locus-tag class description GRF56_RS00105 PF03739 Lipopolysaccharide export system permease LptF/LptG GRF56_RS00110 PF03739 Lipopolysaccharide export system permease LptF/LptG GRF56_RS00115 PF02789 Cytosol aminopeptidase family, N-terminal domain GRF56_RS00115 PF00883 Cytosol aminopeptidase family, catalytic domain GRF56_RS00120 PF04364 DNA polymerase III chi subunit, HolC GRF56_RS00125 PF10458 Valyl tRNA synthetase tRNA binding arm GRF56_RS00125 PF00133 tRNA synthetases class I (I, L, M and V) GRF56_RS00125 PF08264 Anticodon-binding domain of tRNA GRF56_RS00145 PF00583 Acetyltransferase (GNAT) family GRF56_RS00150 PF06628 Catalase-related immune-responsive GRF56_RS00150 PF00199 Catalase GRF56_RS00170 PF00196 Bacterial regulatory proteins, luxR family GRF56_RS00175 PF01479 S4 domain GRF56_RS00175 PF00579 tRNA synthetases class I (W and Y) GRF56_RS00180 PF00561 alpha/beta hydrolase fold GRF56_RS00185 PF03280 Proteobacterial lipase chaperone protein GRF56_RS00200 PF00141 Peroxidase GRF56_RS00205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GRF56_RS00205 PF12793 Sugar transport-related sRNA regulator N-term GRF56_RS00215 PF01053 Cys/Met metabolism PLP-dependent enzyme GRF56_RS00235 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS00245 PF00005 ABC transporter GRF56_RS00245 PF08402 TOBE domain GRF56_RS00255 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS00270 PF07702 UTRA domain GRF56_RS00270 PF00392 Bacterial regulatory proteins, gntR family GRF56_RS00285 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS00285 PF08448 PAS fold GRF56_RS00300 PF13538 UvrD-like helicase C-terminal domain GRF56_RS00305 PF13361 UvrD-like helicase C-terminal domain GRF56_RS00305 PF00580 UvrD/REP helicase N-terminal domain GRF56_RS00305 PF12705 PD-(D/E)XK nuclease superfamily GRF56_RS00310 PF17946 RecC C-terminal domain GRF56_RS00315 PF07681 DoxX GRF56_RS00320 PF17954 Quercetinase C-terminal cupin domain GRF56_RS00320 PF02678 Pirin GRF56_RS00330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS00330 PF03466 LysR substrate binding domain GRF56_RS00340 PF00672 HAMP domain GRF56_RS00340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS00340 PF12729 Four helix bundle sensory module for signal transduction GRF56_RS00350 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS00350 PF00072 Response regulator receiver domain GRF56_RS00355 PF00672 HAMP domain GRF56_RS00355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS00355 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS00360 PF17151 Periplasmic sensor domain GRF56_RS00360 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS00365 PF00593 TonB dependent receptor GRF56_RS00365 PF07715 TonB-dependent Receptor Plug Domain GRF56_RS00405 PF01196 Ribosomal protein L17 GRF56_RS00410 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GRF56_RS00410 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GRF56_RS00410 PF01000 RNA polymerase Rpb3/RpoA insert domain GRF56_RS00415 PF01479 S4 domain GRF56_RS00415 PF00163 Ribosomal protein S4/S9 N-terminal domain GRF56_RS00420 PF00411 Ribosomal protein S11 GRF56_RS00425 PF00416 Ribosomal protein S13/S18 GRF56_RS00430 PF00444 Ribosomal protein L36 GRF56_RS00435 PF00344 SecY translocase GRF56_RS00440 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GRF56_RS00445 PF00327 Ribosomal protein L30p/L7e GRF56_RS00450 PF03719 Ribosomal protein S5, C-terminal domain GRF56_RS00450 PF00333 Ribosomal protein S5, N-terminal domain GRF56_RS00455 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GRF56_RS00460 PF00347 Ribosomal protein L6 GRF56_RS00465 PF00410 Ribosomal protein S8 GRF56_RS00470 PF00253 Ribosomal protein S14p/S29e GRF56_RS00475 PF00281 Ribosomal protein L5 GRF56_RS00475 PF00673 ribosomal L5P family C-terminus GRF56_RS00480 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GRF56_RS00480 PF00467 KOW motif GRF56_RS00485 PF00238 Ribosomal protein L14p/L23e GRF56_RS00490 PF00366 Ribosomal protein S17 GRF56_RS00495 PF00831 Ribosomal L29 protein GRF56_RS00500 PF00252 Ribosomal protein L16p/L10e GRF56_RS00505 PF07650 KH domain GRF56_RS00505 PF00189 Ribosomal protein S3, C-terminal domain GRF56_RS00510 PF00237 Ribosomal protein L22p/L17e GRF56_RS00515 PF00203 Ribosomal protein S19 GRF56_RS00520 PF03947 Ribosomal Proteins L2, C-terminal domain GRF56_RS00520 PF00181 Ribosomal Proteins L2, RNA binding domain GRF56_RS00525 PF00276 Ribosomal protein L23 GRF56_RS00530 PF00573 Ribosomal protein L4/L1 family GRF56_RS00535 PF00297 Ribosomal protein L3 GRF56_RS00540 PF00338 Ribosomal protein S10p/S20e GRF56_RS00550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS00550 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS00550 PF00672 HAMP domain GRF56_RS00555 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS00555 PF00072 Response regulator receiver domain GRF56_RS00560 PF03449 Transcription elongation factor, N-terminal GRF56_RS00560 PF01272 Transcription elongation factor, GreA/GreB, C-term GRF56_RS00565 PF00575 S1 RNA binding domain GRF56_RS00565 PF17674 HHH domain GRF56_RS00565 PF09371 Tex-like protein N-terminal domain GRF56_RS00565 PF16921 Tex protein YqgF-like domain GRF56_RS00585 PF00561 alpha/beta hydrolase fold GRF56_RS00590 PF00156 Phosphoribosyl transferase domain GRF56_RS00595 PF01521 Iron-sulphur cluster biosynthesis GRF56_RS00595 PF01106 NifU-like domain GRF56_RS00600 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GRF56_RS00600 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GRF56_RS00605 PF02556 Preprotein translocase subunit SecB GRF56_RS00610 PF00581 Rhodanese-like domain GRF56_RS00615 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GRF56_RS00615 PF01676 Metalloenzyme superfamily GRF56_RS00620 PF01551 Peptidase family M23 GRF56_RS00630 PF00356 Bacterial regulatory proteins, lacI family GRF56_RS00630 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GRF56_RS00645 PF01081 KDPG and KHG aldolase GRF56_RS00650 PF00920 Dehydratase family GRF56_RS00655 PF01202 Shikimate kinase GRF56_RS00660 PF02447 GntP family permease GRF56_RS00665 PF13091 PLD-like domain GRF56_RS00670 PF00270 DEAD/DEAH box helicase GRF56_RS00670 PF17191 RecG wedge domain GRF56_RS00670 PF00271 Helicase conserved C-terminal domain GRF56_RS00680 PF00583 Acetyltransferase (GNAT) family GRF56_RS00680 PF09500 Putative thioesterase (yiiD_Cterm) GRF56_RS00685 PF17284 Spermidine synthase tetramerisation domain GRF56_RS00690 PF02580 D-Tyr-tRNA(Tyr) deacylase GRF56_RS00695 PF03631 Virulence factor BrkB GRF56_RS00700 PF03949 Malic enzyme, NAD binding domain GRF56_RS00700 PF00390 Malic enzyme, N-terminal domain GRF56_RS00705 PF03222 Tryptophan/tyrosine permease family GRF56_RS00710 PF11066 Protein of unknown function (DUF2867) GRF56_RS00710 PF13460 NAD(P)H-binding GRF56_RS00720 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GRF56_RS00720 PF18074 Primosomal protein N C-terminal domain GRF56_RS00720 PF17764 3′ DNA-binding domain (3′BD) GRF56_RS00720 PF00271 Helicase conserved C-terminal domain GRF56_RS00720 PF00270 DEAD/DEAH box helicase GRF56_RS00725 PF01197 Ribosomal protein L31 GRF56_RS00735 PF00672 HAMP domain GRF56_RS00735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS00740 PF03737 Aldolase/RraA GRF56_RS00745 PF02592 Putative vitamin uptake transporter GRF56_RS00755 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GRF56_RS00760 PF00034 Cytochrome c GRF56_RS00765 PF09382 RQC domain GRF56_RS00765 PF16124 RecQ zinc-binding GRF56_RS00765 PF00570 HRDC domain GRF56_RS00765 PF00271 Helicase conserved C-terminal domain GRF56_RS00765 PF00270 DEAD/DEAH box helicase GRF56_RS00770 PF03061 Thioesterase superfamily GRF56_RS00785 PF03475 3-alpha domain GRF56_RS00785 PF03473 MOSC domain GRF56_RS00790 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS00795 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS00800 PF00005 ABC transporter GRF56_RS00800 PF08402 TOBE domain GRF56_RS00805 PF13416 Bacterial extracellular solute-binding protein GRF56_RS00810 PF13416 Bacterial extracellular solute-binding protein GRF56_RS00815 PF00202 Aminotransferase class-III GRF56_RS00820 PF00120 Glutamine synthetase, catalytic domain GRF56_RS00825 PF01258 Prokaryotic dksA/traR C4-type zinc finger GRF56_RS00840 PF05981 CreA protein GRF56_RS00845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GRF56_RS00845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GRF56_RS00850 PF00012 Hsp70 protein GRF56_RS00865 PF02903 Alpha amylase, N-terminal ig-like domain GRF56_RS00865 PF00128 Alpha amylase, catalytic domain GRF56_RS00880 PF05958 tRNA (Uracil-5-)-methyltransferase GRF56_RS00885 PF00672 HAMP domain GRF56_RS00885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS00885 PF02743 Cache domain GRF56_RS00890 PF02653 Branched-chain amino acid transport system / permease component GRF56_RS00895 PF00005 ABC transporter GRF56_RS00900 PF13407 Periplasmic binding protein domain GRF56_RS00905 PF02836 Glycosyl hydrolases family 2, TIM barrel domain GRF56_RS00905 PF16353 Domain of unknown function(DUF4981) GRF56_RS00905 PF00703 Glycosyl hydrolases family 2 GRF56_RS00905 PF02837 Glycosyl hydrolases family 2, sugar binding domain GRF56_RS00905 PF02929 Beta galactosidase small chain GRF56_RS00910 PF00356 Bacterial regulatory proteins, lacI family GRF56_RS00915 PF16363 GDP-mannose 4,6 dehydratase GRF56_RS00920 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GRF56_RS00920 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GRF56_RS00925 PF00288 GHMP kinases N terminal domain GRF56_RS00925 PF08544 GHMP kinases C terminal GRF56_RS00925 PF10509 Galactokinase galactose-binding signature GRF56_RS00930 PF01263 Aldose 1-epimerase GRF56_RS00935 PF02673 Bacitracin resistance protein BacA GRF56_RS00945 PF04542 Sigma-70 region 2 GRF56_RS00945 PF04545 Sigma-70, region 4 GRF56_RS00955 PF03485 Arginyl tRNA synthetase N terminal domain GRF56_RS00955 PF05746 DALR anticodon binding domain GRF56_RS00955 PF00750 tRNA synthetases class I (R) GRF56_RS00965 PF00227 Proteasome subunit GRF56_RS00970 PF07724 AAA domain (Cdc48 subfamily) GRF56_RS00970 PF10431 C-terminal, D2-small domain, of ClpB protein GRF56_RS00970 PF00004 ATPase family associated with various cellular activities (AAA) GRF56_RS00980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GRF56_RS00985 PF00005 ABC transporter GRF56_RS01000 PF04324 BFD-like [2Fe-2S] binding domain GRF56_RS01000 PF18267 Rubredoxin NAD+ reductase C-terminal domain GRF56_RS01000 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GRF56_RS01000 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GRF56_RS01000 PF07992 Pyridine nucleotide-disulphide oxidoreductase GRF56_RS01005 PF13806 Rieske-like [2Fe-2S] domain GRF56_RS01010 PF01226 Formate/nitrite transporter GRF56_RS01015 PF14824 Sirohaem biosynthesis protein central GRF56_RS01015 PF10414 Sirohaem synthase dimerisation region GRF56_RS01015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GRF56_RS01020 PF00571 CBS domain GRF56_RS01020 PF01769 Divalent cation transporter GRF56_RS01020 PF03448 MgtE intracellular N domain GRF56_RS01030 PF02872 5'-nucleotidase, C-terminal domain GRF56_RS01030 PF00149 Calcineurin-like phosphoesterase GRF56_RS01065 PF00580 UvrD/REP helicase N-terminal domain GRF56_RS01065 PF13361 UvrD-like helicase C-terminal domain GRF56_RS01070 PF01435 Peptidase family M48 GRF56_RS01095 PF14001 YdfZ protein GRF56_RS01125 PF01810 LysE type translocator GRF56_RS01130 PF12833 Helix-turn-helix domain GRF56_RS01130 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GRF56_RS01150 PF00535 Glycosyl transferase family 2 GRF56_RS01155 PF04932 O-Antigen ligase GRF56_RS01165 PF01370 NAD dependent epimerase/dehydratase family GRF56_RS01170 PF00440 Bacterial regulatory proteins, tetR family GRF56_RS01170 PF08360 QacR-like protein, C-terminal region GRF56_RS01175 PF00155 Aminotransferase class I and II GRF56_RS01180 PF00107 Zinc-binding dehydrogenase GRF56_RS01180 PF08240 Alcohol dehydrogenase GroES-like domain GRF56_RS01185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GRF56_RS01190 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS01190 PF00563 EAL domain GRF56_RS01190 PF03707 Bacterial signalling protein N terminal repeat GRF56_RS01195 PF00580 UvrD/REP helicase N-terminal domain GRF56_RS01195 PF13361 UvrD-like helicase C-terminal domain GRF56_RS01200 PF00266 Aminotransferase class-V GRF56_RS01205 PF02657 Fe-S metabolism associated domain GRF56_RS01210 PF00899 ThiF family GRF56_RS01240 PF01177 Asp/Glu/Hydantoin racemase GRF56_RS01245 PF00593 TonB dependent receptor GRF56_RS01245 PF07715 TonB-dependent Receptor Plug Domain GRF56_RS01250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS01250 PF03466 LysR substrate binding domain GRF56_RS01265 PF00731 AIR carboxylase GRF56_RS01270 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GRF56_RS01270 PF02222 ATP-grasp domain GRF56_RS01275 PF07690 Major Facilitator Superfamily GRF56_RS01280 PF00072 Response regulator receiver domain GRF56_RS01280 PF04397 LytTr DNA-binding domain GRF56_RS01285 PF07694 5TMR of 5TMR-LYT GRF56_RS01285 PF06580 Histidine kinase GRF56_RS01285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS01295 PF00210 Ferritin-like domain GRF56_RS01300 PF07055 Enoyl reductase FAD binding domain GRF56_RS01300 PF12241 Trans-2-enoyl-CoA reductase catalytic region GRF56_RS01300 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GRF56_RS01305 PF00582 Universal stress protein family GRF56_RS01310 PF00579 tRNA synthetases class I (W and Y) GRF56_RS01315 PF03466 LysR substrate binding domain GRF56_RS01315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS01335 PF00892 EamA-like transporter family GRF56_RS01350 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GRF56_RS01360 PF00625 Guanylate kinase GRF56_RS01365 PF01192 RNA polymerase Rpb6 GRF56_RS01370 PF13291 ACT domain GRF56_RS01370 PF04607 Region found in RelA / SpoT proteins GRF56_RS01370 PF02824 TGS domain GRF56_RS01375 PF12105 SpoU, rRNA methylase, C-terminal GRF56_RS01375 PF00588 SpoU rRNA Methylase family GRF56_RS01380 PF00132 Bacterial transferase hexapeptide (six repeats) GRF56_RS01385 PF12146 Serine aminopeptidase, S33 GRF56_RS01420 PF00440 Bacterial regulatory proteins, tetR family GRF56_RS01425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GRF56_RS01430 PF00873 AcrB/AcrD/AcrF family GRF56_RS01435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS01435 PF00497 Bacterial extracellular solute-binding proteins, family 3 GRF56_RS01435 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS01440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GRF56_RS01440 PF07992 Pyridine nucleotide-disulphide oxidoreductase GRF56_RS01450 PF03814 Potassium-transporting ATPase A subunit GRF56_RS01460 PF02669 K+-transporting ATPase, c chain GRF56_RS01465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS01465 PF13492 GAF domain GRF56_RS01465 PF13493 Domain of unknown function (DUF4118) GRF56_RS01465 PF02702 Osmosensitive K+ channel His kinase sensor domain GRF56_RS01465 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS01470 PF00072 Response regulator receiver domain GRF56_RS01470 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS01475 PF07690 Major Facilitator Superfamily GRF56_RS01490 PF00155 Aminotransferase class I and II GRF56_RS01495 PF00011 Hsp20/alpha crystallin family GRF56_RS01500 PF00011 Hsp20/alpha crystallin family GRF56_RS01510 PF01965 DJ-1/PfpI family GRF56_RS01510 PF12833 Helix-turn-helix domain GRF56_RS01515 PF00204 DNA gyrase B GRF56_RS01515 PF00986 DNA gyrase B subunit, carboxyl terminus GRF56_RS01515 PF18053 DNA gyrase B subunit insert domain GRF56_RS01515 PF01751 Toprim domain GRF56_RS01515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS01520 PF02463 RecF/RecN/SMC N terminal domain GRF56_RS01525 PF02767 DNA polymerase III beta subunit, central domain GRF56_RS01525 PF02768 DNA polymerase III beta subunit, C-terminal domain GRF56_RS01525 PF00712 DNA polymerase III beta subunit, N-terminal domain GRF56_RS01530 PF11638 DnaA N-terminal domain GRF56_RS01530 PF08299 Bacterial dnaA protein helix-turn-helix GRF56_RS01530 PF00308 Bacterial dnaA protein GRF56_RS01535 PF00497 Bacterial extracellular solute-binding proteins, family 3 GRF56_RS01540 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS01550 PF00468 Ribosomal protein L34 GRF56_RS01555 PF00825 Ribonuclease P GRF56_RS01560 PF01809 Putative membrane protein insertion efficiency factor GRF56_RS01565 PF14849 YidC periplasmic domain GRF56_RS01565 PF02096 60Kd inner membrane protein GRF56_RS01570 PF12631 MnmE helical domain GRF56_RS01570 PF10396 GTP-binding protein TrmE N-terminus GRF56_RS01570 PF01926 50S ribosome-binding GTPase GRF56_RS01575 PF02899 Phage integrase, N-terminal SAM-like domain GRF56_RS01575 PF00589 Phage integrase family GRF56_RS01590 PF13610 DDE domain GRF56_RS01600 PF02796 Helix-turn-helix domain of resolvase GRF56_RS01600 PF00239 Resolvase, N terminal domain GRF56_RS01610 PF07690 Major Facilitator Superfamily GRF56_RS01625 PF13610 DDE domain GRF56_RS01635 PF13700 Domain of unknown function (DUF4158) GRF56_RS01635 PF01526 Tn3 transposase DDE domain GRF56_RS01640 PF02796 Helix-turn-helix domain of resolvase GRF56_RS01640 PF00239 Resolvase, N terminal domain GRF56_RS01645 PF08447 PAS fold GRF56_RS01645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS01655 PF13610 DDE domain GRF56_RS01670 PF00440 Bacterial regulatory proteins, tetR family GRF56_RS01670 PF02909 Tetracyclin repressor-like, C-terminal domain GRF56_RS01675 PF07690 Major Facilitator Superfamily GRF56_RS01680 PF00892 EamA-like transporter family GRF56_RS01710 PF01420 Type I restriction modification DNA specificity domain GRF56_RS01715 PF12161 HsdM N-terminal domain GRF56_RS01715 PF02384 N-6 DNA Methylase GRF56_RS01720 PF00271 Helicase conserved C-terminal domain GRF56_RS01720 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) GRF56_RS01720 PF04851 Type III restriction enzyme, res subunit GRF56_RS01720 PF08463 EcoEI R protein C-terminal GRF56_RS01740 PF13657 HipA N-terminal domain GRF56_RS01740 PF07804 HipA-like C-terminal domain GRF56_RS01745 PF01032 FecCD transport family GRF56_RS01750 PF01497 Periplasmic binding protein GRF56_RS01755 PF00005 ABC transporter GRF56_RS01760 PF00005 ABC transporter GRF56_RS01765 PF07715 TonB-dependent Receptor Plug Domain GRF56_RS01765 PF00593 TonB dependent receptor GRF56_RS01770 PF00258 Flavodoxin GRF56_RS01775 PF01134 Glucose inhibited division protein A GRF56_RS01775 PF13932 GidA associated domain GRF56_RS01780 PF02527 rRNA small subunit methyltransferase G GRF56_RS01785 PF13614 AAA domain GRF56_RS01790 PF02195 ParB-like nuclease domain GRF56_RS01790 PF17762 HTH domain found in ParB protein GRF56_RS01800 PF00119 ATP synthase A chain GRF56_RS01805 PF00137 ATP synthase subunit C GRF56_RS01810 PF00430 ATP synthase B/B' CF(0) GRF56_RS01815 PF00213 ATP synthase delta (OSCP) subunit GRF56_RS01820 PF02874 ATP synthase alpha/beta family, beta-barrel domain GRF56_RS01820 PF00306 ATP synthase alpha/beta chain, C terminal domain GRF56_RS01820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GRF56_RS01825 PF00231 ATP synthase GRF56_RS01830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GRF56_RS01830 PF02874 ATP synthase alpha/beta family, beta-barrel domain GRF56_RS01835 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GRF56_RS01835 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GRF56_RS01840 PF12804 MobA-like NTP transferase domain GRF56_RS01840 PF14602 Hexapeptide repeat of succinyl-transferase GRF56_RS01840 PF00132 Bacterial transferase hexapeptide (six repeats) GRF56_RS01845 PF06123 Inner membrane protein CreD GRF56_RS01855 PF00905 Penicillin binding protein transpeptidase domain GRF56_RS01860 PF00672 HAMP domain GRF56_RS01860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS01860 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS01865 PF00072 Response regulator receiver domain GRF56_RS01865 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS01870 PF08220 DeoR-like helix-turn-helix domain GRF56_RS01870 PF00455 DeoR C terminal sensor domain GRF56_RS01875 PF01380 SIS domain GRF56_RS01880 PF03472 Autoinducer binding domain GRF56_RS01880 PF00196 Bacterial regulatory proteins, luxR family GRF56_RS01890 PF01618 MotA/TolQ/ExbB proton channel family GRF56_RS01895 PF01618 MotA/TolQ/ExbB proton channel family GRF56_RS01900 PF02472 Biopolymer transport protein ExbD/TolR GRF56_RS01905 PF03544 Gram-negative bacterial TonB protein C-terminal GRF56_RS01940 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GRF56_RS01945 PF07969 Amidohydrolase family GRF56_RS01950 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GRF56_RS01955 PF01209 ubiE/COQ5 methyltransferase family GRF56_RS01960 PF02036 SCP-2 sterol transfer family GRF56_RS01965 PF03109 ABC1 family GRF56_RS01970 PF02416 mttA/Hcf106 family GRF56_RS01975 PF02416 mttA/Hcf106 family GRF56_RS01980 PF00902 Sec-independent protein translocase protein (TatC) GRF56_RS01985 PF01026 TatD related DNase GRF56_RS01990 PF00490 Delta-aminolevulinic acid dehydratase GRF56_RS01995 PF12561 ToxR activated gene A lipoprotein domain GRF56_RS01995 PF00041 Fibronectin type III domain GRF56_RS02000 PF00704 Glycosyl hydrolases family 18 GRF56_RS02005 PF01432 Peptidase family M3 GRF56_RS02010 PF03707 Bacterial signalling protein N terminal repeat GRF56_RS02010 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS02010 PF00563 EAL domain GRF56_RS02015 PF04445 Putative SAM-dependent methyltransferase GRF56_RS02025 PF02541 Ppx/GppA phosphatase family GRF56_RS02030 PF00270 DEAD/DEAH box helicase GRF56_RS02030 PF00271 Helicase conserved C-terminal domain GRF56_RS02035 PF00085 Thioredoxin GRF56_RS02040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GRF56_RS02040 PF07498 Rho termination factor, N-terminal domain GRF56_RS02040 PF07497 Rho termination factor, RNA-binding domain GRF56_RS02050 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GRF56_RS02055 PF00175 Oxidoreductase NAD-binding domain GRF56_RS02065 PF08447 PAS fold GRF56_RS02065 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS02065 PF00563 EAL domain GRF56_RS02065 PF08448 PAS fold GRF56_RS02070 PF04380 Membrane fusogenic activity GRF56_RS02075 PF12262 Bacterial virulence factor lipase N-terminal GRF56_RS02080 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease GRF56_RS02080 PF01694 Rhomboid family GRF56_RS02085 PF00581 Rhodanese-like domain GRF56_RS02090 PF00005 ABC transporter GRF56_RS02095 PF12399 Branched-chain amino acid ATP-binding cassette transporter GRF56_RS02095 PF00005 ABC transporter GRF56_RS02100 PF02653 Branched-chain amino acid transport system / permease component GRF56_RS02100 PF11862 Domain of unknown function (DUF3382) GRF56_RS02105 PF02653 Branched-chain amino acid transport system / permease component GRF56_RS02110 PF13458 Periplasmic binding protein GRF56_RS02115 PF00356 Bacterial regulatory proteins, lacI family GRF56_RS02120 PF11975 Family 4 glycosyl hydrolase C-terminal domain GRF56_RS02120 PF02056 Family 4 glycosyl hydrolase GRF56_RS02125 PF00367 phosphotransferase system, EIIB GRF56_RS02125 PF02378 Phosphotransferase system, EIIC GRF56_RS02130 PF07702 UTRA domain GRF56_RS02130 PF00392 Bacterial regulatory proteins, gntR family GRF56_RS02135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS02135 PF00672 HAMP domain GRF56_RS02145 PF05932 Tir chaperone protein (CesT) family GRF56_RS02150 PF03545 Yersinia virulence determinant (YopE) GRF56_RS02150 PF03496 ADP-ribosyltransferase exoenzyme GRF56_RS02155 PF00563 EAL domain GRF56_RS02155 PF13426 PAS domain GRF56_RS02155 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS02170 PF05746 DALR anticodon binding domain GRF56_RS02170 PF02092 Glycyl-tRNA synthetase beta subunit GRF56_RS02175 PF02091 Glycyl-tRNA synthetase alpha subunit GRF56_RS02180 PF03352 Methyladenine glycosylase GRF56_RS02185 PF13488 Glycine zipper GRF56_RS02185 PF00691 OmpA family GRF56_RS02190 PF01042 Endoribonuclease L-PSP GRF56_RS02195 PF01206 Sulfurtransferase TusA GRF56_RS02205 PF01547 Bacterial extracellular solute-binding protein GRF56_RS02210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS02210 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS02210 PF00672 HAMP domain GRF56_RS02215 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS02215 PF00072 Response regulator receiver domain GRF56_RS02220 PF00108 Thiolase, N-terminal domain GRF56_RS02220 PF02803 Thiolase, C-terminal domain GRF56_RS02225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GRF56_RS02225 PF00378 Enoyl-CoA hydratase/isomerase GRF56_RS02225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GRF56_RS02230 PF00501 AMP-binding enzyme GRF56_RS02230 PF13193 AMP-binding enzyme C-terminal domain GRF56_RS02235 PF00557 Metallopeptidase family M24 GRF56_RS02240 PF01205 Uncharacterized protein family UPF0029 GRF56_RS02240 PF09186 Domain of unknown function (DUF1949) GRF56_RS02245 PF02386 Cation transport protein GRF56_RS02250 PF12724 Flavodoxin domain GRF56_RS02285 PF13607 Succinyl-CoA ligase like flavodoxin domain GRF56_RS02285 PF13380 CoA binding domain GRF56_RS02285 PF00583 Acetyltransferase (GNAT) family GRF56_RS02300 PF03466 LysR substrate binding domain GRF56_RS02300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS02305 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GRF56_RS02305 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GRF56_RS02310 PF00342 Phosphoglucose isomerase GRF56_RS02315 PF00924 Mechanosensitive ion channel GRF56_RS02315 PF05552 Conserved TM helix GRF56_RS02320 PF00440 Bacterial regulatory proteins, tetR family GRF56_RS02325 PF00692 dUTPase GRF56_RS02330 PF04127 DNA / pantothenate metabolism flavoprotein GRF56_RS02330 PF02441 Flavoprotein GRF56_RS02335 PF04002 RadC-like JAB domain GRF56_RS02340 PF00830 Ribosomal L28 family GRF56_RS02345 PF00471 Ribosomal protein L33 GRF56_RS02355 PF06827 Zinc finger found in FPG and IleRS GRF56_RS02355 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GRF56_RS02355 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GRF56_RS02360 PF04393 Protein of unknown function (DUF535) GRF56_RS02365 PF01467 Cytidylyltransferase-like GRF56_RS02370 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GRF56_RS02375 PF00535 Glycosyl transferase family 2 GRF56_RS02380 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GRF56_RS02385 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GRF56_RS02390 PF03611 PTS system sugar-specific permease component GRF56_RS02400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GRF56_RS02405 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GRF56_RS02405 PF00356 Bacterial regulatory proteins, lacI family GRF56_RS02410 PF08240 Alcohol dehydrogenase GroES-like domain GRF56_RS02410 PF00107 Zinc-binding dehydrogenase GRF56_RS02440 PF04345 Chorismate lyase GRF56_RS02445 PF01040 UbiA prenyltransferase family GRF56_RS02450 PF01553 Acyltransferase GRF56_RS02455 PF01726 LexA DNA binding domain GRF56_RS02455 PF00717 Peptidase S24-like GRF56_RS02465 PF02630 SCO1/SenC GRF56_RS02470 PF01554 MatE GRF56_RS02475 PF00588 SpoU rRNA Methylase family GRF56_RS02480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS02480 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS02480 PF16527 Two-component sensor protein CpxA, periplasmic domain GRF56_RS02480 PF00672 HAMP domain GRF56_RS02485 PF00072 Response regulator receiver domain GRF56_RS02485 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS02490 PF01545 Cation efflux family GRF56_RS02490 PF16916 Dimerisation domain of Zinc Transporter GRF56_RS02495 PF06426 Serine acetyltransferase, N-terminal GRF56_RS02495 PF00132 Bacterial transferase hexapeptide (six repeats) GRF56_RS02505 PF06005 Cell division protein ZapB GRF56_RS02515 PF00476 DNA polymerase family A GRF56_RS02515 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GRF56_RS02515 PF01367 5'-3' exonuclease, C-terminal SAM fold GRF56_RS02515 PF01612 3'-5' exonuclease GRF56_RS02520 PF00132 Bacterial transferase hexapeptide (six repeats) GRF56_RS02555 PF00356 Bacterial regulatory proteins, lacI family GRF56_RS02560 PF02929 Beta galactosidase small chain GRF56_RS02560 PF02837 Glycosyl hydrolases family 2, sugar binding domain GRF56_RS02560 PF02836 Glycosyl hydrolases family 2, TIM barrel domain GRF56_RS02560 PF00703 Glycosyl hydrolases family 2 GRF56_RS02560 PF16353 Domain of unknown function(DUF4981) GRF56_RS02565 PF04074 YhcH/YjgK/YiaL GRF56_RS02570 PF13520 Amino acid permease GRF56_RS02575 PF01588 Putative tRNA binding domain GRF56_RS02580 PF13520 Amino acid permease GRF56_RS02585 PF13593 SBF-like CPA transporter family (DUF4137) GRF56_RS02590 PF03781 Sulfatase-modifying factor enzyme 1 GRF56_RS02590 PF12867 DinB superfamily GRF56_RS02600 PF00756 Putative esterase GRF56_RS02605 PF00107 Zinc-binding dehydrogenase GRF56_RS02605 PF08240 Alcohol dehydrogenase GroES-like domain GRF56_RS02610 PF03466 LysR substrate binding domain GRF56_RS02610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS02615 PF08340 Domain of unknown function (DUF1732) GRF56_RS02615 PF03755 YicC-like family, N-terminal region GRF56_RS02620 PF01138 3' exoribonuclease family, domain 1 GRF56_RS02620 PF03725 3' exoribonuclease family, domain 2 GRF56_RS02625 PF00156 Phosphoribosyl transferase domain GRF56_RS02630 PF00403 Heavy-metal-associated domain GRF56_RS02635 PF13411 MerR HTH family regulatory protein GRF56_RS02640 PF01590 GAF domain GRF56_RS02640 PF00563 EAL domain GRF56_RS02640 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS02640 PF00360 Phytochrome region GRF56_RS02645 PF06288 Protein of unknown function (DUF1040) GRF56_RS02650 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase GRF56_RS02650 PF12801 4Fe-4S binding domain GRF56_RS02650 PF13746 4Fe-4S dicluster domain GRF56_RS02655 PF01636 Phosphotransferase enzyme family GRF56_RS02660 PF01323 DSBA-like thioredoxin domain GRF56_RS02665 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GRF56_RS02665 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GRF56_RS02670 PF00857 Isochorismatase family GRF56_RS02680 PF04463 Protein of unknown function (DUF523) GRF56_RS02685 PF01553 Acyltransferase GRF56_RS02690 PF01553 Acyltransferase GRF56_RS02695 PF13335 Magnesium chelatase, subunit ChlI C-terminal GRF56_RS02695 PF01078 Magnesium chelatase, subunit ChlI GRF56_RS02705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GRF56_RS02705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GRF56_RS02705 PF00205 Thiamine pyrophosphate enzyme, central domain GRF56_RS02715 PF01063 Amino-transferase class IV GRF56_RS02720 PF00920 Dehydratase family GRF56_RS02725 PF00585 C-terminal regulatory domain of Threonine dehydratase GRF56_RS02725 PF00291 Pyridoxal-phosphate dependent enzyme GRF56_RS02735 PF00440 Bacterial regulatory proteins, tetR family GRF56_RS02740 PF00691 OmpA family GRF56_RS02740 PF01389 OmpA-like transmembrane domain GRF56_RS02745 PF04143 Sulphur transport GRF56_RS02750 PF12729 Four helix bundle sensory module for signal transduction GRF56_RS02750 PF00672 HAMP domain GRF56_RS02750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS02755 PF00892 EamA-like transporter family GRF56_RS02765 PF00171 Aldehyde dehydrogenase family GRF56_RS02770 PF07883 Cupin domain GRF56_RS02770 PF01381 Helix-turn-helix GRF56_RS02775 PF00202 Aminotransferase class-III GRF56_RS02780 PF00171 Aldehyde dehydrogenase family GRF56_RS02785 PF00117 Glutamine amidotransferase class-I GRF56_RS02785 PF00958 GMP synthase C terminal domain GRF56_RS02785 PF02540 NAD synthase GRF56_RS02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS02790 PF03466 LysR substrate binding domain GRF56_RS02795 PF00294 pfkB family carbohydrate kinase GRF56_RS02800 PF02082 Transcriptional regulator GRF56_RS02815 PF02646 RmuC family GRF56_RS02820 PF00962 Adenosine/AMP deaminase GRF56_RS02825 PF00072 Response regulator receiver domain GRF56_RS02825 PF02954 Bacterial regulatory protein, Fis family GRF56_RS02825 PF00158 Sigma-54 interaction domain GRF56_RS02830 PF00989 PAS fold GRF56_RS02830 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS02830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS02840 PF00120 Glutamine synthetase, catalytic domain GRF56_RS02840 PF03951 Glutamine synthetase, beta-Grasp domain GRF56_RS02850 PF02386 Cation transport protein GRF56_RS02855 PF02080 TrkA-C domain GRF56_RS02855 PF02254 TrkA-N domain GRF56_RS02860 PF01189 16S rRNA methyltransferase RsmB/F GRF56_RS02860 PF01029 NusB family GRF56_RS02865 PF00551 Formyl transferase GRF56_RS02865 PF02911 Formyl transferase, C-terminal domain GRF56_RS02870 PF01327 Polypeptide deformylase GRF56_RS02875 PF01476 LysM domain GRF56_RS02880 PF17782 DprA winged helix domain GRF56_RS02880 PF02481 DNA recombination-mediator protein A GRF56_RS02885 PF04361 Protein of unknown function (DUF494) GRF56_RS02890 PF01396 Topoisomerase DNA binding C4 zinc finger GRF56_RS02895 PF00731 AIR carboxylase GRF56_RS02900 PF01300 Telomere recombination GRF56_RS02905 PF01218 Coproporphyrinogen III oxidase GRF56_RS02910 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GRF56_RS02910 PF01488 Shikimate / quinate 5-dehydrogenase GRF56_RS02910 PF08501 Shikimate dehydrogenase substrate binding domain GRF56_RS02920 PF01926 50S ribosome-binding GTPase GRF56_RS02925 PF00034 Cytochrome c GRF56_RS02930 PF04220 Der GTPase activator (YihI) GRF56_RS02935 PF10675 Protein of unknown function (DUF2489) GRF56_RS02940 PF04055 Radical SAM superfamily GRF56_RS02940 PF06969 HemN C-terminal domain GRF56_RS02960 PF00696 Amino acid kinase family GRF56_RS02965 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GRF56_RS02965 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GRF56_RS02970 PF03606 C4-dicarboxylate anaerobic carrier GRF56_RS02975 PF02863 Arginine repressor, C-terminal domain GRF56_RS02975 PF01316 Arginine repressor, DNA binding domain GRF56_RS02980 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain GRF56_RS02980 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain GRF56_RS02985 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GRF56_RS02985 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GRF56_RS03005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS03005 PF03466 LysR substrate binding domain GRF56_RS03015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS03015 PF02743 Cache domain GRF56_RS03015 PF00672 HAMP domain GRF56_RS03020 PF08212 Lipocalin-like domain GRF56_RS03025 PF12833 Helix-turn-helix domain GRF56_RS03025 PF06719 AraC-type transcriptional regulator N-terminus GRF56_RS03030 PF00465 Iron-containing alcohol dehydrogenase GRF56_RS03035 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GRF56_RS03035 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GRF56_RS03035 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GRF56_RS03040 PF02233 NAD(P) transhydrogenase beta subunit GRF56_RS03050 PF08348 YheO-like PAS domain GRF56_RS03050 PF13309 HTH domain GRF56_RS03055 PF03313 Serine dehydratase alpha chain GRF56_RS03060 PF00375 Sodium:dicarboxylate symporter family GRF56_RS03065 PF07992 Pyridine nucleotide-disulphide oxidoreductase GRF56_RS03065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GRF56_RS03070 PF13525 Outer membrane lipoprotein GRF56_RS03075 PF01479 S4 domain GRF56_RS03075 PF00849 RNA pseudouridylate synthase GRF56_RS03085 PF02861 Clp amino terminal domain, pathogenicity island component GRF56_RS03085 PF10431 C-terminal, D2-small domain, of ClpB protein GRF56_RS03085 PF07724 AAA domain (Cdc48 subfamily) GRF56_RS03085 PF00004 ATPase family associated with various cellular activities (AAA) GRF56_RS03085 PF17871 AAA lid domain GRF56_RS03095 PF03590 Aspartate-ammonia ligase GRF56_RS03100 PF01037 Lrp/AsnC ligand binding domain GRF56_RS03110 PF10063 Uncharacterized integral membrane protein (DUF2301) GRF56_RS03115 PF00571 CBS domain GRF56_RS03115 PF00478 IMP dehydrogenase / GMP reductase domain GRF56_RS03135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS03135 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS03145 PF00072 Response regulator receiver domain GRF56_RS03145 PF00158 Sigma-54 interaction domain GRF56_RS03150 PF06496 Protein of unknown function (DUF1097) GRF56_RS03160 PF00174 Oxidoreductase molybdopterin binding domain GRF56_RS03165 PF01794 Ferric reductase like transmembrane component GRF56_RS03180 PF00072 Response regulator receiver domain GRF56_RS03180 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS03185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS03185 PF08918 PhoQ Sensor GRF56_RS03195 PF00384 Molybdopterin oxidoreductase GRF56_RS03195 PF01568 Molydopterin dinucleotide binding domain GRF56_RS03195 PF18364 Molybdopterin oxidoreductase N-terminal domain GRF56_RS03200 PF03264 NapC/NirT cytochrome c family, N-terminal region GRF56_RS03205 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS03205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS03205 PF00497 Bacterial extracellular solute-binding proteins, family 3 GRF56_RS03215 PF01751 Toprim domain GRF56_RS03215 PF01131 DNA topoisomerase GRF56_RS03235 PF02386 Cation transport protein GRF56_RS03240 PF02254 TrkA-N domain GRF56_RS03240 PF02080 TrkA-C domain GRF56_RS03245 PF01565 FAD binding domain GRF56_RS03245 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GRF56_RS03250 PF08279 HTH domain GRF56_RS03250 PF03099 Biotin/lipoate A/B protein ligase family GRF56_RS03250 PF02237 Biotin protein ligase C terminal domain GRF56_RS03255 PF00485 Phosphoribulokinase / Uridine kinase family GRF56_RS03270 PF00009 Elongation factor Tu GTP binding domain GRF56_RS03270 PF03144 Elongation factor Tu domain 2 GRF56_RS03270 PF03143 Elongation factor Tu C-terminal domain GRF56_RS03280 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GRF56_RS03285 PF00467 KOW motif GRF56_RS03285 PF02357 Transcription termination factor nusG GRF56_RS03290 PF03946 Ribosomal protein L11, N-terminal domain GRF56_RS03290 PF00298 Ribosomal protein L11, RNA binding domain GRF56_RS03295 PF00687 Ribosomal protein L1p/L10e family GRF56_RS03300 PF00466 Ribosomal protein L10 GRF56_RS03305 PF16320 Ribosomal protein L7/L12 dimerisation domain GRF56_RS03305 PF00542 Ribosomal protein L7/L12 C-terminal domain GRF56_RS03310 PF04561 RNA polymerase Rpb2, domain 2 GRF56_RS03310 PF04563 RNA polymerase beta subunit GRF56_RS03310 PF00562 RNA polymerase Rpb2, domain 6 GRF56_RS03310 PF04560 RNA polymerase Rpb2, domain 7 GRF56_RS03310 PF04565 RNA polymerase Rpb2, domain 3 GRF56_RS03310 PF10385 RNA polymerase beta subunit external 1 domain GRF56_RS03315 PF00623 RNA polymerase Rpb1, domain 2 GRF56_RS03315 PF04997 RNA polymerase Rpb1, domain 1 GRF56_RS03315 PF04983 RNA polymerase Rpb1, domain 3 GRF56_RS03315 PF05000 RNA polymerase Rpb1, domain 4 GRF56_RS03315 PF04998 RNA polymerase Rpb1, domain 5 GRF56_RS03320 PF13309 HTH domain GRF56_RS03320 PF08348 YheO-like PAS domain GRF56_RS03325 PF01042 Endoribonuclease L-PSP GRF56_RS03330 PF02635 DsrE/DsrF-like family GRF56_RS03335 PF02635 DsrE/DsrF-like family GRF56_RS03340 PF04077 DsrH like protein GRF56_RS03345 PF00164 Ribosomal protein S12/S23 GRF56_RS03350 PF00177 Ribosomal protein S7p/S5e GRF56_RS03355 PF00679 Elongation factor G C-terminus GRF56_RS03355 PF03144 Elongation factor Tu domain 2 GRF56_RS03355 PF00009 Elongation factor Tu GTP binding domain GRF56_RS03355 PF03764 Elongation factor G, domain IV GRF56_RS03355 PF14492 Elongation Factor G, domain II GRF56_RS03360 PF03144 Elongation factor Tu domain 2 GRF56_RS03360 PF00009 Elongation factor Tu GTP binding domain GRF56_RS03360 PF03143 Elongation factor Tu C-terminal domain GRF56_RS03400 PF00440 Bacterial regulatory proteins, tetR family GRF56_RS03415 PF07947 YhhN family GRF56_RS03420 PF07690 Major Facilitator Superfamily GRF56_RS03425 PF13533 Biotin-lipoyl like GRF56_RS03430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS03430 PF03466 LysR substrate binding domain GRF56_RS03440 PF00375 Sodium:dicarboxylate symporter family GRF56_RS03445 PF10678 Protein of unknown function (DUF2492) GRF56_RS03450 PF01914 MarC family integral membrane protein GRF56_RS03455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS03455 PF03466 LysR substrate binding domain GRF56_RS03460 PF02416 mttA/Hcf106 family GRF56_RS03470 PF00497 Bacterial extracellular solute-binding proteins, family 3 GRF56_RS03470 PF01464 Transglycosylase SLT domain GRF56_RS03475 PF13091 PLD-like domain GRF56_RS03490 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GRF56_RS03490 PF00326 Prolyl oligopeptidase family GRF56_RS03505 PF00106 short chain dehydrogenase GRF56_RS03510 PF03466 LysR substrate binding domain GRF56_RS03510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS03515 PF02525 Flavodoxin-like fold GRF56_RS03520 PF00999 Sodium/hydrogen exchanger family GRF56_RS03520 PF02254 TrkA-N domain GRF56_RS03545 PF00448 SRP54-type protein, GTPase domain GRF56_RS03545 PF02881 SRP54-type protein, helical bundle domain GRF56_RS03550 PF00005 ABC transporter GRF56_RS03555 PF18075 FtsX extracellular domain GRF56_RS03560 PF00140 Sigma-70 factor, region 1.2 GRF56_RS03560 PF04542 Sigma-70 region 2 GRF56_RS03560 PF04545 Sigma-70, region 4 GRF56_RS03565 PF00484 Carbonic anhydrase GRF56_RS03570 PF00392 Bacterial regulatory proteins, gntR family GRF56_RS03570 PF07702 UTRA domain GRF56_RS03575 PF01979 Amidohydrolase family GRF56_RS03580 PF00491 Arginase family GRF56_RS03585 PF01175 Urocanase Rossmann-like domain GRF56_RS03585 PF17391 Urocanase N-terminal domain GRF56_RS03585 PF17392 Urocanase C-terminal domain GRF56_RS03590 PF00221 Aromatic amino acid lyase GRF56_RS03595 PF01699 Sodium/calcium exchanger protein GRF56_RS03600 PF12792 CSS motif domain associated with EAL GRF56_RS03600 PF00563 EAL domain GRF56_RS03605 PF17157 Gammaproteobacterial periplasmic sensor domain GRF56_RS03605 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS03605 PF00563 EAL domain GRF56_RS03635 PF00263 Bacterial type II and III secretion system protein GRF56_RS03635 PF03958 Bacterial type II/III secretion system short domain GRF56_RS03650 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GRF56_RS03650 PF00437 Type II/IV secretion system protein GRF56_RS03655 PF00482 Type II secretion system (T2SS), protein F GRF56_RS03670 PF00114 Pilin (bacterial filament) GRF56_RS03670 PF07963 Prokaryotic N-terminal methylation motif GRF56_RS03675 PF07963 Prokaryotic N-terminal methylation motif GRF56_RS03675 PF14245 Type IV pilin PilA GRF56_RS03705 PF04085 rod shape-determining protein MreC GRF56_RS03710 PF04093 rod shape-determining protein MreD GRF56_RS03715 PF02545 Maf-like protein GRF56_RS03720 PF00575 S1 RNA binding domain GRF56_RS03720 PF10150 Ribonuclease E/G family GRF56_RS03725 PF13116 Protein of unknown function GRF56_RS03725 PF13502 AsmA-like C-terminal region GRF56_RS03735 PF00795 Carbon-nitrogen hydrolase GRF56_RS03740 PF01523 Putative modulator of DNA gyrase GRF56_RS03750 PF01914 MarC family integral membrane protein GRF56_RS03755 PF07690 Major Facilitator Superfamily GRF56_RS03765 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) GRF56_RS03790 PF00999 Sodium/hydrogen exchanger family GRF56_RS03795 PF02965 Vitamin B12 dependent methionine synthase, activation domain GRF56_RS03795 PF02574 Homocysteine S-methyltransferase GRF56_RS03795 PF02607 B12 binding domain GRF56_RS03795 PF00809 Pterin binding enzyme GRF56_RS03795 PF02310 B12 binding domain GRF56_RS03800 PF18030 RimK PreATP-grasp domain GRF56_RS03800 PF08443 RimK-like ATP-grasp domain GRF56_RS03810 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS03810 PF00072 Response regulator receiver domain GRF56_RS03825 PF03440 Aerolysin/Pertussis toxin (APT) domain GRF56_RS03825 PF01117 Aerolysin toxin GRF56_RS03830 PF01964 Radical SAM ThiC family GRF56_RS03830 PF13667 ThiC-associated domain GRF56_RS03835 PF02581 Thiamine monophosphate synthase GRF56_RS03840 PF00899 ThiF family GRF56_RS03850 PF05690 Thiazole biosynthesis protein ThiG GRF56_RS03855 PF06968 Biotin and Thiamin Synthesis associated domain GRF56_RS03855 PF04055 Radical SAM superfamily GRF56_RS03875 PF00132 Bacterial transferase hexapeptide (six repeats) GRF56_RS03885 PF17151 Periplasmic sensor domain GRF56_RS03885 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS03895 PF14698 Argininosuccinate lyase C-terminal GRF56_RS03895 PF00206 Lyase GRF56_RS03900 PF00764 Arginosuccinate synthase GRF56_RS03905 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GRF56_RS03905 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GRF56_RS03910 PF00696 Amino acid kinase family GRF56_RS03915 PF02774 Semialdehyde dehydrogenase, dimerisation domain GRF56_RS03915 PF01118 Semialdehyde dehydrogenase, NAD binding domain GRF56_RS03920 PF07687 Peptidase dimerisation domain GRF56_RS03920 PF01546 Peptidase family M20/M25/M40 GRF56_RS03925 PF00311 Phosphoenolpyruvate carboxylase GRF56_RS03935 PF04073 Aminoacyl-tRNA editing domain GRF56_RS03955 PF03466 LysR substrate binding domain GRF56_RS03955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS03960 PF03788 LrgA family GRF56_RS03965 PF04172 LrgB-like family GRF56_RS03975 PF01734 Patatin-like phospholipase GRF56_RS03980 PF00488 MutS domain V GRF56_RS03980 PF05192 MutS domain III GRF56_RS03980 PF05188 MutS domain II GRF56_RS03980 PF01624 MutS domain I GRF56_RS03980 PF05190 MutS family domain IV GRF56_RS03985 PF02464 Competence-damaged protein GRF56_RS03990 PF00154 recA bacterial DNA recombination protein GRF56_RS03995 PF02631 RecX family GRF56_RS04000 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GRF56_RS04000 PF01411 tRNA synthetases class II (A) GRF56_RS04000 PF02272 DHHA1 domain GRF56_RS04005 PF13840 ACT domain GRF56_RS04005 PF01842 ACT domain GRF56_RS04005 PF00696 Amino acid kinase family GRF56_RS04010 PF02599 Global regulator protein family GRF56_RS04045 PF00768 D-alanyl-D-alanine carboxypeptidase GRF56_RS04050 PF09335 SNARE associated Golgi protein GRF56_RS04055 PF01595 Cyclin M transmembrane N-terminal domain GRF56_RS04055 PF00571 CBS domain GRF56_RS04055 PF03471 Transporter associated domain GRF56_RS04065 PF00710 Asparaginase, N-terminal GRF56_RS04065 PF17763 Glutaminase/Asparaginase C-terminal domain GRF56_RS04080 PF00356 Bacterial regulatory proteins, lacI family GRF56_RS04085 PF02378 Phosphotransferase system, EIIC GRF56_RS04085 PF00367 phosphotransferase system, EIIB GRF56_RS04090 PF00128 Alpha amylase, catalytic domain GRF56_RS04090 PF11941 Domain of unknown function (DUF3459) GRF56_RS04095 PF12464 Maltose acetyltransferase GRF56_RS04095 PF14602 Hexapeptide repeat of succinyl-transferase GRF56_RS04105 PF00849 RNA pseudouridylate synthase GRF56_RS04110 PF12137 RNA polymerase recycling family C-terminal GRF56_RS04110 PF18337 RapA N-terminal Tudor like domain GRF56_RS04110 PF00176 SNF2 family N-terminal domain GRF56_RS04110 PF18339 RapA N-terminal Tudor like domain 1 GRF56_RS04110 PF00271 Helicase conserved C-terminal domain GRF56_RS04135 PF13356 Arm DNA-binding domain GRF56_RS04135 PF00589 Phage integrase family GRF56_RS04140 PF00665 Integrase core domain GRF56_RS04145 PF01695 IstB-like ATP binding protein GRF56_RS04150 PF11999 Protein of unknown function (DUF3494) GRF56_RS04150 PF02368 Bacterial Ig-like domain (group 2) GRF56_RS04155 PF00563 EAL domain GRF56_RS04155 PF12792 CSS motif domain associated with EAL GRF56_RS04160 PF00816 H-NS histone family GRF56_RS04175 PF13148 Protein of unknown function (DUF3987) GRF56_RS04230 PF04002 RadC-like JAB domain GRF56_RS04270 PF00392 Bacterial regulatory proteins, gntR family GRF56_RS04270 PF07702 UTRA domain GRF56_RS04275 PF03747 ADP-ribosylglycohydrolase GRF56_RS04285 PF00294 pfkB family carbohydrate kinase GRF56_RS04295 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A GRF56_RS04315 PF02810 SEC-C motif GRF56_RS04315 PF03695 Uncharacterised protein family (UPF0149) GRF56_RS04325 PF13462 Thioredoxin GRF56_RS04325 PF06965 Na+/H+ antiporter 1 GRF56_RS04340 PF00202 Aminotransferase class-III GRF56_RS04345 PF00654 Voltage gated chloride channel GRF56_RS04355 PF01521 Iron-sulphur cluster biosynthesis GRF56_RS04360 PF03553 Na+/H+ antiporter family GRF56_RS04400 PF00534 Glycosyl transferases group 1 GRF56_RS04400 PF08323 Starch synthase catalytic domain GRF56_RS04405 PF00483 Nucleotidyl transferase GRF56_RS04410 PF05175 Methyltransferase small domain GRF56_RS04410 PF08468 Methyltransferase small domain N-terminal GRF56_RS04415 PF00701 Dihydrodipicolinate synthetase family GRF56_RS04430 PF01865 Protein of unknown function DUF47 GRF56_RS04435 PF01384 Phosphate transporter family GRF56_RS04440 PF03447 Homoserine dehydrogenase, NAD binding domain GRF56_RS04440 PF00742 Homoserine dehydrogenase GRF56_RS04440 PF00696 Amino acid kinase family GRF56_RS04445 PF01053 Cys/Met metabolism PLP-dependent enzyme GRF56_RS04450 PF01340 Met Apo-repressor, MetJ GRF56_RS04455 PF12833 Helix-turn-helix domain GRF56_RS04455 PF02311 AraC-like ligand binding domain GRF56_RS04460 PF01588 Putative tRNA binding domain GRF56_RS04465 PF03222 Tryptophan/tyrosine permease family GRF56_RS04470 PF00459 Inositol monophosphatase family GRF56_RS04475 PF00293 NUDIX domain GRF56_RS04480 PF13419 Haloacid dehalogenase-like hydrolase GRF56_RS04495 PF14602 Hexapeptide repeat of succinyl-transferase GRF56_RS04495 PF12464 Maltose acetyltransferase GRF56_RS04500 PF13194 Domain of unknown function (DUF4010) GRF56_RS04515 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS04520 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS04525 PF12857 TOBE-like domain GRF56_RS04525 PF00005 ABC transporter GRF56_RS04530 PF03466 LysR substrate binding domain GRF56_RS04530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS04535 PF00291 Pyridoxal-phosphate dependent enzyme GRF56_RS04540 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS04545 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS04550 PF00005 ABC transporter GRF56_RS04555 PF00497 Bacterial extracellular solute-binding proteins, family 3 GRF56_RS04560 PF18416 N-acetylglucosamine binding protein domain 2 GRF56_RS04560 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GRF56_RS04565 PF12729 Four helix bundle sensory module for signal transduction GRF56_RS04565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS04565 PF00672 HAMP domain GRF56_RS04580 PF00175 Oxidoreductase NAD-binding domain GRF56_RS04580 PF00111 2Fe-2S iron-sulfur cluster binding domain GRF56_RS04580 PF00970 Oxidoreductase FAD-binding domain GRF56_RS04605 PF11230 Protein of unknown function (DUF3029) GRF56_RS04610 PF04055 Radical SAM superfamily GRF56_RS04620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS04620 PF03466 LysR substrate binding domain GRF56_RS04625 PF00155 Aminotransferase class I and II GRF56_RS04630 PF02583 Metal-sensitive transcriptional repressor GRF56_RS04645 PF03714 Bacterial pullanase-associated domain GRF56_RS04645 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GRF56_RS04645 PF17967 Pullulanase N2 domain GRF56_RS04645 PF11852 Domain of unknown function (DUF3372) GRF56_RS04645 PF18494 Pullulanase Ins domain GRF56_RS04650 PF00403 Heavy-metal-associated domain GRF56_RS04655 PF08534 Redoxin GRF56_RS04665 PF00271 Helicase conserved C-terminal domain GRF56_RS04665 PF00270 DEAD/DEAH box helicase GRF56_RS04675 PF03372 Endonuclease/Exonuclease/phosphatase family GRF56_RS04695 PF06062 Uncharacterised protein family (UPF0231) GRF56_RS04700 PF17853 GGDEF-like domain GRF56_RS04700 PF05651 Putative sugar diacid recognition GRF56_RS04700 PF13556 PucR C-terminal helix-turn-helix domain GRF56_RS04705 PF02447 GntP family permease GRF56_RS04710 PF02595 Glycerate kinase family GRF56_RS04720 PF00255 Glutathione peroxidase GRF56_RS04725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS04725 PF03466 LysR substrate binding domain GRF56_RS04730 PF07670 Nucleoside recognition GRF56_RS04730 PF07662 Na+ dependent nucleoside transporter C-terminus GRF56_RS04730 PF01773 Na+ dependent nucleoside transporter N-terminus GRF56_RS04740 PF02594 Uncharacterised ACR, YggU family COG1872 GRF56_RS04745 PF02325 YGGT family GRF56_RS04750 PF03807 NADP oxidoreductase coenzyme F420-dependent GRF56_RS04750 PF14748 Pyrroline-5-carboxylate reductase dimerisation GRF56_RS04755 PF01168 Alanine racemase, N-terminal domain GRF56_RS04760 PF00437 Type II/IV secretion system protein GRF56_RS04765 PF00437 Type II/IV secretion system protein GRF56_RS04770 PF03883 Peroxide stress protein YaaA GRF56_RS04780 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GRF56_RS04780 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GRF56_RS04785 PF00472 RF-1 domain GRF56_RS04790 PF00543 Nitrogen regulatory protein P-II GRF56_RS04795 PF13416 Bacterial extracellular solute-binding protein GRF56_RS04805 PF00005 ABC transporter GRF56_RS04805 PF08402 TOBE domain GRF56_RS04810 PF04261 Dyp-type peroxidase family GRF56_RS04815 PF02863 Arginine repressor, C-terminal domain GRF56_RS04815 PF01316 Arginine repressor, DNA binding domain GRF56_RS04820 PF00005 ABC transporter GRF56_RS04825 PF00497 Bacterial extracellular solute-binding proteins, family 3 GRF56_RS04830 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS04835 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS04840 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GRF56_RS04840 PF00056 lactate/malate dehydrogenase, NAD binding domain GRF56_RS04845 PF08238 Sel1 repeat GRF56_RS04850 PF00970 Oxidoreductase FAD-binding domain GRF56_RS04850 PF00042 Globin GRF56_RS04850 PF00175 Oxidoreductase NAD-binding domain GRF56_RS04855 PF02082 Transcriptional regulator GRF56_RS04860 PF00571 CBS domain GRF56_RS04860 PF01595 Cyclin M transmembrane N-terminal domain GRF56_RS04860 PF03471 Transporter associated domain GRF56_RS04865 PF01578 Cytochrome C assembly protein GRF56_RS04870 PF02978 Signal peptide binding domain GRF56_RS04870 PF02881 SRP54-type protein, helical bundle domain GRF56_RS04870 PF00448 SRP54-type protein, GTPase domain GRF56_RS04875 PF00886 Ribosomal protein S16 GRF56_RS04880 PF01782 RimM N-terminal domain GRF56_RS04880 PF05239 PRC-barrel domain GRF56_RS04885 PF01746 tRNA (Guanine-1)-methyltransferase GRF56_RS04890 PF01245 Ribosomal protein L19 GRF56_RS04905 PF02976 DNA mismatch repair enzyme MutH GRF56_RS04910 PF00293 NUDIX domain GRF56_RS04915 PF01590 GAF domain GRF56_RS04915 PF05524 PEP-utilising enzyme, N-terminal GRF56_RS04915 PF00391 PEP-utilising enzyme, mobile domain GRF56_RS04915 PF02896 PEP-utilising enzyme, TIM barrel domain GRF56_RS04920 PF01790 Prolipoprotein diacylglyceryl transferase GRF56_RS04925 PF00303 Thymidylate synthase GRF56_RS04930 PF06965 Na+/H+ antiporter 1 GRF56_RS04940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS04940 PF03466 LysR substrate binding domain GRF56_RS04945 PF01022 Bacterial regulatory protein, arsR family GRF56_RS04950 PF01649 Ribosomal protein S20 GRF56_RS04955 PF03023 Lipid II flippase MurJ GRF56_RS04960 PF06574 FAD synthetase GRF56_RS04960 PF01687 Riboflavin kinase GRF56_RS04965 PF00133 tRNA synthetases class I (I, L, M and V) GRF56_RS04965 PF08264 Anticodon-binding domain of tRNA GRF56_RS04965 PF06827 Zinc finger found in FPG and IleRS GRF56_RS04970 PF01252 Signal peptidase (SPase) II GRF56_RS04975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GRF56_RS04980 PF02401 LytB protein GRF56_RS05005 PF05567 Neisseria PilC beta-propeller domain GRF56_RS05040 PF00795 Carbon-nitrogen hydrolase GRF56_RS05040 PF02540 NAD synthase GRF56_RS05045 PF00543 Nitrogen regulatory protein P-II GRF56_RS05055 PF02664 S-Ribosylhomocysteinase (LuxS) GRF56_RS05065 PF07963 Prokaryotic N-terminal methylation motif GRF56_RS05065 PF00114 Pilin (bacterial filament) GRF56_RS05070 PF01026 TatD related DNase GRF56_RS05075 PF01773 Na+ dependent nucleoside transporter N-terminus GRF56_RS05075 PF07662 Na+ dependent nucleoside transporter C-terminus GRF56_RS05075 PF07670 Nucleoside recognition GRF56_RS05085 PF01791 DeoC/LacD family aldolase GRF56_RS05090 PF00591 Glycosyl transferase family, a/b domain GRF56_RS05090 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GRF56_RS05090 PF02885 Glycosyl transferase family, helical bundle domain GRF56_RS05095 PF01676 Metalloenzyme superfamily GRF56_RS05100 PF01048 Phosphorylase superfamily GRF56_RS05110 PF18429 Domain of unknown function (DUF5609) GRF56_RS05125 PF18073 Rubredoxin metal binding domain GRF56_RS05130 PF07238 PilZ domain GRF56_RS05135 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GRF56_RS05140 PF00216 Bacterial DNA-binding protein GRF56_RS05150 PF01411 tRNA synthetases class II (A) GRF56_RS05150 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GRF56_RS05150 PF02272 DHHA1 domain GRF56_RS05155 PF01566 Natural resistance-associated macrophage protein GRF56_RS05160 PF01250 Ribosomal protein S6 GRF56_RS05165 PF01084 Ribosomal protein S18 GRF56_RS05170 PF03948 Ribosomal protein L9, C-terminal domain GRF56_RS05170 PF01281 Ribosomal protein L9, N-terminal domain GRF56_RS05175 PF00970 Oxidoreductase FAD-binding domain GRF56_RS05175 PF00175 Oxidoreductase NAD-binding domain GRF56_RS05200 PF08240 Alcohol dehydrogenase GroES-like domain GRF56_RS05200 PF00107 Zinc-binding dehydrogenase GRF56_RS05205 PF09335 SNARE associated Golgi protein GRF56_RS05210 PF05193 Peptidase M16 inactive domain GRF56_RS05210 PF00675 Insulinase (Peptidase family M16) GRF56_RS05215 PF04262 Glutamate-cysteine ligase GRF56_RS05220 PF00501 AMP-binding enzyme GRF56_RS05230 PF13673 Acetyltransferase (GNAT) domain GRF56_RS05230 PF00583 Acetyltransferase (GNAT) family GRF56_RS05240 PF07728 AAA domain (dynein-related subfamily) GRF56_RS05240 PF12592 Protein of unknown function (DUF3763) GRF56_RS05240 PF17868 AAA lid domain GRF56_RS05245 PF05762 VWA domain containing CoxE-like protein GRF56_RS05250 PF00072 Response regulator receiver domain GRF56_RS05250 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS05260 PF00009 Elongation factor Tu GTP binding domain GRF56_RS05260 PF03144 Elongation factor Tu domain 2 GRF56_RS05260 PF16658 Class II release factor RF3, C-terminal domain GRF56_RS05265 PF00583 Acetyltransferase (GNAT) family GRF56_RS05280 PF07690 Major Facilitator Superfamily GRF56_RS05285 PF03466 LysR substrate binding domain GRF56_RS05285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS05290 PF04151 Bacterial pre-peptidase C-terminal domain GRF56_RS05290 PF02868 Thermolysin metallopeptidase, alpha-helical domain GRF56_RS05290 PF01447 Thermolysin metallopeptidase, catalytic domain GRF56_RS05290 PF03413 Peptidase propeptide and YPEB domain GRF56_RS05290 PF07504 Fungalysin/Thermolysin Propeptide Motif GRF56_RS05295 PF13302 Acetyltransferase (GNAT) domain GRF56_RS05300 PF13302 Acetyltransferase (GNAT) domain GRF56_RS05310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GRF56_RS05310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GRF56_RS05315 PF07690 Major Facilitator Superfamily GRF56_RS05320 PF01725 Ham1 family GRF56_RS05325 PF04055 Radical SAM superfamily GRF56_RS05325 PF06969 HemN C-terminal domain GRF56_RS05330 PF03889 Alternative ribosome-rescue factor A GRF56_RS05335 PF13411 MerR HTH family regulatory protein GRF56_RS05340 PF01808 AICARFT/IMPCHase bienzyme GRF56_RS05340 PF02142 MGS-like domain GRF56_RS05345 PF02844 Phosphoribosylglycinamide synthetase, N domain GRF56_RS05345 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GRF56_RS05345 PF02843 Phosphoribosylglycinamide synthetase, C domain GRF56_RS05365 PF04542 Sigma-70 region 2 GRF56_RS05365 PF04545 Sigma-70, region 4 GRF56_RS05365 PF04546 Sigma-70, non-essential region GRF56_RS05365 PF03979 Sigma-70 factor, region 1.1 GRF56_RS05365 PF04539 Sigma-70 region 3 GRF56_RS05365 PF00140 Sigma-70 factor, region 1.2 GRF56_RS05370 PF01807 CHC2 zinc finger GRF56_RS05370 PF08275 DNA primase catalytic core, N-terminal domain GRF56_RS05370 PF08278 DNA primase DnaG DnaB-binding GRF56_RS05370 PF10410 DnaB-helicase binding domain of primase GRF56_RS05375 PF09424 Yqey-like protein GRF56_RS05380 PF01165 Ribosomal protein S21 GRF56_RS05385 PF00814 Glycoprotease family GRF56_RS05395 PF03605 Anaerobic c4-dicarboxylate membrane transporter GRF56_RS05400 PF00206 Lyase GRF56_RS05400 PF10415 Fumarase C C-terminus GRF56_RS05405 PF04186 FxsA cytoplasmic membrane protein GRF56_RS05415 PF00166 Chaperonin 10 Kd subunit GRF56_RS05420 PF00118 TCP-1/cpn60 chaperonin family GRF56_RS05430 PF03707 Bacterial signalling protein N terminal repeat GRF56_RS05430 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS05430 PF00563 EAL domain GRF56_RS05460 PF02867 Ribonucleotide reductase, barrel domain GRF56_RS05460 PF08343 Ribonucleotide reductase N-terminal GRF56_RS05460 PF00317 Ribonucleotide reductase, all-alpha domain GRF56_RS05470 PF02562 PhoH-like protein GRF56_RS05470 PF13638 PIN domain GRF56_RS05475 PF00005 ABC transporter GRF56_RS05480 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS05500 PF00694 Aconitase C-terminal domain GRF56_RS05505 PF00330 Aconitase family (aconitate hydratase) GRF56_RS05510 PF00180 Isocitrate/isopropylmalate dehydrogenase GRF56_RS05515 PF08502 LeuA allosteric (dimerisation) domain GRF56_RS05515 PF00682 HMGL-like GRF56_RS05525 PF01569 PAP2 superfamily GRF56_RS05540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GRF56_RS05540 PF00205 Thiamine pyrophosphate enzyme, central domain GRF56_RS05540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GRF56_RS05550 PF10369 Small subunit of acetolactate synthase GRF56_RS05555 PF01810 LysE type translocator GRF56_RS05560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS05560 PF03466 LysR substrate binding domain GRF56_RS05565 PF01546 Peptidase family M20/M25/M40 GRF56_RS05585 PF02954 Bacterial regulatory protein, Fis family GRF56_RS05590 PF01207 Dihydrouridine synthase (Dus) GRF56_RS05595 PF02321 Outer membrane efflux protein GRF56_RS05600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GRF56_RS05630 PF00072 Response regulator receiver domain GRF56_RS05635 PF00854 POT family GRF56_RS05640 PF00483 Nucleotidyl transferase GRF56_RS05650 PF01515 Phosphate acetyl/butaryl transferase GRF56_RS05650 PF07085 DRTGG domain GRF56_RS05655 PF00871 Acetokinase family GRF56_RS05660 PF04217 Protein of unknown function, DUF412 GRF56_RS05665 PF03887 YfbU domain GRF56_RS05670 PF00578 AhpC/TSA family GRF56_RS05675 PF01842 ACT domain GRF56_RS05680 PF00701 Dihydrodipicolinate synthetase family GRF56_RS05685 PF06804 NlpB/DapX lipoprotein GRF56_RS05690 PF01259 SAICAR synthetase GRF56_RS05700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS05700 PF03466 LysR substrate binding domain GRF56_RS05705 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GRF56_RS05725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS05725 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS05725 PF18415 Histidine kinase receptor ArcB trans-membrane domain GRF56_RS05725 PF01627 Hpt domain GRF56_RS05725 PF00072 Response regulator receiver domain GRF56_RS05725 PF00989 PAS fold GRF56_RS05730 PF01966 HD domain GRF56_RS05730 PF13286 Phosphohydrolase-associated domain GRF56_RS05740 PF00072 Response regulator receiver domain GRF56_RS05740 PF09456 RcsC Alpha-Beta-Loop (ABL) GRF56_RS05740 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS05740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS05745 PF03707 Bacterial signalling protein N terminal repeat GRF56_RS05745 PF00563 EAL domain GRF56_RS05745 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS05750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS05750 PF00672 HAMP domain GRF56_RS05750 PF12729 Four helix bundle sensory module for signal transduction GRF56_RS05755 PF02357 Transcription termination factor nusG GRF56_RS05760 PF03180 NLPA lipoprotein GRF56_RS05765 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS05770 PF09383 NIL domain GRF56_RS05770 PF00005 ABC transporter GRF56_RS05780 PF00480 ROK family GRF56_RS05785 PF08331 Domain of unknown function (DUF1730) GRF56_RS05790 PF03853 YjeF-related protein N-terminus GRF56_RS05790 PF01256 Carbohydrate kinase GRF56_RS05795 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GRF56_RS05800 PF01520 N-acetylmuramoyl-L-alanine amidase GRF56_RS05810 PF08676 MutL C terminal dimerisation domain GRF56_RS05810 PF01119 DNA mismatch repair protein, C-terminal domain GRF56_RS05820 PF17209 Hfq protein GRF56_RS05825 PF01926 50S ribosome-binding GTPase GRF56_RS05825 PF16360 GTP-binding GTPase Middle Region GRF56_RS05825 PF13167 GTP-binding GTPase N-terminal GRF56_RS05830 PF12221 Bacterial membrane protein N terminal GRF56_RS05830 PF01145 SPFH domain / Band 7 family GRF56_RS05835 PF01145 SPFH domain / Band 7 family GRF56_RS05840 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) GRF56_RS05845 PF00348 Polyprenyl synthetase GRF56_RS05850 PF00829 Ribosomal prokaryotic L21 protein GRF56_RS05855 PF01016 Ribosomal L27 protein GRF56_RS05860 PF01018 GTP1/OBG GRF56_RS05860 PF01926 50S ribosome-binding GTPase GRF56_RS05875 PF00296 Luciferase-like monooxygenase GRF56_RS05890 PF00149 Calcineurin-like phosphoesterase GRF56_RS05895 PF04379 ApaG domain GRF56_RS05900 PF00398 Ribosomal RNA adenine dimethylase GRF56_RS05905 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GRF56_RS05910 PF00639 PPIC-type PPIASE domain GRF56_RS05910 PF09312 SurA N-terminal domain GRF56_RS05915 PF04453 LPS transport system D GRF56_RS05915 PF03968 OstA-like protein GRF56_RS05920 PF01636 Phosphotransferase enzyme family GRF56_RS05925 PF00483 Nucleotidyl transferase GRF56_RS05930 PF00226 DnaJ domain GRF56_RS05930 PF05099 Tellurite resistance protein TerB GRF56_RS05935 PF07687 Peptidase dimerisation domain GRF56_RS05935 PF01546 Peptidase family M20/M25/M40 GRF56_RS05945 PF00156 Phosphoribosyl transferase domain GRF56_RS05955 PF07417 Sigma factor-binding transcriptional regulator Crl GRF56_RS05960 PF01472 PUA domain GRF56_RS05960 PF00696 Amino acid kinase family GRF56_RS05965 PF00171 Aldehyde dehydrogenase family GRF56_RS05980 PF09905 DNA-binding protein VF530 GRF56_RS05985 PF02666 Phosphatidylserine decarboxylase GRF56_RS05990 PF03193 RsgA GTPase GRF56_RS05995 PF00929 Exonuclease GRF56_RS06035 PF00313 'Cold-shock' DNA-binding domain GRF56_RS06045 PF00672 HAMP domain GRF56_RS06045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS06050 PF00749 tRNA synthetases class I (E and Q), catalytic domain GRF56_RS06055 PF00860 Permease family GRF56_RS06065 PF00005 ABC transporter GRF56_RS06065 PF12848 ABC transporter GRF56_RS06080 PF01464 Transglycosylase SLT domain GRF56_RS06090 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) GRF56_RS06095 PF01370 NAD dependent epimerase/dehydratase family GRF56_RS06100 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GRF56_RS06100 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GRF56_RS06100 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GRF56_RS06110 PF00005 ABC transporter GRF56_RS06110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GRF56_RS06115 PF00005 ABC transporter GRF56_RS06115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GRF56_RS06125 PF12911 N-terminal TM domain of oligopeptide transport permease C GRF56_RS06125 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS06130 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS06135 PF07715 TonB-dependent Receptor Plug Domain GRF56_RS06135 PF00593 TonB dependent receptor GRF56_RS06145 PF01618 MotA/TolQ/ExbB proton channel family GRF56_RS06150 PF01618 MotA/TolQ/ExbB proton channel family GRF56_RS06155 PF02472 Biopolymer transport protein ExbD/TolR GRF56_RS06170 PF03734 L,D-transpeptidase catalytic domain GRF56_RS06170 PF17969 L,D-transpeptidase C-terminal domain GRF56_RS06175 PF01343 Peptidase family S49 GRF56_RS06180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GRF56_RS06180 PF07992 Pyridine nucleotide-disulphide oxidoreductase GRF56_RS06185 PF00881 Nitroreductase family GRF56_RS06195 PF12464 Maltose acetyltransferase GRF56_RS06195 PF14602 Hexapeptide repeat of succinyl-transferase GRF56_RS06200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GRF56_RS06200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GRF56_RS06210 PF08240 Alcohol dehydrogenase GroES-like domain GRF56_RS06210 PF00107 Zinc-binding dehydrogenase GRF56_RS06215 PF03466 LysR substrate binding domain GRF56_RS06215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS06220 PF00367 phosphotransferase system, EIIB GRF56_RS06220 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GRF56_RS06220 PF02378 Phosphotransferase system, EIIC GRF56_RS06225 PF00474 Sodium:solute symporter family GRF56_RS06235 PF02785 Biotin carboxylase C-terminal domain GRF56_RS06235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GRF56_RS06235 PF00289 Biotin carboxylase, N-terminal domain GRF56_RS06240 PF00364 Biotin-requiring enzyme GRF56_RS06245 PF01220 Dehydroquinase class II GRF56_RS06250 PF16177 Acetyl-coenzyme A synthetase N-terminus GRF56_RS06250 PF00501 AMP-binding enzyme GRF56_RS06250 PF13193 AMP-binding enzyme C-terminal domain GRF56_RS06260 PF00563 EAL domain GRF56_RS06260 PF03707 Bacterial signalling protein N terminal repeat GRF56_RS06260 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS06270 PF02613 Nitrate reductase delta subunit GRF56_RS06275 PF01568 Molydopterin dinucleotide binding domain GRF56_RS06275 PF00384 Molybdopterin oxidoreductase GRF56_RS06275 PF18364 Molybdopterin oxidoreductase N-terminal domain GRF56_RS06280 PF03264 NapC/NirT cytochrome c family, N-terminal region GRF56_RS06285 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS06285 PF00072 Response regulator receiver domain GRF56_RS06295 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GRF56_RS06310 PF00464 Serine hydroxymethyltransferase GRF56_RS06315 PF03477 ATP cone domain GRF56_RS06320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GRF56_RS06320 PF01872 RibD C-terminal domain GRF56_RS06325 PF00677 Lumazine binding domain GRF56_RS06330 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GRF56_RS06330 PF00925 GTP cyclohydrolase II GRF56_RS06335 PF00885 6,7-dimethyl-8-ribityllumazine synthase GRF56_RS06340 PF01029 NusB family GRF56_RS06345 PF00586 AIR synthase related protein, N-terminal domain GRF56_RS06345 PF02769 AIR synthase related protein, C-terminal domain GRF56_RS06350 PF04608 Phosphatidylglycerophosphatase A GRF56_RS06355 PF00005 ABC transporter GRF56_RS06355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GRF56_RS06360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GRF56_RS06370 PF12911 N-terminal TM domain of oligopeptide transport permease C GRF56_RS06370 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS06375 PF04102 SlyX GRF56_RS06385 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GRF56_RS06385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GRF56_RS06390 PF02954 Bacterial regulatory protein, Fis family GRF56_RS06390 PF00072 Response regulator receiver domain GRF56_RS06390 PF00158 Sigma-54 interaction domain GRF56_RS06410 PF02872 5'-nucleotidase, C-terminal domain GRF56_RS06410 PF00149 Calcineurin-like phosphoesterase GRF56_RS06415 PF02780 Transketolase, C-terminal domain GRF56_RS06415 PF02779 Transketolase, pyrimidine binding domain GRF56_RS06415 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GRF56_RS06420 PF00348 Polyprenyl synthetase GRF56_RS06425 PF02609 Exonuclease VII small subunit GRF56_RS06430 PF01618 MotA/TolQ/ExbB proton channel family GRF56_RS06435 PF00691 OmpA family GRF56_RS06435 PF13677 Membrane MotB of proton-channel complex MotA/MotB GRF56_RS06440 PF03449 Transcription elongation factor, N-terminal GRF56_RS06440 PF01272 Transcription elongation factor, GreA/GreB, C-term GRF56_RS06450 PF01985 CRS1 / YhbY (CRM) domain GRF56_RS06455 PF01728 FtsJ-like methyltransferase GRF56_RS06460 PF01434 Peptidase family M41 GRF56_RS06460 PF17862 AAA+ lid domain GRF56_RS06460 PF00004 ATPase family associated with various cellular activities (AAA) GRF56_RS06460 PF06480 FtsH Extracellular GRF56_RS06465 PF00809 Pterin binding enzyme GRF56_RS06470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GRF56_RS06470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GRF56_RS06470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GRF56_RS06470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GRF56_RS06475 PF00121 Triosephosphate isomerase GRF56_RS06480 PF03840 Preprotein translocase SecG subunit GRF56_RS06495 PF17384 RimP C-terminal SH3 domain GRF56_RS06495 PF02576 RimP N-terminal domain GRF56_RS06500 PF00575 S1 RNA binding domain GRF56_RS06500 PF08529 NusA N-terminal domain GRF56_RS06500 PF13184 NusA-like KH domain GRF56_RS06505 PF04760 Translation initiation factor IF-2, N-terminal region GRF56_RS06505 PF08364 Bacterial translation initiation factor IF-2 associated region GRF56_RS06505 PF11987 Translation-initiation factor 2 GRF56_RS06505 PF00009 Elongation factor Tu GTP binding domain GRF56_RS06510 PF02033 Ribosome-binding factor A GRF56_RS06515 PF01509 TruB family pseudouridylate synthase (N terminal domain) GRF56_RS06515 PF16198 tRNA pseudouridylate synthase B C-terminal domain GRF56_RS06515 PF09157 Pseudouridine synthase II TruB, C-terminal GRF56_RS06520 PF00312 Ribosomal protein S15 GRF56_RS06525 PF03725 3' exoribonuclease family, domain 2 GRF56_RS06525 PF00575 S1 RNA binding domain GRF56_RS06525 PF00013 KH domain GRF56_RS06525 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GRF56_RS06525 PF01138 3' exoribonuclease family, domain 1 GRF56_RS06530 PF00072 Response regulator receiver domain GRF56_RS06530 PF01339 CheB methylesterase GRF56_RS06535 PF03975 CheD chemotactic sensory transduction GRF56_RS06540 PF01739 CheR methyltransferase, SAM binding domain GRF56_RS06540 PF03705 CheR methyltransferase, all-alpha domain GRF56_RS06545 PF00672 HAMP domain GRF56_RS06545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS06550 PF01584 CheW-like domain GRF56_RS06555 PF12729 Four helix bundle sensory module for signal transduction GRF56_RS06555 PF00672 HAMP domain GRF56_RS06555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS06560 PF01627 Hpt domain GRF56_RS06560 PF01584 CheW-like domain GRF56_RS06560 PF07194 P2 response regulator binding domain GRF56_RS06560 PF02895 Signal transducing histidine kinase, homodimeric domain GRF56_RS06560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS06575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS06575 PF00672 HAMP domain GRF56_RS06575 PF02743 Cache domain GRF56_RS06585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS06585 PF03466 LysR substrate binding domain GRF56_RS06590 PF01810 LysE type translocator GRF56_RS06595 PF12392 Collagenase GRF56_RS06595 PF01136 Peptidase family U32 GRF56_RS06600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GRF56_RS06600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GRF56_RS06605 PF02805 Metal binding domain of Ada GRF56_RS06605 PF00730 HhH-GPD superfamily base excision DNA repair protein GRF56_RS06605 PF12833 Helix-turn-helix domain GRF56_RS06605 PF06029 AlkA N-terminal domain GRF56_RS06610 PF07963 Prokaryotic N-terminal methylation motif GRF56_RS06610 PF00114 Pilin (bacterial filament) GRF56_RS06640 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GRF56_RS06665 PF00106 short chain dehydrogenase GRF56_RS06670 PF03573 outer membrane porin, OprD family GRF56_RS06675 PF16591 Helical bimodular sensor domain GRF56_RS06675 PF00672 HAMP domain GRF56_RS06675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS06710 PF00288 GHMP kinases N terminal domain GRF56_RS06710 PF08544 GHMP kinases C terminal GRF56_RS06710 PF10509 Galactokinase galactose-binding signature GRF56_RS06715 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GRF56_RS06715 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GRF56_RS06720 PF16363 GDP-mannose 4,6 dehydratase GRF56_RS06725 PF00356 Bacterial regulatory proteins, lacI family GRF56_RS06730 PF02264 LamB porin GRF56_RS06735 PF07745 Glycosyl hydrolase family 53 GRF56_RS06745 PF02743 Cache domain GRF56_RS06745 PF00672 HAMP domain GRF56_RS06745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS06750 PF00005 ABC transporter GRF56_RS06750 PF17912 MalK OB fold domain GRF56_RS06755 PF13416 Bacterial extracellular solute-binding protein GRF56_RS06760 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS06765 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS06770 PF07745 Glycosyl hydrolase family 53 GRF56_RS06775 PF08533 Beta-galactosidase C-terminal domain GRF56_RS06775 PF02449 Beta-galactosidase GRF56_RS06775 PF08532 Beta-galactosidase trimerisation domain GRF56_RS06780 PF02378 Phosphotransferase system, EIIC GRF56_RS06780 PF00367 phosphotransferase system, EIIB GRF56_RS06785 PF07745 Glycosyl hydrolase family 53 GRF56_RS06790 PF02887 Pyruvate kinase, alpha/beta domain GRF56_RS06790 PF00224 Pyruvate kinase, barrel domain GRF56_RS06805 PF04002 RadC-like JAB domain GRF56_RS06850 PF09588 YqaJ-like viral recombinase domain GRF56_RS06880 PF00800 Prephenate dehydratase GRF56_RS06880 PF01817 Chorismate mutase type II GRF56_RS06895 PF06508 Queuosine biosynthesis protein QueC GRF56_RS06910 PF08349 Protein of unknown function (DUF1722) GRF56_RS06915 PF13411 MerR HTH family regulatory protein GRF56_RS06920 PF00875 DNA photolyase GRF56_RS06920 PF03441 FAD binding domain of DNA photolyase GRF56_RS06930 PF00106 short chain dehydrogenase GRF56_RS06975 PF02424 ApbE family GRF56_RS06980 PF00175 Oxidoreductase NAD-binding domain GRF56_RS06980 PF00111 2Fe-2S iron-sulfur cluster binding domain GRF56_RS06980 PF00970 Oxidoreductase FAD-binding domain GRF56_RS06985 PF02508 Rnf-Nqr subunit, membrane protein GRF56_RS06990 PF02508 Rnf-Nqr subunit, membrane protein GRF56_RS06995 PF04205 FMN-binding domain GRF56_RS07000 PF03116 NQR2, RnfD, RnfE family GRF56_RS07005 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) GRF56_RS07005 PF11973 NQRA C-terminal domain GRF56_RS07010 PF01722 BolA-like protein GRF56_RS07015 PF05175 Methyltransferase small domain GRF56_RS07025 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GRF56_RS07030 PF07690 Major Facilitator Superfamily GRF56_RS07035 PF03502 Nucleoside-specific channel-forming protein, Tsx GRF56_RS07040 PF04461 Protein of unknown function (DUF520) GRF56_RS07045 PF08546 Ketopantoate reductase PanE/ApbA C terminal GRF56_RS07045 PF02558 Ketopantoate reductase PanE/ApbA GRF56_RS07050 PF01965 DJ-1/PfpI family GRF56_RS07060 PF11798 IMS family HHH motif GRF56_RS07060 PF11799 impB/mucB/samB family C-terminal domain GRF56_RS07060 PF00817 impB/mucB/samB family GRF56_RS07065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS07065 PF00672 HAMP domain GRF56_RS07070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS07070 PF03466 LysR substrate binding domain GRF56_RS07080 PF04241 Protein of unknown function (DUF423) GRF56_RS07085 PF18125 RlmM ferredoxin-like domain GRF56_RS07085 PF01728 FtsJ-like methyltransferase GRF56_RS07095 PF00180 Isocitrate/isopropylmalate dehydrogenase GRF56_RS07095 PF18324 Hypothetical protein TT1725 GRF56_RS07100 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GRF56_RS07100 PF01367 5'-3' exonuclease, C-terminal SAM fold GRF56_RS07105 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases GRF56_RS07105 PF11892 Domain of unknown function (DUF3412) GRF56_RS07105 PF03641 Possible lysine decarboxylase GRF56_RS07110 PF17158 Membrane-associated sensor, integral membrane domain GRF56_RS07110 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS07120 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GRF56_RS07120 PF14489 QueF-like protein GRF56_RS07125 PF07348 Syd protein (SUKH-2) GRF56_RS07130 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) GRF56_RS07155 PF04287 tRNA pseudouridine synthase C GRF56_RS07160 PF00849 RNA pseudouridylate synthase GRF56_RS07165 PF00258 Flavodoxin GRF56_RS07170 PF02264 LamB porin GRF56_RS07175 PF07148 Maltose operon periplasmic protein precursor (MalM) GRF56_RS07180 PF00367 phosphotransferase system, EIIB GRF56_RS07180 PF02378 Phosphotransferase system, EIIC GRF56_RS07185 PF11944 Protein of unknown function (DUF3461) GRF56_RS07190 PF14602 Hexapeptide repeat of succinyl-transferase GRF56_RS07190 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GRF56_RS07190 PF00132 Bacterial transferase hexapeptide (six repeats) GRF56_RS07195 PF01909 Nucleotidyltransferase domain GRF56_RS07195 PF08335 GlnD PII-uridylyltransferase GRF56_RS07195 PF01842 ACT domain GRF56_RS07195 PF01966 HD domain GRF56_RS07200 PF00557 Metallopeptidase family M24 GRF56_RS07205 PF00318 Ribosomal protein S2 GRF56_RS07210 PF00889 Elongation factor TS GRF56_RS07215 PF00696 Amino acid kinase family GRF56_RS07220 PF01765 Ribosome recycling factor GRF56_RS07225 PF01255 Putative undecaprenyl diphosphate synthase GRF56_RS07235 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GRF56_RS07235 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GRF56_RS07235 PF13288 DXP reductoisomerase C-terminal domain GRF56_RS07240 PF17820 PDZ domain GRF56_RS07240 PF02163 Peptidase family M50 GRF56_RS07245 PF07244 Surface antigen variable number repeat GRF56_RS07245 PF01103 Surface antigen GRF56_RS07250 PF03938 Outer membrane protein (OmpH-like) GRF56_RS07255 PF00132 Bacterial transferase hexapeptide (six repeats) GRF56_RS07255 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GRF56_RS07260 PF07977 FabA-like domain GRF56_RS07265 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GRF56_RS07265 PF00132 Bacterial transferase hexapeptide (six repeats) GRF56_RS07270 PF02684 Lipid-A-disaccharide synthetase GRF56_RS07275 PF01351 Ribonuclease HII GRF56_RS07280 PF02811 PHP domain GRF56_RS07280 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GRF56_RS07280 PF01336 OB-fold nucleic acid binding domain GRF56_RS07280 PF14579 Helix-hairpin-helix motif GRF56_RS07280 PF07733 Bacterial DNA polymerase III alpha NTPase domain GRF56_RS07285 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GRF56_RS07295 PF00923 Transaldolase/Fructose-6-phosphate aldolase GRF56_RS07300 PF01235 Sodium:alanine symporter family GRF56_RS07305 PF11992 Domain of unknown function (DUF3488) GRF56_RS07305 PF13559 Domain of unknown function (DUF4129) GRF56_RS07305 PF01841 Transglutaminase-like superfamily GRF56_RS07315 PF17863 AAA lid domain GRF56_RS07315 PF07726 ATPase family associated with various cellular activities (AAA) GRF56_RS07320 PF07690 Major Facilitator Superfamily GRF56_RS07325 PF03466 LysR substrate binding domain GRF56_RS07325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS07330 PF00854 POT family GRF56_RS07335 PF03652 Holliday junction resolvase GRF56_RS07340 PF02622 Uncharacterized ACR, COG1678 GRF56_RS07345 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GRF56_RS07345 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GRF56_RS07350 PF04452 RNA methyltransferase GRF56_RS07355 PF04231 Endonuclease I GRF56_RS07360 PF17283 SprT-like zinc ribbon domain GRF56_RS07360 PF10263 SprT-like family GRF56_RS07365 PF02772 S-adenosylmethionine synthetase, central domain GRF56_RS07365 PF00438 S-adenosylmethionine synthetase, N-terminal domain GRF56_RS07365 PF02773 S-adenosylmethionine synthetase, C-terminal domain GRF56_RS07370 PF02780 Transketolase, C-terminal domain GRF56_RS07370 PF02779 Transketolase, pyrimidine binding domain GRF56_RS07370 PF00456 Transketolase, thiamine diphosphate binding domain GRF56_RS07385 PF08240 Alcohol dehydrogenase GroES-like domain GRF56_RS07385 PF00109 Beta-ketoacyl synthase, N-terminal domain GRF56_RS07385 PF08659 KR domain GRF56_RS07385 PF00550 Phosphopantetheine attachment site GRF56_RS07385 PF14765 Polyketide synthase dehydratase GRF56_RS07385 PF00698 Acyl transferase domain GRF56_RS07385 PF16197 Ketoacyl-synthetase C-terminal extension GRF56_RS07385 PF02801 Beta-ketoacyl synthase, C-terminal domain GRF56_RS07390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS07390 PF03466 LysR substrate binding domain GRF56_RS07395 PF01965 DJ-1/PfpI family GRF56_RS07405 PF01042 Endoribonuclease L-PSP GRF56_RS07415 PF03702 Anhydro-N-acetylmuramic acid kinase GRF56_RS07420 PF01476 LysM domain GRF56_RS07420 PF08525 Opacity-associated protein A N-terminal motif GRF56_RS07420 PF01551 Peptidase family M23 GRF56_RS07425 PF00579 tRNA synthetases class I (W and Y) GRF56_RS07430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS07430 PF03466 LysR substrate binding domain GRF56_RS07435 PF03306 Alpha-acetolactate decarboxylase GRF56_RS07440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GRF56_RS07440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GRF56_RS07440 PF00205 Thiamine pyrophosphate enzyme, central domain GRF56_RS07450 PF03466 LysR substrate binding domain GRF56_RS07450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS07465 PF12706 Beta-lactamase superfamily domain GRF56_RS07470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS07470 PF03466 LysR substrate binding domain GRF56_RS07475 PF13520 Amino acid permease GRF56_RS07480 PF18500 CadC C-terminal domain 1 GRF56_RS07480 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS07485 PF13520 Amino acid permease GRF56_RS07490 PF01276 Orn/Lys/Arg decarboxylase, major domain GRF56_RS07490 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GRF56_RS07490 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GRF56_RS07495 PF08543 Phosphomethylpyrimidine kinase GRF56_RS07510 PF01431 Peptidase family M13 GRF56_RS07510 PF05649 Peptidase family M13 GRF56_RS07515 PF01171 PP-loop family GRF56_RS07515 PF09179 TilS substrate binding domain GRF56_RS07515 PF11734 TilS substrate C-terminal domain GRF56_RS07520 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS07525 PF02254 TrkA-N domain GRF56_RS07525 PF00999 Sodium/hydrogen exchanger family GRF56_RS07525 PF02080 TrkA-C domain GRF56_RS07545 PF00196 Bacterial regulatory proteins, luxR family GRF56_RS07545 PF00072 Response regulator receiver domain GRF56_RS07555 PF00128 Alpha amylase, catalytic domain GRF56_RS07570 PF00535 Glycosyl transferase family 2 GRF56_RS07585 PF01471 Putative peptidoglycan binding domain GRF56_RS07585 PF03734 L,D-transpeptidase catalytic domain GRF56_RS07590 PF05951 Bacterial protein of unknown function (DUF882) GRF56_RS07600 PF03458 UPF0126 domain GRF56_RS07610 PF06470 SMC proteins Flexible Hinge Domain GRF56_RS07610 PF02463 RecF/RecN/SMC N terminal domain GRF56_RS07615 PF04354 ZipA, C-terminal FtsZ-binding domain GRF56_RS07620 PF01653 NAD-dependent DNA ligase adenylation domain GRF56_RS07620 PF00533 BRCA1 C Terminus (BRCT) domain GRF56_RS07620 PF03120 NAD-dependent DNA ligase OB-fold domain GRF56_RS07620 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GRF56_RS07620 PF12826 Helix-hairpin-helix motif GRF56_RS07630 PF03477 ATP cone domain GRF56_RS07630 PF13597 Anaerobic ribonucleoside-triphosphate reductase GRF56_RS07640 PF01679 Proteolipid membrane potential modulator GRF56_RS07665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GRF56_RS07665 PF00529 HlyD membrane-fusion protein of T1SS GRF56_RS07670 PF01047 MarR family GRF56_RS07675 PF03390 2-hydroxycarboxylate transporter family GRF56_RS07680 PF03949 Malic enzyme, NAD binding domain GRF56_RS07680 PF00390 Malic enzyme, N-terminal domain GRF56_RS07685 PF00989 PAS fold GRF56_RS07685 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GRF56_RS07685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS07685 PF17203 Single cache domain 3 GRF56_RS07690 PF12431 Transcriptional regulator GRF56_RS07690 PF00072 Response regulator receiver domain GRF56_RS07695 PF00892 EamA-like transporter family GRF56_RS07705 PF00171 Aldehyde dehydrogenase family GRF56_RS07710 PF00158 Sigma-54 interaction domain GRF56_RS07710 PF01590 GAF domain GRF56_RS07710 PF02954 Bacterial regulatory protein, Fis family GRF56_RS07715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GRF56_RS07720 PF00072 Response regulator receiver domain GRF56_RS07720 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS07725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS07725 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS07725 PF00989 PAS fold GRF56_RS07725 PF11808 Phosphate regulon sensor protein PhoR GRF56_RS07730 PF12849 PBP superfamily domain GRF56_RS07735 PF01435 Peptidase family M48 GRF56_RS07745 PF00480 ROK family GRF56_RS07750 PF03932 CutC family GRF56_RS07755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GRF56_RS07755 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GRF56_RS07770 PF00293 NUDIX domain GRF56_RS07780 PF08534 Redoxin GRF56_RS07785 PF01699 Sodium/calcium exchanger protein GRF56_RS07790 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GRF56_RS07790 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GRF56_RS07795 PF01235 Sodium:alanine symporter family GRF56_RS07800 PF13087 AAA domain GRF56_RS07800 PF13086 AAA domain GRF56_RS07800 PF13087 AAA domain GRF56_RS07800 PF13195 Protein of unknown function (DUF4011) GRF56_RS07800 PF13086 AAA domain GRF56_RS07800 PF13195 Protein of unknown function (DUF4011) GRF56_RS07810 PF00860 Permease family GRF56_RS07815 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS07820 PF10692 Protein of unknown function (DUF2498) GRF56_RS07825 PF01554 MatE GRF56_RS07830 PF12833 Helix-turn-helix domain GRF56_RS07835 PF00390 Malic enzyme, N-terminal domain GRF56_RS07835 PF03949 Malic enzyme, NAD binding domain GRF56_RS07840 PF01389 OmpA-like transmembrane domain GRF56_RS07840 PF00691 OmpA family GRF56_RS07845 PF00691 OmpA family GRF56_RS07845 PF01389 OmpA-like transmembrane domain GRF56_RS07850 PF00691 OmpA family GRF56_RS07850 PF01389 OmpA-like transmembrane domain GRF56_RS07865 PF13520 Amino acid permease GRF56_RS07870 PF01734 Patatin-like phospholipase GRF56_RS07875 PF17158 Membrane-associated sensor, integral membrane domain GRF56_RS07875 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS07880 PF00529 HlyD membrane-fusion protein of T1SS GRF56_RS07880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GRF56_RS07885 PF00873 AcrB/AcrD/AcrF family GRF56_RS07890 PF04055 Radical SAM superfamily GRF56_RS07890 PF11842 Domain of unknown function (DUF3362) GRF56_RS07890 PF08497 Radical SAM N-terminal GRF56_RS07895 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GRF56_RS07920 PF04151 Bacterial pre-peptidase C-terminal domain GRF56_RS07920 PF04389 Peptidase family M28 GRF56_RS07935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS07935 PF03466 LysR substrate binding domain GRF56_RS07945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GRF56_RS07950 PF04358 DsrC like protein GRF56_RS07955 PF12805 FUSC-like inner membrane protein yccS GRF56_RS07960 PF01027 Inhibitor of apoptosis-promoting Bax1 GRF56_RS07970 PF08220 DeoR-like helix-turn-helix domain GRF56_RS07970 PF00455 DeoR C terminal sensor domain GRF56_RS07975 PF01261 Xylose isomerase-like TIM barrel GRF56_RS07990 PF03611 PTS system sugar-specific permease component GRF56_RS07995 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GRF56_RS08000 PF00596 Class II Aldolase and Adducin N-terminal domain GRF56_RS08005 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GRF56_RS08010 PF04794 YdjC-like protein GRF56_RS08015 PF11975 Family 4 glycosyl hydrolase C-terminal domain GRF56_RS08015 PF02056 Family 4 glycosyl hydrolase GRF56_RS08020 PF07883 Cupin domain GRF56_RS08020 PF12833 Helix-turn-helix domain GRF56_RS08025 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GRF56_RS08030 PF00232 Glycosyl hydrolase family 1 GRF56_RS08035 PF02378 Phosphotransferase system, EIIC GRF56_RS08040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GRF56_RS08045 PF01203 Type II secretion system (T2SS), protein N GRF56_RS08050 PF04612 Type II secretion system (T2SS), protein M GRF56_RS08055 PF12693 GspL periplasmic domain GRF56_RS08055 PF05134 Type II secretion system (T2SS), protein L GRF56_RS08060 PF03934 Type II secretion system (T2SS), protein K GRF56_RS08065 PF11612 Type II secretion system (T2SS), protein J GRF56_RS08065 PF07963 Prokaryotic N-terminal methylation motif GRF56_RS08070 PF07963 Prokaryotic N-terminal methylation motif GRF56_RS08070 PF02501 Type II secretion system (T2SS), protein I GRF56_RS08075 PF07963 Prokaryotic N-terminal methylation motif GRF56_RS08075 PF12019 Type II transport protein GspH GRF56_RS08080 PF07963 Prokaryotic N-terminal methylation motif GRF56_RS08080 PF08334 Type II secretion system (T2SS), protein G GRF56_RS08085 PF00482 Type II secretion system (T2SS), protein F GRF56_RS08090 PF00437 Type II/IV secretion system protein GRF56_RS08095 PF03958 Bacterial type II/III secretion system short domain GRF56_RS08095 PF00263 Bacterial type II and III secretion system protein GRF56_RS08100 PF11356 Type II secretion system protein C GRF56_RS08105 PF16537 Type II secretion system protein B GRF56_RS08110 PF13401 AAA domain GRF56_RS08110 PF01471 Putative peptidoglycan binding domain GRF56_RS08115 PF01966 HD domain GRF56_RS08115 PF00672 HAMP domain GRF56_RS08120 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GRF56_RS08120 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GRF56_RS08130 PF00004 ATPase family associated with various cellular activities (AAA) GRF56_RS08130 PF17862 AAA+ lid domain GRF56_RS08130 PF01434 Peptidase family M41 GRF56_RS08135 PF00291 Pyridoxal-phosphate dependent enzyme GRF56_RS08140 PF00381 PTS HPr component phosphorylation site GRF56_RS08145 PF02896 PEP-utilising enzyme, TIM barrel domain GRF56_RS08145 PF05524 PEP-utilising enzyme, N-terminal GRF56_RS08145 PF00391 PEP-utilising enzyme, mobile domain GRF56_RS08150 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GRF56_RS08155 PF08448 PAS fold GRF56_RS08155 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS08160 PF01431 Peptidase family M13 GRF56_RS08160 PF05649 Peptidase family M13 GRF56_RS08175 PF00924 Mechanosensitive ion channel GRF56_RS08175 PF12795 Mechanosensitive ion channel porin domain GRF56_RS08175 PF12794 Mechanosensitive ion channel inner membrane domain 1 GRF56_RS08180 PF00224 Pyruvate kinase, barrel domain GRF56_RS08180 PF02887 Pyruvate kinase, alpha/beta domain GRF56_RS08190 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GRF56_RS08210 PF13476 AAA domain GRF56_RS08215 PF12320 Type 5 capsule protein repressor C-terminal domain GRF56_RS08215 PF00149 Calcineurin-like phosphoesterase GRF56_RS08225 PF04381 Putative exonuclease, RdgC GRF56_RS08235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GRF56_RS08235 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GRF56_RS08240 PF02690 Na+/Pi-cotransporter GRF56_RS08250 PF00324 Amino acid permease GRF56_RS08260 PF00324 Amino acid permease GRF56_RS08265 PF00202 Aminotransferase class-III GRF56_RS08270 PF00171 Aldehyde dehydrogenase family GRF56_RS08275 PF07883 Cupin domain GRF56_RS08275 PF01381 Helix-turn-helix GRF56_RS08280 PF01266 FAD dependent oxidoreductase GRF56_RS08305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS08305 PF08918 PhoQ Sensor GRF56_RS08310 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS08310 PF00072 Response regulator receiver domain GRF56_RS08320 PF01292 Prokaryotic cytochrome b561 GRF56_RS08325 PF18389 TrmO C-terminal domain GRF56_RS08325 PF01980 tRNA-methyltransferase O GRF56_RS08345 PF00005 ABC transporter GRF56_RS08345 PF00664 ABC transporter transmembrane region GRF56_RS08350 PF00664 ABC transporter transmembrane region GRF56_RS08350 PF00005 ABC transporter GRF56_RS08370 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS08370 PF00072 Response regulator receiver domain GRF56_RS08380 PF03737 Aldolase/RraA GRF56_RS08400 PF06953 Arsenical resistance operon trans-acting repressor ArsD GRF56_RS08405 PF02374 Anion-transporting ATPase GRF56_RS08410 PF01758 Sodium Bile acid symporter family GRF56_RS08415 PF03960 ArsC family GRF56_RS08420 PF01773 Na+ dependent nucleoside transporter N-terminus GRF56_RS08420 PF07662 Na+ dependent nucleoside transporter C-terminus GRF56_RS08420 PF07670 Nucleoside recognition GRF56_RS08440 PF04307 LexA-binding, inner membrane-associated putative hydrolase GRF56_RS08455 PF00290 Tryptophan synthase alpha chain GRF56_RS08460 PF00291 Pyridoxal-phosphate dependent enzyme GRF56_RS08465 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GRF56_RS08465 PF00218 Indole-3-glycerol phosphate synthase GRF56_RS08470 PF00591 Glycosyl transferase family, a/b domain GRF56_RS08470 PF02885 Glycosyl transferase family, helical bundle domain GRF56_RS08475 PF00117 Glutamine amidotransferase class-I GRF56_RS08475 PF02885 Glycosyl transferase family, helical bundle domain GRF56_RS08475 PF00591 Glycosyl transferase family, a/b domain GRF56_RS08480 PF04715 Anthranilate synthase component I, N terminal region GRF56_RS08480 PF00425 chorismate binding enzyme GRF56_RS08485 PF02811 PHP domain GRF56_RS08490 PF01300 Telomere recombination GRF56_RS08495 PF02616 Segregation and condensation protein ScpA GRF56_RS08500 PF04079 Segregation and condensation complex subunit ScpB GRF56_RS08505 PF01479 S4 domain GRF56_RS08505 PF00849 RNA pseudouridylate synthase GRF56_RS08515 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) GRF56_RS08520 PF00588 SpoU rRNA Methylase family GRF56_RS08530 PF03447 Homoserine dehydrogenase, NAD binding domain GRF56_RS08530 PF00742 Homoserine dehydrogenase GRF56_RS08530 PF13840 ACT domain GRF56_RS08530 PF01842 ACT domain GRF56_RS08530 PF00696 Amino acid kinase family GRF56_RS08535 PF00288 GHMP kinases N terminal domain GRF56_RS08535 PF08544 GHMP kinases C terminal GRF56_RS08540 PF00291 Pyridoxal-phosphate dependent enzyme GRF56_RS08540 PF14821 Threonine synthase N terminus GRF56_RS08545 PF06470 SMC proteins Flexible Hinge Domain GRF56_RS08545 PF02463 RecF/RecN/SMC N terminal domain GRF56_RS08560 PF04055 Radical SAM superfamily GRF56_RS08560 PF00919 Uncharacterized protein family UPF0004 GRF56_RS08560 PF18693 TRAM domain GRF56_RS08575 PF00816 H-NS histone family GRF56_RS08605 PF00072 Response regulator receiver domain GRF56_RS08605 PF00196 Bacterial regulatory proteins, luxR family GRF56_RS08610 PF05231 MASE1 GRF56_RS08610 PF08447 PAS fold GRF56_RS08610 PF08448 PAS fold GRF56_RS08610 PF13426 PAS domain GRF56_RS08610 PF00563 EAL domain GRF56_RS08610 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS08620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS08620 PF00672 HAMP domain GRF56_RS08630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS08630 PF03466 LysR substrate binding domain GRF56_RS08635 PF03601 Conserved hypothetical protein 698 GRF56_RS08645 PF00072 Response regulator receiver domain GRF56_RS08645 PF00196 Bacterial regulatory proteins, luxR family GRF56_RS08650 PF00158 Sigma-54 interaction domain GRF56_RS08650 PF01590 GAF domain GRF56_RS08655 PF00258 Flavodoxin GRF56_RS08655 PF00753 Metallo-beta-lactamase superfamily GRF56_RS08655 PF00301 Rubredoxin GRF56_RS08660 PF07992 Pyridine nucleotide-disulphide oxidoreductase GRF56_RS08660 PF18113 Rubredoxin binding C-terminal domain GRF56_RS08675 PF00072 Response regulator receiver domain GRF56_RS08675 PF00196 Bacterial regulatory proteins, luxR family GRF56_RS08685 PF07690 Major Facilitator Superfamily GRF56_RS08690 PF00384 Molybdopterin oxidoreductase GRF56_RS08690 PF01568 Molydopterin dinucleotide binding domain GRF56_RS08690 PF14710 Respiratory nitrate reductase alpha N-terminal GRF56_RS08695 PF13247 4Fe-4S dicluster domain GRF56_RS08695 PF14711 Respiratory nitrate reductase beta C-terminal GRF56_RS08700 PF02613 Nitrate reductase delta subunit GRF56_RS08705 PF02665 Nitrate reductase gamma subunit GRF56_RS08730 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS08730 PF00072 Response regulator receiver domain GRF56_RS08735 PF00563 EAL domain GRF56_RS08735 PF03707 Bacterial signalling protein N terminal repeat GRF56_RS08735 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS08770 PF00072 Response regulator receiver domain GRF56_RS08785 PF02001 Protein of unknown function DUF134 GRF56_RS08800 PF08361 MAATS-type transcriptional repressor, C-terminal region GRF56_RS08800 PF00440 Bacterial regulatory proteins, tetR family GRF56_RS08805 PF00529 HlyD membrane-fusion protein of T1SS GRF56_RS08805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GRF56_RS08810 PF00873 AcrB/AcrD/AcrF family GRF56_RS08815 PF16363 GDP-mannose 4,6 dehydratase GRF56_RS08820 PF04321 RmlD substrate binding domain GRF56_RS08825 PF00483 Nucleotidyl transferase GRF56_RS08830 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GRF56_RS08835 PF00175 Oxidoreductase NAD-binding domain GRF56_RS08835 PF00111 2Fe-2S iron-sulfur cluster binding domain GRF56_RS08835 PF00970 Oxidoreductase FAD-binding domain GRF56_RS08840 PF00483 Nucleotidyl transferase GRF56_RS08845 PF16363 GDP-mannose 4,6 dehydratase GRF56_RS08850 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GRF56_RS08855 PF01370 NAD dependent epimerase/dehydratase family GRF56_RS08865 PF00535 Glycosyl transferase family 2 GRF56_RS08875 PF00005 ABC transporter GRF56_RS08875 PF00664 ABC transporter transmembrane region GRF56_RS08895 PF13439 Glycosyltransferase Family 4 GRF56_RS08900 PF13439 Glycosyltransferase Family 4 GRF56_RS08900 PF00534 Glycosyl transferases group 1 GRF56_RS08905 PF01050 Mannose-6-phosphate isomerase GRF56_RS08905 PF00483 Nucleotidyl transferase GRF56_RS08910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GRF56_RS08910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GRF56_RS08910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GRF56_RS08910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GRF56_RS08915 PF02397 Bacterial sugar transferase GRF56_RS08925 PF02706 Chain length determinant protein GRF56_RS08925 PF13807 G-rich domain on putative tyrosine kinase GRF56_RS08925 PF13614 AAA domain GRF56_RS08940 PF06251 Capsule biosynthesis GfcC GRF56_RS08945 PF06082 Exopolysaccharide biosynthesis protein YbjH GRF56_RS08950 PF02706 Chain length determinant protein GRF56_RS08960 PF00816 H-NS histone family GRF56_RS08965 PF02321 Outer membrane efflux protein GRF56_RS08970 PF02687 FtsX-like permease family GRF56_RS08970 PF12704 MacB-like periplasmic core domain GRF56_RS08970 PF00005 ABC transporter GRF56_RS08975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GRF56_RS08980 PF01368 DHH family GRF56_RS08980 PF02833 DHHA2 domain GRF56_RS08985 PF02463 RecF/RecN/SMC N terminal domain GRF56_RS08990 PF01513 ATP-NAD kinase GRF56_RS08995 PF01025 GrpE GRF56_RS09000 PF00012 Hsp70 protein GRF56_RS09005 PF00226 DnaJ domain GRF56_RS09005 PF00684 DnaJ central domain GRF56_RS09005 PF01556 DnaJ C terminal domain GRF56_RS09010 PF11471 Maltoporin periplasmic N-terminal extension GRF56_RS09010 PF02264 LamB porin GRF56_RS09015 PF00294 pfkB family carbohydrate kinase GRF56_RS09020 PF02378 Phosphotransferase system, EIIC GRF56_RS09020 PF00367 phosphotransferase system, EIIB GRF56_RS09025 PF08244 Glycosyl hydrolases family 32 C terminal GRF56_RS09025 PF00251 Glycosyl hydrolases family 32 N-terminal domain GRF56_RS09030 PF13407 Periplasmic binding protein domain GRF56_RS09030 PF00356 Bacterial regulatory proteins, lacI family GRF56_RS09035 PF02308 MgtC family GRF56_RS09045 PF07992 Pyridine nucleotide-disulphide oxidoreductase GRF56_RS09060 PF04143 Sulphur transport GRF56_RS09075 PF00873 AcrB/AcrD/AcrF family GRF56_RS09085 PF02687 FtsX-like permease family GRF56_RS09085 PF00005 ABC transporter GRF56_RS09085 PF12704 MacB-like periplasmic core domain GRF56_RS09090 PF02687 FtsX-like permease family GRF56_RS09090 PF00005 ABC transporter GRF56_RS09090 PF12704 MacB-like periplasmic core domain GRF56_RS09095 PF00005 ABC transporter GRF56_RS09095 PF12704 MacB-like periplasmic core domain GRF56_RS09095 PF02687 FtsX-like permease family GRF56_RS09100 PF03707 Bacterial signalling protein N terminal repeat GRF56_RS09100 PF00563 EAL domain GRF56_RS09100 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS09105 PF03099 Biotin/lipoate A/B protein ligase family GRF56_RS09105 PF10437 Bacterial lipoate protein ligase C-terminus GRF56_RS09115 PF13460 NAD(P)H-binding GRF56_RS09120 PF04355 SmpA / OmlA family GRF56_RS09125 PF00465 Iron-containing alcohol dehydrogenase GRF56_RS09130 PF01048 Phosphorylase superfamily GRF56_RS09135 PF00849 RNA pseudouridylate synthase GRF56_RS09140 PF01156 Inosine-uridine preferring nucleoside hydrolase GRF56_RS09155 PF07509 Protein of unknown function (DUF1523) GRF56_RS09160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS09160 PF00672 HAMP domain GRF56_RS09160 PF12729 Four helix bundle sensory module for signal transduction GRF56_RS09165 PF01810 LysE type translocator GRF56_RS09180 PF00999 Sodium/hydrogen exchanger family GRF56_RS09180 PF03471 Transporter associated domain GRF56_RS09180 PF02080 TrkA-C domain GRF56_RS09190 PF02557 D-alanyl-D-alanine carboxypeptidase GRF56_RS09195 PF07687 Peptidase dimerisation domain GRF56_RS09195 PF01546 Peptidase family M20/M25/M40 GRF56_RS09200 PF03960 ArsC family GRF56_RS09210 PF03606 C4-dicarboxylate anaerobic carrier GRF56_RS09215 PF07687 Peptidase dimerisation domain GRF56_RS09215 PF01546 Peptidase family M20/M25/M40 GRF56_RS09225 PF03605 Anaerobic c4-dicarboxylate membrane transporter GRF56_RS09235 PF01336 OB-fold nucleic acid binding domain GRF56_RS09235 PF00152 tRNA synthetases class II (D, K and N) GRF56_RS09250 PF00202 Aminotransferase class-III GRF56_RS09255 PF04055 Radical SAM superfamily GRF56_RS09255 PF06968 Biotin and Thiamin Synthesis associated domain GRF56_RS09260 PF00155 Aminotransferase class I and II GRF56_RS09265 PF08241 Methyltransferase domain GRF56_RS09265 PF12697 Alpha/beta hydrolase family GRF56_RS09275 PF01435 Peptidase family M48 GRF56_RS09280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS09280 PF08447 PAS fold GRF56_RS09280 PF13426 PAS domain GRF56_RS09285 PF03476 MOSC N-terminal beta barrel domain GRF56_RS09285 PF03473 MOSC domain GRF56_RS09285 PF00111 2Fe-2S iron-sulfur cluster binding domain GRF56_RS09285 PF03476 MOSC N-terminal beta barrel domain GRF56_RS09285 PF03473 MOSC domain GRF56_RS09285 PF00111 2Fe-2S iron-sulfur cluster binding domain GRF56_RS09295 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GRF56_RS09295 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GRF56_RS09295 PF07992 Pyridine nucleotide-disulphide oxidoreductase GRF56_RS09300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GRF56_RS09300 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg GRF56_RS09300 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase GRF56_RS09300 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II GRF56_RS09300 PF10371 Domain of unknown function GRF56_RS09310 PF01370 NAD dependent epimerase/dehydratase family GRF56_RS09315 PF03061 Thioesterase superfamily GRF56_RS09325 PF03372 Endonuclease/Exonuclease/phosphatase family GRF56_RS09330 PF00462 Glutaredoxin GRF56_RS09335 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GRF56_RS09340 PF04851 Type III restriction enzyme, res subunit GRF56_RS09340 PF00271 Helicase conserved C-terminal domain GRF56_RS09345 PF00529 HlyD membrane-fusion protein of T1SS GRF56_RS09345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GRF56_RS09350 PF11742 Protein of unknown function (DUF3302) GRF56_RS09355 PF02554 Carbon starvation protein CstA GRF56_RS09360 PF00072 Response regulator receiver domain GRF56_RS09360 PF04397 LytTr DNA-binding domain GRF56_RS09365 PF06580 Histidine kinase GRF56_RS09365 PF07694 5TMR of 5TMR-LYT GRF56_RS09370 PF01966 HD domain GRF56_RS09375 PF00884 Sulfatase GRF56_RS09375 PF08019 Phosphoethanolamine transferase EptA/EptB GRF56_RS09380 PF01047 MarR family GRF56_RS09380 PF00480 ROK family GRF56_RS09385 PF01979 Amidohydrolase family GRF56_RS09390 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GRF56_RS09395 PF02378 Phosphotransferase system, EIIC GRF56_RS09395 PF00367 phosphotransferase system, EIIB GRF56_RS09395 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GRF56_RS09400 PF00728 Glycosyl hydrolase family 20, catalytic domain GRF56_RS09400 PF02838 Glycosyl hydrolase family 20, domain 2 GRF56_RS09400 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain GRF56_RS09400 PF03173 Putative carbohydrate binding domain GRF56_RS09405 PF00749 tRNA synthetases class I (E and Q), catalytic domain GRF56_RS09405 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GRF56_RS09410 PF01475 Ferric uptake regulator family GRF56_RS09420 PF00258 Flavodoxin GRF56_RS09425 PF01402 Ribbon-helix-helix protein, copG family GRF56_RS09435 PF12697 Alpha/beta hydrolase family GRF56_RS09440 PF17206 SeqA protein N-terminal domain GRF56_RS09440 PF03925 SeqA protein C-terminal domain GRF56_RS09445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GRF56_RS09445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GRF56_RS09445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GRF56_RS09445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GRF56_RS09455 PF01047 MarR family GRF56_RS09460 PF13406 Transglycosylase SLT domain GRF56_RS09465 PF01066 CDP-alcohol phosphatidyltransferase GRF56_RS09470 PF00005 ABC transporter GRF56_RS09480 PF13416 Bacterial extracellular solute-binding protein GRF56_RS09485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GRF56_RS09485 PF00403 Heavy-metal-associated domain GRF56_RS09485 PF07992 Pyridine nucleotide-disulphide oxidoreductase GRF56_RS09490 PF02627 Carboxymuconolactone decarboxylase family GRF56_RS09510 PF17243 POTRA domain TamA domain 1 GRF56_RS09510 PF01103 Surface antigen GRF56_RS09510 PF07244 Surface antigen variable number repeat GRF56_RS09515 PF04357 TamB, inner membrane protein subunit of TAM complex GRF56_RS09535 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GRF56_RS09540 PF03707 Bacterial signalling protein N terminal repeat GRF56_RS09540 PF00563 EAL domain GRF56_RS09540 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS09545 PF01464 Transglycosylase SLT domain GRF56_RS09545 PF14718 Soluble lytic murein transglycosylase L domain GRF56_RS09550 PF00356 Bacterial regulatory proteins, lacI family GRF56_RS09555 PF00793 DAHP synthetase I family GRF56_RS09560 PF07715 TonB-dependent Receptor Plug Domain GRF56_RS09560 PF00593 TonB dependent receptor GRF56_RS09565 PF00425 chorismate binding enzyme GRF56_RS09570 PF00501 AMP-binding enzyme GRF56_RS09570 PF13193 AMP-binding enzyme C-terminal domain GRF56_RS09575 PF00857 Isochorismatase family GRF56_RS09575 PF00550 Phosphopantetheine attachment site GRF56_RS09585 PF00668 Condensation domain GRF56_RS09585 PF00975 Thioesterase domain GRF56_RS09585 PF00550 Phosphopantetheine attachment site GRF56_RS09585 PF00501 AMP-binding enzyme GRF56_RS09595 PF00676 Dehydrogenase E1 component GRF56_RS09600 PF02780 Transketolase, C-terminal domain GRF56_RS09600 PF02779 Transketolase, pyrimidine binding domain GRF56_RS09605 PF00364 Biotin-requiring enzyme GRF56_RS09605 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GRF56_RS09605 PF02817 e3 binding domain GRF56_RS09610 PF00313 'Cold-shock' DNA-binding domain GRF56_RS09635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GRF56_RS09640 PF08220 DeoR-like helix-turn-helix domain GRF56_RS09640 PF00455 DeoR C terminal sensor domain GRF56_RS09650 PF04055 Radical SAM superfamily GRF56_RS09655 PF00923 Transaldolase/Fructose-6-phosphate aldolase GRF56_RS09665 PF11849 Domain of unknown function (DUF3369) GRF56_RS09670 PF00849 RNA pseudouridylate synthase GRF56_RS09670 PF01479 S4 domain GRF56_RS09680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GRF56_RS09685 PF12850 Calcineurin-like phosphoesterase superfamily domain GRF56_RS09700 PF13144 Chaperone for flagella basal body P-ring formation GRF56_RS09705 PF01584 CheW-like domain GRF56_RS09705 PF00072 Response regulator receiver domain GRF56_RS09710 PF01739 CheR methyltransferase, SAM binding domain GRF56_RS09710 PF03705 CheR methyltransferase, all-alpha domain GRF56_RS09715 PF00460 Flagella basal body rod protein GRF56_RS09720 PF00460 Flagella basal body rod protein GRF56_RS09720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GRF56_RS09725 PF13860 FlgD Ig-like domain GRF56_RS09725 PF13861 FlgD Tudor-like domain GRF56_RS09725 PF03963 Flagellar hook capping protein - N-terminal region GRF56_RS09730 PF07559 Flagellar basal body protein FlaE GRF56_RS09730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GRF56_RS09730 PF00460 Flagella basal body rod protein GRF56_RS09735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GRF56_RS09735 PF00460 Flagella basal body rod protein GRF56_RS09740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GRF56_RS09740 PF00460 Flagella basal body rod protein GRF56_RS09745 PF02107 Flagellar L-ring protein GRF56_RS09750 PF02119 Flagellar P-ring protein GRF56_RS09755 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GRF56_RS09755 PF10135 Rod binding protein GRF56_RS09760 PF07196 Flagellin hook IN motif GRF56_RS09760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GRF56_RS09765 PF00669 Bacterial flagellin N-terminal helical region GRF56_RS09770 PF03448 MgtE intracellular N domain GRF56_RS09770 PF00571 CBS domain GRF56_RS09770 PF01769 Divalent cation transporter GRF56_RS09775 PF02541 Ppx/GppA phosphatase family GRF56_RS09780 PF02503 Polyphosphate kinase middle domain GRF56_RS09780 PF13090 Polyphosphate kinase C-terminal domain 2 GRF56_RS09780 PF13089 Polyphosphate kinase N-terminal domain GRF56_RS09780 PF17941 Polyphosphate kinase C-terminal domain 1 GRF56_RS09785 PF01842 ACT domain GRF56_RS09795 PF02954 Bacterial regulatory protein, Fis family GRF56_RS09795 PF00072 Response regulator receiver domain GRF56_RS09795 PF00158 Sigma-54 interaction domain GRF56_RS09800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS09800 PF00989 PAS fold GRF56_RS09800 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS09805 PF02954 Bacterial regulatory protein, Fis family GRF56_RS09805 PF00158 Sigma-54 interaction domain GRF56_RS09810 PF01784 NIF3 (NGG1p interacting factor 3) GRF56_RS09815 PF00551 Formyl transferase GRF56_RS09820 PF00586 AIR synthase related protein, N-terminal domain GRF56_RS09820 PF02769 AIR synthase related protein, C-terminal domain GRF56_RS09835 PF00308 Bacterial dnaA protein GRF56_RS09840 PF00463 Isocitrate lyase family GRF56_RS09845 PF01274 Malate synthase GRF56_RS09855 PF14437 MafB19-like deaminase GRF56_RS09860 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS09865 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS09875 PF01895 PhoU domain GRF56_RS09880 PF03471 Transporter associated domain GRF56_RS09880 PF01595 Cyclin M transmembrane N-terminal domain GRF56_RS09880 PF00571 CBS domain GRF56_RS09890 PF02574 Homocysteine S-methyltransferase GRF56_RS09890 PF02310 B12 binding domain GRF56_RS09890 PF02607 B12 binding domain GRF56_RS09890 PF02965 Vitamin B12 dependent methionine synthase, activation domain GRF56_RS09890 PF00809 Pterin binding enzyme GRF56_RS09895 PF13520 Amino acid permease GRF56_RS09900 PF04116 Fatty acid hydroxylase superfamily GRF56_RS09910 PF00005 ABC transporter GRF56_RS09915 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS09920 PF00497 Bacterial extracellular solute-binding proteins, family 3 GRF56_RS09925 PF08448 PAS fold GRF56_RS09925 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS09930 PF07690 Major Facilitator Superfamily GRF56_RS09935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS09935 PF05231 MASE1 GRF56_RS09935 PF07730 Histidine kinase GRF56_RS09940 PF00196 Bacterial regulatory proteins, luxR family GRF56_RS09940 PF00072 Response regulator receiver domain GRF56_RS09945 PF01272 Transcription elongation factor, GreA/GreB, C-term GRF56_RS09945 PF14760 Rnk N-terminus GRF56_RS09960 PF00245 Alkaline phosphatase GRF56_RS09965 PF00245 Alkaline phosphatase GRF56_RS09970 PF01926 50S ribosome-binding GTPase GRF56_RS09975 PF00850 Histone deacetylase domain GRF56_RS09985 PF06733 DEAD_2 GRF56_RS09985 PF13307 Helicase C-terminal domain GRF56_RS09990 PF13609 Gram-negative porin GRF56_RS09995 PF01817 Chorismate mutase type II GRF56_RS09995 PF02153 Prephenate dehydrogenase GRF56_RS10000 PF00793 DAHP synthetase I family GRF56_RS10005 PF00483 Nucleotidyl transferase GRF56_RS10010 PF07549 SecD/SecF GG Motif GRF56_RS10010 PF02355 Protein export membrane protein GRF56_RS10015 PF02355 Protein export membrane protein GRF56_RS10015 PF07549 SecD/SecF GG Motif GRF56_RS10015 PF13721 SecD export protein N-terminal TM region GRF56_RS10050 PF01230 HIT domain GRF56_RS10055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS10055 PF00672 HAMP domain GRF56_RS10065 PF01979 Amidohydrolase family GRF56_RS10080 PF00375 Sodium:dicarboxylate symporter family GRF56_RS10085 PF00672 HAMP domain GRF56_RS10085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS10095 PF05661 Protein of unknown function (DUF808) GRF56_RS10105 PF00860 Permease family GRF56_RS10110 PF05728 Uncharacterised protein family (UPF0227) GRF56_RS10115 PF07992 Pyridine nucleotide-disulphide oxidoreductase GRF56_RS10125 PF04055 Radical SAM superfamily GRF56_RS10130 PF00563 EAL domain GRF56_RS10130 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS10130 PF03707 Bacterial signalling protein N terminal repeat GRF56_RS10135 PF07992 Pyridine nucleotide-disulphide oxidoreductase GRF56_RS10135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GRF56_RS10145 PF00207 Alpha-2-macroglobulin family GRF56_RS10145 PF07703 Alpha-2-macroglobulin bait region domain GRF56_RS10145 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain GRF56_RS10145 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain GRF56_RS10145 PF11974 Bacterial alpha-2-macroglobulin MG3 domain GRF56_RS10145 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain GRF56_RS10145 PF17962 Bacterial macroglobulin domain 6 GRF56_RS10145 PF01835 MG2 domain GRF56_RS10145 PF07678 A-macroglobulin TED domain GRF56_RS10150 PF00905 Penicillin binding protein transpeptidase domain GRF56_RS10150 PF00912 Transglycosylase GRF56_RS10150 PF06832 Penicillin-Binding Protein C-terminus Family GRF56_RS10175 PF00589 Phage integrase family GRF56_RS10175 PF02899 Phage integrase, N-terminal SAM-like domain GRF56_RS10190 PF02796 Helix-turn-helix domain of resolvase GRF56_RS10190 PF00239 Resolvase, N terminal domain GRF56_RS10220 PF02568 Thiamine biosynthesis protein (ThiI) GRF56_RS10220 PF02926 THUMP domain GRF56_RS10230 PF03458 UPF0126 domain GRF56_RS10240 PF00700 Bacterial flagellin C-terminal helical region GRF56_RS10240 PF07196 Flagellin hook IN motif GRF56_RS10240 PF00669 Bacterial flagellin N-terminal helical region GRF56_RS10245 PF00669 Bacterial flagellin N-terminal helical region GRF56_RS10245 PF07196 Flagellin hook IN motif GRF56_RS10245 PF00700 Bacterial flagellin C-terminal helical region GRF56_RS10255 PF07196 Flagellin hook IN motif GRF56_RS10255 PF07195 Flagellar hook-associated protein 2 C-terminus GRF56_RS10255 PF02465 Flagellar hook-associated protein 2 N-terminus GRF56_RS10260 PF02561 Flagellar protein FliS GRF56_RS10295 PF16221 winged helix-turn-helix GRF56_RS10295 PF09940 Domain of unknown function (DUF2172) GRF56_RS10295 PF16254 Domain of unknown function (DUF4910) GRF56_RS10310 PF08666 SAF domain GRF56_RS10310 PF03102 NeuB family GRF56_RS10320 PF02348 Cytidylyltransferase GRF56_RS10340 PF00501 AMP-binding enzyme GRF56_RS10340 PF13193 AMP-binding enzyme C-terminal domain GRF56_RS10355 PF00535 Glycosyl transferase family 2 GRF56_RS10360 PF03275 UDP-galactopyranose mutase GRF56_RS10365 PF16363 GDP-mannose 4,6 dehydratase GRF56_RS10370 PF02310 B12 binding domain GRF56_RS10370 PF04055 Radical SAM superfamily GRF56_RS10410 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GRF56_RS10415 PF02719 Polysaccharide biosynthesis protein GRF56_RS10420 PF01497 Periplasmic binding protein GRF56_RS10425 PF03186 CobD/Cbib protein GRF56_RS10425 PF17113 Regulatory signalling modulator protein AmpE GRF56_RS10430 PF01048 Phosphorylase superfamily GRF56_RS10435 PF02535 ZIP Zinc transporter GRF56_RS10445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS10445 PF00672 HAMP domain GRF56_RS10450 PF00459 Inositol monophosphatase family GRF56_RS10460 PF00043 Glutathione S-transferase, C-terminal domain GRF56_RS10460 PF02798 Glutathione S-transferase, N-terminal domain GRF56_RS10465 PF07690 Major Facilitator Superfamily GRF56_RS10470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS10470 PF03466 LysR substrate binding domain GRF56_RS10475 PF02634 FdhD/NarQ family GRF56_RS10480 PF00384 Molybdopterin oxidoreductase GRF56_RS10490 PF05164 Cell division protein ZapA GRF56_RS10495 PF03695 Uncharacterised protein family (UPF0149) GRF56_RS10500 PF01494 FAD binding domain GRF56_RS10505 PF01494 FAD binding domain GRF56_RS10510 PF08669 Glycine cleavage T-protein C-terminal barrel domain GRF56_RS10510 PF01571 Aminomethyltransferase folate-binding domain GRF56_RS10515 PF01597 Glycine cleavage H-protein GRF56_RS10520 PF02347 Glycine cleavage system P-protein GRF56_RS10530 PF12161 HsdM N-terminal domain GRF56_RS10530 PF02384 N-6 DNA Methylase GRF56_RS10550 PF18766 SWI2/SNF2 ATPase GRF56_RS10550 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GRF56_RS10550 PF11867 Domain of unknown function (DUF3387) GRF56_RS10565 PF00665 Integrase core domain GRF56_RS10610 PF00176 SNF2 family N-terminal domain GRF56_RS10610 PF12419 SNF2 Helicase protein GRF56_RS10610 PF00271 Helicase conserved C-terminal domain GRF56_RS10620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS10620 PF08447 PAS fold GRF56_RS10640 PF00324 Amino acid permease GRF56_RS10650 PF03618 Kinase/pyrophosphorylase GRF56_RS10655 PF00391 PEP-utilising enzyme, mobile domain GRF56_RS10655 PF02896 PEP-utilising enzyme, TIM barrel domain GRF56_RS10655 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GRF56_RS10665 PF01483 Proprotein convertase P-domain GRF56_RS10665 PF00082 Subtilase family GRF56_RS10670 PF03180 NLPA lipoprotein GRF56_RS10675 PF11893 Domain of unknown function (DUF3413) GRF56_RS10675 PF00884 Sulfatase GRF56_RS10680 PF07208 Protein of unknown function (DUF1414) GRF56_RS10685 PF04245 37-kD nucleoid-associated bacterial protein GRF56_RS10690 PF01547 Bacterial extracellular solute-binding protein GRF56_RS10695 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS10695 PF14785 Maltose transport system permease protein MalF P2 domain GRF56_RS10700 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS10705 PF08402 TOBE domain GRF56_RS10705 PF00005 ABC transporter GRF56_RS10710 PF03976 Polyphosphate kinase 2 (PPK2) GRF56_RS10715 PF00561 alpha/beta hydrolase fold GRF56_RS10725 PF01594 AI-2E family transporter GRF56_RS10730 PF01206 Sulfurtransferase TusA GRF56_RS10735 PF01435 Peptidase family M48 GRF56_RS10735 PF07720 Tetratricopeptide repeat GRF56_RS10740 PF00578 AhpC/TSA family GRF56_RS10745 PF03960 ArsC family GRF56_RS10755 PF04336 Acyl carrier protein phosphodiesterase GRF56_RS10760 PF00497 Bacterial extracellular solute-binding proteins, family 3 GRF56_RS10765 PF01979 Amidohydrolase family GRF56_RS10770 PF03956 Lysine exporter LysO GRF56_RS10775 PF00005 ABC transporter GRF56_RS10780 PF00497 Bacterial extracellular solute-binding proteins, family 3 GRF56_RS10785 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS10790 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS10805 PF00849 RNA pseudouridylate synthase GRF56_RS10815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GRF56_RS10820 PF04209 homogentisate 1,2-dioxygenase GRF56_RS10830 PF14497 Glutathione S-transferase, C-terminal domain GRF56_RS10830 PF02798 Glutathione S-transferase, N-terminal domain GRF56_RS10835 PF03577 Peptidase family C69 GRF56_RS10840 PF01546 Peptidase family M20/M25/M40 GRF56_RS10840 PF07687 Peptidase dimerisation domain GRF56_RS10845 PF03606 C4-dicarboxylate anaerobic carrier GRF56_RS10855 PF00733 Asparagine synthase GRF56_RS10855 PF13537 Glutamine amidotransferase domain GRF56_RS10865 PF00999 Sodium/hydrogen exchanger family GRF56_RS10865 PF02254 TrkA-N domain GRF56_RS10870 PF13344 Haloacid dehalogenase-like hydrolase GRF56_RS10875 PF00962 Adenosine/AMP deaminase GRF56_RS10880 PF00107 Zinc-binding dehydrogenase GRF56_RS10880 PF08240 Alcohol dehydrogenase GroES-like domain GRF56_RS10885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GRF56_RS10890 PF03741 Integral membrane protein TerC family GRF56_RS10890 PF03471 Transporter associated domain GRF56_RS10900 PF02913 FAD linked oxidases, C-terminal domain GRF56_RS10900 PF01565 FAD binding domain GRF56_RS10900 PF13183 4Fe-4S dicluster domain GRF56_RS10910 PF03061 Thioesterase superfamily GRF56_RS10915 PF03880 DbpA RNA binding domain GRF56_RS10915 PF00271 Helicase conserved C-terminal domain GRF56_RS10915 PF00270 DEAD/DEAH box helicase GRF56_RS10925 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS10925 PF03707 Bacterial signalling protein N terminal repeat GRF56_RS10925 PF13188 PAS domain GRF56_RS10925 PF00563 EAL domain GRF56_RS10930 PF03553 Na+/H+ antiporter family GRF56_RS10930 PF13726 Na+-H+ antiporter family GRF56_RS10935 PF00929 Exonuclease GRF56_RS10940 PF01569 PAP2 superfamily GRF56_RS10945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GRF56_RS10945 PF11890 Domain of unknown function (DUF3410) GRF56_RS10945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GRF56_RS10950 PF01118 Semialdehyde dehydrogenase, NAD binding domain GRF56_RS10950 PF02774 Semialdehyde dehydrogenase, dimerisation domain GRF56_RS10960 PF01416 tRNA pseudouridine synthase GRF56_RS10965 PF17848 Acetyl-coA carboxylase zinc finger domain GRF56_RS10965 PF01039 Carboxyl transferase domain GRF56_RS10970 PF02875 Mur ligase family, glutamate ligase domain GRF56_RS10970 PF08245 Mur ligase middle domain GRF56_RS10975 PF05036 Sporulation related domain GRF56_RS10980 PF01906 Putative heavy-metal-binding GRF56_RS10990 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GRF56_RS10990 PF14824 Sirohaem biosynthesis protein central GRF56_RS10990 PF10414 Sirohaem synthase dimerisation region GRF56_RS10995 PF13187 4Fe-4S dicluster domain GRF56_RS10995 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GRF56_RS10995 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GRF56_RS11000 PF00175 Oxidoreductase NAD-binding domain GRF56_RS11000 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B GRF56_RS11005 PF17179 4Fe-4S dicluster domain GRF56_RS11010 PF01734 Patatin-like phospholipase GRF56_RS11015 PF02016 LD-carboxypeptidase N-terminal domain GRF56_RS11015 PF17676 LD-carboxypeptidase C-terminal domain GRF56_RS11020 PF00884 Sulfatase GRF56_RS11030 PF00696 Amino acid kinase family GRF56_RS11030 PF01842 ACT domain GRF56_RS11035 PF00583 Acetyltransferase (GNAT) family GRF56_RS11035 PF00696 Amino acid kinase family GRF56_RS11040 PF01625 Peptide methionine sulfoxide reductase GRF56_RS11060 PF00561 alpha/beta hydrolase fold GRF56_RS11075 PF02308 MgtC family GRF56_RS11090 PF00005 ABC transporter GRF56_RS11100 PF03600 Citrate transporter GRF56_RS11105 PF07690 Major Facilitator Superfamily GRF56_RS11120 PF01593 Flavin containing amine oxidoreductase GRF56_RS11125 PF03239 Iron permease FTR1 family GRF56_RS11140 PF03350 Uncharacterized protein family, UPF0114 GRF56_RS11160 PF00916 Sulfate permease family GRF56_RS11160 PF01740 STAS domain GRF56_RS11175 PF09924 Uncharacterised conserved protein (DUF2156) GRF56_RS11175 PF03706 Lysylphosphatidylglycerol synthase TM region GRF56_RS11185 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS11185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS11185 PF00672 HAMP domain GRF56_RS11190 PF00072 Response regulator receiver domain GRF56_RS11190 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS11210 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GRF56_RS11210 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GRF56_RS11215 PF00313 'Cold-shock' DNA-binding domain GRF56_RS11220 PF02617 ATP-dependent Clp protease adaptor protein ClpS GRF56_RS11225 PF17871 AAA lid domain GRF56_RS11225 PF10431 C-terminal, D2-small domain, of ClpB protein GRF56_RS11225 PF07724 AAA domain (Cdc48 subfamily) GRF56_RS11225 PF00004 ATPase family associated with various cellular activities (AAA) GRF56_RS11225 PF02861 Clp amino terminal domain, pathogenicity island component GRF56_RS11230 PF01176 Translation initiation factor 1A / IF-1 GRF56_RS11235 PF04376 Arginine-tRNA-protein transferase, N terminus GRF56_RS11235 PF04377 Arginine-tRNA-protein transferase, C terminus GRF56_RS11240 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GRF56_RS11245 PF05433 Glycine zipper 2TM domain GRF56_RS11250 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS11250 PF17158 Membrane-associated sensor, integral membrane domain GRF56_RS11255 PF07992 Pyridine nucleotide-disulphide oxidoreductase GRF56_RS11260 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GRF56_RS11260 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GRF56_RS11265 PF01037 Lrp/AsnC ligand binding domain GRF56_RS11270 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GRF56_RS11270 PF09397 Ftsk gamma domain GRF56_RS11270 PF17854 FtsK alpha domain GRF56_RS11270 PF01580 FtsK/SpoIIIE family GRF56_RS11275 PF03548 Outer membrane lipoprotein carrier protein LolA GRF56_RS11280 PF00004 ATPase family associated with various cellular activities (AAA) GRF56_RS11280 PF16193 AAA C-terminal domain GRF56_RS11280 PF12002 MgsA AAA+ ATPase C terminal GRF56_RS11285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GRF56_RS11285 PF02403 Seryl-tRNA synthetase N-terminal domain GRF56_RS11290 PF02674 Colicin V production protein GRF56_RS11295 PF00156 Phosphoribosyl transferase domain GRF56_RS11300 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) GRF56_RS11305 PF05191 Adenylate kinase, active site lid GRF56_RS11310 PF00762 Ferrochelatase GRF56_RS11320 PF00294 pfkB family carbohydrate kinase GRF56_RS11335 PF00563 EAL domain GRF56_RS11335 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS11335 PF03707 Bacterial signalling protein N terminal repeat GRF56_RS11340 PF00483 Nucleotidyl transferase GRF56_RS11350 PF07273 Protein of unknown function (DUF1439) GRF56_RS11360 PF11143 Protein of unknown function (DUF2919) GRF56_RS11365 PF01544 CorA-like Mg2+ transporter protein GRF56_RS11375 PF01012 Electron transfer flavoprotein domain GRF56_RS11380 PF00766 Electron transfer flavoprotein FAD-binding domain GRF56_RS11380 PF01012 Electron transfer flavoprotein domain GRF56_RS11385 PF00266 Aminotransferase class-V GRF56_RS11390 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GRF56_RS11395 PF00793 DAHP synthetase I family GRF56_RS11400 PF00672 HAMP domain GRF56_RS11400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS11405 PF04055 Radical SAM superfamily GRF56_RS11410 PF00270 DEAD/DEAH box helicase GRF56_RS11410 PF00271 Helicase conserved C-terminal domain GRF56_RS11415 PF00255 Glutathione peroxidase GRF56_RS11425 PF01820 D-ala D-ala ligase N-terminus GRF56_RS11425 PF07478 D-ala D-ala ligase C-terminus GRF56_RS11430 PF07748 Glycosyl hydrolases family 38 C-terminal domain GRF56_RS11430 PF09261 Alpha mannosidase middle domain GRF56_RS11430 PF01074 Glycosyl hydrolases family 38 N-terminal domain GRF56_RS11435 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GRF56_RS11435 PF02378 Phosphotransferase system, EIIC GRF56_RS11435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GRF56_RS11440 PF07702 UTRA domain GRF56_RS11440 PF00392 Bacterial regulatory proteins, gntR family GRF56_RS11445 PF13742 OB-fold nucleic acid binding domain GRF56_RS11445 PF02601 Exonuclease VII, large subunit GRF56_RS11450 PF01292 Prokaryotic cytochrome b561 GRF56_RS11455 PF00571 CBS domain GRF56_RS11455 PF00478 IMP dehydrogenase / GMP reductase domain GRF56_RS11460 PF00958 GMP synthase C terminal domain GRF56_RS11460 PF00117 Glutamine amidotransferase class-I GRF56_RS11460 PF02540 NAD synthase GRF56_RS11475 PF00360 Phytochrome region GRF56_RS11475 PF00563 EAL domain GRF56_RS11475 PF01590 GAF domain GRF56_RS11475 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS11485 PF00072 Response regulator receiver domain GRF56_RS11495 PF01627 Hpt domain GRF56_RS11495 PF00072 Response regulator receiver domain GRF56_RS11495 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GRF56_RS11495 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS11495 PF00672 HAMP domain GRF56_RS11495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS11500 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GRF56_RS11500 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal GRF56_RS11505 PF13247 4Fe-4S dicluster domain GRF56_RS11510 PF03916 Polysulphide reductase, NrfD GRF56_RS11515 PF00374 Nickel-dependent hydrogenase GRF56_RS11520 PF01750 Hydrogenase maturation protease GRF56_RS11525 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE GRF56_RS11530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GRF56_RS11535 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS11540 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS11540 PF12911 N-terminal TM domain of oligopeptide transport permease C GRF56_RS11545 PF00005 ABC transporter GRF56_RS11545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GRF56_RS11550 PF00005 ABC transporter GRF56_RS11555 PF02492 CobW/HypB/UreG, nucleotide-binding domain GRF56_RS11560 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA GRF56_RS11565 PF00586 AIR synthase related protein, N-terminal domain GRF56_RS11565 PF02769 AIR synthase related protein, C-terminal domain GRF56_RS11570 PF01924 Hydrogenase formation hypA family GRF56_RS11575 PF01455 HupF/HypC family GRF56_RS11580 PF07503 HypF finger GRF56_RS11580 PF00708 Acylphosphatase GRF56_RS11580 PF01300 Telomere recombination GRF56_RS11580 PF17788 HypF Kae1-like domain GRF56_RS11585 PF09107 Elongation factor SelB, winged helix GRF56_RS11585 PF09106 Elongation factor SelB, winged helix GRF56_RS11585 PF09105 Elongation factor SelB, winged helix GRF56_RS11585 PF03144 Elongation factor Tu domain 2 GRF56_RS11585 PF00009 Elongation factor Tu GTP binding domain GRF56_RS11590 PF03841 L-seryl-tRNA selenium transferase GRF56_RS11590 PF12390 Selenocysteine synthase N terminal GRF56_RS11600 PF01750 Hydrogenase maturation protease GRF56_RS11605 PF07450 Formate hydrogenlyase maturation protein HycH GRF56_RS11610 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GRF56_RS11615 PF12838 4Fe-4S dicluster domain GRF56_RS11620 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GRF56_RS11620 PF00374 Nickel-dependent hydrogenase GRF56_RS11620 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GRF56_RS11625 PF00146 NADH dehydrogenase GRF56_RS11630 PF00361 Proton-conducting membrane transporter GRF56_RS11635 PF12798 4Fe-4S binding domain GRF56_RS11635 PF00037 4Fe-4S binding domain GRF56_RS11640 PF02705 K+ potassium transporter GRF56_RS11650 PF13247 4Fe-4S dicluster domain GRF56_RS11650 PF12800 4Fe-4S binding domain GRF56_RS11665 PF00158 Sigma-54 interaction domain GRF56_RS11665 PF02954 Bacterial regulatory protein, Fis family GRF56_RS11665 PF01590 GAF domain GRF56_RS11670 PF02634 FdhD/NarQ family GRF56_RS11675 PF02774 Semialdehyde dehydrogenase, dimerisation domain GRF56_RS11675 PF01118 Semialdehyde dehydrogenase, NAD binding domain GRF56_RS11685 PF01266 FAD dependent oxidoreductase GRF56_RS11690 PF04244 Deoxyribodipyrimidine photo-lyase-related protein GRF56_RS11700 PF01212 Beta-eliminating lyase GRF56_RS11705 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region GRF56_RS11705 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GRF56_RS11710 PF04172 LrgB-like family GRF56_RS11715 PF03788 LrgA family GRF56_RS11730 PF00929 Exonuclease GRF56_RS11730 PF08411 Exonuclease C-terminal GRF56_RS11735 PF13356 Arm DNA-binding domain GRF56_RS11735 PF14659 Phage integrase, N-terminal SAM-like domain GRF56_RS11735 PF00589 Phage integrase family GRF56_RS11775 PF00717 Peptidase S24-like GRF56_RS11775 PF01381 Helix-turn-helix GRF56_RS11890 PF11799 impB/mucB/samB family C-terminal domain GRF56_RS11890 PF00817 impB/mucB/samB family GRF56_RS11890 PF13438 Domain of unknown function (DUF4113) GRF56_RS11925 PF01555 DNA methylase GRF56_RS11930 PF00004 ATPase family associated with various cellular activities (AAA) GRF56_RS11965 PF03354 Phage Terminase GRF56_RS11980 PF01343 Peptidase family S49 GRF56_RS12070 PF04055 Radical SAM superfamily GRF56_RS12070 PF13186 Iron-sulfur cluster-binding domain GRF56_RS12080 PF03781 Sulfatase-modifying factor enzyme 1 GRF56_RS12085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS12085 PF03466 LysR substrate binding domain GRF56_RS12095 PF07584 Aerotolerance regulator N-terminal GRF56_RS12095 PF13519 von Willebrand factor type A domain GRF56_RS12100 PF07584 Aerotolerance regulator N-terminal GRF56_RS12100 PF13519 von Willebrand factor type A domain GRF56_RS12115 PF17863 AAA lid domain GRF56_RS12115 PF07726 ATPase family associated with various cellular activities (AAA) GRF56_RS12120 PF00884 Sulfatase GRF56_RS12125 PF01966 HD domain GRF56_RS12135 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GRF56_RS12135 PF00270 DEAD/DEAH box helicase GRF56_RS12135 PF11898 Domain of unknown function (DUF3418) GRF56_RS12135 PF04408 Helicase associated domain (HA2) GRF56_RS12135 PF00271 Helicase conserved C-terminal domain GRF56_RS12145 PF01386 Ribosomal L25p family GRF56_RS12150 PF00376 MerR family regulatory protein GRF56_RS12150 PF09278 MerR, DNA binding GRF56_RS12155 PF00108 Thiolase, N-terminal domain GRF56_RS12155 PF02803 Thiolase, C-terminal domain GRF56_RS12160 PF00563 EAL domain GRF56_RS12160 PF08668 HDOD domain GRF56_RS12165 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GRF56_RS12170 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GRF56_RS12180 PF08281 Sigma-70, region 4 GRF56_RS12180 PF04542 Sigma-70 region 2 GRF56_RS12190 PF13519 von Willebrand factor type A domain GRF56_RS12205 PF01882 Protein of unknown function DUF58 GRF56_RS12210 PF17863 AAA lid domain GRF56_RS12210 PF07726 ATPase family associated with various cellular activities (AAA) GRF56_RS12215 PF02803 Thiolase, C-terminal domain GRF56_RS12215 PF00108 Thiolase, N-terminal domain GRF56_RS12220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GRF56_RS12220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GRF56_RS12220 PF00378 Enoyl-CoA hydratase/isomerase GRF56_RS12225 PF04293 SpoVR like protein GRF56_RS12230 PF04285 Protein of unknown function (DUF444) GRF56_RS12235 PF08298 PrkA AAA domain GRF56_RS12235 PF06798 PrkA serine protein kinase C-terminal domain GRF56_RS12240 PF09382 RQC domain GRF56_RS12240 PF00270 DEAD/DEAH box helicase GRF56_RS12240 PF00271 Helicase conserved C-terminal domain GRF56_RS12240 PF16124 RecQ zinc-binding GRF56_RS12240 PF00570 HRDC domain GRF56_RS12245 PF00375 Sodium:dicarboxylate symporter family GRF56_RS12255 PF03222 Tryptophan/tyrosine permease family GRF56_RS12260 PF00293 NUDIX domain GRF56_RS12265 PF04715 Anthranilate synthase component I, N terminal region GRF56_RS12265 PF00425 chorismate binding enzyme GRF56_RS12275 PF08274 PhnA Zinc-Ribbon GRF56_RS12275 PF03831 PhnA domain GRF56_RS12285 PF08329 Chitinase A, N-terminal domain GRF56_RS12285 PF00704 Glycosyl hydrolases family 18 GRF56_RS12290 PF00300 Histidine phosphatase superfamily (branch 1) GRF56_RS12295 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS12295 PF08448 PAS fold GRF56_RS12300 PF01713 Smr domain GRF56_RS12305 PF05175 Methyltransferase small domain GRF56_RS12310 PF01264 Chorismate synthase GRF56_RS12320 PF00270 DEAD/DEAH box helicase GRF56_RS12320 PF00271 Helicase conserved C-terminal domain GRF56_RS12330 PF01124 MAPEG family GRF56_RS12340 PF03222 Tryptophan/tyrosine permease family GRF56_RS12345 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GRF56_RS12345 PF00356 Bacterial regulatory proteins, lacI family GRF56_RS12350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GRF56_RS12350 PF00381 PTS HPr component phosphorylation site GRF56_RS12355 PF00294 pfkB family carbohydrate kinase GRF56_RS12360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GRF56_RS12360 PF02378 Phosphotransferase system, EIIC GRF56_RS12365 PF06945 Protein of unknown function (DUF1289) GRF56_RS12370 PF06725 3D domain GRF56_RS12370 PF03562 MltA specific insert domain GRF56_RS12375 PF00111 2Fe-2S iron-sulfur cluster binding domain GRF56_RS12380 PF00268 Ribonucleotide reductase, small chain GRF56_RS12385 PF00317 Ribonucleotide reductase, all-alpha domain GRF56_RS12385 PF02867 Ribonucleotide reductase, barrel domain GRF56_RS12385 PF03477 ATP cone domain GRF56_RS12390 PF13419 Haloacid dehalogenase-like hydrolase GRF56_RS12400 PF03989 DNA gyrase C-terminal domain, beta-propeller GRF56_RS12400 PF00521 DNA gyrase/topoisomerase IV, subunit A GRF56_RS12405 PF00128 Alpha amylase, catalytic domain GRF56_RS12410 PF04055 Radical SAM superfamily GRF56_RS12420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GRF56_RS12420 PF02824 TGS domain GRF56_RS12420 PF03129 Anticodon binding domain GRF56_RS12420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GRF56_RS12425 PF00707 Translation initiation factor IF-3, C-terminal domain GRF56_RS12425 PF05198 Translation initiation factor IF-3, N-terminal domain GRF56_RS12430 PF01632 Ribosomal protein L35 GRF56_RS12435 PF00453 Ribosomal protein L20 GRF56_RS12440 PF01409 tRNA synthetases class II core domain (F) GRF56_RS12440 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GRF56_RS12445 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GRF56_RS12445 PF01588 Putative tRNA binding domain GRF56_RS12445 PF03147 Ferredoxin-fold anticodon binding domain GRF56_RS12445 PF03484 tRNA synthetase B5 domain GRF56_RS12445 PF03483 B3/4 domain GRF56_RS12450 PF00216 Bacterial DNA-binding protein GRF56_RS12455 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS12455 PF09456 RcsC Alpha-Beta-Loop (ABL) GRF56_RS12455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS12455 PF00072 Response regulator receiver domain GRF56_RS12470 PF02146 Sir2 family GRF56_RS12480 PF17152 Periplasmic sensor domain GRF56_RS12480 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS12485 PF00356 Bacterial regulatory proteins, lacI family GRF56_RS12490 PF00294 pfkB family carbohydrate kinase GRF56_RS12495 PF13407 Periplasmic binding protein domain GRF56_RS12500 PF02653 Branched-chain amino acid transport system / permease component GRF56_RS12505 PF00005 ABC transporter GRF56_RS12510 PF05025 RbsD / FucU transport protein family GRF56_RS12515 PF00043 Glutathione S-transferase, C-terminal domain GRF56_RS12515 PF02798 Glutathione S-transferase, N-terminal domain GRF56_RS12525 PF13416 Bacterial extracellular solute-binding protein GRF56_RS12530 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS12535 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS12540 PF00005 ABC transporter GRF56_RS12540 PF08402 TOBE domain GRF56_RS12555 PF01171 PP-loop family GRF56_RS12560 PF00582 Universal stress protein family GRF56_RS12565 PF13545 Crp-like helix-turn-helix domain GRF56_RS12565 PF00027 Cyclic nucleotide-binding domain GRF56_RS12580 PF00403 Heavy-metal-associated domain GRF56_RS12590 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GRF56_RS12590 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP GRF56_RS12605 PF00115 Cytochrome C and Quinol oxidase polypeptide I GRF56_RS12615 PF13185 GAF domain GRF56_RS12620 PF04352 ProQ/FINO family GRF56_RS12620 PF17516 ProQ C-terminal domain GRF56_RS12625 PF03572 Peptidase family S41 GRF56_RS12625 PF17804 Tail specific protease N-terminal domain GRF56_RS12625 PF00595 PDZ domain GRF56_RS12625 PF11818 C-terminal domain of tail specific protease (DUF3340) GRF56_RS12630 PF01433 Peptidase family M1 domain GRF56_RS12630 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GRF56_RS12630 PF11940 Domain of unknown function (DUF3458) Ig-like fold GRF56_RS12640 PF05088 Bacterial NAD-glutamate dehydrogenase GRF56_RS12645 PF01180 Dihydroorotate dehydrogenase GRF56_RS12650 PF07126 Cell-division protein ZapC GRF56_RS12660 PF01197 Ribosomal protein L31 GRF56_RS12665 PF00444 Ribosomal protein L36 GRF56_RS12670 PF01170 Putative RNA methylase family UPF0020 GRF56_RS12670 PF02926 THUMP domain GRF56_RS12670 PF10672 S-adenosylmethionine-dependent methyltransferase GRF56_RS12685 PF04957 Ribosome modulation factor GRF56_RS12690 PF07977 FabA-like domain GRF56_RS12695 PF05362 Lon protease (S16) C-terminal proteolytic domain GRF56_RS12695 PF13654 AAA domain GRF56_RS12725 PF07130 YebG protein GRF56_RS12730 PF01674 Lipase (class 2) GRF56_RS12735 PF00106 short chain dehydrogenase GRF56_RS12760 PF06974 Protein of unknown function (DUF1298) GRF56_RS12760 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain GRF56_RS12775 PF03972 MmgE/PrpD family GRF56_RS12780 PF00285 Citrate synthase, C-terminal domain GRF56_RS12790 PF04403 Paraquat-inducible protein A GRF56_RS12795 PF04403 Paraquat-inducible protein A GRF56_RS12800 PF02470 MlaD protein GRF56_RS12805 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF GRF56_RS12805 PF01189 16S rRNA methyltransferase RsmB/F GRF56_RS12805 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF GRF56_RS12815 PF00589 Phage integrase family GRF56_RS12820 PF01026 TatD related DNase GRF56_RS12825 PF09115 DNA polymerase III, delta subunit, C terminal GRF56_RS12830 PF02223 Thymidylate kinase GRF56_RS12835 PF02618 YceG-like family GRF56_RS12840 PF01063 Amino-transferase class IV GRF56_RS12845 PF02801 Beta-ketoacyl synthase, C-terminal domain GRF56_RS12845 PF00109 Beta-ketoacyl synthase, N-terminal domain GRF56_RS12850 PF00550 Phosphopantetheine attachment site GRF56_RS12860 PF00698 Acyl transferase domain GRF56_RS12865 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GRF56_RS12865 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GRF56_RS12870 PF02504 Fatty acid synthesis protein GRF56_RS12875 PF01783 Ribosomal L32p protein family GRF56_RS12880 PF02620 Large ribosomal RNA subunit accumulation protein YceD GRF56_RS12885 PF02545 Maf-like protein GRF56_RS12890 PF13419 Haloacid dehalogenase-like hydrolase GRF56_RS12895 PF01479 S4 domain GRF56_RS12895 PF00849 RNA pseudouridylate synthase GRF56_RS12900 PF12111 Polyribonucleotide phosphorylase C terminal GRF56_RS12900 PF10150 Ribonuclease E/G family GRF56_RS12900 PF00575 S1 RNA binding domain GRF56_RS12910 PF01384 Phosphate transporter family GRF56_RS12915 PF00692 dUTPase GRF56_RS12920 PF00485 Phosphoribulokinase / Uridine kinase family GRF56_RS12925 PF10609 NUBPL iron-transfer P-loop NTPase GRF56_RS12930 PF08264 Anticodon-binding domain of tRNA GRF56_RS12930 PF01588 Putative tRNA binding domain GRF56_RS12930 PF09334 tRNA synthetases class I (M) GRF56_RS12940 PF00708 Acylphosphatase GRF56_RS12945 PF12729 Four helix bundle sensory module for signal transduction GRF56_RS12945 PF00672 HAMP domain GRF56_RS12945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS12950 PF17785 PUA-like domain GRF56_RS12950 PF10672 S-adenosylmethionine-dependent methyltransferase GRF56_RS12965 PF02769 AIR synthase related protein, C-terminal domain GRF56_RS12965 PF00586 AIR synthase related protein, N-terminal domain GRF56_RS12975 PF00753 Metallo-beta-lactamase superfamily GRF56_RS12980 PF00570 HRDC domain GRF56_RS12980 PF01612 3'-5' exonuclease GRF56_RS12985 PF13193 AMP-binding enzyme C-terminal domain GRF56_RS12985 PF00501 AMP-binding enzyme GRF56_RS12990 PF12697 Alpha/beta hydrolase family GRF56_RS13000 PF00814 Glycoprotease family GRF56_RS13005 PF04851 Type III restriction enzyme, res subunit GRF56_RS13005 PF13307 Helicase C-terminal domain GRF56_RS13015 PF08029 HisG, C-terminal domain GRF56_RS13015 PF01634 ATP phosphoribosyltransferase GRF56_RS13020 PF00815 Histidinol dehydrogenase GRF56_RS13025 PF00155 Aminotransferase class I and II GRF56_RS13030 PF08645 Polynucleotide kinase 3 phosphatase GRF56_RS13030 PF00475 Imidazoleglycerol-phosphate dehydratase GRF56_RS13035 PF00117 Glutamine amidotransferase class-I GRF56_RS13040 PF00977 Histidine biosynthesis protein GRF56_RS13045 PF00977 Histidine biosynthesis protein GRF56_RS13050 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GRF56_RS13050 PF01502 Phosphoribosyl-AMP cyclohydrolase GRF56_RS13060 PF07694 5TMR of 5TMR-LYT GRF56_RS13060 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS13065 PF13193 AMP-binding enzyme C-terminal domain GRF56_RS13065 PF00501 AMP-binding enzyme GRF56_RS13070 PF03606 C4-dicarboxylate anaerobic carrier GRF56_RS13080 PF05433 Glycine zipper 2TM domain GRF56_RS13085 PF01799 [2Fe-2S] binding domain GRF56_RS13085 PF00111 2Fe-2S iron-sulfur cluster binding domain GRF56_RS13090 PF03450 CO dehydrogenase flavoprotein C-terminal domain GRF56_RS13090 PF00941 FAD binding domain in molybdopterin dehydrogenase GRF56_RS13095 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GRF56_RS13095 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GRF56_RS13100 PF00860 Permease family GRF56_RS13105 PF01979 Amidohydrolase family GRF56_RS13110 PF00860 Permease family GRF56_RS13115 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GRF56_RS13115 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GRF56_RS13115 PF01799 [2Fe-2S] binding domain GRF56_RS13120 PF00941 FAD binding domain in molybdopterin dehydrogenase GRF56_RS13125 PF01979 Amidohydrolase family GRF56_RS13130 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GRF56_RS13130 PF07992 Pyridine nucleotide-disulphide oxidoreductase GRF56_RS13140 PF12804 MobA-like NTP transferase domain GRF56_RS13150 PF13478 XdhC Rossmann domain GRF56_RS13150 PF02625 XdhC and CoxI family GRF56_RS13155 PF00892 EamA-like transporter family GRF56_RS13160 PF00696 Amino acid kinase family GRF56_RS13165 PF01979 Amidohydrolase family GRF56_RS13170 PF07687 Peptidase dimerisation domain GRF56_RS13170 PF01546 Peptidase family M20/M25/M40 GRF56_RS13175 PF00291 Pyridoxal-phosphate dependent enzyme GRF56_RS13180 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GRF56_RS13180 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GRF56_RS13215 PF01327 Polypeptide deformylase GRF56_RS13230 PF03330 Lytic transglycolase GRF56_RS13235 PF04310 MukB N-terminal GRF56_RS13235 PF16330 MukB hinge domain GRF56_RS13240 PF04288 MukE-like family GRF56_RS13245 PF03882 MukF winged-helix domain GRF56_RS13245 PF17193 MukF C-terminal domain GRF56_RS13245 PF17192 MukF middle domain GRF56_RS13255 PF02698 DUF218 domain GRF56_RS13260 PF00121 Triosephosphate isomerase GRF56_RS13265 PF00365 Phosphofructokinase GRF56_RS13270 PF00375 Sodium:dicarboxylate symporter family GRF56_RS13275 PF06865 Pyrimidine/purine nucleoside phosphorylase GRF56_RS13280 PF03313 Serine dehydratase alpha chain GRF56_RS13280 PF03315 Serine dehydratase beta chain GRF56_RS13285 PF03315 Serine dehydratase beta chain GRF56_RS13285 PF03313 Serine dehydratase alpha chain GRF56_RS13290 PF05166 YcgL domain GRF56_RS13295 PF03775 Septum formation inhibitor MinC, C-terminal domain GRF56_RS13295 PF05209 Septum formation inhibitor MinC, N-terminal domain GRF56_RS13300 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GRF56_RS13305 PF03776 Septum formation topological specificity factor MinE GRF56_RS13310 PF04269 Protein of unknown function, DUF440 GRF56_RS13315 PF00912 Transglycosylase GRF56_RS13320 PF04269 Protein of unknown function, DUF440 GRF56_RS13330 PF17783 CvfB-like winged helix domain GRF56_RS13330 PF13509 S1 domain GRF56_RS13355 PF02525 Flavodoxin-like fold GRF56_RS13360 PF00892 EamA-like transporter family GRF56_RS13365 PF01370 NAD dependent epimerase/dehydratase family GRF56_RS13365 PF02222 ATP-grasp domain GRF56_RS13370 PF13419 Haloacid dehalogenase-like hydrolase GRF56_RS13380 PF00677 Lumazine binding domain GRF56_RS13390 PF06786 Uncharacterised protein family (UPF0253) GRF56_RS13395 PF01554 MatE GRF56_RS13440 PF07152 YaeQ protein GRF56_RS13450 PF07840 FadR C-terminal domain GRF56_RS13450 PF00392 Bacterial regulatory proteins, gntR family GRF56_RS13455 PF06450 Bacterial Na+/H+ antiporter B (NhaB) GRF56_RS13460 PF02600 Disulfide bond formation protein DsbB GRF56_RS13465 PF09335 SNARE associated Golgi protein GRF56_RS13475 PF12344 Ultra-violet resistance protein B GRF56_RS13475 PF02151 UvrB/uvrC motif GRF56_RS13475 PF04851 Type III restriction enzyme, res subunit GRF56_RS13475 PF00271 Helicase conserved C-terminal domain GRF56_RS13475 PF17757 UvrB interaction domain GRF56_RS13490 PF02080 TrkA-C domain GRF56_RS13490 PF06826 Predicted Permease Membrane Region GRF56_RS13495 PF02801 Beta-ketoacyl synthase, C-terminal domain GRF56_RS13495 PF00109 Beta-ketoacyl synthase, N-terminal domain GRF56_RS13500 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GRF56_RS13500 PF01266 FAD dependent oxidoreductase GRF56_RS13515 PF03606 C4-dicarboxylate anaerobic carrier GRF56_RS13530 PF01863 Protein of unknown function DUF45 GRF56_RS13545 PF00136 DNA polymerase family B GRF56_RS13545 PF03104 DNA polymerase family B, exonuclease domain GRF56_RS13555 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS13570 PF03279 Bacterial lipid A biosynthesis acyltransferase GRF56_RS13575 PF03279 Bacterial lipid A biosynthesis acyltransferase GRF56_RS13585 PF03466 LysR substrate binding domain GRF56_RS13585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS13590 PF01261 Xylose isomerase-like TIM barrel GRF56_RS13595 PF02575 YbaB/EbfC DNA-binding family GRF56_RS13600 PF12170 DNA polymerase III tau subunit V interacting with alpha GRF56_RS13600 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GRF56_RS13600 PF12169 DNA polymerase III subunits gamma and tau domain III GRF56_RS13605 PF00156 Phosphoribosyl transferase domain GRF56_RS13610 PF04304 Protein of unknown function (DUF454) GRF56_RS13615 PF01207 Dihydrouridine synthase (Dus) GRF56_RS13630 PF13419 Haloacid dehalogenase-like hydrolase GRF56_RS13635 PF02789 Cytosol aminopeptidase family, N-terminal domain GRF56_RS13635 PF00883 Cytosol aminopeptidase family, catalytic domain GRF56_RS13675 PF00128 Alpha amylase, catalytic domain GRF56_RS13675 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GRF56_RS13685 PF11398 Protein of unknown function (DUF2813) GRF56_RS13690 PF14525 AraC-binding-like domain GRF56_RS13690 PF12833 Helix-turn-helix domain GRF56_RS13700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS13700 PF03466 LysR substrate binding domain GRF56_RS13705 PF01925 Sulfite exporter TauE/SafE GRF56_RS13715 PF00480 ROK family GRF56_RS13715 PF01047 MarR family GRF56_RS13720 PF00672 HAMP domain GRF56_RS13720 PF17200 Single Cache domain 2 GRF56_RS13720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS13725 PF02810 SEC-C motif GRF56_RS13730 PF01266 FAD dependent oxidoreductase GRF56_RS13730 PF04324 BFD-like [2Fe-2S] binding domain GRF56_RS13735 PF00890 FAD binding domain GRF56_RS13740 PF02754 Cysteine-rich domain GRF56_RS13740 PF13183 4Fe-4S dicluster domain GRF56_RS13745 PF02335 Cytochrome c552 GRF56_RS13750 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) GRF56_RS13750 PF13435 Cytochrome c554 and c-prime GRF56_RS13755 PF00037 4Fe-4S binding domain GRF56_RS13755 PF13247 4Fe-4S dicluster domain GRF56_RS13760 PF03916 Polysulphide reductase, NrfD GRF56_RS13765 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GRF56_RS13765 PF01578 Cytochrome C assembly protein GRF56_RS13770 PF08534 Redoxin GRF56_RS13775 PF03918 Cytochrome C biogenesis protein GRF56_RS13795 PF00202 Aminotransferase class-III GRF56_RS13800 PF00266 Aminotransferase class-V GRF56_RS13805 PF00392 Bacterial regulatory proteins, gntR family GRF56_RS13805 PF07702 UTRA domain GRF56_RS13815 PF00005 ABC transporter GRF56_RS13820 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS13825 PF01266 FAD dependent oxidoreductase GRF56_RS13840 PF00549 CoA-ligase GRF56_RS13840 PF02629 CoA binding domain GRF56_RS13845 PF00549 CoA-ligase GRF56_RS13845 PF08442 ATP-grasp domain GRF56_RS13850 PF02817 e3 binding domain GRF56_RS13850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GRF56_RS13850 PF00364 Biotin-requiring enzyme GRF56_RS13855 PF00676 Dehydrogenase E1 component GRF56_RS13855 PF16870 2-oxoglutarate dehydrogenase C-terminal GRF56_RS13855 PF16078 2-oxoglutarate dehydrogenase N-terminus GRF56_RS13855 PF02779 Transketolase, pyrimidine binding domain GRF56_RS13860 PF13085 2Fe-2S iron-sulfur cluster binding domain GRF56_RS13865 PF00890 FAD binding domain GRF56_RS13865 PF02910 Fumarate reductase flavoprotein C-term GRF56_RS13870 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GRF56_RS13875 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GRF56_RS13885 PF00285 Citrate synthase, C-terminal domain GRF56_RS13895 PF13673 Acetyltransferase (GNAT) domain GRF56_RS13905 PF01928 CYTH domain GRF56_RS13915 PF13673 Acetyltransferase (GNAT) domain GRF56_RS13920 PF00465 Iron-containing alcohol dehydrogenase GRF56_RS13925 PF08543 Phosphomethylpyrimidine kinase GRF56_RS13950 PF00664 ABC transporter transmembrane region GRF56_RS13950 PF00005 ABC transporter GRF56_RS13955 PF00664 ABC transporter transmembrane region GRF56_RS13955 PF00005 ABC transporter GRF56_RS13960 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS13960 PF00672 HAMP domain GRF56_RS13960 PF00072 Response regulator receiver domain GRF56_RS13960 PF01627 Hpt domain GRF56_RS13960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS13960 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GRF56_RS13965 PF00085 Thioredoxin GRF56_RS13970 PF00939 Sodium:sulfate symporter transmembrane region GRF56_RS13975 PF00343 Carbohydrate phosphorylase GRF56_RS13990 PF00892 EamA-like transporter family GRF56_RS14000 PF00300 Histidine phosphatase superfamily (branch 1) GRF56_RS14005 PF05193 Peptidase M16 inactive domain GRF56_RS14005 PF00675 Insulinase (Peptidase family M16) GRF56_RS14005 PF16187 Middle or third domain of peptidase_M16 GRF56_RS14010 PF05724 Thiopurine S-methyltransferase (TPMT) GRF56_RS14025 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GRF56_RS14025 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GRF56_RS14025 PF12833 Helix-turn-helix domain GRF56_RS14025 PF02805 Metal binding domain of Ada GRF56_RS14050 PF01925 Sulfite exporter TauE/SafE GRF56_RS14055 PF13520 Amino acid permease GRF56_RS14065 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GRF56_RS14065 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GRF56_RS14070 PF00378 Enoyl-CoA hydratase/isomerase GRF56_RS14075 PF00378 Enoyl-CoA hydratase/isomerase GRF56_RS14080 PF02770 Acyl-CoA dehydrogenase, middle domain GRF56_RS14080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GRF56_RS14080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GRF56_RS14085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GRF56_RS14085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GRF56_RS14085 PF02770 Acyl-CoA dehydrogenase, middle domain GRF56_RS14090 PF01039 Carboxyl transferase domain GRF56_RS14095 PF00378 Enoyl-CoA hydratase/isomerase GRF56_RS14100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GRF56_RS14100 PF00364 Biotin-requiring enzyme GRF56_RS14100 PF02785 Biotin carboxylase C-terminal domain GRF56_RS14100 PF00289 Biotin carboxylase, N-terminal domain GRF56_RS14105 PF00682 HMGL-like GRF56_RS14110 PF00376 MerR family regulatory protein GRF56_RS14110 PF09278 MerR, DNA binding GRF56_RS14125 PF01184 GPR1/FUN34/yaaH family GRF56_RS14130 PF06167 Glucose-regulated metallo-peptidase M90 GRF56_RS14140 PF01235 Sodium:alanine symporter family GRF56_RS14145 PF00378 Enoyl-CoA hydratase/isomerase GRF56_RS14160 PF04341 Protein of unknown function, DUF485 GRF56_RS14165 PF00474 Sodium:solute symporter family GRF56_RS14170 PF12848 ABC transporter GRF56_RS14170 PF00005 ABC transporter GRF56_RS14175 PF13145 PPIC-type PPIASE domain GRF56_RS14180 PF00216 Bacterial DNA-binding protein GRF56_RS14185 PF02190 ATP-dependent protease La (LON) substrate-binding domain GRF56_RS14185 PF05362 Lon protease (S16) C-terminal proteolytic domain GRF56_RS14185 PF00004 ATPase family associated with various cellular activities (AAA) GRF56_RS14190 PF10431 C-terminal, D2-small domain, of ClpB protein GRF56_RS14190 PF07724 AAA domain (Cdc48 subfamily) GRF56_RS14190 PF06689 ClpX C4-type zinc finger GRF56_RS14195 PF00574 Clp protease GRF56_RS14200 PF05697 Bacterial trigger factor protein (TF) GRF56_RS14200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GRF56_RS14200 PF05698 Bacterial trigger factor protein (TF) C-terminus GRF56_RS14215 PF12704 MacB-like periplasmic core domain GRF56_RS14215 PF02687 FtsX-like permease family GRF56_RS14220 PF00005 ABC transporter GRF56_RS14225 PF12704 MacB-like periplasmic core domain GRF56_RS14225 PF02687 FtsX-like permease family GRF56_RS14240 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GRF56_RS14245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GRF56_RS14250 PF03692 Putative zinc- or iron-chelating domain GRF56_RS14255 PF02901 Pyruvate formate lyase-like GRF56_RS14255 PF01228 Glycine radical GRF56_RS14260 PF01226 Formate/nitrite transporter GRF56_RS14265 PF18381 YcaO cyclodehydratase C-terminal domain GRF56_RS14265 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding GRF56_RS14270 PF00232 Glycosyl hydrolase family 1 GRF56_RS14275 PF03466 LysR substrate binding domain GRF56_RS14275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS14285 PF01717 Cobalamin-independent synthase, Catalytic domain GRF56_RS14285 PF08267 Cobalamin-independent synthase, N-terminal domain GRF56_RS14290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS14290 PF03466 LysR substrate binding domain GRF56_RS14295 PF03466 LysR substrate binding domain GRF56_RS14295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS14300 PF00857 Isochorismatase family GRF56_RS14305 PF05726 Pirin C-terminal cupin domain GRF56_RS14305 PF02678 Pirin GRF56_RS14310 PF07690 Major Facilitator Superfamily GRF56_RS14315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS14315 PF03466 LysR substrate binding domain GRF56_RS14320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS14320 PF03466 LysR substrate binding domain GRF56_RS14325 PF13460 NAD(P)H-binding GRF56_RS14335 PF01053 Cys/Met metabolism PLP-dependent enzyme GRF56_RS14340 PF00501 AMP-binding enzyme GRF56_RS14345 PF08891 YfcL protein GRF56_RS14355 PF03741 Integral membrane protein TerC family GRF56_RS14360 PF00691 OmpA family GRF56_RS14365 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS14365 PF17152 Periplasmic sensor domain GRF56_RS14375 PF18024 Helix-turn-helix domain GRF56_RS14375 PF00158 Sigma-54 interaction domain GRF56_RS14385 PF01329 Pterin 4 alpha carbinolamine dehydratase GRF56_RS14390 PF00351 Biopterin-dependent aromatic amino acid hydroxylase GRF56_RS14395 PF05128 Domain of unknown function (DUF697) GRF56_RS14400 PF04317 YcjX-like family, DUF463 GRF56_RS14410 PF06667 Phage shock protein B GRF56_RS14415 PF04012 PspA/IM30 family GRF56_RS14420 PF02954 Bacterial regulatory protein, Fis family GRF56_RS14420 PF00158 Sigma-54 interaction domain GRF56_RS14425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GRF56_RS14430 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS14435 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS14435 PF12911 N-terminal TM domain of oligopeptide transport permease C GRF56_RS14440 PF00005 ABC transporter GRF56_RS14440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GRF56_RS14445 PF00005 ABC transporter GRF56_RS14450 PF00183 Hsp90 protein GRF56_RS14450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS14455 PF13662 Toprim domain GRF56_RS14455 PF02132 RecR protein GRF56_RS14465 PF10722 Putative bacterial sensory transduction regulator GRF56_RS14475 PF00265 Thymidine kinase GRF56_RS14480 PF03553 Na+/H+ antiporter family GRF56_RS14485 PF00816 H-NS histone family GRF56_RS14490 PF01923 Cobalamin adenosyltransferase GRF56_RS14495 PF12843 Putative quorum-sensing-regulated virulence factor GRF56_RS14500 PF04055 Radical SAM superfamily GRF56_RS14505 PF06508 Queuosine biosynthesis protein QueC GRF56_RS14520 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GRF56_RS14525 PF18073 Rubredoxin metal binding domain GRF56_RS14535 PF00216 Bacterial DNA-binding protein GRF56_RS14540 PF00575 S1 RNA binding domain GRF56_RS14545 PF02224 Cytidylate kinase GRF56_RS14550 PF00925 GTP cyclohydrolase II GRF56_RS14555 PF03466 LysR substrate binding domain GRF56_RS14555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS14560 PF03466 LysR substrate binding domain GRF56_RS14560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS14565 PF07690 Major Facilitator Superfamily GRF56_RS14580 PF00881 Nitroreductase family GRF56_RS14585 PF03806 AbgT putative transporter family GRF56_RS14590 PF13188 PAS domain GRF56_RS14590 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS14590 PF00563 EAL domain GRF56_RS14590 PF03707 Bacterial signalling protein N terminal repeat GRF56_RS14595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS14595 PF03466 LysR substrate binding domain GRF56_RS14600 PF00072 Response regulator receiver domain GRF56_RS14610 PF01212 Beta-eliminating lyase GRF56_RS14615 PF00106 short chain dehydrogenase GRF56_RS14625 PF00248 Aldo/keto reductase family GRF56_RS14630 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GRF56_RS14640 PF00005 ABC transporter GRF56_RS14645 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS14650 PF00497 Bacterial extracellular solute-binding proteins, family 3 GRF56_RS14655 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS14660 PF03411 Penicillin-insensitive murein endopeptidase GRF56_RS14670 PF04536 TPM domain GRF56_RS14685 PF01618 MotA/TolQ/ExbB proton channel family GRF56_RS14690 PF00691 OmpA family GRF56_RS14690 PF13677 Membrane MotB of proton-channel complex MotA/MotB GRF56_RS14695 PF00593 TonB dependent receptor GRF56_RS14695 PF07715 TonB-dependent Receptor Plug Domain GRF56_RS14700 PF00326 Prolyl oligopeptidase family GRF56_RS14700 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GRF56_RS14720 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GRF56_RS14725 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GRF56_RS14730 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GRF56_RS14730 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GRF56_RS14740 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GRF56_RS14740 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GRF56_RS14745 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GRF56_RS14745 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GRF56_RS14745 PF00384 Molybdopterin oxidoreductase GRF56_RS14750 PF00146 NADH dehydrogenase GRF56_RS14755 PF12838 4Fe-4S dicluster domain GRF56_RS14760 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GRF56_RS14765 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GRF56_RS14770 PF00361 Proton-conducting membrane transporter GRF56_RS14770 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GRF56_RS14775 PF00361 Proton-conducting membrane transporter GRF56_RS14780 PF00361 Proton-conducting membrane transporter GRF56_RS14790 PF00072 Response regulator receiver domain GRF56_RS14795 PF01966 HD domain GRF56_RS14800 PF02769 AIR synthase related protein, C-terminal domain GRF56_RS14800 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GRF56_RS14800 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GRF56_RS14805 PF01464 Transglycosylase SLT domain GRF56_RS14805 PF00497 Bacterial extracellular solute-binding proteins, family 3 GRF56_RS14810 PF07191 zinc-ribbons GRF56_RS14815 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GRF56_RS14815 PF01926 50S ribosome-binding GTPase GRF56_RS14820 PF13360 PQQ-like domain GRF56_RS14825 PF09976 Tetratricopeptide repeat-like domain GRF56_RS14830 PF03129 Anticodon binding domain GRF56_RS14830 PF13393 Histidyl-tRNA synthetase GRF56_RS14840 PF13464 Domain of unknown function (DUF4115) GRF56_RS14850 PF04055 Radical SAM superfamily GRF56_RS14855 PF00334 Nucleoside diphosphate kinase GRF56_RS14860 PF12404 Peptidase GRF56_RS14860 PF00883 Cytosol aminopeptidase family, catalytic domain GRF56_RS14865 PF12404 Peptidase GRF56_RS14865 PF00883 Cytosol aminopeptidase family, catalytic domain GRF56_RS14870 PF00111 2Fe-2S iron-sulfur cluster binding domain GRF56_RS14875 PF00012 Hsp70 protein GRF56_RS14880 PF07743 HSCB C-terminal oligomerisation domain GRF56_RS14885 PF01521 Iron-sulphur cluster biosynthesis GRF56_RS14890 PF01592 NifU-like N terminal domain GRF56_RS14895 PF00266 Aminotransferase class-V GRF56_RS14900 PF02082 Transcriptional regulator GRF56_RS14905 PF00588 SpoU rRNA Methylase family GRF56_RS14935 PF13181 Tetratricopeptide repeat GRF56_RS14935 PF07719 Tetratricopeptide repeat GRF56_RS14945 PF07549 SecD/SecF GG Motif GRF56_RS14945 PF02355 Protein export membrane protein GRF56_RS14950 PF07549 SecD/SecF GG Motif GRF56_RS14950 PF02355 Protein export membrane protein GRF56_RS14950 PF13721 SecD export protein N-terminal TM region GRF56_RS14955 PF02699 Preprotein translocase subunit GRF56_RS14960 PF01702 Queuine tRNA-ribosyltransferase GRF56_RS14965 PF02547 Queuosine biosynthesis protein GRF56_RS14970 PF00571 CBS domain GRF56_RS14975 PF10417 C-terminal domain of 1-Cys peroxiredoxin GRF56_RS14975 PF00578 AhpC/TSA family GRF56_RS14980 PF07992 Pyridine nucleotide-disulphide oxidoreductase GRF56_RS14980 PF13192 Thioredoxin domain GRF56_RS15020 PF00664 ABC transporter transmembrane region GRF56_RS15020 PF00005 ABC transporter GRF56_RS15020 PF03412 Peptidase C39 family GRF56_RS15025 PF16199 Radical_SAM C-terminal domain GRF56_RS15025 PF04055 Radical SAM superfamily GRF56_RS15030 PF01493 GXGXG motif GRF56_RS15030 PF01645 Conserved region in glutamate synthase GRF56_RS15030 PF04898 Glutamate synthase central domain GRF56_RS15030 PF00310 Glutamine amidotransferases class-II GRF56_RS15035 PF07992 Pyridine nucleotide-disulphide oxidoreductase GRF56_RS15035 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GRF56_RS15045 PF00271 Helicase conserved C-terminal domain GRF56_RS15045 PF00270 DEAD/DEAH box helicase GRF56_RS15060 PF07670 Nucleoside recognition GRF56_RS15060 PF07664 Ferrous iron transport protein B C terminus GRF56_RS15060 PF02421 Ferrous iron transport protein B GRF56_RS15070 PF01253 Translation initiation factor SUI1 GRF56_RS15075 PF01169 Uncharacterized protein family UPF0016 GRF56_RS15120 PF01406 tRNA synthetases class I (C) catalytic domain GRF56_RS15120 PF09190 DALR domain GRF56_RS15125 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GRF56_RS15135 PF00149 Calcineurin-like phosphoesterase GRF56_RS15145 PF04226 Transglycosylase associated protein GRF56_RS15150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS15150 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS15150 PF08521 Two-component sensor kinase N-terminal GRF56_RS15155 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS15155 PF00072 Response regulator receiver domain GRF56_RS15170 PF01970 Tripartite tricarboxylate transporter TctA family GRF56_RS15190 PF01066 CDP-alcohol phosphatidyltransferase GRF56_RS15195 PF01541 GIY-YIG catalytic domain GRF56_RS15195 PF08459 UvrC Helix-hairpin-helix N-terminal GRF56_RS15195 PF02151 UvrB/uvrC motif GRF56_RS15200 PF00196 Bacterial regulatory proteins, luxR family GRF56_RS15200 PF00072 Response regulator receiver domain GRF56_RS15205 PF02348 Cytidylyltransferase GRF56_RS15210 PF03966 Trm112p-like protein GRF56_RS15215 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GRF56_RS15220 PF00664 ABC transporter transmembrane region GRF56_RS15220 PF00005 ABC transporter GRF56_RS15225 PF00753 Metallo-beta-lactamase superfamily GRF56_RS15225 PF03772 Competence protein GRF56_RS15240 PF00155 Aminotransferase class I and II GRF56_RS15250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS15250 PF03466 LysR substrate binding domain GRF56_RS15255 PF04219 Protein of unknown function, DUF GRF56_RS15260 PF03974 Ecotin GRF56_RS15265 PF03009 Glycerophosphoryl diester phosphodiesterase family GRF56_RS15270 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GRF56_RS15270 PF01266 FAD dependent oxidoreductase GRF56_RS15275 PF00455 DeoR C terminal sensor domain GRF56_RS15275 PF08220 DeoR-like helix-turn-helix domain GRF56_RS15280 PF07690 Major Facilitator Superfamily GRF56_RS15285 PF00230 Major intrinsic protein GRF56_RS15290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GRF56_RS15290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GRF56_RS15295 PF00672 HAMP domain GRF56_RS15295 PF02743 Cache domain GRF56_RS15295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS15305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS15305 PF03466 LysR substrate binding domain GRF56_RS15320 PF00248 Aldo/keto reductase family GRF56_RS15330 PF07690 Major Facilitator Superfamily GRF56_RS15335 PF02525 Flavodoxin-like fold GRF56_RS15350 PF05114 Protein of unknown function (DUF692) GRF56_RS15370 PF02322 Cytochrome bd terminal oxidase subunit II GRF56_RS15375 PF01654 Cytochrome bd terminal oxidase subunit I GRF56_RS15380 PF00392 Bacterial regulatory proteins, gntR family GRF56_RS15380 PF00155 Aminotransferase class I and II GRF56_RS15390 PF04391 Protein of unknown function (DUF533) GRF56_RS15395 PF03061 Thioesterase superfamily GRF56_RS15400 PF10689 Protein of unknown function (DUF2496) GRF56_RS15405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS15405 PF03466 LysR substrate binding domain GRF56_RS15415 PF07690 Major Facilitator Superfamily GRF56_RS15420 PF00849 RNA pseudouridylate synthase GRF56_RS15420 PF01479 S4 domain GRF56_RS15430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GRF56_RS15440 PF01844 HNH endonuclease GRF56_RS15445 PF02508 Rnf-Nqr subunit, membrane protein GRF56_RS15450 PF04060 Putative Fe-S cluster GRF56_RS15455 PF13375 RnfC Barrel sandwich hybrid domain GRF56_RS15455 PF12838 4Fe-4S dicluster domain GRF56_RS15455 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GRF56_RS15455 PF10531 SLBB domain GRF56_RS15460 PF03116 NQR2, RnfD, RnfE family GRF56_RS15465 PF04205 FMN-binding domain GRF56_RS15470 PF02508 Rnf-Nqr subunit, membrane protein GRF56_RS15475 PF10576 Iron-sulfur binding domain of endonuclease III GRF56_RS15475 PF00633 Helix-hairpin-helix motif GRF56_RS15475 PF00730 HhH-GPD superfamily base excision DNA repair protein GRF56_RS15480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GRF56_RS15485 PF18393 MotY N-terminal domain GRF56_RS15485 PF00691 OmpA family GRF56_RS15510 PF08378 Nuclease-related domain GRF56_RS15515 PF07759 Protein of unknown function (DUF1615) GRF56_RS15520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GRF56_RS15520 PF02142 MGS-like domain GRF56_RS15520 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GRF56_RS15525 PF00117 Glutamine amidotransferase class-I GRF56_RS15525 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GRF56_RS15530 PF01113 Dihydrodipicolinate reductase, N-terminus GRF56_RS15530 PF05173 Dihydrodipicolinate reductase, C-terminus GRF56_RS15545 PF01812 5-formyltetrahydrofolate cyclo-ligase family GRF56_RS15550 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GRF56_RS15555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GRF56_RS15555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GRF56_RS15555 PF01842 ACT domain GRF56_RS15560 PF01219 Prokaryotic diacylglycerol kinase GRF56_RS15565 PF00793 DAHP synthetase I family GRF56_RS15570 PF00583 Acetyltransferase (GNAT) family GRF56_RS15575 PF00005 ABC transporter GRF56_RS15580 PF01032 FecCD transport family GRF56_RS15595 PF00437 Type II/IV secretion system protein GRF56_RS15605 PF00842 Alanine racemase, C-terminal domain GRF56_RS15605 PF01168 Alanine racemase, N-terminal domain GRF56_RS15610 PF03741 Integral membrane protein TerC family GRF56_RS15615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GRF56_RS15615 PF00005 ABC transporter GRF56_RS15620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GRF56_RS15620 PF00005 ABC transporter GRF56_RS15625 PF12911 N-terminal TM domain of oligopeptide transport permease C GRF56_RS15625 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS15630 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS15635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GRF56_RS15640 PF01914 MarC family integral membrane protein GRF56_RS15645 PF00465 Iron-containing alcohol dehydrogenase GRF56_RS15645 PF00171 Aldehyde dehydrogenase family GRF56_RS15660 PF01709 Transcriptional regulator GRF56_RS15665 PF00152 tRNA synthetases class II (D, K and N) GRF56_RS15665 PF01336 OB-fold nucleic acid binding domain GRF56_RS15665 PF02938 GAD domain GRF56_RS15675 PF01904 Protein of unknown function DUF72 GRF56_RS15680 PF13649 Methyltransferase domain GRF56_RS15685 PF08003 Protein of unknown function (DUF1698) GRF56_RS15705 PF00578 AhpC/TSA family GRF56_RS15705 PF10417 C-terminal domain of 1-Cys peroxiredoxin GRF56_RS15710 PF03466 LysR substrate binding domain GRF56_RS15710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS15715 PF00877 NlpC/P60 family GRF56_RS15725 PF03466 LysR substrate binding domain GRF56_RS15725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS15730 PF02447 GntP family permease GRF56_RS15735 PF00291 Pyridoxal-phosphate dependent enzyme GRF56_RS15745 PF00180 Isocitrate/isopropylmalate dehydrogenase GRF56_RS15750 PF12833 Helix-turn-helix domain GRF56_RS15755 PF01238 Phosphomannose isomerase type I GRF56_RS15760 PF17678 Glycosyl hydrolase family 92 N-terminal domain GRF56_RS15760 PF07971 Glycosyl hydrolase family 92 GRF56_RS15775 PF17678 Glycosyl hydrolase family 92 N-terminal domain GRF56_RS15775 PF07971 Glycosyl hydrolase family 92 GRF56_RS15795 PF05656 Protein of unknown function (DUF805) GRF56_RS15805 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GRF56_RS15805 PF00034 Cytochrome c GRF56_RS15815 PF01156 Inosine-uridine preferring nucleoside hydrolase GRF56_RS15825 PF00171 Aldehyde dehydrogenase family GRF56_RS15830 PF00440 Bacterial regulatory proteins, tetR family GRF56_RS15830 PF08359 YsiA-like protein, C-terminal region GRF56_RS15840 PF00465 Iron-containing alcohol dehydrogenase GRF56_RS15855 PF00916 Sulfate permease family GRF56_RS15855 PF01740 STAS domain GRF56_RS15860 PF01554 MatE GRF56_RS15870 PF04325 Protein of unknown function (DUF465) GRF56_RS15880 PF13188 PAS domain GRF56_RS15880 PF00563 EAL domain GRF56_RS15880 PF03707 Bacterial signalling protein N terminal repeat GRF56_RS15880 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS15885 PF04337 Protein of unknown function, DUF480 GRF56_RS15895 PF00127 Copper binding proteins, plastocyanin/azurin family GRF56_RS15900 PF02424 ApbE family GRF56_RS15915 PF03372 Endonuclease/Exonuclease/phosphatase family GRF56_RS15920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GRF56_RS15925 PF00873 AcrB/AcrD/AcrF family GRF56_RS15940 PF00529 HlyD membrane-fusion protein of T1SS GRF56_RS15940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GRF56_RS15945 PF00873 AcrB/AcrD/AcrF family GRF56_RS15960 PF00005 ABC transporter GRF56_RS15965 PF01032 FecCD transport family GRF56_RS15970 PF01032 FecCD transport family GRF56_RS15975 PF07715 TonB-dependent Receptor Plug Domain GRF56_RS15975 PF00593 TonB dependent receptor GRF56_RS15980 PF08021 Siderophore-interacting FAD-binding domain GRF56_RS15980 PF04954 Siderophore-interacting protein GRF56_RS15985 PF11849 Domain of unknown function (DUF3369) GRF56_RS15995 PF00929 Exonuclease GRF56_RS16000 PF00075 RNase H GRF56_RS16005 PF08241 Methyltransferase domain GRF56_RS16010 PF16123 Hydroxyacylglutathione hydrolase C-terminus GRF56_RS16010 PF00753 Metallo-beta-lactamase superfamily GRF56_RS16015 PF01464 Transglycosylase SLT domain GRF56_RS16015 PF01476 LysM domain GRF56_RS16020 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family GRF56_RS16030 PF05472 DNA replication terminus site-binding protein (Ter protein) GRF56_RS16035 PF00176 SNF2 family N-terminal domain GRF56_RS16035 PF04434 SWIM zinc finger GRF56_RS16035 PF00271 Helicase conserved C-terminal domain GRF56_RS16040 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS16040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS16040 PF00672 HAMP domain GRF56_RS16045 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS16045 PF00072 Response regulator receiver domain GRF56_RS16050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GRF56_RS16050 PF00529 HlyD membrane-fusion protein of T1SS GRF56_RS16055 PF00873 AcrB/AcrD/AcrF family GRF56_RS16065 PF03734 L,D-transpeptidase catalytic domain GRF56_RS16065 PF17969 L,D-transpeptidase C-terminal domain GRF56_RS16065 PF01476 LysM domain GRF56_RS16075 PF00939 Sodium:sulfate symporter transmembrane region GRF56_RS16085 PF05971 RNA methyltransferase GRF56_RS16090 PF00877 NlpC/P60 family GRF56_RS16095 PF01648 4'-phosphopantetheinyl transferase superfamily GRF56_RS16100 PF00085 Thioredoxin GRF56_RS16110 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GRF56_RS16115 PF00551 Formyl transferase GRF56_RS16115 PF01842 ACT domain GRF56_RS16125 PF13091 PLD-like domain GRF56_RS16125 PF13396 Phospholipase_D-nuclease N-terminal GRF56_RS16140 PF10145 Phage-related minor tail protein GRF56_RS16140 PF01551 Peptidase family M23 GRF56_RS16140 PF01464 Transglycosylase SLT domain GRF56_RS16145 PF00230 Major intrinsic protein GRF56_RS16155 PF00155 Aminotransferase class I and II GRF56_RS16160 PF03606 C4-dicarboxylate anaerobic carrier GRF56_RS16165 PF12241 Trans-2-enoyl-CoA reductase catalytic region GRF56_RS16165 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GRF56_RS16165 PF07055 Enoyl reductase FAD binding domain GRF56_RS16170 PF00672 HAMP domain GRF56_RS16170 PF12729 Four helix bundle sensory module for signal transduction GRF56_RS16170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS16175 PF00300 Histidine phosphatase superfamily (branch 1) GRF56_RS16180 PF13309 HTH domain GRF56_RS16180 PF08348 YheO-like PAS domain GRF56_RS16185 PF03313 Serine dehydratase alpha chain GRF56_RS16190 PF01042 Endoribonuclease L-PSP GRF56_RS16200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS16200 PF00672 HAMP domain GRF56_RS16200 PF12729 Four helix bundle sensory module for signal transduction GRF56_RS16215 PF17810 Arginine decarboxylase helical bundle domain GRF56_RS16215 PF17944 Arginine decarboxylase C-terminal helical extension GRF56_RS16215 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GRF56_RS16220 PF07687 Peptidase dimerisation domain GRF56_RS16220 PF01546 Peptidase family M20/M25/M40 GRF56_RS16235 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain GRF56_RS16235 PF05221 S-adenosyl-L-homocysteine hydrolase GRF56_RS16245 PF04264 YceI-like domain GRF56_RS16250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS16250 PF03466 LysR substrate binding domain GRF56_RS16260 PF01268 Formate--tetrahydrofolate ligase GRF56_RS16265 PF00672 HAMP domain GRF56_RS16265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS16265 PF17200 Single Cache domain 2 GRF56_RS16270 PF00672 HAMP domain GRF56_RS16270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS16275 PF01227 GTP cyclohydrolase I GRF56_RS16280 PF00994 Probable molybdopterin binding domain GRF56_RS16280 PF03454 MoeA C-terminal region (domain IV) GRF56_RS16280 PF03453 MoeA N-terminal region (domain I and II) GRF56_RS16285 PF00899 ThiF family GRF56_RS16300 PF06406 StbA protein GRF56_RS16305 PF00561 alpha/beta hydrolase fold GRF56_RS16310 PF00005 ABC transporter GRF56_RS16310 PF03459 TOBE domain GRF56_RS16315 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS16325 PF02391 MoaE protein GRF56_RS16330 PF02597 ThiS family GRF56_RS16335 PF01967 MoaC family GRF56_RS16340 PF00994 Probable molybdopterin binding domain GRF56_RS16345 PF03264 NapC/NirT cytochrome c family, N-terminal region GRF56_RS16350 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) GRF56_RS16355 PF12837 4Fe-4S binding domain GRF56_RS16355 PF12801 4Fe-4S binding domain GRF56_RS16360 PF12838 4Fe-4S dicluster domain GRF56_RS16360 PF12800 4Fe-4S binding domain GRF56_RS16365 PF10518 TAT (twin-arginine translocation) pathway signal sequence GRF56_RS16365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GRF56_RS16365 PF00384 Molybdopterin oxidoreductase GRF56_RS16365 PF01568 Molydopterin dinucleotide binding domain GRF56_RS16375 PF12838 4Fe-4S dicluster domain GRF56_RS16375 PF13187 4Fe-4S dicluster domain GRF56_RS16380 PF06463 Molybdenum Cofactor Synthesis C GRF56_RS16380 PF04055 Radical SAM superfamily GRF56_RS16385 PF00672 HAMP domain GRF56_RS16385 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GRF56_RS16385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS16385 PF07730 Histidine kinase GRF56_RS16390 PF00072 Response regulator receiver domain GRF56_RS16390 PF00196 Bacterial regulatory proteins, luxR family GRF56_RS16405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS16405 PF00072 Response regulator receiver domain GRF56_RS16405 PF09456 RcsC Alpha-Beta-Loop (ABL) GRF56_RS16405 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS16415 PF01933 Uncharacterised protein family UPF0052 GRF56_RS16425 PF13230 Glutamine amidotransferases class-II GRF56_RS16430 PF13580 SIS domain GRF56_RS16435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GRF56_RS16435 PF09317 Domain of unknown function (DUF1974) GRF56_RS16435 PF02770 Acyl-CoA dehydrogenase, middle domain GRF56_RS16435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GRF56_RS16440 PF07687 Peptidase dimerisation domain GRF56_RS16440 PF01546 Peptidase family M20/M25/M40 GRF56_RS16450 PF03364 Polyketide cyclase / dehydrase and lipid transport GRF56_RS16455 PF01668 SmpB protein GRF56_RS16510 PF10548 P22AR C-terminal domain GRF56_RS16510 PF08346 AntA/AntB antirepressor GRF56_RS16675 PF05772 NinB protein GRF56_RS16750 PF12684 PDDEXK-like domain of unknown function (DUF3799) GRF56_RS16750 PF06630 Enterobacterial exodeoxyribonuclease VIII GRF56_RS16780 PF04381 Putative exonuclease, RdgC GRF56_RS16840 PF02899 Phage integrase, N-terminal SAM-like domain GRF56_RS16840 PF00589 Phage integrase family GRF56_RS16845 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS16845 PF09456 RcsC Alpha-Beta-Loop (ABL) GRF56_RS16845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS16845 PF00072 Response regulator receiver domain GRF56_RS16850 PF03707 Bacterial signalling protein N terminal repeat GRF56_RS16850 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS16850 PF00563 EAL domain GRF56_RS16855 PF01568 Molydopterin dinucleotide binding domain GRF56_RS16855 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GRF56_RS16855 PF12838 4Fe-4S dicluster domain GRF56_RS16855 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GRF56_RS16855 PF00384 Molybdopterin oxidoreductase GRF56_RS16870 PF00440 Bacterial regulatory proteins, tetR family GRF56_RS16875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GRF56_RS16875 PF09317 Domain of unknown function (DUF1974) GRF56_RS16875 PF02770 Acyl-CoA dehydrogenase, middle domain GRF56_RS16875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GRF56_RS16880 PF00873 AcrB/AcrD/AcrF family GRF56_RS16890 PF02075 Crossover junction endodeoxyribonuclease RuvC GRF56_RS16895 PF02108 Flagellar assembly protein FliH GRF56_RS16900 PF06578 YOP proteins translocation protein K (YscK) GRF56_RS16905 PF01514 Secretory protein of YscJ/FliF family GRF56_RS16910 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI GRF56_RS16915 PF09025 YopR, type III needle-polymerisation regulator GRF56_RS16920 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) GRF56_RS16925 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF GRF56_RS16935 PF16697 Inner membrane component of T3SS, cytoplasmic domain GRF56_RS16935 PF16693 Inner membrane component of T3SS, periplasmic domain GRF56_RS16945 PF05932 Tir chaperone protein (CesT) family GRF56_RS16955 PF12833 Helix-turn-helix domain GRF56_RS16970 PF05932 Tir chaperone protein (CesT) family GRF56_RS16975 PF05844 YopD protein GRF56_RS16980 PF04888 Secretion system effector C (SseC) like family GRF56_RS16985 PF07720 Tetratricopeptide repeat GRF56_RS16990 PF04792 V antigen (LcrV) protein GRF56_RS16995 PF07216 LcrG protein GRF56_RS17000 PF09621 Type III secretion system regulator (LcrR) GRF56_RS17005 PF00771 FHIPEP family GRF56_RS17015 PF09474 Type III secretion system YscX (type_III_YscX) GRF56_RS17025 PF09059 TyeA GRF56_RS17030 PF07201 HrpJ-like domain GRF56_RS17035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GRF56_RS17035 PF02874 ATP synthase alpha/beta family, beta-barrel domain GRF56_RS17035 PF18269 T3SS EscN ATPase C-terminal domain GRF56_RS17055 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GRF56_RS17060 PF00813 FliP family GRF56_RS17065 PF01313 Bacterial export proteins, family 3 GRF56_RS17070 PF01311 Bacterial export proteins, family 1 GRF56_RS17075 PF01312 FlhB HrpN YscU SpaS Family GRF56_RS17080 PF03496 ADP-ribosyltransferase exoenzyme GRF56_RS17090 PF00155 Aminotransferase class I and II GRF56_RS17095 PF00367 phosphotransferase system, EIIB GRF56_RS17095 PF02378 Phosphotransferase system, EIIC GRF56_RS17100 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GRF56_RS17100 PF00356 Bacterial regulatory proteins, lacI family GRF56_RS17130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GRF56_RS17130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GRF56_RS17130 PF02378 Phosphotransferase system, EIIC GRF56_RS17135 PF07690 Major Facilitator Superfamily GRF56_RS17140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GRF56_RS17150 PF00849 RNA pseudouridylate synthase GRF56_RS17155 PF00293 NUDIX domain GRF56_RS17165 PF04356 Protein of unknown function (DUF489) GRF56_RS17170 PF08328 Adenylosuccinate lyase C-terminal GRF56_RS17170 PF00206 Lyase GRF56_RS17175 PF08007 Cupin superfamily protein GRF56_RS17195 PF13417 Glutathione S-transferase, N-terminal domain GRF56_RS17200 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GRF56_RS17200 PF01243 Pyridoxamine 5'-phosphate oxidase GRF56_RS17230 PF01189 16S rRNA methyltransferase RsmB/F GRF56_RS17230 PF01029 NusB family GRF56_RS17240 PF00462 Glutaredoxin GRF56_RS17245 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GRF56_RS17245 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GRF56_RS17255 PF04333 MlaA lipoprotein GRF56_RS17265 PF03918 Cytochrome C biogenesis protein GRF56_RS17270 PF08534 Redoxin GRF56_RS17275 PF01578 Cytochrome C assembly protein GRF56_RS17275 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GRF56_RS17280 PF03100 CcmE GRF56_RS17285 PF04995 Heme exporter protein D (CcmD) GRF56_RS17290 PF01578 Cytochrome C assembly protein GRF56_RS17295 PF03379 CcmB protein GRF56_RS17300 PF00005 ABC transporter GRF56_RS17310 PF01584 CheW-like domain GRF56_RS17320 PF13614 AAA domain GRF56_RS17325 PF00691 OmpA family GRF56_RS17325 PF13677 Membrane MotB of proton-channel complex MotA/MotB GRF56_RS17330 PF01618 MotA/TolQ/ExbB proton channel family GRF56_RS17335 PF00072 Response regulator receiver domain GRF56_RS17335 PF01339 CheB methylesterase GRF56_RS17340 PF01584 CheW-like domain GRF56_RS17340 PF07194 P2 response regulator binding domain GRF56_RS17340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS17340 PF02895 Signal transducing histidine kinase, homodimeric domain GRF56_RS17340 PF01627 Hpt domain GRF56_RS17345 PF04344 Chemotaxis phosphatase, CheZ GRF56_RS17350 PF00072 Response regulator receiver domain GRF56_RS17355 PF04542 Sigma-70 region 2 GRF56_RS17355 PF04539 Sigma-70 region 3 GRF56_RS17355 PF04545 Sigma-70, region 4 GRF56_RS17360 PF10609 NUBPL iron-transfer P-loop NTPase GRF56_RS17365 PF00448 SRP54-type protein, GTPase domain GRF56_RS17370 PF00771 FHIPEP family GRF56_RS17375 PF01312 FlhB HrpN YscU SpaS Family GRF56_RS17380 PF01311 Bacterial export proteins, family 1 GRF56_RS17385 PF01313 Bacterial export proteins, family 3 GRF56_RS17390 PF00813 FliP family GRF56_RS17395 PF04347 Flagellar biosynthesis protein, FliO GRF56_RS17400 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GRF56_RS17405 PF02154 Flagellar motor switch protein FliM GRF56_RS17405 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GRF56_RS17425 PF18269 T3SS EscN ATPase C-terminal domain GRF56_RS17425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GRF56_RS17435 PF14841 FliG middle domain GRF56_RS17435 PF14842 FliG N-terminal domain GRF56_RS17435 PF01706 FliG C-terminal domain GRF56_RS17440 PF01514 Secretory protein of YscJ/FliF family GRF56_RS17440 PF08345 Flagellar M-ring protein C-terminal GRF56_RS17445 PF02049 Flagellar hook-basal body complex protein FliE GRF56_RS17455 PF07969 Amidohydrolase family GRF56_RS17465 PF02887 Pyruvate kinase, alpha/beta domain GRF56_RS17465 PF00224 Pyruvate kinase, barrel domain GRF56_RS17470 PF01380 SIS domain GRF56_RS17470 PF01418 Helix-turn-helix domain, rpiR family GRF56_RS17475 PF02685 Glucokinase GRF56_RS17500 PF00672 HAMP domain GRF56_RS17500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS17505 PF00497 Bacterial extracellular solute-binding proteins, family 3 GRF56_RS17510 PF00860 Permease family GRF56_RS17520 PF05433 Glycine zipper 2TM domain GRF56_RS17520 PF16998 17 kDa outer membrane surface antigen GRF56_RS17525 PF00390 Malic enzyme, N-terminal domain GRF56_RS17525 PF03949 Malic enzyme, NAD binding domain GRF56_RS17545 PF13247 4Fe-4S dicluster domain GRF56_RS17550 PF12838 4Fe-4S dicluster domain GRF56_RS17550 PF12838 4Fe-4S dicluster domain GRF56_RS17550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GRF56_RS17550 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GRF56_RS17550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GRF56_RS17550 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GRF56_RS17550 PF01568 Molydopterin dinucleotide binding domain GRF56_RS17550 PF00384 Molybdopterin oxidoreductase GRF56_RS17550 PF01568 Molydopterin dinucleotide binding domain GRF56_RS17550 PF00384 Molybdopterin oxidoreductase GRF56_RS17590 PF02634 FdhD/NarQ family GRF56_RS17600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS17600 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS17600 PF00989 PAS fold GRF56_RS17605 PF00072 Response regulator receiver domain GRF56_RS17605 PF02954 Bacterial regulatory protein, Fis family GRF56_RS17605 PF00158 Sigma-54 interaction domain GRF56_RS17610 PF12849 PBP superfamily domain GRF56_RS17615 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS17620 PF00005 ABC transporter GRF56_RS17625 PF12804 MobA-like NTP transferase domain GRF56_RS17630 PF00994 Probable molybdopterin binding domain GRF56_RS17630 PF03453 MoeA N-terminal region (domain I and II) GRF56_RS17630 PF03454 MoeA C-terminal region (domain IV) GRF56_RS17635 PF04632 Fusaric acid resistance protein family GRF56_RS17650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS17650 PF13426 PAS domain GRF56_RS17650 PF08447 PAS fold GRF56_RS17670 PF05114 Protein of unknown function (DUF692) GRF56_RS17680 PF10725 Protein of unknown function (DUF2517) GRF56_RS17700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS17700 PF00072 Response regulator receiver domain GRF56_RS17700 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS17700 PF09308 LuxQ, periplasmic GRF56_RS17705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GRF56_RS17710 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS17715 PF00528 Binding-protein-dependent transport system inner membrane component GRF56_RS17715 PF12911 N-terminal TM domain of oligopeptide transport permease C GRF56_RS17720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GRF56_RS17720 PF00005 ABC transporter GRF56_RS17725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GRF56_RS17725 PF00005 ABC transporter GRF56_RS17735 PF01869 BadF/BadG/BcrA/BcrD ATPase family GRF56_RS17740 PF00728 Glycosyl hydrolase family 20, catalytic domain GRF56_RS17740 PF02838 Glycosyl hydrolase family 20, domain 2 GRF56_RS17745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS17745 PF08447 PAS fold GRF56_RS17755 PF08272 Topoisomerase I zinc-ribbon-like GRF56_RS17755 PF01396 Topoisomerase DNA binding C4 zinc finger GRF56_RS17755 PF01751 Toprim domain GRF56_RS17755 PF01131 DNA topoisomerase GRF56_RS17760 PF04996 Succinylarginine dihydrolase GRF56_RS17785 PF01627 Hpt domain GRF56_RS17785 PF00672 HAMP domain GRF56_RS17785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS17785 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GRF56_RS17785 PF00072 Response regulator receiver domain GRF56_RS17785 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS17790 PF00072 Response regulator receiver domain GRF56_RS17790 PF00196 Bacterial regulatory proteins, luxR family GRF56_RS17815 PF01590 GAF domain GRF56_RS17815 PF00989 PAS fold GRF56_RS17815 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS17815 PF00563 EAL domain GRF56_RS17825 PF12838 4Fe-4S dicluster domain GRF56_RS17835 PF02635 DsrE/DsrF-like family GRF56_RS17840 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS17845 PF07690 Major Facilitator Superfamily GRF56_RS17850 PF08496 Peptidase family S49 N-terminal GRF56_RS17850 PF01343 Peptidase family S49 GRF56_RS17855 PF00106 short chain dehydrogenase GRF56_RS17860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS17860 PF03466 LysR substrate binding domain GRF56_RS17865 PF07690 Major Facilitator Superfamily GRF56_RS17870 PF00155 Aminotransferase class I and II GRF56_RS17890 PF01161 Phosphatidylethanolamine-binding protein GRF56_RS17905 PF03167 Uracil DNA glycosylase superfamily GRF56_RS17915 PF01228 Glycine radical GRF56_RS17920 PF00375 Sodium:dicarboxylate symporter family GRF56_RS17925 PF00793 DAHP synthetase I family GRF56_RS17930 PF13369 Transglutaminase-like superfamily GRF56_RS17940 PF17827 PrmC N-terminal domain GRF56_RS17940 PF13847 Methyltransferase domain GRF56_RS17945 PF00472 RF-1 domain GRF56_RS17945 PF03462 PCRF domain GRF56_RS17950 PF01488 Shikimate / quinate 5-dehydrogenase GRF56_RS17950 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GRF56_RS17950 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GRF56_RS17955 PF03550 Outer membrane lipoprotein LolB GRF56_RS17960 PF00288 GHMP kinases N terminal domain GRF56_RS17960 PF08544 GHMP kinases C terminal GRF56_RS17970 PF14572 Phosphoribosyl synthetase-associated domain GRF56_RS17970 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GRF56_RS17975 PF02872 5'-nucleotidase, C-terminal domain GRF56_RS17975 PF00149 Calcineurin-like phosphoesterase GRF56_RS17980 PF01195 Peptidyl-tRNA hydrolase GRF56_RS17985 PF01926 50S ribosome-binding GTPase GRF56_RS17985 PF06071 Protein of unknown function (DUF933) GRF56_RS17995 PF09588 YqaJ-like viral recombinase domain GRF56_RS18025 PF01695 IstB-like ATP binding protein GRF56_RS18030 PF00665 Integrase core domain GRF56_RS18050 PF04002 RadC-like JAB domain GRF56_RS18075 PF00005 ABC transporter GRF56_RS18130 PF00717 Peptidase S24-like GRF56_RS18135 PF11799 impB/mucB/samB family C-terminal domain GRF56_RS18135 PF13438 Domain of unknown function (DUF4113) GRF56_RS18135 PF00817 impB/mucB/samB family GRF56_RS18135 PF11798 IMS family HHH motif GRF56_RS18225 PF03600 Citrate transporter GRF56_RS18225 PF02080 TrkA-C domain GRF56_RS18230 PF04973 Nicotinamide mononucleotide transporter GRF56_RS18235 PF01048 Phosphorylase superfamily GRF56_RS18255 PF00128 Alpha amylase, catalytic domain GRF56_RS18255 PF16657 Maltogenic Amylase, C-terminal domain GRF56_RS18260 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase GRF56_RS18260 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg GRF56_RS18260 PF10371 Domain of unknown function GRF56_RS18260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GRF56_RS18260 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II GRF56_RS18265 PF07690 Major Facilitator Superfamily GRF56_RS18270 PF13419 Haloacid dehalogenase-like hydrolase GRF56_RS18285 PF00171 Aldehyde dehydrogenase family GRF56_RS18290 PF04958 Arginine N-succinyltransferase beta subunit GRF56_RS18295 PF00202 Aminotransferase class-III GRF56_RS18300 PF00117 Glutamine amidotransferase class-I GRF56_RS18310 PF00579 tRNA synthetases class I (W and Y) GRF56_RS18315 PF13419 Haloacid dehalogenase-like hydrolase GRF56_RS18320 PF00834 Ribulose-phosphate 3 epimerase family GRF56_RS18325 PF02086 D12 class N6 adenine-specific DNA methyltransferase GRF56_RS18335 PF01761 3-dehydroquinate synthase GRF56_RS18340 PF01202 Shikimate kinase GRF56_RS18345 PF07660 Secretin and TonB N terminus short domain GRF56_RS18345 PF03958 Bacterial type II/III secretion system short domain GRF56_RS18345 PF00263 Bacterial type II and III secretion system protein GRF56_RS18345 PF11741 AMIN domain GRF56_RS18370 PF17092 Penicillin-binding protein OB-like domain GRF56_RS18370 PF00905 Penicillin binding protein transpeptidase domain GRF56_RS18370 PF00912 Transglycosylase GRF56_RS18375 PF03466 LysR substrate binding domain GRF56_RS18375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS18380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS18380 PF00672 HAMP domain GRF56_RS18380 PF02743 Cache domain GRF56_RS18395 PF03466 LysR substrate binding domain GRF56_RS18395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS18405 PF01476 LysM domain GRF56_RS18405 PF08525 Opacity-associated protein A N-terminal motif GRF56_RS18405 PF01551 Peptidase family M23 GRF56_RS18415 PF00924 Mechanosensitive ion channel GRF56_RS18415 PF12795 Mechanosensitive ion channel porin domain GRF56_RS18415 PF12794 Mechanosensitive ion channel inner membrane domain 1 GRF56_RS18420 PF03009 Glycerophosphoryl diester phosphodiesterase family GRF56_RS18425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS18425 PF02743 Cache domain GRF56_RS18425 PF00672 HAMP domain GRF56_RS18430 PF02910 Fumarate reductase flavoprotein C-term GRF56_RS18430 PF00890 FAD binding domain GRF56_RS18435 PF13183 4Fe-4S dicluster domain GRF56_RS18435 PF13085 2Fe-2S iron-sulfur cluster binding domain GRF56_RS18440 PF02300 Fumarate reductase subunit C GRF56_RS18445 PF02313 Fumarate reductase subunit D GRF56_RS18450 PF07670 Nucleoside recognition GRF56_RS18455 PF07670 Nucleoside recognition GRF56_RS18460 PF01546 Peptidase family M20/M25/M40 GRF56_RS18460 PF07687 Peptidase dimerisation domain GRF56_RS18485 PF00501 AMP-binding enzyme GRF56_RS18495 PF00106 short chain dehydrogenase GRF56_RS18505 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS18505 PF00072 Response regulator receiver domain GRF56_RS18510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS18510 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS18510 PF08521 Two-component sensor kinase N-terminal GRF56_RS18530 PF00478 IMP dehydrogenase / GMP reductase domain GRF56_RS18540 PF01132 Elongation factor P (EF-P) OB domain GRF56_RS18540 PF08207 Elongation factor P (EF-P) KOW-like domain GRF56_RS18540 PF09285 Elongation factor P, C-terminal GRF56_RS18555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GRF56_RS18555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GRF56_RS18575 PF13419 Haloacid dehalogenase-like hydrolase GRF56_RS18590 PF05230 MASE2 domain GRF56_RS18590 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS18595 PF00313 'Cold-shock' DNA-binding domain GRF56_RS18600 PF00857 Isochorismatase family GRF56_RS18605 PF01494 FAD binding domain GRF56_RS18610 PF00919 Uncharacterized protein family UPF0004 GRF56_RS18610 PF01938 TRAM domain GRF56_RS18610 PF04055 Radical SAM superfamily GRF56_RS18615 PF02562 PhoH-like protein GRF56_RS18620 PF02130 Uncharacterized protein family UPF0054 GRF56_RS18625 PF03471 Transporter associated domain GRF56_RS18625 PF00571 CBS domain GRF56_RS18630 PF00795 Carbon-nitrogen hydrolase GRF56_RS18635 PF13411 MerR HTH family regulatory protein GRF56_RS18640 PF01368 DHH family GRF56_RS18640 PF02272 DHHA1 domain GRF56_RS18640 PF17768 RecJ OB domain GRF56_RS18650 PF01741 Large-conductance mechanosensitive channel, MscL GRF56_RS18660 PF00589 Phage integrase family GRF56_RS18660 PF02899 Phage integrase, N-terminal SAM-like domain GRF56_RS18665 PF00258 Flavodoxin GRF56_RS18670 PF01523 Putative modulator of DNA gyrase GRF56_RS18675 PF01523 Putative modulator of DNA gyrase GRF56_RS18680 PF07295 Zinc-ribbon containing domain GRF56_RS18685 PF00133 tRNA synthetases class I (I, L, M and V) GRF56_RS18685 PF08264 Anticodon-binding domain of tRNA GRF56_RS18685 PF13603 Leucyl-tRNA synthetase, Domain 2 GRF56_RS18700 PF01467 Cytidylyltransferase-like GRF56_RS18710 PF02590 Predicted SPOUT methyltransferase GRF56_RS18715 PF00905 Penicillin binding protein transpeptidase domain GRF56_RS18715 PF03717 Penicillin-binding Protein dimerisation domain GRF56_RS18720 PF01098 Cell cycle protein GRF56_RS18725 PF13406 Transglycosylase SLT domain GRF56_RS18730 PF03330 Lytic transglycolase GRF56_RS18730 PF05036 Sporulation related domain GRF56_RS18735 PF07943 Penicillin-binding protein 5, C-terminal domain GRF56_RS18735 PF00768 D-alanyl-D-alanine carboxypeptidase GRF56_RS18740 PF04359 Protein of unknown function (DUF493) GRF56_RS18745 PF03099 Biotin/lipoate A/B protein ligase family GRF56_RS18750 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GRF56_RS18750 PF04055 Radical SAM superfamily GRF56_RS18765 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GRF56_RS18765 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GRF56_RS18770 PF07023 Protein of unknown function (DUF1315) GRF56_RS18775 PF17763 Glutaminase/Asparaginase C-terminal domain GRF56_RS18775 PF00710 Asparaginase, N-terminal GRF56_RS18780 PF03616 Sodium/glutamate symporter GRF56_RS18785 PF02743 Cache domain GRF56_RS18785 PF00672 HAMP domain GRF56_RS18785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS18795 PF00152 tRNA synthetases class II (D, K and N) GRF56_RS18795 PF01336 OB-fold nucleic acid binding domain GRF56_RS18800 PF02567 Phenazine biosynthesis-like protein GRF56_RS18805 PF00667 FAD binding domain GRF56_RS18805 PF00175 Oxidoreductase NAD-binding domain GRF56_RS18805 PF00258 Flavodoxin GRF56_RS18810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GRF56_RS18810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GRF56_RS18815 PF01507 Phosphoadenosine phosphosulfate reductase family GRF56_RS18820 PF00186 Dihydrofolate reductase GRF56_RS18825 PF12821 Threonine/Serine exporter, ThrE GRF56_RS18830 PF06738 Putative threonine/serine exporter GRF56_RS18840 PF00994 Probable molybdopterin binding domain GRF56_RS18850 PF06004 Bacterial protein of unknown function (DUF903) GRF56_RS18855 PF00581 Rhodanese-like domain GRF56_RS18860 PF04960 Glutaminase GRF56_RS18865 PF04320 Protein with unknown function (DUF469) GRF56_RS18870 PF02390 Putative methyltransferase GRF56_RS18875 PF00155 Aminotransferase class I and II GRF56_RS18880 PF00563 EAL domain GRF56_RS18880 PF12792 CSS motif domain associated with EAL GRF56_RS18885 PF01370 NAD dependent epimerase/dehydratase family GRF56_RS18885 PF08338 Domain of unknown function (DUF1731) GRF56_RS18895 PF00005 ABC transporter GRF56_RS18900 PF13472 GDSL-like Lipase/Acylhydrolase family GRF56_RS18905 PF00072 Response regulator receiver domain GRF56_RS18905 PF01584 CheW-like domain GRF56_RS18910 PF00704 Glycosyl hydrolases family 18 GRF56_RS18910 PF06483 Chitinase C GRF56_RS18950 PF18416 N-acetylglucosamine binding protein domain 2 GRF56_RS18950 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GRF56_RS18955 PF12561 ToxR activated gene A lipoprotein domain GRF56_RS18955 PF17945 Beta/Gamma crystallin GRF56_RS18960 PF08329 Chitinase A, N-terminal domain GRF56_RS18960 PF00704 Glycosyl hydrolases family 18 GRF56_RS18970 PF08329 Chitinase A, N-terminal domain GRF56_RS18970 PF00704 Glycosyl hydrolases family 18 GRF56_RS18975 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GRF56_RS18975 PF00072 Response regulator receiver domain GRF56_RS18975 PF00672 HAMP domain GRF56_RS18975 PF01627 Hpt domain GRF56_RS18975 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS18975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS18985 PF13443 Cro/C1-type HTH DNA-binding domain GRF56_RS18995 PF12832 MFS_1 like family GRF56_RS19000 PF00593 TonB dependent receptor GRF56_RS19000 PF07715 TonB-dependent Receptor Plug Domain GRF56_RS19020 PF01243 Pyridoxamine 5'-phosphate oxidase GRF56_RS19025 PF06228 Haem utilisation ChuX/HutX GRF56_RS19035 PF01032 FecCD transport family GRF56_RS19040 PF00005 ABC transporter GRF56_RS19050 PF03575 Peptidase family S51 GRF56_RS19055 PF01894 Uncharacterised protein family UPF0047 GRF56_RS19060 PF00842 Alanine racemase, C-terminal domain GRF56_RS19060 PF01168 Alanine racemase, N-terminal domain GRF56_RS19065 PF03796 DnaB-like helicase C terminal domain GRF56_RS19065 PF00772 DnaB-like helicase N terminal domain GRF56_RS19075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GRF56_RS19080 PF09526 Probable metal-binding protein (DUF2387) GRF56_RS19090 PF01584 CheW-like domain GRF56_RS19090 PF00072 Response regulator receiver domain GRF56_RS19095 PF00561 alpha/beta hydrolase fold GRF56_RS19100 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS19100 PF01590 GAF domain GRF56_RS19100 PF00360 Phytochrome region GRF56_RS19100 PF00563 EAL domain GRF56_RS19105 PF06794 Uncharacterised protein family (UPF0270) GRF56_RS19110 PF00485 Phosphoribulokinase / Uridine kinase family GRF56_RS19125 PF02566 OsmC-like protein GRF56_RS19130 PF13545 Crp-like helix-turn-helix domain GRF56_RS19130 PF00027 Cyclic nucleotide-binding domain GRF56_RS19135 PF08241 Methyltransferase domain GRF56_RS19140 PF00267 Gram-negative porin GRF56_RS19150 PF00582 Universal stress protein family GRF56_RS19165 PF00294 pfkB family carbohydrate kinase GRF56_RS19170 PF04227 Indigoidine synthase A like protein GRF56_RS19175 PF00194 Eukaryotic-type carbonic anhydrase GRF56_RS19180 PF00561 alpha/beta hydrolase fold GRF56_RS19195 PF06877 Regulator of ribonuclease activity B GRF56_RS19200 PF03707 Bacterial signalling protein N terminal repeat GRF56_RS19200 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS19200 PF00563 EAL domain GRF56_RS19215 PF06826 Predicted Permease Membrane Region GRF56_RS19215 PF02080 TrkA-C domain GRF56_RS19220 PF03006 Haemolysin-III related GRF56_RS19225 PF00282 Pyridoxal-dependent decarboxylase conserved domain GRF56_RS19230 PF04279 Intracellular septation protein A GRF56_RS19235 PF03795 YCII-related domain GRF56_RS19240 PF00459 Inositol monophosphatase family GRF56_RS19245 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GRF56_RS19250 PF02565 Recombination protein O C terminal GRF56_RS19250 PF11967 Recombination protein O N terminal GRF56_RS19255 PF07650 KH domain GRF56_RS19255 PF01926 50S ribosome-binding GTPase GRF56_RS19260 PF14622 Ribonuclease-III-like GRF56_RS19260 PF00035 Double-stranded RNA binding motif GRF56_RS19265 PF10502 Signal peptidase, peptidase S26 GRF56_RS19270 PF00679 Elongation factor G C-terminus GRF56_RS19270 PF06421 GTP-binding protein LepA C-terminus GRF56_RS19270 PF03144 Elongation factor Tu domain 2 GRF56_RS19270 PF00009 Elongation factor Tu GTP binding domain GRF56_RS19280 PF03888 MucB/RseB N-terminal domain GRF56_RS19280 PF17188 MucB/RseB C-terminal domain GRF56_RS19285 PF03872 Anti sigma-E protein RseA, N-terminal domain GRF56_RS19285 PF03873 Anti sigma-E protein RseA, C-terminal domain GRF56_RS19290 PF04542 Sigma-70 region 2 GRF56_RS19290 PF08281 Sigma-70, region 4 GRF56_RS19295 PF00890 FAD binding domain GRF56_RS19295 PF02910 Fumarate reductase flavoprotein C-term GRF56_RS19305 PF03937 Flavinator of succinate dehydrogenase GRF56_RS19310 PF01571 Aminomethyltransferase folate-binding domain GRF56_RS19315 PF03466 LysR substrate binding domain GRF56_RS19315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS19330 PF03091 CutA1 divalent ion tolerance protein GRF56_RS19335 PF02683 Cytochrome C biogenesis protein transmembrane region GRF56_RS19335 PF11412 Disulphide bond corrector protein DsbC GRF56_RS19350 PF01266 FAD dependent oxidoreductase GRF56_RS19355 PF01116 Fructose-bisphosphate aldolase class-II GRF56_RS19360 PF00162 Phosphoglycerate kinase GRF56_RS19365 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GRF56_RS19365 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GRF56_RS19370 PF00480 ROK family GRF56_RS19375 PF01208 Uroporphyrinogen decarboxylase (URO-D) GRF56_RS19380 PF00293 NUDIX domain GRF56_RS19380 PF09297 NADH pyrophosphatase zinc ribbon domain GRF56_RS19385 PF01619 Proline dehydrogenase GRF56_RS19385 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GRF56_RS19385 PF14850 DNA-binding domain of Proline dehydrogenase GRF56_RS19385 PF00171 Aldehyde dehydrogenase family GRF56_RS19390 PF08239 Bacterial SH3 domain GRF56_RS19395 PF00027 Cyclic nucleotide-binding domain GRF56_RS19395 PF00520 Ion transport protein GRF56_RS19400 PF00672 HAMP domain GRF56_RS19400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS19405 PF03710 Glutamate-ammonia ligase adenylyltransferase GRF56_RS19405 PF08335 GlnD PII-uridylyltransferase GRF56_RS19430 PF00486 Transcriptional regulatory protein, C terminal GRF56_RS19430 PF00072 Response regulator receiver domain GRF56_RS19445 PF00293 NUDIX domain GRF56_RS19445 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain GRF56_RS19445 PF09297 NADH pyrophosphatase zinc ribbon domain GRF56_RS19470 PF03060 Nitronate monooxygenase GRF56_RS19475 PF00445 Ribonuclease T2 family GRF56_RS19485 PF03150 Di-haem cytochrome c peroxidase GRF56_RS19485 PF00034 Cytochrome c GRF56_RS19490 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase GRF56_RS19500 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS19505 PF00271 Helicase conserved C-terminal domain GRF56_RS19505 PF00270 DEAD/DEAH box helicase GRF56_RS19515 PF00753 Metallo-beta-lactamase superfamily GRF56_RS19530 PF01425 Amidase GRF56_RS19535 PF04371 Porphyromonas-type peptidyl-arginine deiminase GRF56_RS19540 PF03466 LysR substrate binding domain GRF56_RS19540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS19550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GRF56_RS19555 PF04545 Sigma-70, region 4 GRF56_RS19555 PF04542 Sigma-70 region 2 GRF56_RS19555 PF00140 Sigma-70 factor, region 1.2 GRF56_RS19555 PF04539 Sigma-70 region 3 GRF56_RS19560 PF01476 LysM domain GRF56_RS19560 PF01551 Peptidase family M23 GRF56_RS19565 PF09335 SNARE associated Golgi protein GRF56_RS19575 PF01975 Survival protein SurE GRF56_RS19580 PF01142 tRNA pseudouridine synthase D (TruD) GRF56_RS19585 PF02542 YgbB family GRF56_RS19590 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GRF56_RS19595 PF04977 Septum formation initiator GRF56_RS19600 PF00474 Sodium:solute symporter family GRF56_RS19610 PF17969 L,D-transpeptidase C-terminal domain GRF56_RS19610 PF03734 L,D-transpeptidase catalytic domain GRF56_RS19615 PF00924 Mechanosensitive ion channel GRF56_RS19620 PF00871 Acetokinase family GRF56_RS19625 PF04074 YhcH/YjgK/YiaL GRF56_RS19635 PF01177 Asp/Glu/Hydantoin racemase GRF56_RS19640 PF01810 LysE type translocator GRF56_RS19650 PF00392 Bacterial regulatory proteins, gntR family GRF56_RS19650 PF00155 Aminotransferase class I and II GRF56_RS19670 PF00005 ABC transporter GRF56_RS19670 PF12848 ABC transporter GRF56_RS19680 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GRF56_RS19725 PF03952 Enolase, N-terminal domain GRF56_RS19725 PF00113 Enolase, C-terminal TIM barrel domain GRF56_RS19730 PF06418 CTP synthase N-terminus GRF56_RS19730 PF00117 Glutamine amidotransferase class-I GRF56_RS19735 PF03819 MazG nucleotide pyrophosphohydrolase domain GRF56_RS19740 PF04607 Region found in RelA / SpoT proteins GRF56_RS19740 PF02824 TGS domain GRF56_RS19740 PF13291 ACT domain GRF56_RS19745 PF05958 tRNA (Uracil-5-)-methyltransferase GRF56_RS19745 PF01938 TRAM domain GRF56_RS19750 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GRF56_RS19750 PF00072 Response regulator receiver domain GRF56_RS19750 PF01627 Hpt domain GRF56_RS19750 PF00512 His Kinase A (phospho-acceptor) domain GRF56_RS19750 PF00672 HAMP domain GRF56_RS19750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS19755 PF07308 Protein of unknown function (DUF1456) GRF56_RS19760 PF01510 N-acetylmuramoyl-L-alanine amidase GRF56_RS19765 PF00210 Ferritin-like domain GRF56_RS19770 PF03063 Prismane/CO dehydrogenase family GRF56_RS19775 PF00970 Oxidoreductase FAD-binding domain GRF56_RS19775 PF00111 2Fe-2S iron-sulfur cluster binding domain GRF56_RS19775 PF00175 Oxidoreductase NAD-binding domain GRF56_RS19780 PF01370 NAD dependent epimerase/dehydratase family GRF56_RS19785 PF01569 PAP2 superfamily GRF56_RS19790 PF02875 Mur ligase family, glutamate ligase domain GRF56_RS19790 PF08245 Mur ligase middle domain GRF56_RS19790 PF01225 Mur ligase family, catalytic domain GRF56_RS19795 PF02441 Flavoprotein GRF56_RS19800 PF00440 Bacterial regulatory proteins, tetR family GRF56_RS19805 PF00156 Phosphoribosyl transferase domain GRF56_RS19810 PF00005 ABC transporter GRF56_RS19815 PF01061 ABC-2 type transporter GRF56_RS19820 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component GRF56_RS19825 PF01869 BadF/BadG/BcrA/BcrD ATPase family GRF56_RS19855 PF02569 Pantoate-beta-alanine ligase GRF56_RS19860 PF02548 Ketopantoate hydroxymethyltransferase GRF56_RS19865 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GRF56_RS19870 PF12627 Probable RNA and SrmB- binding site of polymerase A GRF56_RS19870 PF12626 Polymerase A arginine-rich C-terminus GRF56_RS19870 PF01743 Poly A polymerase head domain GRF56_RS19875 PF00749 tRNA synthetases class I (E and Q), catalytic domain GRF56_RS19880 PF01258 Prokaryotic dksA/traR C4-type zinc finger GRF56_RS19885 PF03749 Sugar fermentation stimulation protein RE domain GRF56_RS19885 PF17746 SfsA N-terminal OB domain GRF56_RS19895 PF00271 Helicase conserved C-terminal domain GRF56_RS19895 PF08482 ATP-dependent helicase C-terminal GRF56_RS19895 PF00270 DEAD/DEAH box helicase GRF56_RS19895 PF04408 Helicase associated domain (HA2) GRF56_RS19900 PF14814 Bifunctional transglycosylase second domain GRF56_RS19900 PF00905 Penicillin binding protein transpeptidase domain GRF56_RS19900 PF00912 Transglycosylase GRF56_RS19905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GRF56_RS19910 PF00893 Small Multidrug Resistance protein GRF56_RS19915 PF00893 Small Multidrug Resistance protein GRF56_RS19925 PF11849 Domain of unknown function (DUF3369) GRF56_RS19930 PF00719 Inorganic pyrophosphatase GRF56_RS19945 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) GRF56_RS19960 PF00005 ABC transporter GRF56_RS19980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS19980 PF08447 PAS fold GRF56_RS20010 PF03600 Citrate transporter GRF56_RS20010 PF02080 TrkA-C domain GRF56_RS20015 PF00009 Elongation factor Tu GTP binding domain GRF56_RS20020 PF01507 Phosphoadenosine phosphosulfate reductase family GRF56_RS20025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GRF56_RS20025 PF14824 Sirohaem biosynthesis protein central GRF56_RS20025 PF10414 Sirohaem synthase dimerisation region GRF56_RS20030 PF01145 SPFH domain / Band 7 family GRF56_RS20030 PF16200 C-terminal region of band_7 GRF56_RS20035 PF01957 NfeD-like C-terminal, partner-binding GRF56_RS20040 PF00672 HAMP domain GRF56_RS20040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS20045 PF02445 Quinolinate synthetase A protein GRF56_RS20050 PF01263 Aldose 1-epimerase GRF56_RS20055 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GRF56_RS20055 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GRF56_RS20060 PF02446 4-alpha-glucanotransferase GRF56_RS20065 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GRF56_RS20065 PF00128 Alpha amylase, catalytic domain GRF56_RS20065 PF02806 Alpha amylase, C-terminal all-beta domain GRF56_RS20070 PF00128 Alpha amylase, catalytic domain GRF56_RS20070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GRF56_RS20075 PF01641 SelR domain GRF56_RS20085 PF00293 NUDIX domain GRF56_RS20085 PF13344 Haloacid dehalogenase-like hydrolase GRF56_RS20100 PF01037 Lrp/AsnC ligand binding domain GRF56_RS20110 PF07690 Major Facilitator Superfamily GRF56_RS20130 PF00209 Sodium:neurotransmitter symporter family GRF56_RS20140 PF00209 Sodium:neurotransmitter symporter family GRF56_RS20205 PF13174 Tetratricopeptide repeat GRF56_RS20205 PF16331 TolA binding protein trimerisation GRF56_RS20210 PF00691 OmpA family GRF56_RS20215 PF04052 TolB amino-terminal domain GRF56_RS20215 PF07676 WD40-like Beta Propeller Repeat GRF56_RS20225 PF02472 Biopolymer transport protein ExbD/TolR GRF56_RS20230 PF01618 MotA/TolQ/ExbB proton channel family GRF56_RS20235 PF03061 Thioesterase superfamily GRF56_RS20240 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) GRF56_RS20245 PF08173 Membrane bound YbgT-like protein GRF56_RS20250 PF02322 Cytochrome bd terminal oxidase subunit II GRF56_RS20255 PF01654 Cytochrome bd terminal oxidase subunit I GRF56_RS20260 PF17864 RuvB AAA lid domain GRF56_RS20260 PF05496 Holliday junction DNA helicase RuvB P-loop domain GRF56_RS20260 PF05491 RuvB C-terminal winged helix domain GRF56_RS20265 PF07499 RuvA, C-terminal domain GRF56_RS20265 PF01330 RuvA N terminal domain GRF56_RS20270 PF00672 HAMP domain GRF56_RS20270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS20275 PF01810 LysE type translocator GRF56_RS20280 PF00196 Bacterial regulatory proteins, luxR family GRF56_RS20280 PF03472 Autoinducer binding domain GRF56_RS20285 PF00765 Autoinducer synthase GRF56_RS20290 PF03466 LysR substrate binding domain GRF56_RS20290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS20295 PF08206 Ribonuclease B OB domain GRF56_RS20295 PF17876 Cold shock domain GRF56_RS20295 PF00773 RNB domain GRF56_RS20300 PF00360 Phytochrome region GRF56_RS20300 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS20300 PF01590 GAF domain GRF56_RS20300 PF00563 EAL domain GRF56_RS20310 PF13419 Haloacid dehalogenase-like hydrolase GRF56_RS20315 PF17209 Hfq protein GRF56_RS20320 PF04403 Paraquat-inducible protein A GRF56_RS20325 PF02470 MlaD protein GRF56_RS20335 PF05958 tRNA (Uracil-5-)-methyltransferase GRF56_RS20335 PF01938 TRAM domain GRF56_RS20340 PF04073 Aminoacyl-tRNA editing domain GRF56_RS20340 PF03129 Anticodon binding domain GRF56_RS20340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GRF56_RS20345 PF00106 short chain dehydrogenase GRF56_RS20360 PF00378 Enoyl-CoA hydratase/isomerase GRF56_RS20365 PF10952 Protein of unknown function (DUF2753) GRF56_RS20370 PF00132 Bacterial transferase hexapeptide (six repeats) GRF56_RS20380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GRF56_RS20390 PF08447 PAS fold GRF56_RS20390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS20395 PF01207 Dihydrouridine synthase (Dus) GRF56_RS20400 PF01475 Ferric uptake regulator family GRF56_RS20415 PF05525 Branched-chain amino acid transport protein GRF56_RS20420 PF05525 Branched-chain amino acid transport protein GRF56_RS20425 PF05175 Methyltransferase small domain GRF56_RS20430 PF00270 DEAD/DEAH box helicase GRF56_RS20430 PF00271 Helicase conserved C-terminal domain GRF56_RS20435 PF13673 Acetyltransferase (GNAT) domain GRF56_RS20445 PF00588 SpoU rRNA Methylase family GRF56_RS20445 PF08032 RNA 2'-O ribose methyltransferase substrate binding GRF56_RS20450 PF17876 Cold shock domain GRF56_RS20450 PF08461 Ribonuclease R winged-helix domain GRF56_RS20450 PF00575 S1 RNA binding domain GRF56_RS20450 PF00773 RNB domain GRF56_RS20450 PF08206 Ribonuclease B OB domain GRF56_RS20455 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS20460 PF00691 OmpA family GRF56_RS20460 PF01389 OmpA-like transmembrane domain GRF56_RS20465 PF00657 GDSL-like Lipase/Acylhydrolase GRF56_RS20470 PF04076 Bacterial OB fold (BOF) protein GRF56_RS20475 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GRF56_RS20475 PF01464 Transglycosylase SLT domain GRF56_RS20480 PF04362 Bacterial Fe(2+) trafficking GRF56_RS20485 PF00730 HhH-GPD superfamily base excision DNA repair protein GRF56_RS20485 PF10576 Iron-sulfur binding domain of endonuclease III GRF56_RS20485 PF00633 Helix-hairpin-helix motif GRF56_RS20485 PF14815 NUDIX domain GRF56_RS20490 PF01743 Poly A polymerase head domain GRF56_RS20490 PF12627 Probable RNA and SrmB- binding site of polymerase A GRF56_RS20490 PF01966 HD domain GRF56_RS20495 PF02028 BCCT, betaine/carnitine/choline family transporter GRF56_RS20510 PF04222 Protein of unknown function (DUF416) GRF56_RS20515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GRF56_RS20520 PF08525 Opacity-associated protein A N-terminal motif GRF56_RS20520 PF01551 Peptidase family M23 GRF56_RS20520 PF01476 LysM domain GRF56_RS20540 PF01297 Zinc-uptake complex component A periplasmic GRF56_RS20545 PF00005 ABC transporter GRF56_RS20550 PF00950 ABC 3 transport family GRF56_RS20555 PF03466 LysR substrate binding domain GRF56_RS20555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS20560 PF00892 EamA-like transporter family GRF56_RS20565 PF03167 Uracil DNA glycosylase superfamily GRF56_RS20570 PF00892 EamA-like transporter family GRF56_RS20580 PF01541 GIY-YIG catalytic domain GRF56_RS20595 PF04012 PspA/IM30 family GRF56_RS20600 PF01553 Acyltransferase GRF56_RS20620 PF00578 AhpC/TSA family GRF56_RS20625 PF03466 LysR substrate binding domain GRF56_RS20625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS20630 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GRF56_RS20630 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GRF56_RS20640 PF00226 DnaJ domain GRF56_RS20640 PF01556 DnaJ C terminal domain GRF56_RS20640 PF00684 DnaJ central domain GRF56_RS20660 PF00854 POT family GRF56_RS20665 PF07690 Major Facilitator Superfamily GRF56_RS20670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GRF56_RS20670 PF03466 LysR substrate binding domain GRF56_RS20680 PF00521 DNA gyrase/topoisomerase IV, subunit A GRF56_RS20680 PF03989 DNA gyrase C-terminal domain, beta-propeller GRF56_RS20685 PF00986 DNA gyrase B subunit, carboxyl terminus GRF56_RS20685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GRF56_RS20685 PF00204 DNA gyrase B GRF56_RS20685 PF01751 Toprim domain GRF56_RS20690 PF05728 Uncharacterised protein family (UPF0227) GRF56_RS20695 PF00149 Calcineurin-like phosphoesterase GRF56_RS20700 PF06853 Protein of unknown function (DUF1249) GRF56_RS20705 PF00293 NUDIX domain GRF56_RS20710 PF02321 Outer membrane efflux protein GRF56_RS20715 PF00294 pfkB family carbohydrate kinase GRF56_RS20715 PF01467 Cytidylyltransferase-like GRF56_RS20720 PF03279 Bacterial lipid A biosynthesis acyltransferase GRF56_RS20725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GRF56_RS20725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GRF56_RS20725 PF02378 Phosphotransferase system, EIIC GRF56_RS20730 PF08125 Mannitol dehydrogenase C-terminal domain GRF56_RS20730 PF01232 Mannitol dehydrogenase Rossmann domain GRF56_RS20735 PF05068 Mannitol repressor GRF56_RS20760 PF01544 CorA-like Mg2+ transporter protein GRF56_RS20765 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GRF56_RS20770 PF04307 LexA-binding, inner membrane-associated putative hydrolase GRF56_RS20780 PF01773 Na+ dependent nucleoside transporter N-terminus GRF56_RS20780 PF07662 Na+ dependent nucleoside transporter C-terminus GRF56_RS20780 PF07670 Nucleoside recognition GRF56_RS20785 PF00271 Helicase conserved C-terminal domain GRF56_RS20785 PF00270 DEAD/DEAH box helicase GRF56_RS20785 PF03880 DbpA RNA binding domain GRF56_RS20805 PF01040 UbiA prenyltransferase family GRF56_RS20810 PF00425 chorismate binding enzyme GRF56_RS20815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GRF56_RS20815 PF16582 Middle domain of thiamine pyrophosphate GRF56_RS20815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GRF56_RS20820 PF12697 Alpha/beta hydrolase family GRF56_RS20825 PF00378 Enoyl-CoA hydratase/isomerase GRF56_RS20830 PF13378 Enolase C-terminal domain-like GRF56_RS20835 PF00501 AMP-binding enzyme GRF56_RS20845 PF00419 Fimbrial protein GRF56_RS20850 PF00419 Fimbrial protein GRF56_RS20855 PF02753 Pili assembly chaperone PapD, C-terminal domain GRF56_RS20855 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GRF56_RS20860 PF00577 Outer membrane usher protein GRF56_RS20860 PF13954 PapC N-terminal domain GRF56_RS20860 PF13953 PapC C-terminal domain GRF56_RS20870 PF00419 Fimbrial protein GRF56_RS20880 PF08453 Peptidase family M9 N-terminal GRF56_RS20880 PF01752 Collagenase GRF56_RS20885 PF02698 DUF218 domain GRF56_RS20890 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GRF56_RS20890 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GRF56_RS20900 PF01584 CheW-like domain GRF56_RS20900 PF00072 Response regulator receiver domain GRF56_RS20905 PF00106 short chain dehydrogenase GRF56_RS20910 PF08351 Domain of unknown function (DUF1726) GRF56_RS20910 PF13718 GNAT acetyltransferase 2 GRF56_RS20910 PF05127 Helicase GRF56_RS20910 PF17176 tRNA-binding domain GRF56_RS20925 PF00210 Ferritin-like domain GRF56_RS20930 PF02142 MGS-like domain GRF56_RS20935 PF00465 Iron-containing alcohol dehydrogenase GRF56_RS20945 PF03577 Peptidase family C69 GRF56_RS20950 PF00106 short chain dehydrogenase GRF56_RS20970 PF16657 Maltogenic Amylase, C-terminal domain GRF56_RS20970 PF00128 Alpha amylase, catalytic domain GRF56_RS20970 PF02903 Alpha amylase, N-terminal ig-like domain GRF56_RS20990 PF00884 Sulfatase GRF56_RS20995 PF01037 Lrp/AsnC ligand binding domain GRF56_RS21005 PF04204 Homoserine O-succinyltransferase GRF56_RS21010 PF01966 HD domain GRF56_RS21010 PF12072 Domain of unknown function (DUF3552) GRF56_RS21010 PF00013 KH domain GRF56_RS21015 PF02464 Competence-damaged protein GRF56_RS21015 PF00994 Probable molybdopterin binding domain GRF56_RS21035 PF04363 Protein of unknown function (DUF496) GRF56_RS21075 PF01381 Helix-turn-helix GRF56_RS21075 PF07883 Cupin domain GRF56_RS21080 PF03594 Benzoate membrane transport protein GRF56_RS21090 PF02219 Methylenetetrahydrofolate reductase GRF56_RS21105 PF00672 HAMP domain GRF56_RS21105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS21110 PF03922 OmpW family GRF56_RS21115 PF17158 Membrane-associated sensor, integral membrane domain GRF56_RS21115 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS21120 PF17755 UvrA DNA-binding domain GRF56_RS21120 PF17760 UvrA interaction domain GRF56_RS21120 PF00005 ABC transporter GRF56_RS21140 PF03783 Curli production assembly/transport component CsgG GRF56_RS21150 PF10627 Curli assembly protein CsgE GRF56_RS21155 PF00196 Bacterial regulatory proteins, luxR family GRF56_RS21160 PF00436 Single-strand binding protein family GRF56_RS21175 PF01545 Cation efflux family GRF56_RS21175 PF16916 Dimerisation domain of Zinc Transporter GRF56_RS21185 PF00313 'Cold-shock' DNA-binding domain GRF56_RS21190 PF00860 Permease family GRF56_RS21195 PF02733 Dak1 domain GRF56_RS21200 PF02734 DAK2 domain GRF56_RS21205 PF00381 PTS HPr component phosphorylation site GRF56_RS21205 PF00391 PEP-utilising enzyme, mobile domain GRF56_RS21205 PF05524 PEP-utilising enzyme, N-terminal GRF56_RS21205 PF03610 PTS system fructose IIA component GRF56_RS21210 PF00465 Iron-containing alcohol dehydrogenase GRF56_RS21215 PF00989 PAS fold GRF56_RS21215 PF00158 Sigma-54 interaction domain GRF56_RS21215 PF02954 Bacterial regulatory protein, Fis family GRF56_RS21235 PF01594 AI-2E family transporter GRF56_RS21240 PF00293 NUDIX domain GRF56_RS21250 PF01479 S4 domain GRF56_RS21255 PF01430 Hsp33 protein GRF56_RS21265 PF00392 Bacterial regulatory proteins, gntR family GRF56_RS21270 PF01321 Creatinase/Prolidase N-terminal domain GRF56_RS21270 PF00557 Metallopeptidase family M24 GRF56_RS21275 PF11756 Nitrous oxide-stimulated promoter GRF56_RS21280 PF00583 Acetyltransferase (GNAT) family GRF56_RS21285 PF05433 Glycine zipper 2TM domain GRF56_RS21290 PF00909 Ammonium Transporter Family GRF56_RS21295 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS21305 PF06055 Exopolysaccharide synthesis, ExoD GRF56_RS21340 PF02660 Glycerol-3-phosphate acyltransferase GRF56_RS21345 PF02152 Dihydroneopterin aldolase GRF56_RS21350 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GRF56_RS21360 PF07690 Major Facilitator Superfamily GRF56_RS21370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GRF56_RS21370 PF00529 HlyD membrane-fusion protein of T1SS GRF56_RS21375 PF00873 AcrB/AcrD/AcrF family GRF56_RS21380 PF02492 CobW/HypB/UreG, nucleotide-binding domain GRF56_RS21380 PF07683 Cobalamin synthesis protein cobW C-terminal domain GRF56_RS21390 PF12792 CSS motif domain associated with EAL GRF56_RS21390 PF00563 EAL domain GRF56_RS21395 PF00330 Aconitase family (aconitate hydratase) GRF56_RS21395 PF11791 Aconitate B N-terminal domain GRF56_RS21395 PF06434 Aconitate hydratase 2 N-terminus GRF56_RS21400 PF01734 Patatin-like phospholipase GRF56_RS21405 PF12729 Four helix bundle sensory module for signal transduction GRF56_RS21405 PF00672 HAMP domain GRF56_RS21405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GRF56_RS21410 PF03707 Bacterial signalling protein N terminal repeat GRF56_RS21410 PF00563 EAL domain GRF56_RS21410 PF00990 Diguanylate cyclase, GGDEF domain GRF56_RS21415 PF07992 Pyridine nucleotide-disulphide oxidoreductase GRF56_RS21415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GRF56_RS21420 PF02817 e3 binding domain GRF56_RS21420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GRF56_RS21420 PF00364 Biotin-requiring enzyme GRF56_RS21425 PF17831 Pyruvate dehydrogenase E1 component middle domain GRF56_RS21425 PF00456 Transketolase, thiamine diphosphate binding domain GRF56_RS21430 PF00392 Bacterial regulatory proteins, gntR family GRF56_RS21430 PF07729 FCD domain GRF56_RS21435 PF01510 N-acetylmuramoyl-L-alanine amidase GRF56_RS21445 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GRF56_RS21445 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GRF56_RS21450 PF07963 Prokaryotic N-terminal methylation motif GRF56_RS21455 PF00437 Type II/IV secretion system protein GRF56_RS21455 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GRF56_RS21460 PF00482 Type II secretion system (T2SS), protein F GRF56_RS21465 PF06750 Bacterial Peptidase A24 N-terminal domain GRF56_RS21465 PF01478 Type IV leader peptidase family GRF56_RS21470 PF01121 Dephospho-CoA kinase GRF56_RS21475 PF07072 Cell division protein GRF56_RS21480 PF03884 DNA gyrase inhibitor YacG GRF56_RS21485 PF00293 NUDIX domain GRF56_RS21490 PF01043 SecA preprotein cross-linking domain GRF56_RS21490 PF07516 SecA Wing and Scaffold domain GRF56_RS21490 PF07517 SecA DEAD-like domain GRF56_RS21490 PF02810 SEC-C motif GRF56_RS21500 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GRF56_RS21505 PF00091 Tubulin/FtsZ family, GTPase domain GRF56_RS21505 PF12327 FtsZ family, C-terminal domain GRF56_RS21510 PF02491 SHS2 domain inserted in FTSA GRF56_RS21515 PF03799 Cell division protein FtsQ GRF56_RS21515 PF08478 POTRA domain, FtsQ-type GRF56_RS21520 PF01225 Mur ligase family, catalytic domain GRF56_RS21520 PF02875 Mur ligase family, glutamate ligase domain GRF56_RS21520 PF08245 Mur ligase middle domain GRF56_RS21525 PF04101 Glycosyltransferase family 28 C-terminal domain GRF56_RS21525 PF03033 Glycosyltransferase family 28 N-terminal domain GRF56_RS21530 PF01098 Cell cycle protein GRF56_RS21535 PF02875 Mur ligase family, glutamate ligase domain GRF56_RS21535 PF08245 Mur ligase middle domain GRF56_RS21540 PF00953 Glycosyl transferase family 4 GRF56_RS21540 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GRF56_RS21545 PF01225 Mur ligase family, catalytic domain GRF56_RS21545 PF02875 Mur ligase family, glutamate ligase domain GRF56_RS21545 PF08245 Mur ligase middle domain GRF56_RS21550 PF08245 Mur ligase middle domain GRF56_RS21550 PF02875 Mur ligase family, glutamate ligase domain GRF56_RS21550 PF01225 Mur ligase family, catalytic domain GRF56_RS21555 PF03717 Penicillin-binding Protein dimerisation domain GRF56_RS21555 PF00905 Penicillin binding protein transpeptidase domain GRF56_RS21560 PF04999 Cell division protein FtsL GRF56_RS21565 PF01795 MraW methylase family GRF56_RS21570 PF02381 MraZ protein, putative antitoxin-like GRF56_RS21580 PF01476 LysM domain GRF56_RS21580 PF01464 Transglycosylase SLT domain GRF56_RS21590 PF13677 Membrane MotB of proton-channel complex MotA/MotB GRF56_RS21590 PF00691 OmpA family GRF56_RS21595 PF01618 MotA/TolQ/ExbB proton channel family GRF56_RS21600 PF04542 Sigma-70 region 2 GRF56_RS21600 PF04545 Sigma-70, region 4 GRF56_RS21620 PF02561 Flagellar protein FliS GRF56_RS21625 PF02465 Flagellar hook-associated protein 2 N-terminus GRF56_RS21625 PF07195 Flagellar hook-associated protein 2 C-terminus GRF56_RS21625 PF07196 Flagellin hook IN motif GRF56_RS21630 PF00669 Bacterial flagellin N-terminal helical region GRF56_RS21630 PF00700 Bacterial flagellin C-terminal helical region GRF56_RS21640 PF00669 Bacterial flagellin N-terminal helical region GRF56_RS21645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GRF56_RS21645 PF00460 Flagella basal body rod protein GRF56_RS21655 PF02119 Flagellar P-ring protein GRF56_RS21660 PF02107 Flagellar L-ring protein GRF56_RS21665 PF00460 Flagella basal body rod protein GRF56_RS21665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GRF56_RS21670 PF00460 Flagella basal body rod protein GRF56_RS21670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GRF56_RS21675 PF00460 Flagella basal body rod protein GRF56_RS21675 PF07559 Flagellar basal body protein FlaE GRF56_RS21675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GRF56_RS21680 PF03963 Flagellar hook capping protein - N-terminal region GRF56_RS21680 PF13860 FlgD Ig-like domain GRF56_RS21680 PF13861 FlgD Tudor-like domain GRF56_RS21685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GRF56_RS21685 PF00460 Flagella basal body rod protein GRF56_RS21690 PF00460 Flagella basal body rod protein GRF56_RS21695 PF13144 Chaperone for flagella basal body P-ring formation GRF56_RS21715 PF18269 T3SS EscN ATPase C-terminal domain GRF56_RS21715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GRF56_RS21725 PF01706 FliG C-terminal domain GRF56_RS21725 PF14841 FliG middle domain GRF56_RS21725 PF14842 FliG N-terminal domain GRF56_RS21730 PF08345 Flagellar M-ring protein C-terminal GRF56_RS21730 PF01514 Secretory protein of YscJ/FliF family GRF56_RS21735 PF02049 Flagellar hook-basal body complex protein FliE GRF56_RS21740 PF02954 Bacterial regulatory protein, Fis family GRF56_RS21740 PF00158 Sigma-54 interaction domain GRF56_RS21740 PF00072 Response regulator receiver domain GRF56_RS21745 PF00771 FHIPEP family GRF56_RS21750 PF01312 FlhB HrpN YscU SpaS Family GRF56_RS21755 PF01311 Bacterial export proteins, family 1 GRF56_RS21760 PF01313 Bacterial export proteins, family 3 GRF56_RS21765 PF00813 FliP family GRF56_RS21770 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GRF56_RS21785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GRF56_RS21790 PF04348 LppC putative lipoprotein GRF56_RS21795 PF02021 Uncharacterised protein family UPF0102 GRF56_RS21800 PF13580 SIS domain GRF56_RS21805 PF04972 BON domain GRF56_RS21810 PF04386 Stringent starvation protein B GRF56_RS21815 PF02798 Glutathione S-transferase, N-terminal domain GRF56_RS21815 PF00043 Glutathione S-transferase, C-terminal domain GRF56_RS21820 PF02167 Cytochrome C1 family GRF56_RS21825 PF00033 Cytochrome b/b6/petB GRF56_RS21825 PF00032 Cytochrome b(C-terminal)/b6/petD GRF56_RS21830 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GRF56_RS21830 PF00355 Rieske [2Fe-2S] domain GRF56_RS21835 PF00380 Ribosomal protein S9/S16 GRF56_RS21840 PF00572 Ribosomal protein L13 GRF56_RS21845 PF03969 AFG1-like ATPase GRF56_RS21855 PF13180 PDZ domain GRF56_RS21855 PF00595 PDZ domain GRF56_RS21860 PF13180 PDZ domain GRF56_RS21890 PF01979 Amidohydrolase family GRF56_RS21895 PF03841 L-seryl-tRNA selenium transferase GRF56_RS21900 PF07071 KDGP aldolase GRF56_RS21905 PF08279 HTH domain GRF56_RS21905 PF00874 PRD domain GRF56_RS21905 PF05043 Mga helix-turn-helix domain GRF56_RS21905 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GRF56_RS21910 PF00381 PTS HPr component phosphorylation site GRF56_RS21915 PF03668 P-loop ATPase protein family GRF56_RS21920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GRF56_RS21925 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GRF56_RS21930 PF04552 Sigma-54, DNA binding domain GRF56_RS21930 PF04963 Sigma-54 factor, core binding domain GRF56_RS21930 PF00309 Sigma-54 factor, Activator interacting domain (AID) GRF56_RS21935 PF00005 ABC transporter GRF56_RS21935 PF12399 Branched-chain amino acid ATP-binding cassette transporter GRF56_RS21940 PF03968 OstA-like protein GRF56_RS21945 PF06835 Lipopolysaccharide-assembly, LptC-related GRF56_RS21955 PF00571 CBS domain GRF56_RS21955 PF01380 SIS domain GRF56_RS21960 PF00005 ABC transporter GRF56_RS21965 PF02405 Permease MlaE GRF56_RS21970 PF02470 MlaD protein GRF56_RS21975 PF05494 MlaC protein GRF56_RS21985 PF01722 BolA-like protein GRF56_RS21990 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GRF56_RS21995 PF01523 Putative modulator of DNA gyrase GRF56_RS22000 PF04751 Protein of unknown function (DUF615) GRF56_RS22005 PF07722 Peptidase C26 GRF56_RS22015 PF00027 Cyclic nucleotide-binding domain GRF56_RS22015 PF13545 Crp-like helix-turn-helix domain GRF56_RS22025 PF13419 Haloacid dehalogenase-like hydrolase GRF56_RS22030 PF02899 Phage integrase, N-terminal SAM-like domain GRF56_RS22030 PF00589 Phage integrase family GRF56_RS22040 PF01678 Diaminopimelate epimerase GRF56_RS22045 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GRF56_RS22045 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GRF56_RS22055 PF01491 Frataxin-like domain GRF56_RS22060 PF02230 Phospholipase/Carboxylesterase GRF56_RS22065 PF01295 Adenylate cyclase, class-I GRF56_RS22065 PF12633 Adenylate cyclase NT domain GRF56_RS22070 PF03900 Porphobilinogen deaminase, C-terminal domain GRF56_RS22070 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GRF56_RS22075 PF02602 Uroporphyrinogen-III synthase HemD GRF56_RS22080 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase GRF56_RS22095 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GRF56_RS22115 PF13520 Amino acid permease GRF56_RS22120 PF00768 D-alanyl-D-alanine carboxypeptidase GRF56_RS22130 PF07715 TonB-dependent Receptor Plug Domain GRF56_RS22130 PF00593 TonB dependent receptor GRF56_RS22140 PF02899 Phage integrase, N-terminal SAM-like domain GRF56_RS22140 PF00589 Phage integrase family GRF56_RS22155 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GRF56_RS22155 PF01653 NAD-dependent DNA ligase adenylation domain GRF56_RS22155 PF03120 NAD-dependent DNA ligase OB-fold domain GRF56_RS22155 PF12826 Helix-hairpin-helix motif GRF56_RS22155 PF00533 BRCA1 C Terminus (BRCT) domain GRF56_RS22160 PF01381 Helix-turn-helix GRF56_RS22220 PF05840 Bacteriophage replication gene A protein (GPA)