CVS42_RS00020 SM01234 CVS42_RS00020 CVS42_RS00035 SM00382 ATPases associated with a variety of cellular activities CVS42_RS00045 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS00045 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CVS42_RS00050 SM00382 ATPases associated with a variety of cellular activities CVS42_RS00050 SM00760 Bacterial dnaA protein helix-turn-helix domain CVS42_RS00055 SM00480 DNA polymerase III beta subunit CVS42_RS00065 SM00387 Histidine kinase-like ATPases CVS42_RS00065 SM00433 TopoisomeraseII CVS42_RS00080 SM00342 helix_turn_helix, arabinose operon control protein CVS42_RS00110 SM00342 helix_turn_helix, arabinose operon control protein CVS42_RS00120 SM00448 cheY-homologous receiver domain CVS42_RS00120 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS00125 SM00387 Histidine kinase-like ATPases CVS42_RS00125 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS00155 SM00091 PAS domain CVS42_RS00155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS00155 SM00387 Histidine kinase-like ATPases CVS42_RS00195 SM00458 Ricin-type beta-trefoil CVS42_RS00215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS00215 SM00387 Histidine kinase-like ATPases CVS42_RS00215 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS00220 SM00448 cheY-homologous receiver domain CVS42_RS00250 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CVS42_RS00250 SM00954 Region found in RelA / SpoT proteins CVS42_RS00255 SM01409 CVS42_RS00255 CVS42_RS00260 SM00072 Guanylate kinase homologues. CVS42_RS00280 SM00267 diguanylate cyclase CVS42_RS00335 SM00387 Histidine kinase-like ATPases CVS42_RS00340 SM00448 cheY-homologous receiver domain CVS42_RS00340 SM00850 LytTr DNA-binding domain CVS42_RS00355 SM01001 AIR carboxylase CVS42_RS00385 SM00360 RNA recognition motif CVS42_RS00430 SM00052 Putative diguanylate phosphodiesterase CVS42_RS00430 SM00267 diguanylate cyclase CVS42_RS00440 SM00829 Enoylreductase CVS42_RS00500 SM00342 helix_turn_helix, arabinose operon control protein CVS42_RS00560 SM01321 CVS42_RS00560 CVS42_RS00575 SM00382 ATPases associated with a variety of cellular activities CVS42_RS00605 SM00924 MgtE intracellular N domain CVS42_RS00630 SM00382 ATPases associated with a variety of cellular activities CVS42_RS00630 SM01086 C-terminal, D2-small domain, of ClpB protein CVS42_RS00650 SM00836 DALR anticodon binding domain CVS42_RS00650 SM01016 Arginyl tRNA synthetase N terminal dom CVS42_RS00655 SM00464 Found in ATP-dependent protease La (LON) CVS42_RS00695 SM00354 helix_turn _helix lactose operon repressor CVS42_RS00700 SM01038 Beta galactosidase small chain CVS42_RS00710 SM00382 ATPases associated with a variety of cellular activities CVS42_RS00720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS00720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS00740 SM00642 Alpha-amylase domain CVS42_RS00785 SM01230 CVS42_RS00785 CVS42_RS00805 SM00382 ATPases associated with a variety of cellular activities CVS42_RS00840 SM00341 Helicase and RNase D C-terminal CVS42_RS00840 SM00487 DEAD-like helicases superfamily CVS42_RS00840 SM00490 helicase superfamily c-terminal domain CVS42_RS00840 SM00956 CVS42_RS00840 CVS42_RS00870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS00870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS00870 SM01358 CVS42_RS00870 CVS42_RS00890 SM00487 DEAD-like helicases superfamily CVS42_RS00890 SM00490 helicase superfamily c-terminal domain CVS42_RS00910 SM00919 Malic enzyme, NAD binding domain CVS42_RS00910 SM01274 CVS42_RS00910 CVS42_RS00940 SM00487 DEAD-like helicases superfamily CVS42_RS00940 SM00490 helicase superfamily c-terminal domain CVS42_RS00945 SM00155 Phospholipase D. Active site motifs. CVS42_RS00970 SM00342 helix_turn_helix, arabinose operon control protein CVS42_RS00980 SM00354 helix_turn _helix lactose operon repressor CVS42_RS01000 SM00450 Rhodanese Homology Domain CVS42_RS01045 SM00316 Ribosomal protein S1-like RNA-binding domain CVS42_RS01045 SM00732 Likely ribonuclease with RNase H fold. CVS42_RS01055 SM00448 cheY-homologous receiver domain CVS42_RS01055 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS01060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS01060 SM00387 Histidine kinase-like ATPases CVS42_RS01060 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS01070 SM01403 CVS42_RS01070 CVS42_RS01090 SM01382 CVS42_RS01090 CVS42_RS01090 SM01383 CVS42_RS01090 CVS42_RS01105 SM00322 K homology RNA-binding domain CVS42_RS01125 SM01374 CVS42_RS01125 CVS42_RS01195 SM00363 S4 RNA-binding domain CVS42_RS01195 SM01390 CVS42_RS01195 CVS42_RS01200 SM00662 RNA polymerases D CVS42_RS01245 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS01245 SM00267 diguanylate cyclase CVS42_RS01250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS01250 SM00387 Histidine kinase-like ATPases CVS42_RS01250 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS01255 SM00448 cheY-homologous receiver domain CVS42_RS01255 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS01310 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CVS42_RS01310 SM00091 PAS domain CVS42_RS01310 SM00267 diguanylate cyclase CVS42_RS01320 SM00530 Helix-turn-helix XRE-family like proteins CVS42_RS01325 SM00345 helix_turn_helix gluconate operon transcriptional repressor CVS42_RS01325 SM00866 CVS42_RS01325 CVS42_RS01350 SM00382 ATPases associated with a variety of cellular activities CVS42_RS01360 SM00267 diguanylate cyclase CVS42_RS01425 SM00421 helix_turn_helix, Lux Regulon CVS42_RS01430 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS01445 SM01060 CVS42_RS01445 CVS42_RS01455 SM00342 helix_turn_helix, arabinose operon control protein CVS42_RS01455 SM00871 Bacterial transcription activator, effector binding domain CVS42_RS01660 SM00530 Helix-turn-helix XRE-family like proteins CVS42_RS01690 SM00530 Helix-turn-helix XRE-family like proteins CVS42_RS01730 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CVS42_RS01730 SM00267 diguanylate cyclase CVS42_RS01735 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS01735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS01750 SM00052 Putative diguanylate phosphodiesterase CVS42_RS01760 SM00833 Cobalamin synthesis protein cobW C-terminal domain CVS42_RS01795 SM00905 Dihydroneopterin aldolase CVS42_RS01800 SM01207 CVS42_RS01800 CVS42_RS01855 SM00859 Semialdehyde dehydrogenase, NAD binding domain CVS42_RS01905 SM00852 Probable molybdopterin binding domain CVS42_RS01925 SM00344 helix_turn_helix ASNC type CVS42_RS01945 SM00642 Alpha-amylase domain CVS42_RS01985 SM00851 MGS-like domain CVS42_RS02020 SM00260 Two component signalling adaptor domain CVS42_RS02020 SM00448 cheY-homologous receiver domain CVS42_RS02050 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CVS42_RS02095 SM00487 DEAD-like helicases superfamily CVS42_RS02095 SM00490 helicase superfamily c-terminal domain CVS42_RS02130 SM00271 DnaJ molecular chaperone homology domain CVS42_RS02185 SM00387 Histidine kinase-like ATPases CVS42_RS02185 SM00433 TopoisomeraseII CVS42_RS02190 SM00434 DNA Topoisomerase IV CVS42_RS02230 SM00271 DnaJ molecular chaperone homology domain CVS42_RS02270 SM00563 Phosphate acyltransferases CVS42_RS02290 SM00465 GIY-YIG type nucleases (URI domain) CVS42_RS02305 SM00986 Uracil DNA glycosylase superfamily CVS42_RS02305 SM00987 UreE urease accessory protein, C-terminal domain CVS42_RS02325 SM00382 ATPases associated with a variety of cellular activities CVS42_RS02365 SM00347 helix_turn_helix multiple antibiotic resistance protein CVS42_RS02380 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CVS42_RS02385 SM00478 endonuclease III CVS42_RS02385 SM00525 CVS42_RS02385 CVS42_RS02415 SM00267 diguanylate cyclase CVS42_RS02420 SM00316 Ribosomal protein S1-like RNA-binding domain CVS42_RS02420 SM00357 Cold shock protein domain CVS42_RS02420 SM00955 CVS42_RS02420 CVS42_RS02475 SM00382 ATPases associated with a variety of cellular activities CVS42_RS02475 SM01086 C-terminal, D2-small domain, of ClpB protein CVS42_RS02480 SM00382 ATPases associated with a variety of cellular activities CVS42_RS02530 SM00671 Sel1-like repeats. CVS42_RS02565 SM00729 Elongator protein 3, MiaB family, Radical SAM CVS42_RS02590 SM00967 RNA 2'-O ribose methyltransferase substrate binding CVS42_RS02605 SM00487 DEAD-like helicases superfamily CVS42_RS02605 SM00490 helicase superfamily c-terminal domain CVS42_RS02675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS02720 SM00822 CVS42_RS02720 CVS42_RS02765 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CVS42_RS02765 SM00267 diguanylate cyclase CVS42_RS02770 SM00357 Cold shock protein domain CVS42_RS02770 SM00955 CVS42_RS02770 CVS42_RS02785 SM00421 helix_turn_helix, Lux Regulon CVS42_RS02795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS02795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS02800 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CVS42_RS02805 SM00382 ATPases associated with a variety of cellular activities CVS42_RS02935 SM00344 helix_turn_helix ASNC type CVS42_RS02965 SM00642 Alpha-amylase domain CVS42_RS02970 SM00642 Alpha-amylase domain CVS42_RS02985 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CVS42_RS03000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS03000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS03010 SM00244 prohibitin homologues CVS42_RS03050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS03070 SM00382 ATPases associated with a variety of cellular activities CVS42_RS03105 SM00448 cheY-homologous receiver domain CVS42_RS03105 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CVS42_RS03135 SM00487 DEAD-like helicases superfamily CVS42_RS03135 SM00490 helicase superfamily c-terminal domain CVS42_RS03135 SM00847 Helicase associated domain (HA2) Add an annotation CVS42_RS03190 SM00450 Rhodanese Homology Domain CVS42_RS03215 SM00382 ATPases associated with a variety of cellular activities CVS42_RS03240 SM00014 Acid phosphatase homologues CVS42_RS03265 SM00644 CVS42_RS03265 CVS42_RS03275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS03275 SM00387 Histidine kinase-like ATPases CVS42_RS03275 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS03275 SM00448 cheY-homologous receiver domain CVS42_RS03285 SM00954 Region found in RelA / SpoT proteins CVS42_RS03300 SM01192 CVS42_RS03300 CVS42_RS03300 SM01193 CVS42_RS03300 CVS42_RS03345 SM01126 CVS42_RS03345 CVS42_RS03360 SM00382 ATPases associated with a variety of cellular activities CVS42_RS03365 SM00116 Domain in cystathionine beta-synthase and other proteins. CVS42_RS03380 SM00345 helix_turn_helix gluconate operon transcriptional repressor CVS42_RS03470 SM00257 Lysin motif CVS42_RS03530 SM00849 Metallo-beta-lactamase superfamily CVS42_RS03540 SM00487 DEAD-like helicases superfamily CVS42_RS03540 SM00490 helicase superfamily c-terminal domain CVS42_RS03545 SM00267 diguanylate cyclase CVS42_RS03615 SM00387 Histidine kinase-like ATPases CVS42_RS03620 SM00448 cheY-homologous receiver domain CVS42_RS03620 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS03645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS03645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS03655 SM00287 Bacterial SH3 domain homologues CVS42_RS03680 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CVS42_RS03790 SM00358 Double-stranded RNA binding motif CVS42_RS03790 SM00535 Ribonuclease III family CVS42_RS03845 SM00237 Domains in Na-Ca exchangers and integrin-beta4 CVS42_RS03855 SM00052 Putative diguanylate phosphodiesterase CVS42_RS03855 SM00091 PAS domain CVS42_RS03855 SM00267 diguanylate cyclase CVS42_RS03890 SM01057 Eukaryotic-type carbonic anhydrase CVS42_RS03935 SM00100 Cyclic nucleotide-monophosphate binding domain CVS42_RS03935 SM00419 helix_turn_helix, cAMP Regulatory protein CVS42_RS03965 SM00267 diguanylate cyclase CVS42_RS03975 SM00260 Two component signalling adaptor domain CVS42_RS03975 SM00448 cheY-homologous receiver domain CVS42_RS04000 SM00320 WD40 repeats CVS42_RS04010 SM00382 ATPases associated with a variety of cellular activities CVS42_RS04010 SM00448 cheY-homologous receiver domain CVS42_RS04035 SM00978 CVS42_RS04035 CVS42_RS04045 SM00382 ATPases associated with a variety of cellular activities CVS42_RS04050 SM01005 Alanine racemase, C-terminal domain CVS42_RS04070 SM00382 ATPases associated with a variety of cellular activities CVS42_RS04115 SM00421 helix_turn_helix, Lux Regulon CVS42_RS04150 SM00530 Helix-turn-helix XRE-family like proteins CVS42_RS04160 SM00387 Histidine kinase-like ATPases CVS42_RS04160 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS04160 SM00448 cheY-homologous receiver domain CVS42_RS04165 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CVS42_RS04165 SM00495 Chitin-binding domain type 3 CVS42_RS04165 SM00636 CVS42_RS04165 CVS42_RS04170 SM00267 diguanylate cyclase CVS42_RS04175 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CVS42_RS04175 SM00495 Chitin-binding domain type 3 CVS42_RS04175 SM00636 CVS42_RS04175 CVS42_RS04180 SM00495 Chitin-binding domain type 3 CVS42_RS04185 SM00495 Chitin-binding domain type 3 CVS42_RS04225 SM00495 Chitin-binding domain type 3 CVS42_RS04225 SM00636 CVS42_RS04225 CVS42_RS04230 SM00260 Two component signalling adaptor domain CVS42_RS04230 SM00448 cheY-homologous receiver domain CVS42_RS04240 SM00382 ATPases associated with a variety of cellular activities CVS42_RS04255 SM00052 Putative diguanylate phosphodiesterase CVS42_RS04280 SM00450 Rhodanese Homology Domain CVS42_RS04295 SM00852 Probable molybdopterin binding domain CVS42_RS04345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS04345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS04355 SM00870 CVS42_RS04355 CVS42_RS04365 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CVS42_RS04380 SM00729 Elongator protein 3, MiaB family, Radical SAM CVS42_RS04395 SM00936 Penicillin-binding protein 5, C-terminal domain CVS42_RS04475 SM00267 diguanylate cyclase CVS42_RS04495 SM00422 helix_turn_helix, mercury resistance CVS42_RS04505 SM00116 Domain in cystathionine beta-synthase and other proteins. CVS42_RS04505 SM01091 Transporter associated domain CVS42_RS04520 SM00729 Elongator protein 3, MiaB family, Radical SAM CVS42_RS04535 SM00357 Cold shock protein domain CVS42_RS04540 SM00267 diguanylate cyclase CVS42_RS04550 SM00267 diguanylate cyclase CVS42_RS04570 SM00841 Elongation factor P, C-terminal CVS42_RS04570 SM01185 CVS42_RS04570 CVS42_RS04580 SM01240 CVS42_RS04580 CVS42_RS04590 SM00387 Histidine kinase-like ATPases CVS42_RS04590 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS04595 SM00448 cheY-homologous receiver domain CVS42_RS04595 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS04605 SM00822 CVS42_RS04605 CVS42_RS04610 SM01236 CVS42_RS04610 CVS42_RS04690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS04690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS04725 SM00849 Metallo-beta-lactamase superfamily CVS42_RS04735 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS04735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS04750 SM00842 Cell division protein FtsA CVS42_RS04770 SM00965 Secretin and TonB N terminus short domain CVS42_RS04835 SM01150 CVS42_RS04835 CVS42_RS04855 SM00890 Domain of unknown function CVS42_RS04860 SM00642 Alpha-amylase domain CVS42_RS04890 SM01022 CVS42_RS04890 CVS42_RS04895 SM00100 Cyclic nucleotide-monophosphate binding domain CVS42_RS04970 SM01400 CVS42_RS04970 CVS42_RS04995 SM00937 CVS42_RS04995 CVS42_RS05030 SM00986 Uracil DNA glycosylase superfamily CVS42_RS05030 SM00987 UreE urease accessory protein, C-terminal domain CVS42_RS05040 SM00342 helix_turn_helix, arabinose operon control protein CVS42_RS05050 SM00788 Adenylosuccinate synthetase CVS42_RS05080 SM00822 CVS42_RS05080 CVS42_RS05145 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CVS42_RS05145 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CVS42_RS05145 SM00493 CVS42_RS05145 CVS42_RS05155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS05175 SM00382 ATPases associated with a variety of cellular activities CVS42_RS05180 SM00382 ATPases associated with a variety of cellular activities CVS42_RS05200 SM00091 PAS domain CVS42_RS05200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS05200 SM00387 Histidine kinase-like ATPases CVS42_RS05200 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS05200 SM00448 cheY-homologous receiver domain CVS42_RS05255 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CVS42_RS05255 SM00091 PAS domain CVS42_RS05255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS05265 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CVS42_RS05275 SM00852 Probable molybdopterin binding domain CVS42_RS05285 SM00382 ATPases associated with a variety of cellular activities CVS42_RS05300 SM00382 ATPases associated with a variety of cellular activities CVS42_RS05300 SM00448 cheY-homologous receiver domain CVS42_RS05305 SM00387 Histidine kinase-like ATPases CVS42_RS05305 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS05350 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CVS42_RS05375 SM00919 Malic enzyme, NAD binding domain CVS42_RS05375 SM01274 CVS42_RS05375 CVS42_RS05395 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS05400 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS05400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS05405 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS05450 SM00342 helix_turn_helix, arabinose operon control protein CVS42_RS05450 SM00871 Bacterial transcription activator, effector binding domain CVS42_RS05475 SM00382 ATPases associated with a variety of cellular activities CVS42_RS05535 SM00382 ATPases associated with a variety of cellular activities CVS42_RS05535 SM00962 SRP54-type protein, GTPase domain CVS42_RS05550 SM00448 cheY-homologous receiver domain CVS42_RS05560 SM00073 Histidine Phosphotransfer domain CVS42_RS05560 SM00260 Two component signalling adaptor domain CVS42_RS05560 SM00387 Histidine kinase-like ATPases CVS42_RS05560 SM01231 CVS42_RS05560 CVS42_RS05565 SM00448 cheY-homologous receiver domain CVS42_RS05585 SM00260 Two component signalling adaptor domain CVS42_RS05590 SM00260 Two component signalling adaptor domain CVS42_RS05600 SM00382 ATPases associated with a variety of cellular activities CVS42_RS05660 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CVS42_RS05725 SM00354 helix_turn _helix lactose operon repressor CVS42_RS05795 SM00382 ATPases associated with a variety of cellular activities CVS42_RS05875 SM00342 helix_turn_helix, arabinose operon control protein CVS42_RS05965 SM00481 DNA polymerase alpha chain like domain CVS42_RS05985 SM00382 ATPases associated with a variety of cellular activities CVS42_RS06070 SM00530 Helix-turn-helix XRE-family like proteins CVS42_RS06140 SM00528 Domain in histone-like proteins of HNS family CVS42_RS06170 SM00052 Putative diguanylate phosphodiesterase CVS42_RS06185 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS06185 SM00387 Histidine kinase-like ATPases CVS42_RS06185 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS06185 SM00448 cheY-homologous receiver domain CVS42_RS06200 SM00448 cheY-homologous receiver domain CVS42_RS06205 SM00421 helix_turn_helix, Lux Regulon CVS42_RS06205 SM00448 cheY-homologous receiver domain CVS42_RS06245 SM00635 Bacterial Ig-like domain 2 CVS42_RS06255 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS06260 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS06260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS06285 SM00052 Putative diguanylate phosphodiesterase CVS42_RS06285 SM00448 cheY-homologous receiver domain CVS42_RS06290 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS06290 SM00073 Histidine Phosphotransfer domain CVS42_RS06290 SM00387 Histidine kinase-like ATPases CVS42_RS06290 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS06290 SM00448 cheY-homologous receiver domain CVS42_RS06345 SM00897 FIST N domain CVS42_RS06345 SM01204 CVS42_RS06345 CVS42_RS06350 SM00387 Histidine kinase-like ATPases CVS42_RS06350 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS06350 SM00448 cheY-homologous receiver domain CVS42_RS06355 SM00464 Found in ATP-dependent protease La (LON) CVS42_RS06360 SM00421 helix_turn_helix, Lux Regulon CVS42_RS06360 SM00448 cheY-homologous receiver domain CVS42_RS06365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS06365 SM00387 Histidine kinase-like ATPases CVS42_RS06370 SM00729 Elongator protein 3, MiaB family, Radical SAM CVS42_RS06385 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CVS42_RS06410 SM00852 Probable molybdopterin binding domain CVS42_RS06440 SM00382 ATPases associated with a variety of cellular activities CVS42_RS06465 SM00852 Probable molybdopterin binding domain CVS42_RS06475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS06475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS06480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS06480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS06500 SM00867 YceI-like domain CVS42_RS06510 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CVS42_RS06520 SM00563 Phosphate acyltransferases CVS42_RS06545 SM00849 Metallo-beta-lactamase superfamily CVS42_RS06560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS06560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS06585 SM00855 Phosphoglycerate mutase family CVS42_RS06630 SM00155 Phospholipase D. Active site motifs. CVS42_RS06710 SM00448 cheY-homologous receiver domain CVS42_RS06710 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS06715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS06715 SM00387 Histidine kinase-like ATPases CVS42_RS06715 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS06720 SM00487 DEAD-like helicases superfamily CVS42_RS06720 SM00490 helicase superfamily c-terminal domain CVS42_RS06740 SM00257 Lysin motif CVS42_RS06745 SM00849 Metallo-beta-lactamase superfamily CVS42_RS06760 SM00479 CVS42_RS06760 CVS42_RS06770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CVS42_RS06795 SM00382 ATPases associated with a variety of cellular activities CVS42_RS06850 SM00028 Tetratricopeptide repeats CVS42_RS06850 SM00448 cheY-homologous receiver domain CVS42_RS06880 SM00267 diguanylate cyclase CVS42_RS06975 SM00477 DNA/RNA non-specific endonuclease CVS42_RS06975 SM00892 DNA/RNA non-specific endonuclease CVS42_RS06985 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS06985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS06995 SM00342 helix_turn_helix, arabinose operon control protein CVS42_RS07000 SM01329 CVS42_RS07000 CVS42_RS07150 SM01126 CVS42_RS07150 CVS42_RS07230 SM00091 PAS domain CVS42_RS07230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS07240 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CVS42_RS07310 SM00382 ATPases associated with a variety of cellular activities CVS42_RS07370 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS07370 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CVS42_RS07385 SM00382 ATPases associated with a variety of cellular activities CVS42_RS07390 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS07390 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CVS42_RS07480 SM00829 Enoylreductase CVS42_RS07490 SM00116 Domain in cystathionine beta-synthase and other proteins. CVS42_RS07490 SM01091 Transporter associated domain CVS42_RS07515 SM00487 DEAD-like helicases superfamily CVS42_RS07515 SM00490 helicase superfamily c-terminal domain CVS42_RS07525 SM00327 von Willebrand factor (vWF) type A domain CVS42_RS07550 SM00116 Domain in cystathionine beta-synthase and other proteins. CVS42_RS07565 SM01323 CVS42_RS07565 CVS42_RS07580 SM00450 Rhodanese Homology Domain CVS42_RS07585 SM00028 Tetratricopeptide repeats CVS42_RS07635 SM00271 DnaJ molecular chaperone homology domain CVS42_RS07660 SM00562 CVS42_RS07660 CVS42_RS07670 SM00028 Tetratricopeptide repeats CVS42_RS07675 SM00530 Helix-turn-helix XRE-family like proteins CVS42_RS07695 SM00564 beta-propeller repeat CVS42_RS07715 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS07720 SM01211 CVS42_RS07720 CVS42_RS07730 SM00479 CVS42_RS07730 CVS42_RS07735 SM00014 Acid phosphatase homologues CVS42_RS07745 SM00859 Semialdehyde dehydrogenase, NAD binding domain CVS42_RS07870 SM00382 ATPases associated with a variety of cellular activities CVS42_RS07980 SM00671 Sel1-like repeats. CVS42_RS08165 SM00857 Resolvase, N terminal domain CVS42_RS08190 SM00528 Domain in histone-like proteins of HNS family CVS42_RS08200 SM00342 helix_turn_helix, arabinose operon control protein CVS42_RS08215 SM00849 Metallo-beta-lactamase superfamily CVS42_RS08270 SM00493 CVS42_RS08270 CVS42_RS08275 SM00387 Histidine kinase-like ATPases CVS42_RS08280 SM00382 ATPases associated with a variety of cellular activities CVS42_RS08285 SM00382 ATPases associated with a variety of cellular activities CVS42_RS08305 SM00382 ATPases associated with a variety of cellular activities CVS42_RS08350 SM00091 PAS domain CVS42_RS08350 SM00382 ATPases associated with a variety of cellular activities CVS42_RS08360 SM00267 diguanylate cyclase CVS42_RS08450 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS08510 SM00387 Histidine kinase-like ATPases CVS42_RS08510 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS08510 SM00448 cheY-homologous receiver domain CVS42_RS08515 SM00382 ATPases associated with a variety of cellular activities CVS42_RS08520 SM00382 ATPases associated with a variety of cellular activities CVS42_RS08605 SM00861 Transketolase, pyrimidine binding domain CVS42_RS08620 SM00881 CoA binding domain CVS42_RS08635 SM00382 ATPases associated with a variety of cellular activities CVS42_RS08645 SM00345 helix_turn_helix gluconate operon transcriptional repressor CVS42_RS08645 SM00866 CVS42_RS08645 CVS42_RS08735 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS08735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS08735 SM01049 CVS42_RS08735 CVS42_RS08745 SM01144 CVS42_RS08745 CVS42_RS08765 SM00342 helix_turn_helix, arabinose operon control protein CVS42_RS08780 SM00642 Alpha-amylase domain CVS42_RS08815 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS08840 SM00382 ATPases associated with a variety of cellular activities CVS42_RS08850 SM00518 AP endonuclease family 2 CVS42_RS08875 SM00090 RIO-like kinase CVS42_RS08885 SM00267 diguanylate cyclase CVS42_RS08895 SM00486 DNA polymerase type-B family CVS42_RS08945 SM00825 Beta-ketoacyl synthase CVS42_RS08960 SM00487 DEAD-like helicases superfamily CVS42_RS08960 SM00490 helicase superfamily c-terminal domain CVS42_RS08985 SM00345 helix_turn_helix gluconate operon transcriptional repressor CVS42_RS08995 SM01322 CVS42_RS08995 CVS42_RS09010 SM00382 ATPases associated with a variety of cellular activities CVS42_RS09095 SM00347 helix_turn_helix multiple antibiotic resistance protein CVS42_RS09315 SM01092 CO dehydrogenase flavoprotein C-terminal domain CVS42_RS09320 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CVS42_RS09340 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CVS42_RS09345 SM01092 CO dehydrogenase flavoprotein C-terminal domain CVS42_RS09370 SM00091 PAS domain CVS42_RS09370 SM00267 diguanylate cyclase CVS42_RS09425 SM00491 CVS42_RS09425 CVS42_RS09450 SM00341 Helicase and RNase D C-terminal CVS42_RS09450 SM00474 3'-5' exonuclease CVS42_RS09460 SM00849 Metallo-beta-lactamase superfamily CVS42_RS09465 SM00450 Rhodanese Homology Domain CVS42_RS09500 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CVS42_RS09505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS09505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS09515 SM00880 CVS42_RS09515 CVS42_RS09550 SM00925 MltA specific insert domain CVS42_RS09580 SM00434 DNA Topoisomerase IV CVS42_RS09585 SM00642 Alpha-amylase domain CVS42_RS09590 SM00729 Elongator protein 3, MiaB family, Radical SAM CVS42_RS09595 SM00671 Sel1-like repeats. CVS42_RS09600 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CVS42_RS09625 SM00873 B3/4 domain CVS42_RS09625 SM00874 tRNA synthetase B5 domain CVS42_RS09625 SM00896 Ferredoxin-fold anticodon binding domain CVS42_RS09630 SM00411 bacterial (prokaryotic) histone like domain CVS42_RS09635 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS09635 SM00387 Histidine kinase-like ATPases CVS42_RS09635 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS09635 SM00448 cheY-homologous receiver domain CVS42_RS09660 SM00267 diguanylate cyclase CVS42_RS09665 SM00354 helix_turn _helix lactose operon repressor CVS42_RS09685 SM00382 ATPases associated with a variety of cellular activities CVS42_RS09705 SM00953 CVS42_RS09705 CVS42_RS09730 SM00382 ATPases associated with a variety of cellular activities CVS42_RS09755 SM00100 Cyclic nucleotide-monophosphate binding domain CVS42_RS09755 SM00419 helix_turn_helix, cAMP Regulatory protein CVS42_RS09810 SM00945 ProQ/FINO family CVS42_RS09815 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CVS42_RS09815 SM00245 tail specific protease CVS42_RS09860 SM00981 CVS42_RS09860 CVS42_RS09870 SM00382 ATPases associated with a variety of cellular activities CVS42_RS09980 SM00822 CVS42_RS09980 CVS42_RS10070 SM00382 ATPases associated with a variety of cellular activities CVS42_RS10090 SM00825 Beta-ketoacyl synthase CVS42_RS10100 SM00822 CVS42_RS10100 CVS42_RS10105 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CVS42_RS10140 SM00363 S4 RNA-binding domain CVS42_RS10145 SM00316 Ribosomal protein S1-like RNA-binding domain CVS42_RS10170 SM00354 helix_turn _helix lactose operon repressor CVS42_RS10200 SM00487 DEAD-like helicases superfamily CVS42_RS10200 SM00490 helicase superfamily c-terminal domain CVS42_RS10220 SM00463 Small MutS-related domain CVS42_RS10225 SM00091 PAS domain CVS42_RS10225 SM00267 diguanylate cyclase CVS42_RS10230 SM00855 Phosphoglycerate mutase family CVS42_RS10240 SM00495 Chitin-binding domain type 3 CVS42_RS10255 SM00782 PhnA Zinc-Ribbon CVS42_RS10290 SM00487 DEAD-like helicases superfamily CVS42_RS10290 SM00490 helicase superfamily c-terminal domain CVS42_RS10295 SM00763 PrkA AAA domain CVS42_RS10335 SM00327 von Willebrand factor (vWF) type A domain CVS42_RS10340 SM00028 Tetratricopeptide repeats CVS42_RS10370 SM00052 Putative diguanylate phosphodiesterase CVS42_RS10380 SM00422 helix_turn_helix, mercury resistance CVS42_RS10395 SM00382 ATPases associated with a variety of cellular activities CVS42_RS10395 SM00487 DEAD-like helicases superfamily CVS42_RS10395 SM00490 helicase superfamily c-terminal domain CVS42_RS10395 SM00847 Helicase associated domain (HA2) Add an annotation CVS42_RS10400 SM00116 Domain in cystathionine beta-synthase and other proteins. CVS42_RS10405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CVS42_RS10430 SM00327 von Willebrand factor (vWF) type A domain CVS42_RS10435 SM00327 von Willebrand factor (vWF) type A domain CVS42_RS10515 SM00859 Semialdehyde dehydrogenase, NAD binding domain CVS42_RS10525 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CVS42_RS10525 SM00382 ATPases associated with a variety of cellular activities CVS42_RS10550 SM00954 Region found in RelA / SpoT proteins CVS42_RS10650 SM00382 ATPases associated with a variety of cellular activities CVS42_RS10655 SM00382 ATPases associated with a variety of cellular activities CVS42_RS10705 SM00267 diguanylate cyclase CVS42_RS10800 SM00331 Sigma factor PP2C-like phosphatases CVS42_RS10800 SM00448 cheY-homologous receiver domain CVS42_RS10830 SM00387 Histidine kinase-like ATPases CVS42_RS10830 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS10830 SM00448 cheY-homologous receiver domain CVS42_RS10860 SM00822 CVS42_RS10860 CVS42_RS10900 SM00878 Biotin carboxylase C-terminal domain CVS42_RS10900 SM01209 CVS42_RS10900 CVS42_RS10910 SM00422 helix_turn_helix, mercury resistance CVS42_RS10915 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS10980 SM00530 Helix-turn-helix XRE-family like proteins CVS42_RS10990 SM00100 Cyclic nucleotide-monophosphate binding domain CVS42_RS10990 SM00116 Domain in cystathionine beta-synthase and other proteins. CVS42_RS10995 SM00479 CVS42_RS10995 CVS42_RS11100 SM00528 Domain in histone-like proteins of HNS family CVS42_RS11315 SM00530 Helix-turn-helix XRE-family like proteins CVS42_RS11330 SM00530 Helix-turn-helix XRE-family like proteins CVS42_RS11375 SM00382 ATPases associated with a variety of cellular activities CVS42_RS11385 SM00411 bacterial (prokaryotic) histone like domain CVS42_RS11390 SM00382 ATPases associated with a variety of cellular activities CVS42_RS11390 SM00464 Found in ATP-dependent protease La (LON) CVS42_RS11395 SM00382 ATPases associated with a variety of cellular activities CVS42_RS11395 SM00994 ClpX C4-type zinc finger CVS42_RS11395 SM01086 C-terminal, D2-small domain, of ClpB protein CVS42_RS11420 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CVS42_RS11430 SM00382 ATPases associated with a variety of cellular activities CVS42_RS11445 SM00487 DEAD-like helicases superfamily CVS42_RS11445 SM00490 helicase superfamily c-terminal domain CVS42_RS11445 SM00982 CVS42_RS11445 CVS42_RS11445 SM01058 CarD-like/TRCF domain CVS42_RS11470 SM00855 Phosphoglycerate mutase family CVS42_RS11485 SM00364 Leucine-rich repeats, bacterial type CVS42_RS11485 SM00369 Leucine-rich repeats, typical (most populated) subfamily CVS42_RS11515 SM00116 Domain in cystathionine beta-synthase and other proteins. CVS42_RS11515 SM01240 CVS42_RS11515 CVS42_RS11540 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CVS42_RS11550 SM00487 DEAD-like helicases superfamily CVS42_RS11550 SM00490 helicase superfamily c-terminal domain CVS42_RS11555 SM00729 Elongator protein 3, MiaB family, Radical SAM CVS42_RS11560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS11560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS11580 SM00893 Electron transfer flavoprotein domain CVS42_RS11585 SM00893 Electron transfer flavoprotein domain CVS42_RS11630 SM00052 Putative diguanylate phosphodiesterase CVS42_RS11630 SM00267 diguanylate cyclase CVS42_RS11685 SM00382 ATPases associated with a variety of cellular activities CVS42_RS11695 SM00843 CVS42_RS11695 CVS42_RS11700 SM00344 helix_turn_helix ASNC type CVS42_RS11705 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CVS42_RS11705 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CVS42_RS11715 SM00267 diguanylate cyclase CVS42_RS11715 SM00448 cheY-homologous receiver domain CVS42_RS11735 SM00316 Ribosomal protein S1-like RNA-binding domain CVS42_RS11740 SM00382 ATPases associated with a variety of cellular activities CVS42_RS11740 SM01086 C-terminal, D2-small domain, of ClpB protein CVS42_RS11750 SM00357 Cold shock protein domain CVS42_RS11775 SM00448 cheY-homologous receiver domain CVS42_RS11775 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS11780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS11780 SM00387 Histidine kinase-like ATPases CVS42_RS11780 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS11805 SM00671 Sel1-like repeats. CVS42_RS11825 SM01154 CVS42_RS11825 CVS42_RS11840 SM00528 Domain in histone-like proteins of HNS family CVS42_RS11865 SM01144 CVS42_RS11865 CVS42_RS11875 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CVS42_RS11880 SM00028 Tetratricopeptide repeats CVS42_RS11890 SM00411 bacterial (prokaryotic) histone like domain CVS42_RS11895 SM00316 Ribosomal protein S1-like RNA-binding domain CVS42_RS11945 SM00052 Putative diguanylate phosphodiesterase CVS42_RS11945 SM00267 diguanylate cyclase CVS42_RS11955 SM00448 cheY-homologous receiver domain CVS42_RS11960 SM00091 PAS domain CVS42_RS11985 SM00360 RNA recognition motif CVS42_RS11995 SM00382 ATPases associated with a variety of cellular activities CVS42_RS12005 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS12005 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CVS42_RS12115 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CVS42_RS12120 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CVS42_RS12120 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CVS42_RS12160 SM00897 FIST N domain CVS42_RS12160 SM01204 CVS42_RS12160 CVS42_RS12165 SM00091 PAS domain CVS42_RS12165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CVS42_RS12170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CVS42_RS12175 SM00052 Putative diguanylate phosphodiesterase CVS42_RS12175 SM00267 diguanylate cyclase CVS42_RS12195 SM00052 Putative diguanylate phosphodiesterase CVS42_RS12195 SM00267 diguanylate cyclase CVS42_RS12215 SM00382 ATPases associated with a variety of cellular activities CVS42_RS12220 SM00729 Elongator protein 3, MiaB family, Radical SAM CVS42_RS12245 SM00487 DEAD-like helicases superfamily CVS42_RS12245 SM00490 helicase superfamily c-terminal domain CVS42_RS12265 SM00899 CVS42_RS12265 CVS42_RS12295 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS12305 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS12315 SM00487 DEAD-like helicases superfamily CVS42_RS12320 SM00840 CVS42_RS12320 CVS42_RS12345 SM00387 Histidine kinase-like ATPases CVS42_RS12345 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS12350 SM00448 cheY-homologous receiver domain CVS42_RS12350 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS12400 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CVS42_RS12400 SM00465 GIY-YIG type nucleases (URI domain) CVS42_RS12405 SM00421 helix_turn_helix, Lux Regulon CVS42_RS12405 SM00448 cheY-homologous receiver domain CVS42_RS12425 SM00382 ATPases associated with a variety of cellular activities CVS42_RS12430 SM00849 Metallo-beta-lactamase superfamily CVS42_RS12480 SM00420 helix_turn_helix, Deoxyribose operon repressor CVS42_RS12480 SM01134 CVS42_RS12480 CVS42_RS12500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS12500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS12600 SM00345 helix_turn_helix gluconate operon transcriptional repressor CVS42_RS12635 SM00363 S4 RNA-binding domain CVS42_RS12655 SM00507 HNH nucleases CVS42_RS12680 SM00900 CVS42_RS12680 CVS42_RS12690 SM00478 endonuclease III CVS42_RS12690 SM00525 CVS42_RS12690 CVS42_RS12730 SM00851 MGS-like domain CVS42_RS12730 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CVS42_RS12735 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CVS42_RS12780 SM00382 ATPases associated with a variety of cellular activities CVS42_RS12790 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS12800 SM00382 ATPases associated with a variety of cellular activities CVS42_RS12810 SM01005 Alanine racemase, C-terminal domain CVS42_RS12820 SM00382 ATPases associated with a variety of cellular activities CVS42_RS12825 SM00382 ATPases associated with a variety of cellular activities CVS42_RS12865 SM00834 Putative regulatory protein CVS42_RS12900 SM01126 CVS42_RS12900 CVS42_RS12910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS12910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS12960 SM00984 UDP binding domain CVS42_RS13040 SM00822 CVS42_RS13040 CVS42_RS13065 SM00858 CVS42_RS13065 CVS42_RS13155 SM00981 CVS42_RS13155 CVS42_RS13175 SM01359 CVS42_RS13175 CVS42_RS13175 SM01360 CVS42_RS13175 CVS42_RS13185 SM00450 Rhodanese Homology Domain CVS42_RS13190 SM00052 Putative diguanylate phosphodiesterase CVS42_RS13190 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CVS42_RS13190 SM00091 PAS domain CVS42_RS13190 SM00267 diguanylate cyclase CVS42_RS13235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS13235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS13265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS13265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS13325 SM00830 Chorismate mutase type II CVS42_RS13335 SM00491 CVS42_RS13335 CVS42_RS13355 SM00098 Alkaline phosphatase homologues CVS42_RS13360 SM00098 Alkaline phosphatase homologues CVS42_RS13380 SM00421 helix_turn_helix, Lux Regulon CVS42_RS13380 SM00448 cheY-homologous receiver domain CVS42_RS13385 SM00387 Histidine kinase-like ATPases CVS42_RS13395 SM00267 diguanylate cyclase CVS42_RS13400 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS13400 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CVS42_RS13410 SM00382 ATPases associated with a variety of cellular activities CVS42_RS13415 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS13440 SM01091 Transporter associated domain CVS42_RS13450 SM00382 ATPases associated with a variety of cellular activities CVS42_RS13515 SM00382 ATPases associated with a variety of cellular activities CVS42_RS13515 SM00448 cheY-homologous receiver domain CVS42_RS13520 SM00091 PAS domain CVS42_RS13520 SM00387 Histidine kinase-like ATPases CVS42_RS13520 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS13525 SM00382 ATPases associated with a variety of cellular activities CVS42_RS13550 SM00116 Domain in cystathionine beta-synthase and other proteins. CVS42_RS13550 SM00924 MgtE intracellular N domain CVS42_RS13565 SM00047 Lysozyme subfamily 2 CVS42_RS13610 SM00138 Methyltransferase, chemotaxis proteins CVS42_RS13615 SM00260 Two component signalling adaptor domain CVS42_RS13615 SM00448 cheY-homologous receiver domain CVS42_RS13620 SM00858 CVS42_RS13620 CVS42_RS13650 SM00363 S4 RNA-binding domain CVS42_RS13655 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CVS42_RS13680 SM00420 helix_turn_helix, Deoxyribose operon repressor CVS42_RS13680 SM01134 CVS42_RS13680 CVS42_RS13710 SM00357 Cold shock protein domain CVS42_RS13720 SM00861 Transketolase, pyrimidine binding domain CVS42_RS13735 SM00823 Phosphopantetheine attachment site CVS42_RS13770 SM00354 helix_turn _helix lactose operon repressor CVS42_RS13780 SM00052 Putative diguanylate phosphodiesterase CVS42_RS13780 SM00267 diguanylate cyclase CVS42_RS13855 SM00382 ATPases associated with a variety of cellular activities CVS42_RS13870 SM00347 helix_turn_helix multiple antibiotic resistance protein CVS42_RS13925 SM01081 Putative carbohydrate binding domain CVS42_RS13955 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CVS42_RS13960 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CVS42_RS13965 SM00448 cheY-homologous receiver domain CVS42_RS13965 SM00850 LytTr DNA-binding domain CVS42_RS13985 SM00487 DEAD-like helicases superfamily CVS42_RS13985 SM00490 helicase superfamily c-terminal domain CVS42_RS14025 SM00890 Domain of unknown function CVS42_RS14035 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS14045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS14070 SM00729 Elongator protein 3, MiaB family, Radical SAM CVS42_RS14070 SM00876 Biotin and Thiamin Synthesis associated domain CVS42_RS14080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS14145 SM01091 Transporter associated domain CVS42_RS14165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS14165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS14225 SM00091 PAS domain CVS42_RS14225 SM00267 diguanylate cyclase CVS42_RS14240 SM00382 ATPases associated with a variety of cellular activities CVS42_RS14270 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CVS42_RS14295 SM00354 helix_turn _helix lactose operon repressor CVS42_RS14300 SM00640 Glycosyl hydrolases family 32 CVS42_RS14320 SM00271 DnaJ molecular chaperone homology domain CVS42_RS14345 SM01131 CVS42_RS14345 CVS42_RS14355 SM00382 ATPases associated with a variety of cellular activities CVS42_RS14365 SM00528 Domain in histone-like proteins of HNS family CVS42_RS14410 SM00822 CVS42_RS14410 CVS42_RS14465 SM00382 ATPases associated with a variety of cellular activities CVS42_RS14600 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CVS42_RS14605 SM00729 Elongator protein 3, MiaB family, Radical SAM CVS42_RS14620 SM01321 CVS42_RS14620 CVS42_RS14670 SM00363 S4 RNA-binding domain CVS42_RS14690 SM00481 DNA polymerase alpha chain like domain CVS42_RS14770 SM00382 ATPases associated with a variety of cellular activities CVS42_RS14780 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CVS42_RS14805 SM00448 cheY-homologous receiver domain CVS42_RS14805 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS14820 SM00382 ATPases associated with a variety of cellular activities CVS42_RS14825 SM00382 ATPases associated with a variety of cellular activities CVS42_RS14860 SM00448 cheY-homologous receiver domain CVS42_RS14860 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS14865 SM00387 Histidine kinase-like ATPases CVS42_RS14890 SM00530 Helix-turn-helix XRE-family like proteins CVS42_RS14985 SM00267 diguanylate cyclase CVS42_RS15010 SM00382 ATPases associated with a variety of cellular activities CVS42_RS15025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS15025 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CVS42_RS15030 SM00382 ATPases associated with a variety of cellular activities CVS42_RS15050 SM00382 ATPases associated with a variety of cellular activities CVS42_RS15105 SM00671 Sel1-like repeats. CVS42_RS15140 SM01321 CVS42_RS15140 CVS42_RS15150 SM00671 Sel1-like repeats. CVS42_RS15185 SM00528 Domain in histone-like proteins of HNS family CVS42_RS15215 SM00530 Helix-turn-helix XRE-family like proteins CVS42_RS15310 SM00487 DEAD-like helicases superfamily CVS42_RS15390 SM00729 Elongator protein 3, MiaB family, Radical SAM CVS42_RS15405 SM00267 diguanylate cyclase CVS42_RS15420 SM00530 Helix-turn-helix XRE-family like proteins CVS42_RS15440 SM00919 Malic enzyme, NAD binding domain CVS42_RS15440 SM01274 CVS42_RS15440 CVS42_RS15445 SM00342 helix_turn_helix, arabinose operon control protein CVS42_RS15460 SM00267 diguanylate cyclase CVS42_RS15545 SM00091 PAS domain CVS42_RS15545 SM00387 Histidine kinase-like ATPases CVS42_RS15545 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS15550 SM00448 cheY-homologous receiver domain CVS42_RS15550 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS15560 SM00382 ATPases associated with a variety of cellular activities CVS42_RS15570 SM00342 helix_turn_helix, arabinose operon control protein CVS42_RS15580 SM00448 cheY-homologous receiver domain CVS42_RS15585 SM00387 Histidine kinase-like ATPases CVS42_RS15590 SM00919 Malic enzyme, NAD binding domain CVS42_RS15590 SM01274 CVS42_RS15590 CVS42_RS15605 SM00347 helix_turn_helix multiple antibiotic resistance protein CVS42_RS15620 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS15655 SM00292 breast cancer carboxy-terminal domain CVS42_RS15655 SM00532 Ligase N family CVS42_RS15660 SM00771 ZipA, C-terminal domain (FtsZ-binding) CVS42_RS15695 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS15720 SM00642 Alpha-amylase domain CVS42_RS15730 SM00421 helix_turn_helix, Lux Regulon CVS42_RS15730 SM00448 cheY-homologous receiver domain CVS42_RS15755 SM00267 diguanylate cyclase CVS42_RS15760 SM00977 TilS substrate C-terminal domain CVS42_RS15790 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS15810 SM00849 Metallo-beta-lactamase superfamily CVS42_RS15850 SM00363 S4 RNA-binding domain CVS42_RS15875 SM00421 helix_turn_helix, Lux Regulon CVS42_RS15890 SM00829 Enoylreductase CVS42_RS15900 SM00861 Transketolase, pyrimidine binding domain CVS42_RS15910 SM00731 SprT homologues. CVS42_RS15935 SM00732 Likely ribonuclease with RNase H fold. CVS42_RS15965 SM00460 Transglutaminase/protease-like homologues CVS42_RS15990 SM00481 DNA polymerase alpha chain like domain CVS42_RS16020 SM00935 Outer membrane protein (OmpH-like) CVS42_RS16030 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CVS42_RS16075 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CVS42_RS16155 SM00028 Tetratricopeptide repeats CVS42_RS16160 SM00267 diguanylate cyclase CVS42_RS16170 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CVS42_RS16170 SM00475 5'-3' exonuclease CVS42_RS16175 SM01329 CVS42_RS16175 CVS42_RS16205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS16205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS16275 SM00900 CVS42_RS16275 CVS42_RS16355 SM00422 helix_turn_helix, mercury resistance CVS42_RS16390 SM00830 Chorismate mutase type II CVS42_RS16415 SM00671 Sel1-like repeats. CVS42_RS16445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS16475 SM00463 Small MutS-related domain CVS42_RS16515 SM00342 helix_turn_helix, arabinose operon control protein CVS42_RS16515 SM00478 endonuclease III CVS42_RS16515 SM01009 AlkA N-terminal domain CVS42_RS16545 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS16550 SM00448 cheY-homologous receiver domain CVS42_RS16560 SM00073 Histidine Phosphotransfer domain CVS42_RS16560 SM00260 Two component signalling adaptor domain CVS42_RS16560 SM00387 Histidine kinase-like ATPases CVS42_RS16560 SM01231 CVS42_RS16560 CVS42_RS16565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS16565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS16570 SM00260 Two component signalling adaptor domain CVS42_RS16575 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS16580 SM00138 Methyltransferase, chemotaxis proteins CVS42_RS16590 SM00448 cheY-homologous receiver domain CVS42_RS16595 SM00316 Ribosomal protein S1-like RNA-binding domain CVS42_RS16595 SM00322 K homology RNA-binding domain CVS42_RS16600 SM01387 CVS42_RS16600 CVS42_RS16620 SM00316 Ribosomal protein S1-like RNA-binding domain CVS42_RS16660 SM00382 ATPases associated with a variety of cellular activities CVS42_RS16670 SM01103 CVS42_RS16670 CVS42_RS16705 SM00861 Transketolase, pyrimidine binding domain CVS42_RS16725 SM00382 ATPases associated with a variety of cellular activities CVS42_RS16750 SM00020 Trypsin-like serine protease CVS42_RS16790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS16790 SM00387 Histidine kinase-like ATPases CVS42_RS16790 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS16790 SM00448 cheY-homologous receiver domain CVS42_RS16805 SM00448 cheY-homologous receiver domain CVS42_RS16805 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS16830 SM00052 Putative diguanylate phosphodiesterase CVS42_RS16830 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CVS42_RS16830 SM00091 PAS domain CVS42_RS16830 SM00267 diguanylate cyclase CVS42_RS16855 SM00878 Biotin carboxylase C-terminal domain CVS42_RS16880 SM00829 Enoylreductase CVS42_RS16890 SM01266 CVS42_RS16890 CVS42_RS16915 SM00028 Tetratricopeptide repeats CVS42_RS16965 SM00382 ATPases associated with a variety of cellular activities CVS42_RS16970 SM00382 ATPases associated with a variety of cellular activities CVS42_RS16980 SM00984 UDP binding domain CVS42_RS17015 SM00382 ATPases associated with a variety of cellular activities CVS42_RS17040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS17040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS17050 SM00357 Cold shock protein domain CVS42_RS17090 SM00479 CVS42_RS17090 CVS42_RS17125 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CVS42_RS17155 SM00271 DnaJ molecular chaperone homology domain CVS42_RS17185 SM00650 Ribosomal RNA adenine dimethylases CVS42_RS17200 SM00530 Helix-turn-helix XRE-family like proteins CVS42_RS17250 SM00244 prohibitin homologues CVS42_RS17255 SM00244 prohibitin homologues CVS42_RS17275 SM00853 MutL C terminal dimerisation domain CVS42_RS17275 SM01340 CVS42_RS17275 CVS42_RS17280 SM00257 Lysin motif CVS42_RS17280 SM00646 CVS42_RS17280 CVS42_RS17310 SM00382 ATPases associated with a variety of cellular activities CVS42_RS17310 SM00930 CVS42_RS17310 CVS42_RS17325 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CVS42_RS17330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS17330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS17340 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CVS42_RS17345 SM00073 Histidine Phosphotransfer domain CVS42_RS17345 SM00091 PAS domain CVS42_RS17345 SM00387 Histidine kinase-like ATPases CVS42_RS17345 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS17345 SM00448 cheY-homologous receiver domain CVS42_RS17390 SM01130 CVS42_RS17390 CVS42_RS17425 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CVS42_RS17440 SM00448 cheY-homologous receiver domain CVS42_RS17450 SM00382 ATPases associated with a variety of cellular activities CVS42_RS17540 SM00014 Acid phosphatase homologues CVS42_RS17550 SM00917 LeuA allosteric (dimerisation) domain CVS42_RS17555 SM01329 CVS42_RS17555 CVS42_RS17590 SM00382 ATPases associated with a variety of cellular activities CVS42_RS17595 SM00670 Large family of predicted nucleotide-binding domains CVS42_RS17635 SM00052 Putative diguanylate phosphodiesterase CVS42_RS17635 SM00267 diguanylate cyclase CVS42_RS17650 SM00883 Chaperonin 10 Kd subunit CVS42_RS17690 SM00400 zinc finger CVS42_RS17690 SM00493 CVS42_RS17690 CVS42_RS17690 SM00766 DNA primase DnaG DnaB-binding CVS42_RS17710 SM00382 ATPases associated with a variety of cellular activities CVS42_RS17765 SM01209 CVS42_RS17765 CVS42_RS17765 SM01210 CVS42_RS17765 CVS42_RS17770 SM00798 AICARFT/IMPCHase bienzyme CVS42_RS17770 SM00851 MGS-like domain CVS42_RS17775 SM00422 helix_turn_helix, mercury resistance CVS42_RS17835 SM00347 helix_turn_helix multiple antibiotic resistance protein CVS42_RS17845 SM00822 CVS42_RS17845 CVS42_RS17850 SM00028 Tetratricopeptide repeats CVS42_RS17850 SM00267 diguanylate cyclase CVS42_RS17855 SM00327 von Willebrand factor (vWF) type A domain CVS42_RS17860 SM00382 ATPases associated with a variety of cellular activities CVS42_RS17905 SM00829 Enoylreductase CVS42_RS17965 SM00411 bacterial (prokaryotic) histone like domain CVS42_RS17980 SM00382 ATPases associated with a variety of cellular activities CVS42_RS18020 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CVS42_RS18025 SM01133 CVS42_RS18025 CVS42_RS18065 SM00938 Nitrogen regulatory protein P-II CVS42_RS18150 SM00904 Riboflavin kinase CVS42_RS18165 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CVS42_RS18195 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CVS42_RS18205 SM00927 DNA mismatch repair enzyme MutH CVS42_RS18235 SM00382 ATPases associated with a variety of cellular activities CVS42_RS18235 SM00962 SRP54-type protein, GTPase domain CVS42_RS18235 SM00963 SRP54-type protein, helical bundle domain CVS42_RS18245 SM01091 Transporter associated domain CVS42_RS18260 SM00671 Sel1-like repeats. CVS42_RS18280 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS18285 SM00382 ATPases associated with a variety of cellular activities CVS42_RS18300 SM00382 ATPases associated with a variety of cellular activities CVS42_RS18315 SM00938 Nitrogen regulatory protein P-II CVS42_RS18345 SM00382 ATPases associated with a variety of cellular activities CVS42_RS18365 SM01152 CVS42_RS18365 CVS42_RS18440 SM00487 DEAD-like helicases superfamily CVS42_RS18440 SM00490 helicase superfamily c-terminal domain CVS42_RS18510 SM00245 tail specific protease CVS42_RS18570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS18570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS18570 SM01049 CVS42_RS18570 CVS42_RS18585 SM00382 ATPases associated with a variety of cellular activities CVS42_RS18615 SM01266 CVS42_RS18615 CVS42_RS18655 SM00342 helix_turn_helix, arabinose operon control protein CVS42_RS18695 SM00345 helix_turn_helix gluconate operon transcriptional repressor CVS42_RS18695 SM00895 CVS42_RS18695 CVS42_RS18700 SM00644 CVS42_RS18700 CVS42_RS18760 SM00957 SecA DEAD-like domain CVS42_RS18760 SM00958 SecA preprotein cross-linking domain CVS42_RS18775 SM00864 Tubulin/FtsZ family, GTPase domain CVS42_RS18775 SM00865 Tubulin/FtsZ family, C-terminal domain CVS42_RS18780 SM00842 Cell division protein FtsA CVS42_RS18970 SM00858 CVS42_RS18970 CVS42_RS19015 SM00382 ATPases associated with a variety of cellular activities CVS42_RS19015 SM00448 cheY-homologous receiver domain CVS42_RS19080 SM00749 bacterial OsmY and nodulation domain CVS42_RS19130 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CVS42_RS19135 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CVS42_RS19210 SM00382 ATPases associated with a variety of cellular activities CVS42_RS19230 SM00116 Domain in cystathionine beta-synthase and other proteins. CVS42_RS19235 SM00382 ATPases associated with a variety of cellular activities CVS42_RS19290 SM00100 Cyclic nucleotide-monophosphate binding domain CVS42_RS19330 SM01219 CVS42_RS19330 CVS42_RS19460 SM00671 Sel1-like repeats. CVS42_RS19515 SM01118 CVS42_RS19515 CVS42_RS19520 SM01130 CVS42_RS19520 CVS42_RS19630 SM00487 DEAD-like helicases superfamily CVS42_RS19630 SM00490 helicase superfamily c-terminal domain CVS42_RS19650 SM01266 CVS42_RS19650 CVS42_RS19655 SM00642 Alpha-amylase domain CVS42_RS19665 SM00354 helix_turn _helix lactose operon repressor CVS42_RS19680 SM00870 CVS42_RS19680 CVS42_RS19685 SM01091 Transporter associated domain CVS42_RS19740 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CVS42_RS19750 SM00382 ATPases associated with a variety of cellular activities CVS42_RS19760 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CVS42_RS19760 SM00534 ATPase domain of DNA mismatch repair MUTS family CVS42_RS19840 SM00530 Helix-turn-helix XRE-family like proteins CVS42_RS19870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS19870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS19880 SM00267 diguanylate cyclase CVS42_RS19895 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS19915 SM00357 Cold shock protein domain CVS42_RS19930 SM01120 CVS42_RS19930 CVS42_RS19945 SM00091 PAS domain CVS42_RS19965 SM00014 Acid phosphatase homologues CVS42_RS19975 SM00363 S4 RNA-binding domain CVS42_RS19990 SM00345 helix_turn_helix gluconate operon transcriptional repressor CVS42_RS19990 SM00895 CVS42_RS19990 CVS42_RS20020 SM00267 diguanylate cyclase CVS42_RS20040 SM00267 diguanylate cyclase CVS42_RS20070 SM00876 Biotin and Thiamin Synthesis associated domain CVS42_RS20115 SM00999 Aerolysin toxin CVS42_RS20130 SM00448 cheY-homologous receiver domain CVS42_RS20130 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS20135 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS20145 SM01018 B12 binding domain CVS42_RS20215 SM00886 Stress responsive A/B Barrel Domain CVS42_RS20225 SM00316 Ribosomal protein S1-like RNA-binding domain CVS42_RS20295 SM00382 ATPases associated with a variety of cellular activities CVS42_RS20310 SM00965 Secretin and TonB N terminus short domain CVS42_RS20340 SM00052 Putative diguanylate phosphodiesterase CVS42_RS20340 SM00267 diguanylate cyclase CVS42_RS20345 SM00052 Putative diguanylate phosphodiesterase CVS42_RS20375 SM00345 helix_turn_helix gluconate operon transcriptional repressor CVS42_RS20375 SM00866 CVS42_RS20375 CVS42_RS20380 SM00947 Carbonic anhydrase CVS42_RS20395 SM00382 ATPases associated with a variety of cellular activities CVS42_RS20400 SM00382 ATPases associated with a variety of cellular activities CVS42_RS20400 SM00962 SRP54-type protein, GTPase domain CVS42_RS20400 SM00963 SRP54-type protein, helical bundle domain CVS42_RS20440 SM00822 CVS42_RS20440 CVS42_RS20470 SM00155 Phospholipase D. Active site motifs. CVS42_RS20475 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS20590 SM00838 Elongation factor G C-terminus CVS42_RS20590 SM00889 Elongation factor G, domain IV CVS42_RS20630 SM00663 RNA polymerase I subunit A N-terminus CVS42_RS20655 SM00649 Ribosomal protein L11/L12 CVS42_RS20660 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CVS42_RS20660 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CVS42_RS20715 SM00342 helix_turn_helix, arabinose operon control protein CVS42_RS20730 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CVS42_RS20730 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CVS42_RS20730 SM00493 CVS42_RS20730 CVS42_RS20735 SM00448 cheY-homologous receiver domain CVS42_RS20740 SM00100 Cyclic nucleotide-monophosphate binding domain CVS42_RS20740 SM00387 Histidine kinase-like ATPases CVS42_RS20760 SM00387 Histidine kinase-like ATPases CVS42_RS20765 SM00448 cheY-homologous receiver domain CVS42_RS20765 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS20800 SM00382 ATPases associated with a variety of cellular activities CVS42_RS20800 SM00448 cheY-homologous receiver domain CVS42_RS20810 SM00387 Histidine kinase-like ATPases CVS42_RS20810 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS20830 SM00116 Domain in cystathionine beta-synthase and other proteins. CVS42_RS20840 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS20845 SM00344 helix_turn_helix ASNC type CVS42_RS20855 SM00382 ATPases associated with a variety of cellular activities CVS42_RS20855 SM01086 C-terminal, D2-small domain, of ClpB protein CVS42_RS20865 SM00363 S4 RNA-binding domain CVS42_RS20905 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CVS42_RS20905 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CVS42_RS20915 SM00342 helix_turn_helix, arabinose operon control protein CVS42_RS20925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS20925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS20995 SM00729 Elongator protein 3, MiaB family, Radical SAM CVS42_RS21045 SM01001 AIR carboxylase CVS42_RS21065 SM00257 Lysin motif CVS42_RS21100 SM01230 CVS42_RS21100 CVS42_RS21110 SM00091 PAS domain CVS42_RS21110 SM00387 Histidine kinase-like ATPases CVS42_RS21110 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS21115 SM00382 ATPases associated with a variety of cellular activities CVS42_RS21115 SM00448 cheY-homologous receiver domain CVS42_RS21170 SM00530 Helix-turn-helix XRE-family like proteins CVS42_RS21190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS21190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS21215 SM00671 Sel1-like repeats. CVS42_RS21230 SM00382 ATPases associated with a variety of cellular activities CVS42_RS21265 SM00382 ATPases associated with a variety of cellular activities CVS42_RS21270 SM00563 Phosphate acyltransferases CVS42_RS21275 SM00563 Phosphate acyltransferases CVS42_RS21320 SM00267 diguanylate cyclase CVS42_RS21325 SM00422 helix_turn_helix, mercury resistance CVS42_RS21355 SM00829 Enoylreductase CVS42_RS21400 SM01038 Beta galactosidase small chain CVS42_RS21405 SM00354 helix_turn _helix lactose operon repressor CVS42_RS21450 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CVS42_RS21450 SM00474 3'-5' exonuclease CVS42_RS21450 SM00475 5'-3' exonuclease CVS42_RS21450 SM00482 DNA polymerase A domain CVS42_RS21475 SM00971 Serine acetyltransferase, N-terminal CVS42_RS21485 SM00448 cheY-homologous receiver domain CVS42_RS21485 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS21490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS21490 SM00387 Histidine kinase-like ATPases CVS42_RS21490 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS21520 SM00563 Phosphate acyltransferases CVS42_RS21555 SM00829 Enoylreductase CVS42_RS21590 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CVS42_RS21590 SM01232 CVS42_RS21590 CVS42_RS21660 SM00881 CoA binding domain CVS42_RS21730 SM00448 cheY-homologous receiver domain CVS42_RS21730 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS21735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS21735 SM00387 Histidine kinase-like ATPases CVS42_RS21735 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS21775 SM00836 DALR anticodon binding domain CVS42_RS21785 SM00052 Putative diguanylate phosphodiesterase CVS42_RS21810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CVS42_RS21810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CVS42_RS21830 SM00354 helix_turn _helix lactose operon repressor CVS42_RS21850 SM00382 ATPases associated with a variety of cellular activities CVS42_RS21855 SM00382 ATPases associated with a variety of cellular activities CVS42_RS21860 SM00450 Rhodanese Homology Domain CVS42_RS21880 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CVS42_RS21880 SM00267 diguanylate cyclase CVS42_RS21900 SM00357 Cold shock protein domain CVS42_RS21900 SM00382 ATPases associated with a variety of cellular activities CVS42_RS21900 SM00959 Rho termination factor, N-terminal domain CVS42_RS21910 SM00487 DEAD-like helicases superfamily CVS42_RS21910 SM00490 helicase superfamily c-terminal domain CVS42_RS21930 SM00062 Bacterial periplasmic substrate-binding proteins CVS42_RS21935 SM00052 Putative diguanylate phosphodiesterase CVS42_RS21935 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CVS42_RS21935 SM00091 PAS domain CVS42_RS21935 SM00267 diguanylate cyclase CVS42_RS21945 SM00495 Chitin-binding domain type 3 CVS42_RS21945 SM00636 CVS42_RS21945 CVS42_RS21950 SM00495 Chitin-binding domain type 3 CVS42_RS21955 SM01004 Delta-aminolevulinic acid dehydratase CVS42_RS22065 SM00421 helix_turn_helix, Lux Regulon CVS42_RS22075 SM00420 helix_turn_helix, Deoxyribose operon repressor CVS42_RS22075 SM01134 CVS42_RS22075 CVS42_RS22080 SM00448 cheY-homologous receiver domain CVS42_RS22080 SM00862 Transcriptional regulatory protein, C terminal CVS42_RS22085 SM00387 Histidine kinase-like ATPases CVS42_RS22085 SM00388 His Kinase A (phosphoacceptor) domain CVS42_RS22115 SM00382 ATPases associated with a variety of cellular activities CVS42_RS22155 SM00470 ParB-like nuclease domain CVS42_RS22170 SM01228 CVS42_RS22170 CVS42_RS22185 SM00382 ATPases associated with a variety of cellular activities CVS42_RS22190 SM00382 ATPases associated with a variety of cellular activities