locus-tag class description M001_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix M001_RS00005 PF00308 Bacterial dnaA protein M001_RS00005 PF11638 DnaA N-terminal domain M001_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M001_RS00010 PF02767 DNA polymerase III beta subunit, central domain M001_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M001_RS00015 PF02463 RecF/RecN/SMC N terminal domain M001_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus M001_RS00020 PF00204 DNA gyrase B M001_RS00020 PF18053 DNA gyrase B subunit insert domain M001_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS00020 PF01751 Toprim domain M001_RS00030 PF13280 WYL domain M001_RS00030 PF08279 HTH domain M001_RS00035 PF02311 AraC-like ligand binding domain M001_RS00035 PF12833 Helix-turn-helix domain M001_RS00040 PF12706 Beta-lactamase superfamily domain M001_RS00045 PF00011 Hsp20/alpha crystallin family M001_RS00050 PF00011 Hsp20/alpha crystallin family M001_RS00055 PF00155 Aminotransferase class I and II M001_RS00070 PF07690 Major Facilitator Superfamily M001_RS00075 PF00072 Response regulator receiver domain M001_RS00075 PF00486 Transcriptional regulatory protein, C terminal M001_RS00080 PF00512 His Kinase A (phospho-acceptor) domain M001_RS00080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS00080 PF13492 GAF domain M001_RS00080 PF13493 Domain of unknown function (DUF4118) M001_RS00080 PF02702 Osmosensitive K+ channel His kinase sensor domain M001_RS00085 PF02669 K+-transporting ATPase, c chain M001_RS00095 PF03814 Potassium-transporting ATPase A subunit M001_RS00100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M001_RS00100 PF07992 Pyridine nucleotide-disulphide oxidoreductase M001_RS00105 PF00512 His Kinase A (phospho-acceptor) domain M001_RS00105 PF00497 Bacterial extracellular solute-binding proteins, family 3 M001_RS00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS00110 PF00873 AcrB/AcrD/AcrF family M001_RS00115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M001_RS00120 PF00440 Bacterial regulatory proteins, tetR family M001_RS00155 PF12146 Serine aminopeptidase, S33 M001_RS00160 PF00132 Bacterial transferase hexapeptide (six repeats) M001_RS00165 PF00588 SpoU rRNA Methylase family M001_RS00165 PF12105 SpoU, rRNA methylase, C-terminal M001_RS00170 PF04607 Region found in RelA / SpoT proteins M001_RS00170 PF02824 TGS domain M001_RS00170 PF13291 ACT domain M001_RS00175 PF01192 RNA polymerase Rpb6 M001_RS00180 PF00625 Guanylate kinase M001_RS00185 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M001_RS00200 PF00892 EamA-like transporter family M001_RS00220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS00220 PF03466 LysR substrate binding domain M001_RS00225 PF00579 tRNA synthetases class I (W and Y) M001_RS00230 PF00582 Universal stress protein family M001_RS00235 PF07055 Enoyl reductase FAD binding domain M001_RS00235 PF12241 Trans-2-enoyl-CoA reductase catalytic region M001_RS00235 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase M001_RS00240 PF00210 Ferritin-like domain M001_RS00250 PF07694 5TMR of 5TMR-LYT M001_RS00250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS00250 PF06580 Histidine kinase M001_RS00255 PF00072 Response regulator receiver domain M001_RS00255 PF04397 LytTr DNA-binding domain M001_RS00260 PF07690 Major Facilitator Superfamily M001_RS00285 PF13533 Biotin-lipoyl like M001_RS00295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M001_RS00300 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M001_RS00300 PF02222 ATP-grasp domain M001_RS00305 PF00731 AIR carboxylase M001_RS00320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS00320 PF03466 LysR substrate binding domain M001_RS00325 PF00593 TonB dependent receptor M001_RS00325 PF07715 TonB-dependent Receptor Plug Domain M001_RS00330 PF01177 Asp/Glu/Hydantoin racemase M001_RS00365 PF00899 ThiF family M001_RS00370 PF02657 Fe-S metabolism associated domain M001_RS00375 PF00266 Aminotransferase class-V M001_RS00380 PF13361 UvrD-like helicase C-terminal domain M001_RS00380 PF00580 UvrD/REP helicase N-terminal domain M001_RS00385 PF03707 Bacterial signalling protein N terminal repeat M001_RS00385 PF00990 Diguanylate cyclase, GGDEF domain M001_RS00385 PF00563 EAL domain M001_RS00390 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M001_RS00395 PF00107 Zinc-binding dehydrogenase M001_RS00395 PF08240 Alcohol dehydrogenase GroES-like domain M001_RS00400 PF00155 Aminotransferase class I and II M001_RS00405 PF08360 QacR-like protein, C-terminal region M001_RS00405 PF00440 Bacterial regulatory proteins, tetR family M001_RS00410 PF01370 NAD dependent epimerase/dehydratase family M001_RS00415 PF00534 Glycosyl transferases group 1 M001_RS00425 PF04932 O-Antigen ligase M001_RS00430 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) M001_RS00460 PF12833 Helix-turn-helix domain M001_RS00460 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M001_RS00465 PF01810 LysE type translocator M001_RS00490 PF14001 YdfZ protein M001_RS00500 PF13614 AAA domain M001_RS00510 PF13361 UvrD-like helicase C-terminal domain M001_RS00510 PF00580 UvrD/REP helicase N-terminal domain M001_RS00535 PF02872 5'-nucleotidase, C-terminal domain M001_RS00535 PF00149 Calcineurin-like phosphoesterase M001_RS00545 PF00571 CBS domain M001_RS00545 PF01769 Divalent cation transporter M001_RS00545 PF03448 MgtE intracellular N domain M001_RS00550 PF10414 Sirohaem synthase dimerisation region M001_RS00550 PF14824 Sirohaem biosynthesis protein central M001_RS00550 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M001_RS00555 PF01226 Formate/nitrite transporter M001_RS00560 PF13806 Rieske-like [2Fe-2S] domain M001_RS00565 PF07992 Pyridine nucleotide-disulphide oxidoreductase M001_RS00565 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M001_RS00565 PF18267 Rubredoxin NAD+ reductase C-terminal domain M001_RS00565 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M001_RS00565 PF04324 BFD-like [2Fe-2S] binding domain M001_RS00570 PF10431 C-terminal, D2-small domain, of ClpB protein M001_RS00570 PF07724 AAA domain (Cdc48 subfamily) M001_RS00570 PF00004 ATPase family associated with various cellular activities (AAA) M001_RS00575 PF00227 Proteasome subunit M001_RS00585 PF03485 Arginyl tRNA synthetase N terminal domain M001_RS00585 PF05746 DALR anticodon binding domain M001_RS00585 PF00750 tRNA synthetases class I (R) M001_RS00595 PF04545 Sigma-70, region 4 M001_RS00595 PF04542 Sigma-70 region 2 M001_RS00605 PF02673 Bacitracin resistance protein BacA M001_RS00610 PF01263 Aldose 1-epimerase M001_RS00615 PF00288 GHMP kinases N terminal domain M001_RS00615 PF10509 Galactokinase galactose-binding signature M001_RS00615 PF08544 GHMP kinases C terminal M001_RS00620 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain M001_RS00620 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain M001_RS00625 PF16363 GDP-mannose 4,6 dehydratase M001_RS00630 PF00356 Bacterial regulatory proteins, lacI family M001_RS00635 PF02929 Beta galactosidase small chain M001_RS00635 PF02837 Glycosyl hydrolases family 2, sugar binding domain M001_RS00635 PF00703 Glycosyl hydrolases family 2 M001_RS00635 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M001_RS00635 PF16353 Domain of unknown function(DUF4981) M001_RS00640 PF13407 Periplasmic binding protein domain M001_RS00645 PF00005 ABC transporter M001_RS00650 PF02653 Branched-chain amino acid transport system / permease component M001_RS00655 PF00672 HAMP domain M001_RS00655 PF02743 Cache domain M001_RS00655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS00660 PF05958 tRNA (Uracil-5-)-methyltransferase M001_RS00675 PF02903 Alpha amylase, N-terminal ig-like domain M001_RS00675 PF00128 Alpha amylase, catalytic domain M001_RS00690 PF00012 Hsp70 protein M001_RS00695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M001_RS00695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M001_RS00700 PF05981 CreA protein M001_RS00715 PF01258 Prokaryotic dksA/traR C4-type zinc finger M001_RS00720 PF00120 Glutamine synthetase, catalytic domain M001_RS00725 PF00202 Aminotransferase class-III M001_RS00730 PF13416 Bacterial extracellular solute-binding protein M001_RS00735 PF13416 Bacterial extracellular solute-binding protein M001_RS00740 PF08402 TOBE domain M001_RS00740 PF00005 ABC transporter M001_RS00745 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS00750 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS00755 PF03475 3-alpha domain M001_RS00755 PF03473 MOSC domain M001_RS00770 PF03061 Thioesterase superfamily M001_RS00775 PF00570 HRDC domain M001_RS00775 PF16124 RecQ zinc-binding M001_RS00775 PF00271 Helicase conserved C-terminal domain M001_RS00775 PF09382 RQC domain M001_RS00775 PF00270 DEAD/DEAH box helicase M001_RS00780 PF00034 Cytochrome c M001_RS00785 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M001_RS00795 PF02592 Putative vitamin uptake transporter M001_RS00800 PF03737 Aldolase/RraA M001_RS00805 PF00672 HAMP domain M001_RS00805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS00815 PF01197 Ribosomal protein L31 M001_RS00820 PF17764 3′ DNA-binding domain (3′BD) M001_RS00820 PF00271 Helicase conserved C-terminal domain M001_RS00820 PF18074 Primosomal protein N C-terminal domain M001_RS00820 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M001_RS00820 PF00270 DEAD/DEAH box helicase M001_RS00830 PF13460 NAD(P)H-binding M001_RS00830 PF11066 Protein of unknown function (DUF2867) M001_RS00835 PF03222 Tryptophan/tyrosine permease family M001_RS00840 PF03949 Malic enzyme, NAD binding domain M001_RS00840 PF00390 Malic enzyme, N-terminal domain M001_RS00845 PF03631 Virulence factor BrkB M001_RS00850 PF02580 D-Tyr-tRNA(Tyr) deacylase M001_RS00855 PF17284 Spermidine synthase tetramerisation domain M001_RS00860 PF09500 Putative thioesterase (yiiD_Cterm) M001_RS00860 PF00583 Acetyltransferase (GNAT) family M001_RS00870 PF00271 Helicase conserved C-terminal domain M001_RS00870 PF00270 DEAD/DEAH box helicase M001_RS00870 PF17191 RecG wedge domain M001_RS00875 PF13091 PLD-like domain M001_RS00880 PF02447 GntP family permease M001_RS00885 PF01202 Shikimate kinase M001_RS00890 PF00920 Dehydratase family M001_RS00895 PF01081 KDPG and KHG aldolase M001_RS00900 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M001_RS00900 PF00356 Bacterial regulatory proteins, lacI family M001_RS00910 PF01551 Peptidase family M23 M001_RS00915 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M001_RS00915 PF01676 Metalloenzyme superfamily M001_RS00920 PF00581 Rhodanese-like domain M001_RS00925 PF02556 Preprotein translocase subunit SecB M001_RS00930 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M001_RS00930 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M001_RS00935 PF01521 Iron-sulphur cluster biosynthesis M001_RS00935 PF01106 NifU-like domain M001_RS00940 PF00156 Phosphoribosyl transferase domain M001_RS00945 PF00561 alpha/beta hydrolase fold M001_RS00965 PF16921 Tex protein YqgF-like domain M001_RS00965 PF00575 S1 RNA binding domain M001_RS00965 PF09371 Tex-like protein N-terminal domain M001_RS00965 PF17674 HHH domain M001_RS00970 PF01272 Transcription elongation factor, GreA/GreB, C-term M001_RS00970 PF03449 Transcription elongation factor, N-terminal M001_RS00975 PF00486 Transcriptional regulatory protein, C terminal M001_RS00975 PF00072 Response regulator receiver domain M001_RS00980 PF00512 His Kinase A (phospho-acceptor) domain M001_RS00980 PF00672 HAMP domain M001_RS00980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS00990 PF00338 Ribosomal protein S10p/S20e M001_RS00995 PF00297 Ribosomal protein L3 M001_RS01000 PF00573 Ribosomal protein L4/L1 family M001_RS01005 PF00276 Ribosomal protein L23 M001_RS01010 PF03947 Ribosomal Proteins L2, C-terminal domain M001_RS01010 PF00181 Ribosomal Proteins L2, RNA binding domain M001_RS01015 PF00203 Ribosomal protein S19 M001_RS01020 PF00237 Ribosomal protein L22p/L17e M001_RS01025 PF00189 Ribosomal protein S3, C-terminal domain M001_RS01025 PF07650 KH domain M001_RS01030 PF00252 Ribosomal protein L16p/L10e M001_RS01035 PF00831 Ribosomal L29 protein M001_RS01040 PF00366 Ribosomal protein S17 M001_RS01045 PF00238 Ribosomal protein L14p/L23e M001_RS01050 PF00467 KOW motif M001_RS01050 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M001_RS01055 PF00673 ribosomal L5P family C-terminus M001_RS01055 PF00281 Ribosomal protein L5 M001_RS01060 PF00253 Ribosomal protein S14p/S29e M001_RS01065 PF00410 Ribosomal protein S8 M001_RS01070 PF00347 Ribosomal protein L6 M001_RS01075 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M001_RS01080 PF00333 Ribosomal protein S5, N-terminal domain M001_RS01080 PF03719 Ribosomal protein S5, C-terminal domain M001_RS01085 PF00327 Ribosomal protein L30p/L7e M001_RS01090 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M001_RS01095 PF00344 SecY translocase M001_RS01100 PF00444 Ribosomal protein L36 M001_RS01105 PF00416 Ribosomal protein S13/S18 M001_RS01110 PF00411 Ribosomal protein S11 M001_RS01115 PF01479 S4 domain M001_RS01115 PF00163 Ribosomal protein S4/S9 N-terminal domain M001_RS01120 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M001_RS01120 PF01000 RNA polymerase Rpb3/RpoA insert domain M001_RS01120 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M001_RS01125 PF01196 Ribosomal protein L17 M001_RS01165 PF07715 TonB-dependent Receptor Plug Domain M001_RS01165 PF00593 TonB dependent receptor M001_RS01170 PF17151 Periplasmic sensor domain M001_RS01170 PF00990 Diguanylate cyclase, GGDEF domain M001_RS01175 PF00672 HAMP domain M001_RS01175 PF00512 His Kinase A (phospho-acceptor) domain M001_RS01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS01180 PF00486 Transcriptional regulatory protein, C terminal M001_RS01180 PF00072 Response regulator receiver domain M001_RS01195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS01195 PF03466 LysR substrate binding domain M001_RS01205 PF17954 Quercetinase C-terminal cupin domain M001_RS01205 PF02678 Pirin M001_RS01210 PF07681 DoxX M001_RS01215 PF17946 RecC C-terminal domain M001_RS01220 PF12705 PD-(D/E)XK nuclease superfamily M001_RS01220 PF13361 UvrD-like helicase C-terminal domain M001_RS01220 PF00580 UvrD/REP helicase N-terminal domain M001_RS01225 PF13538 UvrD-like helicase C-terminal domain M001_RS01240 PF00990 Diguanylate cyclase, GGDEF domain M001_RS01240 PF08448 PAS fold M001_RS01255 PF00392 Bacterial regulatory proteins, gntR family M001_RS01255 PF07702 UTRA domain M001_RS01270 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS01280 PF00005 ABC transporter M001_RS01280 PF08402 TOBE domain M001_RS01290 PF00990 Diguanylate cyclase, GGDEF domain M001_RS01310 PF01053 Cys/Met metabolism PLP-dependent enzyme M001_RS01320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M001_RS01320 PF12793 Sugar transport-related sRNA regulator N-term M001_RS01325 PF00141 Peroxidase M001_RS01340 PF03280 Proteobacterial lipase chaperone protein M001_RS01345 PF00561 alpha/beta hydrolase fold M001_RS01350 PF01479 S4 domain M001_RS01350 PF00579 tRNA synthetases class I (W and Y) M001_RS01355 PF00196 Bacterial regulatory proteins, luxR family M001_RS01375 PF00199 Catalase M001_RS01375 PF06628 Catalase-related immune-responsive M001_RS01400 PF08264 Anticodon-binding domain of tRNA M001_RS01400 PF00133 tRNA synthetases class I (I, L, M and V) M001_RS01400 PF10458 Valyl tRNA synthetase tRNA binding arm M001_RS01410 PF02789 Cytosol aminopeptidase family, N-terminal domain M001_RS01410 PF00883 Cytosol aminopeptidase family, catalytic domain M001_RS01415 PF03739 Lipopolysaccharide export system permease LptF/LptG M001_RS01420 PF03739 Lipopolysaccharide export system permease LptF/LptG M001_RS01440 PF00593 TonB dependent receptor M001_RS01440 PF07715 TonB-dependent Receptor Plug Domain M001_RS01450 PF00768 D-alanyl-D-alanine carboxypeptidase M001_RS01455 PF13520 Amino acid permease M001_RS01475 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded M001_RS01490 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase M001_RS01495 PF02602 Uroporphyrinogen-III synthase HemD M001_RS01500 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M001_RS01500 PF03900 Porphobilinogen deaminase, C-terminal domain M001_RS01505 PF01295 Adenylate cyclase, class-I M001_RS01505 PF12633 Adenylate cyclase NT domain M001_RS01510 PF02230 Phospholipase/Carboxylesterase M001_RS01515 PF01491 Frataxin-like domain M001_RS01525 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M001_RS01525 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M001_RS01530 PF01678 Diaminopimelate epimerase M001_RS01540 PF02899 Phage integrase, N-terminal SAM-like domain M001_RS01540 PF00589 Phage integrase family M001_RS01545 PF13419 Haloacid dehalogenase-like hydrolase M001_RS01555 PF00027 Cyclic nucleotide-binding domain M001_RS01555 PF13545 Crp-like helix-turn-helix domain M001_RS01565 PF07722 Peptidase C26 M001_RS01570 PF04751 Protein of unknown function (DUF615) M001_RS01575 PF01523 Putative modulator of DNA gyrase M001_RS01580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M001_RS01585 PF01722 BolA-like protein M001_RS01595 PF05494 MlaC protein M001_RS01600 PF02470 MlaD protein M001_RS01605 PF02405 Permease MlaE M001_RS01610 PF00005 ABC transporter M001_RS01615 PF00571 CBS domain M001_RS01615 PF01380 SIS domain M001_RS01625 PF06835 Lipopolysaccharide-assembly, LptC-related M001_RS01630 PF03968 OstA-like protein M001_RS01635 PF12399 Branched-chain amino acid ATP-binding cassette transporter M001_RS01635 PF00005 ABC transporter M001_RS01640 PF00309 Sigma-54 factor, Activator interacting domain (AID) M001_RS01640 PF04963 Sigma-54 factor, core binding domain M001_RS01640 PF04552 Sigma-54, DNA binding domain M001_RS01645 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M001_RS01650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M001_RS01655 PF03668 P-loop ATPase protein family M001_RS01660 PF00381 PTS HPr component phosphorylation site M001_RS01665 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M001_RS01665 PF08279 HTH domain M001_RS01665 PF05043 Mga helix-turn-helix domain M001_RS01665 PF00874 PRD domain M001_RS01670 PF07071 KDGP aldolase M001_RS01675 PF03841 L-seryl-tRNA selenium transferase M001_RS01680 PF01979 Amidohydrolase family M001_RS01710 PF13180 PDZ domain M001_RS01715 PF13180 PDZ domain M001_RS01715 PF00595 PDZ domain M001_RS01725 PF03969 AFG1-like ATPase M001_RS01730 PF00572 Ribosomal protein L13 M001_RS01735 PF00380 Ribosomal protein S9/S16 M001_RS01740 PF00355 Rieske [2Fe-2S] domain M001_RS01740 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal M001_RS01745 PF00032 Cytochrome b(C-terminal)/b6/petD M001_RS01745 PF00033 Cytochrome b/b6/petB M001_RS01750 PF02167 Cytochrome C1 family M001_RS01755 PF02798 Glutathione S-transferase, N-terminal domain M001_RS01755 PF00043 Glutathione S-transferase, C-terminal domain M001_RS01760 PF04386 Stringent starvation protein B M001_RS01765 PF04972 BON domain M001_RS01770 PF13580 SIS domain M001_RS01775 PF02021 Uncharacterised protein family UPF0102 M001_RS01780 PF04348 LppC putative lipoprotein M001_RS01785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M001_RS01800 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M001_RS01805 PF00813 FliP family M001_RS01810 PF01313 Bacterial export proteins, family 3 M001_RS01815 PF01311 Bacterial export proteins, family 1 M001_RS01820 PF01312 FlhB HrpN YscU SpaS Family M001_RS01825 PF00771 FHIPEP family M001_RS01830 PF00158 Sigma-54 interaction domain M001_RS01830 PF02954 Bacterial regulatory protein, Fis family M001_RS01830 PF00072 Response regulator receiver domain M001_RS01835 PF02049 Flagellar hook-basal body complex protein FliE M001_RS01840 PF01514 Secretory protein of YscJ/FliF family M001_RS01840 PF08345 Flagellar M-ring protein C-terminal M001_RS01845 PF14841 FliG middle domain M001_RS01845 PF14842 FliG N-terminal domain M001_RS01845 PF01706 FliG C-terminal domain M001_RS01855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M001_RS01855 PF18269 T3SS EscN ATPase C-terminal domain M001_RS01880 PF00460 Flagella basal body rod protein M001_RS01885 PF00460 Flagella basal body rod protein M001_RS01885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M001_RS01890 PF03963 Flagellar hook capping protein - N-terminal region M001_RS01890 PF13860 FlgD Ig-like domain M001_RS01890 PF13861 FlgD Tudor-like domain M001_RS01895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M001_RS01895 PF00460 Flagella basal body rod protein M001_RS01895 PF07559 Flagellar basal body protein FlaE M001_RS01900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M001_RS01900 PF00460 Flagella basal body rod protein M001_RS01905 PF00460 Flagella basal body rod protein M001_RS01905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M001_RS01910 PF02107 Flagellar L-ring protein M001_RS01915 PF02119 Flagellar P-ring protein M001_RS01925 PF00460 Flagella basal body rod protein M001_RS01925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M001_RS01930 PF00669 Bacterial flagellin N-terminal helical region M001_RS01950 PF00669 Bacterial flagellin N-terminal helical region M001_RS01950 PF00700 Bacterial flagellin C-terminal helical region M001_RS01955 PF00700 Bacterial flagellin C-terminal helical region M001_RS01955 PF00669 Bacterial flagellin N-terminal helical region M001_RS01960 PF07195 Flagellar hook-associated protein 2 C-terminus M001_RS01960 PF02465 Flagellar hook-associated protein 2 N-terminus M001_RS01960 PF07196 Flagellin hook IN motif M001_RS01965 PF02561 Flagellar protein FliS M001_RS01985 PF04545 Sigma-70, region 4 M001_RS01985 PF04542 Sigma-70 region 2 M001_RS01990 PF01618 MotA/TolQ/ExbB proton channel family M001_RS01995 PF00691 OmpA family M001_RS01995 PF13677 Membrane MotB of proton-channel complex MotA/MotB M001_RS02005 PF01464 Transglycosylase SLT domain M001_RS02005 PF01476 LysM domain M001_RS02010 PF02381 MraZ protein, putative antitoxin-like M001_RS02015 PF01795 MraW methylase family M001_RS02020 PF04999 Cell division protein FtsL M001_RS02025 PF03717 Penicillin-binding Protein dimerisation domain M001_RS02025 PF00905 Penicillin binding protein transpeptidase domain M001_RS02030 PF02875 Mur ligase family, glutamate ligase domain M001_RS02030 PF01225 Mur ligase family, catalytic domain M001_RS02030 PF08245 Mur ligase middle domain M001_RS02035 PF08245 Mur ligase middle domain M001_RS02035 PF01225 Mur ligase family, catalytic domain M001_RS02035 PF02875 Mur ligase family, glutamate ligase domain M001_RS02040 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M001_RS02040 PF00953 Glycosyl transferase family 4 M001_RS02045 PF02875 Mur ligase family, glutamate ligase domain M001_RS02045 PF08245 Mur ligase middle domain M001_RS02050 PF01098 Cell cycle protein M001_RS02055 PF03033 Glycosyltransferase family 28 N-terminal domain M001_RS02055 PF04101 Glycosyltransferase family 28 C-terminal domain M001_RS02060 PF08245 Mur ligase middle domain M001_RS02060 PF01225 Mur ligase family, catalytic domain M001_RS02060 PF02875 Mur ligase family, glutamate ligase domain M001_RS02065 PF08478 POTRA domain, FtsQ-type M001_RS02065 PF03799 Cell division protein FtsQ M001_RS02070 PF02491 SHS2 domain inserted in FTSA M001_RS02075 PF00091 Tubulin/FtsZ family, GTPase domain M001_RS02075 PF12327 FtsZ family, C-terminal domain M001_RS02080 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M001_RS02090 PF07516 SecA Wing and Scaffold domain M001_RS02090 PF02810 SEC-C motif M001_RS02090 PF07517 SecA DEAD-like domain M001_RS02090 PF01043 SecA preprotein cross-linking domain M001_RS02095 PF00293 NUDIX domain M001_RS02100 PF03884 DNA gyrase inhibitor YacG M001_RS02105 PF07072 Cell division protein M001_RS02110 PF01121 Dephospho-CoA kinase M001_RS02115 PF01478 Type IV leader peptidase family M001_RS02115 PF06750 Bacterial Peptidase A24 N-terminal domain M001_RS02120 PF00482 Type II secretion system (T2SS), protein F M001_RS02125 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M001_RS02125 PF00437 Type II/IV secretion system protein M001_RS02130 PF07963 Prokaryotic N-terminal methylation motif M001_RS02135 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M001_RS02135 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M001_RS02145 PF01510 N-acetylmuramoyl-L-alanine amidase M001_RS02150 PF00392 Bacterial regulatory proteins, gntR family M001_RS02150 PF07729 FCD domain M001_RS02155 PF17831 Pyruvate dehydrogenase E1 component middle domain M001_RS02155 PF00456 Transketolase, thiamine diphosphate binding domain M001_RS02160 PF00364 Biotin-requiring enzyme M001_RS02160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M001_RS02160 PF02817 e3 binding domain M001_RS02165 PF07992 Pyridine nucleotide-disulphide oxidoreductase M001_RS02165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M001_RS02170 PF00563 EAL domain M001_RS02170 PF00990 Diguanylate cyclase, GGDEF domain M001_RS02170 PF03707 Bacterial signalling protein N terminal repeat M001_RS02175 PF12729 Four helix bundle sensory module for signal transduction M001_RS02175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS02175 PF00672 HAMP domain M001_RS02180 PF01734 Patatin-like phospholipase M001_RS02185 PF00330 Aconitase family (aconitate hydratase) M001_RS02185 PF11791 Aconitate B N-terminal domain M001_RS02185 PF06434 Aconitate hydratase 2 N-terminus M001_RS02190 PF00563 EAL domain M001_RS02190 PF12792 CSS motif domain associated with EAL M001_RS02200 PF02492 CobW/HypB/UreG, nucleotide-binding domain M001_RS02200 PF07683 Cobalamin synthesis protein cobW C-terminal domain M001_RS02205 PF00873 AcrB/AcrD/AcrF family M001_RS02220 PF07690 Major Facilitator Superfamily M001_RS02230 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M001_RS02235 PF02152 Dihydroneopterin aldolase M001_RS02240 PF02660 Glycerol-3-phosphate acyltransferase M001_RS02290 PF00206 Lyase M001_RS02290 PF14698 Argininosuccinate lyase C-terminal M001_RS02295 PF00764 Arginosuccinate synthase M001_RS02300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M001_RS02300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M001_RS02305 PF00696 Amino acid kinase family M001_RS02310 PF02774 Semialdehyde dehydrogenase, dimerisation domain M001_RS02310 PF01118 Semialdehyde dehydrogenase, NAD binding domain M001_RS02315 PF01546 Peptidase family M20/M25/M40 M001_RS02315 PF07687 Peptidase dimerisation domain M001_RS02320 PF00311 Phosphoenolpyruvate carboxylase M001_RS02330 PF04073 Aminoacyl-tRNA editing domain M001_RS02345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS02345 PF03466 LysR substrate binding domain M001_RS02350 PF03788 LrgA family M001_RS02355 PF04172 LrgB-like family M001_RS02365 PF01734 Patatin-like phospholipase M001_RS02370 PF05190 MutS family domain IV M001_RS02370 PF05188 MutS domain II M001_RS02370 PF00488 MutS domain V M001_RS02370 PF05192 MutS domain III M001_RS02370 PF01624 MutS domain I M001_RS02375 PF02464 Competence-damaged protein M001_RS02380 PF00154 recA bacterial DNA recombination protein M001_RS02385 PF02631 RecX family M001_RS02390 PF02272 DHHA1 domain M001_RS02390 PF01411 tRNA synthetases class II (A) M001_RS02390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M001_RS02395 PF00696 Amino acid kinase family M001_RS02395 PF01842 ACT domain M001_RS02395 PF13840 ACT domain M001_RS02400 PF02599 Global regulator protein family M001_RS02435 PF00768 D-alanyl-D-alanine carboxypeptidase M001_RS02440 PF09335 SNARE associated Golgi protein M001_RS02445 PF03471 Transporter associated domain M001_RS02445 PF00571 CBS domain M001_RS02445 PF01595 Cyclin M transmembrane N-terminal domain M001_RS02455 PF00710 Asparaginase, N-terminal M001_RS02455 PF17763 Glutaminase/Asparaginase C-terminal domain M001_RS02470 PF00356 Bacterial regulatory proteins, lacI family M001_RS02475 PF02378 Phosphotransferase system, EIIC M001_RS02475 PF00367 phosphotransferase system, EIIB M001_RS02480 PF11941 Domain of unknown function (DUF3459) M001_RS02480 PF00128 Alpha amylase, catalytic domain M001_RS02485 PF12464 Maltose acetyltransferase M001_RS02485 PF14602 Hexapeptide repeat of succinyl-transferase M001_RS02495 PF00849 RNA pseudouridylate synthase M001_RS02500 PF00271 Helicase conserved C-terminal domain M001_RS02500 PF12137 RNA polymerase recycling family C-terminal M001_RS02500 PF00176 SNF2 family N-terminal domain M001_RS02500 PF18339 RapA N-terminal Tudor like domain 1 M001_RS02500 PF18337 RapA N-terminal Tudor like domain M001_RS02530 PF13462 Thioredoxin M001_RS02530 PF06965 Na+/H+ antiporter 1 M001_RS02545 PF00202 Aminotransferase class-III M001_RS02550 PF00654 Voltage gated chloride channel M001_RS02560 PF01521 Iron-sulphur cluster biosynthesis M001_RS02565 PF03553 Na+/H+ antiporter family M001_RS02605 PF08323 Starch synthase catalytic domain M001_RS02605 PF00534 Glycosyl transferases group 1 M001_RS02610 PF00483 Nucleotidyl transferase M001_RS02615 PF05175 Methyltransferase small domain M001_RS02615 PF08468 Methyltransferase small domain N-terminal M001_RS02620 PF00701 Dihydrodipicolinate synthetase family M001_RS02630 PF01865 Protein of unknown function DUF47 M001_RS02635 PF01384 Phosphate transporter family M001_RS02640 PF03447 Homoserine dehydrogenase, NAD binding domain M001_RS02640 PF00742 Homoserine dehydrogenase M001_RS02640 PF00696 Amino acid kinase family M001_RS02645 PF01053 Cys/Met metabolism PLP-dependent enzyme M001_RS02650 PF01340 Met Apo-repressor, MetJ M001_RS02655 PF02311 AraC-like ligand binding domain M001_RS02655 PF12833 Helix-turn-helix domain M001_RS02660 PF01588 Putative tRNA binding domain M001_RS02665 PF03222 Tryptophan/tyrosine permease family M001_RS02670 PF00459 Inositol monophosphatase family M001_RS02675 PF00293 NUDIX domain M001_RS02680 PF13419 Haloacid dehalogenase-like hydrolase M001_RS02695 PF14602 Hexapeptide repeat of succinyl-transferase M001_RS02695 PF12464 Maltose acetyltransferase M001_RS02700 PF13194 Domain of unknown function (DUF4010) M001_RS02705 PF18416 N-acetylglucosamine binding protein domain 2 M001_RS02705 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading M001_RS02710 PF00672 HAMP domain M001_RS02710 PF12729 Four helix bundle sensory module for signal transduction M001_RS02710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS02720 PF02350 UDP-N-acetylglucosamine 2-epimerase M001_RS02725 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M001_RS02725 PF13632 Glycosyl transferase family group 2 M001_RS02730 PF13283 Bacteriophage N adsorption protein A C-term M001_RS02735 PF14488 Domain of unknown function (DUF4434) M001_RS02745 PF14883 Hypothetical glycosyl hydrolase family 13 M001_RS02745 PF01522 Polysaccharide deacetylase M001_RS02750 PF00535 Glycosyl transferase family 2 M001_RS02785 PF11230 Protein of unknown function (DUF3029) M001_RS02790 PF04055 Radical SAM superfamily M001_RS02800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS02800 PF03466 LysR substrate binding domain M001_RS02805 PF00155 Aminotransferase class I and II M001_RS02810 PF02583 Metal-sensitive transcriptional repressor M001_RS02825 PF17967 Pullulanase N2 domain M001_RS02825 PF18494 Pullulanase Ins domain M001_RS02825 PF03714 Bacterial pullanase-associated domain M001_RS02825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M001_RS02825 PF11852 Domain of unknown function (DUF3372) M001_RS02830 PF00403 Heavy-metal-associated domain M001_RS02835 PF08534 Redoxin M001_RS02845 PF00271 Helicase conserved C-terminal domain M001_RS02845 PF00270 DEAD/DEAH box helicase M001_RS02855 PF03372 Endonuclease/Exonuclease/phosphatase family M001_RS02875 PF06062 Uncharacterised protein family (UPF0231) M001_RS02880 PF05651 Putative sugar diacid recognition M001_RS02880 PF13556 PucR C-terminal helix-turn-helix domain M001_RS02880 PF17853 GGDEF-like domain M001_RS02885 PF02447 GntP family permease M001_RS02890 PF02595 Glycerate kinase family M001_RS02900 PF00255 Glutathione peroxidase M001_RS02905 PF03466 LysR substrate binding domain M001_RS02905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS02910 PF07670 Nucleoside recognition M001_RS02910 PF07662 Na+ dependent nucleoside transporter C-terminus M001_RS02910 PF01773 Na+ dependent nucleoside transporter N-terminus M001_RS02920 PF02594 Uncharacterised ACR, YggU family COG1872 M001_RS02925 PF02325 YGGT family M001_RS02930 PF03807 NADP oxidoreductase coenzyme F420-dependent M001_RS02930 PF14748 Pyrroline-5-carboxylate reductase dimerisation M001_RS02935 PF01168 Alanine racemase, N-terminal domain M001_RS02940 PF00437 Type II/IV secretion system protein M001_RS02945 PF00437 Type II/IV secretion system protein M001_RS02950 PF03883 Peroxide stress protein YaaA M001_RS02960 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M001_RS02960 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M001_RS02965 PF00472 RF-1 domain M001_RS02970 PF00543 Nitrogen regulatory protein P-II M001_RS02975 PF13416 Bacterial extracellular solute-binding protein M001_RS02985 PF00005 ABC transporter M001_RS02985 PF08402 TOBE domain M001_RS02990 PF04261 Dyp-type peroxidase family M001_RS02995 PF02863 Arginine repressor, C-terminal domain M001_RS02995 PF01316 Arginine repressor, DNA binding domain M001_RS03000 PF00005 ABC transporter M001_RS03005 PF00497 Bacterial extracellular solute-binding proteins, family 3 M001_RS03010 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS03015 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS03020 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M001_RS03020 PF00056 lactate/malate dehydrogenase, NAD binding domain M001_RS03025 PF08238 Sel1 repeat M001_RS03030 PF00970 Oxidoreductase FAD-binding domain M001_RS03030 PF00042 Globin M001_RS03030 PF00175 Oxidoreductase NAD-binding domain M001_RS03035 PF02082 Transcriptional regulator M001_RS03040 PF03471 Transporter associated domain M001_RS03040 PF01595 Cyclin M transmembrane N-terminal domain M001_RS03040 PF00571 CBS domain M001_RS03045 PF01578 Cytochrome C assembly protein M001_RS03050 PF00448 SRP54-type protein, GTPase domain M001_RS03050 PF02881 SRP54-type protein, helical bundle domain M001_RS03050 PF02978 Signal peptide binding domain M001_RS03055 PF00886 Ribosomal protein S16 M001_RS03060 PF05239 PRC-barrel domain M001_RS03060 PF01782 RimM N-terminal domain M001_RS03065 PF01746 tRNA (Guanine-1)-methyltransferase M001_RS03070 PF01245 Ribosomal protein L19 M001_RS03080 PF02976 DNA mismatch repair enzyme MutH M001_RS03085 PF00293 NUDIX domain M001_RS03090 PF00391 PEP-utilising enzyme, mobile domain M001_RS03090 PF05524 PEP-utilising enzyme, N-terminal M001_RS03090 PF02896 PEP-utilising enzyme, TIM barrel domain M001_RS03090 PF01590 GAF domain M001_RS03095 PF01790 Prolipoprotein diacylglyceryl transferase M001_RS03100 PF00303 Thymidylate synthase M001_RS03105 PF06965 Na+/H+ antiporter 1 M001_RS03115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS03115 PF03466 LysR substrate binding domain M001_RS03120 PF01022 Bacterial regulatory protein, arsR family M001_RS03125 PF01649 Ribosomal protein S20 M001_RS03130 PF03023 Lipid II flippase MurJ M001_RS03135 PF01687 Riboflavin kinase M001_RS03135 PF06574 FAD synthetase M001_RS03140 PF08264 Anticodon-binding domain of tRNA M001_RS03140 PF00133 tRNA synthetases class I (I, L, M and V) M001_RS03140 PF06827 Zinc finger found in FPG and IleRS M001_RS03145 PF01252 Signal peptidase (SPase) II M001_RS03150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M001_RS03155 PF02401 LytB protein M001_RS03160 PF00114 Pilin (bacterial filament) M001_RS03160 PF07963 Prokaryotic N-terminal methylation motif M001_RS03180 PF05567 Neisseria PilC beta-propeller domain M001_RS03195 PF02540 NAD synthase M001_RS03195 PF00795 Carbon-nitrogen hydrolase M001_RS03200 PF00543 Nitrogen regulatory protein P-II M001_RS03210 PF02664 S-Ribosylhomocysteinase (LuxS) M001_RS03220 PF00114 Pilin (bacterial filament) M001_RS03220 PF07963 Prokaryotic N-terminal methylation motif M001_RS03225 PF01026 TatD related DNase M001_RS03230 PF07670 Nucleoside recognition M001_RS03230 PF01773 Na+ dependent nucleoside transporter N-terminus M001_RS03230 PF07662 Na+ dependent nucleoside transporter C-terminus M001_RS03240 PF01791 DeoC/LacD family aldolase M001_RS03245 PF00591 Glycosyl transferase family, a/b domain M001_RS03245 PF02885 Glycosyl transferase family, helical bundle domain M001_RS03245 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M001_RS03250 PF01676 Metalloenzyme superfamily M001_RS03255 PF01048 Phosphorylase superfamily M001_RS03265 PF18429 Domain of unknown function (DUF5609) M001_RS03275 PF13006 Insertion element 4 transposase N-terminal M001_RS03275 PF01609 Transposase DDE domain M001_RS03285 PF18073 Rubredoxin metal binding domain M001_RS03290 PF07238 PilZ domain M001_RS03295 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ M001_RS03300 PF00216 Bacterial DNA-binding protein M001_RS03310 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M001_RS03310 PF01411 tRNA synthetases class II (A) M001_RS03310 PF02272 DHHA1 domain M001_RS03315 PF01566 Natural resistance-associated macrophage protein M001_RS03320 PF01250 Ribosomal protein S6 M001_RS03325 PF01084 Ribosomal protein S18 M001_RS03330 PF03948 Ribosomal protein L9, C-terminal domain M001_RS03330 PF01281 Ribosomal protein L9, N-terminal domain M001_RS03335 PF00175 Oxidoreductase NAD-binding domain M001_RS03335 PF00970 Oxidoreductase FAD-binding domain M001_RS03360 PF08659 KR domain M001_RS03360 PF14765 Polyketide synthase dehydratase M001_RS03360 PF00550 Phosphopantetheine attachment site M001_RS03360 PF08240 Alcohol dehydrogenase GroES-like domain M001_RS03360 PF00698 Acyl transferase domain M001_RS03365 PF09335 SNARE associated Golgi protein M001_RS03370 PF05193 Peptidase M16 inactive domain M001_RS03370 PF00675 Insulinase (Peptidase family M16) M001_RS03375 PF04262 Glutamate-cysteine ligase M001_RS03380 PF00501 AMP-binding enzyme M001_RS03390 PF13673 Acetyltransferase (GNAT) domain M001_RS03390 PF00583 Acetyltransferase (GNAT) family M001_RS03400 PF07728 AAA domain (dynein-related subfamily) M001_RS03400 PF17868 AAA lid domain M001_RS03400 PF12592 Protein of unknown function (DUF3763) M001_RS03405 PF05762 VWA domain containing CoxE-like protein M001_RS03410 PF00072 Response regulator receiver domain M001_RS03410 PF00990 Diguanylate cyclase, GGDEF domain M001_RS03420 PF03144 Elongation factor Tu domain 2 M001_RS03420 PF00009 Elongation factor Tu GTP binding domain M001_RS03420 PF16658 Class II release factor RF3, C-terminal domain M001_RS03425 PF00583 Acetyltransferase (GNAT) family M001_RS03430 PF00583 Acetyltransferase (GNAT) family M001_RS03435 PF07690 Major Facilitator Superfamily M001_RS03440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS03440 PF03466 LysR substrate binding domain M001_RS03445 PF01447 Thermolysin metallopeptidase, catalytic domain M001_RS03445 PF03413 Peptidase propeptide and YPEB domain M001_RS03445 PF02868 Thermolysin metallopeptidase, alpha-helical domain M001_RS03445 PF04151 Bacterial pre-peptidase C-terminal domain M001_RS03445 PF07504 Fungalysin/Thermolysin Propeptide Motif M001_RS03450 PF13302 Acetyltransferase (GNAT) domain M001_RS03455 PF13302 Acetyltransferase (GNAT) domain M001_RS03465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M001_RS03465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M001_RS03470 PF07690 Major Facilitator Superfamily M001_RS03475 PF01725 Ham1 family M001_RS03480 PF06969 HemN C-terminal domain M001_RS03480 PF04055 Radical SAM superfamily M001_RS03485 PF03889 Alternative ribosome-rescue factor A M001_RS03490 PF13411 MerR HTH family regulatory protein M001_RS03495 PF02142 MGS-like domain M001_RS03495 PF01808 AICARFT/IMPCHase bienzyme M001_RS03500 PF02843 Phosphoribosylglycinamide synthetase, C domain M001_RS03500 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M001_RS03500 PF02844 Phosphoribosylglycinamide synthetase, N domain M001_RS03520 PF04539 Sigma-70 region 3 M001_RS03520 PF04545 Sigma-70, region 4 M001_RS03520 PF00140 Sigma-70 factor, region 1.2 M001_RS03520 PF03979 Sigma-70 factor, region 1.1 M001_RS03520 PF04542 Sigma-70 region 2 M001_RS03520 PF04546 Sigma-70, non-essential region M001_RS03525 PF01807 CHC2 zinc finger M001_RS03525 PF08278 DNA primase DnaG DnaB-binding M001_RS03525 PF10410 DnaB-helicase binding domain of primase M001_RS03525 PF08275 DNA primase catalytic core, N-terminal domain M001_RS03530 PF09424 Yqey-like protein M001_RS03535 PF01165 Ribosomal protein S21 M001_RS03540 PF00814 Glycoprotease family M001_RS03545 PF03605 Anaerobic c4-dicarboxylate membrane transporter M001_RS03550 PF00206 Lyase M001_RS03550 PF10415 Fumarase C C-terminus M001_RS03555 PF04186 FxsA cytoplasmic membrane protein M001_RS03560 PF01554 MatE M001_RS03565 PF00166 Chaperonin 10 Kd subunit M001_RS03570 PF00118 TCP-1/cpn60 chaperonin family M001_RS03580 PF00563 EAL domain M001_RS03580 PF00990 Diguanylate cyclase, GGDEF domain M001_RS03580 PF03707 Bacterial signalling protein N terminal repeat M001_RS03610 PF00317 Ribonucleotide reductase, all-alpha domain M001_RS03610 PF08343 Ribonucleotide reductase N-terminal M001_RS03610 PF02867 Ribonucleotide reductase, barrel domain M001_RS03620 PF02562 PhoH-like protein M001_RS03620 PF13638 PIN domain M001_RS03625 PF00005 ABC transporter M001_RS03630 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS03650 PF00694 Aconitase C-terminal domain M001_RS03655 PF00330 Aconitase family (aconitate hydratase) M001_RS03660 PF00180 Isocitrate/isopropylmalate dehydrogenase M001_RS03665 PF08502 LeuA allosteric (dimerisation) domain M001_RS03665 PF00682 HMGL-like M001_RS03675 PF01569 PAP2 superfamily M001_RS03690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M001_RS03690 PF00205 Thiamine pyrophosphate enzyme, central domain M001_RS03690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M001_RS03695 PF10369 Small subunit of acetolactate synthase M001_RS03720 PF02954 Bacterial regulatory protein, Fis family M001_RS03725 PF01207 Dihydrouridine synthase (Dus) M001_RS03730 PF02321 Outer membrane efflux protein M001_RS03735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M001_RS03765 PF00072 Response regulator receiver domain M001_RS03770 PF00854 POT family M001_RS03775 PF00483 Nucleotidyl transferase M001_RS03785 PF07085 DRTGG domain M001_RS03785 PF01515 Phosphate acetyl/butaryl transferase M001_RS03790 PF00871 Acetokinase family M001_RS03795 PF04217 Protein of unknown function, DUF412 M001_RS03800 PF03887 YfbU domain M001_RS03805 PF00578 AhpC/TSA family M001_RS03810 PF01842 ACT domain M001_RS03815 PF00701 Dihydrodipicolinate synthetase family M001_RS03820 PF06804 NlpB/DapX lipoprotein M001_RS03825 PF01259 SAICAR synthetase M001_RS03835 PF03466 LysR substrate binding domain M001_RS03835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS03840 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M001_RS03860 PF00512 His Kinase A (phospho-acceptor) domain M001_RS03860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS03860 PF00072 Response regulator receiver domain M001_RS03860 PF01627 Hpt domain M001_RS03860 PF00989 PAS fold M001_RS03860 PF18415 Histidine kinase receptor ArcB trans-membrane domain M001_RS03865 PF01966 HD domain M001_RS03865 PF13286 Phosphohydrolase-associated domain M001_RS03875 PF00672 HAMP domain M001_RS03875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS03880 PF02357 Transcription termination factor nusG M001_RS03885 PF03180 NLPA lipoprotein M001_RS03890 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS03895 PF09383 NIL domain M001_RS03895 PF00005 ABC transporter M001_RS03905 PF00480 ROK family M001_RS03910 PF08331 Domain of unknown function (DUF1730) M001_RS03915 PF01256 Carbohydrate kinase M001_RS03915 PF03853 YjeF-related protein N-terminus M001_RS03920 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M001_RS03925 PF01520 N-acetylmuramoyl-L-alanine amidase M001_RS03930 PF01119 DNA mismatch repair protein, C-terminal domain M001_RS03930 PF08676 MutL C terminal dimerisation domain M001_RS03935 PF01119 DNA mismatch repair protein, C-terminal domain M001_RS03935 PF08676 MutL C terminal dimerisation domain M001_RS03945 PF17209 Hfq protein M001_RS03950 PF16360 GTP-binding GTPase Middle Region M001_RS03950 PF01926 50S ribosome-binding GTPase M001_RS03950 PF13167 GTP-binding GTPase N-terminal M001_RS03955 PF01145 SPFH domain / Band 7 family M001_RS03955 PF12221 Bacterial membrane protein N terminal M001_RS03960 PF01145 SPFH domain / Band 7 family M001_RS03965 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) M001_RS03970 PF00348 Polyprenyl synthetase M001_RS03975 PF00829 Ribosomal prokaryotic L21 protein M001_RS03980 PF01016 Ribosomal L27 protein M001_RS03985 PF01926 50S ribosome-binding GTPase M001_RS03985 PF01018 GTP1/OBG M001_RS04000 PF00296 Luciferase-like monooxygenase M001_RS04015 PF00149 Calcineurin-like phosphoesterase M001_RS04020 PF04379 ApaG domain M001_RS04025 PF00398 Ribosomal RNA adenine dimethylase M001_RS04030 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M001_RS04035 PF00639 PPIC-type PPIASE domain M001_RS04035 PF09312 SurA N-terminal domain M001_RS04040 PF04453 LPS transport system D M001_RS04040 PF03968 OstA-like protein M001_RS04045 PF01636 Phosphotransferase enzyme family M001_RS04050 PF00483 Nucleotidyl transferase M001_RS04055 PF05099 Tellurite resistance protein TerB M001_RS04055 PF00226 DnaJ domain M001_RS04060 PF01546 Peptidase family M20/M25/M40 M001_RS04060 PF07687 Peptidase dimerisation domain M001_RS04065 PF00156 Phosphoribosyl transferase domain M001_RS04075 PF07417 Sigma factor-binding transcriptional regulator Crl M001_RS04080 PF00696 Amino acid kinase family M001_RS04080 PF01472 PUA domain M001_RS04085 PF00171 Aldehyde dehydrogenase family M001_RS04100 PF09905 DNA-binding protein VF530 M001_RS04105 PF02666 Phosphatidylserine decarboxylase M001_RS04110 PF03193 RsgA GTPase M001_RS04115 PF00929 Exonuclease M001_RS04155 PF00313 'Cold-shock' DNA-binding domain M001_RS04165 PF00672 HAMP domain M001_RS04165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS04170 PF00749 tRNA synthetases class I (E and Q), catalytic domain M001_RS04175 PF00860 Permease family M001_RS04185 PF00005 ABC transporter M001_RS04185 PF12848 ABC transporter M001_RS04200 PF01464 Transglycosylase SLT domain M001_RS04210 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) M001_RS04215 PF01370 NAD dependent epimerase/dehydratase family M001_RS04220 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M001_RS04220 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M001_RS04220 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M001_RS04230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M001_RS04230 PF00005 ABC transporter M001_RS04235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M001_RS04235 PF00005 ABC transporter M001_RS04245 PF12911 N-terminal TM domain of oligopeptide transport permease C M001_RS04245 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS04250 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS04255 PF00593 TonB dependent receptor M001_RS04255 PF07715 TonB-dependent Receptor Plug Domain M001_RS04265 PF01618 MotA/TolQ/ExbB proton channel family M001_RS04270 PF01618 MotA/TolQ/ExbB proton channel family M001_RS04275 PF02472 Biopolymer transport protein ExbD/TolR M001_RS04290 PF17969 L,D-transpeptidase C-terminal domain M001_RS04290 PF03734 L,D-transpeptidase catalytic domain M001_RS04295 PF01343 Peptidase family S49 M001_RS04300 PF07992 Pyridine nucleotide-disulphide oxidoreductase M001_RS04300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M001_RS04305 PF00881 Nitroreductase family M001_RS04310 PF14602 Hexapeptide repeat of succinyl-transferase M001_RS04310 PF12464 Maltose acetyltransferase M001_RS04325 PF00107 Zinc-binding dehydrogenase M001_RS04325 PF08240 Alcohol dehydrogenase GroES-like domain M001_RS04330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS04330 PF03466 LysR substrate binding domain M001_RS04335 PF02378 Phosphotransferase system, EIIC M001_RS04335 PF00367 phosphotransferase system, EIIB M001_RS04335 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M001_RS04340 PF00474 Sodium:solute symporter family M001_RS04350 PF00289 Biotin carboxylase, N-terminal domain M001_RS04350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M001_RS04350 PF02785 Biotin carboxylase C-terminal domain M001_RS04355 PF00364 Biotin-requiring enzyme M001_RS04360 PF01220 Dehydroquinase class II M001_RS04365 PF13193 AMP-binding enzyme C-terminal domain M001_RS04365 PF16177 Acetyl-coenzyme A synthetase N-terminus M001_RS04365 PF00501 AMP-binding enzyme M001_RS04375 PF00563 EAL domain M001_RS04375 PF03707 Bacterial signalling protein N terminal repeat M001_RS04375 PF00990 Diguanylate cyclase, GGDEF domain M001_RS04385 PF02613 Nitrate reductase delta subunit M001_RS04390 PF18364 Molybdopterin oxidoreductase N-terminal domain M001_RS04390 PF00384 Molybdopterin oxidoreductase M001_RS04390 PF01568 Molydopterin dinucleotide binding domain M001_RS04395 PF03264 NapC/NirT cytochrome c family, N-terminal region M001_RS04400 PF00486 Transcriptional regulatory protein, C terminal M001_RS04400 PF00072 Response regulator receiver domain M001_RS04410 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M001_RS04415 PF00672 HAMP domain M001_RS04415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS04415 PF00512 His Kinase A (phospho-acceptor) domain M001_RS04415 PF01627 Hpt domain M001_RS04415 PF00072 Response regulator receiver domain M001_RS04425 PF00464 Serine hydroxymethyltransferase M001_RS04430 PF03477 ATP cone domain M001_RS04435 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M001_RS04435 PF01872 RibD C-terminal domain M001_RS04440 PF00677 Lumazine binding domain M001_RS04445 PF00925 GTP cyclohydrolase II M001_RS04445 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M001_RS04455 PF00885 6,7-dimethyl-8-ribityllumazine synthase M001_RS04460 PF01029 NusB family M001_RS04465 PF02769 AIR synthase related protein, C-terminal domain M001_RS04465 PF00586 AIR synthase related protein, N-terminal domain M001_RS04470 PF04608 Phosphatidylglycerophosphatase A M001_RS04475 PF00005 ABC transporter M001_RS04475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M001_RS04480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M001_RS04490 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS04490 PF12911 N-terminal TM domain of oligopeptide transport permease C M001_RS04495 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M001_RS04495 PF02779 Transketolase, pyrimidine binding domain M001_RS04495 PF02780 Transketolase, C-terminal domain M001_RS04500 PF00348 Polyprenyl synthetase M001_RS04505 PF02609 Exonuclease VII small subunit M001_RS04510 PF01618 MotA/TolQ/ExbB proton channel family M001_RS04515 PF00691 OmpA family M001_RS04515 PF13677 Membrane MotB of proton-channel complex MotA/MotB M001_RS04520 PF01272 Transcription elongation factor, GreA/GreB, C-term M001_RS04520 PF03449 Transcription elongation factor, N-terminal M001_RS04530 PF01985 CRS1 / YhbY (CRM) domain M001_RS04535 PF01728 FtsJ-like methyltransferase M001_RS04540 PF00004 ATPase family associated with various cellular activities (AAA) M001_RS04540 PF17862 AAA+ lid domain M001_RS04540 PF01434 Peptidase family M41 M001_RS04540 PF06480 FtsH Extracellular M001_RS04545 PF00809 Pterin binding enzyme M001_RS04550 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M001_RS04550 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M001_RS04550 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M001_RS04550 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M001_RS04555 PF00121 Triosephosphate isomerase M001_RS04560 PF03840 Preprotein translocase SecG subunit M001_RS04575 PF02576 RimP N-terminal domain M001_RS04575 PF17384 RimP C-terminal SH3 domain M001_RS04580 PF08529 NusA N-terminal domain M001_RS04580 PF00575 S1 RNA binding domain M001_RS04580 PF13184 NusA-like KH domain M001_RS04585 PF11987 Translation-initiation factor 2 M001_RS04585 PF00009 Elongation factor Tu GTP binding domain M001_RS04585 PF04760 Translation initiation factor IF-2, N-terminal region M001_RS04585 PF08364 Bacterial translation initiation factor IF-2 associated region M001_RS04590 PF02033 Ribosome-binding factor A M001_RS04595 PF01509 TruB family pseudouridylate synthase (N terminal domain) M001_RS04595 PF09157 Pseudouridine synthase II TruB, C-terminal M001_RS04595 PF16198 tRNA pseudouridylate synthase B C-terminal domain M001_RS04600 PF00312 Ribosomal protein S15 M001_RS04605 PF01138 3' exoribonuclease family, domain 1 M001_RS04605 PF03725 3' exoribonuclease family, domain 2 M001_RS04605 PF00575 S1 RNA binding domain M001_RS04605 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M001_RS04605 PF00013 KH domain M001_RS04610 PF00072 Response regulator receiver domain M001_RS04610 PF01339 CheB methylesterase M001_RS04615 PF03975 CheD chemotactic sensory transduction M001_RS04620 PF01739 CheR methyltransferase, SAM binding domain M001_RS04620 PF03705 CheR methyltransferase, all-alpha domain M001_RS04625 PF00672 HAMP domain M001_RS04625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS04630 PF01584 CheW-like domain M001_RS04635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS04635 PF00672 HAMP domain M001_RS04635 PF12729 Four helix bundle sensory module for signal transduction M001_RS04640 PF01627 Hpt domain M001_RS04640 PF07194 P2 response regulator binding domain M001_RS04640 PF02895 Signal transducing histidine kinase, homodimeric domain M001_RS04640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS04640 PF01584 CheW-like domain M001_RS04650 PF00072 Response regulator receiver domain M001_RS04655 PF02743 Cache domain M001_RS04655 PF00672 HAMP domain M001_RS04655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS04665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS04665 PF03466 LysR substrate binding domain M001_RS04670 PF01810 LysE type translocator M001_RS04675 PF01136 Peptidase family U32 M001_RS04675 PF12392 Collagenase M001_RS04680 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M001_RS04680 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M001_RS04685 PF02805 Metal binding domain of Ada M001_RS04685 PF12833 Helix-turn-helix domain M001_RS04685 PF00730 HhH-GPD superfamily base excision DNA repair protein M001_RS04685 PF06029 AlkA N-terminal domain M001_RS04690 PF00114 Pilin (bacterial filament) M001_RS04690 PF07963 Prokaryotic N-terminal methylation motif M001_RS04720 PF02074 Carboxypeptidase Taq (M32) metallopeptidase M001_RS04745 PF00106 short chain dehydrogenase M001_RS04750 PF03573 outer membrane porin, OprD family M001_RS04755 PF16591 Helical bimodular sensor domain M001_RS04755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS04755 PF00672 HAMP domain M001_RS04765 PF05638 Type VI secretion system effector, Hcp M001_RS04770 PF04717 Type VI secretion system, phage-baseplate injector M001_RS04815 PF00800 Prephenate dehydratase M001_RS04815 PF01817 Chorismate mutase type II M001_RS04830 PF06508 Queuosine biosynthesis protein QueC M001_RS04845 PF08349 Protein of unknown function (DUF1722) M001_RS04850 PF13411 MerR HTH family regulatory protein M001_RS04855 PF00875 DNA photolyase M001_RS04855 PF03441 FAD binding domain of DNA photolyase M001_RS04865 PF00106 short chain dehydrogenase M001_RS04910 PF02424 ApbE family M001_RS04915 PF00111 2Fe-2S iron-sulfur cluster binding domain M001_RS04915 PF00970 Oxidoreductase FAD-binding domain M001_RS04915 PF00175 Oxidoreductase NAD-binding domain M001_RS04920 PF02508 Rnf-Nqr subunit, membrane protein M001_RS04925 PF02508 Rnf-Nqr subunit, membrane protein M001_RS04930 PF04205 FMN-binding domain M001_RS04935 PF03116 NQR2, RnfD, RnfE family M001_RS04940 PF11973 NQRA C-terminal domain M001_RS04940 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) M001_RS04945 PF01722 BolA-like protein M001_RS04950 PF05175 Methyltransferase small domain M001_RS04960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M001_RS04965 PF07690 Major Facilitator Superfamily M001_RS04970 PF03502 Nucleoside-specific channel-forming protein, Tsx M001_RS04975 PF04461 Protein of unknown function (DUF520) M001_RS04980 PF02558 Ketopantoate reductase PanE/ApbA M001_RS04980 PF08546 Ketopantoate reductase PanE/ApbA C terminal M001_RS04985 PF01965 DJ-1/PfpI family M001_RS04995 PF11799 impB/mucB/samB family C-terminal domain M001_RS04995 PF11798 IMS family HHH motif M001_RS04995 PF00817 impB/mucB/samB family M001_RS05000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS05000 PF00672 HAMP domain M001_RS05005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS05005 PF03466 LysR substrate binding domain M001_RS05015 PF04241 Protein of unknown function (DUF423) M001_RS05020 PF18125 RlmM ferredoxin-like domain M001_RS05020 PF01728 FtsJ-like methyltransferase M001_RS05030 PF01609 Transposase DDE domain M001_RS05030 PF13006 Insertion element 4 transposase N-terminal M001_RS05035 PF00180 Isocitrate/isopropylmalate dehydrogenase M001_RS05035 PF18324 Hypothetical protein TT1725 M001_RS05040 PF01367 5'-3' exonuclease, C-terminal SAM fold M001_RS05040 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M001_RS05045 PF11892 Domain of unknown function (DUF3412) M001_RS05045 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases M001_RS05045 PF03641 Possible lysine decarboxylase M001_RS05050 PF00990 Diguanylate cyclase, GGDEF domain M001_RS05050 PF17158 Membrane-associated sensor, integral membrane domain M001_RS05060 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M001_RS05060 PF14489 QueF-like protein M001_RS05065 PF07348 Syd protein (SUKH-2) M001_RS05070 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) M001_RS05095 PF04287 tRNA pseudouridine synthase C M001_RS05100 PF00849 RNA pseudouridylate synthase M001_RS05105 PF00258 Flavodoxin M001_RS05110 PF02264 LamB porin M001_RS05115 PF07148 Maltose operon periplasmic protein precursor (MalM) M001_RS05120 PF00367 phosphotransferase system, EIIB M001_RS05120 PF02378 Phosphotransferase system, EIIC M001_RS05125 PF11944 Protein of unknown function (DUF3461) M001_RS05130 PF14602 Hexapeptide repeat of succinyl-transferase M001_RS05130 PF00132 Bacterial transferase hexapeptide (six repeats) M001_RS05130 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M001_RS05135 PF01842 ACT domain M001_RS05135 PF01909 Nucleotidyltransferase domain M001_RS05135 PF08335 GlnD PII-uridylyltransferase M001_RS05135 PF01966 HD domain M001_RS05140 PF00557 Metallopeptidase family M24 M001_RS05145 PF00318 Ribosomal protein S2 M001_RS05150 PF00889 Elongation factor TS M001_RS05155 PF00696 Amino acid kinase family M001_RS05160 PF01765 Ribosome recycling factor M001_RS05165 PF01255 Putative undecaprenyl diphosphate synthase M001_RS05175 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M001_RS05175 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M001_RS05175 PF13288 DXP reductoisomerase C-terminal domain M001_RS05180 PF02163 Peptidase family M50 M001_RS05180 PF17820 PDZ domain M001_RS05185 PF01103 Surface antigen M001_RS05185 PF07244 Surface antigen variable number repeat M001_RS05190 PF03938 Outer membrane protein (OmpH-like) M001_RS05195 PF00132 Bacterial transferase hexapeptide (six repeats) M001_RS05195 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M001_RS05200 PF07977 FabA-like domain M001_RS05205 PF00132 Bacterial transferase hexapeptide (six repeats) M001_RS05205 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M001_RS05210 PF02684 Lipid-A-disaccharide synthetase M001_RS05215 PF01351 Ribonuclease HII M001_RS05220 PF02811 PHP domain M001_RS05220 PF14579 Helix-hairpin-helix motif M001_RS05220 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M001_RS05220 PF07733 Bacterial DNA polymerase III alpha NTPase domain M001_RS05220 PF01336 OB-fold nucleic acid binding domain M001_RS05225 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M001_RS05235 PF00923 Transaldolase/Fructose-6-phosphate aldolase M001_RS05240 PF01235 Sodium:alanine symporter family M001_RS05245 PF01841 Transglutaminase-like superfamily M001_RS05245 PF13559 Domain of unknown function (DUF4129) M001_RS05245 PF11992 Domain of unknown function (DUF3488) M001_RS05255 PF07726 ATPase family associated with various cellular activities (AAA) M001_RS05255 PF17863 AAA lid domain M001_RS05260 PF07690 Major Facilitator Superfamily M001_RS05265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS05265 PF03466 LysR substrate binding domain M001_RS05270 PF00854 POT family M001_RS05275 PF03652 Holliday junction resolvase M001_RS05280 PF02622 Uncharacterized ACR, COG1678 M001_RS05285 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M001_RS05285 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M001_RS05290 PF04452 RNA methyltransferase M001_RS05295 PF04231 Endonuclease I M001_RS05300 PF17283 SprT-like zinc ribbon domain M001_RS05300 PF10263 SprT-like family M001_RS05305 PF00438 S-adenosylmethionine synthetase, N-terminal domain M001_RS05305 PF02772 S-adenosylmethionine synthetase, central domain M001_RS05305 PF02773 S-adenosylmethionine synthetase, C-terminal domain M001_RS05310 PF00456 Transketolase, thiamine diphosphate binding domain M001_RS05310 PF02780 Transketolase, C-terminal domain M001_RS05310 PF02779 Transketolase, pyrimidine binding domain M001_RS05320 PF01042 Endoribonuclease L-PSP M001_RS05330 PF03702 Anhydro-N-acetylmuramic acid kinase M001_RS05335 PF01551 Peptidase family M23 M001_RS05335 PF08525 Opacity-associated protein A N-terminal motif M001_RS05335 PF01476 LysM domain M001_RS05340 PF00579 tRNA synthetases class I (W and Y) M001_RS05345 PF03466 LysR substrate binding domain M001_RS05345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS05350 PF03306 Alpha-acetolactate decarboxylase M001_RS05355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M001_RS05355 PF00205 Thiamine pyrophosphate enzyme, central domain M001_RS05355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M001_RS05365 PF03466 LysR substrate binding domain M001_RS05365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS05380 PF12706 Beta-lactamase superfamily domain M001_RS05385 PF03466 LysR substrate binding domain M001_RS05385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS05390 PF13520 Amino acid permease M001_RS05395 PF13302 Acetyltransferase (GNAT) domain M001_RS05400 PF16326 ABC transporter C-terminal domain M001_RS05400 PF12848 ABC transporter M001_RS05400 PF00005 ABC transporter M001_RS05405 PF18500 CadC C-terminal domain 1 M001_RS05405 PF00486 Transcriptional regulatory protein, C terminal M001_RS05410 PF13520 Amino acid permease M001_RS05415 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M001_RS05415 PF01276 Orn/Lys/Arg decarboxylase, major domain M001_RS05415 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M001_RS05420 PF08543 Phosphomethylpyrimidine kinase M001_RS05430 PF01431 Peptidase family M13 M001_RS05430 PF05649 Peptidase family M13 M001_RS05435 PF11734 TilS substrate C-terminal domain M001_RS05435 PF09179 TilS substrate binding domain M001_RS05435 PF01171 PP-loop family M001_RS05440 PF00990 Diguanylate cyclase, GGDEF domain M001_RS05445 PF02254 TrkA-N domain M001_RS05445 PF02080 TrkA-C domain M001_RS05445 PF00999 Sodium/hydrogen exchanger family M001_RS05465 PF00072 Response regulator receiver domain M001_RS05465 PF00196 Bacterial regulatory proteins, luxR family M001_RS05475 PF00128 Alpha amylase, catalytic domain M001_RS05490 PF00535 Glycosyl transferase family 2 M001_RS05505 PF03734 L,D-transpeptidase catalytic domain M001_RS05505 PF01471 Putative peptidoglycan binding domain M001_RS05510 PF05951 Bacterial protein of unknown function (DUF882) M001_RS05520 PF03458 UPF0126 domain M001_RS05530 PF06470 SMC proteins Flexible Hinge Domain M001_RS05530 PF02463 RecF/RecN/SMC N terminal domain M001_RS05535 PF04354 ZipA, C-terminal FtsZ-binding domain M001_RS05540 PF03120 NAD-dependent DNA ligase OB-fold domain M001_RS05540 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M001_RS05540 PF01653 NAD-dependent DNA ligase adenylation domain M001_RS05540 PF00533 BRCA1 C Terminus (BRCT) domain M001_RS05540 PF12826 Helix-hairpin-helix motif M001_RS05555 PF03477 ATP cone domain M001_RS05555 PF13597 Anaerobic ribonucleoside-triphosphate reductase M001_RS05565 PF01679 Proteolipid membrane potential modulator M001_RS05590 PF00529 HlyD membrane-fusion protein of T1SS M001_RS05590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M001_RS05595 PF01047 MarR family M001_RS05605 PF03390 2-hydroxycarboxylate transporter family M001_RS05610 PF03949 Malic enzyme, NAD binding domain M001_RS05610 PF00390 Malic enzyme, N-terminal domain M001_RS05615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS05615 PF17203 Single cache domain 3 M001_RS05615 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M001_RS05615 PF00989 PAS fold M001_RS05620 PF12431 Transcriptional regulator M001_RS05620 PF00072 Response regulator receiver domain M001_RS05625 PF00892 EamA-like transporter family M001_RS05635 PF00171 Aldehyde dehydrogenase family M001_RS05640 PF01590 GAF domain M001_RS05640 PF00158 Sigma-54 interaction domain M001_RS05640 PF02954 Bacterial regulatory protein, Fis family M001_RS05645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M001_RS05650 PF00486 Transcriptional regulatory protein, C terminal M001_RS05650 PF00072 Response regulator receiver domain M001_RS05655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS05655 PF11808 Phosphate regulon sensor protein PhoR M001_RS05655 PF00512 His Kinase A (phospho-acceptor) domain M001_RS05655 PF00989 PAS fold M001_RS05660 PF12849 PBP superfamily domain M001_RS05665 PF01435 Peptidase family M48 M001_RS05675 PF00480 ROK family M001_RS05680 PF03932 CutC family M001_RS05685 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M001_RS05685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M001_RS05700 PF00293 NUDIX domain M001_RS05710 PF08534 Redoxin M001_RS05715 PF01699 Sodium/calcium exchanger protein M001_RS05720 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M001_RS05720 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M001_RS05725 PF01235 Sodium:alanine symporter family M001_RS05730 PF13195 Protein of unknown function (DUF4011) M001_RS05730 PF13195 Protein of unknown function (DUF4011) M001_RS05730 PF13086 AAA domain M001_RS05730 PF13087 AAA domain M001_RS05730 PF13087 AAA domain M001_RS05730 PF13086 AAA domain M001_RS05740 PF00860 Permease family M001_RS05745 PF00990 Diguanylate cyclase, GGDEF domain M001_RS05750 PF10692 Protein of unknown function (DUF2498) M001_RS05755 PF01554 MatE M001_RS05760 PF12833 Helix-turn-helix domain M001_RS05765 PF00390 Malic enzyme, N-terminal domain M001_RS05765 PF03949 Malic enzyme, NAD binding domain M001_RS05770 PF00691 OmpA family M001_RS05770 PF01389 OmpA-like transmembrane domain M001_RS05775 PF01389 OmpA-like transmembrane domain M001_RS05775 PF00691 OmpA family M001_RS05790 PF13520 Amino acid permease M001_RS05795 PF01734 Patatin-like phospholipase M001_RS05800 PF17158 Membrane-associated sensor, integral membrane domain M001_RS05800 PF00990 Diguanylate cyclase, GGDEF domain M001_RS05805 PF00529 HlyD membrane-fusion protein of T1SS M001_RS05805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M001_RS05810 PF00873 AcrB/AcrD/AcrF family M001_RS05815 PF11842 Domain of unknown function (DUF3362) M001_RS05815 PF08497 Radical SAM N-terminal M001_RS05815 PF04055 Radical SAM superfamily M001_RS05845 PF04151 Bacterial pre-peptidase C-terminal domain M001_RS05845 PF04389 Peptidase family M28 M001_RS05860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS05860 PF03466 LysR substrate binding domain M001_RS05865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M001_RS05870 PF04358 DsrC like protein M001_RS05875 PF12805 FUSC-like inner membrane protein yccS M001_RS05880 PF01027 Inhibitor of apoptosis-promoting Bax1 M001_RS05890 PF00455 DeoR C terminal sensor domain M001_RS05890 PF08220 DeoR-like helix-turn-helix domain M001_RS05895 PF01261 Xylose isomerase-like TIM barrel M001_RS05910 PF03611 PTS system sugar-specific permease component M001_RS05915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M001_RS05920 PF00596 Class II Aldolase and Adducin N-terminal domain M001_RS05925 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M001_RS05930 PF01203 Type II secretion system (T2SS), protein N M001_RS05935 PF04612 Type II secretion system (T2SS), protein M M001_RS05940 PF05134 Type II secretion system (T2SS), protein L M001_RS05940 PF12693 GspL periplasmic domain M001_RS05945 PF03934 Type II secretion system (T2SS), protein K M001_RS05950 PF07963 Prokaryotic N-terminal methylation motif M001_RS05950 PF11612 Type II secretion system (T2SS), protein J M001_RS05955 PF07963 Prokaryotic N-terminal methylation motif M001_RS05955 PF02501 Type II secretion system (T2SS), protein I M001_RS05960 PF07963 Prokaryotic N-terminal methylation motif M001_RS05960 PF12019 Type II transport protein GspH M001_RS05965 PF07963 Prokaryotic N-terminal methylation motif M001_RS05965 PF08334 Type II secretion system (T2SS), protein G M001_RS05970 PF00482 Type II secretion system (T2SS), protein F M001_RS05975 PF00437 Type II/IV secretion system protein M001_RS05980 PF00263 Bacterial type II and III secretion system protein M001_RS05980 PF03958 Bacterial type II/III secretion system short domain M001_RS05985 PF11356 Type II secretion system protein C M001_RS05990 PF16537 Type II secretion system protein B M001_RS05995 PF01471 Putative peptidoglycan binding domain M001_RS05995 PF13401 AAA domain M001_RS06000 PF01966 HD domain M001_RS06000 PF00672 HAMP domain M001_RS06005 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M001_RS06005 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M001_RS06015 PF00004 ATPase family associated with various cellular activities (AAA) M001_RS06015 PF01434 Peptidase family M41 M001_RS06015 PF17862 AAA+ lid domain M001_RS06020 PF00291 Pyridoxal-phosphate dependent enzyme M001_RS06025 PF00381 PTS HPr component phosphorylation site M001_RS06030 PF05524 PEP-utilising enzyme, N-terminal M001_RS06030 PF00391 PEP-utilising enzyme, mobile domain M001_RS06030 PF02896 PEP-utilising enzyme, TIM barrel domain M001_RS06035 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M001_RS06040 PF13006 Insertion element 4 transposase N-terminal M001_RS06040 PF01609 Transposase DDE domain M001_RS06045 PF00990 Diguanylate cyclase, GGDEF domain M001_RS06045 PF08448 PAS fold M001_RS06050 PF05649 Peptidase family M13 M001_RS06050 PF01431 Peptidase family M13 M001_RS06060 PF12795 Mechanosensitive ion channel porin domain M001_RS06060 PF00924 Mechanosensitive ion channel M001_RS06060 PF12794 Mechanosensitive ion channel inner membrane domain 1 M001_RS06065 PF00224 Pyruvate kinase, barrel domain M001_RS06065 PF02887 Pyruvate kinase, alpha/beta domain M001_RS06075 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M001_RS06080 PF13476 AAA domain M001_RS06085 PF12320 Type 5 capsule protein repressor C-terminal domain M001_RS06085 PF00149 Calcineurin-like phosphoesterase M001_RS06095 PF04381 Putative exonuclease, RdgC M001_RS06105 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M001_RS06105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M001_RS06110 PF02690 Na+/Pi-cotransporter M001_RS06115 PF00324 Amino acid permease M001_RS06125 PF00324 Amino acid permease M001_RS06130 PF00202 Aminotransferase class-III M001_RS06135 PF00171 Aldehyde dehydrogenase family M001_RS06140 PF01381 Helix-turn-helix M001_RS06140 PF07883 Cupin domain M001_RS06145 PF01266 FAD dependent oxidoreductase M001_RS06160 PF03350 Uncharacterized protein family, UPF0114 M001_RS06165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS06165 PF08918 PhoQ Sensor M001_RS06170 PF00486 Transcriptional regulatory protein, C terminal M001_RS06170 PF00072 Response regulator receiver domain M001_RS06180 PF01292 Prokaryotic cytochrome b561 M001_RS06185 PF18389 TrmO C-terminal domain M001_RS06185 PF01980 tRNA-methyltransferase O M001_RS06205 PF00664 ABC transporter transmembrane region M001_RS06205 PF00005 ABC transporter M001_RS06210 PF00664 ABC transporter transmembrane region M001_RS06210 PF00005 ABC transporter M001_RS06225 PF00486 Transcriptional regulatory protein, C terminal M001_RS06225 PF00072 Response regulator receiver domain M001_RS06235 PF03737 Aldolase/RraA M001_RS06255 PF06953 Arsenical resistance operon trans-acting repressor ArsD M001_RS06260 PF02374 Anion-transporting ATPase M001_RS06265 PF01758 Sodium Bile acid symporter family M001_RS06270 PF03960 ArsC family M001_RS06275 PF01773 Na+ dependent nucleoside transporter N-terminus M001_RS06275 PF07670 Nucleoside recognition M001_RS06275 PF07662 Na+ dependent nucleoside transporter C-terminus M001_RS06295 PF04307 LexA-binding, inner membrane-associated putative hydrolase M001_RS06315 PF00290 Tryptophan synthase alpha chain M001_RS06320 PF00291 Pyridoxal-phosphate dependent enzyme M001_RS06325 PF00218 Indole-3-glycerol phosphate synthase M001_RS06325 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M001_RS06330 PF00591 Glycosyl transferase family, a/b domain M001_RS06330 PF02885 Glycosyl transferase family, helical bundle domain M001_RS06335 PF02885 Glycosyl transferase family, helical bundle domain M001_RS06335 PF00117 Glutamine amidotransferase class-I M001_RS06335 PF00591 Glycosyl transferase family, a/b domain M001_RS06340 PF04715 Anthranilate synthase component I, N terminal region M001_RS06340 PF00425 chorismate binding enzyme M001_RS06345 PF02811 PHP domain M001_RS06350 PF01300 Telomere recombination M001_RS06355 PF02616 Segregation and condensation protein ScpA M001_RS06360 PF04079 Segregation and condensation complex subunit ScpB M001_RS06365 PF01479 S4 domain M001_RS06365 PF00849 RNA pseudouridylate synthase M001_RS06375 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) M001_RS06380 PF00588 SpoU rRNA Methylase family M001_RS06385 PF00696 Amino acid kinase family M001_RS06385 PF01842 ACT domain M001_RS06385 PF13840 ACT domain M001_RS06385 PF00742 Homoserine dehydrogenase M001_RS06385 PF03447 Homoserine dehydrogenase, NAD binding domain M001_RS06390 PF00288 GHMP kinases N terminal domain M001_RS06390 PF08544 GHMP kinases C terminal M001_RS06395 PF14821 Threonine synthase N terminus M001_RS06395 PF00291 Pyridoxal-phosphate dependent enzyme M001_RS06420 PF18693 TRAM domain M001_RS06420 PF00919 Uncharacterized protein family UPF0004 M001_RS06420 PF04055 Radical SAM superfamily M001_RS06425 PF00072 Response regulator receiver domain M001_RS06440 PF02001 Protein of unknown function DUF134 M001_RS06455 PF00440 Bacterial regulatory proteins, tetR family M001_RS06455 PF08361 MAATS-type transcriptional repressor, C-terminal region M001_RS06460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M001_RS06460 PF00529 HlyD membrane-fusion protein of T1SS M001_RS06465 PF00873 AcrB/AcrD/AcrF family M001_RS06470 PF16363 GDP-mannose 4,6 dehydratase M001_RS06475 PF04321 RmlD substrate binding domain M001_RS06480 PF00483 Nucleotidyl transferase M001_RS06485 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase M001_RS06490 PF00437 Type II/IV secretion system protein M001_RS06495 PF00482 Type II secretion system (T2SS), protein F M001_RS06500 PF08334 Type II secretion system (T2SS), protein G M001_RS06500 PF07963 Prokaryotic N-terminal methylation motif M001_RS06505 PF08334 Type II secretion system (T2SS), protein G M001_RS06505 PF07963 Prokaryotic N-terminal methylation motif M001_RS06540 PF00263 Bacterial type II and III secretion system protein M001_RS06540 PF03958 Bacterial type II/III secretion system short domain M001_RS06560 PF00005 ABC transporter M001_RS06570 PF01757 Acyltransferase family M001_RS06580 PF01370 NAD dependent epimerase/dehydratase family M001_RS06585 PF00953 Glycosyl transferase family 4 M001_RS06590 PF02719 Polysaccharide biosynthesis protein M001_RS06600 PF00535 Glycosyl transferase family 2 M001_RS06605 PF13439 Glycosyltransferase Family 4 M001_RS06605 PF00534 Glycosyl transferases group 1 M001_RS06615 PF02397 Bacterial sugar transferase M001_RS06625 PF00816 H-NS histone family M001_RS06630 PF02321 Outer membrane efflux protein M001_RS06635 PF12704 MacB-like periplasmic core domain M001_RS06635 PF02687 FtsX-like permease family M001_RS06635 PF00005 ABC transporter M001_RS06640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M001_RS06645 PF01368 DHH family M001_RS06645 PF02833 DHHA2 domain M001_RS06650 PF02463 RecF/RecN/SMC N terminal domain M001_RS06655 PF01513 ATP-NAD kinase M001_RS06660 PF01025 GrpE M001_RS06665 PF00012 Hsp70 protein M001_RS06670 PF01556 DnaJ C terminal domain M001_RS06670 PF00684 DnaJ central domain M001_RS06670 PF00226 DnaJ domain M001_RS06675 PF11471 Maltoporin periplasmic N-terminal extension M001_RS06675 PF02264 LamB porin M001_RS06680 PF00294 pfkB family carbohydrate kinase M001_RS06685 PF00367 phosphotransferase system, EIIB M001_RS06685 PF02378 Phosphotransferase system, EIIC M001_RS06690 PF00251 Glycosyl hydrolases family 32 N-terminal domain M001_RS06690 PF08244 Glycosyl hydrolases family 32 C terminal M001_RS06695 PF00356 Bacterial regulatory proteins, lacI family M001_RS06695 PF13407 Periplasmic binding protein domain M001_RS06700 PF02308 MgtC family M001_RS06710 PF07992 Pyridine nucleotide-disulphide oxidoreductase M001_RS06725 PF04143 Sulphur transport M001_RS06740 PF00873 AcrB/AcrD/AcrF family M001_RS06745 PF00529 HlyD membrane-fusion protein of T1SS M001_RS06745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M001_RS06750 PF00005 ABC transporter M001_RS06750 PF02687 FtsX-like permease family M001_RS06750 PF12704 MacB-like periplasmic core domain M001_RS06755 PF00005 ABC transporter M001_RS06755 PF02687 FtsX-like permease family M001_RS06755 PF12704 MacB-like periplasmic core domain M001_RS06760 PF00005 ABC transporter M001_RS06760 PF12704 MacB-like periplasmic core domain M001_RS06760 PF02687 FtsX-like permease family M001_RS06765 PF03707 Bacterial signalling protein N terminal repeat M001_RS06765 PF00990 Diguanylate cyclase, GGDEF domain M001_RS06765 PF00563 EAL domain M001_RS06770 PF03099 Biotin/lipoate A/B protein ligase family M001_RS06770 PF10437 Bacterial lipoate protein ligase C-terminus M001_RS06780 PF13460 NAD(P)H-binding M001_RS06785 PF04355 SmpA / OmlA family M001_RS06790 PF00465 Iron-containing alcohol dehydrogenase M001_RS06795 PF01048 Phosphorylase superfamily M001_RS06800 PF00849 RNA pseudouridylate synthase M001_RS06805 PF01156 Inosine-uridine preferring nucleoside hydrolase M001_RS06820 PF07509 Protein of unknown function (DUF1523) M001_RS06825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS06825 PF00672 HAMP domain M001_RS06825 PF12729 Four helix bundle sensory module for signal transduction M001_RS06830 PF01810 LysE type translocator M001_RS06845 PF03471 Transporter associated domain M001_RS06845 PF00999 Sodium/hydrogen exchanger family M001_RS06845 PF02080 TrkA-C domain M001_RS06855 PF02557 D-alanyl-D-alanine carboxypeptidase M001_RS06860 PF07687 Peptidase dimerisation domain M001_RS06860 PF01546 Peptidase family M20/M25/M40 M001_RS06865 PF03960 ArsC family M001_RS06875 PF03606 C4-dicarboxylate anaerobic carrier M001_RS06880 PF07687 Peptidase dimerisation domain M001_RS06880 PF01546 Peptidase family M20/M25/M40 M001_RS06890 PF03605 Anaerobic c4-dicarboxylate membrane transporter M001_RS06900 PF01336 OB-fold nucleic acid binding domain M001_RS06900 PF00152 tRNA synthetases class II (D, K and N) M001_RS06915 PF00202 Aminotransferase class-III M001_RS06920 PF06968 Biotin and Thiamin Synthesis associated domain M001_RS06920 PF04055 Radical SAM superfamily M001_RS06925 PF00155 Aminotransferase class I and II M001_RS06930 PF12697 Alpha/beta hydrolase family M001_RS06930 PF08241 Methyltransferase domain M001_RS06940 PF01435 Peptidase family M48 M001_RS06945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS06945 PF08447 PAS fold M001_RS06945 PF13426 PAS domain M001_RS06950 PF03476 MOSC N-terminal beta barrel domain M001_RS06950 PF03473 MOSC domain M001_RS06950 PF00111 2Fe-2S iron-sulfur cluster binding domain M001_RS06950 PF03473 MOSC domain M001_RS06950 PF00111 2Fe-2S iron-sulfur cluster binding domain M001_RS06950 PF03476 MOSC N-terminal beta barrel domain M001_RS06960 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M001_RS06960 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M001_RS06960 PF07992 Pyridine nucleotide-disulphide oxidoreductase M001_RS06965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M001_RS06965 PF10371 Domain of unknown function M001_RS06965 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II M001_RS06965 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase M001_RS06965 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg M001_RS06980 PF01370 NAD dependent epimerase/dehydratase family M001_RS06985 PF03061 Thioesterase superfamily M001_RS06995 PF03372 Endonuclease/Exonuclease/phosphatase family M001_RS07000 PF00462 Glutaredoxin M001_RS07005 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family M001_RS07010 PF00271 Helicase conserved C-terminal domain M001_RS07010 PF04851 Type III restriction enzyme, res subunit M001_RS07015 PF00529 HlyD membrane-fusion protein of T1SS M001_RS07015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M001_RS07020 PF11742 Protein of unknown function (DUF3302) M001_RS07025 PF02554 Carbon starvation protein CstA M001_RS07030 PF00072 Response regulator receiver domain M001_RS07030 PF04397 LytTr DNA-binding domain M001_RS07035 PF06580 Histidine kinase M001_RS07035 PF07694 5TMR of 5TMR-LYT M001_RS07040 PF01966 HD domain M001_RS07045 PF00884 Sulfatase M001_RS07045 PF08019 Phosphoethanolamine transferase EptA/EptB M001_RS07050 PF01047 MarR family M001_RS07050 PF00480 ROK family M001_RS07055 PF01979 Amidohydrolase family M001_RS07060 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M001_RS07065 PF00367 phosphotransferase system, EIIB M001_RS07065 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M001_RS07065 PF02378 Phosphotransferase system, EIIC M001_RS07070 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain M001_RS07070 PF00728 Glycosyl hydrolase family 20, catalytic domain M001_RS07070 PF03173 Putative carbohydrate binding domain M001_RS07070 PF02838 Glycosyl hydrolase family 20, domain 2 M001_RS07075 PF00749 tRNA synthetases class I (E and Q), catalytic domain M001_RS07075 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M001_RS07080 PF01475 Ferric uptake regulator family M001_RS07090 PF00258 Flavodoxin M001_RS07095 PF01402 Ribbon-helix-helix protein, copG family M001_RS07105 PF12697 Alpha/beta hydrolase family M001_RS07110 PF03925 SeqA protein C-terminal domain M001_RS07110 PF17206 SeqA protein N-terminal domain M001_RS07115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M001_RS07115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M001_RS07115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M001_RS07115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M001_RS07130 PF13406 Transglycosylase SLT domain M001_RS07135 PF01066 CDP-alcohol phosphatidyltransferase M001_RS07140 PF00005 ABC transporter M001_RS07145 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS07150 PF13416 Bacterial extracellular solute-binding protein M001_RS07155 PF07992 Pyridine nucleotide-disulphide oxidoreductase M001_RS07155 PF00403 Heavy-metal-associated domain M001_RS07155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M001_RS07160 PF02627 Carboxymuconolactone decarboxylase family M001_RS07180 PF01103 Surface antigen M001_RS07180 PF07244 Surface antigen variable number repeat M001_RS07180 PF17243 POTRA domain TamA domain 1 M001_RS07185 PF04357 TamB, inner membrane protein subunit of TAM complex M001_RS07205 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M001_RS07210 PF00563 EAL domain M001_RS07210 PF03707 Bacterial signalling protein N terminal repeat M001_RS07210 PF00990 Diguanylate cyclase, GGDEF domain M001_RS07215 PF01464 Transglycosylase SLT domain M001_RS07215 PF14718 Soluble lytic murein transglycosylase L domain M001_RS07220 PF00356 Bacterial regulatory proteins, lacI family M001_RS07225 PF00793 DAHP synthetase I family M001_RS07230 PF07715 TonB-dependent Receptor Plug Domain M001_RS07230 PF00593 TonB dependent receptor M001_RS07235 PF00425 chorismate binding enzyme M001_RS07240 PF13193 AMP-binding enzyme C-terminal domain M001_RS07240 PF00501 AMP-binding enzyme M001_RS07245 PF00550 Phosphopantetheine attachment site M001_RS07245 PF00857 Isochorismatase family M001_RS07255 PF00501 AMP-binding enzyme M001_RS07255 PF00668 Condensation domain M001_RS07255 PF00550 Phosphopantetheine attachment site M001_RS07255 PF00975 Thioesterase domain M001_RS07265 PF00676 Dehydrogenase E1 component M001_RS07270 PF02780 Transketolase, C-terminal domain M001_RS07270 PF02779 Transketolase, pyrimidine binding domain M001_RS07275 PF02817 e3 binding domain M001_RS07275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M001_RS07275 PF00364 Biotin-requiring enzyme M001_RS07280 PF00313 'Cold-shock' DNA-binding domain M001_RS07305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M001_RS07310 PF08220 DeoR-like helix-turn-helix domain M001_RS07310 PF00455 DeoR C terminal sensor domain M001_RS07315 PF02901 Pyruvate formate lyase-like M001_RS07315 PF01228 Glycine radical M001_RS07320 PF04055 Radical SAM superfamily M001_RS07325 PF00923 Transaldolase/Fructose-6-phosphate aldolase M001_RS07335 PF01966 HD domain M001_RS07340 PF00849 RNA pseudouridylate synthase M001_RS07340 PF01479 S4 domain M001_RS07350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M001_RS07355 PF12850 Calcineurin-like phosphoesterase superfamily domain M001_RS07370 PF13144 Chaperone for flagella basal body P-ring formation M001_RS07375 PF00072 Response regulator receiver domain M001_RS07375 PF01584 CheW-like domain M001_RS07380 PF03705 CheR methyltransferase, all-alpha domain M001_RS07380 PF01739 CheR methyltransferase, SAM binding domain M001_RS07385 PF00460 Flagella basal body rod protein M001_RS07390 PF00460 Flagella basal body rod protein M001_RS07390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M001_RS07395 PF03963 Flagellar hook capping protein - N-terminal region M001_RS07395 PF13860 FlgD Ig-like domain M001_RS07395 PF13861 FlgD Tudor-like domain M001_RS07400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M001_RS07400 PF07559 Flagellar basal body protein FlaE M001_RS07400 PF00460 Flagella basal body rod protein M001_RS07405 PF00460 Flagella basal body rod protein M001_RS07405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M001_RS07410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M001_RS07410 PF00460 Flagella basal body rod protein M001_RS07415 PF02107 Flagellar L-ring protein M001_RS07420 PF02119 Flagellar P-ring protein M001_RS07425 PF10135 Rod binding protein M001_RS07425 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M001_RS07430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M001_RS07430 PF07196 Flagellin hook IN motif M001_RS07435 PF00669 Bacterial flagellin N-terminal helical region M001_RS07440 PF00571 CBS domain M001_RS07440 PF01769 Divalent cation transporter M001_RS07440 PF03448 MgtE intracellular N domain M001_RS07445 PF02541 Ppx/GppA phosphatase family M001_RS07450 PF13090 Polyphosphate kinase C-terminal domain 2 M001_RS07450 PF17941 Polyphosphate kinase C-terminal domain 1 M001_RS07450 PF13089 Polyphosphate kinase N-terminal domain M001_RS07450 PF02503 Polyphosphate kinase middle domain M001_RS07455 PF01842 ACT domain M001_RS07465 PF02954 Bacterial regulatory protein, Fis family M001_RS07465 PF06490 Flagellar regulatory protein FleQ M001_RS07465 PF00158 Sigma-54 interaction domain M001_RS07470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS07470 PF00512 His Kinase A (phospho-acceptor) domain M001_RS07470 PF00989 PAS fold M001_RS07475 PF00072 Response regulator receiver domain M001_RS07475 PF02954 Bacterial regulatory protein, Fis family M001_RS07475 PF00158 Sigma-54 interaction domain M001_RS07480 PF01784 NIF3 (NGG1p interacting factor 3) M001_RS07485 PF00551 Formyl transferase M001_RS07490 PF00586 AIR synthase related protein, N-terminal domain M001_RS07490 PF02769 AIR synthase related protein, C-terminal domain M001_RS07505 PF00308 Bacterial dnaA protein M001_RS07510 PF00463 Isocitrate lyase family M001_RS07515 PF01274 Malate synthase M001_RS07530 PF14437 MafB19-like deaminase M001_RS07535 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS07540 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS07545 PF00005 ABC transporter M001_RS07550 PF01895 PhoU domain M001_RS07555 PF00571 CBS domain M001_RS07555 PF01595 Cyclin M transmembrane N-terminal domain M001_RS07555 PF03471 Transporter associated domain M001_RS07565 PF02574 Homocysteine S-methyltransferase M001_RS07565 PF02310 B12 binding domain M001_RS07565 PF00809 Pterin binding enzyme M001_RS07565 PF02607 B12 binding domain M001_RS07565 PF02965 Vitamin B12 dependent methionine synthase, activation domain M001_RS07570 PF13520 Amino acid permease M001_RS07575 PF04116 Fatty acid hydroxylase superfamily M001_RS07585 PF00005 ABC transporter M001_RS07590 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS07595 PF00497 Bacterial extracellular solute-binding proteins, family 3 M001_RS07600 PF00990 Diguanylate cyclase, GGDEF domain M001_RS07605 PF07690 Major Facilitator Superfamily M001_RS07610 PF05231 MASE1 M001_RS07610 PF07730 Histidine kinase M001_RS07610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS07615 PF00196 Bacterial regulatory proteins, luxR family M001_RS07615 PF00072 Response regulator receiver domain M001_RS07620 PF14760 Rnk N-terminus M001_RS07620 PF01272 Transcription elongation factor, GreA/GreB, C-term M001_RS07635 PF00245 Alkaline phosphatase M001_RS07640 PF00245 Alkaline phosphatase M001_RS07645 PF01926 50S ribosome-binding GTPase M001_RS07650 PF00850 Histone deacetylase domain M001_RS07660 PF13307 Helicase C-terminal domain M001_RS07660 PF06733 DEAD_2 M001_RS07665 PF13609 Gram-negative porin M001_RS07670 PF02153 Prephenate dehydrogenase M001_RS07670 PF01817 Chorismate mutase type II M001_RS07675 PF00793 DAHP synthetase I family M001_RS07680 PF00483 Nucleotidyl transferase M001_RS07685 PF07549 SecD/SecF GG Motif M001_RS07685 PF02355 Protein export membrane protein M001_RS07690 PF13721 SecD export protein N-terminal TM region M001_RS07690 PF07549 SecD/SecF GG Motif M001_RS07690 PF02355 Protein export membrane protein M001_RS07725 PF01230 HIT domain M001_RS07730 PF00672 HAMP domain M001_RS07730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS07740 PF01979 Amidohydrolase family M001_RS07755 PF00375 Sodium:dicarboxylate symporter family M001_RS07760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS07760 PF00672 HAMP domain M001_RS07775 PF05661 Protein of unknown function (DUF808) M001_RS07780 PF08439 Oligopeptidase F M001_RS07780 PF01432 Peptidase family M3 M001_RS07785 PF00860 Permease family M001_RS07790 PF05728 Uncharacterised protein family (UPF0227) M001_RS07795 PF07992 Pyridine nucleotide-disulphide oxidoreductase M001_RS07805 PF04055 Radical SAM superfamily M001_RS07810 PF00990 Diguanylate cyclase, GGDEF domain M001_RS07810 PF00563 EAL domain M001_RS07810 PF03707 Bacterial signalling protein N terminal repeat M001_RS07815 PF07992 Pyridine nucleotide-disulphide oxidoreductase M001_RS07815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M001_RS07825 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain M001_RS07825 PF11974 Bacterial alpha-2-macroglobulin MG3 domain M001_RS07825 PF17962 Bacterial macroglobulin domain 6 M001_RS07825 PF00207 Alpha-2-macroglobulin family M001_RS07825 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain M001_RS07825 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain M001_RS07825 PF07703 Alpha-2-macroglobulin bait region domain M001_RS07825 PF07678 A-macroglobulin TED domain M001_RS07825 PF01835 MG2 domain M001_RS07830 PF00912 Transglycosylase M001_RS07830 PF06832 Penicillin-Binding Protein C-terminus Family M001_RS07830 PF00905 Penicillin binding protein transpeptidase domain M001_RS07840 PF02568 Thiamine biosynthesis protein (ThiI) M001_RS07840 PF02926 THUMP domain M001_RS07845 PF01609 Transposase DDE domain M001_RS07845 PF13006 Insertion element 4 transposase N-terminal M001_RS07855 PF03458 UPF0126 domain M001_RS07860 PF00700 Bacterial flagellin C-terminal helical region M001_RS07860 PF00669 Bacterial flagellin N-terminal helical region M001_RS07865 PF00700 Bacterial flagellin C-terminal helical region M001_RS07865 PF00669 Bacterial flagellin N-terminal helical region M001_RS07875 PF07195 Flagellar hook-associated protein 2 C-terminus M001_RS07875 PF07196 Flagellin hook IN motif M001_RS07875 PF02465 Flagellar hook-associated protein 2 N-terminus M001_RS07880 PF02561 Flagellar protein FliS M001_RS07905 PF03102 NeuB family M001_RS07905 PF08666 SAF domain M001_RS07915 PF02348 Cytidylyltransferase M001_RS07935 PF13193 AMP-binding enzyme C-terminal domain M001_RS07935 PF00501 AMP-binding enzyme M001_RS07950 PF00535 Glycosyl transferase family 2 M001_RS07955 PF03275 UDP-galactopyranose mutase M001_RS07960 PF00535 Glycosyl transferase family 2 M001_RS07975 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase M001_RS07975 PF00535 Glycosyl transferase family 2 M001_RS07985 PF13580 SIS domain M001_RS07990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M001_RS07990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M001_RS08000 PF01761 3-dehydroquinate synthase M001_RS08005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M001_RS08005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M001_RS08005 PF01842 ACT domain M001_RS08010 PF02348 Cytidylyltransferase M001_RS08020 PF00202 Aminotransferase class-III M001_RS08025 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M001_RS08030 PF02719 Polysaccharide biosynthesis protein M001_RS08035 PF01497 Periplasmic binding protein M001_RS08045 PF01048 Phosphorylase superfamily M001_RS08050 PF02535 ZIP Zinc transporter M001_RS08055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS08055 PF12729 Four helix bundle sensory module for signal transduction M001_RS08055 PF00672 HAMP domain M001_RS08060 PF00459 Inositol monophosphatase family M001_RS08070 PF00043 Glutathione S-transferase, C-terminal domain M001_RS08070 PF02798 Glutathione S-transferase, N-terminal domain M001_RS08075 PF07690 Major Facilitator Superfamily M001_RS08080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS08080 PF03466 LysR substrate binding domain M001_RS08085 PF02634 FdhD/NarQ family M001_RS08090 PF00384 Molybdopterin oxidoreductase M001_RS08100 PF05164 Cell division protein ZapA M001_RS08105 PF03695 Uncharacterised protein family (UPF0149) M001_RS08110 PF01494 FAD binding domain M001_RS08115 PF01494 FAD binding domain M001_RS08120 PF01571 Aminomethyltransferase folate-binding domain M001_RS08120 PF08669 Glycine cleavage T-protein C-terminal barrel domain M001_RS08125 PF01597 Glycine cleavage H-protein M001_RS08130 PF02347 Glycine cleavage system P-protein M001_RS08135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS08135 PF08447 PAS fold M001_RS08150 PF00324 Amino acid permease M001_RS08160 PF03618 Kinase/pyrophosphorylase M001_RS08165 PF02896 PEP-utilising enzyme, TIM barrel domain M001_RS08165 PF00391 PEP-utilising enzyme, mobile domain M001_RS08165 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M001_RS08170 PF01609 Transposase DDE domain M001_RS08170 PF13006 Insertion element 4 transposase N-terminal M001_RS08180 PF01483 Proprotein convertase P-domain M001_RS08180 PF00082 Subtilase family M001_RS08185 PF03180 NLPA lipoprotein M001_RS08190 PF11893 Domain of unknown function (DUF3413) M001_RS08190 PF00884 Sulfatase M001_RS08195 PF07208 Protein of unknown function (DUF1414) M001_RS08200 PF04245 37-kD nucleoid-associated bacterial protein M001_RS08205 PF01547 Bacterial extracellular solute-binding protein M001_RS08210 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS08210 PF14785 Maltose transport system permease protein MalF P2 domain M001_RS08215 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS08220 PF08402 TOBE domain M001_RS08220 PF00005 ABC transporter M001_RS08225 PF03976 Polyphosphate kinase 2 (PPK2) M001_RS08230 PF00561 alpha/beta hydrolase fold M001_RS08235 PF13006 Insertion element 4 transposase N-terminal M001_RS08235 PF01609 Transposase DDE domain M001_RS08245 PF01594 AI-2E family transporter M001_RS08255 PF01435 Peptidase family M48 M001_RS08255 PF07720 Tetratricopeptide repeat M001_RS08260 PF00578 AhpC/TSA family M001_RS08265 PF03960 ArsC family M001_RS08275 PF04336 Acyl carrier protein phosphodiesterase M001_RS08285 PF00497 Bacterial extracellular solute-binding proteins, family 3 M001_RS08290 PF01979 Amidohydrolase family M001_RS08295 PF03956 Lysine exporter LysO M001_RS08300 PF00005 ABC transporter M001_RS08305 PF00497 Bacterial extracellular solute-binding proteins, family 3 M001_RS08310 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS08315 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS08320 PF00849 RNA pseudouridylate synthase M001_RS08330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M001_RS08335 PF04209 homogentisate 1,2-dioxygenase M001_RS08345 PF02798 Glutathione S-transferase, N-terminal domain M001_RS08345 PF14497 Glutathione S-transferase, C-terminal domain M001_RS08360 PF13537 Glutamine amidotransferase domain M001_RS08360 PF00733 Asparagine synthase M001_RS08370 PF00999 Sodium/hydrogen exchanger family M001_RS08370 PF02254 TrkA-N domain M001_RS08375 PF13344 Haloacid dehalogenase-like hydrolase M001_RS08380 PF00962 Adenosine/AMP deaminase M001_RS08385 PF08240 Alcohol dehydrogenase GroES-like domain M001_RS08385 PF00107 Zinc-binding dehydrogenase M001_RS08390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M001_RS08395 PF03741 Integral membrane protein TerC family M001_RS08395 PF03471 Transporter associated domain M001_RS08405 PF02913 FAD linked oxidases, C-terminal domain M001_RS08405 PF01565 FAD binding domain M001_RS08405 PF13183 4Fe-4S dicluster domain M001_RS08415 PF03061 Thioesterase superfamily M001_RS08420 PF00270 DEAD/DEAH box helicase M001_RS08420 PF03880 DbpA RNA binding domain M001_RS08420 PF00271 Helicase conserved C-terminal domain M001_RS08430 PF03707 Bacterial signalling protein N terminal repeat M001_RS08430 PF00990 Diguanylate cyclase, GGDEF domain M001_RS08430 PF00563 EAL domain M001_RS08430 PF13188 PAS domain M001_RS08435 PF01966 HD domain M001_RS08440 PF00072 Response regulator receiver domain M001_RS08450 PF00361 Proton-conducting membrane transporter M001_RS08455 PF00361 Proton-conducting membrane transporter M001_RS08460 PF00361 Proton-conducting membrane transporter M001_RS08460 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M001_RS08465 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M001_RS08470 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M001_RS08475 PF12838 4Fe-4S dicluster domain M001_RS08480 PF00146 NADH dehydrogenase M001_RS08485 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M001_RS08485 PF00384 Molybdopterin oxidoreductase M001_RS08485 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M001_RS08490 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M001_RS08490 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M001_RS08500 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M001_RS08500 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M001_RS08505 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M001_RS08510 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M001_RS08530 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M001_RS08530 PF00326 Prolyl oligopeptidase family M001_RS08535 PF00593 TonB dependent receptor M001_RS08535 PF07715 TonB-dependent Receptor Plug Domain M001_RS08540 PF00691 OmpA family M001_RS08540 PF13677 Membrane MotB of proton-channel complex MotA/MotB M001_RS08545 PF01618 MotA/TolQ/ExbB proton channel family M001_RS08560 PF04536 TPM domain M001_RS08570 PF03411 Penicillin-insensitive murein endopeptidase M001_RS08575 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS08580 PF00497 Bacterial extracellular solute-binding proteins, family 3 M001_RS08585 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS08590 PF00005 ABC transporter M001_RS08600 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) M001_RS08605 PF00248 Aldo/keto reductase family M001_RS08615 PF00106 short chain dehydrogenase M001_RS08620 PF01212 Beta-eliminating lyase M001_RS08630 PF00072 Response regulator receiver domain M001_RS08635 PF03466 LysR substrate binding domain M001_RS08635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS08640 PF13188 PAS domain M001_RS08640 PF03707 Bacterial signalling protein N terminal repeat M001_RS08640 PF00990 Diguanylate cyclase, GGDEF domain M001_RS08640 PF00563 EAL domain M001_RS08645 PF03806 AbgT putative transporter family M001_RS08650 PF00881 Nitroreductase family M001_RS08665 PF07690 Major Facilitator Superfamily M001_RS08670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS08670 PF03466 LysR substrate binding domain M001_RS08675 PF03466 LysR substrate binding domain M001_RS08675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS08680 PF00925 GTP cyclohydrolase II M001_RS08685 PF02224 Cytidylate kinase M001_RS08690 PF00575 S1 RNA binding domain M001_RS08695 PF00216 Bacterial DNA-binding protein M001_RS08705 PF18073 Rubredoxin metal binding domain M001_RS08710 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M001_RS08725 PF06508 Queuosine biosynthesis protein QueC M001_RS08730 PF04055 Radical SAM superfamily M001_RS08735 PF12843 Putative quorum-sensing-regulated virulence factor M001_RS08740 PF01923 Cobalamin adenosyltransferase M001_RS08745 PF00816 H-NS histone family M001_RS08750 PF03553 Na+/H+ antiporter family M001_RS08755 PF00265 Thymidine kinase M001_RS08770 PF10722 Putative bacterial sensory transduction regulator M001_RS08780 PF13662 Toprim domain M001_RS08780 PF02132 RecR protein M001_RS08785 PF00183 Hsp90 protein M001_RS08785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS08790 PF00005 ABC transporter M001_RS08795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M001_RS08795 PF00005 ABC transporter M001_RS08800 PF12911 N-terminal TM domain of oligopeptide transport permease C M001_RS08800 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS08805 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS08810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M001_RS08815 PF00158 Sigma-54 interaction domain M001_RS08815 PF02954 Bacterial regulatory protein, Fis family M001_RS08820 PF04012 PspA/IM30 family M001_RS08825 PF06667 Phage shock protein B M001_RS08835 PF04317 YcjX-like family, DUF463 M001_RS08840 PF05128 Domain of unknown function (DUF697) M001_RS08845 PF00351 Biopterin-dependent aromatic amino acid hydroxylase M001_RS08850 PF01329 Pterin 4 alpha carbinolamine dehydratase M001_RS08855 PF18024 Helix-turn-helix domain M001_RS08855 PF00158 Sigma-54 interaction domain M001_RS08865 PF00990 Diguanylate cyclase, GGDEF domain M001_RS08865 PF17152 Periplasmic sensor domain M001_RS08870 PF00691 OmpA family M001_RS08875 PF03741 Integral membrane protein TerC family M001_RS08885 PF08891 YfcL protein M001_RS08890 PF00501 AMP-binding enzyme M001_RS08895 PF01053 Cys/Met metabolism PLP-dependent enzyme M001_RS08905 PF13460 NAD(P)H-binding M001_RS08910 PF03466 LysR substrate binding domain M001_RS08910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS08915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS08915 PF03466 LysR substrate binding domain M001_RS08920 PF07690 Major Facilitator Superfamily M001_RS08925 PF05726 Pirin C-terminal cupin domain M001_RS08925 PF02678 Pirin M001_RS08930 PF00857 Isochorismatase family M001_RS08935 PF03466 LysR substrate binding domain M001_RS08935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS08940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS08940 PF03466 LysR substrate binding domain M001_RS08945 PF01717 Cobalamin-independent synthase, Catalytic domain M001_RS08945 PF08267 Cobalamin-independent synthase, N-terminal domain M001_RS08955 PF03466 LysR substrate binding domain M001_RS08955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS08960 PF00232 Glycosyl hydrolase family 1 M001_RS08965 PF18381 YcaO cyclodehydratase C-terminal domain M001_RS08965 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding M001_RS08970 PF01226 Formate/nitrite transporter M001_RS08975 PF01228 Glycine radical M001_RS08975 PF02901 Pyruvate formate lyase-like M001_RS08980 PF03692 Putative zinc- or iron-chelating domain M001_RS08995 PF00343 Carbohydrate phosphorylase M001_RS09000 PF00939 Sodium:sulfate symporter transmembrane region M001_RS09005 PF00085 Thioredoxin M001_RS09010 PF01627 Hpt domain M001_RS09010 PF00512 His Kinase A (phospho-acceptor) domain M001_RS09010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M001_RS09010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS09010 PF00072 Response regulator receiver domain M001_RS09010 PF00672 HAMP domain M001_RS09015 PF00005 ABC transporter M001_RS09015 PF00664 ABC transporter transmembrane region M001_RS09020 PF00005 ABC transporter M001_RS09020 PF00664 ABC transporter transmembrane region M001_RS09045 PF08543 Phosphomethylpyrimidine kinase M001_RS09050 PF01609 Transposase DDE domain M001_RS09050 PF13006 Insertion element 4 transposase N-terminal M001_RS09055 PF00465 Iron-containing alcohol dehydrogenase M001_RS09070 PF13673 Acetyltransferase (GNAT) domain M001_RS09080 PF00285 Citrate synthase, C-terminal domain M001_RS09085 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M001_RS09090 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M001_RS09095 PF00890 FAD binding domain M001_RS09095 PF02910 Fumarate reductase flavoprotein C-term M001_RS09100 PF13085 2Fe-2S iron-sulfur cluster binding domain M001_RS09105 PF00676 Dehydrogenase E1 component M001_RS09105 PF16078 2-oxoglutarate dehydrogenase N-terminus M001_RS09105 PF02779 Transketolase, pyrimidine binding domain M001_RS09105 PF16870 2-oxoglutarate dehydrogenase C-terminal M001_RS09110 PF02817 e3 binding domain M001_RS09110 PF00364 Biotin-requiring enzyme M001_RS09110 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M001_RS09115 PF00549 CoA-ligase M001_RS09115 PF08442 ATP-grasp domain M001_RS09120 PF00549 CoA-ligase M001_RS09120 PF02629 CoA binding domain M001_RS09130 PF01266 FAD dependent oxidoreductase M001_RS09135 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS09140 PF00005 ABC transporter M001_RS09150 PF07702 UTRA domain M001_RS09150 PF00392 Bacterial regulatory proteins, gntR family M001_RS09155 PF00266 Aminotransferase class-V M001_RS09160 PF00202 Aminotransferase class-III M001_RS09180 PF03918 Cytochrome C biogenesis protein M001_RS09185 PF08534 Redoxin M001_RS09190 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M001_RS09190 PF01578 Cytochrome C assembly protein M001_RS09195 PF03916 Polysulphide reductase, NrfD M001_RS09200 PF00037 4Fe-4S binding domain M001_RS09200 PF13247 4Fe-4S dicluster domain M001_RS09205 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) M001_RS09205 PF13435 Cytochrome c554 and c-prime M001_RS09210 PF02335 Cytochrome c552 M001_RS09220 PF02754 Cysteine-rich domain M001_RS09220 PF13183 4Fe-4S dicluster domain M001_RS09225 PF00890 FAD binding domain M001_RS09230 PF01266 FAD dependent oxidoreductase M001_RS09230 PF04324 BFD-like [2Fe-2S] binding domain M001_RS09235 PF02810 SEC-C motif M001_RS09240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS09240 PF17200 Single Cache domain 2 M001_RS09240 PF00672 HAMP domain M001_RS09245 PF00480 ROK family M001_RS09245 PF01047 MarR family M001_RS09255 PF01925 Sulfite exporter TauE/SafE M001_RS09260 PF03466 LysR substrate binding domain M001_RS09260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS09265 PF00892 EamA-like transporter family M001_RS09270 PF12833 Helix-turn-helix domain M001_RS09270 PF14525 AraC-binding-like domain M001_RS09275 PF11398 Protein of unknown function (DUF2813) M001_RS09285 PF00128 Alpha amylase, catalytic domain M001_RS09285 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M001_RS09325 PF00883 Cytosol aminopeptidase family, catalytic domain M001_RS09325 PF02789 Cytosol aminopeptidase family, N-terminal domain M001_RS09330 PF13419 Haloacid dehalogenase-like hydrolase M001_RS09345 PF01207 Dihydrouridine synthase (Dus) M001_RS09350 PF04304 Protein of unknown function (DUF454) M001_RS09355 PF00156 Phosphoribosyl transferase domain M001_RS09360 PF12169 DNA polymerase III subunits gamma and tau domain III M001_RS09360 PF12170 DNA polymerase III tau subunit V interacting with alpha M001_RS09360 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M001_RS09365 PF02575 YbaB/EbfC DNA-binding family M001_RS09370 PF01261 Xylose isomerase-like TIM barrel M001_RS09375 PF03466 LysR substrate binding domain M001_RS09375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS09385 PF03279 Bacterial lipid A biosynthesis acyltransferase M001_RS09395 PF03279 Bacterial lipid A biosynthesis acyltransferase M001_RS09410 PF17151 Periplasmic sensor domain M001_RS09410 PF00990 Diguanylate cyclase, GGDEF domain M001_RS09420 PF03104 DNA polymerase family B, exonuclease domain M001_RS09420 PF00136 DNA polymerase family B M001_RS09435 PF01863 Protein of unknown function DUF45 M001_RS09450 PF03606 C4-dicarboxylate anaerobic carrier M001_RS09465 PF01266 FAD dependent oxidoreductase M001_RS09465 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M001_RS09470 PF02801 Beta-ketoacyl synthase, C-terminal domain M001_RS09470 PF00109 Beta-ketoacyl synthase, N-terminal domain M001_RS09480 PF02080 TrkA-C domain M001_RS09480 PF06826 Predicted Permease Membrane Region M001_RS09495 PF12344 Ultra-violet resistance protein B M001_RS09495 PF04851 Type III restriction enzyme, res subunit M001_RS09495 PF02151 UvrB/uvrC motif M001_RS09495 PF17757 UvrB interaction domain M001_RS09495 PF00271 Helicase conserved C-terminal domain M001_RS09505 PF09335 SNARE associated Golgi protein M001_RS09510 PF02600 Disulfide bond formation protein DsbB M001_RS09515 PF06450 Bacterial Na+/H+ antiporter B (NhaB) M001_RS09520 PF07840 FadR C-terminal domain M001_RS09520 PF00392 Bacterial regulatory proteins, gntR family M001_RS09530 PF07152 YaeQ protein M001_RS09600 PF01554 MatE M001_RS09605 PF06786 Uncharacterised protein family (UPF0253) M001_RS09615 PF00677 Lumazine binding domain M001_RS09625 PF13419 Haloacid dehalogenase-like hydrolase M001_RS09630 PF02222 ATP-grasp domain M001_RS09630 PF01370 NAD dependent epimerase/dehydratase family M001_RS09635 PF00892 EamA-like transporter family M001_RS09640 PF02525 Flavodoxin-like fold M001_RS09665 PF17783 CvfB-like winged helix domain M001_RS09665 PF13509 S1 domain M001_RS09675 PF04269 Protein of unknown function, DUF440 M001_RS09680 PF00912 Transglycosylase M001_RS09685 PF04269 Protein of unknown function, DUF440 M001_RS09690 PF03776 Septum formation topological specificity factor MinE M001_RS09695 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M001_RS09700 PF03775 Septum formation inhibitor MinC, C-terminal domain M001_RS09700 PF05209 Septum formation inhibitor MinC, N-terminal domain M001_RS09705 PF05166 YcgL domain M001_RS09710 PF03313 Serine dehydratase alpha chain M001_RS09710 PF03315 Serine dehydratase beta chain M001_RS09715 PF03313 Serine dehydratase alpha chain M001_RS09715 PF03315 Serine dehydratase beta chain M001_RS09720 PF06865 Pyrimidine/purine nucleoside phosphorylase M001_RS09725 PF00375 Sodium:dicarboxylate symporter family M001_RS09730 PF00365 Phosphofructokinase M001_RS09735 PF00121 Triosephosphate isomerase M001_RS09740 PF02698 DUF218 domain M001_RS09745 PF13847 Methyltransferase domain M001_RS09750 PF03882 MukF winged-helix domain M001_RS09750 PF17193 MukF C-terminal domain M001_RS09750 PF17192 MukF middle domain M001_RS09755 PF04288 MukE-like family M001_RS09760 PF04310 MukB N-terminal M001_RS09760 PF16330 MukB hinge domain M001_RS09765 PF03330 Lytic transglycolase M001_RS09765 PF05036 Sporulation related domain M001_RS09785 PF01327 Polypeptide deformylase M001_RS09815 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M001_RS09815 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M001_RS09820 PF00291 Pyridoxal-phosphate dependent enzyme M001_RS09825 PF01546 Peptidase family M20/M25/M40 M001_RS09825 PF07687 Peptidase dimerisation domain M001_RS09830 PF01979 Amidohydrolase family M001_RS09835 PF00696 Amino acid kinase family M001_RS09840 PF07690 Major Facilitator Superfamily M001_RS09845 PF00005 ABC transporter M001_RS09850 PF01032 FecCD transport family M001_RS09860 PF00892 EamA-like transporter family M001_RS09865 PF01699 Sodium/calcium exchanger protein M001_RS09870 PF13478 XdhC Rossmann domain M001_RS09870 PF02625 XdhC and CoxI family M001_RS09880 PF12804 MobA-like NTP transferase domain M001_RS09885 PF07992 Pyridine nucleotide-disulphide oxidoreductase M001_RS09885 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M001_RS09890 PF01979 Amidohydrolase family M001_RS09895 PF00941 FAD binding domain in molybdopterin dehydrogenase M001_RS09900 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M001_RS09900 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M001_RS09900 PF01799 [2Fe-2S] binding domain M001_RS09905 PF00860 Permease family M001_RS09910 PF01979 Amidohydrolase family M001_RS09915 PF00860 Permease family M001_RS09920 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M001_RS09920 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M001_RS09925 PF00941 FAD binding domain in molybdopterin dehydrogenase M001_RS09925 PF03450 CO dehydrogenase flavoprotein C-terminal domain M001_RS09930 PF00111 2Fe-2S iron-sulfur cluster binding domain M001_RS09930 PF01799 [2Fe-2S] binding domain M001_RS09935 PF05433 Glycine zipper 2TM domain M001_RS09945 PF03606 C4-dicarboxylate anaerobic carrier M001_RS09950 PF00501 AMP-binding enzyme M001_RS09950 PF13193 AMP-binding enzyme C-terminal domain M001_RS09955 PF00990 Diguanylate cyclase, GGDEF domain M001_RS09955 PF07694 5TMR of 5TMR-LYT M001_RS09965 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M001_RS09965 PF01502 Phosphoribosyl-AMP cyclohydrolase M001_RS09970 PF00977 Histidine biosynthesis protein M001_RS09975 PF00977 Histidine biosynthesis protein M001_RS09980 PF00117 Glutamine amidotransferase class-I M001_RS09985 PF08645 Polynucleotide kinase 3 phosphatase M001_RS09985 PF00475 Imidazoleglycerol-phosphate dehydratase M001_RS09990 PF00155 Aminotransferase class I and II M001_RS09995 PF00815 Histidinol dehydrogenase M001_RS10000 PF08029 HisG, C-terminal domain M001_RS10000 PF01634 ATP phosphoribosyltransferase M001_RS10010 PF13307 Helicase C-terminal domain M001_RS10010 PF04851 Type III restriction enzyme, res subunit M001_RS10015 PF00814 Glycoprotease family M001_RS10025 PF12697 Alpha/beta hydrolase family M001_RS10030 PF13193 AMP-binding enzyme C-terminal domain M001_RS10030 PF00501 AMP-binding enzyme M001_RS10035 PF01612 3'-5' exonuclease M001_RS10035 PF00570 HRDC domain M001_RS10040 PF00753 Metallo-beta-lactamase superfamily M001_RS10050 PF00586 AIR synthase related protein, N-terminal domain M001_RS10050 PF02769 AIR synthase related protein, C-terminal domain M001_RS10060 PF10672 S-adenosylmethionine-dependent methyltransferase M001_RS10060 PF17785 PUA-like domain M001_RS10065 PF12729 Four helix bundle sensory module for signal transduction M001_RS10065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS10065 PF00672 HAMP domain M001_RS10070 PF00708 Acylphosphatase M001_RS10080 PF13006 Insertion element 4 transposase N-terminal M001_RS10080 PF01609 Transposase DDE domain M001_RS10085 PF08264 Anticodon-binding domain of tRNA M001_RS10085 PF09334 tRNA synthetases class I (M) M001_RS10085 PF01588 Putative tRNA binding domain M001_RS10090 PF10609 NUBPL iron-transfer P-loop NTPase M001_RS10095 PF00485 Phosphoribulokinase / Uridine kinase family M001_RS10100 PF00692 dUTPase M001_RS10105 PF01384 Phosphate transporter family M001_RS10110 PF06945 Protein of unknown function (DUF1289) M001_RS10115 PF06725 3D domain M001_RS10115 PF03562 MltA specific insert domain M001_RS10120 PF00111 2Fe-2S iron-sulfur cluster binding domain M001_RS10125 PF00268 Ribonucleotide reductase, small chain M001_RS10130 PF03477 ATP cone domain M001_RS10130 PF02867 Ribonucleotide reductase, barrel domain M001_RS10130 PF00317 Ribonucleotide reductase, all-alpha domain M001_RS10135 PF13419 Haloacid dehalogenase-like hydrolase M001_RS10145 PF00521 DNA gyrase/topoisomerase IV, subunit A M001_RS10145 PF03989 DNA gyrase C-terminal domain, beta-propeller M001_RS10150 PF00128 Alpha amylase, catalytic domain M001_RS10160 PF04055 Radical SAM superfamily M001_RS10170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M001_RS10170 PF02824 TGS domain M001_RS10170 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M001_RS10170 PF03129 Anticodon binding domain M001_RS10175 PF00707 Translation initiation factor IF-3, C-terminal domain M001_RS10175 PF05198 Translation initiation factor IF-3, N-terminal domain M001_RS10180 PF01632 Ribosomal protein L35 M001_RS10185 PF00453 Ribosomal protein L20 M001_RS10190 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M001_RS10190 PF01409 tRNA synthetases class II core domain (F) M001_RS10195 PF03483 B3/4 domain M001_RS10195 PF01588 Putative tRNA binding domain M001_RS10195 PF03147 Ferredoxin-fold anticodon binding domain M001_RS10195 PF03484 tRNA synthetase B5 domain M001_RS10195 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M001_RS10200 PF00216 Bacterial DNA-binding protein M001_RS10205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS10205 PF00512 His Kinase A (phospho-acceptor) domain M001_RS10205 PF09456 RcsC Alpha-Beta-Loop (ABL) M001_RS10205 PF00072 Response regulator receiver domain M001_RS10220 PF02146 Sir2 family M001_RS10230 PF17152 Periplasmic sensor domain M001_RS10230 PF00990 Diguanylate cyclase, GGDEF domain M001_RS10235 PF00356 Bacterial regulatory proteins, lacI family M001_RS10240 PF00294 pfkB family carbohydrate kinase M001_RS10245 PF13407 Periplasmic binding protein domain M001_RS10250 PF02653 Branched-chain amino acid transport system / permease component M001_RS10255 PF00005 ABC transporter M001_RS10260 PF05025 RbsD / FucU transport protein family M001_RS10265 PF00043 Glutathione S-transferase, C-terminal domain M001_RS10265 PF02798 Glutathione S-transferase, N-terminal domain M001_RS10280 PF13416 Bacterial extracellular solute-binding protein M001_RS10285 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS10290 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS10295 PF08402 TOBE domain M001_RS10295 PF00005 ABC transporter M001_RS10310 PF01171 PP-loop family M001_RS10315 PF00582 Universal stress protein family M001_RS10320 PF00027 Cyclic nucleotide-binding domain M001_RS10320 PF13545 Crp-like helix-turn-helix domain M001_RS10335 PF00403 Heavy-metal-associated domain M001_RS10345 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP M001_RS10345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M001_RS10360 PF00115 Cytochrome C and Quinol oxidase polypeptide I M001_RS10370 PF13185 GAF domain M001_RS10375 PF17516 ProQ C-terminal domain M001_RS10375 PF04352 ProQ/FINO family M001_RS10380 PF00595 PDZ domain M001_RS10380 PF11818 C-terminal domain of tail specific protease (DUF3340) M001_RS10380 PF03572 Peptidase family S41 M001_RS10380 PF17804 Tail specific protease N-terminal domain M001_RS10385 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M001_RS10385 PF01433 Peptidase family M1 domain M001_RS10385 PF11940 Domain of unknown function (DUF3458) Ig-like fold M001_RS10395 PF05088 Bacterial NAD-glutamate dehydrogenase M001_RS10400 PF01180 Dihydroorotate dehydrogenase M001_RS10405 PF07126 Cell-division protein ZapC M001_RS10415 PF01197 Ribosomal protein L31 M001_RS10420 PF00444 Ribosomal protein L36 M001_RS10425 PF10672 S-adenosylmethionine-dependent methyltransferase M001_RS10425 PF02926 THUMP domain M001_RS10425 PF01170 Putative RNA methylase family UPF0020 M001_RS10440 PF04957 Ribosome modulation factor M001_RS10445 PF07977 FabA-like domain M001_RS10450 PF05362 Lon protease (S16) C-terminal proteolytic domain M001_RS10450 PF13654 AAA domain M001_RS10495 PF05707 Zonular occludens toxin (Zot) M001_RS10530 PF07130 YebG protein M001_RS10535 PF01674 Lipase (class 2) M001_RS10540 PF00106 short chain dehydrogenase M001_RS10565 PF06974 Protein of unknown function (DUF1298) M001_RS10565 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain M001_RS10580 PF13006 Insertion element 4 transposase N-terminal M001_RS10580 PF01609 Transposase DDE domain M001_RS10585 PF03972 MmgE/PrpD family M001_RS10590 PF00285 Citrate synthase, C-terminal domain M001_RS10605 PF04403 Paraquat-inducible protein A M001_RS10610 PF02470 MlaD protein M001_RS10615 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF M001_RS10615 PF01189 16S rRNA methyltransferase RsmB/F M001_RS10615 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF M001_RS10625 PF00589 Phage integrase family M001_RS10630 PF01026 TatD related DNase M001_RS10635 PF09115 DNA polymerase III, delta subunit, C terminal M001_RS10640 PF02223 Thymidylate kinase M001_RS10645 PF02618 YceG-like family M001_RS10650 PF01063 Amino-transferase class IV M001_RS10655 PF00109 Beta-ketoacyl synthase, N-terminal domain M001_RS10655 PF02801 Beta-ketoacyl synthase, C-terminal domain M001_RS10660 PF00550 Phosphopantetheine attachment site M001_RS10670 PF00698 Acyl transferase domain M001_RS10675 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M001_RS10675 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M001_RS10680 PF02504 Fatty acid synthesis protein M001_RS10685 PF01783 Ribosomal L32p protein family M001_RS10690 PF02620 Large ribosomal RNA subunit accumulation protein YceD M001_RS10695 PF02545 Maf-like protein M001_RS10700 PF13419 Haloacid dehalogenase-like hydrolase M001_RS10705 PF01479 S4 domain M001_RS10705 PF00849 RNA pseudouridylate synthase M001_RS10710 PF10150 Ribonuclease E/G family M001_RS10710 PF00575 S1 RNA binding domain M001_RS10710 PF12111 Polyribonucleotide phosphorylase C terminal M001_RS10720 PF02378 Phosphotransferase system, EIIC M001_RS10720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M001_RS10725 PF00294 pfkB family carbohydrate kinase M001_RS10730 PF00381 PTS HPr component phosphorylation site M001_RS10730 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M001_RS10735 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M001_RS10735 PF00356 Bacterial regulatory proteins, lacI family M001_RS10740 PF03222 Tryptophan/tyrosine permease family M001_RS10750 PF01124 MAPEG family M001_RS10760 PF00271 Helicase conserved C-terminal domain M001_RS10760 PF00270 DEAD/DEAH box helicase M001_RS10770 PF01264 Chorismate synthase M001_RS10775 PF05175 Methyltransferase small domain M001_RS10780 PF01713 Smr domain M001_RS10785 PF00990 Diguanylate cyclase, GGDEF domain M001_RS10785 PF08448 PAS fold M001_RS10790 PF00300 Histidine phosphatase superfamily (branch 1) M001_RS10800 PF00704 Glycosyl hydrolases family 18 M001_RS10800 PF08329 Chitinase A, N-terminal domain M001_RS10810 PF08274 PhnA Zinc-Ribbon M001_RS10810 PF03831 PhnA domain M001_RS10820 PF00425 chorismate binding enzyme M001_RS10820 PF04715 Anthranilate synthase component I, N terminal region M001_RS10825 PF00293 NUDIX domain M001_RS10830 PF03222 Tryptophan/tyrosine permease family M001_RS10840 PF00375 Sodium:dicarboxylate symporter family M001_RS10845 PF00270 DEAD/DEAH box helicase M001_RS10845 PF00271 Helicase conserved C-terminal domain M001_RS10845 PF00570 HRDC domain M001_RS10845 PF09382 RQC domain M001_RS10845 PF16124 RecQ zinc-binding M001_RS10850 PF08298 PrkA AAA domain M001_RS10850 PF06798 PrkA serine protein kinase C-terminal domain M001_RS10855 PF04285 Protein of unknown function (DUF444) M001_RS10860 PF04293 SpoVR like protein M001_RS10865 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M001_RS10865 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M001_RS10865 PF00378 Enoyl-CoA hydratase/isomerase M001_RS10870 PF00108 Thiolase, N-terminal domain M001_RS10870 PF02803 Thiolase, C-terminal domain M001_RS10875 PF07726 ATPase family associated with various cellular activities (AAA) M001_RS10875 PF17863 AAA lid domain M001_RS10880 PF01882 Protein of unknown function DUF58 M001_RS10895 PF13519 von Willebrand factor type A domain M001_RS10905 PF04542 Sigma-70 region 2 M001_RS10905 PF08281 Sigma-70, region 4 M001_RS10915 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M001_RS10920 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M001_RS10925 PF00563 EAL domain M001_RS10925 PF08668 HDOD domain M001_RS10930 PF02803 Thiolase, C-terminal domain M001_RS10930 PF00108 Thiolase, N-terminal domain M001_RS10935 PF09278 MerR, DNA binding M001_RS10935 PF00376 MerR family regulatory protein M001_RS10940 PF01386 Ribosomal L25p family M001_RS10950 PF00271 Helicase conserved C-terminal domain M001_RS10950 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M001_RS10950 PF04408 Helicase associated domain (HA2) M001_RS10950 PF11898 Domain of unknown function (DUF3418) M001_RS10950 PF00270 DEAD/DEAH box helicase M001_RS10955 PF01743 Poly A polymerase head domain M001_RS10955 PF02272 DHHA1 domain M001_RS10955 PF01368 DHH family M001_RS10955 PF00571 CBS domain M001_RS10960 PF01966 HD domain M001_RS10965 PF00884 Sulfatase M001_RS10970 PF07726 ATPase family associated with various cellular activities (AAA) M001_RS10970 PF17863 AAA lid domain M001_RS10985 PF07584 Aerotolerance regulator N-terminal M001_RS10985 PF13519 von Willebrand factor type A domain M001_RS10990 PF13519 von Willebrand factor type A domain M001_RS10990 PF07584 Aerotolerance regulator N-terminal M001_RS11000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS11000 PF03466 LysR substrate binding domain M001_RS11005 PF03781 Sulfatase-modifying factor enzyme 1 M001_RS11015 PF04055 Radical SAM superfamily M001_RS11015 PF13186 Iron-sulfur cluster-binding domain M001_RS11020 PF00929 Exonuclease M001_RS11020 PF08411 Exonuclease C-terminal M001_RS11035 PF03788 LrgA family M001_RS11040 PF04172 LrgB-like family M001_RS11045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M001_RS11045 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region M001_RS11050 PF01212 Beta-eliminating lyase M001_RS11060 PF04244 Deoxyribodipyrimidine photo-lyase-related protein M001_RS11065 PF01266 FAD dependent oxidoreductase M001_RS11070 PF02774 Semialdehyde dehydrogenase, dimerisation domain M001_RS11070 PF01118 Semialdehyde dehydrogenase, NAD binding domain M001_RS11075 PF02634 FdhD/NarQ family M001_RS11080 PF02954 Bacterial regulatory protein, Fis family M001_RS11080 PF00158 Sigma-54 interaction domain M001_RS11080 PF01590 GAF domain M001_RS11095 PF13247 4Fe-4S dicluster domain M001_RS11095 PF12800 4Fe-4S binding domain M001_RS11110 PF00583 Acetyltransferase (GNAT) family M001_RS11115 PF02705 K+ potassium transporter M001_RS11120 PF00037 4Fe-4S binding domain M001_RS11120 PF12798 4Fe-4S binding domain M001_RS11125 PF00361 Proton-conducting membrane transporter M001_RS11130 PF00146 NADH dehydrogenase M001_RS11135 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M001_RS11135 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M001_RS11135 PF00374 Nickel-dependent hydrogenase M001_RS11140 PF12838 4Fe-4S dicluster domain M001_RS11145 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M001_RS11150 PF07450 Formate hydrogenlyase maturation protein HycH M001_RS11155 PF01750 Hydrogenase maturation protease M001_RS11165 PF12390 Selenocysteine synthase N terminal M001_RS11165 PF03841 L-seryl-tRNA selenium transferase M001_RS11170 PF00009 Elongation factor Tu GTP binding domain M001_RS11170 PF09106 Elongation factor SelB, winged helix M001_RS11170 PF09107 Elongation factor SelB, winged helix M001_RS11170 PF03144 Elongation factor Tu domain 2 M001_RS11175 PF01300 Telomere recombination M001_RS11175 PF07503 HypF finger M001_RS11175 PF17788 HypF Kae1-like domain M001_RS11175 PF00708 Acylphosphatase M001_RS11180 PF01455 HupF/HypC family M001_RS11185 PF01924 Hydrogenase formation hypA family M001_RS11190 PF00586 AIR synthase related protein, N-terminal domain M001_RS11190 PF02769 AIR synthase related protein, C-terminal domain M001_RS11195 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA M001_RS11200 PF02492 CobW/HypB/UreG, nucleotide-binding domain M001_RS11205 PF00005 ABC transporter M001_RS11210 PF00005 ABC transporter M001_RS11215 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS11215 PF12911 N-terminal TM domain of oligopeptide transport permease C M001_RS11220 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS11225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M001_RS11230 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE M001_RS11235 PF01750 Hydrogenase maturation protease M001_RS11240 PF00374 Nickel-dependent hydrogenase M001_RS11245 PF03916 Polysulphide reductase, NrfD M001_RS11250 PF13247 4Fe-4S dicluster domain M001_RS11255 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M001_RS11255 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal M001_RS11260 PF00990 Diguanylate cyclase, GGDEF domain M001_RS11260 PF01590 GAF domain M001_RS11260 PF00360 Phytochrome region M001_RS11260 PF00563 EAL domain M001_RS11265 PF00534 Glycosyl transferases group 1 M001_RS11265 PF00862 Sucrose synthase M001_RS11270 PF00534 Glycosyl transferases group 1 M001_RS11270 PF13439 Glycosyltransferase Family 4 M001_RS11340 PF13439 Glycosyltransferase Family 4 M001_RS11340 PF00534 Glycosyl transferases group 1 M001_RS11345 PF00535 Glycosyl transferase family 2 M001_RS11345 PF07238 PilZ domain M001_RS11345 PF03552 Cellulose synthase M001_RS11350 PF02397 Bacterial sugar transferase M001_RS11355 PF00534 Glycosyl transferases group 1 M001_RS11360 PF00211 Adenylate and Guanylate cyclase catalytic domain M001_RS11360 PF00072 Response regulator receiver domain M001_RS11390 PF00672 HAMP domain M001_RS11390 PF01627 Hpt domain M001_RS11390 PF00512 His Kinase A (phospho-acceptor) domain M001_RS11390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS11390 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M001_RS11390 PF00072 Response regulator receiver domain M001_RS11395 PF03466 LysR substrate binding domain M001_RS11395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS11400 PF02129 X-Pro dipeptidyl-peptidase (S15 family) M001_RS11410 PF07690 Major Facilitator Superfamily M001_RS11435 PF02796 Helix-turn-helix domain of resolvase M001_RS11435 PF00239 Resolvase, N terminal domain M001_RS11450 PF04002 RadC-like JAB domain M001_RS11475 PF02384 N-6 DNA Methylase M001_RS11565 PF01925 Sulfite exporter TauE/SafE M001_RS11570 PF13520 Amino acid permease M001_RS11580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M001_RS11580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M001_RS11585 PF00378 Enoyl-CoA hydratase/isomerase M001_RS11590 PF00378 Enoyl-CoA hydratase/isomerase M001_RS11595 PF02770 Acyl-CoA dehydrogenase, middle domain M001_RS11595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M001_RS11595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M001_RS11600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M001_RS11600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M001_RS11600 PF02770 Acyl-CoA dehydrogenase, middle domain M001_RS11605 PF01039 Carboxyl transferase domain M001_RS11610 PF00378 Enoyl-CoA hydratase/isomerase M001_RS11615 PF02785 Biotin carboxylase C-terminal domain M001_RS11615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M001_RS11615 PF00364 Biotin-requiring enzyme M001_RS11615 PF00289 Biotin carboxylase, N-terminal domain M001_RS11620 PF00682 HMGL-like M001_RS11625 PF00376 MerR family regulatory protein M001_RS11625 PF09278 MerR, DNA binding M001_RS11640 PF01184 GPR1/FUN34/yaaH family M001_RS11645 PF12706 Beta-lactamase superfamily domain M001_RS11650 PF02885 Glycosyl transferase family, helical bundle domain M001_RS11650 PF00591 Glycosyl transferase family, a/b domain M001_RS11650 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M001_RS11655 PF01791 DeoC/LacD family aldolase M001_RS11665 PF12146 Serine aminopeptidase, S33 M001_RS11670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS11670 PF03466 LysR substrate binding domain M001_RS11675 PF12146 Serine aminopeptidase, S33 M001_RS11680 PF06167 Glucose-regulated metallo-peptidase M90 M001_RS11690 PF01235 Sodium:alanine symporter family M001_RS11725 PF00378 Enoyl-CoA hydratase/isomerase M001_RS11740 PF04341 Protein of unknown function, DUF485 M001_RS11745 PF00474 Sodium:solute symporter family M001_RS11750 PF12848 ABC transporter M001_RS11750 PF00005 ABC transporter M001_RS11755 PF13145 PPIC-type PPIASE domain M001_RS11760 PF00216 Bacterial DNA-binding protein M001_RS11765 PF00004 ATPase family associated with various cellular activities (AAA) M001_RS11765 PF05362 Lon protease (S16) C-terminal proteolytic domain M001_RS11765 PF02190 ATP-dependent protease La (LON) substrate-binding domain M001_RS11770 PF10431 C-terminal, D2-small domain, of ClpB protein M001_RS11770 PF07724 AAA domain (Cdc48 subfamily) M001_RS11770 PF06689 ClpX C4-type zinc finger M001_RS11775 PF00574 Clp protease M001_RS11780 PF05698 Bacterial trigger factor protein (TF) C-terminus M001_RS11780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M001_RS11780 PF05697 Bacterial trigger factor protein (TF) M001_RS11795 PF12704 MacB-like periplasmic core domain M001_RS11795 PF02687 FtsX-like permease family M001_RS11800 PF00005 ABC transporter M001_RS11805 PF12704 MacB-like periplasmic core domain M001_RS11805 PF02687 FtsX-like permease family M001_RS11815 PF17757 UvrB interaction domain M001_RS11815 PF03461 TRCF domain M001_RS11815 PF00271 Helicase conserved C-terminal domain M001_RS11815 PF00270 DEAD/DEAH box helicase M001_RS11815 PF02559 CarD-like/TRCF domain M001_RS11820 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M001_RS11825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M001_RS11830 PF00892 EamA-like transporter family M001_RS11840 PF00300 Histidine phosphatase superfamily (branch 1) M001_RS11845 PF00675 Insulinase (Peptidase family M16) M001_RS11845 PF05193 Peptidase M16 inactive domain M001_RS11845 PF16187 Middle or third domain of peptidase_M16 M001_RS11850 PF05724 Thiopurine S-methyltransferase (TPMT) M001_RS11865 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M001_RS11865 PF12833 Helix-turn-helix domain M001_RS11865 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M001_RS11865 PF02805 Metal binding domain of Ada M001_RS11890 PF00958 GMP synthase C terminal domain M001_RS11890 PF00117 Glutamine amidotransferase class-I M001_RS11890 PF02540 NAD synthase M001_RS11895 PF00478 IMP dehydrogenase / GMP reductase domain M001_RS11895 PF00571 CBS domain M001_RS11900 PF01292 Prokaryotic cytochrome b561 M001_RS11905 PF02601 Exonuclease VII, large subunit M001_RS11905 PF13742 OB-fold nucleic acid binding domain M001_RS11910 PF00392 Bacterial regulatory proteins, gntR family M001_RS11910 PF07702 UTRA domain M001_RS11915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M001_RS11915 PF02378 Phosphotransferase system, EIIC M001_RS11915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M001_RS11920 PF01074 Glycosyl hydrolases family 38 N-terminal domain M001_RS11920 PF07748 Glycosyl hydrolases family 38 C-terminal domain M001_RS11920 PF09261 Alpha mannosidase middle domain M001_RS11925 PF07478 D-ala D-ala ligase C-terminus M001_RS11925 PF01820 D-ala D-ala ligase N-terminus M001_RS11935 PF00255 Glutathione peroxidase M001_RS11940 PF00270 DEAD/DEAH box helicase M001_RS11940 PF00271 Helicase conserved C-terminal domain M001_RS11945 PF04055 Radical SAM superfamily M001_RS11950 PF00672 HAMP domain M001_RS11950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS11955 PF00793 DAHP synthetase I family M001_RS11960 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M001_RS11965 PF00266 Aminotransferase class-V M001_RS11970 PF00766 Electron transfer flavoprotein FAD-binding domain M001_RS11970 PF01012 Electron transfer flavoprotein domain M001_RS11975 PF01012 Electron transfer flavoprotein domain M001_RS11985 PF01544 CorA-like Mg2+ transporter protein M001_RS11990 PF11143 Protein of unknown function (DUF2919) M001_RS12000 PF07273 Protein of unknown function (DUF1439) M001_RS12010 PF00483 Nucleotidyl transferase M001_RS12015 PF00563 EAL domain M001_RS12015 PF00990 Diguanylate cyclase, GGDEF domain M001_RS12015 PF03707 Bacterial signalling protein N terminal repeat M001_RS12030 PF00294 pfkB family carbohydrate kinase M001_RS12040 PF00762 Ferrochelatase M001_RS12045 PF05191 Adenylate kinase, active site lid M001_RS12050 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M001_RS12055 PF00156 Phosphoribosyl transferase domain M001_RS12060 PF02674 Colicin V production protein M001_RS12070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M001_RS12070 PF02403 Seryl-tRNA synthetase N-terminal domain M001_RS12075 PF00004 ATPase family associated with various cellular activities (AAA) M001_RS12075 PF16193 AAA C-terminal domain M001_RS12075 PF12002 MgsA AAA+ ATPase C terminal M001_RS12080 PF03548 Outer membrane lipoprotein carrier protein LolA M001_RS12085 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M001_RS12085 PF17854 FtsK alpha domain M001_RS12085 PF09397 Ftsk gamma domain M001_RS12085 PF01580 FtsK/SpoIIIE family M001_RS12090 PF01037 Lrp/AsnC ligand binding domain M001_RS12095 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M001_RS12095 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M001_RS12100 PF07992 Pyridine nucleotide-disulphide oxidoreductase M001_RS12105 PF17158 Membrane-associated sensor, integral membrane domain M001_RS12105 PF00990 Diguanylate cyclase, GGDEF domain M001_RS12110 PF05433 Glycine zipper 2TM domain M001_RS12115 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M001_RS12120 PF04376 Arginine-tRNA-protein transferase, N terminus M001_RS12120 PF04377 Arginine-tRNA-protein transferase, C terminus M001_RS12125 PF01176 Translation initiation factor 1A / IF-1 M001_RS12130 PF00004 ATPase family associated with various cellular activities (AAA) M001_RS12130 PF07724 AAA domain (Cdc48 subfamily) M001_RS12130 PF17871 AAA lid domain M001_RS12130 PF10431 C-terminal, D2-small domain, of ClpB protein M001_RS12130 PF02861 Clp amino terminal domain, pathogenicity island component M001_RS12135 PF02617 ATP-dependent Clp protease adaptor protein ClpS M001_RS12140 PF00313 'Cold-shock' DNA-binding domain M001_RS12145 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M001_RS12145 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M001_RS12165 PF00486 Transcriptional regulatory protein, C terminal M001_RS12165 PF00072 Response regulator receiver domain M001_RS12170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS12170 PF00672 HAMP domain M001_RS12170 PF00512 His Kinase A (phospho-acceptor) domain M001_RS12180 PF09924 Uncharacterised conserved protein (DUF2156) M001_RS12180 PF03706 Lysylphosphatidylglycerol synthase TM region M001_RS12220 PF02954 Bacterial regulatory protein, Fis family M001_RS12220 PF00158 Sigma-54 interaction domain M001_RS12220 PF02830 V4R domain M001_RS12220 PF06505 Activator of aromatic catabolism M001_RS12225 PF10431 C-terminal, D2-small domain, of ClpB protein M001_RS12225 PF17871 AAA lid domain M001_RS12225 PF07724 AAA domain (Cdc48 subfamily) M001_RS12225 PF00004 ATPase family associated with various cellular activities (AAA) M001_RS12275 PF13356 Arm DNA-binding domain M001_RS12275 PF00589 Phage integrase family M001_RS12290 PF12833 Helix-turn-helix domain M001_RS12295 PF13592 Winged helix-turn helix M001_RS12295 PF13358 DDE superfamily endonuclease M001_RS12310 PF13737 Transposase DDE domain M001_RS12345 PF00689 Cation transporting ATPase, C-terminus M001_RS12345 PF00690 Cation transporter/ATPase, N-terminus M001_RS12355 PF03466 LysR substrate binding domain M001_RS12355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS12360 PF01810 LysE type translocator M001_RS12370 PF11922 Domain of unknown function (DUF3440) M001_RS12370 PF01507 Phosphoadenosine phosphosulfate reductase family M001_RS12375 PF02195 ParB-like nuclease domain M001_RS12395 PF00563 EAL domain M001_RS12395 PF12792 CSS motif domain associated with EAL M001_RS12405 PF05598 Transposase domain (DUF772) M001_RS12405 PF01609 Transposase DDE domain M001_RS12410 PF09264 Vibrio cholerae sialidase, lectin insertion M001_RS12410 PF13088 BNR repeat-like domain M001_RS12415 PF04074 YhcH/YjgK/YiaL M001_RS12420 PF00474 Sodium:solute symporter family M001_RS12425 PF00480 ROK family M001_RS12430 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase M001_RS12435 PF01418 Helix-turn-helix domain, rpiR family M001_RS12435 PF01380 SIS domain M001_RS12440 PF00701 Dihydrodipicolinate synthetase family M001_RS12470 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M001_RS12470 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M001_RS12470 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M001_RS12475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M001_RS12480 PF00535 Glycosyl transferase family 2 M001_RS12485 PF00551 Formyl transferase M001_RS12485 PF02911 Formyl transferase, C-terminal domain M001_RS12485 PF01370 NAD dependent epimerase/dehydratase family M001_RS12490 PF01522 Polysaccharide deacetylase M001_RS12495 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase M001_RS12500 PF00892 EamA-like transporter family M001_RS12505 PF00893 Small Multidrug Resistance protein M001_RS12515 PF00816 H-NS histone family M001_RS12525 PF13148 Protein of unknown function (DUF3987) M001_RS12540 PF02796 Helix-turn-helix domain of resolvase M001_RS12540 PF00239 Resolvase, N terminal domain M001_RS12570 PF04002 RadC-like JAB domain M001_RS12625 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A M001_RS12630 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase M001_RS12635 PF02378 Phosphotransferase system, EIIC M001_RS12635 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M001_RS12635 PF00367 phosphotransferase system, EIIB M001_RS12640 PF01380 SIS domain M001_RS12640 PF01418 Helix-turn-helix domain, rpiR family M001_RS12650 PF00916 Sulfate permease family M001_RS12650 PF01740 STAS domain M001_RS12675 PF00270 DEAD/DEAH box helicase M001_RS12675 PF00271 Helicase conserved C-terminal domain M001_RS12680 PF03350 Uncharacterized protein family, UPF0114 M001_RS12695 PF03239 Iron permease FTR1 family M001_RS12700 PF01593 Flavin containing amine oxidoreductase M001_RS12715 PF07690 Major Facilitator Superfamily M001_RS12720 PF03600 Citrate transporter M001_RS12730 PF00005 ABC transporter M001_RS12755 PF00561 alpha/beta hydrolase fold M001_RS12775 PF01625 Peptide methionine sulfoxide reductase M001_RS12780 PF00583 Acetyltransferase (GNAT) family M001_RS12780 PF00696 Amino acid kinase family M001_RS12785 PF00696 Amino acid kinase family M001_RS12785 PF01842 ACT domain M001_RS12795 PF00884 Sulfatase M001_RS12800 PF17676 LD-carboxypeptidase C-terminal domain M001_RS12800 PF02016 LD-carboxypeptidase N-terminal domain M001_RS12805 PF01734 Patatin-like phospholipase M001_RS12810 PF17179 4Fe-4S dicluster domain M001_RS12815 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B M001_RS12815 PF00175 Oxidoreductase NAD-binding domain M001_RS12820 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M001_RS12820 PF13187 4Fe-4S dicluster domain M001_RS12820 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M001_RS12825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M001_RS12825 PF10414 Sirohaem synthase dimerisation region M001_RS12825 PF14824 Sirohaem biosynthesis protein central M001_RS12835 PF01906 Putative heavy-metal-binding M001_RS12840 PF05036 Sporulation related domain M001_RS12845 PF02875 Mur ligase family, glutamate ligase domain M001_RS12845 PF08245 Mur ligase middle domain M001_RS12850 PF01039 Carboxyl transferase domain M001_RS12850 PF17848 Acetyl-coA carboxylase zinc finger domain M001_RS12855 PF01416 tRNA pseudouridine synthase M001_RS12865 PF01118 Semialdehyde dehydrogenase, NAD binding domain M001_RS12865 PF02774 Semialdehyde dehydrogenase, dimerisation domain M001_RS12870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M001_RS12870 PF11890 Domain of unknown function (DUF3410) M001_RS12870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M001_RS12875 PF01569 PAP2 superfamily M001_RS12880 PF00929 Exonuclease M001_RS12885 PF13726 Na+-H+ antiporter family M001_RS12885 PF03553 Na+/H+ antiporter family M001_RS12890 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M001_RS12890 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M001_RS12890 PF02769 AIR synthase related protein, C-terminal domain M001_RS12895 PF01464 Transglycosylase SLT domain M001_RS12895 PF00497 Bacterial extracellular solute-binding proteins, family 3 M001_RS12900 PF07191 zinc-ribbons M001_RS12905 PF01926 50S ribosome-binding GTPase M001_RS12905 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M001_RS12910 PF13360 PQQ-like domain M001_RS12915 PF09976 Tetratricopeptide repeat-like domain M001_RS12920 PF03129 Anticodon binding domain M001_RS12920 PF13393 Histidyl-tRNA synthetase M001_RS12930 PF13464 Domain of unknown function (DUF4115) M001_RS12940 PF04055 Radical SAM superfamily M001_RS12945 PF00334 Nucleoside diphosphate kinase M001_RS12950 PF12404 Peptidase M001_RS12950 PF00883 Cytosol aminopeptidase family, catalytic domain M001_RS12955 PF00883 Cytosol aminopeptidase family, catalytic domain M001_RS12955 PF12404 Peptidase M001_RS12960 PF00111 2Fe-2S iron-sulfur cluster binding domain M001_RS12965 PF00012 Hsp70 protein M001_RS12970 PF07743 HSCB C-terminal oligomerisation domain M001_RS12970 PF00226 DnaJ domain M001_RS12975 PF01521 Iron-sulphur cluster biosynthesis M001_RS12980 PF01592 NifU-like N terminal domain M001_RS12985 PF00266 Aminotransferase class-V M001_RS12990 PF02082 Transcriptional regulator M001_RS12995 PF00588 SpoU rRNA Methylase family M001_RS13005 PF02036 SCP-2 sterol transfer family M001_RS13010 PF01136 Peptidase family U32 M001_RS13015 PF01136 Peptidase family U32 M001_RS13020 PF07719 Tetratricopeptide repeat M001_RS13020 PF13181 Tetratricopeptide repeat M001_RS13030 PF02355 Protein export membrane protein M001_RS13030 PF07549 SecD/SecF GG Motif M001_RS13035 PF13721 SecD export protein N-terminal TM region M001_RS13035 PF07549 SecD/SecF GG Motif M001_RS13035 PF02355 Protein export membrane protein M001_RS13040 PF02699 Preprotein translocase subunit M001_RS13045 PF01702 Queuine tRNA-ribosyltransferase M001_RS13050 PF02547 Queuosine biosynthesis protein M001_RS13055 PF00571 CBS domain M001_RS13060 PF00578 AhpC/TSA family M001_RS13060 PF10417 C-terminal domain of 1-Cys peroxiredoxin M001_RS13065 PF13192 Thioredoxin domain M001_RS13065 PF07992 Pyridine nucleotide-disulphide oxidoreductase M001_RS13115 PF00664 ABC transporter transmembrane region M001_RS13115 PF00005 ABC transporter M001_RS13115 PF03412 Peptidase C39 family M001_RS13120 PF16199 Radical_SAM C-terminal domain M001_RS13120 PF04055 Radical SAM superfamily M001_RS13125 PF01493 GXGXG motif M001_RS13125 PF04898 Glutamate synthase central domain M001_RS13125 PF01645 Conserved region in glutamate synthase M001_RS13125 PF00310 Glutamine amidotransferases class-II M001_RS13130 PF07992 Pyridine nucleotide-disulphide oxidoreductase M001_RS13130 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M001_RS13140 PF00270 DEAD/DEAH box helicase M001_RS13140 PF00271 Helicase conserved C-terminal domain M001_RS13155 PF02421 Ferrous iron transport protein B M001_RS13155 PF07664 Ferrous iron transport protein B C terminus M001_RS13155 PF07670 Nucleoside recognition M001_RS13165 PF01253 Translation initiation factor SUI1 M001_RS13170 PF01169 Uncharacterized protein family UPF0016 M001_RS13210 PF09190 DALR domain M001_RS13210 PF01406 tRNA synthetases class I (C) catalytic domain M001_RS13215 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M001_RS13225 PF00149 Calcineurin-like phosphoesterase M001_RS13235 PF04226 Transglycosylase associated protein M001_RS13240 PF00512 His Kinase A (phospho-acceptor) domain M001_RS13240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS13240 PF08521 Two-component sensor kinase N-terminal M001_RS13245 PF00072 Response regulator receiver domain M001_RS13245 PF00486 Transcriptional regulatory protein, C terminal M001_RS13260 PF01970 Tripartite tricarboxylate transporter TctA family M001_RS13270 PF02899 Phage integrase, N-terminal SAM-like domain M001_RS13270 PF00589 Phage integrase family M001_RS13285 PF00717 Peptidase S24-like M001_RS13285 PF01381 Helix-turn-helix M001_RS13300 PF06892 Phage regulatory protein CII (CP76) M001_RS13340 PF01926 50S ribosome-binding GTPase M001_RS13345 PF11798 IMS family HHH motif M001_RS13345 PF13438 Domain of unknown function (DUF4113) M001_RS13345 PF11799 impB/mucB/samB family C-terminal domain M001_RS13345 PF00817 impB/mucB/samB family M001_RS13350 PF00717 Peptidase S24-like M001_RS13420 PF01258 Prokaryotic dksA/traR C4-type zinc finger M001_RS13530 PF01066 CDP-alcohol phosphatidyltransferase M001_RS13535 PF01541 GIY-YIG catalytic domain M001_RS13535 PF08459 UvrC Helix-hairpin-helix N-terminal M001_RS13535 PF02151 UvrB/uvrC motif M001_RS13540 PF00196 Bacterial regulatory proteins, luxR family M001_RS13540 PF00072 Response regulator receiver domain M001_RS13545 PF02348 Cytidylyltransferase M001_RS13550 PF03966 Trm112p-like protein M001_RS13555 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M001_RS13560 PF00664 ABC transporter transmembrane region M001_RS13560 PF00005 ABC transporter M001_RS13565 PF00753 Metallo-beta-lactamase superfamily M001_RS13565 PF03772 Competence protein M001_RS13580 PF00155 Aminotransferase class I and II M001_RS13590 PF03466 LysR substrate binding domain M001_RS13590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS13595 PF04219 Protein of unknown function, DUF M001_RS13600 PF03974 Ecotin M001_RS13605 PF03009 Glycerophosphoryl diester phosphodiesterase family M001_RS13610 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M001_RS13610 PF01266 FAD dependent oxidoreductase M001_RS13615 PF00455 DeoR C terminal sensor domain M001_RS13615 PF08220 DeoR-like helix-turn-helix domain M001_RS13620 PF07690 Major Facilitator Superfamily M001_RS13625 PF00230 Major intrinsic protein M001_RS13630 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M001_RS13630 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M001_RS13635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS13635 PF00672 HAMP domain M001_RS13635 PF02743 Cache domain M001_RS13645 PF03466 LysR substrate binding domain M001_RS13645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS13660 PF13006 Insertion element 4 transposase N-terminal M001_RS13660 PF01609 Transposase DDE domain M001_RS13670 PF00248 Aldo/keto reductase family M001_RS13680 PF07690 Major Facilitator Superfamily M001_RS13685 PF02525 Flavodoxin-like fold M001_RS13700 PF05114 Protein of unknown function (DUF692) M001_RS13720 PF02322 Cytochrome bd terminal oxidase subunit II M001_RS13725 PF01654 Cytochrome bd terminal oxidase subunit I M001_RS13730 PF00155 Aminotransferase class I and II M001_RS13730 PF00392 Bacterial regulatory proteins, gntR family M001_RS13740 PF04391 Protein of unknown function (DUF533) M001_RS13745 PF03061 Thioesterase superfamily M001_RS13750 PF10689 Protein of unknown function (DUF2496) M001_RS13755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS13755 PF03466 LysR substrate binding domain M001_RS13760 PF07690 Major Facilitator Superfamily M001_RS13765 PF00849 RNA pseudouridylate synthase M001_RS13765 PF01479 S4 domain M001_RS13775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M001_RS13790 PF00145 C-5 cytosine-specific DNA methylase M001_RS13790 PF18284 DNA methylase N-terminal domain M001_RS13795 PF09019 EcoRII C terminal M001_RS13795 PF09217 Restriction endonuclease EcoRII, N-terminal M001_RS13800 PF02508 Rnf-Nqr subunit, membrane protein M001_RS13805 PF04060 Putative Fe-S cluster M001_RS13810 PF10531 SLBB domain M001_RS13810 PF13375 RnfC Barrel sandwich hybrid domain M001_RS13810 PF12838 4Fe-4S dicluster domain M001_RS13810 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M001_RS13815 PF03116 NQR2, RnfD, RnfE family M001_RS13820 PF04205 FMN-binding domain M001_RS13825 PF02508 Rnf-Nqr subunit, membrane protein M001_RS13830 PF10576 Iron-sulfur binding domain of endonuclease III M001_RS13830 PF00633 Helix-hairpin-helix motif M001_RS13830 PF00730 HhH-GPD superfamily base excision DNA repair protein M001_RS13835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M001_RS13840 PF00691 OmpA family M001_RS13840 PF18393 MotY N-terminal domain M001_RS13875 PF07759 Protein of unknown function (DUF1615) M001_RS13880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M001_RS13880 PF02142 MGS-like domain M001_RS13880 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M001_RS13885 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M001_RS13885 PF00117 Glutamine amidotransferase class-I M001_RS13890 PF05173 Dihydrodipicolinate reductase, C-terminus M001_RS13890 PF01113 Dihydrodipicolinate reductase, N-terminus M001_RS13905 PF01812 5-formyltetrahydrofolate cyclo-ligase family M001_RS13910 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M001_RS13915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M001_RS13915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M001_RS13915 PF01842 ACT domain M001_RS13920 PF01219 Prokaryotic diacylglycerol kinase M001_RS13925 PF00793 DAHP synthetase I family M001_RS13930 PF00583 Acetyltransferase (GNAT) family M001_RS13935 PF00005 ABC transporter M001_RS13940 PF01032 FecCD transport family M001_RS13955 PF00437 Type II/IV secretion system protein M001_RS13965 PF01168 Alanine racemase, N-terminal domain M001_RS13965 PF00842 Alanine racemase, C-terminal domain M001_RS13970 PF03741 Integral membrane protein TerC family M001_RS13975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M001_RS13975 PF00005 ABC transporter M001_RS13980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M001_RS13980 PF00005 ABC transporter M001_RS13985 PF12911 N-terminal TM domain of oligopeptide transport permease C M001_RS13985 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS13990 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS13995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M001_RS14000 PF01914 MarC family integral membrane protein M001_RS14005 PF00171 Aldehyde dehydrogenase family M001_RS14005 PF00465 Iron-containing alcohol dehydrogenase M001_RS14015 PF01709 Transcriptional regulator M001_RS14020 PF01336 OB-fold nucleic acid binding domain M001_RS14020 PF00152 tRNA synthetases class II (D, K and N) M001_RS14020 PF02938 GAD domain M001_RS14030 PF01904 Protein of unknown function DUF72 M001_RS14035 PF13649 Methyltransferase domain M001_RS14040 PF08003 Protein of unknown function (DUF1698) M001_RS14060 PF10417 C-terminal domain of 1-Cys peroxiredoxin M001_RS14060 PF00578 AhpC/TSA family M001_RS14065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS14065 PF03466 LysR substrate binding domain M001_RS14070 PF00877 NlpC/P60 family M001_RS14080 PF03466 LysR substrate binding domain M001_RS14080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS14085 PF02447 GntP family permease M001_RS14090 PF00291 Pyridoxal-phosphate dependent enzyme M001_RS14100 PF00180 Isocitrate/isopropylmalate dehydrogenase M001_RS14105 PF12833 Helix-turn-helix domain M001_RS14110 PF01238 Phosphomannose isomerase type I M001_RS14115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS14115 PF00672 HAMP domain M001_RS14125 PF13006 Insertion element 4 transposase N-terminal M001_RS14125 PF01609 Transposase DDE domain M001_RS14140 PF05656 Protein of unknown function (DUF805) M001_RS14150 PF00034 Cytochrome c M001_RS14150 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M001_RS14160 PF01156 Inosine-uridine preferring nucleoside hydrolase M001_RS14170 PF00171 Aldehyde dehydrogenase family M001_RS14175 PF00440 Bacterial regulatory proteins, tetR family M001_RS14175 PF08359 YsiA-like protein, C-terminal region M001_RS14185 PF00465 Iron-containing alcohol dehydrogenase M001_RS14205 PF01554 MatE M001_RS14215 PF04325 Protein of unknown function (DUF465) M001_RS14225 PF13188 PAS domain M001_RS14225 PF03707 Bacterial signalling protein N terminal repeat M001_RS14225 PF00990 Diguanylate cyclase, GGDEF domain M001_RS14225 PF00563 EAL domain M001_RS14230 PF04337 Protein of unknown function, DUF480 M001_RS14240 PF00127 Copper binding proteins, plastocyanin/azurin family M001_RS14245 PF02424 ApbE family M001_RS14260 PF03372 Endonuclease/Exonuclease/phosphatase family M001_RS14265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M001_RS14270 PF00873 AcrB/AcrD/AcrF family M001_RS14295 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M001_RS14305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M001_RS14305 PF00529 HlyD membrane-fusion protein of T1SS M001_RS14310 PF00873 AcrB/AcrD/AcrF family M001_RS14325 PF00005 ABC transporter M001_RS14330 PF01032 FecCD transport family M001_RS14335 PF01032 FecCD transport family M001_RS14340 PF08021 Siderophore-interacting FAD-binding domain M001_RS14340 PF04954 Siderophore-interacting protein M001_RS14345 PF11849 Domain of unknown function (DUF3369) M001_RS14355 PF00929 Exonuclease M001_RS14360 PF00075 RNase H M001_RS14365 PF08241 Methyltransferase domain M001_RS14370 PF16123 Hydroxyacylglutathione hydrolase C-terminus M001_RS14370 PF00753 Metallo-beta-lactamase superfamily M001_RS14375 PF01476 LysM domain M001_RS14375 PF01464 Transglycosylase SLT domain M001_RS14380 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M001_RS14390 PF05472 DNA replication terminus site-binding protein (Ter protein) M001_RS14395 PF04434 SWIM zinc finger M001_RS14395 PF00176 SNF2 family N-terminal domain M001_RS14395 PF00271 Helicase conserved C-terminal domain M001_RS14400 PF00512 His Kinase A (phospho-acceptor) domain M001_RS14400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS14400 PF00672 HAMP domain M001_RS14405 PF00072 Response regulator receiver domain M001_RS14405 PF00486 Transcriptional regulatory protein, C terminal M001_RS14410 PF00529 HlyD membrane-fusion protein of T1SS M001_RS14410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M001_RS14415 PF00873 AcrB/AcrD/AcrF family M001_RS14485 PF03527 RHS protein M001_RS14485 PF05593 RHS Repeat M001_RS14520 PF04717 Type VI secretion system, phage-baseplate injector M001_RS14525 PF05638 Type VI secretion system effector, Hcp M001_RS14540 PF17969 L,D-transpeptidase C-terminal domain M001_RS14540 PF01476 LysM domain M001_RS14540 PF03734 L,D-transpeptidase catalytic domain M001_RS14550 PF00939 Sodium:sulfate symporter transmembrane region M001_RS14555 PF01575 MaoC like domain M001_RS14560 PF05971 RNA methyltransferase M001_RS14565 PF00877 NlpC/P60 family M001_RS14570 PF01648 4'-phosphopantetheinyl transferase superfamily M001_RS14575 PF00085 Thioredoxin M001_RS14585 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M001_RS14590 PF01842 ACT domain M001_RS14590 PF00551 Formyl transferase M001_RS14600 PF13091 PLD-like domain M001_RS14600 PF13396 Phospholipase_D-nuclease N-terminal M001_RS14615 PF13006 Insertion element 4 transposase N-terminal M001_RS14615 PF01609 Transposase DDE domain M001_RS14620 PF01464 Transglycosylase SLT domain M001_RS14620 PF01551 Peptidase family M23 M001_RS14620 PF10145 Phage-related minor tail protein M001_RS14625 PF00230 Major intrinsic protein M001_RS14635 PF00155 Aminotransferase class I and II M001_RS14640 PF03606 C4-dicarboxylate anaerobic carrier M001_RS14645 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase M001_RS14645 PF07055 Enoyl reductase FAD binding domain M001_RS14645 PF12241 Trans-2-enoyl-CoA reductase catalytic region M001_RS14650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS14650 PF12729 Four helix bundle sensory module for signal transduction M001_RS14650 PF00672 HAMP domain M001_RS14655 PF00300 Histidine phosphatase superfamily (branch 1) M001_RS14660 PF13309 HTH domain M001_RS14660 PF08348 YheO-like PAS domain M001_RS14665 PF03313 Serine dehydratase alpha chain M001_RS14670 PF01042 Endoribonuclease L-PSP M001_RS14680 PF00672 HAMP domain M001_RS14680 PF12729 Four helix bundle sensory module for signal transduction M001_RS14680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS14695 PF17810 Arginine decarboxylase helical bundle domain M001_RS14695 PF17944 Arginine decarboxylase C-terminal helical extension M001_RS14695 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M001_RS14700 PF07687 Peptidase dimerisation domain M001_RS14700 PF01546 Peptidase family M20/M25/M40 M001_RS14715 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M001_RS14715 PF05221 S-adenosyl-L-homocysteine hydrolase M001_RS14725 PF04264 YceI-like domain M001_RS14730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS14730 PF03466 LysR substrate binding domain M001_RS14740 PF01268 Formate--tetrahydrofolate ligase M001_RS14745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS14745 PF00672 HAMP domain M001_RS14745 PF17200 Single Cache domain 2 M001_RS14750 PF00672 HAMP domain M001_RS14750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS14755 PF01227 GTP cyclohydrolase I M001_RS14760 PF03453 MoeA N-terminal region (domain I and II) M001_RS14760 PF00994 Probable molybdopterin binding domain M001_RS14760 PF03454 MoeA C-terminal region (domain IV) M001_RS14765 PF00899 ThiF family M001_RS14775 PF06406 StbA protein M001_RS14780 PF12697 Alpha/beta hydrolase family M001_RS14785 PF00005 ABC transporter M001_RS14785 PF03459 TOBE domain M001_RS14790 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS14800 PF02391 MoaE protein M001_RS14805 PF02597 ThiS family M001_RS14810 PF01967 MoaC family M001_RS14815 PF00994 Probable molybdopterin binding domain M001_RS14820 PF03264 NapC/NirT cytochrome c family, N-terminal region M001_RS14825 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) M001_RS14830 PF12837 4Fe-4S binding domain M001_RS14830 PF12801 4Fe-4S binding domain M001_RS14835 PF12800 4Fe-4S binding domain M001_RS14835 PF12838 4Fe-4S dicluster domain M001_RS14840 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M001_RS14840 PF00384 Molybdopterin oxidoreductase M001_RS14840 PF01568 Molydopterin dinucleotide binding domain M001_RS14840 PF10518 TAT (twin-arginine translocation) pathway signal sequence M001_RS14850 PF13187 4Fe-4S dicluster domain M001_RS14850 PF12838 4Fe-4S dicluster domain M001_RS14855 PF06463 Molybdenum Cofactor Synthesis C M001_RS14855 PF04055 Radical SAM superfamily M001_RS14860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS14860 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M001_RS14860 PF07730 Histidine kinase M001_RS14860 PF00672 HAMP domain M001_RS14865 PF00072 Response regulator receiver domain M001_RS14865 PF00196 Bacterial regulatory proteins, luxR family M001_RS14875 PF00072 Response regulator receiver domain M001_RS14875 PF00512 His Kinase A (phospho-acceptor) domain M001_RS14875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS14875 PF09456 RcsC Alpha-Beta-Loop (ABL) M001_RS14885 PF01933 Uncharacterised protein family UPF0052 M001_RS14895 PF01609 Transposase DDE domain M001_RS14895 PF13006 Insertion element 4 transposase N-terminal M001_RS14900 PF13230 Glutamine amidotransferases class-II M001_RS14905 PF13580 SIS domain M001_RS14910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M001_RS14910 PF02770 Acyl-CoA dehydrogenase, middle domain M001_RS14910 PF09317 Domain of unknown function (DUF1974) M001_RS14910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M001_RS14915 PF01546 Peptidase family M20/M25/M40 M001_RS14915 PF07687 Peptidase dimerisation domain M001_RS14920 PF01609 Transposase DDE domain M001_RS14920 PF13006 Insertion element 4 transposase N-terminal M001_RS14930 PF03364 Polyketide cyclase / dehydrase and lipid transport M001_RS14935 PF01668 SmpB protein M001_RS14945 PF00512 His Kinase A (phospho-acceptor) domain M001_RS14945 PF09456 RcsC Alpha-Beta-Loop (ABL) M001_RS14945 PF00072 Response regulator receiver domain M001_RS14945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS14950 PF00563 EAL domain M001_RS14950 PF03707 Bacterial signalling protein N terminal repeat M001_RS14950 PF00990 Diguanylate cyclase, GGDEF domain M001_RS14955 PF12838 4Fe-4S dicluster domain M001_RS14955 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M001_RS14955 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M001_RS14955 PF01568 Molydopterin dinucleotide binding domain M001_RS14955 PF00384 Molybdopterin oxidoreductase M001_RS14970 PF13181 Tetratricopeptide repeat M001_RS14970 PF17128 Domain of unknown function (DUF5107) M001_RS14975 PF00480 ROK family M001_RS14990 PF00440 Bacterial regulatory proteins, tetR family M001_RS14995 PF09317 Domain of unknown function (DUF1974) M001_RS14995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M001_RS14995 PF02770 Acyl-CoA dehydrogenase, middle domain M001_RS14995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M001_RS15000 PF00873 AcrB/AcrD/AcrF family M001_RS15010 PF02075 Crossover junction endodeoxyribonuclease RuvC M001_RS15015 PF02108 Flagellar assembly protein FliH M001_RS15020 PF06578 YOP proteins translocation protein K (YscK) M001_RS15025 PF01514 Secretory protein of YscJ/FliF family M001_RS15030 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI M001_RS15035 PF09025 YopR, type III needle-polymerisation regulator M001_RS15040 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) M001_RS15045 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF M001_RS15055 PF16693 Inner membrane component of T3SS, periplasmic domain M001_RS15055 PF16697 Inner membrane component of T3SS, cytoplasmic domain M001_RS15060 PF00263 Bacterial type II and III secretion system protein M001_RS15060 PF03958 Bacterial type II/III secretion system short domain M001_RS15065 PF05932 Tir chaperone protein (CesT) family M001_RS15075 PF12833 Helix-turn-helix domain M001_RS15080 PF09619 Type III secretion system lipoprotein chaperone (YscW) M001_RS15090 PF05932 Tir chaperone protein (CesT) family M001_RS15095 PF05844 YopD protein M001_RS15100 PF04888 Secretion system effector C (SseC) like family M001_RS15105 PF07720 Tetratricopeptide repeat M001_RS15110 PF04792 V antigen (LcrV) protein M001_RS15115 PF07216 LcrG protein M001_RS15120 PF09621 Type III secretion system regulator (LcrR) M001_RS15125 PF00771 FHIPEP family M001_RS15135 PF09474 Type III secretion system YscX (type_III_YscX) M001_RS15145 PF09059 TyeA M001_RS15150 PF07201 HrpJ-like domain M001_RS15155 PF18269 T3SS EscN ATPase C-terminal domain M001_RS15155 PF02874 ATP synthase alpha/beta family, beta-barrel domain M001_RS15155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M001_RS15165 PF02120 Flagellar hook-length control protein FliK M001_RS15170 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M001_RS15175 PF00813 FliP family M001_RS15180 PF01313 Bacterial export proteins, family 3 M001_RS15185 PF01311 Bacterial export proteins, family 1 M001_RS15190 PF01312 FlhB HrpN YscU SpaS Family M001_RS15195 PF03496 ADP-ribosyltransferase exoenzyme M001_RS15205 PF00155 Aminotransferase class I and II M001_RS15210 PF00367 phosphotransferase system, EIIB M001_RS15210 PF02378 Phosphotransferase system, EIIC M001_RS15215 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M001_RS15215 PF00356 Bacterial regulatory proteins, lacI family M001_RS15225 PF00583 Acetyltransferase (GNAT) family M001_RS15250 PF00210 Ferritin-like domain M001_RS15275 PF02378 Phosphotransferase system, EIIC M001_RS15275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M001_RS15275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M001_RS15280 PF07690 Major Facilitator Superfamily M001_RS15285 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M001_RS15295 PF00849 RNA pseudouridylate synthase M001_RS15300 PF00293 NUDIX domain M001_RS15310 PF04356 Protein of unknown function (DUF489) M001_RS15315 PF00206 Lyase M001_RS15315 PF08328 Adenylosuccinate lyase C-terminal M001_RS15320 PF08007 Cupin superfamily protein M001_RS15325 PF13006 Insertion element 4 transposase N-terminal M001_RS15325 PF01609 Transposase DDE domain M001_RS15345 PF13417 Glutathione S-transferase, N-terminal domain M001_RS15350 PF01243 Pyridoxamine 5'-phosphate oxidase M001_RS15350 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M001_RS15385 PF01189 16S rRNA methyltransferase RsmB/F M001_RS15385 PF01029 NusB family M001_RS15390 PF01042 Endoribonuclease L-PSP M001_RS15395 PF01228 Glycine radical M001_RS15395 PF02901 Pyruvate formate lyase-like M001_RS15400 PF00871 Acetokinase family M001_RS15405 PF03222 Tryptophan/tyrosine permease family M001_RS15410 PF00291 Pyridoxal-phosphate dependent enzyme M001_RS15415 PF00462 Glutaredoxin M001_RS15420 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M001_RS15420 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M001_RS15425 PF04333 MlaA lipoprotein M001_RS15435 PF03918 Cytochrome C biogenesis protein M001_RS15440 PF08534 Redoxin M001_RS15445 PF01578 Cytochrome C assembly protein M001_RS15445 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M001_RS15450 PF03100 CcmE M001_RS15455 PF04995 Heme exporter protein D (CcmD) M001_RS15460 PF01578 Cytochrome C assembly protein M001_RS15465 PF03379 CcmB protein M001_RS15470 PF00005 ABC transporter M001_RS15480 PF01584 CheW-like domain M001_RS15490 PF13614 AAA domain M001_RS15495 PF00691 OmpA family M001_RS15495 PF13677 Membrane MotB of proton-channel complex MotA/MotB M001_RS15500 PF01618 MotA/TolQ/ExbB proton channel family M001_RS15505 PF00072 Response regulator receiver domain M001_RS15505 PF01339 CheB methylesterase M001_RS15510 PF00072 Response regulator receiver domain M001_RS15510 PF01627 Hpt domain M001_RS15510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS15510 PF02895 Signal transducing histidine kinase, homodimeric domain M001_RS15510 PF01584 CheW-like domain M001_RS15515 PF04344 Chemotaxis phosphatase, CheZ M001_RS15520 PF00072 Response regulator receiver domain M001_RS15525 PF04545 Sigma-70, region 4 M001_RS15525 PF04542 Sigma-70 region 2 M001_RS15525 PF04539 Sigma-70 region 3 M001_RS15530 PF10609 NUBPL iron-transfer P-loop NTPase M001_RS15535 PF00448 SRP54-type protein, GTPase domain M001_RS15540 PF00771 FHIPEP family M001_RS15545 PF01312 FlhB HrpN YscU SpaS Family M001_RS15550 PF01311 Bacterial export proteins, family 1 M001_RS15555 PF01313 Bacterial export proteins, family 3 M001_RS15560 PF00813 FliP family M001_RS15565 PF04347 Flagellar biosynthesis protein, FliO M001_RS15570 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M001_RS15575 PF02154 Flagellar motor switch protein FliM M001_RS15575 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M001_RS15595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M001_RS15595 PF18269 T3SS EscN ATPase C-terminal domain M001_RS15605 PF14842 FliG N-terminal domain M001_RS15605 PF14841 FliG middle domain M001_RS15605 PF01706 FliG C-terminal domain M001_RS15610 PF08345 Flagellar M-ring protein C-terminal M001_RS15610 PF01514 Secretory protein of YscJ/FliF family M001_RS15615 PF02049 Flagellar hook-basal body complex protein FliE M001_RS15625 PF07969 Amidohydrolase family M001_RS15635 PF02887 Pyruvate kinase, alpha/beta domain M001_RS15635 PF00224 Pyruvate kinase, barrel domain M001_RS15640 PF01380 SIS domain M001_RS15640 PF01418 Helix-turn-helix domain, rpiR family M001_RS15645 PF02685 Glucokinase M001_RS15670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS15670 PF00672 HAMP domain M001_RS15675 PF00497 Bacterial extracellular solute-binding proteins, family 3 M001_RS15680 PF00860 Permease family M001_RS15690 PF05433 Glycine zipper 2TM domain M001_RS15690 PF16998 17 kDa outer membrane surface antigen M001_RS15695 PF00390 Malic enzyme, N-terminal domain M001_RS15695 PF03949 Malic enzyme, NAD binding domain M001_RS15715 PF13247 4Fe-4S dicluster domain M001_RS15720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M001_RS15720 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M001_RS15720 PF01568 Molydopterin dinucleotide binding domain M001_RS15720 PF12838 4Fe-4S dicluster domain M001_RS15720 PF00384 Molybdopterin oxidoreductase M001_RS15720 PF01568 Molydopterin dinucleotide binding domain M001_RS15720 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M001_RS15720 PF00384 Molybdopterin oxidoreductase M001_RS15720 PF12838 4Fe-4S dicluster domain M001_RS15720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M001_RS15755 PF02634 FdhD/NarQ family M001_RS15765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS15765 PF00512 His Kinase A (phospho-acceptor) domain M001_RS15765 PF00989 PAS fold M001_RS15770 PF02954 Bacterial regulatory protein, Fis family M001_RS15770 PF00158 Sigma-54 interaction domain M001_RS15770 PF00072 Response regulator receiver domain M001_RS15775 PF12849 PBP superfamily domain M001_RS15780 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS15785 PF00005 ABC transporter M001_RS15790 PF12804 MobA-like NTP transferase domain M001_RS15795 PF00994 Probable molybdopterin binding domain M001_RS15795 PF03454 MoeA C-terminal region (domain IV) M001_RS15795 PF03453 MoeA N-terminal region (domain I and II) M001_RS15800 PF04632 Fusaric acid resistance protein family M001_RS15815 PF13426 PAS domain M001_RS15815 PF08447 PAS fold M001_RS15815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS15835 PF05114 Protein of unknown function (DUF692) M001_RS15845 PF10725 Protein of unknown function (DUF2517) M001_RS15865 PF09308 LuxQ, periplasmic M001_RS15865 PF00072 Response regulator receiver domain M001_RS15865 PF00512 His Kinase A (phospho-acceptor) domain M001_RS15865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS15870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M001_RS15875 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS15880 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS15880 PF12911 N-terminal TM domain of oligopeptide transport permease C M001_RS15885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M001_RS15885 PF00005 ABC transporter M001_RS15890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M001_RS15890 PF00005 ABC transporter M001_RS15900 PF01869 BadF/BadG/BcrA/BcrD ATPase family M001_RS15905 PF02838 Glycosyl hydrolase family 20, domain 2 M001_RS15905 PF00728 Glycosyl hydrolase family 20, catalytic domain M001_RS15910 PF08447 PAS fold M001_RS15910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS15925 PF01131 DNA topoisomerase M001_RS15925 PF01396 Topoisomerase DNA binding C4 zinc finger M001_RS15925 PF01751 Toprim domain M001_RS15925 PF08272 Topoisomerase I zinc-ribbon-like M001_RS15930 PF04996 Succinylarginine dihydrolase M001_RS15960 PF12838 4Fe-4S dicluster domain M001_RS15970 PF02635 DsrE/DsrF-like family M001_RS15975 PF00990 Diguanylate cyclase, GGDEF domain M001_RS15980 PF07690 Major Facilitator Superfamily M001_RS15985 PF08496 Peptidase family S49 N-terminal M001_RS15985 PF01343 Peptidase family S49 M001_RS15990 PF00106 short chain dehydrogenase M001_RS15995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS15995 PF03466 LysR substrate binding domain M001_RS16000 PF07690 Major Facilitator Superfamily M001_RS16005 PF00155 Aminotransferase class I and II M001_RS16025 PF01161 Phosphatidylethanolamine-binding protein M001_RS16035 PF01204 Trehalase M001_RS16045 PF03167 Uracil DNA glycosylase superfamily M001_RS16055 PF01228 Glycine radical M001_RS16060 PF00375 Sodium:dicarboxylate symporter family M001_RS16065 PF00793 DAHP synthetase I family M001_RS16070 PF13369 Transglutaminase-like superfamily M001_RS16080 PF13847 Methyltransferase domain M001_RS16080 PF17827 PrmC N-terminal domain M001_RS16085 PF00472 RF-1 domain M001_RS16085 PF03462 PCRF domain M001_RS16090 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M001_RS16090 PF01488 Shikimate / quinate 5-dehydrogenase M001_RS16090 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M001_RS16095 PF03550 Outer membrane lipoprotein LolB M001_RS16100 PF08544 GHMP kinases C terminal M001_RS16100 PF00288 GHMP kinases N terminal domain M001_RS16110 PF14572 Phosphoribosyl synthetase-associated domain M001_RS16110 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M001_RS16115 PF02872 5'-nucleotidase, C-terminal domain M001_RS16115 PF00149 Calcineurin-like phosphoesterase M001_RS16120 PF01195 Peptidyl-tRNA hydrolase M001_RS16125 PF01926 50S ribosome-binding GTPase M001_RS16125 PF06071 Protein of unknown function (DUF933) M001_RS16170 PF03600 Citrate transporter M001_RS16170 PF02080 TrkA-C domain M001_RS16175 PF04973 Nicotinamide mononucleotide transporter M001_RS16180 PF01048 Phosphorylase superfamily M001_RS16195 PF07859 alpha/beta hydrolase fold M001_RS16210 PF00012 Hsp70 protein M001_RS16220 PF11941 Domain of unknown function (DUF3459) M001_RS16220 PF00128 Alpha amylase, catalytic domain M001_RS16225 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase M001_RS16225 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg M001_RS16225 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M001_RS16225 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II M001_RS16225 PF10371 Domain of unknown function M001_RS16230 PF07690 Major Facilitator Superfamily M001_RS16235 PF13419 Haloacid dehalogenase-like hydrolase M001_RS16250 PF00171 Aldehyde dehydrogenase family M001_RS16255 PF04958 Arginine N-succinyltransferase beta subunit M001_RS16260 PF00202 Aminotransferase class-III M001_RS16265 PF00117 Glutamine amidotransferase class-I M001_RS16275 PF00579 tRNA synthetases class I (W and Y) M001_RS16280 PF13419 Haloacid dehalogenase-like hydrolase M001_RS16285 PF00834 Ribulose-phosphate 3 epimerase family M001_RS16290 PF02086 D12 class N6 adenine-specific DNA methyltransferase M001_RS16300 PF01761 3-dehydroquinate synthase M001_RS16305 PF01202 Shikimate kinase M001_RS16310 PF11741 AMIN domain M001_RS16310 PF00263 Bacterial type II and III secretion system protein M001_RS16310 PF03958 Bacterial type II/III secretion system short domain M001_RS16310 PF07660 Secretin and TonB N terminus short domain M001_RS16335 PF17092 Penicillin-binding protein OB-like domain M001_RS16335 PF00912 Transglycosylase M001_RS16335 PF00905 Penicillin binding protein transpeptidase domain M001_RS16340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS16340 PF03466 LysR substrate binding domain M001_RS16345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS16345 PF00672 HAMP domain M001_RS16360 PF03466 LysR substrate binding domain M001_RS16360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS16370 PF01476 LysM domain M001_RS16370 PF08525 Opacity-associated protein A N-terminal motif M001_RS16370 PF01551 Peptidase family M23 M001_RS16380 PF12795 Mechanosensitive ion channel porin domain M001_RS16380 PF12794 Mechanosensitive ion channel inner membrane domain 1 M001_RS16380 PF00924 Mechanosensitive ion channel M001_RS16385 PF03009 Glycerophosphoryl diester phosphodiesterase family M001_RS16390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS16390 PF02743 Cache domain M001_RS16390 PF00672 HAMP domain M001_RS16395 PF00890 FAD binding domain M001_RS16395 PF02910 Fumarate reductase flavoprotein C-term M001_RS16400 PF13085 2Fe-2S iron-sulfur cluster binding domain M001_RS16400 PF13183 4Fe-4S dicluster domain M001_RS16405 PF02300 Fumarate reductase subunit C M001_RS16410 PF02313 Fumarate reductase subunit D M001_RS16415 PF07670 Nucleoside recognition M001_RS16420 PF07670 Nucleoside recognition M001_RS16425 PF01546 Peptidase family M20/M25/M40 M001_RS16425 PF07687 Peptidase dimerisation domain M001_RS16435 PF06224 Winged helix DNA-binding domain M001_RS16440 PF17932 Tetracyclin repressor-like, C-terminal domain M001_RS16440 PF00440 Bacterial regulatory proteins, tetR family M001_RS16450 PF01266 FAD dependent oxidoreductase M001_RS16465 PF00501 AMP-binding enzyme M001_RS16475 PF00106 short chain dehydrogenase M001_RS16485 PF00486 Transcriptional regulatory protein, C terminal M001_RS16485 PF00072 Response regulator receiver domain M001_RS16490 PF00512 His Kinase A (phospho-acceptor) domain M001_RS16490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS16490 PF08521 Two-component sensor kinase N-terminal M001_RS16500 PF00478 IMP dehydrogenase / GMP reductase domain M001_RS16510 PF01132 Elongation factor P (EF-P) OB domain M001_RS16510 PF09285 Elongation factor P, C-terminal M001_RS16510 PF08207 Elongation factor P (EF-P) KOW-like domain M001_RS16520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M001_RS16520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M001_RS16535 PF13419 Haloacid dehalogenase-like hydrolase M001_RS16545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS16545 PF03466 LysR substrate binding domain M001_RS16550 PF05230 MASE2 domain M001_RS16550 PF00990 Diguanylate cyclase, GGDEF domain M001_RS16555 PF00313 'Cold-shock' DNA-binding domain M001_RS16560 PF00857 Isochorismatase family M001_RS16565 PF01494 FAD binding domain M001_RS16570 PF01938 TRAM domain M001_RS16570 PF00919 Uncharacterized protein family UPF0004 M001_RS16570 PF04055 Radical SAM superfamily M001_RS16575 PF02562 PhoH-like protein M001_RS16580 PF02130 Uncharacterized protein family UPF0054 M001_RS16585 PF00571 CBS domain M001_RS16585 PF03471 Transporter associated domain M001_RS16590 PF00795 Carbon-nitrogen hydrolase M001_RS16595 PF02508 Rnf-Nqr subunit, membrane protein M001_RS16605 PF13411 MerR HTH family regulatory protein M001_RS16610 PF02272 DHHA1 domain M001_RS16610 PF01368 DHH family M001_RS16610 PF17768 RecJ OB domain M001_RS16620 PF01741 Large-conductance mechanosensitive channel, MscL M001_RS16625 PF00990 Diguanylate cyclase, GGDEF domain M001_RS16625 PF00072 Response regulator receiver domain M001_RS16630 PF02899 Phage integrase, N-terminal SAM-like domain M001_RS16630 PF00589 Phage integrase family M001_RS16635 PF00258 Flavodoxin M001_RS16640 PF01523 Putative modulator of DNA gyrase M001_RS16645 PF01523 Putative modulator of DNA gyrase M001_RS16650 PF07295 Zinc-ribbon containing domain M001_RS16655 PF13603 Leucyl-tRNA synthetase, Domain 2 M001_RS16655 PF00133 tRNA synthetases class I (I, L, M and V) M001_RS16655 PF08264 Anticodon-binding domain of tRNA M001_RS16670 PF01467 Cytidylyltransferase-like M001_RS16680 PF02590 Predicted SPOUT methyltransferase M001_RS16685 PF03717 Penicillin-binding Protein dimerisation domain M001_RS16685 PF00905 Penicillin binding protein transpeptidase domain M001_RS16690 PF01098 Cell cycle protein M001_RS16695 PF13406 Transglycosylase SLT domain M001_RS16700 PF05036 Sporulation related domain M001_RS16700 PF03330 Lytic transglycolase M001_RS16705 PF00768 D-alanyl-D-alanine carboxypeptidase M001_RS16705 PF07943 Penicillin-binding protein 5, C-terminal domain M001_RS16710 PF04359 Protein of unknown function (DUF493) M001_RS16715 PF03099 Biotin/lipoate A/B protein ligase family M001_RS16720 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family M001_RS16720 PF04055 Radical SAM superfamily M001_RS16735 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M001_RS16735 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M001_RS16740 PF07023 Protein of unknown function (DUF1315) M001_RS16745 PF00710 Asparaginase, N-terminal M001_RS16745 PF17763 Glutaminase/Asparaginase C-terminal domain M001_RS16750 PF03616 Sodium/glutamate symporter M001_RS16755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS16755 PF00672 HAMP domain M001_RS16755 PF02743 Cache domain M001_RS16765 PF01336 OB-fold nucleic acid binding domain M001_RS16765 PF00152 tRNA synthetases class II (D, K and N) M001_RS16770 PF00667 FAD binding domain M001_RS16770 PF00258 Flavodoxin M001_RS16770 PF00175 Oxidoreductase NAD-binding domain M001_RS16775 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M001_RS16775 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M001_RS16780 PF01507 Phosphoadenosine phosphosulfate reductase family M001_RS16785 PF00186 Dihydrofolate reductase M001_RS16790 PF12821 Threonine/Serine exporter, ThrE M001_RS16795 PF06738 Putative threonine/serine exporter M001_RS16805 PF00994 Probable molybdopterin binding domain M001_RS16815 PF06004 Bacterial protein of unknown function (DUF903) M001_RS16820 PF00581 Rhodanese-like domain M001_RS16825 PF04960 Glutaminase M001_RS16830 PF04320 Protein with unknown function (DUF469) M001_RS16835 PF02390 Putative methyltransferase M001_RS16840 PF00155 Aminotransferase class I and II M001_RS16845 PF12792 CSS motif domain associated with EAL M001_RS16845 PF00563 EAL domain M001_RS16850 PF01370 NAD dependent epimerase/dehydratase family M001_RS16850 PF08338 Domain of unknown function (DUF1731) M001_RS16860 PF00005 ABC transporter M001_RS16865 PF13472 GDSL-like Lipase/Acylhydrolase family M001_RS16870 PF00072 Response regulator receiver domain M001_RS16870 PF01584 CheW-like domain M001_RS16875 PF00704 Glycosyl hydrolases family 18 M001_RS16875 PF06483 Chitinase C M001_RS16910 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading M001_RS16910 PF18416 N-acetylglucosamine binding protein domain 2 M001_RS16915 PF12561 ToxR activated gene A lipoprotein domain M001_RS16915 PF17945 Beta/Gamma crystallin M001_RS16920 PF08329 Chitinase A, N-terminal domain M001_RS16920 PF00704 Glycosyl hydrolases family 18 M001_RS16925 PF08448 PAS fold M001_RS16925 PF00990 Diguanylate cyclase, GGDEF domain M001_RS16930 PF00704 Glycosyl hydrolases family 18 M001_RS16930 PF08329 Chitinase A, N-terminal domain M001_RS16935 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M001_RS16935 PF00072 Response regulator receiver domain M001_RS16935 PF01627 Hpt domain M001_RS16935 PF00512 His Kinase A (phospho-acceptor) domain M001_RS16935 PF00672 HAMP domain M001_RS16935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS16945 PF13443 Cro/C1-type HTH DNA-binding domain M001_RS16955 PF12832 MFS_1 like family M001_RS16990 PF04717 Type VI secretion system, phage-baseplate injector M001_RS16995 PF05638 Type VI secretion system effector, Hcp M001_RS17005 PF07715 TonB-dependent Receptor Plug Domain M001_RS17005 PF00593 TonB dependent receptor M001_RS17025 PF01243 Pyridoxamine 5'-phosphate oxidase M001_RS17030 PF06228 Haem utilisation ChuX/HutX M001_RS17040 PF01032 FecCD transport family M001_RS17045 PF00005 ABC transporter M001_RS17055 PF03575 Peptidase family S51 M001_RS17060 PF01894 Uncharacterised protein family UPF0047 M001_RS17065 PF00842 Alanine racemase, C-terminal domain M001_RS17065 PF01168 Alanine racemase, N-terminal domain M001_RS17070 PF03796 DnaB-like helicase C terminal domain M001_RS17070 PF00772 DnaB-like helicase N terminal domain M001_RS17080 PF02872 5'-nucleotidase, C-terminal domain M001_RS17080 PF00149 Calcineurin-like phosphoesterase M001_RS17100 PF02954 Bacterial regulatory protein, Fis family M001_RS17100 PF00158 Sigma-54 interaction domain M001_RS17100 PF00072 Response regulator receiver domain M001_RS17105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M001_RS17105 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M001_RS17115 PF04102 SlyX M001_RS17120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M001_RS17125 PF09526 Probable metal-binding protein (DUF2387) M001_RS17135 PF00072 Response regulator receiver domain M001_RS17135 PF01584 CheW-like domain M001_RS17140 PF00561 alpha/beta hydrolase fold M001_RS17145 PF00990 Diguanylate cyclase, GGDEF domain M001_RS17145 PF00360 Phytochrome region M001_RS17145 PF01590 GAF domain M001_RS17145 PF00563 EAL domain M001_RS17150 PF06794 Uncharacterised protein family (UPF0270) M001_RS17155 PF00485 Phosphoribulokinase / Uridine kinase family M001_RS17170 PF02566 OsmC-like protein M001_RS17175 PF00027 Cyclic nucleotide-binding domain M001_RS17175 PF13545 Crp-like helix-turn-helix domain M001_RS17180 PF08241 Methyltransferase domain M001_RS17185 PF00267 Gram-negative porin M001_RS17195 PF00582 Universal stress protein family M001_RS17210 PF00294 pfkB family carbohydrate kinase M001_RS17215 PF04227 Indigoidine synthase A like protein M001_RS17220 PF00194 Eukaryotic-type carbonic anhydrase M001_RS17225 PF00561 alpha/beta hydrolase fold M001_RS17240 PF06877 Regulator of ribonuclease activity B M001_RS17245 PF00563 EAL domain M001_RS17245 PF00990 Diguanylate cyclase, GGDEF domain M001_RS17245 PF03707 Bacterial signalling protein N terminal repeat M001_RS17260 PF02080 TrkA-C domain M001_RS17260 PF06826 Predicted Permease Membrane Region M001_RS17265 PF03006 Haemolysin-III related M001_RS17270 PF00282 Pyridoxal-dependent decarboxylase conserved domain M001_RS17275 PF04279 Intracellular septation protein A M001_RS17280 PF03795 YCII-related domain M001_RS17285 PF00459 Inositol monophosphatase family M001_RS17290 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M001_RS17295 PF11967 Recombination protein O N terminal M001_RS17295 PF02565 Recombination protein O C terminal M001_RS17300 PF07650 KH domain M001_RS17300 PF01926 50S ribosome-binding GTPase M001_RS17305 PF14622 Ribonuclease-III-like M001_RS17305 PF00035 Double-stranded RNA binding motif M001_RS17310 PF10502 Signal peptidase, peptidase S26 M001_RS17315 PF00679 Elongation factor G C-terminus M001_RS17315 PF00009 Elongation factor Tu GTP binding domain M001_RS17315 PF03144 Elongation factor Tu domain 2 M001_RS17315 PF06421 GTP-binding protein LepA C-terminus M001_RS17325 PF17188 MucB/RseB C-terminal domain M001_RS17325 PF03888 MucB/RseB N-terminal domain M001_RS17330 PF03872 Anti sigma-E protein RseA, N-terminal domain M001_RS17330 PF03873 Anti sigma-E protein RseA, C-terminal domain M001_RS17335 PF08281 Sigma-70, region 4 M001_RS17335 PF04542 Sigma-70 region 2 M001_RS17340 PF00890 FAD binding domain M001_RS17340 PF02910 Fumarate reductase flavoprotein C-term M001_RS17350 PF03937 Flavinator of succinate dehydrogenase M001_RS17355 PF01571 Aminomethyltransferase folate-binding domain M001_RS17360 PF03466 LysR substrate binding domain M001_RS17360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS17375 PF03091 CutA1 divalent ion tolerance protein M001_RS17380 PF11412 Disulphide bond corrector protein DsbC M001_RS17380 PF02683 Cytochrome C biogenesis protein transmembrane region M001_RS17400 PF01266 FAD dependent oxidoreductase M001_RS17405 PF01116 Fructose-bisphosphate aldolase class-II M001_RS17410 PF00162 Phosphoglycerate kinase M001_RS17415 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M001_RS17415 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M001_RS17420 PF00480 ROK family M001_RS17425 PF01208 Uroporphyrinogen decarboxylase (URO-D) M001_RS17430 PF00293 NUDIX domain M001_RS17430 PF09297 NADH pyrophosphatase zinc ribbon domain M001_RS17435 PF14850 DNA-binding domain of Proline dehydrogenase M001_RS17435 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M001_RS17435 PF00171 Aldehyde dehydrogenase family M001_RS17435 PF01619 Proline dehydrogenase M001_RS17440 PF08239 Bacterial SH3 domain M001_RS17445 PF00520 Ion transport protein M001_RS17445 PF00027 Cyclic nucleotide-binding domain M001_RS17450 PF00672 HAMP domain M001_RS17450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS17455 PF08335 GlnD PII-uridylyltransferase M001_RS17455 PF03710 Glutamate-ammonia ligase adenylyltransferase M001_RS17480 PF00486 Transcriptional regulatory protein, C terminal M001_RS17480 PF00072 Response regulator receiver domain M001_RS17495 PF00293 NUDIX domain M001_RS17495 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain M001_RS17495 PF09297 NADH pyrophosphatase zinc ribbon domain M001_RS17520 PF03060 Nitronate monooxygenase M001_RS17525 PF00445 Ribonuclease T2 family M001_RS17535 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase M001_RS17545 PF00990 Diguanylate cyclase, GGDEF domain M001_RS17550 PF00270 DEAD/DEAH box helicase M001_RS17550 PF00271 Helicase conserved C-terminal domain M001_RS17560 PF00753 Metallo-beta-lactamase superfamily M001_RS17580 PF01425 Amidase M001_RS17585 PF04371 Porphyromonas-type peptidyl-arginine deiminase M001_RS17590 PF03466 LysR substrate binding domain M001_RS17590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS17595 PF04480 Protein of unknown function (DUF559) M001_RS17605 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M001_RS17610 PF00140 Sigma-70 factor, region 1.2 M001_RS17610 PF04545 Sigma-70, region 4 M001_RS17610 PF04539 Sigma-70 region 3 M001_RS17610 PF04542 Sigma-70 region 2 M001_RS17615 PF01476 LysM domain M001_RS17615 PF01551 Peptidase family M23 M001_RS17620 PF09335 SNARE associated Golgi protein M001_RS17630 PF01975 Survival protein SurE M001_RS17635 PF01142 tRNA pseudouridine synthase D (TruD) M001_RS17640 PF02542 YgbB family M001_RS17645 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M001_RS17650 PF04977 Septum formation initiator M001_RS17655 PF00474 Sodium:solute symporter family M001_RS17665 PF17969 L,D-transpeptidase C-terminal domain M001_RS17665 PF03734 L,D-transpeptidase catalytic domain M001_RS17670 PF00924 Mechanosensitive ion channel M001_RS17675 PF00871 Acetokinase family M001_RS17680 PF04074 YhcH/YjgK/YiaL M001_RS17690 PF01177 Asp/Glu/Hydantoin racemase M001_RS17695 PF01810 LysE type translocator M001_RS17705 PF00392 Bacterial regulatory proteins, gntR family M001_RS17705 PF00155 Aminotransferase class I and II M001_RS17720 PF00571 CBS domain M001_RS17720 PF01368 DHH family M001_RS17720 PF02272 DHHA1 domain M001_RS17720 PF01743 Poly A polymerase head domain M001_RS17725 PF00005 ABC transporter M001_RS17725 PF12848 ABC transporter M001_RS17735 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M001_RS17795 PF00113 Enolase, C-terminal TIM barrel domain M001_RS17795 PF03952 Enolase, N-terminal domain M001_RS17800 PF06418 CTP synthase N-terminus M001_RS17800 PF00117 Glutamine amidotransferase class-I M001_RS17805 PF03819 MazG nucleotide pyrophosphohydrolase domain M001_RS17810 PF02824 TGS domain M001_RS17810 PF04607 Region found in RelA / SpoT proteins M001_RS17810 PF13291 ACT domain M001_RS17815 PF01938 TRAM domain M001_RS17815 PF05958 tRNA (Uracil-5-)-methyltransferase M001_RS17820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS17820 PF00072 Response regulator receiver domain M001_RS17820 PF00672 HAMP domain M001_RS17820 PF01627 Hpt domain M001_RS17820 PF00512 His Kinase A (phospho-acceptor) domain M001_RS17820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M001_RS17825 PF07308 Protein of unknown function (DUF1456) M001_RS17830 PF01510 N-acetylmuramoyl-L-alanine amidase M001_RS17835 PF00210 Ferritin-like domain M001_RS17840 PF03063 Prismane/CO dehydrogenase family M001_RS17845 PF00970 Oxidoreductase FAD-binding domain M001_RS17845 PF00042 Globin M001_RS17845 PF00175 Oxidoreductase NAD-binding domain M001_RS17850 PF01370 NAD dependent epimerase/dehydratase family M001_RS17855 PF01569 PAP2 superfamily M001_RS17860 PF01225 Mur ligase family, catalytic domain M001_RS17860 PF02875 Mur ligase family, glutamate ligase domain M001_RS17860 PF08245 Mur ligase middle domain M001_RS17865 PF02441 Flavoprotein M001_RS17870 PF00440 Bacterial regulatory proteins, tetR family M001_RS17875 PF00156 Phosphoribosyl transferase domain M001_RS17880 PF00005 ABC transporter M001_RS17885 PF01061 ABC-2 type transporter M001_RS17920 PF02569 Pantoate-beta-alanine ligase M001_RS17925 PF02548 Ketopantoate hydroxymethyltransferase M001_RS17930 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M001_RS17935 PF01743 Poly A polymerase head domain M001_RS17935 PF12626 Polymerase A arginine-rich C-terminus M001_RS17935 PF12627 Probable RNA and SrmB- binding site of polymerase A M001_RS17940 PF00749 tRNA synthetases class I (E and Q), catalytic domain M001_RS17945 PF01258 Prokaryotic dksA/traR C4-type zinc finger M001_RS17950 PF17746 SfsA N-terminal OB domain M001_RS17950 PF03749 Sugar fermentation stimulation protein RE domain M001_RS17960 PF00271 Helicase conserved C-terminal domain M001_RS17960 PF04408 Helicase associated domain (HA2) M001_RS17960 PF00270 DEAD/DEAH box helicase M001_RS17960 PF08482 ATP-dependent helicase C-terminal M001_RS17965 PF00905 Penicillin binding protein transpeptidase domain M001_RS17965 PF14814 Bifunctional transglycosylase second domain M001_RS17965 PF00912 Transglycosylase M001_RS17970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M001_RS17975 PF00893 Small Multidrug Resistance protein M001_RS17980 PF00893 Small Multidrug Resistance protein M001_RS17990 PF11849 Domain of unknown function (DUF3369) M001_RS17995 PF00719 Inorganic pyrophosphatase M001_RS18010 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) M001_RS18025 PF00005 ABC transporter M001_RS18045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS18045 PF08447 PAS fold M001_RS18065 PF02080 TrkA-C domain M001_RS18065 PF03600 Citrate transporter M001_RS18070 PF00009 Elongation factor Tu GTP binding domain M001_RS18075 PF01507 Phosphoadenosine phosphosulfate reductase family M001_RS18080 PF10414 Sirohaem synthase dimerisation region M001_RS18080 PF14824 Sirohaem biosynthesis protein central M001_RS18080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M001_RS18085 PF16200 C-terminal region of band_7 M001_RS18085 PF01145 SPFH domain / Band 7 family M001_RS18090 PF01957 NfeD-like C-terminal, partner-binding M001_RS18095 PF00672 HAMP domain M001_RS18095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS18100 PF02445 Quinolinate synthetase A protein M001_RS18105 PF01263 Aldose 1-epimerase M001_RS18110 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M001_RS18110 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M001_RS18115 PF02446 4-alpha-glucanotransferase M001_RS18120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M001_RS18120 PF00128 Alpha amylase, catalytic domain M001_RS18120 PF02806 Alpha amylase, C-terminal all-beta domain M001_RS18125 PF00128 Alpha amylase, catalytic domain M001_RS18125 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M001_RS18130 PF01641 SelR domain M001_RS18140 PF13344 Haloacid dehalogenase-like hydrolase M001_RS18140 PF00293 NUDIX domain M001_RS18155 PF01037 Lrp/AsnC ligand binding domain M001_RS18165 PF07690 Major Facilitator Superfamily M001_RS18185 PF00209 Sodium:neurotransmitter symporter family M001_RS18195 PF00209 Sodium:neurotransmitter symporter family M001_RS18260 PF16331 TolA binding protein trimerisation M001_RS18260 PF13174 Tetratricopeptide repeat M001_RS18265 PF00691 OmpA family M001_RS18270 PF07676 WD40-like Beta Propeller Repeat M001_RS18270 PF04052 TolB amino-terminal domain M001_RS18280 PF02472 Biopolymer transport protein ExbD/TolR M001_RS18285 PF01618 MotA/TolQ/ExbB proton channel family M001_RS18290 PF03061 Thioesterase superfamily M001_RS18295 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) M001_RS18300 PF08173 Membrane bound YbgT-like protein M001_RS18305 PF02322 Cytochrome bd terminal oxidase subunit II M001_RS18310 PF01654 Cytochrome bd terminal oxidase subunit I M001_RS18315 PF05496 Holliday junction DNA helicase RuvB P-loop domain M001_RS18315 PF17864 RuvB AAA lid domain M001_RS18315 PF05491 RuvB C-terminal winged helix domain M001_RS18320 PF07499 RuvA, C-terminal domain M001_RS18320 PF01330 RuvA N terminal domain M001_RS18325 PF00672 HAMP domain M001_RS18325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS18330 PF01810 LysE type translocator M001_RS18335 PF00196 Bacterial regulatory proteins, luxR family M001_RS18335 PF03472 Autoinducer binding domain M001_RS18340 PF00765 Autoinducer synthase M001_RS18345 PF03466 LysR substrate binding domain M001_RS18345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS18350 PF08206 Ribonuclease B OB domain M001_RS18350 PF00773 RNB domain M001_RS18350 PF17876 Cold shock domain M001_RS18355 PF00360 Phytochrome region M001_RS18355 PF00990 Diguanylate cyclase, GGDEF domain M001_RS18355 PF00563 EAL domain M001_RS18355 PF01590 GAF domain M001_RS18365 PF13419 Haloacid dehalogenase-like hydrolase M001_RS18370 PF17209 Hfq protein M001_RS18375 PF04403 Paraquat-inducible protein A M001_RS18380 PF02470 MlaD protein M001_RS18390 PF05958 tRNA (Uracil-5-)-methyltransferase M001_RS18390 PF01938 TRAM domain M001_RS18395 PF04073 Aminoacyl-tRNA editing domain M001_RS18395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M001_RS18395 PF03129 Anticodon binding domain M001_RS18400 PF00106 short chain dehydrogenase M001_RS18415 PF00378 Enoyl-CoA hydratase/isomerase M001_RS18420 PF10952 Protein of unknown function (DUF2753) M001_RS18425 PF00132 Bacterial transferase hexapeptide (six repeats) M001_RS18435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M001_RS18445 PF08447 PAS fold M001_RS18445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS18450 PF01207 Dihydrouridine synthase (Dus) M001_RS18455 PF01475 Ferric uptake regulator family M001_RS18470 PF05525 Branched-chain amino acid transport protein M001_RS18475 PF05525 Branched-chain amino acid transport protein M001_RS18480 PF05175 Methyltransferase small domain M001_RS18485 PF00270 DEAD/DEAH box helicase M001_RS18485 PF00271 Helicase conserved C-terminal domain M001_RS18490 PF13673 Acetyltransferase (GNAT) domain M001_RS18500 PF08032 RNA 2'-O ribose methyltransferase substrate binding M001_RS18500 PF00588 SpoU rRNA Methylase family M001_RS18520 PF00575 S1 RNA binding domain M001_RS18520 PF08461 Ribonuclease R winged-helix domain M001_RS18520 PF08206 Ribonuclease B OB domain M001_RS18520 PF17876 Cold shock domain M001_RS18520 PF00773 RNB domain M001_RS18525 PF00990 Diguanylate cyclase, GGDEF domain M001_RS18530 PF01389 OmpA-like transmembrane domain M001_RS18530 PF00691 OmpA family M001_RS18535 PF00657 GDSL-like Lipase/Acylhydrolase M001_RS18540 PF04076 Bacterial OB fold (BOF) protein M001_RS18545 PF01464 Transglycosylase SLT domain M001_RS18545 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain M001_RS18550 PF04362 Bacterial Fe(2+) trafficking M001_RS18555 PF10576 Iron-sulfur binding domain of endonuclease III M001_RS18555 PF14815 NUDIX domain M001_RS18555 PF00633 Helix-hairpin-helix motif M001_RS18555 PF00730 HhH-GPD superfamily base excision DNA repair protein M001_RS18560 PF01966 HD domain M001_RS18560 PF12627 Probable RNA and SrmB- binding site of polymerase A M001_RS18560 PF01743 Poly A polymerase head domain M001_RS18565 PF02028 BCCT, betaine/carnitine/choline family transporter M001_RS18580 PF04222 Protein of unknown function (DUF416) M001_RS18585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M001_RS18590 PF01551 Peptidase family M23 M001_RS18590 PF01476 LysM domain M001_RS18590 PF08525 Opacity-associated protein A N-terminal motif M001_RS18610 PF01297 Zinc-uptake complex component A periplasmic M001_RS18615 PF00005 ABC transporter M001_RS18620 PF00950 ABC 3 transport family M001_RS18625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS18625 PF03466 LysR substrate binding domain M001_RS18630 PF00892 EamA-like transporter family M001_RS18635 PF03167 Uracil DNA glycosylase superfamily M001_RS18640 PF00892 EamA-like transporter family M001_RS18650 PF01541 GIY-YIG catalytic domain M001_RS18665 PF04012 PspA/IM30 family M001_RS18670 PF01553 Acyltransferase M001_RS18690 PF00578 AhpC/TSA family M001_RS18695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS18695 PF03466 LysR substrate binding domain M001_RS18710 PF00226 DnaJ domain M001_RS18710 PF00684 DnaJ central domain M001_RS18710 PF01556 DnaJ C terminal domain M001_RS18735 PF00854 POT family M001_RS18740 PF07690 Major Facilitator Superfamily M001_RS18745 PF03466 LysR substrate binding domain M001_RS18745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS18755 PF03989 DNA gyrase C-terminal domain, beta-propeller M001_RS18755 PF00521 DNA gyrase/topoisomerase IV, subunit A M001_RS18760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS18760 PF01751 Toprim domain M001_RS18760 PF00204 DNA gyrase B M001_RS18760 PF00986 DNA gyrase B subunit, carboxyl terminus M001_RS18765 PF05728 Uncharacterised protein family (UPF0227) M001_RS18770 PF00149 Calcineurin-like phosphoesterase M001_RS18775 PF06853 Protein of unknown function (DUF1249) M001_RS18780 PF00293 NUDIX domain M001_RS18785 PF02321 Outer membrane efflux protein M001_RS18790 PF01467 Cytidylyltransferase-like M001_RS18790 PF00294 pfkB family carbohydrate kinase M001_RS18795 PF03279 Bacterial lipid A biosynthesis acyltransferase M001_RS18800 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M001_RS18800 PF02378 Phosphotransferase system, EIIC M001_RS18800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M001_RS18805 PF08125 Mannitol dehydrogenase C-terminal domain M001_RS18805 PF01232 Mannitol dehydrogenase Rossmann domain M001_RS18810 PF05068 Mannitol repressor M001_RS18820 PF01556 DnaJ C terminal domain M001_RS18820 PF00684 DnaJ central domain M001_RS18820 PF00226 DnaJ domain M001_RS18835 PF01544 CorA-like Mg2+ transporter protein M001_RS18840 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M001_RS18845 PF04307 LexA-binding, inner membrane-associated putative hydrolase M001_RS18850 PF07662 Na+ dependent nucleoside transporter C-terminus M001_RS18850 PF01773 Na+ dependent nucleoside transporter N-terminus M001_RS18850 PF07670 Nucleoside recognition M001_RS18855 PF00270 DEAD/DEAH box helicase M001_RS18855 PF00271 Helicase conserved C-terminal domain M001_RS18855 PF03880 DbpA RNA binding domain M001_RS18875 PF01040 UbiA prenyltransferase family M001_RS18880 PF00425 chorismate binding enzyme M001_RS18885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M001_RS18885 PF16582 Middle domain of thiamine pyrophosphate M001_RS18885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M001_RS18890 PF12697 Alpha/beta hydrolase family M001_RS18895 PF00378 Enoyl-CoA hydratase/isomerase M001_RS18900 PF13378 Enolase C-terminal domain-like M001_RS18905 PF00501 AMP-binding enzyme M001_RS18910 PF01752 Collagenase M001_RS18910 PF08453 Peptidase family M9 N-terminal M001_RS18915 PF02698 DUF218 domain M001_RS18920 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M001_RS18920 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M001_RS18930 PF00072 Response regulator receiver domain M001_RS18930 PF01584 CheW-like domain M001_RS18940 PF05127 Helicase M001_RS18940 PF17176 tRNA-binding domain M001_RS18940 PF13718 GNAT acetyltransferase 2 M001_RS18940 PF08351 Domain of unknown function (DUF1726) M001_RS18955 PF00210 Ferritin-like domain M001_RS18960 PF02142 MGS-like domain M001_RS18965 PF00465 Iron-containing alcohol dehydrogenase M001_RS18975 PF03577 Peptidase family C69 M001_RS18980 PF00106 short chain dehydrogenase M001_RS19000 PF02903 Alpha amylase, N-terminal ig-like domain M001_RS19000 PF00128 Alpha amylase, catalytic domain M001_RS19000 PF16657 Maltogenic Amylase, C-terminal domain M001_RS19020 PF00884 Sulfatase M001_RS19025 PF01037 Lrp/AsnC ligand binding domain M001_RS19035 PF04204 Homoserine O-succinyltransferase M001_RS19045 PF00994 Probable molybdopterin binding domain M001_RS19045 PF02464 Competence-damaged protein M001_RS19065 PF04363 Protein of unknown function (DUF496) M001_RS19100 PF07883 Cupin domain M001_RS19100 PF01381 Helix-turn-helix M001_RS19105 PF03594 Benzoate membrane transport protein M001_RS19115 PF02219 Methylenetetrahydrofolate reductase M001_RS19130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS19130 PF00672 HAMP domain M001_RS19135 PF03922 OmpW family M001_RS19140 PF17158 Membrane-associated sensor, integral membrane domain M001_RS19140 PF00990 Diguanylate cyclase, GGDEF domain M001_RS19145 PF17760 UvrA interaction domain M001_RS19145 PF17755 UvrA DNA-binding domain M001_RS19145 PF00005 ABC transporter M001_RS19165 PF03783 Curli production assembly/transport component CsgG M001_RS19175 PF10627 Curli assembly protein CsgE M001_RS19180 PF00196 Bacterial regulatory proteins, luxR family M001_RS19185 PF00436 Single-strand binding protein family M001_RS19195 PF01545 Cation efflux family M001_RS19195 PF16916 Dimerisation domain of Zinc Transporter M001_RS19205 PF00313 'Cold-shock' DNA-binding domain M001_RS19210 PF00860 Permease family M001_RS19220 PF02733 Dak1 domain M001_RS19225 PF02734 DAK2 domain M001_RS19230 PF05524 PEP-utilising enzyme, N-terminal M001_RS19230 PF00391 PEP-utilising enzyme, mobile domain M001_RS19230 PF03610 PTS system fructose IIA component M001_RS19230 PF00381 PTS HPr component phosphorylation site M001_RS19235 PF00465 Iron-containing alcohol dehydrogenase M001_RS19240 PF00989 PAS fold M001_RS19240 PF00158 Sigma-54 interaction domain M001_RS19240 PF02954 Bacterial regulatory protein, Fis family M001_RS19255 PF01594 AI-2E family transporter M001_RS19260 PF01569 PAP2 superfamily M001_RS19270 PF01479 S4 domain M001_RS19275 PF01430 Hsp33 protein M001_RS19285 PF00392 Bacterial regulatory proteins, gntR family M001_RS19290 PF01321 Creatinase/Prolidase N-terminal domain M001_RS19290 PF00557 Metallopeptidase family M24 M001_RS19295 PF11756 Nitrous oxide-stimulated promoter M001_RS19300 PF00583 Acetyltransferase (GNAT) family M001_RS19305 PF05433 Glycine zipper 2TM domain M001_RS19310 PF00909 Ammonium Transporter Family M001_RS19315 PF00990 Diguanylate cyclase, GGDEF domain M001_RS19325 PF06055 Exopolysaccharide synthesis, ExoD M001_RS19335 PF17151 Periplasmic sensor domain M001_RS19335 PF00990 Diguanylate cyclase, GGDEF domain M001_RS19345 PF00132 Bacterial transferase hexapeptide (six repeats) M001_RS19365 PF04055 Radical SAM superfamily M001_RS19365 PF06968 Biotin and Thiamin Synthesis associated domain M001_RS19370 PF05690 Thiazole biosynthesis protein ThiG M001_RS19380 PF00899 ThiF family M001_RS19385 PF02581 Thiamine monophosphate synthase M001_RS19390 PF01964 Radical SAM ThiC family M001_RS19390 PF13667 ThiC-associated domain M001_RS19395 PF03738 Glutathionylspermidine synthase preATP-grasp M001_RS19405 PF03994 Domain of Unknown Function (DUF350) M001_RS19410 PF03440 Aerolysin/Pertussis toxin (APT) domain M001_RS19410 PF01117 Aerolysin toxin M001_RS19425 PF00072 Response regulator receiver domain M001_RS19425 PF00486 Transcriptional regulatory protein, C terminal M001_RS19430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS19435 PF08443 RimK-like ATP-grasp domain M001_RS19435 PF18030 RimK PreATP-grasp domain M001_RS19440 PF02574 Homocysteine S-methyltransferase M001_RS19440 PF02310 B12 binding domain M001_RS19440 PF02607 B12 binding domain M001_RS19440 PF02965 Vitamin B12 dependent methionine synthase, activation domain M001_RS19440 PF00809 Pterin binding enzyme M001_RS19445 PF00999 Sodium/hydrogen exchanger family M001_RS19470 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) M001_RS19480 PF07690 Major Facilitator Superfamily M001_RS19485 PF01914 MarC family integral membrane protein M001_RS19495 PF01523 Putative modulator of DNA gyrase M001_RS19500 PF00795 Carbon-nitrogen hydrolase M001_RS19510 PF13116 Protein of unknown function M001_RS19510 PF13502 AsmA-like C-terminal region M001_RS19515 PF00575 S1 RNA binding domain M001_RS19515 PF10150 Ribonuclease E/G family M001_RS19520 PF02545 Maf-like protein M001_RS19525 PF04093 rod shape-determining protein MreD M001_RS19530 PF04085 rod shape-determining protein MreC M001_RS19560 PF07963 Prokaryotic N-terminal methylation motif M001_RS19560 PF14245 Type IV pilin PilA M001_RS19565 PF00114 Pilin (bacterial filament) M001_RS19565 PF07963 Prokaryotic N-terminal methylation motif M001_RS19580 PF00482 Type II secretion system (T2SS), protein F M001_RS19585 PF00437 Type II/IV secretion system protein M001_RS19585 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M001_RS19600 PF03958 Bacterial type II/III secretion system short domain M001_RS19600 PF00263 Bacterial type II and III secretion system protein M001_RS19630 PF17157 Gammaproteobacterial periplasmic sensor domain M001_RS19630 PF00563 EAL domain M001_RS19630 PF00990 Diguanylate cyclase, GGDEF domain M001_RS19635 PF00563 EAL domain M001_RS19635 PF12792 CSS motif domain associated with EAL M001_RS19640 PF01699 Sodium/calcium exchanger protein M001_RS19645 PF00221 Aromatic amino acid lyase M001_RS19650 PF01175 Urocanase Rossmann-like domain M001_RS19650 PF17392 Urocanase C-terminal domain M001_RS19650 PF17391 Urocanase N-terminal domain M001_RS19655 PF00491 Arginase family M001_RS19660 PF01979 Amidohydrolase family M001_RS19665 PF00392 Bacterial regulatory proteins, gntR family M001_RS19665 PF07702 UTRA domain M001_RS19670 PF00484 Carbonic anhydrase M001_RS19675 PF04545 Sigma-70, region 4 M001_RS19675 PF00140 Sigma-70 factor, region 1.2 M001_RS19675 PF04542 Sigma-70 region 2 M001_RS19680 PF18075 FtsX extracellular domain M001_RS19685 PF00005 ABC transporter M001_RS19690 PF00448 SRP54-type protein, GTPase domain M001_RS19690 PF02881 SRP54-type protein, helical bundle domain M001_RS19715 PF00999 Sodium/hydrogen exchanger family M001_RS19715 PF02254 TrkA-N domain M001_RS19720 PF02525 Flavodoxin-like fold M001_RS19725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS19725 PF03466 LysR substrate binding domain M001_RS19730 PF00106 short chain dehydrogenase M001_RS19745 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M001_RS19745 PF00326 Prolyl oligopeptidase family M001_RS19760 PF13091 PLD-like domain M001_RS19770 PF01464 Transglycosylase SLT domain M001_RS19770 PF00497 Bacterial extracellular solute-binding proteins, family 3 M001_RS19780 PF02416 mttA/Hcf106 family M001_RS19785 PF03466 LysR substrate binding domain M001_RS19785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS19790 PF01914 MarC family integral membrane protein M001_RS19795 PF10678 Protein of unknown function (DUF2492) M001_RS19800 PF00375 Sodium:dicarboxylate symporter family M001_RS19810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS19810 PF03466 LysR substrate binding domain M001_RS19815 PF13533 Biotin-lipoyl like M001_RS19820 PF07690 Major Facilitator Superfamily M001_RS19825 PF07947 YhhN family M001_RS19840 PF00440 Bacterial regulatory proteins, tetR family M001_RS19890 PF03144 Elongation factor Tu domain 2 M001_RS19890 PF00009 Elongation factor Tu GTP binding domain M001_RS19890 PF03143 Elongation factor Tu C-terminal domain M001_RS19895 PF00009 Elongation factor Tu GTP binding domain M001_RS19895 PF14492 Elongation Factor G, domain II M001_RS19895 PF03764 Elongation factor G, domain IV M001_RS19895 PF03144 Elongation factor Tu domain 2 M001_RS19895 PF00679 Elongation factor G C-terminus M001_RS19900 PF00177 Ribosomal protein S7p/S5e M001_RS19905 PF00164 Ribosomal protein S12/S23 M001_RS19910 PF04077 DsrH like protein M001_RS19915 PF02635 DsrE/DsrF-like family M001_RS19920 PF02635 DsrE/DsrF-like family M001_RS19925 PF01042 Endoribonuclease L-PSP M001_RS19930 PF08348 YheO-like PAS domain M001_RS19930 PF13309 HTH domain M001_RS19935 PF04997 RNA polymerase Rpb1, domain 1 M001_RS19935 PF00623 RNA polymerase Rpb1, domain 2 M001_RS19935 PF04983 RNA polymerase Rpb1, domain 3 M001_RS19935 PF04998 RNA polymerase Rpb1, domain 5 M001_RS19935 PF05000 RNA polymerase Rpb1, domain 4 M001_RS19940 PF04561 RNA polymerase Rpb2, domain 2 M001_RS19940 PF00562 RNA polymerase Rpb2, domain 6 M001_RS19940 PF10385 RNA polymerase beta subunit external 1 domain M001_RS19940 PF04565 RNA polymerase Rpb2, domain 3 M001_RS19940 PF04560 RNA polymerase Rpb2, domain 7 M001_RS19940 PF04563 RNA polymerase beta subunit M001_RS19945 PF16320 Ribosomal protein L7/L12 dimerisation domain M001_RS19945 PF00542 Ribosomal protein L7/L12 C-terminal domain M001_RS19950 PF00466 Ribosomal protein L10 M001_RS19955 PF00687 Ribosomal protein L1p/L10e family M001_RS19960 PF03946 Ribosomal protein L11, N-terminal domain M001_RS19960 PF00298 Ribosomal protein L11, RNA binding domain M001_RS19965 PF00467 KOW motif M001_RS19965 PF02357 Transcription termination factor nusG M001_RS19970 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M001_RS19980 PF00009 Elongation factor Tu GTP binding domain M001_RS19980 PF03143 Elongation factor Tu C-terminal domain M001_RS19980 PF03144 Elongation factor Tu domain 2 M001_RS19995 PF00485 Phosphoribulokinase / Uridine kinase family M001_RS20000 PF02237 Biotin protein ligase C terminal domain M001_RS20000 PF08279 HTH domain M001_RS20000 PF03099 Biotin/lipoate A/B protein ligase family M001_RS20005 PF01565 FAD binding domain M001_RS20005 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M001_RS20010 PF02254 TrkA-N domain M001_RS20010 PF02080 TrkA-C domain M001_RS20015 PF02386 Cation transport protein M001_RS20035 PF01751 Toprim domain M001_RS20035 PF01131 DNA topoisomerase M001_RS20045 PF00512 His Kinase A (phospho-acceptor) domain M001_RS20045 PF00497 Bacterial extracellular solute-binding proteins, family 3 M001_RS20045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS20050 PF03264 NapC/NirT cytochrome c family, N-terminal region M001_RS20055 PF01568 Molydopterin dinucleotide binding domain M001_RS20055 PF18364 Molybdopterin oxidoreductase N-terminal domain M001_RS20055 PF00384 Molybdopterin oxidoreductase M001_RS20065 PF08918 PhoQ Sensor M001_RS20065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS20070 PF00486 Transcriptional regulatory protein, C terminal M001_RS20070 PF00072 Response regulator receiver domain M001_RS20085 PF01794 Ferric reductase like transmembrane component M001_RS20090 PF00174 Oxidoreductase molybdopterin binding domain M001_RS20095 PF06496 Protein of unknown function (DUF1097) M001_RS20100 PF00072 Response regulator receiver domain M001_RS20100 PF00158 Sigma-54 interaction domain M001_RS20110 PF00512 His Kinase A (phospho-acceptor) domain M001_RS20110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS20130 PF00571 CBS domain M001_RS20130 PF00478 IMP dehydrogenase / GMP reductase domain M001_RS20135 PF10063 Uncharacterized integral membrane protein (DUF2301) M001_RS20145 PF01037 Lrp/AsnC ligand binding domain M001_RS20150 PF03590 Aspartate-ammonia ligase M001_RS20155 PF10431 C-terminal, D2-small domain, of ClpB protein M001_RS20155 PF02861 Clp amino terminal domain, pathogenicity island component M001_RS20155 PF17871 AAA lid domain M001_RS20155 PF07724 AAA domain (Cdc48 subfamily) M001_RS20155 PF00004 ATPase family associated with various cellular activities (AAA) M001_RS20165 PF00849 RNA pseudouridylate synthase M001_RS20165 PF01479 S4 domain M001_RS20170 PF13525 Outer membrane lipoprotein M001_RS20175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M001_RS20175 PF07992 Pyridine nucleotide-disulphide oxidoreductase M001_RS20180 PF00375 Sodium:dicarboxylate symporter family M001_RS20185 PF03313 Serine dehydratase alpha chain M001_RS20190 PF13309 HTH domain M001_RS20190 PF08348 YheO-like PAS domain M001_RS20200 PF02233 NAD(P) transhydrogenase beta subunit M001_RS20205 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M001_RS20205 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M001_RS20205 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M001_RS20210 PF00465 Iron-containing alcohol dehydrogenase M001_RS20215 PF12833 Helix-turn-helix domain M001_RS20215 PF06719 AraC-type transcriptional regulator N-terminus M001_RS20220 PF08212 Lipocalin-like domain M001_RS20225 PF02743 Cache domain M001_RS20225 PF00672 HAMP domain M001_RS20225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS20235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS20235 PF03466 LysR substrate binding domain M001_RS20255 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M001_RS20255 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M001_RS20260 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain M001_RS20260 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain M001_RS20265 PF02863 Arginine repressor, C-terminal domain M001_RS20265 PF01316 Arginine repressor, DNA binding domain M001_RS20270 PF03606 C4-dicarboxylate anaerobic carrier M001_RS20275 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M001_RS20275 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M001_RS20280 PF00696 Amino acid kinase family M001_RS20305 PF04055 Radical SAM superfamily M001_RS20305 PF06969 HemN C-terminal domain M001_RS20310 PF10675 Protein of unknown function (DUF2489) M001_RS20315 PF04220 Der GTPase activator (YihI) M001_RS20320 PF00034 Cytochrome c M001_RS20325 PF01926 50S ribosome-binding GTPase M001_RS20335 PF01488 Shikimate / quinate 5-dehydrogenase M001_RS20335 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M001_RS20335 PF08501 Shikimate dehydrogenase substrate binding domain M001_RS20340 PF01218 Coproporphyrinogen III oxidase M001_RS20345 PF01300 Telomere recombination M001_RS20350 PF00731 AIR carboxylase M001_RS20355 PF01396 Topoisomerase DNA binding C4 zinc finger M001_RS20360 PF04361 Protein of unknown function (DUF494) M001_RS20365 PF17782 DprA winged helix domain M001_RS20365 PF02481 DNA recombination-mediator protein A M001_RS20370 PF01476 LysM domain M001_RS20375 PF01327 Polypeptide deformylase M001_RS20380 PF02911 Formyl transferase, C-terminal domain M001_RS20380 PF00551 Formyl transferase M001_RS20385 PF01189 16S rRNA methyltransferase RsmB/F M001_RS20385 PF01029 NusB family M001_RS20390 PF02080 TrkA-C domain M001_RS20390 PF02254 TrkA-N domain M001_RS20395 PF02386 Cation transport protein M001_RS20405 PF03951 Glutamine synthetase, beta-Grasp domain M001_RS20405 PF00120 Glutamine synthetase, catalytic domain M001_RS20415 PF00989 PAS fold M001_RS20415 PF00512 His Kinase A (phospho-acceptor) domain M001_RS20415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS20420 PF02954 Bacterial regulatory protein, Fis family M001_RS20420 PF00158 Sigma-54 interaction domain M001_RS20420 PF00072 Response regulator receiver domain M001_RS20425 PF00962 Adenosine/AMP deaminase M001_RS20430 PF02646 RmuC family M001_RS20445 PF02082 Transcriptional regulator M001_RS20450 PF00294 pfkB family carbohydrate kinase M001_RS20455 PF03466 LysR substrate binding domain M001_RS20455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS20460 PF00117 Glutamine amidotransferase class-I M001_RS20460 PF00958 GMP synthase C terminal domain M001_RS20460 PF02540 NAD synthase M001_RS20465 PF00171 Aldehyde dehydrogenase family M001_RS20470 PF00202 Aminotransferase class-III M001_RS20475 PF07883 Cupin domain M001_RS20475 PF01381 Helix-turn-helix M001_RS20480 PF00171 Aldehyde dehydrogenase family M001_RS20490 PF00892 EamA-like transporter family M001_RS20495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS20500 PF04143 Sulphur transport M001_RS20505 PF00691 OmpA family M001_RS20505 PF01389 OmpA-like transmembrane domain M001_RS20510 PF00291 Pyridoxal-phosphate dependent enzyme M001_RS20510 PF00585 C-terminal regulatory domain of Threonine dehydratase M001_RS20515 PF00920 Dehydratase family M001_RS20520 PF01063 Amino-transferase class IV M001_RS20530 PF00205 Thiamine pyrophosphate enzyme, central domain M001_RS20530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M001_RS20530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M001_RS20535 PF01078 Magnesium chelatase, subunit ChlI M001_RS20535 PF13335 Magnesium chelatase, subunit ChlI C-terminal M001_RS20540 PF01553 Acyltransferase M001_RS20545 PF01553 Acyltransferase M001_RS20550 PF04463 Protein of unknown function (DUF523) M001_RS20560 PF00857 Isochorismatase family M001_RS20565 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M001_RS20565 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M001_RS20570 PF01323 DSBA-like thioredoxin domain M001_RS20575 PF01636 Phosphotransferase enzyme family M001_RS20580 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase M001_RS20580 PF13746 4Fe-4S dicluster domain M001_RS20580 PF12801 4Fe-4S binding domain M001_RS20585 PF06288 Protein of unknown function (DUF1040) M001_RS20590 PF00990 Diguanylate cyclase, GGDEF domain M001_RS20590 PF00563 EAL domain M001_RS20590 PF00360 Phytochrome region M001_RS20590 PF01590 GAF domain M001_RS20595 PF13411 MerR HTH family regulatory protein M001_RS20600 PF00403 Heavy-metal-associated domain M001_RS20605 PF00156 Phosphoribosyl transferase domain M001_RS20610 PF01138 3' exoribonuclease family, domain 1 M001_RS20610 PF03725 3' exoribonuclease family, domain 2 M001_RS20615 PF08340 Domain of unknown function (DUF1732) M001_RS20615 PF03755 YicC-like family, N-terminal region M001_RS20655 PF01420 Type I restriction modification DNA specificity domain M001_RS20660 PF02384 N-6 DNA Methylase M001_RS20660 PF12161 HsdM N-terminal domain M001_RS20665 PF00271 Helicase conserved C-terminal domain M001_RS20665 PF08463 EcoEI R protein C-terminal M001_RS20665 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) M001_RS20665 PF04851 Type III restriction enzyme, res subunit M001_RS20685 PF00196 Bacterial regulatory proteins, luxR family M001_RS20685 PF00072 Response regulator receiver domain M001_RS20690 PF01627 Hpt domain M001_RS20690 PF00072 Response regulator receiver domain M001_RS20690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS20690 PF00512 His Kinase A (phospho-acceptor) domain M001_RS20690 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M001_RS20690 PF00672 HAMP domain M001_RS20695 PF01551 Peptidase family M23 M001_RS20695 PF10145 Phage-related minor tail protein M001_RS20695 PF01464 Transglycosylase SLT domain M001_RS20700 PF01312 FlhB HrpN YscU SpaS Family M001_RS20705 PF01311 Bacterial export proteins, family 1 M001_RS20715 PF00813 FliP family M001_RS20740 PF00771 FHIPEP family M001_RS20745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M001_RS20745 PF02874 ATP synthase alpha/beta family, beta-barrel domain M001_RS20745 PF18269 T3SS EscN ATPase C-terminal domain M001_RS20785 PF04888 Secretion system effector C (SseC) like family M001_RS20830 PF03958 Bacterial type II/III secretion system short domain M001_RS20830 PF00263 Bacterial type II and III secretion system protein M001_RS20845 PF01965 DJ-1/PfpI family M001_RS20845 PF12833 Helix-turn-helix domain M001_RS20865 PF01514 Secretory protein of YscJ/FliF family M001_RS20880 PF07201 HrpJ-like domain M001_RS20885 PF03466 LysR substrate binding domain M001_RS20885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS20890 PF00107 Zinc-binding dehydrogenase M001_RS20890 PF08240 Alcohol dehydrogenase GroES-like domain M001_RS20895 PF00756 Putative esterase M001_RS20905 PF12867 DinB superfamily M001_RS20905 PF03781 Sulfatase-modifying factor enzyme 1 M001_RS20910 PF13593 SBF-like CPA transporter family (DUF4137) M001_RS20915 PF13520 Amino acid permease M001_RS20920 PF01588 Putative tRNA binding domain M001_RS20925 PF13520 Amino acid permease M001_RS20930 PF04074 YhcH/YjgK/YiaL M001_RS20935 PF02929 Beta galactosidase small chain M001_RS20935 PF00703 Glycosyl hydrolases family 2 M001_RS20935 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M001_RS20935 PF02837 Glycosyl hydrolases family 2, sugar binding domain M001_RS20935 PF16353 Domain of unknown function(DUF4981) M001_RS20940 PF00356 Bacterial regulatory proteins, lacI family M001_RS20975 PF00132 Bacterial transferase hexapeptide (six repeats) M001_RS20980 PF01612 3'-5' exonuclease M001_RS20980 PF01367 5'-3' exonuclease, C-terminal SAM fold M001_RS20980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M001_RS20980 PF00476 DNA polymerase family A M001_RS20990 PF06005 Cell division protein ZapB M001_RS21000 PF06426 Serine acetyltransferase, N-terminal M001_RS21000 PF00132 Bacterial transferase hexapeptide (six repeats) M001_RS21005 PF16916 Dimerisation domain of Zinc Transporter M001_RS21005 PF01545 Cation efflux family M001_RS21010 PF00486 Transcriptional regulatory protein, C terminal M001_RS21010 PF00072 Response regulator receiver domain M001_RS21015 PF16527 Two-component sensor protein CpxA, periplasmic domain M001_RS21015 PF00512 His Kinase A (phospho-acceptor) domain M001_RS21015 PF00672 HAMP domain M001_RS21015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS21020 PF00588 SpoU rRNA Methylase family M001_RS21025 PF01554 MatE M001_RS21030 PF02630 SCO1/SenC M001_RS21040 PF01726 LexA DNA binding domain M001_RS21040 PF00717 Peptidase S24-like M001_RS21045 PF01553 Acyltransferase M001_RS21050 PF01040 UbiA prenyltransferase family M001_RS21055 PF04345 Chorismate lyase M001_RS21075 PF08240 Alcohol dehydrogenase GroES-like domain M001_RS21075 PF00107 Zinc-binding dehydrogenase M001_RS21080 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M001_RS21085 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M001_RS21090 PF00535 Glycosyl transferase family 2 M001_RS21095 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M001_RS21100 PF01467 Cytidylyltransferase-like M001_RS21105 PF04393 Protein of unknown function (DUF535) M001_RS21110 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M001_RS21110 PF06827 Zinc finger found in FPG and IleRS M001_RS21110 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M001_RS21120 PF00471 Ribosomal protein L33 M001_RS21125 PF00830 Ribosomal L28 family M001_RS21130 PF04002 RadC-like JAB domain M001_RS21135 PF02441 Flavoprotein M001_RS21135 PF04127 DNA / pantothenate metabolism flavoprotein M001_RS21140 PF00692 dUTPase M001_RS21145 PF00440 Bacterial regulatory proteins, tetR family M001_RS21150 PF05552 Conserved TM helix M001_RS21150 PF00924 Mechanosensitive ion channel M001_RS21155 PF00342 Phosphoglucose isomerase M001_RS21160 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M001_RS21160 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M001_RS21165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M001_RS21165 PF03466 LysR substrate binding domain M001_RS21180 PF13607 Succinyl-CoA ligase like flavodoxin domain M001_RS21180 PF13380 CoA binding domain M001_RS21180 PF00583 Acetyltransferase (GNAT) family M001_RS21210 PF12724 Flavodoxin domain M001_RS21215 PF02386 Cation transport protein M001_RS21220 PF09186 Domain of unknown function (DUF1949) M001_RS21220 PF01205 Uncharacterized protein family UPF0029 M001_RS21225 PF00557 Metallopeptidase family M24 M001_RS21230 PF00501 AMP-binding enzyme M001_RS21230 PF13193 AMP-binding enzyme C-terminal domain M001_RS21235 PF00378 Enoyl-CoA hydratase/isomerase M001_RS21235 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M001_RS21235 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M001_RS21240 PF00108 Thiolase, N-terminal domain M001_RS21240 PF02803 Thiolase, C-terminal domain M001_RS21245 PF00486 Transcriptional regulatory protein, C terminal M001_RS21245 PF00072 Response regulator receiver domain M001_RS21250 PF00512 His Kinase A (phospho-acceptor) domain M001_RS21250 PF00672 HAMP domain M001_RS21250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS21255 PF01547 Bacterial extracellular solute-binding protein M001_RS21265 PF01206 Sulfurtransferase TusA M001_RS21270 PF01042 Endoribonuclease L-PSP M001_RS21275 PF00691 OmpA family M001_RS21275 PF13488 Glycine zipper M001_RS21280 PF03352 Methyladenine glycosylase M001_RS21285 PF02091 Glycyl-tRNA synthetase alpha subunit M001_RS21290 PF02092 Glycyl-tRNA synthetase beta subunit M001_RS21290 PF05746 DALR anticodon binding domain M001_RS21305 PF03707 Bacterial signalling protein N terminal repeat M001_RS21305 PF00990 Diguanylate cyclase, GGDEF domain M001_RS21305 PF00563 EAL domain M001_RS21310 PF03496 ADP-ribosyltransferase exoenzyme M001_RS21310 PF03545 Yersinia virulence determinant (YopE) M001_RS21315 PF03496 ADP-ribosyltransferase exoenzyme M001_RS21315 PF03545 Yersinia virulence determinant (YopE) M001_RS21320 PF05932 Tir chaperone protein (CesT) family M001_RS21330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M001_RS21330 PF00672 HAMP domain M001_RS21335 PF00356 Bacterial regulatory proteins, lacI family M001_RS21340 PF13458 Periplasmic binding protein M001_RS21345 PF02653 Branched-chain amino acid transport system / permease component M001_RS21350 PF02653 Branched-chain amino acid transport system / permease component M001_RS21350 PF11862 Domain of unknown function (DUF3382) M001_RS21355 PF12399 Branched-chain amino acid ATP-binding cassette transporter M001_RS21355 PF00005 ABC transporter M001_RS21360 PF00005 ABC transporter M001_RS21365 PF00581 Rhodanese-like domain M001_RS21370 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease M001_RS21370 PF01694 Rhomboid family M001_RS21375 PF12262 Bacterial virulence factor lipase N-terminal M001_RS21380 PF04380 Membrane fusogenic activity M001_RS21385 PF08448 PAS fold M001_RS21385 PF00563 EAL domain M001_RS21385 PF08447 PAS fold M001_RS21385 PF00990 Diguanylate cyclase, GGDEF domain M001_RS21390 PF00175 Oxidoreductase NAD-binding domain M001_RS21395 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase M001_RS21405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M001_RS21405 PF07498 Rho termination factor, N-terminal domain M001_RS21405 PF07497 Rho termination factor, RNA-binding domain M001_RS21410 PF00085 Thioredoxin M001_RS21415 PF00271 Helicase conserved C-terminal domain M001_RS21415 PF00270 DEAD/DEAH box helicase M001_RS21420 PF02541 Ppx/GppA phosphatase family M001_RS21430 PF04445 Putative SAM-dependent methyltransferase M001_RS21435 PF00563 EAL domain M001_RS21435 PF03707 Bacterial signalling protein N terminal repeat M001_RS21435 PF00990 Diguanylate cyclase, GGDEF domain M001_RS21440 PF01432 Peptidase family M3 M001_RS21445 PF00704 Glycosyl hydrolases family 18 M001_RS21450 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading M001_RS21450 PF18416 N-acetylglucosamine binding protein domain 2 M001_RS21455 PF00490 Delta-aminolevulinic acid dehydratase M001_RS21460 PF01026 TatD related DNase M001_RS21465 PF00902 Sec-independent protein translocase protein (TatC) M001_RS21470 PF02416 mttA/Hcf106 family M001_RS21475 PF02416 mttA/Hcf106 family M001_RS21480 PF03109 ABC1 family M001_RS21485 PF02036 SCP-2 sterol transfer family M001_RS21490 PF01209 ubiE/COQ5 methyltransferase family M001_RS21495 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M001_RS21500 PF07969 Amidohydrolase family M001_RS21505 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M001_RS21540 PF03544 Gram-negative bacterial TonB protein C-terminal M001_RS21545 PF02472 Biopolymer transport protein ExbD/TolR M001_RS21550 PF01618 MotA/TolQ/ExbB proton channel family M001_RS21555 PF01618 MotA/TolQ/ExbB proton channel family M001_RS21565 PF00196 Bacterial regulatory proteins, luxR family M001_RS21565 PF03472 Autoinducer binding domain M001_RS21570 PF01380 SIS domain M001_RS21575 PF00455 DeoR C terminal sensor domain M001_RS21575 PF08220 DeoR-like helix-turn-helix domain M001_RS21580 PF00072 Response regulator receiver domain M001_RS21580 PF00486 Transcriptional regulatory protein, C terminal M001_RS21585 PF00512 His Kinase A (phospho-acceptor) domain M001_RS21585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M001_RS21585 PF00672 HAMP domain M001_RS21590 PF00905 Penicillin binding protein transpeptidase domain M001_RS21600 PF06123 Inner membrane protein CreD M001_RS21605 PF00132 Bacterial transferase hexapeptide (six repeats) M001_RS21605 PF14602 Hexapeptide repeat of succinyl-transferase M001_RS21605 PF12804 MobA-like NTP transferase domain M001_RS21610 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M001_RS21610 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M001_RS21615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M001_RS21615 PF02874 ATP synthase alpha/beta family, beta-barrel domain M001_RS21620 PF00231 ATP synthase M001_RS21625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M001_RS21625 PF02874 ATP synthase alpha/beta family, beta-barrel domain M001_RS21625 PF00306 ATP synthase alpha/beta chain, C terminal domain M001_RS21630 PF00213 ATP synthase delta (OSCP) subunit M001_RS21635 PF00430 ATP synthase B/B' CF(0) M001_RS21640 PF00137 ATP synthase subunit C M001_RS21645 PF00119 ATP synthase A chain M001_RS21655 PF02195 ParB-like nuclease domain M001_RS21655 PF17762 HTH domain found in ParB protein M001_RS21660 PF13614 AAA domain M001_RS21665 PF02527 rRNA small subunit methyltransferase G M001_RS21670 PF01134 Glucose inhibited division protein A M001_RS21670 PF13932 GidA associated domain M001_RS21675 PF00258 Flavodoxin M001_RS21680 PF00593 TonB dependent receptor M001_RS21680 PF07715 TonB-dependent Receptor Plug Domain M001_RS21685 PF00005 ABC transporter M001_RS21690 PF00005 ABC transporter M001_RS21695 PF01497 Periplasmic binding protein M001_RS21700 PF01032 FecCD transport family M001_RS21705 PF10396 GTP-binding protein TrmE N-terminus M001_RS21705 PF12631 MnmE helical domain M001_RS21705 PF01926 50S ribosome-binding GTPase M001_RS21710 PF02096 60Kd inner membrane protein M001_RS21710 PF14849 YidC periplasmic domain M001_RS21715 PF01809 Putative membrane protein insertion efficiency factor M001_RS21720 PF00825 Ribonuclease P M001_RS21725 PF00468 Ribosomal protein L34 M001_RS21735 PF00528 Binding-protein-dependent transport system inner membrane component M001_RS21740 PF00497 Bacterial extracellular solute-binding proteins, family 3 M001_RS21790 PF04434 SWIM zinc finger M001_RS21790 PF00271 Helicase conserved C-terminal domain M001_RS21790 PF00176 SNF2 family N-terminal domain M001_RS21875 PF00574 Clp protease M001_RS21980 PF02195 ParB-like nuclease domain M001_RS21980 PF18090 Centromere-binding protein HTH domain M001_RS21990 PF13614 AAA domain M001_RS22025 PF09397 Ftsk gamma domain M001_RS22025 PF17854 FtsK alpha domain M001_RS22025 PF01580 FtsK/SpoIIIE family M001_RS22025 PF13491 4TM region of DNA translocase FtsK/SpoIIIE