locus-tag class description CVS41_RS00015 PF03544 Gram-negative bacterial TonB protein C-terminal CVS41_RS00020 PF02472 Biopolymer transport protein ExbD/TolR CVS41_RS00025 PF01618 MotA/TolQ/ExbB proton channel family CVS41_RS00030 PF01618 MotA/TolQ/ExbB proton channel family CVS41_RS00040 PF00196 Bacterial regulatory proteins, luxR family CVS41_RS00040 PF03472 Autoinducer binding domain CVS41_RS00045 PF01380 SIS domain CVS41_RS00050 PF08220 DeoR-like helix-turn-helix domain CVS41_RS00050 PF00455 DeoR C terminal sensor domain CVS41_RS00055 PF00486 Transcriptional regulatory protein, C terminal CVS41_RS00055 PF00072 Response regulator receiver domain CVS41_RS00060 PF00672 HAMP domain CVS41_RS00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS00060 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS00065 PF00905 Penicillin binding protein transpeptidase domain CVS41_RS00075 PF06123 Inner membrane protein CreD CVS41_RS00090 PF13439 Glycosyltransferase Family 4 CVS41_RS00090 PF00534 Glycosyl transferases group 1 CVS41_RS00120 PF02706 Chain length determinant protein CVS41_RS00120 PF13807 G-rich domain on putative tyrosine kinase CVS41_RS00120 PF13614 AAA domain CVS41_RS00135 PF02397 Bacterial sugar transferase CVS41_RS00140 PF00132 Bacterial transferase hexapeptide (six repeats) CVS41_RS00140 PF14602 Hexapeptide repeat of succinyl-transferase CVS41_RS00140 PF12804 MobA-like NTP transferase domain CVS41_RS00145 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CVS41_RS00145 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CVS41_RS00150 PF02874 ATP synthase alpha/beta family, beta-barrel domain CVS41_RS00150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CVS41_RS00155 PF00231 ATP synthase CVS41_RS00160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CVS41_RS00160 PF00306 ATP synthase alpha/beta chain, C terminal domain CVS41_RS00160 PF02874 ATP synthase alpha/beta family, beta-barrel domain CVS41_RS00165 PF00213 ATP synthase delta (OSCP) subunit CVS41_RS00170 PF00430 ATP synthase B/B' CF(0) CVS41_RS00175 PF00137 ATP synthase subunit C CVS41_RS00180 PF00119 ATP synthase A chain CVS41_RS00190 PF17762 HTH domain found in ParB protein CVS41_RS00190 PF02195 ParB-like nuclease domain CVS41_RS00195 PF13614 AAA domain CVS41_RS00200 PF02527 rRNA small subunit methyltransferase G CVS41_RS00205 PF01134 Glucose inhibited division protein A CVS41_RS00205 PF13932 GidA associated domain CVS41_RS00210 PF00258 Flavodoxin CVS41_RS00215 PF00593 TonB dependent receptor CVS41_RS00215 PF07715 TonB-dependent Receptor Plug Domain CVS41_RS00220 PF00005 ABC transporter CVS41_RS00225 PF00005 ABC transporter CVS41_RS00230 PF01497 Periplasmic binding protein CVS41_RS00235 PF01032 FecCD transport family CVS41_RS00240 PF10396 GTP-binding protein TrmE N-terminus CVS41_RS00240 PF12631 MnmE helical domain CVS41_RS00240 PF01926 50S ribosome-binding GTPase CVS41_RS00245 PF14849 YidC periplasmic domain CVS41_RS00245 PF02096 60Kd inner membrane protein CVS41_RS00250 PF01809 Putative membrane protein insertion efficiency factor CVS41_RS00255 PF00825 Ribonuclease P CVS41_RS00260 PF00468 Ribosomal protein L34 CVS41_RS00265 PF00005 ABC transporter CVS41_RS00270 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS00275 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS41_RS00280 PF00308 Bacterial dnaA protein CVS41_RS00280 PF11638 DnaA N-terminal domain CVS41_RS00280 PF08299 Bacterial dnaA protein helix-turn-helix CVS41_RS00285 PF02767 DNA polymerase III beta subunit, central domain CVS41_RS00285 PF02768 DNA polymerase III beta subunit, C-terminal domain CVS41_RS00285 PF00712 DNA polymerase III beta subunit, N-terminal domain CVS41_RS00290 PF02463 RecF/RecN/SMC N terminal domain CVS41_RS00295 PF00204 DNA gyrase B CVS41_RS00295 PF00986 DNA gyrase B subunit, carboxyl terminus CVS41_RS00295 PF18053 DNA gyrase B subunit insert domain CVS41_RS00295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS00295 PF01751 Toprim domain CVS41_RS00310 PF12833 Helix-turn-helix domain CVS41_RS00310 PF01965 DJ-1/PfpI family CVS41_RS00315 PF12706 Beta-lactamase superfamily domain CVS41_RS00320 PF00011 Hsp20/alpha crystallin family CVS41_RS00325 PF00011 Hsp20/alpha crystallin family CVS41_RS00330 PF00155 Aminotransferase class I and II CVS41_RS00345 PF07690 Major Facilitator Superfamily CVS41_RS00350 PF00486 Transcriptional regulatory protein, C terminal CVS41_RS00350 PF00072 Response regulator receiver domain CVS41_RS00355 PF13493 Domain of unknown function (DUF4118) CVS41_RS00355 PF13492 GAF domain CVS41_RS00355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS00355 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS00355 PF02702 Osmosensitive K+ channel His kinase sensor domain CVS41_RS00360 PF02669 K+-transporting ATPase, c chain CVS41_RS00370 PF03814 Potassium-transporting ATPase A subunit CVS41_RS00380 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS41_RS00380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS41_RS00385 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS00385 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS41_RS00385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS00390 PF00873 AcrB/AcrD/AcrF family CVS41_RS00395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS41_RS00400 PF00440 Bacterial regulatory proteins, tetR family CVS41_RS00435 PF12146 Serine aminopeptidase, S33 CVS41_RS00440 PF00132 Bacterial transferase hexapeptide (six repeats) CVS41_RS00445 PF12105 SpoU, rRNA methylase, C-terminal CVS41_RS00445 PF00588 SpoU rRNA Methylase family CVS41_RS00450 PF13291 ACT domain CVS41_RS00450 PF04607 Region found in RelA / SpoT proteins CVS41_RS00450 PF02824 TGS domain CVS41_RS00455 PF01192 RNA polymerase Rpb6 CVS41_RS00460 PF00625 Guanylate kinase CVS41_RS00470 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CVS41_RS00485 PF00892 EamA-like transporter family CVS41_RS00505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS00505 PF03466 LysR substrate binding domain CVS41_RS00510 PF00579 tRNA synthetases class I (W and Y) CVS41_RS00515 PF00582 Universal stress protein family CVS41_RS00525 PF07055 Enoyl reductase FAD binding domain CVS41_RS00525 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CVS41_RS00525 PF12241 Trans-2-enoyl-CoA reductase catalytic region CVS41_RS00530 PF00210 Ferritin-like domain CVS41_RS00540 PF06580 Histidine kinase CVS41_RS00540 PF07694 5TMR of 5TMR-LYT CVS41_RS00540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS00545 PF04397 LytTr DNA-binding domain CVS41_RS00545 PF00072 Response regulator receiver domain CVS41_RS00550 PF07690 Major Facilitator Superfamily CVS41_RS00555 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CVS41_RS00555 PF02222 ATP-grasp domain CVS41_RS00560 PF00731 AIR carboxylase CVS41_RS00575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS00575 PF03466 LysR substrate binding domain CVS41_RS00580 PF00593 TonB dependent receptor CVS41_RS00580 PF07715 TonB-dependent Receptor Plug Domain CVS41_RS00585 PF01177 Asp/Glu/Hydantoin racemase CVS41_RS00615 PF00899 ThiF family CVS41_RS00620 PF02657 Fe-S metabolism associated domain CVS41_RS00625 PF00266 Aminotransferase class-V CVS41_RS00630 PF13361 UvrD-like helicase C-terminal domain CVS41_RS00630 PF00580 UvrD/REP helicase N-terminal domain CVS41_RS00635 PF03707 Bacterial signalling protein N terminal repeat CVS41_RS00635 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS00635 PF00563 EAL domain CVS41_RS00640 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS41_RS00645 PF00107 Zinc-binding dehydrogenase CVS41_RS00645 PF08240 Alcohol dehydrogenase GroES-like domain CVS41_RS00650 PF00155 Aminotransferase class I and II CVS41_RS00655 PF00440 Bacterial regulatory proteins, tetR family CVS41_RS00655 PF08360 QacR-like protein, C-terminal region CVS41_RS00660 PF01370 NAD dependent epimerase/dehydratase family CVS41_RS00665 PF13439 Glycosyltransferase Family 4 CVS41_RS00665 PF00534 Glycosyl transferases group 1 CVS41_RS00675 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) CVS41_RS00700 PF12833 Helix-turn-helix domain CVS41_RS00700 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CVS41_RS00705 PF01810 LysE type translocator CVS41_RS00735 PF14001 YdfZ protein CVS41_RS00755 PF13361 UvrD-like helicase C-terminal domain CVS41_RS00755 PF00580 UvrD/REP helicase N-terminal domain CVS41_RS00760 PF13700 Domain of unknown function (DUF4158) CVS41_RS00760 PF01526 Tn3 transposase DDE domain CVS41_RS00765 PF00239 Resolvase, N terminal domain CVS41_RS00765 PF02796 Helix-turn-helix domain of resolvase CVS41_RS00770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS00770 PF08447 PAS fold CVS41_RS00775 PF02608 ABC transporter substrate-binding protein PnrA-like CVS41_RS00780 PF00005 ABC transporter CVS41_RS00785 PF02653 Branched-chain amino acid transport system / permease component CVS41_RS00790 PF02653 Branched-chain amino acid transport system / permease component CVS41_RS00800 PF00149 Calcineurin-like phosphoesterase CVS41_RS00800 PF02872 5'-nucleotidase, C-terminal domain CVS41_RS00810 PF01769 Divalent cation transporter CVS41_RS00810 PF03448 MgtE intracellular N domain CVS41_RS00810 PF00571 CBS domain CVS41_RS00815 PF14824 Sirohaem biosynthesis protein central CVS41_RS00815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CVS41_RS00815 PF10414 Sirohaem synthase dimerisation region CVS41_RS00820 PF01226 Formate/nitrite transporter CVS41_RS00825 PF13806 Rieske-like [2Fe-2S] domain CVS41_RS00830 PF18267 Rubredoxin NAD+ reductase C-terminal domain CVS41_RS00830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CVS41_RS00830 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS41_RS00830 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CVS41_RS00830 PF04324 BFD-like [2Fe-2S] binding domain CVS41_RS00835 PF07724 AAA domain (Cdc48 subfamily) CVS41_RS00835 PF00004 ATPase family associated with various cellular activities (AAA) CVS41_RS00835 PF10431 C-terminal, D2-small domain, of ClpB protein CVS41_RS00840 PF00227 Proteasome subunit CVS41_RS00850 PF05746 DALR anticodon binding domain CVS41_RS00850 PF00750 tRNA synthetases class I (R) CVS41_RS00850 PF03485 Arginyl tRNA synthetase N terminal domain CVS41_RS00860 PF04545 Sigma-70, region 4 CVS41_RS00860 PF04542 Sigma-70 region 2 CVS41_RS00870 PF02673 Bacitracin resistance protein BacA CVS41_RS00875 PF01263 Aldose 1-epimerase CVS41_RS00880 PF10509 Galactokinase galactose-binding signature CVS41_RS00880 PF08544 GHMP kinases C terminal CVS41_RS00880 PF00288 GHMP kinases N terminal domain CVS41_RS00885 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CVS41_RS00885 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CVS41_RS00890 PF16363 GDP-mannose 4,6 dehydratase CVS41_RS00895 PF00356 Bacterial regulatory proteins, lacI family CVS41_RS00900 PF02837 Glycosyl hydrolases family 2, sugar binding domain CVS41_RS00900 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CVS41_RS00900 PF02929 Beta galactosidase small chain CVS41_RS00900 PF16353 Domain of unknown function(DUF4981) CVS41_RS00900 PF00703 Glycosyl hydrolases family 2 CVS41_RS00905 PF13407 Periplasmic binding protein domain CVS41_RS00910 PF00005 ABC transporter CVS41_RS00915 PF02653 Branched-chain amino acid transport system / permease component CVS41_RS00920 PF00672 HAMP domain CVS41_RS00920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS00920 PF02743 Cache domain CVS41_RS00925 PF05958 tRNA (Uracil-5-)-methyltransferase CVS41_RS00940 PF02903 Alpha amylase, N-terminal ig-like domain CVS41_RS00940 PF00128 Alpha amylase, catalytic domain CVS41_RS00955 PF00012 Hsp70 protein CVS41_RS00960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS41_RS00960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS41_RS00965 PF05981 CreA protein CVS41_RS00980 PF01258 Prokaryotic dksA/traR C4-type zinc finger CVS41_RS00985 PF00120 Glutamine synthetase, catalytic domain CVS41_RS00990 PF00202 Aminotransferase class-III CVS41_RS00995 PF13416 Bacterial extracellular solute-binding protein CVS41_RS01000 PF13416 Bacterial extracellular solute-binding protein CVS41_RS01005 PF00005 ABC transporter CVS41_RS01005 PF08402 TOBE domain CVS41_RS01010 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS01015 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS01020 PF03473 MOSC domain CVS41_RS01020 PF03475 3-alpha domain CVS41_RS01035 PF03061 Thioesterase superfamily CVS41_RS01040 PF00271 Helicase conserved C-terminal domain CVS41_RS01040 PF09382 RQC domain CVS41_RS01040 PF00570 HRDC domain CVS41_RS01040 PF16124 RecQ zinc-binding CVS41_RS01040 PF00270 DEAD/DEAH box helicase CVS41_RS01045 PF00034 Cytochrome c CVS41_RS01050 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CVS41_RS01060 PF02592 Putative vitamin uptake transporter CVS41_RS01065 PF03737 Aldolase/RraA CVS41_RS01070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS01070 PF00672 HAMP domain CVS41_RS01080 PF01197 Ribosomal protein L31 CVS41_RS01085 PF00271 Helicase conserved C-terminal domain CVS41_RS01085 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CVS41_RS01085 PF17764 3′ DNA-binding domain (3′BD) CVS41_RS01085 PF18074 Primosomal protein N C-terminal domain CVS41_RS01085 PF00270 DEAD/DEAH box helicase CVS41_RS01095 PF11066 Protein of unknown function (DUF2867) CVS41_RS01095 PF13460 NAD(P)H-binding CVS41_RS01100 PF03222 Tryptophan/tyrosine permease family CVS41_RS01105 PF00390 Malic enzyme, N-terminal domain CVS41_RS01105 PF03949 Malic enzyme, NAD binding domain CVS41_RS01110 PF03631 Virulence factor BrkB CVS41_RS01115 PF02580 D-Tyr-tRNA(Tyr) deacylase CVS41_RS01120 PF17284 Spermidine synthase tetramerisation domain CVS41_RS01125 PF09500 Putative thioesterase (yiiD_Cterm) CVS41_RS01125 PF00583 Acetyltransferase (GNAT) family CVS41_RS01135 PF00271 Helicase conserved C-terminal domain CVS41_RS01135 PF17191 RecG wedge domain CVS41_RS01135 PF00270 DEAD/DEAH box helicase CVS41_RS01140 PF13091 PLD-like domain CVS41_RS01145 PF02447 GntP family permease CVS41_RS01150 PF01202 Shikimate kinase CVS41_RS01155 PF00920 Dehydratase family CVS41_RS01160 PF01081 KDPG and KHG aldolase CVS41_RS01165 PF00356 Bacterial regulatory proteins, lacI family CVS41_RS01165 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CVS41_RS01175 PF01551 Peptidase family M23 CVS41_RS01180 PF01676 Metalloenzyme superfamily CVS41_RS01180 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CVS41_RS01185 PF00581 Rhodanese-like domain CVS41_RS01190 PF02556 Preprotein translocase subunit SecB CVS41_RS01195 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CVS41_RS01195 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CVS41_RS01200 PF01106 NifU-like domain CVS41_RS01200 PF01521 Iron-sulphur cluster biosynthesis CVS41_RS01205 PF00156 Phosphoribosyl transferase domain CVS41_RS01210 PF00561 alpha/beta hydrolase fold CVS41_RS01230 PF00575 S1 RNA binding domain CVS41_RS01230 PF16921 Tex protein YqgF-like domain CVS41_RS01230 PF09371 Tex-like protein N-terminal domain CVS41_RS01230 PF17674 HHH domain CVS41_RS01235 PF03449 Transcription elongation factor, N-terminal CVS41_RS01235 PF01272 Transcription elongation factor, GreA/GreB, C-term CVS41_RS01240 PF00072 Response regulator receiver domain CVS41_RS01240 PF00486 Transcriptional regulatory protein, C terminal CVS41_RS01245 PF00672 HAMP domain CVS41_RS01245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS01245 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS01255 PF00338 Ribosomal protein S10p/S20e CVS41_RS01260 PF00297 Ribosomal protein L3 CVS41_RS01265 PF00573 Ribosomal protein L4/L1 family CVS41_RS01270 PF00276 Ribosomal protein L23 CVS41_RS01275 PF03947 Ribosomal Proteins L2, C-terminal domain CVS41_RS01275 PF00181 Ribosomal Proteins L2, RNA binding domain CVS41_RS01280 PF00203 Ribosomal protein S19 CVS41_RS01285 PF00237 Ribosomal protein L22p/L17e CVS41_RS01290 PF00189 Ribosomal protein S3, C-terminal domain CVS41_RS01290 PF07650 KH domain CVS41_RS01295 PF00252 Ribosomal protein L16p/L10e CVS41_RS01300 PF00831 Ribosomal L29 protein CVS41_RS01305 PF00366 Ribosomal protein S17 CVS41_RS01310 PF00238 Ribosomal protein L14p/L23e CVS41_RS01315 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CVS41_RS01315 PF00467 KOW motif CVS41_RS01320 PF00281 Ribosomal protein L5 CVS41_RS01320 PF00673 ribosomal L5P family C-terminus CVS41_RS01325 PF00253 Ribosomal protein S14p/S29e CVS41_RS01330 PF00410 Ribosomal protein S8 CVS41_RS01335 PF00347 Ribosomal protein L6 CVS41_RS01340 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CVS41_RS01345 PF00333 Ribosomal protein S5, N-terminal domain CVS41_RS01345 PF03719 Ribosomal protein S5, C-terminal domain CVS41_RS01350 PF00327 Ribosomal protein L30p/L7e CVS41_RS01355 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CVS41_RS01360 PF00344 SecY translocase CVS41_RS01365 PF00444 Ribosomal protein L36 CVS41_RS01370 PF00416 Ribosomal protein S13/S18 CVS41_RS01375 PF00411 Ribosomal protein S11 CVS41_RS01380 PF00163 Ribosomal protein S4/S9 N-terminal domain CVS41_RS01380 PF01479 S4 domain CVS41_RS01385 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CVS41_RS01385 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CVS41_RS01385 PF01000 RNA polymerase Rpb3/RpoA insert domain CVS41_RS01390 PF01196 Ribosomal protein L17 CVS41_RS01400 PF01695 IstB-like ATP binding protein CVS41_RS01405 PF00665 Integrase core domain CVS41_RS01405 PF02796 Helix-turn-helix domain of resolvase CVS41_RS01435 PF00593 TonB dependent receptor CVS41_RS01435 PF07715 TonB-dependent Receptor Plug Domain CVS41_RS01440 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS01440 PF17151 Periplasmic sensor domain CVS41_RS01445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS01445 PF00672 HAMP domain CVS41_RS01445 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS01450 PF00486 Transcriptional regulatory protein, C terminal CVS41_RS01450 PF00072 Response regulator receiver domain CVS41_RS01465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS01465 PF03466 LysR substrate binding domain CVS41_RS01475 PF02678 Pirin CVS41_RS01475 PF17954 Quercetinase C-terminal cupin domain CVS41_RS01480 PF07681 DoxX CVS41_RS01485 PF17946 RecC C-terminal domain CVS41_RS01490 PF12705 PD-(D/E)XK nuclease superfamily CVS41_RS01490 PF00580 UvrD/REP helicase N-terminal domain CVS41_RS01490 PF13361 UvrD-like helicase C-terminal domain CVS41_RS01495 PF13538 UvrD-like helicase C-terminal domain CVS41_RS01510 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS01525 PF07702 UTRA domain CVS41_RS01525 PF00392 Bacterial regulatory proteins, gntR family CVS41_RS01540 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS01550 PF00005 ABC transporter CVS41_RS01550 PF08402 TOBE domain CVS41_RS01560 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS01580 PF01053 Cys/Met metabolism PLP-dependent enzyme CVS41_RS01590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS41_RS01590 PF12793 Sugar transport-related sRNA regulator N-term CVS41_RS01595 PF00141 Peroxidase CVS41_RS01610 PF03280 Proteobacterial lipase chaperone protein CVS41_RS01615 PF00561 alpha/beta hydrolase fold CVS41_RS01620 PF00579 tRNA synthetases class I (W and Y) CVS41_RS01620 PF01479 S4 domain CVS41_RS01625 PF00196 Bacterial regulatory proteins, luxR family CVS41_RS01645 PF00199 Catalase CVS41_RS01645 PF06628 Catalase-related immune-responsive CVS41_RS01650 PF00583 Acetyltransferase (GNAT) family CVS41_RS01670 PF08264 Anticodon-binding domain of tRNA CVS41_RS01670 PF10458 Valyl tRNA synthetase tRNA binding arm CVS41_RS01670 PF00133 tRNA synthetases class I (I, L, M and V) CVS41_RS01675 PF04364 DNA polymerase III chi subunit, HolC CVS41_RS01680 PF02789 Cytosol aminopeptidase family, N-terminal domain CVS41_RS01680 PF00883 Cytosol aminopeptidase family, catalytic domain CVS41_RS01685 PF03739 Lipopolysaccharide export system permease LptF/LptG CVS41_RS01690 PF03739 Lipopolysaccharide export system permease LptF/LptG CVS41_RS01705 PF00589 Phage integrase family CVS41_RS01750 PF00665 Integrase core domain CVS41_RS01755 PF01695 IstB-like ATP binding protein CVS41_RS01795 PF12833 Helix-turn-helix domain CVS41_RS01795 PF02311 AraC-like ligand binding domain CVS41_RS01800 PF02653 Branched-chain amino acid transport system / permease component CVS41_RS01805 PF00005 ABC transporter CVS41_RS01810 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CVS41_RS01815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CVS41_RS01820 PF00596 Class II Aldolase and Adducin N-terminal domain CVS41_RS01825 PF11762 L-arabinose isomerase C-terminal domain CVS41_RS01825 PF02610 L-arabinose isomerase CVS41_RS01830 PF00923 Transaldolase/Fructose-6-phosphate aldolase CVS41_RS01835 PF02779 Transketolase, pyrimidine binding domain CVS41_RS01835 PF02780 Transketolase, C-terminal domain CVS41_RS01835 PF00456 Transketolase, thiamine diphosphate binding domain CVS41_RS01850 PF01263 Aldose 1-epimerase CVS41_RS01860 PF07715 TonB-dependent Receptor Plug Domain CVS41_RS01860 PF00593 TonB dependent receptor CVS41_RS01870 PF00768 D-alanyl-D-alanine carboxypeptidase CVS41_RS01875 PF13520 Amino acid permease CVS41_RS01895 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CVS41_RS01910 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CVS41_RS01915 PF02602 Uroporphyrinogen-III synthase HemD CVS41_RS01920 PF03900 Porphobilinogen deaminase, C-terminal domain CVS41_RS01920 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CVS41_RS01925 PF01295 Adenylate cyclase, class-I CVS41_RS01925 PF12633 Adenylate cyclase NT domain CVS41_RS01930 PF02230 Phospholipase/Carboxylesterase CVS41_RS01935 PF01491 Frataxin-like domain CVS41_RS01945 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CVS41_RS01945 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CVS41_RS01950 PF01678 Diaminopimelate epimerase CVS41_RS01960 PF00589 Phage integrase family CVS41_RS01960 PF02899 Phage integrase, N-terminal SAM-like domain CVS41_RS01965 PF13419 Haloacid dehalogenase-like hydrolase CVS41_RS01975 PF13545 Crp-like helix-turn-helix domain CVS41_RS01975 PF00027 Cyclic nucleotide-binding domain CVS41_RS01985 PF07722 Peptidase C26 CVS41_RS01990 PF04751 Protein of unknown function (DUF615) CVS41_RS01995 PF01523 Putative modulator of DNA gyrase CVS41_RS02000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CVS41_RS02005 PF01722 BolA-like protein CVS41_RS02015 PF05494 MlaC protein CVS41_RS02020 PF02470 MlaD protein CVS41_RS02025 PF02405 Permease MlaE CVS41_RS02030 PF00005 ABC transporter CVS41_RS02035 PF01380 SIS domain CVS41_RS02035 PF00571 CBS domain CVS41_RS02045 PF06835 Lipopolysaccharide-assembly, LptC-related CVS41_RS02050 PF03968 OstA-like protein CVS41_RS02055 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS41_RS02055 PF00005 ABC transporter CVS41_RS02060 PF04552 Sigma-54, DNA binding domain CVS41_RS02060 PF00309 Sigma-54 factor, Activator interacting domain (AID) CVS41_RS02060 PF04963 Sigma-54 factor, core binding domain CVS41_RS02065 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CVS41_RS02070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CVS41_RS02075 PF03668 P-loop ATPase protein family CVS41_RS02080 PF00381 PTS HPr component phosphorylation site CVS41_RS02085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CVS41_RS02085 PF00874 PRD domain CVS41_RS02085 PF05043 Mga helix-turn-helix domain CVS41_RS02085 PF08279 HTH domain CVS41_RS02090 PF07071 KDGP aldolase CVS41_RS02095 PF03841 L-seryl-tRNA selenium transferase CVS41_RS02100 PF01979 Amidohydrolase family CVS41_RS02130 PF13180 PDZ domain CVS41_RS02135 PF13180 PDZ domain CVS41_RS02135 PF00595 PDZ domain CVS41_RS02145 PF03969 AFG1-like ATPase CVS41_RS02150 PF00572 Ribosomal protein L13 CVS41_RS02155 PF00380 Ribosomal protein S9/S16 CVS41_RS02160 PF00355 Rieske [2Fe-2S] domain CVS41_RS02160 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CVS41_RS02165 PF00032 Cytochrome b(C-terminal)/b6/petD CVS41_RS02165 PF00033 Cytochrome b/b6/petB CVS41_RS02170 PF02167 Cytochrome C1 family CVS41_RS02175 PF02798 Glutathione S-transferase, N-terminal domain CVS41_RS02175 PF00043 Glutathione S-transferase, C-terminal domain CVS41_RS02180 PF04386 Stringent starvation protein B CVS41_RS02185 PF04972 BON domain CVS41_RS02190 PF13580 SIS domain CVS41_RS02195 PF02021 Uncharacterised protein family UPF0102 CVS41_RS02200 PF04348 LppC putative lipoprotein CVS41_RS02205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CVS41_RS02215 PF02381 MraZ protein, putative antitoxin-like CVS41_RS02220 PF01795 MraW methylase family CVS41_RS02225 PF04999 Cell division protein FtsL CVS41_RS02230 PF00905 Penicillin binding protein transpeptidase domain CVS41_RS02230 PF03717 Penicillin-binding Protein dimerisation domain CVS41_RS02235 PF08245 Mur ligase middle domain CVS41_RS02235 PF01225 Mur ligase family, catalytic domain CVS41_RS02235 PF02875 Mur ligase family, glutamate ligase domain CVS41_RS02240 PF01225 Mur ligase family, catalytic domain CVS41_RS02240 PF02875 Mur ligase family, glutamate ligase domain CVS41_RS02240 PF08245 Mur ligase middle domain CVS41_RS02245 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CVS41_RS02245 PF00953 Glycosyl transferase family 4 CVS41_RS02250 PF02875 Mur ligase family, glutamate ligase domain CVS41_RS02250 PF08245 Mur ligase middle domain CVS41_RS02255 PF01098 Cell cycle protein CVS41_RS02260 PF03033 Glycosyltransferase family 28 N-terminal domain CVS41_RS02260 PF04101 Glycosyltransferase family 28 C-terminal domain CVS41_RS02265 PF02875 Mur ligase family, glutamate ligase domain CVS41_RS02265 PF01225 Mur ligase family, catalytic domain CVS41_RS02265 PF08245 Mur ligase middle domain CVS41_RS02270 PF08478 POTRA domain, FtsQ-type CVS41_RS02270 PF03799 Cell division protein FtsQ CVS41_RS02275 PF02491 SHS2 domain inserted in FTSA CVS41_RS02280 PF00091 Tubulin/FtsZ family, GTPase domain CVS41_RS02280 PF12327 FtsZ family, C-terminal domain CVS41_RS02285 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CVS41_RS02295 PF01043 SecA preprotein cross-linking domain CVS41_RS02295 PF07516 SecA Wing and Scaffold domain CVS41_RS02295 PF02810 SEC-C motif CVS41_RS02295 PF07517 SecA DEAD-like domain CVS41_RS02300 PF00293 NUDIX domain CVS41_RS02305 PF03884 DNA gyrase inhibitor YacG CVS41_RS02310 PF07072 Cell division protein CVS41_RS02315 PF01121 Dephospho-CoA kinase CVS41_RS02320 PF06750 Bacterial Peptidase A24 N-terminal domain CVS41_RS02320 PF01478 Type IV leader peptidase family CVS41_RS02325 PF00482 Type II secretion system (T2SS), protein F CVS41_RS02330 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CVS41_RS02330 PF00437 Type II/IV secretion system protein CVS41_RS02335 PF07963 Prokaryotic N-terminal methylation motif CVS41_RS02345 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CVS41_RS02345 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CVS41_RS02355 PF01510 N-acetylmuramoyl-L-alanine amidase CVS41_RS02360 PF07729 FCD domain CVS41_RS02360 PF00392 Bacterial regulatory proteins, gntR family CVS41_RS02365 PF17831 Pyruvate dehydrogenase E1 component middle domain CVS41_RS02365 PF00456 Transketolase, thiamine diphosphate binding domain CVS41_RS02370 PF02817 e3 binding domain CVS41_RS02370 PF00364 Biotin-requiring enzyme CVS41_RS02370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CVS41_RS02375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS41_RS02375 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS41_RS02380 PF00563 EAL domain CVS41_RS02380 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS02380 PF03707 Bacterial signalling protein N terminal repeat CVS41_RS02385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS02385 PF12729 Four helix bundle sensory module for signal transduction CVS41_RS02385 PF00672 HAMP domain CVS41_RS02390 PF01734 Patatin-like phospholipase CVS41_RS02395 PF06434 Aconitate hydratase 2 N-terminus CVS41_RS02395 PF11791 Aconitate B N-terminal domain CVS41_RS02395 PF00330 Aconitase family (aconitate hydratase) CVS41_RS02400 PF00563 EAL domain CVS41_RS02400 PF12792 CSS motif domain associated with EAL CVS41_RS02410 PF02492 CobW/HypB/UreG, nucleotide-binding domain CVS41_RS02410 PF07683 Cobalamin synthesis protein cobW C-terminal domain CVS41_RS02415 PF00873 AcrB/AcrD/AcrF family CVS41_RS02430 PF07690 Major Facilitator Superfamily CVS41_RS02440 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CVS41_RS02445 PF02152 Dihydroneopterin aldolase CVS41_RS02450 PF02660 Glycerol-3-phosphate acyltransferase CVS41_RS02475 PF07670 Nucleoside recognition CVS41_RS02495 PF14698 Argininosuccinate lyase C-terminal CVS41_RS02495 PF00206 Lyase CVS41_RS02500 PF00764 Arginosuccinate synthase CVS41_RS02505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CVS41_RS02505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CVS41_RS02510 PF00696 Amino acid kinase family CVS41_RS02515 PF01118 Semialdehyde dehydrogenase, NAD binding domain CVS41_RS02515 PF02774 Semialdehyde dehydrogenase, dimerisation domain CVS41_RS02520 PF01546 Peptidase family M20/M25/M40 CVS41_RS02520 PF07687 Peptidase dimerisation domain CVS41_RS02525 PF00311 Phosphoenolpyruvate carboxylase CVS41_RS02540 PF17151 Periplasmic sensor domain CVS41_RS02540 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS02550 PF06055 Exopolysaccharide synthesis, ExoD CVS41_RS02560 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS02565 PF00909 Ammonium Transporter Family CVS41_RS02570 PF05433 Glycine zipper 2TM domain CVS41_RS02575 PF00583 Acetyltransferase (GNAT) family CVS41_RS02580 PF11756 Nitrous oxide-stimulated promoter CVS41_RS02585 PF00557 Metallopeptidase family M24 CVS41_RS02585 PF01321 Creatinase/Prolidase N-terminal domain CVS41_RS02590 PF00392 Bacterial regulatory proteins, gntR family CVS41_RS02595 PF01293 Phosphoenolpyruvate carboxykinase CVS41_RS02600 PF01430 Hsp33 protein CVS41_RS02605 PF01479 S4 domain CVS41_RS02615 PF01569 PAP2 superfamily CVS41_RS02620 PF01594 AI-2E family transporter CVS41_RS02625 PF00313 'Cold-shock' DNA-binding domain CVS41_RS02635 PF02954 Bacterial regulatory protein, Fis family CVS41_RS02635 PF00989 PAS fold CVS41_RS02635 PF00158 Sigma-54 interaction domain CVS41_RS02640 PF00465 Iron-containing alcohol dehydrogenase CVS41_RS02645 PF03610 PTS system fructose IIA component CVS41_RS02645 PF05524 PEP-utilising enzyme, N-terminal CVS41_RS02645 PF00391 PEP-utilising enzyme, mobile domain CVS41_RS02645 PF00381 PTS HPr component phosphorylation site CVS41_RS02650 PF02734 DAK2 domain CVS41_RS02655 PF02733 Dak1 domain CVS41_RS02660 PF00860 Permease family CVS41_RS02665 PF00313 'Cold-shock' DNA-binding domain CVS41_RS02675 PF01545 Cation efflux family CVS41_RS02675 PF16916 Dimerisation domain of Zinc Transporter CVS41_RS02690 PF00436 Single-strand binding protein family CVS41_RS02695 PF00196 Bacterial regulatory proteins, luxR family CVS41_RS02700 PF10627 Curli assembly protein CsgE CVS41_RS02710 PF03783 Curli production assembly/transport component CsgG CVS41_RS02730 PF17760 UvrA interaction domain CVS41_RS02730 PF00005 ABC transporter CVS41_RS02730 PF17755 UvrA DNA-binding domain CVS41_RS02735 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS02735 PF08448 PAS fold CVS41_RS02740 PF03922 OmpW family CVS41_RS02745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS02745 PF00672 HAMP domain CVS41_RS02760 PF02219 Methylenetetrahydrofolate reductase CVS41_RS02775 PF01381 Helix-turn-helix CVS41_RS02775 PF07883 Cupin domain CVS41_RS02815 PF04363 Protein of unknown function (DUF496) CVS41_RS02835 PF00994 Probable molybdopterin binding domain CVS41_RS02835 PF02464 Competence-damaged protein CVS41_RS02845 PF04204 Homoserine O-succinyltransferase CVS41_RS02855 PF01037 Lrp/AsnC ligand binding domain CVS41_RS02860 PF00884 Sulfatase CVS41_RS02875 PF02903 Alpha amylase, N-terminal ig-like domain CVS41_RS02875 PF16657 Maltogenic Amylase, C-terminal domain CVS41_RS02875 PF00128 Alpha amylase, catalytic domain CVS41_RS02895 PF00106 short chain dehydrogenase CVS41_RS02900 PF03577 Peptidase family C69 CVS41_RS02910 PF00465 Iron-containing alcohol dehydrogenase CVS41_RS02915 PF02142 MGS-like domain CVS41_RS02920 PF00210 Ferritin-like domain CVS41_RS02935 PF05127 Helicase CVS41_RS02935 PF08351 Domain of unknown function (DUF1726) CVS41_RS02935 PF17176 tRNA-binding domain CVS41_RS02935 PF13718 GNAT acetyltransferase 2 CVS41_RS02940 PF00106 short chain dehydrogenase CVS41_RS02945 PF01584 CheW-like domain CVS41_RS02945 PF00072 Response regulator receiver domain CVS41_RS02955 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CVS41_RS02955 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CVS41_RS02960 PF02698 DUF218 domain CVS41_RS02965 PF08453 Peptidase family M9 N-terminal CVS41_RS02965 PF01752 Collagenase CVS41_RS02970 PF00501 AMP-binding enzyme CVS41_RS02975 PF13378 Enolase C-terminal domain-like CVS41_RS02980 PF00378 Enoyl-CoA hydratase/isomerase CVS41_RS02985 PF12697 Alpha/beta hydrolase family CVS41_RS02990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS41_RS02990 PF16582 Middle domain of thiamine pyrophosphate CVS41_RS02990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS41_RS02995 PF00425 chorismate binding enzyme CVS41_RS03000 PF01040 UbiA prenyltransferase family CVS41_RS03020 PF00271 Helicase conserved C-terminal domain CVS41_RS03020 PF03880 DbpA RNA binding domain CVS41_RS03020 PF00270 DEAD/DEAH box helicase CVS41_RS03025 PF07662 Na+ dependent nucleoside transporter C-terminus CVS41_RS03025 PF01773 Na+ dependent nucleoside transporter N-terminus CVS41_RS03025 PF07670 Nucleoside recognition CVS41_RS03030 PF04307 LexA-binding, inner membrane-associated putative hydrolase CVS41_RS03035 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CVS41_RS03040 PF01544 CorA-like Mg2+ transporter protein CVS41_RS03055 PF01556 DnaJ C terminal domain CVS41_RS03055 PF00684 DnaJ central domain CVS41_RS03055 PF00226 DnaJ domain CVS41_RS03065 PF05068 Mannitol repressor CVS41_RS03070 PF08125 Mannitol dehydrogenase C-terminal domain CVS41_RS03070 PF01232 Mannitol dehydrogenase Rossmann domain CVS41_RS03075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CVS41_RS03075 PF02378 Phosphotransferase system, EIIC CVS41_RS03075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CVS41_RS03080 PF03279 Bacterial lipid A biosynthesis acyltransferase CVS41_RS03085 PF00294 pfkB family carbohydrate kinase CVS41_RS03085 PF01467 Cytidylyltransferase-like CVS41_RS03090 PF02321 Outer membrane efflux protein CVS41_RS03095 PF00293 NUDIX domain CVS41_RS03100 PF06853 Protein of unknown function (DUF1249) CVS41_RS03105 PF00149 Calcineurin-like phosphoesterase CVS41_RS03110 PF05728 Uncharacterised protein family (UPF0227) CVS41_RS03115 PF00204 DNA gyrase B CVS41_RS03115 PF01751 Toprim domain CVS41_RS03115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS03115 PF00986 DNA gyrase B subunit, carboxyl terminus CVS41_RS03120 PF03989 DNA gyrase C-terminal domain, beta-propeller CVS41_RS03120 PF00521 DNA gyrase/topoisomerase IV, subunit A CVS41_RS03130 PF00854 POT family CVS41_RS03150 PF01556 DnaJ C terminal domain CVS41_RS03150 PF00684 DnaJ central domain CVS41_RS03150 PF00226 DnaJ domain CVS41_RS03160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CVS41_RS03160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CVS41_RS03165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS03165 PF03466 LysR substrate binding domain CVS41_RS03170 PF00578 AhpC/TSA family CVS41_RS03190 PF01553 Acyltransferase CVS41_RS03195 PF04012 PspA/IM30 family CVS41_RS03210 PF01541 GIY-YIG catalytic domain CVS41_RS03220 PF00892 EamA-like transporter family CVS41_RS03225 PF03167 Uracil DNA glycosylase superfamily CVS41_RS03230 PF00892 EamA-like transporter family CVS41_RS03235 PF03466 LysR substrate binding domain CVS41_RS03235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS03240 PF00950 ABC 3 transport family CVS41_RS03245 PF00005 ABC transporter CVS41_RS03250 PF01297 Zinc-uptake complex component A periplasmic CVS41_RS03270 PF01476 LysM domain CVS41_RS03270 PF08525 Opacity-associated protein A N-terminal motif CVS41_RS03270 PF01551 Peptidase family M23 CVS41_RS03275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS41_RS03280 PF04222 Protein of unknown function (DUF416) CVS41_RS03295 PF02028 BCCT, betaine/carnitine/choline family transporter CVS41_RS03300 PF01743 Poly A polymerase head domain CVS41_RS03300 PF01966 HD domain CVS41_RS03300 PF12627 Probable RNA and SrmB- binding site of polymerase A CVS41_RS03305 PF00633 Helix-hairpin-helix motif CVS41_RS03305 PF10576 Iron-sulfur binding domain of endonuclease III CVS41_RS03305 PF14815 NUDIX domain CVS41_RS03305 PF00730 HhH-GPD superfamily base excision DNA repair protein CVS41_RS03310 PF04362 Bacterial Fe(2+) trafficking CVS41_RS03315 PF01464 Transglycosylase SLT domain CVS41_RS03315 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CVS41_RS03320 PF04076 Bacterial OB fold (BOF) protein CVS41_RS03325 PF00657 GDSL-like Lipase/Acylhydrolase CVS41_RS03330 PF01389 OmpA-like transmembrane domain CVS41_RS03330 PF00691 OmpA family CVS41_RS03335 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS03340 PF17876 Cold shock domain CVS41_RS03340 PF08206 Ribonuclease B OB domain CVS41_RS03340 PF00773 RNB domain CVS41_RS03340 PF00575 S1 RNA binding domain CVS41_RS03340 PF08461 Ribonuclease R winged-helix domain CVS41_RS03345 PF08032 RNA 2'-O ribose methyltransferase substrate binding CVS41_RS03345 PF00588 SpoU rRNA Methylase family CVS41_RS03355 PF13673 Acetyltransferase (GNAT) domain CVS41_RS03360 PF00271 Helicase conserved C-terminal domain CVS41_RS03360 PF00270 DEAD/DEAH box helicase CVS41_RS03365 PF05175 Methyltransferase small domain CVS41_RS03370 PF05525 Branched-chain amino acid transport protein CVS41_RS03375 PF05525 Branched-chain amino acid transport protein CVS41_RS03390 PF01475 Ferric uptake regulator family CVS41_RS03395 PF01207 Dihydrouridine synthase (Dus) CVS41_RS03400 PF08447 PAS fold CVS41_RS03400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS03410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS41_RS03425 PF10952 Protein of unknown function (DUF2753) CVS41_RS03430 PF00378 Enoyl-CoA hydratase/isomerase CVS41_RS03445 PF00106 short chain dehydrogenase CVS41_RS03450 PF04073 Aminoacyl-tRNA editing domain CVS41_RS03450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CVS41_RS03450 PF03129 Anticodon binding domain CVS41_RS03455 PF01938 TRAM domain CVS41_RS03455 PF05958 tRNA (Uracil-5-)-methyltransferase CVS41_RS03465 PF02470 MlaD protein CVS41_RS03470 PF04403 Paraquat-inducible protein A CVS41_RS03475 PF17209 Hfq protein CVS41_RS03480 PF13419 Haloacid dehalogenase-like hydrolase CVS41_RS03490 PF01590 GAF domain CVS41_RS03490 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS03490 PF00360 Phytochrome region CVS41_RS03490 PF00563 EAL domain CVS41_RS03495 PF08206 Ribonuclease B OB domain CVS41_RS03495 PF17876 Cold shock domain CVS41_RS03495 PF00773 RNB domain CVS41_RS03500 PF03466 LysR substrate binding domain CVS41_RS03500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS03505 PF00765 Autoinducer synthase CVS41_RS03510 PF03472 Autoinducer binding domain CVS41_RS03510 PF00196 Bacterial regulatory proteins, luxR family CVS41_RS03515 PF01810 LysE type translocator CVS41_RS03520 PF00672 HAMP domain CVS41_RS03520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS03525 PF07499 RuvA, C-terminal domain CVS41_RS03525 PF01330 RuvA N terminal domain CVS41_RS03530 PF05496 Holliday junction DNA helicase RuvB P-loop domain CVS41_RS03530 PF05491 RuvB C-terminal winged helix domain CVS41_RS03530 PF17864 RuvB AAA lid domain CVS41_RS03535 PF01654 Cytochrome bd terminal oxidase subunit I CVS41_RS03540 PF02322 Cytochrome bd terminal oxidase subunit II CVS41_RS03545 PF08173 Membrane bound YbgT-like protein CVS41_RS03550 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CVS41_RS03555 PF03061 Thioesterase superfamily CVS41_RS03560 PF01618 MotA/TolQ/ExbB proton channel family CVS41_RS03565 PF02472 Biopolymer transport protein ExbD/TolR CVS41_RS03575 PF07676 WD40-like Beta Propeller Repeat CVS41_RS03575 PF04052 TolB amino-terminal domain CVS41_RS03580 PF00691 OmpA family CVS41_RS03585 PF13174 Tetratricopeptide repeat CVS41_RS03585 PF16331 TolA binding protein trimerisation CVS41_RS03630 PF00209 Sodium:neurotransmitter symporter family CVS41_RS03640 PF00209 Sodium:neurotransmitter symporter family CVS41_RS03660 PF07690 Major Facilitator Superfamily CVS41_RS03670 PF01037 Lrp/AsnC ligand binding domain CVS41_RS03685 PF00293 NUDIX domain CVS41_RS03695 PF01641 SelR domain CVS41_RS03700 PF00128 Alpha amylase, catalytic domain CVS41_RS03700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CVS41_RS03705 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CVS41_RS03705 PF02806 Alpha amylase, C-terminal all-beta domain CVS41_RS03705 PF00128 Alpha amylase, catalytic domain CVS41_RS03710 PF02446 4-alpha-glucanotransferase CVS41_RS03720 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CVS41_RS03720 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CVS41_RS03725 PF01263 Aldose 1-epimerase CVS41_RS03730 PF02445 Quinolinate synthetase A protein CVS41_RS03735 PF00672 HAMP domain CVS41_RS03735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS03740 PF01957 NfeD-like C-terminal, partner-binding CVS41_RS03745 PF16200 C-terminal region of band_7 CVS41_RS03745 PF01145 SPFH domain / Band 7 family CVS41_RS03750 PF14824 Sirohaem biosynthesis protein central CVS41_RS03750 PF10414 Sirohaem synthase dimerisation region CVS41_RS03750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CVS41_RS03755 PF01507 Phosphoadenosine phosphosulfate reductase family CVS41_RS03760 PF00009 Elongation factor Tu GTP binding domain CVS41_RS03765 PF03600 Citrate transporter CVS41_RS03765 PF02080 TrkA-C domain CVS41_RS03780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS03780 PF08447 PAS fold CVS41_RS03800 PF00005 ABC transporter CVS41_RS03815 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CVS41_RS03830 PF00719 Inorganic pyrophosphatase CVS41_RS03835 PF11849 Domain of unknown function (DUF3369) CVS41_RS03845 PF00893 Small Multidrug Resistance protein CVS41_RS03850 PF00893 Small Multidrug Resistance protein CVS41_RS03855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS41_RS03860 PF00912 Transglycosylase CVS41_RS03860 PF00905 Penicillin binding protein transpeptidase domain CVS41_RS03860 PF14814 Bifunctional transglycosylase second domain CVS41_RS03865 PF00270 DEAD/DEAH box helicase CVS41_RS03865 PF04408 Helicase associated domain (HA2) CVS41_RS03865 PF00271 Helicase conserved C-terminal domain CVS41_RS03865 PF08482 ATP-dependent helicase C-terminal CVS41_RS03875 PF17746 SfsA N-terminal OB domain CVS41_RS03875 PF03749 Sugar fermentation stimulation protein RE domain CVS41_RS03880 PF01258 Prokaryotic dksA/traR C4-type zinc finger CVS41_RS03885 PF00749 tRNA synthetases class I (E and Q), catalytic domain CVS41_RS03890 PF01743 Poly A polymerase head domain CVS41_RS03890 PF12626 Polymerase A arginine-rich C-terminus CVS41_RS03890 PF12627 Probable RNA and SrmB- binding site of polymerase A CVS41_RS03895 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CVS41_RS03900 PF02548 Ketopantoate hydroxymethyltransferase CVS41_RS03905 PF02569 Pantoate-beta-alanine ligase CVS41_RS03915 PF00375 Sodium:dicarboxylate symporter family CVS41_RS03935 PF01869 BadF/BadG/BcrA/BcrD ATPase family CVS41_RS03940 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CVS41_RS03945 PF01061 ABC-2 type transporter CVS41_RS03950 PF00005 ABC transporter CVS41_RS03955 PF00156 Phosphoribosyl transferase domain CVS41_RS03960 PF00440 Bacterial regulatory proteins, tetR family CVS41_RS03965 PF02441 Flavoprotein CVS41_RS03970 PF01225 Mur ligase family, catalytic domain CVS41_RS03970 PF08245 Mur ligase middle domain CVS41_RS03970 PF02875 Mur ligase family, glutamate ligase domain CVS41_RS03975 PF01569 PAP2 superfamily CVS41_RS03980 PF01370 NAD dependent epimerase/dehydratase family CVS41_RS03985 PF00970 Oxidoreductase FAD-binding domain CVS41_RS03985 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS41_RS03985 PF00175 Oxidoreductase NAD-binding domain CVS41_RS03990 PF03063 Prismane/CO dehydrogenase family CVS41_RS03995 PF00210 Ferritin-like domain CVS41_RS04000 PF01510 N-acetylmuramoyl-L-alanine amidase CVS41_RS04005 PF07308 Protein of unknown function (DUF1456) CVS41_RS04010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CVS41_RS04010 PF00672 HAMP domain CVS41_RS04010 PF00072 Response regulator receiver domain CVS41_RS04010 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS04010 PF01627 Hpt domain CVS41_RS04010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS04015 PF01938 TRAM domain CVS41_RS04015 PF05958 tRNA (Uracil-5-)-methyltransferase CVS41_RS04020 PF02824 TGS domain CVS41_RS04020 PF13291 ACT domain CVS41_RS04020 PF04607 Region found in RelA / SpoT proteins CVS41_RS04025 PF03819 MazG nucleotide pyrophosphohydrolase domain CVS41_RS04030 PF06418 CTP synthase N-terminus CVS41_RS04030 PF00117 Glutamine amidotransferase class-I CVS41_RS04035 PF00113 Enolase, C-terminal TIM barrel domain CVS41_RS04035 PF03952 Enolase, N-terminal domain CVS41_RS04045 PF01695 IstB-like ATP binding protein CVS41_RS04050 PF00665 Integrase core domain CVS41_RS04050 PF02796 Helix-turn-helix domain of resolvase CVS41_RS04090 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CVS41_RS04100 PF00005 ABC transporter CVS41_RS04100 PF12848 ABC transporter CVS41_RS04105 PF00571 CBS domain CVS41_RS04105 PF01743 Poly A polymerase head domain CVS41_RS04105 PF01368 DHH family CVS41_RS04105 PF02272 DHHA1 domain CVS41_RS04120 PF00155 Aminotransferase class I and II CVS41_RS04120 PF00392 Bacterial regulatory proteins, gntR family CVS41_RS04130 PF01810 LysE type translocator CVS41_RS04135 PF01177 Asp/Glu/Hydantoin racemase CVS41_RS04145 PF04074 YhcH/YjgK/YiaL CVS41_RS04150 PF00871 Acetokinase family CVS41_RS04155 PF00924 Mechanosensitive ion channel CVS41_RS04160 PF17969 L,D-transpeptidase C-terminal domain CVS41_RS04160 PF03734 L,D-transpeptidase catalytic domain CVS41_RS04170 PF00474 Sodium:solute symporter family CVS41_RS04175 PF04977 Septum formation initiator CVS41_RS04180 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CVS41_RS04185 PF02542 YgbB family CVS41_RS04190 PF01142 tRNA pseudouridine synthase D (TruD) CVS41_RS04195 PF01975 Survival protein SurE CVS41_RS04205 PF09335 SNARE associated Golgi protein CVS41_RS04210 PF01476 LysM domain CVS41_RS04210 PF01551 Peptidase family M23 CVS41_RS04215 PF00140 Sigma-70 factor, region 1.2 CVS41_RS04215 PF04542 Sigma-70 region 2 CVS41_RS04215 PF04539 Sigma-70 region 3 CVS41_RS04215 PF04545 Sigma-70, region 4 CVS41_RS04220 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CVS41_RS04230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS04230 PF03466 LysR substrate binding domain CVS41_RS04235 PF04371 Porphyromonas-type peptidyl-arginine deiminase CVS41_RS04240 PF01425 Amidase CVS41_RS04250 PF00753 Metallo-beta-lactamase superfamily CVS41_RS04260 PF00270 DEAD/DEAH box helicase CVS41_RS04260 PF00271 Helicase conserved C-terminal domain CVS41_RS04265 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS04275 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase CVS41_RS04280 PF03150 Di-haem cytochrome c peroxidase CVS41_RS04290 PF00445 Ribonuclease T2 family CVS41_RS04300 PF03060 Nitronate monooxygenase CVS41_RS04325 PF09297 NADH pyrophosphatase zinc ribbon domain CVS41_RS04325 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CVS41_RS04325 PF00293 NUDIX domain CVS41_RS04335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS04335 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS04340 PF00486 Transcriptional regulatory protein, C terminal CVS41_RS04340 PF00072 Response regulator receiver domain CVS41_RS04360 PF08335 GlnD PII-uridylyltransferase CVS41_RS04360 PF03710 Glutamate-ammonia ligase adenylyltransferase CVS41_RS04365 PF00672 HAMP domain CVS41_RS04365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS04370 PF00520 Ion transport protein CVS41_RS04370 PF00027 Cyclic nucleotide-binding domain CVS41_RS04375 PF08239 Bacterial SH3 domain CVS41_RS04380 PF14850 DNA-binding domain of Proline dehydrogenase CVS41_RS04380 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CVS41_RS04380 PF00171 Aldehyde dehydrogenase family CVS41_RS04380 PF01619 Proline dehydrogenase CVS41_RS04385 PF00293 NUDIX domain CVS41_RS04385 PF09297 NADH pyrophosphatase zinc ribbon domain CVS41_RS04390 PF01208 Uroporphyrinogen decarboxylase (URO-D) CVS41_RS04395 PF00480 ROK family CVS41_RS04400 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CVS41_RS04400 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CVS41_RS04405 PF00162 Phosphoglycerate kinase CVS41_RS04410 PF01116 Fructose-bisphosphate aldolase class-II CVS41_RS04415 PF01266 FAD dependent oxidoreductase CVS41_RS04435 PF11412 Disulphide bond corrector protein DsbC CVS41_RS04435 PF02683 Cytochrome C biogenesis protein transmembrane region CVS41_RS04440 PF03091 CutA1 divalent ion tolerance protein CVS41_RS04455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS04455 PF03466 LysR substrate binding domain CVS41_RS04460 PF01571 Aminomethyltransferase folate-binding domain CVS41_RS04465 PF03937 Flavinator of succinate dehydrogenase CVS41_RS04475 PF00890 FAD binding domain CVS41_RS04475 PF02910 Fumarate reductase flavoprotein C-term CVS41_RS04480 PF08281 Sigma-70, region 4 CVS41_RS04480 PF04542 Sigma-70 region 2 CVS41_RS04485 PF03872 Anti sigma-E protein RseA, N-terminal domain CVS41_RS04485 PF03873 Anti sigma-E protein RseA, C-terminal domain CVS41_RS04490 PF03888 MucB/RseB N-terminal domain CVS41_RS04490 PF17188 MucB/RseB C-terminal domain CVS41_RS04500 PF06421 GTP-binding protein LepA C-terminus CVS41_RS04500 PF03144 Elongation factor Tu domain 2 CVS41_RS04500 PF00009 Elongation factor Tu GTP binding domain CVS41_RS04500 PF00679 Elongation factor G C-terminus CVS41_RS04505 PF10502 Signal peptidase, peptidase S26 CVS41_RS04510 PF00035 Double-stranded RNA binding motif CVS41_RS04510 PF14622 Ribonuclease-III-like CVS41_RS04515 PF07650 KH domain CVS41_RS04515 PF01926 50S ribosome-binding GTPase CVS41_RS04520 PF11967 Recombination protein O N terminal CVS41_RS04520 PF02565 Recombination protein O C terminal CVS41_RS04525 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CVS41_RS04530 PF00459 Inositol monophosphatase family CVS41_RS04535 PF03795 YCII-related domain CVS41_RS04540 PF04279 Intracellular septation protein A CVS41_RS04545 PF00282 Pyridoxal-dependent decarboxylase conserved domain CVS41_RS04550 PF03006 Haemolysin-III related CVS41_RS04555 PF06826 Predicted Permease Membrane Region CVS41_RS04555 PF02080 TrkA-C domain CVS41_RS04570 PF00563 EAL domain CVS41_RS04570 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS04570 PF03707 Bacterial signalling protein N terminal repeat CVS41_RS04575 PF06877 Regulator of ribonuclease activity B CVS41_RS04590 PF00561 alpha/beta hydrolase fold CVS41_RS04595 PF00194 Eukaryotic-type carbonic anhydrase CVS41_RS04600 PF04227 Indigoidine synthase A like protein CVS41_RS04605 PF00294 pfkB family carbohydrate kinase CVS41_RS04620 PF00582 Universal stress protein family CVS41_RS04630 PF00267 Gram-negative porin CVS41_RS04635 PF08241 Methyltransferase domain CVS41_RS04640 PF00027 Cyclic nucleotide-binding domain CVS41_RS04640 PF13545 Crp-like helix-turn-helix domain CVS41_RS04645 PF02566 OsmC-like protein CVS41_RS04660 PF00485 Phosphoribulokinase / Uridine kinase family CVS41_RS04665 PF06794 Uncharacterised protein family (UPF0270) CVS41_RS04670 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS04670 PF01590 GAF domain CVS41_RS04670 PF00563 EAL domain CVS41_RS04670 PF00360 Phytochrome region CVS41_RS04675 PF00561 alpha/beta hydrolase fold CVS41_RS04680 PF00072 Response regulator receiver domain CVS41_RS04680 PF01584 CheW-like domain CVS41_RS04690 PF09526 Probable metal-binding protein (DUF2387) CVS41_RS04695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CVS41_RS04710 PF00772 DnaB-like helicase N terminal domain CVS41_RS04710 PF03796 DnaB-like helicase C terminal domain CVS41_RS04715 PF00842 Alanine racemase, C-terminal domain CVS41_RS04715 PF01168 Alanine racemase, N-terminal domain CVS41_RS04720 PF01894 Uncharacterised protein family UPF0047 CVS41_RS04725 PF03575 Peptidase family S51 CVS41_RS04735 PF00005 ABC transporter CVS41_RS04740 PF01032 FecCD transport family CVS41_RS04750 PF06228 Haem utilisation ChuX/HutX CVS41_RS04755 PF01243 Pyridoxamine 5'-phosphate oxidase CVS41_RS04775 PF00593 TonB dependent receptor CVS41_RS04775 PF07715 TonB-dependent Receptor Plug Domain CVS41_RS04780 PF12832 MFS_1 like family CVS41_RS04790 PF13443 Cro/C1-type HTH DNA-binding domain CVS41_RS04800 PF01627 Hpt domain CVS41_RS04800 PF00672 HAMP domain CVS41_RS04800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS04800 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS04800 PF00072 Response regulator receiver domain CVS41_RS04800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CVS41_RS04805 PF08329 Chitinase A, N-terminal domain CVS41_RS04805 PF00704 Glycosyl hydrolases family 18 CVS41_RS04810 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS04810 PF05230 MASE2 domain CVS41_RS04815 PF00704 Glycosyl hydrolases family 18 CVS41_RS04815 PF08329 Chitinase A, N-terminal domain CVS41_RS04820 PF12561 ToxR activated gene A lipoprotein domain CVS41_RS04820 PF17945 Beta/Gamma crystallin CVS41_RS04865 PF06483 Chitinase C CVS41_RS04865 PF00704 Glycosyl hydrolases family 18 CVS41_RS04870 PF00072 Response regulator receiver domain CVS41_RS04870 PF01584 CheW-like domain CVS41_RS04875 PF13472 GDSL-like Lipase/Acylhydrolase family CVS41_RS04880 PF00005 ABC transporter CVS41_RS04890 PF01370 NAD dependent epimerase/dehydratase family CVS41_RS04890 PF08338 Domain of unknown function (DUF1731) CVS41_RS04895 PF00563 EAL domain CVS41_RS04895 PF12792 CSS motif domain associated with EAL CVS41_RS04900 PF00155 Aminotransferase class I and II CVS41_RS04905 PF02390 Putative methyltransferase CVS41_RS04910 PF04320 Protein with unknown function (DUF469) CVS41_RS04915 PF04960 Glutaminase CVS41_RS04920 PF00581 Rhodanese-like domain CVS41_RS04925 PF06004 Bacterial protein of unknown function (DUF903) CVS41_RS04935 PF00994 Probable molybdopterin binding domain CVS41_RS04945 PF06738 Putative threonine/serine exporter CVS41_RS04950 PF12821 Threonine/Serine exporter, ThrE CVS41_RS04955 PF00186 Dihydrofolate reductase CVS41_RS04960 PF01507 Phosphoadenosine phosphosulfate reductase family CVS41_RS04965 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CVS41_RS04965 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CVS41_RS04970 PF00175 Oxidoreductase NAD-binding domain CVS41_RS04970 PF00258 Flavodoxin CVS41_RS04970 PF00667 FAD binding domain CVS41_RS04975 PF02567 Phenazine biosynthesis-like protein CVS41_RS04980 PF00152 tRNA synthetases class II (D, K and N) CVS41_RS04980 PF01336 OB-fold nucleic acid binding domain CVS41_RS04990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS04990 PF02743 Cache domain CVS41_RS04990 PF00672 HAMP domain CVS41_RS04995 PF03616 Sodium/glutamate symporter CVS41_RS05000 PF00710 Asparaginase, N-terminal CVS41_RS05000 PF17763 Glutaminase/Asparaginase C-terminal domain CVS41_RS05005 PF07023 Protein of unknown function (DUF1315) CVS41_RS05010 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CVS41_RS05010 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CVS41_RS05025 PF04055 Radical SAM superfamily CVS41_RS05025 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CVS41_RS05030 PF03099 Biotin/lipoate A/B protein ligase family CVS41_RS05035 PF04359 Protein of unknown function (DUF493) CVS41_RS05040 PF00768 D-alanyl-D-alanine carboxypeptidase CVS41_RS05040 PF07943 Penicillin-binding protein 5, C-terminal domain CVS41_RS05045 PF03330 Lytic transglycolase CVS41_RS05045 PF05036 Sporulation related domain CVS41_RS05050 PF13406 Transglycosylase SLT domain CVS41_RS05055 PF01098 Cell cycle protein CVS41_RS05060 PF00905 Penicillin binding protein transpeptidase domain CVS41_RS05060 PF03717 Penicillin-binding Protein dimerisation domain CVS41_RS05065 PF02590 Predicted SPOUT methyltransferase CVS41_RS05075 PF01467 Cytidylyltransferase-like CVS41_RS05090 PF13603 Leucyl-tRNA synthetase, Domain 2 CVS41_RS05090 PF08264 Anticodon-binding domain of tRNA CVS41_RS05090 PF00133 tRNA synthetases class I (I, L, M and V) CVS41_RS05095 PF07295 Zinc-ribbon containing domain CVS41_RS05100 PF01523 Putative modulator of DNA gyrase CVS41_RS05105 PF01523 Putative modulator of DNA gyrase CVS41_RS05110 PF00258 Flavodoxin CVS41_RS05115 PF00589 Phage integrase family CVS41_RS05115 PF02899 Phage integrase, N-terminal SAM-like domain CVS41_RS05120 PF01741 Large-conductance mechanosensitive channel, MscL CVS41_RS05130 PF17768 RecJ OB domain CVS41_RS05130 PF02272 DHHA1 domain CVS41_RS05130 PF01368 DHH family CVS41_RS05135 PF13411 MerR HTH family regulatory protein CVS41_RS05140 PF00795 Carbon-nitrogen hydrolase CVS41_RS05145 PF00571 CBS domain CVS41_RS05145 PF03471 Transporter associated domain CVS41_RS05150 PF02130 Uncharacterized protein family UPF0054 CVS41_RS05155 PF02562 PhoH-like protein CVS41_RS05160 PF04055 Radical SAM superfamily CVS41_RS05160 PF01938 TRAM domain CVS41_RS05160 PF00919 Uncharacterized protein family UPF0004 CVS41_RS05165 PF01494 FAD binding domain CVS41_RS05170 PF00857 Isochorismatase family CVS41_RS05175 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS05175 PF05230 MASE2 domain CVS41_RS05180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS05180 PF03466 LysR substrate binding domain CVS41_RS05190 PF13419 Haloacid dehalogenase-like hydrolase CVS41_RS05200 PF05231 MASE1 CVS41_RS05200 PF08447 PAS fold CVS41_RS05200 PF13426 PAS domain CVS41_RS05200 PF00563 EAL domain CVS41_RS05200 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS05200 PF08448 PAS fold CVS41_RS05210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS41_RS05210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS41_RS05220 PF09285 Elongation factor P, C-terminal CVS41_RS05220 PF01132 Elongation factor P (EF-P) OB domain CVS41_RS05220 PF08207 Elongation factor P (EF-P) KOW-like domain CVS41_RS05230 PF00478 IMP dehydrogenase / GMP reductase domain CVS41_RS05240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS05240 PF08521 Two-component sensor kinase N-terminal CVS41_RS05240 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS05245 PF00486 Transcriptional regulatory protein, C terminal CVS41_RS05245 PF00072 Response regulator receiver domain CVS41_RS05255 PF00106 short chain dehydrogenase CVS41_RS05265 PF00501 AMP-binding enzyme CVS41_RS05280 PF06224 Winged helix DNA-binding domain CVS41_RS05290 PF01546 Peptidase family M20/M25/M40 CVS41_RS05290 PF07687 Peptidase dimerisation domain CVS41_RS05295 PF07670 Nucleoside recognition CVS41_RS05300 PF07670 Nucleoside recognition CVS41_RS05305 PF02313 Fumarate reductase subunit D CVS41_RS05310 PF02300 Fumarate reductase subunit C CVS41_RS05315 PF13085 2Fe-2S iron-sulfur cluster binding domain CVS41_RS05315 PF13183 4Fe-4S dicluster domain CVS41_RS05320 PF02910 Fumarate reductase flavoprotein C-term CVS41_RS05320 PF00890 FAD binding domain CVS41_RS05325 PF02743 Cache domain CVS41_RS05325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS05325 PF00672 HAMP domain CVS41_RS05330 PF03009 Glycerophosphoryl diester phosphodiesterase family CVS41_RS05335 PF12794 Mechanosensitive ion channel inner membrane domain 1 CVS41_RS05335 PF00924 Mechanosensitive ion channel CVS41_RS05335 PF12795 Mechanosensitive ion channel porin domain CVS41_RS05345 PF01551 Peptidase family M23 CVS41_RS05345 PF08525 Opacity-associated protein A N-terminal motif CVS41_RS05345 PF01476 LysM domain CVS41_RS05355 PF03466 LysR substrate binding domain CVS41_RS05355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS05370 PF02743 Cache domain CVS41_RS05370 PF00672 HAMP domain CVS41_RS05370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS05375 PF03466 LysR substrate binding domain CVS41_RS05375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS05380 PF17092 Penicillin-binding protein OB-like domain CVS41_RS05380 PF00912 Transglycosylase CVS41_RS05380 PF00905 Penicillin binding protein transpeptidase domain CVS41_RS05385 PF11104 Type IV pilus assembly protein PilM; CVS41_RS05405 PF11741 AMIN domain CVS41_RS05405 PF03958 Bacterial type II/III secretion system short domain CVS41_RS05405 PF07660 Secretin and TonB N terminus short domain CVS41_RS05405 PF00263 Bacterial type II and III secretion system protein CVS41_RS05410 PF01202 Shikimate kinase CVS41_RS05415 PF01761 3-dehydroquinate synthase CVS41_RS05425 PF02086 D12 class N6 adenine-specific DNA methyltransferase CVS41_RS05430 PF00834 Ribulose-phosphate 3 epimerase family CVS41_RS05435 PF13419 Haloacid dehalogenase-like hydrolase CVS41_RS05440 PF00579 tRNA synthetases class I (W and Y) CVS41_RS05450 PF00117 Glutamine amidotransferase class-I CVS41_RS05455 PF00202 Aminotransferase class-III CVS41_RS05460 PF04958 Arginine N-succinyltransferase beta subunit CVS41_RS05465 PF00171 Aldehyde dehydrogenase family CVS41_RS05480 PF13419 Haloacid dehalogenase-like hydrolase CVS41_RS05485 PF07690 Major Facilitator Superfamily CVS41_RS05490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS41_RS05490 PF10371 Domain of unknown function CVS41_RS05490 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CVS41_RS05490 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CVS41_RS05490 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CVS41_RS05495 PF00128 Alpha amylase, catalytic domain CVS41_RS05495 PF16657 Maltogenic Amylase, C-terminal domain CVS41_RS05505 PF07859 alpha/beta hydrolase fold CVS41_RS05510 PF04266 ASCH domain CVS41_RS05520 PF01048 Phosphorylase superfamily CVS41_RS05525 PF04973 Nicotinamide mononucleotide transporter CVS41_RS05530 PF03600 Citrate transporter CVS41_RS05530 PF02080 TrkA-C domain CVS41_RS05570 PF06071 Protein of unknown function (DUF933) CVS41_RS05570 PF01926 50S ribosome-binding GTPase CVS41_RS05575 PF01195 Peptidyl-tRNA hydrolase CVS41_RS05580 PF02872 5'-nucleotidase, C-terminal domain CVS41_RS05580 PF00149 Calcineurin-like phosphoesterase CVS41_RS05585 PF14572 Phosphoribosyl synthetase-associated domain CVS41_RS05585 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CVS41_RS05595 PF08544 GHMP kinases C terminal CVS41_RS05595 PF00288 GHMP kinases N terminal domain CVS41_RS05600 PF03550 Outer membrane lipoprotein LolB CVS41_RS05605 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CVS41_RS05605 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CVS41_RS05605 PF01488 Shikimate / quinate 5-dehydrogenase CVS41_RS05610 PF03462 PCRF domain CVS41_RS05610 PF00472 RF-1 domain CVS41_RS05615 PF13847 Methyltransferase domain CVS41_RS05615 PF17827 PrmC N-terminal domain CVS41_RS05625 PF13369 Transglutaminase-like superfamily CVS41_RS05630 PF00793 DAHP synthetase I family CVS41_RS05635 PF01228 Glycine radical CVS41_RS05645 PF03167 Uracil DNA glycosylase superfamily CVS41_RS05655 PF01204 Trehalase CVS41_RS05665 PF01161 Phosphatidylethanolamine-binding protein CVS41_RS05670 PF00709 Adenylosuccinate synthetase CVS41_RS05685 PF00155 Aminotransferase class I and II CVS41_RS05690 PF07690 Major Facilitator Superfamily CVS41_RS05695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS05695 PF03466 LysR substrate binding domain CVS41_RS05700 PF00106 short chain dehydrogenase CVS41_RS05705 PF01343 Peptidase family S49 CVS41_RS05705 PF08496 Peptidase family S49 N-terminal CVS41_RS05710 PF07690 Major Facilitator Superfamily CVS41_RS05715 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS05720 PF02635 DsrE/DsrF-like family CVS41_RS05730 PF12838 4Fe-4S dicluster domain CVS41_RS05735 PF01136 Peptidase family U32 CVS41_RS05735 PF16325 Peptidase family U32 C-terminal domain CVS41_RS05740 PF00563 EAL domain CVS41_RS05740 PF00989 PAS fold CVS41_RS05740 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS05740 PF01590 GAF domain CVS41_RS05765 PF00196 Bacterial regulatory proteins, luxR family CVS41_RS05765 PF00072 Response regulator receiver domain CVS41_RS05770 PF00672 HAMP domain CVS41_RS05770 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS05770 PF01627 Hpt domain CVS41_RS05770 PF00072 Response regulator receiver domain CVS41_RS05770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CVS41_RS05770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS05795 PF04996 Succinylarginine dihydrolase CVS41_RS05800 PF01751 Toprim domain CVS41_RS05800 PF01396 Topoisomerase DNA binding C4 zinc finger CVS41_RS05800 PF01131 DNA topoisomerase CVS41_RS05800 PF08272 Topoisomerase I zinc-ribbon-like CVS41_RS05810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS05810 PF08447 PAS fold CVS41_RS05815 PF00728 Glycosyl hydrolase family 20, catalytic domain CVS41_RS05815 PF02838 Glycosyl hydrolase family 20, domain 2 CVS41_RS05820 PF01869 BadF/BadG/BcrA/BcrD ATPase family CVS41_RS05830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS41_RS05830 PF00005 ABC transporter CVS41_RS05835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS41_RS05835 PF00005 ABC transporter CVS41_RS05840 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS05840 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS41_RS05845 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS05850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS41_RS05855 PF00072 Response regulator receiver domain CVS41_RS05855 PF09308 LuxQ, periplasmic CVS41_RS05855 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS05855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS05875 PF10725 Protein of unknown function (DUF2517) CVS41_RS05885 PF05114 Protein of unknown function (DUF692) CVS41_RS05905 PF13426 PAS domain CVS41_RS05905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS05905 PF08447 PAS fold CVS41_RS05925 PF04632 Fusaric acid resistance protein family CVS41_RS05930 PF03454 MoeA C-terminal region (domain IV) CVS41_RS05930 PF03453 MoeA N-terminal region (domain I and II) CVS41_RS05930 PF00994 Probable molybdopterin binding domain CVS41_RS05935 PF12804 MobA-like NTP transferase domain CVS41_RS05940 PF00005 ABC transporter CVS41_RS05945 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS05950 PF12849 PBP superfamily domain CVS41_RS05955 PF00072 Response regulator receiver domain CVS41_RS05955 PF02954 Bacterial regulatory protein, Fis family CVS41_RS05955 PF00158 Sigma-54 interaction domain CVS41_RS05960 PF00989 PAS fold CVS41_RS05960 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS05970 PF02634 FdhD/NarQ family CVS41_RS06005 PF01568 Molydopterin dinucleotide binding domain CVS41_RS06005 PF12838 4Fe-4S dicluster domain CVS41_RS06005 PF01568 Molydopterin dinucleotide binding domain CVS41_RS06005 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CVS41_RS06005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CVS41_RS06005 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CVS41_RS06005 PF12838 4Fe-4S dicluster domain CVS41_RS06005 PF00384 Molybdopterin oxidoreductase CVS41_RS06005 PF00384 Molybdopterin oxidoreductase CVS41_RS06005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CVS41_RS06010 PF13247 4Fe-4S dicluster domain CVS41_RS06030 PF00390 Malic enzyme, N-terminal domain CVS41_RS06030 PF03949 Malic enzyme, NAD binding domain CVS41_RS06035 PF05433 Glycine zipper 2TM domain CVS41_RS06035 PF16998 17 kDa outer membrane surface antigen CVS41_RS06045 PF00860 Permease family CVS41_RS06050 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS41_RS06055 PF00672 HAMP domain CVS41_RS06055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS06080 PF00589 Phage integrase family CVS41_RS06080 PF02899 Phage integrase, N-terminal SAM-like domain CVS41_RS06145 PF13438 Domain of unknown function (DUF4113) CVS41_RS06145 PF00817 impB/mucB/samB family CVS41_RS06145 PF11798 IMS family HHH motif CVS41_RS06145 PF11799 impB/mucB/samB family C-terminal domain CVS41_RS06150 PF00717 Peptidase S24-like CVS41_RS06165 PF18019 HD domain CVS41_RS06165 PF18395 Cas3 C-terminal domain CVS41_RS06170 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) CVS41_RS06180 PF09344 CT1975-like protein CVS41_RS06190 PF08798 CRISPR associated protein CVS41_RS06195 PF01867 CRISPR associated protein Cas1 CVS41_RS06200 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) CVS41_RS06240 PF02685 Glucokinase CVS41_RS06245 PF01418 Helix-turn-helix domain, rpiR family CVS41_RS06245 PF01380 SIS domain CVS41_RS06250 PF02887 Pyruvate kinase, alpha/beta domain CVS41_RS06250 PF00224 Pyruvate kinase, barrel domain CVS41_RS06260 PF07969 Amidohydrolase family CVS41_RS06270 PF02049 Flagellar hook-basal body complex protein FliE CVS41_RS06275 PF08345 Flagellar M-ring protein C-terminal CVS41_RS06275 PF01514 Secretory protein of YscJ/FliF family CVS41_RS06280 PF14842 FliG N-terminal domain CVS41_RS06280 PF01706 FliG C-terminal domain CVS41_RS06280 PF14841 FliG middle domain CVS41_RS06290 PF18269 T3SS EscN ATPase C-terminal domain CVS41_RS06290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CVS41_RS06310 PF02154 Flagellar motor switch protein FliM CVS41_RS06310 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CVS41_RS06315 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CVS41_RS06320 PF04347 Flagellar biosynthesis protein, FliO CVS41_RS06325 PF00813 FliP family CVS41_RS06330 PF01313 Bacterial export proteins, family 3 CVS41_RS06335 PF01311 Bacterial export proteins, family 1 CVS41_RS06340 PF01312 FlhB HrpN YscU SpaS Family CVS41_RS06345 PF00771 FHIPEP family CVS41_RS06350 PF00448 SRP54-type protein, GTPase domain CVS41_RS06355 PF10609 NUBPL iron-transfer P-loop NTPase CVS41_RS06360 PF04539 Sigma-70 region 3 CVS41_RS06360 PF04542 Sigma-70 region 2 CVS41_RS06360 PF04545 Sigma-70, region 4 CVS41_RS06365 PF00072 Response regulator receiver domain CVS41_RS06370 PF04344 Chemotaxis phosphatase, CheZ CVS41_RS06375 PF01627 Hpt domain CVS41_RS06375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS06375 PF02895 Signal transducing histidine kinase, homodimeric domain CVS41_RS06375 PF01584 CheW-like domain CVS41_RS06375 PF00072 Response regulator receiver domain CVS41_RS06380 PF00072 Response regulator receiver domain CVS41_RS06380 PF01339 CheB methylesterase CVS41_RS06385 PF01618 MotA/TolQ/ExbB proton channel family CVS41_RS06390 PF13677 Membrane MotB of proton-channel complex MotA/MotB CVS41_RS06390 PF00691 OmpA family CVS41_RS06395 PF13614 AAA domain CVS41_RS06405 PF01584 CheW-like domain CVS41_RS06415 PF00005 ABC transporter CVS41_RS06420 PF03379 CcmB protein CVS41_RS06425 PF01578 Cytochrome C assembly protein CVS41_RS06430 PF04995 Heme exporter protein D (CcmD) CVS41_RS06435 PF03100 CcmE CVS41_RS06440 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CVS41_RS06440 PF01578 Cytochrome C assembly protein CVS41_RS06445 PF08534 Redoxin CVS41_RS06450 PF03918 Cytochrome C biogenesis protein CVS41_RS06460 PF04333 MlaA lipoprotein CVS41_RS06465 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CVS41_RS06465 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CVS41_RS06470 PF00462 Glutaredoxin CVS41_RS06475 PF00291 Pyridoxal-phosphate dependent enzyme CVS41_RS06480 PF03222 Tryptophan/tyrosine permease family CVS41_RS06485 PF00871 Acetokinase family CVS41_RS06490 PF02901 Pyruvate formate lyase-like CVS41_RS06490 PF01228 Glycine radical CVS41_RS06495 PF01042 Endoribonuclease L-PSP CVS41_RS06500 PF01029 NusB family CVS41_RS06500 PF01189 16S rRNA methyltransferase RsmB/F CVS41_RS06530 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CVS41_RS06530 PF01243 Pyridoxamine 5'-phosphate oxidase CVS41_RS06535 PF13417 Glutathione S-transferase, N-terminal domain CVS41_RS06555 PF08007 Cupin superfamily protein CVS41_RS06560 PF08328 Adenylosuccinate lyase C-terminal CVS41_RS06560 PF00206 Lyase CVS41_RS06565 PF04356 Protein of unknown function (DUF489) CVS41_RS06575 PF00293 NUDIX domain CVS41_RS06580 PF00849 RNA pseudouridylate synthase CVS41_RS06590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CVS41_RS06595 PF07690 Major Facilitator Superfamily CVS41_RS06600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CVS41_RS06600 PF02378 Phosphotransferase system, EIIC CVS41_RS06600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CVS41_RS06625 PF00210 Ferritin-like domain CVS41_RS06655 PF00356 Bacterial regulatory proteins, lacI family CVS41_RS06655 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CVS41_RS06665 PF00367 phosphotransferase system, EIIB CVS41_RS06665 PF02378 Phosphotransferase system, EIIC CVS41_RS06670 PF00155 Aminotransferase class I and II CVS41_RS06675 PF02075 Crossover junction endodeoxyribonuclease RuvC CVS41_RS06685 PF00873 AcrB/AcrD/AcrF family CVS41_RS06690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS41_RS06690 PF02770 Acyl-CoA dehydrogenase, middle domain CVS41_RS06690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS41_RS06690 PF09317 Domain of unknown function (DUF1974) CVS41_RS06695 PF00440 Bacterial regulatory proteins, tetR family CVS41_RS06710 PF13361 UvrD-like helicase C-terminal domain CVS41_RS06710 PF00580 UvrD/REP helicase N-terminal domain CVS41_RS06710 PF12462 DNA helicase IV / RNA helicase N terminal CVS41_RS06725 PF02384 N-6 DNA Methylase CVS41_RS06725 PF12161 HsdM N-terminal domain CVS41_RS06735 PF01420 Type I restriction modification DNA specificity domain CVS41_RS06745 PF04851 Type III restriction enzyme, res subunit CVS41_RS06745 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CVS41_RS06745 PF00271 Helicase conserved C-terminal domain CVS41_RS06745 PF08463 EcoEI R protein C-terminal CVS41_RS06755 PF00239 Resolvase, N terminal domain CVS41_RS06755 PF02796 Helix-turn-helix domain of resolvase CVS41_RS06795 PF00480 ROK family CVS41_RS06800 PF17128 Domain of unknown function (DUF5107) CVS41_RS06800 PF13181 Tetratricopeptide repeat CVS41_RS06805 PF00083 Sugar (and other) transporter CVS41_RS06815 PF00384 Molybdopterin oxidoreductase CVS41_RS06815 PF01568 Molydopterin dinucleotide binding domain CVS41_RS06815 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CVS41_RS06815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CVS41_RS06815 PF12838 4Fe-4S dicluster domain CVS41_RS06820 PF00563 EAL domain CVS41_RS06820 PF03707 Bacterial signalling protein N terminal repeat CVS41_RS06820 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS06825 PF09456 RcsC Alpha-Beta-Loop (ABL) CVS41_RS06825 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS06825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS06825 PF00072 Response regulator receiver domain CVS41_RS06835 PF01668 SmpB protein CVS41_RS06840 PF03364 Polyketide cyclase / dehydrase and lipid transport CVS41_RS06845 PF03658 RnfH family Ubiquitin CVS41_RS06850 PF07687 Peptidase dimerisation domain CVS41_RS06850 PF01546 Peptidase family M20/M25/M40 CVS41_RS06855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS41_RS06855 PF02770 Acyl-CoA dehydrogenase, middle domain CVS41_RS06855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS41_RS06855 PF09317 Domain of unknown function (DUF1974) CVS41_RS06860 PF13580 SIS domain CVS41_RS06865 PF13230 Glutamine amidotransferases class-II CVS41_RS06875 PF01933 Uncharacterised protein family UPF0052 CVS41_RS06885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS06885 PF00072 Response regulator receiver domain CVS41_RS06885 PF09456 RcsC Alpha-Beta-Loop (ABL) CVS41_RS06885 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS06895 PF00196 Bacterial regulatory proteins, luxR family CVS41_RS06895 PF00072 Response regulator receiver domain CVS41_RS06900 PF07730 Histidine kinase CVS41_RS06900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS06900 PF00672 HAMP domain CVS41_RS06900 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CVS41_RS06905 PF06463 Molybdenum Cofactor Synthesis C CVS41_RS06905 PF04055 Radical SAM superfamily CVS41_RS06910 PF13187 4Fe-4S dicluster domain CVS41_RS06910 PF12838 4Fe-4S dicluster domain CVS41_RS06920 PF10518 TAT (twin-arginine translocation) pathway signal sequence CVS41_RS06920 PF01568 Molydopterin dinucleotide binding domain CVS41_RS06920 PF00384 Molybdopterin oxidoreductase CVS41_RS06920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CVS41_RS06925 PF12800 4Fe-4S binding domain CVS41_RS06925 PF12838 4Fe-4S dicluster domain CVS41_RS06930 PF12801 4Fe-4S binding domain CVS41_RS06930 PF12837 4Fe-4S binding domain CVS41_RS06935 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CVS41_RS06940 PF03264 NapC/NirT cytochrome c family, N-terminal region CVS41_RS06945 PF00994 Probable molybdopterin binding domain CVS41_RS06950 PF01967 MoaC family CVS41_RS06955 PF02597 ThiS family CVS41_RS06960 PF02391 MoaE protein CVS41_RS06970 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS06975 PF03459 TOBE domain CVS41_RS06975 PF00005 ABC transporter CVS41_RS06980 PF12697 Alpha/beta hydrolase family CVS41_RS06985 PF00899 ThiF family CVS41_RS06990 PF03454 MoeA C-terminal region (domain IV) CVS41_RS06990 PF00994 Probable molybdopterin binding domain CVS41_RS06990 PF03453 MoeA N-terminal region (domain I and II) CVS41_RS06995 PF01227 GTP cyclohydrolase I CVS41_RS07000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS07000 PF00672 HAMP domain CVS41_RS07000 PF17200 Single Cache domain 2 CVS41_RS07005 PF01268 Formate--tetrahydrofolate ligase CVS41_RS07015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS07015 PF03466 LysR substrate binding domain CVS41_RS07020 PF04264 YceI-like domain CVS41_RS07030 PF05221 S-adenosyl-L-homocysteine hydrolase CVS41_RS07030 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CVS41_RS07045 PF01546 Peptidase family M20/M25/M40 CVS41_RS07045 PF07687 Peptidase dimerisation domain CVS41_RS07055 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CVS41_RS07055 PF17944 Arginine decarboxylase C-terminal helical extension CVS41_RS07055 PF17810 Arginine decarboxylase helical bundle domain CVS41_RS07065 PF14863 Alkyl sulfatase dimerisation CVS41_RS07065 PF14864 Alkyl sulfatase C-terminal CVS41_RS07065 PF00753 Metallo-beta-lactamase superfamily CVS41_RS07080 PF12729 Four helix bundle sensory module for signal transduction CVS41_RS07080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS07080 PF00672 HAMP domain CVS41_RS07090 PF01042 Endoribonuclease L-PSP CVS41_RS07095 PF03313 Serine dehydratase alpha chain CVS41_RS07100 PF08348 YheO-like PAS domain CVS41_RS07100 PF13309 HTH domain CVS41_RS07105 PF00300 Histidine phosphatase superfamily (branch 1) CVS41_RS07110 PF07055 Enoyl reductase FAD binding domain CVS41_RS07110 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CVS41_RS07110 PF12241 Trans-2-enoyl-CoA reductase catalytic region CVS41_RS07115 PF03606 C4-dicarboxylate anaerobic carrier CVS41_RS07120 PF00155 Aminotransferase class I and II CVS41_RS07130 PF00230 Major intrinsic protein CVS41_RS07135 PF01551 Peptidase family M23 CVS41_RS07135 PF01464 Transglycosylase SLT domain CVS41_RS07135 PF10145 Phage-related minor tail protein CVS41_RS07150 PF13396 Phospholipase_D-nuclease N-terminal CVS41_RS07150 PF13091 PLD-like domain CVS41_RS07160 PF01842 ACT domain CVS41_RS07160 PF00551 Formyl transferase CVS41_RS07165 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CVS41_RS07175 PF00085 Thioredoxin CVS41_RS07180 PF01648 4'-phosphopantetheinyl transferase superfamily CVS41_RS07185 PF00877 NlpC/P60 family CVS41_RS07190 PF05971 RNA methyltransferase CVS41_RS07195 PF01575 MaoC like domain CVS41_RS07200 PF00939 Sodium:sulfate symporter transmembrane region CVS41_RS07210 PF03734 L,D-transpeptidase catalytic domain CVS41_RS07210 PF01476 LysM domain CVS41_RS07210 PF17969 L,D-transpeptidase C-terminal domain CVS41_RS07220 PF00873 AcrB/AcrD/AcrF family CVS41_RS07225 PF00529 HlyD membrane-fusion protein of T1SS CVS41_RS07225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS41_RS07230 PF00486 Transcriptional regulatory protein, C terminal CVS41_RS07230 PF00072 Response regulator receiver domain CVS41_RS07235 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS07235 PF00672 HAMP domain CVS41_RS07235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS07240 PF00176 SNF2 family N-terminal domain CVS41_RS07240 PF00271 Helicase conserved C-terminal domain CVS41_RS07240 PF04434 SWIM zinc finger CVS41_RS07245 PF05472 DNA replication terminus site-binding protein (Ter protein) CVS41_RS07255 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CVS41_RS07260 PF01476 LysM domain CVS41_RS07260 PF01464 Transglycosylase SLT domain CVS41_RS07265 PF00753 Metallo-beta-lactamase superfamily CVS41_RS07265 PF16123 Hydroxyacylglutathione hydrolase C-terminus CVS41_RS07270 PF08241 Methyltransferase domain CVS41_RS07275 PF00075 RNase H CVS41_RS07280 PF00929 Exonuclease CVS41_RS07290 PF11849 Domain of unknown function (DUF3369) CVS41_RS07295 PF04954 Siderophore-interacting protein CVS41_RS07295 PF08021 Siderophore-interacting FAD-binding domain CVS41_RS07300 PF01032 FecCD transport family CVS41_RS07305 PF01032 FecCD transport family CVS41_RS07310 PF00005 ABC transporter CVS41_RS07315 PF01497 Periplasmic binding protein CVS41_RS07325 PF00873 AcrB/AcrD/AcrF family CVS41_RS07330 PF00529 HlyD membrane-fusion protein of T1SS CVS41_RS07330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS41_RS07340 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CVS41_RS07355 PF00873 AcrB/AcrD/AcrF family CVS41_RS07360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS41_RS07365 PF03372 Endonuclease/Exonuclease/phosphatase family CVS41_RS07380 PF02424 ApbE family CVS41_RS07385 PF00127 Copper binding proteins, plastocyanin/azurin family CVS41_RS07395 PF04337 Protein of unknown function, DUF480 CVS41_RS07400 PF03707 Bacterial signalling protein N terminal repeat CVS41_RS07400 PF00563 EAL domain CVS41_RS07400 PF13188 PAS domain CVS41_RS07400 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS07410 PF04325 Protein of unknown function (DUF465) CVS41_RS07420 PF01554 MatE CVS41_RS07445 PF00465 Iron-containing alcohol dehydrogenase CVS41_RS07455 PF00440 Bacterial regulatory proteins, tetR family CVS41_RS07455 PF08359 YsiA-like protein, C-terminal region CVS41_RS07460 PF00171 Aldehyde dehydrogenase family CVS41_RS07470 PF01156 Inosine-uridine preferring nucleoside hydrolase CVS41_RS07480 PF00034 Cytochrome c CVS41_RS07480 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS41_RS07490 PF05656 Protein of unknown function (DUF805) CVS41_RS07510 PF00672 HAMP domain CVS41_RS07510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS07515 PF01238 Phosphomannose isomerase type I CVS41_RS07520 PF12833 Helix-turn-helix domain CVS41_RS07525 PF00180 Isocitrate/isopropylmalate dehydrogenase CVS41_RS07535 PF00291 Pyridoxal-phosphate dependent enzyme CVS41_RS07545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS07545 PF03466 LysR substrate binding domain CVS41_RS07555 PF00877 NlpC/P60 family CVS41_RS07560 PF03466 LysR substrate binding domain CVS41_RS07560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS07565 PF00578 AhpC/TSA family CVS41_RS07565 PF10417 C-terminal domain of 1-Cys peroxiredoxin CVS41_RS07585 PF08003 Protein of unknown function (DUF1698) CVS41_RS07590 PF13649 Methyltransferase domain CVS41_RS07595 PF01904 Protein of unknown function DUF72 CVS41_RS07605 PF01336 OB-fold nucleic acid binding domain CVS41_RS07605 PF02938 GAD domain CVS41_RS07605 PF00152 tRNA synthetases class II (D, K and N) CVS41_RS07610 PF01709 Transcriptional regulator CVS41_RS07615 PF00171 Aldehyde dehydrogenase family CVS41_RS07615 PF00465 Iron-containing alcohol dehydrogenase CVS41_RS07620 PF01914 MarC family integral membrane protein CVS41_RS07625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS41_RS07630 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS07635 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS07635 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS41_RS07640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS41_RS07640 PF00005 ABC transporter CVS41_RS07645 PF00005 ABC transporter CVS41_RS07645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS41_RS07650 PF03741 Integral membrane protein TerC family CVS41_RS07655 PF01168 Alanine racemase, N-terminal domain CVS41_RS07655 PF00842 Alanine racemase, C-terminal domain CVS41_RS07665 PF00437 Type II/IV secretion system protein CVS41_RS07680 PF01032 FecCD transport family CVS41_RS07685 PF00005 ABC transporter CVS41_RS07690 PF00793 DAHP synthetase I family CVS41_RS07695 PF01219 Prokaryotic diacylglycerol kinase CVS41_RS07700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS41_RS07700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS41_RS07700 PF01842 ACT domain CVS41_RS07705 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CVS41_RS07710 PF01812 5-formyltetrahydrofolate cyclo-ligase family CVS41_RS07725 PF01113 Dihydrodipicolinate reductase, N-terminus CVS41_RS07725 PF05173 Dihydrodipicolinate reductase, C-terminus CVS41_RS07730 PF00117 Glutamine amidotransferase class-I CVS41_RS07730 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CVS41_RS07735 PF02142 MGS-like domain CVS41_RS07735 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CVS41_RS07735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS41_RS07740 PF07759 Protein of unknown function (DUF1615) CVS41_RS07745 PF01817 Chorismate mutase type II CVS41_RS07745 PF02153 Prephenate dehydrogenase CVS41_RS07750 PF00793 DAHP synthetase I family CVS41_RS07755 PF00483 Nucleotidyl transferase CVS41_RS07760 PF02355 Protein export membrane protein CVS41_RS07760 PF07549 SecD/SecF GG Motif CVS41_RS07765 PF13721 SecD export protein N-terminal TM region CVS41_RS07765 PF02355 Protein export membrane protein CVS41_RS07765 PF07549 SecD/SecF GG Motif CVS41_RS07800 PF01230 HIT domain CVS41_RS07805 PF00672 HAMP domain CVS41_RS07805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS07815 PF01979 Amidohydrolase family CVS41_RS07830 PF00375 Sodium:dicarboxylate symporter family CVS41_RS07835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS07835 PF13426 PAS domain CVS41_RS07835 PF08447 PAS fold CVS41_RS07845 PF05661 Protein of unknown function (DUF808) CVS41_RS07850 PF01432 Peptidase family M3 CVS41_RS07850 PF08439 Oligopeptidase F CVS41_RS07855 PF00860 Permease family CVS41_RS07860 PF05728 Uncharacterised protein family (UPF0227) CVS41_RS07865 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS41_RS07875 PF04055 Radical SAM superfamily CVS41_RS07880 PF00563 EAL domain CVS41_RS07880 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS07880 PF03707 Bacterial signalling protein N terminal repeat CVS41_RS07885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS41_RS07885 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS41_RS07895 PF07678 A-macroglobulin TED domain CVS41_RS07895 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CVS41_RS07895 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CVS41_RS07895 PF17962 Bacterial macroglobulin domain 6 CVS41_RS07895 PF00207 Alpha-2-macroglobulin family CVS41_RS07895 PF01835 MG2 domain CVS41_RS07895 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CVS41_RS07895 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CVS41_RS07895 PF07703 Alpha-2-macroglobulin bait region domain CVS41_RS07900 PF00905 Penicillin binding protein transpeptidase domain CVS41_RS07900 PF00912 Transglycosylase CVS41_RS07900 PF06832 Penicillin-Binding Protein C-terminus Family CVS41_RS07915 PF02568 Thiamine biosynthesis protein (ThiI) CVS41_RS07915 PF02926 THUMP domain CVS41_RS07925 PF03458 UPF0126 domain CVS41_RS07930 PF00700 Bacterial flagellin C-terminal helical region CVS41_RS07930 PF00669 Bacterial flagellin N-terminal helical region CVS41_RS07930 PF07196 Flagellin hook IN motif CVS41_RS07935 PF07196 Flagellin hook IN motif CVS41_RS07935 PF00700 Bacterial flagellin C-terminal helical region CVS41_RS07935 PF00669 Bacterial flagellin N-terminal helical region CVS41_RS07945 PF02465 Flagellar hook-associated protein 2 N-terminus CVS41_RS07945 PF07196 Flagellin hook IN motif CVS41_RS07945 PF07195 Flagellar hook-associated protein 2 C-terminus CVS41_RS07950 PF02561 Flagellar protein FliS CVS41_RS07985 PF09940 Domain of unknown function (DUF2172) CVS41_RS07985 PF16254 Domain of unknown function (DUF4910) CVS41_RS07985 PF16221 winged helix-turn-helix CVS41_RS08000 PF03102 NeuB family CVS41_RS08000 PF08666 SAF domain CVS41_RS08010 PF02348 Cytidylyltransferase CVS41_RS08030 PF00501 AMP-binding enzyme CVS41_RS08030 PF13193 AMP-binding enzyme C-terminal domain CVS41_RS08045 PF00535 Glycosyl transferase family 2 CVS41_RS08055 PF03275 UDP-galactopyranose mutase CVS41_RS08065 PF00535 Glycosyl transferase family 2 CVS41_RS08085 PF01209 ubiE/COQ5 methyltransferase family CVS41_RS08090 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CVS41_RS08095 PF02719 Polysaccharide biosynthesis protein CVS41_RS08100 PF01497 Periplasmic binding protein CVS41_RS08110 PF01048 Phosphorylase superfamily CVS41_RS08115 PF02535 ZIP Zinc transporter CVS41_RS08125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS41_RS08130 PF00730 HhH-GPD superfamily base excision DNA repair protein CVS41_RS08130 PF00633 Helix-hairpin-helix motif CVS41_RS08130 PF10576 Iron-sulfur binding domain of endonuclease III CVS41_RS08135 PF02508 Rnf-Nqr subunit, membrane protein CVS41_RS08140 PF04205 FMN-binding domain CVS41_RS08145 PF03116 NQR2, RnfD, RnfE family CVS41_RS08150 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CVS41_RS08150 PF12838 4Fe-4S dicluster domain CVS41_RS08150 PF13375 RnfC Barrel sandwich hybrid domain CVS41_RS08150 PF10531 SLBB domain CVS41_RS08155 PF04060 Putative Fe-S cluster CVS41_RS08160 PF02508 Rnf-Nqr subunit, membrane protein CVS41_RS08165 PF01844 HNH endonuclease CVS41_RS08175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS41_RS08185 PF00849 RNA pseudouridylate synthase CVS41_RS08185 PF01479 S4 domain CVS41_RS08190 PF07690 Major Facilitator Superfamily CVS41_RS08195 PF03466 LysR substrate binding domain CVS41_RS08195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS08200 PF10689 Protein of unknown function (DUF2496) CVS41_RS08215 PF04391 Protein of unknown function (DUF533) CVS41_RS08225 PF00392 Bacterial regulatory proteins, gntR family CVS41_RS08225 PF00155 Aminotransferase class I and II CVS41_RS08230 PF01654 Cytochrome bd terminal oxidase subunit I CVS41_RS08235 PF02322 Cytochrome bd terminal oxidase subunit II CVS41_RS08255 PF05114 Protein of unknown function (DUF692) CVS41_RS08270 PF02525 Flavodoxin-like fold CVS41_RS08275 PF07690 Major Facilitator Superfamily CVS41_RS08285 PF00248 Aldo/keto reductase family CVS41_RS08300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS08300 PF03466 LysR substrate binding domain CVS41_RS08310 PF00672 HAMP domain CVS41_RS08310 PF02743 Cache domain CVS41_RS08310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS08315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CVS41_RS08315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CVS41_RS08320 PF00230 Major intrinsic protein CVS41_RS08325 PF07690 Major Facilitator Superfamily CVS41_RS08330 PF08220 DeoR-like helix-turn-helix domain CVS41_RS08330 PF00455 DeoR C terminal sensor domain CVS41_RS08335 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CVS41_RS08335 PF01266 FAD dependent oxidoreductase CVS41_RS08340 PF03009 Glycerophosphoryl diester phosphodiesterase family CVS41_RS08345 PF03974 Ecotin CVS41_RS08350 PF04219 Protein of unknown function, DUF CVS41_RS08355 PF03466 LysR substrate binding domain CVS41_RS08355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS08365 PF00155 Aminotransferase class I and II CVS41_RS08380 PF03772 Competence protein CVS41_RS08380 PF00753 Metallo-beta-lactamase superfamily CVS41_RS08385 PF00664 ABC transporter transmembrane region CVS41_RS08385 PF00005 ABC transporter CVS41_RS08390 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CVS41_RS08395 PF03966 Trm112p-like protein CVS41_RS08400 PF02348 Cytidylyltransferase CVS41_RS08405 PF00072 Response regulator receiver domain CVS41_RS08405 PF00196 Bacterial regulatory proteins, luxR family CVS41_RS08410 PF01541 GIY-YIG catalytic domain CVS41_RS08410 PF08459 UvrC Helix-hairpin-helix N-terminal CVS41_RS08410 PF02151 UvrB/uvrC motif CVS41_RS08415 PF01066 CDP-alcohol phosphatidyltransferase CVS41_RS08435 PF13356 Arm DNA-binding domain CVS41_RS08435 PF00589 Phage integrase family CVS41_RS08510 PF13537 Glutamine amidotransferase domain CVS41_RS08510 PF00733 Asparagine synthase CVS41_RS08520 PF00999 Sodium/hydrogen exchanger family CVS41_RS08520 PF02254 TrkA-N domain CVS41_RS08525 PF13344 Haloacid dehalogenase-like hydrolase CVS41_RS08530 PF00962 Adenosine/AMP deaminase CVS41_RS08535 PF08240 Alcohol dehydrogenase GroES-like domain CVS41_RS08535 PF00107 Zinc-binding dehydrogenase CVS41_RS08540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CVS41_RS08545 PF03741 Integral membrane protein TerC family CVS41_RS08545 PF03471 Transporter associated domain CVS41_RS08555 PF01565 FAD binding domain CVS41_RS08555 PF13183 4Fe-4S dicluster domain CVS41_RS08555 PF02913 FAD linked oxidases, C-terminal domain CVS41_RS08565 PF03061 Thioesterase superfamily CVS41_RS08570 PF00270 DEAD/DEAH box helicase CVS41_RS08570 PF00271 Helicase conserved C-terminal domain CVS41_RS08570 PF03880 DbpA RNA binding domain CVS41_RS08575 PF13726 Na+-H+ antiporter family CVS41_RS08575 PF03553 Na+/H+ antiporter family CVS41_RS08580 PF00929 Exonuclease CVS41_RS08585 PF01569 PAP2 superfamily CVS41_RS08590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS41_RS08590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS41_RS08590 PF11890 Domain of unknown function (DUF3410) CVS41_RS08595 PF02774 Semialdehyde dehydrogenase, dimerisation domain CVS41_RS08595 PF01118 Semialdehyde dehydrogenase, NAD binding domain CVS41_RS08605 PF01416 tRNA pseudouridine synthase CVS41_RS08610 PF01039 Carboxyl transferase domain CVS41_RS08610 PF17848 Acetyl-coA carboxylase zinc finger domain CVS41_RS08615 PF08245 Mur ligase middle domain CVS41_RS08615 PF02875 Mur ligase family, glutamate ligase domain CVS41_RS08620 PF05036 Sporulation related domain CVS41_RS08625 PF01906 Putative heavy-metal-binding CVS41_RS08635 PF10414 Sirohaem synthase dimerisation region CVS41_RS08635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CVS41_RS08635 PF14824 Sirohaem biosynthesis protein central CVS41_RS08640 PF13187 4Fe-4S dicluster domain CVS41_RS08640 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CVS41_RS08640 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CVS41_RS08645 PF00175 Oxidoreductase NAD-binding domain CVS41_RS08645 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CVS41_RS08650 PF17179 4Fe-4S dicluster domain CVS41_RS08655 PF01734 Patatin-like phospholipase CVS41_RS08660 PF17676 LD-carboxypeptidase C-terminal domain CVS41_RS08660 PF02016 LD-carboxypeptidase N-terminal domain CVS41_RS08665 PF00884 Sulfatase CVS41_RS08675 PF01842 ACT domain CVS41_RS08675 PF00696 Amino acid kinase family CVS41_RS08680 PF00583 Acetyltransferase (GNAT) family CVS41_RS08680 PF00696 Amino acid kinase family CVS41_RS08685 PF01625 Peptide methionine sulfoxide reductase CVS41_RS08705 PF00561 alpha/beta hydrolase fold CVS41_RS08710 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CVS41_RS08720 PF02687 FtsX-like permease family CVS41_RS08720 PF12704 MacB-like periplasmic core domain CVS41_RS08725 PF00005 ABC transporter CVS41_RS08735 PF03600 Citrate transporter CVS41_RS08740 PF07690 Major Facilitator Superfamily CVS41_RS08760 PF01593 Flavin containing amine oxidoreductase CVS41_RS08765 PF03239 Iron permease FTR1 family CVS41_RS08780 PF03350 Uncharacterized protein family, UPF0114 CVS41_RS08800 PF01740 STAS domain CVS41_RS08800 PF00916 Sulfate permease family CVS41_RS08815 PF03706 Lysylphosphatidylglycerol synthase TM region CVS41_RS08815 PF09924 Uncharacterised conserved protein (DUF2156) CVS41_RS08825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS08825 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS08825 PF00672 HAMP domain CVS41_RS08830 PF00486 Transcriptional regulatory protein, C terminal CVS41_RS08830 PF00072 Response regulator receiver domain CVS41_RS08850 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CVS41_RS08850 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CVS41_RS08855 PF00313 'Cold-shock' DNA-binding domain CVS41_RS08860 PF02617 ATP-dependent Clp protease adaptor protein ClpS CVS41_RS08865 PF00004 ATPase family associated with various cellular activities (AAA) CVS41_RS08865 PF07724 AAA domain (Cdc48 subfamily) CVS41_RS08865 PF17871 AAA lid domain CVS41_RS08865 PF02861 Clp amino terminal domain, pathogenicity island component CVS41_RS08865 PF10431 C-terminal, D2-small domain, of ClpB protein CVS41_RS08870 PF01176 Translation initiation factor 1A / IF-1 CVS41_RS08875 PF04377 Arginine-tRNA-protein transferase, C terminus CVS41_RS08875 PF04376 Arginine-tRNA-protein transferase, N terminus CVS41_RS08880 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CVS41_RS08885 PF05433 Glycine zipper 2TM domain CVS41_RS08890 PF17158 Membrane-associated sensor, integral membrane domain CVS41_RS08890 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS08895 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS41_RS08900 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CVS41_RS08900 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CVS41_RS08905 PF01037 Lrp/AsnC ligand binding domain CVS41_RS08910 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CVS41_RS08910 PF17854 FtsK alpha domain CVS41_RS08910 PF09397 Ftsk gamma domain CVS41_RS08910 PF01580 FtsK/SpoIIIE family CVS41_RS08915 PF03548 Outer membrane lipoprotein carrier protein LolA CVS41_RS08920 PF12002 MgsA AAA+ ATPase C terminal CVS41_RS08920 PF16193 AAA C-terminal domain CVS41_RS08920 PF00004 ATPase family associated with various cellular activities (AAA) CVS41_RS08925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CVS41_RS08925 PF02403 Seryl-tRNA synthetase N-terminal domain CVS41_RS08930 PF02674 Colicin V production protein CVS41_RS08935 PF00156 Phosphoribosyl transferase domain CVS41_RS08940 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CVS41_RS08945 PF05191 Adenylate kinase, active site lid CVS41_RS08950 PF00762 Ferrochelatase CVS41_RS08960 PF00294 pfkB family carbohydrate kinase CVS41_RS08975 PF03707 Bacterial signalling protein N terminal repeat CVS41_RS08975 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS08975 PF00563 EAL domain CVS41_RS08980 PF00483 Nucleotidyl transferase CVS41_RS08990 PF07273 Protein of unknown function (DUF1439) CVS41_RS09000 PF11143 Protein of unknown function (DUF2919) CVS41_RS09005 PF01544 CorA-like Mg2+ transporter protein CVS41_RS09015 PF01012 Electron transfer flavoprotein domain CVS41_RS09020 PF01012 Electron transfer flavoprotein domain CVS41_RS09020 PF00766 Electron transfer flavoprotein FAD-binding domain CVS41_RS09025 PF00266 Aminotransferase class-V CVS41_RS09030 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CVS41_RS09035 PF00793 DAHP synthetase I family CVS41_RS09040 PF00672 HAMP domain CVS41_RS09040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS09045 PF04055 Radical SAM superfamily CVS41_RS09050 PF00270 DEAD/DEAH box helicase CVS41_RS09050 PF00271 Helicase conserved C-terminal domain CVS41_RS09055 PF00255 Glutathione peroxidase CVS41_RS09065 PF07478 D-ala D-ala ligase C-terminus CVS41_RS09065 PF01820 D-ala D-ala ligase N-terminus CVS41_RS09070 PF09261 Alpha mannosidase middle domain CVS41_RS09070 PF01074 Glycosyl hydrolases family 38 N-terminal domain CVS41_RS09070 PF07748 Glycosyl hydrolases family 38 C-terminal domain CVS41_RS09075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CVS41_RS09075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CVS41_RS09075 PF02378 Phosphotransferase system, EIIC CVS41_RS09080 PF00392 Bacterial regulatory proteins, gntR family CVS41_RS09080 PF07702 UTRA domain CVS41_RS09085 PF13742 OB-fold nucleic acid binding domain CVS41_RS09085 PF02601 Exonuclease VII, large subunit CVS41_RS09090 PF03423 Carbohydrate binding domain (family 25) CVS41_RS09090 PF01373 Glycosyl hydrolase family 14 CVS41_RS09090 PF00128 Alpha amylase, catalytic domain CVS41_RS09105 PF00571 CBS domain CVS41_RS09105 PF00478 IMP dehydrogenase / GMP reductase domain CVS41_RS09110 PF00117 Glutamine amidotransferase class-I CVS41_RS09110 PF02540 NAD synthase CVS41_RS09110 PF00958 GMP synthase C terminal domain CVS41_RS09130 PF12833 Helix-turn-helix domain CVS41_RS09130 PF02805 Metal binding domain of Ada CVS41_RS09130 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CVS41_RS09130 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CVS41_RS09145 PF05724 Thiopurine S-methyltransferase (TPMT) CVS41_RS09150 PF16187 Middle or third domain of peptidase_M16 CVS41_RS09150 PF05193 Peptidase M16 inactive domain CVS41_RS09150 PF00675 Insulinase (Peptidase family M16) CVS41_RS09155 PF00300 Histidine phosphatase superfamily (branch 1) CVS41_RS09165 PF00892 EamA-like transporter family CVS41_RS09170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS41_RS09175 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CVS41_RS09180 PF02559 CarD-like/TRCF domain CVS41_RS09180 PF17757 UvrB interaction domain CVS41_RS09180 PF03461 TRCF domain CVS41_RS09180 PF00270 DEAD/DEAH box helicase CVS41_RS09180 PF00271 Helicase conserved C-terminal domain CVS41_RS09190 PF02687 FtsX-like permease family CVS41_RS09190 PF12704 MacB-like periplasmic core domain CVS41_RS09195 PF00005 ABC transporter CVS41_RS09200 PF02687 FtsX-like permease family CVS41_RS09200 PF12704 MacB-like periplasmic core domain CVS41_RS09220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CVS41_RS09220 PF05697 Bacterial trigger factor protein (TF) CVS41_RS09220 PF05698 Bacterial trigger factor protein (TF) C-terminus CVS41_RS09225 PF00574 Clp protease CVS41_RS09230 PF06689 ClpX C4-type zinc finger CVS41_RS09230 PF10431 C-terminal, D2-small domain, of ClpB protein CVS41_RS09230 PF07724 AAA domain (Cdc48 subfamily) CVS41_RS09235 PF00004 ATPase family associated with various cellular activities (AAA) CVS41_RS09235 PF02190 ATP-dependent protease La (LON) substrate-binding domain CVS41_RS09235 PF05362 Lon protease (S16) C-terminal proteolytic domain CVS41_RS09240 PF00216 Bacterial DNA-binding protein CVS41_RS09245 PF13145 PPIC-type PPIASE domain CVS41_RS09250 PF00005 ABC transporter CVS41_RS09250 PF12848 ABC transporter CVS41_RS09255 PF00474 Sodium:solute symporter family CVS41_RS09260 PF04341 Protein of unknown function, DUF485 CVS41_RS09275 PF00378 Enoyl-CoA hydratase/isomerase CVS41_RS09280 PF01235 Sodium:alanine symporter family CVS41_RS09290 PF06167 Glucose-regulated metallo-peptidase M90 CVS41_RS09310 PF01266 FAD dependent oxidoreductase CVS41_RS09315 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS09320 PF00005 ABC transporter CVS41_RS09330 PF07702 UTRA domain CVS41_RS09330 PF00392 Bacterial regulatory proteins, gntR family CVS41_RS09335 PF00266 Aminotransferase class-V CVS41_RS09340 PF00202 Aminotransferase class-III CVS41_RS09360 PF03918 Cytochrome C biogenesis protein CVS41_RS09365 PF08534 Redoxin CVS41_RS09370 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CVS41_RS09370 PF01578 Cytochrome C assembly protein CVS41_RS09375 PF03916 Polysulphide reductase, NrfD CVS41_RS09380 PF00037 4Fe-4S binding domain CVS41_RS09380 PF13247 4Fe-4S dicluster domain CVS41_RS09385 PF13435 Cytochrome c554 and c-prime CVS41_RS09385 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) CVS41_RS09390 PF02335 Cytochrome c552 CVS41_RS09400 PF13183 4Fe-4S dicluster domain CVS41_RS09400 PF02754 Cysteine-rich domain CVS41_RS09405 PF00890 FAD binding domain CVS41_RS09410 PF01266 FAD dependent oxidoreductase CVS41_RS09410 PF04324 BFD-like [2Fe-2S] binding domain CVS41_RS09415 PF02810 SEC-C motif CVS41_RS09420 PF17200 Single Cache domain 2 CVS41_RS09420 PF00672 HAMP domain CVS41_RS09420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS09425 PF01047 MarR family CVS41_RS09425 PF00480 ROK family CVS41_RS09430 PF03942 DTW domain CVS41_RS09435 PF01925 Sulfite exporter TauE/SafE CVS41_RS09440 PF03466 LysR substrate binding domain CVS41_RS09440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS09450 PF12833 Helix-turn-helix domain CVS41_RS09450 PF14525 AraC-binding-like domain CVS41_RS09455 PF11398 Protein of unknown function (DUF2813) CVS41_RS09465 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CVS41_RS09465 PF00128 Alpha amylase, catalytic domain CVS41_RS09490 PF02789 Cytosol aminopeptidase family, N-terminal domain CVS41_RS09490 PF00883 Cytosol aminopeptidase family, catalytic domain CVS41_RS09495 PF13419 Haloacid dehalogenase-like hydrolase CVS41_RS09510 PF01207 Dihydrouridine synthase (Dus) CVS41_RS09515 PF04304 Protein of unknown function (DUF454) CVS41_RS09520 PF00156 Phosphoribosyl transferase domain CVS41_RS09525 PF12169 DNA polymerase III subunits gamma and tau domain III CVS41_RS09525 PF12170 DNA polymerase III tau subunit V interacting with alpha CVS41_RS09525 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CVS41_RS09530 PF02575 YbaB/EbfC DNA-binding family CVS41_RS09540 PF01261 Xylose isomerase-like TIM barrel CVS41_RS09545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS09545 PF03466 LysR substrate binding domain CVS41_RS09555 PF03279 Bacterial lipid A biosynthesis acyltransferase CVS41_RS09560 PF03279 Bacterial lipid A biosynthesis acyltransferase CVS41_RS09575 PF17151 Periplasmic sensor domain CVS41_RS09575 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS09585 PF00136 DNA polymerase family B CVS41_RS09585 PF03104 DNA polymerase family B, exonuclease domain CVS41_RS09600 PF01863 Protein of unknown function DUF45 CVS41_RS09615 PF03606 C4-dicarboxylate anaerobic carrier CVS41_RS09630 PF01266 FAD dependent oxidoreductase CVS41_RS09630 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CVS41_RS09635 PF00109 Beta-ketoacyl synthase, N-terminal domain CVS41_RS09635 PF02801 Beta-ketoacyl synthase, C-terminal domain CVS41_RS09645 PF06826 Predicted Permease Membrane Region CVS41_RS09645 PF02080 TrkA-C domain CVS41_RS09660 PF02151 UvrB/uvrC motif CVS41_RS09660 PF12344 Ultra-violet resistance protein B CVS41_RS09660 PF00271 Helicase conserved C-terminal domain CVS41_RS09660 PF17757 UvrB interaction domain CVS41_RS09660 PF04851 Type III restriction enzyme, res subunit CVS41_RS09670 PF09335 SNARE associated Golgi protein CVS41_RS09675 PF02600 Disulfide bond formation protein DsbB CVS41_RS09680 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CVS41_RS09685 PF07840 FadR C-terminal domain CVS41_RS09685 PF00392 Bacterial regulatory proteins, gntR family CVS41_RS09695 PF07152 YaeQ protein CVS41_RS09710 PF13188 PAS domain CVS41_RS09710 PF02954 Bacterial regulatory protein, Fis family CVS41_RS09710 PF00158 Sigma-54 interaction domain CVS41_RS09740 PF01554 MatE CVS41_RS09745 PF06786 Uncharacterised protein family (UPF0253) CVS41_RS09755 PF00677 Lumazine binding domain CVS41_RS09765 PF13419 Haloacid dehalogenase-like hydrolase CVS41_RS09770 PF01370 NAD dependent epimerase/dehydratase family CVS41_RS09770 PF02222 ATP-grasp domain CVS41_RS09775 PF00892 EamA-like transporter family CVS41_RS09780 PF02525 Flavodoxin-like fold CVS41_RS09805 PF13509 S1 domain CVS41_RS09805 PF17783 CvfB-like winged helix domain CVS41_RS09815 PF04269 Protein of unknown function, DUF440 CVS41_RS09820 PF00912 Transglycosylase CVS41_RS09825 PF04269 Protein of unknown function, DUF440 CVS41_RS09830 PF03776 Septum formation topological specificity factor MinE CVS41_RS09835 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CVS41_RS09840 PF03775 Septum formation inhibitor MinC, C-terminal domain CVS41_RS09840 PF05209 Septum formation inhibitor MinC, N-terminal domain CVS41_RS09845 PF05166 YcgL domain CVS41_RS09850 PF03315 Serine dehydratase beta chain CVS41_RS09850 PF03313 Serine dehydratase alpha chain CVS41_RS09860 PF03315 Serine dehydratase beta chain CVS41_RS09860 PF03313 Serine dehydratase alpha chain CVS41_RS09865 PF06865 Pyrimidine/purine nucleoside phosphorylase CVS41_RS09870 PF00375 Sodium:dicarboxylate symporter family CVS41_RS09875 PF00365 Phosphofructokinase CVS41_RS09880 PF00121 Triosephosphate isomerase CVS41_RS09885 PF02698 DUF218 domain CVS41_RS09890 PF13847 Methyltransferase domain CVS41_RS09895 PF17192 MukF middle domain CVS41_RS09895 PF03882 MukF winged-helix domain CVS41_RS09895 PF17193 MukF C-terminal domain CVS41_RS09900 PF04288 MukE-like family CVS41_RS09905 PF16330 MukB hinge domain CVS41_RS09905 PF04310 MukB N-terminal CVS41_RS09910 PF05036 Sporulation related domain CVS41_RS09910 PF03330 Lytic transglycolase CVS41_RS09925 PF01327 Polypeptide deformylase CVS41_RS09960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CVS41_RS09960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CVS41_RS09965 PF00291 Pyridoxal-phosphate dependent enzyme CVS41_RS09970 PF01546 Peptidase family M20/M25/M40 CVS41_RS09970 PF07687 Peptidase dimerisation domain CVS41_RS09975 PF01979 Amidohydrolase family CVS41_RS09980 PF00696 Amino acid kinase family CVS41_RS09985 PF07690 Major Facilitator Superfamily CVS41_RS09990 PF00005 ABC transporter CVS41_RS09995 PF01032 FecCD transport family CVS41_RS10005 PF00892 EamA-like transporter family CVS41_RS10010 PF01699 Sodium/calcium exchanger protein CVS41_RS10015 PF13478 XdhC Rossmann domain CVS41_RS10015 PF02625 XdhC and CoxI family CVS41_RS10025 PF12804 MobA-like NTP transferase domain CVS41_RS10030 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS41_RS10030 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CVS41_RS10035 PF01979 Amidohydrolase family CVS41_RS10040 PF00941 FAD binding domain in molybdopterin dehydrogenase CVS41_RS10045 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CVS41_RS10045 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CVS41_RS10045 PF01799 [2Fe-2S] binding domain CVS41_RS10050 PF00860 Permease family CVS41_RS10055 PF01979 Amidohydrolase family CVS41_RS10060 PF00860 Permease family CVS41_RS10065 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CVS41_RS10065 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CVS41_RS10070 PF00941 FAD binding domain in molybdopterin dehydrogenase CVS41_RS10070 PF03450 CO dehydrogenase flavoprotein C-terminal domain CVS41_RS10075 PF01799 [2Fe-2S] binding domain CVS41_RS10075 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS41_RS10080 PF05433 Glycine zipper 2TM domain CVS41_RS10095 PF13193 AMP-binding enzyme C-terminal domain CVS41_RS10095 PF00501 AMP-binding enzyme CVS41_RS10100 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS10100 PF08448 PAS fold CVS41_RS10110 PF01502 Phosphoribosyl-AMP cyclohydrolase CVS41_RS10110 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CVS41_RS10115 PF00977 Histidine biosynthesis protein CVS41_RS10120 PF00977 Histidine biosynthesis protein CVS41_RS10125 PF00117 Glutamine amidotransferase class-I CVS41_RS10130 PF00475 Imidazoleglycerol-phosphate dehydratase CVS41_RS10130 PF08645 Polynucleotide kinase 3 phosphatase CVS41_RS10135 PF00155 Aminotransferase class I and II CVS41_RS10140 PF00815 Histidinol dehydrogenase CVS41_RS10145 PF08029 HisG, C-terminal domain CVS41_RS10145 PF01634 ATP phosphoribosyltransferase CVS41_RS10155 PF13307 Helicase C-terminal domain CVS41_RS10155 PF04851 Type III restriction enzyme, res subunit CVS41_RS10160 PF00814 Glycoprotease family CVS41_RS10170 PF12697 Alpha/beta hydrolase family CVS41_RS10175 PF13193 AMP-binding enzyme C-terminal domain CVS41_RS10175 PF00501 AMP-binding enzyme CVS41_RS10180 PF01612 3'-5' exonuclease CVS41_RS10180 PF00570 HRDC domain CVS41_RS10185 PF00753 Metallo-beta-lactamase superfamily CVS41_RS10195 PF00586 AIR synthase related protein, N-terminal domain CVS41_RS10195 PF02769 AIR synthase related protein, C-terminal domain CVS41_RS10210 PF10672 S-adenosylmethionine-dependent methyltransferase CVS41_RS10210 PF17785 PUA-like domain CVS41_RS10215 PF07196 Flagellin hook IN motif CVS41_RS10215 PF00669 Bacterial flagellin N-terminal helical region CVS41_RS10215 PF00700 Bacterial flagellin C-terminal helical region CVS41_RS10225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS10225 PF12729 Four helix bundle sensory module for signal transduction CVS41_RS10225 PF00672 HAMP domain CVS41_RS10230 PF00708 Acylphosphatase CVS41_RS10240 PF01588 Putative tRNA binding domain CVS41_RS10240 PF09334 tRNA synthetases class I (M) CVS41_RS10240 PF08264 Anticodon-binding domain of tRNA CVS41_RS10245 PF10609 NUBPL iron-transfer P-loop NTPase CVS41_RS10250 PF00485 Phosphoribulokinase / Uridine kinase family CVS41_RS10255 PF00692 dUTPase CVS41_RS10260 PF01384 Phosphate transporter family CVS41_RS10265 PF06945 Protein of unknown function (DUF1289) CVS41_RS10270 PF06725 3D domain CVS41_RS10270 PF03562 MltA specific insert domain CVS41_RS10275 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS41_RS10280 PF00268 Ribonucleotide reductase, small chain CVS41_RS10285 PF02867 Ribonucleotide reductase, barrel domain CVS41_RS10285 PF00317 Ribonucleotide reductase, all-alpha domain CVS41_RS10285 PF03477 ATP cone domain CVS41_RS10290 PF13419 Haloacid dehalogenase-like hydrolase CVS41_RS10300 PF03989 DNA gyrase C-terminal domain, beta-propeller CVS41_RS10300 PF00521 DNA gyrase/topoisomerase IV, subunit A CVS41_RS10305 PF00128 Alpha amylase, catalytic domain CVS41_RS10320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CVS41_RS10320 PF03129 Anticodon binding domain CVS41_RS10320 PF02824 TGS domain CVS41_RS10320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CVS41_RS10325 PF00707 Translation initiation factor IF-3, C-terminal domain CVS41_RS10325 PF05198 Translation initiation factor IF-3, N-terminal domain CVS41_RS10330 PF01632 Ribosomal protein L35 CVS41_RS10335 PF00453 Ribosomal protein L20 CVS41_RS10340 PF01409 tRNA synthetases class II core domain (F) CVS41_RS10340 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CVS41_RS10345 PF03484 tRNA synthetase B5 domain CVS41_RS10345 PF03483 B3/4 domain CVS41_RS10345 PF03147 Ferredoxin-fold anticodon binding domain CVS41_RS10345 PF01588 Putative tRNA binding domain CVS41_RS10345 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CVS41_RS10350 PF00216 Bacterial DNA-binding protein CVS41_RS10355 PF00072 Response regulator receiver domain CVS41_RS10355 PF09456 RcsC Alpha-Beta-Loop (ABL) CVS41_RS10355 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS10355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS10370 PF02146 Sir2 family CVS41_RS10380 PF03707 Bacterial signalling protein N terminal repeat CVS41_RS10380 PF00563 EAL domain CVS41_RS10380 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS10385 PF00356 Bacterial regulatory proteins, lacI family CVS41_RS10390 PF00294 pfkB family carbohydrate kinase CVS41_RS10395 PF13407 Periplasmic binding protein domain CVS41_RS10400 PF02653 Branched-chain amino acid transport system / permease component CVS41_RS10405 PF00005 ABC transporter CVS41_RS10410 PF05025 RbsD / FucU transport protein family CVS41_RS10415 PF02798 Glutathione S-transferase, N-terminal domain CVS41_RS10415 PF00043 Glutathione S-transferase, C-terminal domain CVS41_RS10425 PF13416 Bacterial extracellular solute-binding protein CVS41_RS10430 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS10435 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS10440 PF08402 TOBE domain CVS41_RS10440 PF00005 ABC transporter CVS41_RS10455 PF01171 PP-loop family CVS41_RS10460 PF00582 Universal stress protein family CVS41_RS10465 PF00027 Cyclic nucleotide-binding domain CVS41_RS10465 PF13545 Crp-like helix-turn-helix domain CVS41_RS10480 PF00403 Heavy-metal-associated domain CVS41_RS10490 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS41_RS10490 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CVS41_RS10505 PF00115 Cytochrome C and Quinol oxidase polypeptide I CVS41_RS10515 PF13185 GAF domain CVS41_RS10520 PF04352 ProQ/FINO family CVS41_RS10520 PF17516 ProQ C-terminal domain CVS41_RS10525 PF11818 C-terminal domain of tail specific protease (DUF3340) CVS41_RS10525 PF00595 PDZ domain CVS41_RS10525 PF17804 Tail specific protease N-terminal domain CVS41_RS10525 PF03572 Peptidase family S41 CVS41_RS10530 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CVS41_RS10530 PF11940 Domain of unknown function (DUF3458) Ig-like fold CVS41_RS10530 PF01433 Peptidase family M1 domain CVS41_RS10540 PF05088 Bacterial NAD-glutamate dehydrogenase CVS41_RS10545 PF01180 Dihydroorotate dehydrogenase CVS41_RS10550 PF07126 Cell-division protein ZapC CVS41_RS10560 PF01197 Ribosomal protein L31 CVS41_RS10565 PF00444 Ribosomal protein L36 CVS41_RS10570 PF01170 Putative RNA methylase family UPF0020 CVS41_RS10570 PF02926 THUMP domain CVS41_RS10570 PF10672 S-adenosylmethionine-dependent methyltransferase CVS41_RS10580 PF16326 ABC transporter C-terminal domain CVS41_RS10580 PF12848 ABC transporter CVS41_RS10580 PF00005 ABC transporter CVS41_RS10585 PF04957 Ribosome modulation factor CVS41_RS10590 PF07977 FabA-like domain CVS41_RS10595 PF05362 Lon protease (S16) C-terminal proteolytic domain CVS41_RS10595 PF13654 AAA domain CVS41_RS10620 PF07130 YebG protein CVS41_RS10625 PF01674 Lipase (class 2) CVS41_RS10630 PF00106 short chain dehydrogenase CVS41_RS10655 PF06974 Protein of unknown function (DUF1298) CVS41_RS10655 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CVS41_RS10670 PF03972 MmgE/PrpD family CVS41_RS10675 PF00285 Citrate synthase, C-terminal domain CVS41_RS10690 PF04403 Paraquat-inducible protein A CVS41_RS10695 PF02470 MlaD protein CVS41_RS10700 PF01189 16S rRNA methyltransferase RsmB/F CVS41_RS10700 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CVS41_RS10700 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CVS41_RS10710 PF00589 Phage integrase family CVS41_RS10715 PF01026 TatD related DNase CVS41_RS10720 PF09115 DNA polymerase III, delta subunit, C terminal CVS41_RS10725 PF02223 Thymidylate kinase CVS41_RS10730 PF02618 YceG-like family CVS41_RS10735 PF01063 Amino-transferase class IV CVS41_RS10740 PF00109 Beta-ketoacyl synthase, N-terminal domain CVS41_RS10740 PF02801 Beta-ketoacyl synthase, C-terminal domain CVS41_RS10745 PF00550 Phosphopantetheine attachment site CVS41_RS10755 PF00698 Acyl transferase domain CVS41_RS10760 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CVS41_RS10760 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CVS41_RS10765 PF02504 Fatty acid synthesis protein CVS41_RS10770 PF01783 Ribosomal L32p protein family CVS41_RS10775 PF02620 Large ribosomal RNA subunit accumulation protein YceD CVS41_RS10780 PF02545 Maf-like protein CVS41_RS10785 PF13419 Haloacid dehalogenase-like hydrolase CVS41_RS10790 PF00849 RNA pseudouridylate synthase CVS41_RS10790 PF01479 S4 domain CVS41_RS10795 PF12111 Polyribonucleotide phosphorylase C terminal CVS41_RS10795 PF00575 S1 RNA binding domain CVS41_RS10795 PF10150 Ribonuclease E/G family CVS41_RS10800 PF02378 Phosphotransferase system, EIIC CVS41_RS10800 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CVS41_RS10805 PF00294 pfkB family carbohydrate kinase CVS41_RS10810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CVS41_RS10810 PF00381 PTS HPr component phosphorylation site CVS41_RS10815 PF00356 Bacterial regulatory proteins, lacI family CVS41_RS10815 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CVS41_RS10820 PF03222 Tryptophan/tyrosine permease family CVS41_RS10850 PF00270 DEAD/DEAH box helicase CVS41_RS10850 PF00271 Helicase conserved C-terminal domain CVS41_RS10860 PF01264 Chorismate synthase CVS41_RS10865 PF05175 Methyltransferase small domain CVS41_RS10870 PF01713 Smr domain CVS41_RS10875 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS10875 PF08448 PAS fold CVS41_RS10880 PF00300 Histidine phosphatase superfamily (branch 1) CVS41_RS10890 PF00704 Glycosyl hydrolases family 18 CVS41_RS10890 PF08329 Chitinase A, N-terminal domain CVS41_RS10900 PF03831 PhnA domain CVS41_RS10900 PF08274 PhnA Zinc-Ribbon CVS41_RS10965 PF04715 Anthranilate synthase component I, N terminal region CVS41_RS10965 PF00425 chorismate binding enzyme CVS41_RS10970 PF00293 NUDIX domain CVS41_RS10975 PF03222 Tryptophan/tyrosine permease family CVS41_RS10985 PF00375 Sodium:dicarboxylate symporter family CVS41_RS10990 PF00570 HRDC domain CVS41_RS10990 PF16124 RecQ zinc-binding CVS41_RS10990 PF00271 Helicase conserved C-terminal domain CVS41_RS10990 PF00270 DEAD/DEAH box helicase CVS41_RS10990 PF09382 RQC domain CVS41_RS10995 PF06798 PrkA serine protein kinase C-terminal domain CVS41_RS10995 PF08298 PrkA AAA domain CVS41_RS11000 PF04285 Protein of unknown function (DUF444) CVS41_RS11005 PF04293 SpoVR like protein CVS41_RS11010 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS41_RS11010 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS41_RS11010 PF00378 Enoyl-CoA hydratase/isomerase CVS41_RS11015 PF02803 Thiolase, C-terminal domain CVS41_RS11015 PF00108 Thiolase, N-terminal domain CVS41_RS11020 PF17863 AAA lid domain CVS41_RS11020 PF07726 ATPase family associated with various cellular activities (AAA) CVS41_RS11025 PF01882 Protein of unknown function DUF58 CVS41_RS11040 PF13519 von Willebrand factor type A domain CVS41_RS11050 PF08281 Sigma-70, region 4 CVS41_RS11050 PF04542 Sigma-70 region 2 CVS41_RS11060 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CVS41_RS11065 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CVS41_RS11070 PF00563 EAL domain CVS41_RS11070 PF08668 HDOD domain CVS41_RS11075 PF00108 Thiolase, N-terminal domain CVS41_RS11075 PF02803 Thiolase, C-terminal domain CVS41_RS11080 PF09278 MerR, DNA binding CVS41_RS11080 PF00376 MerR family regulatory protein CVS41_RS11085 PF01386 Ribosomal L25p family CVS41_RS11095 PF00270 DEAD/DEAH box helicase CVS41_RS11095 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CVS41_RS11095 PF04408 Helicase associated domain (HA2) CVS41_RS11095 PF00271 Helicase conserved C-terminal domain CVS41_RS11095 PF11898 Domain of unknown function (DUF3418) CVS41_RS11100 PF01743 Poly A polymerase head domain CVS41_RS11100 PF01368 DHH family CVS41_RS11100 PF00571 CBS domain CVS41_RS11100 PF02272 DHHA1 domain CVS41_RS11105 PF01966 HD domain CVS41_RS11110 PF00884 Sulfatase CVS41_RS11115 PF07726 ATPase family associated with various cellular activities (AAA) CVS41_RS11115 PF17863 AAA lid domain CVS41_RS11130 PF13519 von Willebrand factor type A domain CVS41_RS11130 PF07584 Aerotolerance regulator N-terminal CVS41_RS11135 PF13519 von Willebrand factor type A domain CVS41_RS11135 PF07584 Aerotolerance regulator N-terminal CVS41_RS11145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS11145 PF03466 LysR substrate binding domain CVS41_RS11150 PF03781 Sulfatase-modifying factor enzyme 1 CVS41_RS11160 PF04055 Radical SAM superfamily CVS41_RS11160 PF13186 Iron-sulfur cluster-binding domain CVS41_RS11175 PF06480 FtsH Extracellular CVS41_RS11175 PF01434 Peptidase family M41 CVS41_RS11175 PF17862 AAA+ lid domain CVS41_RS11175 PF00004 ATPase family associated with various cellular activities (AAA) CVS41_RS11185 PF00889 Elongation factor TS CVS41_RS11220 PF08411 Exonuclease C-terminal CVS41_RS11220 PF00929 Exonuclease CVS41_RS11235 PF03788 LrgA family CVS41_RS11240 PF04172 LrgB-like family CVS41_RS11245 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CVS41_RS11245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CVS41_RS11250 PF01212 Beta-eliminating lyase CVS41_RS11260 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CVS41_RS11265 PF01266 FAD dependent oxidoreductase CVS41_RS11270 PF01118 Semialdehyde dehydrogenase, NAD binding domain CVS41_RS11270 PF02774 Semialdehyde dehydrogenase, dimerisation domain CVS41_RS11275 PF02634 FdhD/NarQ family CVS41_RS11280 PF02954 Bacterial regulatory protein, Fis family CVS41_RS11280 PF01590 GAF domain CVS41_RS11280 PF00158 Sigma-54 interaction domain CVS41_RS11295 PF12800 4Fe-4S binding domain CVS41_RS11295 PF13247 4Fe-4S dicluster domain CVS41_RS11315 PF00583 Acetyltransferase (GNAT) family CVS41_RS11320 PF01609 Transposase DDE domain CVS41_RS11325 PF02705 K+ potassium transporter CVS41_RS11330 PF00037 4Fe-4S binding domain CVS41_RS11330 PF12798 4Fe-4S binding domain CVS41_RS11335 PF00361 Proton-conducting membrane transporter CVS41_RS11340 PF00146 NADH dehydrogenase CVS41_RS11345 PF00374 Nickel-dependent hydrogenase CVS41_RS11345 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CVS41_RS11345 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CVS41_RS11350 PF12838 4Fe-4S dicluster domain CVS41_RS11355 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CVS41_RS11360 PF07450 Formate hydrogenlyase maturation protein HycH CVS41_RS11365 PF01750 Hydrogenase maturation protease CVS41_RS11370 PF03841 L-seryl-tRNA selenium transferase CVS41_RS11370 PF12390 Selenocysteine synthase N terminal CVS41_RS11375 PF00009 Elongation factor Tu GTP binding domain CVS41_RS11375 PF03144 Elongation factor Tu domain 2 CVS41_RS11375 PF09105 Elongation factor SelB, winged helix CVS41_RS11375 PF09107 Elongation factor SelB, winged helix CVS41_RS11375 PF09106 Elongation factor SelB, winged helix CVS41_RS11380 PF01300 Telomere recombination CVS41_RS11380 PF00708 Acylphosphatase CVS41_RS11380 PF07503 HypF finger CVS41_RS11380 PF17788 HypF Kae1-like domain CVS41_RS11385 PF01455 HupF/HypC family CVS41_RS11390 PF01924 Hydrogenase formation hypA family CVS41_RS11395 PF00586 AIR synthase related protein, N-terminal domain CVS41_RS11395 PF02769 AIR synthase related protein, C-terminal domain CVS41_RS11400 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CVS41_RS11405 PF02492 CobW/HypB/UreG, nucleotide-binding domain CVS41_RS11410 PF00005 ABC transporter CVS41_RS11415 PF00005 ABC transporter CVS41_RS11420 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS41_RS11420 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS11425 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS11430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS41_RS11435 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE CVS41_RS11440 PF01750 Hydrogenase maturation protease CVS41_RS11445 PF00374 Nickel-dependent hydrogenase CVS41_RS11450 PF03916 Polysulphide reductase, NrfD CVS41_RS11455 PF13247 4Fe-4S dicluster domain CVS41_RS11460 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CVS41_RS11460 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CVS41_RS11465 PF00563 EAL domain CVS41_RS11465 PF01590 GAF domain CVS41_RS11465 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS11465 PF00360 Phytochrome region CVS41_RS11470 PF00534 Glycosyl transferases group 1 CVS41_RS11470 PF00862 Sucrose synthase CVS41_RS11475 PF00534 Glycosyl transferases group 1 CVS41_RS11475 PF13439 Glycosyltransferase Family 4 CVS41_RS11540 PF13439 Glycosyltransferase Family 4 CVS41_RS11540 PF00534 Glycosyl transferases group 1 CVS41_RS11545 PF07238 PilZ domain CVS41_RS11545 PF03552 Cellulose synthase CVS41_RS11545 PF00535 Glycosyl transferase family 2 CVS41_RS11550 PF02397 Bacterial sugar transferase CVS41_RS11555 PF00534 Glycosyl transferases group 1 CVS41_RS11560 PF00072 Response regulator receiver domain CVS41_RS11560 PF00211 Adenylate and Guanylate cyclase catalytic domain CVS41_RS11590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS11590 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS11590 PF09308 LuxQ, periplasmic CVS41_RS11590 PF00072 Response regulator receiver domain CVS41_RS11605 PF01925 Sulfite exporter TauE/SafE CVS41_RS11610 PF13520 Amino acid permease CVS41_RS11620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CVS41_RS11620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CVS41_RS11625 PF00378 Enoyl-CoA hydratase/isomerase CVS41_RS11630 PF00378 Enoyl-CoA hydratase/isomerase CVS41_RS11635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS41_RS11635 PF02770 Acyl-CoA dehydrogenase, middle domain CVS41_RS11635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS41_RS11640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS41_RS11640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS41_RS11640 PF02770 Acyl-CoA dehydrogenase, middle domain CVS41_RS11645 PF01039 Carboxyl transferase domain CVS41_RS11650 PF00378 Enoyl-CoA hydratase/isomerase CVS41_RS11655 PF00289 Biotin carboxylase, N-terminal domain CVS41_RS11655 PF02785 Biotin carboxylase C-terminal domain CVS41_RS11655 PF00364 Biotin-requiring enzyme CVS41_RS11655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS41_RS11660 PF00682 HMGL-like CVS41_RS11665 PF09278 MerR, DNA binding CVS41_RS11665 PF00376 MerR family regulatory protein CVS41_RS11680 PF01184 GPR1/FUN34/yaaH family CVS41_RS11690 PF02629 CoA binding domain CVS41_RS11690 PF00549 CoA-ligase CVS41_RS11695 PF00549 CoA-ligase CVS41_RS11695 PF08442 ATP-grasp domain CVS41_RS11700 PF02817 e3 binding domain CVS41_RS11700 PF00364 Biotin-requiring enzyme CVS41_RS11700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CVS41_RS11705 PF16078 2-oxoglutarate dehydrogenase N-terminus CVS41_RS11705 PF00676 Dehydrogenase E1 component CVS41_RS11705 PF02779 Transketolase, pyrimidine binding domain CVS41_RS11705 PF16870 2-oxoglutarate dehydrogenase C-terminal CVS41_RS11710 PF13085 2Fe-2S iron-sulfur cluster binding domain CVS41_RS11715 PF00890 FAD binding domain CVS41_RS11715 PF02910 Fumarate reductase flavoprotein C-term CVS41_RS11720 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CVS41_RS11725 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CVS41_RS11730 PF00285 Citrate synthase, C-terminal domain CVS41_RS11740 PF13673 Acetyltransferase (GNAT) domain CVS41_RS11755 PF00465 Iron-containing alcohol dehydrogenase CVS41_RS11760 PF08543 Phosphomethylpyrimidine kinase CVS41_RS11785 PF00005 ABC transporter CVS41_RS11785 PF00664 ABC transporter transmembrane region CVS41_RS11790 PF00005 ABC transporter CVS41_RS11790 PF00664 ABC transporter transmembrane region CVS41_RS11795 PF00672 HAMP domain CVS41_RS11795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS11795 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS11795 PF01627 Hpt domain CVS41_RS11795 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CVS41_RS11795 PF00072 Response regulator receiver domain CVS41_RS11800 PF00085 Thioredoxin CVS41_RS11805 PF00939 Sodium:sulfate symporter transmembrane region CVS41_RS11810 PF00343 Carbohydrate phosphorylase CVS41_RS11825 PF03692 Putative zinc- or iron-chelating domain CVS41_RS11835 PF01228 Glycine radical CVS41_RS11835 PF02901 Pyruvate formate lyase-like CVS41_RS11840 PF01226 Formate/nitrite transporter CVS41_RS11845 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CVS41_RS11845 PF18381 YcaO cyclodehydratase C-terminal domain CVS41_RS11850 PF00232 Glycosyl hydrolase family 1 CVS41_RS11855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS11855 PF03466 LysR substrate binding domain CVS41_RS11865 PF08267 Cobalamin-independent synthase, N-terminal domain CVS41_RS11865 PF01717 Cobalamin-independent synthase, Catalytic domain CVS41_RS11870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS11870 PF03466 LysR substrate binding domain CVS41_RS11875 PF03466 LysR substrate binding domain CVS41_RS11875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS11880 PF00857 Isochorismatase family CVS41_RS11885 PF05726 Pirin C-terminal cupin domain CVS41_RS11885 PF02678 Pirin CVS41_RS11890 PF07690 Major Facilitator Superfamily CVS41_RS11895 PF03466 LysR substrate binding domain CVS41_RS11895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS11900 PF03466 LysR substrate binding domain CVS41_RS11900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS11905 PF13460 NAD(P)H-binding CVS41_RS11915 PF01053 Cys/Met metabolism PLP-dependent enzyme CVS41_RS11920 PF00501 AMP-binding enzyme CVS41_RS11925 PF08891 YfcL protein CVS41_RS11935 PF03741 Integral membrane protein TerC family CVS41_RS11940 PF00691 OmpA family CVS41_RS11945 PF17152 Periplasmic sensor domain CVS41_RS11945 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS11955 PF00158 Sigma-54 interaction domain CVS41_RS11955 PF18024 Helix-turn-helix domain CVS41_RS11960 PF01329 Pterin 4 alpha carbinolamine dehydratase CVS41_RS11965 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CVS41_RS11970 PF00171 Aldehyde dehydrogenase family CVS41_RS11975 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS11980 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS11985 PF00005 ABC transporter CVS41_RS11985 PF08402 TOBE domain CVS41_RS11990 PF13416 Bacterial extracellular solute-binding protein CVS41_RS11995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS11995 PF03466 LysR substrate binding domain CVS41_RS12000 PF05128 Domain of unknown function (DUF697) CVS41_RS12005 PF04317 YcjX-like family, DUF463 CVS41_RS12015 PF06667 Phage shock protein B CVS41_RS12020 PF04012 PspA/IM30 family CVS41_RS12025 PF00158 Sigma-54 interaction domain CVS41_RS12025 PF02954 Bacterial regulatory protein, Fis family CVS41_RS12030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS41_RS12035 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS12040 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS12040 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS41_RS12045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS41_RS12045 PF00005 ABC transporter CVS41_RS12050 PF00005 ABC transporter CVS41_RS12055 PF00183 Hsp90 protein CVS41_RS12055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS12060 PF02132 RecR protein CVS41_RS12060 PF13662 Toprim domain CVS41_RS12070 PF10722 Putative bacterial sensory transduction regulator CVS41_RS12080 PF00265 Thymidine kinase CVS41_RS12085 PF03553 Na+/H+ antiporter family CVS41_RS12090 PF00816 H-NS histone family CVS41_RS12095 PF01923 Cobalamin adenosyltransferase CVS41_RS12100 PF12843 Putative quorum-sensing-regulated virulence factor CVS41_RS12105 PF04055 Radical SAM superfamily CVS41_RS12110 PF06508 Queuosine biosynthesis protein QueC CVS41_RS12125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CVS41_RS12130 PF18073 Rubredoxin metal binding domain CVS41_RS12140 PF00216 Bacterial DNA-binding protein CVS41_RS12145 PF00575 S1 RNA binding domain CVS41_RS12150 PF02224 Cytidylate kinase CVS41_RS12155 PF00925 GTP cyclohydrolase II CVS41_RS12160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS12160 PF03466 LysR substrate binding domain CVS41_RS12165 PF03466 LysR substrate binding domain CVS41_RS12165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS12170 PF07690 Major Facilitator Superfamily CVS41_RS12185 PF00881 Nitroreductase family CVS41_RS12190 PF03806 AbgT putative transporter family CVS41_RS12195 PF13188 PAS domain CVS41_RS12195 PF03707 Bacterial signalling protein N terminal repeat CVS41_RS12195 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS12195 PF00563 EAL domain CVS41_RS12200 PF03466 LysR substrate binding domain CVS41_RS12200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS12205 PF00072 Response regulator receiver domain CVS41_RS12215 PF01212 Beta-eliminating lyase CVS41_RS12220 PF00106 short chain dehydrogenase CVS41_RS12230 PF00248 Aldo/keto reductase family CVS41_RS12235 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CVS41_RS12245 PF00005 ABC transporter CVS41_RS12250 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS12255 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS41_RS12260 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS12265 PF03411 Penicillin-insensitive murein endopeptidase CVS41_RS12275 PF04536 TPM domain CVS41_RS12290 PF01618 MotA/TolQ/ExbB proton channel family CVS41_RS12295 PF00691 OmpA family CVS41_RS12295 PF13677 Membrane MotB of proton-channel complex MotA/MotB CVS41_RS12300 PF07715 TonB-dependent Receptor Plug Domain CVS41_RS12300 PF00593 TonB dependent receptor CVS41_RS12305 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CVS41_RS12305 PF00326 Prolyl oligopeptidase family CVS41_RS12325 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CVS41_RS12330 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CVS41_RS12335 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CVS41_RS12335 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CVS41_RS12345 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CVS41_RS12345 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CVS41_RS12350 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CVS41_RS12350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CVS41_RS12350 PF00384 Molybdopterin oxidoreductase CVS41_RS12355 PF00146 NADH dehydrogenase CVS41_RS12360 PF12838 4Fe-4S dicluster domain CVS41_RS12365 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CVS41_RS12370 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CVS41_RS12375 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CVS41_RS12375 PF00361 Proton-conducting membrane transporter CVS41_RS12380 PF00361 Proton-conducting membrane transporter CVS41_RS12385 PF00361 Proton-conducting membrane transporter CVS41_RS12395 PF00072 Response regulator receiver domain CVS41_RS12400 PF01966 HD domain CVS41_RS12405 PF02769 AIR synthase related protein, C-terminal domain CVS41_RS12405 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CVS41_RS12405 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CVS41_RS12410 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS41_RS12410 PF01464 Transglycosylase SLT domain CVS41_RS12420 PF07191 zinc-ribbons CVS41_RS12425 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CVS41_RS12425 PF01926 50S ribosome-binding GTPase CVS41_RS12430 PF13360 PQQ-like domain CVS41_RS12435 PF09976 Tetratricopeptide repeat-like domain CVS41_RS12440 PF13393 Histidyl-tRNA synthetase CVS41_RS12440 PF03129 Anticodon binding domain CVS41_RS12445 PF04551 GcpE protein CVS41_RS12450 PF13464 Domain of unknown function (DUF4115) CVS41_RS12460 PF04055 Radical SAM superfamily CVS41_RS12465 PF00334 Nucleoside diphosphate kinase CVS41_RS12470 PF12404 Peptidase CVS41_RS12470 PF00883 Cytosol aminopeptidase family, catalytic domain CVS41_RS12475 PF00883 Cytosol aminopeptidase family, catalytic domain CVS41_RS12475 PF12404 Peptidase CVS41_RS12480 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS41_RS12485 PF00012 Hsp70 protein CVS41_RS12490 PF00226 DnaJ domain CVS41_RS12490 PF07743 HSCB C-terminal oligomerisation domain CVS41_RS12495 PF01521 Iron-sulphur cluster biosynthesis CVS41_RS12500 PF01592 NifU-like N terminal domain CVS41_RS12505 PF00266 Aminotransferase class-V CVS41_RS12510 PF02082 Transcriptional regulator CVS41_RS12515 PF00588 SpoU rRNA Methylase family CVS41_RS12525 PF02036 SCP-2 sterol transfer family CVS41_RS12530 PF01136 Peptidase family U32 CVS41_RS12535 PF01136 Peptidase family U32 CVS41_RS12540 PF07719 Tetratricopeptide repeat CVS41_RS12540 PF13181 Tetratricopeptide repeat CVS41_RS12550 PF07549 SecD/SecF GG Motif CVS41_RS12550 PF02355 Protein export membrane protein CVS41_RS12555 PF07549 SecD/SecF GG Motif CVS41_RS12555 PF02355 Protein export membrane protein CVS41_RS12555 PF13721 SecD export protein N-terminal TM region CVS41_RS12560 PF02699 Preprotein translocase subunit CVS41_RS12565 PF01702 Queuine tRNA-ribosyltransferase CVS41_RS12570 PF02547 Queuosine biosynthesis protein CVS41_RS12575 PF00571 CBS domain CVS41_RS12580 PF00578 AhpC/TSA family CVS41_RS12580 PF10417 C-terminal domain of 1-Cys peroxiredoxin CVS41_RS12585 PF13192 Thioredoxin domain CVS41_RS12585 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS41_RS12630 PF00005 ABC transporter CVS41_RS12630 PF00664 ABC transporter transmembrane region CVS41_RS12630 PF03412 Peptidase C39 family CVS41_RS12635 PF04055 Radical SAM superfamily CVS41_RS12635 PF16199 Radical_SAM C-terminal domain CVS41_RS12640 PF04898 Glutamate synthase central domain CVS41_RS12640 PF01645 Conserved region in glutamate synthase CVS41_RS12640 PF01493 GXGXG motif CVS41_RS12640 PF00310 Glutamine amidotransferases class-II CVS41_RS12645 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CVS41_RS12645 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS41_RS12660 PF00270 DEAD/DEAH box helicase CVS41_RS12660 PF00271 Helicase conserved C-terminal domain CVS41_RS12675 PF07670 Nucleoside recognition CVS41_RS12675 PF07664 Ferrous iron transport protein B C terminus CVS41_RS12675 PF02421 Ferrous iron transport protein B CVS41_RS12685 PF01253 Translation initiation factor SUI1 CVS41_RS12690 PF01169 Uncharacterized protein family UPF0016 CVS41_RS12735 PF01406 tRNA synthetases class I (C) catalytic domain CVS41_RS12735 PF09190 DALR domain CVS41_RS12740 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CVS41_RS12750 PF00149 Calcineurin-like phosphoesterase CVS41_RS12760 PF04226 Transglycosylase associated protein CVS41_RS12765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS12765 PF08521 Two-component sensor kinase N-terminal CVS41_RS12765 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS12770 PF00486 Transcriptional regulatory protein, C terminal CVS41_RS12770 PF00072 Response regulator receiver domain CVS41_RS12785 PF01970 Tripartite tricarboxylate transporter TctA family CVS41_RS12790 PF02798 Glutathione S-transferase, N-terminal domain CVS41_RS12790 PF14497 Glutathione S-transferase, C-terminal domain CVS41_RS12800 PF04209 homogentisate 1,2-dioxygenase CVS41_RS12805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS41_RS12815 PF00849 RNA pseudouridylate synthase CVS41_RS12820 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS12825 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS12830 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS41_RS12835 PF00005 ABC transporter CVS41_RS12840 PF03956 Lysine exporter LysO CVS41_RS12845 PF01979 Amidohydrolase family CVS41_RS12850 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS41_RS12855 PF04336 Acyl carrier protein phosphodiesterase CVS41_RS12865 PF03960 ArsC family CVS41_RS12870 PF00578 AhpC/TSA family CVS41_RS12875 PF01435 Peptidase family M48 CVS41_RS12875 PF13181 Tetratricopeptide repeat CVS41_RS12885 PF01594 AI-2E family transporter CVS41_RS12895 PF00561 alpha/beta hydrolase fold CVS41_RS12900 PF03976 Polyphosphate kinase 2 (PPK2) CVS41_RS12905 PF08402 TOBE domain CVS41_RS12905 PF00005 ABC transporter CVS41_RS12910 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS12915 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS12915 PF14785 Maltose transport system permease protein MalF P2 domain CVS41_RS12920 PF01547 Bacterial extracellular solute-binding protein CVS41_RS12925 PF04245 37-kD nucleoid-associated bacterial protein CVS41_RS12930 PF07208 Protein of unknown function (DUF1414) CVS41_RS12935 PF00884 Sulfatase CVS41_RS12935 PF11893 Domain of unknown function (DUF3413) CVS41_RS12940 PF03180 NLPA lipoprotein CVS41_RS12945 PF01483 Proprotein convertase P-domain CVS41_RS12945 PF00082 Subtilase family CVS41_RS12955 PF02896 PEP-utilising enzyme, TIM barrel domain CVS41_RS12955 PF00391 PEP-utilising enzyme, mobile domain CVS41_RS12955 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CVS41_RS12960 PF03618 Kinase/pyrophosphorylase CVS41_RS12970 PF00324 Amino acid permease CVS41_RS12985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS12985 PF08447 PAS fold CVS41_RS12990 PF02347 Glycine cleavage system P-protein CVS41_RS12995 PF01597 Glycine cleavage H-protein CVS41_RS13000 PF08669 Glycine cleavage T-protein C-terminal barrel domain CVS41_RS13000 PF01571 Aminomethyltransferase folate-binding domain CVS41_RS13005 PF01494 FAD binding domain CVS41_RS13010 PF01494 FAD binding domain CVS41_RS13015 PF03695 Uncharacterised protein family (UPF0149) CVS41_RS13020 PF05164 Cell division protein ZapA CVS41_RS13030 PF07690 Major Facilitator Superfamily CVS41_RS13035 PF00043 Glutathione S-transferase, C-terminal domain CVS41_RS13035 PF02798 Glutathione S-transferase, N-terminal domain CVS41_RS13045 PF00459 Inositol monophosphatase family CVS41_RS13050 PF00672 HAMP domain CVS41_RS13050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS13060 PF00691 OmpA family CVS41_RS13060 PF18393 MotY N-terminal domain CVS41_RS13085 PF13609 Gram-negative porin CVS41_RS13090 PF13307 Helicase C-terminal domain CVS41_RS13090 PF06733 DEAD_2 CVS41_RS13100 PF00850 Histone deacetylase domain CVS41_RS13105 PF01926 50S ribosome-binding GTPase CVS41_RS13110 PF00245 Alkaline phosphatase CVS41_RS13115 PF00245 Alkaline phosphatase CVS41_RS13130 PF01272 Transcription elongation factor, GreA/GreB, C-term CVS41_RS13130 PF14760 Rnk N-terminus CVS41_RS13135 PF00196 Bacterial regulatory proteins, luxR family CVS41_RS13135 PF00072 Response regulator receiver domain CVS41_RS13140 PF05231 MASE1 CVS41_RS13140 PF07730 Histidine kinase CVS41_RS13140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS13145 PF07690 Major Facilitator Superfamily CVS41_RS13150 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS13150 PF08448 PAS fold CVS41_RS13155 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS41_RS13160 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS13165 PF00005 ABC transporter CVS41_RS13175 PF04116 Fatty acid hydroxylase superfamily CVS41_RS13180 PF13520 Amino acid permease CVS41_RS13185 PF00809 Pterin binding enzyme CVS41_RS13185 PF02965 Vitamin B12 dependent methionine synthase, activation domain CVS41_RS13185 PF02607 B12 binding domain CVS41_RS13185 PF02574 Homocysteine S-methyltransferase CVS41_RS13185 PF02310 B12 binding domain CVS41_RS13195 PF03471 Transporter associated domain CVS41_RS13195 PF01595 Cyclin M transmembrane N-terminal domain CVS41_RS13195 PF00571 CBS domain CVS41_RS13200 PF01895 PhoU domain CVS41_RS13205 PF00005 ABC transporter CVS41_RS13210 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS13215 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS13220 PF14437 MafB19-like deaminase CVS41_RS13230 PF01274 Malate synthase CVS41_RS13235 PF00463 Isocitrate lyase family CVS41_RS13240 PF00308 Bacterial dnaA protein CVS41_RS13255 PF02769 AIR synthase related protein, C-terminal domain CVS41_RS13255 PF00586 AIR synthase related protein, N-terminal domain CVS41_RS13260 PF00551 Formyl transferase CVS41_RS13265 PF01784 NIF3 (NGG1p interacting factor 3) CVS41_RS13270 PF02954 Bacterial regulatory protein, Fis family CVS41_RS13270 PF00158 Sigma-54 interaction domain CVS41_RS13270 PF00072 Response regulator receiver domain CVS41_RS13275 PF13188 PAS domain CVS41_RS13275 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS13275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS13280 PF02954 Bacterial regulatory protein, Fis family CVS41_RS13280 PF00158 Sigma-54 interaction domain CVS41_RS13280 PF06490 Flagellar regulatory protein FleQ CVS41_RS13290 PF01842 ACT domain CVS41_RS13295 PF13089 Polyphosphate kinase N-terminal domain CVS41_RS13295 PF02503 Polyphosphate kinase middle domain CVS41_RS13295 PF13090 Polyphosphate kinase C-terminal domain 2 CVS41_RS13295 PF17941 Polyphosphate kinase C-terminal domain 1 CVS41_RS13300 PF02541 Ppx/GppA phosphatase family CVS41_RS13305 PF03448 MgtE intracellular N domain CVS41_RS13305 PF00571 CBS domain CVS41_RS13305 PF01769 Divalent cation transporter CVS41_RS13310 PF00669 Bacterial flagellin N-terminal helical region CVS41_RS13315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CVS41_RS13315 PF07196 Flagellin hook IN motif CVS41_RS13320 PF10135 Rod binding protein CVS41_RS13320 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CVS41_RS13325 PF02119 Flagellar P-ring protein CVS41_RS13330 PF02107 Flagellar L-ring protein CVS41_RS13335 PF00460 Flagella basal body rod protein CVS41_RS13335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CVS41_RS13340 PF00460 Flagella basal body rod protein CVS41_RS13340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CVS41_RS13345 PF07559 Flagellar basal body protein FlaE CVS41_RS13345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CVS41_RS13345 PF00460 Flagella basal body rod protein CVS41_RS13350 PF13861 FlgD Tudor-like domain CVS41_RS13350 PF13860 FlgD Ig-like domain CVS41_RS13350 PF03963 Flagellar hook capping protein - N-terminal region CVS41_RS13355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CVS41_RS13355 PF00460 Flagella basal body rod protein CVS41_RS13360 PF00460 Flagella basal body rod protein CVS41_RS13365 PF01739 CheR methyltransferase, SAM binding domain CVS41_RS13365 PF03705 CheR methyltransferase, all-alpha domain CVS41_RS13370 PF00072 Response regulator receiver domain CVS41_RS13370 PF01584 CheW-like domain CVS41_RS13375 PF13144 Chaperone for flagella basal body P-ring formation CVS41_RS13390 PF12850 Calcineurin-like phosphoesterase superfamily domain CVS41_RS13395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS41_RS13405 PF01479 S4 domain CVS41_RS13405 PF00849 RNA pseudouridylate synthase CVS41_RS13410 PF01966 HD domain CVS41_RS13420 PF00923 Transaldolase/Fructose-6-phosphate aldolase CVS41_RS13425 PF04055 Radical SAM superfamily CVS41_RS13430 PF01228 Glycine radical CVS41_RS13430 PF02901 Pyruvate formate lyase-like CVS41_RS13435 PF08220 DeoR-like helix-turn-helix domain CVS41_RS13435 PF00455 DeoR C terminal sensor domain CVS41_RS13440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS41_RS13465 PF00313 'Cold-shock' DNA-binding domain CVS41_RS13470 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CVS41_RS13470 PF00364 Biotin-requiring enzyme CVS41_RS13470 PF02817 e3 binding domain CVS41_RS13475 PF02779 Transketolase, pyrimidine binding domain CVS41_RS13475 PF02780 Transketolase, C-terminal domain CVS41_RS13480 PF00676 Dehydrogenase E1 component CVS41_RS13490 PF00501 AMP-binding enzyme CVS41_RS13490 PF00668 Condensation domain CVS41_RS13490 PF00550 Phosphopantetheine attachment site CVS41_RS13490 PF00975 Thioesterase domain CVS41_RS13500 PF00550 Phosphopantetheine attachment site CVS41_RS13500 PF00857 Isochorismatase family CVS41_RS13505 PF13193 AMP-binding enzyme C-terminal domain CVS41_RS13505 PF00501 AMP-binding enzyme CVS41_RS13510 PF00425 chorismate binding enzyme CVS41_RS13515 PF00593 TonB dependent receptor CVS41_RS13515 PF07715 TonB-dependent Receptor Plug Domain CVS41_RS13520 PF00793 DAHP synthetase I family CVS41_RS13525 PF00356 Bacterial regulatory proteins, lacI family CVS41_RS13530 PF01464 Transglycosylase SLT domain CVS41_RS13530 PF14718 Soluble lytic murein transglycosylase L domain CVS41_RS13535 PF00563 EAL domain CVS41_RS13535 PF03707 Bacterial signalling protein N terminal repeat CVS41_RS13535 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS13540 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CVS41_RS13560 PF04357 TamB, inner membrane protein subunit of TAM complex CVS41_RS13565 PF17243 POTRA domain TamA domain 1 CVS41_RS13565 PF07244 Surface antigen variable number repeat CVS41_RS13565 PF01103 Surface antigen CVS41_RS13585 PF02627 Carboxymuconolactone decarboxylase family CVS41_RS13590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS41_RS13590 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS41_RS13590 PF00403 Heavy-metal-associated domain CVS41_RS13595 PF13416 Bacterial extracellular solute-binding protein CVS41_RS13605 PF00005 ABC transporter CVS41_RS13610 PF01066 CDP-alcohol phosphatidyltransferase CVS41_RS13615 PF13406 Transglycosylase SLT domain CVS41_RS13620 PF01047 MarR family CVS41_RS13630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CVS41_RS13630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CVS41_RS13630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CVS41_RS13630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CVS41_RS13635 PF17206 SeqA protein N-terminal domain CVS41_RS13635 PF03925 SeqA protein C-terminal domain CVS41_RS13640 PF12697 Alpha/beta hydrolase family CVS41_RS13650 PF01402 Ribbon-helix-helix protein, copG family CVS41_RS13655 PF00258 Flavodoxin CVS41_RS13665 PF01475 Ferric uptake regulator family CVS41_RS13670 PF00749 tRNA synthetases class I (E and Q), catalytic domain CVS41_RS13670 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CVS41_RS13675 PF02838 Glycosyl hydrolase family 20, domain 2 CVS41_RS13675 PF00728 Glycosyl hydrolase family 20, catalytic domain CVS41_RS13675 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain CVS41_RS13675 PF03173 Putative carbohydrate binding domain CVS41_RS13680 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CVS41_RS13680 PF00367 phosphotransferase system, EIIB CVS41_RS13680 PF02378 Phosphotransferase system, EIIC CVS41_RS13685 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CVS41_RS13690 PF01979 Amidohydrolase family CVS41_RS13695 PF01047 MarR family CVS41_RS13695 PF00480 ROK family CVS41_RS13700 PF08019 Phosphoethanolamine transferase EptA/EptB CVS41_RS13700 PF00884 Sulfatase CVS41_RS13705 PF01966 HD domain CVS41_RS13710 PF07694 5TMR of 5TMR-LYT CVS41_RS13710 PF06580 Histidine kinase CVS41_RS13715 PF04397 LytTr DNA-binding domain CVS41_RS13715 PF00072 Response regulator receiver domain CVS41_RS13720 PF02554 Carbon starvation protein CstA CVS41_RS13725 PF11742 Protein of unknown function (DUF3302) CVS41_RS13730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS41_RS13730 PF00529 HlyD membrane-fusion protein of T1SS CVS41_RS13735 PF00271 Helicase conserved C-terminal domain CVS41_RS13735 PF04851 Type III restriction enzyme, res subunit CVS41_RS13740 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CVS41_RS13745 PF00462 Glutaredoxin CVS41_RS13750 PF03372 Endonuclease/Exonuclease/phosphatase family CVS41_RS13760 PF03061 Thioesterase superfamily CVS41_RS13765 PF01370 NAD dependent epimerase/dehydratase family CVS41_RS13770 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CVS41_RS13770 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CVS41_RS13770 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CVS41_RS13770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS41_RS13770 PF10371 Domain of unknown function CVS41_RS13775 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS41_RS13775 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CVS41_RS13775 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CVS41_RS13785 PF03476 MOSC N-terminal beta barrel domain CVS41_RS13785 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS41_RS13785 PF03473 MOSC domain CVS41_RS13785 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS41_RS13785 PF03473 MOSC domain CVS41_RS13785 PF03476 MOSC N-terminal beta barrel domain CVS41_RS13795 PF01435 Peptidase family M48 CVS41_RS13805 PF08241 Methyltransferase domain CVS41_RS13805 PF12697 Alpha/beta hydrolase family CVS41_RS13810 PF00155 Aminotransferase class I and II CVS41_RS13815 PF04055 Radical SAM superfamily CVS41_RS13815 PF06968 Biotin and Thiamin Synthesis associated domain CVS41_RS13820 PF00202 Aminotransferase class-III CVS41_RS13835 PF00152 tRNA synthetases class II (D, K and N) CVS41_RS13835 PF01336 OB-fold nucleic acid binding domain CVS41_RS13845 PF03605 Anaerobic c4-dicarboxylate membrane transporter CVS41_RS13855 PF07687 Peptidase dimerisation domain CVS41_RS13855 PF01546 Peptidase family M20/M25/M40 CVS41_RS13860 PF03606 C4-dicarboxylate anaerobic carrier CVS41_RS13870 PF03960 ArsC family CVS41_RS13875 PF07687 Peptidase dimerisation domain CVS41_RS13875 PF01546 Peptidase family M20/M25/M40 CVS41_RS13880 PF02557 D-alanyl-D-alanine carboxypeptidase CVS41_RS13890 PF03471 Transporter associated domain CVS41_RS13890 PF02080 TrkA-C domain CVS41_RS13890 PF00999 Sodium/hydrogen exchanger family CVS41_RS13900 PF03471 Transporter associated domain CVS41_RS13900 PF02080 TrkA-C domain CVS41_RS13900 PF00999 Sodium/hydrogen exchanger family CVS41_RS13905 PF01810 LysE type translocator CVS41_RS13910 PF12729 Four helix bundle sensory module for signal transduction CVS41_RS13910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS13910 PF00672 HAMP domain CVS41_RS13915 PF07509 Protein of unknown function (DUF1523) CVS41_RS13935 PF01156 Inosine-uridine preferring nucleoside hydrolase CVS41_RS13940 PF00849 RNA pseudouridylate synthase CVS41_RS13945 PF01048 Phosphorylase superfamily CVS41_RS13950 PF00465 Iron-containing alcohol dehydrogenase CVS41_RS13955 PF04355 SmpA / OmlA family CVS41_RS13960 PF13460 NAD(P)H-binding CVS41_RS13970 PF03099 Biotin/lipoate A/B protein ligase family CVS41_RS13970 PF10437 Bacterial lipoate protein ligase C-terminus CVS41_RS13975 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS13975 PF03707 Bacterial signalling protein N terminal repeat CVS41_RS13975 PF00563 EAL domain CVS41_RS13980 PF12704 MacB-like periplasmic core domain CVS41_RS13980 PF02687 FtsX-like permease family CVS41_RS13980 PF00005 ABC transporter CVS41_RS13985 PF02687 FtsX-like permease family CVS41_RS13985 PF00005 ABC transporter CVS41_RS13985 PF12704 MacB-like periplasmic core domain CVS41_RS13990 PF00005 ABC transporter CVS41_RS13990 PF12704 MacB-like periplasmic core domain CVS41_RS13990 PF02687 FtsX-like permease family CVS41_RS13995 PF00529 HlyD membrane-fusion protein of T1SS CVS41_RS13995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS41_RS14000 PF00873 AcrB/AcrD/AcrF family CVS41_RS14015 PF04143 Sulphur transport CVS41_RS14030 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS41_RS14040 PF02308 MgtC family CVS41_RS14045 PF13407 Periplasmic binding protein domain CVS41_RS14045 PF00356 Bacterial regulatory proteins, lacI family CVS41_RS14050 PF00251 Glycosyl hydrolases family 32 N-terminal domain CVS41_RS14050 PF08244 Glycosyl hydrolases family 32 C terminal CVS41_RS14055 PF02378 Phosphotransferase system, EIIC CVS41_RS14055 PF00367 phosphotransferase system, EIIB CVS41_RS14060 PF00294 pfkB family carbohydrate kinase CVS41_RS14065 PF11471 Maltoporin periplasmic N-terminal extension CVS41_RS14065 PF02264 LamB porin CVS41_RS14070 PF00684 DnaJ central domain CVS41_RS14070 PF00226 DnaJ domain CVS41_RS14070 PF01556 DnaJ C terminal domain CVS41_RS14075 PF00012 Hsp70 protein CVS41_RS14080 PF01025 GrpE CVS41_RS14085 PF01513 ATP-NAD kinase CVS41_RS14090 PF02463 RecF/RecN/SMC N terminal domain CVS41_RS14100 PF01368 DHH family CVS41_RS14100 PF02833 DHHA2 domain CVS41_RS14105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS41_RS14110 PF12704 MacB-like periplasmic core domain CVS41_RS14110 PF00005 ABC transporter CVS41_RS14110 PF02687 FtsX-like permease family CVS41_RS14115 PF02321 Outer membrane efflux protein CVS41_RS14120 PF00816 H-NS histone family CVS41_RS14130 PF06082 Exopolysaccharide biosynthesis protein YbjH CVS41_RS14150 PF02706 Chain length determinant protein CVS41_RS14150 PF13807 G-rich domain on putative tyrosine kinase CVS41_RS14150 PF13614 AAA domain CVS41_RS14155 PF01451 Low molecular weight phosphotyrosine protein phosphatase CVS41_RS14160 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CVS41_RS14160 PF02563 Polysaccharide biosynthesis/export protein CVS41_RS14160 PF10531 SLBB domain CVS41_RS14170 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CVS41_RS14170 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CVS41_RS14170 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CVS41_RS14175 PF01370 NAD dependent epimerase/dehydratase family CVS41_RS14180 PF00534 Glycosyl transferases group 1 CVS41_RS14190 PF13439 Glycosyltransferase Family 4 CVS41_RS14190 PF00534 Glycosyl transferases group 1 CVS41_RS14195 PF00534 Glycosyl transferases group 1 CVS41_RS14195 PF13439 Glycosyltransferase Family 4 CVS41_RS14210 PF00132 Bacterial transferase hexapeptide (six repeats) CVS41_RS14215 PF01943 Polysaccharide biosynthesis protein CVS41_RS14220 PF00953 Glycosyl transferase family 4 CVS41_RS14225 PF02719 Polysaccharide biosynthesis protein CVS41_RS14230 PF00953 Glycosyl transferase family 4 CVS41_RS14235 PF01370 NAD dependent epimerase/dehydratase family CVS41_RS14250 PF02350 UDP-N-acetylglucosamine 2-epimerase CVS41_RS14260 PF00005 ABC transporter CVS41_RS14270 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CVS41_RS14275 PF00483 Nucleotidyl transferase CVS41_RS14285 PF04321 RmlD substrate binding domain CVS41_RS14290 PF16363 GDP-mannose 4,6 dehydratase CVS41_RS14295 PF00873 AcrB/AcrD/AcrF family CVS41_RS14300 PF00529 HlyD membrane-fusion protein of T1SS CVS41_RS14300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS41_RS14305 PF00440 Bacterial regulatory proteins, tetR family CVS41_RS14305 PF08361 MAATS-type transcriptional repressor, C-terminal region CVS41_RS14320 PF02001 Protein of unknown function DUF134 CVS41_RS14335 PF00072 Response regulator receiver domain CVS41_RS14340 PF18693 TRAM domain CVS41_RS14340 PF04055 Radical SAM superfamily CVS41_RS14340 PF00919 Uncharacterized protein family UPF0004 CVS41_RS14360 PF14821 Threonine synthase N terminus CVS41_RS14360 PF00291 Pyridoxal-phosphate dependent enzyme CVS41_RS14365 PF08544 GHMP kinases C terminal CVS41_RS14365 PF00288 GHMP kinases N terminal domain CVS41_RS14370 PF00742 Homoserine dehydrogenase CVS41_RS14370 PF03447 Homoserine dehydrogenase, NAD binding domain CVS41_RS14370 PF13840 ACT domain CVS41_RS14370 PF01842 ACT domain CVS41_RS14370 PF00696 Amino acid kinase family CVS41_RS14380 PF00588 SpoU rRNA Methylase family CVS41_RS14385 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CVS41_RS14395 PF00849 RNA pseudouridylate synthase CVS41_RS14395 PF01479 S4 domain CVS41_RS14400 PF04079 Segregation and condensation complex subunit ScpB CVS41_RS14405 PF02616 Segregation and condensation protein ScpA CVS41_RS14410 PF01300 Telomere recombination CVS41_RS14415 PF02811 PHP domain CVS41_RS14420 PF00425 chorismate binding enzyme CVS41_RS14420 PF04715 Anthranilate synthase component I, N terminal region CVS41_RS14425 PF00117 Glutamine amidotransferase class-I CVS41_RS14425 PF00591 Glycosyl transferase family, a/b domain CVS41_RS14425 PF02885 Glycosyl transferase family, helical bundle domain CVS41_RS14430 PF02885 Glycosyl transferase family, helical bundle domain CVS41_RS14430 PF00591 Glycosyl transferase family, a/b domain CVS41_RS14435 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CVS41_RS14435 PF00218 Indole-3-glycerol phosphate synthase CVS41_RS14440 PF00291 Pyridoxal-phosphate dependent enzyme CVS41_RS14445 PF00290 Tryptophan synthase alpha chain CVS41_RS14460 PF04307 LexA-binding, inner membrane-associated putative hydrolase CVS41_RS14480 PF07662 Na+ dependent nucleoside transporter C-terminus CVS41_RS14480 PF01773 Na+ dependent nucleoside transporter N-terminus CVS41_RS14480 PF07670 Nucleoside recognition CVS41_RS14485 PF03960 ArsC family CVS41_RS14490 PF01758 Sodium Bile acid symporter family CVS41_RS14495 PF02374 Anion-transporting ATPase CVS41_RS14500 PF06953 Arsenical resistance operon trans-acting repressor ArsD CVS41_RS14505 PF01022 Bacterial regulatory protein, arsR family CVS41_RS14520 PF03737 Aldolase/RraA CVS41_RS14530 PF00486 Transcriptional regulatory protein, C terminal CVS41_RS14530 PF00072 Response regulator receiver domain CVS41_RS14545 PF00664 ABC transporter transmembrane region CVS41_RS14545 PF00005 ABC transporter CVS41_RS14550 PF00005 ABC transporter CVS41_RS14550 PF00664 ABC transporter transmembrane region CVS41_RS14570 PF18389 TrmO C-terminal domain CVS41_RS14570 PF01980 tRNA-methyltransferase O CVS41_RS14575 PF01292 Prokaryotic cytochrome b561 CVS41_RS14585 PF00072 Response regulator receiver domain CVS41_RS14585 PF00486 Transcriptional regulatory protein, C terminal CVS41_RS14590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS14595 PF03350 Uncharacterized protein family, UPF0114 CVS41_RS14610 PF01266 FAD dependent oxidoreductase CVS41_RS14615 PF07883 Cupin domain CVS41_RS14615 PF01381 Helix-turn-helix CVS41_RS14620 PF00171 Aldehyde dehydrogenase family CVS41_RS14625 PF00202 Aminotransferase class-III CVS41_RS14630 PF00324 Amino acid permease CVS41_RS14640 PF00324 Amino acid permease CVS41_RS14645 PF02690 Na+/Pi-cotransporter CVS41_RS14650 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CVS41_RS14650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CVS41_RS14660 PF04381 Putative exonuclease, RdgC CVS41_RS14670 PF12320 Type 5 capsule protein repressor C-terminal domain CVS41_RS14670 PF00149 Calcineurin-like phosphoesterase CVS41_RS14675 PF13476 AAA domain CVS41_RS14690 PF02887 Pyruvate kinase, alpha/beta domain CVS41_RS14690 PF00224 Pyruvate kinase, barrel domain CVS41_RS14695 PF00924 Mechanosensitive ion channel CVS41_RS14695 PF12795 Mechanosensitive ion channel porin domain CVS41_RS14695 PF12794 Mechanosensitive ion channel inner membrane domain 1 CVS41_RS14705 PF01431 Peptidase family M13 CVS41_RS14705 PF05649 Peptidase family M13 CVS41_RS14710 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS14715 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CVS41_RS14720 PF05524 PEP-utilising enzyme, N-terminal CVS41_RS14720 PF02896 PEP-utilising enzyme, TIM barrel domain CVS41_RS14720 PF00391 PEP-utilising enzyme, mobile domain CVS41_RS14725 PF00381 PTS HPr component phosphorylation site CVS41_RS14730 PF00291 Pyridoxal-phosphate dependent enzyme CVS41_RS14735 PF00004 ATPase family associated with various cellular activities (AAA) CVS41_RS14735 PF17862 AAA+ lid domain CVS41_RS14735 PF01434 Peptidase family M41 CVS41_RS14745 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CVS41_RS14745 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CVS41_RS14750 PF00672 HAMP domain CVS41_RS14750 PF01966 HD domain CVS41_RS14755 PF13401 AAA domain CVS41_RS14755 PF01471 Putative peptidoglycan binding domain CVS41_RS14760 PF16537 Type II secretion system protein B CVS41_RS14765 PF11356 Type II secretion system protein C CVS41_RS14770 PF03958 Bacterial type II/III secretion system short domain CVS41_RS14770 PF00263 Bacterial type II and III secretion system protein CVS41_RS14775 PF00437 Type II/IV secretion system protein CVS41_RS14780 PF00482 Type II secretion system (T2SS), protein F CVS41_RS14785 PF07963 Prokaryotic N-terminal methylation motif CVS41_RS14785 PF08334 Type II secretion system (T2SS), protein G CVS41_RS14790 PF07963 Prokaryotic N-terminal methylation motif CVS41_RS14790 PF12019 Type II transport protein GspH CVS41_RS14795 PF02501 Type II secretion system (T2SS), protein I CVS41_RS14795 PF07963 Prokaryotic N-terminal methylation motif CVS41_RS14800 PF07963 Prokaryotic N-terminal methylation motif CVS41_RS14800 PF11612 Type II secretion system (T2SS), protein J CVS41_RS14805 PF03934 Type II secretion system (T2SS), protein K CVS41_RS14810 PF05134 Type II secretion system (T2SS), protein L CVS41_RS14810 PF12693 GspL periplasmic domain CVS41_RS14815 PF04612 Type II secretion system (T2SS), protein M CVS41_RS14820 PF01203 Type II secretion system (T2SS), protein N CVS41_RS14830 PF01027 Inhibitor of apoptosis-promoting Bax1 CVS41_RS14835 PF12805 FUSC-like inner membrane protein yccS CVS41_RS14840 PF04358 DsrC like protein CVS41_RS14845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CVS41_RS14850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS14850 PF03466 LysR substrate binding domain CVS41_RS14890 PF11842 Domain of unknown function (DUF3362) CVS41_RS14890 PF04055 Radical SAM superfamily CVS41_RS14890 PF08497 Radical SAM N-terminal CVS41_RS14895 PF00873 AcrB/AcrD/AcrF family CVS41_RS14900 PF00529 HlyD membrane-fusion protein of T1SS CVS41_RS14900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS41_RS14905 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS14905 PF17158 Membrane-associated sensor, integral membrane domain CVS41_RS14910 PF01734 Patatin-like phospholipase CVS41_RS14915 PF13520 Amino acid permease CVS41_RS14930 PF01389 OmpA-like transmembrane domain CVS41_RS14930 PF00691 OmpA family CVS41_RS14940 PF01389 OmpA-like transmembrane domain CVS41_RS14940 PF00691 OmpA family CVS41_RS14945 PF00691 OmpA family CVS41_RS14945 PF01389 OmpA-like transmembrane domain CVS41_RS14950 PF03949 Malic enzyme, NAD binding domain CVS41_RS14950 PF00390 Malic enzyme, N-terminal domain CVS41_RS14955 PF12833 Helix-turn-helix domain CVS41_RS14960 PF01554 MatE CVS41_RS14965 PF10692 Protein of unknown function (DUF2498) CVS41_RS14970 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS14975 PF00860 Permease family CVS41_RS14985 PF01235 Sodium:alanine symporter family CVS41_RS14990 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CVS41_RS14990 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CVS41_RS14995 PF01699 Sodium/calcium exchanger protein CVS41_RS15000 PF08534 Redoxin CVS41_RS15000 PF00462 Glutaredoxin CVS41_RS15010 PF00293 NUDIX domain CVS41_RS15025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CVS41_RS15025 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CVS41_RS15030 PF03932 CutC family CVS41_RS15035 PF00480 ROK family CVS41_RS15045 PF01435 Peptidase family M48 CVS41_RS15050 PF12849 PBP superfamily domain CVS41_RS15055 PF00989 PAS fold CVS41_RS15055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS15055 PF11808 Phosphate regulon sensor protein PhoR CVS41_RS15055 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS15060 PF00072 Response regulator receiver domain CVS41_RS15060 PF00486 Transcriptional regulatory protein, C terminal CVS41_RS15065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS41_RS15080 PF00892 EamA-like transporter family CVS41_RS15085 PF00072 Response regulator receiver domain CVS41_RS15085 PF12431 Transcriptional regulator CVS41_RS15090 PF17203 Single cache domain 3 CVS41_RS15090 PF00989 PAS fold CVS41_RS15090 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CVS41_RS15090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS15095 PF03949 Malic enzyme, NAD binding domain CVS41_RS15095 PF00390 Malic enzyme, N-terminal domain CVS41_RS15105 PF01047 MarR family CVS41_RS15110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS41_RS15110 PF00529 HlyD membrane-fusion protein of T1SS CVS41_RS15135 PF01679 Proteolipid membrane potential modulator CVS41_RS15145 PF13597 Anaerobic ribonucleoside-triphosphate reductase CVS41_RS15145 PF03477 ATP cone domain CVS41_RS15155 PF00533 BRCA1 C Terminus (BRCT) domain CVS41_RS15155 PF12826 Helix-hairpin-helix motif CVS41_RS15155 PF01653 NAD-dependent DNA ligase adenylation domain CVS41_RS15155 PF03120 NAD-dependent DNA ligase OB-fold domain CVS41_RS15155 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CVS41_RS15160 PF04354 ZipA, C-terminal FtsZ-binding domain CVS41_RS15165 PF02463 RecF/RecN/SMC N terminal domain CVS41_RS15165 PF06470 SMC proteins Flexible Hinge Domain CVS41_RS15175 PF03458 UPF0126 domain CVS41_RS15185 PF05951 Bacterial protein of unknown function (DUF882) CVS41_RS15190 PF01471 Putative peptidoglycan binding domain CVS41_RS15190 PF03734 L,D-transpeptidase catalytic domain CVS41_RS15205 PF00535 Glycosyl transferase family 2 CVS41_RS15220 PF00128 Alpha amylase, catalytic domain CVS41_RS15230 PF00072 Response regulator receiver domain CVS41_RS15230 PF00196 Bacterial regulatory proteins, luxR family CVS41_RS15250 PF02254 TrkA-N domain CVS41_RS15250 PF02080 TrkA-C domain CVS41_RS15250 PF00999 Sodium/hydrogen exchanger family CVS41_RS15255 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS15260 PF01171 PP-loop family CVS41_RS15260 PF09179 TilS substrate binding domain CVS41_RS15260 PF11734 TilS substrate C-terminal domain CVS41_RS15265 PF01431 Peptidase family M13 CVS41_RS15265 PF05649 Peptidase family M13 CVS41_RS15275 PF08543 Phosphomethylpyrimidine kinase CVS41_RS15280 PF01276 Orn/Lys/Arg decarboxylase, major domain CVS41_RS15280 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CVS41_RS15280 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CVS41_RS15285 PF13520 Amino acid permease CVS41_RS15290 PF00486 Transcriptional regulatory protein, C terminal CVS41_RS15290 PF18500 CadC C-terminal domain 1 CVS41_RS15295 PF13520 Amino acid permease CVS41_RS15300 PF03466 LysR substrate binding domain CVS41_RS15300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS15305 PF12706 Beta-lactamase superfamily domain CVS41_RS15320 PF03466 LysR substrate binding domain CVS41_RS15320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS15330 PF00205 Thiamine pyrophosphate enzyme, central domain CVS41_RS15330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS41_RS15330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS41_RS15335 PF03306 Alpha-acetolactate decarboxylase CVS41_RS15340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS15340 PF03466 LysR substrate binding domain CVS41_RS15345 PF00579 tRNA synthetases class I (W and Y) CVS41_RS15350 PF01551 Peptidase family M23 CVS41_RS15350 PF08525 Opacity-associated protein A N-terminal motif CVS41_RS15350 PF01476 LysM domain CVS41_RS15355 PF03702 Anhydro-N-acetylmuramic acid kinase CVS41_RS15365 PF01042 Endoribonuclease L-PSP CVS41_RS15375 PF01965 DJ-1/PfpI family CVS41_RS15380 PF03466 LysR substrate binding domain CVS41_RS15380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS15385 PF08240 Alcohol dehydrogenase GroES-like domain CVS41_RS15385 PF16197 Ketoacyl-synthetase C-terminal extension CVS41_RS15385 PF00109 Beta-ketoacyl synthase, N-terminal domain CVS41_RS15385 PF02801 Beta-ketoacyl synthase, C-terminal domain CVS41_RS15385 PF08659 KR domain CVS41_RS15385 PF00550 Phosphopantetheine attachment site CVS41_RS15385 PF00698 Acyl transferase domain CVS41_RS15385 PF14765 Polyketide synthase dehydratase CVS41_RS15395 PF02779 Transketolase, pyrimidine binding domain CVS41_RS15395 PF02780 Transketolase, C-terminal domain CVS41_RS15395 PF00456 Transketolase, thiamine diphosphate binding domain CVS41_RS15400 PF02773 S-adenosylmethionine synthetase, C-terminal domain CVS41_RS15400 PF00438 S-adenosylmethionine synthetase, N-terminal domain CVS41_RS15400 PF02772 S-adenosylmethionine synthetase, central domain CVS41_RS15405 PF17283 SprT-like zinc ribbon domain CVS41_RS15405 PF10263 SprT-like family CVS41_RS15410 PF04231 Endonuclease I CVS41_RS15415 PF04452 RNA methyltransferase CVS41_RS15420 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CVS41_RS15420 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CVS41_RS15425 PF02622 Uncharacterized ACR, COG1678 CVS41_RS15430 PF03652 Holliday junction resolvase CVS41_RS15435 PF00854 POT family CVS41_RS15440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS15440 PF03466 LysR substrate binding domain CVS41_RS15445 PF07690 Major Facilitator Superfamily CVS41_RS15450 PF07726 ATPase family associated with various cellular activities (AAA) CVS41_RS15450 PF17863 AAA lid domain CVS41_RS15460 PF01841 Transglutaminase-like superfamily CVS41_RS15460 PF11992 Domain of unknown function (DUF3488) CVS41_RS15460 PF13559 Domain of unknown function (DUF4129) CVS41_RS15465 PF01235 Sodium:alanine symporter family CVS41_RS15470 PF00923 Transaldolase/Fructose-6-phosphate aldolase CVS41_RS15480 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CVS41_RS15485 PF07733 Bacterial DNA polymerase III alpha NTPase domain CVS41_RS15485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CVS41_RS15485 PF14579 Helix-hairpin-helix motif CVS41_RS15485 PF02811 PHP domain CVS41_RS15485 PF01336 OB-fold nucleic acid binding domain CVS41_RS15490 PF01351 Ribonuclease HII CVS41_RS15495 PF02684 Lipid-A-disaccharide synthetase CVS41_RS15500 PF00132 Bacterial transferase hexapeptide (six repeats) CVS41_RS15500 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CVS41_RS15505 PF07977 FabA-like domain CVS41_RS15510 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CVS41_RS15510 PF00132 Bacterial transferase hexapeptide (six repeats) CVS41_RS15515 PF03938 Outer membrane protein (OmpH-like) CVS41_RS15520 PF07244 Surface antigen variable number repeat CVS41_RS15520 PF01103 Surface antigen CVS41_RS15525 PF17820 PDZ domain CVS41_RS15525 PF02163 Peptidase family M50 CVS41_RS15530 PF13288 DXP reductoisomerase C-terminal domain CVS41_RS15530 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CVS41_RS15530 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CVS41_RS15540 PF01255 Putative undecaprenyl diphosphate synthase CVS41_RS15545 PF01765 Ribosome recycling factor CVS41_RS15550 PF00696 Amino acid kinase family CVS41_RS15555 PF00889 Elongation factor TS CVS41_RS15560 PF00318 Ribosomal protein S2 CVS41_RS15565 PF00557 Metallopeptidase family M24 CVS41_RS15570 PF01842 ACT domain CVS41_RS15570 PF08335 GlnD PII-uridylyltransferase CVS41_RS15570 PF01966 HD domain CVS41_RS15570 PF01909 Nucleotidyltransferase domain CVS41_RS15575 PF14602 Hexapeptide repeat of succinyl-transferase CVS41_RS15575 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CVS41_RS15575 PF00132 Bacterial transferase hexapeptide (six repeats) CVS41_RS15580 PF11944 Protein of unknown function (DUF3461) CVS41_RS15585 PF02378 Phosphotransferase system, EIIC CVS41_RS15585 PF00367 phosphotransferase system, EIIB CVS41_RS15590 PF07148 Maltose operon periplasmic protein precursor (MalM) CVS41_RS15595 PF02264 LamB porin CVS41_RS15600 PF00258 Flavodoxin CVS41_RS15605 PF00849 RNA pseudouridylate synthase CVS41_RS15610 PF04287 tRNA pseudouridine synthase C CVS41_RS15635 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) CVS41_RS15640 PF07348 Syd protein (SUKH-2) CVS41_RS15645 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CVS41_RS15645 PF14489 QueF-like protein CVS41_RS15655 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS15660 PF11892 Domain of unknown function (DUF3412) CVS41_RS15660 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CVS41_RS15660 PF03641 Possible lysine decarboxylase CVS41_RS15665 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CVS41_RS15665 PF01367 5'-3' exonuclease, C-terminal SAM fold CVS41_RS15670 PF00180 Isocitrate/isopropylmalate dehydrogenase CVS41_RS15670 PF18324 Hypothetical protein TT1725 CVS41_RS15680 PF01728 FtsJ-like methyltransferase CVS41_RS15680 PF18125 RlmM ferredoxin-like domain CVS41_RS15685 PF04241 Protein of unknown function (DUF423) CVS41_RS15695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS15695 PF03466 LysR substrate binding domain CVS41_RS15700 PF00672 HAMP domain CVS41_RS15700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS15705 PF11799 impB/mucB/samB family C-terminal domain CVS41_RS15705 PF11798 IMS family HHH motif CVS41_RS15705 PF00817 impB/mucB/samB family CVS41_RS15715 PF01965 DJ-1/PfpI family CVS41_RS15720 PF02558 Ketopantoate reductase PanE/ApbA CVS41_RS15720 PF08546 Ketopantoate reductase PanE/ApbA C terminal CVS41_RS15725 PF04461 Protein of unknown function (DUF520) CVS41_RS15730 PF03502 Nucleoside-specific channel-forming protein, Tsx CVS41_RS15735 PF07690 Major Facilitator Superfamily CVS41_RS15740 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CVS41_RS15750 PF05175 Methyltransferase small domain CVS41_RS15755 PF01722 BolA-like protein CVS41_RS15760 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CVS41_RS15760 PF11973 NQRA C-terminal domain CVS41_RS15765 PF03116 NQR2, RnfD, RnfE family CVS41_RS15770 PF04205 FMN-binding domain CVS41_RS15775 PF02508 Rnf-Nqr subunit, membrane protein CVS41_RS15780 PF02508 Rnf-Nqr subunit, membrane protein CVS41_RS15785 PF00970 Oxidoreductase FAD-binding domain CVS41_RS15785 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS41_RS15785 PF00175 Oxidoreductase NAD-binding domain CVS41_RS15790 PF02424 ApbE family CVS41_RS15835 PF00106 short chain dehydrogenase CVS41_RS15845 PF03441 FAD binding domain of DNA photolyase CVS41_RS15845 PF00875 DNA photolyase CVS41_RS15850 PF13411 MerR HTH family regulatory protein CVS41_RS15855 PF08349 Protein of unknown function (DUF1722) CVS41_RS15870 PF06508 Queuosine biosynthesis protein QueC CVS41_RS15885 PF00800 Prephenate dehydratase CVS41_RS15885 PF01817 Chorismate mutase type II CVS41_RS15950 PF00672 HAMP domain CVS41_RS15950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS15960 PF00665 Integrase core domain CVS41_RS15965 PF01695 IstB-like ATP binding protein CVS41_RS15980 PF09588 YqaJ-like viral recombinase domain CVS41_RS16025 PF04002 RadC-like JAB domain CVS41_RS16040 PF02887 Pyruvate kinase, alpha/beta domain CVS41_RS16040 PF00224 Pyruvate kinase, barrel domain CVS41_RS16045 PF07745 Glycosyl hydrolase family 53 CVS41_RS16050 PF02378 Phosphotransferase system, EIIC CVS41_RS16050 PF00367 phosphotransferase system, EIIB CVS41_RS16055 PF08533 Beta-galactosidase C-terminal domain CVS41_RS16055 PF02449 Beta-galactosidase CVS41_RS16055 PF08532 Beta-galactosidase trimerisation domain CVS41_RS16060 PF07745 Glycosyl hydrolase family 53 CVS41_RS16065 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS16070 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS16075 PF13416 Bacterial extracellular solute-binding protein CVS41_RS16080 PF17912 MalK OB fold domain CVS41_RS16080 PF00005 ABC transporter CVS41_RS16085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS16085 PF00672 HAMP domain CVS41_RS16085 PF02743 Cache domain CVS41_RS16095 PF07745 Glycosyl hydrolase family 53 CVS41_RS16100 PF02264 LamB porin CVS41_RS16105 PF00356 Bacterial regulatory proteins, lacI family CVS41_RS16110 PF16363 GDP-mannose 4,6 dehydratase CVS41_RS16115 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CVS41_RS16115 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CVS41_RS16120 PF10509 Galactokinase galactose-binding signature CVS41_RS16120 PF08544 GHMP kinases C terminal CVS41_RS16120 PF00288 GHMP kinases N terminal domain CVS41_RS16160 PF00672 HAMP domain CVS41_RS16160 PF16591 Helical bimodular sensor domain CVS41_RS16160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS16165 PF03573 outer membrane porin, OprD family CVS41_RS16170 PF00106 short chain dehydrogenase CVS41_RS16195 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CVS41_RS16225 PF07963 Prokaryotic N-terminal methylation motif CVS41_RS16225 PF00114 Pilin (bacterial filament) CVS41_RS16230 PF02805 Metal binding domain of Ada CVS41_RS16230 PF00730 HhH-GPD superfamily base excision DNA repair protein CVS41_RS16230 PF06029 AlkA N-terminal domain CVS41_RS16230 PF12833 Helix-turn-helix domain CVS41_RS16235 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CVS41_RS16235 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CVS41_RS16240 PF12392 Collagenase CVS41_RS16240 PF01136 Peptidase family U32 CVS41_RS16245 PF01810 LysE type translocator CVS41_RS16250 PF03466 LysR substrate binding domain CVS41_RS16250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS16255 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CVS41_RS16255 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CVS41_RS16260 PF00672 HAMP domain CVS41_RS16260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS16260 PF02743 Cache domain CVS41_RS16265 PF00072 Response regulator receiver domain CVS41_RS16275 PF07194 P2 response regulator binding domain CVS41_RS16275 PF01627 Hpt domain CVS41_RS16275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS16275 PF02895 Signal transducing histidine kinase, homodimeric domain CVS41_RS16275 PF01584 CheW-like domain CVS41_RS16280 PF12729 Four helix bundle sensory module for signal transduction CVS41_RS16280 PF00672 HAMP domain CVS41_RS16280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS16285 PF01584 CheW-like domain CVS41_RS16290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS16290 PF00672 HAMP domain CVS41_RS16295 PF01739 CheR methyltransferase, SAM binding domain CVS41_RS16295 PF03705 CheR methyltransferase, all-alpha domain CVS41_RS16300 PF03975 CheD chemotactic sensory transduction CVS41_RS16305 PF00072 Response regulator receiver domain CVS41_RS16305 PF01339 CheB methylesterase CVS41_RS16310 PF00013 KH domain CVS41_RS16310 PF00575 S1 RNA binding domain CVS41_RS16310 PF03725 3' exoribonuclease family, domain 2 CVS41_RS16310 PF01138 3' exoribonuclease family, domain 1 CVS41_RS16310 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CVS41_RS16315 PF00312 Ribosomal protein S15 CVS41_RS16320 PF09157 Pseudouridine synthase II TruB, C-terminal CVS41_RS16320 PF01509 TruB family pseudouridylate synthase (N terminal domain) CVS41_RS16320 PF16198 tRNA pseudouridylate synthase B C-terminal domain CVS41_RS16325 PF02033 Ribosome-binding factor A CVS41_RS16330 PF08364 Bacterial translation initiation factor IF-2 associated region CVS41_RS16330 PF11987 Translation-initiation factor 2 CVS41_RS16330 PF00009 Elongation factor Tu GTP binding domain CVS41_RS16330 PF04760 Translation initiation factor IF-2, N-terminal region CVS41_RS16335 PF00575 S1 RNA binding domain CVS41_RS16335 PF13184 NusA-like KH domain CVS41_RS16335 PF08529 NusA N-terminal domain CVS41_RS16340 PF02576 RimP N-terminal domain CVS41_RS16340 PF17384 RimP C-terminal SH3 domain CVS41_RS16355 PF03840 Preprotein translocase SecG subunit CVS41_RS16360 PF00121 Triosephosphate isomerase CVS41_RS16365 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CVS41_RS16365 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CVS41_RS16365 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CVS41_RS16365 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CVS41_RS16370 PF00809 Pterin binding enzyme CVS41_RS16375 PF00004 ATPase family associated with various cellular activities (AAA) CVS41_RS16375 PF17862 AAA+ lid domain CVS41_RS16375 PF06480 FtsH Extracellular CVS41_RS16375 PF01434 Peptidase family M41 CVS41_RS16380 PF01728 FtsJ-like methyltransferase CVS41_RS16385 PF01985 CRS1 / YhbY (CRM) domain CVS41_RS16395 PF03449 Transcription elongation factor, N-terminal CVS41_RS16395 PF01272 Transcription elongation factor, GreA/GreB, C-term CVS41_RS16400 PF00691 OmpA family CVS41_RS16400 PF13677 Membrane MotB of proton-channel complex MotA/MotB CVS41_RS16405 PF01618 MotA/TolQ/ExbB proton channel family CVS41_RS16410 PF02609 Exonuclease VII small subunit CVS41_RS16415 PF00348 Polyprenyl synthetase CVS41_RS16420 PF02779 Transketolase, pyrimidine binding domain CVS41_RS16420 PF02780 Transketolase, C-terminal domain CVS41_RS16420 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CVS41_RS16425 PF02872 5'-nucleotidase, C-terminal domain CVS41_RS16425 PF00149 Calcineurin-like phosphoesterase CVS41_RS16445 PF02954 Bacterial regulatory protein, Fis family CVS41_RS16445 PF00158 Sigma-54 interaction domain CVS41_RS16445 PF00072 Response regulator receiver domain CVS41_RS16450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CVS41_RS16450 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CVS41_RS16460 PF04102 SlyX CVS41_RS16465 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS16465 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS41_RS16470 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS16475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS41_RS16480 PF00005 ABC transporter CVS41_RS16480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS41_RS16490 PF04608 Phosphatidylglycerophosphatase A CVS41_RS16495 PF00586 AIR synthase related protein, N-terminal domain CVS41_RS16495 PF02769 AIR synthase related protein, C-terminal domain CVS41_RS16500 PF01029 NusB family CVS41_RS16505 PF00885 6,7-dimethyl-8-ribityllumazine synthase CVS41_RS16510 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CVS41_RS16510 PF00925 GTP cyclohydrolase II CVS41_RS16515 PF00677 Lumazine binding domain CVS41_RS16520 PF01872 RibD C-terminal domain CVS41_RS16520 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CVS41_RS16525 PF03477 ATP cone domain CVS41_RS16535 PF00464 Serine hydroxymethyltransferase CVS41_RS16545 PF01627 Hpt domain CVS41_RS16545 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS16545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS16545 PF00072 Response regulator receiver domain CVS41_RS16545 PF00672 HAMP domain CVS41_RS16550 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CVS41_RS16560 PF00072 Response regulator receiver domain CVS41_RS16560 PF00486 Transcriptional regulatory protein, C terminal CVS41_RS16565 PF03264 NapC/NirT cytochrome c family, N-terminal region CVS41_RS16570 PF01568 Molydopterin dinucleotide binding domain CVS41_RS16570 PF00384 Molybdopterin oxidoreductase CVS41_RS16570 PF18364 Molybdopterin oxidoreductase N-terminal domain CVS41_RS16575 PF02613 Nitrate reductase delta subunit CVS41_RS16585 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS16585 PF00563 EAL domain CVS41_RS16585 PF03707 Bacterial signalling protein N terminal repeat CVS41_RS16595 PF00501 AMP-binding enzyme CVS41_RS16595 PF16177 Acetyl-coenzyme A synthetase N-terminus CVS41_RS16595 PF13193 AMP-binding enzyme C-terminal domain CVS41_RS16600 PF01220 Dehydroquinase class II CVS41_RS16605 PF00364 Biotin-requiring enzyme CVS41_RS16610 PF00289 Biotin carboxylase, N-terminal domain CVS41_RS16610 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS41_RS16610 PF02785 Biotin carboxylase C-terminal domain CVS41_RS16620 PF00474 Sodium:solute symporter family CVS41_RS16625 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CVS41_RS16625 PF00367 phosphotransferase system, EIIB CVS41_RS16625 PF02378 Phosphotransferase system, EIIC CVS41_RS16630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS16630 PF03466 LysR substrate binding domain CVS41_RS16635 PF00107 Zinc-binding dehydrogenase CVS41_RS16635 PF08240 Alcohol dehydrogenase GroES-like domain CVS41_RS16645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS41_RS16645 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS41_RS16650 PF14602 Hexapeptide repeat of succinyl-transferase CVS41_RS16650 PF12464 Maltose acetyltransferase CVS41_RS16655 PF00881 Nitroreductase family CVS41_RS16660 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS41_RS16660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CVS41_RS16665 PF01343 Peptidase family S49 CVS41_RS16670 PF17969 L,D-transpeptidase C-terminal domain CVS41_RS16670 PF03734 L,D-transpeptidase catalytic domain CVS41_RS16685 PF02472 Biopolymer transport protein ExbD/TolR CVS41_RS16690 PF01618 MotA/TolQ/ExbB proton channel family CVS41_RS16695 PF01618 MotA/TolQ/ExbB proton channel family CVS41_RS16705 PF07715 TonB-dependent Receptor Plug Domain CVS41_RS16705 PF00593 TonB dependent receptor CVS41_RS16710 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS16715 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS16715 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS41_RS16725 PF00005 ABC transporter CVS41_RS16725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS41_RS16730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS41_RS16730 PF00005 ABC transporter CVS41_RS16740 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CVS41_RS16740 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CVS41_RS16740 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CVS41_RS16745 PF01370 NAD dependent epimerase/dehydratase family CVS41_RS16750 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) CVS41_RS16760 PF01464 Transglycosylase SLT domain CVS41_RS16775 PF00005 ABC transporter CVS41_RS16775 PF12848 ABC transporter CVS41_RS16785 PF00860 Permease family CVS41_RS16790 PF00749 tRNA synthetases class I (E and Q), catalytic domain CVS41_RS16795 PF00749 tRNA synthetases class I (E and Q), catalytic domain CVS41_RS16800 PF00672 HAMP domain CVS41_RS16800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS16810 PF00313 'Cold-shock' DNA-binding domain CVS41_RS16850 PF00929 Exonuclease CVS41_RS16855 PF03193 RsgA GTPase CVS41_RS16860 PF02666 Phosphatidylserine decarboxylase CVS41_RS16865 PF09905 DNA-binding protein VF530 CVS41_RS16880 PF00171 Aldehyde dehydrogenase family CVS41_RS16885 PF00696 Amino acid kinase family CVS41_RS16885 PF01472 PUA domain CVS41_RS16890 PF07417 Sigma factor-binding transcriptional regulator Crl CVS41_RS16895 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CVS41_RS16900 PF00156 Phosphoribosyl transferase domain CVS41_RS16910 PF07687 Peptidase dimerisation domain CVS41_RS16910 PF01546 Peptidase family M20/M25/M40 CVS41_RS16915 PF05099 Tellurite resistance protein TerB CVS41_RS16915 PF00226 DnaJ domain CVS41_RS16920 PF00483 Nucleotidyl transferase CVS41_RS16925 PF01636 Phosphotransferase enzyme family CVS41_RS16930 PF03968 OstA-like protein CVS41_RS16930 PF04453 LPS transport system D CVS41_RS16935 PF09312 SurA N-terminal domain CVS41_RS16935 PF00639 PPIC-type PPIASE domain CVS41_RS16940 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CVS41_RS16945 PF00398 Ribosomal RNA adenine dimethylase CVS41_RS16950 PF04379 ApaG domain CVS41_RS16955 PF00149 Calcineurin-like phosphoesterase CVS41_RS16970 PF00296 Luciferase-like monooxygenase CVS41_RS16980 PF07670 Nucleoside recognition CVS41_RS16985 PF01018 GTP1/OBG CVS41_RS16985 PF01926 50S ribosome-binding GTPase CVS41_RS16990 PF01016 Ribosomal L27 protein CVS41_RS16995 PF00829 Ribosomal prokaryotic L21 protein CVS41_RS17000 PF00348 Polyprenyl synthetase CVS41_RS17005 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CVS41_RS17010 PF01145 SPFH domain / Band 7 family CVS41_RS17015 PF12221 Bacterial membrane protein N terminal CVS41_RS17015 PF01145 SPFH domain / Band 7 family CVS41_RS17020 PF01926 50S ribosome-binding GTPase CVS41_RS17020 PF16360 GTP-binding GTPase Middle Region CVS41_RS17020 PF13167 GTP-binding GTPase N-terminal CVS41_RS17025 PF17209 Hfq protein CVS41_RS17035 PF08676 MutL C terminal dimerisation domain CVS41_RS17035 PF01119 DNA mismatch repair protein, C-terminal domain CVS41_RS17040 PF08676 MutL C terminal dimerisation domain CVS41_RS17040 PF01119 DNA mismatch repair protein, C-terminal domain CVS41_RS17045 PF01520 N-acetylmuramoyl-L-alanine amidase CVS41_RS17050 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CVS41_RS17055 PF03853 YjeF-related protein N-terminus CVS41_RS17055 PF01256 Carbohydrate kinase CVS41_RS17060 PF08331 Domain of unknown function (DUF1730) CVS41_RS17065 PF00480 ROK family CVS41_RS17075 PF09383 NIL domain CVS41_RS17075 PF00005 ABC transporter CVS41_RS17080 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS17085 PF03180 NLPA lipoprotein CVS41_RS17090 PF02357 Transcription termination factor nusG CVS41_RS17095 PF12729 Four helix bundle sensory module for signal transduction CVS41_RS17095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS17095 PF00672 HAMP domain CVS41_RS17100 PF03707 Bacterial signalling protein N terminal repeat CVS41_RS17100 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS17100 PF00563 EAL domain CVS41_RS17105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS17105 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS17105 PF09456 RcsC Alpha-Beta-Loop (ABL) CVS41_RS17105 PF00072 Response regulator receiver domain CVS41_RS17115 PF01966 HD domain CVS41_RS17115 PF13286 Phosphohydrolase-associated domain CVS41_RS17120 PF01627 Hpt domain CVS41_RS17120 PF18415 Histidine kinase receptor ArcB trans-membrane domain CVS41_RS17120 PF00512 His Kinase A (phospho-acceptor) domain CVS41_RS17120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS17120 PF00072 Response regulator receiver domain CVS41_RS17120 PF00989 PAS fold CVS41_RS17140 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CVS41_RS17145 PF03466 LysR substrate binding domain CVS41_RS17145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS17155 PF01259 SAICAR synthetase CVS41_RS17160 PF06804 NlpB/DapX lipoprotein CVS41_RS17165 PF00701 Dihydrodipicolinate synthetase family CVS41_RS17170 PF01842 ACT domain CVS41_RS17175 PF00578 AhpC/TSA family CVS41_RS17180 PF03887 YfbU domain CVS41_RS17185 PF04217 Protein of unknown function, DUF412 CVS41_RS17190 PF00871 Acetokinase family CVS41_RS17195 PF01515 Phosphate acetyl/butaryl transferase CVS41_RS17195 PF07085 DRTGG domain CVS41_RS17205 PF00483 Nucleotidyl transferase CVS41_RS17210 PF00854 POT family CVS41_RS17215 PF00072 Response regulator receiver domain CVS41_RS17245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS41_RS17250 PF02321 Outer membrane efflux protein CVS41_RS17255 PF01207 Dihydrouridine synthase (Dus) CVS41_RS17260 PF02954 Bacterial regulatory protein, Fis family CVS41_RS17280 PF01546 Peptidase family M20/M25/M40 CVS41_RS17285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS17285 PF03466 LysR substrate binding domain CVS41_RS17290 PF01810 LysE type translocator CVS41_RS17295 PF10369 Small subunit of acetolactate synthase CVS41_RS17300 PF00205 Thiamine pyrophosphate enzyme, central domain CVS41_RS17300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS41_RS17300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS41_RS17315 PF01569 PAP2 superfamily CVS41_RS17325 PF00682 HMGL-like CVS41_RS17325 PF08502 LeuA allosteric (dimerisation) domain CVS41_RS17330 PF00180 Isocitrate/isopropylmalate dehydrogenase CVS41_RS17335 PF00330 Aconitase family (aconitate hydratase) CVS41_RS17340 PF00694 Aconitase C-terminal domain CVS41_RS17360 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS17365 PF00005 ABC transporter CVS41_RS17370 PF13638 PIN domain CVS41_RS17370 PF02562 PhoH-like protein CVS41_RS17380 PF08343 Ribonucleotide reductase N-terminal CVS41_RS17380 PF02867 Ribonucleotide reductase, barrel domain CVS41_RS17380 PF00317 Ribonucleotide reductase, all-alpha domain CVS41_RS17410 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS17410 PF00563 EAL domain CVS41_RS17410 PF03707 Bacterial signalling protein N terminal repeat CVS41_RS17420 PF00118 TCP-1/cpn60 chaperonin family CVS41_RS17425 PF00166 Chaperonin 10 Kd subunit CVS41_RS17430 PF01554 MatE CVS41_RS17435 PF04186 FxsA cytoplasmic membrane protein CVS41_RS17440 PF10415 Fumarase C C-terminus CVS41_RS17440 PF00206 Lyase CVS41_RS17445 PF03605 Anaerobic c4-dicarboxylate membrane transporter CVS41_RS17450 PF00814 Glycoprotease family CVS41_RS17455 PF01165 Ribosomal protein S21 CVS41_RS17460 PF09424 Yqey-like protein CVS41_RS17465 PF10410 DnaB-helicase binding domain of primase CVS41_RS17465 PF08278 DNA primase DnaG DnaB-binding CVS41_RS17465 PF08275 DNA primase catalytic core, N-terminal domain CVS41_RS17465 PF01807 CHC2 zinc finger CVS41_RS17470 PF03979 Sigma-70 factor, region 1.1 CVS41_RS17470 PF04542 Sigma-70 region 2 CVS41_RS17470 PF04539 Sigma-70 region 3 CVS41_RS17470 PF04545 Sigma-70, region 4 CVS41_RS17470 PF04546 Sigma-70, non-essential region CVS41_RS17470 PF00140 Sigma-70 factor, region 1.2 CVS41_RS17515 PF00356 Bacterial regulatory proteins, lacI family CVS41_RS17525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS17525 PF00672 HAMP domain CVS41_RS17530 PF00933 Glycosyl hydrolase family 3 N terminal domain CVS41_RS17530 PF14310 Fibronectin type III-like domain CVS41_RS17530 PF01915 Glycosyl hydrolase family 3 C-terminal domain CVS41_RS17535 PF02018 Carbohydrate binding domain CVS41_RS17535 PF00759 Glycosyl hydrolase family 9 CVS41_RS17535 PF00404 Dockerin type I domain CVS41_RS17535 PF02927 Cellulase N-terminal ig-like domain CVS41_RS17540 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CVS41_RS17545 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CVS41_RS17545 PF02378 Phosphotransferase system, EIIC CVS41_RS17550 PF00232 Glycosyl hydrolase family 1 CVS41_RS17555 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CVS41_RS17560 PF00722 Glycosyl hydrolases family 16 CVS41_RS17590 PF03796 DnaB-like helicase C terminal domain CVS41_RS17590 PF00772 DnaB-like helicase N terminal domain CVS41_RS17620 PF02844 Phosphoribosylglycinamide synthetase, N domain CVS41_RS17620 PF02843 Phosphoribosylglycinamide synthetase, C domain CVS41_RS17620 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CVS41_RS17625 PF02142 MGS-like domain CVS41_RS17625 PF01808 AICARFT/IMPCHase bienzyme CVS41_RS17630 PF13411 MerR HTH family regulatory protein CVS41_RS17635 PF03889 Alternative ribosome-rescue factor A CVS41_RS17640 PF06969 HemN C-terminal domain CVS41_RS17640 PF04055 Radical SAM superfamily CVS41_RS17645 PF01725 Ham1 family CVS41_RS17650 PF07690 Major Facilitator Superfamily CVS41_RS17655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CVS41_RS17655 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CVS41_RS17665 PF13302 Acetyltransferase (GNAT) domain CVS41_RS17670 PF13302 Acetyltransferase (GNAT) domain CVS41_RS17675 PF01447 Thermolysin metallopeptidase, catalytic domain CVS41_RS17675 PF02868 Thermolysin metallopeptidase, alpha-helical domain CVS41_RS17675 PF04151 Bacterial pre-peptidase C-terminal domain CVS41_RS17675 PF07504 Fungalysin/Thermolysin Propeptide Motif CVS41_RS17675 PF03413 Peptidase propeptide and YPEB domain CVS41_RS17680 PF03466 LysR substrate binding domain CVS41_RS17680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS17685 PF07690 Major Facilitator Superfamily CVS41_RS17690 PF00583 Acetyltransferase (GNAT) family CVS41_RS17695 PF03144 Elongation factor Tu domain 2 CVS41_RS17695 PF16658 Class II release factor RF3, C-terminal domain CVS41_RS17695 PF00009 Elongation factor Tu GTP binding domain CVS41_RS17705 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS17710 PF05762 VWA domain containing CoxE-like protein CVS41_RS17715 PF17868 AAA lid domain CVS41_RS17715 PF07728 AAA domain (dynein-related subfamily) CVS41_RS17715 PF12592 Protein of unknown function (DUF3763) CVS41_RS17725 PF13673 Acetyltransferase (GNAT) domain CVS41_RS17725 PF00583 Acetyltransferase (GNAT) family CVS41_RS17735 PF00501 AMP-binding enzyme CVS41_RS17740 PF04262 Glutamate-cysteine ligase CVS41_RS17745 PF00675 Insulinase (Peptidase family M16) CVS41_RS17745 PF05193 Peptidase M16 inactive domain CVS41_RS17750 PF09335 SNARE associated Golgi protein CVS41_RS17755 PF00107 Zinc-binding dehydrogenase CVS41_RS17755 PF08240 Alcohol dehydrogenase GroES-like domain CVS41_RS17780 PF00970 Oxidoreductase FAD-binding domain CVS41_RS17780 PF00175 Oxidoreductase NAD-binding domain CVS41_RS17785 PF03948 Ribosomal protein L9, C-terminal domain CVS41_RS17785 PF01281 Ribosomal protein L9, N-terminal domain CVS41_RS17790 PF01084 Ribosomal protein S18 CVS41_RS17795 PF01250 Ribosomal protein S6 CVS41_RS17800 PF01566 Natural resistance-associated macrophage protein CVS41_RS17805 PF01411 tRNA synthetases class II (A) CVS41_RS17805 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CVS41_RS17805 PF02272 DHHA1 domain CVS41_RS17815 PF00216 Bacterial DNA-binding protein CVS41_RS17820 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CVS41_RS17825 PF07238 PilZ domain CVS41_RS17830 PF18073 Rubredoxin metal binding domain CVS41_RS17845 PF18429 Domain of unknown function (DUF5609) CVS41_RS17855 PF01048 Phosphorylase superfamily CVS41_RS17860 PF01676 Metalloenzyme superfamily CVS41_RS17865 PF02885 Glycosyl transferase family, helical bundle domain CVS41_RS17865 PF00591 Glycosyl transferase family, a/b domain CVS41_RS17865 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CVS41_RS17870 PF01791 DeoC/LacD family aldolase CVS41_RS17880 PF07662 Na+ dependent nucleoside transporter C-terminus CVS41_RS17880 PF07670 Nucleoside recognition CVS41_RS17880 PF01773 Na+ dependent nucleoside transporter N-terminus CVS41_RS17885 PF01026 TatD related DNase CVS41_RS17890 PF07963 Prokaryotic N-terminal methylation motif CVS41_RS17900 PF02664 S-Ribosylhomocysteinase (LuxS) CVS41_RS17910 PF00543 Nitrogen regulatory protein P-II CVS41_RS17915 PF02540 NAD synthase CVS41_RS17915 PF00795 Carbon-nitrogen hydrolase CVS41_RS17950 PF05567 Neisseria PilC beta-propeller domain CVS41_RS17975 PF02401 LytB protein CVS41_RS17980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CVS41_RS17985 PF01252 Signal peptidase (SPase) II CVS41_RS17990 PF00133 tRNA synthetases class I (I, L, M and V) CVS41_RS17990 PF08264 Anticodon-binding domain of tRNA CVS41_RS17990 PF06827 Zinc finger found in FPG and IleRS CVS41_RS17995 PF01687 Riboflavin kinase CVS41_RS17995 PF06574 FAD synthetase CVS41_RS18000 PF03023 Lipid II flippase MurJ CVS41_RS18005 PF01649 Ribosomal protein S20 CVS41_RS18010 PF01022 Bacterial regulatory protein, arsR family CVS41_RS18015 PF03466 LysR substrate binding domain CVS41_RS18015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS18025 PF06965 Na+/H+ antiporter 1 CVS41_RS18030 PF00303 Thymidylate synthase CVS41_RS18035 PF01790 Prolipoprotein diacylglyceryl transferase CVS41_RS18040 PF02896 PEP-utilising enzyme, TIM barrel domain CVS41_RS18040 PF00391 PEP-utilising enzyme, mobile domain CVS41_RS18040 PF01590 GAF domain CVS41_RS18040 PF05524 PEP-utilising enzyme, N-terminal CVS41_RS18045 PF00293 NUDIX domain CVS41_RS18050 PF02976 DNA mismatch repair enzyme MutH CVS41_RS18060 PF01245 Ribosomal protein L19 CVS41_RS18065 PF01746 tRNA (Guanine-1)-methyltransferase CVS41_RS18070 PF05239 PRC-barrel domain CVS41_RS18070 PF01782 RimM N-terminal domain CVS41_RS18075 PF00886 Ribosomal protein S16 CVS41_RS18080 PF00448 SRP54-type protein, GTPase domain CVS41_RS18080 PF02881 SRP54-type protein, helical bundle domain CVS41_RS18080 PF02978 Signal peptide binding domain CVS41_RS18085 PF01578 Cytochrome C assembly protein CVS41_RS18090 PF01595 Cyclin M transmembrane N-terminal domain CVS41_RS18090 PF03471 Transporter associated domain CVS41_RS18090 PF00571 CBS domain CVS41_RS18095 PF02082 Transcriptional regulator CVS41_RS18100 PF00175 Oxidoreductase NAD-binding domain CVS41_RS18100 PF00042 Globin CVS41_RS18100 PF00970 Oxidoreductase FAD-binding domain CVS41_RS18105 PF08238 Sel1 repeat CVS41_RS18110 PF00056 lactate/malate dehydrogenase, NAD binding domain CVS41_RS18110 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CVS41_RS18115 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS18120 PF00528 Binding-protein-dependent transport system inner membrane component CVS41_RS18125 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS41_RS18130 PF00005 ABC transporter CVS41_RS18135 PF01316 Arginine repressor, DNA binding domain CVS41_RS18135 PF02863 Arginine repressor, C-terminal domain CVS41_RS18140 PF04261 Dyp-type peroxidase family CVS41_RS18145 PF00005 ABC transporter CVS41_RS18145 PF08402 TOBE domain CVS41_RS18155 PF13416 Bacterial extracellular solute-binding protein CVS41_RS18160 PF00543 Nitrogen regulatory protein P-II CVS41_RS18165 PF00472 RF-1 domain CVS41_RS18170 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CVS41_RS18170 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CVS41_RS18180 PF03883 Peroxide stress protein YaaA CVS41_RS18185 PF00437 Type II/IV secretion system protein CVS41_RS18190 PF00437 Type II/IV secretion system protein CVS41_RS18195 PF01168 Alanine racemase, N-terminal domain CVS41_RS18200 PF14748 Pyrroline-5-carboxylate reductase dimerisation CVS41_RS18200 PF03807 NADP oxidoreductase coenzyme F420-dependent CVS41_RS18205 PF02325 YGGT family CVS41_RS18210 PF02594 Uncharacterised ACR, YggU family COG1872 CVS41_RS18220 PF07670 Nucleoside recognition CVS41_RS18220 PF01773 Na+ dependent nucleoside transporter N-terminus CVS41_RS18220 PF07662 Na+ dependent nucleoside transporter C-terminus CVS41_RS18225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS18225 PF03466 LysR substrate binding domain CVS41_RS18230 PF00255 Glutathione peroxidase CVS41_RS18240 PF02595 Glycerate kinase family CVS41_RS18245 PF02447 GntP family permease CVS41_RS18250 PF13556 PucR C-terminal helix-turn-helix domain CVS41_RS18250 PF17853 GGDEF-like domain CVS41_RS18250 PF05651 Putative sugar diacid recognition CVS41_RS18255 PF06062 Uncharacterised protein family (UPF0231) CVS41_RS18275 PF00271 Helicase conserved C-terminal domain CVS41_RS18275 PF00270 DEAD/DEAH box helicase CVS41_RS18285 PF08534 Redoxin CVS41_RS18290 PF00403 Heavy-metal-associated domain CVS41_RS18295 PF03714 Bacterial pullanase-associated domain CVS41_RS18295 PF17967 Pullulanase N2 domain CVS41_RS18295 PF18494 Pullulanase Ins domain CVS41_RS18295 PF11852 Domain of unknown function (DUF3372) CVS41_RS18295 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CVS41_RS18310 PF02583 Metal-sensitive transcriptional repressor CVS41_RS18315 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CVS41_RS18320 PF01270 Glycosyl hydrolases family 8 CVS41_RS18325 PF03170 Bacterial cellulose synthase subunit CVS41_RS18330 PF07238 PilZ domain CVS41_RS18330 PF03552 Cellulose synthase CVS41_RS18330 PF00535 Glycosyl transferase family 2 CVS41_RS18335 PF06564 Cellulose biosynthesis protein BcsQ CVS41_RS18345 PF11658 Cellulose biosynthesis protein BcsG CVS41_RS18350 PF00155 Aminotransferase class I and II CVS41_RS18355 PF03466 LysR substrate binding domain CVS41_RS18355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS18365 PF04055 Radical SAM superfamily CVS41_RS18370 PF11230 Protein of unknown function (DUF3029) CVS41_RS18395 PF00175 Oxidoreductase NAD-binding domain CVS41_RS18395 PF00970 Oxidoreductase FAD-binding domain CVS41_RS18395 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS41_RS18410 PF00535 Glycosyl transferase family 2 CVS41_RS18415 PF14883 Hypothetical glycosyl hydrolase family 13 CVS41_RS18415 PF01522 Polysaccharide deacetylase CVS41_RS18430 PF00672 HAMP domain CVS41_RS18430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS41_RS18430 PF12729 Four helix bundle sensory module for signal transduction CVS41_RS18435 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CVS41_RS18435 PF18416 N-acetylglucosamine binding protein domain 2 CVS41_RS18440 PF13194 Domain of unknown function (DUF4010) CVS41_RS18445 PF12464 Maltose acetyltransferase CVS41_RS18445 PF14602 Hexapeptide repeat of succinyl-transferase CVS41_RS18460 PF13419 Haloacid dehalogenase-like hydrolase CVS41_RS18465 PF00293 NUDIX domain CVS41_RS18470 PF00459 Inositol monophosphatase family CVS41_RS18475 PF03222 Tryptophan/tyrosine permease family CVS41_RS18480 PF01588 Putative tRNA binding domain CVS41_RS18485 PF12833 Helix-turn-helix domain CVS41_RS18485 PF02311 AraC-like ligand binding domain CVS41_RS18490 PF01340 Met Apo-repressor, MetJ CVS41_RS18495 PF01053 Cys/Met metabolism PLP-dependent enzyme CVS41_RS18500 PF03447 Homoserine dehydrogenase, NAD binding domain CVS41_RS18500 PF00742 Homoserine dehydrogenase CVS41_RS18500 PF00696 Amino acid kinase family CVS41_RS18505 PF01384 Phosphate transporter family CVS41_RS18510 PF01865 Protein of unknown function DUF47 CVS41_RS18520 PF00701 Dihydrodipicolinate synthetase family CVS41_RS18525 PF05175 Methyltransferase small domain CVS41_RS18525 PF08468 Methyltransferase small domain N-terminal CVS41_RS18530 PF00483 Nucleotidyl transferase CVS41_RS18535 PF08323 Starch synthase catalytic domain CVS41_RS18535 PF00534 Glycosyl transferases group 1 CVS41_RS18575 PF03553 Na+/H+ antiporter family CVS41_RS18580 PF01521 Iron-sulphur cluster biosynthesis CVS41_RS18590 PF00654 Voltage gated chloride channel CVS41_RS18595 PF00202 Aminotransferase class-III CVS41_RS18610 PF06965 Na+/H+ antiporter 1 CVS41_RS18610 PF13462 Thioredoxin CVS41_RS18640 PF00271 Helicase conserved C-terminal domain CVS41_RS18640 PF18337 RapA N-terminal Tudor like domain CVS41_RS18640 PF18339 RapA N-terminal Tudor like domain 1 CVS41_RS18640 PF00176 SNF2 family N-terminal domain CVS41_RS18640 PF12137 RNA polymerase recycling family C-terminal CVS41_RS18645 PF00849 RNA pseudouridylate synthase CVS41_RS18655 PF12464 Maltose acetyltransferase CVS41_RS18655 PF14602 Hexapeptide repeat of succinyl-transferase CVS41_RS18660 PF00128 Alpha amylase, catalytic domain CVS41_RS18660 PF11941 Domain of unknown function (DUF3459) CVS41_RS18665 PF00367 phosphotransferase system, EIIB CVS41_RS18665 PF02378 Phosphotransferase system, EIIC CVS41_RS18670 PF00356 Bacterial regulatory proteins, lacI family CVS41_RS18685 PF00710 Asparaginase, N-terminal CVS41_RS18685 PF17763 Glutaminase/Asparaginase C-terminal domain CVS41_RS18690 PF01595 Cyclin M transmembrane N-terminal domain CVS41_RS18690 PF03471 Transporter associated domain CVS41_RS18690 PF00571 CBS domain CVS41_RS18695 PF09335 SNARE associated Golgi protein CVS41_RS18700 PF00768 D-alanyl-D-alanine carboxypeptidase CVS41_RS18735 PF02599 Global regulator protein family CVS41_RS18740 PF13840 ACT domain CVS41_RS18740 PF01842 ACT domain CVS41_RS18740 PF00696 Amino acid kinase family CVS41_RS18745 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CVS41_RS18745 PF01411 tRNA synthetases class II (A) CVS41_RS18745 PF02272 DHHA1 domain CVS41_RS18750 PF02631 RecX family CVS41_RS18755 PF00154 recA bacterial DNA recombination protein CVS41_RS18760 PF02464 Competence-damaged protein CVS41_RS18775 PF01434 Peptidase family M41 CVS41_RS18775 PF00004 ATPase family associated with various cellular activities (AAA) CVS41_RS18775 PF17862 AAA+ lid domain CVS41_RS18795 PF12161 HsdM N-terminal domain CVS41_RS18795 PF02384 N-6 DNA Methylase CVS41_RS18825 PF18766 SWI2/SNF2 ATPase CVS41_RS18825 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CVS41_RS18825 PF11867 Domain of unknown function (DUF3387) CVS41_RS18850 PF00488 MutS domain V CVS41_RS18850 PF05190 MutS family domain IV CVS41_RS18850 PF05192 MutS domain III CVS41_RS18850 PF05188 MutS domain II CVS41_RS18850 PF01624 MutS domain I CVS41_RS18855 PF01734 Patatin-like phospholipase CVS41_RS18865 PF04172 LrgB-like family CVS41_RS18870 PF03788 LrgA family CVS41_RS18875 PF03466 LysR substrate binding domain CVS41_RS18875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS18890 PF04073 Aminoacyl-tRNA editing domain CVS41_RS18910 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CVS41_RS18915 PF04055 Radical SAM superfamily CVS41_RS18915 PF06968 Biotin and Thiamin Synthesis associated domain CVS41_RS18920 PF05690 Thiazole biosynthesis protein ThiG CVS41_RS18930 PF00899 ThiF family CVS41_RS18935 PF02581 Thiamine monophosphate synthase CVS41_RS18940 PF13667 ThiC-associated domain CVS41_RS18940 PF01964 Radical SAM ThiC family CVS41_RS18945 PF03440 Aerolysin/Pertussis toxin (APT) domain CVS41_RS18945 PF01117 Aerolysin toxin CVS41_RS18960 PF00072 Response regulator receiver domain CVS41_RS18960 PF00486 Transcriptional regulatory protein, C terminal CVS41_RS18965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS41_RS18970 PF18030 RimK PreATP-grasp domain CVS41_RS18970 PF08443 RimK-like ATP-grasp domain CVS41_RS18975 PF00809 Pterin binding enzyme CVS41_RS18975 PF02607 B12 binding domain CVS41_RS18975 PF02965 Vitamin B12 dependent methionine synthase, activation domain CVS41_RS18975 PF02310 B12 binding domain CVS41_RS18975 PF02574 Homocysteine S-methyltransferase CVS41_RS18980 PF00999 Sodium/hydrogen exchanger family CVS41_RS19005 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CVS41_RS19015 PF07690 Major Facilitator Superfamily CVS41_RS19020 PF01914 MarC family integral membrane protein CVS41_RS19030 PF01523 Putative modulator of DNA gyrase CVS41_RS19035 PF00795 Carbon-nitrogen hydrolase CVS41_RS19050 PF13502 AsmA-like C-terminal region CVS41_RS19050 PF13116 Protein of unknown function CVS41_RS19055 PF00575 S1 RNA binding domain CVS41_RS19055 PF10150 Ribonuclease E/G family CVS41_RS19060 PF02545 Maf-like protein CVS41_RS19065 PF04093 rod shape-determining protein MreD CVS41_RS19070 PF04085 rod shape-determining protein MreC CVS41_RS19100 PF07963 Prokaryotic N-terminal methylation motif CVS41_RS19100 PF00114 Pilin (bacterial filament) CVS41_RS19105 PF07963 Prokaryotic N-terminal methylation motif CVS41_RS19120 PF00482 Type II secretion system (T2SS), protein F CVS41_RS19125 PF00437 Type II/IV secretion system protein CVS41_RS19125 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CVS41_RS19140 PF00263 Bacterial type II and III secretion system protein CVS41_RS19140 PF03958 Bacterial type II/III secretion system short domain CVS41_RS19170 PF00563 EAL domain CVS41_RS19170 PF17157 Gammaproteobacterial periplasmic sensor domain CVS41_RS19170 PF00990 Diguanylate cyclase, GGDEF domain CVS41_RS19175 PF12792 CSS motif domain associated with EAL CVS41_RS19175 PF00563 EAL domain CVS41_RS19180 PF01699 Sodium/calcium exchanger protein CVS41_RS19185 PF00221 Aromatic amino acid lyase CVS41_RS19190 PF01175 Urocanase Rossmann-like domain CVS41_RS19190 PF17392 Urocanase C-terminal domain CVS41_RS19190 PF17391 Urocanase N-terminal domain CVS41_RS19195 PF00491 Arginase family CVS41_RS19200 PF01979 Amidohydrolase family CVS41_RS19205 PF07702 UTRA domain CVS41_RS19205 PF00392 Bacterial regulatory proteins, gntR family CVS41_RS19210 PF00484 Carbonic anhydrase CVS41_RS19215 PF04542 Sigma-70 region 2 CVS41_RS19215 PF00140 Sigma-70 factor, region 1.2 CVS41_RS19215 PF04545 Sigma-70, region 4 CVS41_RS19220 PF18075 FtsX extracellular domain CVS41_RS19225 PF00005 ABC transporter CVS41_RS19230 PF02881 SRP54-type protein, helical bundle domain CVS41_RS19230 PF00448 SRP54-type protein, GTPase domain CVS41_RS19255 PF00999 Sodium/hydrogen exchanger family CVS41_RS19255 PF02254 TrkA-N domain CVS41_RS19260 PF02525 Flavodoxin-like fold CVS41_RS19265 PF03466 LysR substrate binding domain CVS41_RS19265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS19270 PF00106 short chain dehydrogenase CVS41_RS19285 PF00326 Prolyl oligopeptidase family CVS41_RS19285 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CVS41_RS19300 PF13091 PLD-like domain CVS41_RS19305 PF01464 Transglycosylase SLT domain CVS41_RS19305 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS41_RS19315 PF02416 mttA/Hcf106 family CVS41_RS19320 PF03466 LysR substrate binding domain CVS41_RS19320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS19325 PF01914 MarC family integral membrane protein CVS41_RS19330 PF10678 Protein of unknown function (DUF2492) CVS41_RS19335 PF00375 Sodium:dicarboxylate symporter family CVS41_RS19345 PF03466 LysR substrate binding domain CVS41_RS19345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS41_RS19350 PF13533 Biotin-lipoyl like CVS41_RS19355 PF07690 Major Facilitator Superfamily CVS41_RS19360 PF07947 YhhN family CVS41_RS19380 PF00440 Bacterial regulatory proteins, tetR family CVS41_RS19420 PF03143 Elongation factor Tu C-terminal domain CVS41_RS19420 PF00009 Elongation factor Tu GTP binding domain CVS41_RS19420 PF03144 Elongation factor Tu domain 2 CVS41_RS19425 PF14492 Elongation Factor G, domain II CVS41_RS19425 PF00009 Elongation factor Tu GTP binding domain CVS41_RS19425 PF03144 Elongation factor Tu domain 2 CVS41_RS19425 PF03764 Elongation factor G, domain IV CVS41_RS19425 PF00679 Elongation factor G C-terminus CVS41_RS19430 PF00177 Ribosomal protein S7p/S5e CVS41_RS19435 PF00164 Ribosomal protein S12/S23 CVS41_RS19440 PF04077 DsrH like protein CVS41_RS19445 PF02635 DsrE/DsrF-like family CVS41_RS19450 PF02635 DsrE/DsrF-like family CVS41_RS19455 PF01042 Endoribonuclease L-PSP CVS41_RS19460 PF13309 HTH domain CVS41_RS19460 PF08348 YheO-like PAS domain CVS41_RS19465 PF04997 RNA polymerase Rpb1, domain 1 CVS41_RS19465 PF05000 RNA polymerase Rpb1, domain 4 CVS41_RS19465 PF04983 RNA polymerase Rpb1, domain 3 CVS41_RS19465 PF00623 RNA polymerase Rpb1, domain 2 CVS41_RS19465 PF04998 RNA polymerase Rpb1, domain 5 CVS41_RS19470 PF00562 RNA polymerase Rpb2, domain 6 CVS41_RS19470 PF04565 RNA polymerase Rpb2, domain 3 CVS41_RS19470 PF04561 RNA polymerase Rpb2, domain 2 CVS41_RS19470 PF04563 RNA polymerase beta subunit CVS41_RS19470 PF04560 RNA polymerase Rpb2, domain 7 CVS41_RS19470 PF10385 RNA polymerase beta subunit external 1 domain CVS41_RS19475 PF00542 Ribosomal protein L7/L12 C-terminal domain CVS41_RS19475 PF16320 Ribosomal protein L7/L12 dimerisation domain CVS41_RS19480 PF00466 Ribosomal protein L10 CVS41_RS19485 PF00687 Ribosomal protein L1p/L10e family CVS41_RS19490 PF03946 Ribosomal protein L11, N-terminal domain CVS41_RS19490 PF00298 Ribosomal protein L11, RNA binding domain CVS41_RS19495 PF02357 Transcription termination factor nusG CVS41_RS19495 PF00467 KOW motif CVS41_RS19500 PF00584 SecE/Sec61-gamma subunits of protein translocation complex