43_RS03860 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS03900 PF01740 STAS domain WM43_RS03900 PF00916 Sulfate permease family WM43_RS03915 PF00589 Phage integrase family WM43_RS03915 PF13356 Arm DNA-binding domain WM43_RS03945 PF01609 Transposase DDE domain WM43_RS03945 PF13808 DDE_Tnp_1-associated WM43_RS03960 PF05598 Transposase domain (DUF772) WM43_RS03960 PF01609 Transposase DDE domain WM43_RS03980 PF01555 DNA methylase WM43_RS03980 PF18273 Type III R-M EcoP15I C-terminal domain WM43_RS03985 PF08774 VRR-NUC domain WM43_RS03985 PF04851 Type III restriction enzyme, res subunit WM43_RS04015 PF11798 IMS family HHH motif WM43_RS04015 PF11799 impB/mucB/samB family C-terminal domain WM43_RS04015 PF00817 impB/mucB/samB family WM43_RS04015 PF13438 Domain of unknown function (DUF4113) WM43_RS04020 PF00717 Peptidase S24-like WM43_RS04040 PF00266 Aminotransferase class-V WM43_RS04065 PF03239 Iron permease FTR1 family WM43_RS04070 PF01593 Flavin containing amine oxidoreductase WM43_RS04085 PF07690 Major Facilitator Superfamily WM43_RS04090 PF03600 Citrate transporter WM43_RS04100 PF00005 ABC transporter WM43_RS04105 PF02687 FtsX-like permease family WM43_RS04105 PF12704 MacB-like periplasmic core domain WM43_RS04125 PF00561 alpha/beta hydrolase fold WM43_RS04145 PF01625 Peptide methionine sulfoxide reductase WM43_RS04150 PF00583 Acetyltransferase (GNAT) family WM43_RS04150 PF00696 Amino acid kinase family WM43_RS04155 PF01842 ACT domain WM43_RS04155 PF00696 Amino acid kinase family WM43_RS04165 PF00884 Sulfatase WM43_RS04170 PF02016 LD-carboxypeptidase N-terminal domain WM43_RS04170 PF17676 LD-carboxypeptidase C-terminal domain WM43_RS04175 PF01734 Patatin-like phospholipase WM43_RS04180 PF17179 4Fe-4S dicluster domain WM43_RS04185 PF00175 Oxidoreductase NAD-binding domain WM43_RS04185 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B WM43_RS04190 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain WM43_RS04190 PF01077 Nitrite and sulphite reductase 4Fe-4S domain WM43_RS04190 PF13187 4Fe-4S dicluster domain WM43_RS04195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WM43_RS04195 PF14824 Sirohaem biosynthesis protein central WM43_RS04195 PF10414 Sirohaem synthase dimerisation region WM43_RS04205 PF01906 Putative heavy-metal-binding WM43_RS04210 PF05036 Sporulation related domain WM43_RS04215 PF08245 Mur ligase middle domain WM43_RS04215 PF02875 Mur ligase family, glutamate ligase domain WM43_RS04220 PF01039 Carboxyl transferase domain WM43_RS04220 PF17848 Acetyl-coA carboxylase zinc finger domain WM43_RS04225 PF01416 tRNA pseudouridine synthase WM43_RS04235 PF02774 Semialdehyde dehydrogenase, dimerisation domain WM43_RS04235 PF01118 Semialdehyde dehydrogenase, NAD binding domain WM43_RS04240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WM43_RS04240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WM43_RS04240 PF11890 Domain of unknown function (DUF3410) WM43_RS04245 PF01569 PAP2 superfamily WM43_RS04250 PF00929 Exonuclease WM43_RS04255 PF03553 Na+/H+ antiporter family WM43_RS04255 PF13726 Na+-H+ antiporter family WM43_RS04260 PF00563 EAL domain WM43_RS04260 PF13188 PAS domain WM43_RS04260 PF03707 Bacterial signalling protein N terminal repeat WM43_RS04260 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS04270 PF03880 DbpA RNA binding domain WM43_RS04270 PF00270 DEAD/DEAH box helicase WM43_RS04270 PF00271 Helicase conserved C-terminal domain WM43_RS04275 PF03061 Thioesterase superfamily WM43_RS04285 PF02913 FAD linked oxidases, C-terminal domain WM43_RS04285 PF01565 FAD binding domain WM43_RS04285 PF13183 4Fe-4S dicluster domain WM43_RS04295 PF03471 Transporter associated domain WM43_RS04295 PF03741 Integral membrane protein TerC family WM43_RS04300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WM43_RS04305 PF14765 Polyketide synthase dehydratase WM43_RS04305 PF00698 Acyl transferase domain WM43_RS04305 PF00109 Beta-ketoacyl synthase, N-terminal domain WM43_RS04305 PF16197 Ketoacyl-synthetase C-terminal extension WM43_RS04305 PF02801 Beta-ketoacyl synthase, C-terminal domain WM43_RS04305 PF08659 KR domain WM43_RS04305 PF00550 Phosphopantetheine attachment site WM43_RS04305 PF08240 Alcohol dehydrogenase GroES-like domain WM43_RS04310 PF00962 Adenosine/AMP deaminase WM43_RS04315 PF13344 Haloacid dehalogenase-like hydrolase WM43_RS04320 PF00999 Sodium/hydrogen exchanger family WM43_RS04320 PF02254 TrkA-N domain WM43_RS04330 PF13537 Glutamine amidotransferase domain WM43_RS04330 PF00733 Asparagine synthase WM43_RS04355 PF01066 CDP-alcohol phosphatidyltransferase WM43_RS04360 PF08459 UvrC Helix-hairpin-helix N-terminal WM43_RS04360 PF01541 GIY-YIG catalytic domain WM43_RS04360 PF02151 UvrB/uvrC motif WM43_RS04365 PF00072 Response regulator receiver domain WM43_RS04365 PF00196 Bacterial regulatory proteins, luxR family WM43_RS04370 PF02348 Cytidylyltransferase WM43_RS04375 PF03966 Trm112p-like protein WM43_RS04380 PF02606 Tetraacyldisaccharide-1-P 4'-kinase WM43_RS04385 PF00664 ABC transporter transmembrane region WM43_RS04385 PF00005 ABC transporter WM43_RS04390 PF00753 Metallo-beta-lactamase superfamily WM43_RS04390 PF03772 Competence protein WM43_RS04405 PF00155 Aminotransferase class I and II WM43_RS04415 PF03466 LysR substrate binding domain WM43_RS04415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS04420 PF04219 Protein of unknown function, DUF WM43_RS04425 PF03974 Ecotin WM43_RS04430 PF03009 Glycerophosphoryl diester phosphodiesterase family WM43_RS04435 PF16901 C-terminal domain of alpha-glycerophosphate oxidase WM43_RS04435 PF01266 FAD dependent oxidoreductase WM43_RS04440 PF00455 DeoR C terminal sensor domain WM43_RS04440 PF08220 DeoR-like helix-turn-helix domain WM43_RS04445 PF07690 Major Facilitator Superfamily WM43_RS04450 PF00230 Major intrinsic protein WM43_RS04455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain WM43_RS04455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain WM43_RS04470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS04470 PF03466 LysR substrate binding domain WM43_RS04490 PF00248 Aldo/keto reductase family WM43_RS04500 PF07690 Major Facilitator Superfamily WM43_RS04505 PF02525 Flavodoxin-like fold WM43_RS04520 PF05114 Protein of unknown function (DUF692) WM43_RS04540 PF02322 Cytochrome bd terminal oxidase subunit II WM43_RS04545 PF01654 Cytochrome bd terminal oxidase subunit I WM43_RS04550 PF00392 Bacterial regulatory proteins, gntR family WM43_RS04550 PF00155 Aminotransferase class I and II WM43_RS04560 PF04391 Protein of unknown function (DUF533) WM43_RS04565 PF03061 Thioesterase superfamily WM43_RS04570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS04570 PF03466 LysR substrate binding domain WM43_RS04575 PF07690 Major Facilitator Superfamily WM43_RS04580 PF00849 RNA pseudouridylate synthase WM43_RS04580 PF01479 S4 domain WM43_RS04590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WM43_RS04625 PF02508 Rnf-Nqr subunit, membrane protein WM43_RS04630 PF04060 Putative Fe-S cluster WM43_RS04635 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit WM43_RS04635 PF12838 4Fe-4S dicluster domain WM43_RS04635 PF13375 RnfC Barrel sandwich hybrid domain WM43_RS04635 PF10531 SLBB domain WM43_RS04640 PF03116 NQR2, RnfD, RnfE family WM43_RS04645 PF04205 FMN-binding domain WM43_RS04650 PF02508 Rnf-Nqr subunit, membrane protein WM43_RS04655 PF00730 HhH-GPD superfamily base excision DNA repair protein WM43_RS04655 PF00633 Helix-hairpin-helix motif WM43_RS04655 PF10576 Iron-sulfur binding domain of endonuclease III WM43_RS04660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WM43_RS04665 PF00691 OmpA family WM43_RS04665 PF18393 MotY N-terminal domain WM43_RS04700 PF01609 Transposase DDE domain WM43_RS04700 PF13808 DDE_Tnp_1-associated WM43_RS04705 PF13609 Gram-negative porin WM43_RS04710 PF06733 DEAD_2 WM43_RS04710 PF13307 Helicase C-terminal domain WM43_RS04720 PF00850 Histone deacetylase domain WM43_RS04725 PF01926 50S ribosome-binding GTPase WM43_RS04730 PF00245 Alkaline phosphatase WM43_RS04735 PF00245 Alkaline phosphatase WM43_RS04750 PF01272 Transcription elongation factor, GreA/GreB, C-term WM43_RS04750 PF14760 Rnk N-terminus WM43_RS04755 PF00196 Bacterial regulatory proteins, luxR family WM43_RS04755 PF00072 Response regulator receiver domain WM43_RS04760 PF05231 MASE1 WM43_RS04760 PF07730 Histidine kinase WM43_RS04760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS04765 PF07690 Major Facilitator Superfamily WM43_RS04770 PF08448 PAS fold WM43_RS04770 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS04775 PF00497 Bacterial extracellular solute-binding proteins, family 3 WM43_RS04780 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS04785 PF00005 ABC transporter WM43_RS04795 PF04116 Fatty acid hydroxylase superfamily WM43_RS04800 PF13520 Amino acid permease WM43_RS04805 PF00809 Pterin binding enzyme WM43_RS04805 PF02310 B12 binding domain WM43_RS04805 PF02607 B12 binding domain WM43_RS04805 PF02965 Vitamin B12 dependent methionine synthase, activation domain WM43_RS04805 PF02574 Homocysteine S-methyltransferase WM43_RS04815 PF01595 Cyclin M transmembrane N-terminal domain WM43_RS04815 PF03471 Transporter associated domain WM43_RS04815 PF00571 CBS domain WM43_RS04820 PF01895 PhoU domain WM43_RS04825 PF00005 ABC transporter WM43_RS04830 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS04835 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS04840 PF14437 MafB19-like deaminase WM43_RS04850 PF01274 Malate synthase WM43_RS04855 PF00463 Isocitrate lyase family WM43_RS04860 PF00308 Bacterial dnaA protein WM43_RS04875 PF02769 AIR synthase related protein, C-terminal domain WM43_RS04875 PF00586 AIR synthase related protein, N-terminal domain WM43_RS04880 PF00551 Formyl transferase WM43_RS04885 PF01784 NIF3 (NGG1p interacting factor 3) WM43_RS04890 PF00158 Sigma-54 interaction domain WM43_RS04890 PF00072 Response regulator receiver domain WM43_RS04890 PF02954 Bacterial regulatory protein, Fis family WM43_RS04895 PF13188 PAS domain WM43_RS04895 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS04895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS04900 PF00158 Sigma-54 interaction domain WM43_RS04900 PF02954 Bacterial regulatory protein, Fis family WM43_RS04900 PF06490 Flagellar regulatory protein FleQ WM43_RS04910 PF01842 ACT domain WM43_RS04915 PF17941 Polyphosphate kinase C-terminal domain 1 WM43_RS04915 PF02503 Polyphosphate kinase middle domain WM43_RS04915 PF13090 Polyphosphate kinase C-terminal domain 2 WM43_RS04915 PF13089 Polyphosphate kinase N-terminal domain WM43_RS04920 PF02541 Ppx/GppA phosphatase family WM43_RS04925 PF00571 CBS domain WM43_RS04925 PF01769 Divalent cation transporter WM43_RS04925 PF03448 MgtE intracellular N domain WM43_RS04930 PF00669 Bacterial flagellin N-terminal helical region WM43_RS04935 PF07196 Flagellin hook IN motif WM43_RS04935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WM43_RS04940 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase WM43_RS04940 PF10135 Rod binding protein WM43_RS04945 PF02119 Flagellar P-ring protein WM43_RS04950 PF02107 Flagellar L-ring protein WM43_RS04955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WM43_RS04955 PF00460 Flagella basal body rod protein WM43_RS04960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WM43_RS04960 PF00460 Flagella basal body rod protein WM43_RS04965 PF07559 Flagellar basal body protein FlaE WM43_RS04965 PF00460 Flagella basal body rod protein WM43_RS04965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WM43_RS04975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WM43_RS04975 PF00460 Flagella basal body rod protein WM43_RS04980 PF00460 Flagella basal body rod protein WM43_RS04985 PF03705 CheR methyltransferase, all-alpha domain WM43_RS04985 PF01739 CheR methyltransferase, SAM binding domain WM43_RS04990 PF00072 Response regulator receiver domain WM43_RS04990 PF01584 CheW-like domain WM43_RS04995 PF13144 Chaperone for flagella basal body P-ring formation WM43_RS05010 PF12850 Calcineurin-like phosphoesterase superfamily domain WM43_RS05015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WM43_RS05025 PF00849 RNA pseudouridylate synthase WM43_RS05025 PF01479 S4 domain WM43_RS05030 PF01966 HD domain WM43_RS05040 PF00923 Transaldolase/Fructose-6-phosphate aldolase WM43_RS05045 PF04055 Radical SAM superfamily WM43_RS05050 PF02901 Pyruvate formate lyase-like WM43_RS05050 PF01228 Glycine radical WM43_RS05055 PF00455 DeoR C terminal sensor domain WM43_RS05055 PF08220 DeoR-like helix-turn-helix domain WM43_RS05060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WM43_RS05085 PF00313 'Cold-shock' DNA-binding domain WM43_RS05090 PF00364 Biotin-requiring enzyme WM43_RS05090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WM43_RS05090 PF02817 e3 binding domain WM43_RS05095 PF02780 Transketolase, C-terminal domain WM43_RS05095 PF02779 Transketolase, pyrimidine binding domain WM43_RS05100 PF00676 Dehydrogenase E1 component WM43_RS05110 PF00501 AMP-binding enzyme WM43_RS05110 PF00668 Condensation domain WM43_RS05110 PF00550 Phosphopantetheine attachment site WM43_RS05110 PF00975 Thioesterase domain WM43_RS05120 PF00857 Isochorismatase family WM43_RS05120 PF00550 Phosphopantetheine attachment site WM43_RS05125 PF00501 AMP-binding enzyme WM43_RS05125 PF13193 AMP-binding enzyme C-terminal domain WM43_RS05130 PF00425 chorismate binding enzyme WM43_RS05135 PF07715 TonB-dependent Receptor Plug Domain WM43_RS05135 PF00593 TonB dependent receptor WM43_RS05140 PF00793 DAHP synthetase I family WM43_RS05145 PF00356 Bacterial regulatory proteins, lacI family WM43_RS05150 PF01464 Transglycosylase SLT domain WM43_RS05150 PF14718 Soluble lytic murein transglycosylase L domain WM43_RS05155 PF00563 EAL domain WM43_RS05155 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS05155 PF03707 Bacterial signalling protein N terminal repeat WM43_RS05160 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein WM43_RS05180 PF04357 TamB, inner membrane protein subunit of TAM complex WM43_RS05185 PF17243 POTRA domain TamA domain 1 WM43_RS05185 PF07244 Surface antigen variable number repeat WM43_RS05185 PF01103 Surface antigen WM43_RS05205 PF12323 Helix-turn-helix domain WM43_RS05205 PF01385 Probable transposase WM43_RS05205 PF07282 Putative transposase DNA-binding domain WM43_RS05210 PF13276 HTH-like domain WM43_RS05210 PF00665 Integrase core domain WM43_RS05215 PF01527 Transposase WM43_RS05220 PF07282 Putative transposase DNA-binding domain WM43_RS05220 PF12323 Helix-turn-helix domain WM43_RS05220 PF01385 Probable transposase WM43_RS05225 PF01797 Transposase IS200 like WM43_RS05230 PF02627 Carboxymuconolactone decarboxylase family WM43_RS05235 PF00403 Heavy-metal-associated domain WM43_RS05235 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM43_RS05235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WM43_RS05240 PF13416 Bacterial extracellular solute-binding protein WM43_RS05250 PF00005 ABC transporter WM43_RS05255 PF01066 CDP-alcohol phosphatidyltransferase WM43_RS05260 PF13406 Transglycosylase SLT domain WM43_RS05265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WM43_RS05265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WM43_RS05265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WM43_RS05265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WM43_RS05270 PF17206 SeqA protein N-terminal domain WM43_RS05270 PF03925 SeqA protein C-terminal domain WM43_RS05275 PF12697 Alpha/beta hydrolase family WM43_RS05285 PF01402 Ribbon-helix-helix protein, copG family WM43_RS05290 PF00258 Flavodoxin WM43_RS05300 PF01475 Ferric uptake regulator family WM43_RS05305 PF00749 tRNA synthetases class I (E and Q), catalytic domain WM43_RS05305 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain WM43_RS05310 PF03173 Putative carbohydrate binding domain WM43_RS05310 PF00728 Glycosyl hydrolase family 20, catalytic domain WM43_RS05310 PF02838 Glycosyl hydrolase family 20, domain 2 WM43_RS05310 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain WM43_RS05315 PF02378 Phosphotransferase system, EIIC WM43_RS05315 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 WM43_RS05315 PF00367 phosphotransferase system, EIIB WM43_RS05320 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase WM43_RS05325 PF01979 Amidohydrolase family WM43_RS05330 PF00480 ROK family WM43_RS05330 PF01047 MarR family WM43_RS05335 PF00884 Sulfatase WM43_RS05335 PF08019 Phosphoethanolamine transferase EptA/EptB WM43_RS05340 PF01966 HD domain WM43_RS05345 PF07694 5TMR of 5TMR-LYT WM43_RS05345 PF06580 Histidine kinase WM43_RS05350 PF04397 LytTr DNA-binding domain WM43_RS05350 PF00072 Response regulator receiver domain WM43_RS05355 PF02554 Carbon starvation protein CstA WM43_RS05360 PF11742 Protein of unknown function (DUF3302) WM43_RS05365 PF00529 HlyD membrane-fusion protein of T1SS WM43_RS05365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM43_RS05370 PF00271 Helicase conserved C-terminal domain WM43_RS05370 PF04851 Type III restriction enzyme, res subunit WM43_RS05375 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family WM43_RS05380 PF00462 Glutaredoxin WM43_RS05385 PF03372 Endonuclease/Exonuclease/phosphatase family WM43_RS05395 PF03061 Thioesterase superfamily WM43_RS05400 PF01370 NAD dependent epimerase/dehydratase family WM43_RS05410 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg WM43_RS05410 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II WM43_RS05410 PF10371 Domain of unknown function WM43_RS05410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WM43_RS05410 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase WM43_RS05415 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster WM43_RS05415 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WM43_RS05415 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM43_RS05425 PF03476 MOSC N-terminal beta barrel domain WM43_RS05425 PF03473 MOSC domain WM43_RS05425 PF00111 2Fe-2S iron-sulfur cluster binding domain WM43_RS05425 PF03476 MOSC N-terminal beta barrel domain WM43_RS05425 PF00111 2Fe-2S iron-sulfur cluster binding domain WM43_RS05425 PF03473 MOSC domain WM43_RS05430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS05430 PF08447 PAS fold WM43_RS05430 PF13426 PAS domain WM43_RS05435 PF01435 Peptidase family M48 WM43_RS05445 PF08241 Methyltransferase domain WM43_RS05445 PF12697 Alpha/beta hydrolase family WM43_RS05450 PF00155 Aminotransferase class I and II WM43_RS05455 PF06968 Biotin and Thiamin Synthesis associated domain WM43_RS05455 PF04055 Radical SAM superfamily WM43_RS05460 PF00202 Aminotransferase class-III WM43_RS05475 PF00152 tRNA synthetases class II (D, K and N) WM43_RS05475 PF01336 OB-fold nucleic acid binding domain WM43_RS05485 PF03605 Anaerobic c4-dicarboxylate membrane transporter WM43_RS05495 PF01546 Peptidase family M20/M25/M40 WM43_RS05495 PF07687 Peptidase dimerisation domain WM43_RS05500 PF03606 C4-dicarboxylate anaerobic carrier WM43_RS05510 PF03960 ArsC family WM43_RS05515 PF01546 Peptidase family M20/M25/M40 WM43_RS05515 PF07687 Peptidase dimerisation domain WM43_RS05520 PF02557 D-alanyl-D-alanine carboxypeptidase WM43_RS05525 PF03471 Transporter associated domain WM43_RS05525 PF02080 TrkA-C domain WM43_RS05525 PF00999 Sodium/hydrogen exchanger family WM43_RS05540 PF01810 LysE type translocator WM43_RS05545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS05545 PF00672 HAMP domain WM43_RS05545 PF12729 Four helix bundle sensory module for signal transduction WM43_RS05550 PF07509 Protein of unknown function (DUF1523) WM43_RS05565 PF01156 Inosine-uridine preferring nucleoside hydrolase WM43_RS05570 PF00849 RNA pseudouridylate synthase WM43_RS05575 PF01048 Phosphorylase superfamily WM43_RS05580 PF00465 Iron-containing alcohol dehydrogenase WM43_RS05615 PF00437 Type II/IV secretion system protein WM43_RS05620 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain WM43_RS05630 PF04972 BON domain WM43_RS05630 PF13629 Pilus formation protein N terminal region WM43_RS05630 PF00263 Bacterial type II and III secretion system protein WM43_RS05660 PF04355 SmpA / OmlA family WM43_RS05665 PF13460 NAD(P)H-binding WM43_RS05675 PF03099 Biotin/lipoate A/B protein ligase family WM43_RS05675 PF10437 Bacterial lipoate protein ligase C-terminus WM43_RS05685 PF12704 MacB-like periplasmic core domain WM43_RS05685 PF00005 ABC transporter WM43_RS05685 PF02687 FtsX-like permease family WM43_RS05690 PF12704 MacB-like periplasmic core domain WM43_RS05690 PF02687 FtsX-like permease family WM43_RS05690 PF00005 ABC transporter WM43_RS05695 PF02687 FtsX-like permease family WM43_RS05695 PF00005 ABC transporter WM43_RS05695 PF12704 MacB-like periplasmic core domain WM43_RS05700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM43_RS05700 PF00529 HlyD membrane-fusion protein of T1SS WM43_RS05705 PF00873 AcrB/AcrD/AcrF family WM43_RS05720 PF04143 Sulphur transport WM43_RS05735 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM43_RS05745 PF02308 MgtC family WM43_RS05750 PF00356 Bacterial regulatory proteins, lacI family WM43_RS05750 PF13407 Periplasmic binding protein domain WM43_RS05755 PF00251 Glycosyl hydrolases family 32 N-terminal domain WM43_RS05755 PF08244 Glycosyl hydrolases family 32 C terminal WM43_RS05760 PF02378 Phosphotransferase system, EIIC WM43_RS05760 PF00367 phosphotransferase system, EIIB WM43_RS05765 PF00294 pfkB family carbohydrate kinase WM43_RS05770 PF02264 LamB porin WM43_RS05770 PF11471 Maltoporin periplasmic N-terminal extension WM43_RS05775 PF00226 DnaJ domain WM43_RS05775 PF00684 DnaJ central domain WM43_RS05775 PF01556 DnaJ C terminal domain WM43_RS05780 PF00012 Hsp70 protein WM43_RS05785 PF01025 GrpE WM43_RS05790 PF01513 ATP-NAD kinase WM43_RS05795 PF02463 RecF/RecN/SMC N terminal domain WM43_RS05800 PF02833 DHHA2 domain WM43_RS05800 PF01368 DHH family WM43_RS05805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM43_RS05810 PF00005 ABC transporter WM43_RS05810 PF12704 MacB-like periplasmic core domain WM43_RS05810 PF02687 FtsX-like permease family WM43_RS05815 PF02321 Outer membrane efflux protein WM43_RS05820 PF00816 H-NS histone family WM43_RS05830 PF01527 Transposase WM43_RS05835 PF00665 Integrase core domain WM43_RS05835 PF13276 HTH-like domain WM43_RS05845 PF06082 Exopolysaccharide biosynthesis protein YbjH WM43_RS05875 PF02706 Chain length determinant protein WM43_RS05880 PF05598 Transposase domain (DUF772) WM43_RS05880 PF01609 Transposase DDE domain WM43_RS05890 PF00665 Integrase core domain WM43_RS05905 PF16363 GDP-mannose 4,6 dehydratase WM43_RS05910 PF02719 Polysaccharide biosynthesis protein WM43_RS05915 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family WM43_RS05925 PF02397 Bacterial sugar transferase WM43_RS05935 PF02350 UDP-N-acetylglucosamine 2-epimerase WM43_RS05940 PF01370 NAD dependent epimerase/dehydratase family WM43_RS05945 PF08485 Polysaccharide biosynthesis protein C-terminal WM43_RS05945 PF02719 Polysaccharide biosynthesis protein WM43_RS05950 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase WM43_RS05955 PF00483 Nucleotidyl transferase WM43_RS05960 PF04321 RmlD substrate binding domain WM43_RS05965 PF16363 GDP-mannose 4,6 dehydratase WM43_RS05970 PF00873 AcrB/AcrD/AcrF family WM43_RS05975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM43_RS05975 PF00529 HlyD membrane-fusion protein of T1SS WM43_RS05980 PF00440 Bacterial regulatory proteins, tetR family WM43_RS05980 PF08361 MAATS-type transcriptional repressor, C-terminal region WM43_RS05995 PF02001 Protein of unknown function DUF134 WM43_RS06015 PF18693 TRAM domain WM43_RS06015 PF04055 Radical SAM superfamily WM43_RS06015 PF00919 Uncharacterized protein family UPF0004 WM43_RS06020 PF05598 Transposase domain (DUF772) WM43_RS06020 PF01609 Transposase DDE domain WM43_RS06025 PF14821 Threonine synthase N terminus WM43_RS06025 PF00291 Pyridoxal-phosphate dependent enzyme WM43_RS06030 PF00288 GHMP kinases N terminal domain WM43_RS06030 PF08544 GHMP kinases C terminal WM43_RS06035 PF01842 ACT domain WM43_RS06035 PF00742 Homoserine dehydrogenase WM43_RS06035 PF13840 ACT domain WM43_RS06035 PF00696 Amino acid kinase family WM43_RS06035 PF03447 Homoserine dehydrogenase, NAD binding domain WM43_RS06040 PF00588 SpoU rRNA Methylase family WM43_RS06045 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) WM43_RS06055 PF00849 RNA pseudouridylate synthase WM43_RS06055 PF01479 S4 domain WM43_RS06060 PF04079 Segregation and condensation complex subunit ScpB WM43_RS06065 PF02616 Segregation and condensation protein ScpA WM43_RS06070 PF01300 Telomere recombination WM43_RS06075 PF02811 PHP domain WM43_RS06080 PF04715 Anthranilate synthase component I, N terminal region WM43_RS06080 PF00425 chorismate binding enzyme WM43_RS06085 PF00591 Glycosyl transferase family, a/b domain WM43_RS06085 PF02885 Glycosyl transferase family, helical bundle domain WM43_RS06085 PF00117 Glutamine amidotransferase class-I WM43_RS06090 PF02885 Glycosyl transferase family, helical bundle domain WM43_RS06090 PF00591 Glycosyl transferase family, a/b domain WM43_RS06095 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase WM43_RS06095 PF00218 Indole-3-glycerol phosphate synthase WM43_RS06100 PF00291 Pyridoxal-phosphate dependent enzyme WM43_RS06105 PF00290 Tryptophan synthase alpha chain WM43_RS06110 PF00665 Integrase core domain WM43_RS06110 PF13276 HTH-like domain WM43_RS06110 PF13333 Integrase core domain WM43_RS06120 PF04307 LexA-binding, inner membrane-associated putative hydrolase WM43_RS06140 PF07670 Nucleoside recognition WM43_RS06140 PF07662 Na+ dependent nucleoside transporter C-terminus WM43_RS06140 PF01773 Na+ dependent nucleoside transporter N-terminus WM43_RS06145 PF03960 ArsC family WM43_RS06150 PF01758 Sodium Bile acid symporter family WM43_RS06155 PF02374 Anion-transporting ATPase WM43_RS06160 PF06953 Arsenical resistance operon trans-acting repressor ArsD WM43_RS06180 PF03737 Aldolase/RraA WM43_RS06190 PF00486 Transcriptional regulatory protein, C terminal WM43_RS06190 PF00072 Response regulator receiver domain WM43_RS06205 PF00664 ABC transporter transmembrane region WM43_RS06205 PF00005 ABC transporter WM43_RS06210 PF00664 ABC transporter transmembrane region WM43_RS06210 PF00005 ABC transporter WM43_RS06230 PF18389 TrmO C-terminal domain WM43_RS06230 PF01980 tRNA-methyltransferase O WM43_RS06235 PF01292 Prokaryotic cytochrome b561 WM43_RS06245 PF00486 Transcriptional regulatory protein, C terminal WM43_RS06245 PF00072 Response regulator receiver domain WM43_RS06250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS06270 PF13808 DDE_Tnp_1-associated WM43_RS06270 PF01609 Transposase DDE domain WM43_RS06275 PF00004 ATPase family associated with various cellular activities (AAA) WM43_RS06275 PF17866 AAA lid domain WM43_RS06295 PF01266 FAD dependent oxidoreductase WM43_RS06300 PF07883 Cupin domain WM43_RS06300 PF01381 Helix-turn-helix WM43_RS06305 PF00171 Aldehyde dehydrogenase family WM43_RS06310 PF00202 Aminotransferase class-III WM43_RS06315 PF00324 Amino acid permease WM43_RS06325 PF00324 Amino acid permease WM43_RS06335 PF02690 Na+/Pi-cotransporter WM43_RS06340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WM43_RS06340 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase WM43_RS06350 PF04381 Putative exonuclease, RdgC WM43_RS06360 PF12320 Type 5 capsule protein repressor C-terminal domain WM43_RS06360 PF00149 Calcineurin-like phosphoesterase WM43_RS06365 PF13476 AAA domain WM43_RS06370 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase WM43_RS06380 PF00224 Pyruvate kinase, barrel domain WM43_RS06380 PF02887 Pyruvate kinase, alpha/beta domain WM43_RS06385 PF12794 Mechanosensitive ion channel inner membrane domain 1 WM43_RS06385 PF12795 Mechanosensitive ion channel porin domain WM43_RS06385 PF00924 Mechanosensitive ion channel WM43_RS06395 PF01431 Peptidase family M13 WM43_RS06395 PF05649 Peptidase family M13 WM43_RS06400 PF08448 PAS fold WM43_RS06400 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS06405 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 WM43_RS06410 PF05524 PEP-utilising enzyme, N-terminal WM43_RS06410 PF00391 PEP-utilising enzyme, mobile domain WM43_RS06410 PF02896 PEP-utilising enzyme, TIM barrel domain WM43_RS06415 PF00381 PTS HPr component phosphorylation site WM43_RS06420 PF00291 Pyridoxal-phosphate dependent enzyme WM43_RS06425 PF00004 ATPase family associated with various cellular activities (AAA) WM43_RS06425 PF01434 Peptidase family M41 WM43_RS06425 PF17862 AAA+ lid domain WM43_RS06435 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WM43_RS06435 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WM43_RS06440 PF00672 HAMP domain WM43_RS06440 PF01966 HD domain WM43_RS06445 PF13401 AAA domain WM43_RS06445 PF01471 Putative peptidoglycan binding domain WM43_RS06450 PF16537 Type II secretion system protein B WM43_RS06455 PF11356 Type II secretion system protein C WM43_RS06460 PF03958 Bacterial type II/III secretion system short domain WM43_RS06460 PF00263 Bacterial type II and III secretion system protein WM43_RS06465 PF00437 Type II/IV secretion system protein WM43_RS06470 PF00482 Type II secretion system (T2SS), protein F WM43_RS06475 PF07963 Prokaryotic N-terminal methylation motif WM43_RS06475 PF08334 Type II secretion system (T2SS), protein G WM43_RS06480 PF07963 Prokaryotic N-terminal methylation motif WM43_RS06480 PF12019 Type II transport protein GspH WM43_RS06485 PF07963 Prokaryotic N-terminal methylation motif WM43_RS06485 PF02501 Type II secretion system (T2SS), protein I WM43_RS06490 PF07963 Prokaryotic N-terminal methylation motif WM43_RS06490 PF11612 Type II secretion system (T2SS), protein J WM43_RS06495 PF03934 Type II secretion system (T2SS), protein K WM43_RS06500 PF05134 Type II secretion system (T2SS), protein L WM43_RS06500 PF12693 GspL periplasmic domain WM43_RS06505 PF04612 Type II secretion system (T2SS), protein M WM43_RS06510 PF01203 Type II secretion system (T2SS), protein N WM43_RS06515 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family WM43_RS06520 PF00596 Class II Aldolase and Adducin N-terminal domain WM43_RS06525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 WM43_RS06530 PF03611 PTS system sugar-specific permease component WM43_RS06545 PF01261 Xylose isomerase-like TIM barrel WM43_RS06550 PF00455 DeoR C terminal sensor domain WM43_RS06550 PF08220 DeoR-like helix-turn-helix domain WM43_RS06560 PF01027 Inhibitor of apoptosis-promoting Bax1 WM43_RS06565 PF12805 FUSC-like inner membrane protein yccS WM43_RS06570 PF04358 DsrC like protein WM43_RS06575 PF01408 Oxidoreductase family, NAD-binding Rossmann fold WM43_RS06600 PF04055 Radical SAM superfamily WM43_RS06600 PF08497 Radical SAM N-terminal WM43_RS06600 PF11842 Domain of unknown function (DUF3362) WM43_RS06605 PF00873 AcrB/AcrD/AcrF family WM43_RS06610 PF00529 HlyD membrane-fusion protein of T1SS WM43_RS06610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM43_RS06615 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS06615 PF17158 Membrane-associated sensor, integral membrane domain WM43_RS06620 PF01734 Patatin-like phospholipase WM43_RS06625 PF13520 Amino acid permease WM43_RS06640 PF01389 OmpA-like transmembrane domain WM43_RS06640 PF00691 OmpA family WM43_RS06650 PF00691 OmpA family WM43_RS06650 PF01389 OmpA-like transmembrane domain WM43_RS06655 PF00691 OmpA family WM43_RS06655 PF01389 OmpA-like transmembrane domain WM43_RS06660 PF00390 Malic enzyme, N-terminal domain WM43_RS06660 PF03949 Malic enzyme, NAD binding domain WM43_RS06665 PF12833 Helix-turn-helix domain WM43_RS06670 PF01554 MatE WM43_RS06675 PF10692 Protein of unknown function (DUF2498) WM43_RS06680 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS06685 PF00860 Permease family WM43_RS06695 PF01235 Sodium:alanine symporter family WM43_RS06700 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain WM43_RS06700 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain WM43_RS06705 PF01699 Sodium/calcium exchanger protein WM43_RS06710 PF08534 Redoxin WM43_RS06720 PF00293 NUDIX domain WM43_RS06735 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase WM43_RS06735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WM43_RS06740 PF03932 CutC family WM43_RS06745 PF00480 ROK family WM43_RS06755 PF01435 Peptidase family M48 WM43_RS06760 PF12849 PBP superfamily domain WM43_RS06765 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS06765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS06765 PF00989 PAS fold WM43_RS06765 PF11808 Phosphate regulon sensor protein PhoR WM43_RS06770 PF00486 Transcriptional regulatory protein, C terminal WM43_RS06770 PF00072 Response regulator receiver domain WM43_RS06775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WM43_RS06780 PF01590 GAF domain WM43_RS06780 PF02954 Bacterial regulatory protein, Fis family WM43_RS06780 PF00158 Sigma-54 interaction domain WM43_RS06785 PF00171 Aldehyde dehydrogenase family WM43_RS06795 PF00892 EamA-like transporter family WM43_RS06800 PF00072 Response regulator receiver domain WM43_RS06800 PF12431 Transcriptional regulator WM43_RS06805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS06805 PF00989 PAS fold WM43_RS06805 PF17203 Single cache domain 3 WM43_RS06805 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain WM43_RS06810 PF00390 Malic enzyme, N-terminal domain WM43_RS06810 PF03949 Malic enzyme, NAD binding domain WM43_RS06815 PF03390 2-hydroxycarboxylate transporter family WM43_RS06820 PF01047 MarR family WM43_RS06825 PF00529 HlyD membrane-fusion protein of T1SS WM43_RS06825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM43_RS06855 PF13597 Anaerobic ribonucleoside-triphosphate reductase WM43_RS06855 PF03477 ATP cone domain WM43_RS06865 PF12826 Helix-hairpin-helix motif WM43_RS06865 PF00533 BRCA1 C Terminus (BRCT) domain WM43_RS06865 PF01653 NAD-dependent DNA ligase adenylation domain WM43_RS06865 PF03120 NAD-dependent DNA ligase OB-fold domain WM43_RS06865 PF03119 NAD-dependent DNA ligase C4 zinc finger domain WM43_RS06870 PF04354 ZipA, C-terminal FtsZ-binding domain WM43_RS06875 PF02463 RecF/RecN/SMC N terminal domain WM43_RS06875 PF06470 SMC proteins Flexible Hinge Domain WM43_RS06885 PF03458 UPF0126 domain WM43_RS06895 PF05951 Bacterial protein of unknown function (DUF882) WM43_RS06900 PF03734 L,D-transpeptidase catalytic domain WM43_RS06900 PF01471 Putative peptidoglycan binding domain WM43_RS06915 PF00535 Glycosyl transferase family 2 WM43_RS06930 PF00128 Alpha amylase, catalytic domain WM43_RS06940 PF00196 Bacterial regulatory proteins, luxR family WM43_RS06940 PF00072 Response regulator receiver domain WM43_RS06960 PF02254 TrkA-N domain WM43_RS06960 PF02080 TrkA-C domain WM43_RS06960 PF00999 Sodium/hydrogen exchanger family WM43_RS06965 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS06970 PF01171 PP-loop family WM43_RS06970 PF09179 TilS substrate binding domain WM43_RS06970 PF11734 TilS substrate C-terminal domain WM43_RS06975 PF05649 Peptidase family M13 WM43_RS06975 PF01431 Peptidase family M13 WM43_RS06990 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain WM43_RS06990 PF01276 Orn/Lys/Arg decarboxylase, major domain WM43_RS06990 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain WM43_RS06995 PF13520 Amino acid permease WM43_RS07000 PF00486 Transcriptional regulatory protein, C terminal WM43_RS07000 PF18500 CadC C-terminal domain 1 WM43_RS07005 PF13520 Amino acid permease WM43_RS07015 PF01609 Transposase DDE domain WM43_RS07015 PF13808 DDE_Tnp_1-associated WM43_RS07020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS07020 PF03466 LysR substrate binding domain WM43_RS07025 PF12706 Beta-lactamase superfamily domain WM43_RS07040 PF03466 LysR substrate binding domain WM43_RS07040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS07050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WM43_RS07050 PF00205 Thiamine pyrophosphate enzyme, central domain WM43_RS07050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WM43_RS07055 PF03306 Alpha-acetolactate decarboxylase WM43_RS07060 PF03466 LysR substrate binding domain WM43_RS07060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS07065 PF00579 tRNA synthetases class I (W and Y) WM43_RS07070 PF01551 Peptidase family M23 WM43_RS07070 PF08525 Opacity-associated protein A N-terminal motif WM43_RS07070 PF01476 LysM domain WM43_RS07075 PF03702 Anhydro-N-acetylmuramic acid kinase WM43_RS07100 PF01042 Endoribonuclease L-PSP WM43_RS07110 PF01965 DJ-1/PfpI family WM43_RS07115 PF03466 LysR substrate binding domain WM43_RS07115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS07120 PF00107 Zinc-binding dehydrogenase WM43_RS07120 PF08240 Alcohol dehydrogenase GroES-like domain WM43_RS07130 PF02801 Beta-ketoacyl synthase, C-terminal domain WM43_RS07130 PF08659 KR domain WM43_RS07130 PF00550 Phosphopantetheine attachment site WM43_RS07130 PF14765 Polyketide synthase dehydratase WM43_RS07130 PF00109 Beta-ketoacyl synthase, N-terminal domain WM43_RS07130 PF16197 Ketoacyl-synthetase C-terminal extension WM43_RS07130 PF08240 Alcohol dehydrogenase GroES-like domain WM43_RS07130 PF00698 Acyl transferase domain WM43_RS07135 PF00456 Transketolase, thiamine diphosphate binding domain WM43_RS07135 PF02780 Transketolase, C-terminal domain WM43_RS07135 PF02779 Transketolase, pyrimidine binding domain WM43_RS07140 PF02772 S-adenosylmethionine synthetase, central domain WM43_RS07140 PF00438 S-adenosylmethionine synthetase, N-terminal domain WM43_RS07140 PF02773 S-adenosylmethionine synthetase, C-terminal domain WM43_RS07145 PF17283 SprT-like zinc ribbon domain WM43_RS07145 PF10263 SprT-like family WM43_RS07150 PF04231 Endonuclease I WM43_RS07155 PF04452 RNA methyltransferase WM43_RS07160 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain WM43_RS07160 PF02951 Prokaryotic glutathione synthetase, N-terminal domain WM43_RS07165 PF02622 Uncharacterized ACR, COG1678 WM43_RS07170 PF03652 Holliday junction resolvase WM43_RS07175 PF00854 POT family WM43_RS07180 PF03466 LysR substrate binding domain WM43_RS07180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS07185 PF07690 Major Facilitator Superfamily WM43_RS07190 PF07726 ATPase family associated with various cellular activities (AAA) WM43_RS07190 PF17863 AAA lid domain WM43_RS07200 PF11992 Domain of unknown function (DUF3488) WM43_RS07200 PF01841 Transglutaminase-like superfamily WM43_RS07200 PF13559 Domain of unknown function (DUF4129) WM43_RS07205 PF01235 Sodium:alanine symporter family WM43_RS07210 PF00923 Transaldolase/Fructose-6-phosphate aldolase WM43_RS07220 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit WM43_RS07225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain WM43_RS07225 PF14579 Helix-hairpin-helix motif WM43_RS07225 PF02811 PHP domain WM43_RS07225 PF01336 OB-fold nucleic acid binding domain WM43_RS07225 PF07733 Bacterial DNA polymerase III alpha NTPase domain WM43_RS07230 PF01351 Ribonuclease HII WM43_RS07235 PF02684 Lipid-A-disaccharide synthetase WM43_RS07240 PF00132 Bacterial transferase hexapeptide (six repeats) WM43_RS07240 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 WM43_RS07245 PF07977 FabA-like domain WM43_RS07250 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD WM43_RS07250 PF00132 Bacterial transferase hexapeptide (six repeats) WM43_RS07255 PF03938 Outer membrane protein (OmpH-like) WM43_RS07260 PF01103 Surface antigen WM43_RS07260 PF07244 Surface antigen variable number repeat WM43_RS07265 PF17820 PDZ domain WM43_RS07265 PF02163 Peptidase family M50 WM43_RS07270 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase WM43_RS07270 PF13288 DXP reductoisomerase C-terminal domain WM43_RS07270 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain WM43_RS07280 PF01255 Putative undecaprenyl diphosphate synthase WM43_RS07285 PF01765 Ribosome recycling factor WM43_RS07290 PF00696 Amino acid kinase family WM43_RS07295 PF00889 Elongation factor TS WM43_RS07300 PF00318 Ribosomal protein S2 WM43_RS07305 PF00557 Metallopeptidase family M24 WM43_RS07310 PF01909 Nucleotidyltransferase domain WM43_RS07310 PF01966 HD domain WM43_RS07310 PF08335 GlnD PII-uridylyltransferase WM43_RS07310 PF01842 ACT domain WM43_RS07315 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal WM43_RS07315 PF00132 Bacterial transferase hexapeptide (six repeats) WM43_RS07315 PF14602 Hexapeptide repeat of succinyl-transferase WM43_RS07320 PF11944 Protein of unknown function (DUF3461) WM43_RS07325 PF00367 phosphotransferase system, EIIB WM43_RS07325 PF02378 Phosphotransferase system, EIIC WM43_RS07330 PF07148 Maltose operon periplasmic protein precursor (MalM) WM43_RS07340 PF00258 Flavodoxin WM43_RS07345 PF00849 RNA pseudouridylate synthase WM43_RS07350 PF04287 tRNA pseudouridine synthase C WM43_RS07375 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) WM43_RS07395 PF00872 Transposase, Mutator family WM43_RS07405 PF02796 Helix-turn-helix domain of resolvase WM43_RS07405 PF00239 Resolvase, N terminal domain WM43_RS07415 PF01527 Transposase WM43_RS07420 PF13276 HTH-like domain WM43_RS07420 PF00665 Integrase core domain WM43_RS07465 PF00075 RNase H WM43_RS07485 PF07348 Syd protein (SUKH-2) WM43_RS07490 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term WM43_RS07490 PF14489 QueF-like protein WM43_RS07500 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS07505 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases WM43_RS07505 PF11892 Domain of unknown function (DUF3412) WM43_RS07505 PF03641 Possible lysine decarboxylase WM43_RS07510 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain WM43_RS07510 PF01367 5'-3' exonuclease, C-terminal SAM fold WM43_RS07515 PF00180 Isocitrate/isopropylmalate dehydrogenase WM43_RS07515 PF18324 Hypothetical protein TT1725 WM43_RS07525 PF18125 RlmM ferredoxin-like domain WM43_RS07525 PF01728 FtsJ-like methyltransferase WM43_RS07530 PF04241 Protein of unknown function (DUF423) WM43_RS07540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS07540 PF03466 LysR substrate binding domain WM43_RS07545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS07545 PF00672 HAMP domain WM43_RS07550 PF11798 IMS family HHH motif WM43_RS07550 PF00817 impB/mucB/samB family WM43_RS07550 PF11799 impB/mucB/samB family C-terminal domain WM43_RS07560 PF01965 DJ-1/PfpI family WM43_RS07565 PF02558 Ketopantoate reductase PanE/ApbA WM43_RS07565 PF08546 Ketopantoate reductase PanE/ApbA C terminal WM43_RS07570 PF04461 Protein of unknown function (DUF520) WM43_RS07575 PF03502 Nucleoside-specific channel-forming protein, Tsx WM43_RS07580 PF07690 Major Facilitator Superfamily WM43_RS07585 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WM43_RS07595 PF05175 Methyltransferase small domain WM43_RS07600 PF01722 BolA-like protein WM43_RS07605 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) WM43_RS07605 PF11973 NQRA C-terminal domain WM43_RS07610 PF03116 NQR2, RnfD, RnfE family WM43_RS07615 PF04205 FMN-binding domain WM43_RS07620 PF02508 Rnf-Nqr subunit, membrane protein WM43_RS07625 PF02508 Rnf-Nqr subunit, membrane protein WM43_RS07630 PF00175 Oxidoreductase NAD-binding domain WM43_RS07630 PF00970 Oxidoreductase FAD-binding domain WM43_RS07630 PF00111 2Fe-2S iron-sulfur cluster binding domain WM43_RS07635 PF02424 ApbE family WM43_RS07680 PF00106 short chain dehydrogenase WM43_RS07690 PF00875 DNA photolyase WM43_RS07690 PF03441 FAD binding domain of DNA photolyase WM43_RS07695 PF13411 MerR HTH family regulatory protein WM43_RS07700 PF08349 Protein of unknown function (DUF1722) WM43_RS07715 PF06508 Queuosine biosynthesis protein QueC WM43_RS07730 PF01817 Chorismate mutase type II WM43_RS07730 PF00800 Prephenate dehydratase WM43_RS07760 PF09588 YqaJ-like viral recombinase domain WM43_RS07805 PF04002 RadC-like JAB domain WM43_RS07820 PF13099 Domain of unknown function (DUF3944) WM43_RS07820 PF03981 Ubiquinol-cytochrome C chaperone WM43_RS07840 PF01609 Transposase DDE domain WM43_RS07840 PF13808 DDE_Tnp_1-associated WM43_RS07860 PF02463 RecF/RecN/SMC N terminal domain WM43_RS07865 PF00271 Helicase conserved C-terminal domain WM43_RS07865 PF00176 SNF2 family N-terminal domain WM43_RS07880 PF13808 DDE_Tnp_1-associated WM43_RS07880 PF01609 Transposase DDE domain WM43_RS07895 PF00717 Peptidase S24-like WM43_RS07900 PF00817 impB/mucB/samB family WM43_RS07900 PF11799 impB/mucB/samB family C-terminal domain WM43_RS07900 PF11798 IMS family HHH motif WM43_RS07900 PF13438 Domain of unknown function (DUF4113) WM43_RS07905 PF13784 Fic/DOC family N-terminal WM43_RS07905 PF02661 Fic/DOC family WM43_RS07935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS07940 PF03573 outer membrane porin, OprD family WM43_RS07945 PF00106 short chain dehydrogenase WM43_RS07970 PF02074 Carboxypeptidase Taq (M32) metallopeptidase WM43_RS08000 PF00114 Pilin (bacterial filament) WM43_RS08000 PF07963 Prokaryotic N-terminal methylation motif WM43_RS08005 PF02805 Metal binding domain of Ada WM43_RS08005 PF06029 AlkA N-terminal domain WM43_RS08005 PF00730 HhH-GPD superfamily base excision DNA repair protein WM43_RS08005 PF12833 Helix-turn-helix domain WM43_RS08010 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain WM43_RS08010 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain WM43_RS08015 PF01136 Peptidase family U32 WM43_RS08015 PF12392 Collagenase WM43_RS08020 PF01810 LysE type translocator WM43_RS08025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS08025 PF03466 LysR substrate binding domain WM43_RS08030 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WM43_RS08030 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WM43_RS08035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS08035 PF00672 HAMP domain WM43_RS08035 PF02743 Cache domain WM43_RS08040 PF00072 Response regulator receiver domain WM43_RS08050 PF01584 CheW-like domain WM43_RS08050 PF07194 P2 response regulator binding domain WM43_RS08050 PF02895 Signal transducing histidine kinase, homodimeric domain WM43_RS08050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS08050 PF01627 Hpt domain WM43_RS08055 PF00672 HAMP domain WM43_RS08055 PF12729 Four helix bundle sensory module for signal transduction WM43_RS08055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS08060 PF01584 CheW-like domain WM43_RS08065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS08065 PF00672 HAMP domain WM43_RS08070 PF03705 CheR methyltransferase, all-alpha domain WM43_RS08070 PF01739 CheR methyltransferase, SAM binding domain WM43_RS08075 PF03975 CheD chemotactic sensory transduction WM43_RS08080 PF00072 Response regulator receiver domain WM43_RS08080 PF01339 CheB methylesterase WM43_RS08085 PF01138 3' exoribonuclease family, domain 1 WM43_RS08085 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain WM43_RS08085 PF03725 3' exoribonuclease family, domain 2 WM43_RS08085 PF00013 KH domain WM43_RS08085 PF00575 S1 RNA binding domain WM43_RS08090 PF00312 Ribosomal protein S15 WM43_RS08095 PF09157 Pseudouridine synthase II TruB, C-terminal WM43_RS08095 PF01509 TruB family pseudouridylate synthase (N terminal domain) WM43_RS08095 PF16198 tRNA pseudouridylate synthase B C-terminal domain WM43_RS08100 PF02033 Ribosome-binding factor A WM43_RS08105 PF11987 Translation-initiation factor 2 WM43_RS08105 PF04760 Translation initiation factor IF-2, N-terminal region WM43_RS08105 PF08364 Bacterial translation initiation factor IF-2 associated region WM43_RS08105 PF00009 Elongation factor Tu GTP binding domain WM43_RS08110 PF08529 NusA N-terminal domain WM43_RS08110 PF00575 S1 RNA binding domain WM43_RS08110 PF13184 NusA-like KH domain WM43_RS08115 PF17384 RimP C-terminal SH3 domain WM43_RS08115 PF02576 RimP N-terminal domain WM43_RS08130 PF03840 Preprotein translocase SecG subunit WM43_RS08135 PF00121 Triosephosphate isomerase WM43_RS08140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WM43_RS08140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WM43_RS08140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WM43_RS08140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WM43_RS08145 PF00809 Pterin binding enzyme WM43_RS08150 PF00004 ATPase family associated with various cellular activities (AAA) WM43_RS08150 PF06480 FtsH Extracellular WM43_RS08150 PF17862 AAA+ lid domain WM43_RS08150 PF01434 Peptidase family M41 WM43_RS08155 PF01728 FtsJ-like methyltransferase WM43_RS08160 PF01985 CRS1 / YhbY (CRM) domain WM43_RS08170 PF01272 Transcription elongation factor, GreA/GreB, C-term WM43_RS08170 PF03449 Transcription elongation factor, N-terminal WM43_RS08175 PF13677 Membrane MotB of proton-channel complex MotA/MotB WM43_RS08175 PF00691 OmpA family WM43_RS08180 PF01618 MotA/TolQ/ExbB proton channel family WM43_RS08185 PF02609 Exonuclease VII small subunit WM43_RS08190 PF00348 Polyprenyl synthetase WM43_RS08195 PF13292 1-deoxy-D-xylulose-5-phosphate synthase WM43_RS08195 PF02779 Transketolase, pyrimidine binding domain WM43_RS08195 PF02780 Transketolase, C-terminal domain WM43_RS08200 PF02872 5'-nucleotidase, C-terminal domain WM43_RS08200 PF00149 Calcineurin-like phosphoesterase WM43_RS08220 PF00072 Response regulator receiver domain WM43_RS08220 PF02954 Bacterial regulatory protein, Fis family WM43_RS08220 PF00158 Sigma-54 interaction domain WM43_RS08225 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase WM43_RS08225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WM43_RS08235 PF04102 SlyX WM43_RS08240 PF12911 N-terminal TM domain of oligopeptide transport permease C WM43_RS08240 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS08245 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS08250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WM43_RS08255 PF00005 ABC transporter WM43_RS08255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WM43_RS08260 PF04608 Phosphatidylglycerophosphatase A WM43_RS08265 PF00586 AIR synthase related protein, N-terminal domain WM43_RS08265 PF02769 AIR synthase related protein, C-terminal domain WM43_RS08270 PF01029 NusB family WM43_RS08275 PF00885 6,7-dimethyl-8-ribityllumazine synthase WM43_RS08280 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WM43_RS08280 PF00925 GTP cyclohydrolase II WM43_RS08285 PF00677 Lumazine binding domain WM43_RS08290 PF01872 RibD C-terminal domain WM43_RS08290 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WM43_RS08295 PF03477 ATP cone domain WM43_RS08305 PF00464 Serine hydroxymethyltransferase WM43_RS08315 PF00072 Response regulator receiver domain WM43_RS08315 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS08315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS08315 PF01627 Hpt domain WM43_RS08315 PF00672 HAMP domain WM43_RS08320 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family WM43_RS08330 PF00486 Transcriptional regulatory protein, C terminal WM43_RS08330 PF00072 Response regulator receiver domain WM43_RS08335 PF03264 NapC/NirT cytochrome c family, N-terminal region WM43_RS08340 PF00384 Molybdopterin oxidoreductase WM43_RS08340 PF18364 Molybdopterin oxidoreductase N-terminal domain WM43_RS08340 PF01568 Molydopterin dinucleotide binding domain WM43_RS08345 PF02613 Nitrate reductase delta subunit WM43_RS08355 PF00563 EAL domain WM43_RS08355 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS08355 PF03707 Bacterial signalling protein N terminal repeat WM43_RS08365 PF00501 AMP-binding enzyme WM43_RS08365 PF16177 Acetyl-coenzyme A synthetase N-terminus WM43_RS08365 PF13193 AMP-binding enzyme C-terminal domain WM43_RS08370 PF01220 Dehydroquinase class II WM43_RS08375 PF00364 Biotin-requiring enzyme WM43_RS08380 PF00289 Biotin carboxylase, N-terminal domain WM43_RS08380 PF02785 Biotin carboxylase C-terminal domain WM43_RS08380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WM43_RS08385 PF06196 Protein of unknown function (DUF997) WM43_RS08390 PF00474 Sodium:solute symporter family WM43_RS08395 PF02378 Phosphotransferase system, EIIC WM43_RS08395 PF00367 phosphotransferase system, EIIB WM43_RS08395 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 WM43_RS08400 PF03466 LysR substrate binding domain WM43_RS08400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS08405 PF00107 Zinc-binding dehydrogenase WM43_RS08405 PF08240 Alcohol dehydrogenase GroES-like domain WM43_RS08415 PF14602 Hexapeptide repeat of succinyl-transferase WM43_RS08415 PF12464 Maltose acetyltransferase WM43_RS08420 PF00881 Nitroreductase family WM43_RS08425 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WM43_RS08425 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM43_RS08430 PF01343 Peptidase family S49 WM43_RS08435 PF03734 L,D-transpeptidase catalytic domain WM43_RS08435 PF17969 L,D-transpeptidase C-terminal domain WM43_RS08440 PF01527 Transposase WM43_RS08445 PF13276 HTH-like domain WM43_RS08445 PF13683 Integrase core domain WM43_RS08460 PF02472 Biopolymer transport protein ExbD/TolR WM43_RS08465 PF01618 MotA/TolQ/ExbB proton channel family WM43_RS08470 PF01618 MotA/TolQ/ExbB proton channel family WM43_RS08480 PF07715 TonB-dependent Receptor Plug Domain WM43_RS08480 PF00593 TonB dependent receptor WM43_RS08485 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS08490 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS08490 PF12911 N-terminal TM domain of oligopeptide transport permease C WM43_RS08500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WM43_RS08500 PF00005 ABC transporter WM43_RS08505 PF00005 ABC transporter WM43_RS08505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WM43_RS08515 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WM43_RS08515 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WM43_RS08515 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WM43_RS08520 PF01370 NAD dependent epimerase/dehydratase family WM43_RS08525 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) WM43_RS08535 PF01464 Transglycosylase SLT domain WM43_RS08550 PF12848 ABC transporter WM43_RS08550 PF00005 ABC transporter WM43_RS08560 PF00860 Permease family WM43_RS08565 PF00749 tRNA synthetases class I (E and Q), catalytic domain WM43_RS08570 PF00672 HAMP domain WM43_RS08570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS08580 PF00313 'Cold-shock' DNA-binding domain WM43_RS08620 PF00929 Exonuclease WM43_RS08625 PF03193 RsgA GTPase WM43_RS08630 PF02666 Phosphatidylserine decarboxylase WM43_RS08635 PF09905 DNA-binding protein VF530 WM43_RS08650 PF00171 Aldehyde dehydrogenase family WM43_RS08655 PF01472 PUA domain WM43_RS08655 PF00696 Amino acid kinase family WM43_RS08660 PF07417 Sigma factor-binding transcriptional regulator Crl WM43_RS08665 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) WM43_RS08670 PF00156 Phosphoribosyl transferase domain WM43_RS08675 PF01546 Peptidase family M20/M25/M40 WM43_RS08675 PF07687 Peptidase dimerisation domain WM43_RS08680 PF05099 Tellurite resistance protein TerB WM43_RS08680 PF00226 DnaJ domain WM43_RS08685 PF00483 Nucleotidyl transferase WM43_RS08690 PF01636 Phosphotransferase enzyme family WM43_RS08695 PF04453 LPS transport system D WM43_RS08695 PF03968 OstA-like protein WM43_RS08700 PF09312 SurA N-terminal domain WM43_RS08700 PF00639 PPIC-type PPIASE domain WM43_RS08705 PF04166 Pyridoxal phosphate biosynthetic protein PdxA WM43_RS08710 PF00398 Ribosomal RNA adenine dimethylase WM43_RS08715 PF04379 ApaG domain WM43_RS08720 PF00149 Calcineurin-like phosphoesterase WM43_RS08735 PF00296 Luciferase-like monooxygenase WM43_RS08745 PF07670 Nucleoside recognition WM43_RS08750 PF01018 GTP1/OBG WM43_RS08750 PF01926 50S ribosome-binding GTPase WM43_RS08755 PF01016 Ribosomal L27 protein WM43_RS08760 PF00829 Ribosomal prokaryotic L21 protein WM43_RS08765 PF00348 Polyprenyl synthetase WM43_RS08770 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) WM43_RS08775 PF01145 SPFH domain / Band 7 family WM43_RS08780 PF01145 SPFH domain / Band 7 family WM43_RS08780 PF12221 Bacterial membrane protein N terminal WM43_RS08785 PF01926 50S ribosome-binding GTPase WM43_RS08785 PF16360 GTP-binding GTPase Middle Region WM43_RS08785 PF13167 GTP-binding GTPase N-terminal WM43_RS08790 PF17209 Hfq protein WM43_RS08800 PF01119 DNA mismatch repair protein, C-terminal domain WM43_RS08800 PF08676 MutL C terminal dimerisation domain WM43_RS08805 PF01119 DNA mismatch repair protein, C-terminal domain WM43_RS08805 PF08676 MutL C terminal dimerisation domain WM43_RS08810 PF01520 N-acetylmuramoyl-L-alanine amidase WM43_RS08815 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE WM43_RS08820 PF03853 YjeF-related protein N-terminus WM43_RS08820 PF01256 Carbohydrate kinase WM43_RS08825 PF08331 Domain of unknown function (DUF1730) WM43_RS08830 PF00480 ROK family WM43_RS08840 PF09383 NIL domain WM43_RS08840 PF00005 ABC transporter WM43_RS08845 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS08850 PF03180 NLPA lipoprotein WM43_RS08855 PF02357 Transcription termination factor nusG WM43_RS08860 PF00672 HAMP domain WM43_RS08860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS08865 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS08865 PF03707 Bacterial signalling protein N terminal repeat WM43_RS08865 PF00563 EAL domain WM43_RS08870 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS08870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS08870 PF09456 RcsC Alpha-Beta-Loop (ABL) WM43_RS08870 PF00072 Response regulator receiver domain WM43_RS08880 PF01966 HD domain WM43_RS08880 PF13286 Phosphohydrolase-associated domain WM43_RS08885 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS08885 PF18415 Histidine kinase receptor ArcB trans-membrane domain WM43_RS08885 PF01627 Hpt domain WM43_RS08885 PF00989 PAS fold WM43_RS08885 PF00072 Response regulator receiver domain WM43_RS08885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS08905 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) WM43_RS08910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS08910 PF03466 LysR substrate binding domain WM43_RS08920 PF01259 SAICAR synthetase WM43_RS08925 PF06804 NlpB/DapX lipoprotein WM43_RS08930 PF00701 Dihydrodipicolinate synthetase family WM43_RS08935 PF01842 ACT domain WM43_RS08940 PF00578 AhpC/TSA family WM43_RS08945 PF03887 YfbU domain WM43_RS08950 PF04217 Protein of unknown function, DUF412 WM43_RS08955 PF00871 Acetokinase family WM43_RS08960 PF07085 DRTGG domain WM43_RS08960 PF01515 Phosphate acetyl/butaryl transferase WM43_RS08970 PF00483 Nucleotidyl transferase WM43_RS08975 PF00854 POT family WM43_RS08980 PF00072 Response regulator receiver domain WM43_RS09010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM43_RS09015 PF02321 Outer membrane efflux protein WM43_RS09020 PF01207 Dihydrouridine synthase (Dus) WM43_RS09025 PF02954 Bacterial regulatory protein, Fis family WM43_RS09045 PF01546 Peptidase family M20/M25/M40 WM43_RS09050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS09050 PF03466 LysR substrate binding domain WM43_RS09055 PF01810 LysE type translocator WM43_RS09060 PF10369 Small subunit of acetolactate synthase WM43_RS09065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WM43_RS09065 PF00205 Thiamine pyrophosphate enzyme, central domain WM43_RS09065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WM43_RS09075 PF01569 PAP2 superfamily WM43_RS09085 PF08502 LeuA allosteric (dimerisation) domain WM43_RS09085 PF00682 HMGL-like WM43_RS09090 PF00180 Isocitrate/isopropylmalate dehydrogenase WM43_RS09095 PF00330 Aconitase family (aconitate hydratase) WM43_RS09100 PF00694 Aconitase C-terminal domain WM43_RS09120 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS09125 PF00005 ABC transporter WM43_RS09130 PF02562 PhoH-like protein WM43_RS09130 PF13638 PIN domain WM43_RS09140 PF02867 Ribonucleotide reductase, barrel domain WM43_RS09140 PF08343 Ribonucleotide reductase N-terminal WM43_RS09140 PF00317 Ribonucleotide reductase, all-alpha domain WM43_RS09170 PF03707 Bacterial signalling protein N terminal repeat WM43_RS09170 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS09170 PF00563 EAL domain WM43_RS09180 PF00118 TCP-1/cpn60 chaperonin family WM43_RS09185 PF00166 Chaperonin 10 Kd subunit WM43_RS09195 PF01554 MatE WM43_RS09200 PF04186 FxsA cytoplasmic membrane protein WM43_RS09205 PF00206 Lyase WM43_RS09205 PF10415 Fumarase C C-terminus WM43_RS09210 PF03605 Anaerobic c4-dicarboxylate membrane transporter WM43_RS09215 PF00814 Glycoprotease family WM43_RS09220 PF01165 Ribosomal protein S21 WM43_RS09225 PF09424 Yqey-like protein WM43_RS09230 PF01807 CHC2 zinc finger WM43_RS09230 PF08275 DNA primase catalytic core, N-terminal domain WM43_RS09230 PF08278 DNA primase DnaG DnaB-binding WM43_RS09230 PF10410 DnaB-helicase binding domain of primase WM43_RS09235 PF00140 Sigma-70 factor, region 1.2 WM43_RS09235 PF04542 Sigma-70 region 2 WM43_RS09235 PF04546 Sigma-70, non-essential region WM43_RS09235 PF04539 Sigma-70 region 3 WM43_RS09235 PF04545 Sigma-70, region 4 WM43_RS09235 PF03979 Sigma-70 factor, region 1.1 WM43_RS09275 PF00589 Phage integrase family WM43_RS09275 PF14659 Phage integrase, N-terminal SAM-like domain WM43_RS09275 PF13356 Arm DNA-binding domain WM43_RS09290 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain WM43_RS09290 PF02843 Phosphoribosylglycinamide synthetase, C domain WM43_RS09290 PF02844 Phosphoribosylglycinamide synthetase, N domain WM43_RS09295 PF02142 MGS-like domain WM43_RS09295 PF01808 AICARFT/IMPCHase bienzyme WM43_RS09300 PF13411 MerR HTH family regulatory protein WM43_RS09305 PF03889 Alternative ribosome-rescue factor A WM43_RS09310 PF06969 HemN C-terminal domain WM43_RS09310 PF04055 Radical SAM superfamily WM43_RS09315 PF01725 Ham1 family WM43_RS09320 PF07690 Major Facilitator Superfamily WM43_RS09325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold WM43_RS09325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain WM43_RS09335 PF13302 Acetyltransferase (GNAT) domain WM43_RS09340 PF13302 Acetyltransferase (GNAT) domain WM43_RS09345 PF03413 Peptidase propeptide and YPEB domain WM43_RS09345 PF01447 Thermolysin metallopeptidase, catalytic domain WM43_RS09345 PF04151 Bacterial pre-peptidase C-terminal domain WM43_RS09345 PF07504 Fungalysin/Thermolysin Propeptide Motif WM43_RS09345 PF02868 Thermolysin metallopeptidase, alpha-helical domain WM43_RS09350 PF03466 LysR substrate binding domain WM43_RS09350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS09355 PF07690 Major Facilitator Superfamily WM43_RS09360 PF00583 Acetyltransferase (GNAT) family WM43_RS09365 PF16658 Class II release factor RF3, C-terminal domain WM43_RS09365 PF00009 Elongation factor Tu GTP binding domain WM43_RS09365 PF03144 Elongation factor Tu domain 2 WM43_RS09375 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS09380 PF05762 VWA domain containing CoxE-like protein WM43_RS09385 PF12592 Protein of unknown function (DUF3763) WM43_RS09385 PF17868 AAA lid domain WM43_RS09385 PF07728 AAA domain (dynein-related subfamily) WM43_RS09395 PF13673 Acetyltransferase (GNAT) domain WM43_RS09395 PF00583 Acetyltransferase (GNAT) family WM43_RS09405 PF00501 AMP-binding enzyme WM43_RS09410 PF04262 Glutamate-cysteine ligase WM43_RS09415 PF00675 Insulinase (Peptidase family M16) WM43_RS09415 PF05193 Peptidase M16 inactive domain WM43_RS09420 PF09335 SNARE associated Golgi protein WM43_RS09425 PF08240 Alcohol dehydrogenase GroES-like domain WM43_RS09425 PF14765 Polyketide synthase dehydratase WM43_RS09425 PF00550 Phosphopantetheine attachment site WM43_RS09425 PF00698 Acyl transferase domain WM43_RS09425 PF02801 Beta-ketoacyl synthase, C-terminal domain WM43_RS09425 PF08659 KR domain WM43_RS09425 PF00109 Beta-ketoacyl synthase, N-terminal domain WM43_RS09425 PF16197 Ketoacyl-synthetase C-terminal extension WM43_RS09445 PF00970 Oxidoreductase FAD-binding domain WM43_RS09445 PF00175 Oxidoreductase NAD-binding domain WM43_RS09450 PF03948 Ribosomal protein L9, C-terminal domain WM43_RS09450 PF01281 Ribosomal protein L9, N-terminal domain WM43_RS09455 PF01084 Ribosomal protein S18 WM43_RS09460 PF01250 Ribosomal protein S6 WM43_RS09465 PF01566 Natural resistance-associated macrophage protein WM43_RS09470 PF01411 tRNA synthetases class II (A) WM43_RS09470 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WM43_RS09470 PF02272 DHHA1 domain WM43_RS09480 PF00216 Bacterial DNA-binding protein WM43_RS09485 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ WM43_RS09490 PF07238 PilZ domain WM43_RS09495 PF18073 Rubredoxin metal binding domain WM43_RS09510 PF18429 Domain of unknown function (DUF5609) WM43_RS09520 PF01048 Phosphorylase superfamily WM43_RS09525 PF01676 Metalloenzyme superfamily WM43_RS09530 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain WM43_RS09530 PF00591 Glycosyl transferase family, a/b domain WM43_RS09530 PF02885 Glycosyl transferase family, helical bundle domain WM43_RS09535 PF01791 DeoC/LacD family aldolase WM43_RS09545 PF01773 Na+ dependent nucleoside transporter N-terminus WM43_RS09545 PF07670 Nucleoside recognition WM43_RS09545 PF07662 Na+ dependent nucleoside transporter C-terminus WM43_RS09550 PF01026 TatD related DNase WM43_RS09555 PF07963 Prokaryotic N-terminal methylation motif WM43_RS09560 PF02664 S-Ribosylhomocysteinase (LuxS) WM43_RS09570 PF00543 Nitrogen regulatory protein P-II WM43_RS09575 PF02540 NAD synthase WM43_RS09575 PF00795 Carbon-nitrogen hydrolase WM43_RS09595 PF05567 Neisseria PilC beta-propeller domain WM43_RS09610 PF07963 Prokaryotic N-terminal methylation motif WM43_RS09610 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor WM43_RS09615 PF02401 LytB protein WM43_RS09620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WM43_RS09625 PF01252 Signal peptidase (SPase) II WM43_RS09630 PF08264 Anticodon-binding domain of tRNA WM43_RS09630 PF00133 tRNA synthetases class I (I, L, M and V) WM43_RS09630 PF06827 Zinc finger found in FPG and IleRS WM43_RS09635 PF01687 Riboflavin kinase WM43_RS09635 PF06574 FAD synthetase WM43_RS09640 PF03023 Lipid II flippase MurJ WM43_RS09645 PF01649 Ribosomal protein S20 WM43_RS09650 PF01022 Bacterial regulatory protein, arsR family WM43_RS09655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS09655 PF03466 LysR substrate binding domain WM43_RS09665 PF06965 Na+/H+ antiporter 1 WM43_RS09670 PF00303 Thymidylate synthase WM43_RS09675 PF01790 Prolipoprotein diacylglyceryl transferase WM43_RS09680 PF02896 PEP-utilising enzyme, TIM barrel domain WM43_RS09680 PF00391 PEP-utilising enzyme, mobile domain WM43_RS09680 PF05524 PEP-utilising enzyme, N-terminal WM43_RS09680 PF01590 GAF domain WM43_RS09685 PF00293 NUDIX domain WM43_RS09690 PF02976 DNA mismatch repair enzyme MutH WM43_RS09700 PF01245 Ribosomal protein L19 WM43_RS09705 PF01746 tRNA (Guanine-1)-methyltransferase WM43_RS09710 PF05239 PRC-barrel domain WM43_RS09710 PF01782 RimM N-terminal domain WM43_RS09715 PF00886 Ribosomal protein S16 WM43_RS09720 PF02881 SRP54-type protein, helical bundle domain WM43_RS09720 PF02978 Signal peptide binding domain WM43_RS09720 PF00448 SRP54-type protein, GTPase domain WM43_RS09725 PF01578 Cytochrome C assembly protein WM43_RS09730 PF01595 Cyclin M transmembrane N-terminal domain WM43_RS09730 PF03471 Transporter associated domain WM43_RS09730 PF00571 CBS domain WM43_RS09735 PF02082 Transcriptional regulator WM43_RS09740 PF00175 Oxidoreductase NAD-binding domain WM43_RS09740 PF00042 Globin WM43_RS09740 PF00970 Oxidoreductase FAD-binding domain WM43_RS09745 PF08238 Sel1 repeat WM43_RS09750 PF00056 lactate/malate dehydrogenase, NAD binding domain WM43_RS09750 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain WM43_RS09755 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS09760 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS09765 PF00497 Bacterial extracellular solute-binding proteins, family 3 WM43_RS09770 PF00005 ABC transporter WM43_RS09775 PF01316 Arginine repressor, DNA binding domain WM43_RS09775 PF02863 Arginine repressor, C-terminal domain WM43_RS09780 PF04261 Dyp-type peroxidase family WM43_RS09785 PF08402 TOBE domain WM43_RS09785 PF00005 ABC transporter WM43_RS09795 PF13416 Bacterial extracellular solute-binding protein WM43_RS09800 PF00543 Nitrogen regulatory protein P-II WM43_RS09805 PF00472 RF-1 domain WM43_RS09810 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain WM43_RS09810 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain WM43_RS09820 PF03883 Peroxide stress protein YaaA WM43_RS09825 PF00437 Type II/IV secretion system protein WM43_RS09830 PF00437 Type II/IV secretion system protein WM43_RS09835 PF01168 Alanine racemase, N-terminal domain WM43_RS09840 PF14748 Pyrroline-5-carboxylate reductase dimerisation WM43_RS09840 PF03807 NADP oxidoreductase coenzyme F420-dependent WM43_RS09845 PF02325 YGGT family WM43_RS09850 PF02594 Uncharacterised ACR, YggU family COG1872 WM43_RS09860 PF01773 Na+ dependent nucleoside transporter N-terminus WM43_RS09860 PF07670 Nucleoside recognition WM43_RS09860 PF07662 Na+ dependent nucleoside transporter C-terminus WM43_RS09865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS09865 PF03466 LysR substrate binding domain WM43_RS09870 PF00255 Glutathione peroxidase WM43_RS09880 PF02595 Glycerate kinase family WM43_RS09885 PF02447 GntP family permease WM43_RS09890 PF05651 Putative sugar diacid recognition WM43_RS09890 PF17853 GGDEF-like domain WM43_RS09890 PF13556 PucR C-terminal helix-turn-helix domain WM43_RS09895 PF06062 Uncharacterised protein family (UPF0231) WM43_RS09915 PF03372 Endonuclease/Exonuclease/phosphatase family WM43_RS09925 PF00271 Helicase conserved C-terminal domain WM43_RS09925 PF00270 DEAD/DEAH box helicase WM43_RS09935 PF08534 Redoxin WM43_RS09940 PF00403 Heavy-metal-associated domain WM43_RS09945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) WM43_RS09945 PF11852 Domain of unknown function (DUF3372) WM43_RS09945 PF03714 Bacterial pullanase-associated domain WM43_RS09945 PF18494 Pullulanase Ins domain WM43_RS09945 PF17967 Pullulanase N2 domain WM43_RS09960 PF02583 Metal-sensitive transcriptional repressor WM43_RS09965 PF00155 Aminotransferase class I and II WM43_RS09970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS09970 PF03466 LysR substrate binding domain WM43_RS09980 PF04055 Radical SAM superfamily WM43_RS09985 PF11230 Protein of unknown function (DUF3029) WM43_RS10010 PF00970 Oxidoreductase FAD-binding domain WM43_RS10010 PF00111 2Fe-2S iron-sulfur cluster binding domain WM43_RS10010 PF00175 Oxidoreductase NAD-binding domain WM43_RS10025 PF17200 Single Cache domain 2 WM43_RS10025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS10025 PF00672 HAMP domain WM43_RS10030 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading WM43_RS10030 PF18416 N-acetylglucosamine binding protein domain 2 WM43_RS10035 PF03466 LysR substrate binding domain WM43_RS10035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS10040 PF12857 TOBE-like domain WM43_RS10040 PF00005 ABC transporter WM43_RS10045 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS10050 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS10065 PF13194 Domain of unknown function (DUF4010) WM43_RS10070 PF12464 Maltose acetyltransferase WM43_RS10070 PF14602 Hexapeptide repeat of succinyl-transferase WM43_RS10085 PF13419 Haloacid dehalogenase-like hydrolase WM43_RS10090 PF00293 NUDIX domain WM43_RS10095 PF00459 Inositol monophosphatase family WM43_RS10100 PF03222 Tryptophan/tyrosine permease family WM43_RS10105 PF01588 Putative tRNA binding domain WM43_RS10110 PF02311 AraC-like ligand binding domain WM43_RS10110 PF12833 Helix-turn-helix domain WM43_RS10115 PF01340 Met Apo-repressor, MetJ WM43_RS10120 PF01053 Cys/Met metabolism PLP-dependent enzyme WM43_RS10125 PF03447 Homoserine dehydrogenase, NAD binding domain WM43_RS10125 PF00742 Homoserine dehydrogenase WM43_RS10125 PF00696 Amino acid kinase family WM43_RS10130 PF01384 Phosphate transporter family WM43_RS10135 PF01865 Protein of unknown function DUF47 WM43_RS10145 PF00701 Dihydrodipicolinate synthetase family WM43_RS10150 PF05175 Methyltransferase small domain WM43_RS10150 PF08468 Methyltransferase small domain N-terminal WM43_RS10155 PF00483 Nucleotidyl transferase WM43_RS10160 PF08323 Starch synthase catalytic domain WM43_RS10160 PF00534 Glycosyl transferases group 1 WM43_RS10200 PF03553 Na+/H+ antiporter family WM43_RS10205 PF01521 Iron-sulphur cluster biosynthesis WM43_RS10215 PF00654 Voltage gated chloride channel WM43_RS10220 PF00202 Aminotransferase class-III WM43_RS10235 PF06965 Na+/H+ antiporter 1 WM43_RS10235 PF13462 Thioredoxin WM43_RS10265 PF18339 RapA N-terminal Tudor like domain 1 WM43_RS10265 PF00176 SNF2 family N-terminal domain WM43_RS10265 PF12137 RNA polymerase recycling family C-terminal WM43_RS10265 PF00271 Helicase conserved C-terminal domain WM43_RS10265 PF18337 RapA N-terminal Tudor like domain WM43_RS10270 PF00849 RNA pseudouridylate synthase WM43_RS10280 PF14602 Hexapeptide repeat of succinyl-transferase WM43_RS10280 PF12464 Maltose acetyltransferase WM43_RS10285 PF00128 Alpha amylase, catalytic domain WM43_RS10285 PF11941 Domain of unknown function (DUF3459) WM43_RS10290 PF00367 phosphotransferase system, EIIB WM43_RS10290 PF02378 Phosphotransferase system, EIIC WM43_RS10295 PF00356 Bacterial regulatory proteins, lacI family WM43_RS10310 PF00710 Asparaginase, N-terminal WM43_RS10310 PF17763 Glutaminase/Asparaginase C-terminal domain WM43_RS10315 PF00571 CBS domain WM43_RS10315 PF03471 Transporter associated domain WM43_RS10315 PF01595 Cyclin M transmembrane N-terminal domain WM43_RS10320 PF09335 SNARE associated Golgi protein WM43_RS10325 PF00768 D-alanyl-D-alanine carboxypeptidase WM43_RS10360 PF01842 ACT domain WM43_RS10360 PF00696 Amino acid kinase family WM43_RS10360 PF13840 ACT domain WM43_RS10365 PF02272 DHHA1 domain WM43_RS10365 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WM43_RS10365 PF01411 tRNA synthetases class II (A) WM43_RS10370 PF02631 RecX family WM43_RS10375 PF00154 recA bacterial DNA recombination protein WM43_RS10380 PF02464 Competence-damaged protein WM43_RS10385 PF01624 MutS domain I WM43_RS10385 PF05192 MutS domain III WM43_RS10385 PF05190 MutS family domain IV WM43_RS10385 PF00488 MutS domain V WM43_RS10385 PF05188 MutS domain II WM43_RS10390 PF01734 Patatin-like phospholipase WM43_RS10400 PF04172 LrgB-like family WM43_RS10405 PF03788 LrgA family WM43_RS10410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS10410 PF03466 LysR substrate binding domain WM43_RS10420 PF04073 Aminoacyl-tRNA editing domain WM43_RS10440 PF06968 Biotin and Thiamin Synthesis associated domain WM43_RS10440 PF04055 Radical SAM superfamily WM43_RS10445 PF05690 Thiazole biosynthesis protein ThiG WM43_RS10455 PF00899 ThiF family WM43_RS10460 PF02581 Thiamine monophosphate synthase WM43_RS10465 PF01964 Radical SAM ThiC family WM43_RS10465 PF13667 ThiC-associated domain WM43_RS10470 PF03440 Aerolysin/Pertussis toxin (APT) domain WM43_RS10470 PF01117 Aerolysin toxin WM43_RS10485 PF00486 Transcriptional regulatory protein, C terminal WM43_RS10485 PF00072 Response regulator receiver domain WM43_RS10490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS10495 PF08443 RimK-like ATP-grasp domain WM43_RS10495 PF18030 RimK PreATP-grasp domain WM43_RS10500 PF02574 Homocysteine S-methyltransferase WM43_RS10500 PF02607 B12 binding domain WM43_RS10500 PF02965 Vitamin B12 dependent methionine synthase, activation domain WM43_RS10500 PF02310 B12 binding domain WM43_RS10500 PF00809 Pterin binding enzyme WM43_RS10505 PF00999 Sodium/hydrogen exchanger family WM43_RS10525 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) WM43_RS10535 PF07690 Major Facilitator Superfamily WM43_RS10540 PF01914 MarC family integral membrane protein WM43_RS10550 PF01523 Putative modulator of DNA gyrase WM43_RS10555 PF00795 Carbon-nitrogen hydrolase WM43_RS10570 PF13502 AsmA-like C-terminal region WM43_RS10570 PF13116 Protein of unknown function WM43_RS10575 PF10150 Ribonuclease E/G family WM43_RS10575 PF00575 S1 RNA binding domain WM43_RS10580 PF02545 Maf-like protein WM43_RS10585 PF04093 rod shape-determining protein MreD WM43_RS10590 PF04085 rod shape-determining protein MreC WM43_RS10620 PF14245 Type IV pilin PilA WM43_RS10620 PF07963 Prokaryotic N-terminal methylation motif WM43_RS10625 PF00114 Pilin (bacterial filament) WM43_RS10625 PF07963 Prokaryotic N-terminal methylation motif WM43_RS10640 PF00482 Type II secretion system (T2SS), protein F WM43_RS10645 PF00437 Type II/IV secretion system protein WM43_RS10645 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain WM43_RS10660 PF03958 Bacterial type II/III secretion system short domain WM43_RS10660 PF00263 Bacterial type II and III secretion system protein WM43_RS10690 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS10690 PF00563 EAL domain WM43_RS10690 PF17157 Gammaproteobacterial periplasmic sensor domain WM43_RS10705 PF00563 EAL domain WM43_RS10705 PF12792 CSS motif domain associated with EAL WM43_RS10710 PF01699 Sodium/calcium exchanger protein WM43_RS10715 PF00221 Aromatic amino acid lyase WM43_RS10720 PF01175 Urocanase Rossmann-like domain WM43_RS10720 PF17391 Urocanase N-terminal domain WM43_RS10720 PF17392 Urocanase C-terminal domain WM43_RS10725 PF00491 Arginase family WM43_RS10730 PF01979 Amidohydrolase family WM43_RS10735 PF00392 Bacterial regulatory proteins, gntR family WM43_RS10735 PF07702 UTRA domain WM43_RS10740 PF00484 Carbonic anhydrase WM43_RS10745 PF00140 Sigma-70 factor, region 1.2 WM43_RS10745 PF04545 Sigma-70, region 4 WM43_RS10745 PF04542 Sigma-70 region 2 WM43_RS10750 PF18075 FtsX extracellular domain WM43_RS10755 PF00005 ABC transporter WM43_RS10760 PF00448 SRP54-type protein, GTPase domain WM43_RS10760 PF02881 SRP54-type protein, helical bundle domain WM43_RS10785 PF02254 TrkA-N domain WM43_RS10785 PF00999 Sodium/hydrogen exchanger family WM43_RS10790 PF02525 Flavodoxin-like fold WM43_RS10795 PF03466 LysR substrate binding domain WM43_RS10795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS10800 PF00106 short chain dehydrogenase WM43_RS10815 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain WM43_RS10815 PF00326 Prolyl oligopeptidase family WM43_RS10830 PF13091 PLD-like domain WM43_RS10835 PF00497 Bacterial extracellular solute-binding proteins, family 3 WM43_RS10835 PF01464 Transglycosylase SLT domain WM43_RS10845 PF02416 mttA/Hcf106 family WM43_RS10850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS10850 PF03466 LysR substrate binding domain WM43_RS10855 PF01914 MarC family integral membrane protein WM43_RS10860 PF10678 Protein of unknown function (DUF2492) WM43_RS10865 PF00375 Sodium:dicarboxylate symporter family WM43_RS10875 PF03466 LysR substrate binding domain WM43_RS10875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS10880 PF13533 Biotin-lipoyl like WM43_RS10885 PF07690 Major Facilitator Superfamily WM43_RS10890 PF07947 YhhN family WM43_RS10900 PF00440 Bacterial regulatory proteins, tetR family WM43_RS10905 PF07226 Protein of unknown function (DUF1422) WM43_RS10940 PF03143 Elongation factor Tu C-terminal domain WM43_RS10940 PF03144 Elongation factor Tu domain 2 WM43_RS10940 PF00009 Elongation factor Tu GTP binding domain WM43_RS10945 PF00679 Elongation factor G C-terminus WM43_RS10945 PF00009 Elongation factor Tu GTP binding domain WM43_RS10945 PF03764 Elongation factor G, domain IV WM43_RS10945 PF14492 Elongation Factor G, domain II WM43_RS10945 PF03144 Elongation factor Tu domain 2 WM43_RS10950 PF00177 Ribosomal protein S7p/S5e WM43_RS10955 PF00164 Ribosomal protein S12/S23 WM43_RS10960 PF04077 DsrH like protein WM43_RS10965 PF02635 DsrE/DsrF-like family WM43_RS10970 PF02635 DsrE/DsrF-like family WM43_RS10975 PF01042 Endoribonuclease L-PSP WM43_RS10980 PF08348 YheO-like PAS domain WM43_RS10980 PF13309 HTH domain WM43_RS10985 PF05000 RNA polymerase Rpb1, domain 4 WM43_RS10985 PF04983 RNA polymerase Rpb1, domain 3 WM43_RS10985 PF00623 RNA polymerase Rpb1, domain 2 WM43_RS10985 PF04997 RNA polymerase Rpb1, domain 1 WM43_RS10985 PF04998 RNA polymerase Rpb1, domain 5 WM43_RS10990 PF00562 RNA polymerase Rpb2, domain 6 WM43_RS10990 PF10385 RNA polymerase beta subunit external 1 domain WM43_RS10990 PF04560 RNA polymerase Rpb2, domain 7 WM43_RS10990 PF04565 RNA polymerase Rpb2, domain 3 WM43_RS10990 PF04561 RNA polymerase Rpb2, domain 2 WM43_RS10990 PF04563 RNA polymerase beta subunit WM43_RS10995 PF00542 Ribosomal protein L7/L12 C-terminal domain WM43_RS10995 PF16320 Ribosomal protein L7/L12 dimerisation domain WM43_RS11000 PF00466 Ribosomal protein L10 WM43_RS11005 PF00687 Ribosomal protein L1p/L10e family WM43_RS11010 PF03946 Ribosomal protein L11, N-terminal domain WM43_RS11010 PF00298 Ribosomal protein L11, RNA binding domain WM43_RS11015 PF00467 KOW motif WM43_RS11015 PF02357 Transcription termination factor nusG WM43_RS11020 PF00584 SecE/Sec61-gamma subunits of protein translocation complex WM43_RS11030 PF03144 Elongation factor Tu domain 2 WM43_RS11030 PF03143 Elongation factor Tu C-terminal domain WM43_RS11030 PF00009 Elongation factor Tu GTP binding domain WM43_RS11045 PF00485 Phosphoribulokinase / Uridine kinase family WM43_RS11050 PF03099 Biotin/lipoate A/B protein ligase family WM43_RS11050 PF08279 HTH domain WM43_RS11050 PF02237 Biotin protein ligase C terminal domain WM43_RS11055 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain WM43_RS11055 PF01565 FAD binding domain WM43_RS11060 PF02080 TrkA-C domain WM43_RS11060 PF02254 TrkA-N domain WM43_RS11065 PF02386 Cation transport protein WM43_RS11085 PF01751 Toprim domain WM43_RS11085 PF01131 DNA topoisomerase WM43_RS11095 PF00497 Bacterial extracellular solute-binding proteins, family 3 WM43_RS11095 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS11095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS11100 PF03264 NapC/NirT cytochrome c family, N-terminal region WM43_RS11105 PF01568 Molydopterin dinucleotide binding domain WM43_RS11105 PF18364 Molybdopterin oxidoreductase N-terminal domain WM43_RS11105 PF00384 Molybdopterin oxidoreductase WM43_RS11115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS11120 PF00072 Response regulator receiver domain WM43_RS11120 PF00486 Transcriptional regulatory protein, C terminal WM43_RS11135 PF01794 Ferric reductase like transmembrane component WM43_RS11140 PF00174 Oxidoreductase molybdopterin binding domain WM43_RS11145 PF06496 Protein of unknown function (DUF1097) WM43_RS11150 PF00158 Sigma-54 interaction domain WM43_RS11150 PF00072 Response regulator receiver domain WM43_RS11160 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS11160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS11175 PF00478 IMP dehydrogenase / GMP reductase domain WM43_RS11175 PF00571 CBS domain WM43_RS11180 PF10063 Uncharacterized integral membrane protein (DUF2301) WM43_RS11190 PF01037 Lrp/AsnC ligand binding domain WM43_RS11195 PF03590 Aspartate-ammonia ligase WM43_RS11200 PF02861 Clp amino terminal domain, pathogenicity island component WM43_RS11200 PF07724 AAA domain (Cdc48 subfamily) WM43_RS11200 PF10431 C-terminal, D2-small domain, of ClpB protein WM43_RS11200 PF00004 ATPase family associated with various cellular activities (AAA) WM43_RS11200 PF17871 AAA lid domain WM43_RS11205 PF02578 Multi-copper polyphenol oxidoreductase laccase WM43_RS11210 PF00849 RNA pseudouridylate synthase WM43_RS11210 PF01479 S4 domain WM43_RS11215 PF13525 Outer membrane lipoprotein WM43_RS11220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WM43_RS11220 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM43_RS11225 PF00375 Sodium:dicarboxylate symporter family WM43_RS11230 PF03313 Serine dehydratase alpha chain WM43_RS11235 PF08348 YheO-like PAS domain WM43_RS11235 PF13309 HTH domain WM43_RS11245 PF02233 NAD(P) transhydrogenase beta subunit WM43_RS11250 PF05222 Alanine dehydrogenase/PNT, N-terminal domain WM43_RS11250 PF01262 Alanine dehydrogenase/PNT, C-terminal domain WM43_RS11250 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch WM43_RS11255 PF00465 Iron-containing alcohol dehydrogenase WM43_RS11260 PF12833 Helix-turn-helix domain WM43_RS11260 PF06719 AraC-type transcriptional regulator N-terminus WM43_RS11265 PF08212 Lipocalin-like domain WM43_RS11270 PF02743 Cache domain WM43_RS11270 PF00672 HAMP domain WM43_RS11270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS11280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS11280 PF03466 LysR substrate binding domain WM43_RS11295 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WM43_RS11295 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WM43_RS11300 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain WM43_RS11300 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain WM43_RS11305 PF02863 Arginine repressor, C-terminal domain WM43_RS11305 PF01316 Arginine repressor, DNA binding domain WM43_RS11310 PF03606 C4-dicarboxylate anaerobic carrier WM43_RS11315 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WM43_RS11315 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WM43_RS11320 PF00696 Amino acid kinase family WM43_RS11340 PF04055 Radical SAM superfamily WM43_RS11340 PF06969 HemN C-terminal domain WM43_RS11345 PF10675 Protein of unknown function (DUF2489) WM43_RS11350 PF04220 Der GTPase activator (YihI) WM43_RS11360 PF00034 Cytochrome c WM43_RS11365 PF01926 50S ribosome-binding GTPase WM43_RS11380 PF08501 Shikimate dehydrogenase substrate binding domain WM43_RS11380 PF01488 Shikimate / quinate 5-dehydrogenase WM43_RS11380 PF18317 Shikimate 5'-dehydrogenase C-terminal domain WM43_RS11385 PF01218 Coproporphyrinogen III oxidase WM43_RS11390 PF01300 Telomere recombination WM43_RS11395 PF00731 AIR carboxylase WM43_RS11400 PF01396 Topoisomerase DNA binding C4 zinc finger WM43_RS11405 PF04361 Protein of unknown function (DUF494) WM43_RS11410 PF17782 DprA winged helix domain WM43_RS11410 PF02481 DNA recombination-mediator protein A WM43_RS11415 PF01476 LysM domain WM43_RS11420 PF01327 Polypeptide deformylase WM43_RS11425 PF02911 Formyl transferase, C-terminal domain WM43_RS11425 PF00551 Formyl transferase WM43_RS11430 PF01029 NusB family WM43_RS11430 PF01189 16S rRNA methyltransferase RsmB/F WM43_RS11435 PF02080 TrkA-C domain WM43_RS11435 PF02254 TrkA-N domain WM43_RS11440 PF02386 Cation transport protein WM43_RS11445 PF00679 Elongation factor G C-terminus WM43_RS11445 PF00009 Elongation factor Tu GTP binding domain WM43_RS11445 PF03144 Elongation factor Tu domain 2 WM43_RS11450 PF00120 Glutamine synthetase, catalytic domain WM43_RS11450 PF03951 Glutamine synthetase, beta-Grasp domain WM43_RS11460 PF00989 PAS fold WM43_RS11460 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS11460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS11465 PF02954 Bacterial regulatory protein, Fis family WM43_RS11465 PF00072 Response regulator receiver domain WM43_RS11465 PF00158 Sigma-54 interaction domain WM43_RS11470 PF00962 Adenosine/AMP deaminase WM43_RS11475 PF02646 RmuC family WM43_RS11490 PF02082 Transcriptional regulator WM43_RS11495 PF00294 pfkB family carbohydrate kinase WM43_RS11500 PF03466 LysR substrate binding domain WM43_RS11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS11505 PF02540 NAD synthase WM43_RS11505 PF00117 Glutamine amidotransferase class-I WM43_RS11505 PF00958 GMP synthase C terminal domain WM43_RS11510 PF00171 Aldehyde dehydrogenase family WM43_RS11515 PF00202 Aminotransferase class-III WM43_RS11520 PF07883 Cupin domain WM43_RS11520 PF01381 Helix-turn-helix WM43_RS11525 PF00171 Aldehyde dehydrogenase family WM43_RS11530 PF00892 EamA-like transporter family WM43_RS11540 PF04143 Sulphur transport WM43_RS11545 PF00691 OmpA family WM43_RS11545 PF01389 OmpA-like transmembrane domain WM43_RS11550 PF00291 Pyridoxal-phosphate dependent enzyme WM43_RS11550 PF00585 C-terminal regulatory domain of Threonine dehydratase WM43_RS11555 PF00920 Dehydratase family WM43_RS11560 PF01063 Amino-transferase class IV WM43_RS11570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WM43_RS11570 PF00205 Thiamine pyrophosphate enzyme, central domain WM43_RS11570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WM43_RS11575 PF01078 Magnesium chelatase, subunit ChlI WM43_RS11575 PF13335 Magnesium chelatase, subunit ChlI C-terminal WM43_RS11580 PF01553 Acyltransferase WM43_RS11585 PF01553 Acyltransferase WM43_RS11590 PF04463 Protein of unknown function (DUF523) WM43_RS11600 PF00857 Isochorismatase family WM43_RS11605 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family WM43_RS11605 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain WM43_RS11610 PF01323 DSBA-like thioredoxin domain WM43_RS11615 PF01636 Phosphotransferase enzyme family WM43_RS11620 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase WM43_RS11620 PF13746 4Fe-4S dicluster domain WM43_RS11620 PF12801 4Fe-4S binding domain WM43_RS11625 PF06288 Protein of unknown function (DUF1040) WM43_RS11630 PF00360 Phytochrome region WM43_RS11630 PF01590 GAF domain WM43_RS11630 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS11630 PF00563 EAL domain WM43_RS11635 PF13411 MerR HTH family regulatory protein WM43_RS11640 PF00403 Heavy-metal-associated domain WM43_RS11645 PF00156 Phosphoribosyl transferase domain WM43_RS11650 PF03725 3' exoribonuclease family, domain 2 WM43_RS11650 PF01138 3' exoribonuclease family, domain 1 WM43_RS11655 PF03755 YicC-like family, N-terminal region WM43_RS11655 PF08340 Domain of unknown function (DUF1732) WM43_RS11660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS11660 PF03466 LysR substrate binding domain WM43_RS11665 PF00107 Zinc-binding dehydrogenase WM43_RS11665 PF08240 Alcohol dehydrogenase GroES-like domain WM43_RS11670 PF00756 Putative esterase WM43_RS11675 PF03466 LysR substrate binding domain WM43_RS11675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS11715 PF12867 DinB superfamily WM43_RS11715 PF03781 Sulfatase-modifying factor enzyme 1 WM43_RS11720 PF13593 SBF-like CPA transporter family (DUF4137) WM43_RS11725 PF13520 Amino acid permease WM43_RS11730 PF01588 Putative tRNA binding domain WM43_RS11735 PF13520 Amino acid permease WM43_RS11740 PF04074 YhcH/YjgK/YiaL WM43_RS11745 PF02929 Beta galactosidase small chain WM43_RS11745 PF16353 Domain of unknown function(DUF4981) WM43_RS11745 PF00703 Glycosyl hydrolases family 2 WM43_RS11745 PF02836 Glycosyl hydrolases family 2, TIM barrel domain WM43_RS11745 PF02837 Glycosyl hydrolases family 2, sugar binding domain WM43_RS11750 PF00356 Bacterial regulatory proteins, lacI family WM43_RS11785 PF00132 Bacterial transferase hexapeptide (six repeats) WM43_RS11790 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain WM43_RS11790 PF01367 5'-3' exonuclease, C-terminal SAM fold WM43_RS11790 PF00476 DNA polymerase family A WM43_RS11790 PF01612 3'-5' exonuclease WM43_RS11800 PF06005 Cell division protein ZapB WM43_RS11810 PF06426 Serine acetyltransferase, N-terminal WM43_RS11810 PF00132 Bacterial transferase hexapeptide (six repeats) WM43_RS11815 PF01545 Cation efflux family WM43_RS11815 PF16916 Dimerisation domain of Zinc Transporter WM43_RS11820 PF00486 Transcriptional regulatory protein, C terminal WM43_RS11820 PF00072 Response regulator receiver domain WM43_RS11825 PF00672 HAMP domain WM43_RS11825 PF16527 Two-component sensor protein CpxA, periplasmic domain WM43_RS11825 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS11825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS11830 PF00588 SpoU rRNA Methylase family WM43_RS11835 PF01554 MatE WM43_RS11840 PF02630 SCO1/SenC WM43_RS11850 PF01726 LexA DNA binding domain WM43_RS11850 PF00717 Peptidase S24-like WM43_RS11855 PF01553 Acyltransferase WM43_RS11860 PF01040 UbiA prenyltransferase family WM43_RS11865 PF04345 Chorismate lyase WM43_RS11885 PF08240 Alcohol dehydrogenase GroES-like domain WM43_RS11885 PF00107 Zinc-binding dehydrogenase WM43_RS11890 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family WM43_RS11890 PF00356 Bacterial regulatory proteins, lacI family WM43_RS11895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 WM43_RS11905 PF03611 PTS system sugar-specific permease component WM43_RS11910 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) WM43_RS11915 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WM43_RS11920 PF00535 Glycosyl transferase family 2 WM43_RS11925 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WM43_RS11930 PF01467 Cytidylyltransferase-like WM43_RS11935 PF04393 Protein of unknown function (DUF535) WM43_RS11940 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain WM43_RS11940 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain WM43_RS11940 PF06827 Zinc finger found in FPG and IleRS WM43_RS11950 PF00471 Ribosomal protein L33 WM43_RS11955 PF00830 Ribosomal L28 family WM43_RS11960 PF04002 RadC-like JAB domain WM43_RS11965 PF04127 DNA / pantothenate metabolism flavoprotein WM43_RS11965 PF02441 Flavoprotein WM43_RS11970 PF00692 dUTPase WM43_RS11975 PF00440 Bacterial regulatory proteins, tetR family WM43_RS11980 PF00924 Mechanosensitive ion channel WM43_RS11980 PF05552 Conserved TM helix WM43_RS11985 PF00342 Phosphoglucose isomerase WM43_RS11990 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain WM43_RS11990 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain WM43_RS11995 PF03466 LysR substrate binding domain WM43_RS11995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS12010 PF00583 Acetyltransferase (GNAT) family WM43_RS12010 PF13380 CoA binding domain WM43_RS12010 PF13607 Succinyl-CoA ligase like flavodoxin domain WM43_RS12040 PF12724 Flavodoxin domain WM43_RS12045 PF02386 Cation transport protein WM43_RS12050 PF01205 Uncharacterized protein family UPF0029 WM43_RS12050 PF09186 Domain of unknown function (DUF1949) WM43_RS12055 PF00557 Metallopeptidase family M24 WM43_RS12060 PF00501 AMP-binding enzyme WM43_RS12060 PF13193 AMP-binding enzyme C-terminal domain WM43_RS12065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WM43_RS12065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WM43_RS12065 PF00378 Enoyl-CoA hydratase/isomerase WM43_RS12070 PF02803 Thiolase, C-terminal domain WM43_RS12070 PF00108 Thiolase, N-terminal domain WM43_RS12075 PF00486 Transcriptional regulatory protein, C terminal WM43_RS12075 PF00072 Response regulator receiver domain WM43_RS12080 PF00672 HAMP domain WM43_RS12080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS12080 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS12085 PF01547 Bacterial extracellular solute-binding protein WM43_RS12095 PF01206 Sulfurtransferase TusA WM43_RS12100 PF01042 Endoribonuclease L-PSP WM43_RS12105 PF00691 OmpA family WM43_RS12105 PF13488 Glycine zipper WM43_RS12110 PF03352 Methyladenine glycosylase WM43_RS12115 PF02091 Glycyl-tRNA synthetase alpha subunit WM43_RS12120 PF02092 Glycyl-tRNA synthetase beta subunit WM43_RS12120 PF05746 DALR anticodon binding domain WM43_RS12130 PF12792 CSS motif domain associated with EAL WM43_RS12130 PF00563 EAL domain WM43_RS12140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS12140 PF00672 HAMP domain WM43_RS12140 PF17200 Single Cache domain 2 WM43_RS12145 PF00392 Bacterial regulatory proteins, gntR family WM43_RS12145 PF07702 UTRA domain WM43_RS12150 PF00367 phosphotransferase system, EIIB WM43_RS12150 PF02378 Phosphotransferase system, EIIC WM43_RS12155 PF11975 Family 4 glycosyl hydrolase C-terminal domain WM43_RS12155 PF02056 Family 4 glycosyl hydrolase WM43_RS12160 PF00356 Bacterial regulatory proteins, lacI family WM43_RS12165 PF13458 Periplasmic binding protein WM43_RS12170 PF02653 Branched-chain amino acid transport system / permease component WM43_RS12175 PF02653 Branched-chain amino acid transport system / permease component WM43_RS12175 PF11862 Domain of unknown function (DUF3382) WM43_RS12180 PF12399 Branched-chain amino acid ATP-binding cassette transporter WM43_RS12180 PF00005 ABC transporter WM43_RS12185 PF00005 ABC transporter WM43_RS12190 PF00581 Rhodanese-like domain WM43_RS12195 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease WM43_RS12195 PF01694 Rhomboid family WM43_RS12200 PF12262 Bacterial virulence factor lipase N-terminal WM43_RS12205 PF04380 Membrane fusogenic activity WM43_RS12210 PF08448 PAS fold WM43_RS12210 PF08447 PAS fold WM43_RS12210 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS12210 PF00563 EAL domain WM43_RS12215 PF00175 Oxidoreductase NAD-binding domain WM43_RS12220 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase WM43_RS12230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WM43_RS12230 PF07497 Rho termination factor, RNA-binding domain WM43_RS12230 PF07498 Rho termination factor, N-terminal domain WM43_RS12235 PF00085 Thioredoxin WM43_RS12240 PF00271 Helicase conserved C-terminal domain WM43_RS12240 PF00270 DEAD/DEAH box helicase WM43_RS12245 PF02541 Ppx/GppA phosphatase family WM43_RS12255 PF04445 Putative SAM-dependent methyltransferase WM43_RS12260 PF03707 Bacterial signalling protein N terminal repeat WM43_RS12260 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS12260 PF00563 EAL domain WM43_RS12265 PF01432 Peptidase family M3 WM43_RS12270 PF00704 Glycosyl hydrolases family 18 WM43_RS12275 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading WM43_RS12275 PF18416 N-acetylglucosamine binding protein domain 2 WM43_RS12280 PF00490 Delta-aminolevulinic acid dehydratase WM43_RS12285 PF01026 TatD related DNase WM43_RS12290 PF00902 Sec-independent protein translocase protein (TatC) WM43_RS12295 PF02416 mttA/Hcf106 family WM43_RS12300 PF02416 mttA/Hcf106 family WM43_RS12305 PF03109 ABC1 family WM43_RS12310 PF02036 SCP-2 sterol transfer family WM43_RS12315 PF01209 ubiE/COQ5 methyltransferase family WM43_RS12320 PF02537 CrcB-like protein, Camphor Resistance (CrcB) WM43_RS12325 PF07969 Amidohydrolase family WM43_RS12330 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin WM43_RS12370 PF03544 Gram-negative bacterial TonB protein C-terminal WM43_RS12375 PF02472 Biopolymer transport protein ExbD/TolR WM43_RS12380 PF01618 MotA/TolQ/ExbB proton channel family WM43_RS12385 PF01618 MotA/TolQ/ExbB proton channel family WM43_RS12395 PF00196 Bacterial regulatory proteins, luxR family WM43_RS12395 PF03472 Autoinducer binding domain WM43_RS12400 PF01380 SIS domain WM43_RS12405 PF00455 DeoR C terminal sensor domain WM43_RS12405 PF08220 DeoR-like helix-turn-helix domain WM43_RS12410 PF00072 Response regulator receiver domain WM43_RS12410 PF00486 Transcriptional regulatory protein, C terminal WM43_RS12415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS12415 PF00672 HAMP domain WM43_RS12415 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS12420 PF00905 Penicillin binding protein transpeptidase domain WM43_RS12430 PF06123 Inner membrane protein CreD WM43_RS12445 PF13439 Glycosyltransferase Family 4 WM43_RS12445 PF00534 Glycosyl transferases group 1 WM43_RS12475 PF13614 AAA domain WM43_RS12475 PF13807 G-rich domain on putative tyrosine kinase WM43_RS12475 PF02706 Chain length determinant protein WM43_RS12490 PF02397 Bacterial sugar transferase WM43_RS12495 PF12804 MobA-like NTP transferase domain WM43_RS12495 PF00132 Bacterial transferase hexapeptide (six repeats) WM43_RS12495 PF14602 Hexapeptide repeat of succinyl-transferase WM43_RS12500 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain WM43_RS12500 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain WM43_RS12505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WM43_RS12505 PF02874 ATP synthase alpha/beta family, beta-barrel domain WM43_RS12510 PF00231 ATP synthase WM43_RS12515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WM43_RS12515 PF00306 ATP synthase alpha/beta chain, C terminal domain WM43_RS12515 PF02874 ATP synthase alpha/beta family, beta-barrel domain WM43_RS12520 PF00213 ATP synthase delta (OSCP) subunit WM43_RS12525 PF00430 ATP synthase B/B' CF(0) WM43_RS12530 PF00137 ATP synthase subunit C WM43_RS12535 PF00119 ATP synthase A chain WM43_RS12545 PF17762 HTH domain found in ParB protein WM43_RS12545 PF02195 ParB-like nuclease domain WM43_RS12550 PF13614 AAA domain WM43_RS12555 PF02527 rRNA small subunit methyltransferase G WM43_RS12560 PF01134 Glucose inhibited division protein A WM43_RS12560 PF13932 GidA associated domain WM43_RS12565 PF00258 Flavodoxin WM43_RS12570 PF00593 TonB dependent receptor WM43_RS12570 PF07715 TonB-dependent Receptor Plug Domain WM43_RS12575 PF00005 ABC transporter WM43_RS12580 PF00005 ABC transporter WM43_RS12585 PF01497 Periplasmic binding protein WM43_RS12590 PF01032 FecCD transport family WM43_RS12595 PF12631 MnmE helical domain WM43_RS12595 PF01926 50S ribosome-binding GTPase WM43_RS12595 PF10396 GTP-binding protein TrmE N-terminus WM43_RS12600 PF02096 60Kd inner membrane protein WM43_RS12600 PF14849 YidC periplasmic domain WM43_RS12605 PF00825 Ribonuclease P WM43_RS12610 PF00468 Ribosomal protein L34 WM43_RS12615 PF00005 ABC transporter WM43_RS12620 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS12625 PF00497 Bacterial extracellular solute-binding proteins, family 3 WM43_RS12630 PF00308 Bacterial dnaA protein WM43_RS12630 PF08299 Bacterial dnaA protein helix-turn-helix WM43_RS12630 PF11638 DnaA N-terminal domain WM43_RS12635 PF00712 DNA polymerase III beta subunit, N-terminal domain WM43_RS12635 PF02767 DNA polymerase III beta subunit, central domain WM43_RS12635 PF02768 DNA polymerase III beta subunit, C-terminal domain WM43_RS12640 PF02463 RecF/RecN/SMC N terminal domain WM43_RS12645 PF18053 DNA gyrase B subunit insert domain WM43_RS12645 PF00986 DNA gyrase B subunit, carboxyl terminus WM43_RS12645 PF00204 DNA gyrase B WM43_RS12645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS12645 PF01751 Toprim domain WM43_RS12655 PF13280 WYL domain WM43_RS12655 PF08279 HTH domain WM43_RS12660 PF01965 DJ-1/PfpI family WM43_RS12660 PF12833 Helix-turn-helix domain WM43_RS12665 PF12706 Beta-lactamase superfamily domain WM43_RS12670 PF00011 Hsp20/alpha crystallin family WM43_RS12675 PF00011 Hsp20/alpha crystallin family WM43_RS12680 PF00155 Aminotransferase class I and II WM43_RS12695 PF07690 Major Facilitator Superfamily WM43_RS12700 PF00486 Transcriptional regulatory protein, C terminal WM43_RS12700 PF00072 Response regulator receiver domain WM43_RS12705 PF13492 GAF domain WM43_RS12705 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS12705 PF02702 Osmosensitive K+ channel His kinase sensor domain WM43_RS12705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS12705 PF13493 Domain of unknown function (DUF4118) WM43_RS12710 PF02669 K+-transporting ATPase, c chain WM43_RS12720 PF03814 Potassium-transporting ATPase A subunit WM43_RS12725 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM43_RS12725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WM43_RS12730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS12730 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS12730 PF00497 Bacterial extracellular solute-binding proteins, family 3 WM43_RS12735 PF00873 AcrB/AcrD/AcrF family WM43_RS12740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM43_RS12745 PF00440 Bacterial regulatory proteins, tetR family WM43_RS12780 PF12146 Serine aminopeptidase, S33 WM43_RS12785 PF00132 Bacterial transferase hexapeptide (six repeats) WM43_RS12790 PF12105 SpoU, rRNA methylase, C-terminal WM43_RS12790 PF00588 SpoU rRNA Methylase family WM43_RS12795 PF13291 ACT domain WM43_RS12795 PF04607 Region found in RelA / SpoT proteins WM43_RS12795 PF02824 TGS domain WM43_RS12800 PF01192 RNA polymerase Rpb6 WM43_RS12805 PF00625 Guanylate kinase WM43_RS12815 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WM43_RS12830 PF00892 EamA-like transporter family WM43_RS12845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS12845 PF03466 LysR substrate binding domain WM43_RS12850 PF00579 tRNA synthetases class I (W and Y) WM43_RS12855 PF00582 Universal stress protein family WM43_RS12860 PF12241 Trans-2-enoyl-CoA reductase catalytic region WM43_RS12860 PF07055 Enoyl reductase FAD binding domain WM43_RS12860 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase WM43_RS12865 PF00210 Ferritin-like domain WM43_RS12875 PF07694 5TMR of 5TMR-LYT WM43_RS12875 PF06580 Histidine kinase WM43_RS12875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS12880 PF04397 LytTr DNA-binding domain WM43_RS12880 PF00072 Response regulator receiver domain WM43_RS12885 PF07690 Major Facilitator Superfamily WM43_RS12890 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain WM43_RS12890 PF02222 ATP-grasp domain WM43_RS12895 PF00731 AIR carboxylase WM43_RS12910 PF03466 LysR substrate binding domain WM43_RS12910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS12915 PF07715 TonB-dependent Receptor Plug Domain WM43_RS12915 PF00593 TonB dependent receptor WM43_RS12920 PF01177 Asp/Glu/Hydantoin racemase WM43_RS12955 PF00899 ThiF family WM43_RS12960 PF02657 Fe-S metabolism associated domain WM43_RS12965 PF00266 Aminotransferase class-V WM43_RS12970 PF00580 UvrD/REP helicase N-terminal domain WM43_RS12970 PF13361 UvrD-like helicase C-terminal domain WM43_RS12975 PF03707 Bacterial signalling protein N terminal repeat WM43_RS12975 PF00563 EAL domain WM43_RS12975 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS12980 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WM43_RS12985 PF08240 Alcohol dehydrogenase GroES-like domain WM43_RS12985 PF00107 Zinc-binding dehydrogenase WM43_RS12990 PF00155 Aminotransferase class I and II WM43_RS12995 PF08360 QacR-like protein, C-terminal region WM43_RS12995 PF00440 Bacterial regulatory proteins, tetR family WM43_RS13000 PF01370 NAD dependent epimerase/dehydratase family WM43_RS13005 PF13439 Glycosyltransferase Family 4 WM43_RS13045 PF14001 YdfZ protein WM43_RS13065 PF13361 UvrD-like helicase C-terminal domain WM43_RS13065 PF00580 UvrD/REP helicase N-terminal domain WM43_RS13070 PF02608 ABC transporter substrate-binding protein PnrA-like WM43_RS13075 PF00005 ABC transporter WM43_RS13080 PF02653 Branched-chain amino acid transport system / permease component WM43_RS13085 PF02653 Branched-chain amino acid transport system / permease component WM43_RS13090 PF00149 Calcineurin-like phosphoesterase WM43_RS13090 PF02872 5'-nucleotidase, C-terminal domain WM43_RS13100 PF00571 CBS domain WM43_RS13100 PF01769 Divalent cation transporter WM43_RS13100 PF03448 MgtE intracellular N domain WM43_RS13105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WM43_RS13105 PF14824 Sirohaem biosynthesis protein central WM43_RS13105 PF10414 Sirohaem synthase dimerisation region WM43_RS13110 PF01226 Formate/nitrite transporter WM43_RS13115 PF13806 Rieske-like [2Fe-2S] domain WM43_RS13120 PF18267 Rubredoxin NAD+ reductase C-terminal domain WM43_RS13120 PF04324 BFD-like [2Fe-2S] binding domain WM43_RS13120 PF01077 Nitrite and sulphite reductase 4Fe-4S domain WM43_RS13120 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain WM43_RS13120 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM43_RS13135 PF00005 ABC transporter WM43_RS13140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM43_RS13150 PF00004 ATPase family associated with various cellular activities (AAA) WM43_RS13150 PF07724 AAA domain (Cdc48 subfamily) WM43_RS13150 PF10431 C-terminal, D2-small domain, of ClpB protein WM43_RS13155 PF00227 Proteasome subunit WM43_RS13165 PF05746 DALR anticodon binding domain WM43_RS13165 PF03485 Arginyl tRNA synthetase N terminal domain WM43_RS13165 PF00750 tRNA synthetases class I (R) WM43_RS13175 PF04542 Sigma-70 region 2 WM43_RS13175 PF04545 Sigma-70, region 4 WM43_RS13185 PF02673 Bacitracin resistance protein BacA WM43_RS13190 PF01263 Aldose 1-epimerase WM43_RS13195 PF10509 Galactokinase galactose-binding signature WM43_RS13195 PF00288 GHMP kinases N terminal domain WM43_RS13195 PF08544 GHMP kinases C terminal WM43_RS13200 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain WM43_RS13200 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain WM43_RS13205 PF16363 GDP-mannose 4,6 dehydratase WM43_RS13210 PF00356 Bacterial regulatory proteins, lacI family WM43_RS13215 PF02836 Glycosyl hydrolases family 2, TIM barrel domain WM43_RS13215 PF00703 Glycosyl hydrolases family 2 WM43_RS13215 PF02837 Glycosyl hydrolases family 2, sugar binding domain WM43_RS13215 PF02929 Beta galactosidase small chain WM43_RS13215 PF16353 Domain of unknown function(DUF4981) WM43_RS13220 PF13407 Periplasmic binding protein domain WM43_RS13225 PF00005 ABC transporter WM43_RS13230 PF02653 Branched-chain amino acid transport system / permease component WM43_RS13235 PF02743 Cache domain WM43_RS13235 PF00672 HAMP domain WM43_RS13235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS13240 PF05958 tRNA (Uracil-5-)-methyltransferase WM43_RS13255 PF02903 Alpha amylase, N-terminal ig-like domain WM43_RS13255 PF00128 Alpha amylase, catalytic domain WM43_RS13270 PF00012 Hsp70 protein WM43_RS13275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WM43_RS13275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WM43_RS13280 PF05981 CreA protein WM43_RS13295 PF01258 Prokaryotic dksA/traR C4-type zinc finger WM43_RS13300 PF00120 Glutamine synthetase, catalytic domain WM43_RS13305 PF00202 Aminotransferase class-III WM43_RS13310 PF13416 Bacterial extracellular solute-binding protein WM43_RS13315 PF13416 Bacterial extracellular solute-binding protein WM43_RS13320 PF08402 TOBE domain WM43_RS13320 PF00005 ABC transporter WM43_RS13325 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS13330 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS13335 PF03475 3-alpha domain WM43_RS13335 PF03473 MOSC domain WM43_RS13350 PF03061 Thioesterase superfamily WM43_RS13355 PF00271 Helicase conserved C-terminal domain WM43_RS13355 PF09382 RQC domain WM43_RS13355 PF16124 RecQ zinc-binding WM43_RS13355 PF00570 HRDC domain WM43_RS13355 PF00270 DEAD/DEAH box helicase WM43_RS13360 PF00034 Cytochrome c WM43_RS13365 PF02696 Uncharacterized ACR, YdiU/UPF0061 family WM43_RS13375 PF02592 Putative vitamin uptake transporter WM43_RS13380 PF03737 Aldolase/RraA WM43_RS13385 PF00672 HAMP domain WM43_RS13385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS13395 PF01197 Ribosomal protein L31 WM43_RS13400 PF00270 DEAD/DEAH box helicase WM43_RS13400 PF18319 PriA DNA helicase Cys-rich region (CRR) domain WM43_RS13400 PF18074 Primosomal protein N C-terminal domain WM43_RS13400 PF17764 3′ DNA-binding domain (3′BD) WM43_RS13400 PF00271 Helicase conserved C-terminal domain WM43_RS13410 PF11066 Protein of unknown function (DUF2867) WM43_RS13410 PF13460 NAD(P)H-binding WM43_RS13415 PF03222 Tryptophan/tyrosine permease family WM43_RS13420 PF00390 Malic enzyme, N-terminal domain WM43_RS13420 PF03949 Malic enzyme, NAD binding domain WM43_RS13425 PF03631 Virulence factor BrkB WM43_RS13430 PF02580 D-Tyr-tRNA(Tyr) deacylase WM43_RS13435 PF17284 Spermidine synthase tetramerisation domain WM43_RS13440 PF09500 Putative thioesterase (yiiD_Cterm) WM43_RS13440 PF00583 Acetyltransferase (GNAT) family WM43_RS13450 PF00270 DEAD/DEAH box helicase WM43_RS13450 PF00271 Helicase conserved C-terminal domain WM43_RS13450 PF17191 RecG wedge domain WM43_RS13455 PF13091 PLD-like domain WM43_RS13460 PF02447 GntP family permease WM43_RS13465 PF01202 Shikimate kinase WM43_RS13470 PF00920 Dehydratase family WM43_RS13475 PF01081 KDPG and KHG aldolase WM43_RS13480 PF00356 Bacterial regulatory proteins, lacI family WM43_RS13480 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family WM43_RS13490 PF01551 Peptidase family M23 WM43_RS13495 PF06415 BPG-independent PGAM N-terminus (iPGM_N) WM43_RS13495 PF01676 Metalloenzyme superfamily WM43_RS13500 PF00581 Rhodanese-like domain WM43_RS13505 PF02556 Preprotein translocase subunit SecB WM43_RS13510 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus WM43_RS13510 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus WM43_RS13515 PF01106 NifU-like domain WM43_RS13515 PF01521 Iron-sulphur cluster biosynthesis WM43_RS13520 PF00156 Phosphoribosyl transferase domain WM43_RS13525 PF00561 alpha/beta hydrolase fold WM43_RS13545 PF16921 Tex protein YqgF-like domain WM43_RS13545 PF09371 Tex-like protein N-terminal domain WM43_RS13545 PF00575 S1 RNA binding domain WM43_RS13545 PF17674 HHH domain WM43_RS13550 PF03449 Transcription elongation factor, N-terminal WM43_RS13550 PF01272 Transcription elongation factor, GreA/GreB, C-term WM43_RS13555 PF00486 Transcriptional regulatory protein, C terminal WM43_RS13555 PF00072 Response regulator receiver domain WM43_RS13560 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS13560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS13560 PF00672 HAMP domain WM43_RS13570 PF00338 Ribosomal protein S10p/S20e WM43_RS13575 PF00297 Ribosomal protein L3 WM43_RS13580 PF00573 Ribosomal protein L4/L1 family WM43_RS13585 PF00276 Ribosomal protein L23 WM43_RS13590 PF03947 Ribosomal Proteins L2, C-terminal domain WM43_RS13590 PF00181 Ribosomal Proteins L2, RNA binding domain WM43_RS13595 PF00203 Ribosomal protein S19 WM43_RS13600 PF00237 Ribosomal protein L22p/L17e WM43_RS13605 PF07650 KH domain WM43_RS13605 PF00189 Ribosomal protein S3, C-terminal domain WM43_RS13610 PF00252 Ribosomal protein L16p/L10e WM43_RS13615 PF00831 Ribosomal L29 protein WM43_RS13620 PF00366 Ribosomal protein S17 WM43_RS13625 PF00238 Ribosomal protein L14p/L23e WM43_RS13630 PF00467 KOW motif WM43_RS13630 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 WM43_RS13635 PF00281 Ribosomal protein L5 WM43_RS13635 PF00673 ribosomal L5P family C-terminus WM43_RS13640 PF00253 Ribosomal protein S14p/S29e WM43_RS13645 PF00410 Ribosomal protein S8 WM43_RS13650 PF00347 Ribosomal protein L6 WM43_RS13655 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast WM43_RS13660 PF03719 Ribosomal protein S5, C-terminal domain WM43_RS13660 PF00333 Ribosomal protein S5, N-terminal domain WM43_RS13665 PF00327 Ribosomal protein L30p/L7e WM43_RS13670 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A WM43_RS13675 PF00344 SecY translocase WM43_RS13680 PF00416 Ribosomal protein S13/S18 WM43_RS13685 PF00411 Ribosomal protein S11 WM43_RS13690 PF01479 S4 domain WM43_RS13690 PF00163 Ribosomal protein S4/S9 N-terminal domain WM43_RS13695 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain WM43_RS13695 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain WM43_RS13695 PF01000 RNA polymerase Rpb3/RpoA insert domain WM43_RS13700 PF01196 Ribosomal protein L17 WM43_RS13730 PF00593 TonB dependent receptor WM43_RS13730 PF07715 TonB-dependent Receptor Plug Domain WM43_RS13735 PF17151 Periplasmic sensor domain WM43_RS13735 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS13740 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS13740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS13740 PF00672 HAMP domain WM43_RS13745 PF00072 Response regulator receiver domain WM43_RS13745 PF00486 Transcriptional regulatory protein, C terminal WM43_RS13760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS13760 PF03466 LysR substrate binding domain WM43_RS13770 PF02678 Pirin WM43_RS13770 PF17954 Quercetinase C-terminal cupin domain WM43_RS13775 PF07681 DoxX WM43_RS13780 PF17946 RecC C-terminal domain WM43_RS13785 PF00580 UvrD/REP helicase N-terminal domain WM43_RS13785 PF12705 PD-(D/E)XK nuclease superfamily WM43_RS13785 PF13361 UvrD-like helicase C-terminal domain WM43_RS13790 PF13538 UvrD-like helicase C-terminal domain WM43_RS13800 PF13808 DDE_Tnp_1-associated WM43_RS13800 PF01609 Transposase DDE domain WM43_RS13810 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS13825 PF07702 UTRA domain WM43_RS13825 PF00392 Bacterial regulatory proteins, gntR family WM43_RS13840 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS13850 PF08402 TOBE domain WM43_RS13850 PF00005 ABC transporter WM43_RS13860 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS13880 PF01053 Cys/Met metabolism PLP-dependent enzyme WM43_RS13885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WM43_RS13885 PF12793 Sugar transport-related sRNA regulator N-term WM43_RS13890 PF00141 Peroxidase WM43_RS13905 PF03280 Proteobacterial lipase chaperone protein WM43_RS13910 PF00561 alpha/beta hydrolase fold WM43_RS13915 PF00579 tRNA synthetases class I (W and Y) WM43_RS13915 PF01479 S4 domain WM43_RS13920 PF00196 Bacterial regulatory proteins, luxR family WM43_RS13940 PF00199 Catalase WM43_RS13940 PF06628 Catalase-related immune-responsive WM43_RS13965 PF10458 Valyl tRNA synthetase tRNA binding arm WM43_RS13965 PF08264 Anticodon-binding domain of tRNA WM43_RS13965 PF00133 tRNA synthetases class I (I, L, M and V) WM43_RS13970 PF04364 DNA polymerase III chi subunit, HolC WM43_RS13975 PF00883 Cytosol aminopeptidase family, catalytic domain WM43_RS13975 PF02789 Cytosol aminopeptidase family, N-terminal domain WM43_RS13980 PF03739 Lipopolysaccharide export system permease LptF/LptG WM43_RS13985 PF03739 Lipopolysaccharide export system permease LptF/LptG WM43_RS14000 PF14659 Phage integrase, N-terminal SAM-like domain WM43_RS14000 PF00589 Phage integrase family WM43_RS14005 PF01527 Transposase WM43_RS14010 PF00665 Integrase core domain WM43_RS14020 PF07715 TonB-dependent Receptor Plug Domain WM43_RS14020 PF00593 TonB dependent receptor WM43_RS14030 PF00768 D-alanyl-D-alanine carboxypeptidase WM43_RS14035 PF13520 Amino acid permease WM43_RS14055 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded WM43_RS14070 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase WM43_RS14075 PF02602 Uroporphyrinogen-III synthase HemD WM43_RS14080 PF03900 Porphobilinogen deaminase, C-terminal domain WM43_RS14080 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain WM43_RS14085 PF01295 Adenylate cyclase, class-I WM43_RS14085 PF12633 Adenylate cyclase NT domain WM43_RS14090 PF02230 Phospholipase/Carboxylesterase WM43_RS14095 PF01491 Frataxin-like domain WM43_RS14100 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain WM43_RS14100 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain WM43_RS14105 PF01678 Diaminopimelate epimerase WM43_RS14115 PF02899 Phage integrase, N-terminal SAM-like domain WM43_RS14115 PF00589 Phage integrase family WM43_RS14120 PF13419 Haloacid dehalogenase-like hydrolase WM43_RS14130 PF00027 Cyclic nucleotide-binding domain WM43_RS14130 PF13545 Crp-like helix-turn-helix domain WM43_RS14140 PF07722 Peptidase C26 WM43_RS14145 PF04751 Protein of unknown function (DUF615) WM43_RS14165 PF00075 RNase H WM43_RS14215 PF13276 HTH-like domain WM43_RS14215 PF00665 Integrase core domain WM43_RS14220 PF01527 Transposase WM43_RS14230 PF00239 Resolvase, N terminal domain WM43_RS14230 PF02796 Helix-turn-helix domain of resolvase WM43_RS14260 PF01523 Putative modulator of DNA gyrase WM43_RS14265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WM43_RS14270 PF01722 BolA-like protein WM43_RS14280 PF05494 MlaC protein WM43_RS14285 PF02470 MlaD protein WM43_RS14290 PF02405 Permease MlaE WM43_RS14295 PF00005 ABC transporter WM43_RS14300 PF01380 SIS domain WM43_RS14300 PF00571 CBS domain WM43_RS14310 PF06835 Lipopolysaccharide-assembly, LptC-related WM43_RS14315 PF03968 OstA-like protein WM43_RS14320 PF00005 ABC transporter WM43_RS14320 PF12399 Branched-chain amino acid ATP-binding cassette transporter WM43_RS14325 PF04552 Sigma-54, DNA binding domain WM43_RS14325 PF04963 Sigma-54 factor, core binding domain WM43_RS14325 PF00309 Sigma-54 factor, Activator interacting domain (AID) WM43_RS14330 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein WM43_RS14335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 WM43_RS14340 PF03668 P-loop ATPase protein family WM43_RS14345 PF00381 PTS HPr component phosphorylation site WM43_RS14350 PF05043 Mga helix-turn-helix domain WM43_RS14350 PF00874 PRD domain WM43_RS14350 PF08279 HTH domain WM43_RS14350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 WM43_RS14355 PF07071 KDGP aldolase WM43_RS14360 PF03841 L-seryl-tRNA selenium transferase WM43_RS14365 PF01979 Amidohydrolase family WM43_RS14395 PF13180 PDZ domain WM43_RS14400 PF13180 PDZ domain WM43_RS14400 PF00595 PDZ domain WM43_RS14410 PF03969 AFG1-like ATPase WM43_RS14415 PF00572 Ribosomal protein L13 WM43_RS14420 PF00380 Ribosomal protein S9/S16 WM43_RS14425 PF00355 Rieske [2Fe-2S] domain WM43_RS14425 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal WM43_RS14430 PF00032 Cytochrome b(C-terminal)/b6/petD WM43_RS14430 PF00033 Cytochrome b/b6/petB WM43_RS14435 PF02167 Cytochrome C1 family WM43_RS14440 PF00043 Glutathione S-transferase, C-terminal domain WM43_RS14440 PF02798 Glutathione S-transferase, N-terminal domain WM43_RS14445 PF04386 Stringent starvation protein B WM43_RS14450 PF04972 BON domain WM43_RS14455 PF13580 SIS domain WM43_RS14460 PF02021 Uncharacterised protein family UPF0102 WM43_RS14465 PF04348 LppC putative lipoprotein WM43_RS14470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WM43_RS14480 PF02381 MraZ protein, putative antitoxin-like WM43_RS14485 PF01795 MraW methylase family WM43_RS14490 PF04999 Cell division protein FtsL WM43_RS14495 PF03717 Penicillin-binding Protein dimerisation domain WM43_RS14495 PF00905 Penicillin binding protein transpeptidase domain WM43_RS14500 PF01225 Mur ligase family, catalytic domain WM43_RS14500 PF02875 Mur ligase family, glutamate ligase domain WM43_RS14500 PF08245 Mur ligase middle domain WM43_RS14505 PF01225 Mur ligase family, catalytic domain WM43_RS14505 PF02875 Mur ligase family, glutamate ligase domain WM43_RS14505 PF08245 Mur ligase middle domain WM43_RS14510 PF00953 Glycosyl transferase family 4 WM43_RS14510 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 WM43_RS14515 PF02875 Mur ligase family, glutamate ligase domain WM43_RS14515 PF08245 Mur ligase middle domain WM43_RS14520 PF01098 Cell cycle protein WM43_RS14525 PF03033 Glycosyltransferase family 28 N-terminal domain WM43_RS14525 PF04101 Glycosyltransferase family 28 C-terminal domain WM43_RS14530 PF02875 Mur ligase family, glutamate ligase domain WM43_RS14530 PF08245 Mur ligase middle domain WM43_RS14530 PF01225 Mur ligase family, catalytic domain WM43_RS14535 PF03799 Cell division protein FtsQ WM43_RS14535 PF08478 POTRA domain, FtsQ-type WM43_RS14540 PF02491 SHS2 domain inserted in FTSA WM43_RS14545 PF00091 Tubulin/FtsZ family, GTPase domain WM43_RS14545 PF12327 FtsZ family, C-terminal domain WM43_RS14550 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase WM43_RS14560 PF02810 SEC-C motif WM43_RS14560 PF07517 SecA DEAD-like domain WM43_RS14560 PF01043 SecA preprotein cross-linking domain WM43_RS14560 PF07516 SecA Wing and Scaffold domain WM43_RS14565 PF00293 NUDIX domain WM43_RS14570 PF03884 DNA gyrase inhibitor YacG WM43_RS14575 PF07072 Cell division protein WM43_RS14580 PF01121 Dephospho-CoA kinase WM43_RS14585 PF01478 Type IV leader peptidase family WM43_RS14585 PF06750 Bacterial Peptidase A24 N-terminal domain WM43_RS14590 PF00482 Type II secretion system (T2SS), protein F WM43_RS14595 PF00437 Type II/IV secretion system protein WM43_RS14595 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain WM43_RS14600 PF07963 Prokaryotic N-terminal methylation motif WM43_RS14605 PF01609 Transposase DDE domain WM43_RS14605 PF13808 DDE_Tnp_1-associated WM43_RS14610 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain WM43_RS14610 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain WM43_RS14620 PF01510 N-acetylmuramoyl-L-alanine amidase WM43_RS14625 PF07729 FCD domain WM43_RS14625 PF00392 Bacterial regulatory proteins, gntR family WM43_RS14630 PF00456 Transketolase, thiamine diphosphate binding domain WM43_RS14630 PF17831 Pyruvate dehydrogenase E1 component middle domain WM43_RS14635 PF00364 Biotin-requiring enzyme WM43_RS14635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WM43_RS14635 PF02817 e3 binding domain WM43_RS14640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WM43_RS14640 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM43_RS14645 PF03707 Bacterial signalling protein N terminal repeat WM43_RS14645 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS14645 PF00563 EAL domain WM43_RS14650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS14650 PF00672 HAMP domain WM43_RS14650 PF12729 Four helix bundle sensory module for signal transduction WM43_RS14655 PF01734 Patatin-like phospholipase WM43_RS14660 PF00330 Aconitase family (aconitate hydratase) WM43_RS14660 PF06434 Aconitate hydratase 2 N-terminus WM43_RS14660 PF11791 Aconitate B N-terminal domain WM43_RS14665 PF00563 EAL domain WM43_RS14665 PF12792 CSS motif domain associated with EAL WM43_RS14675 PF02492 CobW/HypB/UreG, nucleotide-binding domain WM43_RS14675 PF07683 Cobalamin synthesis protein cobW C-terminal domain WM43_RS14680 PF00873 AcrB/AcrD/AcrF family WM43_RS14695 PF07690 Major Facilitator Superfamily WM43_RS14705 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) WM43_RS14710 PF02152 Dihydroneopterin aldolase WM43_RS14715 PF02660 Glycerol-3-phosphate acyltransferase WM43_RS14740 PF07670 Nucleoside recognition WM43_RS14750 PF01609 Transposase DDE domain WM43_RS14750 PF05598 Transposase domain (DUF772) WM43_RS14765 PF14698 Argininosuccinate lyase C-terminal WM43_RS14765 PF00206 Lyase WM43_RS14770 PF00764 Arginosuccinate synthase WM43_RS14775 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WM43_RS14775 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WM43_RS14780 PF00696 Amino acid kinase family WM43_RS14785 PF01118 Semialdehyde dehydrogenase, NAD binding domain WM43_RS14785 PF02774 Semialdehyde dehydrogenase, dimerisation domain WM43_RS14790 PF07687 Peptidase dimerisation domain WM43_RS14790 PF01546 Peptidase family M20/M25/M40 WM43_RS14795 PF00311 Phosphoenolpyruvate carboxylase WM43_RS14800 PF00132 Bacterial transferase hexapeptide (six repeats) WM43_RS14810 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS14820 PF06055 Exopolysaccharide synthesis, ExoD WM43_RS14830 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS14835 PF00909 Ammonium Transporter Family WM43_RS14840 PF05433 Glycine zipper 2TM domain WM43_RS14845 PF00583 Acetyltransferase (GNAT) family WM43_RS14850 PF11756 Nitrous oxide-stimulated promoter WM43_RS14855 PF01321 Creatinase/Prolidase N-terminal domain WM43_RS14855 PF00557 Metallopeptidase family M24 WM43_RS14860 PF00392 Bacterial regulatory proteins, gntR family WM43_RS14865 PF01293 Phosphoenolpyruvate carboxykinase WM43_RS14870 PF01430 Hsp33 protein WM43_RS14875 PF01479 S4 domain WM43_RS14885 PF01569 PAP2 superfamily WM43_RS14890 PF01594 AI-2E family transporter WM43_RS14910 PF02954 Bacterial regulatory protein, Fis family WM43_RS14910 PF00989 PAS fold WM43_RS14910 PF00158 Sigma-54 interaction domain WM43_RS14915 PF00465 Iron-containing alcohol dehydrogenase WM43_RS14920 PF03610 PTS system fructose IIA component WM43_RS14920 PF05524 PEP-utilising enzyme, N-terminal WM43_RS14920 PF00391 PEP-utilising enzyme, mobile domain WM43_RS14920 PF00381 PTS HPr component phosphorylation site WM43_RS14925 PF02734 DAK2 domain WM43_RS14930 PF02733 Dak1 domain WM43_RS14935 PF00860 Permease family WM43_RS14940 PF00313 'Cold-shock' DNA-binding domain WM43_RS14950 PF01545 Cation efflux family WM43_RS14950 PF16916 Dimerisation domain of Zinc Transporter WM43_RS14960 PF05598 Transposase domain (DUF772) WM43_RS14960 PF01609 Transposase DDE domain WM43_RS14970 PF01695 IstB-like ATP binding protein WM43_RS14975 PF00665 Integrase core domain WM43_RS14980 PF04851 Type III restriction enzyme, res subunit WM43_RS14985 PF01609 Transposase DDE domain WM43_RS14985 PF13808 DDE_Tnp_1-associated WM43_RS15010 PF13276 HTH-like domain WM43_RS15010 PF00665 Integrase core domain WM43_RS15015 PF01527 Transposase WM43_RS15025 PF02899 Phage integrase, N-terminal SAM-like domain WM43_RS15025 PF00589 Phage integrase family WM43_RS15030 PF00817 impB/mucB/samB family WM43_RS15030 PF11799 impB/mucB/samB family C-terminal domain WM43_RS15030 PF13438 Domain of unknown function (DUF4113) WM43_RS15035 PF13358 DDE superfamily endonuclease WM43_RS15035 PF13592 Winged helix-turn helix WM43_RS15040 PF01381 Helix-turn-helix WM43_RS15050 PF13333 Integrase core domain WM43_RS15050 PF13276 HTH-like domain WM43_RS15050 PF00665 Integrase core domain WM43_RS15060 PF02909 Tetracyclin repressor-like, C-terminal domain WM43_RS15060 PF00440 Bacterial regulatory proteins, tetR family WM43_RS15065 PF07690 Major Facilitator Superfamily WM43_RS15075 PF13538 UvrD-like helicase C-terminal domain WM43_RS15075 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain WM43_RS15075 PF14490 Helix-hairpin-helix containing domain WM43_RS15100 PF00436 Single-strand binding protein family WM43_RS15105 PF00196 Bacterial regulatory proteins, luxR family WM43_RS15110 PF10627 Curli assembly protein CsgE WM43_RS15120 PF03783 Curli production assembly/transport component CsgG WM43_RS15125 PF13006 Insertion element 4 transposase N-terminal WM43_RS15125 PF01609 Transposase DDE domain WM43_RS15145 PF00005 ABC transporter WM43_RS15145 PF17760 UvrA interaction domain WM43_RS15145 PF17755 UvrA DNA-binding domain WM43_RS15150 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS15155 PF03922 OmpW family WM43_RS15160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS15160 PF00672 HAMP domain WM43_RS15170 PF01609 Transposase DDE domain WM43_RS15170 PF13006 Insertion element 4 transposase N-terminal WM43_RS15180 PF02219 Methylenetetrahydrofolate reductase WM43_RS15190 PF03594 Benzoate membrane transport protein WM43_RS15195 PF01381 Helix-turn-helix WM43_RS15195 PF07883 Cupin domain WM43_RS15235 PF04363 Protein of unknown function (DUF496) WM43_RS15255 PF02464 Competence-damaged protein WM43_RS15255 PF00994 Probable molybdopterin binding domain WM43_RS15265 PF04204 Homoserine O-succinyltransferase WM43_RS15275 PF01037 Lrp/AsnC ligand binding domain WM43_RS15280 PF00884 Sulfatase WM43_RS15295 PF16657 Maltogenic Amylase, C-terminal domain WM43_RS15295 PF02903 Alpha amylase, N-terminal ig-like domain WM43_RS15295 PF00128 Alpha amylase, catalytic domain WM43_RS15315 PF00106 short chain dehydrogenase WM43_RS15320 PF03577 Peptidase family C69 WM43_RS15330 PF00465 Iron-containing alcohol dehydrogenase WM43_RS15335 PF02142 MGS-like domain WM43_RS15345 PF00210 Ferritin-like domain WM43_RS15360 PF17176 tRNA-binding domain WM43_RS15360 PF13718 GNAT acetyltransferase 2 WM43_RS15360 PF08351 Domain of unknown function (DUF1726) WM43_RS15360 PF05127 Helicase WM43_RS15365 PF00106 short chain dehydrogenase WM43_RS15370 PF01584 CheW-like domain WM43_RS15370 PF00072 Response regulator receiver domain WM43_RS15380 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WM43_RS15380 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WM43_RS15385 PF02698 DUF218 domain WM43_RS15390 PF08453 Peptidase family M9 N-terminal WM43_RS15390 PF01752 Collagenase WM43_RS15395 PF00665 Integrase core domain WM43_RS15395 PF13276 HTH-like domain WM43_RS15400 PF01527 Transposase WM43_RS15405 PF05598 Transposase domain (DUF772) WM43_RS15405 PF01609 Transposase DDE domain WM43_RS15415 PF00501 AMP-binding enzyme WM43_RS15420 PF13378 Enolase C-terminal domain-like WM43_RS15425 PF00378 Enoyl-CoA hydratase/isomerase WM43_RS15430 PF12697 Alpha/beta hydrolase family WM43_RS15435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WM43_RS15435 PF16582 Middle domain of thiamine pyrophosphate WM43_RS15435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WM43_RS15440 PF00425 chorismate binding enzyme WM43_RS15445 PF01040 UbiA prenyltransferase family WM43_RS15465 PF00270 DEAD/DEAH box helicase WM43_RS15465 PF03880 DbpA RNA binding domain WM43_RS15465 PF00271 Helicase conserved C-terminal domain WM43_RS15470 PF07670 Nucleoside recognition WM43_RS15470 PF07662 Na+ dependent nucleoside transporter C-terminus WM43_RS15470 PF01773 Na+ dependent nucleoside transporter N-terminus WM43_RS15475 PF04307 LexA-binding, inner membrane-associated putative hydrolase WM43_RS15480 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 WM43_RS15485 PF01544 CorA-like Mg2+ transporter protein WM43_RS15500 PF00684 DnaJ central domain WM43_RS15500 PF01556 DnaJ C terminal domain WM43_RS15500 PF00226 DnaJ domain WM43_RS15505 PF02080 TrkA-C domain WM43_RS15505 PF00999 Sodium/hydrogen exchanger family WM43_RS15505 PF03471 Transporter associated domain WM43_RS15510 PF05068 Mannitol repressor WM43_RS15515 PF01232 Mannitol dehydrogenase Rossmann domain WM43_RS15515 PF08125 Mannitol dehydrogenase C-terminal domain WM43_RS15520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit WM43_RS15520 PF02378 Phosphotransferase system, EIIC WM43_RS15520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 WM43_RS15525 PF03279 Bacterial lipid A biosynthesis acyltransferase WM43_RS15530 PF00294 pfkB family carbohydrate kinase WM43_RS15530 PF01467 Cytidylyltransferase-like WM43_RS15535 PF02321 Outer membrane efflux protein WM43_RS15540 PF00293 NUDIX domain WM43_RS15545 PF06853 Protein of unknown function (DUF1249) WM43_RS15550 PF00149 Calcineurin-like phosphoesterase WM43_RS15555 PF05728 Uncharacterised protein family (UPF0227) WM43_RS15560 PF00293 NUDIX domain WM43_RS15565 PF07869 Protein of unknown function (DUF1656) WM43_RS15570 PF00529 HlyD membrane-fusion protein of T1SS WM43_RS15570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM43_RS15575 PF04632 Fusaric acid resistance protein family WM43_RS15580 PF01751 Toprim domain WM43_RS15580 PF00204 DNA gyrase B WM43_RS15580 PF00986 DNA gyrase B subunit, carboxyl terminus WM43_RS15580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS15585 PF03989 DNA gyrase C-terminal domain, beta-propeller WM43_RS15585 PF00521 DNA gyrase/topoisomerase IV, subunit A WM43_RS15605 PF03466 LysR substrate binding domain WM43_RS15605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS15615 PF00854 POT family WM43_RS15635 PF00226 DnaJ domain WM43_RS15635 PF00684 DnaJ central domain WM43_RS15635 PF01556 DnaJ C terminal domain WM43_RS15650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS15650 PF03466 LysR substrate binding domain WM43_RS15655 PF00578 AhpC/TSA family WM43_RS15675 PF01553 Acyltransferase WM43_RS15680 PF04012 PspA/IM30 family WM43_RS15695 PF01541 GIY-YIG catalytic domain WM43_RS15705 PF00892 EamA-like transporter family WM43_RS15710 PF03167 Uracil DNA glycosylase superfamily WM43_RS15715 PF00892 EamA-like transporter family WM43_RS15720 PF03466 LysR substrate binding domain WM43_RS15720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS15725 PF00950 ABC 3 transport family WM43_RS15730 PF00005 ABC transporter WM43_RS15735 PF01297 Zinc-uptake complex component A periplasmic WM43_RS15755 PF01476 LysM domain WM43_RS15755 PF08525 Opacity-associated protein A N-terminal motif WM43_RS15755 PF01551 Peptidase family M23 WM43_RS15760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WM43_RS15765 PF04222 Protein of unknown function (DUF416) WM43_RS15780 PF02028 BCCT, betaine/carnitine/choline family transporter WM43_RS15785 PF12627 Probable RNA and SrmB- binding site of polymerase A WM43_RS15785 PF01743 Poly A polymerase head domain WM43_RS15785 PF01966 HD domain WM43_RS15790 PF10576 Iron-sulfur binding domain of endonuclease III WM43_RS15790 PF00633 Helix-hairpin-helix motif WM43_RS15790 PF00730 HhH-GPD superfamily base excision DNA repair protein WM43_RS15790 PF14815 NUDIX domain WM43_RS15795 PF04362 Bacterial Fe(2+) trafficking WM43_RS15800 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain WM43_RS15800 PF01464 Transglycosylase SLT domain WM43_RS15805 PF04076 Bacterial OB fold (BOF) protein WM43_RS15810 PF00657 GDSL-like Lipase/Acylhydrolase WM43_RS15815 PF01389 OmpA-like transmembrane domain WM43_RS15815 PF00691 OmpA family WM43_RS15820 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS15825 PF17876 Cold shock domain WM43_RS15825 PF00575 S1 RNA binding domain WM43_RS15825 PF00773 RNB domain WM43_RS15825 PF08206 Ribonuclease B OB domain WM43_RS15825 PF08461 Ribonuclease R winged-helix domain WM43_RS15830 PF00588 SpoU rRNA Methylase family WM43_RS15830 PF08032 RNA 2'-O ribose methyltransferase substrate binding WM43_RS15840 PF13673 Acetyltransferase (GNAT) domain WM43_RS15845 PF00270 DEAD/DEAH box helicase WM43_RS15845 PF00271 Helicase conserved C-terminal domain WM43_RS15850 PF05175 Methyltransferase small domain WM43_RS15855 PF05525 Branched-chain amino acid transport protein WM43_RS15860 PF05525 Branched-chain amino acid transport protein WM43_RS15880 PF01207 Dihydrouridine synthase (Dus) WM43_RS15885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS15885 PF08447 PAS fold WM43_RS15895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WM43_RS15905 PF00132 Bacterial transferase hexapeptide (six repeats) WM43_RS15910 PF10952 Protein of unknown function (DUF2753) WM43_RS15915 PF00378 Enoyl-CoA hydratase/isomerase WM43_RS15930 PF00106 short chain dehydrogenase WM43_RS15935 PF03129 Anticodon binding domain WM43_RS15935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WM43_RS15935 PF04073 Aminoacyl-tRNA editing domain WM43_RS15940 PF05958 tRNA (Uracil-5-)-methyltransferase WM43_RS15940 PF01938 TRAM domain WM43_RS15950 PF02470 MlaD protein WM43_RS15955 PF04403 Paraquat-inducible protein A WM43_RS15960 PF17209 Hfq protein WM43_RS15965 PF13419 Haloacid dehalogenase-like hydrolase WM43_RS15975 PF01590 GAF domain WM43_RS15975 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS15975 PF00563 EAL domain WM43_RS15975 PF00360 Phytochrome region WM43_RS15980 PF17876 Cold shock domain WM43_RS15980 PF08206 Ribonuclease B OB domain WM43_RS15980 PF00773 RNB domain WM43_RS15985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS15985 PF03466 LysR substrate binding domain WM43_RS15990 PF00765 Autoinducer synthase WM43_RS15995 PF03472 Autoinducer binding domain WM43_RS15995 PF00196 Bacterial regulatory proteins, luxR family WM43_RS16000 PF01810 LysE type translocator WM43_RS16005 PF00672 HAMP domain WM43_RS16005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS16010 PF07499 RuvA, C-terminal domain WM43_RS16010 PF01330 RuvA N terminal domain WM43_RS16015 PF17864 RuvB AAA lid domain WM43_RS16015 PF05496 Holliday junction DNA helicase RuvB P-loop domain WM43_RS16015 PF05491 RuvB C-terminal winged helix domain WM43_RS16020 PF01654 Cytochrome bd terminal oxidase subunit I WM43_RS16025 PF02322 Cytochrome bd terminal oxidase subunit II WM43_RS16030 PF08173 Membrane bound YbgT-like protein WM43_RS16040 PF03061 Thioesterase superfamily WM43_RS16045 PF01618 MotA/TolQ/ExbB proton channel family WM43_RS16050 PF02472 Biopolymer transport protein ExbD/TolR WM43_RS16060 PF04052 TolB amino-terminal domain WM43_RS16060 PF07676 WD40-like Beta Propeller Repeat WM43_RS16065 PF00691 OmpA family WM43_RS16070 PF13174 Tetratricopeptide repeat WM43_RS16070 PF16331 TolA binding protein trimerisation WM43_RS16135 PF00209 Sodium:neurotransmitter symporter family WM43_RS16145 PF00209 Sodium:neurotransmitter symporter family WM43_RS16165 PF07690 Major Facilitator Superfamily WM43_RS16175 PF01037 Lrp/AsnC ligand binding domain WM43_RS16190 PF00293 NUDIX domain WM43_RS16190 PF13344 Haloacid dehalogenase-like hydrolase WM43_RS16200 PF01641 SelR domain WM43_RS16205 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) WM43_RS16205 PF00128 Alpha amylase, catalytic domain WM43_RS16210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) WM43_RS16210 PF02806 Alpha amylase, C-terminal all-beta domain WM43_RS16210 PF00128 Alpha amylase, catalytic domain WM43_RS16215 PF02446 4-alpha-glucanotransferase WM43_RS16220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WM43_RS16220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WM43_RS16225 PF01263 Aldose 1-epimerase WM43_RS16230 PF02445 Quinolinate synthetase A protein WM43_RS16235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS16235 PF00672 HAMP domain WM43_RS16240 PF01957 NfeD-like C-terminal, partner-binding WM43_RS16245 PF16200 C-terminal region of band_7 WM43_RS16245 PF01145 SPFH domain / Band 7 family WM43_RS16250 PF14824 Sirohaem biosynthesis protein central WM43_RS16250 PF10414 Sirohaem synthase dimerisation region WM43_RS16250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WM43_RS16255 PF01507 Phosphoadenosine phosphosulfate reductase family WM43_RS16260 PF00009 Elongation factor Tu GTP binding domain WM43_RS16265 PF03600 Citrate transporter WM43_RS16265 PF02080 TrkA-C domain WM43_RS16295 PF08447 PAS fold WM43_RS16295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS16315 PF00005 ABC transporter WM43_RS16330 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) WM43_RS16345 PF00719 Inorganic pyrophosphatase WM43_RS16350 PF11849 Domain of unknown function (DUF3369) WM43_RS16360 PF00893 Small Multidrug Resistance protein WM43_RS16365 PF00893 Small Multidrug Resistance protein WM43_RS16370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WM43_RS16375 PF00905 Penicillin binding protein transpeptidase domain WM43_RS16375 PF00912 Transglycosylase WM43_RS16375 PF14814 Bifunctional transglycosylase second domain WM43_RS16380 PF08482 ATP-dependent helicase C-terminal WM43_RS16380 PF00270 DEAD/DEAH box helicase WM43_RS16380 PF04408 Helicase associated domain (HA2) WM43_RS16380 PF00271 Helicase conserved C-terminal domain WM43_RS16390 PF17746 SfsA N-terminal OB domain WM43_RS16390 PF03749 Sugar fermentation stimulation protein RE domain WM43_RS16395 PF01258 Prokaryotic dksA/traR C4-type zinc finger WM43_RS16400 PF00749 tRNA synthetases class I (E and Q), catalytic domain WM43_RS16405 PF01743 Poly A polymerase head domain WM43_RS16405 PF12626 Polymerase A arginine-rich C-terminus WM43_RS16405 PF12627 Probable RNA and SrmB- binding site of polymerase A WM43_RS16410 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) WM43_RS16415 PF02548 Ketopantoate hydroxymethyltransferase WM43_RS16420 PF02569 Pantoate-beta-alanine ligase WM43_RS16430 PF00375 Sodium:dicarboxylate symporter family WM43_RS16450 PF01869 BadF/BadG/BcrA/BcrD ATPase family WM43_RS16455 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component WM43_RS16460 PF01061 ABC-2 type transporter WM43_RS16465 PF00005 ABC transporter WM43_RS16470 PF00156 Phosphoribosyl transferase domain WM43_RS16475 PF00440 Bacterial regulatory proteins, tetR family WM43_RS16480 PF02441 Flavoprotein WM43_RS16485 PF01225 Mur ligase family, catalytic domain WM43_RS16485 PF08245 Mur ligase middle domain WM43_RS16485 PF02875 Mur ligase family, glutamate ligase domain WM43_RS16490 PF01569 PAP2 superfamily WM43_RS16495 PF01370 NAD dependent epimerase/dehydratase family WM43_RS16500 PF00175 Oxidoreductase NAD-binding domain WM43_RS16500 PF00111 2Fe-2S iron-sulfur cluster binding domain WM43_RS16500 PF00970 Oxidoreductase FAD-binding domain WM43_RS16505 PF03063 Prismane/CO dehydrogenase family WM43_RS16510 PF00210 Ferritin-like domain WM43_RS16515 PF01510 N-acetylmuramoyl-L-alanine amidase WM43_RS16520 PF07308 Protein of unknown function (DUF1456) WM43_RS16525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) WM43_RS16525 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS16525 PF01627 Hpt domain WM43_RS16525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS16525 PF00672 HAMP domain WM43_RS16525 PF00072 Response regulator receiver domain WM43_RS16530 PF01938 TRAM domain WM43_RS16530 PF05958 tRNA (Uracil-5-)-methyltransferase WM43_RS16535 PF13291 ACT domain WM43_RS16535 PF02824 TGS domain WM43_RS16535 PF04607 Region found in RelA / SpoT proteins WM43_RS16540 PF03819 MazG nucleotide pyrophosphohydrolase domain WM43_RS16545 PF00117 Glutamine amidotransferase class-I WM43_RS16545 PF06418 CTP synthase N-terminus WM43_RS16550 PF03952 Enolase, N-terminal domain WM43_RS16550 PF00113 Enolase, C-terminal TIM barrel domain WM43_RS16555 PF00561 alpha/beta hydrolase fold WM43_RS16565 PF01609 Transposase DDE domain WM43_RS16565 PF05598 Transposase domain (DUF772) WM43_RS16575 PF05598 Transposase domain (DUF772) WM43_RS16575 PF01609 Transposase DDE domain WM43_RS16600 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ WM43_RS16610 PF12848 ABC transporter WM43_RS16610 PF00005 ABC transporter WM43_RS16630 PF00392 Bacterial regulatory proteins, gntR family WM43_RS16630 PF00155 Aminotransferase class I and II WM43_RS16640 PF01810 LysE type translocator WM43_RS16645 PF01177 Asp/Glu/Hydantoin racemase WM43_RS16655 PF04074 YhcH/YjgK/YiaL WM43_RS16660 PF00871 Acetokinase family WM43_RS16665 PF00924 Mechanosensitive ion channel WM43_RS16670 PF03734 L,D-transpeptidase catalytic domain WM43_RS16670 PF17969 L,D-transpeptidase C-terminal domain WM43_RS16680 PF00474 Sodium:solute symporter family WM43_RS16685 PF04977 Septum formation initiator WM43_RS16690 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase WM43_RS16695 PF02542 YgbB family WM43_RS16700 PF01142 tRNA pseudouridine synthase D (TruD) WM43_RS16705 PF01975 Survival protein SurE WM43_RS16715 PF09335 SNARE associated Golgi protein WM43_RS16720 PF01476 LysM domain WM43_RS16720 PF01551 Peptidase family M23 WM43_RS16725 PF04542 Sigma-70 region 2 WM43_RS16725 PF04539 Sigma-70 region 3 WM43_RS16725 PF04545 Sigma-70, region 4 WM43_RS16725 PF00140 Sigma-70 factor, region 1.2 WM43_RS16730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WM43_RS16745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS16745 PF03466 LysR substrate binding domain WM43_RS16750 PF04371 Porphyromonas-type peptidyl-arginine deiminase WM43_RS16755 PF01425 Amidase WM43_RS16765 PF00753 Metallo-beta-lactamase superfamily WM43_RS16775 PF00270 DEAD/DEAH box helicase WM43_RS16775 PF00271 Helicase conserved C-terminal domain WM43_RS16780 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS16790 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase WM43_RS16795 PF00034 Cytochrome c WM43_RS16795 PF03150 Di-haem cytochrome c peroxidase WM43_RS16805 PF00445 Ribonuclease T2 family WM43_RS16815 PF03060 Nitronate monooxygenase WM43_RS16840 PF09297 NADH pyrophosphatase zinc ribbon domain WM43_RS16840 PF00293 NUDIX domain WM43_RS16840 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain WM43_RS16855 PF00486 Transcriptional regulatory protein, C terminal WM43_RS16855 PF00072 Response regulator receiver domain WM43_RS16875 PF08335 GlnD PII-uridylyltransferase WM43_RS16875 PF03710 Glutamate-ammonia ligase adenylyltransferase WM43_RS16885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS16885 PF00672 HAMP domain WM43_RS16890 PF00027 Cyclic nucleotide-binding domain WM43_RS16890 PF00520 Ion transport protein WM43_RS16895 PF08239 Bacterial SH3 domain WM43_RS16900 PF14850 DNA-binding domain of Proline dehydrogenase WM43_RS16900 PF01619 Proline dehydrogenase WM43_RS16900 PF18327 Proline utilization A proline dehydrogenase N-terminal domain WM43_RS16900 PF00171 Aldehyde dehydrogenase family WM43_RS16910 PF00293 NUDIX domain WM43_RS16910 PF09297 NADH pyrophosphatase zinc ribbon domain WM43_RS16915 PF01208 Uroporphyrinogen decarboxylase (URO-D) WM43_RS16920 PF00480 ROK family WM43_RS16925 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WM43_RS16925 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WM43_RS16930 PF00162 Phosphoglycerate kinase WM43_RS16935 PF01116 Fructose-bisphosphate aldolase class-II WM43_RS16940 PF01266 FAD dependent oxidoreductase WM43_RS16955 PF02683 Cytochrome C biogenesis protein transmembrane region WM43_RS16955 PF11412 Disulphide bond corrector protein DsbC WM43_RS16960 PF03091 CutA1 divalent ion tolerance protein WM43_RS16975 PF03466 LysR substrate binding domain WM43_RS16975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS16980 PF01571 Aminomethyltransferase folate-binding domain WM43_RS16985 PF03937 Flavinator of succinate dehydrogenase WM43_RS16995 PF02910 Fumarate reductase flavoprotein C-term WM43_RS16995 PF00890 FAD binding domain WM43_RS17000 PF08281 Sigma-70, region 4 WM43_RS17000 PF04542 Sigma-70 region 2 WM43_RS17005 PF03872 Anti sigma-E protein RseA, N-terminal domain WM43_RS17005 PF03873 Anti sigma-E protein RseA, C-terminal domain WM43_RS17010 PF03888 MucB/RseB N-terminal domain WM43_RS17010 PF17188 MucB/RseB C-terminal domain WM43_RS17020 PF06421 GTP-binding protein LepA C-terminus WM43_RS17020 PF03144 Elongation factor Tu domain 2 WM43_RS17020 PF00679 Elongation factor G C-terminus WM43_RS17020 PF00009 Elongation factor Tu GTP binding domain WM43_RS17025 PF10502 Signal peptidase, peptidase S26 WM43_RS17030 PF00035 Double-stranded RNA binding motif WM43_RS17030 PF14622 Ribonuclease-III-like WM43_RS17035 PF07650 KH domain WM43_RS17035 PF01926 50S ribosome-binding GTPase WM43_RS17040 PF02565 Recombination protein O C terminal WM43_RS17040 PF11967 Recombination protein O N terminal WM43_RS17045 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ WM43_RS17050 PF00459 Inositol monophosphatase family WM43_RS17055 PF03795 YCII-related domain WM43_RS17060 PF04279 Intracellular septation protein A WM43_RS17065 PF00282 Pyridoxal-dependent decarboxylase conserved domain WM43_RS17070 PF03006 Haemolysin-III related WM43_RS17075 PF02080 TrkA-C domain WM43_RS17075 PF06826 Predicted Permease Membrane Region WM43_RS17090 PF00563 EAL domain WM43_RS17090 PF03707 Bacterial signalling protein N terminal repeat WM43_RS17090 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS17095 PF06877 Regulator of ribonuclease activity B WM43_RS17115 PF00561 alpha/beta hydrolase fold WM43_RS17120 PF00034 Cytochrome c WM43_RS17120 PF03150 Di-haem cytochrome c peroxidase WM43_RS17125 PF00194 Eukaryotic-type carbonic anhydrase WM43_RS17130 PF04227 Indigoidine synthase A like protein WM43_RS17135 PF00294 pfkB family carbohydrate kinase WM43_RS17150 PF00582 Universal stress protein family WM43_RS17160 PF00267 Gram-negative porin WM43_RS17165 PF13276 HTH-like domain WM43_RS17165 PF00665 Integrase core domain WM43_RS17170 PF01527 Transposase WM43_RS17175 PF08241 Methyltransferase domain WM43_RS17180 PF00027 Cyclic nucleotide-binding domain WM43_RS17180 PF13545 Crp-like helix-turn-helix domain WM43_RS17185 PF02566 OsmC-like protein WM43_RS17200 PF00485 Phosphoribulokinase / Uridine kinase family WM43_RS17205 PF06794 Uncharacterised protein family (UPF0270) WM43_RS17210 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS17210 PF01590 GAF domain WM43_RS17210 PF00563 EAL domain WM43_RS17210 PF00360 Phytochrome region WM43_RS17215 PF00561 alpha/beta hydrolase fold WM43_RS17220 PF01584 CheW-like domain WM43_RS17220 PF00072 Response regulator receiver domain WM43_RS17230 PF09526 Probable metal-binding protein (DUF2387) WM43_RS17235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WM43_RS17250 PF03796 DnaB-like helicase C terminal domain WM43_RS17250 PF00772 DnaB-like helicase N terminal domain WM43_RS17255 PF01168 Alanine racemase, N-terminal domain WM43_RS17255 PF00842 Alanine racemase, C-terminal domain WM43_RS17260 PF01894 Uncharacterised protein family UPF0047 WM43_RS17265 PF03575 Peptidase family S51 WM43_RS17275 PF00005 ABC transporter WM43_RS17280 PF01032 FecCD transport family WM43_RS17290 PF06228 Haem utilisation ChuX/HutX WM43_RS17295 PF01243 Pyridoxamine 5'-phosphate oxidase WM43_RS17315 PF07715 TonB-dependent Receptor Plug Domain WM43_RS17315 PF00593 TonB dependent receptor WM43_RS17320 PF12832 MFS_1 like family WM43_RS17330 PF13443 Cro/C1-type HTH DNA-binding domain WM43_RS17340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS17340 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS17340 PF01627 Hpt domain WM43_RS17340 PF00072 Response regulator receiver domain WM43_RS17340 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) WM43_RS17340 PF00672 HAMP domain WM43_RS17345 PF08329 Chitinase A, N-terminal domain WM43_RS17345 PF00704 Glycosyl hydrolases family 18 WM43_RS17350 PF08448 PAS fold WM43_RS17350 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS17355 PF08329 Chitinase A, N-terminal domain WM43_RS17355 PF00704 Glycosyl hydrolases family 18 WM43_RS17360 PF17945 Beta/Gamma crystallin WM43_RS17360 PF12561 ToxR activated gene A lipoprotein domain WM43_RS17365 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading WM43_RS17365 PF18416 N-acetylglucosamine binding protein domain 2 WM43_RS17400 PF00704 Glycosyl hydrolases family 18 WM43_RS17400 PF06483 Chitinase C WM43_RS17405 PF01584 CheW-like domain WM43_RS17405 PF00072 Response regulator receiver domain WM43_RS17410 PF13472 GDSL-like Lipase/Acylhydrolase family WM43_RS17415 PF00005 ABC transporter WM43_RS17425 PF01370 NAD dependent epimerase/dehydratase family WM43_RS17425 PF08338 Domain of unknown function (DUF1731) WM43_RS17430 PF00563 EAL domain WM43_RS17430 PF12792 CSS motif domain associated with EAL WM43_RS17435 PF00155 Aminotransferase class I and II WM43_RS17440 PF02390 Putative methyltransferase WM43_RS17445 PF04320 Protein with unknown function (DUF469) WM43_RS17450 PF04960 Glutaminase WM43_RS17455 PF00581 Rhodanese-like domain WM43_RS17460 PF06004 Bacterial protein of unknown function (DUF903) WM43_RS17470 PF00994 Probable molybdopterin binding domain WM43_RS17480 PF06738 Putative threonine/serine exporter WM43_RS17485 PF12821 Threonine/Serine exporter, ThrE WM43_RS17490 PF00186 Dihydrofolate reductase WM43_RS17495 PF01507 Phosphoadenosine phosphosulfate reductase family WM43_RS17500 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain WM43_RS17500 PF01077 Nitrite and sulphite reductase 4Fe-4S domain WM43_RS17505 PF00258 Flavodoxin WM43_RS17505 PF00667 FAD binding domain WM43_RS17505 PF00175 Oxidoreductase NAD-binding domain WM43_RS17510 PF01336 OB-fold nucleic acid binding domain WM43_RS17510 PF00152 tRNA synthetases class II (D, K and N) WM43_RS17515 PF00472 RF-1 domain WM43_RS17515 PF03462 PCRF domain WM43_RS17520 PF02743 Cache domain WM43_RS17520 PF00672 HAMP domain WM43_RS17520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS17525 PF03616 Sodium/glutamate symporter WM43_RS17530 PF17763 Glutaminase/Asparaginase C-terminal domain WM43_RS17530 PF00710 Asparaginase, N-terminal WM43_RS17535 PF07023 Protein of unknown function (DUF1315) WM43_RS17540 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WM43_RS17540 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WM43_RS17555 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family WM43_RS17555 PF04055 Radical SAM superfamily WM43_RS17560 PF03099 Biotin/lipoate A/B protein ligase family WM43_RS17565 PF04359 Protein of unknown function (DUF493) WM43_RS17570 PF07943 Penicillin-binding protein 5, C-terminal domain WM43_RS17570 PF00768 D-alanyl-D-alanine carboxypeptidase WM43_RS17575 PF03330 Lytic transglycolase WM43_RS17575 PF05036 Sporulation related domain WM43_RS17580 PF13406 Transglycosylase SLT domain WM43_RS17585 PF01098 Cell cycle protein WM43_RS17590 PF03717 Penicillin-binding Protein dimerisation domain WM43_RS17590 PF00905 Penicillin binding protein transpeptidase domain WM43_RS17595 PF02590 Predicted SPOUT methyltransferase WM43_RS17605 PF01467 Cytidylyltransferase-like WM43_RS17620 PF00133 tRNA synthetases class I (I, L, M and V) WM43_RS17620 PF13603 Leucyl-tRNA synthetase, Domain 2 WM43_RS17620 PF08264 Anticodon-binding domain of tRNA WM43_RS17625 PF07295 Zinc-ribbon containing domain WM43_RS17630 PF01523 Putative modulator of DNA gyrase WM43_RS17635 PF01523 Putative modulator of DNA gyrase WM43_RS17640 PF00258 Flavodoxin WM43_RS17645 PF00589 Phage integrase family WM43_RS17645 PF02899 Phage integrase, N-terminal SAM-like domain WM43_RS17655 PF01741 Large-conductance mechanosensitive channel, MscL WM43_RS17665 PF01368 DHH family WM43_RS17665 PF02272 DHHA1 domain WM43_RS17665 PF17768 RecJ OB domain WM43_RS17670 PF00795 Carbon-nitrogen hydrolase WM43_RS17675 PF00571 CBS domain WM43_RS17675 PF03471 Transporter associated domain WM43_RS17680 PF02130 Uncharacterized protein family UPF0054 WM43_RS17685 PF02562 PhoH-like protein WM43_RS17690 PF01938 TRAM domain WM43_RS17690 PF00919 Uncharacterized protein family UPF0004 WM43_RS17690 PF04055 Radical SAM superfamily WM43_RS17695 PF01494 FAD binding domain WM43_RS17700 PF00857 Isochorismatase family WM43_RS17705 PF05230 MASE2 domain WM43_RS17705 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS17710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS17710 PF03466 LysR substrate binding domain WM43_RS17720 PF13419 Haloacid dehalogenase-like hydrolase WM43_RS17735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WM43_RS17735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WM43_RS17745 PF08207 Elongation factor P (EF-P) KOW-like domain WM43_RS17745 PF09285 Elongation factor P, C-terminal WM43_RS17745 PF01132 Elongation factor P (EF-P) OB domain WM43_RS17755 PF00478 IMP dehydrogenase / GMP reductase domain WM43_RS17765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS17765 PF08521 Two-component sensor kinase N-terminal WM43_RS17765 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS17770 PF00072 Response regulator receiver domain WM43_RS17770 PF00486 Transcriptional regulatory protein, C terminal WM43_RS17780 PF00106 short chain dehydrogenase WM43_RS17790 PF00501 AMP-binding enzyme WM43_RS17805 PF01266 FAD dependent oxidoreductase WM43_RS17815 PF00440 Bacterial regulatory proteins, tetR family WM43_RS17815 PF17932 Tetracyclin repressor-like, C-terminal domain WM43_RS17820 PF06224 Winged helix DNA-binding domain WM43_RS17830 PF07687 Peptidase dimerisation domain WM43_RS17830 PF01546 Peptidase family M20/M25/M40 WM43_RS17835 PF07670 Nucleoside recognition WM43_RS17840 PF07670 Nucleoside recognition WM43_RS17845 PF02313 Fumarate reductase subunit D WM43_RS17850 PF02300 Fumarate reductase subunit C WM43_RS17855 PF13085 2Fe-2S iron-sulfur cluster binding domain WM43_RS17855 PF13183 4Fe-4S dicluster domain WM43_RS17860 PF02910 Fumarate reductase flavoprotein C-term WM43_RS17860 PF00890 FAD binding domain WM43_RS17865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS17865 PF02743 Cache domain WM43_RS17865 PF00672 HAMP domain WM43_RS17870 PF03009 Glycerophosphoryl diester phosphodiesterase family WM43_RS17875 PF00924 Mechanosensitive ion channel WM43_RS17875 PF12795 Mechanosensitive ion channel porin domain WM43_RS17875 PF12794 Mechanosensitive ion channel inner membrane domain 1 WM43_RS17885 PF01476 LysM domain WM43_RS17885 PF08525 Opacity-associated protein A N-terminal motif WM43_RS17885 PF01551 Peptidase family M23 WM43_RS17895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS17895 PF03466 LysR substrate binding domain WM43_RS17910 PF00672 HAMP domain WM43_RS17910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS17915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS17915 PF03466 LysR substrate binding domain WM43_RS17920 PF00912 Transglycosylase WM43_RS17920 PF00905 Penicillin binding protein transpeptidase domain WM43_RS17920 PF17092 Penicillin-binding protein OB-like domain WM43_RS17925 PF11104 Type IV pilus assembly protein PilM; WM43_RS17945 PF11741 AMIN domain WM43_RS17945 PF07660 Secretin and TonB N terminus short domain WM43_RS17945 PF03958 Bacterial type II/III secretion system short domain WM43_RS17945 PF00263 Bacterial type II and III secretion system protein WM43_RS17950 PF01202 Shikimate kinase WM43_RS17955 PF01761 3-dehydroquinate synthase WM43_RS17965 PF02086 D12 class N6 adenine-specific DNA methyltransferase WM43_RS17970 PF00834 Ribulose-phosphate 3 epimerase family WM43_RS17975 PF13419 Haloacid dehalogenase-like hydrolase WM43_RS17980 PF00579 tRNA synthetases class I (W and Y) WM43_RS17990 PF00117 Glutamine amidotransferase class-I WM43_RS17995 PF00202 Aminotransferase class-III WM43_RS18000 PF04958 Arginine N-succinyltransferase beta subunit WM43_RS18005 PF00171 Aldehyde dehydrogenase family WM43_RS18020 PF13419 Haloacid dehalogenase-like hydrolase WM43_RS18025 PF07690 Major Facilitator Superfamily WM43_RS18030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WM43_RS18030 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg WM43_RS18030 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II WM43_RS18030 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase WM43_RS18030 PF10371 Domain of unknown function WM43_RS18035 PF00128 Alpha amylase, catalytic domain WM43_RS18035 PF16657 Maltogenic Amylase, C-terminal domain WM43_RS18045 PF04266 ASCH domain WM43_RS18055 PF01048 Phosphorylase superfamily WM43_RS18060 PF04973 Nicotinamide mononucleotide transporter WM43_RS18065 PF02080 TrkA-C domain WM43_RS18065 PF03600 Citrate transporter WM43_RS18110 PF01926 50S ribosome-binding GTPase WM43_RS18110 PF06071 Protein of unknown function (DUF933) WM43_RS18115 PF01195 Peptidyl-tRNA hydrolase WM43_RS18120 PF00149 Calcineurin-like phosphoesterase WM43_RS18120 PF02872 5'-nucleotidase, C-terminal domain WM43_RS18125 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase WM43_RS18125 PF14572 Phosphoribosyl synthetase-associated domain WM43_RS18135 PF08544 GHMP kinases C terminal WM43_RS18135 PF00288 GHMP kinases N terminal domain WM43_RS18140 PF03550 Outer membrane lipoprotein LolB WM43_RS18145 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain WM43_RS18145 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain WM43_RS18145 PF01488 Shikimate / quinate 5-dehydrogenase WM43_RS18150 PF00472 RF-1 domain WM43_RS18150 PF03462 PCRF domain WM43_RS18155 PF17827 PrmC N-terminal domain WM43_RS18155 PF13847 Methyltransferase domain WM43_RS18165 PF13369 Transglutaminase-like superfamily WM43_RS18170 PF00793 DAHP synthetase I family WM43_RS18175 PF01228 Glycine radical WM43_RS18180 PF05598 Transposase domain (DUF772) WM43_RS18180 PF01609 Transposase DDE domain WM43_RS18190 PF03167 Uracil DNA glycosylase superfamily WM43_RS18200 PF01204 Trehalase WM43_RS18210 PF01161 Phosphatidylethanolamine-binding protein WM43_RS18215 PF00709 Adenylosuccinate synthetase WM43_RS18230 PF00155 Aminotransferase class I and II WM43_RS18235 PF07690 Major Facilitator Superfamily WM43_RS18240 PF03466 LysR substrate binding domain WM43_RS18240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS18245 PF00106 short chain dehydrogenase WM43_RS18250 PF08496 Peptidase family S49 N-terminal WM43_RS18250 PF01343 Peptidase family S49 WM43_RS18255 PF07690 Major Facilitator Superfamily WM43_RS18260 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS18265 PF02635 DsrE/DsrF-like family WM43_RS18275 PF12838 4Fe-4S dicluster domain WM43_RS18280 PF16325 Peptidase family U32 C-terminal domain WM43_RS18280 PF01136 Peptidase family U32 WM43_RS18305 PF04996 Succinylarginine dihydrolase WM43_RS18310 PF01131 DNA topoisomerase WM43_RS18310 PF08272 Topoisomerase I zinc-ribbon-like WM43_RS18310 PF01396 Topoisomerase DNA binding C4 zinc finger WM43_RS18310 PF01751 Toprim domain WM43_RS18320 PF08447 PAS fold WM43_RS18320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS18325 PF00728 Glycosyl hydrolase family 20, catalytic domain WM43_RS18325 PF02838 Glycosyl hydrolase family 20, domain 2 WM43_RS18330 PF01869 BadF/BadG/BcrA/BcrD ATPase family WM43_RS18340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WM43_RS18340 PF00005 ABC transporter WM43_RS18345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WM43_RS18345 PF00005 ABC transporter WM43_RS18350 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS18350 PF12911 N-terminal TM domain of oligopeptide transport permease C WM43_RS18355 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS18360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WM43_RS18365 PF00072 Response regulator receiver domain WM43_RS18365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS18365 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS18365 PF09308 LuxQ, periplasmic WM43_RS18385 PF10725 Protein of unknown function (DUF2517) WM43_RS18395 PF05114 Protein of unknown function (DUF692) WM43_RS18415 PF13426 PAS domain WM43_RS18415 PF08447 PAS fold WM43_RS18415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS18430 PF04632 Fusaric acid resistance protein family WM43_RS18435 PF03453 MoeA N-terminal region (domain I and II) WM43_RS18435 PF00994 Probable molybdopterin binding domain WM43_RS18435 PF03454 MoeA C-terminal region (domain IV) WM43_RS18440 PF12804 MobA-like NTP transferase domain WM43_RS18445 PF00005 ABC transporter WM43_RS18450 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS18455 PF12849 PBP superfamily domain WM43_RS18460 PF00158 Sigma-54 interaction domain WM43_RS18460 PF02954 Bacterial regulatory protein, Fis family WM43_RS18460 PF00072 Response regulator receiver domain WM43_RS18465 PF00989 PAS fold WM43_RS18465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS18465 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS18475 PF02634 FdhD/NarQ family WM43_RS18480 PF01609 Transposase DDE domain WM43_RS18480 PF05598 Transposase domain (DUF772) WM43_RS18510 PF01568 Molydopterin dinucleotide binding domain WM43_RS18510 PF00384 Molybdopterin oxidoreductase WM43_RS18510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WM43_RS18510 PF12838 4Fe-4S dicluster domain WM43_RS18510 PF01568 Molydopterin dinucleotide binding domain WM43_RS18510 PF00384 Molybdopterin oxidoreductase WM43_RS18510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WM43_RS18510 PF12838 4Fe-4S dicluster domain WM43_RS18510 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WM43_RS18510 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WM43_RS18515 PF13247 4Fe-4S dicluster domain WM43_RS18535 PF00390 Malic enzyme, N-terminal domain WM43_RS18535 PF03949 Malic enzyme, NAD binding domain WM43_RS18540 PF05433 Glycine zipper 2TM domain WM43_RS18540 PF16998 17 kDa outer membrane surface antigen WM43_RS18550 PF00860 Permease family WM43_RS18555 PF00497 Bacterial extracellular solute-binding proteins, family 3 WM43_RS18560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS18560 PF00672 HAMP domain WM43_RS18585 PF02685 Glucokinase WM43_RS18590 PF01380 SIS domain WM43_RS18590 PF01418 Helix-turn-helix domain, rpiR family WM43_RS18595 PF00224 Pyruvate kinase, barrel domain WM43_RS18595 PF02887 Pyruvate kinase, alpha/beta domain WM43_RS18605 PF07969 Amidohydrolase family WM43_RS18615 PF02049 Flagellar hook-basal body complex protein FliE WM43_RS18620 PF08345 Flagellar M-ring protein C-terminal WM43_RS18620 PF01514 Secretory protein of YscJ/FliF family WM43_RS18625 PF01706 FliG C-terminal domain WM43_RS18625 PF14841 FliG middle domain WM43_RS18625 PF14842 FliG N-terminal domain WM43_RS18635 PF18269 T3SS EscN ATPase C-terminal domain WM43_RS18635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WM43_RS18655 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term WM43_RS18655 PF02154 Flagellar motor switch protein FliM WM43_RS18660 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term WM43_RS18665 PF04347 Flagellar biosynthesis protein, FliO WM43_RS18670 PF00813 FliP family WM43_RS18675 PF01313 Bacterial export proteins, family 3 WM43_RS18680 PF01311 Bacterial export proteins, family 1 WM43_RS18685 PF01312 FlhB HrpN YscU SpaS Family WM43_RS18690 PF00771 FHIPEP family WM43_RS18695 PF00448 SRP54-type protein, GTPase domain WM43_RS18700 PF10609 NUBPL iron-transfer P-loop NTPase WM43_RS18705 PF04542 Sigma-70 region 2 WM43_RS18705 PF04545 Sigma-70, region 4 WM43_RS18705 PF04539 Sigma-70 region 3 WM43_RS18710 PF00072 Response regulator receiver domain WM43_RS18715 PF04344 Chemotaxis phosphatase, CheZ WM43_RS18720 PF01627 Hpt domain WM43_RS18720 PF00072 Response regulator receiver domain WM43_RS18720 PF02895 Signal transducing histidine kinase, homodimeric domain WM43_RS18720 PF01584 CheW-like domain WM43_RS18720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS18725 PF01339 CheB methylesterase WM43_RS18725 PF00072 Response regulator receiver domain WM43_RS18730 PF01618 MotA/TolQ/ExbB proton channel family WM43_RS18735 PF00691 OmpA family WM43_RS18735 PF13677 Membrane MotB of proton-channel complex MotA/MotB WM43_RS18740 PF13614 AAA domain WM43_RS18750 PF01584 CheW-like domain WM43_RS18760 PF00005 ABC transporter WM43_RS18765 PF03379 CcmB protein WM43_RS18770 PF01578 Cytochrome C assembly protein WM43_RS18775 PF04995 Heme exporter protein D (CcmD) WM43_RS18780 PF03100 CcmE WM43_RS18785 PF01578 Cytochrome C assembly protein WM43_RS18785 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal WM43_RS18790 PF08534 Redoxin WM43_RS18795 PF03918 Cytochrome C biogenesis protein WM43_RS18805 PF04333 MlaA lipoprotein WM43_RS18810 PF13006 Insertion element 4 transposase N-terminal WM43_RS18810 PF01609 Transposase DDE domain WM43_RS18815 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WM43_RS18815 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WM43_RS18820 PF00462 Glutaredoxin WM43_RS18830 PF03222 Tryptophan/tyrosine permease family WM43_RS18835 PF00291 Pyridoxal-phosphate dependent enzyme WM43_RS18845 PF00871 Acetokinase family WM43_RS18850 PF02901 Pyruvate formate lyase-like WM43_RS18850 PF01228 Glycine radical WM43_RS18855 PF01042 Endoribonuclease L-PSP WM43_RS18860 PF01189 16S rRNA methyltransferase RsmB/F WM43_RS18860 PF01029 NusB family WM43_RS18880 PF01609 Transposase DDE domain WM43_RS18880 PF13808 DDE_Tnp_1-associated WM43_RS18890 PF01527 Transposase WM43_RS18895 PF13276 HTH-like domain WM43_RS18895 PF00665 Integrase core domain WM43_RS18905 PF05598 Transposase domain (DUF772) WM43_RS18905 PF01609 Transposase DDE domain WM43_RS18915 PF01243 Pyridoxamine 5'-phosphate oxidase WM43_RS18915 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region WM43_RS18920 PF00043 Glutathione S-transferase, C-terminal domain WM43_RS18920 PF13417 Glutathione S-transferase, N-terminal domain WM43_RS18940 PF08007 Cupin superfamily protein WM43_RS18945 PF08328 Adenylosuccinate lyase C-terminal WM43_RS18945 PF00206 Lyase WM43_RS18950 PF04356 Protein of unknown function (DUF489) WM43_RS18960 PF00293 NUDIX domain WM43_RS18965 PF00849 RNA pseudouridylate synthase WM43_RS18975 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit WM43_RS18980 PF07690 Major Facilitator Superfamily WM43_RS18985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit WM43_RS18985 PF02378 Phosphotransferase system, EIIC WM43_RS18985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 WM43_RS19005 PF05598 Transposase domain (DUF772) WM43_RS19005 PF01609 Transposase DDE domain WM43_RS19015 PF02075 Crossover junction endodeoxyribonuclease RuvC WM43_RS19025 PF00873 AcrB/AcrD/AcrF family WM43_RS19030 PF02770 Acyl-CoA dehydrogenase, middle domain WM43_RS19030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM43_RS19030 PF09317 Domain of unknown function (DUF1974) WM43_RS19030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM43_RS19035 PF00440 Bacterial regulatory proteins, tetR family WM43_RS19050 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WM43_RS19050 PF00037 4Fe-4S binding domain WM43_RS19050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WM43_RS19050 PF01568 Molydopterin dinucleotide binding domain WM43_RS19050 PF00384 Molybdopterin oxidoreductase WM43_RS19055 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS19055 PF00563 EAL domain WM43_RS19055 PF03707 Bacterial signalling protein N terminal repeat WM43_RS19060 PF09456 RcsC Alpha-Beta-Loop (ABL) WM43_RS19060 PF00072 Response regulator receiver domain WM43_RS19060 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS19060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS19070 PF01668 SmpB protein WM43_RS19075 PF03364 Polyketide cyclase / dehydrase and lipid transport WM43_RS19080 PF03658 RnfH family Ubiquitin WM43_RS19085 PF07687 Peptidase dimerisation domain WM43_RS19085 PF01546 Peptidase family M20/M25/M40 WM43_RS19090 PF09317 Domain of unknown function (DUF1974) WM43_RS19090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM43_RS19090 PF02770 Acyl-CoA dehydrogenase, middle domain WM43_RS19090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM43_RS19095 PF13580 SIS domain WM43_RS19100 PF13230 Glutamine amidotransferases class-II WM43_RS19110 PF01933 Uncharacterised protein family UPF0052 WM43_RS19130 PF00072 Response regulator receiver domain WM43_RS19130 PF00196 Bacterial regulatory proteins, luxR family WM43_RS19135 PF00672 HAMP domain WM43_RS19135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS19135 PF07730 Histidine kinase WM43_RS19135 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term WM43_RS19140 PF04055 Radical SAM superfamily WM43_RS19140 PF06463 Molybdenum Cofactor Synthesis C WM43_RS19145 PF12838 4Fe-4S dicluster domain WM43_RS19145 PF13187 4Fe-4S dicluster domain WM43_RS19155 PF10518 TAT (twin-arginine translocation) pathway signal sequence WM43_RS19155 PF00384 Molybdopterin oxidoreductase WM43_RS19155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WM43_RS19155 PF01568 Molydopterin dinucleotide binding domain WM43_RS19160 PF12800 4Fe-4S binding domain WM43_RS19160 PF12838 4Fe-4S dicluster domain WM43_RS19165 PF12837 4Fe-4S binding domain WM43_RS19165 PF12801 4Fe-4S binding domain WM43_RS19170 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) WM43_RS19175 PF03264 NapC/NirT cytochrome c family, N-terminal region WM43_RS19180 PF00994 Probable molybdopterin binding domain WM43_RS19185 PF01967 MoaC family WM43_RS19190 PF02597 ThiS family WM43_RS19195 PF02391 MoaE protein WM43_RS19205 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS19210 PF00005 ABC transporter WM43_RS19210 PF03459 TOBE domain WM43_RS19215 PF00561 alpha/beta hydrolase fold WM43_RS19220 PF00899 ThiF family WM43_RS19225 PF03453 MoeA N-terminal region (domain I and II) WM43_RS19225 PF03454 MoeA C-terminal region (domain IV) WM43_RS19225 PF00994 Probable molybdopterin binding domain WM43_RS19230 PF01227 GTP cyclohydrolase I WM43_RS19235 PF00672 HAMP domain WM43_RS19235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS19235 PF17200 Single Cache domain 2 WM43_RS19240 PF01268 Formate--tetrahydrofolate ligase WM43_RS19250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS19250 PF03466 LysR substrate binding domain WM43_RS19255 PF04264 YceI-like domain WM43_RS19265 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain WM43_RS19265 PF05221 S-adenosyl-L-homocysteine hydrolase WM43_RS19280 PF01546 Peptidase family M20/M25/M40 WM43_RS19280 PF07687 Peptidase dimerisation domain WM43_RS19285 PF17944 Arginine decarboxylase C-terminal helical extension WM43_RS19285 PF17810 Arginine decarboxylase helical bundle domain WM43_RS19285 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain WM43_RS19295 PF14863 Alkyl sulfatase dimerisation WM43_RS19295 PF14864 Alkyl sulfatase C-terminal WM43_RS19295 PF00753 Metallo-beta-lactamase superfamily WM43_RS19310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS19310 PF00672 HAMP domain WM43_RS19310 PF12729 Four helix bundle sensory module for signal transduction WM43_RS19320 PF01042 Endoribonuclease L-PSP WM43_RS19325 PF03313 Serine dehydratase alpha chain WM43_RS19330 PF08348 YheO-like PAS domain WM43_RS19330 PF13309 HTH domain WM43_RS19335 PF00300 Histidine phosphatase superfamily (branch 1) WM43_RS19340 PF00672 HAMP domain WM43_RS19340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS19340 PF12729 Four helix bundle sensory module for signal transduction WM43_RS19345 PF12241 Trans-2-enoyl-CoA reductase catalytic region WM43_RS19345 PF07055 Enoyl reductase FAD binding domain WM43_RS19345 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase WM43_RS19350 PF03606 C4-dicarboxylate anaerobic carrier WM43_RS19355 PF00155 Aminotransferase class I and II WM43_RS19365 PF00230 Major intrinsic protein WM43_RS19370 PF01464 Transglycosylase SLT domain WM43_RS19370 PF01551 Peptidase family M23 WM43_RS19370 PF10145 Phage-related minor tail protein WM43_RS19385 PF13091 PLD-like domain WM43_RS19385 PF13396 Phospholipase_D-nuclease N-terminal WM43_RS19395 PF01842 ACT domain WM43_RS19395 PF00551 Formyl transferase WM43_RS19400 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WM43_RS19410 PF00085 Thioredoxin WM43_RS19415 PF01648 4'-phosphopantetheinyl transferase superfamily WM43_RS19420 PF00877 NlpC/P60 family WM43_RS19425 PF05971 RNA methyltransferase WM43_RS19430 PF01575 MaoC like domain WM43_RS19435 PF00939 Sodium:sulfate symporter transmembrane region WM43_RS19445 PF17969 L,D-transpeptidase C-terminal domain WM43_RS19445 PF03734 L,D-transpeptidase catalytic domain WM43_RS19445 PF01476 LysM domain WM43_RS19455 PF00176 SNF2 family N-terminal domain WM43_RS19455 PF00271 Helicase conserved C-terminal domain WM43_RS19455 PF04434 SWIM zinc finger WM43_RS19460 PF05472 DNA replication terminus site-binding protein (Ter protein) WM43_RS19470 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family WM43_RS19475 PF01476 LysM domain WM43_RS19475 PF01464 Transglycosylase SLT domain WM43_RS19480 PF00753 Metallo-beta-lactamase superfamily WM43_RS19480 PF16123 Hydroxyacylglutathione hydrolase C-terminus WM43_RS19485 PF08241 Methyltransferase domain WM43_RS19490 PF00075 RNase H WM43_RS19495 PF00929 Exonuclease WM43_RS19505 PF11849 Domain of unknown function (DUF3369) WM43_RS19510 PF04954 Siderophore-interacting protein WM43_RS19510 PF08021 Siderophore-interacting FAD-binding domain WM43_RS19515 PF07715 TonB-dependent Receptor Plug Domain WM43_RS19515 PF00593 TonB dependent receptor WM43_RS19520 PF01032 FecCD transport family WM43_RS19525 PF01032 FecCD transport family WM43_RS19530 PF00005 ABC transporter WM43_RS19535 PF01497 Periplasmic binding protein WM43_RS19545 PF00873 AcrB/AcrD/AcrF family WM43_RS19550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM43_RS19550 PF00529 HlyD membrane-fusion protein of T1SS WM43_RS19560 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) WM43_RS19575 PF00873 AcrB/AcrD/AcrF family WM43_RS19580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM43_RS19585 PF03372 Endonuclease/Exonuclease/phosphatase family WM43_RS19600 PF02424 ApbE family WM43_RS19605 PF00127 Copper binding proteins, plastocyanin/azurin family WM43_RS19615 PF04337 Protein of unknown function, DUF480 WM43_RS19620 PF03707 Bacterial signalling protein N terminal repeat WM43_RS19620 PF13188 PAS domain WM43_RS19620 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS19620 PF00563 EAL domain WM43_RS19630 PF04325 Protein of unknown function (DUF465) WM43_RS19640 PF01554 MatE WM43_RS19660 PF00465 Iron-containing alcohol dehydrogenase WM43_RS19670 PF08359 YsiA-like protein, C-terminal region WM43_RS19670 PF00440 Bacterial regulatory proteins, tetR family WM43_RS19675 PF00171 Aldehyde dehydrogenase family WM43_RS19685 PF01156 Inosine-uridine preferring nucleoside hydrolase WM43_RS19695 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WM43_RS19695 PF00034 Cytochrome c WM43_RS19705 PF05656 Protein of unknown function (DUF805) WM43_RS19720 PF00582 Universal stress protein family WM43_RS19725 PF01740 STAS domain WM43_RS19725 PF00916 Sulfate permease family WM43_RS19740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS19740 PF00672 HAMP domain WM43_RS19745 PF01238 Phosphomannose isomerase type I WM43_RS19750 PF12833 Helix-turn-helix domain WM43_RS19755 PF00180 Isocitrate/isopropylmalate dehydrogenase WM43_RS19760 PF03466 LysR substrate binding domain WM43_RS19760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS19765 PF00877 NlpC/P60 family WM43_RS19770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS19770 PF03466 LysR substrate binding domain WM43_RS19775 PF00578 AhpC/TSA family WM43_RS19775 PF10417 C-terminal domain of 1-Cys peroxiredoxin WM43_RS19795 PF08003 Protein of unknown function (DUF1698) WM43_RS19800 PF13649 Methyltransferase domain WM43_RS19805 PF01904 Protein of unknown function DUF72 WM43_RS19810 PF02938 GAD domain WM43_RS19810 PF00152 tRNA synthetases class II (D, K and N) WM43_RS19810 PF01336 OB-fold nucleic acid binding domain WM43_RS19815 PF01709 Transcriptional regulator WM43_RS19820 PF00465 Iron-containing alcohol dehydrogenase WM43_RS19820 PF00171 Aldehyde dehydrogenase family WM43_RS19825 PF01914 MarC family integral membrane protein WM43_RS19830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WM43_RS19835 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS19840 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS19840 PF12911 N-terminal TM domain of oligopeptide transport permease C WM43_RS19845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WM43_RS19845 PF00005 ABC transporter WM43_RS19850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WM43_RS19850 PF00005 ABC transporter WM43_RS19855 PF03741 Integral membrane protein TerC family WM43_RS19860 PF01168 Alanine racemase, N-terminal domain WM43_RS19860 PF00842 Alanine racemase, C-terminal domain WM43_RS19865 PF04191 Phospholipid methyltransferase WM43_RS19870 PF00437 Type II/IV secretion system protein WM43_RS19885 PF01032 FecCD transport family WM43_RS19890 PF00005 ABC transporter WM43_RS19895 PF00793 DAHP synthetase I family WM43_RS19900 PF01219 Prokaryotic diacylglycerol kinase WM43_RS19905 PF01842 ACT domain WM43_RS19905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WM43_RS19905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WM43_RS19910 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) WM43_RS19915 PF01812 5-formyltetrahydrofolate cyclo-ligase family WM43_RS19930 PF01113 Dihydrodipicolinate reductase, N-terminus WM43_RS19930 PF05173 Dihydrodipicolinate reductase, C-terminus WM43_RS19935 PF00117 Glutamine amidotransferase class-I WM43_RS19935 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain WM43_RS19940 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WM43_RS19940 PF02142 MGS-like domain WM43_RS19940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WM43_RS19945 PF07759 Protein of unknown function (DUF1615) WM43_RS19950 PF02153 Prephenate dehydrogenase WM43_RS19950 PF01817 Chorismate mutase type II WM43_RS19955 PF00793 DAHP synthetase I family WM43_RS19960 PF00483 Nucleotidyl transferase WM43_RS19965 PF07549 SecD/SecF GG Motif WM43_RS19965 PF02355 Protein export membrane protein WM43_RS19970 PF07549 SecD/SecF GG Motif WM43_RS19970 PF13721 SecD export protein N-terminal TM region WM43_RS19970 PF02355 Protein export membrane protein WM43_RS20005 PF01230 HIT domain WM43_RS20010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS20010 PF00672 HAMP domain WM43_RS20020 PF01979 Amidohydrolase family WM43_RS20035 PF00375 Sodium:dicarboxylate symporter family WM43_RS20040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS20040 PF12729 Four helix bundle sensory module for signal transduction WM43_RS20040 PF00672 HAMP domain WM43_RS20050 PF05661 Protein of unknown function (DUF808) WM43_RS20055 PF08439 Oligopeptidase F WM43_RS20055 PF01432 Peptidase family M3 WM43_RS20060 PF00860 Permease family WM43_RS20065 PF05728 Uncharacterised protein family (UPF0227) WM43_RS20070 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM43_RS20080 PF04055 Radical SAM superfamily WM43_RS20085 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS20085 PF03707 Bacterial signalling protein N terminal repeat WM43_RS20085 PF00563 EAL domain WM43_RS20090 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM43_RS20090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WM43_RS20100 PF07703 Alpha-2-macroglobulin bait region domain WM43_RS20100 PF01835 MG2 domain WM43_RS20100 PF07678 A-macroglobulin TED domain WM43_RS20100 PF00207 Alpha-2-macroglobulin family WM43_RS20100 PF11974 Bacterial alpha-2-macroglobulin MG3 domain WM43_RS20100 PF17962 Bacterial macroglobulin domain 6 WM43_RS20100 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain WM43_RS20100 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain WM43_RS20100 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain WM43_RS20105 PF06832 Penicillin-Binding Protein C-terminus Family WM43_RS20105 PF00905 Penicillin binding protein transpeptidase domain WM43_RS20105 PF00912 Transglycosylase WM43_RS20115 PF00589 Phage integrase family WM43_RS20115 PF12167 Arm DNA-binding domain WM43_RS20160 PF04381 Putative exonuclease, RdgC WM43_RS20185 PF06630 Enterobacterial exodeoxyribonuclease VIII WM43_RS20185 PF12684 PDDEXK-like domain of unknown function (DUF3799) WM43_RS20240 PF00145 C-5 cytosine-specific DNA methylase WM43_RS20445 PF02926 THUMP domain WM43_RS20445 PF02568 Thiamine biosynthesis protein (ThiI) WM43_RS20455 PF03458 UPF0126 domain WM43_RS20460 PF00700 Bacterial flagellin C-terminal helical region WM43_RS20460 PF07196 Flagellin hook IN motif WM43_RS20460 PF00669 Bacterial flagellin N-terminal helical region WM43_RS20465 PF03646 FlaG protein WM43_RS20470 PF07195 Flagellar hook-associated protein 2 C-terminus WM43_RS20470 PF07196 Flagellin hook IN motif WM43_RS20470 PF02465 Flagellar hook-associated protein 2 N-terminus WM43_RS20475 PF02561 Flagellar protein FliS WM43_RS20500 PF13358 DDE superfamily endonuclease WM43_RS20505 PF01497 Periplasmic binding protein WM43_RS20515 PF01048 Phosphorylase superfamily WM43_RS20520 PF02535 ZIP Zinc transporter WM43_RS20525 PF13006 Insertion element 4 transposase N-terminal WM43_RS20525 PF01609 Transposase DDE domain WM43_RS20530 PF00459 Inositol monophosphatase family WM43_RS20540 PF01385 Probable transposase WM43_RS20540 PF12323 Helix-turn-helix domain WM43_RS20540 PF07282 Putative transposase DNA-binding domain WM43_RS20550 PF00043 Glutathione S-transferase, C-terminal domain WM43_RS20550 PF02798 Glutathione S-transferase, N-terminal domain WM43_RS20555 PF07690 Major Facilitator Superfamily WM43_RS20565 PF05164 Cell division protein ZapA WM43_RS20570 PF03695 Uncharacterised protein family (UPF0149) WM43_RS20575 PF01494 FAD binding domain WM43_RS20580 PF01494 FAD binding domain WM43_RS20585 PF01571 Aminomethyltransferase folate-binding domain WM43_RS20585 PF08669 Glycine cleavage T-protein C-terminal barrel domain WM43_RS20590 PF01597 Glycine cleavage H-protein WM43_RS20595 PF02347 Glycine cleavage system P-protein WM43_RS20605 PF02384 N-6 DNA Methylase WM43_RS20605 PF12161 HsdM N-terminal domain WM43_RS20610 PF01420 Type I restriction modification DNA specificity domain WM43_RS20615 PF02810 SEC-C motif WM43_RS20615 PF03695 Uncharacterised protein family (UPF0149) WM43_RS20620 PF12592 Protein of unknown function (DUF3763) WM43_RS20620 PF07728 AAA domain (dynein-related subfamily) WM43_RS20620 PF17868 AAA lid domain WM43_RS20625 PF05762 VWA domain containing CoxE-like protein WM43_RS20630 PF11867 Domain of unknown function (DUF3387) WM43_RS20630 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) WM43_RS20630 PF18766 SWI2/SNF2 ATPase WM43_RS20690 PF00271 Helicase conserved C-terminal domain WM43_RS20690 PF00176 SNF2 family N-terminal domain WM43_RS20690 PF12419 SNF2 Helicase protein WM43_RS20695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS20695 PF00672 HAMP domain WM43_RS20700 PF00665 Integrase core domain WM43_RS20705 PF01695 IstB-like ATP binding protein WM43_RS20710 PF08447 PAS fold WM43_RS20710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM43_RS20730 PF00324 Amino acid permease WM43_RS20740 PF03618 Kinase/pyrophosphorylase WM43_RS20745 PF00391 PEP-utilising enzyme, mobile domain WM43_RS20745 PF02896 PEP-utilising enzyme, TIM barrel domain WM43_RS20745 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain WM43_RS20755 PF01483 Proprotein convertase P-domain WM43_RS20755 PF00082 Subtilase family WM43_RS20760 PF03180 NLPA lipoprotein WM43_RS20765 PF00884 Sulfatase WM43_RS20765 PF11893 Domain of unknown function (DUF3413) WM43_RS20770 PF07208 Protein of unknown function (DUF1414) WM43_RS20775 PF04245 37-kD nucleoid-associated bacterial protein WM43_RS20780 PF01547 Bacterial extracellular solute-binding protein WM43_RS20785 PF14785 Maltose transport system permease protein MalF P2 domain WM43_RS20785 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS20790 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS20795 PF00005 ABC transporter WM43_RS20795 PF08402 TOBE domain WM43_RS20800 PF03976 Polyphosphate kinase 2 (PPK2) WM43_RS20805 PF00561 alpha/beta hydrolase fold WM43_RS20815 PF01594 AI-2E family transporter WM43_RS20820 PF01206 Sulfurtransferase TusA WM43_RS20825 PF01435 Peptidase family M48 WM43_RS20825 PF07720 Tetratricopeptide repeat WM43_RS20830 PF00578 AhpC/TSA family WM43_RS20835 PF03960 ArsC family WM43_RS20845 PF04336 Acyl carrier protein phosphodiesterase WM43_RS20850 PF01979 Amidohydrolase family WM43_RS20855 PF03956 Lysine exporter LysO WM43_RS20860 PF00005 ABC transporter WM43_RS20865 PF00497 Bacterial extracellular solute-binding proteins, family 3 WM43_RS20870 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS20875 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS20885 PF00849 RNA pseudouridylate synthase WM43_RS20895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WM43_RS20900 PF04209 homogentisate 1,2-dioxygenase WM43_RS20910 PF02798 Glutathione S-transferase, N-terminal domain WM43_RS20910 PF14497 Glutathione S-transferase, C-terminal domain WM43_RS20915 PF01970 Tripartite tricarboxylate transporter TctA family WM43_RS20930 PF00072 Response regulator receiver domain WM43_RS20930 PF00486 Transcriptional regulatory protein, C terminal WM43_RS20935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM43_RS20935 PF08521 Two-component sensor kinase N-terminal WM43_RS20935 PF00512 His Kinase A (phospho-acceptor) domain WM43_RS20940 PF04226 Transglycosylase associated protein WM43_RS20945 PF18642 Immunomodulating metalloprotease helical domain WM43_RS20945 PF18650 Immunomodulating metalloprotease N-terminal domain WM43_RS20945 PF13402 Peptidase M60, enhancin and enhancin-like WM43_RS20950 PF00149 Calcineurin-like phosphoesterase WM43_RS20960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WM43_RS20965 PF09190 DALR domain WM43_RS20965 PF01406 tRNA synthetases class I (C) catalytic domain WM43_RS20975 PF13808 DDE_Tnp_1-associated WM43_RS20975 PF01609 Transposase DDE domain WM43_RS20990 PF13333 Integrase core domain WM43_RS20990 PF00665 Integrase core domain WM43_RS20990 PF13276 HTH-like domain WM43_RS21035 PF01169 Uncharacterized protein family UPF0016 WM43_RS21040 PF01253 Translation initiation factor SUI1 WM43_RS21050 PF07670 Nucleoside recognition WM43_RS21050 PF02421 Ferrous iron transport protein B WM43_RS21050 PF07664 Ferrous iron transport protein B C terminus WM43_RS21065 PF00271 Helicase conserved C-terminal domain WM43_RS21065 PF00270 DEAD/DEAH box helicase WM43_RS21070 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM43_RS21070 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster WM43_RS21075 PF04898 Glutamate synthase central domain WM43_RS21075 PF01645 Conserved region in glutamate synthase WM43_RS21075 PF00310 Glutamine amidotransferases class-II WM43_RS21075 PF01493 GXGXG motif WM43_RS21085 PF04055 Radical SAM superfamily WM43_RS21085 PF16199 Radical_SAM C-terminal domain WM43_RS21090 PF03412 Peptidase C39 family WM43_RS21090 PF00005 ABC transporter WM43_RS21090 PF00664 ABC transporter transmembrane region WM43_RS21135 PF13192 Thioredoxin domain WM43_RS21135 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM43_RS21140 PF10417 C-terminal domain of 1-Cys peroxiredoxin WM43_RS21140 PF00578 AhpC/TSA family WM43_RS21145 PF00571 CBS domain WM43_RS21150 PF02547 Queuosine biosynthesis protein WM43_RS21155 PF01702 Queuine tRNA-ribosyltransferase WM43_RS21160 PF02699 Preprotein translocase subunit WM43_RS21165 PF13721 SecD export protein N-terminal TM region WM43_RS21165 PF02355 Protein export membrane protein WM43_RS21165 PF07549 SecD/SecF GG Motif WM43_RS21170 PF02355 Protein export membrane protein WM43_RS21170 PF07549 SecD/SecF GG Motif WM43_RS21180 PF13181 Tetratricopeptide repeat WM43_RS21180 PF07719 Tetratricopeptide repeat WM43_RS21185 PF01136 Peptidase family U32 WM43_RS21190 PF01136 Peptidase family U32 WM43_RS21195 PF02036 SCP-2 sterol transfer family WM43_RS21205 PF00588 SpoU rRNA Methylase family WM43_RS21210 PF02082 Transcriptional regulator WM43_RS21215 PF00266 Aminotransferase class-V WM43_RS21220 PF01592 NifU-like N terminal domain WM43_RS21225 PF01521 Iron-sulphur cluster biosynthesis WM43_RS21230 PF00226 DnaJ domain WM43_RS21230 PF07743 HSCB C-terminal oligomerisation domain WM43_RS21235 PF00012 Hsp70 protein WM43_RS21240 PF00111 2Fe-2S iron-sulfur cluster binding domain WM43_RS21245 PF12404 Peptidase WM43_RS21245 PF00883 Cytosol aminopeptidase family, catalytic domain WM43_RS21250 PF12404 Peptidase WM43_RS21250 PF00883 Cytosol aminopeptidase family, catalytic domain WM43_RS21255 PF00334 Nucleoside diphosphate kinase WM43_RS21260 PF04055 Radical SAM superfamily WM43_RS21270 PF13464 Domain of unknown function (DUF4115) WM43_RS21275 PF04551 GcpE protein WM43_RS21280 PF03129 Anticodon binding domain WM43_RS21280 PF13393 Histidyl-tRNA synthetase WM43_RS21285 PF09976 Tetratricopeptide repeat-like domain WM43_RS21290 PF13360 PQQ-like domain WM43_RS21295 PF01926 50S ribosome-binding GTPase WM43_RS21295 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal WM43_RS21300 PF07191 zinc-ribbons WM43_RS21305 PF00497 Bacterial extracellular solute-binding proteins, family 3 WM43_RS21305 PF01464 Transglycosylase SLT domain WM43_RS21310 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain WM43_RS21310 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal WM43_RS21310 PF02769 AIR synthase related protein, C-terminal domain WM43_RS21315 PF01966 HD domain WM43_RS21320 PF00072 Response regulator receiver domain WM43_RS21330 PF00361 Proton-conducting membrane transporter WM43_RS21335 PF00361 Proton-conducting membrane transporter WM43_RS21340 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WM43_RS21340 PF00361 Proton-conducting membrane transporter WM43_RS21345 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WM43_RS21350 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 WM43_RS21355 PF12838 4Fe-4S dicluster domain WM43_RS21360 PF00146 NADH dehydrogenase WM43_RS21365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WM43_RS21365 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WM43_RS21365 PF00384 Molybdopterin oxidoreductase WM43_RS21370 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit WM43_RS21370 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WM43_RS21380 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit WM43_RS21380 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit WM43_RS21385 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WM43_RS21390 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 WM43_RS21410 PF00326 Prolyl oligopeptidase family WM43_RS21410 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain WM43_RS21415 PF00593 TonB dependent receptor WM43_RS21415 PF07715 TonB-dependent Receptor Plug Domain WM43_RS21420 PF00691 OmpA family WM43_RS21420 PF13677 Membrane MotB of proton-channel complex MotA/MotB WM43_RS21425 PF01618 MotA/TolQ/ExbB proton channel family WM43_RS21430 PF01527 Transposase WM43_RS21435 PF00665 Integrase core domain WM43_RS21435 PF13276 HTH-like domain WM43_RS21440 PF01618 MotA/TolQ/ExbB proton channel family WM43_RS21455 PF04536 TPM domain WM43_RS21465 PF03411 Penicillin-insensitive murein endopeptidase WM43_RS21470 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS21475 PF00497 Bacterial extracellular solute-binding proteins, family 3 WM43_RS21480 PF00528 Binding-protein-dependent transport system inner membrane component WM43_RS21485 PF00005 ABC transporter WM43_RS21495 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) WM43_RS21500 PF00248 Aldo/keto reductase family WM43_RS21510 PF00106 short chain dehydrogenase WM43_RS21515 PF01212 Beta-eliminating lyase WM43_RS21525 PF00072 Response regulator receiver domain WM43_RS21530 PF03466 LysR substrate binding domain WM43_RS21530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS21535 PF00563 EAL domain WM43_RS21535 PF00990 Diguanylate cyclase, GGDEF domain WM43_RS21535 PF13188 PAS domain WM43_RS21535 PF03707 Bacterial signalling protein N terminal repeat WM43_RS21540 PF03806 AbgT putative transporter family WM43_RS21545 PF00881 Nitroreductase family WM43_RS21560 PF07690 Major Facilitator Superfamily WM43_RS21565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS21565 PF03466 LysR substrate binding domain WM43_RS21570 PF03466 LysR substrate binding domain WM43_RS21570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS21575 PF00925 GTP cyclohydrolase II WM43_RS21580 PF02224 Cytidylate kinase WM43_RS21585 PF00575 S1 RNA binding domain WM43_RS21590 PF00216 Bacterial DNA-binding protein WM43_RS21600 PF18073 Rubredoxin metal binding domain WM43_RS21605 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family WM43_RS21620 PF06508 Queuosine biosynthesis protein QueC WM43_RS21935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS21935 PF03466 LysR substrate binding domain WM43_RS21950 PF08402 TOBE domain WM43_RS21950 PF00005 ABC transporter WM43_RS22070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM43_RS22070 PF03466 LysR substrate binding domain WM43_RS22105 PF08267 Cobalamin-independent synthase, N-terminal domain WM43_RS22105 PF01717 Cobalamin-independent synthase, Catalytic domain WM43_RS22140 PF00232 Glycosyl hydrolase family 1 WM43_RS22150 PF00232 Glycosyl hydrolase family 1 WM43_RS22185 PF02901 Pyruvate formate lyase-like WM43_RS22185 PF01228 Glycine radical WM43_RS22225 PF00343 Carbohydrate phosphorylase WM43_RS22370 PF16078 2-oxoglutarate dehydrogenase N-terminus WM43_RS22370 PF02779 Transketolase, pyrimidine binding domain WM43_RS22370 PF00676 Dehydrogenase E1 component WM43_RS22370 PF16870 2-oxoglutarate dehydrogenase C-terminal WM43_RS22450 PF00378 Enoyl-CoA hydratase/isomerase WM43_RS22685 PF00534 Glycosyl transferases group 1 WM43_RS22685 PF13439 Glycosyltransferase Family 4