locus-tag class description KW556_RS00005 PF00308 Bacterial dnaA protein KW556_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix KW556_RS00005 PF11638 DnaA N-terminal domain KW556_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KW556_RS00010 PF02767 DNA polymerase III beta subunit, central domain KW556_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KW556_RS00015 PF02463 RecF/RecN/SMC N terminal domain KW556_RS00020 PF00204 DNA gyrase B KW556_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus KW556_RS00020 PF18053 DNA gyrase B subunit insert domain KW556_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS00020 PF01751 Toprim domain KW556_RS00030 PF08279 HTH domain KW556_RS00030 PF13280 WYL domain KW556_RS00040 PF12706 Beta-lactamase superfamily domain KW556_RS00045 PF00011 Hsp20/alpha crystallin family KW556_RS00050 PF00011 Hsp20/alpha crystallin family KW556_RS00055 PF00155 Aminotransferase class I and II KW556_RS00070 PF07690 Major Facilitator Superfamily KW556_RS00075 PF00072 Response regulator receiver domain KW556_RS00075 PF00486 Transcriptional regulatory protein, C terminal KW556_RS00080 PF13493 Domain of unknown function (DUF4118) KW556_RS00080 PF13492 GAF domain KW556_RS00080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS00080 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS00080 PF02702 Osmosensitive K+ channel His kinase sensor domain KW556_RS00085 PF02669 K+-transporting ATPase, c chain KW556_RS00095 PF03814 Potassium-transporting ATPase A subunit KW556_RS00100 PF07992 Pyridine nucleotide-disulphide oxidoreductase KW556_RS00100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KW556_RS00105 PF00497 Bacterial extracellular solute-binding proteins, family 3 KW556_RS00105 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS00110 PF00873 AcrB/AcrD/AcrF family KW556_RS00115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KW556_RS00120 PF00440 Bacterial regulatory proteins, tetR family KW556_RS00150 PF00224 Pyruvate kinase, barrel domain KW556_RS00150 PF02887 Pyruvate kinase, alpha/beta domain KW556_RS00155 PF07690 Major Facilitator Superfamily KW556_RS00170 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS00170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS00170 PF02743 Cache domain KW556_RS00175 PF14532 Sigma-54 interaction domain KW556_RS00175 PF00072 Response regulator receiver domain KW556_RS00175 PF02954 Bacterial regulatory protein, Fis family KW556_RS00190 PF12146 Serine aminopeptidase, S33 KW556_RS00195 PF00132 Bacterial transferase hexapeptide (six repeats) KW556_RS00200 PF00588 SpoU rRNA Methylase family KW556_RS00200 PF12105 SpoU, rRNA methylase, C-terminal KW556_RS00205 PF02824 TGS domain KW556_RS00205 PF13291 ACT domain KW556_RS00205 PF04607 Region found in RelA / SpoT proteins KW556_RS00210 PF01192 RNA polymerase Rpb6 KW556_RS00215 PF00625 Guanylate kinase KW556_RS00220 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KW556_RS00235 PF00892 EamA-like transporter family KW556_RS00255 PF03466 LysR substrate binding domain KW556_RS00255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS00260 PF00579 tRNA synthetases class I (W and Y) KW556_RS00265 PF00582 Universal stress protein family KW556_RS00270 PF12241 Trans-2-enoyl-CoA reductase catalytic region KW556_RS00270 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KW556_RS00270 PF07055 Enoyl reductase FAD binding domain KW556_RS00275 PF00210 Ferritin-like domain KW556_RS00285 PF07694 5TMR of 5TMR-LYT KW556_RS00285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS00285 PF06580 Histidine kinase KW556_RS00290 PF00072 Response regulator receiver domain KW556_RS00290 PF04397 LytTr DNA-binding domain KW556_RS00295 PF07690 Major Facilitator Superfamily KW556_RS00300 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KW556_RS00300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KW556_RS00300 PF02222 ATP-grasp domain KW556_RS00305 PF00731 AIR carboxylase KW556_RS00320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS00320 PF03466 LysR substrate binding domain KW556_RS00325 PF00593 TonB dependent receptor KW556_RS00325 PF07715 TonB-dependent Receptor Plug Domain KW556_RS00330 PF01177 Asp/Glu/Hydantoin racemase KW556_RS00365 PF00899 ThiF family KW556_RS00370 PF02657 Fe-S metabolism associated domain KW556_RS00375 PF00266 Aminotransferase class-V KW556_RS00380 PF13361 UvrD-like helicase C-terminal domain KW556_RS00380 PF00580 UvrD/REP helicase N-terminal domain KW556_RS00385 PF03707 Bacterial signalling protein N terminal repeat KW556_RS00385 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS00385 PF00563 EAL domain KW556_RS00390 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KW556_RS00395 PF00107 Zinc-binding dehydrogenase KW556_RS00395 PF08240 Alcohol dehydrogenase GroES-like domain KW556_RS00400 PF00155 Aminotransferase class I and II KW556_RS00405 PF00440 Bacterial regulatory proteins, tetR family KW556_RS00405 PF08360 QacR-like protein, C-terminal region KW556_RS00410 PF01370 NAD dependent epimerase/dehydratase family KW556_RS00415 PF00534 Glycosyl transferases group 1 KW556_RS00425 PF04932 O-Antigen ligase KW556_RS00430 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) KW556_RS00465 PF12833 Helix-turn-helix domain KW556_RS00465 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KW556_RS00470 PF01810 LysE type translocator KW556_RS00500 PF14001 YdfZ protein KW556_RS00520 PF13614 AAA domain KW556_RS00540 PF01695 IstB-like ATP binding protein KW556_RS00545 PF00665 Integrase core domain KW556_RS00560 PF00580 UvrD/REP helicase N-terminal domain KW556_RS00560 PF13361 UvrD-like helicase C-terminal domain KW556_RS00565 PF02608 ABC transporter substrate-binding protein PnrA-like KW556_RS00570 PF00005 ABC transporter KW556_RS00575 PF02653 Branched-chain amino acid transport system / permease component KW556_RS00580 PF02653 Branched-chain amino acid transport system / permease component KW556_RS00585 PF00149 Calcineurin-like phosphoesterase KW556_RS00585 PF02872 5'-nucleotidase, C-terminal domain KW556_RS00595 PF03448 MgtE intracellular N domain KW556_RS00595 PF01769 Divalent cation transporter KW556_RS00595 PF00571 CBS domain KW556_RS00600 PF10414 Sirohaem synthase dimerisation region KW556_RS00600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KW556_RS00600 PF14824 Sirohaem biosynthesis protein central KW556_RS00605 PF01226 Formate/nitrite transporter KW556_RS00610 PF13806 Rieske-like [2Fe-2S] domain KW556_RS00620 PF07992 Pyridine nucleotide-disulphide oxidoreductase KW556_RS00620 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KW556_RS00620 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KW556_RS00620 PF18267 Rubredoxin NAD+ reductase C-terminal domain KW556_RS00620 PF04324 BFD-like [2Fe-2S] binding domain KW556_RS00635 PF00005 ABC transporter KW556_RS00640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KW556_RS00650 PF00004 ATPase family associated with various cellular activities (AAA) KW556_RS00650 PF07724 AAA domain (Cdc48 subfamily) KW556_RS00650 PF10431 C-terminal, D2-small domain, of ClpB protein KW556_RS00655 PF00227 Proteasome subunit KW556_RS00665 PF05746 DALR anticodon binding domain KW556_RS00665 PF03485 Arginyl tRNA synthetase N terminal domain KW556_RS00665 PF00750 tRNA synthetases class I (R) KW556_RS00675 PF04545 Sigma-70, region 4 KW556_RS00675 PF04542 Sigma-70 region 2 KW556_RS00685 PF02673 Bacitracin resistance protein BacA KW556_RS00690 PF01263 Aldose 1-epimerase KW556_RS00695 PF10509 Galactokinase galactose-binding signature KW556_RS00695 PF08544 GHMP kinases C terminal KW556_RS00695 PF00288 GHMP kinases N terminal domain KW556_RS00700 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KW556_RS00700 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KW556_RS00705 PF16363 GDP-mannose 4,6 dehydratase KW556_RS00710 PF00356 Bacterial regulatory proteins, lacI family KW556_RS00715 PF02837 Glycosyl hydrolases family 2, sugar binding domain KW556_RS00715 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KW556_RS00715 PF00703 Glycosyl hydrolases family 2 KW556_RS00715 PF16353 Domain of unknown function(DUF4981) KW556_RS00715 PF02929 Beta galactosidase small chain KW556_RS00720 PF13407 Periplasmic binding protein domain KW556_RS00725 PF00005 ABC transporter KW556_RS00730 PF02653 Branched-chain amino acid transport system / permease component KW556_RS00735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS00735 PF02743 Cache domain KW556_RS00735 PF00672 HAMP domain KW556_RS00740 PF05958 tRNA (Uracil-5-)-methyltransferase KW556_RS00755 PF00128 Alpha amylase, catalytic domain KW556_RS00755 PF02903 Alpha amylase, N-terminal ig-like domain KW556_RS00770 PF00012 Hsp70 protein KW556_RS00775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KW556_RS00775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KW556_RS00780 PF05981 CreA protein KW556_RS00795 PF01258 Prokaryotic dksA/traR C4-type zinc finger KW556_RS00800 PF00120 Glutamine synthetase, catalytic domain KW556_RS00805 PF00202 Aminotransferase class-III KW556_RS00810 PF13416 Bacterial extracellular solute-binding protein KW556_RS00815 PF13416 Bacterial extracellular solute-binding protein KW556_RS00820 PF00005 ABC transporter KW556_RS00820 PF08402 TOBE domain KW556_RS00825 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS00830 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS00835 PF03475 3-alpha domain KW556_RS00835 PF03473 MOSC domain KW556_RS00850 PF03061 Thioesterase superfamily KW556_RS00855 PF09382 RQC domain KW556_RS00855 PF00570 HRDC domain KW556_RS00855 PF00271 Helicase conserved C-terminal domain KW556_RS00855 PF00270 DEAD/DEAH box helicase KW556_RS00855 PF16124 RecQ zinc-binding KW556_RS00860 PF00034 Cytochrome c KW556_RS00865 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KW556_RS00875 PF02592 Putative vitamin uptake transporter KW556_RS00880 PF03737 Aldolase/RraA KW556_RS00885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS00885 PF00672 HAMP domain KW556_RS00895 PF01197 Ribosomal protein L31 KW556_RS00900 PF00271 Helicase conserved C-terminal domain KW556_RS00900 PF17764 3′ DNA-binding domain (3′BD) KW556_RS00900 PF18074 Primosomal protein N C-terminal domain KW556_RS00900 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KW556_RS00900 PF00270 DEAD/DEAH box helicase KW556_RS00910 PF11066 Protein of unknown function (DUF2867) KW556_RS00910 PF13460 NAD(P)H-binding KW556_RS00915 PF03222 Tryptophan/tyrosine permease family KW556_RS00920 PF03949 Malic enzyme, NAD binding domain KW556_RS00920 PF00390 Malic enzyme, N-terminal domain KW556_RS00925 PF03631 Virulence factor BrkB KW556_RS00930 PF02580 D-Tyr-tRNA(Tyr) deacylase KW556_RS00935 PF17284 Spermidine synthase tetramerisation domain KW556_RS00940 PF09500 Putative thioesterase (yiiD_Cterm) KW556_RS00940 PF00583 Acetyltransferase (GNAT) family KW556_RS00950 PF00270 DEAD/DEAH box helicase KW556_RS00950 PF00271 Helicase conserved C-terminal domain KW556_RS00950 PF17191 RecG wedge domain KW556_RS00955 PF13091 PLD-like domain KW556_RS00960 PF02447 GntP family permease KW556_RS00970 PF01202 Shikimate kinase KW556_RS00975 PF00920 Dehydratase family KW556_RS00980 PF01081 KDPG and KHG aldolase KW556_RS00985 PF00356 Bacterial regulatory proteins, lacI family KW556_RS00985 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KW556_RS00995 PF01551 Peptidase family M23 KW556_RS01000 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KW556_RS01000 PF01676 Metalloenzyme superfamily KW556_RS01005 PF00581 Rhodanese-like domain KW556_RS01010 PF02556 Preprotein translocase subunit SecB KW556_RS01015 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KW556_RS01015 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KW556_RS01020 PF01521 Iron-sulphur cluster biosynthesis KW556_RS01020 PF01106 NifU-like domain KW556_RS01025 PF00156 Phosphoribosyl transferase domain KW556_RS01030 PF00561 alpha/beta hydrolase fold KW556_RS01050 PF17674 HHH domain KW556_RS01050 PF09371 Tex-like protein N-terminal domain KW556_RS01050 PF00575 S1 RNA binding domain KW556_RS01050 PF16921 Tex protein YqgF-like domain KW556_RS01055 PF01272 Transcription elongation factor, GreA/GreB, C-term KW556_RS01055 PF03449 Transcription elongation factor, N-terminal KW556_RS01060 PF00072 Response regulator receiver domain KW556_RS01060 PF00486 Transcriptional regulatory protein, C terminal KW556_RS01065 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS01065 PF00672 HAMP domain KW556_RS01065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS01075 PF00338 Ribosomal protein S10p/S20e KW556_RS01080 PF00297 Ribosomal protein L3 KW556_RS01085 PF00573 Ribosomal protein L4/L1 family KW556_RS01090 PF00276 Ribosomal protein L23 KW556_RS01095 PF00181 Ribosomal Proteins L2, RNA binding domain KW556_RS01095 PF03947 Ribosomal Proteins L2, C-terminal domain KW556_RS01100 PF00203 Ribosomal protein S19 KW556_RS01105 PF00237 Ribosomal protein L22p/L17e KW556_RS01110 PF07650 KH domain KW556_RS01110 PF00189 Ribosomal protein S3, C-terminal domain KW556_RS01115 PF00252 Ribosomal protein L16p/L10e KW556_RS01120 PF00831 Ribosomal L29 protein KW556_RS01125 PF00366 Ribosomal protein S17 KW556_RS01130 PF00238 Ribosomal protein L14p/L23e KW556_RS01135 PF00467 KOW motif KW556_RS01135 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KW556_RS01140 PF00673 ribosomal L5P family C-terminus KW556_RS01140 PF00281 Ribosomal protein L5 KW556_RS01145 PF00253 Ribosomal protein S14p/S29e KW556_RS01150 PF00410 Ribosomal protein S8 KW556_RS01155 PF00347 Ribosomal protein L6 KW556_RS01160 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KW556_RS01165 PF00333 Ribosomal protein S5, N-terminal domain KW556_RS01165 PF03719 Ribosomal protein S5, C-terminal domain KW556_RS01170 PF00327 Ribosomal protein L30p/L7e KW556_RS01175 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KW556_RS01180 PF00344 SecY translocase KW556_RS01185 PF00444 Ribosomal protein L36 KW556_RS01190 PF00416 Ribosomal protein S13/S18 KW556_RS01195 PF00411 Ribosomal protein S11 KW556_RS01200 PF01479 S4 domain KW556_RS01200 PF00163 Ribosomal protein S4/S9 N-terminal domain KW556_RS01205 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KW556_RS01205 PF01000 RNA polymerase Rpb3/RpoA insert domain KW556_RS01205 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KW556_RS01210 PF01196 Ribosomal protein L17 KW556_RS01245 PF07715 TonB-dependent Receptor Plug Domain KW556_RS01245 PF00593 TonB dependent receptor KW556_RS01250 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS01250 PF17151 Periplasmic sensor domain KW556_RS01255 PF00672 HAMP domain KW556_RS01255 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS01255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS01260 PF00486 Transcriptional regulatory protein, C terminal KW556_RS01260 PF00072 Response regulator receiver domain KW556_RS01270 PF02743 Cache domain KW556_RS01270 PF00672 HAMP domain KW556_RS01270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS01280 PF03466 LysR substrate binding domain KW556_RS01280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS01285 PF17954 Quercetinase C-terminal cupin domain KW556_RS01285 PF02678 Pirin KW556_RS01290 PF07681 DoxX KW556_RS01295 PF17946 RecC C-terminal domain KW556_RS01300 PF13361 UvrD-like helicase C-terminal domain KW556_RS01300 PF12705 PD-(D/E)XK nuclease superfamily KW556_RS01300 PF00580 UvrD/REP helicase N-terminal domain KW556_RS01305 PF13538 UvrD-like helicase C-terminal domain KW556_RS01320 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS01335 PF00392 Bacterial regulatory proteins, gntR family KW556_RS01335 PF07702 UTRA domain KW556_RS01350 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS01360 PF08402 TOBE domain KW556_RS01360 PF00005 ABC transporter KW556_RS01370 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS01390 PF01053 Cys/Met metabolism PLP-dependent enzyme KW556_RS01400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KW556_RS01400 PF12793 Sugar transport-related sRNA regulator N-term KW556_RS01405 PF00141 Peroxidase KW556_RS01420 PF03280 Proteobacterial lipase chaperone protein KW556_RS01425 PF00561 alpha/beta hydrolase fold KW556_RS01430 PF01479 S4 domain KW556_RS01430 PF00579 tRNA synthetases class I (W and Y) KW556_RS01435 PF00196 Bacterial regulatory proteins, luxR family KW556_RS01455 PF00199 Catalase KW556_RS01455 PF06628 Catalase-related immune-responsive KW556_RS01480 PF00133 tRNA synthetases class I (I, L, M and V) KW556_RS01480 PF10458 Valyl tRNA synthetase tRNA binding arm KW556_RS01480 PF08264 Anticodon-binding domain of tRNA KW556_RS01485 PF04364 DNA polymerase III chi subunit, HolC KW556_RS01490 PF00883 Cytosol aminopeptidase family, catalytic domain KW556_RS01490 PF02789 Cytosol aminopeptidase family, N-terminal domain KW556_RS01495 PF03739 Lipopolysaccharide export system permease LptF/LptG KW556_RS01500 PF03739 Lipopolysaccharide export system permease LptF/LptG KW556_RS01560 PF13356 Arm DNA-binding domain KW556_RS01560 PF00589 Phage integrase family KW556_RS01575 PF10548 P22AR C-terminal domain KW556_RS01575 PF08346 AntA/AntB antirepressor KW556_RS01600 PF18818 Metallopeptidase superfamily domain KW556_RS01600 PF08401 Domain of unknown function (DUF1738) KW556_RS01600 PF13362 Toprim domain KW556_RS01630 PF07715 TonB-dependent Receptor Plug Domain KW556_RS01630 PF00593 TonB dependent receptor KW556_RS01640 PF00768 D-alanyl-D-alanine carboxypeptidase KW556_RS01645 PF13520 Amino acid permease KW556_RS01665 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KW556_RS01680 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase KW556_RS01685 PF02602 Uroporphyrinogen-III synthase HemD KW556_RS01690 PF03900 Porphobilinogen deaminase, C-terminal domain KW556_RS01690 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KW556_RS01695 PF12633 Adenylate cyclase NT domain KW556_RS01695 PF01295 Adenylate cyclase, class-I KW556_RS01700 PF02230 Phospholipase/Carboxylesterase KW556_RS01705 PF01491 Frataxin-like domain KW556_RS01715 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KW556_RS01715 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KW556_RS01720 PF01678 Diaminopimelate epimerase KW556_RS01730 PF02899 Phage integrase, N-terminal SAM-like domain KW556_RS01730 PF00589 Phage integrase family KW556_RS01735 PF13419 Haloacid dehalogenase-like hydrolase KW556_RS01745 PF00027 Cyclic nucleotide-binding domain KW556_RS01745 PF13545 Crp-like helix-turn-helix domain KW556_RS01755 PF07722 Peptidase C26 KW556_RS01760 PF04751 Protein of unknown function (DUF615) KW556_RS01765 PF01523 Putative modulator of DNA gyrase KW556_RS01770 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KW556_RS01775 PF01722 BolA-like protein KW556_RS01785 PF05494 MlaC protein KW556_RS01790 PF02470 MlaD protein KW556_RS01795 PF02405 Permease MlaE KW556_RS01800 PF00005 ABC transporter KW556_RS01805 PF00571 CBS domain KW556_RS01805 PF01380 SIS domain KW556_RS01815 PF06835 Lipopolysaccharide-assembly, LptC-related KW556_RS01820 PF03968 OstA-like protein KW556_RS01825 PF00005 ABC transporter KW556_RS01825 PF12399 Branched-chain amino acid ATP-binding cassette transporter KW556_RS01830 PF00309 Sigma-54 factor, Activator interacting domain (AID) KW556_RS01830 PF04963 Sigma-54 factor, core binding domain KW556_RS01830 PF04552 Sigma-54, DNA binding domain KW556_RS01835 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KW556_RS01840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KW556_RS01845 PF03668 P-loop ATPase protein family KW556_RS01850 PF00381 PTS HPr component phosphorylation site KW556_RS01855 PF00874 PRD domain KW556_RS01855 PF08279 HTH domain KW556_RS01855 PF05043 Mga helix-turn-helix domain KW556_RS01855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KW556_RS01860 PF07071 KDGP aldolase KW556_RS01865 PF03841 L-seryl-tRNA selenium transferase KW556_RS01870 PF01979 Amidohydrolase family KW556_RS01900 PF13180 PDZ domain KW556_RS01905 PF00595 PDZ domain KW556_RS01905 PF13180 PDZ domain KW556_RS01915 PF03969 AFG1-like ATPase KW556_RS01920 PF00572 Ribosomal protein L13 KW556_RS01925 PF00380 Ribosomal protein S9/S16 KW556_RS01930 PF00355 Rieske [2Fe-2S] domain KW556_RS01930 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal KW556_RS01935 PF00032 Cytochrome b(C-terminal)/b6/petD KW556_RS01935 PF00033 Cytochrome b/b6/petB KW556_RS01940 PF02167 Cytochrome C1 family KW556_RS01945 PF00043 Glutathione S-transferase, C-terminal domain KW556_RS01945 PF02798 Glutathione S-transferase, N-terminal domain KW556_RS01950 PF04386 Stringent starvation protein B KW556_RS01955 PF04972 BON domain KW556_RS01960 PF13580 SIS domain KW556_RS01965 PF02021 Uncharacterised protein family UPF0102 KW556_RS01970 PF04348 LppC putative lipoprotein KW556_RS01975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KW556_RS01990 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KW556_RS01995 PF00813 FliP family KW556_RS02000 PF01313 Bacterial export proteins, family 3 KW556_RS02005 PF01311 Bacterial export proteins, family 1 KW556_RS02010 PF01312 FlhB HrpN YscU SpaS Family KW556_RS02015 PF00771 FHIPEP family KW556_RS02020 PF00072 Response regulator receiver domain KW556_RS02020 PF00158 Sigma-54 interaction domain KW556_RS02020 PF02954 Bacterial regulatory protein, Fis family KW556_RS02025 PF02049 Flagellar hook-basal body complex protein FliE KW556_RS02030 PF01514 Secretory protein of YscJ/FliF family KW556_RS02030 PF08345 Flagellar M-ring protein C-terminal KW556_RS02035 PF01706 FliG C-terminal domain KW556_RS02035 PF14841 FliG middle domain KW556_RS02035 PF14842 FliG N-terminal domain KW556_RS02045 PF18269 T3SS EscN ATPase C-terminal domain KW556_RS02045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KW556_RS02070 PF00460 Flagella basal body rod protein KW556_RS02075 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KW556_RS02075 PF00460 Flagella basal body rod protein KW556_RS02080 PF03963 Flagellar hook capping protein - N-terminal region KW556_RS02080 PF13860 FlgD Ig-like domain KW556_RS02080 PF13861 FlgD Tudor-like domain KW556_RS02085 PF07559 Flagellar basal body protein FlaE KW556_RS02085 PF00460 Flagella basal body rod protein KW556_RS02085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KW556_RS02090 PF00460 Flagella basal body rod protein KW556_RS02090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KW556_RS02095 PF00460 Flagella basal body rod protein KW556_RS02095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KW556_RS02100 PF02107 Flagellar L-ring protein KW556_RS02105 PF02119 Flagellar P-ring protein KW556_RS02115 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KW556_RS02115 PF00460 Flagella basal body rod protein KW556_RS02120 PF00669 Bacterial flagellin N-terminal helical region KW556_RS02135 PF00700 Bacterial flagellin C-terminal helical region KW556_RS02135 PF00669 Bacterial flagellin N-terminal helical region KW556_RS02140 PF07196 Flagellin hook IN motif KW556_RS02140 PF07195 Flagellar hook-associated protein 2 C-terminus KW556_RS02140 PF02465 Flagellar hook-associated protein 2 N-terminus KW556_RS02145 PF02561 Flagellar protein FliS KW556_RS02165 PF04542 Sigma-70 region 2 KW556_RS02165 PF04545 Sigma-70, region 4 KW556_RS02170 PF01618 MotA/TolQ/ExbB proton channel family KW556_RS02175 PF00691 OmpA family KW556_RS02175 PF13677 Membrane MotB of proton-channel complex MotA/MotB KW556_RS02185 PF01476 LysM domain KW556_RS02185 PF01464 Transglycosylase SLT domain KW556_RS02190 PF02381 MraZ protein, putative antitoxin-like KW556_RS02195 PF01795 MraW methylase family KW556_RS02200 PF04999 Cell division protein FtsL KW556_RS02205 PF03717 Penicillin-binding Protein dimerisation domain KW556_RS02205 PF00905 Penicillin binding protein transpeptidase domain KW556_RS02210 PF01225 Mur ligase family, catalytic domain KW556_RS02210 PF02875 Mur ligase family, glutamate ligase domain KW556_RS02210 PF08245 Mur ligase middle domain KW556_RS02215 PF02875 Mur ligase family, glutamate ligase domain KW556_RS02215 PF01225 Mur ligase family, catalytic domain KW556_RS02215 PF08245 Mur ligase middle domain KW556_RS02220 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KW556_RS02220 PF00953 Glycosyl transferase family 4 KW556_RS02225 PF08245 Mur ligase middle domain KW556_RS02225 PF02875 Mur ligase family, glutamate ligase domain KW556_RS02230 PF01098 Cell cycle protein KW556_RS02235 PF03033 Glycosyltransferase family 28 N-terminal domain KW556_RS02235 PF04101 Glycosyltransferase family 28 C-terminal domain KW556_RS02240 PF01225 Mur ligase family, catalytic domain KW556_RS02240 PF02875 Mur ligase family, glutamate ligase domain KW556_RS02240 PF08245 Mur ligase middle domain KW556_RS02245 PF03799 Cell division protein FtsQ KW556_RS02245 PF08478 POTRA domain, FtsQ-type KW556_RS02250 PF02491 SHS2 domain inserted in FTSA KW556_RS02255 PF12327 FtsZ family, C-terminal domain KW556_RS02255 PF00091 Tubulin/FtsZ family, GTPase domain KW556_RS02260 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KW556_RS02270 PF07516 SecA Wing and Scaffold domain KW556_RS02270 PF01043 SecA preprotein cross-linking domain KW556_RS02270 PF07517 SecA DEAD-like domain KW556_RS02270 PF02810 SEC-C motif KW556_RS02275 PF00293 NUDIX domain KW556_RS02280 PF03884 DNA gyrase inhibitor YacG KW556_RS02285 PF07072 Cell division protein KW556_RS02290 PF01121 Dephospho-CoA kinase KW556_RS02295 PF06750 Bacterial Peptidase A24 N-terminal domain KW556_RS02295 PF01478 Type IV leader peptidase family KW556_RS02300 PF00482 Type II secretion system (T2SS), protein F KW556_RS02305 PF00437 Type II/IV secretion system protein KW556_RS02305 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KW556_RS02315 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KW556_RS02315 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KW556_RS02325 PF01510 N-acetylmuramoyl-L-alanine amidase KW556_RS02330 PF00392 Bacterial regulatory proteins, gntR family KW556_RS02330 PF07729 FCD domain KW556_RS02335 PF00456 Transketolase, thiamine diphosphate binding domain KW556_RS02335 PF17831 Pyruvate dehydrogenase E1 component middle domain KW556_RS02340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KW556_RS02340 PF02817 e3 binding domain KW556_RS02340 PF00364 Biotin-requiring enzyme KW556_RS02345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KW556_RS02345 PF07992 Pyridine nucleotide-disulphide oxidoreductase KW556_RS02350 PF00563 EAL domain KW556_RS02350 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS02350 PF03707 Bacterial signalling protein N terminal repeat KW556_RS02355 PF00672 HAMP domain KW556_RS02355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS02355 PF12729 Four helix bundle sensory module for signal transduction KW556_RS02360 PF01734 Patatin-like phospholipase KW556_RS02365 PF00330 Aconitase family (aconitate hydratase) KW556_RS02365 PF06434 Aconitate hydratase 2 N-terminus KW556_RS02365 PF11791 Aconitate B N-terminal domain KW556_RS02370 PF12792 CSS motif domain associated with EAL KW556_RS02370 PF00563 EAL domain KW556_RS02380 PF02492 CobW/HypB/UreG, nucleotide-binding domain KW556_RS02380 PF07683 Cobalamin synthesis protein cobW C-terminal domain KW556_RS02385 PF00873 AcrB/AcrD/AcrF family KW556_RS02400 PF07690 Major Facilitator Superfamily KW556_RS02410 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KW556_RS02415 PF02152 Dihydroneopterin aldolase KW556_RS02420 PF02660 Glycerol-3-phosphate acyltransferase KW556_RS02480 PF05154 TM2 domain KW556_RS02510 PF02384 N-6 DNA Methylase KW556_RS02530 PF07670 Nucleoside recognition KW556_RS02555 PF00206 Lyase KW556_RS02555 PF14698 Argininosuccinate lyase C-terminal KW556_RS02560 PF00764 Arginosuccinate synthase KW556_RS02565 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KW556_RS02565 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KW556_RS02570 PF00696 Amino acid kinase family KW556_RS02575 PF01118 Semialdehyde dehydrogenase, NAD binding domain KW556_RS02575 PF02774 Semialdehyde dehydrogenase, dimerisation domain KW556_RS02580 PF07687 Peptidase dimerisation domain KW556_RS02580 PF01546 Peptidase family M20/M25/M40 KW556_RS02585 PF00311 Phosphoenolpyruvate carboxylase KW556_RS02590 PF01609 Transposase DDE domain KW556_RS02605 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS02605 PF17151 Periplasmic sensor domain KW556_RS02615 PF06055 Exopolysaccharide synthesis, ExoD KW556_RS02625 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS02630 PF00909 Ammonium Transporter Family KW556_RS02635 PF05433 Glycine zipper 2TM domain KW556_RS02640 PF00583 Acetyltransferase (GNAT) family KW556_RS02645 PF11756 Nitrous oxide-stimulated promoter KW556_RS02650 PF00557 Metallopeptidase family M24 KW556_RS02650 PF01321 Creatinase/Prolidase N-terminal domain KW556_RS02655 PF00392 Bacterial regulatory proteins, gntR family KW556_RS02660 PF01293 Phosphoenolpyruvate carboxykinase KW556_RS02665 PF01430 Hsp33 protein KW556_RS02670 PF01479 S4 domain KW556_RS02680 PF00293 NUDIX domain KW556_RS02685 PF01594 AI-2E family transporter KW556_RS02695 PF00158 Sigma-54 interaction domain KW556_RS02695 PF02954 Bacterial regulatory protein, Fis family KW556_RS02695 PF00989 PAS fold KW556_RS02700 PF00465 Iron-containing alcohol dehydrogenase KW556_RS02705 PF03610 PTS system fructose IIA component KW556_RS02705 PF05524 PEP-utilising enzyme, N-terminal KW556_RS02705 PF00381 PTS HPr component phosphorylation site KW556_RS02705 PF00391 PEP-utilising enzyme, mobile domain KW556_RS02710 PF02734 DAK2 domain KW556_RS02715 PF02733 Dak1 domain KW556_RS02720 PF00860 Permease family KW556_RS02725 PF00313 'Cold-shock' DNA-binding domain KW556_RS02740 PF01545 Cation efflux family KW556_RS02740 PF16916 Dimerisation domain of Zinc Transporter KW556_RS02755 PF00436 Single-strand binding protein family KW556_RS02760 PF00005 ABC transporter KW556_RS02760 PF17760 UvrA interaction domain KW556_RS02760 PF17755 UvrA DNA-binding domain KW556_RS02765 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS02770 PF03922 OmpW family KW556_RS02775 PF00672 HAMP domain KW556_RS02775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS02790 PF02219 Methylenetetrahydrofolate reductase KW556_RS02800 PF03594 Benzoate membrane transport protein KW556_RS02805 PF07883 Cupin domain KW556_RS02805 PF01381 Helix-turn-helix KW556_RS02880 PF14659 Phage integrase, N-terminal SAM-like domain KW556_RS02880 PF00589 Phage integrase family KW556_RS02885 PF13356 Arm DNA-binding domain KW556_RS02885 PF00589 Phage integrase family KW556_RS02910 PF02397 Bacterial sugar transferase KW556_RS02930 PF13807 G-rich domain on putative tyrosine kinase KW556_RS02930 PF13614 AAA domain KW556_RS02930 PF02706 Chain length determinant protein KW556_RS02935 PF09721 Transmembrane exosortase (Exosortase_EpsH) KW556_RS02950 PF13439 Glycosyltransferase Family 4 KW556_RS02950 PF00534 Glycosyl transferases group 1 KW556_RS02955 PF00150 Cellulase (glycosyl hydrolase family 5) KW556_RS02975 PF01501 Glycosyl transferase family 8 KW556_RS02985 PF01050 Mannose-6-phosphate isomerase KW556_RS02985 PF00483 Nucleotidyl transferase KW556_RS02990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KW556_RS02990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KW556_RS02990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KW556_RS02990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KW556_RS02995 PF01609 Transposase DDE domain KW556_RS02995 PF05598 Transposase domain (DUF772) KW556_RS03000 PF13808 DDE_Tnp_1-associated KW556_RS03000 PF01609 Transposase DDE domain KW556_RS03005 PF00816 H-NS histone family KW556_RS03015 PF13148 Protein of unknown function (DUF3987) KW556_RS03035 PF09588 YqaJ-like viral recombinase domain KW556_RS03065 PF04002 RadC-like JAB domain KW556_RS03110 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A KW556_RS03115 PF12161 HsdM N-terminal domain KW556_RS03115 PF02384 N-6 DNA Methylase KW556_RS03120 PF01420 Type I restriction modification DNA specificity domain KW556_RS03130 PF12008 Type I restriction and modification enzyme - subunit R C terminal KW556_RS03130 PF18766 SWI2/SNF2 ATPase KW556_RS03130 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KW556_RS03135 PF03695 Uncharacterised protein family (UPF0149) KW556_RS03135 PF02810 SEC-C motif KW556_RS03145 PF06965 Na+/H+ antiporter 1 KW556_RS03145 PF13462 Thioredoxin KW556_RS03160 PF00202 Aminotransferase class-III KW556_RS03165 PF00654 Voltage gated chloride channel KW556_RS03175 PF01521 Iron-sulphur cluster biosynthesis KW556_RS03180 PF03553 Na+/H+ antiporter family KW556_RS03220 PF00534 Glycosyl transferases group 1 KW556_RS03220 PF08323 Starch synthase catalytic domain KW556_RS03225 PF00483 Nucleotidyl transferase KW556_RS03230 PF05175 Methyltransferase small domain KW556_RS03230 PF08468 Methyltransferase small domain N-terminal KW556_RS03235 PF00701 Dihydrodipicolinate synthetase family KW556_RS03245 PF01865 Protein of unknown function DUF47 KW556_RS03250 PF01384 Phosphate transporter family KW556_RS03255 PF00696 Amino acid kinase family KW556_RS03255 PF00742 Homoserine dehydrogenase KW556_RS03255 PF03447 Homoserine dehydrogenase, NAD binding domain KW556_RS03260 PF01053 Cys/Met metabolism PLP-dependent enzyme KW556_RS03265 PF01340 Met Apo-repressor, MetJ KW556_RS03270 PF02311 AraC-like ligand binding domain KW556_RS03270 PF12833 Helix-turn-helix domain KW556_RS03275 PF01588 Putative tRNA binding domain KW556_RS03280 PF03222 Tryptophan/tyrosine permease family KW556_RS03290 PF00459 Inositol monophosphatase family KW556_RS03295 PF00293 NUDIX domain KW556_RS03300 PF13419 Haloacid dehalogenase-like hydrolase KW556_RS03315 PF14602 Hexapeptide repeat of succinyl-transferase KW556_RS03315 PF12464 Maltose acetyltransferase KW556_RS03320 PF13194 Domain of unknown function (DUF4010) KW556_RS03325 PF18416 N-acetylglucosamine binding protein domain 2 KW556_RS03325 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KW556_RS03330 PF00672 HAMP domain KW556_RS03330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS03330 PF17200 Single Cache domain 2 KW556_RS03340 PF02350 UDP-N-acetylglucosamine 2-epimerase KW556_RS03360 PF13283 Bacteriophage N adsorption protein A C-term KW556_RS03365 PF14488 Domain of unknown function (DUF4434) KW556_RS03375 PF01522 Polysaccharide deacetylase KW556_RS03375 PF14883 Hypothetical glycosyl hydrolase family 13 KW556_RS03380 PF00535 Glycosyl transferase family 2 KW556_RS03420 PF11230 Protein of unknown function (DUF3029) KW556_RS03425 PF04055 Radical SAM superfamily KW556_RS03435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS03435 PF03466 LysR substrate binding domain KW556_RS03440 PF00155 Aminotransferase class I and II KW556_RS03445 PF02583 Metal-sensitive transcriptional repressor KW556_RS03455 PF04012 PspA/IM30 family KW556_RS03470 PF01541 GIY-YIG catalytic domain KW556_RS03480 PF00892 EamA-like transporter family KW556_RS03485 PF03167 Uracil DNA glycosylase superfamily KW556_RS03490 PF00892 EamA-like transporter family KW556_RS03495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS03495 PF03466 LysR substrate binding domain KW556_RS03500 PF00950 ABC 3 transport family KW556_RS03505 PF00005 ABC transporter KW556_RS03510 PF01297 Zinc-uptake complex component A periplasmic KW556_RS03530 PF01551 Peptidase family M23 KW556_RS03530 PF08525 Opacity-associated protein A N-terminal motif KW556_RS03530 PF01476 LysM domain KW556_RS03535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KW556_RS03540 PF04222 Protein of unknown function (DUF416) KW556_RS03555 PF02028 BCCT, betaine/carnitine/choline family transporter KW556_RS03560 PF01966 HD domain KW556_RS03560 PF01743 Poly A polymerase head domain KW556_RS03560 PF12627 Probable RNA and SrmB- binding site of polymerase A KW556_RS03565 PF10576 Iron-sulfur binding domain of endonuclease III KW556_RS03565 PF00633 Helix-hairpin-helix motif KW556_RS03565 PF14815 NUDIX domain KW556_RS03565 PF00730 HhH-GPD superfamily base excision DNA repair protein KW556_RS03570 PF04362 Bacterial Fe(2+) trafficking KW556_RS03575 PF01464 Transglycosylase SLT domain KW556_RS03575 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain KW556_RS03580 PF04076 Bacterial OB fold (BOF) protein KW556_RS03585 PF00657 GDSL-like Lipase/Acylhydrolase KW556_RS03590 PF00691 OmpA family KW556_RS03590 PF01389 OmpA-like transmembrane domain KW556_RS03595 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS03600 PF08461 Ribonuclease R winged-helix domain KW556_RS03600 PF00575 S1 RNA binding domain KW556_RS03600 PF00773 RNB domain KW556_RS03600 PF08206 Ribonuclease B OB domain KW556_RS03600 PF17876 Cold shock domain KW556_RS03605 PF00588 SpoU rRNA Methylase family KW556_RS03605 PF08032 RNA 2'-O ribose methyltransferase substrate binding KW556_RS03615 PF13673 Acetyltransferase (GNAT) domain KW556_RS03620 PF00270 DEAD/DEAH box helicase KW556_RS03620 PF00271 Helicase conserved C-terminal domain KW556_RS03625 PF05175 Methyltransferase small domain KW556_RS03630 PF05525 Branched-chain amino acid transport protein KW556_RS03635 PF05525 Branched-chain amino acid transport protein KW556_RS03650 PF01475 Ferric uptake regulator family KW556_RS03655 PF01207 Dihydrouridine synthase (Dus) KW556_RS03660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS03660 PF08447 PAS fold KW556_RS03670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KW556_RS03680 PF00132 Bacterial transferase hexapeptide (six repeats) KW556_RS03685 PF10952 Protein of unknown function (DUF2753) KW556_RS03690 PF00378 Enoyl-CoA hydratase/isomerase KW556_RS03705 PF00106 short chain dehydrogenase KW556_RS03710 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KW556_RS03710 PF04073 Aminoacyl-tRNA editing domain KW556_RS03710 PF03129 Anticodon binding domain KW556_RS03715 PF01938 TRAM domain KW556_RS03715 PF05958 tRNA (Uracil-5-)-methyltransferase KW556_RS03720 PF13006 Insertion element 4 transposase N-terminal KW556_RS03720 PF01609 Transposase DDE domain KW556_RS03730 PF02470 MlaD protein KW556_RS03735 PF04403 Paraquat-inducible protein A KW556_RS03740 PF17209 Hfq protein KW556_RS03745 PF13419 Haloacid dehalogenase-like hydrolase KW556_RS03755 PF00360 Phytochrome region KW556_RS03755 PF01590 GAF domain KW556_RS03755 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS03755 PF00563 EAL domain KW556_RS03760 PF00773 RNB domain KW556_RS03760 PF08206 Ribonuclease B OB domain KW556_RS03760 PF17876 Cold shock domain KW556_RS03765 PF03466 LysR substrate binding domain KW556_RS03765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS03770 PF00765 Autoinducer synthase KW556_RS03775 PF03472 Autoinducer binding domain KW556_RS03775 PF00196 Bacterial regulatory proteins, luxR family KW556_RS03780 PF01810 LysE type translocator KW556_RS03785 PF00672 HAMP domain KW556_RS03785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS03790 PF07499 RuvA, C-terminal domain KW556_RS03790 PF01330 RuvA N terminal domain KW556_RS03795 PF05496 Holliday junction DNA helicase RuvB P-loop domain KW556_RS03795 PF05491 RuvB C-terminal winged helix domain KW556_RS03795 PF17864 RuvB AAA lid domain KW556_RS03800 PF01654 Cytochrome bd terminal oxidase subunit I KW556_RS03805 PF02322 Cytochrome bd terminal oxidase subunit II KW556_RS03810 PF08173 Membrane bound YbgT-like protein KW556_RS03815 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) KW556_RS03820 PF03061 Thioesterase superfamily KW556_RS03825 PF01618 MotA/TolQ/ExbB proton channel family KW556_RS03830 PF02472 Biopolymer transport protein ExbD/TolR KW556_RS03840 PF04052 TolB amino-terminal domain KW556_RS03840 PF07676 WD40-like Beta Propeller Repeat KW556_RS03845 PF00691 OmpA family KW556_RS03850 PF16331 TolA binding protein trimerisation KW556_RS03850 PF13174 Tetratricopeptide repeat KW556_RS03920 PF00209 Sodium:neurotransmitter symporter family KW556_RS03930 PF00209 Sodium:neurotransmitter symporter family KW556_RS03950 PF07690 Major Facilitator Superfamily KW556_RS03960 PF01037 Lrp/AsnC ligand binding domain KW556_RS03975 PF13344 Haloacid dehalogenase-like hydrolase KW556_RS03975 PF00293 NUDIX domain KW556_RS03985 PF01641 SelR domain KW556_RS03990 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KW556_RS03990 PF00128 Alpha amylase, catalytic domain KW556_RS03995 PF00128 Alpha amylase, catalytic domain KW556_RS03995 PF02806 Alpha amylase, C-terminal all-beta domain KW556_RS03995 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KW556_RS04000 PF02446 4-alpha-glucanotransferase KW556_RS04005 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KW556_RS04005 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KW556_RS04010 PF01263 Aldose 1-epimerase KW556_RS04015 PF02445 Quinolinate synthetase A protein KW556_RS04020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS04020 PF00672 HAMP domain KW556_RS04025 PF01957 NfeD-like C-terminal, partner-binding KW556_RS04030 PF16200 C-terminal region of band_7 KW556_RS04030 PF01145 SPFH domain / Band 7 family KW556_RS04035 PF14824 Sirohaem biosynthesis protein central KW556_RS04035 PF10414 Sirohaem synthase dimerisation region KW556_RS04035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KW556_RS04040 PF01507 Phosphoadenosine phosphosulfate reductase family KW556_RS04045 PF00009 Elongation factor Tu GTP binding domain KW556_RS04050 PF02080 TrkA-C domain KW556_RS04050 PF03600 Citrate transporter KW556_RS04065 PF04607 Region found in RelA / SpoT proteins KW556_RS04070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS04070 PF08447 PAS fold KW556_RS04090 PF00005 ABC transporter KW556_RS04105 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) KW556_RS04120 PF00719 Inorganic pyrophosphatase KW556_RS04125 PF11849 Domain of unknown function (DUF3369) KW556_RS04135 PF00893 Small Multidrug Resistance protein KW556_RS04140 PF00893 Small Multidrug Resistance protein KW556_RS04145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KW556_RS04150 PF00905 Penicillin binding protein transpeptidase domain KW556_RS04150 PF14814 Bifunctional transglycosylase second domain KW556_RS04150 PF00912 Transglycosylase KW556_RS04155 PF00271 Helicase conserved C-terminal domain KW556_RS04155 PF04408 Helicase associated domain (HA2) KW556_RS04155 PF00270 DEAD/DEAH box helicase KW556_RS04155 PF08482 ATP-dependent helicase C-terminal KW556_RS04165 PF17746 SfsA N-terminal OB domain KW556_RS04165 PF03749 Sugar fermentation stimulation protein RE domain KW556_RS04170 PF01258 Prokaryotic dksA/traR C4-type zinc finger KW556_RS04175 PF00749 tRNA synthetases class I (E and Q), catalytic domain KW556_RS04180 PF12626 Polymerase A arginine-rich C-terminus KW556_RS04180 PF12627 Probable RNA and SrmB- binding site of polymerase A KW556_RS04180 PF01743 Poly A polymerase head domain KW556_RS04185 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KW556_RS04190 PF02548 Ketopantoate hydroxymethyltransferase KW556_RS04195 PF02569 Pantoate-beta-alanine ligase KW556_RS04205 PF00375 Sodium:dicarboxylate symporter family KW556_RS04225 PF01869 BadF/BadG/BcrA/BcrD ATPase family KW556_RS04230 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component KW556_RS04235 PF01061 ABC-2 type transporter KW556_RS04240 PF00005 ABC transporter KW556_RS04245 PF00156 Phosphoribosyl transferase domain KW556_RS04250 PF00440 Bacterial regulatory proteins, tetR family KW556_RS04255 PF02441 Flavoprotein KW556_RS04260 PF01225 Mur ligase family, catalytic domain KW556_RS04260 PF02875 Mur ligase family, glutamate ligase domain KW556_RS04260 PF08245 Mur ligase middle domain KW556_RS04265 PF01569 PAP2 superfamily KW556_RS04270 PF01370 NAD dependent epimerase/dehydratase family KW556_RS04275 PF00970 Oxidoreductase FAD-binding domain KW556_RS04275 PF00175 Oxidoreductase NAD-binding domain KW556_RS04275 PF00042 Globin KW556_RS04280 PF03063 Prismane/CO dehydrogenase family KW556_RS04285 PF00210 Ferritin-like domain KW556_RS04290 PF01510 N-acetylmuramoyl-L-alanine amidase KW556_RS04295 PF07308 Protein of unknown function (DUF1456) KW556_RS04300 PF00072 Response regulator receiver domain KW556_RS04300 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KW556_RS04300 PF00672 HAMP domain KW556_RS04300 PF01627 Hpt domain KW556_RS04300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS04300 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS04305 PF05958 tRNA (Uracil-5-)-methyltransferase KW556_RS04305 PF01938 TRAM domain KW556_RS04310 PF13291 ACT domain KW556_RS04310 PF04607 Region found in RelA / SpoT proteins KW556_RS04310 PF02824 TGS domain KW556_RS04315 PF03819 MazG nucleotide pyrophosphohydrolase domain KW556_RS04320 PF06418 CTP synthase N-terminus KW556_RS04320 PF00117 Glutamine amidotransferase class-I KW556_RS04325 PF03952 Enolase, N-terminal domain KW556_RS04325 PF00113 Enolase, C-terminal TIM barrel domain KW556_RS04390 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KW556_RS04400 PF00005 ABC transporter KW556_RS04400 PF12848 ABC transporter KW556_RS04405 PF01368 DHH family KW556_RS04405 PF02272 DHHA1 domain KW556_RS04405 PF01743 Poly A polymerase head domain KW556_RS04405 PF00571 CBS domain KW556_RS04420 PF00392 Bacterial regulatory proteins, gntR family KW556_RS04420 PF00155 Aminotransferase class I and II KW556_RS04430 PF01810 LysE type translocator KW556_RS04435 PF01177 Asp/Glu/Hydantoin racemase KW556_RS04445 PF04074 YhcH/YjgK/YiaL KW556_RS04450 PF00871 Acetokinase family KW556_RS04455 PF00924 Mechanosensitive ion channel KW556_RS04460 PF17969 L,D-transpeptidase C-terminal domain KW556_RS04460 PF03734 L,D-transpeptidase catalytic domain KW556_RS04470 PF00474 Sodium:solute symporter family KW556_RS04475 PF04977 Septum formation initiator KW556_RS04480 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KW556_RS04485 PF02542 YgbB family KW556_RS04490 PF01142 tRNA pseudouridine synthase D (TruD) KW556_RS04495 PF01975 Survival protein SurE KW556_RS04505 PF09335 SNARE associated Golgi protein KW556_RS04510 PF01476 LysM domain KW556_RS04510 PF01551 Peptidase family M23 KW556_RS04515 PF00140 Sigma-70 factor, region 1.2 KW556_RS04515 PF04542 Sigma-70 region 2 KW556_RS04515 PF04539 Sigma-70 region 3 KW556_RS04515 PF04545 Sigma-70, region 4 KW556_RS04520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KW556_RS04530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS04530 PF03466 LysR substrate binding domain KW556_RS04535 PF04371 Porphyromonas-type peptidyl-arginine deiminase KW556_RS04540 PF01425 Amidase KW556_RS04560 PF00753 Metallo-beta-lactamase superfamily KW556_RS04570 PF00270 DEAD/DEAH box helicase KW556_RS04570 PF00271 Helicase conserved C-terminal domain KW556_RS04575 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS04585 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase KW556_RS04595 PF00445 Ribonuclease T2 family KW556_RS04600 PF03060 Nitronate monooxygenase KW556_RS04630 PF00293 NUDIX domain KW556_RS04630 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain KW556_RS04630 PF09297 NADH pyrophosphatase zinc ribbon domain KW556_RS04640 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS04640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS04640 PF00672 HAMP domain KW556_RS04645 PF00072 Response regulator receiver domain KW556_RS04645 PF00486 Transcriptional regulatory protein, C terminal KW556_RS04665 PF08335 GlnD PII-uridylyltransferase KW556_RS04665 PF03710 Glutamate-ammonia ligase adenylyltransferase KW556_RS04670 PF00860 Permease family KW556_RS04680 PF00005 ABC transporter KW556_RS04680 PF12848 ABC transporter KW556_RS04695 PF01464 Transglycosylase SLT domain KW556_RS04710 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) KW556_RS04715 PF01370 NAD dependent epimerase/dehydratase family KW556_RS04720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KW556_RS04720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KW556_RS04720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KW556_RS04730 PF00005 ABC transporter KW556_RS04730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KW556_RS04735 PF00005 ABC transporter KW556_RS04735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KW556_RS04745 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS04745 PF12911 N-terminal TM domain of oligopeptide transport permease C KW556_RS04750 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS04755 PF17969 L,D-transpeptidase C-terminal domain KW556_RS04755 PF03734 L,D-transpeptidase catalytic domain KW556_RS04760 PF01343 Peptidase family S49 KW556_RS04765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KW556_RS04765 PF07992 Pyridine nucleotide-disulphide oxidoreductase KW556_RS04770 PF00881 Nitroreductase family KW556_RS04775 PF14602 Hexapeptide repeat of succinyl-transferase KW556_RS04775 PF12464 Maltose acetyltransferase KW556_RS04785 PF08240 Alcohol dehydrogenase GroES-like domain KW556_RS04785 PF00107 Zinc-binding dehydrogenase KW556_RS04790 PF03466 LysR substrate binding domain KW556_RS04790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS04795 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KW556_RS04795 PF00367 phosphotransferase system, EIIB KW556_RS04795 PF02378 Phosphotransferase system, EIIC KW556_RS04800 PF00474 Sodium:solute symporter family KW556_RS04805 PF06196 Protein of unknown function (DUF997) KW556_RS04810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KW556_RS04810 PF00289 Biotin carboxylase, N-terminal domain KW556_RS04810 PF02785 Biotin carboxylase C-terminal domain KW556_RS04815 PF00364 Biotin-requiring enzyme KW556_RS04820 PF01220 Dehydroquinase class II KW556_RS04825 PF13193 AMP-binding enzyme C-terminal domain KW556_RS04825 PF00501 AMP-binding enzyme KW556_RS04825 PF16177 Acetyl-coenzyme A synthetase N-terminus KW556_RS04835 PF03707 Bacterial signalling protein N terminal repeat KW556_RS04835 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS04835 PF00563 EAL domain KW556_RS04845 PF02613 Nitrate reductase delta subunit KW556_RS04850 PF01568 Molydopterin dinucleotide binding domain KW556_RS04850 PF18364 Molybdopterin oxidoreductase N-terminal domain KW556_RS04850 PF00384 Molybdopterin oxidoreductase KW556_RS04855 PF03264 NapC/NirT cytochrome c family, N-terminal region KW556_RS04860 PF00072 Response regulator receiver domain KW556_RS04860 PF00486 Transcriptional regulatory protein, C terminal KW556_RS04870 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KW556_RS04875 PF00672 HAMP domain KW556_RS04875 PF00072 Response regulator receiver domain KW556_RS04875 PF01627 Hpt domain KW556_RS04875 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS04875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS04885 PF00464 Serine hydroxymethyltransferase KW556_RS04890 PF03477 ATP cone domain KW556_RS04895 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KW556_RS04895 PF01872 RibD C-terminal domain KW556_RS04900 PF00677 Lumazine binding domain KW556_RS04905 PF00925 GTP cyclohydrolase II KW556_RS04905 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KW556_RS04910 PF00885 6,7-dimethyl-8-ribityllumazine synthase KW556_RS04915 PF01029 NusB family KW556_RS04920 PF00586 AIR synthase related protein, N-terminal domain KW556_RS04920 PF02769 AIR synthase related protein, C-terminal domain KW556_RS04925 PF04608 Phosphatidylglycerophosphatase A KW556_RS04930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KW556_RS04930 PF00005 ABC transporter KW556_RS04935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KW556_RS04940 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS04945 PF12911 N-terminal TM domain of oligopeptide transport permease C KW556_RS04945 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS04950 PF02780 Transketolase, C-terminal domain KW556_RS04950 PF02779 Transketolase, pyrimidine binding domain KW556_RS04950 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KW556_RS04955 PF00348 Polyprenyl synthetase KW556_RS04960 PF02609 Exonuclease VII small subunit KW556_RS04965 PF01618 MotA/TolQ/ExbB proton channel family KW556_RS04970 PF00691 OmpA family KW556_RS04970 PF13677 Membrane MotB of proton-channel complex MotA/MotB KW556_RS04975 PF03449 Transcription elongation factor, N-terminal KW556_RS04975 PF01272 Transcription elongation factor, GreA/GreB, C-term KW556_RS04985 PF01985 CRS1 / YhbY (CRM) domain KW556_RS04990 PF01728 FtsJ-like methyltransferase KW556_RS04995 PF17862 AAA+ lid domain KW556_RS04995 PF06480 FtsH Extracellular KW556_RS04995 PF01434 Peptidase family M41 KW556_RS04995 PF00004 ATPase family associated with various cellular activities (AAA) KW556_RS05000 PF00809 Pterin binding enzyme KW556_RS05005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KW556_RS05005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KW556_RS05005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KW556_RS05005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KW556_RS05010 PF00121 Triosephosphate isomerase KW556_RS05015 PF03840 Preprotein translocase SecG subunit KW556_RS05030 PF17384 RimP C-terminal SH3 domain KW556_RS05030 PF02576 RimP N-terminal domain KW556_RS05035 PF13184 NusA-like KH domain KW556_RS05035 PF08529 NusA N-terminal domain KW556_RS05035 PF00575 S1 RNA binding domain KW556_RS05040 PF00009 Elongation factor Tu GTP binding domain KW556_RS05040 PF11987 Translation-initiation factor 2 KW556_RS05040 PF08364 Bacterial translation initiation factor IF-2 associated region KW556_RS05040 PF04760 Translation initiation factor IF-2, N-terminal region KW556_RS05045 PF02033 Ribosome-binding factor A KW556_RS05050 PF01509 TruB family pseudouridylate synthase (N terminal domain) KW556_RS05050 PF16198 tRNA pseudouridylate synthase B C-terminal domain KW556_RS05050 PF09157 Pseudouridine synthase II TruB, C-terminal KW556_RS05055 PF00312 Ribosomal protein S15 KW556_RS05060 PF00575 S1 RNA binding domain KW556_RS05060 PF00013 KH domain KW556_RS05060 PF03725 3' exoribonuclease family, domain 2 KW556_RS05060 PF01138 3' exoribonuclease family, domain 1 KW556_RS05060 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KW556_RS05065 PF13443 Cro/C1-type HTH DNA-binding domain KW556_RS05075 PF00672 HAMP domain KW556_RS05075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS05075 PF01627 Hpt domain KW556_RS05075 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KW556_RS05075 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS05075 PF00072 Response regulator receiver domain KW556_RS05080 PF08329 Chitinase A, N-terminal domain KW556_RS05080 PF00704 Glycosyl hydrolases family 18 KW556_RS05085 PF08448 PAS fold KW556_RS05085 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS05090 PF00704 Glycosyl hydrolases family 18 KW556_RS05090 PF08329 Chitinase A, N-terminal domain KW556_RS05095 PF17945 Beta/Gamma crystallin KW556_RS05095 PF12561 ToxR activated gene A lipoprotein domain KW556_RS05130 PF06483 Chitinase C KW556_RS05130 PF00704 Glycosyl hydrolases family 18 KW556_RS05135 PF01584 CheW-like domain KW556_RS05135 PF00072 Response regulator receiver domain KW556_RS05140 PF13472 GDSL-like Lipase/Acylhydrolase family KW556_RS05145 PF00005 ABC transporter KW556_RS05155 PF01370 NAD dependent epimerase/dehydratase family KW556_RS05155 PF08338 Domain of unknown function (DUF1731) KW556_RS05160 PF12792 CSS motif domain associated with EAL KW556_RS05160 PF00563 EAL domain KW556_RS05165 PF00155 Aminotransferase class I and II KW556_RS05170 PF02390 Putative methyltransferase KW556_RS05175 PF04320 Protein with unknown function (DUF469) KW556_RS05180 PF04960 Glutaminase KW556_RS05185 PF00581 Rhodanese-like domain KW556_RS05190 PF06004 Bacterial protein of unknown function (DUF903) KW556_RS05200 PF00994 Probable molybdopterin binding domain KW556_RS05215 PF06738 Putative threonine/serine exporter KW556_RS05220 PF12821 Threonine/Serine exporter, ThrE KW556_RS05225 PF00186 Dihydrofolate reductase KW556_RS05230 PF01507 Phosphoadenosine phosphosulfate reductase family KW556_RS05235 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KW556_RS05235 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KW556_RS05240 PF00667 FAD binding domain KW556_RS05240 PF00258 Flavodoxin KW556_RS05240 PF00175 Oxidoreductase NAD-binding domain KW556_RS05245 PF00152 tRNA synthetases class II (D, K and N) KW556_RS05245 PF01336 OB-fold nucleic acid binding domain KW556_RS05255 PF00672 HAMP domain KW556_RS05255 PF02743 Cache domain KW556_RS05255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS05260 PF03616 Sodium/glutamate symporter KW556_RS05265 PF00710 Asparaginase, N-terminal KW556_RS05265 PF17763 Glutaminase/Asparaginase C-terminal domain KW556_RS05270 PF07023 Protein of unknown function (DUF1315) KW556_RS05275 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KW556_RS05275 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KW556_RS05290 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KW556_RS05290 PF04055 Radical SAM superfamily KW556_RS05295 PF03099 Biotin/lipoate A/B protein ligase family KW556_RS05300 PF04359 Protein of unknown function (DUF493) KW556_RS05305 PF07943 Penicillin-binding protein 5, C-terminal domain KW556_RS05305 PF00768 D-alanyl-D-alanine carboxypeptidase KW556_RS05310 PF03330 Lytic transglycolase KW556_RS05310 PF05036 Sporulation related domain KW556_RS05315 PF13406 Transglycosylase SLT domain KW556_RS05320 PF01098 Cell cycle protein KW556_RS05325 PF00905 Penicillin binding protein transpeptidase domain KW556_RS05325 PF03717 Penicillin-binding Protein dimerisation domain KW556_RS05330 PF02590 Predicted SPOUT methyltransferase KW556_RS05340 PF01467 Cytidylyltransferase-like KW556_RS05355 PF00133 tRNA synthetases class I (I, L, M and V) KW556_RS05355 PF08264 Anticodon-binding domain of tRNA KW556_RS05355 PF13603 Leucyl-tRNA synthetase, Domain 2 KW556_RS05360 PF07295 Zinc-ribbon containing domain KW556_RS05365 PF01523 Putative modulator of DNA gyrase KW556_RS05370 PF01523 Putative modulator of DNA gyrase KW556_RS05375 PF00258 Flavodoxin KW556_RS05380 PF02899 Phage integrase, N-terminal SAM-like domain KW556_RS05380 PF00589 Phage integrase family KW556_RS05385 PF01741 Large-conductance mechanosensitive channel, MscL KW556_RS05395 PF01368 DHH family KW556_RS05395 PF02272 DHHA1 domain KW556_RS05395 PF17768 RecJ OB domain KW556_RS05400 PF13411 MerR HTH family regulatory protein KW556_RS05405 PF00795 Carbon-nitrogen hydrolase KW556_RS05410 PF03471 Transporter associated domain KW556_RS05410 PF00571 CBS domain KW556_RS05415 PF02130 Uncharacterized protein family UPF0054 KW556_RS05420 PF02562 PhoH-like protein KW556_RS05425 PF04055 Radical SAM superfamily KW556_RS05425 PF01938 TRAM domain KW556_RS05425 PF00919 Uncharacterized protein family UPF0004 KW556_RS05430 PF01494 FAD binding domain KW556_RS05435 PF00857 Isochorismatase family KW556_RS05440 PF00313 'Cold-shock' DNA-binding domain KW556_RS05445 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS05445 PF05230 MASE2 domain KW556_RS05450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS05450 PF03466 LysR substrate binding domain KW556_RS05460 PF13419 Haloacid dehalogenase-like hydrolase KW556_RS05470 PF08448 PAS fold KW556_RS05470 PF13426 PAS domain KW556_RS05470 PF05231 MASE1 KW556_RS05470 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS05470 PF08447 PAS fold KW556_RS05470 PF00563 EAL domain KW556_RS05480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KW556_RS05480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KW556_RS05490 PF01132 Elongation factor P (EF-P) OB domain KW556_RS05490 PF08207 Elongation factor P (EF-P) KOW-like domain KW556_RS05490 PF09285 Elongation factor P, C-terminal KW556_RS05500 PF00478 IMP dehydrogenase / GMP reductase domain KW556_RS05510 PF08521 Two-component sensor kinase N-terminal KW556_RS05510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS05510 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS05515 PF00072 Response regulator receiver domain KW556_RS05515 PF00486 Transcriptional regulatory protein, C terminal KW556_RS05525 PF01609 Transposase DDE domain KW556_RS05535 PF00106 short chain dehydrogenase KW556_RS05545 PF00501 AMP-binding enzyme KW556_RS05560 PF01266 FAD dependent oxidoreductase KW556_RS05570 PF17932 Tetracyclin repressor-like, C-terminal domain KW556_RS05570 PF00440 Bacterial regulatory proteins, tetR family KW556_RS05575 PF06224 Winged helix DNA-binding domain KW556_RS05585 PF07687 Peptidase dimerisation domain KW556_RS05585 PF01546 Peptidase family M20/M25/M40 KW556_RS05590 PF07670 Nucleoside recognition KW556_RS05595 PF07670 Nucleoside recognition KW556_RS05600 PF02313 Fumarate reductase subunit D KW556_RS05605 PF02300 Fumarate reductase subunit C KW556_RS05610 PF13085 2Fe-2S iron-sulfur cluster binding domain KW556_RS05610 PF13183 4Fe-4S dicluster domain KW556_RS05615 PF00890 FAD binding domain KW556_RS05615 PF02910 Fumarate reductase flavoprotein C-term KW556_RS05635 PF03009 Glycerophosphoryl diester phosphodiesterase family KW556_RS05640 PF00924 Mechanosensitive ion channel KW556_RS05640 PF12795 Mechanosensitive ion channel porin domain KW556_RS05640 PF12794 Mechanosensitive ion channel inner membrane domain 1 KW556_RS05650 PF01551 Peptidase family M23 KW556_RS05650 PF01476 LysM domain KW556_RS05650 PF08525 Opacity-associated protein A N-terminal motif KW556_RS05660 PF03466 LysR substrate binding domain KW556_RS05660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS05675 PF01609 Transposase DDE domain KW556_RS05680 PF02743 Cache domain KW556_RS05680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS05680 PF00672 HAMP domain KW556_RS05685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS05685 PF03466 LysR substrate binding domain KW556_RS05690 PF17092 Penicillin-binding protein OB-like domain KW556_RS05690 PF00912 Transglycosylase KW556_RS05690 PF00905 Penicillin binding protein transpeptidase domain KW556_RS05695 PF11104 Type IV pilus assembly protein PilM; KW556_RS05715 PF00263 Bacterial type II and III secretion system protein KW556_RS05715 PF03958 Bacterial type II/III secretion system short domain KW556_RS05715 PF07660 Secretin and TonB N terminus short domain KW556_RS05715 PF11741 AMIN domain KW556_RS05720 PF01202 Shikimate kinase KW556_RS05725 PF01761 3-dehydroquinate synthase KW556_RS05735 PF02086 D12 class N6 adenine-specific DNA methyltransferase KW556_RS05740 PF00834 Ribulose-phosphate 3 epimerase family KW556_RS05745 PF13419 Haloacid dehalogenase-like hydrolase KW556_RS05750 PF00579 tRNA synthetases class I (W and Y) KW556_RS05760 PF00117 Glutamine amidotransferase class-I KW556_RS05765 PF00202 Aminotransferase class-III KW556_RS05770 PF04958 Arginine N-succinyltransferase beta subunit KW556_RS05775 PF00171 Aldehyde dehydrogenase family KW556_RS05790 PF13419 Haloacid dehalogenase-like hydrolase KW556_RS05795 PF07690 Major Facilitator Superfamily KW556_RS05800 PF10371 Domain of unknown function KW556_RS05800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KW556_RS05800 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KW556_RS05800 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KW556_RS05800 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KW556_RS05805 PF00128 Alpha amylase, catalytic domain KW556_RS05805 PF16657 Maltogenic Amylase, C-terminal domain KW556_RS05815 PF04266 ASCH domain KW556_RS05820 PF00027 Cyclic nucleotide-binding domain KW556_RS05820 PF07885 Ion channel KW556_RS05825 PF01048 Phosphorylase superfamily KW556_RS05830 PF04973 Nicotinamide mononucleotide transporter KW556_RS05835 PF03600 Citrate transporter KW556_RS05835 PF02080 TrkA-C domain KW556_RS05880 PF06071 Protein of unknown function (DUF933) KW556_RS05880 PF01926 50S ribosome-binding GTPase KW556_RS05885 PF01195 Peptidyl-tRNA hydrolase KW556_RS05890 PF02872 5'-nucleotidase, C-terminal domain KW556_RS05890 PF00149 Calcineurin-like phosphoesterase KW556_RS05895 PF14572 Phosphoribosyl synthetase-associated domain KW556_RS05895 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KW556_RS05905 PF08544 GHMP kinases C terminal KW556_RS05905 PF00288 GHMP kinases N terminal domain KW556_RS05910 PF03550 Outer membrane lipoprotein LolB KW556_RS05915 PF01488 Shikimate / quinate 5-dehydrogenase KW556_RS05915 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KW556_RS05915 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KW556_RS05920 PF00472 RF-1 domain KW556_RS05920 PF03462 PCRF domain KW556_RS05925 PF13847 Methyltransferase domain KW556_RS05925 PF17827 PrmC N-terminal domain KW556_RS05935 PF13369 Transglutaminase-like superfamily KW556_RS05940 PF00793 DAHP synthetase I family KW556_RS05945 PF01228 Glycine radical KW556_RS05955 PF03167 Uracil DNA glycosylase superfamily KW556_RS05970 PF01161 Phosphatidylethanolamine-binding protein KW556_RS05980 PF01609 Transposase DDE domain KW556_RS05990 PF00691 OmpA family KW556_RS05990 PF04972 BON domain KW556_RS06020 PF00709 Adenylosuccinate synthetase KW556_RS06035 PF00155 Aminotransferase class I and II KW556_RS06040 PF07690 Major Facilitator Superfamily KW556_RS06045 PF03466 LysR substrate binding domain KW556_RS06045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS06050 PF00106 short chain dehydrogenase KW556_RS06055 PF08496 Peptidase family S49 N-terminal KW556_RS06055 PF01343 Peptidase family S49 KW556_RS06060 PF07690 Major Facilitator Superfamily KW556_RS06065 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS06070 PF02635 DsrE/DsrF-like family KW556_RS06080 PF12838 4Fe-4S dicluster domain KW556_RS06085 PF16325 Peptidase family U32 C-terminal domain KW556_RS06085 PF01136 Peptidase family U32 KW556_RS06095 PF00563 EAL domain KW556_RS06095 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS06095 PF03707 Bacterial signalling protein N terminal repeat KW556_RS06105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS06105 PF00360 Phytochrome region KW556_RS06105 PF08446 PAS fold KW556_RS06105 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS06105 PF01590 GAF domain KW556_RS06115 PF00665 Integrase core domain KW556_RS06120 PF01695 IstB-like ATP binding protein KW556_RS06170 PF05598 Transposase domain (DUF772) KW556_RS06170 PF01609 Transposase DDE domain KW556_RS06180 PF00440 Bacterial regulatory proteins, tetR family KW556_RS06185 PF13533 Biotin-lipoyl like KW556_RS06195 PF00005 ABC transporter KW556_RS06210 PF02796 Helix-turn-helix domain of resolvase KW556_RS06210 PF00239 Resolvase, N terminal domain KW556_RS06240 PF00816 H-NS histone family KW556_RS06255 PF09722 Protein of unknown function (DUF2384) KW556_RS06260 PF01219 Prokaryotic diacylglycerol kinase KW556_RS06265 PF00884 Sulfatase KW556_RS06265 PF08019 Phosphoethanolamine transferase EptA/EptB KW556_RS06270 PF08019 Phosphoethanolamine transferase EptA/EptB KW556_RS06270 PF00884 Sulfatase KW556_RS06285 PF01627 Hpt domain KW556_RS06285 PF00672 HAMP domain KW556_RS06285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS06285 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS06285 PF00072 Response regulator receiver domain KW556_RS06285 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KW556_RS06310 PF04996 Succinylarginine dihydrolase KW556_RS06315 PF01751 Toprim domain KW556_RS06315 PF01131 DNA topoisomerase KW556_RS06315 PF08272 Topoisomerase I zinc-ribbon-like KW556_RS06315 PF01396 Topoisomerase DNA binding C4 zinc finger KW556_RS06330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS06330 PF08447 PAS fold KW556_RS06335 PF00728 Glycosyl hydrolase family 20, catalytic domain KW556_RS06335 PF02838 Glycosyl hydrolase family 20, domain 2 KW556_RS06340 PF01869 BadF/BadG/BcrA/BcrD ATPase family KW556_RS06350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KW556_RS06350 PF00005 ABC transporter KW556_RS06355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KW556_RS06355 PF00005 ABC transporter KW556_RS06360 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS06360 PF12911 N-terminal TM domain of oligopeptide transport permease C KW556_RS06365 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS06370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KW556_RS06375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS06375 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS06375 PF09308 LuxQ, periplasmic KW556_RS06375 PF00072 Response regulator receiver domain KW556_RS06395 PF10725 Protein of unknown function (DUF2517) KW556_RS06405 PF05114 Protein of unknown function (DUF692) KW556_RS06425 PF13426 PAS domain KW556_RS06425 PF08447 PAS fold KW556_RS06425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS06440 PF04632 Fusaric acid resistance protein family KW556_RS06445 PF03453 MoeA N-terminal region (domain I and II) KW556_RS06445 PF03454 MoeA C-terminal region (domain IV) KW556_RS06445 PF00994 Probable molybdopterin binding domain KW556_RS06450 PF12804 MobA-like NTP transferase domain KW556_RS06455 PF00005 ABC transporter KW556_RS06460 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS06465 PF12849 PBP superfamily domain KW556_RS06470 PF02954 Bacterial regulatory protein, Fis family KW556_RS06470 PF00072 Response regulator receiver domain KW556_RS06470 PF00158 Sigma-54 interaction domain KW556_RS06475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS06475 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS06475 PF00989 PAS fold KW556_RS06485 PF02634 FdhD/NarQ family KW556_RS06495 PF13358 DDE superfamily endonuclease KW556_RS06495 PF13592 Winged helix-turn helix KW556_RS06550 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KW556_RS06550 PF01568 Molydopterin dinucleotide binding domain KW556_RS06550 PF00384 Molybdopterin oxidoreductase KW556_RS06550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KW556_RS06550 PF12838 4Fe-4S dicluster domain KW556_RS06550 PF01568 Molydopterin dinucleotide binding domain KW556_RS06550 PF00384 Molybdopterin oxidoreductase KW556_RS06550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KW556_RS06550 PF12838 4Fe-4S dicluster domain KW556_RS06550 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KW556_RS06555 PF13247 4Fe-4S dicluster domain KW556_RS06575 PF00390 Malic enzyme, N-terminal domain KW556_RS06575 PF03949 Malic enzyme, NAD binding domain KW556_RS06580 PF16998 17 kDa outer membrane surface antigen KW556_RS06580 PF05433 Glycine zipper 2TM domain KW556_RS06600 PF00860 Permease family KW556_RS06605 PF00497 Bacterial extracellular solute-binding proteins, family 3 KW556_RS06610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS06610 PF00672 HAMP domain KW556_RS06640 PF01418 Helix-turn-helix domain, rpiR family KW556_RS06640 PF01380 SIS domain KW556_RS06645 PF00224 Pyruvate kinase, barrel domain KW556_RS06645 PF02887 Pyruvate kinase, alpha/beta domain KW556_RS06660 PF02049 Flagellar hook-basal body complex protein FliE KW556_RS06665 PF01514 Secretory protein of YscJ/FliF family KW556_RS06665 PF08345 Flagellar M-ring protein C-terminal KW556_RS06670 PF01706 FliG C-terminal domain KW556_RS06670 PF14841 FliG middle domain KW556_RS06670 PF14842 FliG N-terminal domain KW556_RS06680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KW556_RS06680 PF18269 T3SS EscN ATPase C-terminal domain KW556_RS06700 PF02154 Flagellar motor switch protein FliM KW556_RS06700 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KW556_RS06705 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KW556_RS06710 PF04347 Flagellar biosynthesis protein, FliO KW556_RS06715 PF00813 FliP family KW556_RS06720 PF01313 Bacterial export proteins, family 3 KW556_RS06725 PF01311 Bacterial export proteins, family 1 KW556_RS06730 PF01312 FlhB HrpN YscU SpaS Family KW556_RS06735 PF00771 FHIPEP family KW556_RS06740 PF00448 SRP54-type protein, GTPase domain KW556_RS06745 PF10609 NUBPL iron-transfer P-loop NTPase KW556_RS06750 PF04542 Sigma-70 region 2 KW556_RS06750 PF04539 Sigma-70 region 3 KW556_RS06750 PF04545 Sigma-70, region 4 KW556_RS06755 PF00072 Response regulator receiver domain KW556_RS06760 PF04344 Chemotaxis phosphatase, CheZ KW556_RS06765 PF01584 CheW-like domain KW556_RS06765 PF02895 Signal transducing histidine kinase, homodimeric domain KW556_RS06765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS06765 PF01627 Hpt domain KW556_RS06765 PF00072 Response regulator receiver domain KW556_RS06770 PF01339 CheB methylesterase KW556_RS06770 PF00072 Response regulator receiver domain KW556_RS06775 PF01618 MotA/TolQ/ExbB proton channel family KW556_RS06780 PF00691 OmpA family KW556_RS06780 PF13677 Membrane MotB of proton-channel complex MotA/MotB KW556_RS06785 PF13614 AAA domain KW556_RS06795 PF01584 CheW-like domain KW556_RS06805 PF00005 ABC transporter KW556_RS06810 PF03379 CcmB protein KW556_RS06815 PF01578 Cytochrome C assembly protein KW556_RS06820 PF04995 Heme exporter protein D (CcmD) KW556_RS06825 PF03100 CcmE KW556_RS06830 PF01578 Cytochrome C assembly protein KW556_RS06830 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KW556_RS06835 PF08534 Redoxin KW556_RS06840 PF03918 Cytochrome C biogenesis protein KW556_RS06850 PF04333 MlaA lipoprotein KW556_RS06855 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KW556_RS06855 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KW556_RS06860 PF00462 Glutaredoxin KW556_RS06865 PF13592 Winged helix-turn helix KW556_RS06865 PF13358 DDE superfamily endonuclease KW556_RS06875 PF00291 Pyridoxal-phosphate dependent enzyme KW556_RS06880 PF03222 Tryptophan/tyrosine permease family KW556_RS06885 PF00871 Acetokinase family KW556_RS06890 PF02901 Pyruvate formate lyase-like KW556_RS06890 PF01228 Glycine radical KW556_RS06895 PF01042 Endoribonuclease L-PSP KW556_RS06900 PF01029 NusB family KW556_RS06900 PF01189 16S rRNA methyltransferase RsmB/F KW556_RS06905 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KW556_RS06905 PF01243 Pyridoxamine 5'-phosphate oxidase KW556_RS06910 PF13417 Glutathione S-transferase, N-terminal domain KW556_RS06925 PF08007 Cupin superfamily protein KW556_RS06930 PF00206 Lyase KW556_RS06930 PF08328 Adenylosuccinate lyase C-terminal KW556_RS06935 PF04356 Protein of unknown function (DUF489) KW556_RS06945 PF00293 NUDIX domain KW556_RS06950 PF00849 RNA pseudouridylate synthase KW556_RS06960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KW556_RS06965 PF07690 Major Facilitator Superfamily KW556_RS06970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KW556_RS06970 PF02378 Phosphotransferase system, EIIC KW556_RS06970 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KW556_RS07040 PF13580 SIS domain KW556_RS07055 PF00356 Bacterial regulatory proteins, lacI family KW556_RS07055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KW556_RS07060 PF00367 phosphotransferase system, EIIB KW556_RS07060 PF02378 Phosphotransferase system, EIIC KW556_RS07065 PF00155 Aminotransferase class I and II KW556_RS07070 PF02075 Crossover junction endodeoxyribonuclease RuvC KW556_RS07075 PF09317 Domain of unknown function (DUF1974) KW556_RS07075 PF02770 Acyl-CoA dehydrogenase, middle domain KW556_RS07075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KW556_RS07075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KW556_RS07080 PF00440 Bacterial regulatory proteins, tetR family KW556_RS07140 PF01668 SmpB protein KW556_RS07145 PF03364 Polyketide cyclase / dehydrase and lipid transport KW556_RS07150 PF03658 RnfH family Ubiquitin KW556_RS07155 PF01546 Peptidase family M20/M25/M40 KW556_RS07155 PF07687 Peptidase dimerisation domain KW556_RS07160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KW556_RS07160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KW556_RS07160 PF09317 Domain of unknown function (DUF1974) KW556_RS07160 PF02770 Acyl-CoA dehydrogenase, middle domain KW556_RS07165 PF13580 SIS domain KW556_RS07170 PF13230 Glutamine amidotransferases class-II KW556_RS07180 PF01933 Uncharacterised protein family UPF0052 KW556_RS07190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS07190 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS07190 PF09456 RcsC Alpha-Beta-Loop (ABL) KW556_RS07190 PF00072 Response regulator receiver domain KW556_RS07200 PF00196 Bacterial regulatory proteins, luxR family KW556_RS07200 PF00072 Response regulator receiver domain KW556_RS07205 PF00672 HAMP domain KW556_RS07205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS07205 PF07730 Histidine kinase KW556_RS07205 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KW556_RS07210 PF06463 Molybdenum Cofactor Synthesis C KW556_RS07210 PF04055 Radical SAM superfamily KW556_RS07215 PF12838 4Fe-4S dicluster domain KW556_RS07215 PF13187 4Fe-4S dicluster domain KW556_RS07225 PF00384 Molybdopterin oxidoreductase KW556_RS07225 PF01568 Molydopterin dinucleotide binding domain KW556_RS07225 PF10518 TAT (twin-arginine translocation) pathway signal sequence KW556_RS07225 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KW556_RS07230 PF12800 4Fe-4S binding domain KW556_RS07230 PF12838 4Fe-4S dicluster domain KW556_RS07235 PF12837 4Fe-4S binding domain KW556_RS07235 PF12801 4Fe-4S binding domain KW556_RS07240 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) KW556_RS07245 PF03264 NapC/NirT cytochrome c family, N-terminal region KW556_RS07250 PF00994 Probable molybdopterin binding domain KW556_RS07255 PF01967 MoaC family KW556_RS07260 PF02597 ThiS family KW556_RS07265 PF02391 MoaE protein KW556_RS07275 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS07280 PF00005 ABC transporter KW556_RS07280 PF03459 TOBE domain KW556_RS07285 PF12697 Alpha/beta hydrolase family KW556_RS07290 PF06406 StbA protein KW556_RS07300 PF00899 ThiF family KW556_RS07305 PF00994 Probable molybdopterin binding domain KW556_RS07305 PF03454 MoeA C-terminal region (domain IV) KW556_RS07305 PF03453 MoeA N-terminal region (domain I and II) KW556_RS07310 PF01227 GTP cyclohydrolase I KW556_RS07315 PF00672 HAMP domain KW556_RS07315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS07320 PF17200 Single Cache domain 2 KW556_RS07320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS07320 PF00672 HAMP domain KW556_RS07325 PF01268 Formate--tetrahydrofolate ligase KW556_RS07335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS07335 PF03466 LysR substrate binding domain KW556_RS07340 PF04264 YceI-like domain KW556_RS07380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KW556_RS07380 PF17944 Arginine decarboxylase C-terminal helical extension KW556_RS07380 PF17810 Arginine decarboxylase helical bundle domain KW556_RS07395 PF12729 Four helix bundle sensory module for signal transduction KW556_RS07395 PF00672 HAMP domain KW556_RS07395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS07405 PF01042 Endoribonuclease L-PSP KW556_RS07410 PF03313 Serine dehydratase alpha chain KW556_RS07415 PF08348 YheO-like PAS domain KW556_RS07415 PF13309 HTH domain KW556_RS07420 PF00300 Histidine phosphatase superfamily (branch 1) KW556_RS07425 PF12729 Four helix bundle sensory module for signal transduction KW556_RS07425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS07425 PF00672 HAMP domain KW556_RS07430 PF07055 Enoyl reductase FAD binding domain KW556_RS07430 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KW556_RS07430 PF12241 Trans-2-enoyl-CoA reductase catalytic region KW556_RS07435 PF03606 C4-dicarboxylate anaerobic carrier KW556_RS07440 PF00155 Aminotransferase class I and II KW556_RS07450 PF00230 Major intrinsic protein KW556_RS07455 PF01551 Peptidase family M23 KW556_RS07455 PF10145 Phage-related minor tail protein KW556_RS07455 PF01464 Transglycosylase SLT domain KW556_RS07470 PF13396 Phospholipase_D-nuclease N-terminal KW556_RS07470 PF13091 PLD-like domain KW556_RS07480 PF01842 ACT domain KW556_RS07480 PF00551 Formyl transferase KW556_RS07485 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KW556_RS07495 PF00085 Thioredoxin KW556_RS07500 PF01648 4'-phosphopantetheinyl transferase superfamily KW556_RS07505 PF00877 NlpC/P60 family KW556_RS07510 PF05971 RNA methyltransferase KW556_RS07515 PF01575 MaoC like domain KW556_RS07520 PF00939 Sodium:sulfate symporter transmembrane region KW556_RS07540 PF07509 Protein of unknown function (DUF1523) KW556_RS07545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS07545 PF00672 HAMP domain KW556_RS07545 PF12729 Four helix bundle sensory module for signal transduction KW556_RS07550 PF01810 LysE type translocator KW556_RS07560 PF00171 Aldehyde dehydrogenase family KW556_RS07560 PF00465 Iron-containing alcohol dehydrogenase KW556_RS07565 PF01914 MarC family integral membrane protein KW556_RS07570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KW556_RS07575 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS07580 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS07580 PF12911 N-terminal TM domain of oligopeptide transport permease C KW556_RS07585 PF00005 ABC transporter KW556_RS07585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KW556_RS07590 PF00005 ABC transporter KW556_RS07590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KW556_RS07595 PF03741 Integral membrane protein TerC family KW556_RS07600 PF00842 Alanine racemase, C-terminal domain KW556_RS07600 PF01168 Alanine racemase, N-terminal domain KW556_RS07610 PF00437 Type II/IV secretion system protein KW556_RS07625 PF01032 FecCD transport family KW556_RS07630 PF00005 ABC transporter KW556_RS07635 PF00583 Acetyltransferase (GNAT) family KW556_RS07640 PF00793 DAHP synthetase I family KW556_RS07645 PF01219 Prokaryotic diacylglycerol kinase KW556_RS07650 PF01842 ACT domain KW556_RS07650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KW556_RS07650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KW556_RS07655 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KW556_RS07660 PF01812 5-formyltetrahydrofolate cyclo-ligase family KW556_RS07675 PF01113 Dihydrodipicolinate reductase, N-terminus KW556_RS07675 PF05173 Dihydrodipicolinate reductase, C-terminus KW556_RS07680 PF00117 Glutamine amidotransferase class-I KW556_RS07680 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KW556_RS07685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KW556_RS07685 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KW556_RS07685 PF02142 MGS-like domain KW556_RS07690 PF07759 Protein of unknown function (DUF1615) KW556_RS07715 PF02080 TrkA-C domain KW556_RS07715 PF03471 Transporter associated domain KW556_RS07715 PF00999 Sodium/hydrogen exchanger family KW556_RS07725 PF02557 D-alanyl-D-alanine carboxypeptidase KW556_RS07730 PF07687 Peptidase dimerisation domain KW556_RS07730 PF01546 Peptidase family M20/M25/M40 KW556_RS07735 PF03960 ArsC family KW556_RS07745 PF03606 C4-dicarboxylate anaerobic carrier KW556_RS07750 PF07687 Peptidase dimerisation domain KW556_RS07750 PF01546 Peptidase family M20/M25/M40 KW556_RS07760 PF03605 Anaerobic c4-dicarboxylate membrane transporter KW556_RS07770 PF00152 tRNA synthetases class II (D, K and N) KW556_RS07770 PF01336 OB-fold nucleic acid binding domain KW556_RS07785 PF00202 Aminotransferase class-III KW556_RS07790 PF06968 Biotin and Thiamin Synthesis associated domain KW556_RS07790 PF04055 Radical SAM superfamily KW556_RS07795 PF00155 Aminotransferase class I and II KW556_RS07800 PF12697 Alpha/beta hydrolase family KW556_RS07800 PF08241 Methyltransferase domain KW556_RS07810 PF01435 Peptidase family M48 KW556_RS07815 PF08447 PAS fold KW556_RS07815 PF13426 PAS domain KW556_RS07815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS07820 PF03476 MOSC N-terminal beta barrel domain KW556_RS07820 PF00111 2Fe-2S iron-sulfur cluster binding domain KW556_RS07820 PF03473 MOSC domain KW556_RS07820 PF03476 MOSC N-terminal beta barrel domain KW556_RS07820 PF00111 2Fe-2S iron-sulfur cluster binding domain KW556_RS07820 PF03473 MOSC domain KW556_RS07830 PF07992 Pyridine nucleotide-disulphide oxidoreductase KW556_RS07830 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KW556_RS07830 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KW556_RS07835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KW556_RS07835 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KW556_RS07835 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KW556_RS07835 PF10371 Domain of unknown function KW556_RS07835 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KW556_RS07850 PF01370 NAD dependent epimerase/dehydratase family KW556_RS07855 PF03061 Thioesterase superfamily KW556_RS07865 PF03372 Endonuclease/Exonuclease/phosphatase family KW556_RS07870 PF00462 Glutaredoxin KW556_RS07875 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family KW556_RS07880 PF00271 Helicase conserved C-terminal domain KW556_RS07880 PF04851 Type III restriction enzyme, res subunit KW556_RS07885 PF00529 HlyD membrane-fusion protein of T1SS KW556_RS07885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KW556_RS07890 PF11742 Protein of unknown function (DUF3302) KW556_RS07895 PF02554 Carbon starvation protein CstA KW556_RS07900 PF04397 LytTr DNA-binding domain KW556_RS07900 PF00072 Response regulator receiver domain KW556_RS07905 PF07694 5TMR of 5TMR-LYT KW556_RS07905 PF06580 Histidine kinase KW556_RS07910 PF01966 HD domain KW556_RS07915 PF08019 Phosphoethanolamine transferase EptA/EptB KW556_RS07915 PF00884 Sulfatase KW556_RS07920 PF01047 MarR family KW556_RS07920 PF00480 ROK family KW556_RS07925 PF01979 Amidohydrolase family KW556_RS07930 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KW556_RS07935 PF00367 phosphotransferase system, EIIB KW556_RS07935 PF02378 Phosphotransferase system, EIIC KW556_RS07935 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KW556_RS07940 PF02838 Glycosyl hydrolase family 20, domain 2 KW556_RS07940 PF00728 Glycosyl hydrolase family 20, catalytic domain KW556_RS07940 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain KW556_RS07940 PF03173 Putative carbohydrate binding domain KW556_RS07945 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KW556_RS07945 PF00749 tRNA synthetases class I (E and Q), catalytic domain KW556_RS07950 PF01475 Ferric uptake regulator family KW556_RS07960 PF00258 Flavodoxin KW556_RS07965 PF01402 Ribbon-helix-helix protein, copG family KW556_RS07975 PF12697 Alpha/beta hydrolase family KW556_RS07980 PF03925 SeqA protein C-terminal domain KW556_RS07980 PF17206 SeqA protein N-terminal domain KW556_RS07985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KW556_RS07985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KW556_RS07985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KW556_RS07985 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KW556_RS07995 PF01047 MarR family KW556_RS08000 PF13406 Transglycosylase SLT domain KW556_RS08005 PF01066 CDP-alcohol phosphatidyltransferase KW556_RS08010 PF00005 ABC transporter KW556_RS08020 PF13416 Bacterial extracellular solute-binding protein KW556_RS08025 PF00403 Heavy-metal-associated domain KW556_RS08025 PF07992 Pyridine nucleotide-disulphide oxidoreductase KW556_RS08025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KW556_RS08030 PF02627 Carboxymuconolactone decarboxylase family KW556_RS08050 PF07244 Surface antigen variable number repeat KW556_RS08050 PF17243 POTRA domain TamA domain 1 KW556_RS08050 PF01103 Surface antigen KW556_RS08055 PF04357 TamB, inner membrane protein subunit of TAM complex KW556_RS08075 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KW556_RS08080 PF00563 EAL domain KW556_RS08080 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS08080 PF03707 Bacterial signalling protein N terminal repeat KW556_RS08085 PF14718 Soluble lytic murein transglycosylase L domain KW556_RS08085 PF01464 Transglycosylase SLT domain KW556_RS08090 PF00356 Bacterial regulatory proteins, lacI family KW556_RS08095 PF00793 DAHP synthetase I family KW556_RS08100 PF07715 TonB-dependent Receptor Plug Domain KW556_RS08100 PF00593 TonB dependent receptor KW556_RS08105 PF00425 chorismate binding enzyme KW556_RS08110 PF00501 AMP-binding enzyme KW556_RS08110 PF13193 AMP-binding enzyme C-terminal domain KW556_RS08115 PF00550 Phosphopantetheine attachment site KW556_RS08115 PF00857 Isochorismatase family KW556_RS08125 PF00550 Phosphopantetheine attachment site KW556_RS08125 PF00668 Condensation domain KW556_RS08125 PF00501 AMP-binding enzyme KW556_RS08125 PF00975 Thioesterase domain KW556_RS08135 PF00676 Dehydrogenase E1 component KW556_RS08140 PF02780 Transketolase, C-terminal domain KW556_RS08140 PF02779 Transketolase, pyrimidine binding domain KW556_RS08145 PF02817 e3 binding domain KW556_RS08145 PF00364 Biotin-requiring enzyme KW556_RS08145 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KW556_RS08150 PF00313 'Cold-shock' DNA-binding domain KW556_RS08175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KW556_RS08180 PF00455 DeoR C terminal sensor domain KW556_RS08180 PF08220 DeoR-like helix-turn-helix domain KW556_RS08185 PF01228 Glycine radical KW556_RS08185 PF02901 Pyruvate formate lyase-like KW556_RS08190 PF04055 Radical SAM superfamily KW556_RS08195 PF00923 Transaldolase/Fructose-6-phosphate aldolase KW556_RS08205 PF01966 HD domain KW556_RS08210 PF01479 S4 domain KW556_RS08210 PF00849 RNA pseudouridylate synthase KW556_RS08220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KW556_RS08225 PF12850 Calcineurin-like phosphoesterase superfamily domain KW556_RS08240 PF13144 Chaperone for flagella basal body P-ring formation KW556_RS08245 PF00072 Response regulator receiver domain KW556_RS08245 PF01584 CheW-like domain KW556_RS08250 PF03705 CheR methyltransferase, all-alpha domain KW556_RS08250 PF01739 CheR methyltransferase, SAM binding domain KW556_RS08255 PF00460 Flagella basal body rod protein KW556_RS08260 PF00460 Flagella basal body rod protein KW556_RS08260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KW556_RS08270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KW556_RS08270 PF00460 Flagella basal body rod protein KW556_RS08270 PF07559 Flagellar basal body protein FlaE KW556_RS08275 PF00460 Flagella basal body rod protein KW556_RS08275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KW556_RS08280 PF00460 Flagella basal body rod protein KW556_RS08280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KW556_RS08285 PF02107 Flagellar L-ring protein KW556_RS08290 PF02119 Flagellar P-ring protein KW556_RS08295 PF10135 Rod binding protein KW556_RS08295 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KW556_RS08300 PF07196 Flagellin hook IN motif KW556_RS08300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KW556_RS08305 PF00669 Bacterial flagellin N-terminal helical region KW556_RS08315 PF03448 MgtE intracellular N domain KW556_RS08315 PF01769 Divalent cation transporter KW556_RS08315 PF00571 CBS domain KW556_RS08320 PF02541 Ppx/GppA phosphatase family KW556_RS08325 PF13090 Polyphosphate kinase C-terminal domain 2 KW556_RS08325 PF17941 Polyphosphate kinase C-terminal domain 1 KW556_RS08325 PF13089 Polyphosphate kinase N-terminal domain KW556_RS08325 PF02503 Polyphosphate kinase middle domain KW556_RS08330 PF01842 ACT domain KW556_RS08340 PF06490 Flagellar regulatory protein FleQ KW556_RS08340 PF02954 Bacterial regulatory protein, Fis family KW556_RS08340 PF00158 Sigma-54 interaction domain KW556_RS08345 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS08345 PF13188 PAS domain KW556_RS08345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS08350 PF02954 Bacterial regulatory protein, Fis family KW556_RS08350 PF00072 Response regulator receiver domain KW556_RS08350 PF00158 Sigma-54 interaction domain KW556_RS08355 PF01784 NIF3 (NGG1p interacting factor 3) KW556_RS08360 PF00551 Formyl transferase KW556_RS08365 PF00586 AIR synthase related protein, N-terminal domain KW556_RS08365 PF02769 AIR synthase related protein, C-terminal domain KW556_RS08380 PF00308 Bacterial dnaA protein KW556_RS08385 PF00463 Isocitrate lyase family KW556_RS08390 PF01274 Malate synthase KW556_RS08405 PF14437 MafB19-like deaminase KW556_RS08410 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS08415 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS08420 PF00005 ABC transporter KW556_RS08425 PF01895 PhoU domain KW556_RS08430 PF00571 CBS domain KW556_RS08430 PF03471 Transporter associated domain KW556_RS08430 PF01595 Cyclin M transmembrane N-terminal domain KW556_RS08440 PF02310 B12 binding domain KW556_RS08440 PF02607 B12 binding domain KW556_RS08440 PF02574 Homocysteine S-methyltransferase KW556_RS08440 PF00809 Pterin binding enzyme KW556_RS08440 PF02965 Vitamin B12 dependent methionine synthase, activation domain KW556_RS08445 PF13520 Amino acid permease KW556_RS08450 PF04116 Fatty acid hydroxylase superfamily KW556_RS08465 PF01817 Chorismate mutase type II KW556_RS08465 PF02153 Prephenate dehydrogenase KW556_RS08470 PF00793 DAHP synthetase I family KW556_RS08475 PF00483 Nucleotidyl transferase KW556_RS08480 PF07549 SecD/SecF GG Motif KW556_RS08480 PF02355 Protein export membrane protein KW556_RS08485 PF02355 Protein export membrane protein KW556_RS08485 PF13721 SecD export protein N-terminal TM region KW556_RS08485 PF07549 SecD/SecF GG Motif KW556_RS08520 PF01230 HIT domain KW556_RS08525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS08525 PF00672 HAMP domain KW556_RS08535 PF01979 Amidohydrolase family KW556_RS08550 PF00375 Sodium:dicarboxylate symporter family KW556_RS08555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS08555 PF13426 PAS domain KW556_RS08555 PF08447 PAS fold KW556_RS08565 PF05661 Protein of unknown function (DUF808) KW556_RS08570 PF08439 Oligopeptidase F KW556_RS08570 PF01432 Peptidase family M3 KW556_RS08575 PF00860 Permease family KW556_RS08580 PF05728 Uncharacterised protein family (UPF0227) KW556_RS08585 PF07992 Pyridine nucleotide-disulphide oxidoreductase KW556_RS08595 PF04055 Radical SAM superfamily KW556_RS08600 PF03707 Bacterial signalling protein N terminal repeat KW556_RS08600 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS08600 PF00563 EAL domain KW556_RS08605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KW556_RS08605 PF07992 Pyridine nucleotide-disulphide oxidoreductase KW556_RS08615 PF00207 Alpha-2-macroglobulin family KW556_RS08615 PF07678 A-macroglobulin TED domain KW556_RS08615 PF01835 MG2 domain KW556_RS08615 PF17962 Bacterial macroglobulin domain 6 KW556_RS08615 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain KW556_RS08615 PF11974 Bacterial alpha-2-macroglobulin MG3 domain KW556_RS08615 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain KW556_RS08615 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain KW556_RS08615 PF07703 Alpha-2-macroglobulin bait region domain KW556_RS08620 PF06832 Penicillin-Binding Protein C-terminus Family KW556_RS08620 PF00912 Transglycosylase KW556_RS08620 PF00905 Penicillin binding protein transpeptidase domain KW556_RS08630 PF12167 Arm DNA-binding domain KW556_RS08630 PF00589 Phage integrase family KW556_RS08675 PF04381 Putative exonuclease, RdgC KW556_RS08705 PF12684 PDDEXK-like domain of unknown function (DUF3799) KW556_RS08705 PF06630 Enterobacterial exodeoxyribonuclease VIII KW556_RS08750 PF09669 Phage regulatory protein Rha (Phage_pRha) KW556_RS08750 PF03374 Phage antirepressor protein KilAC domain KW556_RS08945 PF01609 Transposase DDE domain KW556_RS08965 PF02568 Thiamine biosynthesis protein (ThiI) KW556_RS08965 PF02926 THUMP domain KW556_RS08975 PF03458 UPF0126 domain KW556_RS08980 PF00700 Bacterial flagellin C-terminal helical region KW556_RS08980 PF07196 Flagellin hook IN motif KW556_RS08980 PF00669 Bacterial flagellin N-terminal helical region KW556_RS08990 PF00669 Bacterial flagellin N-terminal helical region KW556_RS08990 PF00700 Bacterial flagellin C-terminal helical region KW556_RS08990 PF07196 Flagellin hook IN motif KW556_RS09000 PF07196 Flagellin hook IN motif KW556_RS09000 PF07195 Flagellar hook-associated protein 2 C-terminus KW556_RS09000 PF02465 Flagellar hook-associated protein 2 N-terminus KW556_RS09005 PF02561 Flagellar protein FliS KW556_RS09025 PF03102 NeuB family KW556_RS09025 PF08666 SAF domain KW556_RS09040 PF13419 Haloacid dehalogenase-like hydrolase KW556_RS09045 PF00202 Aminotransferase class-III KW556_RS09050 PF02348 Cytidylyltransferase KW556_RS09060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KW556_RS09065 PF02719 Polysaccharide biosynthesis protein KW556_RS09070 PF01497 Periplasmic binding protein KW556_RS09080 PF01048 Phosphorylase superfamily KW556_RS09085 PF02535 ZIP Zinc transporter KW556_RS09090 PF00459 Inositol monophosphatase family KW556_RS09100 PF00043 Glutathione S-transferase, C-terminal domain KW556_RS09100 PF02798 Glutathione S-transferase, N-terminal domain KW556_RS09105 PF07690 Major Facilitator Superfamily KW556_RS09110 PF03466 LysR substrate binding domain KW556_RS09110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS09115 PF02634 FdhD/NarQ family KW556_RS09120 PF00384 Molybdopterin oxidoreductase KW556_RS09130 PF05164 Cell division protein ZapA KW556_RS09135 PF03695 Uncharacterised protein family (UPF0149) KW556_RS09140 PF01494 FAD binding domain KW556_RS09145 PF01494 FAD binding domain KW556_RS09155 PF08669 Glycine cleavage T-protein C-terminal barrel domain KW556_RS09155 PF01571 Aminomethyltransferase folate-binding domain KW556_RS09160 PF01597 Glycine cleavage H-protein KW556_RS09165 PF02347 Glycine cleavage system P-protein KW556_RS09170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS09170 PF08447 PAS fold KW556_RS09185 PF00324 Amino acid permease KW556_RS09195 PF03618 Kinase/pyrophosphorylase KW556_RS09200 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KW556_RS09200 PF02896 PEP-utilising enzyme, TIM barrel domain KW556_RS09200 PF00391 PEP-utilising enzyme, mobile domain KW556_RS09210 PF00082 Subtilase family KW556_RS09210 PF01483 Proprotein convertase P-domain KW556_RS09220 PF05230 MASE2 domain KW556_RS09220 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS09245 PF03180 NLPA lipoprotein KW556_RS09250 PF00884 Sulfatase KW556_RS09250 PF11893 Domain of unknown function (DUF3413) KW556_RS09255 PF07208 Protein of unknown function (DUF1414) KW556_RS09260 PF04245 37-kD nucleoid-associated bacterial protein KW556_RS09265 PF01547 Bacterial extracellular solute-binding protein KW556_RS09270 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS09270 PF14785 Maltose transport system permease protein MalF P2 domain KW556_RS09275 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS09280 PF00005 ABC transporter KW556_RS09280 PF08402 TOBE domain KW556_RS09285 PF03976 Polyphosphate kinase 2 (PPK2) KW556_RS09290 PF00561 alpha/beta hydrolase fold KW556_RS09300 PF01594 AI-2E family transporter KW556_RS09310 PF07720 Tetratricopeptide repeat KW556_RS09310 PF01435 Peptidase family M48 KW556_RS09315 PF00578 AhpC/TSA family KW556_RS09320 PF03960 ArsC family KW556_RS09330 PF04336 Acyl carrier protein phosphodiesterase KW556_RS09335 PF00497 Bacterial extracellular solute-binding proteins, family 3 KW556_RS09340 PF01979 Amidohydrolase family KW556_RS09345 PF03956 Lysine exporter LysO KW556_RS09350 PF00005 ABC transporter KW556_RS09355 PF00497 Bacterial extracellular solute-binding proteins, family 3 KW556_RS09360 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS09365 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS09370 PF00849 RNA pseudouridylate synthase KW556_RS09380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KW556_RS09385 PF04209 homogentisate 1,2-dioxygenase KW556_RS09395 PF02798 Glutathione S-transferase, N-terminal domain KW556_RS09395 PF14497 Glutathione S-transferase, C-terminal domain KW556_RS09425 PF13677 Membrane MotB of proton-channel complex MotA/MotB KW556_RS09425 PF00691 OmpA family KW556_RS09430 PF01618 MotA/TolQ/ExbB proton channel family KW556_RS09440 PF13358 DDE superfamily endonuclease KW556_RS09440 PF13592 Winged helix-turn helix KW556_RS09445 PF05598 Transposase domain (DUF772) KW556_RS09445 PF01609 Transposase DDE domain KW556_RS09455 PF00072 Response regulator receiver domain KW556_RS09460 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS09460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS09460 PF00672 HAMP domain KW556_RS09460 PF00072 Response regulator receiver domain KW556_RS09460 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KW556_RS09460 PF01627 Hpt domain KW556_RS09485 PF03432 Relaxase/Mobilisation nuclease domain KW556_RS09510 PF00589 Phage integrase family KW556_RS09510 PF02899 Phage integrase, N-terminal SAM-like domain KW556_RS09530 PF04536 TPM domain KW556_RS09540 PF03411 Penicillin-insensitive murein endopeptidase KW556_RS09545 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS09550 PF00497 Bacterial extracellular solute-binding proteins, family 3 KW556_RS09555 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS09560 PF00005 ABC transporter KW556_RS09570 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KW556_RS09575 PF00248 Aldo/keto reductase family KW556_RS09585 PF00106 short chain dehydrogenase KW556_RS09590 PF01212 Beta-eliminating lyase KW556_RS09600 PF00072 Response regulator receiver domain KW556_RS09605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS09605 PF03466 LysR substrate binding domain KW556_RS09625 PF03806 AbgT putative transporter family KW556_RS09630 PF00881 Nitroreductase family KW556_RS09645 PF07690 Major Facilitator Superfamily KW556_RS09650 PF03466 LysR substrate binding domain KW556_RS09650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS09655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS09655 PF03466 LysR substrate binding domain KW556_RS09660 PF00925 GTP cyclohydrolase II KW556_RS09665 PF02224 Cytidylate kinase KW556_RS09670 PF00575 S1 RNA binding domain KW556_RS09675 PF00216 Bacterial DNA-binding protein KW556_RS09685 PF18073 Rubredoxin metal binding domain KW556_RS09690 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KW556_RS09705 PF06508 Queuosine biosynthesis protein QueC KW556_RS09710 PF04055 Radical SAM superfamily KW556_RS09715 PF12843 Putative quorum-sensing-regulated virulence factor KW556_RS09720 PF01923 Cobalamin adenosyltransferase KW556_RS09725 PF00816 H-NS histone family KW556_RS09730 PF03553 Na+/H+ antiporter family KW556_RS09735 PF00265 Thymidine kinase KW556_RS09745 PF10722 Putative bacterial sensory transduction regulator KW556_RS09760 PF09924 Uncharacterised conserved protein (DUF2156) KW556_RS09760 PF03706 Lysylphosphatidylglycerol synthase TM region KW556_RS09770 PF00672 HAMP domain KW556_RS09770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS09770 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS09775 PF00072 Response regulator receiver domain KW556_RS09775 PF00486 Transcriptional regulatory protein, C terminal KW556_RS09795 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KW556_RS09795 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KW556_RS09800 PF00313 'Cold-shock' DNA-binding domain KW556_RS09805 PF02617 ATP-dependent Clp protease adaptor protein ClpS KW556_RS09810 PF10431 C-terminal, D2-small domain, of ClpB protein KW556_RS09810 PF02861 Clp amino terminal domain, pathogenicity island component KW556_RS09810 PF17871 AAA lid domain KW556_RS09810 PF07724 AAA domain (Cdc48 subfamily) KW556_RS09810 PF00004 ATPase family associated with various cellular activities (AAA) KW556_RS09815 PF01176 Translation initiation factor 1A / IF-1 KW556_RS09820 PF04376 Arginine-tRNA-protein transferase, N terminus KW556_RS09820 PF04377 Arginine-tRNA-protein transferase, C terminus KW556_RS09825 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KW556_RS09830 PF05433 Glycine zipper 2TM domain KW556_RS09835 PF17158 Membrane-associated sensor, integral membrane domain KW556_RS09835 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS09840 PF07992 Pyridine nucleotide-disulphide oxidoreductase KW556_RS09845 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KW556_RS09845 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KW556_RS09850 PF01037 Lrp/AsnC ligand binding domain KW556_RS09855 PF01580 FtsK/SpoIIIE family KW556_RS09855 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KW556_RS09855 PF17854 FtsK alpha domain KW556_RS09855 PF09397 Ftsk gamma domain KW556_RS09860 PF03548 Outer membrane lipoprotein carrier protein LolA KW556_RS09865 PF12002 MgsA AAA+ ATPase C terminal KW556_RS09865 PF00004 ATPase family associated with various cellular activities (AAA) KW556_RS09865 PF16193 AAA C-terminal domain KW556_RS09870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KW556_RS09870 PF02403 Seryl-tRNA synthetase N-terminal domain KW556_RS09880 PF02674 Colicin V production protein KW556_RS09885 PF00156 Phosphoribosyl transferase domain KW556_RS09890 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KW556_RS09895 PF05191 Adenylate kinase, active site lid KW556_RS09900 PF00762 Ferrochelatase KW556_RS09910 PF00294 pfkB family carbohydrate kinase KW556_RS09925 PF03707 Bacterial signalling protein N terminal repeat KW556_RS09925 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS09925 PF00563 EAL domain KW556_RS09930 PF00483 Nucleotidyl transferase KW556_RS09940 PF07273 Protein of unknown function (DUF1439) KW556_RS09950 PF13592 Winged helix-turn helix KW556_RS09950 PF13358 DDE superfamily endonuclease KW556_RS09970 PF00916 Sulfate permease family KW556_RS09970 PF01740 STAS domain KW556_RS09980 PF02132 RecR protein KW556_RS09980 PF13662 Toprim domain KW556_RS09985 PF00183 Hsp90 protein KW556_RS09985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS09990 PF00005 ABC transporter KW556_RS09995 PF00005 ABC transporter KW556_RS09995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KW556_RS10000 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS10000 PF12911 N-terminal TM domain of oligopeptide transport permease C KW556_RS10005 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS10010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KW556_RS10015 PF02954 Bacterial regulatory protein, Fis family KW556_RS10015 PF00158 Sigma-54 interaction domain KW556_RS10020 PF04012 PspA/IM30 family KW556_RS10025 PF06667 Phage shock protein B KW556_RS10035 PF04317 YcjX-like family, DUF463 KW556_RS10040 PF05128 Domain of unknown function (DUF697) KW556_RS10045 PF03466 LysR substrate binding domain KW556_RS10045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS10050 PF13416 Bacterial extracellular solute-binding protein KW556_RS10055 PF08402 TOBE domain KW556_RS10055 PF00005 ABC transporter KW556_RS10060 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS10065 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS10070 PF00171 Aldehyde dehydrogenase family KW556_RS10075 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KW556_RS10085 PF18024 Helix-turn-helix domain KW556_RS10085 PF00158 Sigma-54 interaction domain KW556_RS10095 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS10095 PF17152 Periplasmic sensor domain KW556_RS10100 PF00691 OmpA family KW556_RS10105 PF03741 Integral membrane protein TerC family KW556_RS10115 PF08891 YfcL protein KW556_RS10120 PF00501 AMP-binding enzyme KW556_RS10125 PF01053 Cys/Met metabolism PLP-dependent enzyme KW556_RS10130 PF01609 Transposase DDE domain KW556_RS10140 PF13460 NAD(P)H-binding KW556_RS10145 PF03466 LysR substrate binding domain KW556_RS10145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS10150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS10150 PF03466 LysR substrate binding domain KW556_RS10155 PF07690 Major Facilitator Superfamily KW556_RS10160 PF02678 Pirin KW556_RS10160 PF05726 Pirin C-terminal cupin domain KW556_RS10165 PF00857 Isochorismatase family KW556_RS10170 PF03466 LysR substrate binding domain KW556_RS10170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS10175 PF03466 LysR substrate binding domain KW556_RS10175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS10180 PF01717 Cobalamin-independent synthase, Catalytic domain KW556_RS10180 PF08267 Cobalamin-independent synthase, N-terminal domain KW556_RS10190 PF03466 LysR substrate binding domain KW556_RS10190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS10195 PF00232 Glycosyl hydrolase family 1 KW556_RS10200 PF18381 YcaO cyclodehydratase C-terminal domain KW556_RS10200 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding KW556_RS10205 PF01226 Formate/nitrite transporter KW556_RS10210 PF02901 Pyruvate formate lyase-like KW556_RS10210 PF01228 Glycine radical KW556_RS10215 PF03692 Putative zinc- or iron-chelating domain KW556_RS10230 PF00343 Carbohydrate phosphorylase KW556_RS10240 PF02371 Transposase IS116/IS110/IS902 family KW556_RS10240 PF01548 Transposase KW556_RS10270 PF11143 Protein of unknown function (DUF2919) KW556_RS10275 PF01544 CorA-like Mg2+ transporter protein KW556_RS10285 PF01012 Electron transfer flavoprotein domain KW556_RS10290 PF00766 Electron transfer flavoprotein FAD-binding domain KW556_RS10290 PF01012 Electron transfer flavoprotein domain KW556_RS10295 PF00266 Aminotransferase class-V KW556_RS10300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KW556_RS10305 PF00793 DAHP synthetase I family KW556_RS10310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS10310 PF00672 HAMP domain KW556_RS10315 PF04055 Radical SAM superfamily KW556_RS10320 PF00270 DEAD/DEAH box helicase KW556_RS10320 PF00271 Helicase conserved C-terminal domain KW556_RS10325 PF00255 Glutathione peroxidase KW556_RS10335 PF07478 D-ala D-ala ligase C-terminus KW556_RS10335 PF01820 D-ala D-ala ligase N-terminus KW556_RS10340 PF09261 Alpha mannosidase middle domain KW556_RS10340 PF07748 Glycosyl hydrolases family 38 C-terminal domain KW556_RS10340 PF01074 Glycosyl hydrolases family 38 N-terminal domain KW556_RS10345 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KW556_RS10345 PF02378 Phosphotransferase system, EIIC KW556_RS10345 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KW556_RS10350 PF00392 Bacterial regulatory proteins, gntR family KW556_RS10350 PF07702 UTRA domain KW556_RS10355 PF02601 Exonuclease VII, large subunit KW556_RS10355 PF13742 OB-fold nucleic acid binding domain KW556_RS10365 PF00478 IMP dehydrogenase / GMP reductase domain KW556_RS10365 PF00571 CBS domain KW556_RS10370 PF02540 NAD synthase KW556_RS10370 PF00958 GMP synthase C terminal domain KW556_RS10370 PF00117 Glutamine amidotransferase class-I KW556_RS10405 PF03104 DNA polymerase family B, exonuclease domain KW556_RS10405 PF00136 DNA polymerase family B KW556_RS10420 PF01863 Protein of unknown function DUF45 KW556_RS10425 PF05724 Thiopurine S-methyltransferase (TPMT) KW556_RS10430 PF16187 Middle or third domain of peptidase_M16 KW556_RS10430 PF00675 Insulinase (Peptidase family M16) KW556_RS10430 PF05193 Peptidase M16 inactive domain KW556_RS10435 PF00300 Histidine phosphatase superfamily (branch 1) KW556_RS10445 PF00892 EamA-like transporter family KW556_RS10465 PF03606 C4-dicarboxylate anaerobic carrier KW556_RS10480 PF01266 FAD dependent oxidoreductase KW556_RS10480 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KW556_RS10485 PF00109 Beta-ketoacyl synthase, N-terminal domain KW556_RS10485 PF02801 Beta-ketoacyl synthase, C-terminal domain KW556_RS10495 PF06826 Predicted Permease Membrane Region KW556_RS10495 PF02080 TrkA-C domain KW556_RS10510 PF02151 UvrB/uvrC motif KW556_RS10510 PF04851 Type III restriction enzyme, res subunit KW556_RS10510 PF00271 Helicase conserved C-terminal domain KW556_RS10510 PF12344 Ultra-violet resistance protein B KW556_RS10510 PF17757 UvrB interaction domain KW556_RS10520 PF09335 SNARE associated Golgi protein KW556_RS10525 PF02600 Disulfide bond formation protein DsbB KW556_RS10530 PF06450 Bacterial Na+/H+ antiporter B (NhaB) KW556_RS10535 PF07840 FadR C-terminal domain KW556_RS10535 PF00392 Bacterial regulatory proteins, gntR family KW556_RS10545 PF07152 YaeQ protein KW556_RS10555 PF01381 Helix-turn-helix KW556_RS10555 PF00717 Peptidase S24-like KW556_RS10690 PF08461 Ribonuclease R winged-helix domain KW556_RS10695 PF11985 Protein of unknown function (DUF3486) KW556_RS10700 PF03237 Terminase-like family KW556_RS10705 PF06074 Protein of unknown function (DUF935) KW556_RS10775 PF10124 Mu-like prophage major head subunit gpT KW556_RS10780 PF10123 Mu-like prophage I protein KW556_RS10860 PF13188 PAS domain KW556_RS10860 PF00158 Sigma-54 interaction domain KW556_RS10860 PF02954 Bacterial regulatory protein, Fis family KW556_RS10880 PF01554 MatE KW556_RS10885 PF06786 Uncharacterised protein family (UPF0253) KW556_RS10895 PF00677 Lumazine binding domain KW556_RS10905 PF13419 Haloacid dehalogenase-like hydrolase KW556_RS10910 PF02222 ATP-grasp domain KW556_RS10910 PF01370 NAD dependent epimerase/dehydratase family KW556_RS10915 PF00892 EamA-like transporter family KW556_RS10920 PF02525 Flavodoxin-like fold KW556_RS10945 PF13509 S1 domain KW556_RS10945 PF17783 CvfB-like winged helix domain KW556_RS10955 PF04269 Protein of unknown function, DUF440 KW556_RS10965 PF00912 Transglycosylase KW556_RS10970 PF04269 Protein of unknown function, DUF440 KW556_RS10975 PF03776 Septum formation topological specificity factor MinE KW556_RS10980 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KW556_RS10985 PF03775 Septum formation inhibitor MinC, C-terminal domain KW556_RS10985 PF05209 Septum formation inhibitor MinC, N-terminal domain KW556_RS10990 PF05166 YcgL domain KW556_RS10995 PF03315 Serine dehydratase beta chain KW556_RS10995 PF03313 Serine dehydratase alpha chain KW556_RS11000 PF03313 Serine dehydratase alpha chain KW556_RS11000 PF03315 Serine dehydratase beta chain KW556_RS11005 PF06865 Pyrimidine/purine nucleoside phosphorylase KW556_RS11010 PF00375 Sodium:dicarboxylate symporter family KW556_RS11015 PF00365 Phosphofructokinase KW556_RS11020 PF00121 Triosephosphate isomerase KW556_RS11025 PF02698 DUF218 domain KW556_RS11030 PF13847 Methyltransferase domain KW556_RS11035 PF17192 MukF middle domain KW556_RS11035 PF17193 MukF C-terminal domain KW556_RS11035 PF03882 MukF winged-helix domain KW556_RS11040 PF04288 MukE-like family KW556_RS11045 PF04310 MukB N-terminal KW556_RS11045 PF16330 MukB hinge domain KW556_RS11050 PF03330 Lytic transglycolase KW556_RS11065 PF01966 HD domain KW556_RS11070 PF01368 DHH family KW556_RS11070 PF00571 CBS domain KW556_RS11070 PF01743 Poly A polymerase head domain KW556_RS11070 PF02272 DHHA1 domain KW556_RS11075 PF04408 Helicase associated domain (HA2) KW556_RS11075 PF00271 Helicase conserved C-terminal domain KW556_RS11075 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KW556_RS11075 PF11898 Domain of unknown function (DUF3418) KW556_RS11075 PF00270 DEAD/DEAH box helicase KW556_RS11085 PF01386 Ribosomal L25p family KW556_RS11090 PF09278 MerR, DNA binding KW556_RS11090 PF00376 MerR family regulatory protein KW556_RS11095 PF02803 Thiolase, C-terminal domain KW556_RS11095 PF00108 Thiolase, N-terminal domain KW556_RS11100 PF00563 EAL domain KW556_RS11100 PF08668 HDOD domain KW556_RS11105 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KW556_RS11110 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KW556_RS11120 PF04542 Sigma-70 region 2 KW556_RS11120 PF08281 Sigma-70, region 4 KW556_RS11130 PF13519 von Willebrand factor type A domain KW556_RS11145 PF01882 Protein of unknown function DUF58 KW556_RS11150 PF07726 ATPase family associated with various cellular activities (AAA) KW556_RS11150 PF17863 AAA lid domain KW556_RS11155 PF02803 Thiolase, C-terminal domain KW556_RS11155 PF00108 Thiolase, N-terminal domain KW556_RS11160 PF00378 Enoyl-CoA hydratase/isomerase KW556_RS11160 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KW556_RS11160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KW556_RS11165 PF04293 SpoVR like protein KW556_RS11170 PF04285 Protein of unknown function (DUF444) KW556_RS11175 PF06798 PrkA serine protein kinase C-terminal domain KW556_RS11175 PF08298 PrkA AAA domain KW556_RS11180 PF00570 HRDC domain KW556_RS11180 PF09382 RQC domain KW556_RS11180 PF16124 RecQ zinc-binding KW556_RS11180 PF00271 Helicase conserved C-terminal domain KW556_RS11180 PF00270 DEAD/DEAH box helicase KW556_RS11185 PF00375 Sodium:dicarboxylate symporter family KW556_RS11190 PF03222 Tryptophan/tyrosine permease family KW556_RS11195 PF00293 NUDIX domain KW556_RS11200 PF00425 chorismate binding enzyme KW556_RS11200 PF04715 Anthranilate synthase component I, N terminal region KW556_RS11215 PF03831 PhnA domain KW556_RS11215 PF08274 PhnA Zinc-Ribbon KW556_RS11225 PF08329 Chitinase A, N-terminal domain KW556_RS11225 PF00704 Glycosyl hydrolases family 18 KW556_RS11230 PF04828 Glutathione-dependent formaldehyde-activating enzyme KW556_RS11235 PF00300 Histidine phosphatase superfamily (branch 1) KW556_RS11240 PF08448 PAS fold KW556_RS11240 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS11245 PF01713 Smr domain KW556_RS11250 PF05175 Methyltransferase small domain KW556_RS11255 PF01264 Chorismate synthase KW556_RS11265 PF00270 DEAD/DEAH box helicase KW556_RS11265 PF00271 Helicase conserved C-terminal domain KW556_RS11285 PF01588 Putative tRNA binding domain KW556_RS11285 PF08264 Anticodon-binding domain of tRNA KW556_RS11285 PF09334 tRNA synthetases class I (M) KW556_RS11290 PF10609 NUBPL iron-transfer P-loop NTPase KW556_RS11295 PF00485 Phosphoribulokinase / Uridine kinase family KW556_RS11300 PF00692 dUTPase KW556_RS11305 PF01384 Phosphate transporter family KW556_RS11325 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KW556_RS11325 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KW556_RS11330 PF00291 Pyridoxal-phosphate dependent enzyme KW556_RS11335 PF07687 Peptidase dimerisation domain KW556_RS11335 PF01546 Peptidase family M20/M25/M40 KW556_RS11340 PF01979 Amidohydrolase family KW556_RS11345 PF00696 Amino acid kinase family KW556_RS11350 PF07690 Major Facilitator Superfamily KW556_RS11355 PF00005 ABC transporter KW556_RS11360 PF01032 FecCD transport family KW556_RS11365 PF01497 Periplasmic binding protein KW556_RS11370 PF00892 EamA-like transporter family KW556_RS11375 PF01699 Sodium/calcium exchanger protein KW556_RS11380 PF13478 XdhC Rossmann domain KW556_RS11380 PF02625 XdhC and CoxI family KW556_RS11390 PF12804 MobA-like NTP transferase domain KW556_RS11395 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KW556_RS11395 PF07992 Pyridine nucleotide-disulphide oxidoreductase KW556_RS11400 PF01979 Amidohydrolase family KW556_RS11405 PF00941 FAD binding domain in molybdopterin dehydrogenase KW556_RS11410 PF01799 [2Fe-2S] binding domain KW556_RS11410 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KW556_RS11410 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KW556_RS11415 PF00860 Permease family KW556_RS11420 PF01979 Amidohydrolase family KW556_RS11425 PF00860 Permease family KW556_RS11430 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KW556_RS11430 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KW556_RS11435 PF00941 FAD binding domain in molybdopterin dehydrogenase KW556_RS11435 PF03450 CO dehydrogenase flavoprotein C-terminal domain KW556_RS11440 PF00111 2Fe-2S iron-sulfur cluster binding domain KW556_RS11440 PF01799 [2Fe-2S] binding domain KW556_RS11445 PF05433 Glycine zipper 2TM domain KW556_RS11455 PF00501 AMP-binding enzyme KW556_RS11455 PF13193 AMP-binding enzyme C-terminal domain KW556_RS11460 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS11460 PF08448 PAS fold KW556_RS11480 PF01502 Phosphoribosyl-AMP cyclohydrolase KW556_RS11480 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KW556_RS11485 PF00977 Histidine biosynthesis protein KW556_RS11490 PF00977 Histidine biosynthesis protein KW556_RS11495 PF00117 Glutamine amidotransferase class-I KW556_RS11500 PF00475 Imidazoleglycerol-phosphate dehydratase KW556_RS11500 PF08645 Polynucleotide kinase 3 phosphatase KW556_RS11505 PF00155 Aminotransferase class I and II KW556_RS11510 PF00815 Histidinol dehydrogenase KW556_RS11515 PF08029 HisG, C-terminal domain KW556_RS11515 PF01634 ATP phosphoribosyltransferase KW556_RS11525 PF13307 Helicase C-terminal domain KW556_RS11525 PF04851 Type III restriction enzyme, res subunit KW556_RS11530 PF00814 Glycoprotease family KW556_RS11540 PF12697 Alpha/beta hydrolase family KW556_RS11545 PF00501 AMP-binding enzyme KW556_RS11545 PF13193 AMP-binding enzyme C-terminal domain KW556_RS11550 PF01612 3'-5' exonuclease KW556_RS11550 PF00570 HRDC domain KW556_RS11555 PF00753 Metallo-beta-lactamase superfamily KW556_RS11565 PF00586 AIR synthase related protein, N-terminal domain KW556_RS11565 PF02769 AIR synthase related protein, C-terminal domain KW556_RS11580 PF17785 PUA-like domain KW556_RS11580 PF10672 S-adenosylmethionine-dependent methyltransferase KW556_RS11585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS11585 PF00672 HAMP domain KW556_RS11585 PF12729 Four helix bundle sensory module for signal transduction KW556_RS11590 PF00708 Acylphosphatase KW556_RS11600 PF01609 Transposase DDE domain KW556_RS11600 PF13006 Insertion element 4 transposase N-terminal KW556_RS11605 PF00575 S1 RNA binding domain KW556_RS11605 PF10150 Ribonuclease E/G family KW556_RS11605 PF12111 Polyribonucleotide phosphorylase C terminal KW556_RS11610 PF01479 S4 domain KW556_RS11610 PF00849 RNA pseudouridylate synthase KW556_RS11615 PF13419 Haloacid dehalogenase-like hydrolase KW556_RS11620 PF02545 Maf-like protein KW556_RS11625 PF02620 Large ribosomal RNA subunit accumulation protein YceD KW556_RS11630 PF01783 Ribosomal L32p protein family KW556_RS11635 PF02504 Fatty acid synthesis protein KW556_RS11640 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KW556_RS11640 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KW556_RS11645 PF00698 Acyl transferase domain KW556_RS11655 PF00550 Phosphopantetheine attachment site KW556_RS11660 PF00109 Beta-ketoacyl synthase, N-terminal domain KW556_RS11660 PF02801 Beta-ketoacyl synthase, C-terminal domain KW556_RS11665 PF01063 Amino-transferase class IV KW556_RS11670 PF02618 YceG-like family KW556_RS11675 PF02223 Thymidylate kinase KW556_RS11680 PF09115 DNA polymerase III, delta subunit, C terminal KW556_RS11685 PF01026 TatD related DNase KW556_RS11690 PF00589 Phage integrase family KW556_RS11700 PF01526 Tn3 transposase DDE domain KW556_RS11700 PF13700 Domain of unknown function (DUF4158) KW556_RS11705 PF02796 Helix-turn-helix domain of resolvase KW556_RS11705 PF00239 Resolvase, N terminal domain KW556_RS11710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS11710 PF08447 PAS fold KW556_RS11720 PF01189 16S rRNA methyltransferase RsmB/F KW556_RS11720 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF KW556_RS11720 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF KW556_RS11725 PF02470 MlaD protein KW556_RS11730 PF04403 Paraquat-inducible protein A KW556_RS11745 PF00285 Citrate synthase, C-terminal domain KW556_RS11750 PF03972 MmgE/PrpD family KW556_RS11765 PF01609 Transposase DDE domain KW556_RS11770 PF01590 GAF domain KW556_RS11770 PF02954 Bacterial regulatory protein, Fis family KW556_RS11770 PF00158 Sigma-54 interaction domain KW556_RS11775 PF02634 FdhD/NarQ family KW556_RS11780 PF01118 Semialdehyde dehydrogenase, NAD binding domain KW556_RS11780 PF02774 Semialdehyde dehydrogenase, dimerisation domain KW556_RS11785 PF01266 FAD dependent oxidoreductase KW556_RS11790 PF04244 Deoxyribodipyrimidine photo-lyase-related protein KW556_RS11800 PF01212 Beta-eliminating lyase KW556_RS11805 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KW556_RS11805 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region KW556_RS11810 PF04172 LrgB-like family KW556_RS11815 PF03788 LrgA family KW556_RS11830 PF08411 Exonuclease C-terminal KW556_RS11830 PF00929 Exonuclease KW556_RS11835 PF14502 Helix-turn-helix domain KW556_RS11835 PF14503 YhfZ C-terminal domain KW556_RS11845 PF02126 Phosphotriesterase family KW556_RS11850 PF10941 Protein of unknown function DUF2620 KW556_RS11855 PF10797 Protein of unknown function KW556_RS11860 PF01168 Alanine racemase, N-terminal domain KW556_RS11875 PF01676 Metalloenzyme superfamily KW556_RS11890 PF03222 Tryptophan/tyrosine permease family KW556_RS11895 PF00356 Bacterial regulatory proteins, lacI family KW556_RS11895 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KW556_RS11900 PF00381 PTS HPr component phosphorylation site KW556_RS11900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KW556_RS11905 PF00294 pfkB family carbohydrate kinase KW556_RS11910 PF02378 Phosphotransferase system, EIIC KW556_RS11910 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KW556_RS11915 PF06945 Protein of unknown function (DUF1289) KW556_RS11920 PF03562 MltA specific insert domain KW556_RS11920 PF06725 3D domain KW556_RS11925 PF00111 2Fe-2S iron-sulfur cluster binding domain KW556_RS11930 PF00268 Ribonucleotide reductase, small chain KW556_RS11935 PF03477 ATP cone domain KW556_RS11935 PF02867 Ribonucleotide reductase, barrel domain KW556_RS11935 PF00317 Ribonucleotide reductase, all-alpha domain KW556_RS11940 PF13419 Haloacid dehalogenase-like hydrolase KW556_RS11950 PF03989 DNA gyrase C-terminal domain, beta-propeller KW556_RS11950 PF00521 DNA gyrase/topoisomerase IV, subunit A KW556_RS11955 PF00128 Alpha amylase, catalytic domain KW556_RS11965 PF04055 Radical SAM superfamily KW556_RS11975 PF02824 TGS domain KW556_RS11975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KW556_RS11975 PF03129 Anticodon binding domain KW556_RS11975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KW556_RS11980 PF00707 Translation initiation factor IF-3, C-terminal domain KW556_RS11980 PF05198 Translation initiation factor IF-3, N-terminal domain KW556_RS11985 PF01632 Ribosomal protein L35 KW556_RS11990 PF00453 Ribosomal protein L20 KW556_RS11995 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KW556_RS11995 PF01409 tRNA synthetases class II core domain (F) KW556_RS12000 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KW556_RS12000 PF01588 Putative tRNA binding domain KW556_RS12000 PF03483 B3/4 domain KW556_RS12000 PF03147 Ferredoxin-fold anticodon binding domain KW556_RS12000 PF03484 tRNA synthetase B5 domain KW556_RS12005 PF00216 Bacterial DNA-binding protein KW556_RS12025 PF02146 Sir2 family KW556_RS12035 PF00563 EAL domain KW556_RS12035 PF03707 Bacterial signalling protein N terminal repeat KW556_RS12035 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS12040 PF00356 Bacterial regulatory proteins, lacI family KW556_RS12045 PF00294 pfkB family carbohydrate kinase KW556_RS12050 PF13407 Periplasmic binding protein domain KW556_RS12055 PF02653 Branched-chain amino acid transport system / permease component KW556_RS12060 PF00005 ABC transporter KW556_RS12065 PF05025 RbsD / FucU transport protein family KW556_RS12070 PF02798 Glutathione S-transferase, N-terminal domain KW556_RS12070 PF00043 Glutathione S-transferase, C-terminal domain KW556_RS12085 PF13416 Bacterial extracellular solute-binding protein KW556_RS12090 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS12095 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS12100 PF00005 ABC transporter KW556_RS12100 PF08402 TOBE domain KW556_RS12115 PF01171 PP-loop family KW556_RS12120 PF00582 Universal stress protein family KW556_RS12125 PF13545 Crp-like helix-turn-helix domain KW556_RS12125 PF00027 Cyclic nucleotide-binding domain KW556_RS12140 PF00403 Heavy-metal-associated domain KW556_RS12150 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KW556_RS12150 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP KW556_RS12165 PF00115 Cytochrome C and Quinol oxidase polypeptide I KW556_RS12175 PF13185 GAF domain KW556_RS12180 PF04352 ProQ/FINO family KW556_RS12180 PF17516 ProQ C-terminal domain KW556_RS12185 PF00595 PDZ domain KW556_RS12185 PF03572 Peptidase family S41 KW556_RS12185 PF11818 C-terminal domain of tail specific protease (DUF3340) KW556_RS12185 PF17804 Tail specific protease N-terminal domain KW556_RS12190 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KW556_RS12190 PF11940 Domain of unknown function (DUF3458) Ig-like fold KW556_RS12190 PF01433 Peptidase family M1 domain KW556_RS12200 PF05088 Bacterial NAD-glutamate dehydrogenase KW556_RS12205 PF01180 Dihydroorotate dehydrogenase KW556_RS12210 PF07126 Cell-division protein ZapC KW556_RS12220 PF01197 Ribosomal protein L31 KW556_RS12225 PF00444 Ribosomal protein L36 KW556_RS12230 PF01170 Putative RNA methylase family UPF0020 KW556_RS12230 PF10672 S-adenosylmethionine-dependent methyltransferase KW556_RS12230 PF02926 THUMP domain KW556_RS12240 PF00005 ABC transporter KW556_RS12240 PF16326 ABC transporter C-terminal domain KW556_RS12240 PF12848 ABC transporter KW556_RS12245 PF04957 Ribosome modulation factor KW556_RS12250 PF07977 FabA-like domain KW556_RS12255 PF13654 AAA domain KW556_RS12255 PF05362 Lon protease (S16) C-terminal proteolytic domain KW556_RS12280 PF07130 YebG protein KW556_RS12285 PF01674 Lipase (class 2) KW556_RS12320 PF01609 Transposase DDE domain KW556_RS12330 PF07238 PilZ domain KW556_RS12330 PF00535 Glycosyl transferase family 2 KW556_RS12330 PF03552 Cellulose synthase KW556_RS12335 PF02397 Bacterial sugar transferase KW556_RS12340 PF00534 Glycosyl transferases group 1 KW556_RS12345 PF00211 Adenylate and Guanylate cyclase catalytic domain KW556_RS12345 PF00072 Response regulator receiver domain KW556_RS12375 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS12375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS12375 PF00072 Response regulator receiver domain KW556_RS12375 PF09308 LuxQ, periplasmic KW556_RS12380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS12380 PF03466 LysR substrate binding domain KW556_RS12385 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KW556_RS12395 PF01609 Transposase DDE domain KW556_RS12400 PF07690 Major Facilitator Superfamily KW556_RS12420 PF14461 Prokaryotic E2 family B KW556_RS12420 PF00899 ThiF family KW556_RS12460 PF12161 HsdM N-terminal domain KW556_RS12460 PF02384 N-6 DNA Methylase KW556_RS12470 PF11867 Domain of unknown function (DUF3387) KW556_RS12470 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KW556_RS12470 PF18766 SWI2/SNF2 ATPase KW556_RS12505 PF09615 CRISPR-associated protein (Cas_Csy3) KW556_RS12530 PF13401 AAA domain KW556_RS12530 PF01471 Putative peptidoglycan binding domain KW556_RS12550 PF01925 Sulfite exporter TauE/SafE KW556_RS12555 PF13520 Amino acid permease KW556_RS12565 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KW556_RS12565 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KW556_RS12570 PF00378 Enoyl-CoA hydratase/isomerase KW556_RS12575 PF00378 Enoyl-CoA hydratase/isomerase KW556_RS12580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KW556_RS12580 PF02770 Acyl-CoA dehydrogenase, middle domain KW556_RS12580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KW556_RS12585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KW556_RS12585 PF02770 Acyl-CoA dehydrogenase, middle domain KW556_RS12585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KW556_RS12590 PF01039 Carboxyl transferase domain KW556_RS12595 PF00378 Enoyl-CoA hydratase/isomerase KW556_RS12600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KW556_RS12600 PF02785 Biotin carboxylase C-terminal domain KW556_RS12600 PF00289 Biotin carboxylase, N-terminal domain KW556_RS12600 PF00364 Biotin-requiring enzyme KW556_RS12605 PF00682 HMGL-like KW556_RS12610 PF00376 MerR family regulatory protein KW556_RS12610 PF09278 MerR, DNA binding KW556_RS12625 PF01184 GPR1/FUN34/yaaH family KW556_RS12630 PF06167 Glucose-regulated metallo-peptidase M90 KW556_RS12635 PF00583 Acetyltransferase (GNAT) family KW556_RS12640 PF01235 Sodium:alanine symporter family KW556_RS12660 PF01609 Transposase DDE domain KW556_RS12660 PF05598 Transposase domain (DUF772) KW556_RS12680 PF00378 Enoyl-CoA hydratase/isomerase KW556_RS12695 PF04341 Protein of unknown function, DUF485 KW556_RS12700 PF00474 Sodium:solute symporter family KW556_RS12705 PF00005 ABC transporter KW556_RS12705 PF12848 ABC transporter KW556_RS12710 PF13145 PPIC-type PPIASE domain KW556_RS12715 PF00216 Bacterial DNA-binding protein KW556_RS12720 PF00004 ATPase family associated with various cellular activities (AAA) KW556_RS12720 PF05362 Lon protease (S16) C-terminal proteolytic domain KW556_RS12720 PF02190 ATP-dependent protease La (LON) substrate-binding domain KW556_RS12725 PF07724 AAA domain (Cdc48 subfamily) KW556_RS12725 PF10431 C-terminal, D2-small domain, of ClpB protein KW556_RS12725 PF06689 ClpX C4-type zinc finger KW556_RS12730 PF00574 Clp protease KW556_RS12735 PF05698 Bacterial trigger factor protein (TF) C-terminus KW556_RS12735 PF05697 Bacterial trigger factor protein (TF) KW556_RS12735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KW556_RS12750 PF02687 FtsX-like permease family KW556_RS12750 PF12704 MacB-like periplasmic core domain KW556_RS12755 PF00005 ABC transporter KW556_RS12760 PF02687 FtsX-like permease family KW556_RS12760 PF12704 MacB-like periplasmic core domain KW556_RS12770 PF02559 CarD-like/TRCF domain KW556_RS12770 PF00270 DEAD/DEAH box helicase KW556_RS12770 PF00271 Helicase conserved C-terminal domain KW556_RS12770 PF03461 TRCF domain KW556_RS12770 PF17757 UvrB interaction domain KW556_RS12775 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KW556_RS12780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KW556_RS12795 PF03279 Bacterial lipid A biosynthesis acyltransferase KW556_RS12800 PF03279 Bacterial lipid A biosynthesis acyltransferase KW556_RS12810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS12810 PF03466 LysR substrate binding domain KW556_RS12815 PF01261 Xylose isomerase-like TIM barrel KW556_RS12820 PF02575 YbaB/EbfC DNA-binding family KW556_RS12825 PF12170 DNA polymerase III tau subunit V interacting with alpha KW556_RS12825 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KW556_RS12825 PF12169 DNA polymerase III subunits gamma and tau domain III KW556_RS12830 PF00156 Phosphoribosyl transferase domain KW556_RS12835 PF04304 Protein of unknown function (DUF454) KW556_RS12840 PF01207 Dihydrouridine synthase (Dus) KW556_RS12855 PF13419 Haloacid dehalogenase-like hydrolase KW556_RS12860 PF00883 Cytosol aminopeptidase family, catalytic domain KW556_RS12860 PF02789 Cytosol aminopeptidase family, N-terminal domain KW556_RS12885 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KW556_RS12885 PF00128 Alpha amylase, catalytic domain KW556_RS12895 PF11398 Protein of unknown function (DUF2813) KW556_RS12900 PF14525 AraC-binding-like domain KW556_RS12900 PF12833 Helix-turn-helix domain KW556_RS12910 PF03466 LysR substrate binding domain KW556_RS12910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS12915 PF01925 Sulfite exporter TauE/SafE KW556_RS12920 PF03942 DTW domain KW556_RS12925 PF00480 ROK family KW556_RS12925 PF01047 MarR family KW556_RS12930 PF17200 Single Cache domain 2 KW556_RS12930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS12930 PF00672 HAMP domain KW556_RS12935 PF02810 SEC-C motif KW556_RS12940 PF01266 FAD dependent oxidoreductase KW556_RS12940 PF04324 BFD-like [2Fe-2S] binding domain KW556_RS12945 PF00890 FAD binding domain KW556_RS12950 PF02754 Cysteine-rich domain KW556_RS12950 PF13183 4Fe-4S dicluster domain KW556_RS12960 PF02335 Cytochrome c552 KW556_RS12965 PF13435 Cytochrome c554 and c-prime KW556_RS12965 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) KW556_RS12970 PF00037 4Fe-4S binding domain KW556_RS12970 PF13247 4Fe-4S dicluster domain KW556_RS12975 PF03916 Polysulphide reductase, NrfD KW556_RS12980 PF01578 Cytochrome C assembly protein KW556_RS12980 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KW556_RS12985 PF08534 Redoxin KW556_RS12990 PF03918 Cytochrome C biogenesis protein KW556_RS13015 PF00202 Aminotransferase class-III KW556_RS13020 PF00266 Aminotransferase class-V KW556_RS13025 PF07702 UTRA domain KW556_RS13025 PF00392 Bacterial regulatory proteins, gntR family KW556_RS13035 PF00005 ABC transporter KW556_RS13040 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS13045 PF01266 FAD dependent oxidoreductase KW556_RS13055 PF02629 CoA binding domain KW556_RS13055 PF00549 CoA-ligase KW556_RS13060 PF08442 ATP-grasp domain KW556_RS13060 PF00549 CoA-ligase KW556_RS13065 PF00364 Biotin-requiring enzyme KW556_RS13065 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KW556_RS13065 PF02817 e3 binding domain KW556_RS13070 PF16870 2-oxoglutarate dehydrogenase C-terminal KW556_RS13070 PF02779 Transketolase, pyrimidine binding domain KW556_RS13070 PF00676 Dehydrogenase E1 component KW556_RS13070 PF16078 2-oxoglutarate dehydrogenase N-terminus KW556_RS13075 PF13085 2Fe-2S iron-sulfur cluster binding domain KW556_RS13080 PF02910 Fumarate reductase flavoprotein C-term KW556_RS13080 PF00890 FAD binding domain KW556_RS13085 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KW556_RS13090 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KW556_RS13100 PF00285 Citrate synthase, C-terminal domain KW556_RS13110 PF13673 Acetyltransferase (GNAT) domain KW556_RS13120 PF01928 CYTH domain KW556_RS13135 PF00465 Iron-containing alcohol dehydrogenase KW556_RS13140 PF08543 Phosphomethylpyrimidine kinase KW556_RS13165 PF00664 ABC transporter transmembrane region KW556_RS13165 PF00005 ABC transporter KW556_RS13170 PF00005 ABC transporter KW556_RS13170 PF00664 ABC transporter transmembrane region KW556_RS13175 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KW556_RS13175 PF01627 Hpt domain KW556_RS13175 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS13175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS13175 PF00672 HAMP domain KW556_RS13175 PF00072 Response regulator receiver domain KW556_RS13180 PF00085 Thioredoxin KW556_RS13185 PF00939 Sodium:sulfate symporter transmembrane region KW556_RS13205 PF03239 Iron permease FTR1 family KW556_RS13210 PF01593 Flavin containing amine oxidoreductase KW556_RS13235 PF07690 Major Facilitator Superfamily KW556_RS13240 PF03600 Citrate transporter KW556_RS13250 PF00005 ABC transporter KW556_RS13255 PF12704 MacB-like periplasmic core domain KW556_RS13255 PF02687 FtsX-like permease family KW556_RS13275 PF00561 alpha/beta hydrolase fold KW556_RS13295 PF01625 Peptide methionine sulfoxide reductase KW556_RS13300 PF00696 Amino acid kinase family KW556_RS13300 PF00583 Acetyltransferase (GNAT) family KW556_RS13305 PF00696 Amino acid kinase family KW556_RS13305 PF01842 ACT domain KW556_RS13315 PF00884 Sulfatase KW556_RS13320 PF17676 LD-carboxypeptidase C-terminal domain KW556_RS13320 PF02016 LD-carboxypeptidase N-terminal domain KW556_RS13325 PF01734 Patatin-like phospholipase KW556_RS13330 PF17179 4Fe-4S dicluster domain KW556_RS13335 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KW556_RS13335 PF00175 Oxidoreductase NAD-binding domain KW556_RS13340 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KW556_RS13340 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KW556_RS13340 PF13187 4Fe-4S dicluster domain KW556_RS13345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KW556_RS13345 PF10414 Sirohaem synthase dimerisation region KW556_RS13345 PF14824 Sirohaem biosynthesis protein central KW556_RS13355 PF01906 Putative heavy-metal-binding KW556_RS13360 PF05036 Sporulation related domain KW556_RS13365 PF02875 Mur ligase family, glutamate ligase domain KW556_RS13365 PF08245 Mur ligase middle domain KW556_RS13370 PF01039 Carboxyl transferase domain KW556_RS13370 PF17848 Acetyl-coA carboxylase zinc finger domain KW556_RS13375 PF01416 tRNA pseudouridine synthase KW556_RS13385 PF01118 Semialdehyde dehydrogenase, NAD binding domain KW556_RS13385 PF02774 Semialdehyde dehydrogenase, dimerisation domain KW556_RS13390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KW556_RS13390 PF11890 Domain of unknown function (DUF3410) KW556_RS13390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KW556_RS13395 PF01569 PAP2 superfamily KW556_RS13400 PF00929 Exonuclease KW556_RS13405 PF13726 Na+-H+ antiporter family KW556_RS13405 PF03553 Na+/H+ antiporter family KW556_RS13410 PF13188 PAS domain KW556_RS13410 PF00563 EAL domain KW556_RS13410 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS13410 PF03707 Bacterial signalling protein N terminal repeat KW556_RS13420 PF03880 DbpA RNA binding domain KW556_RS13420 PF00271 Helicase conserved C-terminal domain KW556_RS13420 PF00270 DEAD/DEAH box helicase KW556_RS13425 PF03061 Thioesterase superfamily KW556_RS13435 PF02913 FAD linked oxidases, C-terminal domain KW556_RS13435 PF01565 FAD binding domain KW556_RS13435 PF13183 4Fe-4S dicluster domain KW556_RS13445 PF03471 Transporter associated domain KW556_RS13445 PF03741 Integral membrane protein TerC family KW556_RS13450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KW556_RS13455 PF00107 Zinc-binding dehydrogenase KW556_RS13455 PF08240 Alcohol dehydrogenase GroES-like domain KW556_RS13460 PF00962 Adenosine/AMP deaminase KW556_RS13465 PF13344 Haloacid dehalogenase-like hydrolase KW556_RS13470 PF02254 TrkA-N domain KW556_RS13470 PF00999 Sodium/hydrogen exchanger family KW556_RS13480 PF00733 Asparagine synthase KW556_RS13480 PF13537 Glutamine amidotransferase domain KW556_RS13495 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KW556_RS13500 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KW556_RS13505 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KW556_RS13505 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KW556_RS13515 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KW556_RS13515 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KW556_RS13520 PF00384 Molybdopterin oxidoreductase KW556_RS13520 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KW556_RS13520 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KW556_RS13525 PF00146 NADH dehydrogenase KW556_RS13530 PF12838 4Fe-4S dicluster domain KW556_RS13535 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KW556_RS13540 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KW556_RS13545 PF00361 Proton-conducting membrane transporter KW556_RS13545 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KW556_RS13550 PF00361 Proton-conducting membrane transporter KW556_RS13555 PF00361 Proton-conducting membrane transporter KW556_RS13565 PF00072 Response regulator receiver domain KW556_RS13570 PF01966 HD domain KW556_RS13575 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KW556_RS13575 PF02769 AIR synthase related protein, C-terminal domain KW556_RS13575 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KW556_RS13580 PF00497 Bacterial extracellular solute-binding proteins, family 3 KW556_RS13580 PF01464 Transglycosylase SLT domain KW556_RS13585 PF07191 zinc-ribbons KW556_RS13590 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KW556_RS13590 PF01926 50S ribosome-binding GTPase KW556_RS13595 PF13360 PQQ-like domain KW556_RS13600 PF09976 Tetratricopeptide repeat-like domain KW556_RS13605 PF03129 Anticodon binding domain KW556_RS13605 PF13393 Histidyl-tRNA synthetase KW556_RS13610 PF04551 GcpE protein KW556_RS13615 PF13464 Domain of unknown function (DUF4115) KW556_RS13625 PF04055 Radical SAM superfamily KW556_RS13630 PF00334 Nucleoside diphosphate kinase KW556_RS13635 PF00883 Cytosol aminopeptidase family, catalytic domain KW556_RS13635 PF12404 Peptidase KW556_RS13640 PF12404 Peptidase KW556_RS13640 PF00883 Cytosol aminopeptidase family, catalytic domain KW556_RS13645 PF01609 Transposase DDE domain KW556_RS13650 PF00111 2Fe-2S iron-sulfur cluster binding domain KW556_RS13655 PF00012 Hsp70 protein KW556_RS13660 PF07743 HSCB C-terminal oligomerisation domain KW556_RS13660 PF00226 DnaJ domain KW556_RS13665 PF01521 Iron-sulphur cluster biosynthesis KW556_RS13670 PF01592 NifU-like N terminal domain KW556_RS13675 PF00266 Aminotransferase class-V KW556_RS13680 PF02082 Transcriptional regulator KW556_RS13685 PF00588 SpoU rRNA Methylase family KW556_RS13695 PF02036 SCP-2 sterol transfer family KW556_RS13700 PF01136 Peptidase family U32 KW556_RS13705 PF01136 Peptidase family U32 KW556_RS13710 PF13181 Tetratricopeptide repeat KW556_RS13710 PF07719 Tetratricopeptide repeat KW556_RS13720 PF02355 Protein export membrane protein KW556_RS13720 PF07549 SecD/SecF GG Motif KW556_RS13725 PF02355 Protein export membrane protein KW556_RS13725 PF13721 SecD export protein N-terminal TM region KW556_RS13725 PF07549 SecD/SecF GG Motif KW556_RS13730 PF02699 Preprotein translocase subunit KW556_RS13735 PF01702 Queuine tRNA-ribosyltransferase KW556_RS13740 PF02547 Queuosine biosynthesis protein KW556_RS13745 PF00571 CBS domain KW556_RS13750 PF10417 C-terminal domain of 1-Cys peroxiredoxin KW556_RS13750 PF00578 AhpC/TSA family KW556_RS13755 PF07992 Pyridine nucleotide-disulphide oxidoreductase KW556_RS13755 PF13192 Thioredoxin domain KW556_RS13785 PF01609 Transposase DDE domain KW556_RS13815 PF03412 Peptidase C39 family KW556_RS13815 PF00664 ABC transporter transmembrane region KW556_RS13815 PF00005 ABC transporter KW556_RS13820 PF16199 Radical_SAM C-terminal domain KW556_RS13820 PF04055 Radical SAM superfamily KW556_RS13825 PF01493 GXGXG motif KW556_RS13825 PF01645 Conserved region in glutamate synthase KW556_RS13825 PF04898 Glutamate synthase central domain KW556_RS13825 PF00310 Glutamine amidotransferases class-II KW556_RS13830 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KW556_RS13830 PF07992 Pyridine nucleotide-disulphide oxidoreductase KW556_RS13840 PF00270 DEAD/DEAH box helicase KW556_RS13840 PF00271 Helicase conserved C-terminal domain KW556_RS13855 PF07664 Ferrous iron transport protein B C terminus KW556_RS13855 PF02421 Ferrous iron transport protein B KW556_RS13855 PF07670 Nucleoside recognition KW556_RS13865 PF01253 Translation initiation factor SUI1 KW556_RS13870 PF01169 Uncharacterized protein family UPF0016 KW556_RS13920 PF09190 DALR domain KW556_RS13920 PF01406 tRNA synthetases class I (C) catalytic domain KW556_RS13925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KW556_RS13935 PF01609 Transposase DDE domain KW556_RS13940 PF00149 Calcineurin-like phosphoesterase KW556_RS13950 PF01609 Transposase DDE domain KW556_RS13950 PF05598 Transposase domain (DUF772) KW556_RS14000 PF01066 CDP-alcohol phosphatidyltransferase KW556_RS14005 PF02151 UvrB/uvrC motif KW556_RS14005 PF08459 UvrC Helix-hairpin-helix N-terminal KW556_RS14005 PF01541 GIY-YIG catalytic domain KW556_RS14010 PF00196 Bacterial regulatory proteins, luxR family KW556_RS14010 PF00072 Response regulator receiver domain KW556_RS14015 PF02348 Cytidylyltransferase KW556_RS14020 PF03966 Trm112p-like protein KW556_RS14025 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KW556_RS14030 PF00664 ABC transporter transmembrane region KW556_RS14030 PF00005 ABC transporter KW556_RS14035 PF03772 Competence protein KW556_RS14035 PF00753 Metallo-beta-lactamase superfamily KW556_RS14050 PF00155 Aminotransferase class I and II KW556_RS14060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS14060 PF03466 LysR substrate binding domain KW556_RS14065 PF04219 Protein of unknown function, DUF KW556_RS14070 PF03974 Ecotin KW556_RS14075 PF03009 Glycerophosphoryl diester phosphodiesterase family KW556_RS14080 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KW556_RS14080 PF01266 FAD dependent oxidoreductase KW556_RS14085 PF00455 DeoR C terminal sensor domain KW556_RS14085 PF08220 DeoR-like helix-turn-helix domain KW556_RS14090 PF07690 Major Facilitator Superfamily KW556_RS14095 PF01609 Transposase DDE domain KW556_RS14100 PF00230 Major intrinsic protein KW556_RS14105 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KW556_RS14105 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KW556_RS14110 PF00672 HAMP domain KW556_RS14110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS14110 PF02743 Cache domain KW556_RS14120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS14120 PF03466 LysR substrate binding domain KW556_RS14140 PF00248 Aldo/keto reductase family KW556_RS14150 PF07690 Major Facilitator Superfamily KW556_RS14155 PF02525 Flavodoxin-like fold KW556_RS14170 PF05114 Protein of unknown function (DUF692) KW556_RS14190 PF02322 Cytochrome bd terminal oxidase subunit II KW556_RS14195 PF01654 Cytochrome bd terminal oxidase subunit I KW556_RS14200 PF00155 Aminotransferase class I and II KW556_RS14200 PF00392 Bacterial regulatory proteins, gntR family KW556_RS14210 PF04391 Protein of unknown function (DUF533) KW556_RS14215 PF03061 Thioesterase superfamily KW556_RS14220 PF10689 Protein of unknown function (DUF2496) KW556_RS14225 PF03466 LysR substrate binding domain KW556_RS14225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS14235 PF07690 Major Facilitator Superfamily KW556_RS14240 PF00849 RNA pseudouridylate synthase KW556_RS14240 PF01479 S4 domain KW556_RS14285 PF02508 Rnf-Nqr subunit, membrane protein KW556_RS14290 PF04060 Putative Fe-S cluster KW556_RS14295 PF12838 4Fe-4S dicluster domain KW556_RS14295 PF10531 SLBB domain KW556_RS14295 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KW556_RS14295 PF13375 RnfC Barrel sandwich hybrid domain KW556_RS14300 PF03116 NQR2, RnfD, RnfE family KW556_RS14305 PF04205 FMN-binding domain KW556_RS14310 PF02508 Rnf-Nqr subunit, membrane protein KW556_RS14315 PF10576 Iron-sulfur binding domain of endonuclease III KW556_RS14315 PF00730 HhH-GPD superfamily base excision DNA repair protein KW556_RS14315 PF00633 Helix-hairpin-helix motif KW556_RS14320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KW556_RS14325 PF00691 OmpA family KW556_RS14325 PF18393 MotY N-terminal domain KW556_RS14355 PF00267 Gram-negative porin KW556_RS14360 PF06733 DEAD_2 KW556_RS14360 PF13307 Helicase C-terminal domain KW556_RS14370 PF00850 Histone deacetylase domain KW556_RS14375 PF01926 50S ribosome-binding GTPase KW556_RS14380 PF00245 Alkaline phosphatase KW556_RS14385 PF00245 Alkaline phosphatase KW556_RS14400 PF14760 Rnk N-terminus KW556_RS14400 PF01272 Transcription elongation factor, GreA/GreB, C-term KW556_RS14405 PF00072 Response regulator receiver domain KW556_RS14405 PF00196 Bacterial regulatory proteins, luxR family KW556_RS14410 PF05231 MASE1 KW556_RS14410 PF07730 Histidine kinase KW556_RS14410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS14415 PF07690 Major Facilitator Superfamily KW556_RS14420 PF08448 PAS fold KW556_RS14420 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS14425 PF00497 Bacterial extracellular solute-binding proteins, family 3 KW556_RS14430 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS14445 PF00005 ABC transporter KW556_RS14450 PF01709 Transcriptional regulator KW556_RS14455 PF00152 tRNA synthetases class II (D, K and N) KW556_RS14455 PF01336 OB-fold nucleic acid binding domain KW556_RS14455 PF02938 GAD domain KW556_RS14465 PF01904 Protein of unknown function DUF72 KW556_RS14470 PF13649 Methyltransferase domain KW556_RS14475 PF08003 Protein of unknown function (DUF1698) KW556_RS14495 PF10417 C-terminal domain of 1-Cys peroxiredoxin KW556_RS14495 PF00578 AhpC/TSA family KW556_RS14500 PF03466 LysR substrate binding domain KW556_RS14500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS14505 PF00877 NlpC/P60 family KW556_RS14515 PF03466 LysR substrate binding domain KW556_RS14515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS14520 PF02447 GntP family permease KW556_RS14525 PF00291 Pyridoxal-phosphate dependent enzyme KW556_RS14535 PF00180 Isocitrate/isopropylmalate dehydrogenase KW556_RS14540 PF12833 Helix-turn-helix domain KW556_RS14545 PF01238 Phosphomannose isomerase type I KW556_RS14565 PF05656 Protein of unknown function (DUF805) KW556_RS14575 PF00034 Cytochrome c KW556_RS14575 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KW556_RS14585 PF01156 Inosine-uridine preferring nucleoside hydrolase KW556_RS14595 PF00171 Aldehyde dehydrogenase family KW556_RS14600 PF08359 YsiA-like protein, C-terminal region KW556_RS14600 PF00440 Bacterial regulatory proteins, tetR family KW556_RS14610 PF00465 Iron-containing alcohol dehydrogenase KW556_RS14630 PF01554 MatE KW556_RS14640 PF04325 Protein of unknown function (DUF465) KW556_RS14650 PF00563 EAL domain KW556_RS14650 PF03707 Bacterial signalling protein N terminal repeat KW556_RS14650 PF13188 PAS domain KW556_RS14650 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS14655 PF04337 Protein of unknown function, DUF480 KW556_RS14665 PF00127 Copper binding proteins, plastocyanin/azurin family KW556_RS14670 PF02424 ApbE family KW556_RS14685 PF03372 Endonuclease/Exonuclease/phosphatase family KW556_RS14690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KW556_RS14695 PF00873 AcrB/AcrD/AcrF family KW556_RS14710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KW556_RS14710 PF00529 HlyD membrane-fusion protein of T1SS KW556_RS14715 PF00873 AcrB/AcrD/AcrF family KW556_RS14725 PF01497 Periplasmic binding protein KW556_RS14730 PF00005 ABC transporter KW556_RS14735 PF01032 FecCD transport family KW556_RS14740 PF01032 FecCD transport family KW556_RS14745 PF08021 Siderophore-interacting FAD-binding domain KW556_RS14745 PF04954 Siderophore-interacting protein KW556_RS14750 PF11849 Domain of unknown function (DUF3369) KW556_RS14760 PF00929 Exonuclease KW556_RS14765 PF00075 RNase H KW556_RS14770 PF08241 Methyltransferase domain KW556_RS14775 PF16123 Hydroxyacylglutathione hydrolase C-terminus KW556_RS14775 PF00753 Metallo-beta-lactamase superfamily KW556_RS14780 PF01476 LysM domain KW556_RS14780 PF01464 Transglycosylase SLT domain KW556_RS14785 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KW556_RS14795 PF05472 DNA replication terminus site-binding protein (Ter protein) KW556_RS14800 PF04434 SWIM zinc finger KW556_RS14800 PF00176 SNF2 family N-terminal domain KW556_RS14800 PF00271 Helicase conserved C-terminal domain KW556_RS14805 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS14805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS14805 PF00672 HAMP domain KW556_RS14810 PF00486 Transcriptional regulatory protein, C terminal KW556_RS14810 PF00072 Response regulator receiver domain KW556_RS14815 PF00529 HlyD membrane-fusion protein of T1SS KW556_RS14815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KW556_RS14820 PF00873 AcrB/AcrD/AcrF family KW556_RS14825 PF13356 Arm DNA-binding domain KW556_RS14825 PF00589 Phage integrase family KW556_RS14850 PF05973 Phage derived protein Gp49-like (DUF891) KW556_RS14855 PF01381 Helix-turn-helix KW556_RS14860 PF09588 YqaJ-like viral recombinase domain KW556_RS14905 PF04002 RadC-like JAB domain KW556_RS14950 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A KW556_RS14965 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KW556_RS14965 PF18766 SWI2/SNF2 ATPase KW556_RS14965 PF11867 Domain of unknown function (DUF3387) KW556_RS14975 PF02463 RecF/RecN/SMC N terminal domain KW556_RS14980 PF05598 Transposase domain (DUF772) KW556_RS14980 PF01609 Transposase DDE domain KW556_RS14990 PF02384 N-6 DNA Methylase KW556_RS14990 PF12161 HsdM N-terminal domain KW556_RS15010 PF03734 L,D-transpeptidase catalytic domain KW556_RS15010 PF01476 LysM domain KW556_RS15010 PF17969 L,D-transpeptidase C-terminal domain KW556_RS15030 PF01156 Inosine-uridine preferring nucleoside hydrolase KW556_RS15035 PF00849 RNA pseudouridylate synthase KW556_RS15040 PF01048 Phosphorylase superfamily KW556_RS15045 PF00465 Iron-containing alcohol dehydrogenase KW556_RS15050 PF04355 SmpA / OmlA family KW556_RS15055 PF13460 NAD(P)H-binding KW556_RS15065 PF03099 Biotin/lipoate A/B protein ligase family KW556_RS15065 PF10437 Bacterial lipoate protein ligase C-terminus KW556_RS15070 PF03707 Bacterial signalling protein N terminal repeat KW556_RS15070 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS15070 PF00563 EAL domain KW556_RS15075 PF00005 ABC transporter KW556_RS15075 PF12704 MacB-like periplasmic core domain KW556_RS15075 PF02687 FtsX-like permease family KW556_RS15080 PF02687 FtsX-like permease family KW556_RS15080 PF00005 ABC transporter KW556_RS15080 PF12704 MacB-like periplasmic core domain KW556_RS15085 PF12704 MacB-like periplasmic core domain KW556_RS15085 PF02687 FtsX-like permease family KW556_RS15085 PF00005 ABC transporter KW556_RS15090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KW556_RS15090 PF00529 HlyD membrane-fusion protein of T1SS KW556_RS15095 PF00873 AcrB/AcrD/AcrF family KW556_RS15110 PF04143 Sulphur transport KW556_RS15125 PF07992 Pyridine nucleotide-disulphide oxidoreductase KW556_RS15135 PF02308 MgtC family KW556_RS15140 PF13407 Periplasmic binding protein domain KW556_RS15140 PF00356 Bacterial regulatory proteins, lacI family KW556_RS15145 PF08244 Glycosyl hydrolases family 32 C terminal KW556_RS15145 PF00251 Glycosyl hydrolases family 32 N-terminal domain KW556_RS15150 PF02378 Phosphotransferase system, EIIC KW556_RS15150 PF00367 phosphotransferase system, EIIB KW556_RS15155 PF00294 pfkB family carbohydrate kinase KW556_RS15160 PF11471 Maltoporin periplasmic N-terminal extension KW556_RS15160 PF02264 LamB porin KW556_RS15170 PF01380 SIS domain KW556_RS15170 PF00571 CBS domain KW556_RS15175 PF00455 DeoR C terminal sensor domain KW556_RS15175 PF08220 DeoR-like helix-turn-helix domain KW556_RS15185 PF00106 short chain dehydrogenase KW556_RS15190 PF03829 PTS system glucitol/sorbitol-specific IIA component KW556_RS15195 PF07663 Sorbitol phosphotransferase enzyme II C-terminus KW556_RS15195 PF03612 Sorbitol phosphotransferase enzyme II N-terminus KW556_RS15230 PF18623 TnsE C-terminal domain KW556_RS15235 PF15978 Tn7-like transposition protein D KW556_RS15235 PF06527 TniQ KW556_RS15240 PF13401 AAA domain KW556_RS15240 PF11426 Tn7 transposition regulator TnsC KW556_RS15245 PF00665 Integrase core domain KW556_RS15250 PF08721 TnsA endonuclease C terminal KW556_RS15250 PF08722 TnsA endonuclease N terminal KW556_RS15255 PF00684 DnaJ central domain KW556_RS15255 PF01556 DnaJ C terminal domain KW556_RS15255 PF00226 DnaJ domain KW556_RS15260 PF00012 Hsp70 protein KW556_RS15265 PF01025 GrpE KW556_RS15270 PF01513 ATP-NAD kinase KW556_RS15275 PF02463 RecF/RecN/SMC N terminal domain KW556_RS15280 PF01368 DHH family KW556_RS15280 PF02833 DHHA2 domain KW556_RS15285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KW556_RS15290 PF00005 ABC transporter KW556_RS15290 PF02687 FtsX-like permease family KW556_RS15290 PF12704 MacB-like periplasmic core domain KW556_RS15295 PF02321 Outer membrane efflux protein KW556_RS15300 PF00816 H-NS histone family KW556_RS15310 PF02706 Chain length determinant protein KW556_RS15315 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KW556_RS15350 PF00483 Nucleotidyl transferase KW556_RS15355 PF04321 RmlD substrate binding domain KW556_RS15360 PF16363 GDP-mannose 4,6 dehydratase KW556_RS15365 PF02719 Polysaccharide biosynthesis protein KW556_RS15370 PF02397 Bacterial sugar transferase KW556_RS15375 PF01370 NAD dependent epimerase/dehydratase family KW556_RS15405 PF00977 Histidine biosynthesis protein KW556_RS15410 PF00117 Glutamine amidotransferase class-I KW556_RS15425 PF02348 Cytidylyltransferase KW556_RS15430 PF00483 Nucleotidyl transferase KW556_RS15440 PF03102 NeuB family KW556_RS15440 PF08666 SAF domain KW556_RS15445 PF02350 UDP-N-acetylglucosamine 2-epimerase KW556_RS15450 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KW556_RS15455 PF02719 Polysaccharide biosynthesis protein KW556_RS15460 PF01943 Polysaccharide biosynthesis protein KW556_RS15465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KW556_RS15470 PF00132 Bacterial transferase hexapeptide (six repeats) KW556_RS15475 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KW556_RS15475 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KW556_RS15475 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KW556_RS15480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KW556_RS15480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KW556_RS15490 PF00873 AcrB/AcrD/AcrF family KW556_RS15495 PF00529 HlyD membrane-fusion protein of T1SS KW556_RS15495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KW556_RS15500 PF00440 Bacterial regulatory proteins, tetR family KW556_RS15500 PF08361 MAATS-type transcriptional repressor, C-terminal region KW556_RS15515 PF02001 Protein of unknown function DUF134 KW556_RS15530 PF00072 Response regulator receiver domain KW556_RS15535 PF00919 Uncharacterized protein family UPF0004 KW556_RS15535 PF18693 TRAM domain KW556_RS15535 PF04055 Radical SAM superfamily KW556_RS15550 PF01797 Transposase IS200 like KW556_RS15580 PF00665 Integrase core domain KW556_RS15585 PF01695 IstB-like ATP binding protein KW556_RS15595 PF01381 Helix-turn-helix KW556_RS15600 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KW556_RS15645 PF01636 Phosphotransferase enzyme family KW556_RS15650 PF00005 ABC transporter KW556_RS15650 PF12848 ABC transporter KW556_RS15675 PF13438 Domain of unknown function (DUF4113) KW556_RS15675 PF00817 impB/mucB/samB family KW556_RS15675 PF11799 impB/mucB/samB family C-terminal domain KW556_RS15680 PF02321 Outer membrane efflux protein KW556_RS15685 PF00873 AcrB/AcrD/AcrF family KW556_RS15690 PF00529 HlyD membrane-fusion protein of T1SS KW556_RS15690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KW556_RS15730 PF00717 Peptidase S24-like KW556_RS15740 PF02384 N-6 DNA Methylase KW556_RS15745 PF01420 Type I restriction modification DNA specificity domain KW556_RS15760 PF02661 Fic/DOC family KW556_RS15760 PF13784 Fic/DOC family N-terminal KW556_RS15790 PF00291 Pyridoxal-phosphate dependent enzyme KW556_RS15790 PF14821 Threonine synthase N terminus KW556_RS15795 PF08544 GHMP kinases C terminal KW556_RS15795 PF00288 GHMP kinases N terminal domain KW556_RS15800 PF01842 ACT domain KW556_RS15800 PF13840 ACT domain KW556_RS15800 PF00742 Homoserine dehydrogenase KW556_RS15800 PF00696 Amino acid kinase family KW556_RS15800 PF03447 Homoserine dehydrogenase, NAD binding domain KW556_RS15805 PF00588 SpoU rRNA Methylase family KW556_RS15810 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) KW556_RS15825 PF00849 RNA pseudouridylate synthase KW556_RS15825 PF01479 S4 domain KW556_RS15830 PF04079 Segregation and condensation complex subunit ScpB KW556_RS15835 PF02616 Segregation and condensation protein ScpA KW556_RS15840 PF01300 Telomere recombination KW556_RS15845 PF02811 PHP domain KW556_RS15850 PF00425 chorismate binding enzyme KW556_RS15850 PF04715 Anthranilate synthase component I, N terminal region KW556_RS15855 PF00117 Glutamine amidotransferase class-I KW556_RS15855 PF00591 Glycosyl transferase family, a/b domain KW556_RS15855 PF02885 Glycosyl transferase family, helical bundle domain KW556_RS15860 PF00591 Glycosyl transferase family, a/b domain KW556_RS15860 PF02885 Glycosyl transferase family, helical bundle domain KW556_RS15865 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KW556_RS15865 PF00218 Indole-3-glycerol phosphate synthase KW556_RS15870 PF00291 Pyridoxal-phosphate dependent enzyme KW556_RS15875 PF00290 Tryptophan synthase alpha chain KW556_RS15895 PF01609 Transposase DDE domain KW556_RS15905 PF04307 LexA-binding, inner membrane-associated putative hydrolase KW556_RS15925 PF07670 Nucleoside recognition KW556_RS15925 PF01773 Na+ dependent nucleoside transporter N-terminus KW556_RS15925 PF07662 Na+ dependent nucleoside transporter C-terminus KW556_RS15930 PF03960 ArsC family KW556_RS15935 PF01758 Sodium Bile acid symporter family KW556_RS15940 PF02374 Anion-transporting ATPase KW556_RS15945 PF06953 Arsenical resistance operon trans-acting repressor ArsD KW556_RS15965 PF03737 Aldolase/RraA KW556_RS15975 PF00486 Transcriptional regulatory protein, C terminal KW556_RS15975 PF00072 Response regulator receiver domain KW556_RS15990 PF00005 ABC transporter KW556_RS15990 PF00664 ABC transporter transmembrane region KW556_RS15995 PF00005 ABC transporter KW556_RS15995 PF00664 ABC transporter transmembrane region KW556_RS16015 PF18389 TrmO C-terminal domain KW556_RS16015 PF01980 tRNA-methyltransferase O KW556_RS16020 PF01292 Prokaryotic cytochrome b561 KW556_RS16030 PF00072 Response regulator receiver domain KW556_RS16030 PF00486 Transcriptional regulatory protein, C terminal KW556_RS16035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS16040 PF03350 Uncharacterized protein family, UPF0114 KW556_RS16055 PF01266 FAD dependent oxidoreductase KW556_RS16060 PF07883 Cupin domain KW556_RS16060 PF01381 Helix-turn-helix KW556_RS16065 PF00171 Aldehyde dehydrogenase family KW556_RS16070 PF00202 Aminotransferase class-III KW556_RS16075 PF00324 Amino acid permease KW556_RS16085 PF00324 Amino acid permease KW556_RS16090 PF02690 Na+/Pi-cotransporter KW556_RS16095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KW556_RS16095 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KW556_RS16105 PF04381 Putative exonuclease, RdgC KW556_RS16115 PF00149 Calcineurin-like phosphoesterase KW556_RS16115 PF12320 Type 5 capsule protein repressor C-terminal domain KW556_RS16120 PF13476 AAA domain KW556_RS16125 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KW556_RS16135 PF02887 Pyruvate kinase, alpha/beta domain KW556_RS16135 PF00224 Pyruvate kinase, barrel domain KW556_RS16140 PF00924 Mechanosensitive ion channel KW556_RS16140 PF12795 Mechanosensitive ion channel porin domain KW556_RS16140 PF12794 Mechanosensitive ion channel inner membrane domain 1 KW556_RS16150 PF01431 Peptidase family M13 KW556_RS16150 PF05649 Peptidase family M13 KW556_RS16155 PF08448 PAS fold KW556_RS16155 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS16160 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KW556_RS16165 PF05524 PEP-utilising enzyme, N-terminal KW556_RS16165 PF00391 PEP-utilising enzyme, mobile domain KW556_RS16165 PF02896 PEP-utilising enzyme, TIM barrel domain KW556_RS16170 PF00381 PTS HPr component phosphorylation site KW556_RS16175 PF00291 Pyridoxal-phosphate dependent enzyme KW556_RS16180 PF00004 ATPase family associated with various cellular activities (AAA) KW556_RS16180 PF17862 AAA+ lid domain KW556_RS16180 PF01434 Peptidase family M41 KW556_RS16200 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KW556_RS16200 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KW556_RS16205 PF01966 HD domain KW556_RS16205 PF00672 HAMP domain KW556_RS16210 PF01471 Putative peptidoglycan binding domain KW556_RS16210 PF13401 AAA domain KW556_RS16215 PF16537 Type II secretion system protein B KW556_RS16220 PF11356 Type II secretion system protein C KW556_RS16225 PF03958 Bacterial type II/III secretion system short domain KW556_RS16225 PF00263 Bacterial type II and III secretion system protein KW556_RS16230 PF00437 Type II/IV secretion system protein KW556_RS16235 PF00482 Type II secretion system (T2SS), protein F KW556_RS16240 PF07963 Prokaryotic N-terminal methylation motif KW556_RS16240 PF08334 Type II secretion system (T2SS), protein G KW556_RS16245 PF07963 Prokaryotic N-terminal methylation motif KW556_RS16245 PF12019 Type II transport protein GspH KW556_RS16250 PF02501 Type II secretion system (T2SS), protein I KW556_RS16250 PF07963 Prokaryotic N-terminal methylation motif KW556_RS16260 PF03934 Type II secretion system (T2SS), protein K KW556_RS16265 PF12693 GspL periplasmic domain KW556_RS16265 PF05134 Type II secretion system (T2SS), protein L KW556_RS16270 PF04612 Type II secretion system (T2SS), protein M KW556_RS16275 PF01203 Type II secretion system (T2SS), protein N KW556_RS16280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KW556_RS16285 PF02378 Phosphotransferase system, EIIC KW556_RS16295 PF02378 Phosphotransferase system, EIIC KW556_RS16300 PF00232 Glycosyl hydrolase family 1 KW556_RS16305 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KW556_RS16310 PF12833 Helix-turn-helix domain KW556_RS16310 PF07883 Cupin domain KW556_RS16315 PF02056 Family 4 glycosyl hydrolase KW556_RS16315 PF11975 Family 4 glycosyl hydrolase C-terminal domain KW556_RS16320 PF04794 YdjC-like protein KW556_RS16325 PF00589 Phage integrase family KW556_RS16325 PF13356 Arm DNA-binding domain KW556_RS16335 PF05930 Prophage CP4-57 regulatory protein (AlpA) KW556_RS16355 PF09588 YqaJ-like viral recombinase domain KW556_RS16400 PF04002 RadC-like JAB domain KW556_RS16450 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A KW556_RS16455 PF02384 N-6 DNA Methylase KW556_RS16470 PF02463 RecF/RecN/SMC N terminal domain KW556_RS16485 PF01027 Inhibitor of apoptosis-promoting Bax1 KW556_RS16490 PF12805 FUSC-like inner membrane protein yccS KW556_RS16495 PF04358 DsrC like protein KW556_RS16500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KW556_RS16505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS16505 PF03466 LysR substrate binding domain KW556_RS16560 PF11842 Domain of unknown function (DUF3362) KW556_RS16560 PF04055 Radical SAM superfamily KW556_RS16560 PF08497 Radical SAM N-terminal KW556_RS16565 PF00873 AcrB/AcrD/AcrF family KW556_RS16570 PF00529 HlyD membrane-fusion protein of T1SS KW556_RS16570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KW556_RS16575 PF17158 Membrane-associated sensor, integral membrane domain KW556_RS16575 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS16580 PF01734 Patatin-like phospholipase KW556_RS16585 PF13520 Amino acid permease KW556_RS16600 PF00691 OmpA family KW556_RS16600 PF01389 OmpA-like transmembrane domain KW556_RS16605 PF00691 OmpA family KW556_RS16605 PF01389 OmpA-like transmembrane domain KW556_RS16610 PF00691 OmpA family KW556_RS16610 PF01389 OmpA-like transmembrane domain KW556_RS16615 PF00390 Malic enzyme, N-terminal domain KW556_RS16615 PF03949 Malic enzyme, NAD binding domain KW556_RS16620 PF12833 Helix-turn-helix domain KW556_RS16625 PF01554 MatE KW556_RS16630 PF10692 Protein of unknown function (DUF2498) KW556_RS16635 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS16640 PF00860 Permease family KW556_RS16650 PF01235 Sodium:alanine symporter family KW556_RS16655 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KW556_RS16655 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KW556_RS16660 PF01699 Sodium/calcium exchanger protein KW556_RS16665 PF08534 Redoxin KW556_RS16675 PF00293 NUDIX domain KW556_RS16690 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KW556_RS16690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KW556_RS16695 PF03932 CutC family KW556_RS16700 PF00480 ROK family KW556_RS16710 PF01435 Peptidase family M48 KW556_RS16715 PF12849 PBP superfamily domain KW556_RS16720 PF11808 Phosphate regulon sensor protein PhoR KW556_RS16720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS16720 PF00989 PAS fold KW556_RS16720 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS16725 PF00072 Response regulator receiver domain KW556_RS16725 PF00486 Transcriptional regulatory protein, C terminal KW556_RS16730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KW556_RS16735 PF01590 GAF domain KW556_RS16735 PF02954 Bacterial regulatory protein, Fis family KW556_RS16735 PF00158 Sigma-54 interaction domain KW556_RS16740 PF00171 Aldehyde dehydrogenase family KW556_RS16750 PF00892 EamA-like transporter family KW556_RS16755 PF00072 Response regulator receiver domain KW556_RS16755 PF12431 Transcriptional regulator KW556_RS16760 PF00989 PAS fold KW556_RS16760 PF17203 Single cache domain 3 KW556_RS16760 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KW556_RS16760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS16765 PF03949 Malic enzyme, NAD binding domain KW556_RS16765 PF00390 Malic enzyme, N-terminal domain KW556_RS16770 PF03390 2-hydroxycarboxylate transporter family KW556_RS16780 PF01047 MarR family KW556_RS16785 PF00529 HlyD membrane-fusion protein of T1SS KW556_RS16785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KW556_RS16810 PF01679 Proteolipid membrane potential modulator KW556_RS16820 PF03477 ATP cone domain KW556_RS16820 PF13597 Anaerobic ribonucleoside-triphosphate reductase KW556_RS16830 PF00533 BRCA1 C Terminus (BRCT) domain KW556_RS16830 PF01653 NAD-dependent DNA ligase adenylation domain KW556_RS16830 PF03120 NAD-dependent DNA ligase OB-fold domain KW556_RS16830 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KW556_RS16830 PF12826 Helix-hairpin-helix motif KW556_RS16835 PF04354 ZipA, C-terminal FtsZ-binding domain KW556_RS16840 PF06470 SMC proteins Flexible Hinge Domain KW556_RS16840 PF02463 RecF/RecN/SMC N terminal domain KW556_RS16850 PF03458 UPF0126 domain KW556_RS16860 PF05951 Bacterial protein of unknown function (DUF882) KW556_RS16865 PF01471 Putative peptidoglycan binding domain KW556_RS16865 PF03734 L,D-transpeptidase catalytic domain KW556_RS16880 PF00535 Glycosyl transferase family 2 KW556_RS16895 PF00128 Alpha amylase, catalytic domain KW556_RS16905 PF00196 Bacterial regulatory proteins, luxR family KW556_RS16905 PF00072 Response regulator receiver domain KW556_RS16925 PF00999 Sodium/hydrogen exchanger family KW556_RS16925 PF02254 TrkA-N domain KW556_RS16925 PF02080 TrkA-C domain KW556_RS16930 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS16935 PF01171 PP-loop family KW556_RS16935 PF09179 TilS substrate binding domain KW556_RS16935 PF11734 TilS substrate C-terminal domain KW556_RS16940 PF01431 Peptidase family M13 KW556_RS16940 PF05649 Peptidase family M13 KW556_RS16950 PF08543 Phosphomethylpyrimidine kinase KW556_RS16955 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KW556_RS16955 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain KW556_RS16955 PF01276 Orn/Lys/Arg decarboxylase, major domain KW556_RS16960 PF13520 Amino acid permease KW556_RS16965 PF00486 Transcriptional regulatory protein, C terminal KW556_RS16965 PF18500 CadC C-terminal domain 1 KW556_RS16970 PF13520 Amino acid permease KW556_RS16975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS16975 PF03466 LysR substrate binding domain KW556_RS16980 PF12706 Beta-lactamase superfamily domain KW556_RS17005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS17005 PF03466 LysR substrate binding domain KW556_RS17015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KW556_RS17015 PF00205 Thiamine pyrophosphate enzyme, central domain KW556_RS17015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KW556_RS17020 PF03306 Alpha-acetolactate decarboxylase KW556_RS17025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS17025 PF03466 LysR substrate binding domain KW556_RS17030 PF00579 tRNA synthetases class I (W and Y) KW556_RS17035 PF01551 Peptidase family M23 KW556_RS17035 PF08525 Opacity-associated protein A N-terminal motif KW556_RS17035 PF01476 LysM domain KW556_RS17040 PF03702 Anhydro-N-acetylmuramic acid kinase KW556_RS17060 PF02779 Transketolase, pyrimidine binding domain KW556_RS17060 PF02780 Transketolase, C-terminal domain KW556_RS17060 PF00456 Transketolase, thiamine diphosphate binding domain KW556_RS17070 PF02773 S-adenosylmethionine synthetase, C-terminal domain KW556_RS17070 PF02772 S-adenosylmethionine synthetase, central domain KW556_RS17070 PF00438 S-adenosylmethionine synthetase, N-terminal domain KW556_RS17075 PF10263 SprT-like family KW556_RS17075 PF17283 SprT-like zinc ribbon domain KW556_RS17080 PF04231 Endonuclease I KW556_RS17085 PF04452 RNA methyltransferase KW556_RS17090 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KW556_RS17090 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KW556_RS17095 PF02622 Uncharacterized ACR, COG1678 KW556_RS17100 PF03652 Holliday junction resolvase KW556_RS17105 PF00854 POT family KW556_RS17110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS17110 PF03466 LysR substrate binding domain KW556_RS17115 PF07690 Major Facilitator Superfamily KW556_RS17120 PF07726 ATPase family associated with various cellular activities (AAA) KW556_RS17120 PF17863 AAA lid domain KW556_RS17130 PF11992 Domain of unknown function (DUF3488) KW556_RS17130 PF01841 Transglutaminase-like superfamily KW556_RS17130 PF13559 Domain of unknown function (DUF4129) KW556_RS17135 PF01235 Sodium:alanine symporter family KW556_RS17140 PF00923 Transaldolase/Fructose-6-phosphate aldolase KW556_RS17150 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KW556_RS17155 PF07733 Bacterial DNA polymerase III alpha NTPase domain KW556_RS17155 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KW556_RS17155 PF14579 Helix-hairpin-helix motif KW556_RS17155 PF02811 PHP domain KW556_RS17155 PF01336 OB-fold nucleic acid binding domain KW556_RS17160 PF01351 Ribonuclease HII KW556_RS17165 PF02684 Lipid-A-disaccharide synthetase KW556_RS17170 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KW556_RS17170 PF00132 Bacterial transferase hexapeptide (six repeats) KW556_RS17175 PF07977 FabA-like domain KW556_RS17180 PF00132 Bacterial transferase hexapeptide (six repeats) KW556_RS17180 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KW556_RS17185 PF03938 Outer membrane protein (OmpH-like) KW556_RS17190 PF01103 Surface antigen KW556_RS17190 PF07244 Surface antigen variable number repeat KW556_RS17195 PF17820 PDZ domain KW556_RS17195 PF02163 Peptidase family M50 KW556_RS17200 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KW556_RS17200 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KW556_RS17200 PF13288 DXP reductoisomerase C-terminal domain KW556_RS17210 PF01255 Putative undecaprenyl diphosphate synthase KW556_RS17215 PF01765 Ribosome recycling factor KW556_RS17220 PF00696 Amino acid kinase family KW556_RS17225 PF00889 Elongation factor TS KW556_RS17230 PF00318 Ribosomal protein S2 KW556_RS17235 PF00557 Metallopeptidase family M24 KW556_RS17240 PF01842 ACT domain KW556_RS17240 PF01966 HD domain KW556_RS17240 PF01909 Nucleotidyltransferase domain KW556_RS17240 PF08335 GlnD PII-uridylyltransferase KW556_RS17245 PF14602 Hexapeptide repeat of succinyl-transferase KW556_RS17245 PF00132 Bacterial transferase hexapeptide (six repeats) KW556_RS17245 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KW556_RS17250 PF11944 Protein of unknown function (DUF3461) KW556_RS17255 PF00367 phosphotransferase system, EIIB KW556_RS17255 PF02378 Phosphotransferase system, EIIC KW556_RS17260 PF07148 Maltose operon periplasmic protein precursor (MalM) KW556_RS17270 PF00258 Flavodoxin KW556_RS17275 PF00849 RNA pseudouridylate synthase KW556_RS17280 PF04287 tRNA pseudouridine synthase C KW556_RS17305 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) KW556_RS17310 PF07348 Syd protein (SUKH-2) KW556_RS17315 PF14489 QueF-like protein KW556_RS17315 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KW556_RS17325 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS17330 PF11892 Domain of unknown function (DUF3412) KW556_RS17330 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases KW556_RS17330 PF03641 Possible lysine decarboxylase KW556_RS17335 PF01367 5'-3' exonuclease, C-terminal SAM fold KW556_RS17335 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KW556_RS17340 PF00180 Isocitrate/isopropylmalate dehydrogenase KW556_RS17340 PF18324 Hypothetical protein TT1725 KW556_RS17350 PF01728 FtsJ-like methyltransferase KW556_RS17350 PF18125 RlmM ferredoxin-like domain KW556_RS17355 PF04241 Protein of unknown function (DUF423) KW556_RS17365 PF03466 LysR substrate binding domain KW556_RS17365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS17370 PF00672 HAMP domain KW556_RS17370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS17375 PF00817 impB/mucB/samB family KW556_RS17375 PF11799 impB/mucB/samB family C-terminal domain KW556_RS17375 PF11798 IMS family HHH motif KW556_RS17385 PF01965 DJ-1/PfpI family KW556_RS17390 PF02558 Ketopantoate reductase PanE/ApbA KW556_RS17390 PF08546 Ketopantoate reductase PanE/ApbA C terminal KW556_RS17395 PF04461 Protein of unknown function (DUF520) KW556_RS17400 PF03502 Nucleoside-specific channel-forming protein, Tsx KW556_RS17405 PF07690 Major Facilitator Superfamily KW556_RS17410 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KW556_RS17420 PF05175 Methyltransferase small domain KW556_RS17425 PF01722 BolA-like protein KW556_RS17430 PF11973 NQRA C-terminal domain KW556_RS17430 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) KW556_RS17435 PF03116 NQR2, RnfD, RnfE family KW556_RS17440 PF04205 FMN-binding domain KW556_RS17445 PF02508 Rnf-Nqr subunit, membrane protein KW556_RS17450 PF02508 Rnf-Nqr subunit, membrane protein KW556_RS17455 PF00970 Oxidoreductase FAD-binding domain KW556_RS17455 PF00111 2Fe-2S iron-sulfur cluster binding domain KW556_RS17455 PF00175 Oxidoreductase NAD-binding domain KW556_RS17460 PF02424 ApbE family KW556_RS17505 PF00106 short chain dehydrogenase KW556_RS17515 PF00875 DNA photolyase KW556_RS17515 PF03441 FAD binding domain of DNA photolyase KW556_RS17520 PF13411 MerR HTH family regulatory protein KW556_RS17525 PF08349 Protein of unknown function (DUF1722) KW556_RS17540 PF06508 Queuosine biosynthesis protein QueC KW556_RS17555 PF01817 Chorismate mutase type II KW556_RS17555 PF00800 Prephenate dehydratase KW556_RS17585 PF09588 YqaJ-like viral recombinase domain KW556_RS17600 PF13610 DDE domain KW556_RS17615 PF00809 Pterin binding enzyme KW556_RS17620 PF00893 Small Multidrug Resistance protein KW556_RS17625 PF01909 Nucleotidyltransferase domain KW556_RS17625 PF13427 Domain of unknown function (DUF4111) KW556_RS17630 PF00132 Bacterial transferase hexapeptide (six repeats) KW556_RS17635 PF00905 Penicillin binding protein transpeptidase domain KW556_RS17645 PF13495 Phage integrase, N-terminal SAM-like domain KW556_RS17645 PF00589 Phage integrase family KW556_RS17650 PF00239 Resolvase, N terminal domain KW556_RS17650 PF02796 Helix-turn-helix domain of resolvase KW556_RS17660 PF01526 Tn3 transposase DDE domain KW556_RS17660 PF13700 Domain of unknown function (DUF4158) KW556_RS17665 PF01636 Phosphotransferase enzyme family KW556_RS17670 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase KW556_RS17680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS17680 PF03466 LysR substrate binding domain KW556_RS17685 PF07690 Major Facilitator Superfamily KW556_RS17720 PF00144 Beta-lactamase KW556_RS17735 PF13495 Phage integrase, N-terminal SAM-like domain KW556_RS17735 PF00589 Phage integrase family KW556_RS17740 PF00239 Resolvase, N terminal domain KW556_RS17740 PF02796 Helix-turn-helix domain of resolvase KW556_RS17750 PF01381 Helix-turn-helix KW556_RS17765 PF00376 MerR family regulatory protein KW556_RS17765 PF09278 MerR, DNA binding KW556_RS17790 PF02463 RecF/RecN/SMC N terminal domain KW556_RS17845 PF00665 Integrase core domain KW556_RS17850 PF01695 IstB-like ATP binding protein KW556_RS17865 PF05638 Type VI secretion system effector, Hcp KW556_RS17880 PF07804 HipA-like C-terminal domain KW556_RS17880 PF13657 HipA N-terminal domain KW556_RS17890 PF02899 Phage integrase, N-terminal SAM-like domain KW556_RS17890 PF00589 Phage integrase family KW556_RS17925 PF17782 DprA winged helix domain KW556_RS17925 PF02481 DNA recombination-mediator protein A KW556_RS17930 PF16124 RecQ zinc-binding KW556_RS17930 PF00271 Helicase conserved C-terminal domain KW556_RS17930 PF00270 DEAD/DEAH box helicase KW556_RS17935 PF09382 RQC domain KW556_RS17935 PF00270 DEAD/DEAH box helicase KW556_RS17935 PF00271 Helicase conserved C-terminal domain KW556_RS17935 PF00570 HRDC domain KW556_RS17935 PF16124 RecQ zinc-binding KW556_RS17955 PF02384 N-6 DNA Methylase KW556_RS17960 PF01609 Transposase DDE domain KW556_RS17980 PF01381 Helix-turn-helix KW556_RS17990 PF15978 Tn7-like transposition protein D KW556_RS17990 PF06527 TniQ KW556_RS17995 PF13401 AAA domain KW556_RS17995 PF11426 Tn7 transposition regulator TnsC KW556_RS18000 PF00665 Integrase core domain KW556_RS18005 PF08721 TnsA endonuclease C terminal KW556_RS18005 PF08722 TnsA endonuclease N terminal KW556_RS18040 PF13599 Pentapeptide repeats (9 copies) KW556_RS18065 PF01526 Tn3 transposase DDE domain KW556_RS18065 PF13700 Domain of unknown function (DUF4158) KW556_RS18070 PF02796 Helix-turn-helix domain of resolvase KW556_RS18070 PF00239 Resolvase, N terminal domain KW556_RS18090 PF00005 ABC transporter KW556_RS18115 PF04002 RadC-like JAB domain KW556_RS18150 PF00239 Resolvase, N terminal domain KW556_RS18150 PF02796 Helix-turn-helix domain of resolvase KW556_RS18160 PF13610 DDE domain KW556_RS18165 PF01636 Phosphotransferase enzyme family KW556_RS18180 PF13610 DDE domain KW556_RS18190 PF03551 Transcriptional regulator PadR-like family KW556_RS18200 PF01609 Transposase DDE domain KW556_RS18205 PF02371 Transposase IS116/IS110/IS902 family KW556_RS18205 PF01548 Transposase KW556_RS18215 PF00809 Pterin binding enzyme KW556_RS18220 PF00893 Small Multidrug Resistance protein KW556_RS18225 PF00186 Dihydrofolate reductase KW556_RS18250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS18255 PF13609 Gram-negative porin KW556_RS18270 PF00106 short chain dehydrogenase KW556_RS18295 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KW556_RS18325 PF00114 Pilin (bacterial filament) KW556_RS18325 PF07963 Prokaryotic N-terminal methylation motif KW556_RS18330 PF02805 Metal binding domain of Ada KW556_RS18330 PF12833 Helix-turn-helix domain KW556_RS18330 PF06029 AlkA N-terminal domain KW556_RS18330 PF00730 HhH-GPD superfamily base excision DNA repair protein KW556_RS18335 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KW556_RS18335 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KW556_RS18340 PF12392 Collagenase KW556_RS18340 PF01136 Peptidase family U32 KW556_RS18345 PF01810 LysE type translocator KW556_RS18350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS18350 PF03466 LysR substrate binding domain KW556_RS18355 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KW556_RS18355 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KW556_RS18360 PF00672 HAMP domain KW556_RS18360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS18360 PF02743 Cache domain KW556_RS18365 PF00072 Response regulator receiver domain KW556_RS18370 PF01609 Transposase DDE domain KW556_RS18380 PF01584 CheW-like domain KW556_RS18380 PF02895 Signal transducing histidine kinase, homodimeric domain KW556_RS18380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS18380 PF01627 Hpt domain KW556_RS18380 PF07194 P2 response regulator binding domain KW556_RS18385 PF12729 Four helix bundle sensory module for signal transduction KW556_RS18385 PF00672 HAMP domain KW556_RS18385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS18390 PF01584 CheW-like domain KW556_RS18395 PF00672 HAMP domain KW556_RS18395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS18400 PF01739 CheR methyltransferase, SAM binding domain KW556_RS18400 PF03705 CheR methyltransferase, all-alpha domain KW556_RS18405 PF03975 CheD chemotactic sensory transduction KW556_RS18410 PF00072 Response regulator receiver domain KW556_RS18410 PF01339 CheB methylesterase KW556_RS18420 PF12832 MFS_1 like family KW556_RS18425 PF07715 TonB-dependent Receptor Plug Domain KW556_RS18425 PF00593 TonB dependent receptor KW556_RS18445 PF01243 Pyridoxamine 5'-phosphate oxidase KW556_RS18450 PF06228 Haem utilisation ChuX/HutX KW556_RS18460 PF01032 FecCD transport family KW556_RS18465 PF00005 ABC transporter KW556_RS18475 PF07694 5TMR of 5TMR-LYT KW556_RS18475 PF06580 Histidine kinase KW556_RS18480 PF00072 Response regulator receiver domain KW556_RS18480 PF04397 LytTr DNA-binding domain KW556_RS18485 PF13722 5TM C-terminal transporter carbon starvation CstA KW556_RS18485 PF02554 Carbon starvation protein CstA KW556_RS18490 PF03575 Peptidase family S51 KW556_RS18495 PF01894 Uncharacterised protein family UPF0047 KW556_RS18500 PF00842 Alanine racemase, C-terminal domain KW556_RS18500 PF01168 Alanine racemase, N-terminal domain KW556_RS18505 PF00772 DnaB-like helicase N terminal domain KW556_RS18505 PF03796 DnaB-like helicase C terminal domain KW556_RS18515 PF02872 5'-nucleotidase, C-terminal domain KW556_RS18515 PF00149 Calcineurin-like phosphoesterase KW556_RS18535 PF02954 Bacterial regulatory protein, Fis family KW556_RS18535 PF00072 Response regulator receiver domain KW556_RS18535 PF00158 Sigma-54 interaction domain KW556_RS18540 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KW556_RS18540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KW556_RS18550 PF04102 SlyX KW556_RS18555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KW556_RS18560 PF09526 Probable metal-binding protein (DUF2387) KW556_RS18570 PF01584 CheW-like domain KW556_RS18570 PF00072 Response regulator receiver domain KW556_RS18575 PF00561 alpha/beta hydrolase fold KW556_RS18580 PF01590 GAF domain KW556_RS18580 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS18580 PF00563 EAL domain KW556_RS18580 PF00360 Phytochrome region KW556_RS18585 PF06794 Uncharacterised protein family (UPF0270) KW556_RS18590 PF00485 Phosphoribulokinase / Uridine kinase family KW556_RS18605 PF02566 OsmC-like protein KW556_RS18610 PF13545 Crp-like helix-turn-helix domain KW556_RS18610 PF00027 Cyclic nucleotide-binding domain KW556_RS18615 PF08241 Methyltransferase domain KW556_RS18620 PF00267 Gram-negative porin KW556_RS18630 PF00582 Universal stress protein family KW556_RS18645 PF00294 pfkB family carbohydrate kinase KW556_RS18650 PF04227 Indigoidine synthase A like protein KW556_RS18655 PF00194 Eukaryotic-type carbonic anhydrase KW556_RS18660 PF00561 alpha/beta hydrolase fold KW556_RS18680 PF06877 Regulator of ribonuclease activity B KW556_RS18700 PF02080 TrkA-C domain KW556_RS18700 PF06826 Predicted Permease Membrane Region KW556_RS18705 PF03006 Haemolysin-III related KW556_RS18710 PF00282 Pyridoxal-dependent decarboxylase conserved domain KW556_RS18715 PF04279 Intracellular septation protein A KW556_RS18720 PF03795 YCII-related domain KW556_RS18725 PF00459 Inositol monophosphatase family KW556_RS18730 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KW556_RS18735 PF02565 Recombination protein O C terminal KW556_RS18735 PF11967 Recombination protein O N terminal KW556_RS18740 PF07650 KH domain KW556_RS18740 PF01926 50S ribosome-binding GTPase KW556_RS18745 PF00035 Double-stranded RNA binding motif KW556_RS18745 PF14622 Ribonuclease-III-like KW556_RS18750 PF10502 Signal peptidase, peptidase S26 KW556_RS18755 PF06421 GTP-binding protein LepA C-terminus KW556_RS18755 PF00679 Elongation factor G C-terminus KW556_RS18755 PF00009 Elongation factor Tu GTP binding domain KW556_RS18755 PF03144 Elongation factor Tu domain 2 KW556_RS18765 PF17188 MucB/RseB C-terminal domain KW556_RS18765 PF03888 MucB/RseB N-terminal domain KW556_RS18770 PF03873 Anti sigma-E protein RseA, C-terminal domain KW556_RS18770 PF03872 Anti sigma-E protein RseA, N-terminal domain KW556_RS18775 PF08281 Sigma-70, region 4 KW556_RS18775 PF04542 Sigma-70 region 2 KW556_RS18780 PF00890 FAD binding domain KW556_RS18780 PF02910 Fumarate reductase flavoprotein C-term KW556_RS18790 PF03937 Flavinator of succinate dehydrogenase KW556_RS18795 PF01571 Aminomethyltransferase folate-binding domain KW556_RS18800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS18800 PF03466 LysR substrate binding domain KW556_RS18815 PF03091 CutA1 divalent ion tolerance protein KW556_RS18820 PF11412 Disulphide bond corrector protein DsbC KW556_RS18820 PF02683 Cytochrome C biogenesis protein transmembrane region KW556_RS18840 PF01266 FAD dependent oxidoreductase KW556_RS18845 PF01116 Fructose-bisphosphate aldolase class-II KW556_RS18850 PF00162 Phosphoglycerate kinase KW556_RS18855 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KW556_RS18855 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KW556_RS18860 PF00480 ROK family KW556_RS18865 PF01208 Uroporphyrinogen decarboxylase (URO-D) KW556_RS18870 PF09297 NADH pyrophosphatase zinc ribbon domain KW556_RS18870 PF00293 NUDIX domain KW556_RS18875 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KW556_RS18875 PF14850 DNA-binding domain of Proline dehydrogenase KW556_RS18875 PF00171 Aldehyde dehydrogenase family KW556_RS18875 PF01619 Proline dehydrogenase KW556_RS18880 PF08239 Bacterial SH3 domain KW556_RS18885 PF00027 Cyclic nucleotide-binding domain KW556_RS18885 PF00520 Ion transport protein KW556_RS18890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS18890 PF00672 HAMP domain KW556_RS18890 PF02743 Cache domain KW556_RS18895 PF00749 tRNA synthetases class I (E and Q), catalytic domain KW556_RS18900 PF00672 HAMP domain KW556_RS18900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS18910 PF00313 'Cold-shock' DNA-binding domain KW556_RS18950 PF00929 Exonuclease KW556_RS18955 PF03193 RsgA GTPase KW556_RS18960 PF02666 Phosphatidylserine decarboxylase KW556_RS18965 PF09905 DNA-binding protein VF530 KW556_RS18980 PF00171 Aldehyde dehydrogenase family KW556_RS18985 PF00696 Amino acid kinase family KW556_RS18985 PF01472 PUA domain KW556_RS18990 PF07417 Sigma factor-binding transcriptional regulator Crl KW556_RS18995 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) KW556_RS19000 PF00156 Phosphoribosyl transferase domain KW556_RS19005 PF01546 Peptidase family M20/M25/M40 KW556_RS19005 PF07687 Peptidase dimerisation domain KW556_RS19010 PF00226 DnaJ domain KW556_RS19010 PF05099 Tellurite resistance protein TerB KW556_RS19015 PF00483 Nucleotidyl transferase KW556_RS19020 PF01636 Phosphotransferase enzyme family KW556_RS19025 PF04453 LPS transport system D KW556_RS19025 PF03968 OstA-like protein KW556_RS19030 PF00639 PPIC-type PPIASE domain KW556_RS19030 PF09312 SurA N-terminal domain KW556_RS19035 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KW556_RS19040 PF00398 Ribosomal RNA adenine dimethylase KW556_RS19045 PF04379 ApaG domain KW556_RS19050 PF00149 Calcineurin-like phosphoesterase KW556_RS19065 PF00296 Luciferase-like monooxygenase KW556_RS19080 PF07670 Nucleoside recognition KW556_RS19085 PF01018 GTP1/OBG KW556_RS19085 PF01926 50S ribosome-binding GTPase KW556_RS19090 PF01016 Ribosomal L27 protein KW556_RS19095 PF00829 Ribosomal prokaryotic L21 protein KW556_RS19100 PF00348 Polyprenyl synthetase KW556_RS19105 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) KW556_RS19110 PF01145 SPFH domain / Band 7 family KW556_RS19115 PF01145 SPFH domain / Band 7 family KW556_RS19115 PF12221 Bacterial membrane protein N terminal KW556_RS19120 PF01926 50S ribosome-binding GTPase KW556_RS19120 PF13167 GTP-binding GTPase N-terminal KW556_RS19120 PF16360 GTP-binding GTPase Middle Region KW556_RS19125 PF17209 Hfq protein KW556_RS19135 PF01119 DNA mismatch repair protein, C-terminal domain KW556_RS19135 PF08676 MutL C terminal dimerisation domain KW556_RS19140 PF01520 N-acetylmuramoyl-L-alanine amidase KW556_RS19145 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KW556_RS19150 PF01256 Carbohydrate kinase KW556_RS19150 PF03853 YjeF-related protein N-terminus KW556_RS19155 PF08331 Domain of unknown function (DUF1730) KW556_RS19160 PF00480 ROK family KW556_RS19170 PF00005 ABC transporter KW556_RS19170 PF09383 NIL domain KW556_RS19175 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS19180 PF03180 NLPA lipoprotein KW556_RS19185 PF02357 Transcription termination factor nusG KW556_RS19190 PF00672 HAMP domain KW556_RS19190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS19195 PF03707 Bacterial signalling protein N terminal repeat KW556_RS19195 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS19195 PF00563 EAL domain KW556_RS19200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS19200 PF00072 Response regulator receiver domain KW556_RS19200 PF09456 RcsC Alpha-Beta-Loop (ABL) KW556_RS19200 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS19210 PF01966 HD domain KW556_RS19210 PF13286 Phosphohydrolase-associated domain KW556_RS19215 PF00072 Response regulator receiver domain KW556_RS19215 PF01627 Hpt domain KW556_RS19215 PF18415 Histidine kinase receptor ArcB trans-membrane domain KW556_RS19215 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS19215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS19215 PF00989 PAS fold KW556_RS19235 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KW556_RS19240 PF03466 LysR substrate binding domain KW556_RS19240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS19250 PF01259 SAICAR synthetase KW556_RS19255 PF06804 NlpB/DapX lipoprotein KW556_RS19260 PF00701 Dihydrodipicolinate synthetase family KW556_RS19265 PF01842 ACT domain KW556_RS19270 PF00578 AhpC/TSA family KW556_RS19275 PF03887 YfbU domain KW556_RS19280 PF04217 Protein of unknown function, DUF412 KW556_RS19285 PF00871 Acetokinase family KW556_RS19290 PF01515 Phosphate acetyl/butaryl transferase KW556_RS19290 PF07085 DRTGG domain KW556_RS19300 PF00483 Nucleotidyl transferase KW556_RS19305 PF00854 POT family KW556_RS19310 PF00072 Response regulator receiver domain KW556_RS19340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KW556_RS19345 PF02321 Outer membrane efflux protein KW556_RS19350 PF01207 Dihydrouridine synthase (Dus) KW556_RS19355 PF02954 Bacterial regulatory protein, Fis family KW556_RS19390 PF11798 IMS family HHH motif KW556_RS19390 PF11799 impB/mucB/samB family C-terminal domain KW556_RS19390 PF00817 impB/mucB/samB family KW556_RS19390 PF13438 Domain of unknown function (DUF4113) KW556_RS19395 PF00717 Peptidase S24-like KW556_RS19400 PF04542 Sigma-70 region 2 KW556_RS19400 PF03979 Sigma-70 factor, region 1.1 KW556_RS19400 PF00140 Sigma-70 factor, region 1.2 KW556_RS19400 PF04545 Sigma-70, region 4 KW556_RS19400 PF04539 Sigma-70 region 3 KW556_RS19405 PF01119 DNA mismatch repair protein, C-terminal domain KW556_RS19405 PF08676 MutL C terminal dimerisation domain KW556_RS19415 PF01609 Transposase DDE domain KW556_RS19450 PF10369 Small subunit of acetolactate synthase KW556_RS19455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KW556_RS19455 PF00205 Thiamine pyrophosphate enzyme, central domain KW556_RS19455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KW556_RS19470 PF01569 PAP2 superfamily KW556_RS19480 PF08502 LeuA allosteric (dimerisation) domain KW556_RS19480 PF00682 HMGL-like KW556_RS19485 PF00180 Isocitrate/isopropylmalate dehydrogenase KW556_RS19490 PF00330 Aconitase family (aconitate hydratase) KW556_RS19495 PF00694 Aconitase C-terminal domain KW556_RS19515 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS19520 PF00005 ABC transporter KW556_RS19525 PF13638 PIN domain KW556_RS19525 PF02562 PhoH-like protein KW556_RS19535 PF00317 Ribonucleotide reductase, all-alpha domain KW556_RS19535 PF02867 Ribonucleotide reductase, barrel domain KW556_RS19535 PF08343 Ribonucleotide reductase N-terminal KW556_RS19575 PF00563 EAL domain KW556_RS19575 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS19575 PF03707 Bacterial signalling protein N terminal repeat KW556_RS19585 PF00118 TCP-1/cpn60 chaperonin family KW556_RS19590 PF00166 Chaperonin 10 Kd subunit KW556_RS19595 PF01554 MatE KW556_RS19600 PF04186 FxsA cytoplasmic membrane protein KW556_RS19605 PF10415 Fumarase C C-terminus KW556_RS19605 PF00206 Lyase KW556_RS19610 PF03605 Anaerobic c4-dicarboxylate membrane transporter KW556_RS19615 PF00814 Glycoprotease family KW556_RS19620 PF01165 Ribosomal protein S21 KW556_RS19625 PF09424 Yqey-like protein KW556_RS19630 PF08275 DNA primase catalytic core, N-terminal domain KW556_RS19630 PF10410 DnaB-helicase binding domain of primase KW556_RS19630 PF08278 DNA primase DnaG DnaB-binding KW556_RS19630 PF01807 CHC2 zinc finger KW556_RS19635 PF04546 Sigma-70, non-essential region KW556_RS19635 PF03979 Sigma-70 factor, region 1.1 KW556_RS19635 PF00140 Sigma-70 factor, region 1.2 KW556_RS19635 PF04542 Sigma-70 region 2 KW556_RS19635 PF04539 Sigma-70 region 3 KW556_RS19635 PF04545 Sigma-70, region 4 KW556_RS19645 PF00589 Phage integrase family KW556_RS19645 PF13356 Arm DNA-binding domain KW556_RS19720 PF02843 Phosphoribosylglycinamide synthetase, C domain KW556_RS19720 PF02844 Phosphoribosylglycinamide synthetase, N domain KW556_RS19720 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KW556_RS19725 PF01808 AICARFT/IMPCHase bienzyme KW556_RS19725 PF02142 MGS-like domain KW556_RS19730 PF13411 MerR HTH family regulatory protein KW556_RS19735 PF03889 Alternative ribosome-rescue factor A KW556_RS19740 PF06969 HemN C-terminal domain KW556_RS19740 PF04055 Radical SAM superfamily KW556_RS19745 PF01725 Ham1 family KW556_RS19750 PF07690 Major Facilitator Superfamily KW556_RS19755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KW556_RS19755 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KW556_RS19765 PF13302 Acetyltransferase (GNAT) domain KW556_RS19770 PF13302 Acetyltransferase (GNAT) domain KW556_RS19775 PF07504 Fungalysin/Thermolysin Propeptide Motif KW556_RS19775 PF03413 Peptidase propeptide and YPEB domain KW556_RS19775 PF01447 Thermolysin metallopeptidase, catalytic domain KW556_RS19775 PF02868 Thermolysin metallopeptidase, alpha-helical domain KW556_RS19775 PF04151 Bacterial pre-peptidase C-terminal domain KW556_RS19780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS19780 PF03466 LysR substrate binding domain KW556_RS19785 PF07690 Major Facilitator Superfamily KW556_RS19790 PF00583 Acetyltransferase (GNAT) family KW556_RS19800 PF00009 Elongation factor Tu GTP binding domain KW556_RS19800 PF03144 Elongation factor Tu domain 2 KW556_RS19800 PF16658 Class II release factor RF3, C-terminal domain KW556_RS19810 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS19815 PF05762 VWA domain containing CoxE-like protein KW556_RS19820 PF07728 AAA domain (dynein-related subfamily) KW556_RS19820 PF17868 AAA lid domain KW556_RS19820 PF12592 Protein of unknown function (DUF3763) KW556_RS19830 PF00583 Acetyltransferase (GNAT) family KW556_RS19830 PF13673 Acetyltransferase (GNAT) domain KW556_RS19840 PF00501 AMP-binding enzyme KW556_RS19850 PF04262 Glutamate-cysteine ligase KW556_RS19855 PF00675 Insulinase (Peptidase family M16) KW556_RS19855 PF05193 Peptidase M16 inactive domain KW556_RS19860 PF09335 SNARE associated Golgi protein KW556_RS19865 PF00107 Zinc-binding dehydrogenase KW556_RS19865 PF08240 Alcohol dehydrogenase GroES-like domain KW556_RS19890 PF00970 Oxidoreductase FAD-binding domain KW556_RS19890 PF00175 Oxidoreductase NAD-binding domain KW556_RS19895 PF03948 Ribosomal protein L9, C-terminal domain KW556_RS19895 PF01281 Ribosomal protein L9, N-terminal domain KW556_RS19900 PF01084 Ribosomal protein S18 KW556_RS19905 PF01250 Ribosomal protein S6 KW556_RS19910 PF01566 Natural resistance-associated macrophage protein KW556_RS19915 PF02272 DHHA1 domain KW556_RS19915 PF01411 tRNA synthetases class II (A) KW556_RS19915 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KW556_RS19925 PF00216 Bacterial DNA-binding protein KW556_RS19930 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ KW556_RS19935 PF07238 PilZ domain KW556_RS19940 PF18073 Rubredoxin metal binding domain KW556_RS19955 PF18429 Domain of unknown function (DUF5609) KW556_RS19965 PF01048 Phosphorylase superfamily KW556_RS19970 PF01676 Metalloenzyme superfamily KW556_RS19975 PF02885 Glycosyl transferase family, helical bundle domain KW556_RS19975 PF00591 Glycosyl transferase family, a/b domain KW556_RS19975 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KW556_RS19980 PF01791 DeoC/LacD family aldolase KW556_RS19990 PF07670 Nucleoside recognition KW556_RS19990 PF07662 Na+ dependent nucleoside transporter C-terminus KW556_RS19990 PF01773 Na+ dependent nucleoside transporter N-terminus KW556_RS19995 PF01026 TatD related DNase KW556_RS20000 PF07963 Prokaryotic N-terminal methylation motif KW556_RS20005 PF02664 S-Ribosylhomocysteinase (LuxS) KW556_RS20015 PF00543 Nitrogen regulatory protein P-II KW556_RS20020 PF02540 NAD synthase KW556_RS20020 PF00795 Carbon-nitrogen hydrolase KW556_RS20035 PF05567 Neisseria PilC beta-propeller domain KW556_RS20055 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor KW556_RS20055 PF07963 Prokaryotic N-terminal methylation motif KW556_RS20060 PF02401 LytB protein KW556_RS20065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KW556_RS20070 PF01252 Signal peptidase (SPase) II KW556_RS20075 PF08264 Anticodon-binding domain of tRNA KW556_RS20075 PF00133 tRNA synthetases class I (I, L, M and V) KW556_RS20075 PF06827 Zinc finger found in FPG and IleRS KW556_RS20080 PF06574 FAD synthetase KW556_RS20080 PF01687 Riboflavin kinase KW556_RS20085 PF03023 Lipid II flippase MurJ KW556_RS20090 PF01649 Ribosomal protein S20 KW556_RS20095 PF01022 Bacterial regulatory protein, arsR family KW556_RS20100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS20100 PF03466 LysR substrate binding domain KW556_RS20110 PF06965 Na+/H+ antiporter 1 KW556_RS20115 PF00303 Thymidylate synthase KW556_RS20120 PF01790 Prolipoprotein diacylglyceryl transferase KW556_RS20125 PF01590 GAF domain KW556_RS20125 PF05524 PEP-utilising enzyme, N-terminal KW556_RS20125 PF00391 PEP-utilising enzyme, mobile domain KW556_RS20125 PF02896 PEP-utilising enzyme, TIM barrel domain KW556_RS20130 PF00293 NUDIX domain KW556_RS20135 PF02976 DNA mismatch repair enzyme MutH KW556_RS20145 PF01245 Ribosomal protein L19 KW556_RS20150 PF01746 tRNA (Guanine-1)-methyltransferase KW556_RS20155 PF05239 PRC-barrel domain KW556_RS20155 PF01782 RimM N-terminal domain KW556_RS20160 PF00886 Ribosomal protein S16 KW556_RS20165 PF02978 Signal peptide binding domain KW556_RS20165 PF02881 SRP54-type protein, helical bundle domain KW556_RS20165 PF00448 SRP54-type protein, GTPase domain KW556_RS20170 PF01578 Cytochrome C assembly protein KW556_RS20175 PF00571 CBS domain KW556_RS20175 PF03471 Transporter associated domain KW556_RS20175 PF01595 Cyclin M transmembrane N-terminal domain KW556_RS20180 PF02082 Transcriptional regulator KW556_RS20185 PF00970 Oxidoreductase FAD-binding domain KW556_RS20185 PF00042 Globin KW556_RS20185 PF00175 Oxidoreductase NAD-binding domain KW556_RS20190 PF08238 Sel1 repeat KW556_RS20195 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KW556_RS20195 PF00056 lactate/malate dehydrogenase, NAD binding domain KW556_RS20200 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS20205 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS20210 PF00497 Bacterial extracellular solute-binding proteins, family 3 KW556_RS20215 PF00005 ABC transporter KW556_RS20220 PF02863 Arginine repressor, C-terminal domain KW556_RS20220 PF01316 Arginine repressor, DNA binding domain KW556_RS20225 PF04261 Dyp-type peroxidase family KW556_RS20230 PF08402 TOBE domain KW556_RS20230 PF00005 ABC transporter KW556_RS20240 PF13416 Bacterial extracellular solute-binding protein KW556_RS20245 PF00543 Nitrogen regulatory protein P-II KW556_RS20250 PF00472 RF-1 domain KW556_RS20255 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KW556_RS20255 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KW556_RS20265 PF03883 Peroxide stress protein YaaA KW556_RS20270 PF00437 Type II/IV secretion system protein KW556_RS20275 PF00437 Type II/IV secretion system protein KW556_RS20280 PF01168 Alanine racemase, N-terminal domain KW556_RS20285 PF03807 NADP oxidoreductase coenzyme F420-dependent KW556_RS20285 PF14748 Pyrroline-5-carboxylate reductase dimerisation KW556_RS20290 PF02325 YGGT family KW556_RS20295 PF02594 Uncharacterised ACR, YggU family COG1872 KW556_RS20305 PF07662 Na+ dependent nucleoside transporter C-terminus KW556_RS20305 PF07670 Nucleoside recognition KW556_RS20305 PF01773 Na+ dependent nucleoside transporter N-terminus KW556_RS20310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS20310 PF03466 LysR substrate binding domain KW556_RS20315 PF00255 Glutathione peroxidase KW556_RS20325 PF02595 Glycerate kinase family KW556_RS20330 PF02447 GntP family permease KW556_RS20335 PF17853 GGDEF-like domain KW556_RS20335 PF13556 PucR C-terminal helix-turn-helix domain KW556_RS20335 PF05651 Putative sugar diacid recognition KW556_RS20340 PF06062 Uncharacterised protein family (UPF0231) KW556_RS20360 PF03372 Endonuclease/Exonuclease/phosphatase family KW556_RS20370 PF00270 DEAD/DEAH box helicase KW556_RS20370 PF00271 Helicase conserved C-terminal domain KW556_RS20380 PF08534 Redoxin KW556_RS20385 PF00403 Heavy-metal-associated domain KW556_RS20395 PF01553 Acyltransferase KW556_RS20415 PF00578 AhpC/TSA family KW556_RS20420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS20420 PF03466 LysR substrate binding domain KW556_RS20435 PF00684 DnaJ central domain KW556_RS20435 PF01556 DnaJ C terminal domain KW556_RS20435 PF00226 DnaJ domain KW556_RS20455 PF00854 POT family KW556_RS20460 PF07690 Major Facilitator Superfamily KW556_RS20465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS20465 PF03466 LysR substrate binding domain KW556_RS20505 PF03989 DNA gyrase C-terminal domain, beta-propeller KW556_RS20505 PF00521 DNA gyrase/topoisomerase IV, subunit A KW556_RS20510 PF00986 DNA gyrase B subunit, carboxyl terminus KW556_RS20510 PF01751 Toprim domain KW556_RS20510 PF00204 DNA gyrase B KW556_RS20510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS20515 PF05728 Uncharacterised protein family (UPF0227) KW556_RS20520 PF00149 Calcineurin-like phosphoesterase KW556_RS20525 PF06853 Protein of unknown function (DUF1249) KW556_RS20530 PF00293 NUDIX domain KW556_RS20535 PF02321 Outer membrane efflux protein KW556_RS20540 PF01467 Cytidylyltransferase-like KW556_RS20540 PF00294 pfkB family carbohydrate kinase KW556_RS20545 PF03279 Bacterial lipid A biosynthesis acyltransferase KW556_RS20550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KW556_RS20550 PF02378 Phosphotransferase system, EIIC KW556_RS20550 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KW556_RS20555 PF01232 Mannitol dehydrogenase Rossmann domain KW556_RS20555 PF08125 Mannitol dehydrogenase C-terminal domain KW556_RS20560 PF05068 Mannitol repressor KW556_RS20580 PF01544 CorA-like Mg2+ transporter protein KW556_RS20585 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KW556_RS20590 PF04307 LexA-binding, inner membrane-associated putative hydrolase KW556_RS20595 PF01773 Na+ dependent nucleoside transporter N-terminus KW556_RS20595 PF07662 Na+ dependent nucleoside transporter C-terminus KW556_RS20595 PF07670 Nucleoside recognition KW556_RS20600 PF00271 Helicase conserved C-terminal domain KW556_RS20600 PF03880 DbpA RNA binding domain KW556_RS20600 PF00270 DEAD/DEAH box helicase KW556_RS20620 PF01040 UbiA prenyltransferase family KW556_RS20625 PF00425 chorismate binding enzyme KW556_RS20630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KW556_RS20630 PF16582 Middle domain of thiamine pyrophosphate KW556_RS20630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KW556_RS20635 PF12697 Alpha/beta hydrolase family KW556_RS20640 PF00378 Enoyl-CoA hydratase/isomerase KW556_RS20645 PF13378 Enolase C-terminal domain-like KW556_RS20650 PF00501 AMP-binding enzyme KW556_RS20655 PF01752 Collagenase KW556_RS20655 PF08453 Peptidase family M9 N-terminal KW556_RS20660 PF02698 DUF218 domain KW556_RS20665 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KW556_RS20665 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KW556_RS20675 PF00072 Response regulator receiver domain KW556_RS20675 PF01584 CheW-like domain KW556_RS20685 PF08351 Domain of unknown function (DUF1726) KW556_RS20685 PF13718 GNAT acetyltransferase 2 KW556_RS20685 PF05127 Helicase KW556_RS20685 PF17176 tRNA-binding domain KW556_RS20700 PF00210 Ferritin-like domain KW556_RS20705 PF02142 MGS-like domain KW556_RS20710 PF00465 Iron-containing alcohol dehydrogenase KW556_RS20720 PF03577 Peptidase family C69 KW556_RS20725 PF00106 short chain dehydrogenase KW556_RS20745 PF16657 Maltogenic Amylase, C-terminal domain KW556_RS20745 PF00128 Alpha amylase, catalytic domain KW556_RS20745 PF02903 Alpha amylase, N-terminal ig-like domain KW556_RS20765 PF00884 Sulfatase KW556_RS20770 PF01037 Lrp/AsnC ligand binding domain KW556_RS20780 PF04204 Homoserine O-succinyltransferase KW556_RS20785 PF01966 HD domain KW556_RS20785 PF12072 Domain of unknown function (DUF3552) KW556_RS20785 PF00013 KH domain KW556_RS20790 PF00994 Probable molybdopterin binding domain KW556_RS20790 PF02464 Competence-damaged protein KW556_RS20810 PF04363 Protein of unknown function (DUF496) KW556_RS20840 PF12137 RNA polymerase recycling family C-terminal KW556_RS20840 PF00176 SNF2 family N-terminal domain KW556_RS20840 PF18337 RapA N-terminal Tudor like domain KW556_RS20840 PF00271 Helicase conserved C-terminal domain KW556_RS20840 PF18339 RapA N-terminal Tudor like domain 1 KW556_RS20845 PF00849 RNA pseudouridylate synthase KW556_RS20855 PF12464 Maltose acetyltransferase KW556_RS20855 PF14602 Hexapeptide repeat of succinyl-transferase KW556_RS20860 PF11941 Domain of unknown function (DUF3459) KW556_RS20860 PF00128 Alpha amylase, catalytic domain KW556_RS20865 PF00367 phosphotransferase system, EIIB KW556_RS20865 PF02378 Phosphotransferase system, EIIC KW556_RS20870 PF00356 Bacterial regulatory proteins, lacI family KW556_RS20885 PF00710 Asparaginase, N-terminal KW556_RS20885 PF17763 Glutaminase/Asparaginase C-terminal domain KW556_RS20890 PF03471 Transporter associated domain KW556_RS20890 PF01595 Cyclin M transmembrane N-terminal domain KW556_RS20890 PF00571 CBS domain KW556_RS20895 PF09335 SNARE associated Golgi protein KW556_RS20900 PF00768 D-alanyl-D-alanine carboxypeptidase KW556_RS20935 PF02599 Global regulator protein family KW556_RS20940 PF01842 ACT domain KW556_RS20940 PF13840 ACT domain KW556_RS20940 PF00696 Amino acid kinase family KW556_RS20945 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KW556_RS20945 PF01411 tRNA synthetases class II (A) KW556_RS20945 PF02272 DHHA1 domain KW556_RS20950 PF02631 RecX family KW556_RS20955 PF00154 recA bacterial DNA recombination protein KW556_RS20960 PF02464 Competence-damaged protein KW556_RS20970 PF09588 YqaJ-like viral recombinase domain KW556_RS21015 PF04002 RadC-like JAB domain KW556_RS21065 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A KW556_RS21080 PF18766 SWI2/SNF2 ATPase KW556_RS21080 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KW556_RS21080 PF11867 Domain of unknown function (DUF3387) KW556_RS21100 PF02384 N-6 DNA Methylase KW556_RS21100 PF12161 HsdM N-terminal domain KW556_RS21115 PF00717 Peptidase S24-like KW556_RS21125 PF03050 Transposase IS66 family KW556_RS21130 PF00672 HAMP domain KW556_RS21130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS21135 PF13700 Domain of unknown function (DUF4158) KW556_RS21135 PF01526 Tn3 transposase DDE domain KW556_RS21145 PF08447 PAS fold KW556_RS21145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS21155 PF01609 Transposase DDE domain KW556_RS21155 PF05598 Transposase domain (DUF772) KW556_RS21160 PF05230 MASE2 domain KW556_RS21160 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS21215 PF14659 Phage integrase, N-terminal SAM-like domain KW556_RS21215 PF13356 Arm DNA-binding domain KW556_RS21215 PF00589 Phage integrase family KW556_RS21220 PF01624 MutS domain I KW556_RS21220 PF05188 MutS domain II KW556_RS21220 PF05192 MutS domain III KW556_RS21220 PF00488 MutS domain V KW556_RS21220 PF05190 MutS family domain IV KW556_RS21225 PF01734 Patatin-like phospholipase KW556_RS21235 PF04172 LrgB-like family KW556_RS21240 PF03788 LrgA family KW556_RS21245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS21245 PF03466 LysR substrate binding domain KW556_RS21255 PF04073 Aminoacyl-tRNA editing domain KW556_RS21285 PF06968 Biotin and Thiamin Synthesis associated domain KW556_RS21285 PF04055 Radical SAM superfamily KW556_RS21290 PF05690 Thiazole biosynthesis protein ThiG KW556_RS21300 PF00899 ThiF family KW556_RS21305 PF02581 Thiamine monophosphate synthase KW556_RS21310 PF13667 ThiC-associated domain KW556_RS21310 PF01964 Radical SAM ThiC family KW556_RS21315 PF01117 Aerolysin toxin KW556_RS21315 PF03440 Aerolysin/Pertussis toxin (APT) domain KW556_RS21330 PF00486 Transcriptional regulatory protein, C terminal KW556_RS21330 PF00072 Response regulator receiver domain KW556_RS21335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS21340 PF08443 RimK-like ATP-grasp domain KW556_RS21340 PF18030 RimK PreATP-grasp domain KW556_RS21345 PF02310 B12 binding domain KW556_RS21345 PF02607 B12 binding domain KW556_RS21345 PF02965 Vitamin B12 dependent methionine synthase, activation domain KW556_RS21345 PF00809 Pterin binding enzyme KW556_RS21345 PF02574 Homocysteine S-methyltransferase KW556_RS21350 PF00999 Sodium/hydrogen exchanger family KW556_RS21375 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KW556_RS21385 PF07690 Major Facilitator Superfamily KW556_RS21390 PF01914 MarC family integral membrane protein KW556_RS21400 PF01523 Putative modulator of DNA gyrase KW556_RS21405 PF00795 Carbon-nitrogen hydrolase KW556_RS21415 PF13502 AsmA-like C-terminal region KW556_RS21415 PF13116 Protein of unknown function KW556_RS21420 PF10150 Ribonuclease E/G family KW556_RS21420 PF00575 S1 RNA binding domain KW556_RS21430 PF04093 rod shape-determining protein MreD KW556_RS21435 PF04085 rod shape-determining protein MreC KW556_RS21465 PF07963 Prokaryotic N-terminal methylation motif KW556_RS21465 PF00114 Pilin (bacterial filament) KW556_RS21470 PF07963 Prokaryotic N-terminal methylation motif KW556_RS21485 PF00482 Type II secretion system (T2SS), protein F KW556_RS21490 PF00437 Type II/IV secretion system protein KW556_RS21490 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KW556_RS21500 PF13401 AAA domain KW556_RS21500 PF09077 Mu B transposition protein, C terminal KW556_RS21505 PF00263 Bacterial type II and III secretion system protein KW556_RS21505 PF03958 Bacterial type II/III secretion system short domain KW556_RS21535 PF00563 EAL domain KW556_RS21535 PF17157 Gammaproteobacterial periplasmic sensor domain KW556_RS21535 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS21540 PF12792 CSS motif domain associated with EAL KW556_RS21540 PF00563 EAL domain KW556_RS21545 PF01699 Sodium/calcium exchanger protein KW556_RS21550 PF00221 Aromatic amino acid lyase KW556_RS21555 PF01175 Urocanase Rossmann-like domain KW556_RS21555 PF17392 Urocanase C-terminal domain KW556_RS21555 PF17391 Urocanase N-terminal domain KW556_RS21560 PF00491 Arginase family KW556_RS21565 PF01979 Amidohydrolase family KW556_RS21570 PF00392 Bacterial regulatory proteins, gntR family KW556_RS21570 PF07702 UTRA domain KW556_RS21575 PF00484 Carbonic anhydrase KW556_RS21580 PF00140 Sigma-70 factor, region 1.2 KW556_RS21580 PF04542 Sigma-70 region 2 KW556_RS21580 PF04545 Sigma-70, region 4 KW556_RS21585 PF18075 FtsX extracellular domain KW556_RS21590 PF00005 ABC transporter KW556_RS21595 PF00448 SRP54-type protein, GTPase domain KW556_RS21595 PF02881 SRP54-type protein, helical bundle domain KW556_RS21620 PF02254 TrkA-N domain KW556_RS21620 PF00999 Sodium/hydrogen exchanger family KW556_RS21625 PF02525 Flavodoxin-like fold KW556_RS21630 PF03466 LysR substrate binding domain KW556_RS21630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS21635 PF00106 short chain dehydrogenase KW556_RS21650 PF00326 Prolyl oligopeptidase family KW556_RS21650 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KW556_RS21665 PF13091 PLD-like domain KW556_RS21675 PF00497 Bacterial extracellular solute-binding proteins, family 3 KW556_RS21675 PF01464 Transglycosylase SLT domain KW556_RS21685 PF02416 mttA/Hcf106 family KW556_RS21690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS21690 PF03466 LysR substrate binding domain KW556_RS21695 PF01914 MarC family integral membrane protein KW556_RS21700 PF10678 Protein of unknown function (DUF2492) KW556_RS21705 PF00375 Sodium:dicarboxylate symporter family KW556_RS21715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS21715 PF03466 LysR substrate binding domain KW556_RS21720 PF13533 Biotin-lipoyl like KW556_RS21725 PF07690 Major Facilitator Superfamily KW556_RS21730 PF07947 YhhN family KW556_RS21745 PF00440 Bacterial regulatory proteins, tetR family KW556_RS21785 PF03143 Elongation factor Tu C-terminal domain KW556_RS21785 PF03144 Elongation factor Tu domain 2 KW556_RS21785 PF00009 Elongation factor Tu GTP binding domain KW556_RS21790 PF00679 Elongation factor G C-terminus KW556_RS21790 PF14492 Elongation Factor G, domain II KW556_RS21790 PF03764 Elongation factor G, domain IV KW556_RS21790 PF00009 Elongation factor Tu GTP binding domain KW556_RS21790 PF03144 Elongation factor Tu domain 2 KW556_RS21795 PF00177 Ribosomal protein S7p/S5e KW556_RS21800 PF00164 Ribosomal protein S12/S23 KW556_RS21805 PF04077 DsrH like protein KW556_RS21810 PF02635 DsrE/DsrF-like family KW556_RS21815 PF02635 DsrE/DsrF-like family KW556_RS21820 PF01042 Endoribonuclease L-PSP KW556_RS21825 PF08348 YheO-like PAS domain KW556_RS21825 PF13309 HTH domain KW556_RS21830 PF04998 RNA polymerase Rpb1, domain 5 KW556_RS21830 PF04997 RNA polymerase Rpb1, domain 1 KW556_RS21830 PF00623 RNA polymerase Rpb1, domain 2 KW556_RS21830 PF04983 RNA polymerase Rpb1, domain 3 KW556_RS21830 PF05000 RNA polymerase Rpb1, domain 4 KW556_RS21835 PF04563 RNA polymerase beta subunit KW556_RS21835 PF04561 RNA polymerase Rpb2, domain 2 KW556_RS21835 PF04565 RNA polymerase Rpb2, domain 3 KW556_RS21835 PF10385 RNA polymerase beta subunit external 1 domain KW556_RS21835 PF00562 RNA polymerase Rpb2, domain 6 KW556_RS21835 PF04560 RNA polymerase Rpb2, domain 7 KW556_RS21840 PF16320 Ribosomal protein L7/L12 dimerisation domain KW556_RS21840 PF00542 Ribosomal protein L7/L12 C-terminal domain KW556_RS21845 PF00466 Ribosomal protein L10 KW556_RS21850 PF00687 Ribosomal protein L1p/L10e family KW556_RS21855 PF00298 Ribosomal protein L11, RNA binding domain KW556_RS21855 PF03946 Ribosomal protein L11, N-terminal domain KW556_RS21860 PF00467 KOW motif KW556_RS21860 PF02357 Transcription termination factor nusG KW556_RS21865 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KW556_RS21875 PF03144 Elongation factor Tu domain 2 KW556_RS21875 PF00009 Elongation factor Tu GTP binding domain KW556_RS21875 PF03143 Elongation factor Tu C-terminal domain KW556_RS21895 PF00485 Phosphoribulokinase / Uridine kinase family KW556_RS21900 PF02237 Biotin protein ligase C terminal domain KW556_RS21900 PF08279 HTH domain KW556_RS21900 PF03099 Biotin/lipoate A/B protein ligase family KW556_RS21905 PF01565 FAD binding domain KW556_RS21905 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KW556_RS21910 PF02254 TrkA-N domain KW556_RS21910 PF02080 TrkA-C domain KW556_RS21915 PF02386 Cation transport protein KW556_RS21920 PF01131 DNA topoisomerase KW556_RS21920 PF01751 Toprim domain KW556_RS21930 PF00497 Bacterial extracellular solute-binding proteins, family 3 KW556_RS21930 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS21930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS21935 PF03264 NapC/NirT cytochrome c family, N-terminal region KW556_RS21940 PF01568 Molydopterin dinucleotide binding domain KW556_RS21940 PF18364 Molybdopterin oxidoreductase N-terminal domain KW556_RS21940 PF00384 Molybdopterin oxidoreductase KW556_RS21950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS21955 PF00072 Response regulator receiver domain KW556_RS21955 PF00486 Transcriptional regulatory protein, C terminal KW556_RS21970 PF01794 Ferric reductase like transmembrane component KW556_RS21975 PF00174 Oxidoreductase molybdopterin binding domain KW556_RS21980 PF06496 Protein of unknown function (DUF1097) KW556_RS21985 PF00072 Response regulator receiver domain KW556_RS21985 PF00158 Sigma-54 interaction domain KW556_RS21995 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS21995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS22015 PF00571 CBS domain KW556_RS22015 PF00478 IMP dehydrogenase / GMP reductase domain KW556_RS22020 PF10063 Uncharacterized integral membrane protein (DUF2301) KW556_RS22030 PF01037 Lrp/AsnC ligand binding domain KW556_RS22035 PF03590 Aspartate-ammonia ligase KW556_RS22040 PF00004 ATPase family associated with various cellular activities (AAA) KW556_RS22040 PF07724 AAA domain (Cdc48 subfamily) KW556_RS22040 PF17871 AAA lid domain KW556_RS22040 PF02861 Clp amino terminal domain, pathogenicity island component KW556_RS22040 PF10431 C-terminal, D2-small domain, of ClpB protein KW556_RS22045 PF02578 Multi-copper polyphenol oxidoreductase laccase KW556_RS22050 PF00849 RNA pseudouridylate synthase KW556_RS22050 PF01479 S4 domain KW556_RS22055 PF13525 Outer membrane lipoprotein KW556_RS22060 PF01609 Transposase DDE domain KW556_RS22060 PF13006 Insertion element 4 transposase N-terminal KW556_RS22065 PF07992 Pyridine nucleotide-disulphide oxidoreductase KW556_RS22065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KW556_RS22070 PF00375 Sodium:dicarboxylate symporter family KW556_RS22075 PF03313 Serine dehydratase alpha chain KW556_RS22080 PF13309 HTH domain KW556_RS22080 PF08348 YheO-like PAS domain KW556_RS22090 PF02233 NAD(P) transhydrogenase beta subunit KW556_RS22095 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KW556_RS22095 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KW556_RS22095 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KW556_RS22100 PF00465 Iron-containing alcohol dehydrogenase KW556_RS22105 PF12833 Helix-turn-helix domain KW556_RS22105 PF06719 AraC-type transcriptional regulator N-terminus KW556_RS22110 PF08212 Lipocalin-like domain KW556_RS22115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS22115 PF02743 Cache domain KW556_RS22115 PF00672 HAMP domain KW556_RS22125 PF03466 LysR substrate binding domain KW556_RS22125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS22145 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KW556_RS22145 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KW556_RS22150 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain KW556_RS22150 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain KW556_RS22155 PF01316 Arginine repressor, DNA binding domain KW556_RS22155 PF02863 Arginine repressor, C-terminal domain KW556_RS22160 PF03606 C4-dicarboxylate anaerobic carrier KW556_RS22165 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KW556_RS22165 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KW556_RS22170 PF00696 Amino acid kinase family KW556_RS22210 PF06969 HemN C-terminal domain KW556_RS22210 PF04055 Radical SAM superfamily KW556_RS22215 PF10675 Protein of unknown function (DUF2489) KW556_RS22220 PF04220 Der GTPase activator (YihI) KW556_RS22225 PF00034 Cytochrome c KW556_RS22230 PF01926 50S ribosome-binding GTPase KW556_RS22250 PF01488 Shikimate / quinate 5-dehydrogenase KW556_RS22250 PF08501 Shikimate dehydrogenase substrate binding domain KW556_RS22250 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KW556_RS22255 PF01218 Coproporphyrinogen III oxidase KW556_RS22260 PF01300 Telomere recombination KW556_RS22265 PF00731 AIR carboxylase KW556_RS22270 PF01396 Topoisomerase DNA binding C4 zinc finger KW556_RS22275 PF04361 Protein of unknown function (DUF494) KW556_RS22280 PF17782 DprA winged helix domain KW556_RS22280 PF02481 DNA recombination-mediator protein A KW556_RS22285 PF01476 LysM domain KW556_RS22290 PF01327 Polypeptide deformylase KW556_RS22295 PF02911 Formyl transferase, C-terminal domain KW556_RS22295 PF00551 Formyl transferase KW556_RS22300 PF01189 16S rRNA methyltransferase RsmB/F KW556_RS22300 PF01029 NusB family KW556_RS22305 PF02080 TrkA-C domain KW556_RS22305 PF02254 TrkA-N domain KW556_RS22310 PF02386 Cation transport protein KW556_RS22315 PF00679 Elongation factor G C-terminus KW556_RS22315 PF00009 Elongation factor Tu GTP binding domain KW556_RS22315 PF03144 Elongation factor Tu domain 2 KW556_RS22320 PF00120 Glutamine synthetase, catalytic domain KW556_RS22320 PF03951 Glutamine synthetase, beta-Grasp domain KW556_RS22330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS22330 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS22330 PF00989 PAS fold KW556_RS22335 PF02954 Bacterial regulatory protein, Fis family KW556_RS22335 PF00072 Response regulator receiver domain KW556_RS22335 PF00158 Sigma-54 interaction domain KW556_RS22340 PF00962 Adenosine/AMP deaminase KW556_RS22345 PF02646 RmuC family KW556_RS22360 PF02082 Transcriptional regulator KW556_RS22365 PF00294 pfkB family carbohydrate kinase KW556_RS22370 PF03466 LysR substrate binding domain KW556_RS22370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS22375 PF00117 Glutamine amidotransferase class-I KW556_RS22375 PF00958 GMP synthase C terminal domain KW556_RS22375 PF02540 NAD synthase KW556_RS22380 PF00171 Aldehyde dehydrogenase family KW556_RS22385 PF00202 Aminotransferase class-III KW556_RS22390 PF07883 Cupin domain KW556_RS22390 PF01381 Helix-turn-helix KW556_RS22395 PF00171 Aldehyde dehydrogenase family KW556_RS22405 PF00892 EamA-like transporter family KW556_RS22410 PF17200 Single Cache domain 2 KW556_RS22410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS22410 PF00672 HAMP domain KW556_RS22415 PF04143 Sulphur transport KW556_RS22420 PF01389 OmpA-like transmembrane domain KW556_RS22420 PF00691 OmpA family KW556_RS22425 PF00585 C-terminal regulatory domain of Threonine dehydratase KW556_RS22425 PF00291 Pyridoxal-phosphate dependent enzyme KW556_RS22430 PF00920 Dehydratase family KW556_RS22435 PF01063 Amino-transferase class IV KW556_RS22445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KW556_RS22445 PF00205 Thiamine pyrophosphate enzyme, central domain KW556_RS22445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KW556_RS22450 PF01078 Magnesium chelatase, subunit ChlI KW556_RS22450 PF13335 Magnesium chelatase, subunit ChlI C-terminal KW556_RS22455 PF01553 Acyltransferase KW556_RS22460 PF01553 Acyltransferase KW556_RS22465 PF04463 Protein of unknown function (DUF523) KW556_RS22475 PF00857 Isochorismatase family KW556_RS22480 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KW556_RS22480 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KW556_RS22485 PF01323 DSBA-like thioredoxin domain KW556_RS22490 PF01636 Phosphotransferase enzyme family KW556_RS22495 PF13746 4Fe-4S dicluster domain KW556_RS22495 PF12801 4Fe-4S binding domain KW556_RS22495 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase KW556_RS22500 PF06288 Protein of unknown function (DUF1040) KW556_RS22505 PF00563 EAL domain KW556_RS22505 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS22505 PF00360 Phytochrome region KW556_RS22505 PF01590 GAF domain KW556_RS22510 PF13411 MerR HTH family regulatory protein KW556_RS22515 PF00403 Heavy-metal-associated domain KW556_RS22520 PF00156 Phosphoribosyl transferase domain KW556_RS22525 PF01138 3' exoribonuclease family, domain 1 KW556_RS22525 PF03725 3' exoribonuclease family, domain 2 KW556_RS22530 PF08340 Domain of unknown function (DUF1732) KW556_RS22530 PF03755 YicC-like family, N-terminal region KW556_RS22535 PF03466 LysR substrate binding domain KW556_RS22535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS22540 PF00107 Zinc-binding dehydrogenase KW556_RS22540 PF08240 Alcohol dehydrogenase GroES-like domain KW556_RS22545 PF00756 Putative esterase KW556_RS22555 PF12867 DinB superfamily KW556_RS22555 PF03781 Sulfatase-modifying factor enzyme 1 KW556_RS22560 PF13593 SBF-like CPA transporter family (DUF4137) KW556_RS22565 PF13520 Amino acid permease KW556_RS22570 PF01588 Putative tRNA binding domain KW556_RS22575 PF13520 Amino acid permease KW556_RS22580 PF04074 YhcH/YjgK/YiaL KW556_RS22585 PF02929 Beta galactosidase small chain KW556_RS22585 PF00703 Glycosyl hydrolases family 2 KW556_RS22585 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KW556_RS22585 PF02837 Glycosyl hydrolases family 2, sugar binding domain KW556_RS22585 PF16353 Domain of unknown function(DUF4981) KW556_RS22590 PF00356 Bacterial regulatory proteins, lacI family KW556_RS22625 PF00132 Bacterial transferase hexapeptide (six repeats) KW556_RS22630 PF01367 5'-3' exonuclease, C-terminal SAM fold KW556_RS22630 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KW556_RS22630 PF00476 DNA polymerase family A KW556_RS22630 PF01612 3'-5' exonuclease KW556_RS22640 PF06005 Cell division protein ZapB KW556_RS22650 PF00132 Bacterial transferase hexapeptide (six repeats) KW556_RS22650 PF06426 Serine acetyltransferase, N-terminal KW556_RS22655 PF01545 Cation efflux family KW556_RS22655 PF16916 Dimerisation domain of Zinc Transporter KW556_RS22660 PF00072 Response regulator receiver domain KW556_RS22660 PF00486 Transcriptional regulatory protein, C terminal KW556_RS22665 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS22665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS22665 PF16527 Two-component sensor protein CpxA, periplasmic domain KW556_RS22665 PF00672 HAMP domain KW556_RS22670 PF00588 SpoU rRNA Methylase family KW556_RS22675 PF01554 MatE KW556_RS22680 PF02630 SCO1/SenC KW556_RS22695 PF01726 LexA DNA binding domain KW556_RS22695 PF00717 Peptidase S24-like KW556_RS22700 PF01553 Acyltransferase KW556_RS22705 PF01040 UbiA prenyltransferase family KW556_RS22710 PF04345 Chorismate lyase KW556_RS22735 PF00107 Zinc-binding dehydrogenase KW556_RS22735 PF08240 Alcohol dehydrogenase GroES-like domain KW556_RS22740 PF00356 Bacterial regulatory proteins, lacI family KW556_RS22740 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KW556_RS22745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KW556_RS22755 PF03611 PTS system sugar-specific permease component KW556_RS22760 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KW556_RS22765 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KW556_RS22770 PF00535 Glycosyl transferase family 2 KW556_RS22775 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KW556_RS22780 PF01467 Cytidylyltransferase-like KW556_RS22785 PF04393 Protein of unknown function (DUF535) KW556_RS22790 PF06827 Zinc finger found in FPG and IleRS KW556_RS22790 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KW556_RS22790 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KW556_RS22800 PF00471 Ribosomal protein L33 KW556_RS22805 PF00830 Ribosomal L28 family KW556_RS22810 PF04002 RadC-like JAB domain KW556_RS22815 PF04127 DNA / pantothenate metabolism flavoprotein KW556_RS22815 PF02441 Flavoprotein KW556_RS22820 PF00692 dUTPase KW556_RS22825 PF00440 Bacterial regulatory proteins, tetR family KW556_RS22830 PF05552 Conserved TM helix KW556_RS22830 PF00924 Mechanosensitive ion channel KW556_RS22835 PF00342 Phosphoglucose isomerase KW556_RS22840 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KW556_RS22840 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KW556_RS22845 PF03466 LysR substrate binding domain KW556_RS22845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KW556_RS22860 PF13380 CoA binding domain KW556_RS22860 PF13607 Succinyl-CoA ligase like flavodoxin domain KW556_RS22860 PF00583 Acetyltransferase (GNAT) family KW556_RS22890 PF12724 Flavodoxin domain KW556_RS22895 PF02386 Cation transport protein KW556_RS22900 PF09186 Domain of unknown function (DUF1949) KW556_RS22900 PF01205 Uncharacterized protein family UPF0029 KW556_RS22905 PF00557 Metallopeptidase family M24 KW556_RS22910 PF00501 AMP-binding enzyme KW556_RS22910 PF13193 AMP-binding enzyme C-terminal domain KW556_RS22915 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KW556_RS22915 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KW556_RS22915 PF00378 Enoyl-CoA hydratase/isomerase KW556_RS22920 PF02803 Thiolase, C-terminal domain KW556_RS22920 PF00108 Thiolase, N-terminal domain KW556_RS22925 PF00072 Response regulator receiver domain KW556_RS22925 PF00486 Transcriptional regulatory protein, C terminal KW556_RS22930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS22930 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS22930 PF00672 HAMP domain KW556_RS22935 PF01547 Bacterial extracellular solute-binding protein KW556_RS22945 PF01206 Sulfurtransferase TusA KW556_RS22950 PF01042 Endoribonuclease L-PSP KW556_RS22955 PF13488 Glycine zipper KW556_RS22955 PF00691 OmpA family KW556_RS22960 PF03352 Methyladenine glycosylase KW556_RS22965 PF02091 Glycyl-tRNA synthetase alpha subunit KW556_RS22970 PF05746 DALR anticodon binding domain KW556_RS22970 PF02092 Glycyl-tRNA synthetase beta subunit KW556_RS22975 PF13614 AAA domain KW556_RS23000 PF01609 Transposase DDE domain KW556_RS23005 PF03707 Bacterial signalling protein N terminal repeat KW556_RS23005 PF00563 EAL domain KW556_RS23005 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS23010 PF03496 ADP-ribosyltransferase exoenzyme KW556_RS23010 PF03545 Yersinia virulence determinant (YopE) KW556_RS23015 PF05932 Tir chaperone protein (CesT) family KW556_RS23025 PF02743 Cache domain KW556_RS23025 PF00672 HAMP domain KW556_RS23025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS23030 PF00356 Bacterial regulatory proteins, lacI family KW556_RS23035 PF13458 Periplasmic binding protein KW556_RS23040 PF02653 Branched-chain amino acid transport system / permease component KW556_RS23045 PF02653 Branched-chain amino acid transport system / permease component KW556_RS23045 PF11862 Domain of unknown function (DUF3382) KW556_RS23050 PF00005 ABC transporter KW556_RS23050 PF12399 Branched-chain amino acid ATP-binding cassette transporter KW556_RS23055 PF00005 ABC transporter KW556_RS23060 PF00581 Rhodanese-like domain KW556_RS23065 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease KW556_RS23065 PF01694 Rhomboid family KW556_RS23070 PF04380 Membrane fusogenic activity KW556_RS23075 PF08448 PAS fold KW556_RS23075 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS23075 PF08447 PAS fold KW556_RS23075 PF00563 EAL domain KW556_RS23080 PF00175 Oxidoreductase NAD-binding domain KW556_RS23085 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase KW556_RS23095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KW556_RS23095 PF07498 Rho termination factor, N-terminal domain KW556_RS23095 PF07497 Rho termination factor, RNA-binding domain KW556_RS23100 PF00085 Thioredoxin KW556_RS23105 PF00271 Helicase conserved C-terminal domain KW556_RS23105 PF00270 DEAD/DEAH box helicase KW556_RS23110 PF02541 Ppx/GppA phosphatase family KW556_RS23120 PF04445 Putative SAM-dependent methyltransferase KW556_RS23125 PF03707 Bacterial signalling protein N terminal repeat KW556_RS23125 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS23125 PF00563 EAL domain KW556_RS23130 PF01432 Peptidase family M3 KW556_RS23140 PF00490 Delta-aminolevulinic acid dehydratase KW556_RS23145 PF01026 TatD related DNase KW556_RS23150 PF00902 Sec-independent protein translocase protein (TatC) KW556_RS23155 PF02416 mttA/Hcf106 family KW556_RS23160 PF02416 mttA/Hcf106 family KW556_RS23165 PF03109 ABC1 family KW556_RS23170 PF02036 SCP-2 sterol transfer family KW556_RS23175 PF01209 ubiE/COQ5 methyltransferase family KW556_RS23180 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KW556_RS23185 PF07969 Amidohydrolase family KW556_RS23190 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KW556_RS23230 PF03544 Gram-negative bacterial TonB protein C-terminal KW556_RS23235 PF02472 Biopolymer transport protein ExbD/TolR KW556_RS23240 PF01618 MotA/TolQ/ExbB proton channel family KW556_RS23245 PF01618 MotA/TolQ/ExbB proton channel family KW556_RS23255 PF00196 Bacterial regulatory proteins, luxR family KW556_RS23255 PF03472 Autoinducer binding domain KW556_RS23265 PF00571 CBS domain KW556_RS23265 PF01380 SIS domain KW556_RS23270 PF08220 DeoR-like helix-turn-helix domain KW556_RS23270 PF00455 DeoR C terminal sensor domain KW556_RS23280 PF00106 short chain dehydrogenase KW556_RS23285 PF03829 PTS system glucitol/sorbitol-specific IIA component KW556_RS23290 PF07663 Sorbitol phosphotransferase enzyme II C-terminus KW556_RS23290 PF03612 Sorbitol phosphotransferase enzyme II N-terminus KW556_RS23295 PF03608 PTS system enzyme II sorbitol-specific factor KW556_RS23310 PF18623 TnsE C-terminal domain KW556_RS23320 PF15978 Tn7-like transposition protein D KW556_RS23320 PF06527 TniQ KW556_RS23325 PF13401 AAA domain KW556_RS23325 PF11426 Tn7 transposition regulator TnsC KW556_RS23330 PF00665 Integrase core domain KW556_RS23335 PF08721 TnsA endonuclease C terminal KW556_RS23335 PF08722 TnsA endonuclease N terminal KW556_RS23340 PF01380 SIS domain KW556_RS23345 PF00455 DeoR C terminal sensor domain KW556_RS23345 PF08220 DeoR-like helix-turn-helix domain KW556_RS23350 PF00072 Response regulator receiver domain KW556_RS23350 PF00486 Transcriptional regulatory protein, C terminal KW556_RS23355 PF00672 HAMP domain KW556_RS23355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KW556_RS23355 PF00512 His Kinase A (phospho-acceptor) domain KW556_RS23360 PF00905 Penicillin binding protein transpeptidase domain KW556_RS23370 PF06123 Inner membrane protein CreD KW556_RS23375 PF14602 Hexapeptide repeat of succinyl-transferase KW556_RS23375 PF00132 Bacterial transferase hexapeptide (six repeats) KW556_RS23375 PF12804 MobA-like NTP transferase domain KW556_RS23380 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KW556_RS23380 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KW556_RS23385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KW556_RS23385 PF02874 ATP synthase alpha/beta family, beta-barrel domain KW556_RS23390 PF00231 ATP synthase KW556_RS23395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KW556_RS23395 PF00306 ATP synthase alpha/beta chain, C terminal domain KW556_RS23395 PF02874 ATP synthase alpha/beta family, beta-barrel domain KW556_RS23400 PF00213 ATP synthase delta (OSCP) subunit KW556_RS23405 PF00430 ATP synthase B/B' CF(0) KW556_RS23410 PF00137 ATP synthase subunit C KW556_RS23415 PF00119 ATP synthase A chain KW556_RS23425 PF02195 ParB-like nuclease domain KW556_RS23425 PF17762 HTH domain found in ParB protein KW556_RS23430 PF13614 AAA domain KW556_RS23435 PF02527 rRNA small subunit methyltransferase G KW556_RS23440 PF01134 Glucose inhibited division protein A KW556_RS23440 PF13932 GidA associated domain KW556_RS23445 PF00258 Flavodoxin KW556_RS23450 PF07715 TonB-dependent Receptor Plug Domain KW556_RS23450 PF00593 TonB dependent receptor KW556_RS23455 PF00005 ABC transporter KW556_RS23460 PF00005 ABC transporter KW556_RS23465 PF13700 Domain of unknown function (DUF4158) KW556_RS23465 PF01526 Tn3 transposase DDE domain KW556_RS23470 PF02796 Helix-turn-helix domain of resolvase KW556_RS23470 PF00239 Resolvase, N terminal domain KW556_RS23475 PF01497 Periplasmic binding protein KW556_RS23480 PF01032 FecCD transport family KW556_RS23485 PF07804 HipA-like C-terminal domain KW556_RS23485 PF13657 HipA N-terminal domain KW556_RS23505 PF02796 Helix-turn-helix domain of resolvase KW556_RS23505 PF00239 Resolvase, N terminal domain KW556_RS23510 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ KW556_RS23515 PF03707 Bacterial signalling protein N terminal repeat KW556_RS23515 PF00990 Diguanylate cyclase, GGDEF domain KW556_RS23515 PF00563 EAL domain KW556_RS23520 PF13407 Periplasmic binding protein domain KW556_RS23550 PF00239 Resolvase, N terminal domain KW556_RS23550 PF02796 Helix-turn-helix domain of resolvase KW556_RS23590 PF02899 Phage integrase, N-terminal SAM-like domain KW556_RS23590 PF00589 Phage integrase family KW556_RS23595 PF10396 GTP-binding protein TrmE N-terminus KW556_RS23595 PF01926 50S ribosome-binding GTPase KW556_RS23595 PF12631 MnmE helical domain KW556_RS23600 PF02096 60Kd inner membrane protein KW556_RS23600 PF14849 YidC periplasmic domain KW556_RS23605 PF01809 Putative membrane protein insertion efficiency factor KW556_RS23610 PF00825 Ribonuclease P KW556_RS23615 PF00468 Ribosomal protein L34 KW556_RS23625 PF00528 Binding-protein-dependent transport system inner membrane component KW556_RS23630 PF00497 Bacterial extracellular solute-binding proteins, family 3 KW556_RS23645 PF00239 Resolvase, N terminal domain KW556_RS23645 PF02796 Helix-turn-helix domain of resolvase KW556_RS23650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KW556_RS23650 PF00672 HAMP domain KW556_RS23675 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KW556_RS23680 PF04221 RelB antitoxin KW556_RS23685 PF13614 AAA domain KW556_RS23715 PF01526 Tn3 transposase DDE domain KW556_RS23715 PF13700 Domain of unknown function (DUF4158) KW556_RS23720 PF00239 Resolvase, N terminal domain KW556_RS23720 PF02796 Helix-turn-helix domain of resolvase KW556_RS23740 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KW556_RS23740 PF00171 Aldehyde dehydrogenase family KW556_RS23740 PF01619 Proline dehydrogenase KW556_RS23740 PF14850 DNA-binding domain of Proline dehydrogenase KW556_RS23780 PF00239 Resolvase, N terminal domain KW556_RS23780 PF02796 Helix-turn-helix domain of resolvase KW556_RS23795 PF01526 Tn3 transposase DDE domain KW556_RS23795 PF13700 Domain of unknown function (DUF4158) KW556_RS23805 PF00403 Heavy-metal-associated domain KW556_RS23910 PF00376 MerR family regulatory protein KW556_RS23910 PF09278 MerR, DNA binding KW556_RS23930 PF00929 Exonuclease KW556_RS23945 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KW556_RS23960 PF03432 Relaxase/Mobilisation nuclease domain KW556_RS24025 PF00239 Resolvase, N terminal domain KW556_RS24025 PF02796 Helix-turn-helix domain of resolvase KW556_RS24035 PF01609 Transposase DDE domain KW556_RS24045 PF01609 Transposase DDE domain KW556_RS24060 PF01641 SelR domain KW556_RS24065 PF01625 Peptide methionine sulfoxide reductase KW556_RS24070 PF00043 Glutathione S-transferase, C-terminal domain KW556_RS24070 PF02798 Glutathione S-transferase, N-terminal domain KW556_RS24095 PF13614 AAA domain KW556_RS24095 PF00376 MerR family regulatory protein