CVS42_RS12525 00d34442bdcf8094a0a21963232a9e15 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 111 2.2E-8 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CVS42_RS12525 00d34442bdcf8094a0a21963232a9e15 120 Gene3D G3DSA:3.10.180.10 2 117 4.0E-19 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS12525 00d34442bdcf8094a0a21963232a9e15 120 SUPERFAMILY SSF54593 6 117 8.53E-24 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS13155 bbef7e70ed245d1e6e9f0c74d12a7a9f 482 Gene3D G3DSA:3.30.2300.10 84 163 7.2E-20 T 29-03-2018 CVS42_RS13155 bbef7e70ed245d1e6e9f0c74d12a7a9f 482 Gene3D G3DSA:3.40.250.10 392 482 1.6E-13 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS13155 bbef7e70ed245d1e6e9f0c74d12a7a9f 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 176 369 3.3E-70 T 29-03-2018 IPR020536 Thil, AANH domain GO:0004810 CVS42_RS13155 bbef7e70ed245d1e6e9f0c74d12a7a9f 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 4.0E-114 T 29-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 CVS42_RS13155 bbef7e70ed245d1e6e9f0c74d12a7a9f 482 Gene3D G3DSA:3.30.70.1510 2 82 6.3E-23 T 29-03-2018 CVS42_RS13155 bbef7e70ed245d1e6e9f0c74d12a7a9f 482 SUPERFAMILY SSF143437 1 173 3.66E-48 T 29-03-2018 CVS42_RS13155 bbef7e70ed245d1e6e9f0c74d12a7a9f 482 Pfam PF02926 THUMP domain 28 161 7.9E-24 T 29-03-2018 IPR004114 THUMP domain GO:0003723 CVS42_RS13155 bbef7e70ed245d1e6e9f0c74d12a7a9f 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 219.425 T 29-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 CVS42_RS13155 bbef7e70ed245d1e6e9f0c74d12a7a9f 482 Gene3D G3DSA:3.40.50.620 175 391 1.6E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS13155 bbef7e70ed245d1e6e9f0c74d12a7a9f 482 SUPERFAMILY SSF52402 176 372 3.96E-41 T 29-03-2018 CVS42_RS13155 bbef7e70ed245d1e6e9f0c74d12a7a9f 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 383 482 5.4E-40 T 29-03-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 CVS42_RS13155 bbef7e70ed245d1e6e9f0c74d12a7a9f 482 SMART SM00981 75 165 2.5E-26 T 29-03-2018 IPR004114 THUMP domain GO:0003723 CVS42_RS13155 bbef7e70ed245d1e6e9f0c74d12a7a9f 482 SUPERFAMILY SSF52821 395 481 7.73E-13 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS09870 79edfd05daff484d31161280f21e4b4c 637 SMART SM00382 344 515 1.0E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS09870 79edfd05daff484d31161280f21e4b4c 637 SMART SM00382 28 230 1.8E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS09870 79edfd05daff484d31161280f21e4b4c 637 Gene3D G3DSA:3.40.50.300 81 291 7.7E-43 T 29-03-2018 CVS42_RS09870 79edfd05daff484d31161280f21e4b4c 637 Gene3D G3DSA:3.40.50.300 9 80 8.6E-9 T 29-03-2018 CVS42_RS09870 79edfd05daff484d31161280f21e4b4c 637 Pfam PF12848 ABC transporter 224 299 3.0E-10 T 29-03-2018 IPR032781 ABC-transporter extension domain CVS42_RS09870 79edfd05daff484d31161280f21e4b4c 637 SUPERFAMILY SSF52540 11 238 4.87E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09870 79edfd05daff484d31161280f21e4b4c 637 Pfam PF00005 ABC transporter 336 469 5.5E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS09870 79edfd05daff484d31161280f21e4b4c 637 Pfam PF00005 ABC transporter 19 185 1.1E-23 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS09870 79edfd05daff484d31161280f21e4b4c 637 SUPERFAMILY SSF52540 311 517 1.08E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09870 79edfd05daff484d31161280f21e4b4c 637 Pfam PF16326 ABC transporter C-terminal domain 563 631 7.8E-19 T 29-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CVS42_RS09870 79edfd05daff484d31161280f21e4b4c 637 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS09870 79edfd05daff484d31161280f21e4b4c 637 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS09870 79edfd05daff484d31161280f21e4b4c 637 Gene3D G3DSA:3.40.50.300 292 547 9.2E-57 T 29-03-2018 CVS42_RS08455 b79877e49eaf66af891ddc2094482900 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.8E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS08455 b79877e49eaf66af891ddc2094482900 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS08455 b79877e49eaf66af891ddc2094482900 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS08455 b79877e49eaf66af891ddc2094482900 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS08455 b79877e49eaf66af891ddc2094482900 287 SUPERFAMILY SSF46785 1 84 6.39E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08455 b79877e49eaf66af891ddc2094482900 287 SUPERFAMILY SSF53850 90 286 2.27E-30 T 29-03-2018 CVS42_RS08455 b79877e49eaf66af891ddc2094482900 287 Pfam PF03466 LysR substrate binding domain 88 283 6.6E-30 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS08455 b79877e49eaf66af891ddc2094482900 287 Gene3D G3DSA:3.40.190.10 174 259 4.7E-11 T 29-03-2018 CVS42_RS08455 b79877e49eaf66af891ddc2094482900 287 Gene3D G3DSA:3.40.190.10 89 173 3.9E-14 T 29-03-2018 CVS42_RS08455 b79877e49eaf66af891ddc2094482900 287 Gene3D G3DSA:1.10.10.10 1 88 3.4E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20905 db2b02539f6a4a3b25edf030ad960b0c 508 Gene3D G3DSA:3.40.50.720 1 192 1.9E-51 T 29-03-2018 CVS42_RS20905 db2b02539f6a4a3b25edf030ad960b0c 508 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 424 507 1.0E-36 T 29-03-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CVS42_RS20905 db2b02539f6a4a3b25edf030ad960b0c 508 SUPERFAMILY SSF51735 136 315 3.95E-38 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS20905 db2b02539f6a4a3b25edf030ad960b0c 508 Gene3D G3DSA:3.40.50.720 194 376 3.8E-56 T 29-03-2018 CVS42_RS20905 db2b02539f6a4a3b25edf030ad960b0c 508 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 29-03-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 CVS42_RS20905 db2b02539f6a4a3b25edf030ad960b0c 508 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 134 1.7E-49 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CVS42_RS20905 db2b02539f6a4a3b25edf030ad960b0c 508 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 168 193 - T 29-03-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 Reactome: R-HSA-71403 CVS42_RS20905 db2b02539f6a4a3b25edf030ad960b0c 508 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 139 367 2.8E-75 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CVS42_RS20905 db2b02539f6a4a3b25edf030ad960b0c 508 SUPERFAMILY SSF52283 1 166 7.91E-55 T 29-03-2018 CVS42_RS20905 db2b02539f6a4a3b25edf030ad960b0c 508 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 507 9.8E-275 T 29-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CVS42_RS20905 db2b02539f6a4a3b25edf030ad960b0c 508 SMART SM01003 4 135 4.2E-75 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CVS42_RS20905 db2b02539f6a4a3b25edf030ad960b0c 508 SMART SM01002 144 310 4.0E-84 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CVS42_RS20905 db2b02539f6a4a3b25edf030ad960b0c 508 PIRSF PIRSF000203 1 507 6.6E-267 T 29-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CVS42_RS16750 b4d3723e80c7e1da796e7276a59bb72a 408 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 65 70 - T 29-03-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 CVS42_RS16750 b4d3723e80c7e1da796e7276a59bb72a 408 Gene3D G3DSA:2.40.10.10 59 127 2.0E-16 T 29-03-2018 CVS42_RS16750 b4d3723e80c7e1da796e7276a59bb72a 408 SMART SM00020 26 252 2.6E-33 T 29-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 CVS42_RS16750 b4d3723e80c7e1da796e7276a59bb72a 408 Gene3D G3DSA:2.40.10.10 128 255 2.7E-21 T 29-03-2018 CVS42_RS16750 b4d3723e80c7e1da796e7276a59bb72a 408 Pfam PF00089 Trypsin 27 252 5.7E-34 T 29-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 CVS42_RS16750 b4d3723e80c7e1da796e7276a59bb72a 408 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 387 408 7.7E-4 T 29-03-2018 IPR020008 GlyGly-CTERM domain CVS42_RS16750 b4d3723e80c7e1da796e7276a59bb72a 408 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 207 218 - T 29-03-2018 IPR033116 Serine proteases, trypsin family, serine active site CVS42_RS16750 b4d3723e80c7e1da796e7276a59bb72a 408 SUPERFAMILY SSF50494 25 255 6.28E-46 T 29-03-2018 IPR009003 Peptidase S1, PA clan CVS42_RS16750 b4d3723e80c7e1da796e7276a59bb72a 408 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 55 70 3.3E-16 T 29-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 CVS42_RS16750 b4d3723e80c7e1da796e7276a59bb72a 408 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 120 134 3.3E-16 T 29-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 CVS42_RS16750 b4d3723e80c7e1da796e7276a59bb72a 408 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 206 218 3.3E-16 T 29-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 CVS42_RS16750 b4d3723e80c7e1da796e7276a59bb72a 408 Gene3D G3DSA:2.40.10.10 27 58 2.0E-11 T 29-03-2018 CVS42_RS16750 b4d3723e80c7e1da796e7276a59bb72a 408 Gene3D G3DSA:2.60.40.10 256 353 0.0015 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS15985 14996d71cd7d921482c68688d080490e 316 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 316 51.004 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CVS42_RS15985 14996d71cd7d921482c68688d080490e 316 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 148 8.2E-66 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CVS42_RS15985 14996d71cd7d921482c68688d080490e 316 Gene3D G3DSA:3.90.226.10 40 309 9.7E-69 T 29-03-2018 CVS42_RS15985 14996d71cd7d921482c68688d080490e 316 Gene3D G3DSA:1.20.5.1000 6 39 5.7E-4 T 29-03-2018 CVS42_RS15985 14996d71cd7d921482c68688d080490e 316 SUPERFAMILY SSF52096 4 315 1.44E-106 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS15985 14996d71cd7d921482c68688d080490e 316 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 3 316 5.4E-167 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CVS42_RS15985 14996d71cd7d921482c68688d080490e 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 2.8E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CVS42_RS15985 14996d71cd7d921482c68688d080490e 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 2.8E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CVS42_RS15985 14996d71cd7d921482c68688d080490e 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 2.8E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CVS42_RS15985 14996d71cd7d921482c68688d080490e 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 2.8E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CVS42_RS15985 14996d71cd7d921482c68688d080490e 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 2.8E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CVS42_RS15985 14996d71cd7d921482c68688d080490e 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 2.8E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CVS42_RS17420 a9ff11d863fd0357a5c146a0b0b0e76c 720 SUPERFAMILY SSF75138 233 354 1.44E-26 T 29-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CVS42_RS17420 a9ff11d863fd0357a5c146a0b0b0e76c 720 SUPERFAMILY SSF53659 396 714 5.35E-96 T 29-03-2018 CVS42_RS17420 a9ff11d863fd0357a5c146a0b0b0e76c 720 SUPERFAMILY SSF52540 3 243 1.08E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS17420 a9ff11d863fd0357a5c146a0b0b0e76c 720 Pfam PF07085 DRTGG domain 237 348 1.9E-30 T 29-03-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CVS42_RS17420 a9ff11d863fd0357a5c146a0b0b0e76c 720 Pfam PF13500 AAA domain 3 234 2.8E-43 T 29-03-2018 CVS42_RS17420 a9ff11d863fd0357a5c146a0b0b0e76c 720 Gene3D G3DSA:3.40.50.300 1 233 2.2E-29 T 29-03-2018 CVS42_RS17420 a9ff11d863fd0357a5c146a0b0b0e76c 720 Pfam PF01515 Phosphate acetyl/butaryl transferase 395 709 4.9E-127 T 29-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CVS42_RS17420 a9ff11d863fd0357a5c146a0b0b0e76c 720 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 410 709 6.4E-135 T 29-03-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CVS42_RS17420 a9ff11d863fd0357a5c146a0b0b0e76c 720 Gene3D G3DSA:3.40.718.10 412 693 6.1E-66 T 29-03-2018 CVS42_RS17420 a9ff11d863fd0357a5c146a0b0b0e76c 720 Gene3D G3DSA:3.40.1390.20 234 370 2.4E-29 T 29-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CVS42_RS17420 a9ff11d863fd0357a5c146a0b0b0e76c 720 PIRSF PIRSF006107 1 718 0.0 T 29-03-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CVS42_RS20490 9ef720b6d1fb9bb33560018acd88bf0c 328 Gene3D G3DSA:3.40.190.10 193 281 1.3E-13 T 29-03-2018 CVS42_RS20490 9ef720b6d1fb9bb33560018acd88bf0c 328 Pfam PF03466 LysR substrate binding domain 98 307 9.9E-20 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS20490 9ef720b6d1fb9bb33560018acd88bf0c 328 Gene3D G3DSA:3.40.190.10 97 192 1.4E-9 T 29-03-2018 CVS42_RS20490 9ef720b6d1fb9bb33560018acd88bf0c 328 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 9.8E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS20490 9ef720b6d1fb9bb33560018acd88bf0c 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 3.3E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS20490 9ef720b6d1fb9bb33560018acd88bf0c 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 3.3E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS20490 9ef720b6d1fb9bb33560018acd88bf0c 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 3.3E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS20490 9ef720b6d1fb9bb33560018acd88bf0c 328 Gene3D G3DSA:1.10.10.10 2 89 1.4E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20490 9ef720b6d1fb9bb33560018acd88bf0c 328 SUPERFAMILY SSF46785 8 88 4.08E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20490 9ef720b6d1fb9bb33560018acd88bf0c 328 SUPERFAMILY SSF53850 92 308 1.99E-39 T 29-03-2018 CVS42_RS06735 dd1c207d5120f2d5c1942b47f9f76390 341 Gene3D G3DSA:3.40.630.10 49 317 5.9E-28 T 29-03-2018 CVS42_RS06735 dd1c207d5120f2d5c1942b47f9f76390 341 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 6 335 6.0E-105 T 29-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CVS42_RS06735 dd1c207d5120f2d5c1942b47f9f76390 341 SUPERFAMILY SSF53187 5 336 1.52E-81 T 29-03-2018 CVS42_RS06735 dd1c207d5120f2d5c1942b47f9f76390 341 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 341 152.431 T 29-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CVS42_RS06735 dd1c207d5120f2d5c1942b47f9f76390 341 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 55 337 1.6E-56 T 29-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 CVS42_RS06735 dd1c207d5120f2d5c1942b47f9f76390 341 PIRSF PIRSF017020 1 340 2.6E-127 T 29-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CVS42_RS16005 e886196f6567f86570e984cd257c91dc 263 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 9.3E-28 T 29-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CVS42_RS16005 e886196f6567f86570e984cd257c91dc 263 Gene3D G3DSA:1.20.1180.10 197 263 8.4E-23 T 29-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CVS42_RS16005 e886196f6567f86570e984cd257c91dc 263 SUPERFAMILY SSF51161 2 262 3.87E-83 T 29-03-2018 IPR011004 Trimeric LpxA-like CVS42_RS16005 e886196f6567f86570e984cd257c91dc 263 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 45.28 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CVS42_RS16005 e886196f6567f86570e984cd257c91dc 263 PIRSF PIRSF000456 4 263 7.2E-104 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CVS42_RS16005 e886196f6567f86570e984cd257c91dc 263 Gene3D G3DSA:2.160.10.10 1 196 5.2E-50 T 29-03-2018 CVS42_RS16005 e886196f6567f86570e984cd257c91dc 263 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.0E-100 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CVS42_RS16005 e886196f6567f86570e984cd257c91dc 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 65 99 2.5E-4 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS16005 e886196f6567f86570e984cd257c91dc 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 36 62 5.3E-6 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS16005 e886196f6567f86570e984cd257c91dc 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 4 33 2.6E-4 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS16005 e886196f6567f86570e984cd257c91dc 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 3.3E-8 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS06740 b4b2b20b41f436c5b225e30d64646dca 517 Gene3D G3DSA:3.10.350.10 463 517 1.7E-13 T 29-03-2018 CVS42_RS06740 b4b2b20b41f436c5b225e30d64646dca 517 Gene3D G3DSA:3.10.350.10 406 461 6.9E-16 T 29-03-2018 CVS42_RS06740 b4b2b20b41f436c5b225e30d64646dca 517 SUPERFAMILY SSF53955 106 257 1.05E-41 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS06740 b4b2b20b41f436c5b225e30d64646dca 517 SMART SM00257 339 382 9.3E-15 T 29-03-2018 IPR018392 LysM domain CVS42_RS06740 b4b2b20b41f436c5b225e30d64646dca 517 SMART SM00257 468 512 1.3E-9 T 29-03-2018 IPR018392 LysM domain CVS42_RS06740 b4b2b20b41f436c5b225e30d64646dca 517 SMART SM00257 412 456 3.0E-12 T 29-03-2018 IPR018392 LysM domain CVS42_RS06740 b4b2b20b41f436c5b225e30d64646dca 517 Gene3D G3DSA:1.10.530.10 36 253 2.0E-34 T 29-03-2018 CVS42_RS06740 b4b2b20b41f436c5b225e30d64646dca 517 Pfam PF01464 Transglycosylase SLT domain 121 220 1.5E-25 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CVS42_RS06740 b4b2b20b41f436c5b225e30d64646dca 517 Gene3D G3DSA:3.10.350.10 335 398 2.4E-15 T 29-03-2018 CVS42_RS06740 b4b2b20b41f436c5b225e30d64646dca 517 SUPERFAMILY SSF54106 411 456 1.1E-10 T 29-03-2018 IPR018392 LysM domain CVS42_RS06740 b4b2b20b41f436c5b225e30d64646dca 517 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 128 156 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CVS42_RS06740 b4b2b20b41f436c5b225e30d64646dca 517 SUPERFAMILY SSF54106 339 382 4.97E-11 T 29-03-2018 IPR018392 LysM domain CVS42_RS06740 b4b2b20b41f436c5b225e30d64646dca 517 Pfam PF01476 LysM domain 340 382 3.5E-13 T 29-03-2018 IPR018392 LysM domain CVS42_RS06740 b4b2b20b41f436c5b225e30d64646dca 517 Pfam PF01476 LysM domain 469 511 6.8E-11 T 29-03-2018 IPR018392 LysM domain CVS42_RS06740 b4b2b20b41f436c5b225e30d64646dca 517 Pfam PF01476 LysM domain 413 455 1.1E-11 T 29-03-2018 IPR018392 LysM domain CVS42_RS06740 b4b2b20b41f436c5b225e30d64646dca 517 SUPERFAMILY SSF54106 467 511 1.31E-9 T 29-03-2018 IPR018392 LysM domain CVS42_RS07665 4226e9da685cee1079b3a9259674640c 367 SUPERFAMILY SSF102114 102 306 1.83E-14 T 29-03-2018 CVS42_RS07665 4226e9da685cee1079b3a9259674640c 367 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 352 2.4E-164 T 29-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CVS42_RS07665 4226e9da685cee1079b3a9259674640c 367 Pfam PF04055 Radical SAM superfamily 108 275 2.0E-18 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS07665 4226e9da685cee1079b3a9259674640c 367 PIRSF PIRSF006004 3 360 7.8E-146 T 29-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CVS42_RS07665 4226e9da685cee1079b3a9259674640c 367 Gene3D G3DSA:3.20.20.70 14 364 1.1E-42 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS07665 4226e9da685cee1079b3a9259674640c 367 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 347 74.091 T 29-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CVS42_RS10695 01d0056a48e6e493200d79eaf06b723b 348 Gene3D G3DSA:3.30.70.20 53 127 4.3E-15 T 29-03-2018 CVS42_RS10695 01d0056a48e6e493200d79eaf06b723b 348 Pfam PF13247 4Fe-4S dicluster domain 107 208 1.6E-23 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS10695 01d0056a48e6e493200d79eaf06b723b 348 SUPERFAMILY SSF54862 39 324 1.0E-67 T 29-03-2018 CVS42_RS10695 01d0056a48e6e493200d79eaf06b723b 348 Gene3D G3DSA:3.30.70.20 25 52 0.012 T 29-03-2018 CVS42_RS10695 01d0056a48e6e493200d79eaf06b723b 348 Gene3D G3DSA:3.30.70.20 128 169 5.7E-17 T 29-03-2018 CVS42_RS10695 01d0056a48e6e493200d79eaf06b723b 348 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 1 27 2.5E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CVS42_RS10695 01d0056a48e6e493200d79eaf06b723b 348 Gene3D G3DSA:3.30.70.20 170 302 9.2E-18 T 29-03-2018 CVS42_RS10695 01d0056a48e6e493200d79eaf06b723b 348 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS17330 d0e39d59fc1f9e34df68e1722ede75a0 658 SMART SM00283 394 655 1.5E-68 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS17330 d0e39d59fc1f9e34df68e1722ede75a0 658 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 441 622 1.5E-41 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS17330 d0e39d59fc1f9e34df68e1722ede75a0 658 Pfam PF00672 HAMP domain 326 376 3.7E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS17330 d0e39d59fc1f9e34df68e1722ede75a0 658 SMART SM00304 326 379 3.6E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS17330 d0e39d59fc1f9e34df68e1722ede75a0 658 Gene3D G3DSA:1.10.287.950 431 658 2.9E-50 T 29-03-2018 CVS42_RS17330 d0e39d59fc1f9e34df68e1722ede75a0 658 Gene3D G3DSA:1.10.287.950 198 430 2.5E-10 T 29-03-2018 CVS42_RS17330 d0e39d59fc1f9e34df68e1722ede75a0 658 SUPERFAMILY SSF58104 352 656 6.15E-68 T 29-03-2018 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 3 803 106.794 T 29-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 Gene3D G3DSA:3.30.565.10 2 224 3.7E-75 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR00418 DNA topoisomerase II family signature 114 128 9.6E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR00418 DNA topoisomerase II family signature 420 434 9.6E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR00418 DNA topoisomerase II family signature 71 84 9.6E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR00418 DNA topoisomerase II family signature 505 522 9.6E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR00418 DNA topoisomerase II family signature 735 751 9.6E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR00418 DNA topoisomerase II family signature 36 51 9.6E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR00418 DNA topoisomerase II family signature 487 503 9.6E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR00418 DNA topoisomerase II family signature 525 537 9.6E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR00418 DNA topoisomerase II family signature 268 281 9.6E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 6 803 0.0 T 29-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 SMART SM00387 32 176 3.7E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 Gene3D G3DSA:3.40.50.670 400 800 4.9E-108 T 29-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 731 792 5.8E-30 T 29-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 174 5.0E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR01159 DNA gyrase subunit B signature 756 768 1.4E-79 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR01159 DNA gyrase subunit B signature 470 479 1.4E-79 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR01159 DNA gyrase subunit B signature 181 196 1.4E-79 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR01159 DNA gyrase subunit B signature 6 16 1.4E-79 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR01159 DNA gyrase subunit B signature 360 374 1.4E-79 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR01159 DNA gyrase subunit B signature 374 394 1.4E-79 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR01159 DNA gyrase subunit B signature 312 328 1.4E-79 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR01159 DNA gyrase subunit B signature 196 209 1.4E-79 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.4E-79 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 PRINTS PR01159 DNA gyrase subunit B signature 772 788 1.4E-79 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 SUPERFAMILY SSF54211 221 391 8.54E-61 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 Gene3D G3DSA:3.30.230.10 225 392 1.1E-65 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 SMART SM00433 36 796 1.3E-279 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 Pfam PF01751 Toprim domain 419 531 1.8E-18 T 29-03-2018 IPR006171 TOPRIM domain CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 29-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 Pfam PF00204 DNA gyrase B 221 390 1.2E-59 T 29-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 SUPERFAMILY SSF55874 6 218 8.66E-76 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 SUPERFAMILY SSF56719 394 560 3.4E-86 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CVS42_RS00065 29ed477e5d415f58d5da943ba9d6fa67 803 SUPERFAMILY SSF56719 729 794 3.4E-86 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CVS42_RS10615 9a0279a15051c0b8e52aa8e022919ed0 629 Gene3D G3DSA:2.40.30.10 182 298 1.6E-19 T 29-03-2018 CVS42_RS10615 9a0279a15051c0b8e52aa8e022919ed0 629 SUPERFAMILY SSF50447 182 266 2.95E-19 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CVS42_RS10615 9a0279a15051c0b8e52aa8e022919ed0 629 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 161 1.1E-17 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CVS42_RS10615 9a0279a15051c0b8e52aa8e022919ed0 629 Pfam PF09107 Elongation factor SelB, winged helix 576 613 3.2E-7 T 29-03-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CVS42_RS10615 9a0279a15051c0b8e52aa8e022919ed0 629 Pfam PF03144 Elongation factor Tu domain 2 198 264 1.8E-7 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CVS42_RS10615 9a0279a15051c0b8e52aa8e022919ed0 629 Gene3D G3DSA:1.10.10.10 358 469 6.1E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS10615 9a0279a15051c0b8e52aa8e022919ed0 629 Gene3D G3DSA:1.10.10.10 531 614 3.3E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS10615 9a0279a15051c0b8e52aa8e022919ed0 629 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 7 363 1.2E-75 T 29-03-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CVS42_RS10615 9a0279a15051c0b8e52aa8e022919ed0 629 Pfam PF00009 Elongation factor Tu GTP binding domain 8 169 1.2E-27 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS10615 9a0279a15051c0b8e52aa8e022919ed0 629 SUPERFAMILY SSF52540 6 169 1.7E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS10615 9a0279a15051c0b8e52aa8e022919ed0 629 SUPERFAMILY SSF46785 572 613 1.31E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS10615 9a0279a15051c0b8e52aa8e022919ed0 629 Gene3D G3DSA:3.40.50.300 1 181 7.3E-32 T 29-03-2018 CVS42_RS10615 9a0279a15051c0b8e52aa8e022919ed0 629 SUPERFAMILY SSF46785 419 467 6.56E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS22080 b4c13ef68c6b7e1628a00422ca0b3fd2 224 SMART SM00448 4 114 3.8E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS22080 b4c13ef68c6b7e1628a00422ca0b3fd2 224 Gene3D G3DSA:3.40.50.2300 1 124 9.8E-29 T 29-03-2018 CVS42_RS22080 b4c13ef68c6b7e1628a00422ca0b3fd2 224 SMART SM00862 145 221 3.6E-26 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS22080 b4c13ef68c6b7e1628a00422ca0b3fd2 224 SUPERFAMILY SSF46894 132 222 1.73E-24 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS22080 b4c13ef68c6b7e1628a00422ca0b3fd2 224 Gene3D G3DSA:1.10.10.10 125 224 8.0E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS22080 b4c13ef68c6b7e1628a00422ca0b3fd2 224 SUPERFAMILY SSF52172 2 130 4.98E-35 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS22080 b4c13ef68c6b7e1628a00422ca0b3fd2 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 221 4.4E-24 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS22080 b4c13ef68c6b7e1628a00422ca0b3fd2 224 Pfam PF00072 Response regulator receiver domain 6 114 3.9E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS08985 a348d0ea27c88e60ab5fe69ac2dd869a 237 Pfam PF07840 FadR C-terminal domain 72 234 1.3E-72 T 29-03-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 CVS42_RS08985 a348d0ea27c88e60ab5fe69ac2dd869a 237 SUPERFAMILY SSF48008 79 230 3.01E-59 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CVS42_RS08985 a348d0ea27c88e60ab5fe69ac2dd869a 237 SMART SM00345 12 71 1.0E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS08985 a348d0ea27c88e60ab5fe69ac2dd869a 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS08985 a348d0ea27c88e60ab5fe69ac2dd869a 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS08985 a348d0ea27c88e60ab5fe69ac2dd869a 237 Gene3D G3DSA:1.10.10.10 1 79 7.8E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08985 a348d0ea27c88e60ab5fe69ac2dd869a 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.2E-20 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS08985 a348d0ea27c88e60ab5fe69ac2dd869a 237 Gene3D G3DSA:1.20.120.530 80 237 4.3E-21 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CVS42_RS08985 a348d0ea27c88e60ab5fe69ac2dd869a 237 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 237 160.643 T 29-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 CVS42_RS08985 a348d0ea27c88e60ab5fe69ac2dd869a 237 SUPERFAMILY SSF46785 11 75 2.73E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08985 a348d0ea27c88e60ab5fe69ac2dd869a 237 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 5.4E-119 T 29-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 CVS42_RS11690 4a77d6b5ebc0f38bf3feb3fa46f844ec 202 Gene3D G3DSA:2.50.20.10 18 202 3.1E-37 T 29-03-2018 CVS42_RS11690 4a77d6b5ebc0f38bf3feb3fa46f844ec 202 SUPERFAMILY SSF89392 21 202 3.65E-50 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CVS42_RS11690 4a77d6b5ebc0f38bf3feb3fa46f844ec 202 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 2 202 1.4E-60 T 29-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CVS42_RS11690 4a77d6b5ebc0f38bf3feb3fa46f844ec 202 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 9 201 29.755 T 29-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CVS42_RS11690 4a77d6b5ebc0f38bf3feb3fa46f844ec 202 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 191 1.5E-47 T 29-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CVS42_RS16375 84e296b415b44a15c2aaa250411aeaf3 278 SUPERFAMILY SSF52402 19 108 3.75E-11 T 29-03-2018 CVS42_RS16375 84e296b415b44a15c2aaa250411aeaf3 278 Gene3D G3DSA:3.40.50.620 10 241 2.5E-11 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS20090 ca39925a32f09337def7c32fa168fc64 536 Pfam PF08543 Phosphomethylpyrimidine kinase 31 276 4.7E-72 T 29-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CVS42_RS20090 ca39925a32f09337def7c32fa168fc64 536 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 25 278 6.2E-74 T 29-03-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CVS42_RS20090 ca39925a32f09337def7c32fa168fc64 536 SUPERFAMILY SSF51391 316 515 4.32E-62 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CVS42_RS20090 ca39925a32f09337def7c32fa168fc64 536 Gene3D G3DSA:3.20.20.70 312 518 6.5E-38 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS20090 ca39925a32f09337def7c32fa168fc64 536 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 302 518 19.547 T 29-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CVS42_RS20090 ca39925a32f09337def7c32fa168fc64 536 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 331 513 1.0E-47 T 29-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CVS42_RS20090 ca39925a32f09337def7c32fa168fc64 536 Gene3D G3DSA:3.40.1190.20 18 301 3.1E-52 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS20090 ca39925a32f09337def7c32fa168fc64 536 Pfam PF02581 Thiamine monophosphate synthase 331 500 1.2E-52 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CVS42_RS20090 ca39925a32f09337def7c32fa168fc64 536 SUPERFAMILY SSF53613 21 281 2.81E-66 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS01155 e5dd3bc0bb48c86be5ca1dce5f282660 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 1.2E-44 T 29-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01155 e5dd3bc0bb48c86be5ca1dce5f282660 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 5.9E-42 T 29-03-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01155 e5dd3bc0bb48c86be5ca1dce5f282660 117 SUPERFAMILY SSF53137 3 115 5.45E-50 T 29-03-2018 CVS42_RS01155 e5dd3bc0bb48c86be5ca1dce5f282660 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.187 T 29-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01155 e5dd3bc0bb48c86be5ca1dce5f282660 117 Gene3D G3DSA:3.30.420.100 1 117 7.2E-37 T 29-03-2018 CVS42_RS17770 29018d0f0c5454d41df1c9598221b225 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 3.1E-254 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CVS42_RS17770 29018d0f0c5454d41df1c9598221b225 530 PIRSF PIRSF000414 1 530 4.9E-225 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CVS42_RS17770 29018d0f0c5454d41df1c9598221b225 530 Gene3D G3DSA:3.40.50.1380 1 196 3.5E-78 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CVS42_RS17770 29018d0f0c5454d41df1c9598221b225 530 Pfam PF02142 MGS-like domain 19 132 3.6E-30 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CVS42_RS17770 29018d0f0c5454d41df1c9598221b225 530 SMART SM00851 19 132 1.9E-62 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CVS42_RS17770 29018d0f0c5454d41df1c9598221b225 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.152 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CVS42_RS17770 29018d0f0c5454d41df1c9598221b225 530 Gene3D G3DSA:3.40.140.20 228 375 2.0E-52 T 29-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CVS42_RS17770 29018d0f0c5454d41df1c9598221b225 530 SMART SM00798 137 462 3.6E-215 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CVS42_RS17770 29018d0f0c5454d41df1c9598221b225 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 5.8E-117 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CVS42_RS17770 29018d0f0c5454d41df1c9598221b225 530 SUPERFAMILY SSF52335 7 197 3.4E-71 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CVS42_RS17770 29018d0f0c5454d41df1c9598221b225 530 Gene3D G3DSA:3.40.140.20 376 520 1.5E-53 T 29-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CVS42_RS17770 29018d0f0c5454d41df1c9598221b225 530 SUPERFAMILY SSF53927 222 530 3.41E-129 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CVS42_RS21810 197ae8f84e7a802244608479725dd594 754 SUPERFAMILY SSF58104 323 631 2.22E-77 T 29-03-2018 CVS42_RS21810 197ae8f84e7a802244608479725dd594 754 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 415 598 1.9E-44 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS21810 197ae8f84e7a802244608479725dd594 754 Gene3D G3DSA:1.10.287.950 415 633 2.2E-49 T 29-03-2018 CVS42_RS21810 197ae8f84e7a802244608479725dd594 754 SMART SM00304 301 355 9.8E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS21810 197ae8f84e7a802244608479725dd594 754 Pfam PF14827 Double sensory domain of two-component sensor kinase 41 266 2.0E-34 T 29-03-2018 IPR029150 Double Cache domain 3 CVS42_RS21810 197ae8f84e7a802244608479725dd594 754 Pfam PF13682 Chemoreceptor zinc-binding domain 647 713 3.2E-11 T 29-03-2018 IPR025991 Chemoreceptor zinc-binding domain CVS42_RS21810 197ae8f84e7a802244608479725dd594 754 Gene3D G3DSA:1.10.287.1060 331 414 6.3E-8 T 29-03-2018 CVS42_RS21810 197ae8f84e7a802244608479725dd594 754 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 497 526 7.0E-5 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS21810 197ae8f84e7a802244608479725dd594 754 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 276 296 7.0E-5 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS21810 197ae8f84e7a802244608479725dd594 754 Gene3D G3DSA:3.30.450.20 40 184 3.2E-9 T 29-03-2018 CVS42_RS21810 197ae8f84e7a802244608479725dd594 754 Gene3D G3DSA:3.30.450.20 193 279 0.0044 T 29-03-2018 CVS42_RS21810 197ae8f84e7a802244608479725dd594 754 SMART SM00283 370 631 1.7E-78 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS21810 197ae8f84e7a802244608479725dd594 754 SUPERFAMILY SSF103190 55 184 5.49E-12 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CVS42_RS15660 ee683504a9457802637b8937fbbf269b 388 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 184 380 1.1E-46 T 29-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 CVS42_RS15660 ee683504a9457802637b8937fbbf269b 388 Gene3D G3DSA:3.30.1400.10 251 383 1.6E-47 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CVS42_RS15660 ee683504a9457802637b8937fbbf269b 388 SUPERFAMILY SSF64383 251 385 1.44E-45 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CVS42_RS15660 ee683504a9457802637b8937fbbf269b 388 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 253 378 6.8E-48 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CVS42_RS15660 ee683504a9457802637b8937fbbf269b 388 SMART SM00771 250 380 5.4E-52 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CVS42_RS15660 ee683504a9457802637b8937fbbf269b 388 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 382 22.194 T 29-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 CVS42_RS15660 ee683504a9457802637b8937fbbf269b 388 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 253 342 1.0E-24 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CVS42_RS05275 7a85cf482a389c3100c3af35ef80b768 587 SUPERFAMILY SSF63882 188 354 2.49E-47 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CVS42_RS05275 7a85cf482a389c3100c3af35ef80b768 587 Pfam PF00994 Probable molybdopterin binding domain 363 497 2.3E-25 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS05275 7a85cf482a389c3100c3af35ef80b768 587 Gene3D G3DSA:2.40.340.10 508 580 1.5E-20 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CVS42_RS05275 7a85cf482a389c3100c3af35ef80b768 587 Pfam PF03454 MoeA C-terminal region (domain IV) 513 581 2.1E-18 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CVS42_RS05275 7a85cf482a389c3100c3af35ef80b768 587 Gene3D G3DSA:3.40.50.300 4 179 2.5E-28 T 29-03-2018 CVS42_RS05275 7a85cf482a389c3100c3af35ef80b768 587 Gene3D G3DSA:2.170.190.11 243 322 8.5E-25 T 29-03-2018 CVS42_RS05275 7a85cf482a389c3100c3af35ef80b768 587 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 10 173 1.1E-42 T 29-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CVS42_RS05275 7a85cf482a389c3100c3af35ef80b768 587 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 434 467 - T 29-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CVS42_RS05275 7a85cf482a389c3100c3af35ef80b768 587 SMART SM00852 361 498 4.1E-42 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS05275 7a85cf482a389c3100c3af35ef80b768 587 SUPERFAMILY SSF63867 506 585 3.27E-23 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CVS42_RS05275 7a85cf482a389c3100c3af35ef80b768 587 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 358 494 3.8E-32 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS05275 7a85cf482a389c3100c3af35ef80b768 587 SUPERFAMILY SSF52540 8 174 1.33E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS05275 7a85cf482a389c3100c3af35ef80b768 587 Pfam PF03453 MoeA N-terminal region (domain I and II) 190 348 6.8E-39 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CVS42_RS05275 7a85cf482a389c3100c3af35ef80b768 587 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 10 142 9.3E-50 T 29-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CVS42_RS05275 7a85cf482a389c3100c3af35ef80b768 587 SUPERFAMILY SSF53218 358 501 1.83E-43 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS05275 7a85cf482a389c3100c3af35ef80b768 587 Gene3D G3DSA:3.40.980.10 331 504 1.0E-52 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS05275 7a85cf482a389c3100c3af35ef80b768 587 Gene3D G3DSA:3.90.105.10 210 242 2.7E-6 T 29-03-2018 CVS42_RS06710 5d4449f6f38528c589af50393ca1ebb0 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 165 238 8.0E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS06710 5d4449f6f38528c589af50393ca1ebb0 242 SUPERFAMILY SSF52172 12 140 5.69E-41 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS06710 5d4449f6f38528c589af50393ca1ebb0 242 SUPERFAMILY SSF46894 138 238 1.39E-21 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS06710 5d4449f6f38528c589af50393ca1ebb0 242 Gene3D G3DSA:3.40.50.2300 14 136 1.6E-36 T 29-03-2018 CVS42_RS06710 5d4449f6f38528c589af50393ca1ebb0 242 SMART SM00862 164 238 6.3E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS06710 5d4449f6f38528c589af50393ca1ebb0 242 Gene3D G3DSA:1.10.10.10 137 242 2.9E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS06710 5d4449f6f38528c589af50393ca1ebb0 242 SMART SM00448 14 124 2.6E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06710 5d4449f6f38528c589af50393ca1ebb0 242 Pfam PF00072 Response regulator receiver domain 16 124 2.6E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS05595 1bc5505c7cb10455a560c825c8624065 128 Pfam PF10975 Protein of unknown function (DUF2802) 58 125 5.0E-25 T 29-03-2018 IPR021244 Protein of unknown function DUF2802 CVS42_RS05595 1bc5505c7cb10455a560c825c8624065 128 Gene3D G3DSA:3.90.20.10 1 123 4.0E-5 T 29-03-2018 CVS42_RS19230 ffb95d21d429a19e251dd80fb333928b 331 SUPERFAMILY SSF53697 17 326 1.0E-69 T 29-03-2018 CVS42_RS19230 ffb95d21d429a19e251dd80fb333928b 331 Pfam PF01380 SIS domain 48 179 2.4E-33 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CVS42_RS19230 ffb95d21d429a19e251dd80fb333928b 331 Gene3D G3DSA:3.10.580.10 207 329 9.4E-22 T 29-03-2018 CVS42_RS19230 ffb95d21d429a19e251dd80fb333928b 331 PIRSF PIRSF004692 2 331 8.6E-133 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CVS42_RS19230 ffb95d21d429a19e251dd80fb333928b 331 Gene3D G3DSA:3.40.50.10490 8 206 1.0E-59 T 29-03-2018 CVS42_RS19230 ffb95d21d429a19e251dd80fb333928b 331 SMART SM00116 217 265 15.0 T 29-03-2018 IPR000644 CBS domain CVS42_RS19230 ffb95d21d429a19e251dd80fb333928b 331 SMART SM00116 282 330 0.034 T 29-03-2018 IPR000644 CBS domain CVS42_RS19230 ffb95d21d429a19e251dd80fb333928b 331 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 52 320 2.3E-110 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CVS42_RS19230 ffb95d21d429a19e251dd80fb333928b 331 Pfam PF00571 CBS domain 276 328 1.8E-9 T 29-03-2018 IPR000644 CBS domain CVS42_RS19230 ffb95d21d429a19e251dd80fb333928b 331 Pfam PF00571 CBS domain 208 264 3.8E-4 T 29-03-2018 IPR000644 CBS domain CVS42_RS09490 77072338cf50e603805cae2292468c8f 132 Gene3D G3DSA:3.40.630.30 2 124 6.4E-16 T 29-03-2018 CVS42_RS09490 77072338cf50e603805cae2292468c8f 132 Pfam PF13673 Acetyltransferase (GNAT) domain 25 114 2.7E-12 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS09490 77072338cf50e603805cae2292468c8f 132 SUPERFAMILY SSF55729 21 114 3.01E-17 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS06770 4460149281c4cc20479170fbfbffd82a 505 SUPERFAMILY SSF52172 22 179 6.12E-12 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS06770 4460149281c4cc20479170fbfbffd82a 505 SMART SM00471 320 457 4.2E-9 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS06770 4460149281c4cc20479170fbfbffd82a 505 Gene3D G3DSA:1.10.3210.10 267 497 7.0E-51 T 29-03-2018 CVS42_RS06770 4460149281c4cc20479170fbfbffd82a 505 Gene3D G3DSA:3.40.50.2300 14 248 9.1E-14 T 29-03-2018 CVS42_RS06770 4460149281c4cc20479170fbfbffd82a 505 SUPERFAMILY SSF109604 316 487 5.65E-39 T 29-03-2018 CVS42_RS06770 4460149281c4cc20479170fbfbffd82a 505 Pfam PF11849 Domain of unknown function (DUF3369) 146 301 3.8E-33 T 29-03-2018 IPR021800 Domain of unknown function DUF3369 CVS42_RS06770 4460149281c4cc20479170fbfbffd82a 505 Pfam PF00072 Response regulator receiver domain 25 134 8.0E-5 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06770 4460149281c4cc20479170fbfbffd82a 505 Pfam PF01966 HD domain 327 447 5.0E-20 T 29-03-2018 IPR006674 HD domain CVS42_RS12900 d7efcc9f4b339e825373240f01b7bae3 320 SMART SM01126 140 292 4.5E-45 T 29-03-2018 IPR024445 ISXO2-like transposase domain CVS42_RS12900 d7efcc9f4b339e825373240f01b7bae3 320 Gene3D G3DSA:1.10.10.10 6 151 1.4E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS12900 d7efcc9f4b339e825373240f01b7bae3 320 Pfam PF12762 ISXO2-like transposase domain 142 287 1.5E-14 T 29-03-2018 IPR024445 ISXO2-like transposase domain CVS42_RS12900 d7efcc9f4b339e825373240f01b7bae3 320 Pfam PF13384 Homeodomain-like domain 100 130 1.5E-6 T 29-03-2018 CVS42_RS03345 d7efcc9f4b339e825373240f01b7bae3 320 SMART SM01126 140 292 4.5E-45 T 29-03-2018 IPR024445 ISXO2-like transposase domain CVS42_RS03345 d7efcc9f4b339e825373240f01b7bae3 320 Gene3D G3DSA:1.10.10.10 6 151 1.4E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS03345 d7efcc9f4b339e825373240f01b7bae3 320 Pfam PF12762 ISXO2-like transposase domain 142 287 1.5E-14 T 29-03-2018 IPR024445 ISXO2-like transposase domain CVS42_RS03345 d7efcc9f4b339e825373240f01b7bae3 320 Pfam PF13384 Homeodomain-like domain 100 130 1.5E-6 T 29-03-2018 CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 Gene3D G3DSA:2.60.40.1180 95 131 1.1E-20 T 29-03-2018 CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 Gene3D G3DSA:2.60.40.1180 192 238 4.3E-22 T 29-03-2018 CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 Gene3D G3DSA:2.60.40.1180 132 191 1.1E-25 T 29-03-2018 CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 Gene3D G3DSA:2.60.40.1180 239 339 1.3E-27 T 29-03-2018 CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 Gene3D G3DSA:1.25.40.10 48 94 4.5E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 SUPERFAMILY SSF81901 39 157 3.66E-34 T 29-03-2018 CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 SMART SM00671 87 122 6.5E-13 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 SMART SM00671 231 266 7.2E-13 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 SMART SM00671 159 194 6.0E-13 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 SMART SM00671 267 302 6.1E-4 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 SMART SM00671 123 158 6.5E-13 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 SMART SM00671 195 230 1.5E-12 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 SMART SM00671 51 86 1.5E-12 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 Pfam PF08238 Sel1 repeat 123 158 5.1E-11 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 Pfam PF08238 Sel1 repeat 52 86 8.2E-10 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 Pfam PF08238 Sel1 repeat 159 193 4.4E-10 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 Pfam PF08238 Sel1 repeat 195 229 2.7E-10 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 Pfam PF08238 Sel1 repeat 87 122 5.1E-11 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 Pfam PF08238 Sel1 repeat 268 301 2.3E-4 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 Pfam PF08238 Sel1 repeat 231 266 2.4E-11 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS07980 6319e86b5f69ca660d695ff1dbb09738 339 SUPERFAMILY SSF81901 125 301 8.37E-56 T 29-03-2018 CVS42_RS16205 9d328e29f92495efd855a782f28f7e16 713 Gene3D G3DSA:1.10.287.950 488 713 2.4E-48 T 29-03-2018 CVS42_RS16205 9d328e29f92495efd855a782f28f7e16 713 Gene3D G3DSA:1.10.287.950 345 487 6.6E-5 T 29-03-2018 CVS42_RS16205 9d328e29f92495efd855a782f28f7e16 713 SMART SM00304 382 436 2.9E-13 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS16205 9d328e29f92495efd855a782f28f7e16 713 Gene3D G3DSA:3.30.450.20 83 224 3.5E-19 T 29-03-2018 CVS42_RS16205 9d328e29f92495efd855a782f28f7e16 713 SMART SM00283 451 712 1.4E-72 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS16205 9d328e29f92495efd855a782f28f7e16 713 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 549 576 6.1E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS16205 9d328e29f92495efd855a782f28f7e16 713 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 578 607 6.1E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS16205 9d328e29f92495efd855a782f28f7e16 713 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 358 378 6.1E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS16205 9d328e29f92495efd855a782f28f7e16 713 Gene3D G3DSA:3.30.450.20 225 344 1.1E-9 T 29-03-2018 CVS42_RS16205 9d328e29f92495efd855a782f28f7e16 713 Pfam PF00672 HAMP domain 382 432 3.4E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS16205 9d328e29f92495efd855a782f28f7e16 713 SUPERFAMILY SSF58104 404 713 1.83E-77 T 29-03-2018 CVS42_RS16205 9d328e29f92495efd855a782f28f7e16 713 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 497 679 1.0E-44 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS16205 9d328e29f92495efd855a782f28f7e16 713 Pfam PF02743 Cache domain 49 333 2.9E-14 T 29-03-2018 IPR033479 Double Cache domain 1 CVS42_RS17640 308712791a9745a05453099f379b5823 151 Gene3D G3DSA:3.90.420.10 1 151 8.8E-21 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CVS42_RS17640 308712791a9745a05453099f379b5823 151 SUPERFAMILY SSF56524 26 126 2.75E-15 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CVS42_RS04225 5f35cd9a2ff404c7466f4a25bda51110 998 Gene3D G3DSA:2.10.10.20 937 997 1.2E-10 T 29-03-2018 CVS42_RS04225 5f35cd9a2ff404c7466f4a25bda51110 998 SMART SM00495 16 67 1.5E-7 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04225 5f35cd9a2ff404c7466f4a25bda51110 998 SMART SM00495 953 995 5.9E-4 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04225 5f35cd9a2ff404c7466f4a25bda51110 998 Pfam PF06483 Chitinase C 756 922 4.9E-63 T 29-03-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CVS42_RS04225 5f35cd9a2ff404c7466f4a25bda51110 998 SUPERFAMILY SSF51055 944 997 1.47E-12 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04225 5f35cd9a2ff404c7466f4a25bda51110 998 Gene3D G3DSA:2.40.50.70 168 203 1.4E-7 T 29-03-2018 CVS42_RS04225 5f35cd9a2ff404c7466f4a25bda51110 998 SMART SM00636 297 747 1.1E-117 T 29-03-2018 IPR011583 Chitinase II GO:0008061 CVS42_RS04225 5f35cd9a2ff404c7466f4a25bda51110 998 Gene3D G3DSA:2.10.10.20 12 73 3.4E-10 T 29-03-2018 CVS42_RS04225 5f35cd9a2ff404c7466f4a25bda51110 998 Gene3D G3DSA:2.60.40.650 79 167 2.0E-7 T 29-03-2018 CVS42_RS04225 5f35cd9a2ff404c7466f4a25bda51110 998 SUPERFAMILY SSF51445 290 590 1.71E-78 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS04225 5f35cd9a2ff404c7466f4a25bda51110 998 SUPERFAMILY SSF51445 719 748 1.71E-78 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS04225 5f35cd9a2ff404c7466f4a25bda51110 998 Pfam PF00704 Glycosyl hydrolases family 18 298 747 8.4E-87 T 29-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 CVS42_RS04225 5f35cd9a2ff404c7466f4a25bda51110 998 SUPERFAMILY SSF54556 590 717 6.78E-10 T 29-03-2018 IPR029070 Chitinase insertion domain CVS42_RS04225 5f35cd9a2ff404c7466f4a25bda51110 998 Gene3D G3DSA:3.20.20.80 204 783 1.4E-87 T 29-03-2018 CVS42_RS04225 5f35cd9a2ff404c7466f4a25bda51110 998 ProSitePatterns PS01095 Chitinases family 18 active site. 432 440 - T 29-03-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 PRINTS PR00410 Phenol hydroxylase reductase family signature 52 59 2.4E-9 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 PRINTS PR00410 Phenol hydroxylase reductase family signature 109 128 2.4E-9 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 PRINTS PR00410 Phenol hydroxylase reductase family signature 93 102 2.4E-9 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 PRINTS PR00410 Phenol hydroxylase reductase family signature 199 207 2.4E-9 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 Gene3D G3DSA:3.10.20.30 230 327 1.4E-18 T 29-03-2018 IPR012675 Beta-grasp domain CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 SUPERFAMILY SSF54292 222 326 3.54E-21 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 109 128 1.6E-7 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 52 59 1.6E-7 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 199 207 1.6E-7 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 146 157 1.6E-7 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 SUPERFAMILY SSF52343 89 229 2.88E-37 T 29-03-2018 CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 279 287 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 Gene3D G3DSA:2.40.30.10 1 97 6.3E-19 T 29-03-2018 CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 SUPERFAMILY SSF63380 4 100 7.17E-23 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 252 320 2.6E-7 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 Pfam PF00175 Oxidoreductase NAD-binding domain 110 213 6.1E-15 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 Pfam PF00970 Oxidoreductase FAD-binding domain 33 99 2.8E-9 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CVS42_RS03250 babc3dd7057aa4e02af49750c1f28236 328 Gene3D G3DSA:3.40.50.80 98 229 6.8E-29 T 29-03-2018 CVS42_RS10865 81c035bca1d41e891d449b8e7f697101 300 PIRSF PIRSF000103 1 300 9.1E-76 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CVS42_RS10865 81c035bca1d41e891d449b8e7f697101 300 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 163 6.8E-50 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CVS42_RS10865 81c035bca1d41e891d449b8e7f697101 300 SUPERFAMILY SSF51735 3 164 1.49E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS10865 81c035bca1d41e891d449b8e7f697101 300 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 293 9.0E-123 T 29-03-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 CVS42_RS10865 81c035bca1d41e891d449b8e7f697101 300 Gene3D G3DSA:3.40.50.720 2 174 4.3E-36 T 29-03-2018 CVS42_RS10865 81c035bca1d41e891d449b8e7f697101 300 SUPERFAMILY SSF48179 165 293 7.03E-41 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CVS42_RS10865 81c035bca1d41e891d449b8e7f697101 300 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 29-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CVS42_RS10865 81c035bca1d41e891d449b8e7f697101 300 Gene3D G3DSA:1.10.1040.10 175 298 3.1E-31 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CVS42_RS10865 81c035bca1d41e891d449b8e7f697101 300 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 293 1.7E-36 T 29-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CVS42_RS00460 9bff9a925ee11998e4bc91e486e7e7a5 586 Gene3D G3DSA:3.40.50.2000 165 313 9.8E-10 T 29-03-2018 CVS42_RS00460 9bff9a925ee11998e4bc91e486e7e7a5 586 Gene3D G3DSA:3.20.20.370 314 581 4.1E-44 T 29-03-2018 CVS42_RS00460 9bff9a925ee11998e4bc91e486e7e7a5 586 Gene3D G3DSA:3.40.50.2000 1 164 6.4E-12 T 29-03-2018 CVS42_RS00460 9bff9a925ee11998e4bc91e486e7e7a5 586 SUPERFAMILY SSF53756 10 338 3.21E-35 T 29-03-2018 CVS42_RS00460 9bff9a925ee11998e4bc91e486e7e7a5 586 Pfam PF01522 Polysaccharide deacetylase 406 542 1.1E-31 T 29-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CVS42_RS00460 9bff9a925ee11998e4bc91e486e7e7a5 586 SUPERFAMILY SSF88713 367 563 1.85E-38 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CVS42_RS00460 9bff9a925ee11998e4bc91e486e7e7a5 586 Pfam PF13439 Glycosyltransferase Family 4 13 159 7.0E-23 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CVS42_RS06630 ba775a7bac33daebbab62699a3d1503f 493 SMART SM00155 228 255 1.5E-5 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CVS42_RS06630 ba775a7bac33daebbab62699a3d1503f 493 SMART SM00155 406 433 9.9E-5 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CVS42_RS06630 ba775a7bac33daebbab62699a3d1503f 493 SUPERFAMILY SSF56024 281 479 2.18E-45 T 29-03-2018 CVS42_RS06630 ba775a7bac33daebbab62699a3d1503f 493 Pfam PF13091 PLD-like domain 336 457 4.4E-24 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CVS42_RS06630 ba775a7bac33daebbab62699a3d1503f 493 Pfam PF13091 PLD-like domain 145 256 5.0E-13 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CVS42_RS06630 ba775a7bac33daebbab62699a3d1503f 493 Pfam PF13396 Phospholipase_D-nuclease N-terminal 32 68 1.3E-4 T 29-03-2018 IPR027379 Cardiolipin synthase N-terminal CVS42_RS06630 ba775a7bac33daebbab62699a3d1503f 493 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 17 493 3.5E-127 T 29-03-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 CVS42_RS06630 ba775a7bac33daebbab62699a3d1503f 493 Gene3D G3DSA:3.30.870.10 119 306 1.8E-28 T 29-03-2018 CVS42_RS06630 ba775a7bac33daebbab62699a3d1503f 493 SUPERFAMILY SSF56024 99 322 4.26E-49 T 29-03-2018 CVS42_RS06630 ba775a7bac33daebbab62699a3d1503f 493 Hamap MF_00190 Cardiolipin synthase A [clsA]. 11 493 50.595 T 29-03-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 CVS42_RS06630 ba775a7bac33daebbab62699a3d1503f 493 Gene3D G3DSA:3.30.870.10 307 478 1.7E-29 T 29-03-2018 CVS42_RS18870 fd736239ddb577588e303b96f3d42a11 238 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 234 2.6E-30 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS18870 fd736239ddb577588e303b96f3d42a11 238 Gene3D G3DSA:1.10.10.10 149 237 3.4E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18870 fd736239ddb577588e303b96f3d42a11 238 Gene3D G3DSA:1.10.10.10 100 148 1.2E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18870 fd736239ddb577588e303b96f3d42a11 238 Pfam PF04542 Sigma-70 region 2 27 99 1.2E-14 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS18870 fd736239ddb577588e303b96f3d42a11 238 SUPERFAMILY SSF88946 26 98 1.83E-20 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS18870 fd736239ddb577588e303b96f3d42a11 238 Gene3D G3DSA:1.10.1740.10 23 96 6.5E-16 T 29-03-2018 CVS42_RS18870 fd736239ddb577588e303b96f3d42a11 238 SUPERFAMILY SSF88659 157 236 4.49E-15 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS18870 fd736239ddb577588e303b96f3d42a11 238 Pfam PF04539 Sigma-70 region 3 111 172 1.2E-9 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS18870 fd736239ddb577588e303b96f3d42a11 238 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 204 230 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS18870 fd736239ddb577588e303b96f3d42a11 238 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 27 234 6.9E-81 T 29-03-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CVS42_RS18870 fd736239ddb577588e303b96f3d42a11 238 Pfam PF04545 Sigma-70, region 4 183 232 5.0E-12 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS18870 fd736239ddb577588e303b96f3d42a11 238 SUPERFAMILY SSF88659 100 166 3.75E-13 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS00115 4ddf3ce65cf6424ae9e4766c53619c47 375 SUPERFAMILY SSF103473 6 370 3.01E-45 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS00115 4ddf3ce65cf6424ae9e4766c53619c47 375 Pfam PF07690 Major Facilitator Superfamily 21 345 5.5E-33 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS00115 4ddf3ce65cf6424ae9e4766c53619c47 375 Gene3D G3DSA:1.20.1250.20 2 192 8.2E-28 T 29-03-2018 CVS42_RS00115 4ddf3ce65cf6424ae9e4766c53619c47 375 Gene3D G3DSA:1.20.1250.20 193 371 5.0E-4 T 29-03-2018 CVS42_RS04780 73fc60874726ebdcaf1154053657fc23 360 SUPERFAMILY SSF56796 4 355 5.89E-119 T 29-03-2018 CVS42_RS04780 73fc60874726ebdcaf1154053657fc23 360 Pfam PF01761 3-dehydroquinate synthase 65 323 8.5E-109 T 29-03-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CVS42_RS04780 73fc60874726ebdcaf1154053657fc23 360 Gene3D G3DSA:3.40.50.1970 5 170 3.9E-53 T 29-03-2018 CVS42_RS04780 73fc60874726ebdcaf1154053657fc23 360 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 356 42.53 T 29-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CVS42_RS04780 73fc60874726ebdcaf1154053657fc23 360 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 352 4.5E-118 T 29-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CVS42_RS04780 73fc60874726ebdcaf1154053657fc23 360 PIRSF PIRSF001455 4 358 5.8E-107 T 29-03-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CVS42_RS04780 73fc60874726ebdcaf1154053657fc23 360 Gene3D G3DSA:1.20.1090.10 171 360 4.3E-67 T 29-03-2018 CVS42_RS03840 4f3d8b22d08fc59e144082468e2663f5 553 SUPERFAMILY SSF116726 285 360 7.19E-14 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS03840 4f3d8b22d08fc59e144082468e2663f5 553 Pfam PF06826 Predicted Permease Membrane Region 374 546 9.2E-46 T 29-03-2018 IPR006512 YidE/YbjL duplication CVS42_RS03840 4f3d8b22d08fc59e144082468e2663f5 553 Pfam PF06826 Predicted Permease Membrane Region 11 179 1.8E-42 T 29-03-2018 IPR006512 YidE/YbjL duplication CVS42_RS03840 4f3d8b22d08fc59e144082468e2663f5 553 Gene3D G3DSA:3.30.70.1450 193 278 9.9E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS03840 4f3d8b22d08fc59e144082468e2663f5 553 Gene3D G3DSA:3.30.70.1450 279 366 1.9E-13 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS03840 4f3d8b22d08fc59e144082468e2663f5 553 Pfam PF02080 TrkA-C domain 212 273 8.3E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS03840 4f3d8b22d08fc59e144082468e2663f5 553 Pfam PF02080 TrkA-C domain 291 358 1.1E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS03840 4f3d8b22d08fc59e144082468e2663f5 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 1.1E-35 T 29-03-2018 IPR006512 YidE/YbjL duplication CVS42_RS03840 4f3d8b22d08fc59e144082468e2663f5 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 1.8E-45 T 29-03-2018 IPR006512 YidE/YbjL duplication CVS42_RS03840 4f3d8b22d08fc59e144082468e2663f5 553 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 553 55.727 T 29-03-2018 IPR023018 Transport protein YidE, putative CVS42_RS03840 4f3d8b22d08fc59e144082468e2663f5 553 SUPERFAMILY SSF116726 203 271 4.58E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS10010 008713efb1aefc849b35e45fdfe45402 110 TIGRFAM TIGR02610 PHA_gran_rgn: putative polyhydroxyalkanoic acid system protein 13 104 2.3E-15 T 29-03-2018 IPR013433 Putative polyhydroxyalkanoic acid system protein CVS42_RS10010 008713efb1aefc849b35e45fdfe45402 110 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 15 104 3.1E-24 T 29-03-2018 IPR013433 Putative polyhydroxyalkanoic acid system protein CVS42_RS12815 e6cbaba1a703e09ab1ae733ed3f7b555 314 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 3 311 6.2E-124 T 29-03-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 CVS42_RS12815 e6cbaba1a703e09ab1ae733ed3f7b555 314 Pfam PF03741 Integral membrane protein TerC family 77 279 4.0E-56 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CVS42_RS00125 0c19e9b5dfd09a34fdf7b8fdef893cdc 862 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 19 227 2.6E-92 T 29-03-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 CVS42_RS00125 0c19e9b5dfd09a34fdf7b8fdef893cdc 862 Gene3D G3DSA:3.40.50.620 230 357 8.5E-5 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS00125 0c19e9b5dfd09a34fdf7b8fdef893cdc 862 Pfam PF00512 His Kinase A (phospho-acceptor) domain 634 700 1.1E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS00125 0c19e9b5dfd09a34fdf7b8fdef893cdc 862 Gene3D G3DSA:3.30.565.10 696 857 4.4E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00125 0c19e9b5dfd09a34fdf7b8fdef893cdc 862 Pfam PF13493 Domain of unknown function (DUF4118) 382 481 8.6E-21 T 29-03-2018 IPR025201 Sensor protein KdpD, transmembrane domain CVS42_RS00125 0c19e9b5dfd09a34fdf7b8fdef893cdc 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 782 796 2.1E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS00125 0c19e9b5dfd09a34fdf7b8fdef893cdc 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 841 854 2.1E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS00125 0c19e9b5dfd09a34fdf7b8fdef893cdc 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 816 834 2.1E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS00125 0c19e9b5dfd09a34fdf7b8fdef893cdc 862 SUPERFAMILY SSF55874 691 856 3.41E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00125 0c19e9b5dfd09a34fdf7b8fdef893cdc 862 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 750 856 2.0E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00125 0c19e9b5dfd09a34fdf7b8fdef893cdc 862 SMART SM00387 745 857 1.4E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00125 0c19e9b5dfd09a34fdf7b8fdef893cdc 862 SMART SM00388 633 701 1.1E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS00125 0c19e9b5dfd09a34fdf7b8fdef893cdc 862 SUPERFAMILY SSF47384 627 701 1.08E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS00125 0c19e9b5dfd09a34fdf7b8fdef893cdc 862 Gene3D G3DSA:1.20.120.620 380 479 1.0E-18 T 29-03-2018 CVS42_RS00125 0c19e9b5dfd09a34fdf7b8fdef893cdc 862 Gene3D G3DSA:1.10.287.130 623 695 8.1E-15 T 29-03-2018 CVS42_RS00125 0c19e9b5dfd09a34fdf7b8fdef893cdc 862 Gene3D G3DSA:3.40.50.300 18 146 3.2E-22 T 29-03-2018 CVS42_RS13675 4e487c449f04fce236635fd1db2c0273 810 PIRSF PIRSF000379 48 810 1.3E-169 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CVS42_RS13675 4e487c449f04fce236635fd1db2c0273 810 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 9 810 0.0 T 29-03-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CVS42_RS13675 4e487c449f04fce236635fd1db2c0273 810 Pfam PF02901 Pyruvate formate lyase-like 11 671 1.0E-209 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CVS42_RS13675 4e487c449f04fce236635fd1db2c0273 810 Gene3D G3DSA:3.20.70.20 9 810 2.7E-268 T 29-03-2018 CVS42_RS13675 4e487c449f04fce236635fd1db2c0273 810 Pfam PF01228 Glycine radical 688 791 1.7E-28 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CVS42_RS13675 4e487c449f04fce236635fd1db2c0273 810 ProSitePatterns PS00850 Glycine radical domain signature. 781 789 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CVS42_RS13675 4e487c449f04fce236635fd1db2c0273 810 SUPERFAMILY SSF51998 3 809 2.04E-223 T 29-03-2018 CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 SMART SM01193 4 134 9.3E-93 T 29-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 431 9.1E-138 T 29-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 Hamap MF_00318 Enolase [eno]. 2 417 44.467 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 431 1.4E-207 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 Gene3D G3DSA:3.30.390.10 3 127 1.8E-51 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 Gene3D G3DSA:3.20.20.120 128 433 3.7E-103 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 SUPERFAMILY SSF51604 144 430 1.41E-127 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 PIRSF PIRSF001400 1 431 2.6E-192 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 Pfam PF03952 Enolase, N-terminal domain 4 134 8.4E-58 T 29-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 29-03-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 SMART SM01192 143 431 1.9E-213 T 29-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 SUPERFAMILY SSF54826 3 138 7.28E-56 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS03300 58245a22211df4fa0f67a4abfa679782 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS20100 9b453352659c70de1b39ce06ffc37369 384 SUPERFAMILY SSF52440 171 276 4.6E-35 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CVS42_RS20100 9b453352659c70de1b39ce06ffc37369 384 SUPERFAMILY SSF56059 263 381 2.86E-84 T 29-03-2018 CVS42_RS20100 9b453352659c70de1b39ce06ffc37369 384 SUPERFAMILY SSF56059 1 169 2.86E-84 T 29-03-2018 CVS42_RS20100 9b453352659c70de1b39ce06ffc37369 384 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 382 2.2E-146 T 29-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CVS42_RS02200 f82d523d37c1658c892ad50a0bfff7d2 302 SUPERFAMILY SSF53850 92 298 6.15E-33 T 29-03-2018 CVS42_RS02200 f82d523d37c1658c892ad50a0bfff7d2 302 Gene3D G3DSA:3.40.190.10 179 265 1.0E-17 T 29-03-2018 CVS42_RS02200 f82d523d37c1658c892ad50a0bfff7d2 302 SUPERFAMILY SSF46785 5 88 1.63E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02200 f82d523d37c1658c892ad50a0bfff7d2 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.9E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS02200 f82d523d37c1658c892ad50a0bfff7d2 302 Gene3D G3DSA:3.40.190.10 92 178 3.0E-7 T 29-03-2018 CVS42_RS02200 f82d523d37c1658c892ad50a0bfff7d2 302 Gene3D G3DSA:1.10.10.10 1 87 1.3E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02200 f82d523d37c1658c892ad50a0bfff7d2 302 Pfam PF03466 LysR substrate binding domain 92 296 3.7E-31 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS01120 47eb4ce8892defd3f7df4b89f9d1fb84 82 Pfam PF00366 Ribosomal protein S17 10 76 3.0E-34 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01120 47eb4ce8892defd3f7df4b89f9d1fb84 82 SUPERFAMILY SSF50249 5 82 1.33E-33 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS01120 47eb4ce8892defd3f7df4b89f9d1fb84 82 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.419 T 29-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01120 47eb4ce8892defd3f7df4b89f9d1fb84 82 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 29-03-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01120 47eb4ce8892defd3f7df4b89f9d1fb84 82 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 3.0E-33 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01120 47eb4ce8892defd3f7df4b89f9d1fb84 82 Gene3D G3DSA:2.40.50.140 5 82 2.2E-34 T 29-03-2018 CVS42_RS01120 47eb4ce8892defd3f7df4b89f9d1fb84 82 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 2.7E-39 T 29-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01120 47eb4ce8892defd3f7df4b89f9d1fb84 82 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 8.6E-14 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01120 47eb4ce8892defd3f7df4b89f9d1fb84 82 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 8.6E-14 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01120 47eb4ce8892defd3f7df4b89f9d1fb84 82 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 8.6E-14 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS15310 d7985853025688b2208a58642d53c23d 1279 SMART SM00487 260 480 3.6E-6 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS15310 d7985853025688b2208a58642d53c23d 1279 Pfam PF04851 Type III restriction enzyme, res subunit 263 455 1.5E-25 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CVS42_RS15310 d7985853025688b2208a58642d53c23d 1279 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 6 206 6.4E-20 T 29-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 CVS42_RS15310 d7985853025688b2208a58642d53c23d 1279 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 770 1061 2.4E-32 T 29-03-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal CVS42_RS15310 d7985853025688b2208a58642d53c23d 1279 SUPERFAMILY SSF52540 211 458 2.49E-21 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS15310 d7985853025688b2208a58642d53c23d 1279 Gene3D G3DSA:3.40.50.300 261 469 2.7E-16 T 29-03-2018 CVS42_RS15310 d7985853025688b2208a58642d53c23d 1279 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 8 763 1.2E-97 T 29-03-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 SUPERFAMILY SSF52935 326 478 1.22E-37 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 478 8.7E-167 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 Gene3D G3DSA:3.40.1380.20 325 479 5.3E-43 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 Gene3D G3DSA:3.20.20.60 169 324 2.1E-52 T 29-03-2018 CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 Gene3D G3DSA:3.20.20.60 3 168 2.8E-34 T 29-03-2018 CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 29-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 PRINTS PR01050 Pyruvate kinase family signature 316 332 8.4E-49 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 PRINTS PR01050 Pyruvate kinase family signature 60 76 8.4E-49 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 PRINTS PR01050 Pyruvate kinase family signature 272 296 8.4E-49 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 PRINTS PR01050 Pyruvate kinase family signature 220 246 8.4E-49 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 PRINTS PR01050 Pyruvate kinase family signature 187 201 8.4E-49 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 PRINTS PR01050 Pyruvate kinase family signature 297 315 8.4E-49 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 PRINTS PR01050 Pyruvate kinase family signature 247 271 8.4E-49 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 Pfam PF00224 Pyruvate kinase, barrel domain 3 341 3.0E-124 T 29-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 SUPERFAMILY SSF51621 168 342 2.37E-85 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 SUPERFAMILY SSF51621 2 76 2.37E-85 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 SUPERFAMILY SSF50800 71 166 1.05E-23 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CVS42_RS05435 cbf44cff9fa6d01f9e30eae49cccc77a 479 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 476 6.7E-31 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS04430 e087a902f301d5e07f9520c3b3e3cd02 216 SUPERFAMILY SSF52374 5 214 4.38E-54 T 29-03-2018 CVS42_RS04430 e087a902f301d5e07f9520c3b3e3cd02 216 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 66 1.3E-8 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CVS42_RS04430 e087a902f301d5e07f9520c3b3e3cd02 216 Gene3D G3DSA:3.40.50.620 2 213 1.3E-55 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS04430 e087a902f301d5e07f9520c3b3e3cd02 216 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 8 211 8.2E-53 T 29-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CVS42_RS04430 e087a902f301d5e07f9520c3b3e3cd02 216 Pfam PF01467 Cytidylyltransferase-like 8 185 7.7E-30 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CVS42_RS04430 e087a902f301d5e07f9520c3b3e3cd02 216 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 4 212 31.102 T 29-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CVS42_RS00650 9ad116630e158c583ce9406df8924fd4 581 Gene3D G3DSA:1.10.730.10 445 581 1.8E-43 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS00650 9ad116630e158c583ce9406df8924fd4 581 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 91 2.7E-25 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CVS42_RS00650 9ad116630e158c583ce9406df8924fd4 581 Pfam PF00750 tRNA synthetases class I (R) 102 450 4.1E-157 T 29-03-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 CVS42_RS00650 9ad116630e158c583ce9406df8924fd4 581 Gene3D G3DSA:3.40.50.620 112 444 1.4E-54 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS00650 9ad116630e158c583ce9406df8924fd4 581 Hamap MF_00123 Arginine--tRNA ligase [argS]. 7 581 27.246 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CVS42_RS00650 9ad116630e158c583ce9406df8924fd4 581 SUPERFAMILY SSF47323 458 581 6.28E-34 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS00650 9ad116630e158c583ce9406df8924fd4 581 Gene3D G3DSA:3.30.1360.70 1 110 9.3E-31 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CVS42_RS00650 9ad116630e158c583ce9406df8924fd4 581 SMART SM00836 464 581 5.1E-37 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CVS42_RS00650 9ad116630e158c583ce9406df8924fd4 581 SUPERFAMILY SSF55190 8 103 3.66E-25 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CVS42_RS00650 9ad116630e158c583ce9406df8924fd4 581 SUPERFAMILY SSF52374 114 457 3.85E-90 T 29-03-2018 CVS42_RS00650 9ad116630e158c583ce9406df8924fd4 581 Pfam PF05746 DALR anticodon binding domain 464 581 7.6E-32 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CVS42_RS00650 9ad116630e158c583ce9406df8924fd4 581 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 24 581 3.1E-183 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CVS42_RS00650 9ad116630e158c583ce9406df8924fd4 581 SMART SM01016 3 91 1.2E-39 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CVS42_RS00650 9ad116630e158c583ce9406df8924fd4 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 157 170 2.4E-20 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CVS42_RS00650 9ad116630e158c583ce9406df8924fd4 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 133 149 2.4E-20 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CVS42_RS00650 9ad116630e158c583ce9406df8924fd4 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 118 133 2.4E-20 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CVS42_RS00650 9ad116630e158c583ce9406df8924fd4 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 307 328 2.4E-20 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CVS42_RS07420 0147a8fd00d6d6edc2d5c66adf5a6478 383 Pfam PF04209 homogentisate 1,2-dioxygenase 105 375 2.3E-17 T 29-03-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 CVS42_RS07420 0147a8fd00d6d6edc2d5c66adf5a6478 383 Gene3D G3DSA:2.60.120.10 16 161 8.1E-10 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS07420 0147a8fd00d6d6edc2d5c66adf5a6478 383 Gene3D G3DSA:2.60.120.10 162 353 7.4E-43 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS07420 0147a8fd00d6d6edc2d5c66adf5a6478 383 SUPERFAMILY SSF51182 40 376 1.3E-86 T 29-03-2018 IPR011051 RmlC-like cupin domain CVS42_RS10135 75e07858af8c2f397ac444f4fe38e49b 220 SUPERFAMILY SSF56784 2 220 6.8E-55 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS10135 75e07858af8c2f397ac444f4fe38e49b 220 Gene3D G3DSA:3.40.50.1000 77 220 2.1E-31 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS10135 75e07858af8c2f397ac444f4fe38e49b 220 Gene3D G3DSA:1.10.150.240 18 76 3.2E-17 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CVS42_RS10135 75e07858af8c2f397ac444f4fe38e49b 220 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 107 183 3.1E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS10135 75e07858af8c2f397ac444f4fe38e49b 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 191 9.5E-30 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS01290 3e5899e2bd30438a256160a4cd09ece4 1202 Gene3D G3DSA:3.40.50.300 595 816 3.1E-23 T 29-03-2018 CVS42_RS01290 3e5899e2bd30438a256160a4cd09ece4 1202 Gene3D G3DSA:3.40.50.300 447 585 1.0E-12 T 29-03-2018 CVS42_RS01290 3e5899e2bd30438a256160a4cd09ece4 1202 Pfam PF13361 UvrD-like helicase C-terminal domain 444 655 1.3E-8 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CVS42_RS01290 3e5899e2bd30438a256160a4cd09ece4 1202 Pfam PF13361 UvrD-like helicase C-terminal domain 730 809 5.6E-12 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CVS42_RS01290 3e5899e2bd30438a256160a4cd09ece4 1202 Pfam PF12705 PD-(D/E)XK nuclease superfamily 961 1160 6.6E-7 T 29-03-2018 CVS42_RS01290 3e5899e2bd30438a256160a4cd09ece4 1202 SUPERFAMILY SSF52980 901 1184 4.61E-81 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CVS42_RS01290 3e5899e2bd30438a256160a4cd09ece4 1202 Gene3D G3DSA:3.90.320.10 891 1190 3.5E-78 T 29-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 CVS42_RS01290 3e5899e2bd30438a256160a4cd09ece4 1202 Gene3D G3DSA:3.40.50.300 6 446 5.1E-53 T 29-03-2018 CVS42_RS01290 3e5899e2bd30438a256160a4cd09ece4 1202 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 439 1.7E-60 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CVS42_RS01290 3e5899e2bd30438a256160a4cd09ece4 1202 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 3 1184 22.674 T 29-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CVS42_RS01290 3e5899e2bd30438a256160a4cd09ece4 1202 SUPERFAMILY SSF52540 125 209 1.18E-104 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS01290 3e5899e2bd30438a256160a4cd09ece4 1202 SUPERFAMILY SSF52540 328 822 1.18E-104 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS01290 3e5899e2bd30438a256160a4cd09ece4 1202 SUPERFAMILY SSF52540 11 87 1.18E-104 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS01290 3e5899e2bd30438a256160a4cd09ece4 1202 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 5 1183 0.0 T 29-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CVS42_RS03730 0a15d32be4a8dee22fe562e681df46f8 148 Pfam PF05232 Chlorhexidine efflux transporter 72 134 3.9E-25 T 29-03-2018 IPR007896 Chlorhexidine efflux transporter CVS42_RS03730 0a15d32be4a8dee22fe562e681df46f8 148 Pfam PF05232 Chlorhexidine efflux transporter 2 63 4.2E-22 T 29-03-2018 IPR007896 Chlorhexidine efflux transporter CVS42_RS18180 217cac3248fa9ada16126d0c9b99a069 396 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 386 23.411 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CVS42_RS18180 217cac3248fa9ada16126d0c9b99a069 396 Pfam PF06965 Na+/H+ antiporter 1 7 380 7.4E-148 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CVS42_RS18180 217cac3248fa9ada16126d0c9b99a069 396 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 379 1.0E-169 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CVS42_RS18180 217cac3248fa9ada16126d0c9b99a069 396 Gene3D G3DSA:1.20.1530.10 3 386 3.1E-149 T 29-03-2018 IPR023171 Na/H antiporter domain CVS42_RS13390 64ae440d2a3cbef070ec233f23215947 444 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 6.0E-142 T 29-03-2018 CVS42_RS13390 64ae440d2a3cbef070ec233f23215947 444 SUPERFAMILY SSF103473 16 438 3.79E-76 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS13390 64ae440d2a3cbef070ec233f23215947 444 PIRSF PIRSF002808 7 444 2.5E-144 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CVS42_RS13390 64ae440d2a3cbef070ec233f23215947 444 Gene3D G3DSA:1.20.1250.20 19 214 1.3E-31 T 29-03-2018 CVS42_RS13390 64ae440d2a3cbef070ec233f23215947 444 Pfam PF07690 Major Facilitator Superfamily 36 396 4.2E-45 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS13390 64ae440d2a3cbef070ec233f23215947 444 Gene3D G3DSA:1.20.1250.20 237 444 5.6E-26 T 29-03-2018 CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 SUPERFAMILY SSF50447 151 299 5.08E-33 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 Pfam PF03144 Elongation factor Tu domain 2 219 289 3.4E-9 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 Pfam PF00679 Elongation factor G C-terminus 396 476 8.5E-23 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 Gene3D G3DSA:3.30.70.240 401 481 3.3E-19 T 29-03-2018 CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 SUPERFAMILY SSF52540 3 207 1.4E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 Gene3D G3DSA:2.40.50.250 483 573 1.6E-40 T 29-03-2018 CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 Gene3D G3DSA:3.40.50.300 68 185 1.2E-30 T 29-03-2018 CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 SUPERFAMILY SSF54980 398 512 7.19E-29 T 29-03-2018 IPR035647 EF-G domain III/V-like CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 Gene3D G3DSA:2.40.30.10 186 300 2.7E-22 T 29-03-2018 CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 150 1.7E-25 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 SUPERFAMILY SSF54980 302 387 1.15E-15 T 29-03-2018 IPR035647 EF-G domain III/V-like CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 Gene3D G3DSA:3.30.70.870 302 400 1.7E-31 T 29-03-2018 CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 PRINTS PR00315 GTP-binding elongation factor signature 71 81 2.2E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 PRINTS PR00315 GTP-binding elongation factor signature 87 98 2.2E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 PRINTS PR00315 GTP-binding elongation factor signature 7 20 2.2E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 PRINTS PR00315 GTP-binding elongation factor signature 51 59 2.2E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 PRINTS PR00315 GTP-binding elongation factor signature 123 132 2.2E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 Gene3D G3DSA:3.40.50.300 2 67 1.5E-10 T 29-03-2018 CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 1.8E-292 T 29-03-2018 IPR006298 GTP-binding protein TypA GO:0005525 CVS42_RS21095 ad6ce7f87dcf1c0842146e89038fcf07 603 Pfam PF00009 Elongation factor Tu GTP binding domain 4 194 1.6E-57 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS18185 bbf236d61fe689017a71fd3daf61dc3b 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 29-03-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CVS42_RS18185 bbf236d61fe689017a71fd3daf61dc3b 264 Gene3D G3DSA:3.30.572.10 1 264 9.7E-133 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CVS42_RS18185 bbf236d61fe689017a71fd3daf61dc3b 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 4.4E-47 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CVS42_RS18185 bbf236d61fe689017a71fd3daf61dc3b 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 4.4E-47 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CVS42_RS18185 bbf236d61fe689017a71fd3daf61dc3b 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 4.4E-47 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CVS42_RS18185 bbf236d61fe689017a71fd3daf61dc3b 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 4.4E-47 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CVS42_RS18185 bbf236d61fe689017a71fd3daf61dc3b 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 4.4E-47 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CVS42_RS18185 bbf236d61fe689017a71fd3daf61dc3b 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.392 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CVS42_RS18185 bbf236d61fe689017a71fd3daf61dc3b 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 85 4.4E-40 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CVS42_RS18185 bbf236d61fe689017a71fd3daf61dc3b 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 8.5E-94 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CVS42_RS18185 bbf236d61fe689017a71fd3daf61dc3b 264 Pfam PF00303 Thymidylate synthase 3 264 4.4E-126 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CVS42_RS18185 bbf236d61fe689017a71fd3daf61dc3b 264 SUPERFAMILY SSF55831 1 264 1.7E-130 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CVS42_RS02920 8f87450582c0440bdfada4086cdd4d9a 272 SUPERFAMILY SSF56784 2 271 3.76E-63 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS02920 8f87450582c0440bdfada4086cdd4d9a 272 Gene3D G3DSA:3.40.50.1000 1 272 2.3E-41 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS02920 8f87450582c0440bdfada4086cdd4d9a 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 74 1.9E-12 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CVS42_RS02920 8f87450582c0440bdfada4086cdd4d9a 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 266 1.2E-55 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS02920 8f87450582c0440bdfada4086cdd4d9a 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 266 4.2E-55 T 29-03-2018 IPR000150 Cof family GO:0016787 CVS42_RS02920 8f87450582c0440bdfada4086cdd4d9a 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 6 17 - T 29-03-2018 CVS42_RS11600 4e656020ae3f680a8165e58de52f7282 315 SUPERFAMILY SSF144083 250 313 2.35E-20 T 29-03-2018 CVS42_RS11600 4e656020ae3f680a8165e58de52f7282 315 Pfam PF01544 CorA-like Mg2+ transporter protein 26 311 5.5E-57 T 29-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CVS42_RS11600 4e656020ae3f680a8165e58de52f7282 315 Gene3D G3DSA:1.20.58.340 248 315 8.4E-21 T 29-03-2018 CVS42_RS11600 4e656020ae3f680a8165e58de52f7282 315 SUPERFAMILY SSF143865 1 254 1.7E-27 T 29-03-2018 CVS42_RS11600 4e656020ae3f680a8165e58de52f7282 315 Gene3D G3DSA:1.20.58.340 120 247 1.0E-7 T 29-03-2018 CVS42_RS11600 4e656020ae3f680a8165e58de52f7282 315 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 25 315 4.1E-62 T 29-03-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 CVS42_RS11600 4e656020ae3f680a8165e58de52f7282 315 Gene3D G3DSA:3.30.460.20 1 119 9.9E-7 T 29-03-2018 CVS42_RS00805 cb13bfe3b3a9a9bef782e92dddd94137 384 SUPERFAMILY SSF52540 22 260 7.78E-86 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00805 cb13bfe3b3a9a9bef782e92dddd94137 384 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS00805 cb13bfe3b3a9a9bef782e92dddd94137 384 Gene3D G3DSA:3.40.50.300 18 253 1.9E-73 T 29-03-2018 CVS42_RS00805 cb13bfe3b3a9a9bef782e92dddd94137 384 Pfam PF08402 TOBE domain 300 382 2.3E-14 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CVS42_RS00805 cb13bfe3b3a9a9bef782e92dddd94137 384 SUPERFAMILY SSF50331 255 382 1.7E-16 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CVS42_RS00805 cb13bfe3b3a9a9bef782e92dddd94137 384 SMART SM00382 47 230 1.0E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS00805 cb13bfe3b3a9a9bef782e92dddd94137 384 Pfam PF00005 ABC transporter 38 180 3.4E-37 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS00805 cb13bfe3b3a9a9bef782e92dddd94137 384 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 53 382 1.2E-127 T 29-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 CVS42_RS01105 7a1dc7c416a51b672568e6078ebb6f89 237 SUPERFAMILY SSF54821 108 206 2.35E-40 T 29-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01105 7a1dc7c416a51b672568e6078ebb6f89 237 Gene3D G3DSA:3.30.300.20 17 107 7.6E-28 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CVS42_RS01105 7a1dc7c416a51b672568e6078ebb6f89 237 Pfam PF07650 KH domain 39 111 1.5E-18 T 29-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01105 7a1dc7c416a51b672568e6078ebb6f89 237 SMART SM00322 60 125 4.4E-7 T 29-03-2018 IPR004087 K Homology domain GO:0003676 CVS42_RS01105 7a1dc7c416a51b672568e6078ebb6f89 237 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.143 T 29-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CVS42_RS01105 7a1dc7c416a51b672568e6078ebb6f89 237 Gene3D G3DSA:3.30.1140.32 108 207 1.3E-39 T 29-03-2018 CVS42_RS01105 7a1dc7c416a51b672568e6078ebb6f89 237 SUPERFAMILY SSF54814 2 106 1.05E-37 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CVS42_RS01105 7a1dc7c416a51b672568e6078ebb6f89 237 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 29-03-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01105 7a1dc7c416a51b672568e6078ebb6f89 237 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.8E-99 T 29-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CVS42_RS01105 7a1dc7c416a51b672568e6078ebb6f89 237 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 7.7E-42 T 29-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS08765 3a92d481bb6770df09adc56c413b5b0f 292 SUPERFAMILY SSF46689 237 286 1.12E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS08765 3a92d481bb6770df09adc56c413b5b0f 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 283 1.9E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS08765 3a92d481bb6770df09adc56c413b5b0f 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 267 1.9E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS08765 3a92d481bb6770df09adc56c413b5b0f 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 238 279 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CVS42_RS08765 3a92d481bb6770df09adc56c413b5b0f 292 SMART SM00342 201 283 1.1E-28 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS08765 3a92d481bb6770df09adc56c413b5b0f 292 Gene3D G3DSA:1.10.10.60 136 239 7.0E-16 T 29-03-2018 CVS42_RS08765 3a92d481bb6770df09adc56c413b5b0f 292 Gene3D G3DSA:1.10.10.60 240 292 7.0E-16 T 29-03-2018 CVS42_RS08765 3a92d481bb6770df09adc56c413b5b0f 292 SUPERFAMILY SSF46689 186 234 3.29E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS08765 3a92d481bb6770df09adc56c413b5b0f 292 Pfam PF12833 Helix-turn-helix domain 207 284 2.9E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS15720 30999bbfea998098866356e8f289e936 703 SMART SM00642 214 664 1.5E-71 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS15720 30999bbfea998098866356e8f289e936 703 Pfam PF00128 Alpha amylase, catalytic domain 247 622 9.2E-46 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS15720 30999bbfea998098866356e8f289e936 703 SUPERFAMILY SSF51445 202 673 2.41E-78 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS15720 30999bbfea998098866356e8f289e936 703 Gene3D G3DSA:3.20.20.80 205 669 6.9E-79 T 29-03-2018 CVS42_RS15720 30999bbfea998098866356e8f289e936 703 Gene3D G3DSA:2.60.40.1180 670 702 0.063 T 29-03-2018 CVS42_RS15720 30999bbfea998098866356e8f289e936 703 Gene3D G3DSA:2.60.40.1180 145 192 0.14 T 29-03-2018 CVS42_RS15720 30999bbfea998098866356e8f289e936 703 PIRSF PIRSF036917 10 702 2.9E-271 T 29-03-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 CVS42_RS18655 e08482f39db5d498ca115be57b1ebdd2 244 Pfam PF12833 Helix-turn-helix domain 156 234 3.0E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS18655 e08482f39db5d498ca115be57b1ebdd2 244 SMART SM00342 150 233 5.2E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS18655 e08482f39db5d498ca115be57b1ebdd2 244 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 187 229 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CVS42_RS18655 e08482f39db5d498ca115be57b1ebdd2 244 SUPERFAMILY SSF46689 186 236 2.96E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS18655 e08482f39db5d498ca115be57b1ebdd2 244 Gene3D G3DSA:1.10.10.60 131 187 1.8E-10 T 29-03-2018 CVS42_RS18655 e08482f39db5d498ca115be57b1ebdd2 244 Gene3D G3DSA:2.60.120.10 3 68 2.2E-7 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS18655 e08482f39db5d498ca115be57b1ebdd2 244 SUPERFAMILY SSF46689 134 184 6.72E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS18655 e08482f39db5d498ca115be57b1ebdd2 244 SUPERFAMILY SSF51215 10 67 4.45E-10 T 29-03-2018 CVS42_RS18655 e08482f39db5d498ca115be57b1ebdd2 244 Pfam PF02311 AraC-like ligand binding domain 8 62 5.7E-8 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CVS42_RS18655 e08482f39db5d498ca115be57b1ebdd2 244 Gene3D G3DSA:1.10.10.60 188 241 6.6E-14 T 29-03-2018 CVS42_RS08215 d4741e5b43ed3b25c02e061071156889 697 Pfam PF14864 Alkyl sulfatase C-terminal 539 661 6.7E-34 T 29-03-2018 IPR029229 Alkyl sulfatase, C-terminal CVS42_RS08215 d4741e5b43ed3b25c02e061071156889 697 Pfam PF14863 Alkyl sulfatase dimerisation 392 530 2.1E-46 T 29-03-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 CVS42_RS08215 d4741e5b43ed3b25c02e061071156889 697 Gene3D G3DSA:1.25.40.10 460 525 4.7E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS08215 d4741e5b43ed3b25c02e061071156889 697 SMART SM00849 133 355 1.2E-15 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS08215 d4741e5b43ed3b25c02e061071156889 697 SUPERFAMILY SSF55718 541 661 3.53E-30 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CVS42_RS08215 d4741e5b43ed3b25c02e061071156889 697 Gene3D G3DSA:3.60.15.10 105 408 1.4E-20 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS08215 d4741e5b43ed3b25c02e061071156889 697 Gene3D G3DSA:3.30.1050.10 536 668 1.0E-19 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CVS42_RS08215 d4741e5b43ed3b25c02e061071156889 697 SUPERFAMILY SSF56281 31 532 2.1E-140 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS08215 d4741e5b43ed3b25c02e061071156889 697 Pfam PF00753 Metallo-beta-lactamase superfamily 129 355 6.6E-36 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS19680 8c7fc1e29f8ccc5228c472435d831926 352 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 108 118 - T 29-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CVS42_RS19680 8c7fc1e29f8ccc5228c472435d831926 352 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 30 38 - T 29-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CVS42_RS19680 8c7fc1e29f8ccc5228c472435d831926 352 SMART SM00870 27 346 3.4E-148 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CVS42_RS19680 8c7fc1e29f8ccc5228c472435d831926 352 PIRSF PIRSF500176 24 352 2.3E-82 T 29-03-2018 CVS42_RS19680 8c7fc1e29f8ccc5228c472435d831926 352 SUPERFAMILY SSF53774 25 351 2.75E-108 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CVS42_RS19680 8c7fc1e29f8ccc5228c472435d831926 352 Pfam PF00710 Asparaginase, N-terminal 27 220 2.3E-64 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CVS42_RS19680 8c7fc1e29f8ccc5228c472435d831926 352 PRINTS PR00139 Asparaginase/glutaminase family signature 286 304 2.7E-22 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CVS42_RS19680 8c7fc1e29f8ccc5228c472435d831926 352 PRINTS PR00139 Asparaginase/glutaminase family signature 107 125 2.7E-22 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CVS42_RS19680 8c7fc1e29f8ccc5228c472435d831926 352 PRINTS PR00139 Asparaginase/glutaminase family signature 28 39 2.7E-22 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CVS42_RS19680 8c7fc1e29f8ccc5228c472435d831926 352 Gene3D G3DSA:3.40.50.40 239 351 1.2E-28 T 29-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 CVS42_RS19680 8c7fc1e29f8ccc5228c472435d831926 352 Gene3D G3DSA:3.40.50.1170 23 235 6.2E-63 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CVS42_RS19680 8c7fc1e29f8ccc5228c472435d831926 352 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 8 352 3.7E-160 T 29-03-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 CVS42_RS19680 8c7fc1e29f8ccc5228c472435d831926 352 PIRSF PIRSF001220 22 352 1.8E-94 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CVS42_RS21875 6e2f092cf5a6cd15199703a7585c9440 85 Pfam PF04380 Membrane fusogenic activity 1 78 2.4E-30 T 29-03-2018 IPR007475 Membrane fusogenic activity CVS42_RS19350 ff3fed49efd47a4ed850f45526a5758c 244 SUPERFAMILY SSF69618 2 239 8.89E-58 T 29-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CVS42_RS19350 ff3fed49efd47a4ed850f45526a5758c 244 Gene3D G3DSA:3.40.50.10090 120 240 3.8E-21 T 29-03-2018 CVS42_RS19350 ff3fed49efd47a4ed850f45526a5758c 244 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 235 3.8E-41 T 29-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CVS42_RS19350 ff3fed49efd47a4ed850f45526a5758c 244 Gene3D G3DSA:3.40.50.10090 2 114 8.4E-19 T 29-03-2018 CVS42_RS10115 ea24901aeefc284657f0ccd3ae95f39d 339 SUPERFAMILY SSF53659 5 334 6.99E-102 T 29-03-2018 CVS42_RS10115 ea24901aeefc284657f0ccd3ae95f39d 339 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 338 138.367 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CVS42_RS10115 ea24901aeefc284657f0ccd3ae95f39d 339 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 333 7.9E-108 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CVS42_RS10115 ea24901aeefc284657f0ccd3ae95f39d 339 Gene3D G3DSA:3.40.718.10 1 335 3.0E-103 T 29-03-2018 CVS42_RS10115 ea24901aeefc284657f0ccd3ae95f39d 339 PIRSF PIRSF002465 2 338 1.3E-120 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CVS42_RS10115 ea24901aeefc284657f0ccd3ae95f39d 339 Pfam PF02504 Fatty acid synthesis protein 5 322 8.6E-103 T 29-03-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 CVS42_RS06860 6e19e17e0b75ba670ce8b395cce45ee2 348 PIRSF PIRSF006268 4 345 2.9E-79 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CVS42_RS06860 6e19e17e0b75ba670ce8b395cce45ee2 348 SUPERFAMILY SSF143631 32 343 3.4E-86 T 29-03-2018 IPR003374 ApbE-like domain CVS42_RS06860 6e19e17e0b75ba670ce8b395cce45ee2 348 Gene3D G3DSA:3.10.520.10 27 334 3.7E-47 T 29-03-2018 CVS42_RS06860 6e19e17e0b75ba670ce8b395cce45ee2 348 Pfam PF02424 ApbE family 39 322 1.8E-73 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CVS42_RS05200 457191921631507094f981193b89e16a 1159 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 664 2.4E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS05200 457191921631507094f981193b89e16a 1159 PRINTS PR00344 Bacterial sensor protein C-terminal signature 636 650 2.4E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS05200 457191921631507094f981193b89e16a 1159 PRINTS PR00344 Bacterial sensor protein C-terminal signature 693 706 2.4E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS05200 457191921631507094f981193b89e16a 1159 PRINTS PR00344 Bacterial sensor protein C-terminal signature 669 687 2.4E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS05200 457191921631507094f981193b89e16a 1159 Pfam PF00512 His Kinase A (phospho-acceptor) domain 488 552 4.1E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS05200 457191921631507094f981193b89e16a 1159 Gene3D G3DSA:3.30.450.20 132 255 7.7E-8 T 29-03-2018 CVS42_RS05200 457191921631507094f981193b89e16a 1159 SMART SM00304 405 458 3.5E-13 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS05200 457191921631507094f981193b89e16a 1159 SMART SM00304 997 1054 86.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS05200 457191921631507094f981193b89e16a 1159 Gene3D G3DSA:3.30.565.10 558 717 1.7E-43 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS05200 457191921631507094f981193b89e16a 1159 Gene3D G3DSA:3.30.450.20 418 493 1.1E-4 T 29-03-2018 CVS42_RS05200 457191921631507094f981193b89e16a 1159 SUPERFAMILY SSF55785 887 972 3.44E-8 T 29-03-2018 IPR000014 PAS domain CVS42_RS05200 457191921631507094f981193b89e16a 1159 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 900 961 3.2E-6 T 29-03-2018 IPR000014 PAS domain CVS42_RS05200 457191921631507094f981193b89e16a 1159 SMART SM00091 901 967 3.0E-6 T 29-03-2018 IPR000014 PAS domain CVS42_RS05200 457191921631507094f981193b89e16a 1159 SMART SM00448 750 863 1.5E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS05200 457191921631507094f981193b89e16a 1159 Gene3D G3DSA:3.30.450.20 902 1018 8.2E-9 T 29-03-2018 CVS42_RS05200 457191921631507094f981193b89e16a 1159 SMART SM00388 487 554 5.1E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS05200 457191921631507094f981193b89e16a 1159 SUPERFAMILY SSF158472 406 456 2.35E-9 T 29-03-2018 CVS42_RS05200 457191921631507094f981193b89e16a 1159 SMART SM00387 600 709 4.3E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS05200 457191921631507094f981193b89e16a 1159 Pfam PF08448 PAS fold 912 1003 3.2E-6 T 29-03-2018 IPR013656 PAS fold-4 CVS42_RS05200 457191921631507094f981193b89e16a 1159 Pfam PF00672 HAMP domain 405 453 5.0E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS05200 457191921631507094f981193b89e16a 1159 Pfam PF02743 Cache domain 168 367 4.7E-12 T 29-03-2018 IPR033479 Double Cache domain 1 CVS42_RS05200 457191921631507094f981193b89e16a 1159 Gene3D G3DSA:3.40.50.2300 746 901 3.3E-40 T 29-03-2018 CVS42_RS05200 457191921631507094f981193b89e16a 1159 SUPERFAMILY SSF52172 745 877 1.42E-39 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS05200 457191921631507094f981193b89e16a 1159 Gene3D G3DSA:1.10.287.130 494 550 4.9E-17 T 29-03-2018 CVS42_RS05200 457191921631507094f981193b89e16a 1159 Pfam PF00072 Response regulator receiver domain 752 863 4.0E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS05200 457191921631507094f981193b89e16a 1159 Gene3D G3DSA:3.30.450.20 256 384 6.5E-14 T 29-03-2018 CVS42_RS05200 457191921631507094f981193b89e16a 1159 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 601 708 9.9E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS05200 457191921631507094f981193b89e16a 1159 SUPERFAMILY SSF47384 478 555 1.41E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS05200 457191921631507094f981193b89e16a 1159 SUPERFAMILY SSF55874 543 709 1.57E-45 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS05430 852d1176eea4aafd3ea7160e8843ab35 287 SUPERFAMILY SSF53697 95 280 1.09E-40 T 29-03-2018 CVS42_RS05430 852d1176eea4aafd3ea7160e8843ab35 287 Pfam PF01380 SIS domain 128 255 3.7E-25 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CVS42_RS05430 852d1176eea4aafd3ea7160e8843ab35 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 79 9.5E-30 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CVS42_RS05430 852d1176eea4aafd3ea7160e8843ab35 287 Gene3D G3DSA:1.10.10.10 3 96 3.0E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS05430 852d1176eea4aafd3ea7160e8843ab35 287 SUPERFAMILY SSF46689 3 83 2.87E-22 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS05430 852d1176eea4aafd3ea7160e8843ab35 287 Gene3D G3DSA:3.40.50.10490 97 282 8.1E-36 T 29-03-2018 CVS42_RS21640 335c3f7fadeefd12b71558d7baef62e9 493 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 352 484 4.5E-20 T 29-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CVS42_RS21640 335c3f7fadeefd12b71558d7baef62e9 493 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 3.3E-26 T 29-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CVS42_RS21640 335c3f7fadeefd12b71558d7baef62e9 493 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 1.0E-129 T 29-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CVS42_RS21640 335c3f7fadeefd12b71558d7baef62e9 493 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 487 38.019 T 29-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CVS42_RS21640 335c3f7fadeefd12b71558d7baef62e9 493 SUPERFAMILY SSF51735 28 209 3.95E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS21640 335c3f7fadeefd12b71558d7baef62e9 493 SUPERFAMILY SSF48179 210 370 6.63E-41 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CVS42_RS21640 335c3f7fadeefd12b71558d7baef62e9 493 SUPERFAMILY SSF48179 348 486 4.08E-40 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CVS42_RS21640 335c3f7fadeefd12b71558d7baef62e9 493 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 34 204 1.9E-58 T 29-03-2018 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CVS42_RS21640 335c3f7fadeefd12b71558d7baef62e9 493 Gene3D G3DSA:3.40.50.720 56 208 3.5E-49 T 29-03-2018 CVS42_RS21640 335c3f7fadeefd12b71558d7baef62e9 493 Gene3D G3DSA:3.40.50.720 1 42 1.2E-6 T 29-03-2018 CVS42_RS21640 335c3f7fadeefd12b71558d7baef62e9 493 Gene3D G3DSA:1.10.1040.10 210 489 2.4E-81 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CVS42_RS03365 6e1efa8b6ce350b6a0cee16f82e59671 137 Gene3D G3DSA:3.10.580.10 1 66 1.5E-12 T 29-03-2018 CVS42_RS03365 6e1efa8b6ce350b6a0cee16f82e59671 137 Gene3D G3DSA:3.10.580.10 67 136 3.7E-16 T 29-03-2018 CVS42_RS03365 6e1efa8b6ce350b6a0cee16f82e59671 137 Pfam PF00571 CBS domain 3 57 2.7E-12 T 29-03-2018 IPR000644 CBS domain CVS42_RS03365 6e1efa8b6ce350b6a0cee16f82e59671 137 Pfam PF00571 CBS domain 78 130 3.4E-13 T 29-03-2018 IPR000644 CBS domain CVS42_RS03365 6e1efa8b6ce350b6a0cee16f82e59671 137 SMART SM00116 84 131 1.1E-8 T 29-03-2018 IPR000644 CBS domain CVS42_RS03365 6e1efa8b6ce350b6a0cee16f82e59671 137 SMART SM00116 10 57 2.4E-8 T 29-03-2018 IPR000644 CBS domain CVS42_RS03365 6e1efa8b6ce350b6a0cee16f82e59671 137 SUPERFAMILY SSF54631 1 131 2.95E-31 T 29-03-2018 CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 SMART SM00999 120 474 4.9E-218 T 29-03-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 SUPERFAMILY SSF56436 26 107 1.48E-33 T 29-03-2018 IPR016187 C-type lectin fold CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 PRINTS PR00754 Aerolysin signature 404 422 8.9E-110 T 29-03-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 PRINTS PR00754 Aerolysin signature 141 163 8.9E-110 T 29-03-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 PRINTS PR00754 Aerolysin signature 66 85 8.9E-110 T 29-03-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 PRINTS PR00754 Aerolysin signature 265 289 8.9E-110 T 29-03-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 PRINTS PR00754 Aerolysin signature 423 442 8.9E-110 T 29-03-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 PRINTS PR00754 Aerolysin signature 337 360 8.9E-110 T 29-03-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 PRINTS PR00754 Aerolysin signature 47 65 8.9E-110 T 29-03-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 PRINTS PR00754 Aerolysin signature 382 401 8.9E-110 T 29-03-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 PRINTS PR00754 Aerolysin signature 86 106 8.9E-110 T 29-03-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 Pfam PF01117 Aerolysin toxin 121 453 1.5E-136 T 29-03-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 Gene3D G3DSA:3.10.40.10 28 111 1.2E-34 T 29-03-2018 IPR005138 Aerolysin/Pertussis toxin APT CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 Pfam PF03440 Aerolysin/Pertussis toxin (APT) domain 25 105 3.2E-27 T 29-03-2018 IPR005138 Aerolysin/Pertussis toxin APT CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 Gene3D G3DSA:2.170.15.10 407 488 6.3E-19 T 29-03-2018 CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 SUPERFAMILY SSF56973 109 487 2.09E-130 T 29-03-2018 CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 ProSitePatterns PS00274 Aerolysin type toxins signature. 246 255 - T 29-03-2018 IPR005831 Aerolysin/haemolysin toxin, conserved site GO:0005576 CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 Gene3D G3DSA:3.30.412.10 283 406 7.7E-35 T 29-03-2018 CVS42_RS20115 159a9141913bbc86584b5170f1bb12aa 488 Gene3D G3DSA:3.30.412.10 118 272 4.8E-45 T 29-03-2018 CVS42_RS17295 2df79285678775e591597fca751b1496 384 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 6 324 50.479 T 29-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CVS42_RS17295 2df79285678775e591597fca751b1496 384 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 13 357 2.5E-146 T 29-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CVS42_RS17295 2df79285678775e591597fca751b1496 384 Pfam PF08331 Domain of unknown function (DUF1730) 61 148 1.9E-22 T 29-03-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 CVS42_RS17295 2df79285678775e591597fca751b1496 384 SUPERFAMILY SSF54862 197 295 1.8E-15 T 29-03-2018 CVS42_RS17295 2df79285678775e591597fca751b1496 384 Gene3D G3DSA:3.30.70.20 122 208 6.5E-5 T 29-03-2018 CVS42_RS17295 2df79285678775e591597fca751b1496 384 Gene3D G3DSA:3.30.70.20 209 371 1.2E-10 T 29-03-2018 CVS42_RS17295 2df79285678775e591597fca751b1496 384 Pfam PF13484 4Fe-4S double cluster binding domain 201 265 4.0E-19 T 29-03-2018 CVS42_RS17295 2df79285678775e591597fca751b1496 384 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 202 213 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 Pfam PF00684 DnaJ central domain 148 208 2.0E-15 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 Gene3D G3DSA:2.10.230.10 146 204 1.8E-20 T 29-03-2018 CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 SUPERFAMILY SSF49493 214 261 1.83E-20 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 SUPERFAMILY SSF49493 114 170 1.83E-20 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 PRINTS PR00625 DnaJ domain signature 25 40 1.2E-29 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 PRINTS PR00625 DnaJ domain signature 62 81 1.2E-29 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 PRINTS PR00625 DnaJ domain signature 7 25 1.2E-29 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 PRINTS PR00625 DnaJ domain signature 42 62 1.2E-29 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 SUPERFAMILY SSF57938 135 211 7.85E-23 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 Pfam PF00226 DnaJ domain 5 67 8.4E-27 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 SUPERFAMILY SSF46565 1 109 7.85E-36 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 SUPERFAMILY SSF49493 260 345 5.89E-22 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 29-03-2018 IPR018253 DnaJ domain, conserved site CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 Gene3D G3DSA:2.60.260.20 205 255 3.8E-12 T 29-03-2018 CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 Pfam PF01556 DnaJ C terminal domain 122 334 1.4E-45 T 29-03-2018 IPR002939 Chaperone DnaJ, C-terminal CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 Gene3D G3DSA:1.10.287.110 1 116 3.1E-35 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 350 2.1E-139 T 29-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 374 41.886 T 29-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 SMART SM00271 4 62 2.5E-30 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS14320 8e95ee6818f66e718de794923f059e55 380 Gene3D G3DSA:2.60.260.20 256 367 3.2E-27 T 29-03-2018 CVS42_RS13455 d0283d615563bdad01835ca6b31e0544 549 Gene3D G3DSA:1.10.3720.10 162 546 1.2E-37 T 29-03-2018 CVS42_RS13455 d0283d615563bdad01835ca6b31e0544 549 SUPERFAMILY SSF161098 264 531 2.75E-34 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS13455 d0283d615563bdad01835ca6b31e0544 549 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 317 544 8.5E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS13455 d0283d615563bdad01835ca6b31e0544 549 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 274 541 6.2E-74 T 29-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CVS42_RS18440 0b693e616d2acfec0afb01a8fe743561 406 Gene3D G3DSA:3.40.50.300 5 216 5.6E-58 T 29-03-2018 CVS42_RS18440 0b693e616d2acfec0afb01a8fe743561 406 Pfam PF00270 DEAD/DEAH box helicase 24 188 3.5E-44 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CVS42_RS18440 0b693e616d2acfec0afb01a8fe743561 406 SMART SM00487 19 216 6.5E-52 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS18440 0b693e616d2acfec0afb01a8fe743561 406 Pfam PF00271 Helicase conserved C-terminal domain 225 333 4.8E-24 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS18440 0b693e616d2acfec0afb01a8fe743561 406 Gene3D G3DSA:3.40.50.300 217 406 1.5E-40 T 29-03-2018 CVS42_RS18440 0b693e616d2acfec0afb01a8fe743561 406 SUPERFAMILY SSF52540 69 353 2.4E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS18440 0b693e616d2acfec0afb01a8fe743561 406 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 147 155 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CVS42_RS18440 0b693e616d2acfec0afb01a8fe743561 406 SMART SM00490 252 333 3.4E-27 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS17325 30f53b9bd71bd7027ee7eaac242124b7 183 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 21 178 2.4E-50 T 29-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 CVS42_RS17325 30f53b9bd71bd7027ee7eaac242124b7 183 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 18 182 47.361 T 29-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 CVS42_RS17325 30f53b9bd71bd7027ee7eaac242124b7 183 SUPERFAMILY SSF82679 18 119 2.22E-27 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CVS42_RS17325 30f53b9bd71bd7027ee7eaac242124b7 183 Pfam PF02357 Transcription termination factor nusG 19 112 2.7E-19 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CVS42_RS17325 30f53b9bd71bd7027ee7eaac242124b7 183 Gene3D G3DSA:3.30.70.940 9 117 4.4E-17 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CVS42_RS17325 30f53b9bd71bd7027ee7eaac242124b7 183 Gene3D G3DSA:2.30.30.30 132 181 5.2E-4 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CVS42_RS17325 30f53b9bd71bd7027ee7eaac242124b7 183 SMART SM00738 18 117 2.3E-16 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CVS42_RS20260 dff5006bb9008cf8ac5c0d1a3b431d34 309 Gene3D G3DSA:3.30.700.10 42 249 4.6E-5 T 29-03-2018 CVS42_RS20260 dff5006bb9008cf8ac5c0d1a3b431d34 309 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 40 61 6.8E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS20260 dff5006bb9008cf8ac5c0d1a3b431d34 309 Pfam PF07963 Prokaryotic N-terminal methylation motif 37 60 1.8E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS16970 09e79365a1ca5afd6134b90a80c7a991 348 SUPERFAMILY SSF52540 38 308 5.78E-75 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS16970 09e79365a1ca5afd6134b90a80c7a991 348 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS16970 09e79365a1ca5afd6134b90a80c7a991 348 Gene3D G3DSA:3.40.50.300 1 329 3.5E-84 T 29-03-2018 CVS42_RS16970 09e79365a1ca5afd6134b90a80c7a991 348 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 298 5.6E-16 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CVS42_RS16970 09e79365a1ca5afd6134b90a80c7a991 348 SMART SM00382 39 231 1.6E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS16970 09e79365a1ca5afd6134b90a80c7a991 348 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 318 1.2E-26 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CVS42_RS16970 09e79365a1ca5afd6134b90a80c7a991 348 Pfam PF00005 ABC transporter 31 181 7.2E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS00965 334923ec869007d130d3d1f74634572b 213 Pfam PF01081 KDPG and KHG aldolase 12 203 1.3E-76 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CVS42_RS00965 334923ec869007d130d3d1f74634572b 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 29-03-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CVS42_RS00965 334923ec869007d130d3d1f74634572b 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 29-03-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CVS42_RS00965 334923ec869007d130d3d1f74634572b 213 SUPERFAMILY SSF51569 3 212 4.03E-71 T 29-03-2018 CVS42_RS00965 334923ec869007d130d3d1f74634572b 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 10 210 4.4E-83 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CVS42_RS00965 334923ec869007d130d3d1f74634572b 213 Gene3D G3DSA:3.20.20.70 6 213 1.5E-34 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS14105 629a899bec2e3f32475254b0f8506590 218 Pfam PF01902 Diphthamide synthase 3 199 2.0E-28 T 29-03-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 CVS42_RS14105 629a899bec2e3f32475254b0f8506590 218 SUPERFAMILY SSF52402 1 213 8.16E-53 T 29-03-2018 CVS42_RS14105 629a899bec2e3f32475254b0f8506590 218 Gene3D G3DSA:3.90.1490.10 139 214 1.1E-15 T 29-03-2018 CVS42_RS14105 629a899bec2e3f32475254b0f8506590 218 Gene3D G3DSA:3.40.50.620 1 137 2.3E-20 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS06605 b84c82e921a43b13cdb0f0913962ae2f 70 Pfam PF07866 Protein of unknown function (DUF1653) 8 66 3.7E-23 T 29-03-2018 IPR023387 DUF1653-like domain CVS42_RS06605 b84c82e921a43b13cdb0f0913962ae2f 70 Gene3D G3DSA:2.30.30.320 1 70 5.4E-25 T 29-03-2018 IPR023387 DUF1653-like domain CVS42_RS00255 38fc38892be77fd5a28f7f84f8f7e59c 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.4E-27 T 29-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS00255 38fc38892be77fd5a28f7f84f8f7e59c 91 Gene3D G3DSA:3.90.940.10 1 91 1.2E-27 T 29-03-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CVS42_RS00255 38fc38892be77fd5a28f7f84f8f7e59c 91 Pfam PF01192 RNA polymerase Rpb6 10 59 1.9E-16 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CVS42_RS00255 38fc38892be77fd5a28f7f84f8f7e59c 91 SUPERFAMILY SSF63562 1 78 3.53E-24 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CVS42_RS00255 38fc38892be77fd5a28f7f84f8f7e59c 91 SMART SM01409 8 61 1.4E-14 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CVS42_RS00255 38fc38892be77fd5a28f7f84f8f7e59c 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.65 T 29-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS00470 a0259854244c6650b9e83f0a56301abc 358 SUPERFAMILY SSF53756 36 347 5.34E-36 T 29-03-2018 CVS42_RS00470 a0259854244c6650b9e83f0a56301abc 358 Gene3D G3DSA:3.40.50.2000 185 341 8.6E-16 T 29-03-2018 CVS42_RS00470 a0259854244c6650b9e83f0a56301abc 358 Gene3D G3DSA:3.40.50.2000 26 180 1.7E-14 T 29-03-2018 CVS42_RS00470 a0259854244c6650b9e83f0a56301abc 358 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 155 306 2.2E-9 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CVS42_RS18915 fb63e812706152d4df29bd820bb760af 299 SUPERFAMILY SSF64518 1 298 1.83E-52 T 29-03-2018 CVS42_RS18915 fb63e812706152d4df29bd820bb760af 299 Gene3D G3DSA:1.20.1330.10 38 273 2.9E-23 T 29-03-2018 CVS42_RS18915 fb63e812706152d4df29bd820bb760af 299 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 9.1E-13 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CVS42_RS18915 fb63e812706152d4df29bd820bb760af 299 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 185 5.3E-47 T 29-03-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 CVS42_RS16080 aae730c10a7cd3bdfcb46141c0e3ceb5 275 Gene3D G3DSA:1.10.166.10 3 69 2.8E-28 T 29-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 CVS42_RS16080 aae730c10a7cd3bdfcb46141c0e3ceb5 275 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 57.292 T 29-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CVS42_RS16080 aae730c10a7cd3bdfcb46141c0e3ceb5 275 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 273 3.6E-149 T 29-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CVS42_RS16080 aae730c10a7cd3bdfcb46141c0e3ceb5 275 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CVS42_RS16080 aae730c10a7cd3bdfcb46141c0e3ceb5 275 Gene3D G3DSA:2.160.10.10 87 257 7.7E-34 T 29-03-2018 CVS42_RS16080 aae730c10a7cd3bdfcb46141c0e3ceb5 275 SUPERFAMILY SSF51161 1 256 2.5E-77 T 29-03-2018 IPR011004 Trimeric LpxA-like CVS42_RS16080 aae730c10a7cd3bdfcb46141c0e3ceb5 275 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 2.0E-12 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS16080 aae730c10a7cd3bdfcb46141c0e3ceb5 275 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 2.4E-25 T 29-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 CVS42_RS16080 aae730c10a7cd3bdfcb46141c0e3ceb5 275 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 5.3E-4 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS07825 1c5192d4faa0b8ed74ecaa168c65e256 450 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 4 448 1.4E-129 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS07825 1c5192d4faa0b8ed74ecaa168c65e256 450 Gene3D G3DSA:3.30.70.260 285 365 4.0E-20 T 29-03-2018 CVS42_RS07825 1c5192d4faa0b8ed74ecaa168c65e256 450 SUPERFAMILY SSF55021 297 395 1.6E-18 T 29-03-2018 CVS42_RS07825 1c5192d4faa0b8ed74ecaa168c65e256 450 Pfam PF00696 Amino acid kinase family 5 278 3.6E-47 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS07825 1c5192d4faa0b8ed74ecaa168c65e256 450 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 5.6E-122 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS07825 1c5192d4faa0b8ed74ecaa168c65e256 450 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS07825 1c5192d4faa0b8ed74ecaa168c65e256 450 PIRSF PIRSF000726 2 450 2.4E-129 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS07825 1c5192d4faa0b8ed74ecaa168c65e256 450 SUPERFAMILY SSF53633 5 292 3.4E-76 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS07825 1c5192d4faa0b8ed74ecaa168c65e256 450 Gene3D G3DSA:3.40.1160.10 1 284 2.8E-64 T 29-03-2018 CVS42_RS07825 1c5192d4faa0b8ed74ecaa168c65e256 450 SUPERFAMILY SSF55021 377 448 2.58E-14 T 29-03-2018 CVS42_RS07825 1c5192d4faa0b8ed74ecaa168c65e256 450 Gene3D G3DSA:3.30.70.260 368 450 5.6E-15 T 29-03-2018 CVS42_RS08630 bd14c2171fbf2238f734cf48b594d295 578 SUPERFAMILY SSF161098 310 564 1.74E-34 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS08630 bd14c2171fbf2238f734cf48b594d295 578 Gene3D G3DSA:1.10.3720.10 314 574 1.2E-26 T 29-03-2018 CVS42_RS08630 bd14c2171fbf2238f734cf48b594d295 578 Gene3D G3DSA:1.10.3720.10 35 299 1.4E-38 T 29-03-2018 CVS42_RS08630 bd14c2171fbf2238f734cf48b594d295 578 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 38 577 2.7E-222 T 29-03-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative CVS42_RS08630 bd14c2171fbf2238f734cf48b594d295 578 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 286 6.6E-11 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS08630 bd14c2171fbf2238f734cf48b594d295 578 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 396 567 1.2E-9 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS08630 bd14c2171fbf2238f734cf48b594d295 578 SUPERFAMILY SSF161098 35 289 2.75E-48 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS03360 818b39943c17238add660fc9e4aa3782 636 Pfam PF12848 ABC transporter 217 299 1.7E-27 T 29-03-2018 IPR032781 ABC-transporter extension domain CVS42_RS03360 818b39943c17238add660fc9e4aa3782 636 Pfam PF00005 ABC transporter 328 459 4.1E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS03360 818b39943c17238add660fc9e4aa3782 636 Pfam PF00005 ABC transporter 17 178 2.0E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS03360 818b39943c17238add660fc9e4aa3782 636 Gene3D G3DSA:1.20.58.410 549 634 2.3E-7 T 29-03-2018 CVS42_RS03360 818b39943c17238add660fc9e4aa3782 636 Gene3D G3DSA:3.40.50.300 285 538 8.5E-48 T 29-03-2018 CVS42_RS03360 818b39943c17238add660fc9e4aa3782 636 SUPERFAMILY SSF52540 295 511 1.46E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS03360 818b39943c17238add660fc9e4aa3782 636 Pfam PF16326 ABC transporter C-terminal domain 560 625 6.8E-10 T 29-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CVS42_RS03360 818b39943c17238add660fc9e4aa3782 636 SMART SM00382 26 223 2.8E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS03360 818b39943c17238add660fc9e4aa3782 636 SMART SM00382 337 506 2.4E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS03360 818b39943c17238add660fc9e4aa3782 636 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS03360 818b39943c17238add660fc9e4aa3782 636 Gene3D G3DSA:3.40.50.300 97 284 2.0E-44 T 29-03-2018 CVS42_RS03360 818b39943c17238add660fc9e4aa3782 636 SUPERFAMILY SSF52540 4 81 3.75E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS03360 818b39943c17238add660fc9e4aa3782 636 SUPERFAMILY SSF52540 119 258 3.75E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS03360 818b39943c17238add660fc9e4aa3782 636 Gene3D G3DSA:3.40.50.300 6 96 4.6E-6 T 29-03-2018 CVS42_RS03360 818b39943c17238add660fc9e4aa3782 636 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS11995 33f1ad2d19267d8375412d6832d43ab0 256 SMART SM00382 40 225 1.4E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS11995 33f1ad2d19267d8375412d6832d43ab0 256 SUPERFAMILY SSF52540 17 247 1.56E-77 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11995 33f1ad2d19267d8375412d6832d43ab0 256 Pfam PF00005 ABC transporter 31 177 2.6E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS11995 33f1ad2d19267d8375412d6832d43ab0 256 PIRSF PIRSF039085 12 253 2.4E-101 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CVS42_RS11995 33f1ad2d19267d8375412d6832d43ab0 256 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS11995 33f1ad2d19267d8375412d6832d43ab0 256 Gene3D G3DSA:3.40.50.300 12 255 1.0E-78 T 29-03-2018 CVS42_RS11855 771732127233f2807503b22c49fa02f5 237 Gene3D G3DSA:3.20.20.70 40 220 6.6E-13 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS11855 771732127233f2807503b22c49fa02f5 237 Pfam PF04055 Radical SAM superfamily 40 152 2.4E-10 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS11855 771732127233f2807503b22c49fa02f5 237 Pfam PF13394 4Fe-4S single cluster domain 38 143 2.3E-13 T 29-03-2018 CVS42_RS11855 771732127233f2807503b22c49fa02f5 237 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 17 237 35.787 T 29-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CVS42_RS11855 771732127233f2807503b22c49fa02f5 237 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 23 237 2.1E-106 T 29-03-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CVS42_RS11855 771732127233f2807503b22c49fa02f5 237 PIRSF PIRSF000370 15 237 4.5E-66 T 29-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CVS42_RS11855 771732127233f2807503b22c49fa02f5 237 SUPERFAMILY SSF102114 38 133 3.92E-7 T 29-03-2018 CVS42_RS21030 0caf681a23cfb9f5879a6f1326b95513 273 SUPERFAMILY SSF51735 102 268 1.19E-40 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS21030 0caf681a23cfb9f5879a6f1326b95513 273 Gene3D G3DSA:3.40.50.720 112 272 4.2E-33 T 29-03-2018 CVS42_RS21030 0caf681a23cfb9f5879a6f1326b95513 273 Gene3D G3DSA:3.40.50.10860 1 111 6.8E-38 T 29-03-2018 CVS42_RS21030 0caf681a23cfb9f5879a6f1326b95513 273 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 191 3.3E-10 T 29-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CVS42_RS21030 0caf681a23cfb9f5879a6f1326b95513 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 5.6E-25 T 29-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CVS42_RS21030 0caf681a23cfb9f5879a6f1326b95513 273 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 270 3.5E-81 T 29-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CVS42_RS21030 0caf681a23cfb9f5879a6f1326b95513 273 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 269 31.338 T 29-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CVS42_RS21030 0caf681a23cfb9f5879a6f1326b95513 273 SUPERFAMILY SSF53223 1 101 6.33E-31 T 29-03-2018 CVS42_RS04735 52e230b6a4cc8ef9284407fdd6e85a2d 545 SMART SM00283 283 544 3.2E-86 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS04735 52e230b6a4cc8ef9284407fdd6e85a2d 545 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 185 2.7E-16 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CVS42_RS04735 52e230b6a4cc8ef9284407fdd6e85a2d 545 SMART SM00304 214 268 4.7E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS04735 52e230b6a4cc8ef9284407fdd6e85a2d 545 SMART SM00304 303 356 110.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS04735 52e230b6a4cc8ef9284407fdd6e85a2d 545 SUPERFAMILY SSF58104 234 545 1.57E-80 T 29-03-2018 CVS42_RS04735 52e230b6a4cc8ef9284407fdd6e85a2d 545 Pfam PF00672 HAMP domain 216 264 2.3E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS04735 52e230b6a4cc8ef9284407fdd6e85a2d 545 Gene3D G3DSA:1.10.287.950 324 545 7.5E-58 T 29-03-2018 CVS42_RS04735 52e230b6a4cc8ef9284407fdd6e85a2d 545 Gene3D G3DSA:1.20.120.30 24 188 5.0E-13 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CVS42_RS04735 52e230b6a4cc8ef9284407fdd6e85a2d 545 Gene3D G3DSA:1.10.287.1060 241 323 7.4E-5 T 29-03-2018 CVS42_RS04735 52e230b6a4cc8ef9284407fdd6e85a2d 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 510 7.0E-44 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS21755 1d4e3488f2e1b1ef3de523875b8f5412 115 SUPERFAMILY SSF55298 2 114 7.07E-28 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CVS42_RS21755 1d4e3488f2e1b1ef3de523875b8f5412 115 Pfam PF01042 Endoribonuclease L-PSP 4 114 1.3E-21 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CVS42_RS21755 1d4e3488f2e1b1ef3de523875b8f5412 115 Gene3D G3DSA:3.30.1330.40 3 115 2.1E-22 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CVS42_RS11575 81ff02613ba4dfc35f5b4d6b5027b9e0 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 3 361 50.589 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CVS42_RS11575 81ff02613ba4dfc35f5b4d6b5027b9e0 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 360 9.4E-154 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CVS42_RS11575 81ff02613ba4dfc35f5b4d6b5027b9e0 362 PIRSF PIRSF000525 1 362 5.3E-148 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CVS42_RS11575 81ff02613ba4dfc35f5b4d6b5027b9e0 362 Gene3D G3DSA:3.40.640.10 17 259 3.6E-22 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS11575 81ff02613ba4dfc35f5b4d6b5027b9e0 362 SUPERFAMILY SSF53383 3 360 3.53E-113 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS11575 81ff02613ba4dfc35f5b4d6b5027b9e0 362 Gene3D G3DSA:3.90.1150.10 260 360 7.3E-38 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS11575 81ff02613ba4dfc35f5b4d6b5027b9e0 362 Pfam PF00266 Aminotransferase class-V 5 350 4.1E-53 T 29-03-2018 IPR000192 Aminotransferase class V domain CVS42_RS11575 81ff02613ba4dfc35f5b4d6b5027b9e0 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 208 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CVS42_RS19595 057bfaed56f1746d015449a8bbbdfc48 428 SUPERFAMILY SSF53383 2 425 7.01E-140 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS19595 057bfaed56f1746d015449a8bbbdfc48 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS19595 057bfaed56f1746d015449a8bbbdfc48 428 Gene3D G3DSA:3.90.1150.10 1 184 1.2E-44 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS19595 057bfaed56f1746d015449a8bbbdfc48 428 Gene3D G3DSA:3.90.1150.10 312 428 3.1E-21 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS19595 057bfaed56f1746d015449a8bbbdfc48 428 Pfam PF00202 Aminotransferase class-III 33 395 1.6E-77 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS19595 057bfaed56f1746d015449a8bbbdfc48 428 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 8.9E-195 T 29-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CVS42_RS19595 057bfaed56f1746d015449a8bbbdfc48 428 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.747 T 29-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CVS42_RS19595 057bfaed56f1746d015449a8bbbdfc48 428 Gene3D G3DSA:3.40.640.10 185 311 2.5E-45 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS03485 3f333aa79f6032dfa1482754113b8b44 188 Gene3D G3DSA:1.10.357.10 58 188 2.3E-24 T 29-03-2018 CVS42_RS03485 3f333aa79f6032dfa1482754113b8b44 188 Gene3D G3DSA:1.10.10.60 2 57 1.0E-15 T 29-03-2018 CVS42_RS03485 3f333aa79f6032dfa1482754113b8b44 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 7.1E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS03485 3f333aa79f6032dfa1482754113b8b44 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 7.1E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS03485 3f333aa79f6032dfa1482754113b8b44 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 6.4E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS03485 3f333aa79f6032dfa1482754113b8b44 188 SUPERFAMILY SSF48498 76 186 6.18E-23 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CVS42_RS03485 3f333aa79f6032dfa1482754113b8b44 188 SUPERFAMILY SSF46689 3 78 1.85E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS03485 3f333aa79f6032dfa1482754113b8b44 188 Pfam PF16925 Bacterial transcriptional repressor C-terminal 96 184 1.7E-8 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CVS42_RS03485 3f333aa79f6032dfa1482754113b8b44 188 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CVS42_RS13605 63f0dfa9293ea987dac1797c0ae9e279 132 Pfam PF00460 Flagella basal body rod protein 19 39 1.5E-7 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CVS42_RS13605 63f0dfa9293ea987dac1797c0ae9e279 132 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 9.5E-35 T 29-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CVS42_RS13605 63f0dfa9293ea987dac1797c0ae9e279 132 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CVS42_RS13605 63f0dfa9293ea987dac1797c0ae9e279 132 PIRSF PIRSF002889 1 131 5.1E-40 T 29-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CVS42_RS01360 79377afa0b29a21c280835cd3c5f1678 544 Gene3D G3DSA:3.30.450.20 36 175 5.9E-19 T 29-03-2018 CVS42_RS01360 79377afa0b29a21c280835cd3c5f1678 544 Pfam PF02743 Cache domain 62 274 3.4E-22 T 29-03-2018 IPR033479 Double Cache domain 1 CVS42_RS01360 79377afa0b29a21c280835cd3c5f1678 544 SMART SM00267 352 518 1.2E-37 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS01360 79377afa0b29a21c280835cd3c5f1678 544 SUPERFAMILY SSF55073 368 517 7.85E-37 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS01360 79377afa0b29a21c280835cd3c5f1678 544 SUPERFAMILY SSF103190 105 196 6.28E-8 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CVS42_RS01360 79377afa0b29a21c280835cd3c5f1678 544 Gene3D G3DSA:3.30.450.20 176 289 8.8E-16 T 29-03-2018 CVS42_RS01360 79377afa0b29a21c280835cd3c5f1678 544 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 514 2.5E-31 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS01360 79377afa0b29a21c280835cd3c5f1678 544 Gene3D G3DSA:3.30.70.270 353 519 1.1E-41 T 29-03-2018 CVS42_RS01360 79377afa0b29a21c280835cd3c5f1678 544 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 515 5.2E-34 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 Gene3D G3DSA:3.30.310.50 373 444 2.5E-18 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 SUPERFAMILY SSF55957 356 443 6.15E-22 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 372 440 2.3E-14 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 Gene3D G3DSA:3.40.120.10 2 153 2.5E-51 T 29-03-2018 CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 253 3.4E-19 T 29-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 135 7.2E-46 T 29-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 29-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 SUPERFAMILY SSF53738 257 364 2.0E-30 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 Gene3D G3DSA:3.40.120.10 269 372 1.1E-28 T 29-03-2018 CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 441 2.5E-196 T 29-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 Gene3D G3DSA:3.40.120.10 155 268 4.4E-31 T 29-03-2018 CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 443 47.914 T 29-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 SUPERFAMILY SSF53738 155 255 5.1E-30 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 6.8E-14 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 6.8E-14 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 6.8E-14 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 365 1.6E-32 T 29-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS16650 93fd4eac4ddda32f75fb6e1cfe13b386 444 SUPERFAMILY SSF53738 2 180 3.45E-49 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS07975 810e54c656c1029cc73a7cdea6a15cdc 179 SUPERFAMILY SSF117782 68 175 1.57E-26 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 CVS42_RS07975 810e54c656c1029cc73a7cdea6a15cdc 179 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 66 173 18.203 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 CVS42_RS07975 810e54c656c1029cc73a7cdea6a15cdc 179 Pfam PF01906 Putative heavy-metal-binding 68 172 9.4E-26 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 CVS42_RS07975 810e54c656c1029cc73a7cdea6a15cdc 179 Gene3D G3DSA:3.30.110.70 67 173 5.3E-24 T 29-03-2018 IPR035439 Uncharacterised protein family UPF0145/C2CD5 Reactome: R-HSA-1445148 CVS42_RS02155 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 9.9E-62 T 29-03-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CVS42_RS02155 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 Pfam PF00294 pfkB family carbohydrate kinase 11 305 4.3E-46 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CVS42_RS02155 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 Gene3D G3DSA:3.40.1190.20 2 310 1.2E-56 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS02155 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 SUPERFAMILY SSF53613 11 309 7.64E-58 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS02155 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 2.9E-17 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CVS42_RS02155 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 SUPERFAMILY SSF52374 340 471 1.72E-22 T 29-03-2018 CVS42_RS02155 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 Gene3D G3DSA:3.40.50.620 316 475 1.8E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS02155 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.14 T 29-03-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CVS42_RS02155 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 312 6.4E-125 T 29-03-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CVS42_RS02155 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 Pfam PF01467 Cytidylyltransferase-like 345 442 3.8E-14 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CVS42_RS02155 d7c9be3d2d7ff12c8ca4d23c1e53fe69 475 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CVS42_RS06745 0675d04e5ee21ab874305da4a4c36114 254 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 254 2.2E-23 T 29-03-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CVS42_RS06745 0675d04e5ee21ab874305da4a4c36114 254 Gene3D G3DSA:3.60.15.10 2 254 1.7E-73 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS06745 0675d04e5ee21ab874305da4a4c36114 254 SMART SM00849 12 166 8.0E-34 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS06745 0675d04e5ee21ab874305da4a4c36114 254 PIRSF PIRSF005457 1 254 5.7E-93 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CVS42_RS06745 0675d04e5ee21ab874305da4a4c36114 254 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 254 44.599 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CVS42_RS06745 0675d04e5ee21ab874305da4a4c36114 254 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 3.6E-22 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS06745 0675d04e5ee21ab874305da4a4c36114 254 SUPERFAMILY SSF56281 5 254 2.1E-69 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS06745 0675d04e5ee21ab874305da4a4c36114 254 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 254 4.8E-101 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CVS42_RS07415 b4e0503480615a8c72defea2dc2f9c8e 378 PIRSF PIRSF009283 1 362 5.0E-121 T 29-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 CVS42_RS07415 b4e0503480615a8c72defea2dc2f9c8e 378 Gene3D G3DSA:3.10.180.10 165 362 3.1E-58 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS07415 b4e0503480615a8c72defea2dc2f9c8e 378 Gene3D G3DSA:3.10.180.10 7 162 4.0E-16 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS07415 b4e0503480615a8c72defea2dc2f9c8e 378 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 12 150 1.9E-56 T 29-03-2018 CVS42_RS07415 b4e0503480615a8c72defea2dc2f9c8e 378 SUPERFAMILY SSF54593 9 348 5.02E-78 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS07415 b4e0503480615a8c72defea2dc2f9c8e 378 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 170 282 4.2E-13 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CVS42_RS07415 b4e0503480615a8c72defea2dc2f9c8e 378 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 18 361 2.4E-129 T 29-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 CVS42_RS13485 21414f7af611b016ef813ddc4eda9cca 247 Gene3D G3DSA:1.10.8.60 181 247 1.9E-13 T 29-03-2018 CVS42_RS13485 21414f7af611b016ef813ddc4eda9cca 247 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 20 246 9.6E-88 T 29-03-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 CVS42_RS13485 21414f7af611b016ef813ddc4eda9cca 247 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 57 77 9.2E-5 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CVS42_RS13485 21414f7af611b016ef813ddc4eda9cca 247 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 145 172 9.2E-5 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CVS42_RS13485 21414f7af611b016ef813ddc4eda9cca 247 Gene3D G3DSA:3.40.50.300 8 178 1.4E-9 T 29-03-2018 CVS42_RS13485 21414f7af611b016ef813ddc4eda9cca 247 Pfam PF00308 Bacterial dnaA protein 32 226 3.2E-14 T 29-03-2018 IPR013317 Chromosomal replication initiator protein DnaA CVS42_RS13485 21414f7af611b016ef813ddc4eda9cca 247 SUPERFAMILY SSF52540 36 225 4.46E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS13535 c94d2cb93023c5f7ab4094ee111f0448 171 SUPERFAMILY SSF55021 85 163 3.55E-13 T 29-03-2018 CVS42_RS13535 c94d2cb93023c5f7ab4094ee111f0448 171 Pfam PF13740 ACT domain 4 65 4.6E-12 T 29-03-2018 CVS42_RS13535 c94d2cb93023c5f7ab4094ee111f0448 171 PIRSF PIRSF028103 1 169 8.6E-41 T 29-03-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 CVS42_RS13535 c94d2cb93023c5f7ab4094ee111f0448 171 SUPERFAMILY SSF55021 2 67 3.05E-11 T 29-03-2018 CVS42_RS13535 c94d2cb93023c5f7ab4094ee111f0448 171 Gene3D G3DSA:3.30.70.260 85 166 6.6E-13 T 29-03-2018 CVS42_RS13535 c94d2cb93023c5f7ab4094ee111f0448 171 Gene3D G3DSA:3.30.70.260 3 68 2.2E-11 T 29-03-2018 CVS42_RS05550 cd6d24dbf0062d5f7c5b54e64edb004b 127 Gene3D G3DSA:3.40.50.2300 2 126 7.5E-37 T 29-03-2018 CVS42_RS05550 cd6d24dbf0062d5f7c5b54e64edb004b 127 SMART SM00448 5 119 1.1E-34 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS05550 cd6d24dbf0062d5f7c5b54e64edb004b 127 Pfam PF00072 Response regulator receiver domain 7 119 1.5E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS05550 cd6d24dbf0062d5f7c5b54e64edb004b 127 SUPERFAMILY SSF52172 3 125 1.34E-36 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS17320 e0fd3caabed21ef3d99a507a9da543e5 266 Pfam PF03180 NLPA lipoprotein 30 266 9.2E-98 T 29-03-2018 IPR004872 Lipoprotein NlpA family CVS42_RS17320 e0fd3caabed21ef3d99a507a9da543e5 266 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 12 266 4.6E-120 T 29-03-2018 IPR004872 Lipoprotein NlpA family CVS42_RS17320 e0fd3caabed21ef3d99a507a9da543e5 266 SUPERFAMILY SSF53850 30 266 7.41E-82 T 29-03-2018 CVS42_RS17320 e0fd3caabed21ef3d99a507a9da543e5 266 Gene3D G3DSA:3.40.190.10 124 266 7.3E-48 T 29-03-2018 CVS42_RS17320 e0fd3caabed21ef3d99a507a9da543e5 266 Gene3D G3DSA:3.40.190.10 29 123 6.6E-23 T 29-03-2018 CVS42_RS17320 e0fd3caabed21ef3d99a507a9da543e5 266 PIRSF PIRSF002854 1 266 8.8E-99 T 29-03-2018 IPR004872 Lipoprotein NlpA family CVS42_RS04860 ee0f0b6553fbdabad1903153c7edf2f8 546 Pfam PF11941 Domain of unknown function (DUF3459) 447 537 3.5E-9 T 29-03-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) CVS42_RS04860 ee0f0b6553fbdabad1903153c7edf2f8 546 Gene3D G3DSA:3.20.20.80 10 464 4.0E-117 T 29-03-2018 CVS42_RS04860 ee0f0b6553fbdabad1903153c7edf2f8 546 SUPERFAMILY SSF51445 14 460 4.23E-131 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS04860 ee0f0b6553fbdabad1903153c7edf2f8 546 Pfam PF00128 Alpha amylase, catalytic domain 35 364 1.0E-98 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS04860 ee0f0b6553fbdabad1903153c7edf2f8 546 SMART SM00642 20 403 5.0E-126 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS04860 ee0f0b6553fbdabad1903153c7edf2f8 546 Gene3D G3DSA:2.60.40.1180 465 543 1.5E-8 T 29-03-2018 CVS42_RS20540 5088dbe4ec77dd786bd59d9403e06ab7 372 PRINTS PR00075 Fatty acid desaturase family 1 signature 229 243 2.5E-34 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CVS42_RS20540 5088dbe4ec77dd786bd59d9403e06ab7 372 PRINTS PR00075 Fatty acid desaturase family 1 signature 186 207 2.5E-34 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CVS42_RS20540 5088dbe4ec77dd786bd59d9403e06ab7 372 PRINTS PR00075 Fatty acid desaturase family 1 signature 35 57 2.5E-34 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CVS42_RS20540 5088dbe4ec77dd786bd59d9403e06ab7 372 PRINTS PR00075 Fatty acid desaturase family 1 signature 96 125 2.5E-34 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CVS42_RS20540 5088dbe4ec77dd786bd59d9403e06ab7 372 PRINTS PR00075 Fatty acid desaturase family 1 signature 58 78 2.5E-34 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CVS42_RS20540 5088dbe4ec77dd786bd59d9403e06ab7 372 PRINTS PR00075 Fatty acid desaturase family 1 signature 155 173 2.5E-34 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CVS42_RS20540 5088dbe4ec77dd786bd59d9403e06ab7 372 Pfam PF00487 Fatty acid desaturase 38 260 3.6E-22 T 29-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CVS42_RS20540 5088dbe4ec77dd786bd59d9403e06ab7 372 Gene3D G3DSA:1.20.1000.10 82 354 3.3E-4 T 29-03-2018 CVS42_RS20540 5088dbe4ec77dd786bd59d9403e06ab7 372 PIRSF PIRSF000345 5 321 4.1E-103 T 29-03-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 CVS42_RS01150 2d4019be6fcc30eee700bddddda15dc2 177 PIRSF PIRSF002162 1 177 2.6E-42 T 29-03-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01150 2d4019be6fcc30eee700bddddda15dc2 177 Pfam PF00347 Ribosomal protein L6 90 164 6.7E-20 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01150 2d4019be6fcc30eee700bddddda15dc2 177 Pfam PF00347 Ribosomal protein L6 11 82 6.6E-18 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01150 2d4019be6fcc30eee700bddddda15dc2 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.323 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CVS42_RS01150 2d4019be6fcc30eee700bddddda15dc2 177 Gene3D G3DSA:3.90.930.12 2 82 6.2E-24 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01150 2d4019be6fcc30eee700bddddda15dc2 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 29-03-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01150 2d4019be6fcc30eee700bddddda15dc2 177 SUPERFAMILY SSF56053 83 177 6.02E-35 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01150 2d4019be6fcc30eee700bddddda15dc2 177 SUPERFAMILY SSF56053 1 82 6.41E-23 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01150 2d4019be6fcc30eee700bddddda15dc2 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.8E-71 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CVS42_RS01150 2d4019be6fcc30eee700bddddda15dc2 177 Gene3D G3DSA:3.90.930.12 83 177 2.0E-38 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01150 2d4019be6fcc30eee700bddddda15dc2 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.2E-33 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CVS42_RS01150 2d4019be6fcc30eee700bddddda15dc2 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.2E-33 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CVS42_RS01150 2d4019be6fcc30eee700bddddda15dc2 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.2E-33 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CVS42_RS03605 b8dcf3370468313e29b67d78070a50d3 168 ProSitePatterns PS00893 Nudix box signature. 64 85 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CVS42_RS03605 b8dcf3370468313e29b67d78070a50d3 168 Gene3D G3DSA:3.90.79.10 29 167 2.1E-26 T 29-03-2018 CVS42_RS03605 b8dcf3370468313e29b67d78070a50d3 168 SUPERFAMILY SSF55811 2 162 2.17E-33 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CVS42_RS03605 b8dcf3370468313e29b67d78070a50d3 168 Pfam PF00293 NUDIX domain 33 150 3.4E-19 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CVS42_RS03605 b8dcf3370468313e29b67d78070a50d3 168 PRINTS PR00502 NUDIX hydrolase family signature 59 73 1.1E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CVS42_RS03605 b8dcf3370468313e29b67d78070a50d3 168 PRINTS PR00502 NUDIX hydrolase family signature 73 88 1.1E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CVS42_RS07205 51d94f9ed0b174f84d3390eab55d5f30 422 SUPERFAMILY SSF51905 4 178 8.83E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS07205 51d94f9ed0b174f84d3390eab55d5f30 422 SUPERFAMILY SSF51905 278 395 8.83E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS07205 51d94f9ed0b174f84d3390eab55d5f30 422 Pfam PF01494 FAD binding domain 6 347 3.8E-32 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 CVS42_RS07205 51d94f9ed0b174f84d3390eab55d5f30 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 1.9E-19 T 29-03-2018 CVS42_RS07205 51d94f9ed0b174f84d3390eab55d5f30 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 1.9E-19 T 29-03-2018 CVS42_RS07205 51d94f9ed0b174f84d3390eab55d5f30 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.9E-19 T 29-03-2018 CVS42_RS07205 51d94f9ed0b174f84d3390eab55d5f30 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 1.9E-19 T 29-03-2018 CVS42_RS07205 51d94f9ed0b174f84d3390eab55d5f30 422 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 392 7.8E-134 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CVS42_RS07205 51d94f9ed0b174f84d3390eab55d5f30 422 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 296 309 - T 29-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CVS42_RS07205 51d94f9ed0b174f84d3390eab55d5f30 422 Gene3D G3DSA:3.50.50.60 3 366 4.5E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS16445 4c09db2c43bb8861232f643c0057cd1f 645 Gene3D G3DSA:1.10.287.950 346 422 0.28 T 29-03-2018 CVS42_RS16445 4c09db2c43bb8861232f643c0057cd1f 645 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 485 512 7.0E-20 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS16445 4c09db2c43bb8861232f643c0057cd1f 645 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 7.0E-20 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS16445 4c09db2c43bb8861232f643c0057cd1f 645 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 514 543 7.0E-20 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS16445 4c09db2c43bb8861232f643c0057cd1f 645 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 456 604 9.1E-32 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS16445 4c09db2c43bb8861232f643c0057cd1f 645 SMART SM00283 397 623 2.7E-32 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS16445 4c09db2c43bb8861232f643c0057cd1f 645 SUPERFAMILY SSF58104 380 641 4.01E-49 T 29-03-2018 CVS42_RS16445 4c09db2c43bb8861232f643c0057cd1f 645 Gene3D G3DSA:1.10.287.950 423 638 6.6E-38 T 29-03-2018 CVS42_RS21320 cfe4ab33c359b46d4136e0b8716a9780 371 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 199 364 2.0E-49 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS21320 cfe4ab33c359b46d4136e0b8716a9780 371 SMART SM00267 189 365 9.3E-63 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS21320 cfe4ab33c359b46d4136e0b8716a9780 371 Pfam PF00990 Diguanylate cyclase, GGDEF domain 201 361 8.0E-51 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS21320 cfe4ab33c359b46d4136e0b8716a9780 371 SUPERFAMILY SSF55073 205 363 2.75E-48 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS21320 cfe4ab33c359b46d4136e0b8716a9780 371 Gene3D G3DSA:3.30.70.270 193 368 1.1E-53 T 29-03-2018 CVS42_RS12775 bb5c5e933edd25a3331161beee5a92cf 355 SUPERFAMILY SSF51569 8 345 1.67E-133 T 29-03-2018 CVS42_RS12775 bb5c5e933edd25a3331161beee5a92cf 355 Pfam PF00793 DAHP synthetase I family 44 338 7.6E-102 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CVS42_RS12775 bb5c5e933edd25a3331161beee5a92cf 355 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 345 7.2E-163 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CVS42_RS12775 bb5c5e933edd25a3331161beee5a92cf 355 PIRSF PIRSF001361 1 352 4.9E-155 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CVS42_RS12775 bb5c5e933edd25a3331161beee5a92cf 355 Gene3D G3DSA:3.20.20.70 8 354 7.6E-121 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS03170 1154e686d9820d23ccf390aa369a2939 264 Gene3D G3DSA:3.20.20.60 1 263 2.9E-83 T 29-03-2018 CVS42_RS03170 1154e686d9820d23ccf390aa369a2939 264 PIRSF PIRSF000388 1 264 3.4E-99 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CVS42_RS03170 1154e686d9820d23ccf390aa369a2939 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.988 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CVS42_RS03170 1154e686d9820d23ccf390aa369a2939 264 SUPERFAMILY SSF51621 3 263 2.67E-105 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CVS42_RS03170 1154e686d9820d23ccf390aa369a2939 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 3 263 4.2E-110 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CVS42_RS03170 1154e686d9820d23ccf390aa369a2939 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 9.9E-109 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CVS42_RS04630 0189c20474dabf6ec69bf33744f58652 462 SUPERFAMILY SSF51905 389 428 4.32E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS04630 0189c20474dabf6ec69bf33744f58652 462 SUPERFAMILY SSF51905 55 277 4.32E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS04630 0189c20474dabf6ec69bf33744f58652 462 Gene3D G3DSA:3.50.50.60 43 432 9.1E-40 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS04630 0189c20474dabf6ec69bf33744f58652 462 Pfam PF01266 FAD dependent oxidoreductase 56 416 7.0E-59 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CVS42_RS20925 f988f3ed64e5c87037b1dbf980e6be67 630 Gene3D G3DSA:1.10.287.950 305 401 1.9E-7 T 29-03-2018 CVS42_RS20925 f988f3ed64e5c87037b1dbf980e6be67 630 Gene3D G3DSA:1.10.287.950 402 630 1.0E-52 T 29-03-2018 CVS42_RS20925 f988f3ed64e5c87037b1dbf980e6be67 630 SMART SM00304 299 353 2.7E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS20925 f988f3ed64e5c87037b1dbf980e6be67 630 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 440 596 4.5E-42 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS20925 f988f3ed64e5c87037b1dbf980e6be67 630 Pfam PF00672 HAMP domain 305 349 4.0E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS20925 f988f3ed64e5c87037b1dbf980e6be67 630 Gene3D G3DSA:3.30.450.20 28 158 1.6E-22 T 29-03-2018 CVS42_RS20925 f988f3ed64e5c87037b1dbf980e6be67 630 SUPERFAMILY SSF58104 321 630 2.62E-77 T 29-03-2018 CVS42_RS20925 f988f3ed64e5c87037b1dbf980e6be67 630 SUPERFAMILY SSF103190 63 178 3.77E-12 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CVS42_RS20925 f988f3ed64e5c87037b1dbf980e6be67 630 Gene3D G3DSA:3.30.450.20 159 276 4.7E-24 T 29-03-2018 CVS42_RS20925 f988f3ed64e5c87037b1dbf980e6be67 630 Pfam PF02743 Cache domain 50 261 1.5E-29 T 29-03-2018 IPR033479 Double Cache domain 1 CVS42_RS20925 f988f3ed64e5c87037b1dbf980e6be67 630 SMART SM00283 368 629 1.2E-66 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS01195 ea5b5cd39817459a65c73732625395cb 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 29-03-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01195 ea5b5cd39817459a65c73732625395cb 206 Gene3D G3DSA:3.10.290.10 102 144 2.0E-15 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS01195 ea5b5cd39817459a65c73732625395cb 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 5.2E-33 T 29-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CVS42_RS01195 ea5b5cd39817459a65c73732625395cb 206 Pfam PF01479 S4 domain 97 143 4.4E-18 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS01195 ea5b5cd39817459a65c73732625395cb 206 SMART SM00363 96 160 3.8E-19 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS01195 ea5b5cd39817459a65c73732625395cb 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.356 T 29-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CVS42_RS01195 ea5b5cd39817459a65c73732625395cb 206 SMART SM01390 3 95 9.1E-52 T 29-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CVS42_RS01195 ea5b5cd39817459a65c73732625395cb 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 8.0E-86 T 29-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CVS42_RS01195 ea5b5cd39817459a65c73732625395cb 206 Gene3D G3DSA:1.10.1050.10 1 101 1.8E-42 T 29-03-2018 CVS42_RS01195 ea5b5cd39817459a65c73732625395cb 206 Gene3D G3DSA:1.10.1050.10 145 206 1.0E-17 T 29-03-2018 CVS42_RS01195 ea5b5cd39817459a65c73732625395cb 206 SUPERFAMILY SSF55174 3 206 3.01E-72 T 29-03-2018 CVS42_RS00455 7126929a79be7a91afd6c8dcecb27edb 318 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 317 1.9E-136 T 29-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CVS42_RS00455 7126929a79be7a91afd6c8dcecb27edb 318 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 318 49.5 T 29-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CVS42_RS00455 7126929a79be7a91afd6c8dcecb27edb 318 Gene3D G3DSA:3.90.25.10 170 318 4.3E-27 T 29-03-2018 CVS42_RS00455 7126929a79be7a91afd6c8dcecb27edb 318 Gene3D G3DSA:3.40.50.720 1 169 7.9E-15 T 29-03-2018 CVS42_RS00455 7126929a79be7a91afd6c8dcecb27edb 318 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 246 1.0E-43 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CVS42_RS00455 7126929a79be7a91afd6c8dcecb27edb 318 SUPERFAMILY SSF51735 1 316 2.23E-61 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS11705 00adb9e8b4bc874eed793233cc922110 371 PIRSF PIRSF000183 1 371 3.3E-149 T 29-03-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 CVS42_RS11705 00adb9e8b4bc874eed793233cc922110 371 SMART SM01002 149 297 2.3E-83 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CVS42_RS11705 00adb9e8b4bc874eed793233cc922110 371 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 3.5E-46 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CVS42_RS11705 00adb9e8b4bc874eed793233cc922110 371 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 369 1.8E-154 T 29-03-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 CVS42_RS11705 00adb9e8b4bc874eed793233cc922110 371 SUPERFAMILY SSF52283 305 359 4.59E-64 T 29-03-2018 CVS42_RS11705 00adb9e8b4bc874eed793233cc922110 371 SUPERFAMILY SSF52283 1 137 4.59E-64 T 29-03-2018 CVS42_RS11705 00adb9e8b4bc874eed793233cc922110 371 Gene3D G3DSA:3.40.50.720 1 189 8.5E-45 T 29-03-2018 CVS42_RS11705 00adb9e8b4bc874eed793233cc922110 371 Gene3D G3DSA:3.40.50.720 190 371 1.8E-43 T 29-03-2018 CVS42_RS11705 00adb9e8b4bc874eed793233cc922110 371 SUPERFAMILY SSF51735 137 303 7.2E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS11705 00adb9e8b4bc874eed793233cc922110 371 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 7.8E-81 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CVS42_RS11705 00adb9e8b4bc874eed793233cc922110 371 SMART SM01003 4 137 6.4E-80 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CVS42_RS07740 1c14e8702c4e5b9e1d8450f2f15fa627 373 Gene3D G3DSA:3.40.50.720 1 107 2.4E-22 T 29-03-2018 CVS42_RS07740 1c14e8702c4e5b9e1d8450f2f15fa627 373 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 274 4.3E-16 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CVS42_RS07740 1c14e8702c4e5b9e1d8450f2f15fa627 373 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 256 1.1E-24 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CVS42_RS07740 1c14e8702c4e5b9e1d8450f2f15fa627 373 SUPERFAMILY SSF51735 93 257 4.31E-28 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS07740 1c14e8702c4e5b9e1d8450f2f15fa627 373 SUPERFAMILY SSF52283 4 102 1.4E-19 T 29-03-2018 CVS42_RS07740 1c14e8702c4e5b9e1d8450f2f15fa627 373 Pfam PF11890 Domain of unknown function (DUF3410) 289 357 1.5E-22 T 29-03-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 CVS42_RS07740 1c14e8702c4e5b9e1d8450f2f15fa627 373 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 44.407 T 29-03-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 CVS42_RS07740 1c14e8702c4e5b9e1d8450f2f15fa627 373 Gene3D G3DSA:3.40.50.720 108 257 2.2E-24 T 29-03-2018 CVS42_RS22165 f1a87e9436d21278f422ecbb020d8136 208 SUPERFAMILY SSF53335 3 205 1.74E-39 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS22165 f1a87e9436d21278f422ecbb020d8136 208 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 201 27.685 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CVS42_RS22165 f1a87e9436d21278f422ecbb020d8136 208 Pfam PF02527 rRNA small subunit methyltransferase G 20 199 1.4E-62 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CVS42_RS22165 f1a87e9436d21278f422ecbb020d8136 208 PIRSF PIRSF003078 1 207 1.2E-61 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CVS42_RS22165 f1a87e9436d21278f422ecbb020d8136 208 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 203 3.6E-58 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CVS42_RS22165 f1a87e9436d21278f422ecbb020d8136 208 Gene3D G3DSA:3.40.50.150 1 206 5.3E-35 T 29-03-2018 CVS42_RS12670 0673e42c54bd814c3622a8a446583903 914 Pfam PF10531 SLBB domain 296 344 9.9E-9 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12670 0673e42c54bd814c3622a8a446583903 914 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 7.2E-31 T 29-03-2018 IPR026902 RnfC Barrel sandwich hybrid domain CVS42_RS12670 0673e42c54bd814c3622a8a446583903 914 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS12670 0673e42c54bd814c3622a8a446583903 914 Pfam PF12838 4Fe-4S dicluster domain 377 429 7.6E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS12670 0673e42c54bd814c3622a8a446583903 914 SUPERFAMILY SSF46548 335 445 7.5E-19 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CVS42_RS12670 0673e42c54bd814c3622a8a446583903 914 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 751 248.42 T 29-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CVS42_RS12670 0673e42c54bd814c3622a8a446583903 914 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 2.7E-42 T 29-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12670 0673e42c54bd814c3622a8a446583903 914 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 446 2.8E-176 T 29-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CVS42_RS12670 0673e42c54bd814c3622a8a446583903 914 SUPERFAMILY SSF142019 97 302 1.14E-52 T 29-03-2018 CVS42_RS12670 0673e42c54bd814c3622a8a446583903 914 Gene3D G3DSA:3.30.70.20 373 491 5.6E-15 T 29-03-2018 CVS42_RS12670 0673e42c54bd814c3622a8a446583903 914 Gene3D G3DSA:2.40.50.100 30 100 2.3E-5 T 29-03-2018 CVS42_RS08275 757e76d7c0690ec5d9ec4027eb1b07bd 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 186 2.2E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS08275 757e76d7c0690ec5d9ec4027eb1b07bd 637 SUPERFAMILY SSF54211 241 496 1.06E-101 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS08275 757e76d7c0690ec5d9ec4027eb1b07bd 637 SUPERFAMILY SSF110942 523 635 1.44E-37 T 29-03-2018 CVS42_RS08275 757e76d7c0690ec5d9ec4027eb1b07bd 637 PRINTS PR00775 90kDa heat shock protein signature 78 95 1.1E-61 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CVS42_RS08275 757e76d7c0690ec5d9ec4027eb1b07bd 637 PRINTS PR00775 90kDa heat shock protein signature 96 113 1.1E-61 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CVS42_RS08275 757e76d7c0690ec5d9ec4027eb1b07bd 637 PRINTS PR00775 90kDa heat shock protein signature 123 145 1.1E-61 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CVS42_RS08275 757e76d7c0690ec5d9ec4027eb1b07bd 637 PRINTS PR00775 90kDa heat shock protein signature 193 211 1.1E-61 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CVS42_RS08275 757e76d7c0690ec5d9ec4027eb1b07bd 637 PRINTS PR00775 90kDa heat shock protein signature 29 51 1.1E-61 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CVS42_RS08275 757e76d7c0690ec5d9ec4027eb1b07bd 637 PRINTS PR00775 90kDa heat shock protein signature 175 192 1.1E-61 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CVS42_RS08275 757e76d7c0690ec5d9ec4027eb1b07bd 637 PRINTS PR00775 90kDa heat shock protein signature 8 28 1.1E-61 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CVS42_RS08275 757e76d7c0690ec5d9ec4027eb1b07bd 637 Gene3D G3DSA:3.30.565.10 32 225 2.3E-53 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS08275 757e76d7c0690ec5d9ec4027eb1b07bd 637 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 29-03-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 CVS42_RS08275 757e76d7c0690ec5d9ec4027eb1b07bd 637 PIRSF PIRSF002583 2 637 2.0E-219 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CVS42_RS08275 757e76d7c0690ec5d9ec4027eb1b07bd 637 SMART SM00387 30 187 7.1E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS08275 757e76d7c0690ec5d9ec4027eb1b07bd 637 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 635 32.774 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CVS42_RS08275 757e76d7c0690ec5d9ec4027eb1b07bd 637 Pfam PF00183 Hsp90 protein 226 635 2.0E-133 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CVS42_RS08275 757e76d7c0690ec5d9ec4027eb1b07bd 637 SUPERFAMILY SSF55874 7 217 3.93E-66 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS20705 2d7bb4f1aa1329c862257e4bc8b9e0ba 217 SUPERFAMILY SSF51735 3 134 4.37E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS20705 2d7bb4f1aa1329c862257e4bc8b9e0ba 217 Gene3D G3DSA:3.40.50.720 1 141 3.3E-26 T 29-03-2018 CVS42_RS20705 2d7bb4f1aa1329c862257e4bc8b9e0ba 217 SUPERFAMILY SSF116726 136 216 9.16E-13 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS20705 2d7bb4f1aa1329c862257e4bc8b9e0ba 217 Gene3D G3DSA:3.30.70.1450 142 216 3.2E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS20705 2d7bb4f1aa1329c862257e4bc8b9e0ba 217 Pfam PF02254 TrkA-N domain 5 120 3.3E-28 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CVS42_RS09665 c490069980b02c91435a73206f4c8b31 334 SMART SM00354 1 71 1.9E-36 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS09665 c490069980b02c91435a73206f4c8b31 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 CVS42_RS09665 c490069980b02c91435a73206f4c8b31 334 Gene3D G3DSA:3.40.50.2300 55 175 1.7E-33 T 29-03-2018 CVS42_RS09665 c490069980b02c91435a73206f4c8b31 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.0E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS09665 c490069980b02c91435a73206f4c8b31 334 Gene3D G3DSA:3.40.50.2300 176 313 1.5E-50 T 29-03-2018 CVS42_RS09665 c490069980b02c91435a73206f4c8b31 334 Gene3D G3DSA:1.10.260.40 3 54 6.0E-20 T 29-03-2018 CVS42_RS09665 c490069980b02c91435a73206f4c8b31 334 Pfam PF13377 Periplasmic binding protein-like domain 169 330 4.0E-45 T 29-03-2018 CVS42_RS09665 c490069980b02c91435a73206f4c8b31 334 SUPERFAMILY SSF47413 1 59 8.13E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS09665 c490069980b02c91435a73206f4c8b31 334 SUPERFAMILY SSF53822 61 332 1.2E-94 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CVS42_RS08805 ea36ddd10d3704d11e5dfb2911608ff2 499 Gene3D G3DSA:3.40.630.10 159 487 1.8E-107 T 29-03-2018 CVS42_RS08805 ea36ddd10d3704d11e5dfb2911608ff2 499 SUPERFAMILY SSF53187 171 484 5.96E-95 T 29-03-2018 CVS42_RS08805 ea36ddd10d3704d11e5dfb2911608ff2 499 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 174 478 1.1E-99 T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CVS42_RS08805 ea36ddd10d3704d11e5dfb2911608ff2 499 PRINTS PR00481 Cytosol aminopeptidase signature 250 267 4.8E-41 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS08805 ea36ddd10d3704d11e5dfb2911608ff2 499 PRINTS PR00481 Cytosol aminopeptidase signature 309 330 4.8E-41 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS08805 ea36ddd10d3704d11e5dfb2911608ff2 499 PRINTS PR00481 Cytosol aminopeptidase signature 331 351 4.8E-41 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS08805 ea36ddd10d3704d11e5dfb2911608ff2 499 PRINTS PR00481 Cytosol aminopeptidase signature 359 374 4.8E-41 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS08805 ea36ddd10d3704d11e5dfb2911608ff2 499 PRINTS PR00481 Cytosol aminopeptidase signature 272 293 4.8E-41 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS04825 cee879b06b3e1e431f9fe467fdceacfe 339 Gene3D G3DSA:2.40.40.20 276 338 5.6E-15 T 29-03-2018 CVS42_RS04825 cee879b06b3e1e431f9fe467fdceacfe 339 Gene3D G3DSA:3.40.630.30 1 275 4.5E-19 T 29-03-2018 CVS42_RS04825 cee879b06b3e1e431f9fe467fdceacfe 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 5.5E-142 T 29-03-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CVS42_RS04825 cee879b06b3e1e431f9fe467fdceacfe 339 SUPERFAMILY SSF55729 1 338 1.06E-131 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS04825 cee879b06b3e1e431f9fe467fdceacfe 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 336 3.3E-141 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CVS42_RS04825 cee879b06b3e1e431f9fe467fdceacfe 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 7.5E-138 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CVS42_RS18495 5c20a99a6b2c4d30b4516bbde45467f9 295 SUPERFAMILY SSF102114 90 279 4.71E-11 T 29-03-2018 CVS42_RS18495 5c20a99a6b2c4d30b4516bbde45467f9 295 Gene3D G3DSA:3.30.70.20 81 113 3.8E-4 T 29-03-2018 CVS42_RS18495 5c20a99a6b2c4d30b4516bbde45467f9 295 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 80 91 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS18495 5c20a99a6b2c4d30b4516bbde45467f9 295 Pfam PF13353 4Fe-4S single cluster domain 21 143 2.6E-10 T 29-03-2018 CVS42_RS18495 5c20a99a6b2c4d30b4516bbde45467f9 295 SUPERFAMILY SSF54862 50 136 7.33E-15 T 29-03-2018 CVS42_RS18495 5c20a99a6b2c4d30b4516bbde45467f9 295 Pfam PF04055 Radical SAM superfamily 30 224 7.5E-18 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS18495 5c20a99a6b2c4d30b4516bbde45467f9 295 Gene3D G3DSA:3.30.70.20 61 80 1.3E-9 T 29-03-2018 CVS42_RS18495 5c20a99a6b2c4d30b4516bbde45467f9 295 PIRSF PIRSF000371 2 285 1.0E-71 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CVS42_RS18495 5c20a99a6b2c4d30b4516bbde45467f9 295 Gene3D G3DSA:3.30.70.20 33 60 2.4E-4 T 29-03-2018 CVS42_RS18495 5c20a99a6b2c4d30b4516bbde45467f9 295 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CVS42_RS18495 5c20a99a6b2c4d30b4516bbde45467f9 295 Gene3D G3DSA:3.80.30.10 116 283 2.8E-18 T 29-03-2018 CVS42_RS18495 5c20a99a6b2c4d30b4516bbde45467f9 295 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 10 286 1.3E-104 T 29-03-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW CVS42_RS13770 6abbfa6d910adefa8b0594d0b67b7e02 332 Gene3D G3DSA:3.40.50.2300 176 311 1.2E-44 T 29-03-2018 CVS42_RS13770 6abbfa6d910adefa8b0594d0b67b7e02 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.0E-18 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS13770 6abbfa6d910adefa8b0594d0b67b7e02 332 Pfam PF13377 Periplasmic binding protein-like domain 170 331 5.8E-37 T 29-03-2018 CVS42_RS13770 6abbfa6d910adefa8b0594d0b67b7e02 332 Gene3D G3DSA:3.40.50.2300 55 175 9.7E-33 T 29-03-2018 CVS42_RS13770 6abbfa6d910adefa8b0594d0b67b7e02 332 SMART SM00354 1 71 2.4E-30 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS13770 6abbfa6d910adefa8b0594d0b67b7e02 332 SUPERFAMILY SSF53822 61 332 6.87E-78 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CVS42_RS13770 6abbfa6d910adefa8b0594d0b67b7e02 332 SUPERFAMILY SSF47413 2 60 6.0E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS13770 6abbfa6d910adefa8b0594d0b67b7e02 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS13770 6abbfa6d910adefa8b0594d0b67b7e02 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS13770 6abbfa6d910adefa8b0594d0b67b7e02 332 Gene3D G3DSA:1.10.260.40 2 54 8.4E-22 T 29-03-2018 CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 Gene3D G3DSA:3.40.50.720 269 564 1.8E-102 T 29-03-2018 CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 SMART SM00919 271 530 2.1E-133 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 PRINTS PR00072 Malic enzyme signature 298 314 7.4E-75 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 PRINTS PR00072 Malic enzyme signature 87 111 7.4E-75 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 PRINTS PR00072 Malic enzyme signature 242 260 7.4E-75 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 PRINTS PR00072 Malic enzyme signature 407 423 7.4E-75 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 PRINTS PR00072 Malic enzyme signature 147 176 7.4E-75 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 PRINTS PR00072 Malic enzyme signature 267 283 7.4E-75 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 PRINTS PR00072 Malic enzyme signature 183 205 7.4E-75 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 SMART SM01274 81 261 9.3E-108 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 29-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 SUPERFAMILY SSF53223 7 270 1.15E-111 T 29-03-2018 CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 564 70.902 T 29-03-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 3.5E-79 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 Gene3D G3DSA:3.40.50.10380 15 268 6.0E-116 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 SUPERFAMILY SSF51735 271 561 2.23E-92 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 PIRSF PIRSF000106 2 562 1.9E-228 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS15440 0d32acb3d17f783b37516f19a7559866 564 Pfam PF03949 Malic enzyme, NAD binding domain 271 529 5.3E-98 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 SMART SM00400 36 90 9.9E-37 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 SMART SM00766 452 582 2.8E-24 T 29-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 Pfam PF08275 DNA primase catalytic core, N-terminal domain 127 251 6.8E-40 T 29-03-2018 IPR013264 DNA primase, catalytic core, N-terminal CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 SUPERFAMILY SSF56731 117 424 3.66E-106 T 29-03-2018 CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 SMART SM00493 259 330 4.2E-14 T 29-03-2018 IPR006171 TOPRIM domain CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 Pfam PF01807 CHC2 zinc finger 6 101 2.0E-40 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 Gene3D G3DSA:3.90.580.10 1 103 2.6E-36 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 Gene3D G3DSA:3.40.1360.10 241 367 3.2E-31 T 29-03-2018 CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 Gene3D G3DSA:1.10.860.10 435 588 2.2E-31 T 29-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 TIGRFAM TIGR01391 dnaG: DNA primase 4 418 4.0E-145 T 29-03-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 Pfam PF13662 Toprim domain 260 325 5.6E-13 T 29-03-2018 IPR006171 TOPRIM domain CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 Gene3D G3DSA:3.90.980.10 112 240 2.7E-43 T 29-03-2018 IPR013264 DNA primase, catalytic core, N-terminal CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 Hamap MF_00974 DNA primase [dnaG]. 4 583 29.223 T 29-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 Pfam PF10410 DnaB-helicase binding domain of primase 370 423 5.7E-8 T 29-03-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 Gene3D G3DSA:1.20.50.20 369 417 7.6E-7 T 29-03-2018 CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 SUPERFAMILY SSF117023 449 584 5.36E-32 T 29-03-2018 CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 PIRSF PIRSF002811 2 593 4.4E-141 T 29-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 SUPERFAMILY SSF57783 4 100 4.42E-37 T 29-03-2018 CVS42_RS17690 510c04d988f48b117a36dfc66a5f6247 595 Pfam PF08278 DNA primase DnaG DnaB-binding 454 581 2.5E-25 T 29-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CVS42_RS20225 0ce164b6584fa9f9db59ae8783ea1b7d 489 Pfam PF10150 Ribonuclease E/G family 124 393 3.9E-103 T 29-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CVS42_RS20225 0ce164b6584fa9f9db59ae8783ea1b7d 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 7.4E-172 T 29-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CVS42_RS20225 0ce164b6584fa9f9db59ae8783ea1b7d 489 Gene3D G3DSA:2.40.50.140 32 127 1.3E-29 T 29-03-2018 CVS42_RS20225 0ce164b6584fa9f9db59ae8783ea1b7d 489 SUPERFAMILY SSF50249 39 128 8.58E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS20225 0ce164b6584fa9f9db59ae8783ea1b7d 489 SMART SM00316 37 122 3.4E-8 T 29-03-2018 IPR022967 RNA-binding domain, S1 CVS42_RS20225 0ce164b6584fa9f9db59ae8783ea1b7d 489 Pfam PF00575 S1 RNA binding domain 38 109 2.2E-5 T 29-03-2018 IPR003029 S1 domain GO:0003676 CVS42_RS18350 179d1b0fdb5b21feb692c6d7dce93418 233 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CVS42_RS18350 179d1b0fdb5b21feb692c6d7dce93418 233 SUPERFAMILY SSF51419 1 228 2.36E-77 T 29-03-2018 IPR029066 PLP-binding barrel CVS42_RS18350 179d1b0fdb5b21feb692c6d7dce93418 233 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 4.6E-75 T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CVS42_RS18350 179d1b0fdb5b21feb692c6d7dce93418 233 Pfam PF01168 Alanine racemase, N-terminal domain 11 230 6.7E-31 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS18350 179d1b0fdb5b21feb692c6d7dce93418 233 Gene3D G3DSA:3.20.20.10 1 233 6.5E-69 T 29-03-2018 IPR029066 PLP-binding barrel CVS42_RS18350 179d1b0fdb5b21feb692c6d7dce93418 233 PIRSF PIRSF004848 1 233 1.6E-75 T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CVS42_RS10870 b3e064da86e8e21cc22f4012fc79fd9b 370 Gene3D G3DSA:3.90.226.10 6 350 2.8E-80 T 29-03-2018 CVS42_RS10870 b3e064da86e8e21cc22f4012fc79fd9b 370 Pfam PF16113 Enoyl-CoA hydratase/isomerase 18 344 3.9E-111 T 29-03-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 CVS42_RS10870 b3e064da86e8e21cc22f4012fc79fd9b 370 SUPERFAMILY SSF52096 13 201 9.32E-65 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS10870 b3e064da86e8e21cc22f4012fc79fd9b 370 SUPERFAMILY SSF52096 274 345 9.32E-65 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 Gene3D G3DSA:3.30.2090.10 705 796 4.1E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 Gene3D G3DSA:3.30.70.1430 38 138 2.2E-22 T 29-03-2018 CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 Gene3D G3DSA:3.30.70.1430 554 657 3.5E-4 T 29-03-2018 CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 Gene3D G3DSA:3.30.2090.10 180 266 1.0E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 SUPERFAMILY SSF82693 40 128 4.19E-17 T 29-03-2018 CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 SUPERFAMILY SSF82714 184 265 6.67E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 SUPERFAMILY SSF82866 301 489 4.58E-35 T 29-03-2018 CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 SUPERFAMILY SSF82866 795 1021 2.09E-35 T 29-03-2018 CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 SUPERFAMILY SSF82714 706 779 2.88E-9 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 SUPERFAMILY SSF82693 269 324 1.92E-7 T 29-03-2018 CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 SUPERFAMILY SSF82693 140 181 1.92E-7 T 29-03-2018 CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.1E-19 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.1E-19 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.1E-19 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.1E-19 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 3.1E-19 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.1E-19 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 Pfam PF00873 AcrB/AcrD/AcrF family 12 1015 3.8E-132 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 Gene3D G3DSA:1.20.1640.10 267 490 2.8E-34 T 29-03-2018 CVS42_RS01765 e5d25aff3e9af84d8497bb982de71ae7 1035 Gene3D G3DSA:1.20.1640.10 806 1019 8.2E-29 T 29-03-2018 CVS42_RS10680 2128c20411460b023470ab4d9a940462 176 SUPERFAMILY SSF53163 1 156 2.62E-47 T 29-03-2018 IPR023430 Peptidase HybD-like domain CVS42_RS10680 2128c20411460b023470ab4d9a940462 176 Gene3D G3DSA:3.40.50.1450 1 161 1.9E-53 T 29-03-2018 IPR023430 Peptidase HybD-like domain CVS42_RS10680 2128c20411460b023470ab4d9a940462 176 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 3 152 5.6E-48 T 29-03-2018 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 CVS42_RS10680 2128c20411460b023470ab4d9a940462 176 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 147 2.0E-48 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CVS42_RS10680 2128c20411460b023470ab4d9a940462 176 PRINTS PR00446 Hydrogen uptake protein signature 3 15 7.4E-24 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CVS42_RS10680 2128c20411460b023470ab4d9a940462 176 PRINTS PR00446 Hydrogen uptake protein signature 35 52 7.4E-24 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CVS42_RS10680 2128c20411460b023470ab4d9a940462 176 PRINTS PR00446 Hydrogen uptake protein signature 56 66 7.4E-24 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CVS42_RS10680 2128c20411460b023470ab4d9a940462 176 PRINTS PR00446 Hydrogen uptake protein signature 15 26 7.4E-24 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CVS42_RS10680 2128c20411460b023470ab4d9a940462 176 PRINTS PR00446 Hydrogen uptake protein signature 67 83 7.4E-24 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CVS42_RS10680 2128c20411460b023470ab4d9a940462 176 Pfam PF01750 Hydrogenase maturation protease 20 145 5.1E-34 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CVS42_RS04610 443f5d35e9a3c0d65bfaa8891579fd2e 217 SUPERFAMILY SSF48613 1 211 7.37E-64 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CVS42_RS04610 443f5d35e9a3c0d65bfaa8891579fd2e 217 SMART SM01236 73 170 4.9E-9 T 29-03-2018 CVS42_RS04610 443f5d35e9a3c0d65bfaa8891579fd2e 217 Pfam PF14518 Iron-containing redox enzyme 39 206 3.3E-25 T 29-03-2018 IPR028201 PqqC-like protein CVS42_RS04610 443f5d35e9a3c0d65bfaa8891579fd2e 217 Gene3D G3DSA:1.20.910.10 1 216 6.9E-38 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CVS42_RS01045 e5f2b0672125ead892029bac44d8c36d 769 SUPERFAMILY SSF53098 318 466 9.1E-52 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS01045 e5f2b0672125ead892029bac44d8c36d 769 Gene3D G3DSA:2.40.50.140 649 748 9.2E-27 T 29-03-2018 CVS42_RS01045 e5f2b0672125ead892029bac44d8c36d 769 Gene3D G3DSA:1.10.10.650 2 101 5.8E-34 T 29-03-2018 IPR023319 Tex-like protein, HTH domain CVS42_RS01045 e5f2b0672125ead892029bac44d8c36d 769 Pfam PF09371 Tex-like protein N-terminal domain 9 192 2.3E-68 T 29-03-2018 IPR018974 Tex-like protein, N-terminal CVS42_RS01045 e5f2b0672125ead892029bac44d8c36d 769 Gene3D G3DSA:1.10.3500.10 102 349 2.1E-78 T 29-03-2018 IPR023323 Tex-like domain CVS42_RS01045 e5f2b0672125ead892029bac44d8c36d 769 Pfam PF12836 Helix-hairpin-helix motif 488 552 1.6E-30 T 29-03-2018 CVS42_RS01045 e5f2b0672125ead892029bac44d8c36d 769 SUPERFAMILY SSF47781 467 555 2.89E-29 T 29-03-2018 IPR010994 RuvA domain 2-like CVS42_RS01045 e5f2b0672125ead892029bac44d8c36d 769 Pfam PF00575 S1 RNA binding domain 647 717 8.7E-22 T 29-03-2018 IPR003029 S1 domain GO:0003676 CVS42_RS01045 e5f2b0672125ead892029bac44d8c36d 769 SUPERFAMILY SSF50249 635 720 1.79E-24 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS01045 e5f2b0672125ead892029bac44d8c36d 769 Pfam PF16921 Tex protein YqgF-like domain 323 448 2.7E-53 T 29-03-2018 IPR032639 Tex protein, YqgF-like domain CVS42_RS01045 e5f2b0672125ead892029bac44d8c36d 769 Gene3D G3DSA:1.10.150.310 496 627 6.7E-46 T 29-03-2018 CVS42_RS01045 e5f2b0672125ead892029bac44d8c36d 769 SUPERFAMILY SSF158832 1 317 4.45E-120 T 29-03-2018 CVS42_RS01045 e5f2b0672125ead892029bac44d8c36d 769 SMART SM00732 322 421 6.7E-34 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CVS42_RS01045 e5f2b0672125ead892029bac44d8c36d 769 SUPERFAMILY SSF47781 557 629 1.96E-20 T 29-03-2018 IPR010994 RuvA domain 2-like CVS42_RS01045 e5f2b0672125ead892029bac44d8c36d 769 Gene3D G3DSA:1.10.3500.10 350 495 2.2E-39 T 29-03-2018 IPR023323 Tex-like domain CVS42_RS01045 e5f2b0672125ead892029bac44d8c36d 769 SMART SM00316 646 717 6.3E-24 T 29-03-2018 IPR022967 RNA-binding domain, S1 CVS42_RS20960 23cdc6aea77d95f6f5ba5635050e67b6 181 SUPERFAMILY SSF55252 108 172 3.92E-15 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CVS42_RS20960 23cdc6aea77d95f6f5ba5635050e67b6 181 Hamap MF_00173 Arginine repressor [argR]. 34 180 36.521 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CVS42_RS20960 23cdc6aea77d95f6f5ba5635050e67b6 181 Pfam PF02863 Arginine repressor, C-terminal domain 109 167 1.6E-16 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CVS42_RS20960 23cdc6aea77d95f6f5ba5635050e67b6 181 Gene3D G3DSA:3.30.1360.40 104 177 3.7E-19 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CVS42_RS20960 23cdc6aea77d95f6f5ba5635050e67b6 181 SUPERFAMILY SSF46785 34 98 5.8E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20960 23cdc6aea77d95f6f5ba5635050e67b6 181 Gene3D G3DSA:1.10.10.10 34 94 7.7E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20960 23cdc6aea77d95f6f5ba5635050e67b6 181 Pfam PF01316 Arginine repressor, DNA binding domain 39 98 1.8E-14 T 29-03-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 CVS42_RS20960 23cdc6aea77d95f6f5ba5635050e67b6 181 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 115 175 3.0E-7 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CVS42_RS20960 23cdc6aea77d95f6f5ba5635050e67b6 181 PRINTS PR01467 Bacterial arginine repressor signature 146 161 4.8E-16 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CVS42_RS20960 23cdc6aea77d95f6f5ba5635050e67b6 181 PRINTS PR01467 Bacterial arginine repressor signature 67 82 4.8E-16 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CVS42_RS20960 23cdc6aea77d95f6f5ba5635050e67b6 181 PRINTS PR01467 Bacterial arginine repressor signature 50 63 4.8E-16 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CVS42_RS20960 23cdc6aea77d95f6f5ba5635050e67b6 181 PRINTS PR01467 Bacterial arginine repressor signature 116 129 4.8E-16 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CVS42_RS10230 febcfc72bdea9477134f5b748e300a70 202 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 185 4.3E-47 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CVS42_RS10230 febcfc72bdea9477134f5b748e300a70 202 Gene3D G3DSA:3.40.50.1240 1 196 8.8E-47 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CVS42_RS10230 febcfc72bdea9477134f5b748e300a70 202 SMART SM00855 2 158 3.3E-18 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CVS42_RS10230 febcfc72bdea9477134f5b748e300a70 202 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 29-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CVS42_RS10230 febcfc72bdea9477134f5b748e300a70 202 SUPERFAMILY SSF53254 1 186 9.85E-50 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CVS42_RS10230 febcfc72bdea9477134f5b748e300a70 202 PIRSF PIRSF000709 2 164 4.5E-12 T 29-03-2018 CVS42_RS04850 445b5c658abc0527f55bbedb72baa7ab 454 SUPERFAMILY SSF103473 235 447 1.57E-63 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS04850 445b5c658abc0527f55bbedb72baa7ab 454 SUPERFAMILY SSF103473 7 194 1.57E-63 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS04850 445b5c658abc0527f55bbedb72baa7ab 454 Gene3D G3DSA:1.20.1250.20 238 451 2.8E-27 T 29-03-2018 CVS42_RS04850 445b5c658abc0527f55bbedb72baa7ab 454 Gene3D G3DSA:1.20.1250.20 2 189 1.8E-28 T 29-03-2018 CVS42_RS04850 445b5c658abc0527f55bbedb72baa7ab 454 Pfam PF07690 Major Facilitator Superfamily 11 390 5.7E-51 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS11550 7bfa73944edb2dcf9f2012e00f180242 467 SMART SM00490 257 338 3.0E-32 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS11550 7bfa73944edb2dcf9f2012e00f180242 467 Gene3D G3DSA:3.40.50.300 7 221 4.7E-62 T 29-03-2018 CVS42_RS11550 7bfa73944edb2dcf9f2012e00f180242 467 Gene3D G3DSA:3.40.50.300 222 464 1.2E-44 T 29-03-2018 CVS42_RS11550 7bfa73944edb2dcf9f2012e00f180242 467 SMART SM00487 20 221 8.1E-65 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS11550 7bfa73944edb2dcf9f2012e00f180242 467 Pfam PF00271 Helicase conserved C-terminal domain 239 338 1.1E-26 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS11550 7bfa73944edb2dcf9f2012e00f180242 467 Pfam PF00270 DEAD/DEAH box helicase 25 194 1.3E-50 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CVS42_RS11550 7bfa73944edb2dcf9f2012e00f180242 467 SUPERFAMILY SSF52540 73 358 2.04E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11550 7bfa73944edb2dcf9f2012e00f180242 467 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CVS42_RS09270 1bb66d02cc247db031d58d044ac571af 405 Pfam PF07687 Peptidase dimerisation domain 183 282 4.7E-17 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CVS42_RS09270 1bb66d02cc247db031d58d044ac571af 405 Pfam PF01546 Peptidase family M20/M25/M40 78 393 2.9E-24 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CVS42_RS09270 1bb66d02cc247db031d58d044ac571af 405 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CVS42_RS09270 1bb66d02cc247db031d58d044ac571af 405 TIGRFAM TIGR03526 selenium_YgeY: putative selenium metabolism hydrolase 7 400 1.1E-227 T 29-03-2018 IPR017706 Peptidase M20/DapE, YgeY CVS42_RS09270 1bb66d02cc247db031d58d044ac571af 405 SUPERFAMILY SSF55031 186 287 1.32E-13 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CVS42_RS09270 1bb66d02cc247db031d58d044ac571af 405 Gene3D G3DSA:3.40.630.10 7 286 1.1E-47 T 29-03-2018 CVS42_RS09270 1bb66d02cc247db031d58d044ac571af 405 SUPERFAMILY SSF53187 316 395 5.28E-53 T 29-03-2018 CVS42_RS09270 1bb66d02cc247db031d58d044ac571af 405 SUPERFAMILY SSF53187 11 185 5.28E-53 T 29-03-2018 CVS42_RS05495 f6396e0a98fecd3036f4bb1be3a4b8d5 356 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 249 318 2.3E-20 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CVS42_RS05495 f6396e0a98fecd3036f4bb1be3a4b8d5 356 SUPERFAMILY SSF103039 53 229 4.71E-19 T 29-03-2018 IPR028976 CheC-like domain CVS42_RS05495 f6396e0a98fecd3036f4bb1be3a4b8d5 356 SUPERFAMILY SSF103039 4 13 4.71E-19 T 29-03-2018 IPR028976 CheC-like domain CVS42_RS05495 f6396e0a98fecd3036f4bb1be3a4b8d5 356 Gene3D G3DSA:3.40.1550.10 44 233 9.6E-41 T 29-03-2018 IPR028976 CheC-like domain CVS42_RS05495 f6396e0a98fecd3036f4bb1be3a4b8d5 356 Pfam PF02154 Flagellar motor switch protein FliM 36 228 4.0E-79 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CVS42_RS05495 f6396e0a98fecd3036f4bb1be3a4b8d5 356 SUPERFAMILY SSF101801 246 323 4.71E-17 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CVS42_RS05495 f6396e0a98fecd3036f4bb1be3a4b8d5 356 PRINTS PR00955 Flagellar motor switch protein FliM signature 87 103 2.7E-19 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CVS42_RS05495 f6396e0a98fecd3036f4bb1be3a4b8d5 356 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 2.7E-19 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CVS42_RS05495 f6396e0a98fecd3036f4bb1be3a4b8d5 356 PRINTS PR00955 Flagellar motor switch protein FliM signature 112 131 2.7E-19 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CVS42_RS05495 f6396e0a98fecd3036f4bb1be3a4b8d5 356 PRINTS PR00955 Flagellar motor switch protein FliM signature 210 228 2.7E-19 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CVS42_RS05495 f6396e0a98fecd3036f4bb1be3a4b8d5 356 Gene3D G3DSA:2.30.330.10 236 329 2.1E-19 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CVS42_RS05495 f6396e0a98fecd3036f4bb1be3a4b8d5 356 PIRSF PIRSF002888 1 328 1.1E-95 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CVS42_RS05495 f6396e0a98fecd3036f4bb1be3a4b8d5 356 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 318 1.7E-114 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CVS42_RS11475 940373d21e8fea57921bd858bf73373b 928 SUPERFAMILY SSF63411 235 471 2.04E-75 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CVS42_RS11475 940373d21e8fea57921bd858bf73373b 928 Pfam PF00675 Insulinase (Peptidase family M16) 23 160 1.1E-34 T 29-03-2018 IPR011765 Peptidase M16, N-terminal CVS42_RS11475 940373d21e8fea57921bd858bf73373b 928 Gene3D G3DSA:3.30.830.10 701 927 1.0E-32 T 29-03-2018 CVS42_RS11475 940373d21e8fea57921bd858bf73373b 928 SUPERFAMILY SSF63411 472 690 4.54E-51 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CVS42_RS11475 940373d21e8fea57921bd858bf73373b 928 SUPERFAMILY SSF63411 708 903 1.08E-41 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CVS42_RS11475 940373d21e8fea57921bd858bf73373b 928 Pfam PF16187 Middle or third domain of peptidase_M16 368 645 1.1E-80 T 29-03-2018 IPR032632 Peptidase M16, middle/third domain CVS42_RS11475 940373d21e8fea57921bd858bf73373b 928 SUPERFAMILY SSF63411 2 231 5.32E-59 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CVS42_RS11475 940373d21e8fea57921bd858bf73373b 928 Pfam PF05193 Peptidase M16 inactive domain 184 359 7.0E-15 T 29-03-2018 IPR007863 Peptidase M16, C-terminal CVS42_RS11475 940373d21e8fea57921bd858bf73373b 928 Pfam PF05193 Peptidase M16 inactive domain 651 828 3.2E-9 T 29-03-2018 IPR007863 Peptidase M16, C-terminal CVS42_RS11475 940373d21e8fea57921bd858bf73373b 928 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 44 67 - T 29-03-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CVS42_RS11475 940373d21e8fea57921bd858bf73373b 928 Gene3D G3DSA:3.30.830.10 2 229 7.2E-77 T 29-03-2018 CVS42_RS11475 940373d21e8fea57921bd858bf73373b 928 Gene3D G3DSA:3.30.830.10 241 470 1.7E-70 T 29-03-2018 CVS42_RS11475 940373d21e8fea57921bd858bf73373b 928 Gene3D G3DSA:3.30.830.10 471 700 1.2E-22 T 29-03-2018 CVS42_RS14385 c4e31cf47f9d93f267158f4ec9791955 353 Pfam PF13439 Glycosyltransferase Family 4 1 157 2.2E-21 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CVS42_RS14385 c4e31cf47f9d93f267158f4ec9791955 353 Pfam PF00534 Glycosyl transferases group 1 165 329 3.3E-37 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CVS42_RS14385 c4e31cf47f9d93f267158f4ec9791955 353 Gene3D G3DSA:3.40.50.2000 1 166 4.5E-21 T 29-03-2018 CVS42_RS14385 c4e31cf47f9d93f267158f4ec9791955 353 Gene3D G3DSA:3.40.50.2000 167 336 5.7E-45 T 29-03-2018 CVS42_RS14385 c4e31cf47f9d93f267158f4ec9791955 353 SUPERFAMILY SSF53756 1 351 1.5E-83 T 29-03-2018 CVS42_RS17310 b53844b66766fb6e2a1b41ceba21fffc 347 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 1.2E-172 T 29-03-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 CVS42_RS17310 b53844b66766fb6e2a1b41ceba21fffc 347 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS17310 b53844b66766fb6e2a1b41ceba21fffc 347 SMART SM00382 30 224 3.9E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS17310 b53844b66766fb6e2a1b41ceba21fffc 347 SMART SM00930 265 340 7.0E-26 T 29-03-2018 IPR018449 NIL domain CVS42_RS17310 b53844b66766fb6e2a1b41ceba21fffc 347 Pfam PF09383 NIL domain 268 339 6.7E-17 T 29-03-2018 IPR018449 NIL domain CVS42_RS17310 b53844b66766fb6e2a1b41ceba21fffc 347 Gene3D G3DSA:3.40.50.300 1 253 1.8E-73 T 29-03-2018 CVS42_RS17310 b53844b66766fb6e2a1b41ceba21fffc 347 SUPERFAMILY SSF52540 1 239 2.54E-82 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS17310 b53844b66766fb6e2a1b41ceba21fffc 347 SUPERFAMILY SSF55021 248 343 8.7E-24 T 29-03-2018 CVS42_RS17310 b53844b66766fb6e2a1b41ceba21fffc 347 Pfam PF00005 ABC transporter 21 169 1.7E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS17310 b53844b66766fb6e2a1b41ceba21fffc 347 Gene3D G3DSA:3.30.70.260 254 344 8.4E-23 T 29-03-2018 CVS42_RS11670 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 465 6.0E-162 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CVS42_RS11670 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 SUPERFAMILY SSF53271 252 484 2.1E-71 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CVS42_RS11670 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 Pfam PF13522 Glutamine amidotransferase domain 64 201 4.4E-16 T 29-03-2018 CVS42_RS11670 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 Pfam PF00156 Phosphoribosyl transferase domain 280 393 1.6E-8 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CVS42_RS11670 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 Gene3D G3DSA:3.40.50.2020 276 445 5.4E-36 T 29-03-2018 CVS42_RS11670 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 PIRSF PIRSF000485 1 482 9.4E-167 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CVS42_RS11670 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 SUPERFAMILY SSF56235 2 258 4.46E-73 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS11670 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 465 44.994 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CVS42_RS11670 b3fd3e3324ff3a99f4270f8b7e9ee5a9 506 Gene3D G3DSA:3.60.20.10 2 258 1.5E-54 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS16965 82e6d0a6d1473c317d1ba4da4157ae02 352 SUPERFAMILY SSF52540 58 346 1.47E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS16965 82e6d0a6d1473c317d1ba4da4157ae02 352 ProSitePatterns PS00211 ABC transporters family signature. 182 196 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS16965 82e6d0a6d1473c317d1ba4da4157ae02 352 SMART SM00382 58 259 1.2E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS16965 82e6d0a6d1473c317d1ba4da4157ae02 352 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 261 326 2.8E-21 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CVS42_RS16965 82e6d0a6d1473c317d1ba4da4157ae02 352 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 260 346 8.3E-28 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CVS42_RS16965 82e6d0a6d1473c317d1ba4da4157ae02 352 Gene3D G3DSA:3.40.50.300 26 351 8.0E-83 T 29-03-2018 CVS42_RS16965 82e6d0a6d1473c317d1ba4da4157ae02 352 Pfam PF00005 ABC transporter 49 209 2.6E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS13880 6b2eaeaf039b48a1e684e9f4f4fb7df5 549 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 491 536 1.1E-7 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS13880 6b2eaeaf039b48a1e684e9f4f4fb7df5 549 SUPERFAMILY SSF53738 306 448 1.22E-31 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS13880 6b2eaeaf039b48a1e684e9f4f4fb7df5 549 SUPERFAMILY SSF53738 210 318 4.12E-10 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS13880 6b2eaeaf039b48a1e684e9f4f4fb7df5 549 Gene3D G3DSA:3.40.120.10 214 326 2.9E-24 T 29-03-2018 CVS42_RS13880 6b2eaeaf039b48a1e684e9f4f4fb7df5 549 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 3.3E-285 T 29-03-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 CVS42_RS13880 6b2eaeaf039b48a1e684e9f4f4fb7df5 549 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 141 150 - T 29-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS13880 6b2eaeaf039b48a1e684e9f4f4fb7df5 549 Gene3D G3DSA:3.30.310.50 444 547 2.9E-18 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS13880 6b2eaeaf039b48a1e684e9f4f4fb7df5 549 SUPERFAMILY SSF55957 434 544 1.83E-19 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS13880 6b2eaeaf039b48a1e684e9f4f4fb7df5 549 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 182 8.8E-37 T 29-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS13880 6b2eaeaf039b48a1e684e9f4f4fb7df5 549 Gene3D G3DSA:3.40.120.10 327 441 1.8E-25 T 29-03-2018 CVS42_RS13880 6b2eaeaf039b48a1e684e9f4f4fb7df5 549 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 321 438 1.9E-27 T 29-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS13880 6b2eaeaf039b48a1e684e9f4f4fb7df5 549 Gene3D G3DSA:3.40.120.10 13 213 4.7E-49 T 29-03-2018 CVS42_RS13880 6b2eaeaf039b48a1e684e9f4f4fb7df5 549 SUPERFAMILY SSF53738 26 236 2.55E-49 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS13880 6b2eaeaf039b48a1e684e9f4f4fb7df5 549 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 211 318 1.8E-17 T 29-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CVS42_RS13215 aa4d3c630b475d84d11b388879258d12 468 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 357 377 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CVS42_RS13215 aa4d3c630b475d84d11b388879258d12 468 Pfam PF00860 Permease family 28 407 4.7E-108 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CVS42_RS13215 aa4d3c630b475d84d11b388879258d12 468 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 26 440 4.3E-121 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CVS42_RS13215 aa4d3c630b475d84d11b388879258d12 468 TIGRFAM TIGR03173 pbuX: xanthine permease 33 443 2.1E-153 T 29-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 SUPERFAMILY SSF51395 44 140 2.2E-15 T 29-03-2018 CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 SUPERFAMILY SSF51395 289 396 2.2E-15 T 29-03-2018 CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 SUPERFAMILY SSF51395 204 259 2.2E-15 T 29-03-2018 CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 SUPERFAMILY SSF51971 553 788 9.42E-44 T 29-03-2018 CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 456 533 3.6E-16 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 Gene3D G3DSA:3.50.50.60 697 858 4.7E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 PRINTS PR00419 Adrenodoxin reductase family signature 554 576 5.6E-16 T 29-03-2018 CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 PRINTS PR00419 Adrenodoxin reductase family signature 577 590 5.6E-16 T 29-03-2018 CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 PRINTS PR00419 Adrenodoxin reductase family signature 683 697 5.6E-16 T 29-03-2018 CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 SUPERFAMILY SSF46548 426 563 5.75E-19 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 941 952 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 Gene3D G3DSA:3.20.20.70 43 409 4.5E-15 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 Gene3D G3DSA:1.10.1060.10 415 552 2.5E-23 T 29-03-2018 CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 Gene3D G3DSA:1.10.1060.10 859 967 4.8E-10 T 29-03-2018 CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 Gene3D G3DSA:3.50.50.60 553 636 3.5E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 554 841 2.1E-35 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 Gene3D G3DSA:3.50.50.60 637 696 8.7E-12 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 TIGRFAM TIGR03315 Se_ygfK: putative selenate reductase, YgfK subunit 2 1031 0.0 T 29-03-2018 IPR017701 Putative selenate reductase YgfK CVS42_RS09305 214b51236111a56ce1974f3c82ef7a2d 1036 SUPERFAMILY SSF46548 886 968 5.13E-9 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CVS42_RS11880 b2f42f30e27fd025675a9db0946f01f1 388 Pfam PF13176 Tetratricopeptide repeat 71 97 0.028 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS11880 b2f42f30e27fd025675a9db0946f01f1 388 Gene3D G3DSA:1.25.40.10 21 84 1.1E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS11880 b2f42f30e27fd025675a9db0946f01f1 388 Gene3D G3DSA:1.25.40.10 85 176 5.2E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS11880 b2f42f30e27fd025675a9db0946f01f1 388 SMART SM00028 69 102 43.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS11880 b2f42f30e27fd025675a9db0946f01f1 388 SMART SM00028 179 212 14.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS11880 b2f42f30e27fd025675a9db0946f01f1 388 SMART SM00028 213 246 21.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS11880 b2f42f30e27fd025675a9db0946f01f1 388 SMART SM00028 35 68 190.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS11880 b2f42f30e27fd025675a9db0946f01f1 388 SUPERFAMILY SSF48452 35 277 5.88E-18 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS11880 b2f42f30e27fd025675a9db0946f01f1 388 Gene3D G3DSA:1.25.40.10 178 223 2.2E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS11880 b2f42f30e27fd025675a9db0946f01f1 388 Gene3D G3DSA:1.25.40.10 224 351 1.4E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS11880 b2f42f30e27fd025675a9db0946f01f1 388 Pfam PF14559 Tetratricopeptide repeat 190 245 8.3E-7 T 29-03-2018 CVS42_RS11880 b2f42f30e27fd025675a9db0946f01f1 388 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 386 36.332 T 29-03-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 CVS42_RS08690 25ae4bdca7b21d758adcffec86e72f85 317 Pfam PF03916 Polysulphide reductase, NrfD 5 316 1.0E-87 T 29-03-2018 IPR005614 NrfD family CVS42_RS08690 25ae4bdca7b21d758adcffec86e72f85 317 Gene3D G3DSA:1.20.1630.10 7 317 1.3E-58 T 29-03-2018 CVS42_RS08690 25ae4bdca7b21d758adcffec86e72f85 317 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 5 317 4.7E-137 T 29-03-2018 IPR017566 NrfD CVS42_RS07590 5e9d48bebcbcb44bfd443cd90e117f69 290 Pfam PF01136 Peptidase family U32 85 195 1.6E-11 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CVS42_RS02255 893f8f224160500220014a4dc05519fc 247 ProSitePatterns PS00194 Thioredoxin family active site. 99 117 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CVS42_RS02255 893f8f224160500220014a4dc05519fc 247 Pfam PF13462 Thioredoxin 85 240 1.8E-21 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS02255 893f8f224160500220014a4dc05519fc 247 SUPERFAMILY SSF52833 76 240 1.07E-37 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS02255 893f8f224160500220014a4dc05519fc 247 Gene3D G3DSA:3.40.30.10 76 247 6.5E-34 T 29-03-2018 CVS42_RS09980 26eac5a08af464e6a37d3c5361a4704c 657 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 455 466 4.1E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS09980 26eac5a08af464e6a37d3c5361a4704c 657 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 504 520 4.1E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS09980 26eac5a08af464e6a37d3c5361a4704c 657 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 530 549 4.1E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS09980 26eac5a08af464e6a37d3c5361a4704c 657 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 381 398 4.1E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS09980 26eac5a08af464e6a37d3c5361a4704c 657 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 530 549 2.7E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS09980 26eac5a08af464e6a37d3c5361a4704c 657 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 510 518 2.7E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS09980 26eac5a08af464e6a37d3c5361a4704c 657 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 455 466 2.7E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS09980 26eac5a08af464e6a37d3c5361a4704c 657 Pfam PF07993 Male sterility protein 5 236 8.9E-45 T 29-03-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 CVS42_RS09980 26eac5a08af464e6a37d3c5361a4704c 657 Gene3D G3DSA:3.40.50.720 365 635 1.9E-57 T 29-03-2018 CVS42_RS09980 26eac5a08af464e6a37d3c5361a4704c 657 SUPERFAMILY SSF51735 376 597 1.99E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS09980 26eac5a08af464e6a37d3c5361a4704c 657 Gene3D G3DSA:3.40.50.720 1 344 9.5E-34 T 29-03-2018 CVS42_RS09980 26eac5a08af464e6a37d3c5361a4704c 657 SUPERFAMILY SSF51735 1 307 1.22E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS09980 26eac5a08af464e6a37d3c5361a4704c 657 Pfam PF00106 short chain dehydrogenase 380 570 4.5E-49 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS09980 26eac5a08af464e6a37d3c5361a4704c 657 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 517 545 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CVS42_RS09980 26eac5a08af464e6a37d3c5361a4704c 657 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 380 566 1.5E-4 T 29-03-2018 CVS42_RS06920 b9e7dde213ba4f129969a07275cb55b0 394 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 176 204 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CVS42_RS06920 b9e7dde213ba4f129969a07275cb55b0 394 Gene3D G3DSA:3.40.50.1970 10 186 5.8E-44 T 29-03-2018 CVS42_RS06920 b9e7dde213ba4f129969a07275cb55b0 394 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 384 1.3E-102 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CVS42_RS06920 b9e7dde213ba4f129969a07275cb55b0 394 Gene3D G3DSA:1.20.1090.10 187 394 6.4E-52 T 29-03-2018 CVS42_RS06920 b9e7dde213ba4f129969a07275cb55b0 394 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 263 283 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CVS42_RS06920 b9e7dde213ba4f129969a07275cb55b0 394 SUPERFAMILY SSF56796 4 393 2.88E-104 T 29-03-2018 CVS42_RS00055 738c7100d6cd0205043f1b963ef12cb3 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 366 6.1E-41 T 29-03-2018 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS00055 738c7100d6cd0205043f1b963ef12cb3 367 SUPERFAMILY SSF55979 246 367 3.14E-38 T 29-03-2018 CVS42_RS00055 738c7100d6cd0205043f1b963ef12cb3 367 SMART SM00480 17 363 3.6E-145 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS00055 738c7100d6cd0205043f1b963ef12cb3 367 Gene3D G3DSA:3.10.150.10 125 248 1.2E-30 T 29-03-2018 CVS42_RS00055 738c7100d6cd0205043f1b963ef12cb3 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 2.1E-35 T 29-03-2018 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS00055 738c7100d6cd0205043f1b963ef12cb3 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 2.6E-107 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS00055 738c7100d6cd0205043f1b963ef12cb3 367 SUPERFAMILY SSF55979 127 245 4.28E-27 T 29-03-2018 CVS42_RS00055 738c7100d6cd0205043f1b963ef12cb3 367 PIRSF PIRSF000804 1 367 1.3E-113 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS00055 738c7100d6cd0205043f1b963ef12cb3 367 Gene3D G3DSA:3.10.150.10 1 120 1.4E-27 T 29-03-2018 CVS42_RS00055 738c7100d6cd0205043f1b963ef12cb3 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 244 4.0E-34 T 29-03-2018 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS00055 738c7100d6cd0205043f1b963ef12cb3 367 SUPERFAMILY SSF55979 1 118 4.83E-28 T 29-03-2018 CVS42_RS00055 738c7100d6cd0205043f1b963ef12cb3 367 Gene3D G3DSA:3.10.150.10 249 367 1.8E-25 T 29-03-2018 CVS42_RS01275 a05d235da2ece52879031ecdbca90edf 228 Gene3D G3DSA:2.60.120.10 12 133 5.8E-44 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS01275 a05d235da2ece52879031ecdbca90edf 228 Pfam PF02678 Pirin 8 119 1.1E-32 T 29-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CVS42_RS01275 a05d235da2ece52879031ecdbca90edf 228 PIRSF PIRSF006232 1 226 3.3E-51 T 29-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CVS42_RS01275 a05d235da2ece52879031ecdbca90edf 228 Gene3D G3DSA:2.60.120.10 134 228 6.5E-20 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS01275 a05d235da2ece52879031ecdbca90edf 228 SUPERFAMILY SSF51182 1 227 2.39E-71 T 29-03-2018 IPR011051 RmlC-like cupin domain CVS42_RS14720 981fb23ad20ad5833a3c94971b3b5f84 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 7.1E-97 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CVS42_RS14720 981fb23ad20ad5833a3c94971b3b5f84 268 SUPERFAMILY SSF51366 1 266 2.26E-88 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CVS42_RS14720 981fb23ad20ad5833a3c94971b3b5f84 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 29-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CVS42_RS14720 981fb23ad20ad5833a3c94971b3b5f84 268 Gene3D G3DSA:3.20.20.70 2 268 2.6E-67 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS14720 981fb23ad20ad5833a3c94971b3b5f84 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 9.4E-90 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CVS42_RS14720 981fb23ad20ad5833a3c94971b3b5f84 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 36.584 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CVS42_RS10200 52b3a04b767139546f39b0d0cc6ad2b5 466 SMART SM00490 258 339 3.7E-29 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS10200 52b3a04b767139546f39b0d0cc6ad2b5 466 SUPERFAMILY SSF52540 74 360 4.91E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS10200 52b3a04b767139546f39b0d0cc6ad2b5 466 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 462 49.996 T 29-03-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 CVS42_RS10200 52b3a04b767139546f39b0d0cc6ad2b5 466 Pfam PF00271 Helicase conserved C-terminal domain 231 339 4.0E-26 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS10200 52b3a04b767139546f39b0d0cc6ad2b5 466 Pfam PF00270 DEAD/DEAH box helicase 26 195 2.2E-46 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CVS42_RS10200 52b3a04b767139546f39b0d0cc6ad2b5 466 Gene3D G3DSA:3.40.50.300 223 452 4.9E-44 T 29-03-2018 CVS42_RS10200 52b3a04b767139546f39b0d0cc6ad2b5 466 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CVS42_RS10200 52b3a04b767139546f39b0d0cc6ad2b5 466 Gene3D G3DSA:3.40.50.300 9 222 1.0E-56 T 29-03-2018 CVS42_RS10200 52b3a04b767139546f39b0d0cc6ad2b5 466 SMART SM00487 20 222 1.9E-60 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS10605 48e2a2128317fff6a840555e9a857e07 163 SUPERFAMILY SSF53163 5 140 6.02E-33 T 29-03-2018 IPR023430 Peptidase HybD-like domain CVS42_RS10605 48e2a2128317fff6a840555e9a857e07 163 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 140 2.2E-35 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CVS42_RS10605 48e2a2128317fff6a840555e9a857e07 163 Pfam PF01750 Hydrogenase maturation protease 23 138 3.7E-18 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CVS42_RS10605 48e2a2128317fff6a840555e9a857e07 163 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 5 145 3.1E-45 T 29-03-2018 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 CVS42_RS10605 48e2a2128317fff6a840555e9a857e07 163 PRINTS PR00446 Hydrogen uptake protein signature 68 84 1.2E-8 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CVS42_RS10605 48e2a2128317fff6a840555e9a857e07 163 PRINTS PR00446 Hydrogen uptake protein signature 57 67 1.2E-8 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CVS42_RS10605 48e2a2128317fff6a840555e9a857e07 163 PRINTS PR00446 Hydrogen uptake protein signature 34 51 1.2E-8 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CVS42_RS10605 48e2a2128317fff6a840555e9a857e07 163 PRINTS PR00446 Hydrogen uptake protein signature 16 27 1.2E-8 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CVS42_RS10605 48e2a2128317fff6a840555e9a857e07 163 PRINTS PR00446 Hydrogen uptake protein signature 4 16 1.2E-8 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CVS42_RS10605 48e2a2128317fff6a840555e9a857e07 163 Gene3D G3DSA:3.40.50.1450 3 154 1.1E-34 T 29-03-2018 IPR023430 Peptidase HybD-like domain CVS42_RS13780 ba6cca68dbc235d8901a603d98617d8f 834 Gene3D G3DSA:3.20.20.450 562 814 6.2E-101 T 29-03-2018 IPR001633 EAL domain CVS42_RS13780 ba6cca68dbc235d8901a603d98617d8f 834 SUPERFAMILY SSF55073 393 555 9.42E-49 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS13780 ba6cca68dbc235d8901a603d98617d8f 834 SMART SM00267 377 554 5.8E-64 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS13780 ba6cca68dbc235d8901a603d98617d8f 834 Gene3D G3DSA:3.30.450.40 112 269 1.5E-9 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS13780 ba6cca68dbc235d8901a603d98617d8f 834 Gene3D G3DSA:3.30.70.270 404 561 1.9E-60 T 29-03-2018 CVS42_RS13780 ba6cca68dbc235d8901a603d98617d8f 834 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 385 551 1.1E-42 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS13780 ba6cca68dbc235d8901a603d98617d8f 834 Pfam PF13426 PAS domain 279 376 5.2E-11 T 29-03-2018 IPR000014 PAS domain CVS42_RS13780 ba6cca68dbc235d8901a603d98617d8f 834 Pfam PF00990 Diguanylate cyclase, GGDEF domain 388 549 2.9E-48 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS13780 ba6cca68dbc235d8901a603d98617d8f 834 SUPERFAMILY SSF55781 137 269 4.71E-7 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS13780 ba6cca68dbc235d8901a603d98617d8f 834 SUPERFAMILY SSF55785 279 385 4.19E-19 T 29-03-2018 IPR000014 PAS domain CVS42_RS13780 ba6cca68dbc235d8901a603d98617d8f 834 Pfam PF00563 EAL domain 570 805 2.0E-73 T 29-03-2018 IPR001633 EAL domain CVS42_RS13780 ba6cca68dbc235d8901a603d98617d8f 834 Gene3D G3DSA:3.30.450.20 270 403 1.1E-23 T 29-03-2018 CVS42_RS13780 ba6cca68dbc235d8901a603d98617d8f 834 SMART SM00052 564 810 1.9E-113 T 29-03-2018 IPR001633 EAL domain CVS42_RS13780 ba6cca68dbc235d8901a603d98617d8f 834 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 269 383 4.1E-13 T 29-03-2018 IPR000014 PAS domain CVS42_RS13780 ba6cca68dbc235d8901a603d98617d8f 834 SUPERFAMILY SSF141868 570 820 1.29E-88 T 29-03-2018 IPR001633 EAL domain CVS42_RS13460 81096e541aae53c9fa109d7ba76dbf62 745 SUPERFAMILY SSF161098 514 731 6.8E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS13460 81096e541aae53c9fa109d7ba76dbf62 745 SUPERFAMILY SSF50978 231 404 1.25E-8 T 29-03-2018 IPR017986 WD40-repeat-containing domain GO:0005515 CVS42_RS13460 81096e541aae53c9fa109d7ba76dbf62 745 SUPERFAMILY SSF161098 432 532 1.28E-6 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS13460 81096e541aae53c9fa109d7ba76dbf62 745 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 461 739 2.7E-9 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS13460 81096e541aae53c9fa109d7ba76dbf62 745 Gene3D G3DSA:1.10.3720.10 13 732 6.9E-51 T 29-03-2018 CVS42_RS20435 d6de64fff504cf932824f3760d67552f 280 Gene3D G3DSA:3.40.190.10 165 251 1.7E-18 T 29-03-2018 CVS42_RS20435 d6de64fff504cf932824f3760d67552f 280 SUPERFAMILY SSF53850 89 277 5.43E-29 T 29-03-2018 CVS42_RS20435 d6de64fff504cf932824f3760d67552f 280 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 57 7.1E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS20435 d6de64fff504cf932824f3760d67552f 280 SUPERFAMILY SSF46785 1 82 3.27E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20435 d6de64fff504cf932824f3760d67552f 280 Gene3D G3DSA:3.40.190.10 89 164 1.2E-10 T 29-03-2018 CVS42_RS20435 d6de64fff504cf932824f3760d67552f 280 Pfam PF03466 LysR substrate binding domain 88 271 2.0E-26 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS20435 d6de64fff504cf932824f3760d67552f 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.2E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS20435 d6de64fff504cf932824f3760d67552f 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.2E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS20435 d6de64fff504cf932824f3760d67552f 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.2E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS20435 d6de64fff504cf932824f3760d67552f 280 Gene3D G3DSA:1.10.10.10 1 88 9.7E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS01095 1b53e4d77391211c4c814f676c767017 92 PIRSF PIRSF002144 1 92 5.8E-32 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01095 1b53e4d77391211c4c814f676c767017 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 8.1E-25 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01095 1b53e4d77391211c4c814f676c767017 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 8.1E-25 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01095 1b53e4d77391211c4c814f676c767017 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 8.1E-25 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01095 1b53e4d77391211c4c814f676c767017 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 29-03-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01095 1b53e4d77391211c4c814f676c767017 92 SUPERFAMILY SSF54570 3 84 9.16E-36 T 29-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01095 1b53e4d77391211c4c814f676c767017 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.801 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01095 1b53e4d77391211c4c814f676c767017 92 Gene3D G3DSA:3.30.860.10 1 92 3.7E-41 T 29-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01095 1b53e4d77391211c4c814f676c767017 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.3E-46 T 29-03-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CVS42_RS01095 1b53e4d77391211c4c814f676c767017 92 Pfam PF00203 Ribosomal protein S19 3 83 5.9E-37 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS12555 ec0ef3d6c3a811fd1c1224931cc65839 223 Pfam PF02525 Flavodoxin-like fold 1 208 1.7E-56 T 29-03-2018 IPR003680 Flavodoxin-like fold CVS42_RS12555 ec0ef3d6c3a811fd1c1224931cc65839 223 Gene3D G3DSA:3.40.50.360 1 223 1.3E-52 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS12555 ec0ef3d6c3a811fd1c1224931cc65839 223 SUPERFAMILY SSF52218 1 215 4.89E-66 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS03805 e19bd55d7051fa2744dc6cd5dd940986 245 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 3.3E-101 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CVS42_RS03805 e19bd55d7051fa2744dc6cd5dd940986 245 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.6E-102 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CVS42_RS03805 e19bd55d7051fa2744dc6cd5dd940986 245 SUPERFAMILY SSF63892 4 242 6.28E-100 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CVS42_RS03805 e19bd55d7051fa2744dc6cd5dd940986 245 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 131.746 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CVS42_RS03805 e19bd55d7051fa2744dc6cd5dd940986 245 Gene3D G3DSA:3.20.20.70 4 238 3.3E-103 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS21240 c77c38f8b1088be451e16f53138e7398 613 SUPERFAMILY SSF143975 3 420 4.58E-137 T 29-03-2018 CVS42_RS21240 c77c38f8b1088be451e16f53138e7398 613 SUPERFAMILY SSF52016 421 608 3.53E-59 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CVS42_RS21240 c77c38f8b1088be451e16f53138e7398 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 9.0E-261 T 29-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CVS42_RS21240 c77c38f8b1088be451e16f53138e7398 613 Pfam PF00920 Dehydratase family 34 604 1.3E-219 T 29-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CVS42_RS21240 c77c38f8b1088be451e16f53138e7398 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CVS42_RS21240 c77c38f8b1088be451e16f53138e7398 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.24 T 29-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CVS42_RS21240 c77c38f8b1088be451e16f53138e7398 613 Gene3D G3DSA:3.40.50.2300 60 245 0.0023 T 29-03-2018 CVS42_RS21240 c77c38f8b1088be451e16f53138e7398 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 234 8.1E-81 T 29-03-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 237 63.151 T 29-03-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 SUPERFAMILY SSF88659 166 238 6.54E-20 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 Gene3D G3DSA:1.10.10.10 176 238 6.7E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 204 230 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 Gene3D G3DSA:1.10.1740.10 2 86 2.3E-20 T 29-03-2018 CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 PRINTS PR00046 Major sigma-70 factor signature 219 230 1.8E-12 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 PRINTS PR00046 Major sigma-70 factor signature 204 219 1.8E-12 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 PRINTS PR00046 Major sigma-70 factor signature 43 56 1.8E-12 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 PRINTS PR00046 Major sigma-70 factor signature 187 199 1.8E-12 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 Pfam PF04545 Sigma-70, region 4 185 232 1.2E-18 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 SUPERFAMILY SSF88946 15 88 7.72E-24 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 Pfam PF04539 Sigma-70 region 3 98 139 4.5E-8 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 234 2.8E-31 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 SUPERFAMILY SSF88659 89 154 3.92E-12 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 Pfam PF04542 Sigma-70 region 2 16 88 5.4E-18 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 PIRSF PIRSF000770 3 238 1.1E-33 T 29-03-2018 CVS42_RS05545 e86a0959ae29ca6ae4712b1034f40efa 239 Gene3D G3DSA:1.10.10.10 89 137 2.3E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS09470 524a18a5c0440d34e557294bf899e4c0 345 Gene3D G3DSA:3.30.1330.10 1 160 2.8E-37 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CVS42_RS09470 524a18a5c0440d34e557294bf899e4c0 345 Hamap MF_00625 Selenide, water dikinase [selD]. 3 344 45.206 T 29-03-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CVS42_RS09470 524a18a5c0440d34e557294bf899e4c0 345 SUPERFAMILY SSF55326 5 156 4.32E-41 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CVS42_RS09470 524a18a5c0440d34e557294bf899e4c0 345 SUPERFAMILY SSF56042 163 334 3.14E-55 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS09470 524a18a5c0440d34e557294bf899e4c0 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 167 336 1.4E-31 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS09470 524a18a5c0440d34e557294bf899e4c0 345 PIRSF PIRSF036407 1 343 3.5E-118 T 29-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CVS42_RS09470 524a18a5c0440d34e557294bf899e4c0 345 Gene3D G3DSA:3.90.650.10 162 344 4.8E-45 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS09470 524a18a5c0440d34e557294bf899e4c0 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 48 155 1.2E-18 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CVS42_RS09470 524a18a5c0440d34e557294bf899e4c0 345 TIGRFAM TIGR00476 selD: selenide, water dikinase 5 311 5.4E-138 T 29-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CVS42_RS07340 14fd26ffd423a654c407975977d1aace 467 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 2 465 36.776 T 29-03-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 CVS42_RS07340 14fd26ffd423a654c407975977d1aace 467 SUPERFAMILY SSF48452 292 434 1.12E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS07340 14fd26ffd423a654c407975977d1aace 467 Gene3D G3DSA:3.30.2010.10 45 115 1.7E-15 T 29-03-2018 CVS42_RS07340 14fd26ffd423a654c407975977d1aace 467 Gene3D G3DSA:1.25.40.10 348 370 0.004 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS07340 14fd26ffd423a654c407975977d1aace 467 Pfam PF01435 Peptidase family M48 54 239 1.7E-29 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CVS42_RS07340 14fd26ffd423a654c407975977d1aace 467 Gene3D G3DSA:1.25.40.10 371 466 3.7E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS07340 14fd26ffd423a654c407975977d1aace 467 Pfam PF14559 Tetratricopeptide repeat 335 399 2.1E-8 T 29-03-2018 CVS42_RS07340 14fd26ffd423a654c407975977d1aace 467 Gene3D G3DSA:1.25.40.10 116 347 3.6E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS09000 3248ec6c65d23a68ca15a6c0b18623c6 294 Pfam PF03547 Membrane transport protein 134 284 1.4E-11 T 29-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CVS42_RS20900 d0acd349670281af424be87877b9b144 494 SUPERFAMILY SSF52467 321 494 8.88E-78 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CVS42_RS20900 d0acd349670281af424be87877b9b144 494 PIRSF PIRSF000204 1 494 1.0E-230 T 29-03-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 CVS42_RS20900 d0acd349670281af424be87877b9b144 494 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 492 5.6E-200 T 29-03-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CVS42_RS20900 d0acd349670281af424be87877b9b144 494 Gene3D G3DSA:3.40.50.1220 321 494 1.1E-89 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CVS42_RS15570 13a47c3cf361d40d7be1e337080950f0 261 SUPERFAMILY SSF46689 210 258 5.38E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS15570 13a47c3cf361d40d7be1e337080950f0 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 3.8E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS15570 13a47c3cf361d40d7be1e337080950f0 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 3.8E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS15570 13a47c3cf361d40d7be1e337080950f0 261 Gene3D G3DSA:2.60.120.10 4 96 3.0E-4 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS15570 13a47c3cf361d40d7be1e337080950f0 261 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 209 252 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CVS42_RS15570 13a47c3cf361d40d7be1e337080950f0 261 Gene3D G3DSA:1.10.10.60 213 260 1.2E-9 T 29-03-2018 CVS42_RS15570 13a47c3cf361d40d7be1e337080950f0 261 Pfam PF12833 Helix-turn-helix domain 180 258 1.7E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS15570 13a47c3cf361d40d7be1e337080950f0 261 SUPERFAMILY SSF51182 13 183 2.13E-10 T 29-03-2018 IPR011051 RmlC-like cupin domain CVS42_RS15570 13a47c3cf361d40d7be1e337080950f0 261 Gene3D G3DSA:1.10.10.60 153 212 5.2E-9 T 29-03-2018 CVS42_RS15570 13a47c3cf361d40d7be1e337080950f0 261 SMART SM00342 174 256 1.0E-27 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS22130 4c98dc773763a60d4a4d09ab41f98b50 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.337 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22130 4c98dc773763a60d4a4d09ab41f98b50 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 3.8E-26 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22130 4c98dc773763a60d4a4d09ab41f98b50 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 3.8E-26 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22130 4c98dc773763a60d4a4d09ab41f98b50 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 3.8E-26 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22130 4c98dc773763a60d4a4d09ab41f98b50 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 3.8E-26 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22130 4c98dc773763a60d4a4d09ab41f98b50 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.8E-26 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22130 4c98dc773763a60d4a4d09ab41f98b50 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 1.4E-50 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22130 4c98dc773763a60d4a4d09ab41f98b50 177 SUPERFAMILY SSF47928 3 105 1.96E-25 T 29-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22130 4c98dc773763a60d4a4d09ab41f98b50 177 Gene3D G3DSA:1.10.520.20 2 106 3.1E-27 T 29-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22130 4c98dc773763a60d4a4d09ab41f98b50 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 29-03-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22130 4c98dc773763a60d4a4d09ab41f98b50 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 8.5E-57 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS21920 0f41687c2bd02c23994046e2edd130cb 84 SUPERFAMILY SSF101744 1 67 2.72E-17 T 29-03-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 CVS42_RS21920 0f41687c2bd02c23994046e2edd130cb 84 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 6 67 1.0E-9 T 29-03-2018 IPR009778 Modulator of Rho-dependent transcription termination CVS42_RS21920 0f41687c2bd02c23994046e2edd130cb 84 Gene3D G3DSA:2.30.30.400 7 80 9.8E-16 T 29-03-2018 CVS42_RS16050 11a8bc8dc9e1edeb42e9f38aa61605dc 185 Pfam PF01765 Ribosome recycling factor 20 183 1.2E-64 T 29-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CVS42_RS16050 11a8bc8dc9e1edeb42e9f38aa61605dc 185 SUPERFAMILY SSF55194 2 184 1.83E-71 T 29-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CVS42_RS16050 11a8bc8dc9e1edeb42e9f38aa61605dc 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.1E-76 T 29-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CVS42_RS16050 11a8bc8dc9e1edeb42e9f38aa61605dc 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 28.002 T 29-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CVS42_RS16050 11a8bc8dc9e1edeb42e9f38aa61605dc 185 Gene3D G3DSA:1.10.132.20 73 184 1.6E-39 T 29-03-2018 CVS42_RS16050 11a8bc8dc9e1edeb42e9f38aa61605dc 185 Gene3D G3DSA:1.10.132.20 2 72 4.3E-11 T 29-03-2018 CVS42_RS10210 f1ae18922429bb35803b2a54fca09fef 362 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CVS42_RS10210 f1ae18922429bb35803b2a54fca09fef 362 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.738 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CVS42_RS10210 f1ae18922429bb35803b2a54fca09fef 362 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 7.7E-144 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CVS42_RS10210 f1ae18922429bb35803b2a54fca09fef 362 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CVS42_RS10210 f1ae18922429bb35803b2a54fca09fef 362 PIRSF PIRSF001456 3 361 4.6E-143 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CVS42_RS10210 f1ae18922429bb35803b2a54fca09fef 362 Gene3D G3DSA:3.60.150.10 3 359 8.8E-162 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CVS42_RS10210 f1ae18922429bb35803b2a54fca09fef 362 SUPERFAMILY SSF103263 4 352 1.23E-149 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CVS42_RS10210 f1ae18922429bb35803b2a54fca09fef 362 Pfam PF01264 Chorismate synthase 10 345 4.3E-143 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CVS42_RS10210 f1ae18922429bb35803b2a54fca09fef 362 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CVS42_RS18970 0588d2c205275c51eaf5c670bb4927f4 263 SMART SM00858 138 200 7.9E-5 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CVS42_RS18970 0588d2c205275c51eaf5c670bb4927f4 263 Gene3D G3DSA:3.90.1210.10 138 201 3.6E-8 T 29-03-2018 CVS42_RS18970 0588d2c205275c51eaf5c670bb4927f4 263 Pfam PF13144 Chaperone for flagella basal body P-ring formation 62 260 1.1E-40 T 29-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CVS42_RS18970 0588d2c205275c51eaf5c670bb4927f4 263 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 126 261 2.7E-35 T 29-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CVS42_RS16705 e74eac03d52b3ee74b5c53a322bc1a68 622 Gene3D G3DSA:3.40.50.970 3 296 8.7E-76 T 29-03-2018 CVS42_RS16705 e74eac03d52b3ee74b5c53a322bc1a68 622 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 620 4.8E-295 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CVS42_RS16705 e74eac03d52b3ee74b5c53a322bc1a68 622 Gene3D G3DSA:3.40.50.970 297 490 1.8E-64 T 29-03-2018 CVS42_RS16705 e74eac03d52b3ee74b5c53a322bc1a68 622 SMART SM00861 319 483 6.4E-68 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CVS42_RS16705 e74eac03d52b3ee74b5c53a322bc1a68 622 SUPERFAMILY SSF52518 15 199 1.22E-76 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS16705 e74eac03d52b3ee74b5c53a322bc1a68 622 SUPERFAMILY SSF52518 243 381 1.22E-76 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS16705 e74eac03d52b3ee74b5c53a322bc1a68 622 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CVS42_RS16705 e74eac03d52b3ee74b5c53a322bc1a68 622 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 621 46.082 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CVS42_RS16705 e74eac03d52b3ee74b5c53a322bc1a68 622 Gene3D G3DSA:3.40.50.920 496 622 2.3E-35 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CVS42_RS16705 e74eac03d52b3ee74b5c53a322bc1a68 622 Pfam PF02780 Transketolase, C-terminal domain 496 612 2.8E-26 T 29-03-2018 IPR033248 Transketolase, C-terminal domain CVS42_RS16705 e74eac03d52b3ee74b5c53a322bc1a68 622 SUPERFAMILY SSF52922 493 620 1.7E-31 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CVS42_RS16705 e74eac03d52b3ee74b5c53a322bc1a68 622 SUPERFAMILY SSF52518 318 505 3.58E-60 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS16705 e74eac03d52b3ee74b5c53a322bc1a68 622 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 15 282 1.8E-118 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CVS42_RS16705 e74eac03d52b3ee74b5c53a322bc1a68 622 Pfam PF02779 Transketolase, pyrimidine binding domain 318 478 1.0E-40 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CVS42_RS21725 ce9e3702eb1e61a4f3ea2a53f115f898 387 Gene3D G3DSA:3.40.47.10 1 257 2.9E-52 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS21725 ce9e3702eb1e61a4f3ea2a53f115f898 387 SUPERFAMILY SSF53901 262 386 9.82E-43 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS21725 ce9e3702eb1e61a4f3ea2a53f115f898 387 Pfam PF00108 Thiolase, N-terminal domain 4 253 3.7E-81 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CVS42_RS21725 ce9e3702eb1e61a4f3ea2a53f115f898 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 1.6E-49 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CVS42_RS21725 ce9e3702eb1e61a4f3ea2a53f115f898 387 Gene3D G3DSA:3.40.47.10 258 384 2.4E-31 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS21725 ce9e3702eb1e61a4f3ea2a53f115f898 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 62.715 T 29-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CVS42_RS21725 ce9e3702eb1e61a4f3ea2a53f115f898 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CVS42_RS21725 ce9e3702eb1e61a4f3ea2a53f115f898 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CVS42_RS21725 ce9e3702eb1e61a4f3ea2a53f115f898 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CVS42_RS21725 ce9e3702eb1e61a4f3ea2a53f115f898 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 2.1E-225 T 29-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CVS42_RS21725 ce9e3702eb1e61a4f3ea2a53f115f898 387 PIRSF PIRSF000429 1 387 1.9E-131 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CVS42_RS21725 ce9e3702eb1e61a4f3ea2a53f115f898 387 SUPERFAMILY SSF53901 1 258 4.51E-78 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS21725 ce9e3702eb1e61a4f3ea2a53f115f898 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 3.4E-141 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CVS42_RS01610 fd885c920f165686d07b09b02bb4e99a 305 Gene3D G3DSA:3.90.20.10 196 287 3.9E-4 T 29-03-2018 CVS42_RS01610 fd885c920f165686d07b09b02bb4e99a 305 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 13 141 1.2E-34 T 29-03-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 CVS42_RS19030 c84a70bd9ea96ad3e376b19dfa3b22d3 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 18 255 3.8E-59 T 29-03-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 CVS42_RS19030 c84a70bd9ea96ad3e376b19dfa3b22d3 260 Pfam PF01311 Bacterial export proteins, family 1 18 248 1.4E-62 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CVS42_RS19030 c84a70bd9ea96ad3e376b19dfa3b22d3 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 25 46 2.2E-22 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CVS42_RS19030 c84a70bd9ea96ad3e376b19dfa3b22d3 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 84 103 2.2E-22 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CVS42_RS19030 c84a70bd9ea96ad3e376b19dfa3b22d3 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 183 205 2.2E-22 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CVS42_RS19030 c84a70bd9ea96ad3e376b19dfa3b22d3 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 205 224 2.2E-22 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CVS42_RS10215 b1e95776780b8baab23150778b8a074c 311 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 296 9.3E-136 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CVS42_RS10215 b1e95776780b8baab23150778b8a074c 311 PIRSF PIRSF037167 2 308 4.1E-147 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CVS42_RS10215 b1e95776780b8baab23150778b8a074c 311 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 306 4.1E-93 T 29-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CVS42_RS10215 b1e95776780b8baab23150778b8a074c 311 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 301 53.336 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CVS42_RS10215 b1e95776780b8baab23150778b8a074c 311 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 205 211 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CVS42_RS10215 b1e95776780b8baab23150778b8a074c 311 Gene3D G3DSA:3.40.50.150 102 277 1.1E-38 T 29-03-2018 CVS42_RS10215 b1e95776780b8baab23150778b8a074c 311 Gene3D G3DSA:1.10.8.10 14 101 9.4E-14 T 29-03-2018 CVS42_RS10215 b1e95776780b8baab23150778b8a074c 311 SUPERFAMILY SSF53335 15 295 4.44E-56 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS10215 b1e95776780b8baab23150778b8a074c 311 Pfam PF05175 Methyltransferase small domain 129 218 6.3E-17 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CVS42_RS20740 cec778ef6eac78e2541c60cf96e2923e 655 Pfam PF00027 Cyclic nucleotide-binding domain 200 286 4.5E-14 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CVS42_RS20740 cec778ef6eac78e2541c60cf96e2923e 655 SMART SM00100 174 299 1.1E-4 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CVS42_RS20740 cec778ef6eac78e2541c60cf96e2923e 655 Gene3D G3DSA:3.30.565.10 486 637 6.8E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS20740 cec778ef6eac78e2541c60cf96e2923e 655 SMART SM00387 527 637 1.0E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS20740 cec778ef6eac78e2541c60cf96e2923e 655 Pfam PF00512 His Kinase A (phospho-acceptor) domain 338 366 2.8E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS20740 cec778ef6eac78e2541c60cf96e2923e 655 Gene3D G3DSA:3.40.50.2300 1 135 1.4E-7 T 29-03-2018 CVS42_RS20740 cec778ef6eac78e2541c60cf96e2923e 655 Gene3D G3DSA:2.60.120.10 171 319 4.5E-18 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS20740 cec778ef6eac78e2541c60cf96e2923e 655 SUPERFAMILY SSF47384 333 368 4.32E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS20740 cec778ef6eac78e2541c60cf96e2923e 655 Gene3D G3DSA:1.10.287.130 327 484 4.2E-12 T 29-03-2018 CVS42_RS20740 cec778ef6eac78e2541c60cf96e2923e 655 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 529 636 9.5E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS20740 cec778ef6eac78e2541c60cf96e2923e 655 SUPERFAMILY SSF51206 199 306 2.88E-18 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CVS42_RS20740 cec778ef6eac78e2541c60cf96e2923e 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 593 4.1E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS20740 cec778ef6eac78e2541c60cf96e2923e 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 634 4.1E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS20740 cec778ef6eac78e2541c60cf96e2923e 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 615 4.1E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS20740 cec778ef6eac78e2541c60cf96e2923e 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 579 4.1E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS20740 cec778ef6eac78e2541c60cf96e2923e 655 SUPERFAMILY SSF52172 2 142 1.56E-7 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS20740 cec778ef6eac78e2541c60cf96e2923e 655 SUPERFAMILY SSF55874 474 635 7.47E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 SUPERFAMILY SSF48108 397 554 3.92E-53 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 SMART SM01096 424 547 9.7E-76 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.1E-65 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.1E-65 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.1E-65 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.1E-65 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.1E-65 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.1E-65 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.1E-65 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.3E-71 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 2.2E-36 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 Gene3D G3DSA:1.10.1030.10 404 538 1.1E-51 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1052 0.0 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 SUPERFAMILY SSF52335 937 1071 5.49E-36 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 SMART SM00851 955 1041 2.7E-29 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 Pfam PF02142 MGS-like domain 956 1041 9.0E-17 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 Gene3D G3DSA:3.40.50.20 539 654 8.2E-62 T 29-03-2018 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 SUPERFAMILY SSF52440 557 675 7.63E-50 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 Gene3D G3DSA:3.40.50.1380 927 1054 4.2E-30 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 SUPERFAMILY SSF52440 1 127 9.35E-50 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.455 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 Gene3D G3DSA:3.40.50.20 4 109 1.1E-39 T 29-03-2018 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 Gene3D G3DSA:3.30.470.20 119 403 7.7E-64 T 29-03-2018 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 SUPERFAMILY SSF56059 673 933 5.3E-104 T 29-03-2018 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 SUPERFAMILY SSF56059 128 401 3.01E-109 T 29-03-2018 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 Gene3D G3DSA:3.30.1490.20 655 744 3.7E-23 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 Gene3D G3DSA:3.30.470.20 745 926 4.0E-45 T 29-03-2018 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.178 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12730 c6db2bb5ad53cd604993cf912e5fb779 1074 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 3.8E-40 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS21135 ac283550de5351fa062ee14bc3c0c028 173 Gene3D G3DSA:3.30.70.20 89 132 6.3E-8 T 29-03-2018 CVS42_RS21135 ac283550de5351fa062ee14bc3c0c028 173 Pfam PF12838 4Fe-4S dicluster domain 41 96 7.4E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS21135 ac283550de5351fa062ee14bc3c0c028 173 SUPERFAMILY SSF54862 38 166 2.41E-19 T 29-03-2018 CVS42_RS21135 ac283550de5351fa062ee14bc3c0c028 173 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS21135 ac283550de5351fa062ee14bc3c0c028 173 Gene3D G3DSA:3.30.70.20 46 88 3.0E-11 T 29-03-2018 CVS42_RS21135 ac283550de5351fa062ee14bc3c0c028 173 Gene3D G3DSA:3.30.70.20 20 45 0.0019 T 29-03-2018 CVS42_RS21135 ac283550de5351fa062ee14bc3c0c028 173 Gene3D G3DSA:3.30.70.20 133 171 1.6E-9 T 29-03-2018 CVS42_RS16235 ac2ed7451e1c79c78bf5c3ecf4b6fdbf 276 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 32 276 9.7E-97 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CVS42_RS16235 ac2ed7451e1c79c78bf5c3ecf4b6fdbf 276 SUPERFAMILY SSF111364 32 276 8.11E-84 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CVS42_RS16235 ac2ed7451e1c79c78bf5c3ecf4b6fdbf 276 Gene3D G3DSA:2.40.230.20 27 276 1.7E-72 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CVS42_RS10880 f49a54dc4266209d7909626c97fa8dd1 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CVS42_RS10880 f49a54dc4266209d7909626c97fa8dd1 385 PIRSF PIRSF016578 1 192 4.9E-11 T 29-03-2018 CVS42_RS10880 f49a54dc4266209d7909626c97fa8dd1 385 PIRSF PIRSF016578 211 383 6.6E-15 T 29-03-2018 CVS42_RS10880 f49a54dc4266209d7909626c97fa8dd1 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 2.5E-23 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CVS42_RS10880 f49a54dc4266209d7909626c97fa8dd1 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CVS42_RS10880 f49a54dc4266209d7909626c97fa8dd1 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 5.9E-53 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CVS42_RS10880 f49a54dc4266209d7909626c97fa8dd1 385 SUPERFAMILY SSF47203 225 379 2.42E-62 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CVS42_RS10880 f49a54dc4266209d7909626c97fa8dd1 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 1.0E-26 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CVS42_RS10880 f49a54dc4266209d7909626c97fa8dd1 385 Gene3D G3DSA:1.10.540.10 1 119 2.2E-28 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CVS42_RS10880 f49a54dc4266209d7909626c97fa8dd1 385 Gene3D G3DSA:1.20.140.10 216 384 1.9E-65 T 29-03-2018 CVS42_RS10880 f49a54dc4266209d7909626c97fa8dd1 385 SUPERFAMILY SSF56645 1 240 2.23E-76 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CVS42_RS10880 f49a54dc4266209d7909626c97fa8dd1 385 Gene3D G3DSA:2.40.110.10 120 215 1.2E-37 T 29-03-2018 CVS42_RS16915 37dc0e07c4502f3ce0eb00fa971bd552 413 SUPERFAMILY SSF48452 75 247 5.15E-16 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS16915 37dc0e07c4502f3ce0eb00fa971bd552 413 Gene3D G3DSA:1.25.40.10 18 122 1.2E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS16915 37dc0e07c4502f3ce0eb00fa971bd552 413 Gene3D G3DSA:1.25.40.10 123 193 7.8E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS16915 37dc0e07c4502f3ce0eb00fa971bd552 413 Pfam PF13432 Tetratricopeptide repeat 153 189 0.0027 T 29-03-2018 CVS42_RS16915 37dc0e07c4502f3ce0eb00fa971bd552 413 Pfam PF13432 Tetratricopeptide repeat 82 132 0.0036 T 29-03-2018 CVS42_RS16915 37dc0e07c4502f3ce0eb00fa971bd552 413 SUPERFAMILY SSF48452 292 387 1.96E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS16915 37dc0e07c4502f3ce0eb00fa971bd552 413 Gene3D G3DSA:1.25.40.10 194 282 3.1E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS16915 37dc0e07c4502f3ce0eb00fa971bd552 413 Gene3D G3DSA:1.25.40.10 284 337 0.007 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS16915 37dc0e07c4502f3ce0eb00fa971bd552 413 Gene3D G3DSA:1.25.40.10 338 401 6.5E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS16915 37dc0e07c4502f3ce0eb00fa971bd552 413 SMART SM00028 72 105 270.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS16915 37dc0e07c4502f3ce0eb00fa971bd552 413 SMART SM00028 358 391 55.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS16915 37dc0e07c4502f3ce0eb00fa971bd552 413 SMART SM00028 148 181 0.38 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS16915 37dc0e07c4502f3ce0eb00fa971bd552 413 SMART SM00028 289 322 79.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS19895 adf8010ebb620e8ea091350171b9eda8 247 Gene3D G3DSA:3.40.190.10 15 109 1.0E-7 T 29-03-2018 CVS42_RS19895 adf8010ebb620e8ea091350171b9eda8 247 SUPERFAMILY SSF53850 24 244 1.85E-27 T 29-03-2018 CVS42_RS19895 adf8010ebb620e8ea091350171b9eda8 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 244 4.5E-15 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS19895 adf8010ebb620e8ea091350171b9eda8 247 Gene3D G3DSA:3.40.190.10 110 247 2.2E-9 T 29-03-2018 CVS42_RS19895 adf8010ebb620e8ea091350171b9eda8 247 SMART SM00062 23 247 6.5E-4 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS07390 8ae5a41f9de0a0dfcd4c198ae168e97c 257 SMART SM00079 26 252 5.1E-4 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CVS42_RS07390 8ae5a41f9de0a0dfcd4c198ae168e97c 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 251 2.3E-64 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS07390 8ae5a41f9de0a0dfcd4c198ae168e97c 257 SMART SM00062 26 253 5.1E-67 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS07390 8ae5a41f9de0a0dfcd4c198ae168e97c 257 Gene3D G3DSA:3.40.190.10 18 141 8.0E-37 T 29-03-2018 CVS42_RS07390 8ae5a41f9de0a0dfcd4c198ae168e97c 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CVS42_RS07390 8ae5a41f9de0a0dfcd4c198ae168e97c 257 Gene3D G3DSA:3.40.190.10 142 257 2.3E-18 T 29-03-2018 CVS42_RS07390 8ae5a41f9de0a0dfcd4c198ae168e97c 257 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 6 250 1.4E-82 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CVS42_RS07390 8ae5a41f9de0a0dfcd4c198ae168e97c 257 SUPERFAMILY SSF53850 1 254 3.03E-70 T 29-03-2018 CVS42_RS13615 afe03acbb04d530a7ada00c6335cb042 303 Pfam PF00072 Response regulator receiver domain 181 300 9.6E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS13615 afe03acbb04d530a7ada00c6335cb042 303 SMART SM00448 179 299 1.6E-20 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS13615 afe03acbb04d530a7ada00c6335cb042 303 Gene3D G3DSA:2.30.30.40 105 147 4.8E-12 T 29-03-2018 CVS42_RS13615 afe03acbb04d530a7ada00c6335cb042 303 PIRSF PIRSF002867 1 303 1.3E-105 T 29-03-2018 IPR024181 Chemotaxis response regulator CheV CVS42_RS13615 afe03acbb04d530a7ada00c6335cb042 303 Gene3D G3DSA:2.40.50.180 39 104 5.2E-13 T 29-03-2018 CVS42_RS13615 afe03acbb04d530a7ada00c6335cb042 303 Pfam PF01584 CheW-like domain 21 155 3.5E-35 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS13615 afe03acbb04d530a7ada00c6335cb042 303 SUPERFAMILY SSF50341 16 157 3.27E-36 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS13615 afe03acbb04d530a7ada00c6335cb042 303 SUPERFAMILY SSF52172 179 303 8.11E-27 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS13615 afe03acbb04d530a7ada00c6335cb042 303 Gene3D G3DSA:3.40.50.2300 166 303 3.8E-26 T 29-03-2018 CVS42_RS13615 afe03acbb04d530a7ada00c6335cb042 303 SMART SM00260 17 153 5.6E-21 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS02260 c742d16d14d4a0f51b477eaa00f32bbe 680 SUPERFAMILY SSF52833 554 668 1.81E-13 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS02260 c742d16d14d4a0f51b477eaa00f32bbe 680 Pfam PF11412 Disulphide bond corrector protein DsbC 38 141 7.3E-17 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CVS42_RS02260 c742d16d14d4a0f51b477eaa00f32bbe 680 ProSitePatterns PS00194 Thioredoxin family active site. 579 597 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CVS42_RS02260 c742d16d14d4a0f51b477eaa00f32bbe 680 Pfam PF13899 Thioredoxin-like 560 645 4.4E-12 T 29-03-2018 CVS42_RS02260 c742d16d14d4a0f51b477eaa00f32bbe 680 Gene3D G3DSA:2.60.40.1250 28 152 2.7E-8 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CVS42_RS02260 c742d16d14d4a0f51b477eaa00f32bbe 680 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 283 485 2.6E-7 T 29-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CVS42_RS02260 c742d16d14d4a0f51b477eaa00f32bbe 680 Gene3D G3DSA:3.40.30.10 547 652 1.7E-8 T 29-03-2018 CVS42_RS12065 6a09f56583414a620a453f113652a340 291 Pfam PF00691 OmpA family 172 270 3.1E-12 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS12065 6a09f56583414a620a453f113652a340 291 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 3 55 4.5E-18 T 29-03-2018 IPR025713 Motility protein B, N-terminal domain CVS42_RS12065 6a09f56583414a620a453f113652a340 291 Gene3D G3DSA:3.30.1330.60 113 289 3.4E-34 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS12065 6a09f56583414a620a453f113652a340 291 SUPERFAMILY SSF103088 159 276 2.35E-26 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS10165 5b08ef16fe8d9aff66ca449c6f17d6af 366 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 275 357 7.2E-21 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS10165 5b08ef16fe8d9aff66ca449c6f17d6af 366 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 286 293 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CVS42_RS10165 5b08ef16fe8d9aff66ca449c6f17d6af 366 SUPERFAMILY SSF55804 5 141 1.01E-37 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CVS42_RS10165 5b08ef16fe8d9aff66ca449c6f17d6af 366 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain CVS42_RS10165 5b08ef16fe8d9aff66ca449c6f17d6af 366 Gene3D G3DSA:3.40.930.10 3 143 8.0E-31 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CVS42_RS10165 5b08ef16fe8d9aff66ca449c6f17d6af 366 Gene3D G3DSA:3.30.1340.10 271 358 7.7E-27 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS10165 5b08ef16fe8d9aff66ca449c6f17d6af 366 Pfam PF00381 PTS HPr component phosphorylation site 276 357 5.2E-26 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS10165 5b08ef16fe8d9aff66ca449c6f17d6af 366 PRINTS PR00107 Phosphocarrier protein signature 329 346 2.7E-16 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS10165 5b08ef16fe8d9aff66ca449c6f17d6af 366 PRINTS PR00107 Phosphocarrier protein signature 286 302 2.7E-16 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS10165 5b08ef16fe8d9aff66ca449c6f17d6af 366 PRINTS PR00107 Phosphocarrier protein signature 314 329 2.7E-16 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS10165 5b08ef16fe8d9aff66ca449c6f17d6af 366 SUPERFAMILY SSF55804 155 250 3.4E-6 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CVS42_RS10165 5b08ef16fe8d9aff66ca449c6f17d6af 366 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 315 330 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CVS42_RS10165 5b08ef16fe8d9aff66ca449c6f17d6af 366 SUPERFAMILY SSF55594 276 364 2.75E-24 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS10165 5b08ef16fe8d9aff66ca449c6f17d6af 366 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 140 5.5E-30 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CVS42_RS00445 7c790bddce4d33414fca7219d912c8c6 396 SUPERFAMILY SSF53383 5 394 3.32E-123 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS00445 7c790bddce4d33414fca7219d912c8c6 396 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CVS42_RS00445 7c790bddce4d33414fca7219d912c8c6 396 Gene3D G3DSA:3.40.640.10 99 275 3.3E-29 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS00445 7c790bddce4d33414fca7219d912c8c6 396 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 396 6.0E-216 T 29-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 CVS42_RS00445 7c790bddce4d33414fca7219d912c8c6 396 Gene3D G3DSA:3.90.1150.10 276 396 5.5E-42 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS00445 7c790bddce4d33414fca7219d912c8c6 396 Gene3D G3DSA:3.90.1150.10 20 98 3.2E-16 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS00445 7c790bddce4d33414fca7219d912c8c6 396 Pfam PF00155 Aminotransferase class I and II 42 385 3.3E-75 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CVS42_RS00445 7c790bddce4d33414fca7219d912c8c6 396 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 394 54.727 T 29-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 CVS42_RS03055 f3553f5414656c01edeff1d778c4e4cc 286 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 23 267 2.3E-91 T 29-03-2018 IPR021254 Protein of unknown function DUF2806 CVS42_RS03055 f3553f5414656c01edeff1d778c4e4cc 286 Pfam PF10987 Protein of unknown function (DUF2806) 43 259 2.0E-73 T 29-03-2018 IPR021254 Protein of unknown function DUF2806 CVS42_RS21635 86874e9478e8d2cc88956456fe25562c 549 Gene3D G3DSA:3.40.50.10490 139 258 2.9E-53 T 29-03-2018 CVS42_RS21635 86874e9478e8d2cc88956456fe25562c 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 29-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS21635 86874e9478e8d2cc88956456fe25562c 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 29-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS21635 86874e9478e8d2cc88956456fe25562c 549 SUPERFAMILY SSF53697 5 547 5.28E-228 T 29-03-2018 CVS42_RS21635 86874e9478e8d2cc88956456fe25562c 549 Gene3D G3DSA:1.10.1390.10 513 549 5.2E-20 T 29-03-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS21635 86874e9478e8d2cc88956456fe25562c 549 Gene3D G3DSA:3.40.50.10490 7 138 2.1E-47 T 29-03-2018 CVS42_RS21635 86874e9478e8d2cc88956456fe25562c 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.528 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS21635 86874e9478e8d2cc88956456fe25562c 549 Pfam PF00342 Phosphoglucose isomerase 52 541 3.9E-254 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS21635 86874e9478e8d2cc88956456fe25562c 549 Gene3D G3DSA:3.40.50.10490 259 512 6.5E-126 T 29-03-2018 CVS42_RS21635 86874e9478e8d2cc88956456fe25562c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 8.0E-56 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS21635 86874e9478e8d2cc88956456fe25562c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 8.0E-56 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS21635 86874e9478e8d2cc88956456fe25562c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 8.0E-56 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS21635 86874e9478e8d2cc88956456fe25562c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 8.0E-56 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS21635 86874e9478e8d2cc88956456fe25562c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 8.0E-56 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS21635 86874e9478e8d2cc88956456fe25562c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 8.0E-56 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS09315 ca1bb0a09310ac9b8025654acb46872e 258 SMART SM01092 161 251 1.5E-7 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CVS42_RS09315 ca1bb0a09310ac9b8025654acb46872e 258 TIGRFAM TIGR03312 Se_sel_red_FAD: probable selenate reductase, FAD-binding subunit 2 258 3.3E-141 T 29-03-2018 IPR017698 Probable selenate reductase, FAD-binding subunit CVS42_RS09315 ca1bb0a09310ac9b8025654acb46872e 258 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 4 156 8.4E-22 T 29-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CVS42_RS09315 ca1bb0a09310ac9b8025654acb46872e 258 SUPERFAMILY SSF55447 164 253 2.09E-11 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CVS42_RS09315 ca1bb0a09310ac9b8025654acb46872e 258 Gene3D G3DSA:3.30.465.10 54 157 8.0E-16 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CVS42_RS09315 ca1bb0a09310ac9b8025654acb46872e 258 SUPERFAMILY SSF56176 4 156 5.32E-23 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CVS42_RS09315 ca1bb0a09310ac9b8025654acb46872e 258 Gene3D G3DSA:3.30.390.50 159 258 4.6E-13 T 29-03-2018 CVS42_RS02775 d9aee12498ca817df3dc80eac56fcd22 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.2E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS02775 d9aee12498ca817df3dc80eac56fcd22 299 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 295 6.6E-113 T 29-03-2018 IPR017685 HTH-type transcriptional regulator ArgP CVS42_RS02775 d9aee12498ca817df3dc80eac56fcd22 299 SUPERFAMILY SSF46785 4 110 4.43E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02775 d9aee12498ca817df3dc80eac56fcd22 299 Pfam PF03466 LysR substrate binding domain 88 293 1.3E-16 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS02775 d9aee12498ca817df3dc80eac56fcd22 299 Gene3D G3DSA:3.40.190.10 94 182 1.3E-38 T 29-03-2018 CVS42_RS02775 d9aee12498ca817df3dc80eac56fcd22 299 Gene3D G3DSA:3.40.190.10 183 266 5.5E-5 T 29-03-2018 CVS42_RS02775 d9aee12498ca817df3dc80eac56fcd22 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.6E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS02775 d9aee12498ca817df3dc80eac56fcd22 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.6E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS02775 d9aee12498ca817df3dc80eac56fcd22 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.6E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS02775 d9aee12498ca817df3dc80eac56fcd22 299 Gene3D G3DSA:1.10.10.10 1 88 4.2E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02775 d9aee12498ca817df3dc80eac56fcd22 299 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 47.99 T 29-03-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria CVS42_RS02775 d9aee12498ca817df3dc80eac56fcd22 299 SUPERFAMILY SSF53850 88 295 1.28E-23 T 29-03-2018 CVS42_RS00865 ca2284f0b3e315a3c8b6babd068231c9 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.361 T 29-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 CVS42_RS00865 ca2284f0b3e315a3c8b6babd068231c9 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.6E-62 T 29-03-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 CVS42_RS00865 ca2284f0b3e315a3c8b6babd068231c9 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 2.0E-82 T 29-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 CVS42_RS00865 ca2284f0b3e315a3c8b6babd068231c9 161 Pfam PF03737 Aldolase/RraA 6 152 2.4E-34 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CVS42_RS00865 ca2284f0b3e315a3c8b6babd068231c9 161 Gene3D G3DSA:3.50.30.40 1 161 1.9E-36 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CVS42_RS00865 ca2284f0b3e315a3c8b6babd068231c9 161 SUPERFAMILY SSF89562 2 159 1.57E-43 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CVS42_RS18780 0e93bae4d6c739a9ad44a057eacdc8b0 419 SUPERFAMILY SSF53067 8 221 1.86E-63 T 29-03-2018 CVS42_RS18780 0e93bae4d6c739a9ad44a057eacdc8b0 419 PIRSF PIRSF003101 1 419 3.4E-154 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CVS42_RS18780 0e93bae4d6c739a9ad44a057eacdc8b0 419 SMART SM00842 10 196 4.0E-101 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CVS42_RS18780 0e93bae4d6c739a9ad44a057eacdc8b0 419 Pfam PF14450 Cell division protein FtsA 207 381 9.7E-24 T 29-03-2018 CVS42_RS18780 0e93bae4d6c739a9ad44a057eacdc8b0 419 Pfam PF14450 Cell division protein FtsA 11 187 1.3E-10 T 29-03-2018 CVS42_RS18780 0e93bae4d6c739a9ad44a057eacdc8b0 419 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 419 29.787 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CVS42_RS18780 0e93bae4d6c739a9ad44a057eacdc8b0 419 Gene3D G3DSA:3.30.420.40 2 186 1.5E-37 T 29-03-2018 CVS42_RS18780 0e93bae4d6c739a9ad44a057eacdc8b0 419 Gene3D G3DSA:3.30.420.40 251 359 8.4E-19 T 29-03-2018 CVS42_RS18780 0e93bae4d6c739a9ad44a057eacdc8b0 419 Gene3D G3DSA:3.30.420.40 197 250 4.9E-5 T 29-03-2018 CVS42_RS18780 0e93bae4d6c739a9ad44a057eacdc8b0 419 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.7E-29 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CVS42_RS18780 0e93bae4d6c739a9ad44a057eacdc8b0 419 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 2.8E-158 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CVS42_RS18780 0e93bae4d6c739a9ad44a057eacdc8b0 419 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 208 221 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CVS42_RS18780 0e93bae4d6c739a9ad44a057eacdc8b0 419 SUPERFAMILY SSF53067 198 384 6.74E-44 T 29-03-2018 CVS42_RS04115 6839c661632dd2aae78e9327214b5dbe 266 Pfam PF03472 Autoinducer binding domain 27 174 4.1E-33 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CVS42_RS04115 6839c661632dd2aae78e9327214b5dbe 266 SUPERFAMILY SSF75516 13 177 8.24E-35 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CVS42_RS04115 6839c661632dd2aae78e9327214b5dbe 266 SMART SM00421 186 243 5.4E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS04115 6839c661632dd2aae78e9327214b5dbe 266 SUPERFAMILY SSF46894 177 249 1.73E-17 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS04115 6839c661632dd2aae78e9327214b5dbe 266 Gene3D G3DSA:1.10.10.10 175 249 1.3E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS04115 6839c661632dd2aae78e9327214b5dbe 266 ProSitePatterns PS00622 LuxR-type HTH domain signature. 203 230 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS04115 6839c661632dd2aae78e9327214b5dbe 266 Gene3D G3DSA:3.30.450.80 9 174 5.4E-38 T 29-03-2018 CVS42_RS04115 6839c661632dd2aae78e9327214b5dbe 266 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 203 2.9E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS04115 6839c661632dd2aae78e9327214b5dbe 266 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 203 219 2.9E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS04115 6839c661632dd2aae78e9327214b5dbe 266 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 219 231 2.9E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS04115 6839c661632dd2aae78e9327214b5dbe 266 Pfam PF00196 Bacterial regulatory proteins, luxR family 189 243 5.3E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS13540 cb209a7d2a1fc9ed24ee767db75042f9 689 PIRSF PIRSF015589 1 689 2.0E-241 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CVS42_RS13540 cb209a7d2a1fc9ed24ee767db75042f9 689 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 110 7.8E-31 T 29-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CVS42_RS13540 cb209a7d2a1fc9ed24ee767db75042f9 689 SUPERFAMILY SSF140356 4 105 1.83E-30 T 29-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CVS42_RS13540 cb209a7d2a1fc9ed24ee767db75042f9 689 Gene3D G3DSA:1.20.58.310 9 108 7.8E-33 T 29-03-2018 CVS42_RS13540 cb209a7d2a1fc9ed24ee767db75042f9 689 Pfam PF13090 Polyphosphate kinase C-terminal domain 332 677 1.9E-146 T 29-03-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 CVS42_RS13540 cb209a7d2a1fc9ed24ee767db75042f9 689 Gene3D G3DSA:3.30.870.10 322 500 2.3E-20 T 29-03-2018 CVS42_RS13540 cb209a7d2a1fc9ed24ee767db75042f9 689 SUPERFAMILY SSF143724 107 315 1.65E-57 T 29-03-2018 CVS42_RS13540 cb209a7d2a1fc9ed24ee767db75042f9 689 Gene3D G3DSA:3.30.870.10 501 687 1.7E-36 T 29-03-2018 CVS42_RS13540 cb209a7d2a1fc9ed24ee767db75042f9 689 Pfam PF02503 Polyphosphate kinase middle domain 120 319 5.1E-41 T 29-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CVS42_RS13540 cb209a7d2a1fc9ed24ee767db75042f9 689 SUPERFAMILY SSF56024 501 684 2.92E-71 T 29-03-2018 CVS42_RS13540 cb209a7d2a1fc9ed24ee767db75042f9 689 Gene3D G3DSA:3.30.1840.10 109 308 2.2E-51 T 29-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CVS42_RS13540 cb209a7d2a1fc9ed24ee767db75042f9 689 SUPERFAMILY SSF56024 318 492 1.37E-53 T 29-03-2018 CVS42_RS13540 cb209a7d2a1fc9ed24ee767db75042f9 689 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 678 2.9E-262 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CVS42_RS13540 cb209a7d2a1fc9ed24ee767db75042f9 689 Hamap MF_00347 Polyphosphate kinase [ppk]. 5 682 26.749 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CVS42_RS16355 789373aac2cdae3e47cbc08887598848 295 SMART SM00422 17 86 1.5E-20 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS16355 789373aac2cdae3e47cbc08887598848 295 Gene3D G3DSA:1.10.1660.10 3 126 3.3E-23 T 29-03-2018 CVS42_RS16355 789373aac2cdae3e47cbc08887598848 295 Pfam PF13411 MerR HTH family regulatory protein 17 85 4.4E-18 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS16355 789373aac2cdae3e47cbc08887598848 295 SUPERFAMILY SSF46955 17 103 1.65E-19 T 29-03-2018 IPR009061 Putative DNA-binding domain CVS42_RS08645 e9a35c1bbed55b0dff4ecf9f7c7a0eb9 310 SUPERFAMILY SSF64288 131 307 4.24E-42 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CVS42_RS08645 e9a35c1bbed55b0dff4ecf9f7c7a0eb9 310 Pfam PF00392 Bacterial regulatory proteins, gntR family 81 143 3.6E-19 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS08645 e9a35c1bbed55b0dff4ecf9f7c7a0eb9 310 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 79 309 3.4E-122 T 29-03-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR CVS42_RS08645 e9a35c1bbed55b0dff4ecf9f7c7a0eb9 310 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 117 133 6.3E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS08645 e9a35c1bbed55b0dff4ecf9f7c7a0eb9 310 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 103 117 6.3E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS08645 e9a35c1bbed55b0dff4ecf9f7c7a0eb9 310 Gene3D G3DSA:3.40.1410.10 146 309 2.1E-34 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CVS42_RS08645 e9a35c1bbed55b0dff4ecf9f7c7a0eb9 310 Gene3D G3DSA:1.10.10.10 76 145 2.4E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08645 e9a35c1bbed55b0dff4ecf9f7c7a0eb9 310 Pfam PF07702 UTRA domain 164 301 1.1E-33 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CVS42_RS08645 e9a35c1bbed55b0dff4ecf9f7c7a0eb9 310 SMART SM00866 164 303 2.2E-34 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CVS42_RS08645 e9a35c1bbed55b0dff4ecf9f7c7a0eb9 310 SMART SM00345 84 143 2.0E-20 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS08645 e9a35c1bbed55b0dff4ecf9f7c7a0eb9 310 SUPERFAMILY SSF46785 77 147 2.48E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02925 bfa276715a63e63e8332ce67c7d33e0c 409 Pfam PF07690 Major Facilitator Superfamily 14 285 4.6E-32 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS02925 bfa276715a63e63e8332ce67c7d33e0c 409 ProSitePatterns PS00216 Sugar transport proteins signature 1. 74 90 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CVS42_RS02925 bfa276715a63e63e8332ce67c7d33e0c 409 Gene3D G3DSA:1.20.1250.20 6 209 2.3E-29 T 29-03-2018 CVS42_RS02925 bfa276715a63e63e8332ce67c7d33e0c 409 Gene3D G3DSA:1.20.1250.20 210 407 6.8E-23 T 29-03-2018 CVS42_RS02925 bfa276715a63e63e8332ce67c7d33e0c 409 SUPERFAMILY SSF103473 1 402 1.16E-57 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS01730 4671253f02e122a258540fc38c35f402 320 SUPERFAMILY SSF55073 169 319 1.8E-40 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS01730 4671253f02e122a258540fc38c35f402 320 Gene3D G3DSA:3.30.70.270 160 320 5.5E-46 T 29-03-2018 CVS42_RS01730 4671253f02e122a258540fc38c35f402 320 SMART SM00267 151 320 5.4E-37 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS01730 4671253f02e122a258540fc38c35f402 320 SUPERFAMILY SSF55781 28 163 2.03E-30 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS01730 4671253f02e122a258540fc38c35f402 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 319 5.8E-39 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS01730 4671253f02e122a258540fc38c35f402 320 Pfam PF01590 GAF domain 28 157 1.8E-11 T 29-03-2018 IPR003018 GAF domain GO:0005515 CVS42_RS01730 4671253f02e122a258540fc38c35f402 320 Gene3D G3DSA:3.30.450.40 9 159 2.9E-27 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS01730 4671253f02e122a258540fc38c35f402 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 319 5.3E-38 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS01730 4671253f02e122a258540fc38c35f402 320 SMART SM00065 26 168 1.0E-14 T 29-03-2018 IPR003018 GAF domain GO:0005515 CVS42_RS00285 bae6c1ffdcaacf0b19b37a7c8f07df98 284 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 2.7E-70 T 29-03-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 CVS42_RS00285 bae6c1ffdcaacf0b19b37a7c8f07df98 284 SUPERFAMILY SSF103481 35 131 1.23E-6 T 29-03-2018 CVS42_RS00285 bae6c1ffdcaacf0b19b37a7c8f07df98 284 SUPERFAMILY SSF103481 178 279 1.31E-7 T 29-03-2018 CVS42_RS02565 1afb17ce148f875648dd0e2de97e7a8d 381 SUPERFAMILY SSF102114 5 379 1.08E-107 T 29-03-2018 CVS42_RS02565 1afb17ce148f875648dd0e2de97e7a8d 381 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 371 3.9E-128 T 29-03-2018 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 CVS42_RS02565 1afb17ce148f875648dd0e2de97e7a8d 381 Pfam PF04055 Radical SAM superfamily 11 175 7.2E-17 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS02565 1afb17ce148f875648dd0e2de97e7a8d 381 Gene3D G3DSA:3.20.20.70 5 308 1.2E-48 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS02565 1afb17ce148f875648dd0e2de97e7a8d 381 Pfam PF06969 HemN C-terminal domain 306 367 8.2E-9 T 29-03-2018 IPR010723 HemN, C-terminal CVS42_RS02565 1afb17ce148f875648dd0e2de97e7a8d 381 SMART SM00729 6 223 1.5E-52 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CVS42_RS16230 cc213aa2ae36cad3d69a7cc109b1e3d9 160 Gene3D G3DSA:3.30.70.990 10 94 4.9E-29 T 29-03-2018 IPR035570 UPF0234 N-terminal domain CVS42_RS16230 cc213aa2ae36cad3d69a7cc109b1e3d9 160 Gene3D G3DSA:3.30.70.860 95 159 2.6E-33 T 29-03-2018 IPR035571 UPF0234/UPF0381 domain CVS42_RS16230 cc213aa2ae36cad3d69a7cc109b1e3d9 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 1.6E-63 T 29-03-2018 IPR007551 Protein of unknown function DUF520 CVS42_RS16230 cc213aa2ae36cad3d69a7cc109b1e3d9 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.325 T 29-03-2018 IPR007551 Protein of unknown function DUF520 CVS42_RS16230 cc213aa2ae36cad3d69a7cc109b1e3d9 160 SUPERFAMILY SSF89963 2 86 1.52E-29 T 29-03-2018 IPR007551 Protein of unknown function DUF520 CVS42_RS16230 cc213aa2ae36cad3d69a7cc109b1e3d9 160 SUPERFAMILY SSF89963 88 160 7.59E-30 T 29-03-2018 IPR007551 Protein of unknown function DUF520 CVS42_RS00655 e09f251942bc7a9bfb8630ff65d02045 188 SUPERFAMILY SSF88697 1 180 1.12E-47 T 29-03-2018 IPR015947 PUA-like domain CVS42_RS00655 e09f251942bc7a9bfb8630ff65d02045 188 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 132 1.9E-14 T 29-03-2018 IPR003111 Lon, substrate-binding domain CVS42_RS00655 e09f251942bc7a9bfb8630ff65d02045 188 SMART SM00464 2 182 0.0012 T 29-03-2018 IPR003111 Lon, substrate-binding domain CVS42_RS00655 e09f251942bc7a9bfb8630ff65d02045 188 Gene3D G3DSA:1.10.4060.10 112 187 7.7E-8 T 29-03-2018 CVS42_RS00655 e09f251942bc7a9bfb8630ff65d02045 188 Gene3D G3DSA:2.30.130.40 1 106 2.2E-19 T 29-03-2018 CVS42_RS00325 7008b1326945ebd6ca5a07fa2e0412bc 174 Gene3D G3DSA:1.20.1260.10 2 162 2.0E-44 T 29-03-2018 IPR012347 Ferritin-related CVS42_RS00325 7008b1326945ebd6ca5a07fa2e0412bc 174 SUPERFAMILY SSF47240 1 159 2.18E-59 T 29-03-2018 IPR009078 Ferritin-like superfamily CVS42_RS00325 7008b1326945ebd6ca5a07fa2e0412bc 174 Pfam PF00210 Ferritin-like domain 7 142 1.1E-40 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 SUPERFAMILY SSF50621 272 406 2.62E-40 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 Gene3D G3DSA:3.20.20.10 41 254 1.6E-33 T 29-03-2018 IPR029066 PLP-binding barrel CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 SUPERFAMILY SSF51419 46 269 3.05E-47 T 29-03-2018 IPR029066 PLP-binding barrel CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 SMART SM01005 279 407 3.1E-48 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 Hamap MF_01201 Alanine racemase. 39 407 25.474 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 Pfam PF00842 Alanine racemase, C-terminal domain 279 388 2.0E-32 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 71 81 - T 29-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 Pfam PF01168 Alanine racemase, N-terminal domain 46 269 9.0E-48 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 Gene3D G3DSA:2.40.37.10 255 408 5.4E-50 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 PRINTS PR00992 Alanine racemase signature 66 82 4.1E-37 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 PRINTS PR00992 Alanine racemase signature 164 176 4.1E-37 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 PRINTS PR00992 Alanine racemase signature 200 211 4.1E-37 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 PRINTS PR00992 Alanine racemase signature 333 350 4.1E-37 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 PRINTS PR00992 Alanine racemase signature 295 310 4.1E-37 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 PRINTS PR00992 Alanine racemase signature 102 120 4.1E-37 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 PRINTS PR00992 Alanine racemase signature 243 270 4.1E-37 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 PRINTS PR00992 Alanine racemase signature 312 327 4.1E-37 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS12810 0b6f585a976fb98f36ec0669a2a901f8 408 TIGRFAM TIGR00492 alr: alanine racemase 42 378 1.2E-66 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS10985 e4521a4af49faa29d0b8d282aa9fbb46 268 Gene3D G3DSA:3.90.226.10 1 260 1.2E-61 T 29-03-2018 CVS42_RS10985 e4521a4af49faa29d0b8d282aa9fbb46 268 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 240 2.3E-40 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CVS42_RS10985 e4521a4af49faa29d0b8d282aa9fbb46 268 SUPERFAMILY SSF52096 4 248 4.7E-64 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS01710 1c77ccd794126ea469c923d1c662b2ec 350 Gene3D G3DSA:1.10.443.10 177 330 2.4E-37 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS01710 1c77ccd794126ea469c923d1c662b2ec 350 SUPERFAMILY SSF56349 64 326 2.06E-44 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CVS42_RS01710 1c77ccd794126ea469c923d1c662b2ec 350 Gene3D G3DSA:1.10.150.130 57 176 7.1E-7 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CVS42_RS01710 1c77ccd794126ea469c923d1c662b2ec 350 Pfam PF00589 Phage integrase family 259 318 1.4E-12 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS01710 1c77ccd794126ea469c923d1c662b2ec 350 Pfam PF00589 Phage integrase family 175 244 6.9E-7 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS15845 83591a2ba728b13da6f8db221287573e 311 SUPERFAMILY SSF46785 1 84 4.13E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS15845 83591a2ba728b13da6f8db221287573e 311 Gene3D G3DSA:1.10.10.10 1 83 6.0E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS15845 83591a2ba728b13da6f8db221287573e 311 Gene3D G3DSA:3.40.190.10 177 269 5.1E-21 T 29-03-2018 CVS42_RS15845 83591a2ba728b13da6f8db221287573e 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.6E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS15845 83591a2ba728b13da6f8db221287573e 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.6E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS15845 83591a2ba728b13da6f8db221287573e 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.6E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS15845 83591a2ba728b13da6f8db221287573e 311 Gene3D G3DSA:3.40.190.10 88 176 9.1E-16 T 29-03-2018 CVS42_RS15845 83591a2ba728b13da6f8db221287573e 311 SUPERFAMILY SSF53850 88 293 1.65E-32 T 29-03-2018 CVS42_RS15845 83591a2ba728b13da6f8db221287573e 311 Pfam PF03466 LysR substrate binding domain 87 293 4.4E-35 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS15845 83591a2ba728b13da6f8db221287573e 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.9E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS17250 6db0973de3f314b9d70711736c614f90 294 SMART SM00244 18 187 2.6E-45 T 29-03-2018 IPR001107 Band 7 domain CVS42_RS17250 6db0973de3f314b9d70711736c614f90 294 SUPERFAMILY SSF117892 56 192 4.18E-27 T 29-03-2018 IPR001107 Band 7 domain CVS42_RS17250 6db0973de3f314b9d70711736c614f90 294 TIGRFAM TIGR01932 hflC: HflC protein 156 287 3.6E-54 T 29-03-2018 IPR010200 HflC GO:0016021|GO:0052547 CVS42_RS17250 6db0973de3f314b9d70711736c614f90 294 TIGRFAM TIGR01932 hflC: HflC protein 1 148 6.6E-57 T 29-03-2018 IPR010200 HflC GO:0016021|GO:0052547 CVS42_RS17250 6db0973de3f314b9d70711736c614f90 294 PIRSF PIRSF005651 1 294 4.1E-99 T 29-03-2018 IPR010200 HflC GO:0016021|GO:0052547 CVS42_RS17250 6db0973de3f314b9d70711736c614f90 294 Pfam PF01145 SPFH domain / Band 7 family 22 202 2.9E-32 T 29-03-2018 IPR001107 Band 7 domain CVS42_RS19300 cbaf5e14df241cd8ceb6a2725855b025 236 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 1.5E-15 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS19300 cbaf5e14df241cd8ceb6a2725855b025 236 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 200 3.4E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS19300 cbaf5e14df241cd8ceb6a2725855b025 236 Gene3D G3DSA:3.40.50.1000 1 236 1.9E-25 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS19300 cbaf5e14df241cd8ceb6a2725855b025 236 SUPERFAMILY SSF56784 11 235 2.94E-39 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS14635 b9fced837c8aabc298f4da6b39178f97 424 TIGRFAM TIGR00260 thrC: threonine synthase 60 387 2.3E-112 T 29-03-2018 IPR004450 Threonine synthase-like CVS42_RS14635 b9fced837c8aabc298f4da6b39178f97 424 Gene3D G3DSA:3.40.50.1100 195 319 2.1E-42 T 29-03-2018 CVS42_RS14635 b9fced837c8aabc298f4da6b39178f97 424 Gene3D G3DSA:3.40.50.1100 320 392 3.9E-11 T 29-03-2018 CVS42_RS14635 b9fced837c8aabc298f4da6b39178f97 424 Pfam PF14821 Threonine synthase N terminus 7 78 1.6E-7 T 29-03-2018 IPR029144 Threonine synthase, N-terminal CVS42_RS14635 b9fced837c8aabc298f4da6b39178f97 424 Gene3D G3DSA:3.90.1380.10 1 79 1.0E-14 T 29-03-2018 IPR029144 Threonine synthase, N-terminal CVS42_RS14635 b9fced837c8aabc298f4da6b39178f97 424 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CVS42_RS14635 b9fced837c8aabc298f4da6b39178f97 424 Gene3D G3DSA:3.40.50.1100 99 194 1.5E-19 T 29-03-2018 CVS42_RS14635 b9fced837c8aabc298f4da6b39178f97 424 SUPERFAMILY SSF53686 1 423 3.4E-130 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CVS42_RS14635 b9fced837c8aabc298f4da6b39178f97 424 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 86 367 1.1E-21 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CVS42_RS21080 5f3048f9b7f67e1253c910b4e9823eeb 430 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 429 1.9E-153 T 29-03-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS21080 5f3048f9b7f67e1253c910b4e9823eeb 430 Gene3D G3DSA:3.40.50.150 228 430 1.7E-57 T 29-03-2018 CVS42_RS21080 5f3048f9b7f67e1253c910b4e9823eeb 430 Gene3D G3DSA:1.10.940.10 1 142 6.9E-32 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CVS42_RS21080 5f3048f9b7f67e1253c910b4e9823eeb 430 Pfam PF01189 16S rRNA methyltransferase RsmB/F 237 427 6.8E-72 T 29-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS21080 5f3048f9b7f67e1253c910b4e9823eeb 430 SUPERFAMILY SSF53335 137 429 4.37E-75 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS21080 5f3048f9b7f67e1253c910b4e9823eeb 430 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 314 325 - T 29-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS21080 5f3048f9b7f67e1253c910b4e9823eeb 430 Gene3D G3DSA:3.30.70.1170 170 227 2.5E-11 T 29-03-2018 CVS42_RS21080 5f3048f9b7f67e1253c910b4e9823eeb 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 315 327 2.3E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS21080 5f3048f9b7f67e1253c910b4e9823eeb 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 2.3E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS21080 5f3048f9b7f67e1253c910b4e9823eeb 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 365 381 2.3E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS21080 5f3048f9b7f67e1253c910b4e9823eeb 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 2.3E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS21080 5f3048f9b7f67e1253c910b4e9823eeb 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 412 429 2.3E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS21080 5f3048f9b7f67e1253c910b4e9823eeb 430 Gene3D G3DSA:1.10.287.730 143 169 4.1E-10 T 29-03-2018 CVS42_RS21080 5f3048f9b7f67e1253c910b4e9823eeb 430 Pfam PF01029 NusB family 1 123 2.5E-27 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CVS42_RS21080 5f3048f9b7f67e1253c910b4e9823eeb 430 SUPERFAMILY SSF48013 1 146 4.19E-37 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CVS42_RS20835 e8ec26fcc25340e8b12efa16480a63d5 178 Pfam PF10063 Uncharacterized integral membrane protein (DUF2301) 96 175 1.5E-11 T 29-03-2018 IPR019275 Protein of unknown function DUF2301 CVS42_RS18485 64a254b56a9703a9c2910366dfd0e289 310 Gene3D G3DSA:3.40.190.10 99 190 1.2E-12 T 29-03-2018 CVS42_RS18485 64a254b56a9703a9c2910366dfd0e289 310 SUPERFAMILY SSF46785 8 88 1.2E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18485 64a254b56a9703a9c2910366dfd0e289 310 Gene3D G3DSA:1.10.10.10 1 92 9.6E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18485 64a254b56a9703a9c2910366dfd0e289 310 Gene3D G3DSA:3.40.190.10 191 275 1.5E-11 T 29-03-2018 CVS42_RS18485 64a254b56a9703a9c2910366dfd0e289 310 SUPERFAMILY SSF53850 92 303 2.84E-34 T 29-03-2018 CVS42_RS18485 64a254b56a9703a9c2910366dfd0e289 310 Pfam PF03466 LysR substrate binding domain 95 301 2.4E-18 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS18485 64a254b56a9703a9c2910366dfd0e289 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.7E-13 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS11850 e49d8bc59e704db9045681606382b4d4 76 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 8 70 2.7E-28 T 29-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CVS42_RS11850 e49d8bc59e704db9045681606382b4d4 76 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 17 72 4.0E-17 T 29-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CVS42_RS01800 e64aa59340e18edc31fcea65c5c4f411 242 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 29 215 19.249 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CVS42_RS01800 e64aa59340e18edc31fcea65c5c4f411 242 SMART SM01207 32 207 3.2E-81 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CVS42_RS01800 e64aa59340e18edc31fcea65c5c4f411 242 Pfam PF02660 Glycerol-3-phosphate acyltransferase 33 206 5.8E-48 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CVS42_RS01800 e64aa59340e18edc31fcea65c5c4f411 242 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 23 215 6.8E-68 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 Gene3D G3DSA:3.40.50.880 1046 1300 2.2E-31 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 SUPERFAMILY SSF56042 833 1041 4.64E-57 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 SUPERFAMILY SSF82697 2 158 7.85E-50 T 29-03-2018 CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 SUPERFAMILY SSF55326 625 822 1.26E-67 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 SUPERFAMILY SSF55326 227 434 4.88E-65 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 SMART SM01211 1047 1302 1.6E-155 T 29-03-2018 CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 Gene3D G3DSA:3.30.1330.10 189 223 0.0041 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 Gene3D G3DSA:3.30.1330.10 224 431 6.5E-50 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 Gene3D G3DSA:3.30.1330.10 621 819 9.3E-20 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1303 21.467 T 29-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 Gene3D G3DSA:3.90.650.10 432 615 6.9E-30 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 Gene3D G3DSA:3.90.650.10 826 1002 4.5E-32 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 SUPERFAMILY SSF109736 161 226 1.12E-21 T 29-03-2018 CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 Pfam PF02769 AIR synthase related protein, C-terminal domain 843 970 1.4E-13 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 Pfam PF02769 AIR synthase related protein, C-terminal domain 438 594 2.4E-29 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 SUPERFAMILY SSF52317 1044 1299 4.38E-96 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1048 1299 1.1E-103 T 29-03-2018 CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1300 0.0 T 29-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CVS42_RS07720 84573ba88626195342e9020d04d837ae 1303 SUPERFAMILY SSF56042 438 621 1.64E-53 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS14445 cb98c079dd0e1c9183c6168a97d605f6 439 Pfam PF00535 Glycosyl transferase family 2 188 356 2.8E-27 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CVS42_RS14445 cb98c079dd0e1c9183c6168a97d605f6 439 SUPERFAMILY SSF53448 184 433 5.06E-50 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS14445 cb98c079dd0e1c9183c6168a97d605f6 439 SUPERFAMILY SSF53756 14 125 1.83E-12 T 29-03-2018 CVS42_RS14445 cb98c079dd0e1c9183c6168a97d605f6 439 Gene3D G3DSA:3.90.550.10 162 435 1.3E-47 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS14445 cb98c079dd0e1c9183c6168a97d605f6 439 Gene3D G3DSA:3.40.50.2000 6 161 2.0E-16 T 29-03-2018 CVS42_RS14445 cb98c079dd0e1c9183c6168a97d605f6 439 Pfam PF13692 Glycosyl transferases group 1 18 124 2.0E-11 T 29-03-2018 CVS42_RS09050 eb4665706316c3778fc8e399d1028f64 300 Pfam PF00892 EamA-like transporter family 156 281 1.2E-8 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS09050 eb4665706316c3778fc8e399d1028f64 300 SUPERFAMILY SSF103481 44 144 6.93E-10 T 29-03-2018 CVS42_RS09050 eb4665706316c3778fc8e399d1028f64 300 SUPERFAMILY SSF103481 188 286 9.42E-16 T 29-03-2018 CVS42_RS09575 18bb079e4f73c244e246625dd5404d08 238 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 9 235 38.244 T 29-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CVS42_RS09575 18bb079e4f73c244e246625dd5404d08 238 Gene3D G3DSA:3.40.50.150 1 235 1.0E-49 T 29-03-2018 CVS42_RS09575 18bb079e4f73c244e246625dd5404d08 238 Pfam PF13489 Methyltransferase domain 52 201 5.8E-26 T 29-03-2018 CVS42_RS09575 18bb079e4f73c244e246625dd5404d08 238 SUPERFAMILY SSF53335 13 235 1.5E-48 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS09575 18bb079e4f73c244e246625dd5404d08 238 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 1.7E-86 T 29-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CVS42_RS15400 baacfff654d5211ab5eae15a9eb5c1ce 353 SUPERFAMILY SSF111369 55 272 4.84E-39 T 29-03-2018 CVS42_RS15400 baacfff654d5211ab5eae15a9eb5c1ce 353 Gene3D G3DSA:1.20.1600.10 109 281 9.5E-21 T 29-03-2018 CVS42_RS15400 baacfff654d5211ab5eae15a9eb5c1ce 353 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 346 1.5E-74 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CVS42_RS15400 baacfff654d5211ab5eae15a9eb5c1ce 353 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 266 2.3E-30 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CVS42_RS15400 baacfff654d5211ab5eae15a9eb5c1ce 353 Gene3D G3DSA:3.90.1170.30 28 108 5.3E-5 T 29-03-2018 CVS42_RS00030 8c1b8492663ce9598b0fca9369ccd48a 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 29-03-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS00030 8c1b8492663ce9598b0fca9369ccd48a 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.669 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS00030 8c1b8492663ce9598b0fca9369ccd48a 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 2 26 1.0E-6 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS00030 8c1b8492663ce9598b0fca9369ccd48a 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 5.7E-27 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS00030 8c1b8492663ce9598b0fca9369ccd48a 44 Pfam PF00468 Ribosomal protein L34 1 44 2.3E-25 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS13905 dc2a26f11e699679845723ef1e74447c 174 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CVS42_RS13905 dc2a26f11e699679845723ef1e74447c 174 Gene3D G3DSA:3.40.50.360 1 170 1.7E-36 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS13905 dc2a26f11e699679845723ef1e74447c 174 PIRSF PIRSF038996 1 172 2.0E-65 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CVS42_RS13905 dc2a26f11e699679845723ef1e74447c 174 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 1.7E-69 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CVS42_RS13905 dc2a26f11e699679845723ef1e74447c 174 Pfam PF00258 Flavodoxin 6 160 1.0E-28 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CVS42_RS13905 dc2a26f11e699679845723ef1e74447c 174 SUPERFAMILY SSF52218 4 169 2.31E-52 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS07705 397d8f502aa76c30759cfa94929d1710 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 3 72 4.0E-13 T 29-03-2018 IPR010807 Protein of unknown function DUF1407 CVS42_RS07705 397d8f502aa76c30759cfa94929d1710 74 Gene3D G3DSA:2.10.290.10 2 72 4.0E-5 T 29-03-2018 CVS42_RS07705 397d8f502aa76c30759cfa94929d1710 74 SUPERFAMILY SSF161187 4 70 3.79E-25 T 29-03-2018 IPR029037 YfgJ-like CVS42_RS07705 397d8f502aa76c30759cfa94929d1710 74 Pfam PF07191 zinc-ribbons 5 70 1.7E-25 T 29-03-2018 IPR010807 Protein of unknown function DUF1407 CVS42_RS04260 914476434be1f0b446295d3a366af36c 393 Pfam PF00155 Aminotransferase class I and II 43 385 2.8E-37 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CVS42_RS04260 914476434be1f0b446295d3a366af36c 393 Gene3D G3DSA:3.90.1150.10 268 393 4.8E-38 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS04260 914476434be1f0b446295d3a366af36c 393 Gene3D G3DSA:3.40.640.10 54 267 1.8E-37 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS04260 914476434be1f0b446295d3a366af36c 393 SUPERFAMILY SSF53383 2 392 8.27E-108 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS11565 eed9615518b8e7dca864d4119adf8fec 351 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 348 6.9E-170 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CVS42_RS11565 eed9615518b8e7dca864d4119adf8fec 351 Pfam PF00793 DAHP synthetase I family 41 337 1.9E-106 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CVS42_RS11565 eed9615518b8e7dca864d4119adf8fec 351 PIRSF PIRSF001361 1 351 5.0E-163 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CVS42_RS11565 eed9615518b8e7dca864d4119adf8fec 351 Gene3D G3DSA:3.20.20.70 8 351 1.1E-134 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS11565 eed9615518b8e7dca864d4119adf8fec 351 SUPERFAMILY SSF51569 7 347 3.24E-140 T 29-03-2018 CVS42_RS00335 4a1eb959eff1b9b78096fa4e66b056b4 551 SUPERFAMILY SSF55874 408 544 3.01E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00335 4a1eb959eff1b9b78096fa4e66b056b4 551 Gene3D G3DSA:3.30.565.10 407 548 5.1E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00335 4a1eb959eff1b9b78096fa4e66b056b4 551 SUPERFAMILY SSF55781 222 340 5.89E-7 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS00335 4a1eb959eff1b9b78096fa4e66b056b4 551 Pfam PF07694 5TMR of 5TMR-LYT 23 187 1.3E-43 T 29-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CVS42_RS00335 4a1eb959eff1b9b78096fa4e66b056b4 551 Gene3D G3DSA:3.30.450.40 218 364 2.1E-5 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS00335 4a1eb959eff1b9b78096fa4e66b056b4 551 Pfam PF06580 Histidine kinase 354 432 2.7E-26 T 29-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CVS42_RS00335 4a1eb959eff1b9b78096fa4e66b056b4 551 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 450 546 6.1E-6 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00335 4a1eb959eff1b9b78096fa4e66b056b4 551 SMART SM00387 445 547 3.5E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS09720 08224cc4cf4b3096b2cd7731bc2d0881 256 Gene3D G3DSA:1.10.3720.10 1 255 1.1E-37 T 29-03-2018 CVS42_RS09720 08224cc4cf4b3096b2cd7731bc2d0881 256 SUPERFAMILY SSF161098 3 254 4.11E-54 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS09720 08224cc4cf4b3096b2cd7731bc2d0881 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 250 1.6E-16 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS20360 4dda009cdcaf721c6fc12b7d57795f86 569 ProSitePatterns PS01233 Urocanase signature. 446 461 - T 29-03-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CVS42_RS20360 4dda009cdcaf721c6fc12b7d57795f86 569 Hamap MF_00577 Urocanate hydratase [hutU]. 9 560 49.966 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CVS42_RS20360 4dda009cdcaf721c6fc12b7d57795f86 569 Gene3D G3DSA:3.40.1770.10 200 559 5.3E-165 T 29-03-2018 CVS42_RS20360 4dda009cdcaf721c6fc12b7d57795f86 569 Gene3D G3DSA:3.40.1770.10 14 156 3.6E-30 T 29-03-2018 CVS42_RS20360 4dda009cdcaf721c6fc12b7d57795f86 569 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 558 1.7E-294 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CVS42_RS20360 4dda009cdcaf721c6fc12b7d57795f86 569 SUPERFAMILY SSF111326 9 559 8.37E-263 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CVS42_RS20360 4dda009cdcaf721c6fc12b7d57795f86 569 Pfam PF01175 Urocanase Rossmann-like domain 145 353 5.4E-87 T 29-03-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CVS42_RS20360 4dda009cdcaf721c6fc12b7d57795f86 569 Pfam PF17391 Urocanase N-terminal domain 16 142 4.5E-63 T 29-03-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CVS42_RS20360 4dda009cdcaf721c6fc12b7d57795f86 569 Pfam PF17392 Urocanase C-terminal domain 356 550 6.0E-92 T 29-03-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CVS42_RS20360 4dda009cdcaf721c6fc12b7d57795f86 569 PIRSF PIRSF001423 1 564 8.9E-296 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CVS42_RS08390 d9d10fa9c5da9232488b480dca1808c2 387 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 194 208 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CVS42_RS08390 d9d10fa9c5da9232488b480dca1808c2 387 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 384 3.8E-135 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CVS42_RS08390 d9d10fa9c5da9232488b480dca1808c2 387 Gene3D G3DSA:3.90.1150.10 254 387 3.0E-49 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS08390 d9d10fa9c5da9232488b480dca1808c2 387 SUPERFAMILY SSF53383 22 386 4.35E-115 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS08390 d9d10fa9c5da9232488b480dca1808c2 387 PIRSF PIRSF001434 1 387 7.4E-137 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CVS42_RS08390 d9d10fa9c5da9232488b480dca1808c2 387 Gene3D G3DSA:3.40.640.10 1 252 5.2E-56 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 Gene3D G3DSA:1.20.120.160 844 939 6.5E-9 T 29-03-2018 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 Pfam PF00072 Response regulator receiver domain 696 810 1.0E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 675 7.0E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 Pfam PF00512 His Kinase A (phospho-acceptor) domain 448 512 6.0E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 SMART SM00387 559 676 3.0E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 Gene3D G3DSA:1.10.287.130 437 506 2.8E-20 T 29-03-2018 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 SMART SM00388 447 512 3.5E-23 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 PIRSF PIRSF036437 4 939 4.0E-240 T 29-03-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 Pfam PF00672 HAMP domain 355 400 3.0E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 SUPERFAMILY SSF52172 693 817 7.26E-32 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 SUPERFAMILY SSF47226 832 927 9.55E-11 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 SMART SM00304 350 404 9.6E-4 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 Gene3D G3DSA:3.40.50.2300 677 826 4.0E-32 T 29-03-2018 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 Gene3D G3DSA:3.30.565.10 507 676 2.4E-44 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 SUPERFAMILY SSF55874 501 675 1.7E-44 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 Pfam PF01627 Hpt domain 870 932 8.4E-6 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 SMART SM00448 694 810 7.6E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 630 6.2E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 673 6.2E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 616 6.2E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 636 654 6.2E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 SUPERFAMILY SSF47384 434 513 3.73E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS16790 036852ea08ed27e9e44aaec91642fce7 941 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 6 917 6.4E-252 T 29-03-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 CVS42_RS17090 1537c790d0c4a31707599995215ab78b 181 Gene3D G3DSA:3.30.420.10 2 181 2.9E-25 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS17090 1537c790d0c4a31707599995215ab78b 181 SUPERFAMILY SSF53098 5 180 4.21E-45 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS17090 1537c790d0c4a31707599995215ab78b 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 41.953 T 29-03-2018 IPR022894 Oligoribonuclease GO:0000175 CVS42_RS17090 1537c790d0c4a31707599995215ab78b 181 Pfam PF00929 Exonuclease 9 170 2.7E-36 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CVS42_RS17090 1537c790d0c4a31707599995215ab78b 181 SMART SM00479 7 180 9.3E-17 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CVS42_RS16190 242b538ffb28da7d8b7e3c2353f1a653 128 Pfam PF04241 Protein of unknown function (DUF423) 21 106 4.9E-26 T 29-03-2018 IPR006696 Protein of unknown function DUF423 CVS42_RS21885 f292b7ba4ca8901d27d52e433f46f19e 232 SUPERFAMILY SSF63380 3 97 1.59E-19 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CVS42_RS21885 f292b7ba4ca8901d27d52e433f46f19e 232 SUPERFAMILY SSF52343 100 230 6.16E-34 T 29-03-2018 CVS42_RS21885 f292b7ba4ca8901d27d52e433f46f19e 232 Pfam PF00970 Oxidoreductase FAD-binding domain 20 96 1.2E-4 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CVS42_RS21885 f292b7ba4ca8901d27d52e433f46f19e 232 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 3.7E-19 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CVS42_RS21885 f292b7ba4ca8901d27d52e433f46f19e 232 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 6.1E-14 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CVS42_RS21885 f292b7ba4ca8901d27d52e433f46f19e 232 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 6.1E-14 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CVS42_RS21885 f292b7ba4ca8901d27d52e433f46f19e 232 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 6.1E-14 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CVS42_RS21885 f292b7ba4ca8901d27d52e433f46f19e 232 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 6.1E-14 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CVS42_RS21885 f292b7ba4ca8901d27d52e433f46f19e 232 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 6.1E-14 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CVS42_RS21885 f292b7ba4ca8901d27d52e433f46f19e 232 Gene3D G3DSA:3.40.50.80 88 226 8.3E-22 T 29-03-2018 CVS42_RS21885 f292b7ba4ca8901d27d52e433f46f19e 232 Gene3D G3DSA:2.40.30.10 2 87 5.8E-14 T 29-03-2018 CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 3.6E-16 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.299 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 Gene3D G3DSA:3.40.50.300 75 203 7.3E-32 T 29-03-2018 CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 Gene3D G3DSA:2.40.30.10 206 299 1.1E-30 T 29-03-2018 CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 SUPERFAMILY SSF52540 9 226 2.17E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 Gene3D G3DSA:3.40.50.300 2 74 1.5E-11 T 29-03-2018 CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 2.3E-14 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 4.8E-234 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 SUPERFAMILY SSF50447 205 301 8.44E-29 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 Gene3D G3DSA:2.40.30.10 300 393 7.7E-33 T 29-03-2018 CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.3E-25 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.3E-25 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.3E-25 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.3E-25 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.3E-25 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.8E-33 T 29-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 6.7E-58 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 SUPERFAMILY SSF50465 298 393 1.15E-35 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CVS42_RS20585 16009f23399f0c9232be0fb40cca9c15 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 SUPERFAMILY SSF47226 764 777 2.49E-17 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 SUPERFAMILY SSF47226 805 901 2.49E-17 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 Gene3D G3DSA:1.20.120.160 804 913 1.1E-13 T 29-03-2018 CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 SMART SM00448 521 636 3.2E-15 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 SMART SM00448 668 781 3.5E-34 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 Pfam PF01627 Hpt domain 827 906 1.9E-7 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 SUPERFAMILY SSF52172 521 649 5.69E-23 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 Pfam PF00072 Response regulator receiver domain 670 779 2.2E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 Pfam PF00072 Response regulator receiver domain 523 636 1.5E-14 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 Gene3D G3DSA:1.10.287.130 265 340 3.0E-18 T 29-03-2018 CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 SUPERFAMILY SSF47384 271 345 1.61E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 Gene3D G3DSA:3.40.50.2300 665 797 1.7E-39 T 29-03-2018 CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 SUPERFAMILY SSF52172 666 785 1.2E-36 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 Gene3D G3DSA:3.30.565.10 348 509 2.7E-48 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 444 9.6E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 483 9.6E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 458 9.6E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 502 9.6E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 503 3.5E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 Gene3D G3DSA:3.40.50.2300 515 652 1.9E-21 T 29-03-2018 CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 SMART SM00387 391 505 2.0E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 SMART SM00388 279 344 1.2E-24 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 SUPERFAMILY SSF55874 333 503 4.98E-45 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS08510 6d54c777f0013b148d606f6904810eb3 934 Pfam PF00512 His Kinase A (phospho-acceptor) domain 279 344 1.1E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS06040 be8cb1ac156620d1f808aa5ac0b52f2b 165 TIGRFAM TIGR00608 radc: DNA repair protein RadC 27 165 3.7E-41 T 29-03-2018 IPR001405 RadC protein CVS42_RS06040 be8cb1ac156620d1f808aa5ac0b52f2b 165 Pfam PF04002 RadC-like JAB domain 44 163 1.1E-39 T 29-03-2018 IPR025657 RadC-like JAB domain CVS42_RS06040 be8cb1ac156620d1f808aa5ac0b52f2b 165 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 114 119 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CVS42_RS06040 be8cb1ac156620d1f808aa5ac0b52f2b 165 Gene3D G3DSA:3.40.140.10 40 165 1.1E-42 T 29-03-2018 CVS42_RS05050 87b394e8265d28d1700ca6841121f121 418 Gene3D G3DSA:3.90.170.10 266 418 7.8E-48 T 29-03-2018 CVS42_RS05050 87b394e8265d28d1700ca6841121f121 418 SMART SM00788 3 417 1.3E-171 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CVS42_RS05050 87b394e8265d28d1700ca6841121f121 418 Gene3D G3DSA:3.40.440.10 1 160 5.6E-42 T 29-03-2018 CVS42_RS05050 87b394e8265d28d1700ca6841121f121 418 Gene3D G3DSA:3.40.440.10 168 265 3.6E-5 T 29-03-2018 CVS42_RS05050 87b394e8265d28d1700ca6841121f121 418 SUPERFAMILY SSF52540 1 417 8.29E-118 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS05050 87b394e8265d28d1700ca6841121f121 418 Pfam PF00709 Adenylosuccinate synthetase 4 416 3.1E-127 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CVS42_RS05050 87b394e8265d28d1700ca6841121f121 418 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 418 138.28 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CVS42_RS00500 3c859c313a7f1b8f0d398b8569f50846 273 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 216 257 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CVS42_RS00500 3c859c313a7f1b8f0d398b8569f50846 273 Gene3D G3DSA:1.10.10.60 166 220 1.8E-12 T 29-03-2018 CVS42_RS00500 3c859c313a7f1b8f0d398b8569f50846 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 6.2E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS00500 3c859c313a7f1b8f0d398b8569f50846 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 6.2E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS00500 3c859c313a7f1b8f0d398b8569f50846 273 Gene3D G3DSA:2.60.120.280 11 157 1.7E-8 T 29-03-2018 CVS42_RS00500 3c859c313a7f1b8f0d398b8569f50846 273 SUPERFAMILY SSF46689 215 265 3.72E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS00500 3c859c313a7f1b8f0d398b8569f50846 273 Gene3D G3DSA:1.10.10.60 221 271 4.5E-13 T 29-03-2018 CVS42_RS00500 3c859c313a7f1b8f0d398b8569f50846 273 Pfam PF12833 Helix-turn-helix domain 185 262 1.9E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS00500 3c859c313a7f1b8f0d398b8569f50846 273 SUPERFAMILY SSF46689 162 213 4.3E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS00500 3c859c313a7f1b8f0d398b8569f50846 273 SMART SM00342 179 261 1.8E-28 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS00500 3c859c313a7f1b8f0d398b8569f50846 273 Pfam PF02311 AraC-like ligand binding domain 17 147 2.1E-16 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CVS42_RS00500 3c859c313a7f1b8f0d398b8569f50846 273 SUPERFAMILY SSF51215 25 151 2.62E-16 T 29-03-2018 CVS42_RS03135 d34b74f39312cc75bce38fc411a3db37 815 SUPERFAMILY SSF52540 13 434 6.0E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS03135 d34b74f39312cc75bce38fc411a3db37 815 PIRSF PIRSF005496 1 814 9.7E-301 T 29-03-2018 CVS42_RS03135 d34b74f39312cc75bce38fc411a3db37 815 Pfam PF00270 DEAD/DEAH box helicase 19 163 7.7E-8 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CVS42_RS03135 d34b74f39312cc75bce38fc411a3db37 815 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 812 0.0 T 29-03-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 CVS42_RS03135 d34b74f39312cc75bce38fc411a3db37 815 Gene3D G3DSA:3.40.50.300 180 349 2.0E-46 T 29-03-2018 CVS42_RS03135 d34b74f39312cc75bce38fc411a3db37 815 Pfam PF00271 Helicase conserved C-terminal domain 208 328 7.7E-13 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS03135 d34b74f39312cc75bce38fc411a3db37 815 SMART SM00487 2 188 7.8E-15 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS03135 d34b74f39312cc75bce38fc411a3db37 815 SMART SM00490 226 328 2.0E-18 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS03135 d34b74f39312cc75bce38fc411a3db37 815 Pfam PF08482 ATP-dependent helicase C-terminal 668 800 6.8E-51 T 29-03-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal CVS42_RS03135 d34b74f39312cc75bce38fc411a3db37 815 SMART SM00847 387 476 1.3E-11 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 CVS42_RS03135 d34b74f39312cc75bce38fc411a3db37 815 Gene3D G3DSA:3.40.50.300 3 162 1.9E-21 T 29-03-2018 CVS42_RS03135 d34b74f39312cc75bce38fc411a3db37 815 Pfam PF04408 Helicase associated domain (HA2) 388 452 4.7E-11 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 CVS42_RS08425 389e716ec3c247712d63be88dab1ed7a 299 Gene3D G3DSA:2.60.120.10 2 258 8.3E-55 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS08425 389e716ec3c247712d63be88dab1ed7a 299 Pfam PF05726 Pirin C-terminal cupin domain 176 285 2.0E-19 T 29-03-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 CVS42_RS08425 389e716ec3c247712d63be88dab1ed7a 299 SUPERFAMILY SSF51182 30 289 2.26E-55 T 29-03-2018 IPR011051 RmlC-like cupin domain CVS42_RS08425 389e716ec3c247712d63be88dab1ed7a 299 PIRSF PIRSF006232 6 291 1.3E-57 T 29-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CVS42_RS08425 389e716ec3c247712d63be88dab1ed7a 299 Pfam PF02678 Pirin 40 120 8.4E-15 T 29-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CVS42_RS13635 df84c80eeb0c02bfcb2853977f8c1d85 180 Gene3D G3DSA:3.60.21.10 1 162 5.7E-28 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS13635 df84c80eeb0c02bfcb2853977f8c1d85 180 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 159 6.9E-24 T 29-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 CVS42_RS13635 df84c80eeb0c02bfcb2853977f8c1d85 180 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 166 1.4E-24 T 29-03-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 CVS42_RS13635 df84c80eeb0c02bfcb2853977f8c1d85 180 SUPERFAMILY SSF56300 1 161 2.73E-36 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS10810 98114613275532e85390fb2c3bb953d4 701 Gene3D G3DSA:3.10.560.10 478 575 2.2E-13 T 29-03-2018 CVS42_RS10810 98114613275532e85390fb2c3bb953d4 701 Gene3D G3DSA:3.10.560.10 578 672 3.5E-20 T 29-03-2018 CVS42_RS10810 98114613275532e85390fb2c3bb953d4 701 Gene3D G3DSA:3.10.560.10 95 180 4.0E-15 T 29-03-2018 CVS42_RS10810 98114613275532e85390fb2c3bb953d4 701 Gene3D G3DSA:3.10.560.10 202 284 1.6E-13 T 29-03-2018 CVS42_RS10810 98114613275532e85390fb2c3bb953d4 701 Gene3D G3DSA:3.10.560.10 379 474 6.9E-13 T 29-03-2018 CVS42_RS10810 98114613275532e85390fb2c3bb953d4 701 Gene3D G3DSA:3.10.560.10 285 374 1.8E-17 T 29-03-2018 CVS42_RS10810 98114613275532e85390fb2c3bb953d4 701 Pfam PF10531 SLBB domain 296 348 9.4E-9 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10810 98114613275532e85390fb2c3bb953d4 701 Pfam PF10531 SLBB domain 102 148 5.2E-7 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10810 98114613275532e85390fb2c3bb953d4 701 Pfam PF10531 SLBB domain 494 541 5.7E-4 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10810 98114613275532e85390fb2c3bb953d4 701 Pfam PF10531 SLBB domain 208 250 9.9E-7 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10810 98114613275532e85390fb2c3bb953d4 701 Pfam PF10531 SLBB domain 391 434 1.2E-7 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10810 98114613275532e85390fb2c3bb953d4 701 Pfam PF10531 SLBB domain 589 635 7.6E-10 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10810 98114613275532e85390fb2c3bb953d4 701 Pfam PF02563 Polysaccharide biosynthesis/export protein 25 95 1.1E-11 T 29-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 CVS42_RS10810 98114613275532e85390fb2c3bb953d4 701 Gene3D G3DSA:3.30.1950.10 29 94 7.4E-11 T 29-03-2018 CVS42_RS04910 56fdcef7b14a4c97a92027ce8aa0653e 610 Pfam PF02080 TrkA-C domain 326 393 2.2E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS04910 56fdcef7b14a4c97a92027ce8aa0653e 610 Pfam PF02080 TrkA-C domain 231 297 4.1E-12 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS04910 56fdcef7b14a4c97a92027ce8aa0653e 610 SUPERFAMILY SSF116726 232 289 1.83E-7 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS04910 56fdcef7b14a4c97a92027ce8aa0653e 610 Pfam PF03600 Citrate transporter 17 555 3.2E-56 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CVS42_RS04910 56fdcef7b14a4c97a92027ce8aa0653e 610 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 558 574 - T 29-03-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 CVS42_RS04910 56fdcef7b14a4c97a92027ce8aa0653e 610 Gene3D G3DSA:3.30.70.1450 322 398 6.3E-16 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS04910 56fdcef7b14a4c97a92027ce8aa0653e 610 SUPERFAMILY SSF116726 321 393 7.32E-16 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS04910 56fdcef7b14a4c97a92027ce8aa0653e 610 Gene3D G3DSA:3.30.70.1450 224 308 1.0E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS14605 ce837cefb08132ee1bb2734f2ee247a2 442 SUPERFAMILY SSF102114 120 372 2.09E-55 T 29-03-2018 CVS42_RS14605 ce837cefb08132ee1bb2734f2ee247a2 442 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 9 437 2.1E-189 T 29-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CVS42_RS14605 ce837cefb08132ee1bb2734f2ee247a2 442 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CVS42_RS14605 ce837cefb08132ee1bb2734f2ee247a2 442 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 440 62.643 T 29-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CVS42_RS14605 ce837cefb08132ee1bb2734f2ee247a2 442 Gene3D G3DSA:2.40.50.140 380 442 6.0E-23 T 29-03-2018 CVS42_RS14605 ce837cefb08132ee1bb2734f2ee247a2 442 Gene3D G3DSA:3.80.30.20 137 379 9.4E-48 T 29-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe CVS42_RS14605 ce837cefb08132ee1bb2734f2ee247a2 442 SMART SM00729 140 365 6.6E-57 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CVS42_RS14605 ce837cefb08132ee1bb2734f2ee247a2 442 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 438 4.6E-109 T 29-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CVS42_RS14605 ce837cefb08132ee1bb2734f2ee247a2 442 Pfam PF00919 Uncharacterized protein family UPF0004 9 95 2.9E-21 T 29-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CVS42_RS14605 ce837cefb08132ee1bb2734f2ee247a2 442 Pfam PF04055 Radical SAM superfamily 146 323 4.3E-32 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS10885 b3d435fad070cb363180d0425698f00a 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 9.3E-28 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CVS42_RS10885 b3d435fad070cb363180d0425698f00a 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CVS42_RS10885 b3d435fad070cb363180d0425698f00a 380 SUPERFAMILY SSF47203 227 378 7.73E-50 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CVS42_RS10885 b3d435fad070cb363180d0425698f00a 380 Gene3D G3DSA:2.40.110.10 119 218 7.5E-43 T 29-03-2018 CVS42_RS10885 b3d435fad070cb363180d0425698f00a 380 PIRSF PIRSF016578 128 380 2.4E-12 T 29-03-2018 CVS42_RS10885 b3d435fad070cb363180d0425698f00a 380 PIRSF PIRSF016578 1 103 0.035 T 29-03-2018 CVS42_RS10885 b3d435fad070cb363180d0425698f00a 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 116 7.3E-35 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CVS42_RS10885 b3d435fad070cb363180d0425698f00a 380 Gene3D G3DSA:1.10.540.10 1 118 4.4E-38 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CVS42_RS10885 b3d435fad070cb363180d0425698f00a 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CVS42_RS10885 b3d435fad070cb363180d0425698f00a 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 375 1.5E-44 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CVS42_RS10885 b3d435fad070cb363180d0425698f00a 380 SUPERFAMILY SSF56645 2 240 6.28E-87 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CVS42_RS10885 b3d435fad070cb363180d0425698f00a 380 Gene3D G3DSA:1.20.140.10 219 380 5.6E-58 T 29-03-2018 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 Pfam PF08264 Anticodon-binding domain of tRNA 701 855 2.0E-27 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 SUPERFAMILY SSF52374 408 663 8.34E-134 T 29-03-2018 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 SUPERFAMILY SSF52374 3 202 8.34E-134 T 29-03-2018 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 656 9.6E-218 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 Gene3D G3DSA:3.40.50.620 43 122 3.9E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 1.1E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 1.1E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 1.1E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 542 555 1.1E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 577 586 1.1E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 859 3.6E-293 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 Gene3D G3DSA:1.10.730.10 624 810 1.9E-42 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 Gene3D G3DSA:3.90.740.10 195 401 4.0E-65 T 29-03-2018 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 Gene3D G3DSA:3.30.2320.20 819 911 9.4E-22 T 29-03-2018 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 SUPERFAMILY SSF47323 668 944 1.87E-76 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 Pfam PF06827 Zinc finger found in FPG and IleRS 915 941 2.3E-6 T 29-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 944 21.445 T 29-03-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 SUPERFAMILY SSF50677 204 408 4.71E-52 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CVS42_RS18145 5e008bd62cd23ced1594c7bc5f847121 953 Gene3D G3DSA:3.40.50.620 402 623 7.1E-52 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS12615 331e7acb46bcae4f291c04b5cd1c063e 155 SUPERFAMILY SSF54637 3 151 8.36E-43 T 29-03-2018 IPR029069 HotDog domain CVS42_RS12615 331e7acb46bcae4f291c04b5cd1c063e 155 Gene3D G3DSA:3.10.129.10 1 155 4.1E-39 T 29-03-2018 CVS42_RS12615 331e7acb46bcae4f291c04b5cd1c063e 155 Pfam PF03061 Thioesterase superfamily 20 93 3.8E-20 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CVS42_RS07570 6d2167be1560185aa0b38e7f814c3ab2 617 Gene3D G3DSA:1.20.1640.10 394 612 1.6E-29 T 29-03-2018 CVS42_RS07570 6d2167be1560185aa0b38e7f814c3ab2 617 Pfam PF13721 SecD export protein N-terminal TM region 2 103 4.3E-36 T 29-03-2018 IPR027398 SecD export protein N-terminal TM domain CVS42_RS07570 6d2167be1560185aa0b38e7f814c3ab2 617 Pfam PF07549 SecD/SecF GG Motif 116 140 8.0E-7 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CVS42_RS07570 6d2167be1560185aa0b38e7f814c3ab2 617 SUPERFAMILY SSF82866 412 607 2.35E-41 T 29-03-2018 CVS42_RS07570 6d2167be1560185aa0b38e7f814c3ab2 617 Pfam PF02355 Protein export membrane protein 435 603 3.2E-20 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CVS42_RS07570 6d2167be1560185aa0b38e7f814c3ab2 617 PRINTS PR00702 Acriflavin resistance protein family signature 580 603 1.6E-6 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS07570 6d2167be1560185aa0b38e7f814c3ab2 617 PRINTS PR00702 Acriflavin resistance protein family signature 505 529 1.6E-6 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS07570 6d2167be1560185aa0b38e7f814c3ab2 617 PRINTS PR00702 Acriflavin resistance protein family signature 451 474 1.6E-6 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS07570 6d2167be1560185aa0b38e7f814c3ab2 617 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 603 1.3E-147 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CVS42_RS07570 6d2167be1560185aa0b38e7f814c3ab2 617 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 347 596 4.6E-82 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CVS42_RS07570 6d2167be1560185aa0b38e7f814c3ab2 617 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 617 49.456 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CVS42_RS13095 0fe106d53ae56257ea3be821d3d81307 231 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 1 219 7.7E-37 T 29-03-2018 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 CVS42_RS13095 0fe106d53ae56257ea3be821d3d81307 231 SUPERFAMILY SSF110710 1 226 3.4E-44 T 29-03-2018 CVS42_RS20935 351eed8ed19699f409ddec4b09c68b84 290 Gene3D G3DSA:3.40.190.10 78 175 4.3E-16 T 29-03-2018 CVS42_RS20935 351eed8ed19699f409ddec4b09c68b84 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS20935 351eed8ed19699f409ddec4b09c68b84 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS20935 351eed8ed19699f409ddec4b09c68b84 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS20935 351eed8ed19699f409ddec4b09c68b84 290 Pfam PF03466 LysR substrate binding domain 87 287 9.8E-29 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS20935 351eed8ed19699f409ddec4b09c68b84 290 Gene3D G3DSA:1.10.10.10 2 77 3.6E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20935 351eed8ed19699f409ddec4b09c68b84 290 SUPERFAMILY SSF46785 2 109 9.28E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20935 351eed8ed19699f409ddec4b09c68b84 290 SUPERFAMILY SSF53850 88 288 2.84E-29 T 29-03-2018 CVS42_RS20935 351eed8ed19699f409ddec4b09c68b84 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 61 5.6E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS20935 351eed8ed19699f409ddec4b09c68b84 290 Gene3D G3DSA:3.40.190.10 176 257 1.0E-4 T 29-03-2018 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 Pfam PF05192 MutS domain III 284 573 3.7E-40 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 Pfam PF05190 MutS family domain IV 442 532 2.0E-29 T 29-03-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 Gene3D G3DSA:3.40.1170.10 11 146 8.8E-44 T 29-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 Gene3D G3DSA:1.10.1420.10 422 549 8.3E-31 T 29-03-2018 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 SMART SM00534 621 808 1.1E-120 T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 SUPERFAMILY SSF55271 15 130 5.23E-41 T 29-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 Gene3D G3DSA:3.30.420.110 147 277 1.7E-27 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 SUPERFAMILY SSF53150 129 281 9.42E-42 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 Gene3D G3DSA:3.40.50.300 581 820 3.4E-40 T 29-03-2018 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 Pfam PF01624 MutS domain I 23 134 2.3E-39 T 29-03-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 702 718 - T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 SMART SM00533 298 605 3.5E-103 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 22 861 0.0 T 29-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 Pfam PF05188 MutS domain II 143 268 1.2E-29 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 SUPERFAMILY SSF52540 581 812 2.36E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 22 855 25.222 T 29-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 Pfam PF00488 MutS domain V 624 811 4.6E-87 T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 Gene3D G3DSA:1.10.1420.10 278 421 3.5E-37 T 29-03-2018 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 PIRSF PIRSF037677 217 829 7.9E-129 T 29-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 PIRSF PIRSF037677 11 196 4.4E-24 T 29-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CVS42_RS19760 9381c3e1e2638afda4a2498a7592a9e9 863 SUPERFAMILY SSF48334 282 579 7.19E-87 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CVS42_RS03885 b99d2b33a4349848ff33319cdea490cc 325 Pfam PF03150 Di-haem cytochrome c peroxidase 33 181 1.1E-49 T 29-03-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CVS42_RS03885 b99d2b33a4349848ff33319cdea490cc 325 SUPERFAMILY SSF46626 16 169 1.75E-50 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS03885 b99d2b33a4349848ff33319cdea490cc 325 Pfam PF00034 Cytochrome c 189 299 1.5E-17 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS03885 b99d2b33a4349848ff33319cdea490cc 325 PIRSF PIRSF000294 17 323 2.0E-127 T 29-03-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 CVS42_RS03885 b99d2b33a4349848ff33319cdea490cc 325 SUPERFAMILY SSF46626 168 318 2.26E-43 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS03885 b99d2b33a4349848ff33319cdea490cc 325 Gene3D G3DSA:1.10.760.10 22 184 3.0E-43 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS03885 b99d2b33a4349848ff33319cdea490cc 325 Gene3D G3DSA:1.10.760.10 185 307 3.6E-19 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS17550 b648415d6f6aadcb0fc2c9ab5cd695c8 520 Gene3D G3DSA:3.20.20.70 1 332 1.5E-106 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS17550 b648415d6f6aadcb0fc2c9ab5cd695c8 520 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 3.7E-34 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CVS42_RS17550 b648415d6f6aadcb0fc2c9ab5cd695c8 520 SUPERFAMILY SSF110921 392 499 6.28E-23 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CVS42_RS17550 b648415d6f6aadcb0fc2c9ab5cd695c8 520 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 2.6E-238 T 29-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CVS42_RS17550 b648415d6f6aadcb0fc2c9ab5cd695c8 520 Pfam PF00682 HMGL-like 4 273 3.0E-96 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CVS42_RS17550 b648415d6f6aadcb0fc2c9ab5cd695c8 520 SMART SM00917 369 500 7.5E-35 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CVS42_RS17550 b648415d6f6aadcb0fc2c9ab5cd695c8 520 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.54 T 29-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CVS42_RS17550 b648415d6f6aadcb0fc2c9ab5cd695c8 520 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CVS42_RS17550 b648415d6f6aadcb0fc2c9ab5cd695c8 520 SUPERFAMILY SSF51569 1 291 7.33E-98 T 29-03-2018 CVS42_RS17550 b648415d6f6aadcb0fc2c9ab5cd695c8 520 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CVS42_RS14125 be2bf13ca5dff0c63cdc38b46849c07f 116 SUPERFAMILY SSF52833 3 114 7.23E-34 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS14125 be2bf13ca5dff0c63cdc38b46849c07f 116 Pfam PF03960 ArsC family 6 111 2.4E-15 T 29-03-2018 IPR006660 Arsenate reductase-like CVS42_RS14125 be2bf13ca5dff0c63cdc38b46849c07f 116 Gene3D G3DSA:3.40.30.10 2 115 1.4E-36 T 29-03-2018 CVS42_RS14125 be2bf13ca5dff0c63cdc38b46849c07f 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 7.2E-32 T 29-03-2018 IPR006504 Transcriptional regulator Spx/MgsR CVS42_RS20915 769765a46e79ef16ae983148c5c40b8e 300 Gene3D G3DSA:1.10.10.60 243 299 2.3E-10 T 29-03-2018 CVS42_RS20915 769765a46e79ef16ae983148c5c40b8e 300 Pfam PF06719 AraC-type transcriptional regulator N-terminus 26 174 1.6E-38 T 29-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal CVS42_RS20915 769765a46e79ef16ae983148c5c40b8e 300 Pfam PF12833 Helix-turn-helix domain 210 285 1.9E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS20915 769765a46e79ef16ae983148c5c40b8e 300 Gene3D G3DSA:1.10.10.60 139 242 1.0E-14 T 29-03-2018 CVS42_RS20915 769765a46e79ef16ae983148c5c40b8e 300 SUPERFAMILY SSF46689 188 238 1.1E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS20915 769765a46e79ef16ae983148c5c40b8e 300 SMART SM00342 204 287 6.1E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS20915 769765a46e79ef16ae983148c5c40b8e 300 SUPERFAMILY SSF46689 240 291 1.25E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 SUPERFAMILY SSF75615 112 201 4.05E-23 T 29-03-2018 CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 Gene3D G3DSA:3.40.50.720 3 118 7.1E-18 T 29-03-2018 CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 SUPERFAMILY SSF53790 212 453 8.77E-80 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 Gene3D G3DSA:3.40.1010.10 213 338 2.6E-36 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 214 447 6.9E-94 T 29-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 SUPERFAMILY SSF51735 1 111 1.61E-22 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 Pfam PF14824 Sirohaem biosynthesis protein central 117 143 7.7E-8 T 29-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 Gene3D G3DSA:3.30.950.10 339 468 1.7E-41 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 294 327 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 PIRSF PIRSF036426 1 464 1.5E-196 T 29-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 Pfam PF13241 Putative NAD(P)-binding 6 113 2.2E-26 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 216 426 2.3E-49 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 Gene3D G3DSA:3.30.160.110 119 146 7.5E-16 T 29-03-2018 CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 219 233 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 Gene3D G3DSA:1.10.8.210 149 207 5.3E-14 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 Hamap MF_01646 Siroheme synthase [cysG]. 1 456 51.872 T 29-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 203 4.9E-67 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS03015 f5a6a399f1a806b7aff2afdbf09cfde6 478 Pfam PF10414 Sirohaem synthase dimerisation region 148 204 2.1E-14 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS17015 70831e80f81a8f5d23efdb254b08fcaf 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS17015 70831e80f81a8f5d23efdb254b08fcaf 555 Gene3D G3DSA:3.40.50.300 290 555 7.1E-57 T 29-03-2018 CVS42_RS17015 70831e80f81a8f5d23efdb254b08fcaf 555 Pfam PF12848 ABC transporter 230 303 1.8E-11 T 29-03-2018 IPR032781 ABC-transporter extension domain CVS42_RS17015 70831e80f81a8f5d23efdb254b08fcaf 555 SUPERFAMILY SSF52540 11 243 6.66E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS17015 70831e80f81a8f5d23efdb254b08fcaf 555 SUPERFAMILY SSF52540 302 528 8.51E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS17015 70831e80f81a8f5d23efdb254b08fcaf 555 Gene3D G3DSA:3.40.50.300 12 289 3.4E-56 T 29-03-2018 CVS42_RS17015 70831e80f81a8f5d23efdb254b08fcaf 555 Pfam PF00005 ABC transporter 22 191 6.4E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS17015 70831e80f81a8f5d23efdb254b08fcaf 555 Pfam PF00005 ABC transporter 340 473 1.2E-23 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS17015 70831e80f81a8f5d23efdb254b08fcaf 555 SMART SM00382 31 236 2.3E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS17015 70831e80f81a8f5d23efdb254b08fcaf 555 SMART SM00382 348 521 1.1E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS17015 70831e80f81a8f5d23efdb254b08fcaf 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 1.6E-296 T 29-03-2018 IPR022374 ABC transporter, ATP-binding protein, ChvD CVS42_RS16760 0b95718a89c20cd388d74f85392a41cd 217 Gene3D G3DSA:2.40.30.20 1 89 6.6E-26 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS16760 0b95718a89c20cd388d74f85392a41cd 217 PIRSF PIRSF000498 1 211 3.8E-76 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS16760 0b95718a89c20cd388d74f85392a41cd 217 SUPERFAMILY SSF63380 1 89 2.21E-24 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CVS42_RS16760 0b95718a89c20cd388d74f85392a41cd 217 Gene3D G3DSA:2.40.30.20 94 191 5.3E-34 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS16760 0b95718a89c20cd388d74f85392a41cd 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 194 5.7E-62 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS16760 0b95718a89c20cd388d74f85392a41cd 217 SUPERFAMILY SSF63380 93 195 5.61E-33 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CVS42_RS16760 0b95718a89c20cd388d74f85392a41cd 217 Pfam PF00677 Lumazine binding domain 3 87 2.7E-21 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS16760 0b95718a89c20cd388d74f85392a41cd 217 Pfam PF00677 Lumazine binding domain 100 184 9.8E-26 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS20970 0f94b41e3f8f104b80a8a739bd67c476 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS20970 0f94b41e3f8f104b80a8a739bd67c476 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.6E-26 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS20970 0f94b41e3f8f104b80a8a739bd67c476 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 3.6E-26 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS20970 0f94b41e3f8f104b80a8a739bd67c476 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 3.6E-26 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS20970 0f94b41e3f8f104b80a8a739bd67c476 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 3.6E-26 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS20970 0f94b41e3f8f104b80a8a739bd67c476 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.7E-31 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS20970 0f94b41e3f8f104b80a8a739bd67c476 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 1.7E-31 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS20970 0f94b41e3f8f104b80a8a739bd67c476 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.7E-31 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS20970 0f94b41e3f8f104b80a8a739bd67c476 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 1.7E-31 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS20970 0f94b41e3f8f104b80a8a739bd67c476 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.7E-31 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS20970 0f94b41e3f8f104b80a8a739bd67c476 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 4.6E-133 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS20970 0f94b41e3f8f104b80a8a739bd67c476 334 Gene3D G3DSA:3.40.50.1370 167 334 2.6E-53 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS20970 0f94b41e3f8f104b80a8a739bd67c476 334 SUPERFAMILY SSF53671 4 333 1.57E-98 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS20970 0f94b41e3f8f104b80a8a739bd67c476 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 7.5E-44 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CVS42_RS20970 0f94b41e3f8f104b80a8a739bd67c476 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 85.29 T 29-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CVS42_RS20970 0f94b41e3f8f104b80a8a739bd67c476 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 5.1E-57 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CVS42_RS20970 0f94b41e3f8f104b80a8a739bd67c476 334 Gene3D G3DSA:3.40.50.1370 6 166 1.1E-52 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS18700 3ba284ba37c9b27a27771416ed6b13ae 191 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 62 177 9.8E-27 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CVS42_RS18700 3ba284ba37c9b27a27771416ed6b13ae 191 SUPERFAMILY SSF55846 14 189 3.8E-67 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CVS42_RS18700 3ba284ba37c9b27a27771416ed6b13ae 191 Gene3D G3DSA:3.40.80.10 11 191 1.8E-51 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CVS42_RS18700 3ba284ba37c9b27a27771416ed6b13ae 191 SMART SM00644 26 177 1.3E-50 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CVS42_RS04280 c4010bebd5bad8bfa94eb9886ebb60a6 431 SMART SM00450 143 264 1.9E-13 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS04280 c4010bebd5bad8bfa94eb9886ebb60a6 431 SMART SM00450 27 134 0.064 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS04280 c4010bebd5bad8bfa94eb9886ebb60a6 431 SMART SM00450 291 419 2.9E-10 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS04280 c4010bebd5bad8bfa94eb9886ebb60a6 431 Pfam PF00581 Rhodanese-like domain 167 258 1.3E-13 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS04280 c4010bebd5bad8bfa94eb9886ebb60a6 431 Pfam PF00581 Rhodanese-like domain 293 415 4.5E-10 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS04280 c4010bebd5bad8bfa94eb9886ebb60a6 431 Pfam PF00581 Rhodanese-like domain 35 127 2.9E-5 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS04280 c4010bebd5bad8bfa94eb9886ebb60a6 431 Gene3D G3DSA:3.40.250.10 281 431 2.4E-23 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS04280 c4010bebd5bad8bfa94eb9886ebb60a6 431 Gene3D G3DSA:3.40.250.10 22 140 1.0E-8 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS04280 c4010bebd5bad8bfa94eb9886ebb60a6 431 SUPERFAMILY SSF52821 162 318 1.7E-24 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS04280 c4010bebd5bad8bfa94eb9886ebb60a6 431 SUPERFAMILY SSF52821 284 429 7.86E-29 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS04280 c4010bebd5bad8bfa94eb9886ebb60a6 431 Gene3D G3DSA:3.40.250.10 141 280 7.6E-23 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS04280 c4010bebd5bad8bfa94eb9886ebb60a6 431 ProSitePatterns PS00380 Rhodanese signature 1. 178 189 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CVS42_RS04280 c4010bebd5bad8bfa94eb9886ebb60a6 431 SUPERFAMILY SSF52821 38 131 1.02E-10 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS06430 b3af2dee9d8c59941661ea644511306e 242 SUPERFAMILY SSF53850 25 240 4.69E-44 T 29-03-2018 CVS42_RS06430 b3af2dee9d8c59941661ea644511306e 242 PIRSF PIRSF004846 1 242 1.8E-34 T 29-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CVS42_RS06430 b3af2dee9d8c59941661ea644511306e 242 Gene3D G3DSA:3.40.190.10 113 204 4.7E-18 T 29-03-2018 CVS42_RS06430 b3af2dee9d8c59941661ea644511306e 242 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 32 231 2.9E-44 T 29-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CVS42_RS06430 b3af2dee9d8c59941661ea644511306e 242 Gene3D G3DSA:3.40.190.10 21 112 3.2E-13 T 29-03-2018 CVS42_RS06430 b3af2dee9d8c59941661ea644511306e 242 Pfam PF13531 Bacterial extracellular solute-binding protein 28 238 1.6E-28 T 29-03-2018 CVS42_RS18800 a241ccfe71b1d97c41ec83dec1ef5c8e 393 Pfam PF01098 Cell cycle protein 28 381 1.0E-111 T 29-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 CVS42_RS18800 a241ccfe71b1d97c41ec83dec1ef5c8e 393 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 23 390 41.401 T 29-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CVS42_RS18800 a241ccfe71b1d97c41ec83dec1ef5c8e 393 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 25 380 8.3E-127 T 29-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CVS42_RS18800 a241ccfe71b1d97c41ec83dec1ef5c8e 393 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 29-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CVS42_RS06545 be69c99caa641dfa77268fe7d1730abb 665 Gene3D G3DSA:3.30.1050.10 538 665 8.8E-31 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CVS42_RS06545 be69c99caa641dfa77268fe7d1730abb 665 SMART SM00849 136 359 9.4E-22 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS06545 be69c99caa641dfa77268fe7d1730abb 665 SUPERFAMILY SSF55718 544 665 7.53E-38 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CVS42_RS06545 be69c99caa641dfa77268fe7d1730abb 665 Pfam PF00753 Metallo-beta-lactamase superfamily 132 359 1.2E-29 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS06545 be69c99caa641dfa77268fe7d1730abb 665 Pfam PF14863 Alkyl sulfatase dimerisation 396 534 4.4E-57 T 29-03-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 CVS42_RS06545 be69c99caa641dfa77268fe7d1730abb 665 Pfam PF14864 Alkyl sulfatase C-terminal 543 665 2.7E-42 T 29-03-2018 IPR029229 Alkyl sulfatase, C-terminal CVS42_RS06545 be69c99caa641dfa77268fe7d1730abb 665 SUPERFAMILY SSF56281 34 536 1.35E-158 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS06545 be69c99caa641dfa77268fe7d1730abb 665 Gene3D G3DSA:3.60.15.10 109 410 1.0E-22 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS19165 3fa04a6c63ce847ee33fd88d131c04c7 379 Pfam PF01979 Amidohydrolase family 77 344 2.2E-9 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CVS42_RS19165 3fa04a6c63ce847ee33fd88d131c04c7 379 Gene3D G3DSA:3.20.20.140 60 318 7.6E-42 T 29-03-2018 CVS42_RS19165 3fa04a6c63ce847ee33fd88d131c04c7 379 TIGRFAM TIGR03583 EF_0837: putative amidohydrolase, EF_0837/AHA_3915 family 2 366 5.5E-173 T 29-03-2018 IPR020043 Amidohydrolase EF0837/AHA3915, putative CVS42_RS19165 3fa04a6c63ce847ee33fd88d131c04c7 379 SUPERFAMILY SSF51338 1 53 2.78E-19 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS19165 3fa04a6c63ce847ee33fd88d131c04c7 379 SUPERFAMILY SSF51338 319 366 2.78E-19 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS19165 3fa04a6c63ce847ee33fd88d131c04c7 379 PIRSF PIRSF039004 1 378 5.0E-137 T 29-03-2018 IPR020043 Amidohydrolase EF0837/AHA3915, putative CVS42_RS19165 3fa04a6c63ce847ee33fd88d131c04c7 379 Gene3D G3DSA:2.30.40.10 1 59 3.3E-8 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS19165 3fa04a6c63ce847ee33fd88d131c04c7 379 SUPERFAMILY SSF51556 53 318 2.46E-68 T 29-03-2018 IPR032466 Metal-dependent hydrolase CVS42_RS02860 72eab73a7c44e61b11b0f3fa8ee1d783 269 Gene3D G3DSA:3.90.20.10 44 150 1.1E-5 T 29-03-2018 CVS42_RS02860 72eab73a7c44e61b11b0f3fa8ee1d783 269 Pfam PF13432 Tetratricopeptide repeat 161 210 1.3E-6 T 29-03-2018 CVS42_RS02860 72eab73a7c44e61b11b0f3fa8ee1d783 269 Gene3D G3DSA:1.25.40.10 198 269 1.7E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS02860 72eab73a7c44e61b11b0f3fa8ee1d783 269 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 9 269 19.694 T 29-03-2018 IPR034706 Cell division coordinator CpoB GO:0051301 CVS42_RS02860 72eab73a7c44e61b11b0f3fa8ee1d783 269 Pfam PF13174 Tetratricopeptide repeat 224 256 8.0E-6 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS02860 72eab73a7c44e61b11b0f3fa8ee1d783 269 SUPERFAMILY SSF48452 143 258 3.23E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS02860 72eab73a7c44e61b11b0f3fa8ee1d783 269 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 148 266 3.3E-41 T 29-03-2018 IPR014162 Cell division coordinator CpoB, C-terminal CVS42_RS02860 72eab73a7c44e61b11b0f3fa8ee1d783 269 Gene3D G3DSA:1.25.40.10 151 197 7.9E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS02860 72eab73a7c44e61b11b0f3fa8ee1d783 269 Pfam PF16331 TolA binding protein trimerisation 54 128 4.9E-23 T 29-03-2018 IPR032519 YbgF, trimerisation domain GO:0070206 CVS42_RS12355 03ad40027b20ce1f94ffc21d13b1f712 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 114 260 4.8E-17 T 29-03-2018 IPR005064 Bordetella uptake gene GO:0030288 CVS42_RS12355 03ad40027b20ce1f94ffc21d13b1f712 328 Gene3D G3DSA:3.40.190.10 126 236 1.4E-10 T 29-03-2018 CVS42_RS12355 03ad40027b20ce1f94ffc21d13b1f712 328 SUPERFAMILY SSF53850 102 278 7.96E-6 T 29-03-2018 CVS42_RS12355 03ad40027b20ce1f94ffc21d13b1f712 328 PIRSF PIRSF017082 1 328 2.9E-77 T 29-03-2018 IPR005064 Bordetella uptake gene GO:0030288 CVS42_RS21335 f5f6988d0ce522a82b876e8ae2fa4d88 221 Pfam PF00156 Phosphoribosyl transferase domain 44 161 1.4E-12 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CVS42_RS21335 f5f6988d0ce522a82b876e8ae2fa4d88 221 Gene3D G3DSA:3.40.50.2020 1 193 2.9E-49 T 29-03-2018 CVS42_RS21335 f5f6988d0ce522a82b876e8ae2fa4d88 221 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 221 36.107 T 29-03-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS21335 f5f6988d0ce522a82b876e8ae2fa4d88 221 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 6.0E-67 T 29-03-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS21335 f5f6988d0ce522a82b876e8ae2fa4d88 221 SUPERFAMILY SSF53271 2 192 6.11E-47 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CVS42_RS05400 01ece434bc2b92f79d59541dd85017ee 508 Pfam PF00672 HAMP domain 177 228 1.2E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS05400 01ece434bc2b92f79d59541dd85017ee 508 SUPERFAMILY SSF58104 199 508 1.19E-72 T 29-03-2018 CVS42_RS05400 01ece434bc2b92f79d59541dd85017ee 508 Gene3D G3DSA:1.10.287.850 206 285 0.058 T 29-03-2018 CVS42_RS05400 01ece434bc2b92f79d59541dd85017ee 508 SMART SM00304 177 231 8.4E-14 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS05400 01ece434bc2b92f79d59541dd85017ee 508 SMART SM00304 234 284 63.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS05400 01ece434bc2b92f79d59541dd85017ee 508 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 309 473 1.7E-39 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS05400 01ece434bc2b92f79d59541dd85017ee 508 Gene3D G3DSA:1.10.287.950 286 508 3.9E-49 T 29-03-2018 CVS42_RS05400 01ece434bc2b92f79d59541dd85017ee 508 SMART SM00283 246 507 4.6E-65 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS09885 421831d78e6be87673f1d670a29b8119 658 SUPERFAMILY SSF52540 177 392 1.79E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09885 421831d78e6be87673f1d670a29b8119 658 Pfam PF13654 AAA domain 25 124 2.9E-6 T 29-03-2018 CVS42_RS09885 421831d78e6be87673f1d670a29b8119 658 Pfam PF13654 AAA domain 166 396 7.1E-49 T 29-03-2018 CVS42_RS09885 421831d78e6be87673f1d670a29b8119 658 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 508 612 8.7E-8 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CVS42_RS09885 421831d78e6be87673f1d670a29b8119 658 SUPERFAMILY SSF54211 420 615 7.21E-33 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS09885 421831d78e6be87673f1d670a29b8119 658 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 422 438 2.6E-7 T 29-03-2018 CVS42_RS09885 421831d78e6be87673f1d670a29b8119 658 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 505 524 2.6E-7 T 29-03-2018 CVS42_RS09885 421831d78e6be87673f1d670a29b8119 658 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 535 554 2.6E-7 T 29-03-2018 CVS42_RS09885 421831d78e6be87673f1d670a29b8119 658 Gene3D G3DSA:3.30.230.10 401 638 2.1E-28 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CVS42_RS06140 eded24a07a3139452ddfa30ec776257f 133 Pfam PF00816 H-NS histone family 39 126 2.4E-18 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CVS42_RS06140 eded24a07a3139452ddfa30ec776257f 133 PIRSF PIRSF002096 1 133 1.8E-51 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CVS42_RS06140 eded24a07a3139452ddfa30ec776257f 133 SUPERFAMILY SSF81273 2 58 2.94E-15 T 29-03-2018 CVS42_RS06140 eded24a07a3139452ddfa30ec776257f 133 SUPERFAMILY SSF81273 90 133 2.51E-9 T 29-03-2018 CVS42_RS06140 eded24a07a3139452ddfa30ec776257f 133 SMART SM00528 87 133 4.4E-20 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CVS42_RS06140 eded24a07a3139452ddfa30ec776257f 133 Gene3D G3DSA:4.10.430.10 93 133 2.7E-17 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CVS42_RS06140 eded24a07a3139452ddfa30ec776257f 133 Gene3D G3DSA:1.10.287.1050 1 57 1.7E-20 T 29-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 CVS42_RS20130 59be349d4b7769b4a8daecb4aeef4db4 222 SMART SM00862 145 219 1.3E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS20130 59be349d4b7769b4a8daecb4aeef4db4 222 SUPERFAMILY SSF52172 1 115 7.97E-39 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS20130 59be349d4b7769b4a8daecb4aeef4db4 222 Pfam PF00072 Response regulator receiver domain 3 112 1.4E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS20130 59be349d4b7769b4a8daecb4aeef4db4 222 Gene3D G3DSA:3.40.50.2300 1 121 5.0E-37 T 29-03-2018 CVS42_RS20130 59be349d4b7769b4a8daecb4aeef4db4 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 219 1.2E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS20130 59be349d4b7769b4a8daecb4aeef4db4 222 Gene3D G3DSA:1.10.10.10 124 222 7.2E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20130 59be349d4b7769b4a8daecb4aeef4db4 222 SMART SM00448 1 112 5.6E-42 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS20130 59be349d4b7769b4a8daecb4aeef4db4 222 SUPERFAMILY SSF46894 123 220 1.59E-22 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS14925 ddd6e81e6d593104605b807f00048eec 156 SUPERFAMILY SSF54534 23 155 4.91E-48 T 29-03-2018 CVS42_RS14925 ddd6e81e6d593104605b807f00048eec 156 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 65 153 1.3E-26 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CVS42_RS14925 ddd6e81e6d593104605b807f00048eec 156 Gene3D G3DSA:3.10.50.40 17 156 2.0E-48 T 29-03-2018 CVS42_RS14925 ddd6e81e6d593104605b807f00048eec 156 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 21 58 3.2E-8 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CVS42_RS12050 fa019a0216753637ac9169598ec2f44f 261 Gene3D G3DSA:3.40.50.1220 11 242 1.9E-39 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CVS42_RS12050 fa019a0216753637ac9169598ec2f44f 261 Pfam PF02146 Sir2 family 38 207 8.8E-38 T 29-03-2018 IPR003000 Sirtuin family GO:0070403 CVS42_RS12050 fa019a0216753637ac9169598ec2f44f 261 SUPERFAMILY SSF52467 30 234 1.59E-53 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 SUPERFAMILY SSF50156 381 449 6.44E-15 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 Gene3D G3DSA:2.30.42.10 367 453 6.2E-15 T 29-03-2018 CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 Gene3D G3DSA:2.40.10.10 140 257 2.5E-41 T 29-03-2018 CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 SUPERFAMILY SSF50156 233 350 2.4E-24 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 451 3.8E-159 T 29-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 Gene3D G3DSA:2.30.42.10 262 366 1.1E-28 T 29-03-2018 CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 1.4E-55 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 1.4E-55 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 1.4E-55 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 PRINTS PR00834 HtrA/DegQ protease family signature 124 144 1.4E-55 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 1.4E-55 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 PRINTS PR00834 HtrA/DegQ protease family signature 103 115 1.4E-55 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 SMART SM00228 267 349 4.9E-17 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 SMART SM00228 374 445 2.4E-8 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 Gene3D G3DSA:2.40.10.10 30 139 4.9E-31 T 29-03-2018 CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 SUPERFAMILY SSF50494 35 59 5.75E-63 T 29-03-2018 IPR009003 Peptidase S1, PA clan CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 SUPERFAMILY SSF50494 90 276 5.75E-63 T 29-03-2018 IPR009003 Peptidase S1, PA clan CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 Pfam PF13180 PDZ domain 383 445 5.0E-9 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 Pfam PF13180 PDZ domain 268 358 2.3E-17 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS19130 885aff786e9f2625a8b2d3126771e640 453 Pfam PF13365 Trypsin-like peptidase domain 93 228 1.1E-30 T 29-03-2018 CVS42_RS01110 75ab8cd541d25dc4c0c87d60dec9bf2c 137 SUPERFAMILY SSF54686 1 134 8.77E-55 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CVS42_RS01110 75ab8cd541d25dc4c0c87d60dec9bf2c 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 29-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01110 75ab8cd541d25dc4c0c87d60dec9bf2c 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.0E-48 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CVS42_RS01110 75ab8cd541d25dc4c0c87d60dec9bf2c 137 Gene3D G3DSA:3.90.1170.10 1 137 1.4E-49 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CVS42_RS01110 75ab8cd541d25dc4c0c87d60dec9bf2c 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.245 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01110 75ab8cd541d25dc4c0c87d60dec9bf2c 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 1.6E-58 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01110 75ab8cd541d25dc4c0c87d60dec9bf2c 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 29-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01110 75ab8cd541d25dc4c0c87d60dec9bf2c 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.1E-39 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01110 75ab8cd541d25dc4c0c87d60dec9bf2c 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.1E-39 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01110 75ab8cd541d25dc4c0c87d60dec9bf2c 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.1E-39 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01110 75ab8cd541d25dc4c0c87d60dec9bf2c 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.1E-39 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS13670 ada9ee41a9a6767f03896f67435cbcd3 298 PIRSF PIRSF000371 1 298 4.7E-91 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CVS42_RS13670 ada9ee41a9a6767f03896f67435cbcd3 298 Pfam PF04055 Radical SAM superfamily 20 227 9.1E-26 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS13670 ada9ee41a9a6767f03896f67435cbcd3 298 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 2 288 3.5E-98 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CVS42_RS13670 ada9ee41a9a6767f03896f67435cbcd3 298 SUPERFAMILY SSF102114 123 264 5.3E-15 T 29-03-2018 CVS42_RS13670 ada9ee41a9a6767f03896f67435cbcd3 298 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CVS42_RS13670 ada9ee41a9a6767f03896f67435cbcd3 298 Pfam PF13353 4Fe-4S single cluster domain 12 153 3.8E-12 T 29-03-2018 CVS42_RS13670 ada9ee41a9a6767f03896f67435cbcd3 298 Gene3D G3DSA:3.80.30.10 120 293 1.7E-29 T 29-03-2018 CVS42_RS21955 97d151e5fb81d89878f4d5bf65f2a446 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 4.0E-56 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CVS42_RS21955 97d151e5fb81d89878f4d5bf65f2a446 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 4.0E-56 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CVS42_RS21955 97d151e5fb81d89878f4d5bf65f2a446 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 4.0E-56 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CVS42_RS21955 97d151e5fb81d89878f4d5bf65f2a446 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 4.0E-56 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CVS42_RS21955 97d151e5fb81d89878f4d5bf65f2a446 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 4.0E-56 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CVS42_RS21955 97d151e5fb81d89878f4d5bf65f2a446 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 4.0E-56 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CVS42_RS21955 97d151e5fb81d89878f4d5bf65f2a446 338 Gene3D G3DSA:3.20.20.70 2 337 4.3E-154 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS21955 97d151e5fb81d89878f4d5bf65f2a446 338 SMART SM01004 9 333 8.0E-252 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CVS42_RS21955 97d151e5fb81d89878f4d5bf65f2a446 338 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 6.2E-142 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CVS42_RS21955 97d151e5fb81d89878f4d5bf65f2a446 338 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 29-03-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CVS42_RS21955 97d151e5fb81d89878f4d5bf65f2a446 338 SUPERFAMILY SSF51569 8 335 2.49E-146 T 29-03-2018 CVS42_RS21955 97d151e5fb81d89878f4d5bf65f2a446 338 PIRSF PIRSF001415 2 336 6.3E-152 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CVS42_RS00095 ff6db4a5409effac806d5dfcb55a85a0 146 Gene3D G3DSA:2.60.40.790 5 137 5.4E-18 T 29-03-2018 IPR008978 HSP20-like chaperone CVS42_RS00095 ff6db4a5409effac806d5dfcb55a85a0 146 SUPERFAMILY SSF49764 31 136 6.28E-18 T 29-03-2018 IPR008978 HSP20-like chaperone CVS42_RS00095 ff6db4a5409effac806d5dfcb55a85a0 146 Pfam PF00011 Hsp20/alpha crystallin family 41 136 1.1E-13 T 29-03-2018 IPR002068 Alpha crystallin/Hsp20 domain CVS42_RS07225 422bc77e4233552fd49684ef026824c0 958 SUPERFAMILY SSF53383 474 886 6.19E-98 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS07225 422bc77e4233552fd49684ef026824c0 958 SUPERFAMILY SSF53383 929 951 6.19E-98 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS07225 422bc77e4233552fd49684ef026824c0 958 Gene3D G3DSA:3.90.1150.10 341 440 4.0E-20 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS07225 422bc77e4233552fd49684ef026824c0 958 Gene3D G3DSA:3.40.640.10 530 771 3.2E-40 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS07225 422bc77e4233552fd49684ef026824c0 958 Gene3D G3DSA:3.90.1150.10 772 904 3.2E-44 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS07225 422bc77e4233552fd49684ef026824c0 958 SUPERFAMILY SSF53383 17 437 1.87E-96 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS07225 422bc77e4233552fd49684ef026824c0 958 Pfam PF02347 Glycine cleavage system P-protein 16 438 5.9E-177 T 29-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CVS42_RS07225 422bc77e4233552fd49684ef026824c0 958 Pfam PF02347 Glycine cleavage system P-protein 613 738 6.1E-7 T 29-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CVS42_RS07225 422bc77e4233552fd49684ef026824c0 958 Gene3D G3DSA:3.40.640.10 95 340 7.2E-30 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS07225 422bc77e4233552fd49684ef026824c0 958 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 950 0.0 T 29-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CVS42_RS07225 422bc77e4233552fd49684ef026824c0 958 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 956 25.343 T 29-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CVS42_RS07755 cc9a62c1bb89f58718ae1895d78f83b1 269 PIRSF PIRSF001430 1 252 2.5E-78 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS07755 cc9a62c1bb89f58718ae1895d78f83b1 269 Pfam PF01416 tRNA pseudouridine synthase 8 102 1.4E-9 T 29-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS07755 cc9a62c1bb89f58718ae1895d78f83b1 269 Pfam PF01416 tRNA pseudouridine synthase 144 244 3.5E-29 T 29-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS07755 cc9a62c1bb89f58718ae1895d78f83b1 269 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 35.289 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS07755 cc9a62c1bb89f58718ae1895d78f83b1 269 Gene3D G3DSA:3.30.70.660 105 242 5.2E-35 T 29-03-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS07755 cc9a62c1bb89f58718ae1895d78f83b1 269 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 1.1E-75 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS07755 cc9a62c1bb89f58718ae1895d78f83b1 269 SUPERFAMILY SSF55120 1 256 1.4E-92 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS07755 cc9a62c1bb89f58718ae1895d78f83b1 269 Gene3D G3DSA:3.30.70.580 1 104 2.8E-36 T 29-03-2018 CVS42_RS12325 f7a990247c4a1c9e89308ebecb1b0339 165 PIRSF PIRSF001467 1 163 1.8E-27 T 29-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CVS42_RS12325 f7a990247c4a1c9e89308ebecb1b0339 165 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 29-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CVS42_RS12325 f7a990247c4a1c9e89308ebecb1b0339 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 4.1E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CVS42_RS12325 f7a990247c4a1c9e89308ebecb1b0339 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 4.1E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CVS42_RS12325 f7a990247c4a1c9e89308ebecb1b0339 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 4.1E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CVS42_RS12325 f7a990247c4a1c9e89308ebecb1b0339 165 SUPERFAMILY SSF50891 1 163 1.46E-56 T 29-03-2018 IPR029000 Cyclophilin-like domain CVS42_RS12325 f7a990247c4a1c9e89308ebecb1b0339 165 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 161 1.5E-47 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CVS42_RS12325 f7a990247c4a1c9e89308ebecb1b0339 165 Gene3D G3DSA:2.40.100.10 1 165 4.6E-49 T 29-03-2018 IPR029000 Cyclophilin-like domain CVS42_RS05945 41176176d6b1d796f1729ecc39bb4236 349 Gene3D G3DSA:2.40.50.100 179 256 0.011 T 29-03-2018 CVS42_RS05945 41176176d6b1d796f1729ecc39bb4236 349 Gene3D G3DSA:2.40.50.100 72 178 1.4E-13 T 29-03-2018 CVS42_RS05945 41176176d6b1d796f1729ecc39bb4236 349 Gene3D G3DSA:2.40.50.100 15 71 0.0025 T 29-03-2018 CVS42_RS05945 41176176d6b1d796f1729ecc39bb4236 349 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 250 2.9E-9 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CVS42_RS05945 41176176d6b1d796f1729ecc39bb4236 349 SUPERFAMILY SSF111369 46 194 9.15E-20 T 29-03-2018 CVS42_RS05945 41176176d6b1d796f1729ecc39bb4236 349 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 30 345 1.3E-54 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CVS42_RS07255 a9865dc427693c4d548d49acb4dd6f2f 270 Pfam PF03618 Kinase/pyrophosphorylase 4 260 2.7E-74 T 29-03-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 CVS42_RS07255 a9865dc427693c4d548d49acb4dd6f2f 270 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 1 269 75.154 T 29-03-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein CVS42_RS07255 a9865dc427693c4d548d49acb4dd6f2f 270 Gene3D G3DSA:3.40.50.300 182 269 0.033 T 29-03-2018 CVS42_RS02505 dd36e001f25092ae23c455300a7a9a39 95 Pfam PF05488 PAAR motif 20 87 2.1E-15 T 29-03-2018 IPR008727 PAAR motif CVS42_RS16660 24e8023cd773292806a88eba684851d3 648 Gene3D G3DSA:3.40.50.300 132 334 8.4E-63 T 29-03-2018 CVS42_RS16660 24e8023cd773292806a88eba684851d3 648 Gene3D G3DSA:1.10.8.60 335 417 7.1E-26 T 29-03-2018 CVS42_RS16660 24e8023cd773292806a88eba684851d3 648 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 191 323 2.4E-46 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CVS42_RS16660 24e8023cd773292806a88eba684851d3 648 Pfam PF06480 FtsH Extracellular 8 92 3.5E-11 T 29-03-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 CVS42_RS16660 24e8023cd773292806a88eba684851d3 648 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 631 37.596 T 29-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CVS42_RS16660 24e8023cd773292806a88eba684851d3 648 SUPERFAMILY SSF52540 147 394 1.18E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS16660 24e8023cd773292806a88eba684851d3 648 Pfam PF01434 Peptidase family M41 385 594 1.6E-82 T 29-03-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CVS42_RS16660 24e8023cd773292806a88eba684851d3 648 SUPERFAMILY SSF140990 405 606 4.71E-75 T 29-03-2018 CVS42_RS16660 24e8023cd773292806a88eba684851d3 648 SMART SM00382 187 326 8.6E-27 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS16660 24e8023cd773292806a88eba684851d3 648 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 103 596 6.8E-245 T 29-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CVS42_RS16660 24e8023cd773292806a88eba684851d3 648 ProSitePatterns PS00674 AAA-protein family signature. 294 312 - T 29-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CVS42_RS13520 b65f31754008e73c0d688deee99b83e0 344 SUPERFAMILY SSF47384 116 188 6.47E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS13520 b65f31754008e73c0d688deee99b83e0 344 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 186 6.8E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS13520 b65f31754008e73c0d688deee99b83e0 344 Gene3D G3DSA:1.10.287.130 114 184 2.3E-8 T 29-03-2018 CVS42_RS13520 b65f31754008e73c0d688deee99b83e0 344 SMART SM00387 231 335 3.4E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS13520 b65f31754008e73c0d688deee99b83e0 344 SUPERFAMILY SSF55785 20 100 6.09E-9 T 29-03-2018 IPR000014 PAS domain CVS42_RS13520 b65f31754008e73c0d688deee99b83e0 344 SMART SM00388 122 188 5.3E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS13520 b65f31754008e73c0d688deee99b83e0 344 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 334 7.7E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS13520 b65f31754008e73c0d688deee99b83e0 344 SMART SM00091 16 79 7.2E-4 T 29-03-2018 IPR000014 PAS domain CVS42_RS13520 b65f31754008e73c0d688deee99b83e0 344 Gene3D G3DSA:3.30.565.10 189 337 4.8E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS13520 b65f31754008e73c0d688deee99b83e0 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 332 7.7E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS13520 b65f31754008e73c0d688deee99b83e0 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 295 313 7.7E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS13520 b65f31754008e73c0d688deee99b83e0 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 294 7.7E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS13520 b65f31754008e73c0d688deee99b83e0 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 266 280 7.7E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS13520 b65f31754008e73c0d688deee99b83e0 344 SUPERFAMILY SSF55874 177 335 2.1E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS13520 b65f31754008e73c0d688deee99b83e0 344 Gene3D G3DSA:3.30.450.20 2 113 6.3E-10 T 29-03-2018 CVS42_RS13520 b65f31754008e73c0d688deee99b83e0 344 Pfam PF13188 PAS domain 17 72 1.8E-7 T 29-03-2018 IPR000014 PAS domain CVS42_RS06205 b2f14e636423e6d7d5b54a0a5882ec29 230 SMART SM00448 32 144 5.7E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06205 b2f14e636423e6d7d5b54a0a5882ec29 230 Gene3D G3DSA:1.10.10.10 171 230 7.4E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS06205 b2f14e636423e6d7d5b54a0a5882ec29 230 Gene3D G3DSA:3.40.50.2300 31 170 5.3E-29 T 29-03-2018 CVS42_RS06205 b2f14e636423e6d7d5b54a0a5882ec29 230 Pfam PF00072 Response regulator receiver domain 35 144 3.7E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06205 b2f14e636423e6d7d5b54a0a5882ec29 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 201 3.0E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS06205 b2f14e636423e6d7d5b54a0a5882ec29 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 185 3.0E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS06205 b2f14e636423e6d7d5b54a0a5882ec29 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 213 3.0E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS06205 b2f14e636423e6d7d5b54a0a5882ec29 230 SMART SM00421 168 225 1.4E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS06205 b2f14e636423e6d7d5b54a0a5882ec29 230 Pfam PF00196 Bacterial regulatory proteins, luxR family 170 225 9.0E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS06205 b2f14e636423e6d7d5b54a0a5882ec29 230 SUPERFAMILY SSF52172 31 196 1.32E-30 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS06205 b2f14e636423e6d7d5b54a0a5882ec29 230 ProSitePatterns PS00622 LuxR-type HTH domain signature. 185 212 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS21265 266cb2b1c94cd2b6c048515e16760d76 504 SUPERFAMILY SSF54211 8 169 1.48E-33 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS21265 266cb2b1c94cd2b6c048515e16760d76 504 Gene3D G3DSA:3.30.230.10 2 183 1.2E-41 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CVS42_RS21265 266cb2b1c94cd2b6c048515e16760d76 504 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 400 492 1.2E-30 T 29-03-2018 IPR025158 Mg chelatase-related protein, C-terminal domain CVS42_RS21265 266cb2b1c94cd2b6c048515e16760d76 504 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 288 302 1.0E-5 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CVS42_RS21265 266cb2b1c94cd2b6c048515e16760d76 504 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 316 329 1.0E-5 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CVS42_RS21265 266cb2b1c94cd2b6c048515e16760d76 504 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 208 223 1.0E-5 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CVS42_RS21265 266cb2b1c94cd2b6c048515e16760d76 504 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 390 1.1E-93 T 29-03-2018 IPR000523 Magnesium chelatase ChlI domain CVS42_RS21265 266cb2b1c94cd2b6c048515e16760d76 504 Gene3D G3DSA:3.40.50.300 190 438 1.1E-24 T 29-03-2018 CVS42_RS21265 266cb2b1c94cd2b6c048515e16760d76 504 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 9.9E-47 T 29-03-2018 CVS42_RS21265 266cb2b1c94cd2b6c048515e16760d76 504 SUPERFAMILY SSF52540 189 498 3.39E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS21265 266cb2b1c94cd2b6c048515e16760d76 504 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 492 3.2E-206 T 29-03-2018 IPR004482 Mg chelatase-related protein CVS42_RS21265 266cb2b1c94cd2b6c048515e16760d76 504 SMART SM00382 209 371 1.0E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS19290 4d046c1855d40ea00759ce2d64b00c62 508 Pfam PF00027 Cyclic nucleotide-binding domain 375 458 1.1E-18 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CVS42_RS19290 4d046c1855d40ea00759ce2d64b00c62 508 Pfam PF00924 Mechanosensitive ion channel 129 315 3.5E-27 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CVS42_RS19290 4d046c1855d40ea00759ce2d64b00c62 508 SUPERFAMILY SSF50182 156 218 9.48E-14 T 29-03-2018 IPR010920 LSM domain CVS42_RS19290 4d046c1855d40ea00759ce2d64b00c62 508 SUPERFAMILY SSF51206 347 477 1.44E-29 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CVS42_RS19290 4d046c1855d40ea00759ce2d64b00c62 508 PRINTS PR00103 cAMP-dependent protein kinase signature 419 428 4.4E-5 T 29-03-2018 CVS42_RS19290 4d046c1855d40ea00759ce2d64b00c62 508 PRINTS PR00103 cAMP-dependent protein kinase signature 431 442 4.4E-5 T 29-03-2018 CVS42_RS19290 4d046c1855d40ea00759ce2d64b00c62 508 PRINTS PR00103 cAMP-dependent protein kinase signature 375 389 4.4E-5 T 29-03-2018 CVS42_RS19290 4d046c1855d40ea00759ce2d64b00c62 508 PRINTS PR00103 cAMP-dependent protein kinase signature 390 404 4.4E-5 T 29-03-2018 CVS42_RS19290 4d046c1855d40ea00759ce2d64b00c62 508 SMART SM00100 354 474 3.4E-16 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CVS42_RS19290 4d046c1855d40ea00759ce2d64b00c62 508 Gene3D G3DSA:2.30.30.60 174 221 1.3E-12 T 29-03-2018 CVS42_RS19290 4d046c1855d40ea00759ce2d64b00c62 508 Gene3D G3DSA:2.60.120.10 341 485 1.2E-30 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS10000 b2a424a19e511da91ee160ea2c3c284e 262 SUPERFAMILY SSF48452 92 223 2.72E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS10000 b2a424a19e511da91ee160ea2c3c284e 262 Gene3D G3DSA:1.25.40.10 110 181 1.7E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS10000 b2a424a19e511da91ee160ea2c3c284e 262 Gene3D G3DSA:1.25.40.10 182 256 0.0012 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS10000 b2a424a19e511da91ee160ea2c3c284e 262 Gene3D G3DSA:1.25.40.10 43 109 0.4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 Gene3D G3DSA:3.30.70.1430 568 669 1.7E-20 T 29-03-2018 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 SUPERFAMILY SSF82714 723 810 6.93E-23 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 SUPERFAMILY SSF82693 673 722 4.71E-29 T 29-03-2018 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 SUPERFAMILY SSF82693 809 857 4.71E-29 T 29-03-2018 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 Gene3D G3DSA:1.20.1640.10 822 1030 3.3E-40 T 29-03-2018 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 Gene3D G3DSA:3.30.70.1430 38 140 7.0E-30 T 29-03-2018 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 Gene3D G3DSA:1.20.1640.10 286 509 3.1E-45 T 29-03-2018 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 Gene3D G3DSA:3.30.70.1440 673 769 4.7E-20 T 29-03-2018 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 7.4E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 7.4E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 7.4E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 7.4E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 7.4E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 7.4E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 7.4E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 7.4E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 7.4E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 SUPERFAMILY SSF82693 38 133 4.01E-28 T 29-03-2018 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1040 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 Pfam PF00873 AcrB/AcrD/AcrF family 1 1026 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 SUPERFAMILY SSF82714 182 270 5.62E-21 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 SUPERFAMILY SSF82866 296 497 4.32E-50 T 29-03-2018 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 Gene3D G3DSA:3.30.2090.10 180 275 2.3E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 SUPERFAMILY SSF82693 135 182 2.46E-25 T 29-03-2018 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 SUPERFAMILY SSF82693 274 330 2.46E-25 T 29-03-2018 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 SUPERFAMILY SSF82866 833 1027 9.68E-46 T 29-03-2018 CVS42_RS14560 a9f5df74d5699dd7e23b94a5f11b86df 1049 SUPERFAMILY SSF82693 566 671 5.23E-33 T 29-03-2018 CVS42_RS07700 85f1137f459fe5d456e59e51c095d973 498 Gene3D G3DSA:1.20.120.430 67 258 1.2E-38 T 29-03-2018 CVS42_RS07700 85f1137f459fe5d456e59e51c095d973 498 Hamap MF_00195 GTPase Der [der]. 2 471 38.754 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CVS42_RS07700 85f1137f459fe5d456e59e51c095d973 498 Gene3D G3DSA:1.20.120.430 1 66 1.3E-14 T 29-03-2018 CVS42_RS07700 85f1137f459fe5d456e59e51c095d973 498 Pfam PF01926 50S ribosome-binding GTPase 215 332 4.1E-25 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS07700 85f1137f459fe5d456e59e51c095d973 498 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.0E-28 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS07700 85f1137f459fe5d456e59e51c095d973 498 PIRSF PIRSF006485 1 476 1.7E-179 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CVS42_RS07700 85f1137f459fe5d456e59e51c095d973 498 SUPERFAMILY SSF52540 4 164 4.03E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS07700 85f1137f459fe5d456e59e51c095d973 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.4E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS07700 85f1137f459fe5d456e59e51c095d973 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.4E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS07700 85f1137f459fe5d456e59e51c095d973 498 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 388 467 3.8E-26 T 29-03-2018 IPR032859 GTPase Der, C-terminal KH-domain-like CVS42_RS07700 85f1137f459fe5d456e59e51c095d973 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 213 376 2.4E-24 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CVS42_RS07700 85f1137f459fe5d456e59e51c095d973 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 157 1.1E-20 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CVS42_RS07700 85f1137f459fe5d456e59e51c095d973 498 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 468 2.8E-179 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CVS42_RS07700 85f1137f459fe5d456e59e51c095d973 498 Gene3D G3DSA:3.30.300.20 387 469 2.6E-28 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CVS42_RS07700 85f1137f459fe5d456e59e51c095d973 498 Gene3D G3DSA:3.40.50.300 259 386 8.3E-24 T 29-03-2018 CVS42_RS07700 85f1137f459fe5d456e59e51c095d973 498 SUPERFAMILY SSF52540 137 168 4.42E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS07700 85f1137f459fe5d456e59e51c095d973 498 SUPERFAMILY SSF52540 210 474 4.42E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS21310 04c8a5a49c8c33dec001877cda44037c 483 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 361 481 1.8E-30 T 29-03-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain CVS42_RS21310 04c8a5a49c8c33dec001877cda44037c 483 Pfam PF12801 4Fe-4S binding domain 101 142 1.3E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS21310 04c8a5a49c8c33dec001877cda44037c 483 Gene3D G3DSA:3.30.70.20 229 282 8.9E-11 T 29-03-2018 CVS42_RS21310 04c8a5a49c8c33dec001877cda44037c 483 SUPERFAMILY SSF54862 112 134 2.39E-32 T 29-03-2018 CVS42_RS21310 04c8a5a49c8c33dec001877cda44037c 483 SUPERFAMILY SSF54862 180 362 2.39E-32 T 29-03-2018 CVS42_RS21310 04c8a5a49c8c33dec001877cda44037c 483 Gene3D G3DSA:3.30.70.20 302 374 0.0014 T 29-03-2018 CVS42_RS21310 04c8a5a49c8c33dec001877cda44037c 483 Gene3D G3DSA:2.60.40.10 375 483 7.0E-27 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS21310 04c8a5a49c8c33dec001877cda44037c 483 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 279 290 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS21310 04c8a5a49c8c33dec001877cda44037c 483 Pfam PF13746 4Fe-4S dicluster domain 227 331 1.0E-41 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS21310 04c8a5a49c8c33dec001877cda44037c 483 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 48 462 2.2E-172 T 29-03-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 CVS42_RS21310 04c8a5a49c8c33dec001877cda44037c 483 Gene3D G3DSA:3.30.70.20 283 301 0.17 T 29-03-2018 CVS42_RS15775 ec0a9dd3a22ff47918806da2aa6e7fc3 286 SUPERFAMILY SSF53613 1 277 1.12E-70 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS15775 ec0a9dd3a22ff47918806da2aa6e7fc3 286 Gene3D G3DSA:3.40.1190.20 1 286 2.2E-62 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS15775 ec0a9dd3a22ff47918806da2aa6e7fc3 286 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 286 51.818 T 29-03-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 CVS42_RS15775 ec0a9dd3a22ff47918806da2aa6e7fc3 286 Pfam PF08543 Phosphomethylpyrimidine kinase 75 259 3.4E-16 T 29-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CVS42_RS15775 ec0a9dd3a22ff47918806da2aa6e7fc3 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 285 1.2E-111 T 29-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CVS42_RS15300 48a45a6806fcfe1c0bda81cb4db6f47a 869 Gene3D G3DSA:3.40.50.150 183 474 7.5E-63 T 29-03-2018 CVS42_RS15300 48a45a6806fcfe1c0bda81cb4db6f47a 869 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CVS42_RS15300 48a45a6806fcfe1c0bda81cb4db6f47a 869 Pfam PF12161 HsdM N-terminal domain 6 150 1.2E-15 T 29-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CVS42_RS15300 48a45a6806fcfe1c0bda81cb4db6f47a 869 Pfam PF02384 N-6 DNA Methylase 162 477 5.1E-99 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CVS42_RS15300 48a45a6806fcfe1c0bda81cb4db6f47a 869 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 185 201 4.2E-19 T 29-03-2018 CVS42_RS15300 48a45a6806fcfe1c0bda81cb4db6f47a 869 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 213 227 4.2E-19 T 29-03-2018 CVS42_RS15300 48a45a6806fcfe1c0bda81cb4db6f47a 869 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 299 311 4.2E-19 T 29-03-2018 CVS42_RS15300 48a45a6806fcfe1c0bda81cb4db6f47a 869 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 333 357 4.2E-19 T 29-03-2018 CVS42_RS15300 48a45a6806fcfe1c0bda81cb4db6f47a 869 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 4 486 1.0E-102 T 29-03-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 CVS42_RS15300 48a45a6806fcfe1c0bda81cb4db6f47a 869 SUPERFAMILY SSF53335 4 43 2.04E-122 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS15300 48a45a6806fcfe1c0bda81cb4db6f47a 869 SUPERFAMILY SSF53335 74 515 2.04E-122 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS05060 5ae803cd5c3cb4d4a04862345aa9bae1 473 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 24 308 4.5E-65 T 29-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family CVS42_RS05060 5ae803cd5c3cb4d4a04862345aa9bae1 473 SUPERFAMILY SSF53850 25 309 1.55E-60 T 29-03-2018 CVS42_RS05060 5ae803cd5c3cb4d4a04862345aa9bae1 473 Gene3D G3DSA:3.40.190.10 22 159 1.1E-18 T 29-03-2018 CVS42_RS05060 5ae803cd5c3cb4d4a04862345aa9bae1 473 Gene3D G3DSA:3.40.190.10 160 311 3.7E-21 T 29-03-2018 CVS42_RS05060 5ae803cd5c3cb4d4a04862345aa9bae1 473 Pfam PF16868 NMT1-like family 29 308 2.1E-66 T 29-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family CVS42_RS13280 e50db26373510f9bebf864dc6ec157a6 132 Pfam PF07233 Protein of unknown function (DUF1425) 39 125 1.4E-24 T 29-03-2018 IPR010824 Protein of unknown function DUF1425 CVS42_RS08240 bf96f758fea36f5dadd335dc4f71db37 278 Pfam PF13503 Domain of unknown function (DUF4123) 14 130 1.2E-14 T 29-03-2018 IPR025391 Domain of unknown function DUF4123 CVS42_RS12300 7e1350cc8ddd90a76d388b92ae68c42a 248 Gene3D G3DSA:3.40.190.10 18 168 3.2E-13 T 29-03-2018 CVS42_RS12300 7e1350cc8ddd90a76d388b92ae68c42a 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 245 1.2E-21 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS12300 7e1350cc8ddd90a76d388b92ae68c42a 248 Gene3D G3DSA:3.40.190.10 169 247 0.0092 T 29-03-2018 CVS42_RS12300 7e1350cc8ddd90a76d388b92ae68c42a 248 SUPERFAMILY SSF53850 32 246 9.48E-33 T 29-03-2018 CVS42_RS14890 5d71f420787c0d973b9ee394a248b772 200 Pfam PF13560 Helix-turn-helix domain 24 79 1.0E-9 T 29-03-2018 CVS42_RS14890 5d71f420787c0d973b9ee394a248b772 200 SMART SM00530 27 82 8.3E-9 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS14890 5d71f420787c0d973b9ee394a248b772 200 Gene3D G3DSA:2.60.120.10 89 200 2.1E-21 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS14890 5d71f420787c0d973b9ee394a248b772 200 SUPERFAMILY SSF47413 23 88 9.65E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS14890 5d71f420787c0d973b9ee394a248b772 200 Pfam PF07883 Cupin domain 126 193 9.2E-19 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CVS42_RS14890 5d71f420787c0d973b9ee394a248b772 200 Gene3D G3DSA:1.10.260.40 20 88 1.5E-15 T 29-03-2018 CVS42_RS14890 5d71f420787c0d973b9ee394a248b772 200 SUPERFAMILY SSF51182 67 199 6.93E-31 T 29-03-2018 IPR011051 RmlC-like cupin domain CVS42_RS17975 3443b7c5be9b60ae20293cee106ef89a 126 Pfam PF07238 PilZ domain 3 100 8.7E-11 T 29-03-2018 IPR009875 PilZ domain GO:0035438 CVS42_RS17975 3443b7c5be9b60ae20293cee106ef89a 126 PIRSF PIRSF028141 1 120 9.7E-50 T 29-03-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type CVS42_RS17975 3443b7c5be9b60ae20293cee106ef89a 126 Gene3D G3DSA:2.40.10.220 1 124 2.9E-17 T 29-03-2018 CVS42_RS17975 3443b7c5be9b60ae20293cee106ef89a 126 SUPERFAMILY SSF141371 1 118 1.96E-33 T 29-03-2018 CVS42_RS06080 25a5ea1423cf65706f5be1bc894ff699 316 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 7 311 1.9E-115 T 29-03-2018 IPR017686 Phage/plasmid-like protein CVS42_RS06080 25a5ea1423cf65706f5be1bc894ff699 316 Pfam PF06067 Domain of unknown function (DUF932) 75 296 2.4E-76 T 29-03-2018 IPR026325 Protein of unknown function DUF932 CVS42_RS13765 ac554c562909352c68862541101364b1 354 PIRSF PIRSF001361 4 349 3.0E-138 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CVS42_RS13765 ac554c562909352c68862541101364b1 354 Gene3D G3DSA:3.20.20.70 6 351 7.4E-110 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS13765 ac554c562909352c68862541101364b1 354 SUPERFAMILY SSF51569 10 345 1.04E-117 T 29-03-2018 CVS42_RS13765 ac554c562909352c68862541101364b1 354 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 11 346 3.2E-138 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CVS42_RS13765 ac554c562909352c68862541101364b1 354 Pfam PF00793 DAHP synthetase I family 40 334 2.2E-86 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CVS42_RS21760 3f3bffd6b790df687540752ed28be2b4 218 Pfam PF13488 Glycine zipper 36 83 1.7E-9 T 29-03-2018 CVS42_RS21760 3f3bffd6b790df687540752ed28be2b4 218 SUPERFAMILY SSF103088 102 216 3.53E-35 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS21760 3f3bffd6b790df687540752ed28be2b4 218 PRINTS PR01021 OMPA domain signature 114 136 2.4E-10 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS21760 3f3bffd6b790df687540752ed28be2b4 218 PRINTS PR01021 OMPA domain signature 144 159 2.4E-10 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS21760 3f3bffd6b790df687540752ed28be2b4 218 PRINTS PR01021 OMPA domain signature 159 175 2.4E-10 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS21760 3f3bffd6b790df687540752ed28be2b4 218 Pfam PF00691 OmpA family 113 208 2.5E-20 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS21760 3f3bffd6b790df687540752ed28be2b4 218 Gene3D G3DSA:3.30.1330.60 81 218 7.8E-39 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS16255 b6b2a537b0b9bc277d46a58e46df0eb6 377 Gene3D G3DSA:3.40.50.150 192 377 4.8E-32 T 29-03-2018 CVS42_RS16255 b6b2a537b0b9bc277d46a58e46df0eb6 377 PIRSF PIRSF037565 1 377 3.9E-159 T 29-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS16255 b6b2a537b0b9bc277d46a58e46df0eb6 377 SUPERFAMILY SSF53335 196 371 1.42E-27 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS16255 b6b2a537b0b9bc277d46a58e46df0eb6 377 Gene3D G3DSA:3.40.50.150 20 183 0.2 T 29-03-2018 CVS42_RS16255 b6b2a537b0b9bc277d46a58e46df0eb6 377 Pfam PF05175 Methyltransferase small domain 203 373 3.7E-54 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CVS42_RS16255 b6b2a537b0b9bc277d46a58e46df0eb6 377 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CVS42_RS16255 b6b2a537b0b9bc277d46a58e46df0eb6 377 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 51.002 T 29-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 SUPERFAMILY SSF82866 296 498 2.75E-48 T 29-03-2018 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 Gene3D G3DSA:3.30.70.1430 567 667 1.9E-17 T 29-03-2018 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 Gene3D G3DSA:1.20.1640.10 823 1022 7.8E-37 T 29-03-2018 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1023 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 Gene3D G3DSA:3.30.2090.10 719 804 7.4E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 Gene3D G3DSA:1.20.1640.10 286 510 6.9E-45 T 29-03-2018 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 3.0E-99 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 3.0E-99 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 3.0E-99 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 3.0E-99 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 3.0E-99 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.0E-99 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.0E-99 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 3.0E-99 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 3.0E-99 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 SUPERFAMILY SSF82714 183 272 1.7E-21 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 Gene3D G3DSA:3.30.70.1430 38 140 8.6E-23 T 29-03-2018 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 SUPERFAMILY SSF82693 565 665 1.78E-24 T 29-03-2018 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 SUPERFAMILY SSF82693 274 329 2.49E-23 T 29-03-2018 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 SUPERFAMILY SSF82693 135 182 2.49E-23 T 29-03-2018 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 SUPERFAMILY SSF82714 720 802 8.11E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 SUPERFAMILY SSF82866 802 1022 3.66E-44 T 29-03-2018 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 SUPERFAMILY SSF82693 39 132 6.8E-22 T 29-03-2018 CVS42_RS06700 a3b5bcbefa9424f052aa3882af6a3033 1044 Gene3D G3DSA:3.30.2090.10 180 275 3.7E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS06850 1ad9040aa4993cc20751850b9152eae2 548 Gene3D G3DSA:1.25.40.10 175 272 1.7E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS06850 1ad9040aa4993cc20751850b9152eae2 548 SUPERFAMILY SSF48452 178 302 4.75E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS06850 1ad9040aa4993cc20751850b9152eae2 548 Pfam PF00072 Response regulator receiver domain 19 129 3.9E-13 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06850 1ad9040aa4993cc20751850b9152eae2 548 SMART SM00028 241 274 34.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS06850 1ad9040aa4993cc20751850b9152eae2 548 SMART SM00028 456 489 0.022 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS06850 1ad9040aa4993cc20751850b9152eae2 548 SMART SM00028 207 240 76.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS06850 1ad9040aa4993cc20751850b9152eae2 548 SMART SM00028 275 308 76.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS06850 1ad9040aa4993cc20751850b9152eae2 548 SMART SM00448 17 133 1.9E-16 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06850 1ad9040aa4993cc20751850b9152eae2 548 Gene3D G3DSA:1.25.40.10 273 453 5.0E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS06850 1ad9040aa4993cc20751850b9152eae2 548 Pfam PF13432 Tetratricopeptide repeat 179 231 0.0027 T 29-03-2018 CVS42_RS06850 1ad9040aa4993cc20751850b9152eae2 548 Pfam PF13432 Tetratricopeptide repeat 461 503 0.012 T 29-03-2018 CVS42_RS06850 1ad9040aa4993cc20751850b9152eae2 548 Pfam PF14559 Tetratricopeptide repeat 251 307 4.1E-7 T 29-03-2018 CVS42_RS06850 1ad9040aa4993cc20751850b9152eae2 548 Gene3D G3DSA:3.40.50.2300 4 146 2.8E-22 T 29-03-2018 CVS42_RS06850 1ad9040aa4993cc20751850b9152eae2 548 Gene3D G3DSA:1.25.40.10 454 546 1.9E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS06850 1ad9040aa4993cc20751850b9152eae2 548 SUPERFAMILY SSF52172 16 148 8.82E-21 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS15360 f221772ff397931cca7bc9f5a1f848cf 512 Gene3D G3DSA:3.30.1330.60 82 253 1.2E-30 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS15360 f221772ff397931cca7bc9f5a1f848cf 512 Pfam PF00691 OmpA family 132 233 3.1E-16 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS15360 f221772ff397931cca7bc9f5a1f848cf 512 SUPERFAMILY SSF103088 120 238 1.57E-27 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS06395 af6e749fc596ff408043b619b072c988 291 Pfam PF12801 4Fe-4S binding domain 81 125 1.6E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS06395 af6e749fc596ff408043b619b072c988 291 Pfam PF12801 4Fe-4S binding domain 173 210 1.6E-6 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS06395 af6e749fc596ff408043b619b072c988 291 Gene3D G3DSA:3.30.70.20 192 233 4.7E-7 T 29-03-2018 CVS42_RS06395 af6e749fc596ff408043b619b072c988 291 Gene3D G3DSA:3.30.70.20 234 260 4.4E-6 T 29-03-2018 CVS42_RS06395 af6e749fc596ff408043b619b072c988 291 Gene3D G3DSA:3.30.70.20 261 290 9.9E-4 T 29-03-2018 CVS42_RS06395 af6e749fc596ff408043b619b072c988 291 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 223 234 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS06395 af6e749fc596ff408043b619b072c988 291 SUPERFAMILY SSF54862 93 113 6.28E-19 T 29-03-2018 CVS42_RS06395 af6e749fc596ff408043b619b072c988 291 SUPERFAMILY SSF54862 152 276 6.28E-19 T 29-03-2018 CVS42_RS06395 af6e749fc596ff408043b619b072c988 291 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 21 277 1.0E-104 T 29-03-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 CVS42_RS13775 367006db8a1118a697f3bee4c1171ab1 633 Gene3D G3DSA:1.25.20.10 19 377 2.8E-42 T 29-03-2018 CVS42_RS13775 367006db8a1118a697f3bee4c1171ab1 633 SUPERFAMILY SSF53955 469 628 1.31E-48 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS13775 367006db8a1118a697f3bee4c1171ab1 633 Gene3D G3DSA:1.10.530.10 463 633 5.1E-40 T 29-03-2018 CVS42_RS13775 367006db8a1118a697f3bee4c1171ab1 633 SUPERFAMILY SSF48435 21 467 7.45E-123 T 29-03-2018 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 CVS42_RS13775 367006db8a1118a697f3bee4c1171ab1 633 Pfam PF14718 Soluble lytic murein transglycosylase L domain 397 462 4.0E-18 T 29-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 CVS42_RS13775 367006db8a1118a697f3bee4c1171ab1 633 Gene3D G3DSA:1.10.1240.20 396 462 9.1E-13 T 29-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 CVS42_RS13775 367006db8a1118a697f3bee4c1171ab1 633 Pfam PF01464 Transglycosylase SLT domain 474 586 7.2E-31 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CVS42_RS13775 367006db8a1118a697f3bee4c1171ab1 633 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 491 519 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CVS42_RS09215 aac8896fbcfc600054e58166e673a752 103 Gene3D G3DSA:3.30.70.100 3 103 4.4E-20 T 29-03-2018 CVS42_RS09215 aac8896fbcfc600054e58166e673a752 103 Pfam PF03992 Antibiotic biosynthesis monooxygenase 10 82 4.8E-13 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CVS42_RS09215 aac8896fbcfc600054e58166e673a752 103 SUPERFAMILY SSF54909 9 101 2.44E-26 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CVS42_RS10970 25a8b854a7d9e58adcdf2f9e71026565 208 Pfam PF06114 IrrE N-terminal-like domain 85 197 5.3E-11 T 29-03-2018 IPR010359 IrrE N-terminal-like domain CVS42_RS17225 5e7df37ca016031debd7149b28ae5b9b 400 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 6.0E-146 T 29-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CVS42_RS17225 5e7df37ca016031debd7149b28ae5b9b 400 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.079 T 29-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CVS42_RS17225 5e7df37ca016031debd7149b28ae5b9b 400 Gene3D G3DSA:3.40.50.300 142 345 3.9E-32 T 29-03-2018 CVS42_RS17225 5e7df37ca016031debd7149b28ae5b9b 400 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.4E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS17225 5e7df37ca016031debd7149b28ae5b9b 400 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.4E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS17225 5e7df37ca016031debd7149b28ae5b9b 400 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.4E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS17225 5e7df37ca016031debd7149b28ae5b9b 400 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.4E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS17225 5e7df37ca016031debd7149b28ae5b9b 400 SUPERFAMILY SSF82051 2 157 5.49E-57 T 29-03-2018 IPR006169 GTP1/OBG domain CVS42_RS17225 5e7df37ca016031debd7149b28ae5b9b 400 Gene3D G3DSA:2.70.210.12 2 141 3.3E-58 T 29-03-2018 IPR006169 GTP1/OBG domain CVS42_RS17225 5e7df37ca016031debd7149b28ae5b9b 400 Pfam PF01018 GTP1/OBG 4 156 7.0E-59 T 29-03-2018 IPR006169 GTP1/OBG domain CVS42_RS17225 5e7df37ca016031debd7149b28ae5b9b 400 Pfam PF01926 50S ribosome-binding GTPase 161 284 3.1E-24 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS17225 5e7df37ca016031debd7149b28ae5b9b 400 PIRSF PIRSF002401 1 375 3.6E-139 T 29-03-2018 IPR035101 GTP-binding protein, Obg-type CVS42_RS17225 5e7df37ca016031debd7149b28ae5b9b 400 SUPERFAMILY SSF52540 152 337 1.33E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS17225 5e7df37ca016031debd7149b28ae5b9b 400 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 29-03-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 CVS42_RS00250 df00e1ffa9fa2df451ce2c8eb78de2a4 705 SMART SM00954 235 345 1.5E-59 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CVS42_RS00250 df00e1ffa9fa2df451ce2c8eb78de2a4 705 SUPERFAMILY SSF81271 376 448 1.98E-19 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CVS42_RS00250 df00e1ffa9fa2df451ce2c8eb78de2a4 705 Pfam PF13291 ACT domain 625 702 9.9E-15 T 29-03-2018 IPR002912 ACT domain CVS42_RS00250 df00e1ffa9fa2df451ce2c8eb78de2a4 705 SUPERFAMILY SSF81301 181 393 1.96E-59 T 29-03-2018 CVS42_RS00250 df00e1ffa9fa2df451ce2c8eb78de2a4 705 Pfam PF13328 HD domain 26 175 4.4E-52 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS00250 df00e1ffa9fa2df451ce2c8eb78de2a4 705 SUPERFAMILY SSF55021 628 702 2.43E-7 T 29-03-2018 CVS42_RS00250 df00e1ffa9fa2df451ce2c8eb78de2a4 705 Gene3D G3DSA:3.30.460.10 194 325 2.6E-40 T 29-03-2018 CVS42_RS00250 df00e1ffa9fa2df451ce2c8eb78de2a4 705 SUPERFAMILY SSF109604 3 190 2.01E-73 T 29-03-2018 CVS42_RS00250 df00e1ffa9fa2df451ce2c8eb78de2a4 705 Gene3D G3DSA:3.10.20.30 383 458 1.9E-21 T 29-03-2018 IPR012675 Beta-grasp domain CVS42_RS00250 df00e1ffa9fa2df451ce2c8eb78de2a4 705 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 5.2E-35 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CVS42_RS00250 df00e1ffa9fa2df451ce2c8eb78de2a4 705 SMART SM00471 41 153 1.1E-9 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS00250 df00e1ffa9fa2df451ce2c8eb78de2a4 705 Gene3D G3DSA:3.30.70.260 626 704 2.3E-10 T 29-03-2018 CVS42_RS00250 df00e1ffa9fa2df451ce2c8eb78de2a4 705 Pfam PF02824 TGS domain 389 448 1.3E-17 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CVS42_RS00250 df00e1ffa9fa2df451ce2c8eb78de2a4 705 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 701 1.3E-259 T 29-03-2018 IPR004811 RelA/SpoT family GO:0015969 CVS42_RS10665 66c9cf34796dcf4c7b002db08a38d5ff 334 SUPERFAMILY SSF161098 103 312 2.07E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS10665 66c9cf34796dcf4c7b002db08a38d5ff 334 Gene3D G3DSA:1.10.3720.10 6 318 4.3E-33 T 29-03-2018 CVS42_RS10665 66c9cf34796dcf4c7b002db08a38d5ff 334 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 125 327 9.5E-39 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS05395 b2bb5ead1d7746ddabef2bfba8600dd0 243 SUPERFAMILY SSF53850 25 242 2.12E-43 T 29-03-2018 CVS42_RS05395 b2bb5ead1d7746ddabef2bfba8600dd0 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 242 3.2E-31 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS05395 b2bb5ead1d7746ddabef2bfba8600dd0 243 Gene3D G3DSA:3.40.190.10 119 243 2.0E-16 T 29-03-2018 CVS42_RS05395 b2bb5ead1d7746ddabef2bfba8600dd0 243 SMART SM00062 27 243 2.1E-11 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS05395 b2bb5ead1d7746ddabef2bfba8600dd0 243 Gene3D G3DSA:3.40.190.10 19 118 4.3E-16 T 29-03-2018 CVS42_RS03760 fc313cd87dc5232adc25eff66edb8372 193 Gene3D G3DSA:1.10.1740.10 2 115 2.5E-32 T 29-03-2018 CVS42_RS03760 fc313cd87dc5232adc25eff66edb8372 193 Pfam PF08281 Sigma-70, region 4 135 182 2.0E-19 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03760 fc313cd87dc5232adc25eff66edb8372 193 SUPERFAMILY SSF88659 125 187 7.29E-19 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03760 fc313cd87dc5232adc25eff66edb8372 193 Pfam PF04542 Sigma-70 region 2 26 93 2.9E-19 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03760 fc313cd87dc5232adc25eff66edb8372 193 SUPERFAMILY SSF88946 8 106 1.26E-31 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03760 fc313cd87dc5232adc25eff66edb8372 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 187 2.2E-35 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03760 fc313cd87dc5232adc25eff66edb8372 193 Gene3D G3DSA:1.10.10.10 116 189 2.2E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS03760 fc313cd87dc5232adc25eff66edb8372 193 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 3 191 3.0E-101 T 29-03-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03760 fc313cd87dc5232adc25eff66edb8372 193 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 48 79 - T 29-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS00045 18ed30bbf743c4038e272f23bc748cc3 252 Gene3D G3DSA:3.40.190.10 127 206 9.1E-20 T 29-03-2018 CVS42_RS00045 18ed30bbf743c4038e272f23bc748cc3 252 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 246 6.2E-61 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS00045 18ed30bbf743c4038e272f23bc748cc3 252 Gene3D G3DSA:3.40.190.10 20 126 4.6E-33 T 29-03-2018 CVS42_RS00045 18ed30bbf743c4038e272f23bc748cc3 252 SUPERFAMILY SSF53850 5 249 2.11E-60 T 29-03-2018 CVS42_RS00045 18ed30bbf743c4038e272f23bc748cc3 252 SMART SM00062 27 248 2.9E-74 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS00045 18ed30bbf743c4038e272f23bc748cc3 252 SMART SM00079 27 247 0.004 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CVS42_RS14670 3de8147f5dcc5b09d96c9f0904f7f4c0 307 SUPERFAMILY SSF55120 67 235 5.28E-43 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS14670 3de8147f5dcc5b09d96c9f0904f7f4c0 307 Pfam PF00849 RNA pseudouridylate synthase 67 197 1.1E-17 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS14670 3de8147f5dcc5b09d96c9f0904f7f4c0 307 Gene3D G3DSA:3.30.2350.10 67 289 4.6E-35 T 29-03-2018 CVS42_RS14670 3de8147f5dcc5b09d96c9f0904f7f4c0 307 Gene3D G3DSA:3.10.290.10 1 63 1.1E-15 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS14670 3de8147f5dcc5b09d96c9f0904f7f4c0 307 Pfam PF01479 S4 domain 4 48 2.0E-12 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS14670 3de8147f5dcc5b09d96c9f0904f7f4c0 307 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 231 3.5E-61 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CVS42_RS14670 3de8147f5dcc5b09d96c9f0904f7f4c0 307 SMART SM00363 3 64 2.9E-10 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS14670 3de8147f5dcc5b09d96c9f0904f7f4c0 307 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CVS42_RS14670 3de8147f5dcc5b09d96c9f0904f7f4c0 307 SUPERFAMILY SSF55174 5 97 5.0E-17 T 29-03-2018 CVS42_RS04700 d8acd1513da4683758854780724cc504 1093 Gene3D G3DSA:3.30.70.100 992 1086 2.5E-12 T 29-03-2018 CVS42_RS04700 d8acd1513da4683758854780724cc504 1093 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 954 988 - T 29-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CVS42_RS04700 d8acd1513da4683758854780724cc504 1093 Pfam PF12795 Mechanosensitive ion channel porin domain 38 264 1.8E-33 T 29-03-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain CVS42_RS04700 d8acd1513da4683758854780724cc504 1093 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 488 821 8.8E-93 T 29-03-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CVS42_RS04700 d8acd1513da4683758854780724cc504 1093 SUPERFAMILY SSF82689 993 1091 5.36E-17 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CVS42_RS04700 d8acd1513da4683758854780724cc504 1093 SUPERFAMILY SSF50182 925 990 7.19E-17 T 29-03-2018 IPR010920 LSM domain CVS42_RS04700 d8acd1513da4683758854780724cc504 1093 SUPERFAMILY SSF82861 840 923 7.98E-7 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CVS42_RS04700 d8acd1513da4683758854780724cc504 1093 Gene3D G3DSA:2.30.30.60 940 989 4.4E-12 T 29-03-2018 CVS42_RS04700 d8acd1513da4683758854780724cc504 1093 Pfam PF00924 Mechanosensitive ion channel 883 1079 2.9E-50 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CVS42_RS03955 88e4e1eef93224599f78db07cc0fe32f 289 Gene3D G3DSA:3.40.50.300 1 289 2.6E-43 T 29-03-2018 CVS42_RS03955 88e4e1eef93224599f78db07cc0fe32f 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.3E-29 T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CVS42_RS03955 88e4e1eef93224599f78db07cc0fe32f 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.3E-29 T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CVS42_RS03955 88e4e1eef93224599f78db07cc0fe32f 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.3E-29 T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CVS42_RS03955 88e4e1eef93224599f78db07cc0fe32f 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.3E-29 T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CVS42_RS03955 88e4e1eef93224599f78db07cc0fe32f 289 SUPERFAMILY SSF52540 4 286 7.62E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS03955 88e4e1eef93224599f78db07cc0fe32f 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 1.9E-71 T 29-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 CVS42_RS03955 88e4e1eef93224599f78db07cc0fe32f 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CVS42_RS10905 e3237b74774752c360e2d5d94b6fd702 322 Gene3D G3DSA:3.20.20.70 7 304 7.8E-102 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS10905 e3237b74774752c360e2d5d94b6fd702 322 SUPERFAMILY SSF51569 9 294 1.47E-69 T 29-03-2018 CVS42_RS10905 e3237b74774752c360e2d5d94b6fd702 322 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 238 247 - T 29-03-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111 CVS42_RS10905 e3237b74774752c360e2d5d94b6fd702 322 Pfam PF00682 HMGL-like 12 285 1.9E-50 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CVS42_RS14600 98f85a22561f824420294bb385333dee 374 SUPERFAMILY SSF109604 167 344 1.82E-38 T 29-03-2018 CVS42_RS14600 98f85a22561f824420294bb385333dee 374 Gene3D G3DSA:3.30.450.40 3 139 6.8E-11 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS14600 98f85a22561f824420294bb385333dee 374 SMART SM00471 169 317 7.3E-6 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS14600 98f85a22561f824420294bb385333dee 374 SUPERFAMILY SSF55781 9 145 5.89E-13 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS14600 98f85a22561f824420294bb385333dee 374 Pfam PF01966 HD domain 175 307 1.5E-16 T 29-03-2018 IPR006674 HD domain CVS42_RS14600 98f85a22561f824420294bb385333dee 374 Gene3D G3DSA:1.10.3210.10 140 358 1.2E-45 T 29-03-2018 CVS42_RS20885 782cf94009b14f8d9c86f9d8bf3fc4d3 435 Gene3D G3DSA:1.10.4100.10 245 397 6.6E-9 T 29-03-2018 CVS42_RS20885 782cf94009b14f8d9c86f9d8bf3fc4d3 435 Pfam PF03313 Serine dehydratase alpha chain 93 425 9.4E-53 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CVS42_RS20885 782cf94009b14f8d9c86f9d8bf3fc4d3 435 PIRSF PIRSF006054 7 432 1.6E-157 T 29-03-2018 IPR021144 Uncharacterised protein family UPF0597 CVS42_RS20885 782cf94009b14f8d9c86f9d8bf3fc4d3 435 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 11 430 36.305 T 29-03-2018 IPR021144 Uncharacterised protein family UPF0597 CVS42_RS21765 dbbe9be2446302f7173dd654aa0b6876 190 SUPERFAMILY SSF48150 3 186 1.96E-78 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CVS42_RS21765 dbbe9be2446302f7173dd654aa0b6876 190 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 4 182 4.9E-77 T 29-03-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 CVS42_RS21765 dbbe9be2446302f7173dd654aa0b6876 190 Pfam PF03352 Methyladenine glycosylase 7 182 4.1E-78 T 29-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 CVS42_RS21765 dbbe9be2446302f7173dd654aa0b6876 190 Gene3D G3DSA:1.10.340.30 2 183 1.9E-79 T 29-03-2018 CVS42_RS04985 9ffbe8fca3dfe077c05845d2e5b551dc 192 Gene3D G3DSA:2.50.20.10 20 191 1.1E-47 T 29-03-2018 CVS42_RS04985 9ffbe8fca3dfe077c05845d2e5b551dc 192 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 1 190 25.052 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CVS42_RS04985 9ffbe8fca3dfe077c05845d2e5b551dc 192 SUPERFAMILY SSF89392 16 190 1.57E-46 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CVS42_RS04985 9ffbe8fca3dfe077c05845d2e5b551dc 192 Pfam PF03550 Outer membrane lipoprotein LolB 41 188 2.2E-48 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CVS42_RS04985 9ffbe8fca3dfe077c05845d2e5b551dc 192 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 6 189 3.1E-46 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CVS42_RS11630 275e6d12a3c53a515b28f566d7030c77 546 Pfam PF00990 Diguanylate cyclase, GGDEF domain 116 266 3.1E-18 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS11630 275e6d12a3c53a515b28f566d7030c77 546 SMART SM00052 284 527 2.3E-29 T 29-03-2018 IPR001633 EAL domain CVS42_RS11630 275e6d12a3c53a515b28f566d7030c77 546 SUPERFAMILY SSF55073 121 273 1.57E-16 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS11630 275e6d12a3c53a515b28f566d7030c77 546 SMART SM00267 105 274 4.1E-10 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS11630 275e6d12a3c53a515b28f566d7030c77 546 Pfam PF00563 EAL domain 292 522 1.4E-49 T 29-03-2018 IPR001633 EAL domain CVS42_RS11630 275e6d12a3c53a515b28f566d7030c77 546 Gene3D G3DSA:3.20.20.450 287 526 1.3E-52 T 29-03-2018 IPR001633 EAL domain CVS42_RS11630 275e6d12a3c53a515b28f566d7030c77 546 SUPERFAMILY SSF141868 291 526 3.79E-53 T 29-03-2018 IPR001633 EAL domain CVS42_RS11630 275e6d12a3c53a515b28f566d7030c77 546 Gene3D G3DSA:3.30.70.270 110 286 7.6E-25 T 29-03-2018 CVS42_RS06480 2ef31ea11b7dd2794aab7d055bc3f947 551 SUPERFAMILY SSF58104 250 551 1.14E-75 T 29-03-2018 CVS42_RS06480 2ef31ea11b7dd2794aab7d055bc3f947 551 Pfam PF00672 HAMP domain 215 270 5.1E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS06480 2ef31ea11b7dd2794aab7d055bc3f947 551 Gene3D G3DSA:1.10.287.950 326 551 1.7E-49 T 29-03-2018 CVS42_RS06480 2ef31ea11b7dd2794aab7d055bc3f947 551 Gene3D G3DSA:1.10.287.950 67 325 6.7E-10 T 29-03-2018 CVS42_RS06480 2ef31ea11b7dd2794aab7d055bc3f947 551 SMART SM00304 215 274 1.9E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS06480 2ef31ea11b7dd2794aab7d055bc3f947 551 SMART SM00304 275 327 74.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS06480 2ef31ea11b7dd2794aab7d055bc3f947 551 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 184 1.0E-16 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CVS42_RS06480 2ef31ea11b7dd2794aab7d055bc3f947 551 SMART SM00283 289 550 6.2E-79 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS06480 2ef31ea11b7dd2794aab7d055bc3f947 551 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 355 515 3.8E-40 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 386 411 - T 29-03-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 336 629 4.6E-106 T 29-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 SMART SM01038 750 1019 1.8E-109 T 29-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 SUPERFAMILY SSF49303 224 334 2.24E-23 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 PRINTS PR00132 Glycosyl hydrolase family 2 signature 149 164 6.2E-35 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 PRINTS PR00132 Glycosyl hydrolase family 2 signature 448 463 6.2E-35 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 PRINTS PR00132 Glycosyl hydrolase family 2 signature 345 359 6.2E-35 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 PRINTS PR00132 Glycosyl hydrolase family 2 signature 376 394 6.2E-35 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 PRINTS PR00132 Glycosyl hydrolase family 2 signature 532 547 6.2E-35 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 SUPERFAMILY SSF49785 9 221 3.12E-62 T 29-03-2018 IPR008979 Galactose-binding domain-like CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 Gene3D G3DSA:2.60.120.260 2 221 1.9E-60 T 29-03-2018 IPR008979 Galactose-binding domain-like CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 Gene3D G3DSA:2.60.40.10 626 733 1.6E-20 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 Hamap MF_01687 Beta-galactosidase [lacZ]. 1 1019 16.772 T 29-03-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 Gene3D G3DSA:2.60.40.10 223 334 6.4E-21 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 Pfam PF16353 Domain of unknown function(DUF4981) 640 728 6.3E-15 T 29-03-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 49 221 1.1E-60 T 29-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 Gene3D G3DSA:3.20.20.80 335 625 4.3E-87 T 29-03-2018 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 SUPERFAMILY SSF51445 336 625 5.6E-100 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 SUPERFAMILY SSF49303 622 731 2.88E-25 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 Gene3D G3DSA:2.70.98.10 735 1019 1.4E-75 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 Pfam PF00703 Glycosyl hydrolases family 2 224 334 5.7E-13 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 Pfam PF02929 Beta galactosidase small chain 754 1018 1.3E-61 T 29-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CVS42_RS00700 34c0d183539e429662dba89b6f7cdce5 1019 SUPERFAMILY SSF74650 738 1018 2.35E-85 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CVS42_RS16755 2073c0b84663e0315c47428f99b6de1f 369 Gene3D G3DSA:3.90.870.10 1 212 7.3E-94 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CVS42_RS16755 2073c0b84663e0315c47428f99b6de1f 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 5 199 2.1E-74 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS16755 2073c0b84663e0315c47428f99b6de1f 369 PIRSF PIRSF001259 1 368 2.5E-129 T 29-03-2018 CVS42_RS16755 2073c0b84663e0315c47428f99b6de1f 369 SUPERFAMILY SSF55821 3 203 1.44E-86 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CVS42_RS16755 2073c0b84663e0315c47428f99b6de1f 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 2.9E-83 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS16755 2073c0b84663e0315c47428f99b6de1f 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.638 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS16755 2073c0b84663e0315c47428f99b6de1f 369 SUPERFAMILY SSF142695 205 367 1.7E-47 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CVS42_RS16755 2073c0b84663e0315c47428f99b6de1f 369 Pfam PF00925 GTP cyclohydrolase II 208 367 1.5E-37 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CVS42_RS18515 8c8f65923a12ca579ca829bf1680000a 430 Pfam PF08022 FAD-binding domain 225 295 5.1E-6 T 29-03-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 CVS42_RS18515 8c8f65923a12ca579ca829bf1680000a 430 SUPERFAMILY SSF63380 218 311 1.56E-18 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CVS42_RS18515 8c8f65923a12ca579ca829bf1680000a 430 Pfam PF01794 Ferric reductase like transmembrane component 40 171 2.8E-12 T 29-03-2018 IPR013130 Ferric reductase transmembrane component-like domain CVS42_RS18515 8c8f65923a12ca579ca829bf1680000a 430 Gene3D G3DSA:2.40.30.10 211 300 5.5E-18 T 29-03-2018 CVS42_RS18515 8c8f65923a12ca579ca829bf1680000a 430 Gene3D G3DSA:3.40.50.80 301 424 3.2E-15 T 29-03-2018 CVS42_RS18515 8c8f65923a12ca579ca829bf1680000a 430 SUPERFAMILY SSF52343 299 419 3.93E-20 T 29-03-2018 CVS42_RS15560 31c59fe0ae61df045f509f29fe5d2b97 559 Pfam PF00158 Sigma-54 interaction domain 275 422 4.5E-54 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CVS42_RS15560 31c59fe0ae61df045f509f29fe5d2b97 559 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 524 541 4.2E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS15560 31c59fe0ae61df045f509f29fe5d2b97 559 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 541 559 4.2E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS15560 31c59fe0ae61df045f509f29fe5d2b97 559 SMART SM00382 279 423 7.3E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS15560 31c59fe0ae61df045f509f29fe5d2b97 559 SUPERFAMILY SSF46689 508 557 4.61E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS15560 31c59fe0ae61df045f509f29fe5d2b97 559 Gene3D G3DSA:3.40.50.300 270 429 1.4E-19 T 29-03-2018 CVS42_RS15560 31c59fe0ae61df045f509f29fe5d2b97 559 SUPERFAMILY SSF52540 275 488 2.41E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS15560 31c59fe0ae61df045f509f29fe5d2b97 559 Gene3D G3DSA:1.10.10.60 512 556 8.3E-15 T 29-03-2018 CVS42_RS15560 31c59fe0ae61df045f509f29fe5d2b97 559 Pfam PF01590 GAF domain 89 186 5.1E-5 T 29-03-2018 IPR003018 GAF domain GO:0005515 CVS42_RS15560 31c59fe0ae61df045f509f29fe5d2b97 559 Gene3D G3DSA:1.10.8.60 435 502 2.1E-9 T 29-03-2018 CVS42_RS15560 31c59fe0ae61df045f509f29fe5d2b97 559 Gene3D G3DSA:3.30.450.40 13 195 2.4E-6 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS15560 31c59fe0ae61df045f509f29fe5d2b97 559 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 346 361 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CVS42_RS15560 31c59fe0ae61df045f509f29fe5d2b97 559 Pfam PF02954 Bacterial regulatory protein, Fis family 523 556 3.3E-11 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS15560 31c59fe0ae61df045f509f29fe5d2b97 559 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 283 296 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CVS42_RS00780 88ee071a126be676a2ee662cabb18d73 128 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 88 112 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CVS42_RS00780 88ee071a126be676a2ee662cabb18d73 128 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 83 117 2.0E-12 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CVS42_RS00780 88ee071a126be676a2ee662cabb18d73 128 SUPERFAMILY SSF57716 85 122 5.23E-10 T 29-03-2018 CVS42_RS00780 88ee071a126be676a2ee662cabb18d73 128 SUPERFAMILY SSF109635 3 84 1.31E-15 T 29-03-2018 CVS42_RS00695 2b4c4bbea43ad7cb1936693b419b00c8 335 Gene3D G3DSA:1.10.260.40 2 54 8.7E-22 T 29-03-2018 CVS42_RS00695 2b4c4bbea43ad7cb1936693b419b00c8 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.6E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS00695 2b4c4bbea43ad7cb1936693b419b00c8 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.6E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS00695 2b4c4bbea43ad7cb1936693b419b00c8 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 CVS42_RS00695 2b4c4bbea43ad7cb1936693b419b00c8 335 Gene3D G3DSA:3.40.50.2300 55 175 1.7E-28 T 29-03-2018 CVS42_RS00695 2b4c4bbea43ad7cb1936693b419b00c8 335 SUPERFAMILY SSF47413 2 58 3.7E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS00695 2b4c4bbea43ad7cb1936693b419b00c8 335 SUPERFAMILY SSF53822 61 331 4.52E-81 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CVS42_RS00695 2b4c4bbea43ad7cb1936693b419b00c8 335 SMART SM00354 1 71 1.8E-30 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS00695 2b4c4bbea43ad7cb1936693b419b00c8 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.7E-20 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS00695 2b4c4bbea43ad7cb1936693b419b00c8 335 Pfam PF13377 Periplasmic binding protein-like domain 168 329 1.6E-39 T 29-03-2018 CVS42_RS00695 2b4c4bbea43ad7cb1936693b419b00c8 335 Gene3D G3DSA:3.40.50.2300 176 334 3.9E-47 T 29-03-2018 CVS42_RS11075 a2b8f1ed960988b214d65662c183d89f 251 Pfam PF08483 IstB-like ATP binding N-terminal 23 52 2.7E-6 T 29-03-2018 IPR013690 IstB-like ATP binding N-terminal CVS42_RS11075 a2b8f1ed960988b214d65662c183d89f 251 Pfam PF01695 IstB-like ATP binding protein 53 229 2.9E-62 T 29-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CVS42_RS11075 a2b8f1ed960988b214d65662c183d89f 251 SUPERFAMILY SSF52540 66 238 5.65E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11075 a2b8f1ed960988b214d65662c183d89f 251 PIRSF PIRSF003073 1 251 8.5E-72 T 29-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CVS42_RS11075 a2b8f1ed960988b214d65662c183d89f 251 Gene3D G3DSA:3.40.50.300 45 230 2.2E-17 T 29-03-2018 CVS42_RS19475 a2b8f1ed960988b214d65662c183d89f 251 Pfam PF08483 IstB-like ATP binding N-terminal 23 52 2.7E-6 T 29-03-2018 IPR013690 IstB-like ATP binding N-terminal CVS42_RS19475 a2b8f1ed960988b214d65662c183d89f 251 Pfam PF01695 IstB-like ATP binding protein 53 229 2.9E-62 T 29-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CVS42_RS19475 a2b8f1ed960988b214d65662c183d89f 251 SUPERFAMILY SSF52540 66 238 5.65E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS19475 a2b8f1ed960988b214d65662c183d89f 251 PIRSF PIRSF003073 1 251 8.5E-72 T 29-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CVS42_RS19475 a2b8f1ed960988b214d65662c183d89f 251 Gene3D G3DSA:3.40.50.300 45 230 2.2E-17 T 29-03-2018 CVS42_RS11205 a2b8f1ed960988b214d65662c183d89f 251 Pfam PF08483 IstB-like ATP binding N-terminal 23 52 2.7E-6 T 29-03-2018 IPR013690 IstB-like ATP binding N-terminal CVS42_RS11205 a2b8f1ed960988b214d65662c183d89f 251 Pfam PF01695 IstB-like ATP binding protein 53 229 2.9E-62 T 29-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CVS42_RS11205 a2b8f1ed960988b214d65662c183d89f 251 SUPERFAMILY SSF52540 66 238 5.65E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11205 a2b8f1ed960988b214d65662c183d89f 251 PIRSF PIRSF003073 1 251 8.5E-72 T 29-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CVS42_RS11205 a2b8f1ed960988b214d65662c183d89f 251 Gene3D G3DSA:3.40.50.300 45 230 2.2E-17 T 29-03-2018 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 3.7E-32 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 6.9E-66 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 Pfam PF14492 Elongation Factor G, domain II 410 484 8.1E-34 T 29-03-2018 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 SUPERFAMILY SSF54980 410 487 4.68E-25 T 29-03-2018 IPR035647 EF-G domain III/V-like CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 Gene3D G3DSA:3.30.70.870 406 499 7.9E-38 T 29-03-2018 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 Pfam PF03764 Elongation factor G, domain IV 485 605 1.2E-47 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 Gene3D G3DSA:3.40.50.300 1 293 1.0E-57 T 29-03-2018 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 SMART SM00838 607 694 7.9E-57 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 SUPERFAMILY SSF54211 485 606 1.09E-41 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 Gene3D G3DSA:3.30.230.10 500 620 1.2E-42 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 Pfam PF03144 Elongation factor Tu domain 2 330 397 5.0E-17 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 Gene3D G3DSA:3.30.70.240 621 698 2.5E-30 T 29-03-2018 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 Gene3D G3DSA:2.40.30.10 296 405 1.4E-30 T 29-03-2018 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 SUPERFAMILY SSF50447 271 410 4.42E-36 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 Pfam PF00679 Elongation factor G C-terminus 607 692 4.7E-30 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 111.353 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 SUPERFAMILY SSF54980 610 697 4.6E-29 T 29-03-2018 IPR035647 EF-G domain III/V-like CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 SUPERFAMILY SSF52540 6 287 1.17E-105 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 699 0.0 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 SMART SM00889 486 605 6.8E-72 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CVS42_RS20590 b9a9a1d2edee32126c58b8bb87c0060c 701 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CVS42_RS21100 0d45dc4609429521f0d05c31b903dc8a 469 Gene3D G3DSA:3.10.20.70 2 104 1.9E-28 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CVS42_RS21100 0d45dc4609429521f0d05c31b903dc8a 469 SUPERFAMILY SSF54368 3 100 7.98E-37 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CVS42_RS21100 0d45dc4609429521f0d05c31b903dc8a 469 Gene3D G3DSA:3.30.590.10 105 457 2.7E-121 T 29-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CVS42_RS21100 0d45dc4609429521f0d05c31b903dc8a 469 SUPERFAMILY SSF55931 102 468 1.57E-136 T 29-03-2018 CVS42_RS21100 0d45dc4609429521f0d05c31b903dc8a 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 29-03-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CVS42_RS21100 0d45dc4609429521f0d05c31b903dc8a 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 29-03-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CVS42_RS21100 0d45dc4609429521f0d05c31b903dc8a 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 5.5E-136 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CVS42_RS21100 0d45dc4609429521f0d05c31b903dc8a 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.5E-31 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CVS42_RS21100 0d45dc4609429521f0d05c31b903dc8a 469 SMART SM01230 102 379 2.0E-145 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CVS42_RS21100 0d45dc4609429521f0d05c31b903dc8a 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 29-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CVS42_RS21100 0d45dc4609429521f0d05c31b903dc8a 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 468 2.5E-207 T 29-03-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CVS42_RS19660 50527295117b03a59e3656c126726336 476 Pfam PF02378 Phosphotransferase system, EIIC 112 406 1.5E-32 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CVS42_RS19660 50527295117b03a59e3656c126726336 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 5.6E-17 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CVS42_RS19660 50527295117b03a59e3656c126726336 476 SUPERFAMILY SSF55604 10 83 9.29E-21 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CVS42_RS19660 50527295117b03a59e3656c126726336 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CVS42_RS19660 50527295117b03a59e3656c126726336 476 Pfam PF00367 phosphotransferase system, EIIB 12 43 1.7E-13 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CVS42_RS19660 50527295117b03a59e3656c126726336 476 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 8 462 2.6E-208 T 29-03-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00230+2.7.1.20|KEGG: 00500+2.7.1.201|MetaCyc: PWY-6619 CVS42_RS19660 50527295117b03a59e3656c126726336 476 Gene3D G3DSA:3.30.1360.60 6 82 4.3E-25 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CVS42_RS04320 4ea0699ce72daadede94473ee838e951 264 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 59 230 6.3E-46 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CVS42_RS04320 4ea0699ce72daadede94473ee838e951 264 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 20 254 39.09 T 29-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CVS42_RS04320 4ea0699ce72daadede94473ee838e951 264 PIRSF PIRSF000857 10 259 2.3E-52 T 29-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CVS42_RS04320 4ea0699ce72daadede94473ee838e951 264 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 46 254 2.0E-80 T 29-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CVS42_RS04320 4ea0699ce72daadede94473ee838e951 264 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 32 253 1.5E-83 T 29-03-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 CVS42_RS04320 4ea0699ce72daadede94473ee838e951 264 SUPERFAMILY SSF52402 33 219 2.34E-52 T 29-03-2018 CVS42_RS04320 4ea0699ce72daadede94473ee838e951 264 Gene3D G3DSA:3.40.50.620 21 262 1.8E-36 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS07270 cec1f827699a47f7c35ca086cb5735e1 624 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 98 109 - T 29-03-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site CVS42_RS07270 cec1f827699a47f7c35ca086cb5735e1 624 PRINTS PR00723 Subtilisin serine protease family (S8) signature 93 112 1.6E-15 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CVS42_RS07270 cec1f827699a47f7c35ca086cb5735e1 624 PRINTS PR00723 Subtilisin serine protease family (S8) signature 135 148 1.6E-15 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CVS42_RS07270 cec1f827699a47f7c35ca086cb5735e1 624 PRINTS PR00723 Subtilisin serine protease family (S8) signature 357 373 1.6E-15 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CVS42_RS07270 cec1f827699a47f7c35ca086cb5735e1 624 SUPERFAMILY SSF49785 457 621 1.23E-22 T 29-03-2018 IPR008979 Galactose-binding domain-like CVS42_RS07270 cec1f827699a47f7c35ca086cb5735e1 624 Pfam PF00082 Subtilase family 93 399 1.1E-30 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CVS42_RS07270 cec1f827699a47f7c35ca086cb5735e1 624 Gene3D G3DSA:2.60.120.260 457 609 1.1E-27 T 29-03-2018 IPR008979 Galactose-binding domain-like CVS42_RS07270 cec1f827699a47f7c35ca086cb5735e1 624 SUPERFAMILY SSF52743 349 451 2.09E-60 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CVS42_RS07270 cec1f827699a47f7c35ca086cb5735e1 624 SUPERFAMILY SSF52743 52 315 2.09E-60 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CVS42_RS07270 cec1f827699a47f7c35ca086cb5735e1 624 Gene3D G3DSA:3.40.50.200 42 455 1.0E-55 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CVS42_RS07270 cec1f827699a47f7c35ca086cb5735e1 624 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 139 149 - T 29-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site CVS42_RS07270 cec1f827699a47f7c35ca086cb5735e1 624 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 358 368 - T 29-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site CVS42_RS07270 cec1f827699a47f7c35ca086cb5735e1 624 Pfam PF01483 Proprotein convertase P-domain 496 585 2.1E-16 T 29-03-2018 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 CVS42_RS03495 1db4cfa3138be03be6b531aeac7cf359 365 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 17 362 4.2E-119 T 29-03-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 CVS42_RS03495 1db4cfa3138be03be6b531aeac7cf359 365 SUPERFAMILY SSF55909 4 363 6.07E-138 T 29-03-2018 CVS42_RS03495 1db4cfa3138be03be6b531aeac7cf359 365 Gene3D G3DSA:3.75.10.10 3 365 3.4E-136 T 29-03-2018 CVS42_RS03495 1db4cfa3138be03be6b531aeac7cf359 365 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 8 362 3.0E-170 T 29-03-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 CVS42_RS03495 1db4cfa3138be03be6b531aeac7cf359 365 Hamap MF_01841 Agmatine deiminase [aguA]. 8 363 56.68 T 29-03-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 CVS42_RS10090 0cd75403392e414bcab77b64b4fcf602 413 Gene3D G3DSA:3.40.47.10 6 261 7.2E-85 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS10090 0cd75403392e414bcab77b64b4fcf602 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site CVS42_RS10090 0cd75403392e414bcab77b64b4fcf602 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 1.3E-203 T 29-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CVS42_RS10090 0cd75403392e414bcab77b64b4fcf602 413 Gene3D G3DSA:3.40.47.10 264 413 3.5E-55 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS10090 0cd75403392e414bcab77b64b4fcf602 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 256 370 1.5E-40 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CVS42_RS10090 0cd75403392e414bcab77b64b4fcf602 413 SUPERFAMILY SSF53901 216 412 1.92E-74 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS10090 0cd75403392e414bcab77b64b4fcf602 413 SMART SM00825 Beta-ketoacyl synthase 6 413 1.2E-17 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CVS42_RS10090 0cd75403392e414bcab77b64b4fcf602 413 SUPERFAMILY SSF53901 3 253 9.61E-82 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS10090 0cd75403392e414bcab77b64b4fcf602 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 248 1.8E-65 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CVS42_RS10090 0cd75403392e414bcab77b64b4fcf602 413 PIRSF PIRSF000447 1 413 1.4E-200 T 29-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CVS42_RS22145 f3fd81c44c6633ffad6cb1b96db3e6bb 260 SUPERFAMILY SSF81336 85 253 7.19E-48 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22145 f3fd81c44c6633ffad6cb1b96db3e6bb 260 PRINTS PR00123 ATP synthase A subunit signature 93 109 4.9E-14 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22145 f3fd81c44c6633ffad6cb1b96db3e6bb 260 PRINTS PR00123 ATP synthase A subunit signature 191 213 4.9E-14 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22145 f3fd81c44c6633ffad6cb1b96db3e6bb 260 PRINTS PR00123 ATP synthase A subunit signature 239 254 4.9E-14 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22145 f3fd81c44c6633ffad6cb1b96db3e6bb 260 Pfam PF00119 ATP synthase A chain 35 253 3.0E-56 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22145 f3fd81c44c6633ffad6cb1b96db3e6bb 260 Gene3D G3DSA:1.20.120.220 84 259 2.6E-52 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22145 f3fd81c44c6633ffad6cb1b96db3e6bb 260 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 259 16.058 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22145 f3fd81c44c6633ffad6cb1b96db3e6bb 260 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 24 254 2.2E-42 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22145 f3fd81c44c6633ffad6cb1b96db3e6bb 260 ProSitePatterns PS00449 ATP synthase a subunit signature. 194 203 - T 29-03-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.4E-65 T 29-03-2018 CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.4E-65 T 29-03-2018 CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.4E-65 T 29-03-2018 CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.4E-65 T 29-03-2018 CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.4E-65 T 29-03-2018 CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.4E-65 T 29-03-2018 CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.4E-28 T 29-03-2018 IPR000362 Fumarate lyase family CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.4E-28 T 29-03-2018 IPR000362 Fumarate lyase family CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.4E-28 T 29-03-2018 IPR000362 Fumarate lyase family CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.4E-28 T 29-03-2018 IPR000362 Fumarate lyase family CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 Gene3D G3DSA:1.20.200.10 108 375 2.3E-88 T 29-03-2018 CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 Gene3D G3DSA:1.10.40.30 376 433 1.0E-21 T 29-03-2018 CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 454 1.3E-196 T 29-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 Pfam PF00206 Lyase 6 301 3.2E-93 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.09 T 29-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 SUPERFAMILY SSF48557 3 456 8.01E-136 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 Gene3D G3DSA:1.10.275.10 2 107 9.4E-34 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.9E-20 T 29-03-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS01835 1f693f3e144a6553fa9f64833f7eeba8 461 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CVS42_RS18085 23cee7db5084ffe4ec7c1642bd0891fa 207 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS18085 23cee7db5084ffe4ec7c1642bd0891fa 207 SUPERFAMILY SSF54523 8 135 7.85E-6 T 29-03-2018 CVS42_RS18085 23cee7db5084ffe4ec7c1642bd0891fa 207 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 1.9E-4 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS18085 23cee7db5084ffe4ec7c1642bd0891fa 207 PIRSF PIRSF004525 1 206 1.2E-20 T 29-03-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted CVS42_RS18085 23cee7db5084ffe4ec7c1642bd0891fa 207 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 27 2.5E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS18085 23cee7db5084ffe4ec7c1642bd0891fa 207 Gene3D G3DSA:3.30.700.10 8 180 2.6E-4 T 29-03-2018 CVS42_RS10105 943217720c12496b708d64033d533cb5 311 PIRSF PIRSF000446 1 311 8.3E-131 T 29-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CVS42_RS10105 943217720c12496b708d64033d533cb5 311 SUPERFAMILY SSF52151 190 307 1.83E-79 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CVS42_RS10105 943217720c12496b708d64033d533cb5 311 SUPERFAMILY SSF52151 4 122 1.83E-79 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CVS42_RS10105 943217720c12496b708d64033d533cb5 311 Pfam PF00698 Acyl transferase domain 8 282 3.9E-37 T 29-03-2018 IPR014043 Acyl transferase CVS42_RS10105 943217720c12496b708d64033d533cb5 311 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 297 2.3E-40 T 29-03-2018 IPR020801 Polyketide synthase, acyl transferase domain CVS42_RS10105 943217720c12496b708d64033d533cb5 311 Gene3D G3DSA:3.40.366.10 186 311 6.4E-30 T 29-03-2018 CVS42_RS10105 943217720c12496b708d64033d533cb5 311 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 290 1.4E-123 T 29-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CVS42_RS10105 943217720c12496b708d64033d533cb5 311 Gene3D G3DSA:3.40.366.10 1 185 7.4E-51 T 29-03-2018 CVS42_RS10105 943217720c12496b708d64033d533cb5 311 SUPERFAMILY SSF55048 128 197 8.76E-17 T 29-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CVS42_RS10025 414ec5d02d3e19ade244da86d8347a79 375 PRINTS PR00143 Citrate synthase signature 251 271 8.0E-40 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CVS42_RS10025 414ec5d02d3e19ade244da86d8347a79 375 PRINTS PR00143 Citrate synthase signature 328 342 8.0E-40 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CVS42_RS10025 414ec5d02d3e19ade244da86d8347a79 375 PRINTS PR00143 Citrate synthase signature 126 139 8.0E-40 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CVS42_RS10025 414ec5d02d3e19ade244da86d8347a79 375 PRINTS PR00143 Citrate synthase signature 176 191 8.0E-40 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CVS42_RS10025 414ec5d02d3e19ade244da86d8347a79 375 PRINTS PR00143 Citrate synthase signature 198 226 8.0E-40 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CVS42_RS10025 414ec5d02d3e19ade244da86d8347a79 375 PRINTS PR00143 Citrate synthase signature 308 324 8.0E-40 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CVS42_RS10025 414ec5d02d3e19ade244da86d8347a79 375 Gene3D G3DSA:1.10.580.10 16 263 1.6E-78 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain CVS42_RS10025 414ec5d02d3e19ade244da86d8347a79 375 Gene3D G3DSA:1.10.580.10 304 355 9.4E-10 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain CVS42_RS10025 414ec5d02d3e19ade244da86d8347a79 375 SUPERFAMILY SSF48256 10 375 7.72E-127 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CVS42_RS10025 414ec5d02d3e19ade244da86d8347a79 375 Pfam PF00285 Citrate synthase, C-terminal domain 11 357 2.0E-118 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CVS42_RS10025 414ec5d02d3e19ade244da86d8347a79 375 ProSitePatterns PS00480 Citrate synthase signature. 258 270 - T 29-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CVS42_RS10025 414ec5d02d3e19ade244da86d8347a79 375 PIRSF PIRSF001369 7 375 1.3E-118 T 29-03-2018 IPR024176 Citrate synthase, bacterial-type CVS42_RS10025 414ec5d02d3e19ade244da86d8347a79 375 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 375 2.0E-152 T 29-03-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 CVS42_RS16815 c2ef8ca15bc1d37fc5dc7356fa8685f9 830 Gene3D G3DSA:3.40.228.10 449 517 0.018 T 29-03-2018 CVS42_RS16815 c2ef8ca15bc1d37fc5dc7356fa8685f9 830 Gene3D G3DSA:2.40.40.20 657 814 3.0E-32 T 29-03-2018 CVS42_RS16815 c2ef8ca15bc1d37fc5dc7356fa8685f9 830 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 501 518 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CVS42_RS16815 c2ef8ca15bc1d37fc5dc7356fa8685f9 830 Gene3D G3DSA:3.90.55.10 524 603 2.0E-20 T 29-03-2018 CVS42_RS16815 c2ef8ca15bc1d37fc5dc7356fa8685f9 830 Gene3D G3DSA:3.90.55.10 38 124 2.7E-15 T 29-03-2018 CVS42_RS16815 c2ef8ca15bc1d37fc5dc7356fa8685f9 830 SUPERFAMILY SSF53706 45 660 4.32E-163 T 29-03-2018 CVS42_RS16815 c2ef8ca15bc1d37fc5dc7356fa8685f9 830 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 44 819 0.0 T 29-03-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 CVS42_RS16815 c2ef8ca15bc1d37fc5dc7356fa8685f9 830 Gene3D G3DSA:3.40.228.10 604 656 6.5E-8 T 29-03-2018 CVS42_RS16815 c2ef8ca15bc1d37fc5dc7356fa8685f9 830 Gene3D G3DSA:3.40.228.10 183 436 3.1E-51 T 29-03-2018 CVS42_RS16815 c2ef8ca15bc1d37fc5dc7356fa8685f9 830 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 3.1E-23 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CVS42_RS16815 c2ef8ca15bc1d37fc5dc7356fa8685f9 830 SUPERFAMILY SSF50692 669 818 4.97E-45 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CVS42_RS16815 c2ef8ca15bc1d37fc5dc7356fa8685f9 830 Pfam PF00384 Molybdopterin oxidoreductase 87 558 3.5E-89 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS01200 0678c5d2e02d6a6231f23763a0577406 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 29-03-2018 CVS42_RS01200 0678c5d2e02d6a6231f23763a0577406 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.607 T 29-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS01200 0678c5d2e02d6a6231f23763a0577406 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 7.6E-23 T 29-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS01200 0678c5d2e02d6a6231f23763a0577406 329 Gene3D G3DSA:1.10.150.20 245 328 7.6E-29 T 29-03-2018 CVS42_RS01200 0678c5d2e02d6a6231f23763a0577406 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 9.2E-111 T 29-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS01200 0678c5d2e02d6a6231f23763a0577406 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 7.5E-24 T 29-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS01200 0678c5d2e02d6a6231f23763a0577406 329 SUPERFAMILY SSF56553 53 178 6.98E-41 T 29-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS01200 0678c5d2e02d6a6231f23763a0577406 329 SMART SM00662 23 234 4.8E-103 T 29-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS01200 0678c5d2e02d6a6231f23763a0577406 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 29-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS01200 0678c5d2e02d6a6231f23763a0577406 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.2E-23 T 29-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS01200 0678c5d2e02d6a6231f23763a0577406 329 SUPERFAMILY SSF55257 179 233 7.85E-29 T 29-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS01200 0678c5d2e02d6a6231f23763a0577406 329 SUPERFAMILY SSF55257 7 53 7.85E-29 T 29-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS01200 0678c5d2e02d6a6231f23763a0577406 329 Gene3D G3DSA:3.30.1360.10 4 90 1.5E-18 T 29-03-2018 CVS42_RS01200 0678c5d2e02d6a6231f23763a0577406 329 Gene3D G3DSA:3.30.1360.10 113 231 1.0E-25 T 29-03-2018 CVS42_RS04580 95fc5246182c4804574f43231136f7ad 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 8.6E-190 T 29-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CVS42_RS04580 95fc5246182c4804574f43231136f7ad 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 55.444 T 29-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CVS42_RS04580 95fc5246182c4804574f43231136f7ad 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 337 4.8E-78 T 29-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CVS42_RS04580 95fc5246182c4804574f43231136f7ad 347 SUPERFAMILY SSF51412 6 336 4.32E-99 T 29-03-2018 CVS42_RS04580 95fc5246182c4804574f43231136f7ad 347 Gene3D G3DSA:3.20.20.70 8 341 2.1E-82 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS04580 95fc5246182c4804574f43231136f7ad 347 SMART SM01240 7 344 1.3E-135 T 29-03-2018 CVS42_RS04580 95fc5246182c4804574f43231136f7ad 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 29-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CVS42_RS04580 95fc5246182c4804574f43231136f7ad 347 PIRSF PIRSF000235 1 347 2.6E-193 T 29-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CVS42_RS19100 7b8382ad39020e5d56259ce7979a56c3 405 PIRSF PIRSF038885 1 405 1.9E-157 T 29-03-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 CVS42_RS19100 7b8382ad39020e5d56259ce7979a56c3 405 SUPERFAMILY SSF81648 201 370 3.53E-47 T 29-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 CVS42_RS19100 7b8382ad39020e5d56259ce7979a56c3 405 Pfam PF00033 Cytochrome b/b6/petB 25 212 8.2E-67 T 29-03-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 CVS42_RS19100 7b8382ad39020e5d56259ce7979a56c3 405 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 279 380 2.8E-41 T 29-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 CVS42_RS19100 7b8382ad39020e5d56259ce7979a56c3 405 SUPERFAMILY SSF81342 8 269 1.88E-95 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CVS42_RS19100 7b8382ad39020e5d56259ce7979a56c3 405 Gene3D G3DSA:1.20.810.10 7 400 1.1E-158 T 29-03-2018 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 CVS42_RS03490 0c917558b5e70c58fe0e835aaf67b175 317 Gene3D G3DSA:3.40.190.10 94 184 2.4E-9 T 29-03-2018 CVS42_RS03490 0c917558b5e70c58fe0e835aaf67b175 317 Pfam PF03466 LysR substrate binding domain 95 313 1.7E-21 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS03490 0c917558b5e70c58fe0e835aaf67b175 317 SUPERFAMILY SSF53850 90 313 7.06E-34 T 29-03-2018 CVS42_RS03490 0c917558b5e70c58fe0e835aaf67b175 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 4.4E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS03490 0c917558b5e70c58fe0e835aaf67b175 317 SUPERFAMILY SSF46785 2 84 1.03E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS03490 0c917558b5e70c58fe0e835aaf67b175 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS03490 0c917558b5e70c58fe0e835aaf67b175 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS03490 0c917558b5e70c58fe0e835aaf67b175 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS03490 0c917558b5e70c58fe0e835aaf67b175 317 Gene3D G3DSA:1.10.10.10 1 90 1.6E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS03490 0c917558b5e70c58fe0e835aaf67b175 317 Gene3D G3DSA:3.40.190.10 185 286 1.9E-15 T 29-03-2018 CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 SUPERFAMILY SSF55785 626 743 6.46E-9 T 29-03-2018 IPR000014 PAS domain CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 SUPERFAMILY SSF55874 846 1009 5.5E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 SUPERFAMILY SSF52172 1032 1149 1.99E-17 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 Pfam PF12860 PAS fold 636 749 5.2E-46 T 29-03-2018 CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 SMART SM00388 790 856 7.8E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 Gene3D G3DSA:3.40.50.2300 1014 1151 1.5E-17 T 29-03-2018 CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 SMART SM00387 900 1011 1.2E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 901 1010 3.7E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 SMART SM00448 1032 1145 2.8E-10 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 SUPERFAMILY SSF47384 774 857 9.61E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 Gene3D G3DSA:3.30.450.20 630 794 1.2E-20 T 29-03-2018 CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 Pfam PF00512 His Kinase A (phospho-acceptor) domain 790 856 8.5E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 Gene3D G3DSA:3.30.565.10 861 1013 5.8E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 Gene3D G3DSA:1.10.287.130 795 852 5.3E-13 T 29-03-2018 CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 Pfam PF00072 Response regulator receiver domain 1034 1144 9.7E-9 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 PRINTS PR00344 Bacterial sensor protein C-terminal signature 971 989 3.7E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 PRINTS PR00344 Bacterial sensor protein C-terminal signature 954 964 3.7E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 PRINTS PR00344 Bacterial sensor protein C-terminal signature 936 950 3.7E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS04160 a2b5ca6d0dba4e6d39bd0394d05fdce7 1151 PRINTS PR00344 Bacterial sensor protein C-terminal signature 995 1008 3.7E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS03680 492e306cf1267341cfd18edf2bc3f38d 336 SUPERFAMILY SSF51735 2 176 1.02E-54 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS03680 492e306cf1267341cfd18edf2bc3f38d 336 Gene3D G3DSA:3.40.50.720 1 163 3.8E-65 T 29-03-2018 CVS42_RS03680 492e306cf1267341cfd18edf2bc3f38d 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 104 4.7E-34 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03680 492e306cf1267341cfd18edf2bc3f38d 336 Gene3D G3DSA:3.30.360.10 164 317 3.6E-55 T 29-03-2018 CVS42_RS03680 492e306cf1267341cfd18edf2bc3f38d 336 PIRSF PIRSF000149 1 336 3.5E-134 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03680 492e306cf1267341cfd18edf2bc3f38d 336 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 336 66.422 T 29-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 CVS42_RS03680 492e306cf1267341cfd18edf2bc3f38d 336 SUPERFAMILY SSF55347 154 316 4.76E-59 T 29-03-2018 CVS42_RS03680 492e306cf1267341cfd18edf2bc3f38d 336 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 327 2.4E-166 T 29-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 CVS42_RS03680 492e306cf1267341cfd18edf2bc3f38d 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 315 1.6E-55 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03680 492e306cf1267341cfd18edf2bc3f38d 336 SMART SM00846 2 154 3.5E-83 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03680 492e306cf1267341cfd18edf2bc3f38d 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 1.7E-29 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03680 492e306cf1267341cfd18edf2bc3f38d 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 1.7E-29 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03680 492e306cf1267341cfd18edf2bc3f38d 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 1.7E-29 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03680 492e306cf1267341cfd18edf2bc3f38d 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 1.7E-29 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03680 492e306cf1267341cfd18edf2bc3f38d 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 1.7E-29 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS04570 b823c38c0ba4420b32c865a6b39f841b 188 Pfam PF09285 Elongation factor P, C-terminal 130 186 2.8E-18 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CVS42_RS04570 b823c38c0ba4420b32c865a6b39f841b 188 SUPERFAMILY SSF50104 1 63 3.86E-17 T 29-03-2018 IPR008991 Translation protein SH3-like domain CVS42_RS04570 b823c38c0ba4420b32c865a6b39f841b 188 Gene3D G3DSA:2.40.50.140 130 186 5.4E-19 T 29-03-2018 CVS42_RS04570 b823c38c0ba4420b32c865a6b39f841b 188 Gene3D G3DSA:2.30.30.30 2 61 2.8E-18 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CVS42_RS04570 b823c38c0ba4420b32c865a6b39f841b 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 122 1.9E-15 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CVS42_RS04570 b823c38c0ba4420b32c865a6b39f841b 188 Gene3D G3DSA:2.40.50.140 65 127 1.3E-19 T 29-03-2018 CVS42_RS04570 b823c38c0ba4420b32c865a6b39f841b 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 2.4E-19 T 29-03-2018 IPR013185 Translation elongation factor, KOW-like CVS42_RS04570 b823c38c0ba4420b32c865a6b39f841b 188 Hamap MF_00141 Elongation factor P [efp]. 1 187 45.538 T 29-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CVS42_RS04570 b823c38c0ba4420b32c865a6b39f841b 188 TIGRFAM TIGR00038 efp: translation elongation factor P 3 187 1.2E-58 T 29-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CVS42_RS04570 b823c38c0ba4420b32c865a6b39f841b 188 SMART SM00841 130 186 2.3E-19 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CVS42_RS04570 b823c38c0ba4420b32c865a6b39f841b 188 SUPERFAMILY SSF50249 65 128 8.57E-15 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS04570 b823c38c0ba4420b32c865a6b39f841b 188 PIRSF PIRSF005901 1 188 2.6E-53 T 29-03-2018 IPR020599 Translation elongation factor P/YeiP CVS42_RS04570 b823c38c0ba4420b32c865a6b39f841b 188 SMART SM01185 67 122 4.8E-18 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CVS42_RS04570 b823c38c0ba4420b32c865a6b39f841b 188 SUPERFAMILY SSF50249 130 187 9.42E-12 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 SUPERFAMILY SSF81296 784 885 1.15E-36 T 29-03-2018 IPR014756 Immunoglobulin E-set CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 SUPERFAMILY SSF51445 333 772 5.42E-134 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 SUPERFAMILY SSF49384 28 200 7.11E-63 T 29-03-2018 IPR008965 Carbohydrate-binding domain GO:0030246 CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 PRINTS PR00738 Glycosyl hydrolase family 20 signature 433 450 1.1E-36 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 PRINTS PR00738 Glycosyl hydrolase family 20 signature 500 518 1.1E-36 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 PRINTS PR00738 Glycosyl hydrolase family 20 signature 327 344 1.1E-36 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 PRINTS PR00738 Glycosyl hydrolase family 20 signature 750 767 1.1E-36 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 PRINTS PR00738 Glycosyl hydrolase family 20 signature 732 748 1.1E-36 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 PRINTS PR00738 Glycosyl hydrolase family 20 signature 294 314 1.1E-36 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 PRINTS PR00738 Glycosyl hydrolase family 20 signature 356 377 1.1E-36 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 PRINTS PR00738 Glycosyl hydrolase family 20 signature 527 540 1.1E-36 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 Gene3D G3DSA:2.60.40.10 823 886 1.4E-8 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 217 330 3.9E-12 T 29-03-2018 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 Pfam PF03173 Putative carbohydrate binding domain 37 196 3.0E-62 T 29-03-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 809 883 2.7E-28 T 29-03-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 SUPERFAMILY SSF55545 205 332 5.89E-21 T 29-03-2018 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 Gene3D G3DSA:3.30.379.10 210 330 4.0E-12 T 29-03-2018 CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 333 768 4.7E-112 T 29-03-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 Gene3D G3DSA:3.20.20.80 331 821 2.7E-112 T 29-03-2018 CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 SMART SM01081 36 198 8.6E-96 T 29-03-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CVS42_RS13925 a2f487cf082d67f66481dc6ee9a215f7 887 Gene3D G3DSA:2.60.40.290 27 169 6.8E-38 T 29-03-2018 CVS42_RS20910 e38512064ecc153d7230a1c4b982b6f3 387 SUPERFAMILY SSF56796 1 366 3.93E-105 T 29-03-2018 CVS42_RS20910 e38512064ecc153d7230a1c4b982b6f3 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 356 2.0E-89 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CVS42_RS20910 e38512064ecc153d7230a1c4b982b6f3 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CVS42_RS20910 e38512064ecc153d7230a1c4b982b6f3 387 Gene3D G3DSA:1.20.1090.10 184 387 8.6E-40 T 29-03-2018 CVS42_RS20910 e38512064ecc153d7230a1c4b982b6f3 387 Gene3D G3DSA:3.40.50.1970 9 183 7.5E-43 T 29-03-2018 CVS42_RS20910 e38512064ecc153d7230a1c4b982b6f3 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CVS42_RS18310 246359d84127045aa9a0743317123d0b 335 Gene3D G3DSA:3.40.190.10 163 303 1.1E-17 T 29-03-2018 CVS42_RS18310 246359d84127045aa9a0743317123d0b 335 SUPERFAMILY SSF53850 23 330 1.0E-76 T 29-03-2018 CVS42_RS18310 246359d84127045aa9a0743317123d0b 335 PIRSF PIRSF002825 2 335 2.2E-95 T 29-03-2018 IPR026045 Ferric binding protein CVS42_RS18310 246359d84127045aa9a0743317123d0b 335 Pfam PF13343 Bacterial extracellular solute-binding protein 71 298 3.9E-22 T 29-03-2018 CVS42_RS18310 246359d84127045aa9a0743317123d0b 335 Gene3D G3DSA:3.40.190.10 21 162 2.0E-22 T 29-03-2018 CVS42_RS02770 c475cd196b707a4e89e6621c569030b6 678 Gene3D G3DSA:2.40.50.140 559 646 6.3E-6 T 29-03-2018 CVS42_RS02770 c475cd196b707a4e89e6621c569030b6 678 Pfam PF00575 S1 RNA binding domain 561 640 3.6E-5 T 29-03-2018 IPR003029 S1 domain GO:0003676 CVS42_RS02770 c475cd196b707a4e89e6621c569030b6 678 SUPERFAMILY SSF50249 561 643 9.0E-15 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS02770 c475cd196b707a4e89e6621c569030b6 678 Pfam PF08206 Ribonuclease B OB domain 24 76 4.1E-16 T 29-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain CVS42_RS02770 c475cd196b707a4e89e6621c569030b6 678 Pfam PF00773 RNB domain 191 516 3.5E-81 T 29-03-2018 CVS42_RS02770 c475cd196b707a4e89e6621c569030b6 678 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 645 42.117 T 29-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 CVS42_RS02770 c475cd196b707a4e89e6621c569030b6 678 SUPERFAMILY SSF50249 8 80 3.03E-13 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS02770 c475cd196b707a4e89e6621c569030b6 678 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 643 1.1E-187 T 29-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CVS42_RS02770 c475cd196b707a4e89e6621c569030b6 678 SMART SM00357 23 79 6.2E-9 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CVS42_RS02770 c475cd196b707a4e89e6621c569030b6 678 SUPERFAMILY SSF50249 181 556 4.71E-109 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS02770 c475cd196b707a4e89e6621c569030b6 678 SMART SM00955 191 517 1.4E-118 T 29-03-2018 CVS42_RS02770 c475cd196b707a4e89e6621c569030b6 678 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 29-03-2018 IPR022966 Ribonuclease II/R, conserved site CVS42_RS02770 c475cd196b707a4e89e6621c569030b6 678 SUPERFAMILY SSF50249 84 170 3.71E-24 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS02770 c475cd196b707a4e89e6621c569030b6 678 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 644 7.1E-272 T 29-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 CVS42_RS21505 86eccbc08abb4cce3c05c09d4a534389 208 Pfam PF02630 SCO1/SenC 9 177 1.4E-28 T 29-03-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CVS42_RS21505 86eccbc08abb4cce3c05c09d4a534389 208 Gene3D G3DSA:3.40.30.10 27 203 1.5E-28 T 29-03-2018 CVS42_RS21505 86eccbc08abb4cce3c05c09d4a534389 208 SUPERFAMILY SSF52833 38 187 1.51E-44 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS15935 be46a0af7779c0d1625ee5fca634b2fa 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 136 3.8E-52 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CVS42_RS15935 be46a0af7779c0d1625ee5fca634b2fa 140 SUPERFAMILY SSF53098 5 137 1.14E-41 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS15935 be46a0af7779c0d1625ee5fca634b2fa 140 Pfam PF03652 Holliday junction resolvase 5 136 5.7E-40 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CVS42_RS15935 be46a0af7779c0d1625ee5fca634b2fa 140 SMART SM00732 4 104 5.5E-41 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CVS42_RS15935 be46a0af7779c0d1625ee5fca634b2fa 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 25.683 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CVS42_RS15935 be46a0af7779c0d1625ee5fca634b2fa 140 Gene3D G3DSA:3.30.420.140 2 140 3.5E-40 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CVS42_RS01745 79ab8b8a4229e0620a4bb1b9a3fa8017 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CVS42_RS01745 79ab8b8a4229e0620a4bb1b9a3fa8017 865 SUPERFAMILY SSF74778 2 160 4.32E-66 T 29-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CVS42_RS01745 79ab8b8a4229e0620a4bb1b9a3fa8017 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CVS42_RS01745 79ab8b8a4229e0620a4bb1b9a3fa8017 865 Gene3D G3DSA:3.30.499.10 402 520 3.0E-10 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS01745 79ab8b8a4229e0620a4bb1b9a3fa8017 865 Gene3D G3DSA:3.30.499.10 683 865 1.4E-52 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS01745 79ab8b8a4229e0620a4bb1b9a3fa8017 865 Gene3D G3DSA:3.40.1060.10 521 682 6.5E-29 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS01745 79ab8b8a4229e0620a4bb1b9a3fa8017 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 29-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CVS42_RS01745 79ab8b8a4229e0620a4bb1b9a3fa8017 865 PIRSF PIRSF036687 1 859 0.0 T 29-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CVS42_RS01745 79ab8b8a4229e0620a4bb1b9a3fa8017 865 Gene3D G3DSA:3.20.19.10 162 363 2.6E-34 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CVS42_RS01745 79ab8b8a4229e0620a4bb1b9a3fa8017 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.7E-41 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS01745 79ab8b8a4229e0620a4bb1b9a3fa8017 865 Pfam PF11791 Aconitate B N-terminal domain 5 156 1.2E-64 T 29-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CVS42_RS01745 79ab8b8a4229e0620a4bb1b9a3fa8017 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.4E-99 T 29-03-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CVS42_RS01745 79ab8b8a4229e0620a4bb1b9a3fa8017 865 SUPERFAMILY SSF53732 379 859 1.44E-151 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS01745 79ab8b8a4229e0620a4bb1b9a3fa8017 865 SUPERFAMILY SSF52016 162 372 2.62E-72 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CVS42_RS20085 bb45a0b905a159c51801a839970ba482 252 Pfam PF00899 ThiF family 10 241 7.7E-62 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CVS42_RS20085 bb45a0b905a159c51801a839970ba482 252 Gene3D G3DSA:3.40.50.720 1 246 1.2E-74 T 29-03-2018 CVS42_RS20085 bb45a0b905a159c51801a839970ba482 252 SUPERFAMILY SSF69572 2 247 1.96E-86 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CVS42_RS10100 c7533319d56d22f782ea98c59ad42acf 244 Gene3D G3DSA:3.40.50.720 49 244 8.0E-68 T 29-03-2018 CVS42_RS10100 c7533319d56d22f782ea98c59ad42acf 244 Gene3D G3DSA:3.40.50.720 1 48 4.1E-11 T 29-03-2018 CVS42_RS10100 c7533319d56d22f782ea98c59ad42acf 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 3.3E-101 T 29-03-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CVS42_RS10100 c7533319d56d22f782ea98c59ad42acf 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 6.4E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10100 c7533319d56d22f782ea98c59ad42acf 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 6.4E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10100 c7533319d56d22f782ea98c59ad42acf 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.4E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10100 c7533319d56d22f782ea98c59ad42acf 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.4E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10100 c7533319d56d22f782ea98c59ad42acf 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 6.4E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10100 c7533319d56d22f782ea98c59ad42acf 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 6.4E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10100 c7533319d56d22f782ea98c59ad42acf 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CVS42_RS10100 c7533319d56d22f782ea98c59ad42acf 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 182 4.2E-5 T 29-03-2018 CVS42_RS10100 c7533319d56d22f782ea98c59ad42acf 244 SUPERFAMILY SSF51735 5 243 1.73E-87 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS10100 c7533319d56d22f782ea98c59ad42acf 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.5E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10100 c7533319d56d22f782ea98c59ad42acf 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.5E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10100 c7533319d56d22f782ea98c59ad42acf 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.5E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10100 c7533319d56d22f782ea98c59ad42acf 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 2.0E-69 T 29-03-2018 CVS42_RS21590 fdd09a1f3c15dd22928e7d5da240a046 270 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 4.0E-5 T 29-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CVS42_RS21590 fdd09a1f3c15dd22928e7d5da240a046 270 SUPERFAMILY SSF46946 131 222 1.18E-30 T 29-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CVS42_RS21590 fdd09a1f3c15dd22928e7d5da240a046 270 SMART SM01232 130 222 4.6E-49 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CVS42_RS21590 fdd09a1f3c15dd22928e7d5da240a046 270 Gene3D G3DSA:1.10.8.50 125 270 1.6E-49 T 29-03-2018 CVS42_RS21590 fdd09a1f3c15dd22928e7d5da240a046 270 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 113 1.4E-27 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CVS42_RS21590 fdd09a1f3c15dd22928e7d5da240a046 270 SMART SM00898 2 115 9.6E-48 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CVS42_RS21590 fdd09a1f3c15dd22928e7d5da240a046 270 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 29-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 CVS42_RS21590 fdd09a1f3c15dd22928e7d5da240a046 270 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 6.1E-89 T 29-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CVS42_RS21590 fdd09a1f3c15dd22928e7d5da240a046 270 SUPERFAMILY SSF57716 218 269 3.42E-15 T 29-03-2018 CVS42_RS21590 fdd09a1f3c15dd22928e7d5da240a046 270 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 42.426 T 29-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CVS42_RS21590 fdd09a1f3c15dd22928e7d5da240a046 270 SUPERFAMILY SSF81624 2 139 2.35E-38 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CVS42_RS21590 fdd09a1f3c15dd22928e7d5da240a046 270 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 5.8E-27 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CVS42_RS21590 fdd09a1f3c15dd22928e7d5da240a046 270 Gene3D G3DSA:3.20.190.10 1 124 7.0E-36 T 29-03-2018 CVS42_RS09325 8aea6407a138d9b8621a9b112d40bd2d 507 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 363 383 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CVS42_RS09325 8aea6407a138d9b8621a9b112d40bd2d 507 Pfam PF00860 Permease family 23 414 1.5E-100 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CVS42_RS09325 8aea6407a138d9b8621a9b112d40bd2d 507 TIGRFAM TIGR03173 pbuX: xanthine permease 28 447 2.1E-127 T 29-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 CVS42_RS09325 8aea6407a138d9b8621a9b112d40bd2d 507 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 19 445 1.0E-126 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CVS42_RS09445 e32e5cbfc65abcd09d0d8df9ae95ca77 558 Gene3D G3DSA:2.30.38.10 373 454 1.8E-24 T 29-03-2018 CVS42_RS09445 e32e5cbfc65abcd09d0d8df9ae95ca77 558 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 29-03-2018 IPR020845 AMP-binding, conserved site CVS42_RS09445 e32e5cbfc65abcd09d0d8df9ae95ca77 558 Gene3D G3DSA:3.40.50.980 20 216 5.8E-43 T 29-03-2018 CVS42_RS09445 e32e5cbfc65abcd09d0d8df9ae95ca77 558 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 7.6E-20 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CVS42_RS09445 e32e5cbfc65abcd09d0d8df9ae95ca77 558 Pfam PF00501 AMP-binding enzyme 29 461 2.9E-106 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CVS42_RS09445 e32e5cbfc65abcd09d0d8df9ae95ca77 558 Gene3D G3DSA:3.40.50.980 217 372 9.9E-39 T 29-03-2018 CVS42_RS09445 e32e5cbfc65abcd09d0d8df9ae95ca77 558 Gene3D G3DSA:3.30.300.30 456 558 7.5E-27 T 29-03-2018 CVS42_RS09445 e32e5cbfc65abcd09d0d8df9ae95ca77 558 SUPERFAMILY SSF56801 18 554 6.28E-149 T 29-03-2018 CVS42_RS12105 47c6dbc7b89c35cccddd9a8738b922bb 601 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 106 161 1.0E-26 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12105 47c6dbc7b89c35cccddd9a8738b922bb 601 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 212 601 42.662 T 29-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12105 47c6dbc7b89c35cccddd9a8738b922bb 601 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 52 178 1.3E-38 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12105 47c6dbc7b89c35cccddd9a8738b922bb 601 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 253 264 - T 29-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12105 47c6dbc7b89c35cccddd9a8738b922bb 601 SUPERFAMILY SSF56762 226 601 8.24E-122 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12105 47c6dbc7b89c35cccddd9a8738b922bb 601 Gene3D G3DSA:1.10.645.10 406 597 3.8E-34 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12105 47c6dbc7b89c35cccddd9a8738b922bb 601 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 330 601 2.9E-105 T 29-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12105 47c6dbc7b89c35cccddd9a8738b922bb 601 Gene3D G3DSA:1.10.645.10 212 404 1.5E-46 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12105 47c6dbc7b89c35cccddd9a8738b922bb 601 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 17 601 69.93 T 29-03-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 CVS42_RS12105 47c6dbc7b89c35cccddd9a8738b922bb 601 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 216 601 3.3E-170 T 29-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12105 47c6dbc7b89c35cccddd9a8738b922bb 601 SUPERFAMILY SSF143243 26 230 5.36E-57 T 29-03-2018 CVS42_RS12105 47c6dbc7b89c35cccddd9a8738b922bb 601 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 50 177 1.9E-38 T 29-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS04185 2f246da4e353e1dc9e28a67a5db8cbe7 638 Pfam PF00182 Chitinase class I 174 399 3.2E-38 T 29-03-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CVS42_RS04185 2f246da4e353e1dc9e28a67a5db8cbe7 638 Gene3D G3DSA:1.10.530.10 152 407 7.9E-64 T 29-03-2018 CVS42_RS04185 2f246da4e353e1dc9e28a67a5db8cbe7 638 SMART SM00495 22 71 3.1E-6 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04185 2f246da4e353e1dc9e28a67a5db8cbe7 638 SMART SM00495 583 634 8.6E-6 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04185 2f246da4e353e1dc9e28a67a5db8cbe7 638 SUPERFAMILY SSF51055 20 72 2.16E-8 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04185 2f246da4e353e1dc9e28a67a5db8cbe7 638 SUPERFAMILY SSF53955 154 414 4.5E-61 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS04185 2f246da4e353e1dc9e28a67a5db8cbe7 638 Gene3D G3DSA:2.10.10.20 17 73 1.2E-11 T 29-03-2018 CVS42_RS04185 2f246da4e353e1dc9e28a67a5db8cbe7 638 Gene3D G3DSA:2.60.40.10 477 573 5.1E-14 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS04185 2f246da4e353e1dc9e28a67a5db8cbe7 638 Gene3D G3DSA:2.10.10.20 580 638 1.2E-8 T 29-03-2018 CVS42_RS16670 979f92265bec0c84ab503d04129e1da2 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 8.0E-34 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CVS42_RS16670 979f92265bec0c84ab503d04129e1da2 98 SUPERFAMILY SSF75471 1 95 2.62E-29 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CVS42_RS16670 979f92265bec0c84ab503d04129e1da2 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 3.5E-20 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CVS42_RS16670 979f92265bec0c84ab503d04129e1da2 98 Gene3D G3DSA:3.30.110.60 2 97 1.2E-26 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CVS42_RS16670 979f92265bec0c84ab503d04129e1da2 98 SMART SM01103 3 86 4.3E-38 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CVS42_RS16670 979f92265bec0c84ab503d04129e1da2 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 7.3E-33 T 29-03-2018 IPR017924 RNA-binding protein YhbY GO:0003723 CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 413 28.344 T 29-03-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 Gene3D G3DSA:3.30.1480.10 1 131 6.7E-44 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 SMART SM00316 136 203 1.9E-7 T 29-03-2018 IPR022967 RNA-binding domain, S1 CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 444 492 1.8E-17 T 29-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 368 417 2.2E-18 T 29-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 SUPERFAMILY SSF47794 432 495 2.35E-16 T 29-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 Gene3D G3DSA:1.10.150.20 431 500 2.5E-15 T 29-03-2018 CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 Gene3D G3DSA:1.10.150.20 355 424 1.4E-12 T 29-03-2018 CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 SUPERFAMILY SSF50249 134 202 6.57E-17 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 Pfam PF14520 Helix-hairpin-helix domain 435 489 1.7E-9 T 29-03-2018 CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 SUPERFAMILY SSF47794 358 419 4.24E-16 T 29-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 SUPERFAMILY SSF69705 1 129 2.62E-39 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 Gene3D G3DSA:2.40.50.140 132 201 3.6E-12 T 29-03-2018 CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 Pfam PF08529 NusA N-terminal domain 4 126 3.5E-35 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 Gene3D G3DSA:3.30.300.20 202 279 5.4E-31 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 Gene3D G3DSA:3.30.300.20 281 351 2.2E-13 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 SUPERFAMILY SSF54814 282 346 2.53E-15 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 SUPERFAMILY SSF54814 204 281 1.18E-27 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 Pfam PF13184 NusA-like KH domain 233 300 6.1E-25 T 29-03-2018 IPR025249 KH domain, NusA-like GO:0003723 CVS42_RS16620 50ddc6fd36ff514ee66f1143bf02eb2a 500 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 345 8.9E-124 T 29-03-2018 IPR010213 Transcription termination factor NusA GO:0003723 CVS42_RS20210 134bdaae4d32496d4b408fe9bdb7e681 195 Pfam PF01909 Nucleotidyltransferase domain 35 62 2.7E-4 T 29-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CVS42_RS20210 134bdaae4d32496d4b408fe9bdb7e681 195 Gene3D G3DSA:3.30.460.10 19 149 5.1E-10 T 29-03-2018 CVS42_RS20210 134bdaae4d32496d4b408fe9bdb7e681 195 SUPERFAMILY SSF81301 16 129 2.34E-6 T 29-03-2018 CVS42_RS07435 c3b62fc76577c7b5b96e7a1d3069606f 173 SUPERFAMILY SSF52096 15 154 8.85E-18 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS07435 c3b62fc76577c7b5b96e7a1d3069606f 173 Gene3D G3DSA:3.90.226.10 2 158 1.9E-10 T 29-03-2018 CVS42_RS07435 c3b62fc76577c7b5b96e7a1d3069606f 173 PRINTS PR00127 Clp protease catalytic subunit P signature 20 40 8.9E-7 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CVS42_RS07435 c3b62fc76577c7b5b96e7a1d3069606f 173 PRINTS PR00127 Clp protease catalytic subunit P signature 70 89 8.9E-7 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CVS42_RS07435 c3b62fc76577c7b5b96e7a1d3069606f 173 PRINTS PR00127 Clp protease catalytic subunit P signature 134 153 8.9E-7 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CVS42_RS07435 c3b62fc76577c7b5b96e7a1d3069606f 173 Pfam PF00574 Clp protease 17 154 4.3E-14 T 29-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CVS42_RS19045 639df89fa54c446c8d79f38a5b21fb23 125 PRINTS PR00956 Flagellar motor switch protein FliN signature 45 61 3.9E-22 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CVS42_RS19045 639df89fa54c446c8d79f38a5b21fb23 125 PRINTS PR00956 Flagellar motor switch protein FliN signature 78 91 3.9E-22 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CVS42_RS19045 639df89fa54c446c8d79f38a5b21fb23 125 PRINTS PR00956 Flagellar motor switch protein FliN signature 62 78 3.9E-22 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CVS42_RS19045 639df89fa54c446c8d79f38a5b21fb23 125 PRINTS PR00956 Flagellar motor switch protein FliN signature 91 106 3.9E-22 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CVS42_RS19045 639df89fa54c446c8d79f38a5b21fb23 125 SUPERFAMILY SSF101801 43 118 4.45E-22 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CVS42_RS19045 639df89fa54c446c8d79f38a5b21fb23 125 Gene3D G3DSA:2.30.330.10 36 118 2.9E-26 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CVS42_RS19045 639df89fa54c446c8d79f38a5b21fb23 125 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 43 117 4.5E-29 T 29-03-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CVS42_RS19045 639df89fa54c446c8d79f38a5b21fb23 125 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 47 116 1.4E-23 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CVS42_RS00610 621a9247aa157afef11ed11c84be390f 466 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 2.6E-89 T 29-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS00610 621a9247aa157afef11ed11c84be390f 466 Hamap MF_01646 Siroheme synthase [cysG]. 1 458 52.598 T 29-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS00610 621a9247aa157afef11ed11c84be390f 466 Gene3D G3DSA:3.40.1010.10 215 341 2.1E-36 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CVS42_RS00610 621a9247aa157afef11ed11c84be390f 466 Gene3D G3DSA:1.10.8.210 151 209 2.3E-17 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS00610 621a9247aa157afef11ed11c84be390f 466 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS00610 621a9247aa157afef11ed11c84be390f 466 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 204 5.9E-72 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS00610 621a9247aa157afef11ed11c84be390f 466 Pfam PF13241 Putative NAD(P)-binding 6 115 1.9E-27 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS00610 621a9247aa157afef11ed11c84be390f 466 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 4.2E-9 T 29-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS00610 621a9247aa157afef11ed11c84be390f 466 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 1.2E-17 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS00610 621a9247aa157afef11ed11c84be390f 466 SUPERFAMILY SSF75615 114 207 1.7E-27 T 29-03-2018 CVS42_RS00610 621a9247aa157afef11ed11c84be390f 466 PIRSF PIRSF036426 1 465 3.4E-201 T 29-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS00610 621a9247aa157afef11ed11c84be390f 466 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 4.1E-49 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CVS42_RS00610 621a9247aa157afef11ed11c84be390f 466 SUPERFAMILY SSF51735 1 112 1.88E-27 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS00610 621a9247aa157afef11ed11c84be390f 466 SUPERFAMILY SSF53790 214 455 4.71E-80 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CVS42_RS00610 621a9247aa157afef11ed11c84be390f 466 Gene3D G3DSA:3.30.160.110 121 148 3.4E-17 T 29-03-2018 CVS42_RS00610 621a9247aa157afef11ed11c84be390f 466 Gene3D G3DSA:3.40.50.720 3 120 1.1E-21 T 29-03-2018 CVS42_RS00610 621a9247aa157afef11ed11c84be390f 466 Gene3D G3DSA:3.30.950.10 342 460 2.3E-41 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CVS42_RS18500 ce03cd52b44046746396155837737fae 508 PIRSF PIRSF028991 1 507 1.9E-245 T 29-03-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted CVS42_RS18500 ce03cd52b44046746396155837737fae 508 Gene3D G3DSA:3.20.70.20 175 492 4.1E-32 T 29-03-2018 CVS42_RS18500 ce03cd52b44046746396155837737fae 508 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 6 497 2.2E-232 T 29-03-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted CVS42_RS18500 ce03cd52b44046746396155837737fae 508 SUPERFAMILY SSF51998 20 460 2.14E-85 T 29-03-2018 CVS42_RS18500 ce03cd52b44046746396155837737fae 508 Pfam PF11230 Protein of unknown function (DUF3029) 16 497 4.5E-218 T 29-03-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted CVS42_RS06990 124021be57c70bbbc86870fb588bd456 399 Gene3D G3DSA:2.60.120.10 304 399 9.4E-16 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS06990 124021be57c70bbbc86870fb588bd456 399 Pfam PF01238 Phosphomannose isomerase type I 12 364 3.9E-78 T 29-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CVS42_RS06990 124021be57c70bbbc86870fb588bd456 399 PIRSF PIRSF001480 7 398 2.5E-99 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CVS42_RS06990 124021be57c70bbbc86870fb588bd456 399 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 11 389 1.6E-89 T 29-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CVS42_RS06990 124021be57c70bbbc86870fb588bd456 399 Gene3D G3DSA:2.60.120.10 13 167 3.4E-48 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS06990 124021be57c70bbbc86870fb588bd456 399 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 133 141 - T 29-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CVS42_RS06990 124021be57c70bbbc86870fb588bd456 399 SUPERFAMILY SSF51182 7 381 6.3E-100 T 29-03-2018 IPR011051 RmlC-like cupin domain CVS42_RS06990 124021be57c70bbbc86870fb588bd456 399 PRINTS PR00714 Phosphomannose isomerase type I signature 246 265 1.7E-66 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CVS42_RS06990 124021be57c70bbbc86870fb588bd456 399 PRINTS PR00714 Phosphomannose isomerase type I signature 133 156 1.7E-66 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CVS42_RS06990 124021be57c70bbbc86870fb588bd456 399 PRINTS PR00714 Phosphomannose isomerase type I signature 40 55 1.7E-66 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CVS42_RS06990 124021be57c70bbbc86870fb588bd456 399 PRINTS PR00714 Phosphomannose isomerase type I signature 265 284 1.7E-66 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CVS42_RS06990 124021be57c70bbbc86870fb588bd456 399 PRINTS PR00714 Phosphomannose isomerase type I signature 230 245 1.7E-66 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CVS42_RS06990 124021be57c70bbbc86870fb588bd456 399 PRINTS PR00714 Phosphomannose isomerase type I signature 284 303 1.7E-66 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CVS42_RS06990 124021be57c70bbbc86870fb588bd456 399 PRINTS PR00714 Phosphomannose isomerase type I signature 88 109 1.7E-66 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CVS42_RS06990 124021be57c70bbbc86870fb588bd456 399 PRINTS PR00714 Phosphomannose isomerase type I signature 12 30 1.7E-66 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CVS42_RS06990 124021be57c70bbbc86870fb588bd456 399 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 265 290 - T 29-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CVS42_RS06990 124021be57c70bbbc86870fb588bd456 399 Gene3D G3DSA:1.10.441.10 168 272 6.4E-28 T 29-03-2018 CVS42_RS19470 04ae3ef1410400f2cc42b32e5417c743 513 Pfam PF00665 Integrase core domain 139 269 5.7E-20 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CVS42_RS19470 04ae3ef1410400f2cc42b32e5417c743 513 Gene3D G3DSA:3.30.420.10 128 358 2.7E-21 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS19470 04ae3ef1410400f2cc42b32e5417c743 513 SUPERFAMILY SSF53098 142 303 1.29E-8 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS11210 04ae3ef1410400f2cc42b32e5417c743 513 Pfam PF00665 Integrase core domain 139 269 5.7E-20 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CVS42_RS11210 04ae3ef1410400f2cc42b32e5417c743 513 Gene3D G3DSA:3.30.420.10 128 358 2.7E-21 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS11210 04ae3ef1410400f2cc42b32e5417c743 513 SUPERFAMILY SSF53098 142 303 1.29E-8 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS11070 04ae3ef1410400f2cc42b32e5417c743 513 Pfam PF00665 Integrase core domain 139 269 5.7E-20 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CVS42_RS11070 04ae3ef1410400f2cc42b32e5417c743 513 Gene3D G3DSA:3.30.420.10 128 358 2.7E-21 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS11070 04ae3ef1410400f2cc42b32e5417c743 513 SUPERFAMILY SSF53098 142 303 1.29E-8 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS12225 1c1cd2fe9e608fb2e433dde9b31ac388 1485 SUPERFAMILY SSF51395 435 1189 8.96E-259 T 29-03-2018 CVS42_RS12225 1c1cd2fe9e608fb2e433dde9b31ac388 1485 Pfam PF01645 Conserved region in glutamate synthase 792 1155 4.7E-156 T 29-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CVS42_RS12225 1c1cd2fe9e608fb2e433dde9b31ac388 1485 Gene3D G3DSA:3.20.20.70 436 776 5.3E-85 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS12225 1c1cd2fe9e608fb2e433dde9b31ac388 1485 Pfam PF04898 Glutamate synthase central domain 457 735 2.0E-104 T 29-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 CVS42_RS12225 1c1cd2fe9e608fb2e433dde9b31ac388 1485 Gene3D G3DSA:3.60.20.10 13 435 1.3E-140 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS12225 1c1cd2fe9e608fb2e433dde9b31ac388 1485 Pfam PF01493 GXGXG motif 1234 1418 1.8E-76 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CVS42_RS12225 1c1cd2fe9e608fb2e433dde9b31ac388 1485 Gene3D G3DSA:3.20.20.70 777 1208 1.1E-146 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS12225 1c1cd2fe9e608fb2e433dde9b31ac388 1485 SUPERFAMILY SSF69336 1212 1464 7.98E-89 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CVS42_RS12225 1c1cd2fe9e608fb2e433dde9b31ac388 1485 SUPERFAMILY SSF56235 13 428 6.43E-148 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS12225 1c1cd2fe9e608fb2e433dde9b31ac388 1485 Gene3D G3DSA:2.160.20.60 1210 1481 7.4E-95 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CVS42_RS12225 1c1cd2fe9e608fb2e433dde9b31ac388 1485 Pfam PF00310 Glutamine amidotransferases class-II 13 425 1.6E-170 T 29-03-2018 IPR017932 Glutamine amidotransferase type 2 domain CVS42_RS16275 0ac30a61f4af67a5df6a951fbc8df967 262 PIRSF PIRSF009437 1 260 2.1E-95 T 29-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 CVS42_RS16275 0ac30a61f4af67a5df6a951fbc8df967 262 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 262 35.192 T 29-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 CVS42_RS16275 0ac30a61f4af67a5df6a951fbc8df967 262 Pfam PF04205 FMN-binding domain 147 241 4.5E-15 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CVS42_RS16275 0ac30a61f4af67a5df6a951fbc8df967 262 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 253 2.0E-85 T 29-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 CVS42_RS16275 0ac30a61f4af67a5df6a951fbc8df967 262 SMART SM00900 147 245 1.0E-29 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CVS42_RS18605 f0db50cf7ccd1e4375f014a83b4e7d27 333 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 21 328 1.8E-143 T 29-03-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CVS42_RS18605 f0db50cf7ccd1e4375f014a83b4e7d27 333 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 147 155 - T 29-03-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 CVS42_RS18605 f0db50cf7ccd1e4375f014a83b4e7d27 333 SUPERFAMILY SSF53850 23 330 6.47E-88 T 29-03-2018 CVS42_RS18605 f0db50cf7ccd1e4375f014a83b4e7d27 333 Gene3D G3DSA:3.40.190.10 130 331 5.3E-47 T 29-03-2018 CVS42_RS18605 f0db50cf7ccd1e4375f014a83b4e7d27 333 Gene3D G3DSA:3.40.190.10 22 129 2.2E-25 T 29-03-2018 CVS42_RS18605 f0db50cf7ccd1e4375f014a83b4e7d27 333 Pfam PF13531 Bacterial extracellular solute-binding protein 43 282 8.6E-44 T 29-03-2018 CVS42_RS18605 f0db50cf7ccd1e4375f014a83b4e7d27 333 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 50 62 - T 29-03-2018 IPR000957 Sulphate/thiosulphate-binding, conserved site CVS42_RS21735 22ce4207d284ea75b5f340ddc3d0aea8 471 SMART SM00388 270 328 6.3E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS21735 22ce4207d284ea75b5f340ddc3d0aea8 471 SUPERFAMILY SSF55874 328 470 1.23E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS21735 22ce4207d284ea75b5f340ddc3d0aea8 471 SMART SM00304 217 269 4.5E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS21735 22ce4207d284ea75b5f340ddc3d0aea8 471 SMART SM00387 367 471 4.6E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS21735 22ce4207d284ea75b5f340ddc3d0aea8 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 469 1.2E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS21735 22ce4207d284ea75b5f340ddc3d0aea8 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 1.2E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS21735 22ce4207d284ea75b5f340ddc3d0aea8 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 1.2E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS21735 22ce4207d284ea75b5f340ddc3d0aea8 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 1.2E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS21735 22ce4207d284ea75b5f340ddc3d0aea8 471 Gene3D G3DSA:3.30.565.10 343 471 1.4E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS21735 22ce4207d284ea75b5f340ddc3d0aea8 471 Gene3D G3DSA:1.10.287.130 260 342 1.5E-7 T 29-03-2018 CVS42_RS21735 22ce4207d284ea75b5f340ddc3d0aea8 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 271 327 1.9E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS21735 22ce4207d284ea75b5f340ddc3d0aea8 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 470 9.9E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS21735 22ce4207d284ea75b5f340ddc3d0aea8 471 SUPERFAMILY SSF47384 254 316 1.18E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS21735 22ce4207d284ea75b5f340ddc3d0aea8 471 Pfam PF00672 HAMP domain 217 266 2.6E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS11830 e65225929859e4641cb575b423237bb3 193 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 33.131 T 29-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CVS42_RS11830 e65225929859e4641cb575b423237bb3 193 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 29-03-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CVS42_RS11830 e65225929859e4641cb575b423237bb3 193 SUPERFAMILY SSF52540 1 141 1.35E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11830 e65225929859e4641cb575b423237bb3 193 PIRSF PIRSF035805 1 193 6.9E-55 T 29-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CVS42_RS11830 e65225929859e4641cb575b423237bb3 193 SUPERFAMILY SSF57716 142 189 3.52E-16 T 29-03-2018 CVS42_RS11830 e65225929859e4641cb575b423237bb3 193 Gene3D G3DSA:3.40.50.300 2 141 8.2E-40 T 29-03-2018 CVS42_RS11830 e65225929859e4641cb575b423237bb3 193 Pfam PF00265 Thymidine kinase 3 186 1.9E-50 T 29-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CVS42_RS11830 e65225929859e4641cb575b423237bb3 193 Gene3D G3DSA:3.30.60.20 142 193 7.9E-18 T 29-03-2018 CVS42_RS01915 45e073c61d7ee3d6ae9b99e7a59fff07 315 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 8.2E-151 T 29-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CVS42_RS01915 45e073c61d7ee3d6ae9b99e7a59fff07 315 PIRSF PIRSF000450 1 309 1.7E-144 T 29-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CVS42_RS01915 45e073c61d7ee3d6ae9b99e7a59fff07 315 Pfam PF04204 Homoserine O-succinyltransferase 2 299 2.8E-134 T 29-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CVS42_RS01915 45e073c61d7ee3d6ae9b99e7a59fff07 315 Gene3D G3DSA:3.40.50.880 34 301 5.9E-45 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS01915 45e073c61d7ee3d6ae9b99e7a59fff07 315 SUPERFAMILY SSF52317 17 297 9.16E-102 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS01915 45e073c61d7ee3d6ae9b99e7a59fff07 315 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 3.0E-103 T 29-03-2018 CVS42_RS01915 45e073c61d7ee3d6ae9b99e7a59fff07 315 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 52.09 T 29-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CVS42_RS15910 bfa33efd868338036d0a8dbe518aac76 175 Hamap MF_00746 Protein SprT [sprT]. 10 169 37.272 T 29-03-2018 IPR023483 Uncharacterised protein family SprT CVS42_RS15910 bfa33efd868338036d0a8dbe518aac76 175 Pfam PF17283 SprT-like zinc ribbon domain 130 166 1.9E-9 T 29-03-2018 IPR035240 SprT-like, zinc ribbon domain CVS42_RS15910 bfa33efd868338036d0a8dbe518aac76 175 Pfam PF10263 SprT-like family 17 122 3.7E-16 T 29-03-2018 IPR006640 SprT-like CVS42_RS15910 bfa33efd868338036d0a8dbe518aac76 175 SMART SM00731 14 169 1.3E-40 T 29-03-2018 IPR006640 SprT-like CVS42_RS15020 420f101867aa85577addf5ebfae61e54 373 Gene3D G3DSA:3.40.47.10 218 373 8.7E-24 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS15020 420f101867aa85577addf5ebfae61e54 373 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 147 163 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site CVS42_RS15020 420f101867aa85577addf5ebfae61e54 373 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 282 371 1.9E-21 T 29-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CVS42_RS15020 420f101867aa85577addf5ebfae61e54 373 Gene3D G3DSA:3.40.47.10 1 215 1.5E-37 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS15020 420f101867aa85577addf5ebfae61e54 373 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 150 215 5.6E-19 T 29-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CVS42_RS15020 420f101867aa85577addf5ebfae61e54 373 SUPERFAMILY SSF53901 3 372 4.14E-53 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS10685 64d79348acdbd8a426181b81e05a87ee 567 Pfam PF00374 Nickel-dependent hydrogenase 39 552 4.5E-208 T 29-03-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CVS42_RS10685 64d79348acdbd8a426181b81e05a87ee 567 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 29-03-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CVS42_RS10685 64d79348acdbd8a426181b81e05a87ee 567 SUPERFAMILY SSF56762 1 552 2.62E-167 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10685 64d79348acdbd8a426181b81e05a87ee 567 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 543 552 - T 29-03-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CVS42_RS10685 64d79348acdbd8a426181b81e05a87ee 567 Gene3D G3DSA:1.10.645.10 1 552 3.6E-180 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS03235 cb124ab6d6e46b266bfc39f4166ed7f7 456 SUPERFAMILY SSF53244 312 448 8.24E-40 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CVS42_RS03235 cb124ab6d6e46b266bfc39f4166ed7f7 456 Gene3D G3DSA:3.40.1190.10 91 314 1.0E-37 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS03235 cb124ab6d6e46b266bfc39f4166ed7f7 456 SUPERFAMILY SSF51984 1 90 5.76E-25 T 29-03-2018 CVS42_RS03235 cb124ab6d6e46b266bfc39f4166ed7f7 456 Gene3D G3DSA:3.40.50.720 1 90 6.8E-12 T 29-03-2018 CVS42_RS03235 cb124ab6d6e46b266bfc39f4166ed7f7 456 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 450 1.6E-233 T 29-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 CVS42_RS03235 cb124ab6d6e46b266bfc39f4166ed7f7 456 Pfam PF08245 Mur ligase middle domain 108 292 1.1E-20 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS03235 cb124ab6d6e46b266bfc39f4166ed7f7 456 SUPERFAMILY SSF53623 94 310 2.09E-49 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS03235 cb124ab6d6e46b266bfc39f4166ed7f7 456 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.892 T 29-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 CVS42_RS03235 cb124ab6d6e46b266bfc39f4166ed7f7 456 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 360 2.3E-8 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CVS42_RS03235 cb124ab6d6e46b266bfc39f4166ed7f7 456 Gene3D G3DSA:3.90.190.20 315 455 1.4E-27 T 29-03-2018 CVS42_RS03235 cb124ab6d6e46b266bfc39f4166ed7f7 456 Pfam PF01225 Mur ligase family, catalytic domain 2 99 3.0E-19 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CVS42_RS20640 005ec1247a74addaed94e03086af8820 121 SUPERFAMILY SSF54736 50 121 5.76E-25 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CVS42_RS20640 005ec1247a74addaed94e03086af8820 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 1.0E-18 T 29-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS20640 005ec1247a74addaed94e03086af8820 121 Gene3D G3DSA:3.30.1390.10 51 121 1.3E-30 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CVS42_RS20640 005ec1247a74addaed94e03086af8820 121 Gene3D G3DSA:1.20.5.710 2 50 1.0E-16 T 29-03-2018 CVS42_RS20640 005ec1247a74addaed94e03086af8820 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 48 2.6E-15 T 29-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS20640 005ec1247a74addaed94e03086af8820 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.822 T 29-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS20640 005ec1247a74addaed94e03086af8820 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 6.6E-31 T 29-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS20640 005ec1247a74addaed94e03086af8820 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 2.6E-47 T 29-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS20640 005ec1247a74addaed94e03086af8820 121 SUPERFAMILY SSF48300 3 57 1.02E-16 T 29-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS05640 08e19f31a02aa3dc60a0899ea01e75b6 422 Gene3D G3DSA:1.25.40.10 149 215 7.6E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS05640 08e19f31a02aa3dc60a0899ea01e75b6 422 Gene3D G3DSA:1.25.40.10 216 286 8.2E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS05640 08e19f31a02aa3dc60a0899ea01e75b6 422 Pfam PF14559 Tetratricopeptide repeat 174 238 1.1E-6 T 29-03-2018 CVS42_RS05640 08e19f31a02aa3dc60a0899ea01e75b6 422 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 113 2.5E-25 T 29-03-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI CVS42_RS05640 08e19f31a02aa3dc60a0899ea01e75b6 422 SUPERFAMILY SSF48452 152 258 4.14E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS12870 02dd3f1f9f7b7b37d96b6820be85203f 282 Pfam PF01904 Protein of unknown function DUF72 24 259 4.9E-58 T 29-03-2018 IPR002763 Protein of unknown function DUF72 CVS42_RS12870 02dd3f1f9f7b7b37d96b6820be85203f 282 SUPERFAMILY SSF117396 1 262 6.28E-72 T 29-03-2018 IPR002763 Protein of unknown function DUF72 CVS42_RS12870 02dd3f1f9f7b7b37d96b6820be85203f 282 Gene3D G3DSA:3.20.20.410 1 265 5.9E-70 T 29-03-2018 IPR002763 Protein of unknown function DUF72 CVS42_RS03320 10cd3b5a2090b6565ad0a7fadca12b4c 142 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 124 6.1E-12 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CVS42_RS03320 10cd3b5a2090b6565ad0a7fadca12b4c 142 SUPERFAMILY SSF54593 12 130 1.48E-22 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS03320 10cd3b5a2090b6565ad0a7fadca12b4c 142 Gene3D G3DSA:3.10.180.10 5 141 7.7E-20 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS09280 507d179f167ded0d5ee64794b408820f 310 SUPERFAMILY SSF53633 3 308 1.96E-78 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS09280 507d179f167ded0d5ee64794b408820f 310 TIGRFAM TIGR00746 arcC: carbamate kinase 4 309 1.5E-110 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CVS42_RS09280 507d179f167ded0d5ee64794b408820f 310 Pfam PF00696 Amino acid kinase family 3 282 7.8E-30 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS09280 507d179f167ded0d5ee64794b408820f 310 Gene3D G3DSA:3.40.1160.10 1 310 6.9E-57 T 29-03-2018 CVS42_RS09280 507d179f167ded0d5ee64794b408820f 310 PRINTS PR01469 Bacterial carbamate kinase signature 156 175 2.6E-63 T 29-03-2018 CVS42_RS09280 507d179f167ded0d5ee64794b408820f 310 PRINTS PR01469 Bacterial carbamate kinase signature 108 127 2.6E-63 T 29-03-2018 CVS42_RS09280 507d179f167ded0d5ee64794b408820f 310 PRINTS PR01469 Bacterial carbamate kinase signature 179 197 2.6E-63 T 29-03-2018 CVS42_RS09280 507d179f167ded0d5ee64794b408820f 310 PRINTS PR01469 Bacterial carbamate kinase signature 73 91 2.6E-63 T 29-03-2018 CVS42_RS09280 507d179f167ded0d5ee64794b408820f 310 PRINTS PR01469 Bacterial carbamate kinase signature 209 224 2.6E-63 T 29-03-2018 CVS42_RS09280 507d179f167ded0d5ee64794b408820f 310 PRINTS PR01469 Bacterial carbamate kinase signature 264 279 2.6E-63 T 29-03-2018 CVS42_RS09280 507d179f167ded0d5ee64794b408820f 310 PRINTS PR01469 Bacterial carbamate kinase signature 39 58 2.6E-63 T 29-03-2018 CVS42_RS09280 507d179f167ded0d5ee64794b408820f 310 PIRSF PIRSF000723 1 310 5.3E-118 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CVS42_RS16605 33fc6d0234ae4e0282221f33f4ab92b9 316 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 253 310 8.1E-20 T 29-03-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS16605 33fc6d0234ae4e0282221f33f4ab92b9 316 Gene3D G3DSA:3.30.2350.10 11 229 9.5E-83 T 29-03-2018 CVS42_RS16605 33fc6d0234ae4e0282221f33f4ab92b9 316 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 182 249 4.9E-24 T 29-03-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 CVS42_RS16605 33fc6d0234ae4e0282221f33f4ab92b9 316 SUPERFAMILY SSF55120 12 249 1.41E-84 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS16605 33fc6d0234ae4e0282221f33f4ab92b9 316 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 13 220 5.2E-88 T 29-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS16605 33fc6d0234ae4e0282221f33f4ab92b9 316 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 34 181 8.6E-58 T 29-03-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CVS42_RS16605 33fc6d0234ae4e0282221f33f4ab92b9 316 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 12 310 19.452 T 29-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS16605 33fc6d0234ae4e0282221f33f4ab92b9 316 SUPERFAMILY SSF88697 252 312 6.46E-14 T 29-03-2018 IPR015947 PUA-like domain CVS42_RS16605 33fc6d0234ae4e0282221f33f4ab92b9 316 Gene3D G3DSA:2.30.130.10 251 314 4.0E-16 T 29-03-2018 IPR002478 PUA domain GO:0003723 CVS42_RS08650 375d1c0dec0b7674ada19a12f4ffb17f 380 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 12 376 1.2E-172 T 29-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CVS42_RS08650 375d1c0dec0b7674ada19a12f4ffb17f 380 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 14 371 4.2E-150 T 29-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CVS42_RS08650 375d1c0dec0b7674ada19a12f4ffb17f 380 PIRSF PIRSF000524 8 376 2.2E-58 T 29-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 CVS42_RS08650 375d1c0dec0b7674ada19a12f4ffb17f 380 Gene3D G3DSA:3.90.1150.10 266 376 1.1E-31 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS08650 375d1c0dec0b7674ada19a12f4ffb17f 380 SUPERFAMILY SSF53383 13 372 8.11E-82 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS08650 375d1c0dec0b7674ada19a12f4ffb17f 380 Pfam PF00266 Aminotransferase class-V 65 320 1.4E-25 T 29-03-2018 IPR000192 Aminotransferase class V domain CVS42_RS08650 375d1c0dec0b7674ada19a12f4ffb17f 380 Gene3D G3DSA:3.40.640.10 24 265 3.6E-38 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS08650 375d1c0dec0b7674ada19a12f4ffb17f 380 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 380 195.286 T 29-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CVS42_RS13480 e81ca7e0dedc9b84d0b01410e4f161c3 437 Gene3D G3DSA:3.20.20.60 1 419 2.2E-150 T 29-03-2018 CVS42_RS13480 e81ca7e0dedc9b84d0b01410e4f161c3 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 1.5E-88 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CVS42_RS13480 e81ca7e0dedc9b84d0b01410e4f161c3 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 257 1.3E-112 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CVS42_RS13480 e81ca7e0dedc9b84d0b01410e4f161c3 437 Pfam PF00463 Isocitrate lyase family 11 257 4.1E-61 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CVS42_RS13480 e81ca7e0dedc9b84d0b01410e4f161c3 437 Pfam PF00463 Isocitrate lyase family 258 436 5.0E-50 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CVS42_RS13480 e81ca7e0dedc9b84d0b01410e4f161c3 437 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 29-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 CVS42_RS13480 e81ca7e0dedc9b84d0b01410e4f161c3 437 SUPERFAMILY SSF51621 7 436 8.97E-153 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CVS42_RS13480 e81ca7e0dedc9b84d0b01410e4f161c3 437 PIRSF PIRSF001362 1 437 6.6E-225 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CVS42_RS12820 ea150ecc6db6a2b5f1cc9a30a93b4ca7 331 SMART SM00382 46 239 1.3E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS12820 ea150ecc6db6a2b5f1cc9a30a93b4ca7 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 308 2.3E-19 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CVS42_RS12820 ea150ecc6db6a2b5f1cc9a30a93b4ca7 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 5.1E-27 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CVS42_RS12820 ea150ecc6db6a2b5f1cc9a30a93b4ca7 331 SUPERFAMILY SSF52540 8 261 4.85E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS12820 ea150ecc6db6a2b5f1cc9a30a93b4ca7 331 Pfam PF00005 ABC transporter 38 189 6.9E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS12820 ea150ecc6db6a2b5f1cc9a30a93b4ca7 331 Gene3D G3DSA:3.40.50.300 5 328 1.3E-79 T 29-03-2018 CVS42_RS12820 ea150ecc6db6a2b5f1cc9a30a93b4ca7 331 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS19040 46e12666563e47bf1da35681e154e5d6 244 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 217 229 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS19040 46e12666563e47bf1da35681e154e5d6 244 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 169 184 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS19040 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 100 112 4.6E-16 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CVS42_RS19040 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 140 152 4.6E-16 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CVS42_RS19040 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 230 240 4.6E-16 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CVS42_RS19040 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 112 126 4.6E-16 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CVS42_RS19040 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 162 174 4.6E-16 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CVS42_RS19040 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 40 49 4.6E-16 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CVS42_RS19040 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 61 81 9.3E-65 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS19040 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 42 61 9.3E-65 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS19040 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 81 100 9.3E-65 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS19040 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 214 239 9.3E-65 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS19040 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 169 189 9.3E-65 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS19040 46e12666563e47bf1da35681e154e5d6 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 190 211 9.3E-65 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS19040 46e12666563e47bf1da35681e154e5d6 244 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 44 240 1.9E-77 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CVS42_RS19040 46e12666563e47bf1da35681e154e5d6 244 Pfam PF00813 FliP family 45 236 1.7E-76 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS10900 748347f49cd5f00d08470ad7cd36fef2 656 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CVS42_RS10900 748347f49cd5f00d08470ad7cd36fef2 656 SUPERFAMILY SSF51230 568 645 7.85E-21 T 29-03-2018 IPR011053 Single hybrid motif CVS42_RS10900 748347f49cd5f00d08470ad7cd36fef2 656 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 158 172 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CVS42_RS10900 748347f49cd5f00d08470ad7cd36fef2 656 Pfam PF00364 Biotin-requiring enzyme 583 644 4.6E-17 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CVS42_RS10900 748347f49cd5f00d08470ad7cd36fef2 656 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 120 326 7.6E-68 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CVS42_RS10900 748347f49cd5f00d08470ad7cd36fef2 656 SUPERFAMILY SSF56059 120 331 1.47E-63 T 29-03-2018 CVS42_RS10900 748347f49cd5f00d08470ad7cd36fef2 656 SMART SM00878 340 443 2.9E-43 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CVS42_RS10900 748347f49cd5f00d08470ad7cd36fef2 656 Pfam PF00289 Biotin carboxylase, N-terminal domain 7 115 5.7E-44 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CVS42_RS10900 748347f49cd5f00d08470ad7cd36fef2 656 Pfam PF02785 Biotin carboxylase C-terminal domain 340 442 8.7E-28 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CVS42_RS10900 748347f49cd5f00d08470ad7cd36fef2 656 Gene3D G3DSA:3.40.50.20 6 128 1.7E-50 T 29-03-2018 CVS42_RS10900 748347f49cd5f00d08470ad7cd36fef2 656 Gene3D G3DSA:3.30.470.20 215 445 3.5E-93 T 29-03-2018 CVS42_RS10900 748347f49cd5f00d08470ad7cd36fef2 656 SUPERFAMILY SSF51246 335 442 5.76E-29 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CVS42_RS10900 748347f49cd5f00d08470ad7cd36fef2 656 SMART SM01209 119 297 0.0034 T 29-03-2018 CVS42_RS10900 748347f49cd5f00d08470ad7cd36fef2 656 Gene3D G3DSA:2.40.50.100 563 652 9.7E-19 T 29-03-2018 CVS42_RS10900 748347f49cd5f00d08470ad7cd36fef2 656 SUPERFAMILY SSF52440 3 118 3.02E-47 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CVS42_RS10900 748347f49cd5f00d08470ad7cd36fef2 656 Gene3D G3DSA:3.30.1490.20 129 214 4.6E-18 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CVS42_RS10900 748347f49cd5f00d08470ad7cd36fef2 656 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 602 619 - T 29-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CVS42_RS15330 a02b27f1e009b2b20c2c50827ede1e1c 116 Gene3D G3DSA:3.30.1420.10 9 44 9.0E-17 T 29-03-2018 CVS42_RS15330 a02b27f1e009b2b20c2c50827ede1e1c 116 PIRSF PIRSF006223 9 116 3.1E-44 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CVS42_RS15330 a02b27f1e009b2b20c2c50827ede1e1c 116 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 9 116 4.1E-48 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CVS42_RS15330 a02b27f1e009b2b20c2c50827ede1e1c 116 Pfam PF04358 DsrC like protein 10 116 3.0E-44 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CVS42_RS15330 a02b27f1e009b2b20c2c50827ede1e1c 116 Gene3D G3DSA:1.10.10.370 46 115 2.3E-31 T 29-03-2018 CVS42_RS15330 a02b27f1e009b2b20c2c50827ede1e1c 116 SUPERFAMILY SSF69721 6 116 2.22E-41 T 29-03-2018 IPR025526 DsrC-like domain CVS42_RS15245 98f800a0277a82a355e1b262476c2963 165 TIGRFAM TIGR00608 radc: DNA repair protein RadC 27 164 1.6E-41 T 29-03-2018 IPR001405 RadC protein CVS42_RS15245 98f800a0277a82a355e1b262476c2963 165 Gene3D G3DSA:3.40.140.10 40 165 1.5E-43 T 29-03-2018 CVS42_RS15245 98f800a0277a82a355e1b262476c2963 165 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 114 119 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CVS42_RS15245 98f800a0277a82a355e1b262476c2963 165 Pfam PF04002 RadC-like JAB domain 44 162 1.9E-40 T 29-03-2018 IPR025657 RadC-like JAB domain CVS42_RS10225 36fbe6f922d6fefd723bf7f5888f7eee 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 260 5.4E-16 T 29-03-2018 IPR000014 PAS domain CVS42_RS10225 36fbe6f922d6fefd723bf7f5888f7eee 431 SUPERFAMILY SSF55785 122 251 4.95E-18 T 29-03-2018 IPR000014 PAS domain CVS42_RS10225 36fbe6f922d6fefd723bf7f5888f7eee 431 Gene3D G3DSA:3.30.450.20 3 132 3.2E-15 T 29-03-2018 CVS42_RS10225 36fbe6f922d6fefd723bf7f5888f7eee 431 SUPERFAMILY SSF55785 28 132 8.76E-8 T 29-03-2018 IPR000014 PAS domain CVS42_RS10225 36fbe6f922d6fefd723bf7f5888f7eee 431 Gene3D G3DSA:3.30.450.20 133 256 1.3E-19 T 29-03-2018 CVS42_RS10225 36fbe6f922d6fefd723bf7f5888f7eee 431 Pfam PF13188 PAS domain 137 190 1.8E-7 T 29-03-2018 IPR000014 PAS domain CVS42_RS10225 36fbe6f922d6fefd723bf7f5888f7eee 431 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 260 423 2.1E-54 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS10225 36fbe6f922d6fefd723bf7f5888f7eee 431 SUPERFAMILY SSF55073 269 424 9.42E-49 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS10225 36fbe6f922d6fefd723bf7f5888f7eee 431 Pfam PF00990 Diguanylate cyclase, GGDEF domain 264 421 5.3E-48 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS10225 36fbe6f922d6fefd723bf7f5888f7eee 431 SMART SM00091 137 201 1.4E-4 T 29-03-2018 IPR000014 PAS domain CVS42_RS10225 36fbe6f922d6fefd723bf7f5888f7eee 431 SMART SM00091 12 78 190.0 T 29-03-2018 IPR000014 PAS domain CVS42_RS10225 36fbe6f922d6fefd723bf7f5888f7eee 431 Gene3D G3DSA:3.30.70.270 257 426 1.1E-54 T 29-03-2018 CVS42_RS10225 36fbe6f922d6fefd723bf7f5888f7eee 431 SMART SM00267 253 426 7.5E-63 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS10225 36fbe6f922d6fefd723bf7f5888f7eee 431 Pfam PF08448 PAS fold 14 126 2.1E-6 T 29-03-2018 IPR013656 PAS fold-4 CVS42_RS21830 4c3e65a26b263d14beffd19a79128a03 334 SUPERFAMILY SSF47413 1 59 4.29E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS21830 4c3e65a26b263d14beffd19a79128a03 334 SUPERFAMILY SSF53822 60 332 1.04E-92 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CVS42_RS21830 4c3e65a26b263d14beffd19a79128a03 334 SMART SM00354 1 71 3.3E-33 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS21830 4c3e65a26b263d14beffd19a79128a03 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 CVS42_RS21830 4c3e65a26b263d14beffd19a79128a03 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS21830 4c3e65a26b263d14beffd19a79128a03 334 Gene3D G3DSA:3.40.50.2300 177 313 6.8E-50 T 29-03-2018 CVS42_RS21830 4c3e65a26b263d14beffd19a79128a03 334 Pfam PF13377 Periplasmic binding protein-like domain 169 330 3.4E-41 T 29-03-2018 CVS42_RS21830 4c3e65a26b263d14beffd19a79128a03 334 Gene3D G3DSA:3.40.50.2300 56 176 1.0E-34 T 29-03-2018 CVS42_RS21830 4c3e65a26b263d14beffd19a79128a03 334 Gene3D G3DSA:1.10.260.40 2 55 1.8E-22 T 29-03-2018 CVS42_RS21830 4c3e65a26b263d14beffd19a79128a03 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.0E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS21830 4c3e65a26b263d14beffd19a79128a03 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.0E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS08195 ea339ee09239aba15c3b0703ce9e4e5e 132 SUPERFAMILY SSF54593 1 131 3.22E-24 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS08195 ea339ee09239aba15c3b0703ce9e4e5e 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 130 1.1E-10 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CVS42_RS08195 ea339ee09239aba15c3b0703ce9e4e5e 132 Gene3D G3DSA:3.10.180.10 1 132 1.5E-22 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS20075 4095467d16c22122781878e7534804d0 255 Gene3D G3DSA:3.20.20.70 1 254 1.4E-54 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS20075 4095467d16c22122781878e7534804d0 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 42.545 T 29-03-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CVS42_RS20075 4095467d16c22122781878e7534804d0 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 7.7E-107 T 29-03-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CVS42_RS20075 4095467d16c22122781878e7534804d0 255 SUPERFAMILY SSF110399 1 235 9.29E-85 T 29-03-2018 CVS42_RS08615 2a1c747b39ebac852febbe42ab002e29 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 4.2E-176 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CVS42_RS08615 2a1c747b39ebac852febbe42ab002e29 388 Gene3D G3DSA:3.30.1490.20 21 95 1.8E-25 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CVS42_RS08615 2a1c747b39ebac852febbe42ab002e29 388 Gene3D G3DSA:3.30.470.20 96 239 1.1E-52 T 29-03-2018 CVS42_RS08615 2a1c747b39ebac852febbe42ab002e29 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.853 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CVS42_RS08615 2a1c747b39ebac852febbe42ab002e29 388 Pfam PF08442 ATP-grasp domain 2 203 1.5E-81 T 29-03-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CVS42_RS08615 2a1c747b39ebac852febbe42ab002e29 388 Gene3D G3DSA:3.40.50.261 240 385 9.9E-42 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CVS42_RS08615 2a1c747b39ebac852febbe42ab002e29 388 PIRSF PIRSF001554 1 388 1.6E-153 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CVS42_RS08615 2a1c747b39ebac852febbe42ab002e29 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 29-03-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CVS42_RS08615 2a1c747b39ebac852febbe42ab002e29 388 SUPERFAMILY SSF52210 239 384 1.01E-52 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CVS42_RS08615 2a1c747b39ebac852febbe42ab002e29 388 SUPERFAMILY SSF56059 1 237 1.49E-82 T 29-03-2018 CVS42_RS08615 2a1c747b39ebac852febbe42ab002e29 388 Pfam PF00549 CoA-ligase 262 382 5.9E-24 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 Gene3D G3DSA:3.30.70.20 155 234 4.6E-4 T 29-03-2018 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 126 6.0E-15 T 29-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 603 620 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 660 4.7E-201 T 29-03-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 SUPERFAMILY SSF53706 219 690 5.76E-82 T 29-03-2018 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 Gene3D G3DSA:3.40.50.740 280 450 3.6E-12 T 29-03-2018 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 SUPERFAMILY SSF54292 1 77 1.62E-18 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 SUPERFAMILY SSF54862 81 213 3.68E-34 T 29-03-2018 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 29-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 29-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 SMART SM00929 88 128 1.2E-19 T 29-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 76 6.0E-12 T 29-03-2018 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 Pfam PF00384 Molybdopterin oxidoreductase 475 643 1.1E-13 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 Gene3D G3DSA:3.10.20.30 1 154 7.5E-9 T 29-03-2018 IPR012675 Beta-grasp domain CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 Gene3D G3DSA:2.40.40.20 834 911 3.1E-5 T 29-03-2018 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 Gene3D G3DSA:2.20.25.90 235 276 4.9E-10 T 29-03-2018 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 Gene3D G3DSA:3.40.50.740 451 692 1.5E-21 T 29-03-2018 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 SUPERFAMILY SSF50692 826 900 2.71E-8 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 29-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 6.1E-11 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12120 1b7955675483b858293f039e6a5eb97a 918 SMART SM00926 221 275 1.9E-10 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS11660 228ec869de830d0b9d1e5e8a42e76919 214 SUPERFAMILY SSF52540 1 211 1.41E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11660 228ec869de830d0b9d1e5e8a42e76919 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 8.6E-16 T 29-03-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CVS42_RS11660 228ec869de830d0b9d1e5e8a42e76919 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.692 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CVS42_RS11660 228ec869de830d0b9d1e5e8a42e76919 214 Pfam PF00406 Adenylate kinase 5 185 1.6E-57 T 29-03-2018 CVS42_RS11660 228ec869de830d0b9d1e5e8a42e76919 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 7.3E-74 T 29-03-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CVS42_RS11660 228ec869de830d0b9d1e5e8a42e76919 214 PRINTS PR00094 Adenylate kinase signature 32 46 3.8E-35 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CVS42_RS11660 228ec869de830d0b9d1e5e8a42e76919 214 PRINTS PR00094 Adenylate kinase signature 81 97 3.8E-35 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CVS42_RS11660 228ec869de830d0b9d1e5e8a42e76919 214 PRINTS PR00094 Adenylate kinase signature 4 17 3.8E-35 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CVS42_RS11660 228ec869de830d0b9d1e5e8a42e76919 214 PRINTS PR00094 Adenylate kinase signature 156 171 3.8E-35 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CVS42_RS11660 228ec869de830d0b9d1e5e8a42e76919 214 PRINTS PR00094 Adenylate kinase signature 173 187 3.8E-35 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CVS42_RS11660 228ec869de830d0b9d1e5e8a42e76919 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 29-03-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CVS42_RS11660 228ec869de830d0b9d1e5e8a42e76919 214 Gene3D G3DSA:3.40.50.300 1 214 2.3E-65 T 29-03-2018 CVS42_RS07680 5c5c1729116cebb7b67c0baa5680bf93 371 Gene3D G3DSA:3.20.20.120 18 197 1.1E-19 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CVS42_RS07680 5c5c1729116cebb7b67c0baa5680bf93 371 Pfam PF04551 GcpE protein 14 354 4.4E-133 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CVS42_RS07680 5c5c1729116cebb7b67c0baa5680bf93 371 PIRSF PIRSF004640 2 363 4.4E-146 T 29-03-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CVS42_RS07680 5c5c1729116cebb7b67c0baa5680bf93 371 SUPERFAMILY SSF56014 266 354 1.33E-12 T 29-03-2018 CVS42_RS07680 5c5c1729116cebb7b67c0baa5680bf93 371 SUPERFAMILY SSF51604 23 140 3.88E-10 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CVS42_RS07680 5c5c1729116cebb7b67c0baa5680bf93 371 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 10 350 2.0E-127 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CVS42_RS07680 5c5c1729116cebb7b67c0baa5680bf93 371 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 8 358 34.656 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CVS42_RS11715 03d8160845b9d25efccfeb47e5effd9c 415 SUPERFAMILY SSF52172 122 260 3.27E-28 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS11715 03d8160845b9d25efccfeb47e5effd9c 415 SMART SM00448 123 237 4.9E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS11715 03d8160845b9d25efccfeb47e5effd9c 415 SMART SM00448 3 111 4.3E-11 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS11715 03d8160845b9d25efccfeb47e5effd9c 415 SUPERFAMILY SSF55073 259 409 1.49E-39 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS11715 03d8160845b9d25efccfeb47e5effd9c 415 Pfam PF00072 Response regulator receiver domain 125 236 3.6E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS11715 03d8160845b9d25efccfeb47e5effd9c 415 Pfam PF00072 Response regulator receiver domain 5 104 6.9E-10 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS11715 03d8160845b9d25efccfeb47e5effd9c 415 Gene3D G3DSA:3.40.50.2300 1 116 6.5E-16 T 29-03-2018 CVS42_RS11715 03d8160845b9d25efccfeb47e5effd9c 415 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 406 7.5E-35 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS11715 03d8160845b9d25efccfeb47e5effd9c 415 SMART SM00267 243 411 2.9E-58 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS11715 03d8160845b9d25efccfeb47e5effd9c 415 Gene3D G3DSA:3.40.50.2300 117 250 1.9E-27 T 29-03-2018 CVS42_RS11715 03d8160845b9d25efccfeb47e5effd9c 415 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 251 410 1.5E-36 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS11715 03d8160845b9d25efccfeb47e5effd9c 415 Gene3D G3DSA:3.30.70.270 251 412 1.3E-44 T 29-03-2018 CVS42_RS11715 03d8160845b9d25efccfeb47e5effd9c 415 SUPERFAMILY SSF52172 2 107 2.13E-16 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS05000 f4a72b56904e483c13a709a3c57ca8a6 283 Pfam PF05175 Methyltransferase small domain 111 196 1.5E-11 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CVS42_RS05000 f4a72b56904e483c13a709a3c57ca8a6 283 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 276 4.1E-89 T 29-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CVS42_RS05000 f4a72b56904e483c13a709a3c57ca8a6 283 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 280 44.2 T 29-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CVS42_RS05000 f4a72b56904e483c13a709a3c57ca8a6 283 Gene3D G3DSA:1.10.8.10 1 79 2.5E-21 T 29-03-2018 CVS42_RS05000 f4a72b56904e483c13a709a3c57ca8a6 283 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 185 191 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CVS42_RS05000 f4a72b56904e483c13a709a3c57ca8a6 283 Gene3D G3DSA:3.40.50.150 80 279 4.6E-39 T 29-03-2018 CVS42_RS05000 f4a72b56904e483c13a709a3c57ca8a6 283 SUPERFAMILY SSF53335 4 277 3.46E-53 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS05000 f4a72b56904e483c13a709a3c57ca8a6 283 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 279 2.9E-73 T 29-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CVS42_RS15640 fb955f9cdf4d75227b146d35e5ff4a49 169 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CVS42_RS15640 fb955f9cdf4d75227b146d35e5ff4a49 169 Pfam PF13353 4Fe-4S single cluster domain 12 151 4.5E-51 T 29-03-2018 CVS42_RS15640 fb955f9cdf4d75227b146d35e5ff4a49 169 Gene3D G3DSA:3.20.20.70 12 130 6.1E-11 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS15640 fb955f9cdf4d75227b146d35e5ff4a49 169 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 3 153 1.1E-60 T 29-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 CVS42_RS15640 fb955f9cdf4d75227b146d35e5ff4a49 169 PIRSF PIRSF000368 1 162 3.0E-57 T 29-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 CVS42_RS15640 fb955f9cdf4d75227b146d35e5ff4a49 169 SUPERFAMILY SSF102114 12 122 1.44E-7 T 29-03-2018 CVS42_RS15080 f4d3c13cbe115e0fff0e2c977c07588b 333 Pfam PF03934 Type II secretion system (T2SS), protein K 36 322 1.1E-88 T 29-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 CVS42_RS15080 f4d3c13cbe115e0fff0e2c977c07588b 333 PIRSF PIRSF002786 7 333 2.9E-73 T 29-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 CVS42_RS15080 f4d3c13cbe115e0fff0e2c977c07588b 333 SUPERFAMILY SSF158544 225 276 1.83E-12 T 29-03-2018 CVS42_RS15080 f4d3c13cbe115e0fff0e2c977c07588b 333 Gene3D G3DSA:1.10.40.60 227 287 9.6E-13 T 29-03-2018 CVS42_RS15080 f4d3c13cbe115e0fff0e2c977c07588b 333 SUPERFAMILY SSF54523 291 327 1.27E-28 T 29-03-2018 CVS42_RS15080 f4d3c13cbe115e0fff0e2c977c07588b 333 SUPERFAMILY SSF54523 42 107 1.27E-28 T 29-03-2018 CVS42_RS15080 f4d3c13cbe115e0fff0e2c977c07588b 333 SUPERFAMILY SSF158544 108 223 6.28E-33 T 29-03-2018 CVS42_RS15080 f4d3c13cbe115e0fff0e2c977c07588b 333 Gene3D G3DSA:1.10.40.60 106 225 2.2E-34 T 29-03-2018 CVS42_RS17275 e6ace046d76993124aa293262ad7e672 621 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 29-03-2018 IPR014762 DNA mismatch repair, conserved site CVS42_RS17275 e6ace046d76993124aa293262ad7e672 621 Pfam PF08676 MutL C terminal dimerisation domain 438 571 1.9E-24 T 29-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CVS42_RS17275 e6ace046d76993124aa293262ad7e672 621 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 621 25.353 T 29-03-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 CVS42_RS17275 e6ace046d76993124aa293262ad7e672 621 SMART SM00853 439 580 2.7E-15 T 29-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CVS42_RS17275 e6ace046d76993124aa293262ad7e672 621 SMART SM01340 212 330 1.7E-58 T 29-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CVS42_RS17275 e6ace046d76993124aa293262ad7e672 621 Gene3D G3DSA:3.30.230.10 200 328 2.3E-29 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CVS42_RS17275 e6ace046d76993124aa293262ad7e672 621 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 2.4E-98 T 29-03-2018 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 CVS42_RS17275 e6ace046d76993124aa293262ad7e672 621 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 124 8.3E-13 T 29-03-2018 CVS42_RS17275 e6ace046d76993124aa293262ad7e672 621 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 1.6E-37 T 29-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CVS42_RS17275 e6ace046d76993124aa293262ad7e672 621 SUPERFAMILY SSF118116 437 592 7.85E-31 T 29-03-2018 CVS42_RS17275 e6ace046d76993124aa293262ad7e672 621 Gene3D G3DSA:3.30.565.10 11 199 1.3E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS17275 e6ace046d76993124aa293262ad7e672 621 SUPERFAMILY SSF55874 1 208 1.02E-54 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS17275 e6ace046d76993124aa293262ad7e672 621 SUPERFAMILY SSF54211 191 330 2.88E-37 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS01025 64f25d87386115989865e198e9f8a17e 254 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 9 253 2.9E-93 T 29-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 CVS42_RS01025 64f25d87386115989865e198e9f8a17e 254 Gene3D G3DSA:3.40.50.1820 1 254 5.0E-49 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS01025 64f25d87386115989865e198e9f8a17e 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 3.6E-11 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS01025 64f25d87386115989865e198e9f8a17e 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 37 52 3.6E-11 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS01025 64f25d87386115989865e198e9f8a17e 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 3.6E-11 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS01025 64f25d87386115989865e198e9f8a17e 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 78 91 3.6E-11 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS01025 64f25d87386115989865e198e9f8a17e 254 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 3 254 44.869 T 29-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 CVS42_RS01025 64f25d87386115989865e198e9f8a17e 254 Pfam PF00561 alpha/beta hydrolase fold 14 242 3.7E-24 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS01025 64f25d87386115989865e198e9f8a17e 254 SUPERFAMILY SSF53474 3 253 8.44E-56 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS21980 2337304c9f37f3da76ce37e89c5dbffc 546 Gene3D G3DSA:3.30.200.20 101 244 1.0E-20 T 29-03-2018 CVS42_RS21980 2337304c9f37f3da76ce37e89c5dbffc 546 Pfam PF03109 ABC1 family 113 230 7.8E-35 T 29-03-2018 IPR004147 UbiB domain CVS42_RS21980 2337304c9f37f3da76ce37e89c5dbffc 546 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 540 57.447 T 29-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 CVS42_RS21980 2337304c9f37f3da76ce37e89c5dbffc 546 SUPERFAMILY SSF56112 94 158 3.07E-46 T 29-03-2018 IPR011009 Protein kinase-like domain CVS42_RS21980 2337304c9f37f3da76ce37e89c5dbffc 546 SUPERFAMILY SSF56112 193 436 3.07E-46 T 29-03-2018 IPR011009 Protein kinase-like domain CVS42_RS21980 2337304c9f37f3da76ce37e89c5dbffc 546 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 1.9E-180 T 29-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 CVS42_RS13585 390ed95479d656f51c52ca1f2bb551cc 248 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 225 6.2E-55 T 29-03-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 CVS42_RS13585 390ed95479d656f51c52ca1f2bb551cc 248 Pfam PF00460 Flagella basal body rod protein 5 35 4.9E-8 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CVS42_RS13585 390ed95479d656f51c52ca1f2bb551cc 248 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 174 243 2.8E-21 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CVS42_RS13585 390ed95479d656f51c52ca1f2bb551cc 248 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 1.7E-34 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CVS42_RS13585 390ed95479d656f51c52ca1f2bb551cc 248 SUPERFAMILY SSF117143 77 206 3.01E-16 T 29-03-2018 CVS42_RS03050 7ec18c3ac63dcf18c34a193f94bbbbd0 545 SUPERFAMILY SSF58104 266 522 1.22E-66 T 29-03-2018 CVS42_RS03050 7ec18c3ac63dcf18c34a193f94bbbbd0 545 Gene3D G3DSA:3.40.50.10600 5 123 2.3E-29 T 29-03-2018 CVS42_RS03050 7ec18c3ac63dcf18c34a193f94bbbbd0 545 SMART SM00283 260 521 2.8E-63 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS03050 7ec18c3ac63dcf18c34a193f94bbbbd0 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 316 487 1.5E-39 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS03050 7ec18c3ac63dcf18c34a193f94bbbbd0 545 SUPERFAMILY SSF55785 20 115 1.13E-26 T 29-03-2018 IPR000014 PAS domain CVS42_RS03050 7ec18c3ac63dcf18c34a193f94bbbbd0 545 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 110 1.5E-12 T 29-03-2018 IPR000014 PAS domain CVS42_RS03050 7ec18c3ac63dcf18c34a193f94bbbbd0 545 Pfam PF08447 PAS fold 31 115 1.5E-17 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CVS42_RS03050 7ec18c3ac63dcf18c34a193f94bbbbd0 545 Gene3D G3DSA:1.10.287.950 124 299 0.0017 T 29-03-2018 CVS42_RS03050 7ec18c3ac63dcf18c34a193f94bbbbd0 545 Gene3D G3DSA:1.10.287.950 300 524 6.5E-49 T 29-03-2018 CVS42_RS21460 7e8e43aebf79a26a32dedb02d79c8189 216 Pfam PF01965 DJ-1/PfpI family 13 141 9.0E-7 T 29-03-2018 IPR002818 DJ-1/PfpI CVS42_RS21460 7e8e43aebf79a26a32dedb02d79c8189 216 Gene3D G3DSA:3.40.50.880 1 216 3.5E-36 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS21460 7e8e43aebf79a26a32dedb02d79c8189 216 SUPERFAMILY SSF52317 1 213 5.06E-59 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS21460 7e8e43aebf79a26a32dedb02d79c8189 216 PIRSF PIRSF006320 1 216 6.5E-108 T 29-03-2018 IPR026041 Glyoxalase ElbB CVS42_RS12485 cd1446bcc30a2f776e222d809ee5cc36 452 Gene3D G3DSA:1.20.1250.20 240 451 3.7E-33 T 29-03-2018 CVS42_RS12485 cd1446bcc30a2f776e222d809ee5cc36 452 Pfam PF07690 Major Facilitator Superfamily 34 400 1.2E-50 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS12485 cd1446bcc30a2f776e222d809ee5cc36 452 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 438 2.3E-239 T 29-03-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 CVS42_RS12485 cd1446bcc30a2f776e222d809ee5cc36 452 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 29-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 CVS42_RS12485 cd1446bcc30a2f776e222d809ee5cc36 452 Gene3D G3DSA:1.20.1250.20 18 225 2.1E-34 T 29-03-2018 CVS42_RS12485 cd1446bcc30a2f776e222d809ee5cc36 452 SUPERFAMILY SSF103473 13 436 7.72E-85 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS12485 cd1446bcc30a2f776e222d809ee5cc36 452 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 8.3E-153 T 29-03-2018 CVS42_RS12485 cd1446bcc30a2f776e222d809ee5cc36 452 PIRSF PIRSF002808 5 451 1.3E-173 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 347 371 3.0E-63 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 310 318 3.0E-63 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 212 234 3.0E-63 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 399 415 3.0E-63 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 332 344 3.0E-63 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 244 259 3.0E-63 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 264 274 3.0E-63 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 473 491 3.0E-63 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 438 459 3.0E-63 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 SUPERFAMILY SSF51905 203 509 2.52E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 SUPERFAMILY SSF52833 1 99 9.39E-26 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 SUPERFAMILY SSF52833 103 195 1.34E-21 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 PIRSF PIRSF000238 1 516 1.1E-255 T 29-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 211 485 2.5E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 Gene3D G3DSA:3.40.30.10 1 92 2.1E-22 T 29-03-2018 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 351 369 7.5E-39 T 29-03-2018 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 436 452 7.5E-39 T 29-03-2018 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 213 232 7.5E-39 T 29-03-2018 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 463 485 7.5E-39 T 29-03-2018 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 309 327 7.5E-39 T 29-03-2018 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 Pfam PF13192 Thioredoxin domain 123 193 1.1E-9 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 Gene3D G3DSA:3.40.30.10 101 195 4.7E-7 T 29-03-2018 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 513 8.8E-244 T 29-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 339 359 - T 29-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 Gene3D G3DSA:3.50.50.60 198 365 2.7E-33 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS07540 a4c7e1601524c3a2847d4c199a0bcc94 526 Gene3D G3DSA:3.50.50.60 366 525 2.7E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS15915 d14fe0431695dd57e308129be36d259e 234 Pfam PF04231 Endonuclease I 27 231 2.8E-43 T 29-03-2018 IPR007346 Endonuclease I GO:0004518 CVS42_RS15915 d14fe0431695dd57e308129be36d259e 234 SUPERFAMILY SSF54060 23 233 1.29E-84 T 29-03-2018 CVS42_RS08270 fcbed9b1dbae2a3705b26094036e8713 200 SMART SM00493 81 166 2.7E-19 T 29-03-2018 IPR006171 TOPRIM domain CVS42_RS08270 fcbed9b1dbae2a3705b26094036e8713 200 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 98.094 T 29-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CVS42_RS08270 fcbed9b1dbae2a3705b26094036e8713 200 Gene3D G3DSA:3.40.1360.10 77 171 7.9E-34 T 29-03-2018 CVS42_RS08270 fcbed9b1dbae2a3705b26094036e8713 200 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 3.2E-76 T 29-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CVS42_RS08270 fcbed9b1dbae2a3705b26094036e8713 200 SUPERFAMILY SSF111304 2 199 6.54E-70 T 29-03-2018 IPR023627 Recombination protein RecR CVS42_RS08270 fcbed9b1dbae2a3705b26094036e8713 200 Pfam PF02132 RecR protein 41 77 5.0E-13 T 29-03-2018 IPR023628 Recombination protein RecR, C4-type zinc finger CVS42_RS08270 fcbed9b1dbae2a3705b26094036e8713 200 Pfam PF13662 Toprim domain 83 172 1.1E-22 T 29-03-2018 IPR006171 TOPRIM domain CVS42_RS02210 416105959ac2888e343e7f44fd678e4b 505 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 25 489 7.9E-65 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CVS42_RS02210 416105959ac2888e343e7f44fd678e4b 505 Gene3D G3DSA:1.20.1250.20 274 494 1.5E-15 T 29-03-2018 CVS42_RS02210 416105959ac2888e343e7f44fd678e4b 505 Pfam PF00854 POT family 112 446 8.2E-28 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CVS42_RS02210 416105959ac2888e343e7f44fd678e4b 505 SUPERFAMILY SSF103473 200 490 5.36E-12 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS02210 416105959ac2888e343e7f44fd678e4b 505 SUPERFAMILY SSF103473 26 203 7.72E-15 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS02210 416105959ac2888e343e7f44fd678e4b 505 Gene3D G3DSA:1.20.1250.20 22 205 1.1E-18 T 29-03-2018 CVS42_RS16515 9e00501e9969286b580c65cc580ae0ac 514 Gene3D G3DSA:1.10.1670.10 454 493 2.6E-11 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CVS42_RS16515 9e00501e9969286b580c65cc580ae0ac 514 Gene3D G3DSA:3.40.10.10 13 88 2.4E-23 T 29-03-2018 IPR035451 Ada-like domain CVS42_RS16515 9e00501e9969286b580c65cc580ae0ac 514 Gene3D G3DSA:3.30.310.20 218 320 2.7E-30 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CVS42_RS16515 9e00501e9969286b580c65cc580ae0ac 514 Pfam PF12833 Helix-turn-helix domain 119 197 2.0E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS16515 9e00501e9969286b580c65cc580ae0ac 514 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 341 455 4.6E-5 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CVS42_RS16515 9e00501e9969286b580c65cc580ae0ac 514 Gene3D G3DSA:1.10.340.30 321 453 7.2E-27 T 29-03-2018 CVS42_RS16515 9e00501e9969286b580c65cc580ae0ac 514 Pfam PF02805 Metal binding domain of Ada 23 86 7.0E-28 T 29-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 CVS42_RS16515 9e00501e9969286b580c65cc580ae0ac 514 SMART SM00478 344 489 2.1E-7 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CVS42_RS16515 9e00501e9969286b580c65cc580ae0ac 514 SUPERFAMILY SSF57884 15 93 9.81E-31 T 29-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 CVS42_RS16515 9e00501e9969286b580c65cc580ae0ac 514 SUPERFAMILY SSF55945 218 314 2.35E-23 T 29-03-2018 CVS42_RS16515 9e00501e9969286b580c65cc580ae0ac 514 Gene3D G3DSA:1.10.10.60 151 211 1.1E-11 T 29-03-2018 CVS42_RS16515 9e00501e9969286b580c65cc580ae0ac 514 SMART SM00342 113 196 1.3E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS16515 9e00501e9969286b580c65cc580ae0ac 514 SUPERFAMILY SSF48150 324 487 4.71E-31 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CVS42_RS16515 9e00501e9969286b580c65cc580ae0ac 514 Pfam PF06029 AlkA N-terminal domain 218 334 2.2E-31 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CVS42_RS16515 9e00501e9969286b580c65cc580ae0ac 514 SMART SM01009 218 334 1.0E-48 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CVS42_RS16515 9e00501e9969286b580c65cc580ae0ac 514 Gene3D G3DSA:1.10.10.60 96 150 1.8E-7 T 29-03-2018 CVS42_RS16515 9e00501e9969286b580c65cc580ae0ac 514 SUPERFAMILY SSF46689 149 199 7.89E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS07730 24680553a96088bb244110101f670950 241 TIGRFAM TIGR01298 RNaseT: ribonuclease T 24 222 1.4E-107 T 29-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CVS42_RS07730 24680553a96088bb244110101f670950 241 SMART SM00479 32 217 2.2E-36 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CVS42_RS07730 24680553a96088bb244110101f670950 241 Hamap MF_00157 Ribonuclease T [rnt]. 1 241 119.948 T 29-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CVS42_RS07730 24680553a96088bb244110101f670950 241 Pfam PF00929 Exonuclease 34 208 3.0E-41 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CVS42_RS07730 24680553a96088bb244110101f670950 241 SUPERFAMILY SSF53098 23 221 3.71E-58 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS07730 24680553a96088bb244110101f670950 241 Gene3D G3DSA:3.30.420.10 23 227 1.5E-31 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS21820 6a0a9a33a2f2c1f47a31045243388e5c 117 Gene3D G3DSA:1.25.40.10 27 109 3.5E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS21820 6a0a9a33a2f2c1f47a31045243388e5c 117 SUPERFAMILY SSF48452 68 108 7.59E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS21820 6a0a9a33a2f2c1f47a31045243388e5c 117 Pfam PF16068 Domain of unknown function (DUF4810) 26 108 7.8E-31 T 29-03-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats CVS42_RS21820 6a0a9a33a2f2c1f47a31045243388e5c 117 PIRSF PIRSF020555 1 117 5.5E-38 T 29-03-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats CVS42_RS06475 e3d65663930507e0fd5be08f23910938 695 Gene3D G3DSA:1.10.287.950 464 695 1.2E-48 T 29-03-2018 CVS42_RS06475 e3d65663930507e0fd5be08f23910938 695 Gene3D G3DSA:1.10.287.1060 355 455 0.047 T 29-03-2018 CVS42_RS06475 e3d65663930507e0fd5be08f23910938 695 SMART SM00283 433 694 9.9E-63 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS06475 e3d65663930507e0fd5be08f23910938 695 Pfam PF02743 Cache domain 49 314 1.9E-16 T 29-03-2018 IPR033479 Double Cache domain 1 CVS42_RS06475 e3d65663930507e0fd5be08f23910938 695 Gene3D G3DSA:3.30.450.20 214 332 5.1E-9 T 29-03-2018 CVS42_RS06475 e3d65663930507e0fd5be08f23910938 695 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 453 482 3.3E-21 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS06475 e3d65663930507e0fd5be08f23910938 695 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 560 589 3.3E-21 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS06475 e3d65663930507e0fd5be08f23910938 695 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 531 558 3.3E-21 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS06475 e3d65663930507e0fd5be08f23910938 695 SMART SM00304 364 418 2.4E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS06475 e3d65663930507e0fd5be08f23910938 695 SMART SM00304 453 520 90.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS06475 e3d65663930507e0fd5be08f23910938 695 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 505 660 3.6E-41 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS06475 e3d65663930507e0fd5be08f23910938 695 SUPERFAMILY SSF58104 386 695 1.57E-73 T 29-03-2018 CVS42_RS06475 e3d65663930507e0fd5be08f23910938 695 Gene3D G3DSA:3.30.450.20 76 213 4.7E-19 T 29-03-2018 CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 SMART SM00636 158 546 2.5E-157 T 29-03-2018 IPR011583 Chitinase II GO:0008061 CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 SUPERFAMILY SSF51445 135 446 1.66E-97 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 SUPERFAMILY SSF51445 519 560 1.66E-97 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 SUPERFAMILY SSF54556 446 518 2.14E-17 T 29-03-2018 IPR029070 Chitinase insertion domain CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 Pfam PF02010 REJ domain 576 767 4.9E-6 T 29-03-2018 IPR002859 PKD/REJ-like domain CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 SUPERFAMILY SSF51055 825 865 2.22E-12 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 Gene3D G3DSA:2.60.40.10 25 130 1.1E-20 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 Gene3D G3DSA:3.20.20.80 132 571 7.8E-88 T 29-03-2018 CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 Gene3D G3DSA:2.40.50.70 653 686 1.5E-4 T 29-03-2018 CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 SUPERFAMILY SSF81296 25 132 1.27E-36 T 29-03-2018 IPR014756 Immunoglobulin E-set CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 SMART SM00495 775 818 5.6E-16 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 SMART SM00495 822 864 2.3E-11 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 SUPERFAMILY SSF51055 766 821 1.7E-14 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 29-03-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 Gene3D G3DSA:2.10.10.20 824 867 3.4E-13 T 29-03-2018 CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 Gene3D G3DSA:2.10.10.20 770 821 4.6E-16 T 29-03-2018 CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 Gene3D G3DSA:3.40.1850.10 687 768 3.9E-10 T 29-03-2018 CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 Gene3D G3DSA:2.60.40.10 572 652 1.2E-15 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 Pfam PF08329 Chitinase A, N-terminal domain 24 155 6.9E-60 T 29-03-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 SMART SM00089 670 756 0.48 T 29-03-2018 IPR022409 PKD/Chitinase domain CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 SMART SM00089 43 133 1.1E-7 T 29-03-2018 IPR022409 PKD/Chitinase domain CVS42_RS04175 1e9c09d22dc910b65a851f0e103b8788 870 Pfam PF00704 Glycosyl hydrolases family 18 160 546 2.5E-87 T 29-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 CVS42_RS12880 ac254a356f9daefd0084964e1655a1ff 342 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 29 339 55.314 T 29-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 CVS42_RS12880 ac254a356f9daefd0084964e1655a1ff 342 Gene3D G3DSA:3.40.50.150 90 339 2.7E-24 T 29-03-2018 CVS42_RS12880 ac254a356f9daefd0084964e1655a1ff 342 SUPERFAMILY SSF53335 111 339 7.49E-34 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS12880 ac254a356f9daefd0084964e1655a1ff 342 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 24 338 5.0E-150 T 29-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 CVS42_RS12880 ac254a356f9daefd0084964e1655a1ff 342 Pfam PF08003 Protein of unknown function (DUF1698) 24 339 2.3E-161 T 29-03-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like CVS42_RS10170 726f0a7bc43cfbbd1237a498c7f8a716 327 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 29-03-2018 CVS42_RS10170 726f0a7bc43cfbbd1237a498c7f8a716 327 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 246 5.9E-12 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CVS42_RS10170 726f0a7bc43cfbbd1237a498c7f8a716 327 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 326 7.3E-122 T 29-03-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 CVS42_RS10170 726f0a7bc43cfbbd1237a498c7f8a716 327 SUPERFAMILY SSF53822 60 314 3.64E-39 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CVS42_RS10170 726f0a7bc43cfbbd1237a498c7f8a716 327 Gene3D G3DSA:3.40.50.2300 60 176 1.5E-23 T 29-03-2018 CVS42_RS10170 726f0a7bc43cfbbd1237a498c7f8a716 327 SMART SM00354 1 73 4.0E-26 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS10170 726f0a7bc43cfbbd1237a498c7f8a716 327 Gene3D G3DSA:3.40.50.2300 177 313 1.7E-15 T 29-03-2018 CVS42_RS10170 726f0a7bc43cfbbd1237a498c7f8a716 327 Gene3D G3DSA:1.10.260.40 1 59 4.3E-18 T 29-03-2018 CVS42_RS10170 726f0a7bc43cfbbd1237a498c7f8a716 327 SUPERFAMILY SSF47413 2 58 1.48E-13 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS10170 726f0a7bc43cfbbd1237a498c7f8a716 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 3.8E-16 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS14610 9347218986d39c07de770dfe886a2f7c 193 SUPERFAMILY SSF49899 5 183 1.15E-34 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CVS42_RS14610 9347218986d39c07de770dfe886a2f7c 193 Pfam PF07081 Protein of unknown function (DUF1349) 9 183 3.1E-67 T 29-03-2018 IPR009784 Protein of unknown function DUF1349 CVS42_RS14610 9347218986d39c07de770dfe886a2f7c 193 Gene3D G3DSA:2.60.120.200 3 184 1.5E-38 T 29-03-2018 CVS42_RS14610 9347218986d39c07de770dfe886a2f7c 193 PIRSF PIRSF022704 1 193 3.9E-68 T 29-03-2018 IPR015987 Uncharacterised conserved protein UCP022704 CVS42_RS07500 bb01c09cb9405b3d28f301223a98d9d6 1048 Pfam PF13183 4Fe-4S dicluster domain 599 711 3.7E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS07500 bb01c09cb9405b3d28f301223a98d9d6 1048 Gene3D G3DSA:1.10.1060.10 574 726 7.5E-12 T 29-03-2018 CVS42_RS07500 bb01c09cb9405b3d28f301223a98d9d6 1048 Gene3D G3DSA:3.30.43.10 29 130 3.1E-17 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CVS42_RS07500 bb01c09cb9405b3d28f301223a98d9d6 1048 Pfam PF02913 FAD linked oxidases, C-terminal domain 306 563 1.4E-52 T 29-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CVS42_RS07500 bb01c09cb9405b3d28f301223a98d9d6 1048 SUPERFAMILY SSF46548 678 716 3.14E-7 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CVS42_RS07500 bb01c09cb9405b3d28f301223a98d9d6 1048 SUPERFAMILY SSF46548 544 646 3.14E-7 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CVS42_RS07500 bb01c09cb9405b3d28f301223a98d9d6 1048 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 697 708 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS07500 bb01c09cb9405b3d28f301223a98d9d6 1048 SUPERFAMILY SSF56176 56 217 1.43E-52 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CVS42_RS07500 bb01c09cb9405b3d28f301223a98d9d6 1048 SUPERFAMILY SSF56176 265 307 1.43E-52 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CVS42_RS07500 bb01c09cb9405b3d28f301223a98d9d6 1048 SUPERFAMILY SSF55103 284 563 8.01E-47 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CVS42_RS07500 bb01c09cb9405b3d28f301223a98d9d6 1048 Gene3D G3DSA:1.10.45.10 498 563 4.7E-5 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CVS42_RS07500 bb01c09cb9405b3d28f301223a98d9d6 1048 Gene3D G3DSA:3.30.465.10 131 329 1.5E-43 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CVS42_RS07500 bb01c09cb9405b3d28f301223a98d9d6 1048 Pfam PF01565 FAD binding domain 77 215 1.2E-36 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CVS42_RS16150 74c75951256d4c0b4bcc9f90b2711b01 282 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 282 162.25 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CVS42_RS16150 74c75951256d4c0b4bcc9f90b2711b01 282 Gene3D G3DSA:3.30.1130.10 24 138 3.4E-41 T 29-03-2018 CVS42_RS16150 74c75951256d4c0b4bcc9f90b2711b01 282 Gene3D G3DSA:3.30.1130.10 145 282 1.5E-48 T 29-03-2018 CVS42_RS16150 74c75951256d4c0b4bcc9f90b2711b01 282 Pfam PF14489 QueF-like protein 196 269 3.1E-25 T 29-03-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CVS42_RS16150 74c75951256d4c0b4bcc9f90b2711b01 282 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 24 133 9.4E-49 T 29-03-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CVS42_RS16150 74c75951256d4c0b4bcc9f90b2711b01 282 SUPERFAMILY SSF55620 186 266 8.15E-9 T 29-03-2018 CVS42_RS16150 74c75951256d4c0b4bcc9f90b2711b01 282 PIRSF PIRSF004750 10 282 3.0E-125 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CVS42_RS16150 74c75951256d4c0b4bcc9f90b2711b01 282 TIGRFAM TIGR03138 QueF: queuine synthase 15 282 4.1E-126 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CVS42_RS17735 83e020a4f6ca9efc3a52eb1fc5b192ab 470 SUPERFAMILY SSF48024 10 116 1.96E-29 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CVS42_RS17735 83e020a4f6ca9efc3a52eb1fc5b192ab 470 SUPERFAMILY SSF52540 187 437 4.4E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS17735 83e020a4f6ca9efc3a52eb1fc5b192ab 470 Pfam PF00772 DnaB-like helicase N terminal domain 11 110 2.5E-28 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CVS42_RS17735 83e020a4f6ca9efc3a52eb1fc5b192ab 470 Pfam PF03796 DnaB-like helicase C terminal domain 189 438 1.8E-64 T 29-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CVS42_RS17735 83e020a4f6ca9efc3a52eb1fc5b192ab 470 Gene3D G3DSA:1.10.860.10 1 151 1.1E-32 T 29-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CVS42_RS17735 83e020a4f6ca9efc3a52eb1fc5b192ab 470 Gene3D G3DSA:3.40.50.300 170 457 4.2E-43 T 29-03-2018 CVS42_RS01480 de5194ce2e9eb4c7aa395b3ebd39bece 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 495 41.197 T 29-03-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 CVS42_RS01480 de5194ce2e9eb4c7aa395b3ebd39bece 502 SUPERFAMILY SSF53187 179 493 3.77E-126 T 29-03-2018 CVS42_RS01480 de5194ce2e9eb4c7aa395b3ebd39bece 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 347 354 - T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CVS42_RS01480 de5194ce2e9eb4c7aa395b3ebd39bece 502 PRINTS PR00481 Cytosol aminopeptidase signature 262 279 1.6E-56 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS01480 de5194ce2e9eb4c7aa395b3ebd39bece 502 PRINTS PR00481 Cytosol aminopeptidase signature 371 386 1.6E-56 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS01480 de5194ce2e9eb4c7aa395b3ebd39bece 502 PRINTS PR00481 Cytosol aminopeptidase signature 284 305 1.6E-56 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS01480 de5194ce2e9eb4c7aa395b3ebd39bece 502 PRINTS PR00481 Cytosol aminopeptidase signature 343 363 1.6E-56 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS01480 de5194ce2e9eb4c7aa395b3ebd39bece 502 PRINTS PR00481 Cytosol aminopeptidase signature 321 342 1.6E-56 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS01480 de5194ce2e9eb4c7aa395b3ebd39bece 502 Gene3D G3DSA:3.40.220.10 1 160 6.4E-32 T 29-03-2018 CVS42_RS01480 de5194ce2e9eb4c7aa395b3ebd39bece 502 SUPERFAMILY SSF52949 1 184 2.18E-52 T 29-03-2018 CVS42_RS01480 de5194ce2e9eb4c7aa395b3ebd39bece 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 486 5.6E-126 T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CVS42_RS01480 de5194ce2e9eb4c7aa395b3ebd39bece 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 7.2E-34 T 29-03-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CVS42_RS01480 de5194ce2e9eb4c7aa395b3ebd39bece 502 Gene3D G3DSA:3.40.630.10 170 500 7.3E-139 T 29-03-2018 CVS42_RS17350 f30a59643fa412cdbd644ce99c82e880 328 Pfam PF11059 Protein of unknown function (DUF2860) 29 327 3.1E-79 T 29-03-2018 IPR016896 Protein of unknown function DUF2860 CVS42_RS17350 f30a59643fa412cdbd644ce99c82e880 328 PIRSF PIRSF028696 1 328 1.0E-85 T 29-03-2018 IPR016896 Protein of unknown function DUF2860 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 Gene3D G3DSA:3.40.50.620 321 543 7.2E-70 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 Gene3D G3DSA:3.90.740.10 190 249 4.0E-19 T 29-03-2018 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 6.9E-226 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 883 946 2.5E-16 T 29-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 SUPERFAMILY SSF52374 364 571 2.56E-136 T 29-03-2018 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 SUPERFAMILY SSF52374 1 192 2.56E-136 T 29-03-2018 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 SUPERFAMILY SSF52374 609 641 2.56E-136 T 29-03-2018 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 Pfam PF08264 Anticodon-binding domain of tRNA 674 825 1.8E-40 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 SUPERFAMILY SSF46589 883 947 1.2E-16 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 Gene3D G3DSA:1.10.287.380 876 946 9.8E-25 T 29-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 SUPERFAMILY SSF47323 642 897 2.43E-68 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 Gene3D G3DSA:3.40.50.620 15 189 1.3E-27 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 2.7E-34 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 2.7E-34 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 2.7E-34 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 2.7E-34 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 2.7E-34 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 931 0.0 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 948 16.014 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 Gene3D G3DSA:1.10.730.10 544 854 1.8E-69 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS01470 a37f931836d809b6d5f52536430a9833 950 SUPERFAMILY SSF50677 191 363 2.35E-57 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CVS42_RS14715 1ed868686479072d6b2f41299156da87 397 SUPERFAMILY SSF53686 5 389 1.44E-143 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CVS42_RS14715 1ed868686479072d6b2f41299156da87 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 1.7E-50 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CVS42_RS14715 1ed868686479072d6b2f41299156da87 397 PIRSF PIRSF001413 2 395 2.5E-166 T 29-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CVS42_RS14715 1ed868686479072d6b2f41299156da87 397 Gene3D G3DSA:3.40.50.1100 8 195 1.4E-44 T 29-03-2018 CVS42_RS14715 1ed868686479072d6b2f41299156da87 397 Gene3D G3DSA:3.40.50.1100 196 397 2.1E-38 T 29-03-2018 CVS42_RS14715 1ed868686479072d6b2f41299156da87 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.851 T 29-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CVS42_RS14715 1ed868686479072d6b2f41299156da87 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 29-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CVS42_RS14715 1ed868686479072d6b2f41299156da87 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 388 1.5E-190 T 29-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CVS42_RS00980 c3968ee01e6adcdce9e92b3a878d939f 335 Gene3D G3DSA:3.40.50.2300 175 335 2.9E-34 T 29-03-2018 CVS42_RS00980 c3968ee01e6adcdce9e92b3a878d939f 335 Gene3D G3DSA:1.10.10.10 4 24 1.2E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS00980 c3968ee01e6adcdce9e92b3a878d939f 335 Gene3D G3DSA:3.40.50.2300 68 174 1.7E-25 T 29-03-2018 CVS42_RS00980 c3968ee01e6adcdce9e92b3a878d939f 335 SUPERFAMILY SSF53822 66 321 7.26E-53 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CVS42_RS00980 c3968ee01e6adcdce9e92b3a878d939f 335 Gene3D G3DSA:1.10.260.40 25 67 7.7E-17 T 29-03-2018 CVS42_RS00980 c3968ee01e6adcdce9e92b3a878d939f 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 29-03-2018 CVS42_RS00980 c3968ee01e6adcdce9e92b3a878d939f 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 2.7E-18 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS00980 c3968ee01e6adcdce9e92b3a878d939f 335 Pfam PF13377 Periplasmic binding protein-like domain 176 333 2.0E-23 T 29-03-2018 CVS42_RS00980 c3968ee01e6adcdce9e92b3a878d939f 335 SUPERFAMILY SSF47413 7 65 8.04E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS00980 c3968ee01e6adcdce9e92b3a878d939f 335 SMART SM00354 8 78 9.6E-28 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS18540 0be45e60d9968f3059f74c980307c4d2 797 Gene3D G3DSA:1.25.40.10 192 637 4.4E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS18540 0be45e60d9968f3059f74c980307c4d2 797 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 7 796 2.5E-262 T 29-03-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:0022891|GO:0042710 CVS42_RS18540 0be45e60d9968f3059f74c980307c4d2 797 SUPERFAMILY SSF48452 406 457 1.79E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS18540 0be45e60d9968f3059f74c980307c4d2 797 SUPERFAMILY SSF48452 96 146 1.79E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS18540 0be45e60d9968f3059f74c980307c4d2 797 Gene3D G3DSA:1.25.40.10 102 191 2.1E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS18540 0be45e60d9968f3059f74c980307c4d2 797 SUPERFAMILY SSF48452 289 457 7.59E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS18540 0be45e60d9968f3059f74c980307c4d2 797 Gene3D G3DSA:1.25.40.10 41 101 0.068 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS21950 68f30ffcee7e79f7e9e1e991dab7f047 1168 SUPERFAMILY SSF50969 195 361 7.06E-7 T 29-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CVS42_RS21950 68f30ffcee7e79f7e9e1e991dab7f047 1168 Pfam PF12561 ToxR activated gene A lipoprotein 869 964 6.8E-11 T 29-03-2018 IPR022218 ToxR activated gene A lipoprotein CVS42_RS21950 68f30ffcee7e79f7e9e1e991dab7f047 1168 Gene3D G3DSA:2.130.10.10 113 456 5.3E-9 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CVS42_RS21950 68f30ffcee7e79f7e9e1e991dab7f047 1168 SMART SM00495 1113 1164 1.1E-7 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS21950 68f30ffcee7e79f7e9e1e991dab7f047 1168 Gene3D G3DSA:2.10.10.20 1101 1168 6.3E-10 T 29-03-2018 CVS42_RS17665 8edf0f3fa413dd221528ca23c689d29a 480 Gene3D G3DSA:1.10.275.10 5 143 6.5E-50 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CVS42_RS17665 8edf0f3fa413dd221528ca23c689d29a 480 PRINTS PR00145 Argininosuccinate lyase family signature 139 161 2.5E-5 T 29-03-2018 CVS42_RS17665 8edf0f3fa413dd221528ca23c689d29a 480 PRINTS PR00145 Argininosuccinate lyase family signature 180 200 2.5E-5 T 29-03-2018 CVS42_RS17665 8edf0f3fa413dd221528ca23c689d29a 480 PRINTS PR00145 Argininosuccinate lyase family signature 322 338 2.5E-5 T 29-03-2018 CVS42_RS17665 8edf0f3fa413dd221528ca23c689d29a 480 ProSitePatterns PS00163 Fumarate lyases signature. 322 331 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CVS42_RS17665 8edf0f3fa413dd221528ca23c689d29a 480 Gene3D G3DSA:1.20.200.10 144 420 1.5E-72 T 29-03-2018 CVS42_RS17665 8edf0f3fa413dd221528ca23c689d29a 480 Pfam PF10415 Fumarase C C-terminus 413 465 3.8E-17 T 29-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CVS42_RS17665 8edf0f3fa413dd221528ca23c689d29a 480 PRINTS PR00149 Fumarate lyase superfamily signature 322 338 1.1E-27 T 29-03-2018 IPR000362 Fumarate lyase family CVS42_RS17665 8edf0f3fa413dd221528ca23c689d29a 480 PRINTS PR00149 Fumarate lyase superfamily signature 140 158 1.1E-27 T 29-03-2018 IPR000362 Fumarate lyase family CVS42_RS17665 8edf0f3fa413dd221528ca23c689d29a 480 PRINTS PR00149 Fumarate lyase superfamily signature 185 203 1.1E-27 T 29-03-2018 IPR000362 Fumarate lyase family CVS42_RS17665 8edf0f3fa413dd221528ca23c689d29a 480 PRINTS PR00149 Fumarate lyase superfamily signature 276 303 1.1E-27 T 29-03-2018 IPR000362 Fumarate lyase family CVS42_RS17665 8edf0f3fa413dd221528ca23c689d29a 480 Pfam PF00206 Lyase 15 347 1.1E-101 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal CVS42_RS17665 8edf0f3fa413dd221528ca23c689d29a 480 SUPERFAMILY SSF48557 5 459 3.09E-140 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CVS42_RS17665 8edf0f3fa413dd221528ca23c689d29a 480 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 8 474 6.9E-242 T 29-03-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 CVS42_RS17665 8edf0f3fa413dd221528ca23c689d29a 480 Gene3D G3DSA:1.10.40.30 421 470 4.1E-18 T 29-03-2018 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 PRINTS PR00046 Major sigma-70 factor signature 595 606 6.7E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 PRINTS PR00046 Major sigma-70 factor signature 580 595 6.7E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 PRINTS PR00046 Major sigma-70 factor signature 435 443 6.7E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 PRINTS PR00046 Major sigma-70 factor signature 411 424 6.7E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 PRINTS PR00046 Major sigma-70 factor signature 559 571 6.7E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 383 619 4.6E-121 T 29-03-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 Pfam PF04545 Sigma-70, region 4 555 608 1.0E-18 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 SUPERFAMILY SSF88659 517 619 9.16E-26 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 Pfam PF00140 Sigma-70 factor, region 1.2 100 130 1.8E-12 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 580 606 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 SUPERFAMILY SSF88946 117 454 8.24E-100 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 Pfam PF03979 Sigma-70 factor, region 1.1 8 83 5.9E-30 T 29-03-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 383 608 1.6E-38 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 Gene3D G3DSA:1.10.10.10 457 507 7.7E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 411 424 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 Pfam PF04539 Sigma-70 region 3 466 542 4.3E-29 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 Pfam PF04546 Sigma-70, non-essential region 141 356 7.3E-70 T 29-03-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 Gene3D G3DSA:1.10.10.10 549 620 4.1E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 Gene3D G3DSA:1.10.601.10 117 456 2.6E-105 T 29-03-2018 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 Gene3D G3DSA:1.10.601.10 3 116 1.2E-13 T 29-03-2018 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 7 620 46.563 T 29-03-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 Pfam PF04542 Sigma-70 region 2 387 456 1.7E-21 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS17695 8b5d4290b6d29a1450eea5df3d6c887f 621 SUPERFAMILY SSF88659 460 533 1.14E-20 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS13940 d781210023475d5f9e12351954810b83 381 Pfam PF01979 Amidohydrolase family 51 377 6.5E-40 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CVS42_RS13940 d781210023475d5f9e12351954810b83 381 SUPERFAMILY SSF51338 1 53 9.78E-16 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS13940 d781210023475d5f9e12351954810b83 381 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 376 1.3E-141 T 29-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CVS42_RS13940 d781210023475d5f9e12351954810b83 381 Gene3D G3DSA:2.30.40.10 2 68 3.6E-10 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS13940 d781210023475d5f9e12351954810b83 381 SUPERFAMILY SSF51556 54 350 9.28E-98 T 29-03-2018 IPR032466 Metal-dependent hydrolase CVS42_RS13940 d781210023475d5f9e12351954810b83 381 PIRSF PIRSF038994 1 381 6.4E-114 T 29-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CVS42_RS13940 d781210023475d5f9e12351954810b83 381 Gene3D G3DSA:3.20.20.140 69 350 9.5E-94 T 29-03-2018 CVS42_RS19185 085b39b30153b8cdebd293c63c039582 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 1.1E-23 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS19185 085b39b30153b8cdebd293c63c039582 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 83 4.0E-23 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS19185 085b39b30153b8cdebd293c63c039582 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CVS42_RS19185 085b39b30153b8cdebd293c63c039582 90 Gene3D G3DSA:3.30.1340.10 2 89 1.8E-23 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS19185 085b39b30153b8cdebd293c63c039582 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CVS42_RS19185 085b39b30153b8cdebd293c63c039582 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 7.6E-11 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS19185 085b39b30153b8cdebd293c63c039582 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 7.6E-11 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS19185 085b39b30153b8cdebd293c63c039582 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 7.6E-11 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS19185 085b39b30153b8cdebd293c63c039582 90 SUPERFAMILY SSF55594 4 90 2.62E-24 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS00725 593c0809fd0e90d8258c924216197a8d 377 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 308 337 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site CVS42_RS00725 593c0809fd0e90d8258c924216197a8d 377 Gene3D G3DSA:3.40.50.150 164 375 2.2E-33 T 29-03-2018 CVS42_RS00725 593c0809fd0e90d8258c924216197a8d 377 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site CVS42_RS00725 593c0809fd0e90d8258c924216197a8d 377 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 19 375 1.7E-172 T 29-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CVS42_RS00725 593c0809fd0e90d8258c924216197a8d 377 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 13 375 43.037 T 29-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CVS42_RS00725 593c0809fd0e90d8258c924216197a8d 377 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 19 375 2.2E-175 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CVS42_RS00725 593c0809fd0e90d8258c924216197a8d 377 SUPERFAMILY SSF53335 18 374 3.66E-52 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS14505 3038a02320abc02ae38f7d166d11de10 132 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 9.7E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS14505 3038a02320abc02ae38f7d166d11de10 132 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 28 9.8E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS07615 5d06db7081cb2b28f00659c86a2b0149 167 SUPERFAMILY SSF46785 2 133 1.03E-36 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS07615 5d06db7081cb2b28f00659c86a2b0149 167 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 5.2E-47 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CVS42_RS07615 5d06db7081cb2b28f00659c86a2b0149 167 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 29-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CVS42_RS07615 5d06db7081cb2b28f00659c86a2b0149 167 Gene3D G3DSA:1.10.10.10 1 141 1.0E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS07615 5d06db7081cb2b28f00659c86a2b0149 167 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 7.4E-65 T 29-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 CVS42_RS07615 5d06db7081cb2b28f00659c86a2b0149 167 Pfam PF02082 Transcriptional regulator 1 83 5.5E-28 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CVS42_RS13035 a518004db79ca75df6d60c8ea747d0a9 452 Gene3D G3DSA:3.40.50.980 29 115 0.097 T 29-03-2018 CVS42_RS13035 a518004db79ca75df6d60c8ea747d0a9 452 Pfam PF00501 AMP-binding enzyme 117 366 2.5E-40 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CVS42_RS13035 a518004db79ca75df6d60c8ea747d0a9 452 Gene3D G3DSA:2.30.38.10 284 359 4.4E-12 T 29-03-2018 CVS42_RS13035 a518004db79ca75df6d60c8ea747d0a9 452 Gene3D G3DSA:3.40.50.980 116 283 3.0E-29 T 29-03-2018 CVS42_RS13035 a518004db79ca75df6d60c8ea747d0a9 452 Gene3D G3DSA:3.30.300.30 363 452 7.2E-4 T 29-03-2018 CVS42_RS13035 a518004db79ca75df6d60c8ea747d0a9 452 SUPERFAMILY SSF56801 14 450 3.66E-61 T 29-03-2018 CVS42_RS21175 d0b4d97254b1c2d79dbefb41f9fd3ae9 498 Pfam PF00171 Aldehyde dehydrogenase family 33 492 1.6E-172 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS21175 d0b4d97254b1c2d79dbefb41f9fd3ae9 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CVS42_RS21175 d0b4d97254b1c2d79dbefb41f9fd3ae9 498 Gene3D G3DSA:3.40.309.10 283 479 7.1E-71 T 29-03-2018 CVS42_RS21175 d0b4d97254b1c2d79dbefb41f9fd3ae9 498 Gene3D G3DSA:3.40.605.10 6 282 1.2E-95 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS21175 d0b4d97254b1c2d79dbefb41f9fd3ae9 498 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CVS42_RS21175 d0b4d97254b1c2d79dbefb41f9fd3ae9 498 SUPERFAMILY SSF53720 9 496 2.75E-165 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CVS42_RS12635 0fce5181c681f4eb7306853cd2027a65 338 Gene3D G3DSA:3.10.290.10 4 65 1.4E-17 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS12635 0fce5181c681f4eb7306853cd2027a65 338 Gene3D G3DSA:3.30.70.1560 145 212 4.9E-23 T 29-03-2018 CVS42_RS12635 0fce5181c681f4eb7306853cd2027a65 338 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 5.4E-53 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CVS42_RS12635 0fce5181c681f4eb7306853cd2027a65 338 SMART SM00363 7 63 9.6E-14 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS12635 0fce5181c681f4eb7306853cd2027a65 338 SUPERFAMILY SSF55174 7 62 3.97E-14 T 29-03-2018 CVS42_RS12635 0fce5181c681f4eb7306853cd2027a65 338 Pfam PF01479 S4 domain 7 52 1.7E-13 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS12635 0fce5181c681f4eb7306853cd2027a65 338 Pfam PF00849 RNA pseudouridylate synthase 69 194 2.7E-14 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS12635 0fce5181c681f4eb7306853cd2027a65 338 Gene3D G3DSA:3.30.70.580 66 144 1.7E-15 T 29-03-2018 CVS42_RS12635 0fce5181c681f4eb7306853cd2027a65 338 SUPERFAMILY SSF55120 69 229 8.15E-38 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS12635 0fce5181c681f4eb7306853cd2027a65 338 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CVS42_RS12420 d4ee891666709aa867b5ac6e251e56ca 331 Gene3D G3DSA:3.40.50.300 46 170 6.6E-9 T 29-03-2018 CVS42_RS12420 d4ee891666709aa867b5ac6e251e56ca 331 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 324 42.026 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CVS42_RS12420 d4ee891666709aa867b5ac6e251e56ca 331 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 319 2.8E-86 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CVS42_RS12420 d4ee891666709aa867b5ac6e251e56ca 331 SUPERFAMILY SSF52540 48 177 3.84E-15 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS12420 d4ee891666709aa867b5ac6e251e56ca 331 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 12 318 1.6E-111 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CVS42_RS17240 a600e62a19ec40cdb4d8d2d52393c288 323 SUPERFAMILY SSF48576 6 322 3.45E-103 T 29-03-2018 IPR008949 Isoprenoid synthase domain CVS42_RS17240 a600e62a19ec40cdb4d8d2d52393c288 323 Gene3D G3DSA:1.10.600.10 1 323 3.3E-104 T 29-03-2018 IPR008949 Isoprenoid synthase domain CVS42_RS17240 a600e62a19ec40cdb4d8d2d52393c288 323 Pfam PF00348 Polyprenyl synthetase 32 271 8.9E-79 T 29-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 CVS42_RS17240 a600e62a19ec40cdb4d8d2d52393c288 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site CVS42_RS17240 a600e62a19ec40cdb4d8d2d52393c288 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site CVS42_RS19205 62fd0746e01d62913348281ae8c1c8f9 479 PRINTS PR00045 Sigma-54 factor signature 452 470 9.3E-31 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CVS42_RS19205 62fd0746e01d62913348281ae8c1c8f9 479 PRINTS PR00045 Sigma-54 factor signature 394 405 9.3E-31 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CVS42_RS19205 62fd0746e01d62913348281ae8c1c8f9 479 PRINTS PR00045 Sigma-54 factor signature 378 390 9.3E-31 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CVS42_RS19205 62fd0746e01d62913348281ae8c1c8f9 479 PRINTS PR00045 Sigma-54 factor signature 188 205 9.3E-31 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CVS42_RS19205 62fd0746e01d62913348281ae8c1c8f9 479 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 457 464 - T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CVS42_RS19205 62fd0746e01d62913348281ae8c1c8f9 479 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 366 385 - T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CVS42_RS19205 62fd0746e01d62913348281ae8c1c8f9 479 Gene3D G3DSA:1.10.10.10 325 412 2.2E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS19205 62fd0746e01d62913348281ae8c1c8f9 479 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 4.8E-16 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CVS42_RS19205 62fd0746e01d62913348281ae8c1c8f9 479 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 476 2.2E-158 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CVS42_RS19205 62fd0746e01d62913348281ae8c1c8f9 479 Pfam PF04963 Sigma-54 factor, core binding domain 114 305 1.1E-59 T 29-03-2018 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 CVS42_RS19205 62fd0746e01d62913348281ae8c1c8f9 479 PIRSF PIRSF000774 1 479 2.5E-155 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CVS42_RS19205 62fd0746e01d62913348281ae8c1c8f9 479 Pfam PF04552 Sigma-54, DNA binding domain 319 477 2.8E-71 T 29-03-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding CVS42_RS08825 541797f09848774be1b7adc1a899a8e6 314 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CVS42_RS08825 541797f09848774be1b7adc1a899a8e6 314 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 309 53.297 T 29-03-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 CVS42_RS08825 541797f09848774be1b7adc1a899a8e6 314 PIRSF PIRSF006621 1 314 5.0E-78 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CVS42_RS08825 541797f09848774be1b7adc1a899a8e6 314 SUPERFAMILY SSF51395 1 307 2.2E-71 T 29-03-2018 CVS42_RS08825 541797f09848774be1b7adc1a899a8e6 314 Pfam PF01207 Dihydrouridine synthase (Dus) 4 278 1.5E-78 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CVS42_RS08825 541797f09848774be1b7adc1a899a8e6 314 Gene3D G3DSA:3.20.20.70 1 241 2.4E-47 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS02365 b58581117e9fec3d21233ce517c8b9be 159 Pfam PF01047 MarR family 31 89 1.3E-14 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS02365 b58581117e9fec3d21233ce517c8b9be 159 SMART SM00347 24 124 1.1E-20 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS02365 b58581117e9fec3d21233ce517c8b9be 159 SUPERFAMILY SSF46785 4 140 1.16E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02365 b58581117e9fec3d21233ce517c8b9be 159 Gene3D G3DSA:1.10.10.10 1 145 9.3E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02365 b58581117e9fec3d21233ce517c8b9be 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 1.1E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS02365 b58581117e9fec3d21233ce517c8b9be 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 1.1E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS02365 b58581117e9fec3d21233ce517c8b9be 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 1.1E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS02365 b58581117e9fec3d21233ce517c8b9be 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 1.1E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS04770 d87e4acb992c32cd9484e799ad4a8665 742 Pfam PF00263 Bacterial type II and III secretion system protein 580 738 2.6E-47 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 CVS42_RS04770 d87e4acb992c32cd9484e799ad4a8665 742 Pfam PF03958 Bacterial type II/III secretion system short domain 421 485 2.1E-10 T 29-03-2018 IPR005644 NolW-like CVS42_RS04770 d87e4acb992c32cd9484e799ad4a8665 742 SMART SM00965 347 395 3.2E-8 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CVS42_RS04770 d87e4acb992c32cd9484e799ad4a8665 742 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 322 738 3.6E-161 T 29-03-2018 IPR013355 Type IV pilus secretin PilQ CVS42_RS04770 d87e4acb992c32cd9484e799ad4a8665 742 PRINTS PR00811 Bacterial general secretion pathway protein D signature 485 495 7.6E-21 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS04770 d87e4acb992c32cd9484e799ad4a8665 742 PRINTS PR00811 Bacterial general secretion pathway protein D signature 576 600 7.6E-21 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS04770 d87e4acb992c32cd9484e799ad4a8665 742 PRINTS PR00811 Bacterial general secretion pathway protein D signature 703 721 7.6E-21 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS04770 d87e4acb992c32cd9484e799ad4a8665 742 PRINTS PR00811 Bacterial general secretion pathway protein D signature 726 740 7.6E-21 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS04770 d87e4acb992c32cd9484e799ad4a8665 742 PRINTS PR00811 Bacterial general secretion pathway protein D signature 611 621 7.6E-21 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS18810 2ef5e31cae89b89db9175529229db835 360 Pfam PF00953 Glycosyl transferase family 4 99 283 2.8E-35 T 29-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CVS42_RS18810 2ef5e31cae89b89db9175529229db835 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 360 2.5E-151 T 29-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CVS42_RS18810 2ef5e31cae89b89db9175529229db835 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.133 T 29-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CVS42_RS18810 2ef5e31cae89b89db9175529229db835 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CVS42_RS18810 2ef5e31cae89b89db9175529229db835 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.9E-5 T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CVS42_RS18810 2ef5e31cae89b89db9175529229db835 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CVS42_RS21660 b1be5f769a87153684613c030a2ff723 860 SUPERFAMILY SSF56059 456 656 2.83E-21 T 29-03-2018 CVS42_RS21660 b1be5f769a87153684613c030a2ff723 860 SUPERFAMILY SSF52210 127 277 1.83E-33 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CVS42_RS21660 b1be5f769a87153684613c030a2ff723 860 SUPERFAMILY SSF52210 282 422 2.09E-28 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CVS42_RS21660 b1be5f769a87153684613c030a2ff723 860 SMART SM00881 9 104 1.2E-25 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CVS42_RS21660 b1be5f769a87153684613c030a2ff723 860 Gene3D G3DSA:3.30.1490.20 475 536 2.4E-25 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CVS42_RS21660 b1be5f769a87153684613c030a2ff723 860 SUPERFAMILY SSF51735 3 137 2.46E-32 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS21660 b1be5f769a87153684613c030a2ff723 860 Gene3D G3DSA:3.40.630.30 690 859 1.1E-22 T 29-03-2018 CVS42_RS21660 b1be5f769a87153684613c030a2ff723 860 Gene3D G3DSA:3.30.470.20 537 674 1.8E-17 T 29-03-2018 CVS42_RS21660 b1be5f769a87153684613c030a2ff723 860 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 149 275 6.3E-40 T 29-03-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain CVS42_RS21660 b1be5f769a87153684613c030a2ff723 860 Gene3D G3DSA:3.40.50.720 5 123 1.4E-32 T 29-03-2018 CVS42_RS21660 b1be5f769a87153684613c030a2ff723 860 SUPERFAMILY SSF55729 697 839 2.96E-20 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS21660 b1be5f769a87153684613c030a2ff723 860 Pfam PF13302 Acetyltransferase (GNAT) domain 698 837 1.3E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS21660 b1be5f769a87153684613c030a2ff723 860 Pfam PF13549 ATP-grasp domain 448 666 8.5E-63 T 29-03-2018 CVS42_RS21660 b1be5f769a87153684613c030a2ff723 860 Gene3D G3DSA:3.40.50.261 282 430 3.8E-29 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CVS42_RS21660 b1be5f769a87153684613c030a2ff723 860 Gene3D G3DSA:3.40.50.261 124 280 3.2E-32 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CVS42_RS21660 b1be5f769a87153684613c030a2ff723 860 Pfam PF13380 CoA binding domain 14 132 4.8E-21 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CVS42_RS04065 902a9a61aa9f95b354f12e33435b0e93 453 Gene3D G3DSA:3.60.10.10 20 451 3.1E-19 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS04065 902a9a61aa9f95b354f12e33435b0e93 453 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 37 443 2.1E-29 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS04065 902a9a61aa9f95b354f12e33435b0e93 453 SUPERFAMILY SSF56219 81 133 2.36E-18 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS04065 902a9a61aa9f95b354f12e33435b0e93 453 SUPERFAMILY SSF56219 169 208 2.36E-18 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS04065 902a9a61aa9f95b354f12e33435b0e93 453 SUPERFAMILY SSF56219 247 353 2.36E-18 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS04065 902a9a61aa9f95b354f12e33435b0e93 453 SUPERFAMILY SSF56219 384 452 2.36E-18 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS04065 902a9a61aa9f95b354f12e33435b0e93 453 SUPERFAMILY SSF56219 35 48 2.36E-18 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS07855 d2bacb286ca3d9b1caa9928154f677d3 262 SUPERFAMILY SSF53474 10 255 1.44E-48 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS07855 d2bacb286ca3d9b1caa9928154f677d3 262 PRINTS PR00412 Epoxide hydrolase signature 200 216 4.7E-5 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CVS42_RS07855 d2bacb286ca3d9b1caa9928154f677d3 262 PRINTS PR00412 Epoxide hydrolase signature 20 38 4.7E-5 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CVS42_RS07855 d2bacb286ca3d9b1caa9928154f677d3 262 PRINTS PR00412 Epoxide hydrolase signature 232 254 4.7E-5 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CVS42_RS07855 d2bacb286ca3d9b1caa9928154f677d3 262 Pfam PF12697 Alpha/beta hydrolase family 16 249 1.8E-22 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS07855 d2bacb286ca3d9b1caa9928154f677d3 262 Gene3D G3DSA:3.40.50.1820 3 260 1.6E-40 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS06935 223737f1309933feec0073e496c7522a 481 Gene3D G3DSA:3.40.309.10 243 436 6.0E-52 T 29-03-2018 CVS42_RS06935 223737f1309933feec0073e496c7522a 481 SUPERFAMILY SSF53720 24 477 1.57E-112 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CVS42_RS06935 223737f1309933feec0073e496c7522a 481 Gene3D G3DSA:3.40.605.10 17 242 4.5E-57 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS06935 223737f1309933feec0073e496c7522a 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 226 233 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CVS42_RS06935 223737f1309933feec0073e496c7522a 481 PIRSF PIRSF036492 5 481 2.2E-154 T 29-03-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 CVS42_RS06935 223737f1309933feec0073e496c7522a 481 Pfam PF00171 Aldehyde dehydrogenase family 38 451 1.0E-82 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS15075 15357643e13b9047b98f5e6560cf3b90 256 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 15 206 9.8E-96 T 29-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 CVS42_RS15075 15357643e13b9047b98f5e6560cf3b90 256 Gene3D G3DSA:2.10.70.20 161 210 2.4E-14 T 29-03-2018 CVS42_RS15075 15357643e13b9047b98f5e6560cf3b90 256 SUPERFAMILY SSF54523 17 56 1.0E-4 T 29-03-2018 CVS42_RS15075 15357643e13b9047b98f5e6560cf3b90 256 Gene3D G3DSA:3.10.610.10 47 157 9.7E-33 T 29-03-2018 CVS42_RS15075 15357643e13b9047b98f5e6560cf3b90 256 Pfam PF11612 Type II secretion system (T2SS), protein J 67 203 3.9E-40 T 29-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 CVS42_RS15075 15357643e13b9047b98f5e6560cf3b90 256 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS15075 15357643e13b9047b98f5e6560cf3b90 256 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 37 1.8E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS15075 15357643e13b9047b98f5e6560cf3b90 256 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 37 1.9E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS15075 15357643e13b9047b98f5e6560cf3b90 256 SUPERFAMILY SSF54523 48 205 1.05E-49 T 29-03-2018 CVS42_RS16585 2a17085866dbb923817d58a6daefcf40 163 SUPERFAMILY SSF64438 4 156 1.1E-39 T 29-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CVS42_RS16585 2a17085866dbb923817d58a6daefcf40 163 Pfam PF03975 CheD chemotactic sensory transduction 47 151 4.7E-22 T 29-03-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 CVS42_RS16585 2a17085866dbb923817d58a6daefcf40 163 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 1 156 21.541 T 29-03-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 CVS42_RS19120 5baf1c98dcacae83a4faeaa5f7333ed8 364 SUPERFAMILY SSF52540 59 198 5.59E-15 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS19120 5baf1c98dcacae83a4faeaa5f7333ed8 364 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 364 53.776 T 29-03-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 CVS42_RS19120 5baf1c98dcacae83a4faeaa5f7333ed8 364 Gene3D G3DSA:3.40.50.300 18 362 6.4E-13 T 29-03-2018 CVS42_RS19120 5baf1c98dcacae83a4faeaa5f7333ed8 364 Pfam PF03969 AFG1-like ATPase 1 360 2.4E-151 T 29-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 CVS42_RS08810 9255a6f0d2f60655edd3125a24bbc395 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 65 198 6.6E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS08810 9255a6f0d2f60655edd3125a24bbc395 226 Gene3D G3DSA:3.40.50.1000 88 225 2.4E-28 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS08810 9255a6f0d2f60655edd3125a24bbc395 226 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 6 222 7.4E-53 T 29-03-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 CVS42_RS08810 9255a6f0d2f60655edd3125a24bbc395 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 100 192 1.2E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS08810 9255a6f0d2f60655edd3125a24bbc395 226 SUPERFAMILY SSF56784 6 223 6.75E-44 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS08810 9255a6f0d2f60655edd3125a24bbc395 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 197 6.6E-20 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS08810 9255a6f0d2f60655edd3125a24bbc395 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 109 122 5.3E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS08810 9255a6f0d2f60655edd3125a24bbc395 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 187 200 5.3E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS08810 9255a6f0d2f60655edd3125a24bbc395 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 5.3E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS08810 9255a6f0d2f60655edd3125a24bbc395 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 140 156 5.3E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS08810 9255a6f0d2f60655edd3125a24bbc395 226 Gene3D G3DSA:1.10.150.240 20 87 1.1E-13 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CVS42_RS10925 06b7d90add8376c28d7aee1eb90457a7 198 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 29-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 CVS42_RS10925 06b7d90add8376c28d7aee1eb90457a7 198 Pfam PF01184 GPR1/FUN34/yaaH family 2 175 2.5E-39 T 29-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 CVS42_RS10290 6925a4848fb625a1966cf1453fe8b8e4 638 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 5 343 3.5E-110 T 29-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 CVS42_RS10290 6925a4848fb625a1966cf1453fe8b8e4 638 Gene3D G3DSA:3.40.50.300 199 347 3.6E-32 T 29-03-2018 CVS42_RS10290 6925a4848fb625a1966cf1453fe8b8e4 638 Pfam PF00270 DEAD/DEAH box helicase 17 177 3.6E-17 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CVS42_RS10290 6925a4848fb625a1966cf1453fe8b8e4 638 Gene3D G3DSA:3.40.50.300 2 197 3.5E-36 T 29-03-2018 CVS42_RS10290 6925a4848fb625a1966cf1453fe8b8e4 638 SMART SM00487 11 207 2.4E-29 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS10290 6925a4848fb625a1966cf1453fe8b8e4 638 Gene3D G3DSA:1.10.10.10 465 636 6.5E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS10290 6925a4848fb625a1966cf1453fe8b8e4 638 Pfam PF00271 Helicase conserved C-terminal domain 224 321 3.1E-17 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS10290 6925a4848fb625a1966cf1453fe8b8e4 638 Pfam PF16124 RecQ zinc-binding 509 555 8.6E-9 T 29-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CVS42_RS10290 6925a4848fb625a1966cf1453fe8b8e4 638 SUPERFAMILY SSF52540 56 337 2.3E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS10290 6925a4848fb625a1966cf1453fe8b8e4 638 SMART SM00490 241 322 1.2E-26 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS10290 6925a4848fb625a1966cf1453fe8b8e4 638 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 130 139 - T 29-03-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site CVS42_RS15475 0acc74817f5a5aedd952a16e7d470cda 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS15475 0acc74817f5a5aedd952a16e7d470cda 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 6.1E-53 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS15475 0acc74817f5a5aedd952a16e7d470cda 458 PRINTS PR00175 Sodium/alanine symporter signature 352 374 6.1E-53 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS15475 0acc74817f5a5aedd952a16e7d470cda 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 6.1E-53 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS15475 0acc74817f5a5aedd952a16e7d470cda 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 6.1E-53 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS15475 0acc74817f5a5aedd952a16e7d470cda 458 PRINTS PR00175 Sodium/alanine symporter signature 411 431 6.1E-53 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS15475 0acc74817f5a5aedd952a16e7d470cda 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 6.1E-53 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS15475 0acc74817f5a5aedd952a16e7d470cda 458 Pfam PF01235 Sodium:alanine symporter family 57 449 1.2E-144 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS15475 0acc74817f5a5aedd952a16e7d470cda 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 442 5.0E-161 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 Gene3D G3DSA:3.30.70.270 393 554 1.2E-62 T 29-03-2018 CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 Pfam PF08448 PAS fold 29 138 4.0E-17 T 29-03-2018 IPR013656 PAS fold-4 CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 SUPERFAMILY SSF55785 22 135 9.77E-16 T 29-03-2018 IPR000014 PAS domain CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 SUPERFAMILY SSF55785 273 383 1.71E-21 T 29-03-2018 IPR000014 PAS domain CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 Gene3D G3DSA:3.30.450.20 9 140 5.3E-21 T 29-03-2018 CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 SMART SM00267 376 548 1.9E-66 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 383 546 1.3E-44 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 Gene3D G3DSA:3.20.20.450 555 807 1.4E-96 T 29-03-2018 IPR001633 EAL domain CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 SMART SM00086 334 376 1.3 T 29-03-2018 IPR001610 PAC motif CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 SMART SM00086 95 137 0.0037 T 29-03-2018 IPR001610 PAC motif CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 267 383 2.5E-15 T 29-03-2018 IPR000014 PAS domain CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 144 6.9E-12 T 29-03-2018 IPR000014 PAS domain CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 SMART SM00052 558 803 1.1E-111 T 29-03-2018 IPR001633 EAL domain CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 SMART SM00091 262 328 1.3E-7 T 29-03-2018 IPR000014 PAS domain CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 SMART SM00091 142 210 14.0 T 29-03-2018 IPR000014 PAS domain CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 SMART SM00091 21 89 40.0 T 29-03-2018 IPR000014 PAS domain CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 Pfam PF13426 PAS domain 273 374 2.4E-10 T 29-03-2018 IPR000014 PAS domain CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 SUPERFAMILY SSF55073 392 549 9.42E-48 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 Pfam PF00990 Diguanylate cyclase, GGDEF domain 387 543 2.9E-49 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 Pfam PF00563 EAL domain 566 798 4.6E-73 T 29-03-2018 IPR001633 EAL domain CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 SUPERFAMILY SSF141868 563 808 4.18E-84 T 29-03-2018 IPR001633 EAL domain CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 Gene3D G3DSA:3.30.450.20 266 392 1.5E-20 T 29-03-2018 CVS42_RS16830 bdd6c681fe6fb64daedf011f806abb1c 815 Gene3D G3DSA:3.30.450.20 141 265 1.1E-11 T 29-03-2018 CVS42_RS21185 c08f2f61cc96448cf127a9eb85f6036c 298 SUPERFAMILY SSF103481 42 143 2.35E-13 T 29-03-2018 CVS42_RS21185 c08f2f61cc96448cf127a9eb85f6036c 298 SUPERFAMILY SSF103481 191 288 2.88E-8 T 29-03-2018 CVS42_RS21185 c08f2f61cc96448cf127a9eb85f6036c 298 Pfam PF00892 EamA-like transporter family 9 142 1.8E-16 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS21185 c08f2f61cc96448cf127a9eb85f6036c 298 TIGRFAM TIGR00688 rarD: protein RarD 8 261 3.9E-88 T 29-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 CVS42_RS19355 93876fa05fbf035a4311b0f05fde9205 349 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 23 344 6.0E-97 T 29-03-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX CVS42_RS19355 93876fa05fbf035a4311b0f05fde9205 349 Gene3D G3DSA:3.90.20.10 24 111 1.5E-4 T 29-03-2018 CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 SUPERFAMILY SSF56003 303 319 2.49E-167 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 SUPERFAMILY SSF56003 356 958 2.49E-167 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 Gene3D G3DSA:3.90.1170.50 181 299 4.0E-28 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 Pfam PF01799 [2Fe-2S] binding domain 74 146 5.6E-12 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 188 299 2.3E-28 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 TIGRFAM TIGR03313 Se_sel_red_Mo: probable selenate reductase, molybdenum-binding subunit 5 957 0.0 T 29-03-2018 IPR017699 Molybdenum-binding protein YgfN/XdhD CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 Gene3D G3DSA:1.10.150.120 74 180 2.5E-17 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 Gene3D G3DSA:3.30.365.10 797 962 5.7E-41 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 Gene3D G3DSA:3.30.365.10 366 471 2.0E-32 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 SMART SM01008 187 299 3.6E-37 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 Gene3D G3DSA:3.30.365.10 472 640 1.7E-39 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 SUPERFAMILY SSF54665 163 318 6.02E-46 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 SUPERFAMILY SSF47741 85 189 1.03E-18 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 Gene3D G3DSA:3.30.365.10 648 796 7.2E-35 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 PIRSF PIRSF000127 52 161 0.0022 T 29-03-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 PIRSF PIRSF000127 355 949 3.3E-72 T 29-03-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 PIRSF PIRSF000127 140 346 1.7E-15 T 29-03-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 CVS42_RS09320 037bd0e032f07982a5f60a684097438f 964 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 361 895 1.8E-150 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CVS42_RS09370 ec63cbf8ab2b9b0ba98e678b45cc5a9f 429 Gene3D G3DSA:3.30.70.270 255 427 1.3E-53 T 29-03-2018 CVS42_RS09370 ec63cbf8ab2b9b0ba98e678b45cc5a9f 429 Pfam PF00990 Diguanylate cyclase, GGDEF domain 267 422 3.3E-45 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS09370 ec63cbf8ab2b9b0ba98e678b45cc5a9f 429 SUPERFAMILY SSF55785 127 253 1.28E-22 T 29-03-2018 IPR000014 PAS domain CVS42_RS09370 ec63cbf8ab2b9b0ba98e678b45cc5a9f 429 Gene3D G3DSA:3.30.450.20 140 254 1.0E-20 T 29-03-2018 CVS42_RS09370 ec63cbf8ab2b9b0ba98e678b45cc5a9f 429 Pfam PF08448 PAS fold 150 257 8.1E-16 T 29-03-2018 IPR013656 PAS fold-4 CVS42_RS09370 ec63cbf8ab2b9b0ba98e678b45cc5a9f 429 Pfam PF08448 PAS fold 21 130 7.5E-20 T 29-03-2018 IPR013656 PAS fold-4 CVS42_RS09370 ec63cbf8ab2b9b0ba98e678b45cc5a9f 429 SUPERFAMILY SSF55073 271 426 1.33E-46 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS09370 ec63cbf8ab2b9b0ba98e678b45cc5a9f 429 SMART SM00267 255 427 1.5E-65 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS09370 ec63cbf8ab2b9b0ba98e678b45cc5a9f 429 SMART SM00091 15 81 4.7E-9 T 29-03-2018 IPR000014 PAS domain CVS42_RS09370 ec63cbf8ab2b9b0ba98e678b45cc5a9f 429 SMART SM00091 142 208 9.9E-6 T 29-03-2018 IPR000014 PAS domain CVS42_RS09370 ec63cbf8ab2b9b0ba98e678b45cc5a9f 429 SUPERFAMILY SSF55785 9 128 7.85E-22 T 29-03-2018 IPR000014 PAS domain CVS42_RS09370 ec63cbf8ab2b9b0ba98e678b45cc5a9f 429 Gene3D G3DSA:3.30.450.20 7 139 3.1E-26 T 29-03-2018 CVS42_RS09370 ec63cbf8ab2b9b0ba98e678b45cc5a9f 429 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 262 2.8E-12 T 29-03-2018 IPR000014 PAS domain CVS42_RS09370 ec63cbf8ab2b9b0ba98e678b45cc5a9f 429 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 136 1.5E-16 T 29-03-2018 IPR000014 PAS domain CVS42_RS09370 ec63cbf8ab2b9b0ba98e678b45cc5a9f 429 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 262 426 7.4E-49 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS18920 043d55a761a1f520fb932fcf67520c22 447 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 446 1.2E-95 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CVS42_RS18920 043d55a761a1f520fb932fcf67520c22 447 SUPERFAMILY SSF64518 162 447 7.32E-22 T 29-03-2018 CVS42_RS18920 043d55a761a1f520fb932fcf67520c22 447 Gene3D G3DSA:3.90.20.10 84 218 3.0E-4 T 29-03-2018 CVS42_RS18920 043d55a761a1f520fb932fcf67520c22 447 Pfam PF00460 Flagella basal body rod protein 4 33 1.6E-6 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CVS42_RS18920 043d55a761a1f520fb932fcf67520c22 447 PRINTS PR01005 Flagellar hook-associated protein signature 211 229 1.9E-17 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CVS42_RS18920 043d55a761a1f520fb932fcf67520c22 447 PRINTS PR01005 Flagellar hook-associated protein signature 153 177 1.9E-17 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CVS42_RS18920 043d55a761a1f520fb932fcf67520c22 447 PRINTS PR01005 Flagellar hook-associated protein signature 120 140 1.9E-17 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CVS42_RS18920 043d55a761a1f520fb932fcf67520c22 447 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 1.9E-17 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CVS42_RS18920 043d55a761a1f520fb932fcf67520c22 447 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 383 446 8.7E-10 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CVS42_RS05295 dc252bd55a7364263f4bce0f3c8ce35a 280 Pfam PF12849 PBP superfamily domain 38 256 5.4E-29 T 29-03-2018 IPR024370 PBP domain CVS42_RS05295 dc252bd55a7364263f4bce0f3c8ce35a 280 Gene3D G3DSA:3.40.190.10 129 213 1.2E-44 T 29-03-2018 CVS42_RS05295 dc252bd55a7364263f4bce0f3c8ce35a 280 Gene3D G3DSA:3.40.190.10 214 280 2.7E-24 T 29-03-2018 CVS42_RS05295 dc252bd55a7364263f4bce0f3c8ce35a 280 SUPERFAMILY SSF53850 38 265 4.53E-30 T 29-03-2018 CVS42_RS05295 dc252bd55a7364263f4bce0f3c8ce35a 280 Gene3D G3DSA:3.40.190.10 28 128 5.8E-4 T 29-03-2018 CVS42_RS04590 b837ace82f6a8addb3a84a1ffdf04ca4 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 475 1.4E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS04590 b837ace82f6a8addb3a84a1ffdf04ca4 478 Gene3D G3DSA:1.10.287.130 248 319 7.7E-9 T 29-03-2018 CVS42_RS04590 b837ace82f6a8addb3a84a1ffdf04ca4 478 SUPERFAMILY SSF47384 241 323 1.37E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS04590 b837ace82f6a8addb3a84a1ffdf04ca4 478 Pfam PF08521 Two-component sensor kinase N-terminal 22 180 3.3E-8 T 29-03-2018 IPR013727 Two-component sensor kinase, N-terminal CVS42_RS04590 b837ace82f6a8addb3a84a1ffdf04ca4 478 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 322 9.2E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS04590 b837ace82f6a8addb3a84a1ffdf04ca4 478 SMART SM00388 258 323 8.1E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS04590 b837ace82f6a8addb3a84a1ffdf04ca4 478 SMART SM00387 367 476 8.5E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS04590 b837ace82f6a8addb3a84a1ffdf04ca4 478 Gene3D G3DSA:1.20.5.1040 161 205 7.9E-9 T 29-03-2018 CVS42_RS04590 b837ace82f6a8addb3a84a1ffdf04ca4 478 Gene3D G3DSA:1.20.5.1040 5 58 7.2E-9 T 29-03-2018 CVS42_RS04590 b837ace82f6a8addb3a84a1ffdf04ca4 478 Gene3D G3DSA:3.30.565.10 328 478 1.2E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS04590 b837ace82f6a8addb3a84a1ffdf04ca4 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 473 8.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS04590 b837ace82f6a8addb3a84a1ffdf04ca4 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 8.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS04590 b837ace82f6a8addb3a84a1ffdf04ca4 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 432 8.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS04590 b837ace82f6a8addb3a84a1ffdf04ca4 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 418 8.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS04590 b837ace82f6a8addb3a84a1ffdf04ca4 478 SUPERFAMILY SSF55874 313 474 1.83E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS17470 aa6daa52b1d8354270add483c4471cd2 334 SUPERFAMILY SSF111369 44 130 3.66E-5 T 29-03-2018 CVS42_RS17470 aa6daa52b1d8354270add483c4471cd2 334 Gene3D G3DSA:2.40.50.100 51 148 1.1E-8 T 29-03-2018 CVS42_RS17470 aa6daa52b1d8354270add483c4471cd2 334 Pfam PF13533 Biotin-lipoyl like 54 98 1.1E-8 T 29-03-2018 CVS42_RS17470 aa6daa52b1d8354270add483c4471cd2 334 Gene3D G3DSA:2.40.50.100 164 243 3.2E-5 T 29-03-2018 CVS42_RS17470 aa6daa52b1d8354270add483c4471cd2 334 Pfam PF13437 HlyD family secretion protein 215 291 3.1E-5 T 29-03-2018 CVS42_RS01010 7fab875ef73c3b3a1e78eaf4830be361 334 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 5 325 37.323 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CVS42_RS01010 7fab875ef73c3b3a1e78eaf4830be361 334 Gene3D G3DSA:1.10.1040.10 192 334 2.4E-51 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CVS42_RS01010 7fab875ef73c3b3a1e78eaf4830be361 334 Gene3D G3DSA:3.40.50.720 3 181 4.6E-36 T 29-03-2018 CVS42_RS01010 7fab875ef73c3b3a1e78eaf4830be361 334 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CVS42_RS01010 7fab875ef73c3b3a1e78eaf4830be361 334 SUPERFAMILY SSF48179 183 334 7.99E-55 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CVS42_RS01010 7fab875ef73c3b3a1e78eaf4830be361 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 59 86 2.2E-44 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CVS42_RS01010 7fab875ef73c3b3a1e78eaf4830be361 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 135 155 2.2E-44 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CVS42_RS01010 7fab875ef73c3b3a1e78eaf4830be361 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 9 26 2.2E-44 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CVS42_RS01010 7fab875ef73c3b3a1e78eaf4830be361 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 2.2E-44 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CVS42_RS01010 7fab875ef73c3b3a1e78eaf4830be361 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 2.2E-44 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CVS42_RS01010 7fab875ef73c3b3a1e78eaf4830be361 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 2.2E-44 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CVS42_RS01010 7fab875ef73c3b3a1e78eaf4830be361 334 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 322 2.3E-50 T 29-03-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CVS42_RS01010 7fab875ef73c3b3a1e78eaf4830be361 334 SUPERFAMILY SSF51735 6 181 1.44E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS01010 7fab875ef73c3b3a1e78eaf4830be361 334 PIRSF PIRSF000114 1 334 1.3E-97 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CVS42_RS01010 7fab875ef73c3b3a1e78eaf4830be361 334 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 162 2.1E-47 T 29-03-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CVS42_RS03615 25df02ca8d7cefa70df4655b8011d9f8 460 SUPERFAMILY SSF47384 248 312 5.1E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS03615 25df02ca8d7cefa70df4655b8011d9f8 460 Gene3D G3DSA:3.30.565.10 305 460 1.8E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS03615 25df02ca8d7cefa70df4655b8011d9f8 460 SUPERFAMILY SSF55874 345 454 7.17E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS03615 25df02ca8d7cefa70df4655b8011d9f8 460 Gene3D G3DSA:1.10.287.130 251 304 2.1E-4 T 29-03-2018 CVS42_RS03615 25df02ca8d7cefa70df4655b8011d9f8 460 SMART SM00387 356 454 3.4E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS03615 25df02ca8d7cefa70df4655b8011d9f8 460 Pfam PF11884 Domain of unknown function (DUF3404) 43 250 4.6E-29 T 29-03-2018 IPR021821 Protein of unknown function DUF3404 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 Gene3D G3DSA:3.40.50.140 1 166 5.4E-48 T 29-03-2018 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 SUPERFAMILY SSF57783 747 810 1.7E-19 T 29-03-2018 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 Gene3D G3DSA:2.70.20.10 350 476 6.7E-37 T 29-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 SMART SM00436 136 224 3.1E-49 T 29-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 638 7.3E-245 T 29-03-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 SUPERFAMILY SSF57783 813 865 3.4E-20 T 29-03-2018 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 712 748 4.7E-10 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 600 625 1.6E-5 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 Gene3D G3DSA:1.10.460.10 167 349 4.5E-44 T 29-03-2018 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 726 54.229 T 29-03-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 SMART SM00437 275 530 2.2E-115 T 29-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 SUPERFAMILY SSF56712 3 612 9.55E-197 T 29-03-2018 IPR023405 DNA topoisomerase, type IA, core domain CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 7.8E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 493 507 7.8E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 393 409 7.8E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 317 326 7.8E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 109 122 7.8E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 SMART SM00493 3 135 6.9E-29 T 29-03-2018 IPR006171 TOPRIM domain CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 Pfam PF01131 DNA topoisomerase 160 568 3.0E-122 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 Gene3D G3DSA:2.20.25.10 812 866 1.8E-28 T 29-03-2018 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 Pfam PF08272 Topoisomerase I zinc-ribbon-like 827 865 2.5E-21 T 29-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 Pfam PF08272 Topoisomerase I zinc-ribbon-like 761 796 1.6E-12 T 29-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 Gene3D G3DSA:3.30.65.10 698 748 3.9E-9 T 29-03-2018 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 Gene3D G3DSA:3.30.65.10 579 651 5.3E-11 T 29-03-2018 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 Gene3D G3DSA:3.30.65.10 749 810 7.1E-11 T 29-03-2018 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 Pfam PF01751 Toprim domain 5 145 2.3E-32 T 29-03-2018 IPR006171 TOPRIM domain CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 312 326 - T 29-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CVS42_RS05145 fafeaf18a934f29639e4a4780171876f 873 SUPERFAMILY SSF57783 702 746 9.01E-7 T 29-03-2018 CVS42_RS12285 30f3e27ad4a3c028bfe92356d2dab9bd 334 Pfam PF14351 Domain of unknown function (DUF4401) 27 326 6.4E-62 T 29-03-2018 IPR025513 Domain of unknown function DUF4401 CVS42_RS08640 246c1b9fcc1d41a3134ac66ec93c29ed 339 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 10 336 3.7E-147 T 29-03-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative CVS42_RS08640 246c1b9fcc1d41a3134ac66ec93c29ed 339 Gene3D G3DSA:3.40.190.10 12 141 3.1E-13 T 29-03-2018 CVS42_RS08640 246c1b9fcc1d41a3134ac66ec93c29ed 339 PIRSF PIRSF002825 1 332 1.1E-85 T 29-03-2018 IPR026045 Ferric binding protein CVS42_RS08640 246c1b9fcc1d41a3134ac66ec93c29ed 339 SUPERFAMILY SSF53850 25 327 4.45E-69 T 29-03-2018 CVS42_RS08640 246c1b9fcc1d41a3134ac66ec93c29ed 339 Pfam PF13343 Bacterial extracellular solute-binding protein 74 316 1.6E-30 T 29-03-2018 CVS42_RS08640 246c1b9fcc1d41a3134ac66ec93c29ed 339 Gene3D G3DSA:3.40.190.10 142 280 8.8E-33 T 29-03-2018 CVS42_RS07280 552409e6012909d40e5c6b8b7ae38dad 616 Pfam PF00884 Sulfatase 260 529 2.5E-27 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CVS42_RS07280 552409e6012909d40e5c6b8b7ae38dad 616 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 2.7E-100 T 29-03-2018 IPR024588 Inner membrane protein YejM, N-terminal CVS42_RS07280 552409e6012909d40e5c6b8b7ae38dad 616 SUPERFAMILY SSF53649 260 588 2.62E-49 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CVS42_RS07280 552409e6012909d40e5c6b8b7ae38dad 616 Gene3D G3DSA:3.40.720.10 251 540 5.3E-35 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CVS42_RS07280 552409e6012909d40e5c6b8b7ae38dad 616 PIRSF PIRSF004950 6 615 8.4E-205 T 29-03-2018 IPR012159 Inner membrane protein YejM CVS42_RS00280 b7512f8392e18b0fec9c039553cafd97 268 Gene3D G3DSA:3.30.450.20 1 103 8.7E-9 T 29-03-2018 CVS42_RS00280 b7512f8392e18b0fec9c039553cafd97 268 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 115 249 1.2E-19 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS00280 b7512f8392e18b0fec9c039553cafd97 268 Pfam PF00990 Diguanylate cyclase, GGDEF domain 118 263 3.4E-21 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS00280 b7512f8392e18b0fec9c039553cafd97 268 Gene3D G3DSA:3.30.70.270 104 267 8.2E-29 T 29-03-2018 CVS42_RS00280 b7512f8392e18b0fec9c039553cafd97 268 SUPERFAMILY SSF55785 8 99 7.15E-7 T 29-03-2018 IPR000014 PAS domain CVS42_RS00280 b7512f8392e18b0fec9c039553cafd97 268 Pfam PF08447 PAS fold 24 91 8.5E-9 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CVS42_RS00280 b7512f8392e18b0fec9c039553cafd97 268 SMART SM00267 105 268 2.0E-12 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS00280 b7512f8392e18b0fec9c039553cafd97 268 SUPERFAMILY SSF55073 121 264 4.87E-22 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 26 1115 29.227 T 29-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 153 1089 0.0 T 29-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 SUPERFAMILY SSF141259 480 551 2.09E-22 T 29-03-2018 IPR003711 CarD-like/TRCF domain CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 Pfam PF00270 DEAD/DEAH box helicase 613 773 2.5E-19 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 SUPERFAMILY SSF52540 534 791 8.28E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 SMART SM00487 608 798 4.8E-33 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 SUPERFAMILY SSF52540 357 475 3.13E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 Gene3D G3DSA:3.40.50.300 457 800 2.8E-40 T 29-03-2018 CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 Pfam PF02559 CarD-like/TRCF domain 490 583 3.0E-24 T 29-03-2018 IPR003711 CarD-like/TRCF domain CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 SMART SM01058 489 584 1.4E-49 T 29-03-2018 IPR003711 CarD-like/TRCF domain CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 SMART SM00982 1016 1116 1.2E-46 T 29-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 Pfam PF00271 Helicase conserved C-terminal domain 814 917 1.0E-15 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 Gene3D G3DSA:3.40.50.300 801 964 9.1E-25 T 29-03-2018 CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 SUPERFAMILY SSF143517 1002 1155 3.66E-42 T 29-03-2018 CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 SUPERFAMILY SSF52540 10 346 1.42E-99 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 SMART SM00490 834 918 1.6E-17 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 SUPERFAMILY SSF52540 790 998 2.0E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11445 85c77edd47f82e4a7443d2cc7a4beca6 1158 Pfam PF03461 TRCF domain 1017 1109 6.0E-27 T 29-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CVS42_RS20055 adb15a7b3f916f65798a10db9da081e2 141 Pfam PF13673 Acetyltransferase (GNAT) domain 39 124 6.5E-10 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS20055 adb15a7b3f916f65798a10db9da081e2 141 SUPERFAMILY SSF55729 31 139 2.7E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS20055 adb15a7b3f916f65798a10db9da081e2 141 Gene3D G3DSA:3.40.630.30 38 140 4.2E-17 T 29-03-2018 CVS42_RS16860 af9381ab06750f959c201fc342f6bb87 87 Pfam PF06196 Protein of unknown function (DUF997) 7 76 1.0E-21 T 29-03-2018 IPR010398 Protein of unknown function DUF997 CVS42_RS16860 af9381ab06750f959c201fc342f6bb87 87 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 2 77 2.0E-6 T 29-03-2018 IPR010398 Protein of unknown function DUF997 CVS42_RS06655 9417b6cc79c9964802756d4fa88a213e 282 SUPERFAMILY SSF48452 206 278 6.27E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS06655 9417b6cc79c9964802756d4fa88a213e 282 SUPERFAMILY SSF48452 112 171 6.27E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS06655 9417b6cc79c9964802756d4fa88a213e 282 Gene3D G3DSA:3.40.30.10 1 120 5.8E-17 T 29-03-2018 CVS42_RS06655 9417b6cc79c9964802756d4fa88a213e 282 Pfam PF14559 Tetratricopeptide repeat 125 188 1.7E-8 T 29-03-2018 CVS42_RS06655 9417b6cc79c9964802756d4fa88a213e 282 Gene3D G3DSA:1.25.40.10 121 207 1.5E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS06655 9417b6cc79c9964802756d4fa88a213e 282 Pfam PF14561 Tetratricopeptide repeat 196 282 6.6E-25 T 29-03-2018 CVS42_RS06655 9417b6cc79c9964802756d4fa88a213e 282 Pfam PF00085 Thioredoxin 3 106 1.2E-12 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 CVS42_RS06655 9417b6cc79c9964802756d4fa88a213e 282 SUPERFAMILY SSF52833 2 111 4.23E-17 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS06655 9417b6cc79c9964802756d4fa88a213e 282 Gene3D G3DSA:1.25.40.10 208 282 2.6E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS09400 505f44b1b900395147e1c979c4003ecf 369 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 369 34.209 T 29-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CVS42_RS09400 505f44b1b900395147e1c979c4003ecf 369 Gene3D G3DSA:3.30.230.40 170 253 9.9E-37 T 29-03-2018 CVS42_RS09400 505f44b1b900395147e1c979c4003ecf 369 Gene3D G3DSA:3.40.50.1000 5 169 3.2E-21 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS09400 505f44b1b900395147e1c979c4003ecf 369 SUPERFAMILY SSF54211 167 251 2.02E-32 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS09400 505f44b1b900395147e1c979c4003ecf 369 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 29-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CVS42_RS09400 505f44b1b900395147e1c979c4003ecf 369 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 144 1.9E-43 T 29-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CVS42_RS09400 505f44b1b900395147e1c979c4003ecf 369 Pfam PF13242 HAD-hyrolase-like 103 146 3.2E-5 T 29-03-2018 CVS42_RS09400 505f44b1b900395147e1c979c4003ecf 369 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 369 49.493 T 29-03-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 CVS42_RS09400 505f44b1b900395147e1c979c4003ecf 369 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 148 5.4E-26 T 29-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CVS42_RS09400 505f44b1b900395147e1c979c4003ecf 369 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 351 2.6E-62 T 29-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CVS42_RS09400 505f44b1b900395147e1c979c4003ecf 369 SUPERFAMILY SSF54211 272 355 2.15E-21 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS09400 505f44b1b900395147e1c979c4003ecf 369 Gene3D G3DSA:3.30.230.40 255 369 1.7E-26 T 29-03-2018 CVS42_RS09400 505f44b1b900395147e1c979c4003ecf 369 SUPERFAMILY SSF56784 1 158 1.35E-37 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS09400 505f44b1b900395147e1c979c4003ecf 369 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 4 162 7.4E-69 T 29-03-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 CVS42_RS06360 469eab2b18725602c4965aa1beabee54 212 SUPERFAMILY SSF52172 4 135 1.05E-33 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS06360 469eab2b18725602c4965aa1beabee54 212 Pfam PF00072 Response regulator receiver domain 8 119 4.9E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06360 469eab2b18725602c4965aa1beabee54 212 SUPERFAMILY SSF46894 141 209 8.16E-21 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS06360 469eab2b18725602c4965aa1beabee54 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 206 1.9E-22 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS06360 469eab2b18725602c4965aa1beabee54 212 SMART SM00448 6 119 3.1E-34 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06360 469eab2b18725602c4965aa1beabee54 212 Gene3D G3DSA:1.10.10.10 128 211 6.3E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS06360 469eab2b18725602c4965aa1beabee54 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS06360 469eab2b18725602c4965aa1beabee54 212 Gene3D G3DSA:3.40.50.2300 5 127 2.3E-35 T 29-03-2018 CVS42_RS06360 469eab2b18725602c4965aa1beabee54 212 SMART SM00421 150 207 1.4E-23 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS06360 469eab2b18725602c4965aa1beabee54 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 3.3E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS06360 469eab2b18725602c4965aa1beabee54 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 3.3E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS06360 469eab2b18725602c4965aa1beabee54 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 3.3E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 118 354 1.8E-14 T 29-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 PRINTS PR01182 Ornithine decarboxylase signature 124 146 2.4E-21 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 PRINTS PR01182 Ornithine decarboxylase signature 341 354 2.4E-21 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 PRINTS PR01182 Ornithine decarboxylase signature 24 48 2.4E-21 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 PRINTS PR01182 Ornithine decarboxylase signature 321 331 2.4E-21 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 PRINTS PR01182 Ornithine decarboxylase signature 50 77 2.4E-21 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 PRINTS PR01182 Ornithine decarboxylase signature 94 118 2.4E-21 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 PRINTS PR01182 Ornithine decarboxylase signature 290 303 2.4E-21 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 208 225 - T 29-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 SUPERFAMILY SSF50621 249 379 3.56E-33 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 Gene3D G3DSA:2.40.37.10 256 385 4.4E-34 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 72 84 5.2E-20 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 52 70 5.2E-20 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 174 187 5.2E-20 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 255 274 5.2E-20 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 354 367 5.2E-20 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 Gene3D G3DSA:3.20.20.10 31 255 3.5E-49 T 29-03-2018 IPR029066 PLP-binding barrel CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 SUPERFAMILY SSF51419 30 267 1.57E-60 T 29-03-2018 IPR029066 PLP-binding barrel CVS42_RS15480 c8cd932bb3d0f41e53292b862a243dbf 388 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 32 265 1.7E-49 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CVS42_RS16400 898a3a58e755f4decc38738e30d38143 206 Gene3D G3DSA:3.40.50.10070 56 186 3.9E-6 T 29-03-2018 CVS42_RS16400 898a3a58e755f4decc38738e30d38143 206 PIRSF PIRSF028688 1 200 3.2E-45 T 29-03-2018 IPR014549 Flagellar protein FlgO CVS42_RS19975 c95a9107064abf3b36adfecae2f74fea 170 SUPERFAMILY SSF55174 46 144 7.07E-30 T 29-03-2018 CVS42_RS19975 c95a9107064abf3b36adfecae2f74fea 170 SMART SM00363 49 114 1.0E-8 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS19975 c95a9107064abf3b36adfecae2f74fea 170 Pfam PF01479 S4 domain 49 95 9.4E-13 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS19975 c95a9107064abf3b36adfecae2f74fea 170 PIRSF PIRSF016821 46 170 6.4E-42 T 29-03-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 CVS42_RS19975 c95a9107064abf3b36adfecae2f74fea 170 Gene3D G3DSA:3.10.290.10 42 145 2.0E-26 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS02415 b8339830184c2676f7bb56f503cd8957 321 SMART SM00267 149 319 7.8E-49 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS02415 b8339830184c2676f7bb56f503cd8957 321 Gene3D G3DSA:3.30.70.270 143 319 5.8E-48 T 29-03-2018 CVS42_RS02415 b8339830184c2676f7bb56f503cd8957 321 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 158 317 1.5E-35 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS02415 b8339830184c2676f7bb56f503cd8957 321 Pfam PF00990 Diguanylate cyclase, GGDEF domain 160 315 8.4E-39 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS02415 b8339830184c2676f7bb56f503cd8957 321 SUPERFAMILY SSF55073 165 317 7.77E-41 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS14765 5c3da39438ae240cd1f3a66b7c637002 354 Pfam PF01758 Sodium Bile acid symporter family 59 253 2.0E-37 T 29-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CVS42_RS14765 5c3da39438ae240cd1f3a66b7c637002 354 PIRSF PIRSF005508 1 352 6.1E-117 T 29-03-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CVS42_RS14765 5c3da39438ae240cd1f3a66b7c637002 354 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 14 340 5.6E-121 T 29-03-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CVS42_RS11485 7c7d51613826b47a801d899669a7f395 456 SUPERFAMILY SSF52058 12 191 1.19E-34 T 29-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like CVS42_RS11485 7c7d51613826b47a801d899669a7f395 456 Gene3D G3DSA:3.30.200.20 197 338 8.0E-11 T 29-03-2018 CVS42_RS11485 7c7d51613826b47a801d899669a7f395 456 Pfam PF13855 Leucine rich repeat 105 162 7.6E-8 T 29-03-2018 IPR001611 Leucine-rich repeat GO:0005515 CVS42_RS11485 7c7d51613826b47a801d899669a7f395 456 SUPERFAMILY SSF56112 208 447 6.56E-24 T 29-03-2018 IPR011009 Protein kinase-like domain CVS42_RS11485 7c7d51613826b47a801d899669a7f395 456 SMART SM00369 34 57 24.0 T 29-03-2018 IPR003591 Leucine-rich repeat, typical subtype CVS42_RS11485 7c7d51613826b47a801d899669a7f395 456 SMART SM00369 58 81 83.0 T 29-03-2018 IPR003591 Leucine-rich repeat, typical subtype CVS42_RS11485 7c7d51613826b47a801d899669a7f395 456 SMART SM00369 102 126 17.0 T 29-03-2018 IPR003591 Leucine-rich repeat, typical subtype CVS42_RS11485 7c7d51613826b47a801d899669a7f395 456 SMART SM00369 128 149 43.0 T 29-03-2018 IPR003591 Leucine-rich repeat, typical subtype CVS42_RS11485 7c7d51613826b47a801d899669a7f395 456 SMART SM00364 58 77 130.0 T 29-03-2018 CVS42_RS11485 7c7d51613826b47a801d899669a7f395 456 SMART SM00364 149 168 370.0 T 29-03-2018 CVS42_RS11485 7c7d51613826b47a801d899669a7f395 456 SMART SM00364 126 145 81.0 T 29-03-2018 CVS42_RS11485 7c7d51613826b47a801d899669a7f395 456 SMART SM00364 35 54 56.0 T 29-03-2018 CVS42_RS11485 7c7d51613826b47a801d899669a7f395 456 SMART SM00364 103 122 37.0 T 29-03-2018 CVS42_RS11485 7c7d51613826b47a801d899669a7f395 456 Gene3D G3DSA:1.10.510.10 339 408 5.8E-8 T 29-03-2018 CVS42_RS11485 7c7d51613826b47a801d899669a7f395 456 Pfam PF07714 Protein tyrosine kinase 208 387 9.6E-11 T 29-03-2018 IPR001245 Serine-threonine/tyrosine-protein kinase, catalytic domain GO:0004672|GO:0006468 CVS42_RS11485 7c7d51613826b47a801d899669a7f395 456 Gene3D G3DSA:3.80.10.10 2 196 1.3E-36 T 29-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like CVS42_RS12070 c03aa3e7c2687f5a3006e75fb2de772e 712 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 31 709 3.5E-108 T 29-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 CVS42_RS12070 c03aa3e7c2687f5a3006e75fb2de772e 712 Gene3D G3DSA:2.40.170.20 150 709 1.8E-64 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS12070 c03aa3e7c2687f5a3006e75fb2de772e 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 153 3.2E-24 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS12070 c03aa3e7c2687f5a3006e75fb2de772e 712 Gene3D G3DSA:2.170.130.10 24 149 2.2E-30 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS12070 c03aa3e7c2687f5a3006e75fb2de772e 712 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 38 - T 29-03-2018 IPR010916 TonB box, conserved site CVS42_RS12070 c03aa3e7c2687f5a3006e75fb2de772e 712 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 31 709 3.2E-105 T 29-03-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 CVS42_RS12070 c03aa3e7c2687f5a3006e75fb2de772e 712 Pfam PF00593 TonB dependent receptor 231 708 5.6E-48 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS12070 c03aa3e7c2687f5a3006e75fb2de772e 712 SUPERFAMILY SSF56935 24 709 8.7E-107 T 29-03-2018 CVS42_RS00330 91ee28184d08bf8f03cdab8efd390b56 395 Gene3D G3DSA:3.50.50.60 2 197 1.5E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS00330 91ee28184d08bf8f03cdab8efd390b56 395 Gene3D G3DSA:2.40.30.10 198 270 4.1E-23 T 29-03-2018 CVS42_RS00330 91ee28184d08bf8f03cdab8efd390b56 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 2.2E-8 T 29-03-2018 CVS42_RS00330 91ee28184d08bf8f03cdab8efd390b56 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 2.2E-8 T 29-03-2018 CVS42_RS00330 91ee28184d08bf8f03cdab8efd390b56 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.2E-8 T 29-03-2018 CVS42_RS00330 91ee28184d08bf8f03cdab8efd390b56 395 Gene3D G3DSA:1.10.8.260 271 322 1.1E-13 T 29-03-2018 IPR023166 HI0933 insert-like domain CVS42_RS00330 91ee28184d08bf8f03cdab8efd390b56 395 SUPERFAMILY SSF51905 1 189 1.63E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS00330 91ee28184d08bf8f03cdab8efd390b56 395 SUPERFAMILY SSF51905 338 394 1.63E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS00330 91ee28184d08bf8f03cdab8efd390b56 395 Pfam PF03486 HI0933-like protein 6 393 8.3E-152 T 29-03-2018 CVS42_RS00330 91ee28184d08bf8f03cdab8efd390b56 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 393 2.9E-128 T 29-03-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CVS42_RS00330 91ee28184d08bf8f03cdab8efd390b56 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 370 1.0E-5 T 29-03-2018 CVS42_RS00330 91ee28184d08bf8f03cdab8efd390b56 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.0E-5 T 29-03-2018 CVS42_RS00330 91ee28184d08bf8f03cdab8efd390b56 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.0E-5 T 29-03-2018 CVS42_RS00330 91ee28184d08bf8f03cdab8efd390b56 395 SUPERFAMILY SSF160996 191 339 3.53E-40 T 29-03-2018 CVS42_RS20620 56f5d8b7c35f763e9d33a3413f2d8048 126 SUPERFAMILY SSF55298 1 126 1.34E-48 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CVS42_RS20620 56f5d8b7c35f763e9d33a3413f2d8048 126 Pfam PF01042 Endoribonuclease L-PSP 9 125 3.2E-44 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CVS42_RS20620 56f5d8b7c35f763e9d33a3413f2d8048 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 125 4.5E-55 T 29-03-2018 IPR006056 RidA family CVS42_RS20620 56f5d8b7c35f763e9d33a3413f2d8048 126 Gene3D G3DSA:3.30.1330.40 1 126 6.5E-50 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CVS42_RS11920 6654c4e71182efa62dec1309d3be1385 407 SUPERFAMILY SSF103473 6 392 6.15E-55 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS11920 6654c4e71182efa62dec1309d3be1385 407 Gene3D G3DSA:1.20.1250.20 204 397 3.5E-15 T 29-03-2018 CVS42_RS11920 6654c4e71182efa62dec1309d3be1385 407 Pfam PF07690 Major Facilitator Superfamily 16 353 3.2E-38 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS11920 6654c4e71182efa62dec1309d3be1385 407 Gene3D G3DSA:1.20.1250.20 4 197 6.5E-28 T 29-03-2018 CVS42_RS18670 86df28788f4ffb0ab0803c321044ddaf 818 Pfam PF00696 Amino acid kinase family 20 289 2.6E-42 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS18670 86df28788f4ffb0ab0803c321044ddaf 818 Gene3D G3DSA:3.40.50.720 463 637 9.5E-20 T 29-03-2018 CVS42_RS18670 86df28788f4ffb0ab0803c321044ddaf 818 ProSitePatterns PS00324 Aspartokinase signature. 22 30 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS18670 86df28788f4ffb0ab0803c321044ddaf 818 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 22 463 4.7E-64 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS18670 86df28788f4ffb0ab0803c321044ddaf 818 SUPERFAMILY SSF55347 616 799 9.81E-45 T 29-03-2018 CVS42_RS18670 86df28788f4ffb0ab0803c321044ddaf 818 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 475 607 2.0E-10 T 29-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CVS42_RS18670 86df28788f4ffb0ab0803c321044ddaf 818 Pfam PF00742 Homoserine dehydrogenase 616 811 3.5E-44 T 29-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CVS42_RS18670 86df28788f4ffb0ab0803c321044ddaf 818 SUPERFAMILY SSF53633 19 306 4.45E-61 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS18670 86df28788f4ffb0ab0803c321044ddaf 818 Gene3D G3DSA:3.30.360.10 638 795 4.3E-55 T 29-03-2018 CVS42_RS18670 86df28788f4ffb0ab0803c321044ddaf 818 Gene3D G3DSA:3.40.1160.10 17 309 1.2E-52 T 29-03-2018 CVS42_RS18670 86df28788f4ffb0ab0803c321044ddaf 818 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 662 684 - T 29-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CVS42_RS18670 86df28788f4ffb0ab0803c321044ddaf 818 PIRSF PIRSF000727 20 818 3.8E-243 T 29-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS18670 86df28788f4ffb0ab0803c321044ddaf 818 SUPERFAMILY SSF51735 468 638 1.77E-20 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS19870 3f6580dd1b08a00097838dd5c7273f91 659 SMART SM00283 397 658 2.1E-75 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS19870 3f6580dd1b08a00097838dd5c7273f91 659 Gene3D G3DSA:1.20.120.570 30 145 0.14 T 29-03-2018 CVS42_RS19870 3f6580dd1b08a00097838dd5c7273f91 659 SMART SM00304 330 382 0.0082 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS19870 3f6580dd1b08a00097838dd5c7273f91 659 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 131 1.9E-12 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CVS42_RS19870 3f6580dd1b08a00097838dd5c7273f91 659 Gene3D G3DSA:1.10.287.950 326 432 3.8E-5 T 29-03-2018 CVS42_RS19870 3f6580dd1b08a00097838dd5c7273f91 659 Gene3D G3DSA:1.10.287.950 433 659 8.9E-48 T 29-03-2018 CVS42_RS19870 3f6580dd1b08a00097838dd5c7273f91 659 SUPERFAMILY SSF58104 350 659 6.67E-71 T 29-03-2018 CVS42_RS19870 3f6580dd1b08a00097838dd5c7273f91 659 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 445 625 4.3E-42 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS07575 3d58a77f59c12b70619608856c99eab2 315 Pfam PF07549 SecD/SecF GG Motif 33 60 4.0E-11 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CVS42_RS07575 3d58a77f59c12b70619608856c99eab2 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 295 28.041 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CVS42_RS07575 3d58a77f59c12b70619608856c99eab2 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 114 281 2.5E-53 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CVS42_RS07575 3d58a77f59c12b70619608856c99eab2 315 Gene3D G3DSA:1.20.1640.10 89 305 5.9E-33 T 29-03-2018 CVS42_RS07575 3d58a77f59c12b70619608856c99eab2 315 PRINTS PR01755 Bacterial translocase SecF protein signature 152 166 2.5E-31 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CVS42_RS07575 3d58a77f59c12b70619608856c99eab2 315 PRINTS PR01755 Bacterial translocase SecF protein signature 232 247 2.5E-31 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CVS42_RS07575 3d58a77f59c12b70619608856c99eab2 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 2.5E-31 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CVS42_RS07575 3d58a77f59c12b70619608856c99eab2 315 PRINTS PR01755 Bacterial translocase SecF protein signature 200 218 2.5E-31 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CVS42_RS07575 3d58a77f59c12b70619608856c99eab2 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 284 5.0E-81 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CVS42_RS07575 3d58a77f59c12b70619608856c99eab2 315 Pfam PF02355 Protein export membrane protein 110 292 3.3E-64 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CVS42_RS07575 3d58a77f59c12b70619608856c99eab2 315 SUPERFAMILY SSF82866 74 295 1.28E-40 T 29-03-2018 CVS42_RS03810 ce3ed50b999f5454c3ddb83c46d880be 255 Gene3D G3DSA:3.30.540.10 6 153 6.9E-38 T 29-03-2018 CVS42_RS03810 ce3ed50b999f5454c3ddb83c46d880be 255 PRINTS PR00377 Inositol monophosphatase superfamily signature 87 103 6.6E-11 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS03810 ce3ed50b999f5454c3ddb83c46d880be 255 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 6.6E-11 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS03810 ce3ed50b999f5454c3ddb83c46d880be 255 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 6.6E-11 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS03810 ce3ed50b999f5454c3ddb83c46d880be 255 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 6.6E-11 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS03810 ce3ed50b999f5454c3ddb83c46d880be 255 Pfam PF00459 Inositol monophosphatase family 13 247 3.6E-45 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS03810 ce3ed50b999f5454c3ddb83c46d880be 255 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 12 254 5.6E-88 T 29-03-2018 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 CVS42_RS03810 ce3ed50b999f5454c3ddb83c46d880be 255 Gene3D G3DSA:3.40.190.80 154 255 1.2E-30 T 29-03-2018 CVS42_RS03810 ce3ed50b999f5454c3ddb83c46d880be 255 SUPERFAMILY SSF56655 7 252 7.98E-71 T 29-03-2018 CVS42_RS03810 ce3ed50b999f5454c3ddb83c46d880be 255 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 87 100 - T 29-03-2018 IPR020583 Inositol monophosphatase, metal-binding site CVS42_RS05875 bdcfcaf7aff8249bb5537728be926e1b 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 263 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CVS42_RS05875 bdcfcaf7aff8249bb5537728be926e1b 271 Pfam PF12833 Helix-turn-helix domain 191 267 6.1E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS05875 bdcfcaf7aff8249bb5537728be926e1b 271 Gene3D G3DSA:2.60.120.280 17 172 1.6E-7 T 29-03-2018 CVS42_RS05875 bdcfcaf7aff8249bb5537728be926e1b 271 Gene3D G3DSA:1.10.10.60 173 220 5.9E-10 T 29-03-2018 CVS42_RS05875 bdcfcaf7aff8249bb5537728be926e1b 271 SMART SM00342 184 267 4.8E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS05875 bdcfcaf7aff8249bb5537728be926e1b 271 SUPERFAMILY SSF51215 27 149 7.45E-7 T 29-03-2018 CVS42_RS05875 bdcfcaf7aff8249bb5537728be926e1b 271 SUPERFAMILY SSF46689 220 268 1.36E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS05875 bdcfcaf7aff8249bb5537728be926e1b 271 Gene3D G3DSA:1.10.10.60 221 269 4.6E-14 T 29-03-2018 CVS42_RS05875 bdcfcaf7aff8249bb5537728be926e1b 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 9.5E-8 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS05875 bdcfcaf7aff8249bb5537728be926e1b 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 9.5E-8 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS05875 bdcfcaf7aff8249bb5537728be926e1b 271 SUPERFAMILY SSF46689 167 217 1.73E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 Gene3D G3DSA:2.150.10.10 1608 1956 7.5E-24 T 29-03-2018 CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 1861 1958 7.5E-14 T 29-03-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 SMART SM00237 350 448 0.0024 T 29-03-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 Pfam PF03160 Calx-beta domain 364 447 1.6E-8 T 29-03-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 Pfam PF03160 Calx-beta domain 479 580 0.001 T 29-03-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 PRINTS PR00313 NodO calcium binding signature 1839 1848 3.8E-7 T 29-03-2018 CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 PRINTS PR00313 NodO calcium binding signature 1821 1829 3.8E-7 T 29-03-2018 CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 PRINTS PR00313 NodO calcium binding signature 1800 1811 3.8E-7 T 29-03-2018 CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 PRINTS PR00313 NodO calcium binding signature 1830 1838 3.8E-7 T 29-03-2018 CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1817 1835 - T 29-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 SUPERFAMILY SSF141072 362 470 1.27E-18 T 29-03-2018 CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 SUPERFAMILY SSF141072 492 597 4.19E-10 T 29-03-2018 CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 Gene3D G3DSA:2.60.120.640 1273 1384 1.1E-7 T 29-03-2018 CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 Gene3D G3DSA:2.60.120.640 612 720 1.1E-14 T 29-03-2018 CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 Gene3D G3DSA:2.60.120.640 502 611 0.0073 T 29-03-2018 CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 SUPERFAMILY SSF51120 1783 1915 2.62E-24 T 29-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 SUPERFAMILY SSF51120 1663 1740 2.62E-24 T 29-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 Gene3D G3DSA:2.60.40.1310 243 376 1.7E-27 T 29-03-2018 CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 Gene3D G3DSA:2.60.40.1310 138 242 6.6E-12 T 29-03-2018 CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1808 1826 - T 29-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1106 1181 1.7E-4 T 29-03-2018 IPR010221 VCBS repeat CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 Gene3D G3DSA:2.60.500.10 1060 1170 3.4E-12 T 29-03-2018 CVS42_RS03845 ec057d0ce907181da860b7a02633100c 1963 Gene3D G3DSA:2.60.500.10 1171 1272 1.7E-7 T 29-03-2018 CVS42_RS01015 7d79732a97e9928a0652cd62c3f16356 192 Pfam PF01106 NifU-like domain 111 174 3.2E-19 T 29-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CVS42_RS01015 7d79732a97e9928a0652cd62c3f16356 192 SUPERFAMILY SSF117916 95 184 1.33E-22 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CVS42_RS01015 7d79732a97e9928a0652cd62c3f16356 192 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 192 45.725 T 29-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CVS42_RS01015 7d79732a97e9928a0652cd62c3f16356 192 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 99 2.0E-10 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CVS42_RS01015 7d79732a97e9928a0652cd62c3f16356 192 Gene3D G3DSA:2.60.300.12 1 98 4.2E-17 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CVS42_RS01015 7d79732a97e9928a0652cd62c3f16356 192 Gene3D G3DSA:3.30.300.130 102 188 2.4E-23 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CVS42_RS01015 7d79732a97e9928a0652cd62c3f16356 192 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 192 2.3E-98 T 29-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CVS42_RS01015 7d79732a97e9928a0652cd62c3f16356 192 SUPERFAMILY SSF89360 1 97 2.16E-22 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CVS42_RS01015 7d79732a97e9928a0652cd62c3f16356 192 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 181 4.0E-23 T 29-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CVS42_RS03560 979505d989dc75eb2cd36dcffe3f0de2 186 Gene3D G3DSA:2.160.10.10 8 180 5.4E-33 T 29-03-2018 CVS42_RS03560 979505d989dc75eb2cd36dcffe3f0de2 186 SUPERFAMILY SSF51161 7 139 1.94E-32 T 29-03-2018 IPR011004 Trimeric LpxA-like CVS42_RS03560 979505d989dc75eb2cd36dcffe3f0de2 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 3.4E-5 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS03560 979505d989dc75eb2cd36dcffe3f0de2 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 111 4.4E-6 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS16520 545039ae27d400af67b512689d9839b3 157 SUPERFAMILY SSF46767 74 154 4.19E-33 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CVS42_RS16520 545039ae27d400af67b512689d9839b3 157 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 125 131 - T 29-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CVS42_RS16520 545039ae27d400af67b512689d9839b3 157 Gene3D G3DSA:1.10.10.10 71 156 5.5E-36 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS16520 545039ae27d400af67b512689d9839b3 157 SUPERFAMILY SSF53155 4 79 4.51E-12 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CVS42_RS16520 545039ae27d400af67b512689d9839b3 157 Gene3D G3DSA:3.30.160.70 1 70 4.3E-16 T 29-03-2018 CVS42_RS16520 545039ae27d400af67b512689d9839b3 157 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 155 40.415 T 29-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 CVS42_RS16520 545039ae27d400af67b512689d9839b3 157 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 75 154 1.6E-38 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CVS42_RS16520 545039ae27d400af67b512689d9839b3 157 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 76 155 1.0E-33 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CVS42_RS16520 545039ae27d400af67b512689d9839b3 157 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 68 4.2E-7 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CVS42_RS16745 fa943063068cdc7f1c1838fb470152d2 156 SUPERFAMILY SSF52121 3 154 3.01E-60 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS16745 fa943063068cdc7f1c1838fb470152d2 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.927 T 29-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS16745 fa943063068cdc7f1c1838fb470152d2 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 4.0E-56 T 29-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS16745 fa943063068cdc7f1c1838fb470152d2 156 Gene3D G3DSA:3.40.50.960 1 155 2.3E-62 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS16745 fa943063068cdc7f1c1838fb470152d2 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.8E-55 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS10670 dd3ad97f7acd0f7ab98225441364159c 536 SUPERFAMILY SSF53850 42 509 2.71E-89 T 29-03-2018 CVS42_RS10670 dd3ad97f7acd0f7ab98225441364159c 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 439 2.5E-73 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CVS42_RS10670 dd3ad97f7acd0f7ab98225441364159c 536 PIRSF PIRSF002741 14 521 3.3E-66 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CVS42_RS10670 dd3ad97f7acd0f7ab98225441364159c 536 Gene3D G3DSA:3.90.76.10 60 180 3.3E-21 T 29-03-2018 CVS42_RS10670 dd3ad97f7acd0f7ab98225441364159c 536 Gene3D G3DSA:3.40.190.10 181 296 5.7E-25 T 29-03-2018 CVS42_RS10670 dd3ad97f7acd0f7ab98225441364159c 536 Gene3D G3DSA:3.10.105.10 297 482 5.2E-34 T 29-03-2018 CVS42_RS04595 c4e065b85c6f6101b0fbb609a640e4ff 228 Gene3D G3DSA:3.40.50.2300 1 119 1.5E-33 T 29-03-2018 CVS42_RS04595 c4e065b85c6f6101b0fbb609a640e4ff 228 SUPERFAMILY SSF46894 118 216 2.21E-25 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS04595 c4e065b85c6f6101b0fbb609a640e4ff 228 SMART SM00862 145 216 2.0E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS04595 c4e065b85c6f6101b0fbb609a640e4ff 228 Gene3D G3DSA:1.10.10.10 120 221 4.6E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS04595 c4e065b85c6f6101b0fbb609a640e4ff 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 215 6.5E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS04595 c4e065b85c6f6101b0fbb609a640e4ff 228 SUPERFAMILY SSF52172 1 131 1.24E-35 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS04595 c4e065b85c6f6101b0fbb609a640e4ff 228 SMART SM00448 1 112 6.5E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS04595 c4e065b85c6f6101b0fbb609a640e4ff 228 Pfam PF00072 Response regulator receiver domain 3 112 2.6E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS08700 0a842f4ebd87c035e5cd9e59207b6886 199 SUPERFAMILY SSF48695 7 185 4.3E-26 T 29-03-2018 IPR011031 Multihaem cytochrome CVS42_RS08700 0a842f4ebd87c035e5cd9e59207b6886 199 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 38 180 2.0E-60 T 29-03-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 CVS42_RS08700 0a842f4ebd87c035e5cd9e59207b6886 199 Gene3D G3DSA:1.10.3820.10 115 198 3.0E-9 T 29-03-2018 CVS42_RS08700 0a842f4ebd87c035e5cd9e59207b6886 199 Pfam PF13435 Cytochrome c554 and c-prime 45 84 0.0061 T 29-03-2018 IPR023155 Cytochrome c-552/4 CVS42_RS08700 0a842f4ebd87c035e5cd9e59207b6886 199 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 144 180 8.3E-5 T 29-03-2018 IPR010177 Doubled CXXCH motif CVS42_RS08700 0a842f4ebd87c035e5cd9e59207b6886 199 Gene3D G3DSA:3.90.10.10 19 114 6.9E-8 T 29-03-2018 CVS42_RS09330 3bbb3b117c40099918b4f00d83b9fc01 438 SUPERFAMILY SSF51338 34 76 1.67E-10 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS09330 3bbb3b117c40099918b4f00d83b9fc01 438 SUPERFAMILY SSF51338 377 396 1.67E-10 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS09330 3bbb3b117c40099918b4f00d83b9fc01 438 Pfam PF01979 Amidohydrolase family 72 434 6.8E-78 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CVS42_RS09330 3bbb3b117c40099918b4f00d83b9fc01 438 Gene3D G3DSA:3.20.20.140 90 377 2.1E-71 T 29-03-2018 CVS42_RS09330 3bbb3b117c40099918b4f00d83b9fc01 438 Gene3D G3DSA:2.30.40.10 17 89 9.8E-12 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS09330 3bbb3b117c40099918b4f00d83b9fc01 438 SUPERFAMILY SSF51556 75 378 4.13E-103 T 29-03-2018 IPR032466 Metal-dependent hydrolase CVS42_RS09330 3bbb3b117c40099918b4f00d83b9fc01 438 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 33 431 1.1E-188 T 29-03-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 CVS42_RS20695 2662f674e20103865e9eb9e0fde4e5fa 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 318 32.49 T 29-03-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 CVS42_RS20695 2662f674e20103865e9eb9e0fde4e5fa 321 Gene3D G3DSA:3.30.930.10 65 271 7.0E-61 T 29-03-2018 CVS42_RS20695 2662f674e20103865e9eb9e0fde4e5fa 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 318 1.0E-64 T 29-03-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 CVS42_RS20695 2662f674e20103865e9eb9e0fde4e5fa 321 SUPERFAMILY SSF50037 272 318 3.16E-11 T 29-03-2018 IPR008988 Transcriptional repressor, C-terminal CVS42_RS20695 2662f674e20103865e9eb9e0fde4e5fa 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 7.1E-19 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CVS42_RS20695 2662f674e20103865e9eb9e0fde4e5fa 321 Pfam PF02237 Biotin protein ligase C terminal domain 273 318 7.7E-12 T 29-03-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 CVS42_RS20695 2662f674e20103865e9eb9e0fde4e5fa 321 Pfam PF08279 HTH domain 8 59 3.9E-12 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 CVS42_RS20695 2662f674e20103865e9eb9e0fde4e5fa 321 Gene3D G3DSA:2.30.30.100 272 318 1.2E-15 T 29-03-2018 CVS42_RS20695 2662f674e20103865e9eb9e0fde4e5fa 321 Gene3D G3DSA:1.10.10.10 1 64 5.2E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20695 2662f674e20103865e9eb9e0fde4e5fa 321 SUPERFAMILY SSF55681 72 269 4.77E-58 T 29-03-2018 CVS42_RS20695 2662f674e20103865e9eb9e0fde4e5fa 321 SUPERFAMILY SSF46785 1 61 5.52E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS07635 2fd53a92a822c53f0ca666a1a45ffc30 172 SUPERFAMILY SSF47144 78 170 1.7E-21 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CVS42_RS07635 2fd53a92a822c53f0ca666a1a45ffc30 172 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 2.0E-40 T 29-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CVS42_RS07635 2fd53a92a822c53f0ca666a1a45ffc30 172 Gene3D G3DSA:1.10.287.110 1 79 8.4E-11 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS07635 2fd53a92a822c53f0ca666a1a45ffc30 172 SMART SM00271 1 66 3.3E-6 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS07635 2fd53a92a822c53f0ca666a1a45ffc30 172 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 24.804 T 29-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CVS42_RS07635 2fd53a92a822c53f0ca666a1a45ffc30 172 SUPERFAMILY SSF46565 1 74 1.27E-16 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS07635 2fd53a92a822c53f0ca666a1a45ffc30 172 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 4.6E-15 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CVS42_RS07635 2fd53a92a822c53f0ca666a1a45ffc30 172 Gene3D G3DSA:1.20.1280.20 80 169 6.6E-22 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CVS42_RS17260 2b6c0aea46b556926c0815718fc17c61 428 PIRSF PIRSF006809 3 421 1.5E-149 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 CVS42_RS17260 2b6c0aea46b556926c0815718fc17c61 428 SUPERFAMILY SSF54980 365 422 3.6E-12 T 29-03-2018 IPR035647 EF-G domain III/V-like CVS42_RS17260 2b6c0aea46b556926c0815718fc17c61 428 Pfam PF01926 50S ribosome-binding GTPase 200 318 3.4E-21 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS17260 2b6c0aea46b556926c0815718fc17c61 428 SUPERFAMILY SSF52540 198 377 1.12E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS17260 2b6c0aea46b556926c0815718fc17c61 428 Gene3D G3DSA:3.40.50.300 232 385 1.1E-17 T 29-03-2018 CVS42_RS17260 2b6c0aea46b556926c0815718fc17c61 428 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 360 2.1E-155 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 CVS42_RS17260 2b6c0aea46b556926c0815718fc17c61 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 5.9E-11 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS17260 2b6c0aea46b556926c0815718fc17c61 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 5.9E-11 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS17260 2b6c0aea46b556926c0815718fc17c61 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 5.9E-11 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS17260 2b6c0aea46b556926c0815718fc17c61 428 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 9.4E-31 T 29-03-2018 IPR025121 GTPase HflX, N-terminal CVS42_RS17260 2b6c0aea46b556926c0815718fc17c61 428 Gene3D G3DSA:3.40.50.300 165 231 1.2E-11 T 29-03-2018 CVS42_RS17260 2b6c0aea46b556926c0815718fc17c61 428 Hamap MF_00900 GTPase HflX [hflX]. 27 390 46.816 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 CVS42_RS17260 2b6c0aea46b556926c0815718fc17c61 428 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 8.3E-29 T 29-03-2018 IPR032305 GTP-binding protein, middle domain CVS42_RS02960 00a89ef6d57fd3df9c31734f132296c6 128 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 5 126 9.5E-51 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CVS42_RS02960 00a89ef6d57fd3df9c31734f132296c6 128 Pfam PF01641 SelR domain 8 126 3.5E-51 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CVS42_RS02960 00a89ef6d57fd3df9c31734f132296c6 128 Gene3D G3DSA:2.170.150.20 1 128 1.0E-57 T 29-03-2018 CVS42_RS02960 00a89ef6d57fd3df9c31734f132296c6 128 SUPERFAMILY SSF51316 5 126 3.38E-56 T 29-03-2018 IPR011057 Mss4-like CVS42_RS20655 e6175d1a57752e8db8507a9b07144633 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.734 T 29-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CVS42_RS20655 e6175d1a57752e8db8507a9b07144633 142 SUPERFAMILY SSF54747 3 73 1.31E-29 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal CVS42_RS20655 e6175d1a57752e8db8507a9b07144633 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 6.0E-15 T 29-03-2018 CVS42_RS20655 e6175d1a57752e8db8507a9b07144633 142 Gene3D G3DSA:3.30.1550.10 3 72 4.0E-35 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal CVS42_RS20655 e6175d1a57752e8db8507a9b07144633 142 Gene3D G3DSA:1.10.10.250 73 141 6.1E-24 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CVS42_RS20655 e6175d1a57752e8db8507a9b07144633 142 SMART SM00649 9 141 6.5E-83 T 29-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CVS42_RS20655 e6175d1a57752e8db8507a9b07144633 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 29-03-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS20655 e6175d1a57752e8db8507a9b07144633 142 SUPERFAMILY SSF46906 68 141 9.29E-26 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CVS42_RS20655 e6175d1a57752e8db8507a9b07144633 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.2E-24 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CVS42_RS20655 e6175d1a57752e8db8507a9b07144633 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 6.9E-65 T 29-03-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS20655 e6175d1a57752e8db8507a9b07144633 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 9.7E-29 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal CVS42_RS13625 5538e446cd7b48a20a65db632966b44d 106 SUPERFAMILY SSF101498 1 98 3.79E-18 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CVS42_RS13625 5538e446cd7b48a20a65db632966b44d 106 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 98 7.5E-22 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CVS42_RS13625 5538e446cd7b48a20a65db632966b44d 106 Gene3D G3DSA:1.10.287.1160 67 95 7.5E-12 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CVS42_RS13625 5538e446cd7b48a20a65db632966b44d 106 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 95 3.3E-17 T 29-03-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CVS42_RS13680 a4640f330ffa09b3de99d5c8e74684ff 248 Pfam PF08220 DeoR-like helix-turn-helix domain 4 58 1.0E-16 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CVS42_RS13680 a4640f330ffa09b3de99d5c8e74684ff 248 SUPERFAMILY SSF100950 69 227 8.37E-25 T 29-03-2018 CVS42_RS13680 a4640f330ffa09b3de99d5c8e74684ff 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 1.4E-6 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CVS42_RS13680 a4640f330ffa09b3de99d5c8e74684ff 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 1.4E-6 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CVS42_RS13680 a4640f330ffa09b3de99d5c8e74684ff 248 SMART SM00420 4 56 3.0E-18 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CVS42_RS13680 a4640f330ffa09b3de99d5c8e74684ff 248 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CVS42_RS13680 a4640f330ffa09b3de99d5c8e74684ff 248 Gene3D G3DSA:1.10.10.10 3 68 3.3E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS13680 a4640f330ffa09b3de99d5c8e74684ff 248 SMART SM01134 67 227 2.1E-51 T 29-03-2018 CVS42_RS13680 a4640f330ffa09b3de99d5c8e74684ff 248 Pfam PF00455 DeoR C terminal sensor domain 70 225 2.1E-40 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CVS42_RS13680 a4640f330ffa09b3de99d5c8e74684ff 248 Gene3D G3DSA:3.40.50.1360 69 236 8.6E-33 T 29-03-2018 CVS42_RS13680 a4640f330ffa09b3de99d5c8e74684ff 248 SUPERFAMILY SSF46785 1 67 3.3E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS14855 e0188318fadee0a21037e797abf65509 226 Pfam PF04519 Polymer-forming cytoskeletal 79 175 1.4E-18 T 29-03-2018 IPR007607 Protein of unknown function DUF583 CVS42_RS00530 00d4302cb8c858861d171b6b6f1a3beb 166 Gene3D G3DSA:1.20.120.450 1 164 5.0E-49 T 29-03-2018 CVS42_RS00530 00d4302cb8c858861d171b6b6f1a3beb 166 Pfam PF09351 Domain of unknown function (DUF1993) 5 160 5.1E-52 T 29-03-2018 IPR018531 Domain of unknown function DUF1993 CVS42_RS00530 00d4302cb8c858861d171b6b6f1a3beb 166 SUPERFAMILY SSF109854 7 162 6.41E-47 T 29-03-2018 IPR034660 DinB/YfiT-like putative metalloenzymes CVS42_RS09715 55dfaad83c354360df43e712808cabf9 355 Gene3D G3DSA:3.40.190.10 195 318 1.8E-20 T 29-03-2018 CVS42_RS09715 55dfaad83c354360df43e712808cabf9 355 SUPERFAMILY SSF53850 31 338 1.93E-95 T 29-03-2018 CVS42_RS09715 55dfaad83c354360df43e712808cabf9 355 Gene3D G3DSA:3.40.190.10 24 194 2.6E-36 T 29-03-2018 CVS42_RS09715 55dfaad83c354360df43e712808cabf9 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 53 74 1.5E-86 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS09715 55dfaad83c354360df43e712808cabf9 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 251 270 1.5E-86 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS09715 55dfaad83c354360df43e712808cabf9 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 127 143 1.5E-86 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS09715 55dfaad83c354360df43e712808cabf9 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 80 94 1.5E-86 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS09715 55dfaad83c354360df43e712808cabf9 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 152 166 1.5E-86 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS09715 55dfaad83c354360df43e712808cabf9 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 96 109 1.5E-86 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS09715 55dfaad83c354360df43e712808cabf9 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 37 53 1.5E-86 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS09715 55dfaad83c354360df43e712808cabf9 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 170 189 1.5E-86 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS09715 55dfaad83c354360df43e712808cabf9 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 207 226 1.5E-86 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS09715 55dfaad83c354360df43e712808cabf9 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 296 322 1.5E-86 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS09715 55dfaad83c354360df43e712808cabf9 355 PIRSF PIRSF019574 1 351 3.2E-127 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS09715 55dfaad83c354360df43e712808cabf9 355 Pfam PF13416 Bacterial extracellular solute-binding protein 47 317 3.1E-48 T 29-03-2018 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 Gene3D G3DSA:1.10.520.10 442 589 3.0E-32 T 29-03-2018 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 Pfam PF00141 Peroxidase 405 698 1.6E-38 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 Pfam PF00141 Peroxidase 70 397 2.7E-51 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 29-03-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 Hamap MF_01961 Catalase-peroxidase [katG]. 7 724 39.825 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 SUPERFAMILY SSF48113 432 723 2.8E-111 T 29-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 1.9E-19 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 1.9E-19 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 1.9E-19 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 1.9E-19 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 1.9E-19 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 Gene3D G3DSA:1.10.520.10 56 212 2.2E-37 T 29-03-2018 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 Gene3D G3DSA:1.10.420.10 233 399 1.1E-42 T 29-03-2018 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 Gene3D G3DSA:1.10.420.10 590 699 1.3E-34 T 29-03-2018 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 SUPERFAMILY SSF48113 19 430 8.99E-153 T 29-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 1.9E-50 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 1.9E-50 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 1.9E-50 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 1.9E-50 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 1.9E-50 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CVS42_RS01395 ad796c06f5421be58b4ba545baf4e3b4 725 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 724 0.0 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CVS42_RS20875 f1d36ed6873edb1fda601cec5304dda7 442 SUPERFAMILY SSF55424 321 440 8.93E-33 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CVS42_RS20875 f1d36ed6873edb1fda601cec5304dda7 442 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 298 7.6E-57 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS20875 f1d36ed6873edb1fda601cec5304dda7 442 SUPERFAMILY SSF51905 1 315 3.18E-47 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS20875 f1d36ed6873edb1fda601cec5304dda7 442 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 328 430 5.8E-18 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CVS42_RS20875 f1d36ed6873edb1fda601cec5304dda7 442 Gene3D G3DSA:3.50.50.60 105 242 8.0E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS20875 f1d36ed6873edb1fda601cec5304dda7 442 Gene3D G3DSA:3.50.50.60 244 340 4.7E-9 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS20875 f1d36ed6873edb1fda601cec5304dda7 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 234 248 3.6E-16 T 29-03-2018 CVS42_RS20875 f1d36ed6873edb1fda601cec5304dda7 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 3.6E-16 T 29-03-2018 CVS42_RS20875 f1d36ed6873edb1fda601cec5304dda7 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 282 3.6E-16 T 29-03-2018 CVS42_RS20875 f1d36ed6873edb1fda601cec5304dda7 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 3.6E-16 T 29-03-2018 CVS42_RS20875 f1d36ed6873edb1fda601cec5304dda7 442 Gene3D G3DSA:3.50.50.60 1 104 3.3E-12 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS20875 f1d36ed6873edb1fda601cec5304dda7 442 Gene3D G3DSA:3.30.390.30 341 442 1.9E-26 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CVS42_RS20875 f1d36ed6873edb1fda601cec5304dda7 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 3.9E-25 T 29-03-2018 CVS42_RS20875 f1d36ed6873edb1fda601cec5304dda7 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 3.9E-25 T 29-03-2018 CVS42_RS20875 f1d36ed6873edb1fda601cec5304dda7 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 282 3.9E-25 T 29-03-2018 CVS42_RS20875 f1d36ed6873edb1fda601cec5304dda7 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 3.9E-25 T 29-03-2018 CVS42_RS20875 f1d36ed6873edb1fda601cec5304dda7 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 3.9E-25 T 29-03-2018 CVS42_RS03155 fe16c2504403691c0c5fa4a149691599 302 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 14 298 41.525 T 29-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 CVS42_RS03155 fe16c2504403691c0c5fa4a149691599 302 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 14 278 3.2E-111 T 29-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 CVS42_RS03155 fe16c2504403691c0c5fa4a149691599 302 Gene3D G3DSA:3.40.50.620 124 230 2.9E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS03155 fe16c2504403691c0c5fa4a149691599 302 SUPERFAMILY SSF52374 14 293 8.73E-84 T 29-03-2018 CVS42_RS03155 fe16c2504403691c0c5fa4a149691599 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 46 59 6.2E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CVS42_RS03155 fe16c2504403691c0c5fa4a149691599 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 202 6.2E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CVS42_RS03155 fe16c2504403691c0c5fa4a149691599 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 178 188 6.2E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CVS42_RS03155 fe16c2504403691c0c5fa4a149691599 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 17 29 6.2E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CVS42_RS03155 fe16c2504403691c0c5fa4a149691599 302 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 16 245 3.0E-39 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CVS42_RS03155 fe16c2504403691c0c5fa4a149691599 302 Gene3D G3DSA:3.40.50.620 14 123 8.9E-30 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS21330 909dab599718609145f616c085741b10 809 SUPERFAMILY SSF56784 548 787 4.0E-56 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS21330 909dab599718609145f616c085741b10 809 SUPERFAMILY SSF56784 496 515 4.0E-56 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS21330 909dab599718609145f616c085741b10 809 Gene3D G3DSA:3.30.70.100 74 144 5.4E-17 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 ProSitePatterns PS01047 Heavy-metal-associated domain. 15 43 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CVS42_RS21330 909dab599718609145f616c085741b10 809 Pfam PF00702 haloacid dehalogenase-like hydrolase 493 701 3.0E-36 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 SUPERFAMILY SSF55008 74 143 1.57E-16 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CVS42_RS21330 909dab599718609145f616c085741b10 809 SUPERFAMILY SSF81665 265 301 5.75E-14 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CVS42_RS21330 909dab599718609145f616c085741b10 809 SUPERFAMILY SSF81665 398 486 5.75E-14 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CVS42_RS21330 909dab599718609145f616c085741b10 809 PRINTS PR00943 Copper-transporting ATPase signature 217 236 3.9E-8 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 PRINTS PR00943 Copper-transporting ATPase signature 267 286 3.9E-8 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 PRINTS PR00943 Copper-transporting ATPase signature 420 434 3.9E-8 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 PRINTS PR00943 Copper-transporting ATPase signature 663 680 3.9E-8 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 PRINTS PR00943 Copper-transporting ATPase signature 287 305 3.9E-8 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 PRINTS PR00943 Copper-transporting ATPase signature 480 495 3.9E-8 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 253 789 4.2E-121 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 Pfam PF00122 E1-E2 ATPase 298 477 1.3E-53 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 SUPERFAMILY SSF55008 6 71 2.09E-11 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CVS42_RS21330 909dab599718609145f616c085741b10 809 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 499 505 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CVS42_RS21330 909dab599718609145f616c085741b10 809 Gene3D G3DSA:3.30.70.100 9 73 1.4E-11 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 SUPERFAMILY SSF81653 300 397 2.75E-25 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CVS42_RS21330 909dab599718609145f616c085741b10 809 ProSitePatterns PS01047 Heavy-metal-associated domain. 81 110 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CVS42_RS21330 909dab599718609145f616c085741b10 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 710 722 9.7E-26 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 347 361 9.7E-26 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 687 706 9.7E-26 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 633 643 9.7E-26 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 497 511 9.7E-26 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 611 622 9.7E-26 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 Gene3D G3DSA:1.20.1110.10 252 508 5.0E-44 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 232 789 7.8E-179 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CVS42_RS21330 909dab599718609145f616c085741b10 809 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 213 790 2.3E-170 T 29-03-2018 CVS42_RS21330 909dab599718609145f616c085741b10 809 Gene3D G3DSA:3.40.1110.10 509 607 2.8E-20 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CVS42_RS21330 909dab599718609145f616c085741b10 809 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 270 766 9.0E-83 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CVS42_RS21330 909dab599718609145f616c085741b10 809 Pfam PF00403 Heavy-metal-associated domain 15 71 2.1E-8 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CVS42_RS21330 909dab599718609145f616c085741b10 809 Pfam PF00403 Heavy-metal-associated domain 79 138 2.3E-10 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CVS42_RS21330 909dab599718609145f616c085741b10 809 Gene3D G3DSA:3.40.50.1000 608 758 2.2E-39 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS03785 523d9c40fa48cc06e2ee82bcb6be78e1 307 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 67 280 2.3E-47 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CVS42_RS03785 523d9c40fa48cc06e2ee82bcb6be78e1 307 SUPERFAMILY SSF51306 78 305 3.14E-74 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CVS42_RS03785 523d9c40fa48cc06e2ee82bcb6be78e1 307 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 1.3E-26 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CVS42_RS03785 523d9c40fa48cc06e2ee82bcb6be78e1 307 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 1.3E-26 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CVS42_RS03785 523d9c40fa48cc06e2ee82bcb6be78e1 307 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 240 259 1.3E-26 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CVS42_RS03785 523d9c40fa48cc06e2ee82bcb6be78e1 307 Gene3D G3DSA:2.10.109.10 76 303 9.1E-58 T 29-03-2018 CVS42_RS03785 523d9c40fa48cc06e2ee82bcb6be78e1 307 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 29-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CVS42_RS03785 523d9c40fa48cc06e2ee82bcb6be78e1 307 ProSitePatterns PS00761 Signal peptidases I signature 3. 245 258 - T 29-03-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CVS42_RS03785 523d9c40fa48cc06e2ee82bcb6be78e1 307 Pfam PF10502 Signal peptidase, peptidase S26 237 277 1.7E-6 T 29-03-2018 IPR019533 Peptidase S26 CVS42_RS03785 523d9c40fa48cc06e2ee82bcb6be78e1 307 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 29-03-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 CVS42_RS03785 523d9c40fa48cc06e2ee82bcb6be78e1 307 Pfam PF00717 Peptidase S24-like 86 166 1.5E-21 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CVS42_RS03165 494488dd0bb47c91aff28b35b8b11ea1 169 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CVS42_RS03165 494488dd0bb47c91aff28b35b8b11ea1 169 Gene3D G3DSA:3.30.70.560 1 165 4.1E-56 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CVS42_RS03165 494488dd0bb47c91aff28b35b8b11ea1 169 SUPERFAMILY SSF55083 1 157 6.02E-54 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CVS42_RS03165 494488dd0bb47c91aff28b35b8b11ea1 169 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 4.0E-43 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CVS42_RS03165 494488dd0bb47c91aff28b35b8b11ea1 169 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 4.6E-36 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CVS42_RS07360 958e965bad22435917e2bb841d1743d4 206 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 3.3E-26 T 29-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CVS42_RS07360 958e965bad22435917e2bb841d1743d4 206 PIRSF PIRSF011489 1 196 2.7E-58 T 29-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CVS42_RS10110 d2de4051862a7eeec38d68e0993c4fe5 319 Gene3D G3DSA:3.40.47.10 163 319 2.3E-40 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS10110 d2de4051862a7eeec38d68e0993c4fe5 319 SUPERFAMILY SSF53901 3 318 1.84E-69 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS10110 d2de4051862a7eeec38d68e0993c4fe5 319 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 8.4E-32 T 29-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CVS42_RS10110 d2de4051862a7eeec38d68e0993c4fe5 319 Gene3D G3DSA:3.40.47.10 1 162 3.9E-39 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS10110 d2de4051862a7eeec38d68e0993c4fe5 319 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 319 69.911 T 29-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CVS42_RS10110 d2de4051862a7eeec38d68e0993c4fe5 319 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 318 3.9E-139 T 29-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CVS42_RS10110 d2de4051862a7eeec38d68e0993c4fe5 319 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 230 318 1.7E-35 T 29-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CVS42_RS15070 3a21b625b4460d149ba94003691228bc 119 TIGRFAM TIGR01707 gspI: type II secretion system protein I 5 104 5.7E-30 T 29-03-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 CVS42_RS15070 3a21b625b4460d149ba94003691228bc 119 Gene3D G3DSA:3.30.1300.30 32 118 1.3E-26 T 29-03-2018 CVS42_RS15070 3a21b625b4460d149ba94003691228bc 119 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 26 6.2E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS15070 3a21b625b4460d149ba94003691228bc 119 SUPERFAMILY SSF54523 36 117 1.53E-26 T 29-03-2018 CVS42_RS15070 3a21b625b4460d149ba94003691228bc 119 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS15070 3a21b625b4460d149ba94003691228bc 119 Pfam PF02501 Type II secretion system (T2SS), protein I 39 117 7.4E-27 T 29-03-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 CVS42_RS15070 3a21b625b4460d149ba94003691228bc 119 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.6E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS14400 4d48bba85e1fc9565c49f8839b4c99fa 661 Pfam PF02719 Polysaccharide biosynthesis protein 291 584 1.0E-128 T 29-03-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CVS42_RS14400 4d48bba85e1fc9565c49f8839b4c99fa 661 SUPERFAMILY SSF51735 288 562 1.4E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS14400 4d48bba85e1fc9565c49f8839b4c99fa 661 Gene3D G3DSA:3.40.50.720 149 272 1.9E-26 T 29-03-2018 CVS42_RS14400 4d48bba85e1fc9565c49f8839b4c99fa 661 SUPERFAMILY SSF53335 124 335 5.15E-18 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS14400 4d48bba85e1fc9565c49f8839b4c99fa 661 Pfam PF13727 CoA-binding domain 78 246 6.1E-13 T 29-03-2018 CVS42_RS14400 4d48bba85e1fc9565c49f8839b4c99fa 661 Gene3D G3DSA:3.40.50.720 284 621 7.4E-61 T 29-03-2018 CVS42_RS05925 5763df077b7965ff9e35276cc58b542a 242 Pfam PF01514 Secretory protein of YscJ/FliF family 5 182 6.1E-28 T 29-03-2018 IPR006182 Secretory protein YscJ/FliF CVS42_RS05925 5763df077b7965ff9e35276cc58b542a 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 112 125 2.2E-30 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CVS42_RS05925 5763df077b7965ff9e35276cc58b542a 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 92 107 2.2E-30 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CVS42_RS05925 5763df077b7965ff9e35276cc58b542a 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 161 173 2.2E-30 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CVS42_RS05925 5763df077b7965ff9e35276cc58b542a 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 72 85 2.2E-30 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CVS42_RS05925 5763df077b7965ff9e35276cc58b542a 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 20 30 2.2E-30 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CVS42_RS05925 5763df077b7965ff9e35276cc58b542a 242 Gene3D G3DSA:3.30.70.1530 18 85 1.0E-18 T 29-03-2018 CVS42_RS05925 5763df077b7965ff9e35276cc58b542a 242 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 5 189 9.6E-72 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CVS42_RS20245 5b0d009f677cff63d919ad61911a4bc5 346 Gene3D G3DSA:3.30.420.40 8 162 2.4E-42 T 29-03-2018 CVS42_RS20245 5b0d009f677cff63d919ad61911a4bc5 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 71 94 6.9E-65 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CVS42_RS20245 5b0d009f677cff63d919ad61911a4bc5 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 51 69 6.9E-65 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CVS42_RS20245 5b0d009f677cff63d919ad61911a4bc5 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 6.9E-65 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CVS42_RS20245 5b0d009f677cff63d919ad61911a4bc5 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 6.9E-65 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CVS42_RS20245 5b0d009f677cff63d919ad61911a4bc5 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 6.9E-65 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CVS42_RS20245 5b0d009f677cff63d919ad61911a4bc5 346 Gene3D G3DSA:3.30.420.40 256 320 6.1E-9 T 29-03-2018 CVS42_RS20245 5b0d009f677cff63d919ad61911a4bc5 346 Pfam PF06723 MreB/Mbl protein 11 337 2.2E-149 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CVS42_RS20245 5b0d009f677cff63d919ad61911a4bc5 346 Gene3D G3DSA:3.30.420.40 163 197 6.4E-4 T 29-03-2018 CVS42_RS20245 5b0d009f677cff63d919ad61911a4bc5 346 Gene3D G3DSA:3.90.640.10 198 255 1.1E-28 T 29-03-2018 CVS42_RS20245 5b0d009f677cff63d919ad61911a4bc5 346 SUPERFAMILY SSF53067 9 151 1.68E-38 T 29-03-2018 CVS42_RS20245 5b0d009f677cff63d919ad61911a4bc5 346 SUPERFAMILY SSF53067 152 338 1.03E-49 T 29-03-2018 CVS42_RS20245 5b0d009f677cff63d919ad61911a4bc5 346 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 338 1.0E-165 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CVS42_RS16060 da47fcc36b815dac1c32236522c564be 293 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 287 7.4E-113 T 29-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CVS42_RS16060 da47fcc36b815dac1c32236522c564be 293 Gene3D G3DSA:3.30.479.20 156 286 1.2E-49 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CVS42_RS16060 da47fcc36b815dac1c32236522c564be 293 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 29-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CVS42_RS16060 da47fcc36b815dac1c32236522c564be 293 Pfam PF00889 Elongation factor TS 71 270 1.8E-68 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CVS42_RS16060 da47fcc36b815dac1c32236522c564be 293 Gene3D G3DSA:3.30.479.20 58 155 8.2E-19 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CVS42_RS16060 da47fcc36b815dac1c32236522c564be 293 SUPERFAMILY SSF54713 150 287 3.66E-53 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CVS42_RS16060 da47fcc36b815dac1c32236522c564be 293 SUPERFAMILY SSF54713 56 146 4.14E-20 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CVS42_RS16060 da47fcc36b815dac1c32236522c564be 293 SUPERFAMILY SSF46934 4 55 9.59E-18 T 29-03-2018 IPR009060 UBA-like GO:0005515 CVS42_RS16060 da47fcc36b815dac1c32236522c564be 293 Gene3D G3DSA:1.10.8.10 1 56 2.4E-22 T 29-03-2018 CVS42_RS16060 da47fcc36b815dac1c32236522c564be 293 Hamap MF_00050 Elongation factor Ts [tsf]. 1 287 81.446 T 29-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CVS42_RS11585 80cd1e72a896d2f34530369433b8159a 250 SUPERFAMILY SSF52402 1 243 1.88E-76 T 29-03-2018 CVS42_RS11585 80cd1e72a896d2f34530369433b8159a 250 SMART SM00893 23 211 1.4E-55 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CVS42_RS11585 80cd1e72a896d2f34530369433b8159a 250 Pfam PF01012 Electron transfer flavoprotein domain 30 203 5.9E-41 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CVS42_RS11585 80cd1e72a896d2f34530369433b8159a 250 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 29-03-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CVS42_RS11585 80cd1e72a896d2f34530369433b8159a 250 PIRSF PIRSF000090 1 249 2.2E-75 T 29-03-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CVS42_RS11585 80cd1e72a896d2f34530369433b8159a 250 Gene3D G3DSA:3.40.50.620 1 248 1.9E-76 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS15430 c29bc00bfa17ea7c6eefc1845048f710 339 Pfam PF00691 OmpA family 219 310 5.6E-18 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS15430 c29bc00bfa17ea7c6eefc1845048f710 339 SUPERFAMILY SSF56925 22 182 3.66E-24 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS15430 c29bc00bfa17ea7c6eefc1845048f710 339 Gene3D G3DSA:3.30.1330.60 204 339 2.0E-33 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS15430 c29bc00bfa17ea7c6eefc1845048f710 339 PRINTS PR01022 Outer membrane protein A signature 208 223 7.6E-17 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CVS42_RS15430 c29bc00bfa17ea7c6eefc1845048f710 339 PRINTS PR01022 Outer membrane protein A signature 310 323 7.6E-17 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CVS42_RS15430 c29bc00bfa17ea7c6eefc1845048f710 339 PRINTS PR01022 Outer membrane protein A signature 237 256 7.6E-17 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CVS42_RS15430 c29bc00bfa17ea7c6eefc1845048f710 339 PRINTS PR01022 Outer membrane protein A signature 276 295 7.6E-17 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CVS42_RS15430 c29bc00bfa17ea7c6eefc1845048f710 339 Gene3D G3DSA:2.40.160.20 9 203 1.4E-33 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS15430 c29bc00bfa17ea7c6eefc1845048f710 339 SUPERFAMILY SSF103088 209 331 4.45E-30 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS15430 c29bc00bfa17ea7c6eefc1845048f710 339 PRINTS PR01021 OMPA domain signature 252 267 1.8E-19 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS15430 c29bc00bfa17ea7c6eefc1845048f710 339 PRINTS PR01021 OMPA domain signature 267 283 1.8E-19 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS15430 c29bc00bfa17ea7c6eefc1845048f710 339 PRINTS PR01021 OMPA domain signature 220 242 1.8E-19 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS15430 c29bc00bfa17ea7c6eefc1845048f710 339 ProSitePatterns PS01068 OmpA-like domain. 254 298 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CVS42_RS15430 c29bc00bfa17ea7c6eefc1845048f710 339 Pfam PF01389 OmpA-like transmembrane domain 22 186 4.8E-46 T 29-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 CVS42_RS08435 a5f65c77b1843bf1334f2583adf545b2 311 Gene3D G3DSA:1.10.10.10 1 88 3.1E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08435 a5f65c77b1843bf1334f2583adf545b2 311 Gene3D G3DSA:3.40.190.10 182 271 9.7E-19 T 29-03-2018 CVS42_RS08435 a5f65c77b1843bf1334f2583adf545b2 311 Gene3D G3DSA:3.40.190.10 94 181 1.0E-10 T 29-03-2018 CVS42_RS08435 a5f65c77b1843bf1334f2583adf545b2 311 SUPERFAMILY SSF46785 6 92 1.79E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08435 a5f65c77b1843bf1334f2583adf545b2 311 SUPERFAMILY SSF53850 92 303 2.02E-41 T 29-03-2018 CVS42_RS08435 a5f65c77b1843bf1334f2583adf545b2 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.9E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS08435 a5f65c77b1843bf1334f2583adf545b2 311 Pfam PF03466 LysR substrate binding domain 92 297 6.8E-41 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 269 1.4E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 SMART SM00091 98 166 0.005 T 29-03-2018 IPR000014 PAS domain CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 Gene3D G3DSA:1.10.287.130 206 257 4.1E-16 T 29-03-2018 CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 3.4E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 3.4E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 3.4E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 3.4E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 SUPERFAMILY SSF55785 87 197 9.95E-11 T 29-03-2018 IPR000014 PAS domain CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 SMART SM00387 315 427 5.3E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 Gene3D G3DSA:3.30.565.10 258 428 5.6E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 SUPERFAMILY SSF47384 192 269 7.26E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 Pfam PF00989 PAS fold 99 150 7.5E-6 T 29-03-2018 IPR013767 PAS fold GO:0006355 CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 315 425 1.9E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 3.5E-31 T 29-03-2018 IPR021766 Protein of unknown function DUF3329 GO:0004673 CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 422 4.4E-133 T 29-03-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 SUPERFAMILY SSF55874 259 425 2.75E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 SMART SM00388 205 270 1.7E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS15545 e10d42e2893e8a4b1c67de815a002b1e 431 Gene3D G3DSA:3.30.450.20 80 205 7.3E-14 T 29-03-2018 CVS42_RS16980 cf1bd26c37ad7d3f6a255237cfad1a20 459 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 423 5.2E-26 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CVS42_RS16980 cf1bd26c37ad7d3f6a255237cfad1a20 459 SUPERFAMILY SSF48179 204 301 5.44E-34 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CVS42_RS16980 cf1bd26c37ad7d3f6a255237cfad1a20 459 SUPERFAMILY SSF51735 1 195 1.91E-55 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS16980 cf1bd26c37ad7d3f6a255237cfad1a20 459 Gene3D G3DSA:3.40.50.720 228 436 2.9E-68 T 29-03-2018 CVS42_RS16980 cf1bd26c37ad7d3f6a255237cfad1a20 459 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 4.0E-134 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CVS42_RS16980 cf1bd26c37ad7d3f6a255237cfad1a20 459 PIRSF PIRSF000124 1 439 5.4E-146 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CVS42_RS16980 cf1bd26c37ad7d3f6a255237cfad1a20 459 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 3.1E-38 T 29-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CVS42_RS16980 cf1bd26c37ad7d3f6a255237cfad1a20 459 SUPERFAMILY SSF52413 308 434 4.97E-36 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CVS42_RS16980 cf1bd26c37ad7d3f6a255237cfad1a20 459 PIRSF PIRSF500134 1 442 2.6E-181 T 29-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CVS42_RS16980 cf1bd26c37ad7d3f6a255237cfad1a20 459 Gene3D G3DSA:3.40.50.720 1 201 2.1E-58 T 29-03-2018 CVS42_RS16980 cf1bd26c37ad7d3f6a255237cfad1a20 459 SMART SM00984 320 424 1.3E-47 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CVS42_RS16980 cf1bd26c37ad7d3f6a255237cfad1a20 459 Gene3D G3DSA:1.20.5.170 204 227 5.6E-14 T 29-03-2018 CVS42_RS16980 cf1bd26c37ad7d3f6a255237cfad1a20 459 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 185 7.1E-61 T 29-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CVS42_RS16035 443c035e480ecab42fcf16fb33342e86 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 147 240 4.0E-36 T 29-03-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CVS42_RS16035 443c035e480ecab42fcf16fb33342e86 398 Gene3D G3DSA:1.10.1740.10 313 397 1.3E-30 T 29-03-2018 CVS42_RS16035 443c035e480ecab42fcf16fb33342e86 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 133 5.5E-44 T 29-03-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CVS42_RS16035 443c035e480ecab42fcf16fb33342e86 398 SUPERFAMILY SSF55347 127 275 2.65E-62 T 29-03-2018 CVS42_RS16035 443c035e480ecab42fcf16fb33342e86 398 SUPERFAMILY SSF69055 303 396 6.67E-30 T 29-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CVS42_RS16035 443c035e480ecab42fcf16fb33342e86 398 Gene3D G3DSA:3.40.50.720 2 151 8.2E-47 T 29-03-2018 CVS42_RS16035 443c035e480ecab42fcf16fb33342e86 398 PIRSF PIRSF006205 2 398 1.4E-148 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CVS42_RS16035 443c035e480ecab42fcf16fb33342e86 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 272 388 7.5E-40 T 29-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CVS42_RS16035 443c035e480ecab42fcf16fb33342e86 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 393 45.912 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CVS42_RS16035 443c035e480ecab42fcf16fb33342e86 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 390 1.0E-160 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CVS42_RS16035 443c035e480ecab42fcf16fb33342e86 398 SUPERFAMILY SSF51735 3 151 1.98E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS07440 a7cf56561c89f1a913a5610bc7a2bcad 346 Gene3D G3DSA:1.10.10.10 6 59 0.0016 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS07440 a7cf56561c89f1a913a5610bc7a2bcad 346 Gene3D G3DSA:3.30.420.10 153 346 3.5E-31 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS07440 a7cf56561c89f1a913a5610bc7a2bcad 346 SUPERFAMILY SSF46689 12 114 3.94E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS07440 a7cf56561c89f1a913a5610bc7a2bcad 346 Pfam PF13551 Winged helix-turn helix 10 74 2.4E-7 T 29-03-2018 CVS42_RS07440 a7cf56561c89f1a913a5610bc7a2bcad 346 Pfam PF00665 Integrase core domain 162 282 9.5E-21 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CVS42_RS07440 a7cf56561c89f1a913a5610bc7a2bcad 346 SUPERFAMILY SSF53098 164 331 4.17E-27 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS04820 59bfc94252632a195aa55b2930791356 405 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 2.6E-151 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CVS42_RS04820 59bfc94252632a195aa55b2930791356 405 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 2.3E-216 T 29-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 CVS42_RS04820 59bfc94252632a195aa55b2930791356 405 Gene3D G3DSA:3.40.640.10 49 289 1.1E-83 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS04820 59bfc94252632a195aa55b2930791356 405 SUPERFAMILY SSF53383 16 400 2.26E-127 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS04820 59bfc94252632a195aa55b2930791356 405 Gene3D G3DSA:3.90.1150.10 290 405 5.8E-33 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS04820 59bfc94252632a195aa55b2930791356 405 PIRSF PIRSF000521 173 402 5.1E-35 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS04820 59bfc94252632a195aa55b2930791356 405 PIRSF PIRSF000521 28 156 1.5E-7 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS04820 59bfc94252632a195aa55b2930791356 405 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 400 45.174 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CVS42_RS04820 59bfc94252632a195aa55b2930791356 405 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS04820 59bfc94252632a195aa55b2930791356 405 Pfam PF00202 Aminotransferase class-III 19 399 2.3E-129 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS13755 6cdbb284d8701a97cba6d4234cddb379 382 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 370 4.8E-85 T 29-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CVS42_RS13755 6cdbb284d8701a97cba6d4234cddb379 382 SUPERFAMILY SSF56322 47 373 3.66E-90 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CVS42_RS13755 6cdbb284d8701a97cba6d4234cddb379 382 Pfam PF00425 chorismate binding enzyme 111 363 1.4E-74 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CVS42_RS13755 6cdbb284d8701a97cba6d4234cddb379 382 Gene3D G3DSA:3.60.120.10 32 374 1.4E-95 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CVS42_RS19925 58014d01b67a0c2bb80a87cb4cd8f146 356 SUPERFAMILY SSF82549 11 354 5.49E-124 T 29-03-2018 CVS42_RS19925 58014d01b67a0c2bb80a87cb4cd8f146 356 Gene3D G3DSA:3.30.1180.20 184 356 3.8E-52 T 29-03-2018 CVS42_RS19925 58014d01b67a0c2bb80a87cb4cd8f146 356 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 352 7.4E-143 T 29-03-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 CVS42_RS19925 58014d01b67a0c2bb80a87cb4cd8f146 356 Gene3D G3DSA:3.40.50.10440 11 183 3.9E-64 T 29-03-2018 CVS42_RS19925 58014d01b67a0c2bb80a87cb4cd8f146 356 Pfam PF02733 Dak1 domain 18 351 7.5E-125 T 29-03-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CVS42_RS04170 5f873c08f53acf87036b5a88e53d8731 411 Pfam PF13185 GAF domain 98 246 2.9E-8 T 29-03-2018 IPR003018 GAF domain GO:0005515 CVS42_RS04170 5f873c08f53acf87036b5a88e53d8731 411 Gene3D G3DSA:3.30.70.270 256 408 1.5E-33 T 29-03-2018 CVS42_RS04170 5f873c08f53acf87036b5a88e53d8731 411 Pfam PF00990 Diguanylate cyclase, GGDEF domain 259 396 4.3E-25 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS04170 5f873c08f53acf87036b5a88e53d8731 411 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 258 397 6.6E-24 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS04170 5f873c08f53acf87036b5a88e53d8731 411 Gene3D G3DSA:3.30.450.40 70 255 1.4E-15 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS04170 5f873c08f53acf87036b5a88e53d8731 411 SUPERFAMILY SSF55073 264 397 7.85E-28 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS04170 5f873c08f53acf87036b5a88e53d8731 411 SMART SM00267 248 401 1.5E-28 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS04170 5f873c08f53acf87036b5a88e53d8731 411 SUPERFAMILY SSF55781 65 246 1.53E-14 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS16070 43ced94ea64785a7c0f4b5b864a4dc8e 262 Hamap MF_01974 Methionine aminopeptidase [map]. 3 250 41.905 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CVS42_RS16070 43ced94ea64785a7c0f4b5b864a4dc8e 262 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CVS42_RS16070 43ced94ea64785a7c0f4b5b864a4dc8e 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 4.9E-22 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CVS42_RS16070 43ced94ea64785a7c0f4b5b864a4dc8e 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 4.9E-22 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CVS42_RS16070 43ced94ea64785a7c0f4b5b864a4dc8e 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 91 107 4.9E-22 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CVS42_RS16070 43ced94ea64785a7c0f4b5b864a4dc8e 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 4.9E-22 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CVS42_RS16070 43ced94ea64785a7c0f4b5b864a4dc8e 262 Gene3D G3DSA:3.90.230.10 2 262 8.3E-90 T 29-03-2018 CVS42_RS16070 43ced94ea64785a7c0f4b5b864a4dc8e 262 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 249 1.0E-96 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CVS42_RS16070 43ced94ea64785a7c0f4b5b864a4dc8e 262 SUPERFAMILY SSF55920 3 252 5.76E-90 T 29-03-2018 IPR000994 Peptidase M24 CVS42_RS16070 43ced94ea64785a7c0f4b5b864a4dc8e 262 Pfam PF00557 Metallopeptidase family M24 12 241 2.0E-54 T 29-03-2018 IPR000994 Peptidase M24 CVS42_RS06730 93b14ada026522cd44331bb83baea2cf 69 Pfam PF06568 Domain of unknown function (DUF1127) 29 58 1.2E-9 T 29-03-2018 IPR009506 Protein of unknown function DUF1127 CVS42_RS00665 a044ba7b7f71882d4f002e75fd99c5a2 231 Pfam PF12973 ChrR Cupin-like domain 137 206 3.1E-13 T 29-03-2018 IPR025979 ChrR-like cupin domain CVS42_RS00665 a044ba7b7f71882d4f002e75fd99c5a2 231 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 5 226 1.3E-53 T 29-03-2018 IPR012807 Anti-sigma factor ChrR, putative CVS42_RS00665 a044ba7b7f71882d4f002e75fd99c5a2 231 Gene3D G3DSA:2.60.120.10 66 225 1.3E-19 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS00665 a044ba7b7f71882d4f002e75fd99c5a2 231 SUPERFAMILY SSF51182 121 208 6.4E-16 T 29-03-2018 IPR011051 RmlC-like cupin domain CVS42_RS00910 8d8029942a7a380be94f410c48d31e3c 413 Gene3D G3DSA:3.40.50.720 160 412 2.9E-81 T 29-03-2018 CVS42_RS00910 8d8029942a7a380be94f410c48d31e3c 413 SUPERFAMILY SSF51735 162 407 8.41E-79 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS00910 8d8029942a7a380be94f410c48d31e3c 413 Gene3D G3DSA:3.40.50.10380 4 159 3.5E-34 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CVS42_RS00910 8d8029942a7a380be94f410c48d31e3c 413 PIRSF PIRSF000106 42 412 2.0E-69 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS00910 8d8029942a7a380be94f410c48d31e3c 413 Pfam PF00390 Malic enzyme, N-terminal domain 19 116 9.6E-21 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CVS42_RS00910 8d8029942a7a380be94f410c48d31e3c 413 SMART SM01274 17 150 5.2E-74 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CVS42_RS00910 8d8029942a7a380be94f410c48d31e3c 413 SUPERFAMILY SSF53223 8 160 3.09E-51 T 29-03-2018 CVS42_RS00910 8d8029942a7a380be94f410c48d31e3c 413 Pfam PF03949 Malic enzyme, NAD binding domain 164 355 3.8E-24 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CVS42_RS00910 8d8029942a7a380be94f410c48d31e3c 413 SMART SM00919 162 398 1.9E-135 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CVS42_RS00910 8d8029942a7a380be94f410c48d31e3c 413 ProSitePatterns PS00331 Malic enzymes signature. 158 174 - T 29-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CVS42_RS13135 c5173da125e049b37d61861cdc0df07a 301 PRINTS PR00207 Flagellin signature 111 134 4.5E-25 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CVS42_RS13135 c5173da125e049b37d61861cdc0df07a 301 PRINTS PR00207 Flagellin signature 37 54 4.5E-25 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CVS42_RS13135 c5173da125e049b37d61861cdc0df07a 301 PRINTS PR00207 Flagellin signature 76 95 4.5E-25 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CVS42_RS13135 c5173da125e049b37d61861cdc0df07a 301 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.2E-42 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CVS42_RS13135 c5173da125e049b37d61861cdc0df07a 301 Gene3D G3DSA:1.20.1330.10 40 273 1.1E-71 T 29-03-2018 CVS42_RS13135 c5173da125e049b37d61861cdc0df07a 301 Pfam PF00700 Bacterial flagellin C-terminal helical region 217 300 4.9E-24 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CVS42_RS13135 c5173da125e049b37d61861cdc0df07a 301 SUPERFAMILY SSF64518 1 300 6.54E-95 T 29-03-2018 CVS42_RS13895 1562680acf1e710ae698be5f1e2822cd 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 8.2E-20 T 29-03-2018 IPR021249 Protein of unknown function DUF2788 CVS42_RS02615 64a32320c3c71cf69758cc891c7b65a5 434 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 1.3E-127 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CVS42_RS02615 64a32320c3c71cf69758cc891c7b65a5 434 Pfam PF05525 Branched-chain amino acid transport protein 8 424 8.9E-140 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CVS42_RS01955 54e55eb4aac99812106af3096ce0cb26 173 Gene3D G3DSA:3.40.630.30 1 154 2.0E-26 T 29-03-2018 CVS42_RS01955 54e55eb4aac99812106af3096ce0cb26 173 Pfam PF00583 Acetyltransferase (GNAT) family 26 126 6.3E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS01955 54e55eb4aac99812106af3096ce0cb26 173 SUPERFAMILY SSF55729 3 143 7.32E-24 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS15890 c83d61af3c88bbc9c383dffcad4e0d6f 342 SMART SM00829 20 334 3.8E-56 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CVS42_RS15890 c83d61af3c88bbc9c383dffcad4e0d6f 342 Pfam PF00107 Zinc-binding dehydrogenase 161 288 7.0E-28 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CVS42_RS15890 c83d61af3c88bbc9c383dffcad4e0d6f 342 Gene3D G3DSA:3.40.50.720 143 267 1.1E-28 T 29-03-2018 CVS42_RS15890 c83d61af3c88bbc9c383dffcad4e0d6f 342 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 11 336 4.2E-140 T 29-03-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 CVS42_RS15890 c83d61af3c88bbc9c383dffcad4e0d6f 342 Gene3D G3DSA:3.90.180.10 268 338 9.1E-8 T 29-03-2018 CVS42_RS15890 c83d61af3c88bbc9c383dffcad4e0d6f 342 SUPERFAMILY SSF50129 7 155 7.0E-40 T 29-03-2018 IPR011032 GroES-like CVS42_RS15890 c83d61af3c88bbc9c383dffcad4e0d6f 342 SUPERFAMILY SSF51735 121 298 1.09E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS15890 c83d61af3c88bbc9c383dffcad4e0d6f 342 Gene3D G3DSA:3.90.180.10 7 142 1.4E-43 T 29-03-2018 CVS42_RS15890 c83d61af3c88bbc9c383dffcad4e0d6f 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 37 97 7.5E-10 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CVS42_RS05450 d61c0ef24ee0337b352758ccb7de54ec 302 Pfam PF12833 Helix-turn-helix domain 34 114 1.6E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS05450 d61c0ef24ee0337b352758ccb7de54ec 302 SUPERFAMILY SSF46689 69 115 2.55E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS05450 d61c0ef24ee0337b352758ccb7de54ec 302 SMART SM00342 28 112 1.2E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS05450 d61c0ef24ee0337b352758ccb7de54ec 302 Gene3D G3DSA:3.20.80.10 150 302 5.3E-22 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain CVS42_RS05450 d61c0ef24ee0337b352758ccb7de54ec 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 96 112 6.2E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS05450 d61c0ef24ee0337b352758ccb7de54ec 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 81 96 6.2E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS05450 d61c0ef24ee0337b352758ccb7de54ec 302 SUPERFAMILY SSF46689 13 62 1.12E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS05450 d61c0ef24ee0337b352758ccb7de54ec 302 SMART SM00871 149 300 2.4E-22 T 29-03-2018 IPR010499 Bacterial transcription activator, effector binding CVS42_RS05450 d61c0ef24ee0337b352758ccb7de54ec 302 Gene3D G3DSA:3.90.1240.10 2 134 1.5E-25 T 29-03-2018 CVS42_RS05450 d61c0ef24ee0337b352758ccb7de54ec 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 65 108 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CVS42_RS05450 d61c0ef24ee0337b352758ccb7de54ec 302 SUPERFAMILY SSF55136 153 299 2.35E-23 T 29-03-2018 CVS42_RS05450 d61c0ef24ee0337b352758ccb7de54ec 302 Pfam PF06445 GyrI-like small molecule binding domain 153 299 3.9E-22 T 29-03-2018 IPR029442 GyrI-like small molecule binding domain CVS42_RS02010 f03086a1ba03a0b99ab1af30b2ab4289 688 Pfam PF13718 GNAT acetyltransferase 2 383 500 2.8E-18 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS02010 f03086a1ba03a0b99ab1af30b2ab4289 688 SUPERFAMILY SSF52540 150 294 1.2E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS02010 f03086a1ba03a0b99ab1af30b2ab4289 688 Pfam PF08351 Domain of unknown function (DUF1726) 63 142 1.0E-11 T 29-03-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 CVS42_RS02010 f03086a1ba03a0b99ab1af30b2ab4289 688 Pfam PF05127 Helicase 191 351 7.0E-52 T 29-03-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 CVS42_RS02010 f03086a1ba03a0b99ab1af30b2ab4289 688 Gene3D G3DSA:3.40.630.30 369 557 8.0E-15 T 29-03-2018 CVS42_RS02010 f03086a1ba03a0b99ab1af30b2ab4289 688 Gene3D G3DSA:3.40.50.300 164 336 7.7E-11 T 29-03-2018 CVS42_RS02010 f03086a1ba03a0b99ab1af30b2ab4289 688 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 17 685 49.394 T 29-03-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 CVS42_RS02010 f03086a1ba03a0b99ab1af30b2ab4289 688 SUPERFAMILY SSF55729 393 528 1.51E-11 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS17415 d7f571dd3d25a50abc46ad6afaa2bf36 400 SUPERFAMILY SSF53067 3 198 1.92E-62 T 29-03-2018 CVS42_RS17415 d7f571dd3d25a50abc46ad6afaa2bf36 400 Pfam PF00871 Acetokinase family 5 391 3.7E-164 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS17415 d7f571dd3d25a50abc46ad6afaa2bf36 400 PRINTS PR00471 Acetate kinase family signature 205 226 3.9E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS17415 d7f571dd3d25a50abc46ad6afaa2bf36 400 PRINTS PR00471 Acetate kinase family signature 5 16 3.9E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS17415 d7f571dd3d25a50abc46ad6afaa2bf36 400 PRINTS PR00471 Acetate kinase family signature 301 314 3.9E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS17415 d7f571dd3d25a50abc46ad6afaa2bf36 400 PRINTS PR00471 Acetate kinase family signature 324 340 3.9E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS17415 d7f571dd3d25a50abc46ad6afaa2bf36 400 PRINTS PR00471 Acetate kinase family signature 175 188 3.9E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS17415 d7f571dd3d25a50abc46ad6afaa2bf36 400 PRINTS PR00471 Acetate kinase family signature 379 391 3.9E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS17415 d7f571dd3d25a50abc46ad6afaa2bf36 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS17415 d7f571dd3d25a50abc46ad6afaa2bf36 400 Gene3D G3DSA:3.30.420.40 198 400 1.9E-78 T 29-03-2018 CVS42_RS17415 d7f571dd3d25a50abc46ad6afaa2bf36 400 SUPERFAMILY SSF53067 159 398 2.67E-85 T 29-03-2018 CVS42_RS17415 d7f571dd3d25a50abc46ad6afaa2bf36 400 Gene3D G3DSA:3.30.420.40 4 197 1.2E-64 T 29-03-2018 CVS42_RS17415 d7f571dd3d25a50abc46ad6afaa2bf36 400 PIRSF PIRSF000722 1 400 3.3E-143 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS17415 d7f571dd3d25a50abc46ad6afaa2bf36 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 205 222 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS17415 d7f571dd3d25a50abc46ad6afaa2bf36 400 TIGRFAM TIGR00016 ackA: acetate kinase 2 397 1.4E-172 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS17415 d7f571dd3d25a50abc46ad6afaa2bf36 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 189.272 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS17185 a5966bef04472440c0ae110f5a2fcc7d 270 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 265 1.4E-74 T 29-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CVS42_RS17185 a5966bef04472440c0ae110f5a2fcc7d 270 SUPERFAMILY SSF53335 17 266 5.78E-76 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS17185 a5966bef04472440c0ae110f5a2fcc7d 270 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 264 5.5E-86 T 29-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CVS42_RS17185 a5966bef04472440c0ae110f5a2fcc7d 270 SMART SM00650 25 198 8.5E-83 T 29-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CVS42_RS17185 a5966bef04472440c0ae110f5a2fcc7d 270 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 29-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CVS42_RS17185 a5966bef04472440c0ae110f5a2fcc7d 270 Gene3D G3DSA:3.40.50.150 2 206 1.0E-53 T 29-03-2018 CVS42_RS17185 a5966bef04472440c0ae110f5a2fcc7d 270 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 55.252 T 29-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CVS42_RS17185 a5966bef04472440c0ae110f5a2fcc7d 270 Gene3D G3DSA:1.10.8.100 207 270 7.2E-19 T 29-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 CVS42_RS04370 628f4ef0404848226a6e5c09182bf718 266 Gene3D G3DSA:1.25.40.10 69 216 6.2E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS04370 628f4ef0404848226a6e5c09182bf718 266 Pfam PF11207 Protein of unknown function (DUF2989) 20 217 8.4E-68 T 29-03-2018 IPR021372 Protein of unknown function DUF2989 CVS42_RS01165 ce4915bb1bc01c335e890fde6c334166 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 58 9.9E-26 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01165 ce4915bb1bc01c335e890fde6c334166 59 Gene3D G3DSA:3.30.1390.20 5 59 9.4E-25 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CVS42_RS01165 ce4915bb1bc01c335e890fde6c334166 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 29-03-2018 IPR018038 Ribosomal protein L30, conserved site CVS42_RS01165 ce4915bb1bc01c335e890fde6c334166 59 PIRSF PIRSF002211 1 59 5.0E-28 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01165 ce4915bb1bc01c335e890fde6c334166 59 SUPERFAMILY SSF55129 3 58 7.46E-22 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CVS42_RS01165 ce4915bb1bc01c335e890fde6c334166 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 21.548 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01165 ce4915bb1bc01c335e890fde6c334166 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 4.6E-20 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CVS42_RS05045 961f7ea514ea9e7c04069f1c76d1ca49 178 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 42 173 2.6E-39 T 29-03-2018 IPR005247 YbhB/YbcL CVS42_RS05045 961f7ea514ea9e7c04069f1c76d1ca49 178 Pfam PF01161 Phosphatidylethanolamine-binding protein 40 175 1.1E-34 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CVS42_RS05045 961f7ea514ea9e7c04069f1c76d1ca49 178 SUPERFAMILY SSF49777 23 176 3.92E-48 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CVS42_RS05045 961f7ea514ea9e7c04069f1c76d1ca49 178 Gene3D G3DSA:3.90.280.10 16 177 5.7E-48 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CVS42_RS09290 461ec1d707a8d9ef3284de766d9f5ccc 530 Gene3D G3DSA:3.40.50.20 104 200 4.4E-6 T 29-03-2018 CVS42_RS09290 461ec1d707a8d9ef3284de766d9f5ccc 530 Pfam PF02625 XdhC and CoxI family 12 73 9.9E-15 T 29-03-2018 IPR003777 XdhC- CoxI CVS42_RS09290 461ec1d707a8d9ef3284de766d9f5ccc 530 Gene3D G3DSA:3.40.50.720 201 522 1.1E-6 T 29-03-2018 CVS42_RS09290 461ec1d707a8d9ef3284de766d9f5ccc 530 TIGRFAM TIGR03309 matur_yqeB: selenium-dependent molybdenum hydroxylase system protein, YqeB family 271 526 3.0E-117 T 29-03-2018 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family CVS42_RS09290 461ec1d707a8d9ef3284de766d9f5ccc 530 Pfam PF13478 XdhC Rossmann domain 106 247 5.0E-34 T 29-03-2018 IPR027051 XdhC Rossmann domain CVS42_RS06390 c69f45e821e3f00d0c134cce7b8579d4 245 Gene3D G3DSA:3.30.70.20 65 100 1.6E-8 T 29-03-2018 CVS42_RS06390 c69f45e821e3f00d0c134cce7b8579d4 245 Pfam PF12800 4Fe-4S binding domain 133 151 0.024 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS06390 c69f45e821e3f00d0c134cce7b8579d4 245 Pfam PF12800 4Fe-4S binding domain 180 192 0.45 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS06390 c69f45e821e3f00d0c134cce7b8579d4 245 Gene3D G3DSA:3.30.70.20 189 236 0.0044 T 29-03-2018 CVS42_RS06390 c69f45e821e3f00d0c134cce7b8579d4 245 Pfam PF12838 4Fe-4S dicluster domain 56 111 4.9E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS06390 c69f45e821e3f00d0c134cce7b8579d4 245 Gene3D G3DSA:3.30.70.20 140 188 3.6E-9 T 29-03-2018 CVS42_RS06390 c69f45e821e3f00d0c134cce7b8579d4 245 SUPERFAMILY SSF54862 56 201 6.98E-26 T 29-03-2018 CVS42_RS06390 c69f45e821e3f00d0c134cce7b8579d4 245 Gene3D G3DSA:3.30.70.20 101 139 1.5E-7 T 29-03-2018 CVS42_RS06390 c69f45e821e3f00d0c134cce7b8579d4 245 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 57 68 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS06390 c69f45e821e3f00d0c134cce7b8579d4 245 Gene3D G3DSA:3.30.70.20 15 64 9.5E-6 T 29-03-2018 CVS42_RS06390 c69f45e821e3f00d0c134cce7b8579d4 245 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 4 213 4.0E-78 T 29-03-2018 IPR004494 MauM/NapG ferredoxin-type protein CVS42_RS11405 f873b833336945ab0750dccfc22dd26c 436 TIGRFAM TIGR00115 tig: trigger factor 11 413 6.8E-140 T 29-03-2018 IPR005215 Trigger factor GO:0015031 CVS42_RS11405 f873b833336945ab0750dccfc22dd26c 436 SUPERFAMILY SSF54534 89 241 7.66E-36 T 29-03-2018 CVS42_RS11405 f873b833336945ab0750dccfc22dd26c 436 Hamap MF_00303 Trigger factor [tig]. 1 419 21.058 T 29-03-2018 IPR005215 Trigger factor GO:0015031 CVS42_RS11405 f873b833336945ab0750dccfc22dd26c 436 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 9.4E-41 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CVS42_RS11405 f873b833336945ab0750dccfc22dd26c 436 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 230 1.1E-14 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CVS42_RS11405 f873b833336945ab0750dccfc22dd26c 436 Gene3D G3DSA:3.30.70.1050 1 118 7.2E-35 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CVS42_RS11405 f873b833336945ab0750dccfc22dd26c 436 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 413 1.6E-38 T 29-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CVS42_RS11405 f873b833336945ab0750dccfc22dd26c 436 Gene3D G3DSA:1.10.3120.10 211 390 9.1E-46 T 29-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CVS42_RS11405 f873b833336945ab0750dccfc22dd26c 436 SUPERFAMILY SSF102735 1 129 2.22E-38 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CVS42_RS11405 f873b833336945ab0750dccfc22dd26c 436 SUPERFAMILY SSF109998 248 430 8.37E-50 T 29-03-2018 IPR027304 Trigger factor/SurA domain CVS42_RS11405 f873b833336945ab0750dccfc22dd26c 436 PIRSF PIRSF003095 1 434 1.7E-121 T 29-03-2018 IPR005215 Trigger factor GO:0015031 CVS42_RS20110 4cacd176deda0c93564e29508735de68 137 Pfam PF03994 Domain of Unknown Function (DUF350) 18 71 2.2E-15 T 29-03-2018 IPR007140 Protein of unknown function DUF350 CVS42_RS20110 4cacd176deda0c93564e29508735de68 137 Pfam PF03994 Domain of Unknown Function (DUF350) 83 135 6.7E-12 T 29-03-2018 IPR007140 Protein of unknown function DUF350 CVS42_RS02965 35d26738575231337c5a0aafec6f1d82 718 Gene3D G3DSA:3.20.20.80 129 573 1.8E-101 T 29-03-2018 CVS42_RS02965 35d26738575231337c5a0aafec6f1d82 718 SMART SM00642 147 559 1.4E-8 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS02965 35d26738575231337c5a0aafec6f1d82 718 SUPERFAMILY SSF51011 583 676 1.44E-17 T 29-03-2018 CVS42_RS02965 35d26738575231337c5a0aafec6f1d82 718 Gene3D G3DSA:2.60.40.1180 583 712 6.1E-20 T 29-03-2018 CVS42_RS02965 35d26738575231337c5a0aafec6f1d82 718 Pfam PF00128 Alpha amylase, catalytic domain 177 518 6.2E-11 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS02965 35d26738575231337c5a0aafec6f1d82 718 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 11 96 2.3E-12 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 CVS42_RS02965 35d26738575231337c5a0aafec6f1d82 718 SUPERFAMILY SSF51445 491 565 3.85E-124 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS02965 35d26738575231337c5a0aafec6f1d82 718 SUPERFAMILY SSF51445 122 462 3.85E-124 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS02965 35d26738575231337c5a0aafec6f1d82 718 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 8 656 2.4E-254 T 29-03-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 CVS42_RS02965 35d26738575231337c5a0aafec6f1d82 718 SUPERFAMILY SSF81296 7 133 2.18E-36 T 29-03-2018 IPR014756 Immunoglobulin E-set CVS42_RS02965 35d26738575231337c5a0aafec6f1d82 718 Gene3D G3DSA:2.60.40.10 1 128 1.0E-26 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS21285 49e17626e7ae8c51af2581d96822ffce 216 Gene3D G3DSA:1.10.10.10 148 201 1.3E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS21285 49e17626e7ae8c51af2581d96822ffce 216 SUPERFAMILY SSF46785 139 206 2.45E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS21285 49e17626e7ae8c51af2581d96822ffce 216 Gene3D G3DSA:3.90.79.10 3 147 4.7E-24 T 29-03-2018 CVS42_RS21285 49e17626e7ae8c51af2581d96822ffce 216 SUPERFAMILY SSF55811 5 131 1.09E-18 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CVS42_RS09695 a13961c7d8df88f069d9fbcf3a1b34e0 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 76 1.2E-12 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CVS42_RS09695 a13961c7d8df88f069d9fbcf3a1b34e0 205 Gene3D G3DSA:1.20.1050.10 102 205 9.6E-19 T 29-03-2018 CVS42_RS09695 a13961c7d8df88f069d9fbcf3a1b34e0 205 SUPERFAMILY SSF47616 83 204 2.51E-20 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CVS42_RS09695 a13961c7d8df88f069d9fbcf3a1b34e0 205 Gene3D G3DSA:3.40.30.10 1 101 2.8E-22 T 29-03-2018 CVS42_RS09695 a13961c7d8df88f069d9fbcf3a1b34e0 205 SUPERFAMILY SSF52833 1 85 7.78E-21 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS09695 a13961c7d8df88f069d9fbcf3a1b34e0 205 Pfam PF13410 Glutathione S-transferase, C-terminal domain 134 192 3.5E-8 T 29-03-2018 CVS42_RS05465 1d5587185517428ff687967778d1aaec 353 Gene3D G3DSA:1.10.220.30 15 90 1.1E-10 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CVS42_RS05465 1d5587185517428ff687967778d1aaec 353 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 21 351 7.8E-98 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CVS42_RS05465 1d5587185517428ff687967778d1aaec 353 SUPERFAMILY SSF48029 134 344 3.4E-69 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CVS42_RS05465 1d5587185517428ff687967778d1aaec 353 Pfam PF14841 FliG middle domain 136 206 3.7E-27 T 29-03-2018 IPR032779 Flagellar motor switch protein FliG, middle domain CVS42_RS05465 1d5587185517428ff687967778d1aaec 353 PIRSF PIRSF003161 19 353 8.6E-116 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CVS42_RS05465 1d5587185517428ff687967778d1aaec 353 SUPERFAMILY SSF48029 24 136 1.83E-21 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CVS42_RS05465 1d5587185517428ff687967778d1aaec 353 Pfam PF14842 FliG N-terminal domain 24 124 2.1E-28 T 29-03-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CVS42_RS05465 1d5587185517428ff687967778d1aaec 353 Gene3D G3DSA:1.10.220.30 215 353 1.1E-32 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CVS42_RS05465 1d5587185517428ff687967778d1aaec 353 Gene3D G3DSA:1.10.220.30 93 213 7.6E-22 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CVS42_RS05465 1d5587185517428ff687967778d1aaec 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 292 318 5.8E-57 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CVS42_RS05465 1d5587185517428ff687967778d1aaec 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 5.8E-57 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CVS42_RS05465 1d5587185517428ff687967778d1aaec 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 54 80 5.8E-57 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CVS42_RS05465 1d5587185517428ff687967778d1aaec 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 25 41 5.8E-57 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CVS42_RS05465 1d5587185517428ff687967778d1aaec 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 134 157 5.8E-57 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CVS42_RS05465 1d5587185517428ff687967778d1aaec 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 268 288 5.8E-57 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CVS42_RS05465 1d5587185517428ff687967778d1aaec 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 215 240 5.8E-57 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CVS42_RS05465 1d5587185517428ff687967778d1aaec 353 Pfam PF01706 FliG C-terminal domain 238 344 7.3E-41 T 29-03-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal CVS42_RS22110 73be0ba619a52f5c3593f1445d8efb7d 139 SUPERFAMILY SSF46604 87 135 1.83E-14 T 29-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22110 73be0ba619a52f5c3593f1445d8efb7d 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 20.746 T 29-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22110 73be0ba619a52f5c3593f1445d8efb7d 139 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 87 131 4.5E-13 T 29-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22110 73be0ba619a52f5c3593f1445d8efb7d 139 Gene3D G3DSA:2.60.15.10 2 89 9.8E-28 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22110 73be0ba619a52f5c3593f1445d8efb7d 139 SUPERFAMILY SSF51344 4 85 9.42E-24 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22110 73be0ba619a52f5c3593f1445d8efb7d 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 3.0E-29 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22110 73be0ba619a52f5c3593f1445d8efb7d 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 131 4.9E-43 T 29-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22110 73be0ba619a52f5c3593f1445d8efb7d 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 3.0E-28 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22110 73be0ba619a52f5c3593f1445d8efb7d 139 Gene3D G3DSA:1.20.5.440 90 130 1.1E-12 T 29-03-2018 CVS42_RS07985 cbc97b6fb1ca183f570a3075dfa5ecbd 220 Gene3D G3DSA:1.10.443.10 5 209 2.7E-18 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS07985 cbc97b6fb1ca183f570a3075dfa5ecbd 220 SUPERFAMILY SSF56349 24 201 1.06E-15 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CVS42_RS07985 cbc97b6fb1ca183f570a3075dfa5ecbd 220 Pfam PF00589 Phage integrase family 21 200 1.8E-8 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS04125 d09cb51e38d3eba527bb22d345792ec1 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 8.9E-64 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS04125 d09cb51e38d3eba527bb22d345792ec1 172 Gene3D G3DSA:2.30.110.20 2 172 4.0E-50 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS04125 d09cb51e38d3eba527bb22d345792ec1 172 SUPERFAMILY SSF141452 3 168 1.44E-38 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS04125 d09cb51e38d3eba527bb22d345792ec1 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 2.6E-31 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS09725 a7cb762726a32c1e9b67c0c6ddc5a4ec 295 SUPERFAMILY SSF161098 17 284 7.57E-57 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS09725 a7cb762726a32c1e9b67c0c6ddc5a4ec 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 290 4.4E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS09725 a7cb762726a32c1e9b67c0c6ddc5a4ec 295 Gene3D G3DSA:1.10.3720.10 19 293 6.6E-45 T 29-03-2018 CVS42_RS03710 12a6a2e95110103b4a33e15f08dc4896 163 SUPERFAMILY SSF55729 2 151 4.79E-22 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS03710 12a6a2e95110103b4a33e15f08dc4896 163 Pfam PF00583 Acetyltransferase (GNAT) family 57 139 4.4E-8 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS03710 12a6a2e95110103b4a33e15f08dc4896 163 Gene3D G3DSA:3.40.630.30 2 152 2.8E-24 T 29-03-2018 CVS42_RS17355 45caf66318f7ad1726304b5d4b13f966 232 Gene3D G3DSA:3.40.1550.10 10 179 2.8E-23 T 29-03-2018 IPR028976 CheC-like domain CVS42_RS17355 45caf66318f7ad1726304b5d4b13f966 232 Pfam PF11813 Protein of unknown function (DUF3334) 10 232 4.1E-115 T 29-03-2018 IPR024513 Protein of unknown function DUF3334 CVS42_RS17355 45caf66318f7ad1726304b5d4b13f966 232 SUPERFAMILY SSF103039 15 178 1.28E-22 T 29-03-2018 IPR028976 CheC-like domain CVS42_RS15650 23e451d0c4a6bfd10d9169c974397941 324 Pfam PF04392 ABC transporter substrate binding protein 40 315 1.3E-7 T 29-03-2018 IPR007487 ABC transporter, substrate-binding protein CVS42_RS13715 f471a6d54822c4dbd059bfb994ca4766 366 Gene3D G3DSA:3.30.559.10 152 366 7.0E-47 T 29-03-2018 CVS42_RS13715 f471a6d54822c4dbd059bfb994ca4766 366 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 159 363 1.7E-48 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CVS42_RS13715 f471a6d54822c4dbd059bfb994ca4766 366 Gene3D G3DSA:3.90.1170.30 2 44 3.4E-11 T 29-03-2018 CVS42_RS13715 f471a6d54822c4dbd059bfb994ca4766 366 Gene3D G3DSA:3.90.1170.30 45 96 3.6E-4 T 29-03-2018 CVS42_RS13715 f471a6d54822c4dbd059bfb994ca4766 366 Pfam PF00364 Biotin-requiring enzyme 4 74 2.0E-18 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CVS42_RS13715 f471a6d54822c4dbd059bfb994ca4766 366 SUPERFAMILY SSF51230 3 87 2.75E-23 T 29-03-2018 IPR011053 Single hybrid motif CVS42_RS13715 f471a6d54822c4dbd059bfb994ca4766 366 SUPERFAMILY SSF52777 160 363 6.23E-52 T 29-03-2018 CVS42_RS13715 f471a6d54822c4dbd059bfb994ca4766 366 Pfam PF02817 e3 binding domain 112 146 1.7E-8 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CVS42_RS13715 f471a6d54822c4dbd059bfb994ca4766 366 Gene3D G3DSA:4.10.320.10 102 151 4.6E-12 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CVS42_RS13715 f471a6d54822c4dbd059bfb994ca4766 366 SUPERFAMILY SSF47005 105 149 4.19E-9 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CVS42_RS00010 9a4b2f202f45ceadf4e71f702da9af1a 453 SUPERFAMILY SSF116878 120 219 2.09E-51 T 29-03-2018 CVS42_RS00010 9a4b2f202f45ceadf4e71f702da9af1a 453 SUPERFAMILY SSF116878 378 453 2.09E-51 T 29-03-2018 CVS42_RS00010 9a4b2f202f45ceadf4e71f702da9af1a 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 1.1E-33 T 29-03-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 CVS42_RS00010 9a4b2f202f45ceadf4e71f702da9af1a 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 1.4E-23 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS00010 9a4b2f202f45ceadf4e71f702da9af1a 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 9.4E-101 T 29-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CVS42_RS00010 9a4b2f202f45ceadf4e71f702da9af1a 453 SUPERFAMILY SSF52540 203 371 8.5E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00010 9a4b2f202f45ceadf4e71f702da9af1a 453 SUPERFAMILY SSF52540 71 169 8.5E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00010 9a4b2f202f45ceadf4e71f702da9af1a 453 Gene3D G3DSA:1.20.120.430 121 280 2.7E-27 T 29-03-2018 CVS42_RS00010 9a4b2f202f45ceadf4e71f702da9af1a 453 Gene3D G3DSA:3.30.1360.120 1 120 8.7E-40 T 29-03-2018 CVS42_RS00010 9a4b2f202f45ceadf4e71f702da9af1a 453 Gene3D G3DSA:1.20.120.430 281 453 8.1E-35 T 29-03-2018 CVS42_RS00010 9a4b2f202f45ceadf4e71f702da9af1a 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 32.826 T 29-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CVS42_RS00010 9a4b2f202f45ceadf4e71f702da9af1a 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 349 1.5E-20 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CVS42_RS00010 9a4b2f202f45ceadf4e71f702da9af1a 453 Pfam PF12631 MnmE helical domain 122 450 5.6E-60 T 29-03-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 Gene3D G3DSA:3.30.390.30 575 694 1.7E-31 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 SUPERFAMILY SSF55424 578 693 1.89E-32 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 272 282 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 Gene3D G3DSA:3.50.50.60 235 394 8.0E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 Gene3D G3DSA:3.40.50.720 395 569 5.3E-29 T 29-03-2018 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 404 429 1.7E-52 T 29-03-2018 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 578 599 1.7E-52 T 29-03-2018 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 239 261 1.7E-52 T 29-03-2018 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 497 511 1.7E-52 T 29-03-2018 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 540 547 1.7E-52 T 29-03-2018 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 368 377 1.7E-52 T 29-03-2018 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 665 685 1.7E-52 T 29-03-2018 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 643 658 1.7E-52 T 29-03-2018 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 286 1.7E-52 T 29-03-2018 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 SUPERFAMILY SSF51905 233 604 2.25E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 582 686 4.9E-25 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 Pfam PF09335 SNARE associated Golgi protein 67 184 5.4E-20 T 29-03-2018 IPR032816 SNARE associated Golgi protein CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 240 259 6.4E-27 T 29-03-2018 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 404 422 6.4E-27 T 29-03-2018 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 496 512 6.4E-27 T 29-03-2018 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 365 383 6.4E-27 T 29-03-2018 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 525 547 6.4E-27 T 29-03-2018 CVS42_RS13840 903d5ec83b716804ae3277bd6cc3d60c 717 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 239 559 4.3E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS02850 04e60986c29fc4fed8bd5ceff8d5867b 441 Gene3D G3DSA:3.40.50.10070 22 174 1.7E-43 T 29-03-2018 CVS42_RS02850 04e60986c29fc4fed8bd5ceff8d5867b 441 Gene3D G3DSA:2.130.10.150 266 440 1.5E-30 T 29-03-2018 CVS42_RS02850 04e60986c29fc4fed8bd5ceff8d5867b 441 Gene3D G3DSA:2.140.10.30 175 265 1.4E-11 T 29-03-2018 CVS42_RS02850 04e60986c29fc4fed8bd5ceff8d5867b 441 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 437 3.2E-163 T 29-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CVS42_RS02850 04e60986c29fc4fed8bd5ceff8d5867b 441 Pfam PF07676 WD40-like Beta Propeller Repeat 290 325 3.4E-11 T 29-03-2018 IPR011659 WD40-like Beta Propeller CVS42_RS02850 04e60986c29fc4fed8bd5ceff8d5867b 441 Pfam PF07676 WD40-like Beta Propeller Repeat 248 282 1.3E-8 T 29-03-2018 IPR011659 WD40-like Beta Propeller CVS42_RS02850 04e60986c29fc4fed8bd5ceff8d5867b 441 Pfam PF07676 WD40-like Beta Propeller Repeat 211 238 1.2E-7 T 29-03-2018 IPR011659 WD40-like Beta Propeller CVS42_RS02850 04e60986c29fc4fed8bd5ceff8d5867b 441 SUPERFAMILY SSF52964 28 171 1.83E-43 T 29-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CVS42_RS02850 04e60986c29fc4fed8bd5ceff8d5867b 441 SUPERFAMILY SSF69304 166 438 3.66E-56 T 29-03-2018 CVS42_RS02850 04e60986c29fc4fed8bd5ceff8d5867b 441 Hamap MF_00671 Protein TolB [tolB]. 4 436 35.363 T 29-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CVS42_RS02850 04e60986c29fc4fed8bd5ceff8d5867b 441 Pfam PF04052 TolB amino-terminal domain 23 125 3.2E-36 T 29-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CVS42_RS09265 6735962582540f63b789d15d3b72d6c5 399 SUPERFAMILY SSF53686 33 345 3.4E-59 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CVS42_RS09265 6735962582540f63b789d15d3b72d6c5 399 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 41 348 1.3E-49 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CVS42_RS09265 6735962582540f63b789d15d3b72d6c5 399 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 23 392 4.8E-187 T 29-03-2018 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 CVS42_RS09265 6735962582540f63b789d15d3b72d6c5 399 Gene3D G3DSA:3.40.50.1100 182 379 8.5E-25 T 29-03-2018 CVS42_RS09265 6735962582540f63b789d15d3b72d6c5 399 TIGRFAM TIGR03528 2_3_DAP_am_ly: diaminopropionate ammonia-lyase 6 393 5.0E-186 T 29-03-2018 IPR019871 Diaminopropionate ammonia-lyase, subgroup GO:0008838 CVS42_RS09265 6735962582540f63b789d15d3b72d6c5 399 Gene3D G3DSA:3.40.50.1100 76 181 1.3E-29 T 29-03-2018 CVS42_RS20995 c8e531a47b9fa55f73ffd6dcdad193d2 457 Pfam PF04055 Radical SAM superfamily 57 228 1.7E-20 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS20995 c8e531a47b9fa55f73ffd6dcdad193d2 457 Gene3D G3DSA:3.20.20.70 41 353 4.2E-44 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS20995 c8e531a47b9fa55f73ffd6dcdad193d2 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 457 6.7E-206 T 29-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 CVS42_RS20995 c8e531a47b9fa55f73ffd6dcdad193d2 457 SMART SM00729 52 272 1.5E-49 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CVS42_RS20995 c8e531a47b9fa55f73ffd6dcdad193d2 457 Pfam PF06969 HemN C-terminal domain 363 430 8.3E-10 T 29-03-2018 IPR010723 HemN, C-terminal CVS42_RS20995 c8e531a47b9fa55f73ffd6dcdad193d2 457 SUPERFAMILY SSF102114 6 444 1.83E-139 T 29-03-2018 CVS42_RS20995 c8e531a47b9fa55f73ffd6dcdad193d2 457 PIRSF PIRSF000167 3 454 3.9E-169 T 29-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 CVS42_RS00310 0b49d5440174310166df5440f6d0a782 337 SUPERFAMILY SSF52374 5 330 4.51E-77 T 29-03-2018 CVS42_RS00310 0b49d5440174310166df5440f6d0a782 337 Gene3D G3DSA:3.40.50.620 2 203 6.8E-58 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS00310 0b49d5440174310166df5440f6d0a782 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 2.4E-20 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CVS42_RS00310 0b49d5440174310166df5440f6d0a782 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 2.4E-20 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CVS42_RS00310 0b49d5440174310166df5440f6d0a782 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 2.4E-20 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CVS42_RS00310 0b49d5440174310166df5440f6d0a782 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 197 207 2.4E-20 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CVS42_RS00310 0b49d5440174310166df5440f6d0a782 337 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS00310 0b49d5440174310166df5440f6d0a782 337 Gene3D G3DSA:1.10.240.10 204 326 1.5E-27 T 29-03-2018 CVS42_RS00310 0b49d5440174310166df5440f6d0a782 337 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 4.5E-70 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CVS42_RS00310 0b49d5440174310166df5440f6d0a782 337 Pfam PF00579 tRNA synthetases class I (W and Y) 4 285 2.3E-51 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS00755 64754ef640cf0612a8f6139c48fcc296 453 Gene3D G3DSA:3.30.420.40 1 219 2.7E-35 T 29-03-2018 CVS42_RS00755 64754ef640cf0612a8f6139c48fcc296 453 Gene3D G3DSA:3.30.420.40 220 430 1.4E-28 T 29-03-2018 CVS42_RS00755 64754ef640cf0612a8f6139c48fcc296 453 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 215 228 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CVS42_RS00755 64754ef640cf0612a8f6139c48fcc296 453 Pfam PF00012 Hsp70 protein 335 442 1.2E-5 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS00755 64754ef640cf0612a8f6139c48fcc296 453 Pfam PF00012 Hsp70 protein 131 261 3.1E-13 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS00755 64754ef640cf0612a8f6139c48fcc296 453 SUPERFAMILY SSF53067 210 278 1.34E-29 T 29-03-2018 CVS42_RS00755 64754ef640cf0612a8f6139c48fcc296 453 SUPERFAMILY SSF53067 330 449 1.34E-29 T 29-03-2018 CVS42_RS00755 64754ef640cf0612a8f6139c48fcc296 453 SUPERFAMILY SSF53067 87 205 3.88E-25 T 29-03-2018 CVS42_RS00755 64754ef640cf0612a8f6139c48fcc296 453 SUPERFAMILY SSF53067 1 43 3.88E-25 T 29-03-2018 CVS42_RS14940 4f1a3d9affef0e4aa44d3906ba314a5e 142 Gene3D G3DSA:3.40.630.30 1 77 5.0E-13 T 29-03-2018 CVS42_RS14940 4f1a3d9affef0e4aa44d3906ba314a5e 142 SUPERFAMILY SSF55729 1 137 5.32E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS14940 4f1a3d9affef0e4aa44d3906ba314a5e 142 Gene3D G3DSA:3.40.630.30 78 142 4.3E-18 T 29-03-2018 CVS42_RS14940 4f1a3d9affef0e4aa44d3906ba314a5e 142 Pfam PF13508 Acetyltransferase (GNAT) domain 47 120 2.7E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS06705 438e7bab329dd24af318044637a2613b 385 SUPERFAMILY SSF111369 52 292 7.72E-64 T 29-03-2018 CVS42_RS06705 438e7bab329dd24af318044637a2613b 385 Gene3D G3DSA:2.40.50.100 4 96 1.9E-6 T 29-03-2018 CVS42_RS06705 438e7bab329dd24af318044637a2613b 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 367 8.5E-74 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CVS42_RS06705 438e7bab329dd24af318044637a2613b 385 Gene3D G3DSA:2.40.50.100 166 344 3.3E-5 T 29-03-2018 CVS42_RS06705 438e7bab329dd24af318044637a2613b 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 287 3.9E-11 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CVS42_RS06705 438e7bab329dd24af318044637a2613b 385 Gene3D G3DSA:1.10.287.470 97 162 4.0E-11 T 29-03-2018 CVS42_RS15375 ece35807004de7b3e7675ff5f6d4a1dc 499 SUPERFAMILY SSF53254 36 209 8.37E-44 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CVS42_RS15375 ece35807004de7b3e7675ff5f6d4a1dc 499 SUPERFAMILY SSF53254 302 496 8.37E-44 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CVS42_RS15375 ece35807004de7b3e7675ff5f6d4a1dc 499 SUPERFAMILY SSF53254 247 259 8.37E-44 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CVS42_RS15375 ece35807004de7b3e7675ff5f6d4a1dc 499 Gene3D G3DSA:3.40.50.1240 46 498 1.3E-42 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CVS42_RS15375 ece35807004de7b3e7675ff5f6d4a1dc 499 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 68 207 1.9E-8 T 29-03-2018 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 CVS42_RS15375 ece35807004de7b3e7675ff5f6d4a1dc 499 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 347 466 1.5E-5 T 29-03-2018 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 CVS42_RS19905 ee1cb632b007ea367e950e4b9d07c584 300 SUPERFAMILY SSF161111 2 208 7.85E-56 T 29-03-2018 CVS42_RS19905 ee1cb632b007ea367e950e4b9d07c584 300 Gene3D G3DSA:3.30.70.1350 207 294 2.5E-22 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CVS42_RS19905 ee1cb632b007ea367e950e4b9d07c584 300 Gene3D G3DSA:1.20.1510.10 3 206 2.7E-46 T 29-03-2018 CVS42_RS19905 ee1cb632b007ea367e950e4b9d07c584 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 5 290 2.5E-71 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CVS42_RS19905 ee1cb632b007ea367e950e4b9d07c584 300 SUPERFAMILY SSF160240 211 290 2.22E-21 T 29-03-2018 CVS42_RS19905 ee1cb632b007ea367e950e4b9d07c584 300 Pfam PF01545 Cation efflux family 9 206 3.9E-47 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CVS42_RS19905 ee1cb632b007ea367e950e4b9d07c584 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 213 289 9.8E-24 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CVS42_RS12500 c7fd6e4ffdb0f5c1970393070bbc9d8b 658 SMART SM00304 327 380 8.7E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS12500 c7fd6e4ffdb0f5c1970393070bbc9d8b 658 Pfam PF02743 Cache domain 56 284 1.1E-16 T 29-03-2018 IPR033479 Double Cache domain 1 CVS42_RS12500 c7fd6e4ffdb0f5c1970393070bbc9d8b 658 Pfam PF00672 HAMP domain 327 376 2.8E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS12500 c7fd6e4ffdb0f5c1970393070bbc9d8b 658 Gene3D G3DSA:1.10.287.950 435 658 3.2E-43 T 29-03-2018 CVS42_RS12500 c7fd6e4ffdb0f5c1970393070bbc9d8b 658 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 453 622 1.0E-36 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS12500 c7fd6e4ffdb0f5c1970393070bbc9d8b 658 SUPERFAMILY SSF58104 348 657 1.7E-60 T 29-03-2018 CVS42_RS12500 c7fd6e4ffdb0f5c1970393070bbc9d8b 658 Gene3D G3DSA:3.30.450.20 173 306 1.6E-15 T 29-03-2018 CVS42_RS12500 c7fd6e4ffdb0f5c1970393070bbc9d8b 658 Gene3D G3DSA:1.10.287.1060 356 434 0.029 T 29-03-2018 CVS42_RS12500 c7fd6e4ffdb0f5c1970393070bbc9d8b 658 SMART SM00283 395 656 3.2E-46 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS04760 b09299a4570ff8f5a4c051951bc2c927 199 PIRSF PIRSF016482 1 198 1.1E-53 T 29-03-2018 IPR007445 Pilus assembly protein, PilO CVS42_RS04760 b09299a4570ff8f5a4c051951bc2c927 199 Gene3D G3DSA:1.10.287.540 58 93 7.5E-12 T 29-03-2018 CVS42_RS04760 b09299a4570ff8f5a4c051951bc2c927 199 Pfam PF04350 Pilus assembly protein, PilO 49 191 1.2E-48 T 29-03-2018 IPR007445 Pilus assembly protein, PilO CVS42_RS04760 b09299a4570ff8f5a4c051951bc2c927 199 Gene3D G3DSA:3.30.70.60 94 199 9.2E-24 T 29-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CVS42_RS19890 9145fa4a6bb0b40c336a05efae903dcb 195 SUPERFAMILY SSF50249 4 195 3.77E-58 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS19890 9145fa4a6bb0b40c336a05efae903dcb 195 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 195 1.1E-62 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CVS42_RS19890 9145fa4a6bb0b40c336a05efae903dcb 195 Pfam PF00436 Single-strand binding protein family 6 107 6.8E-43 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CVS42_RS19890 9145fa4a6bb0b40c336a05efae903dcb 195 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 38.828 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CVS42_RS19890 9145fa4a6bb0b40c336a05efae903dcb 195 Gene3D G3DSA:2.40.50.140 1 120 3.9E-46 T 29-03-2018 CVS42_RS12260 2aeac5467b91c7312871adf61bbdfad9 757 SUPERFAMILY SSF52540 6 164 1.27E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS12260 2aeac5467b91c7312871adf61bbdfad9 757 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 53 68 5.1E-5 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS12260 2aeac5467b91c7312871adf61bbdfad9 757 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.1E-5 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS12260 2aeac5467b91c7312871adf61bbdfad9 757 Pfam PF02421 Ferrous iron transport protein B 5 160 1.4E-58 T 29-03-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 CVS42_RS12260 2aeac5467b91c7312871adf61bbdfad9 757 Pfam PF07670 Nucleoside recognition 348 438 1.9E-12 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CVS42_RS12260 2aeac5467b91c7312871adf61bbdfad9 757 Pfam PF07670 Nucleoside recognition 509 691 3.2E-34 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CVS42_RS12260 2aeac5467b91c7312871adf61bbdfad9 757 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 688 2.3E-181 T 29-03-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CVS42_RS12260 2aeac5467b91c7312871adf61bbdfad9 757 Pfam PF07664 Ferrous iron transport protein B C terminus 451 503 1.4E-19 T 29-03-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CVS42_RS12260 2aeac5467b91c7312871adf61bbdfad9 757 Gene3D G3DSA:3.40.50.300 2 289 4.8E-31 T 29-03-2018 CVS42_RS14170 d18e95553e4f2c90efc26131d1586df9 189 Pfam PF07509 Protein of unknown function (DUF1523) 19 181 1.6E-56 T 29-03-2018 IPR011088 Bacteriophage phiNM3, A0EWY4 CVS42_RS01450 8a039f4245d0f07e6ccaa0e62e89b0a0 165 SUPERFAMILY SSF55729 3 158 5.32E-41 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS01450 8a039f4245d0f07e6ccaa0e62e89b0a0 165 Gene3D G3DSA:3.40.630.30 1 164 8.2E-40 T 29-03-2018 CVS42_RS01450 8a039f4245d0f07e6ccaa0e62e89b0a0 165 Pfam PF00583 Acetyltransferase (GNAT) family 40 134 1.6E-19 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS18095 aec3ae2b7fad3e05a69613c9b1fa0033 128 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS18095 aec3ae2b7fad3e05a69613c9b1fa0033 128 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 1.0E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS18095 aec3ae2b7fad3e05a69613c9b1fa0033 128 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 1.7E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS18095 aec3ae2b7fad3e05a69613c9b1fa0033 128 PRINTS PR00813 Bacterial general secretion pathway protein G signature 43 61 1.1E-7 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CVS42_RS18095 aec3ae2b7fad3e05a69613c9b1fa0033 128 PRINTS PR00813 Bacterial general secretion pathway protein G signature 7 32 1.1E-7 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CVS42_RS18095 aec3ae2b7fad3e05a69613c9b1fa0033 128 Gene3D G3DSA:3.30.700.10 9 128 7.5E-19 T 29-03-2018 CVS42_RS18095 aec3ae2b7fad3e05a69613c9b1fa0033 128 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 29 115 1.5E-18 T 29-03-2018 IPR031982 Type IV minor pilin ComP CVS42_RS18095 aec3ae2b7fad3e05a69613c9b1fa0033 128 SUPERFAMILY SSF54523 9 107 6.43E-17 T 29-03-2018 CVS42_RS10895 e6c0f869140de32bcdfffb7edf6d715e 284 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 277 2.1E-34 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CVS42_RS10895 e6c0f869140de32bcdfffb7edf6d715e 284 Gene3D G3DSA:1.10.12.10 237 257 6.3E-6 T 29-03-2018 IPR014748 Crontonase, C-terminal CVS42_RS10895 e6c0f869140de32bcdfffb7edf6d715e 284 Gene3D G3DSA:1.10.12.10 258 277 1.6E-4 T 29-03-2018 IPR014748 Crontonase, C-terminal CVS42_RS10895 e6c0f869140de32bcdfffb7edf6d715e 284 Gene3D G3DSA:3.90.226.10 18 236 4.4E-49 T 29-03-2018 CVS42_RS10895 e6c0f869140de32bcdfffb7edf6d715e 284 SUPERFAMILY SSF52096 16 279 1.9E-66 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS18725 0f2e18ed811f518d5a48ae460b87e10e 568 Pfam PF00437 Type II/IV secretion system protein 191 458 2.8E-92 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CVS42_RS18725 0f2e18ed811f518d5a48ae460b87e10e 568 SUPERFAMILY SSF160246 5 141 1.78E-30 T 29-03-2018 CVS42_RS18725 0f2e18ed811f518d5a48ae460b87e10e 568 Gene3D G3DSA:1.10.8.10 17 151 0.021 T 29-03-2018 CVS42_RS18725 0f2e18ed811f518d5a48ae460b87e10e 568 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 9 567 4.3E-270 T 29-03-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 CVS42_RS18725 0f2e18ed811f518d5a48ae460b87e10e 568 Gene3D G3DSA:3.30.450.90 152 291 8.6E-47 T 29-03-2018 CVS42_RS18725 0f2e18ed811f518d5a48ae460b87e10e 568 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 386 400 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CVS42_RS18725 0f2e18ed811f518d5a48ae460b87e10e 568 SUPERFAMILY SSF52540 164 566 1.29E-101 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS18725 0f2e18ed811f518d5a48ae460b87e10e 568 Gene3D G3DSA:3.40.50.300 292 568 8.3E-67 T 29-03-2018 CVS42_RS18725 0f2e18ed811f518d5a48ae460b87e10e 568 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 146 4.6E-15 T 29-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 CVS42_RS09260 c36adf2d4a401bf85596b84c547a4d8e 395 Gene3D G3DSA:3.40.50.1370 7 176 3.5E-32 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS09260 c36adf2d4a401bf85596b84c547a4d8e 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 322 331 2.7E-8 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS09260 c36adf2d4a401bf85596b84c547a4d8e 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 340 363 2.7E-8 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS09260 c36adf2d4a401bf85596b84c547a4d8e 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 66 85 2.7E-8 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS09260 c36adf2d4a401bf85596b84c547a4d8e 395 Gene3D G3DSA:3.40.50.1370 177 361 7.1E-37 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS09260 c36adf2d4a401bf85596b84c547a4d8e 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 163 180 3.0E-7 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS09260 c36adf2d4a401bf85596b84c547a4d8e 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 56 78 3.0E-7 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS09260 c36adf2d4a401bf85596b84c547a4d8e 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 3.0E-7 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS09260 c36adf2d4a401bf85596b84c547a4d8e 395 SUPERFAMILY SSF53671 18 373 1.96E-57 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS09260 c36adf2d4a401bf85596b84c547a4d8e 395 TIGRFAM TIGR03316 ygeW: knotted carbamoyltransferase YgeW 5 393 5.9E-201 T 29-03-2018 IPR017702 Putative carbamoyltransferase YgeW CVS42_RS09260 c36adf2d4a401bf85596b84c547a4d8e 395 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 186 373 7.5E-42 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CVS42_RS09260 c36adf2d4a401bf85596b84c547a4d8e 395 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 21 177 3.4E-24 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CVS42_RS20010 18695dce55268be56e0195110fb51557 155 Pfam PF05433 Glycine zipper 2TM domain 62 103 1.2E-7 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CVS42_RS10395 8b9c5cc1a236804bfd3479b6759b16c4 1304 Pfam PF11898 Domain of unknown function (DUF3418) 718 1302 4.8E-235 T 29-03-2018 IPR024590 RNA helicase HrpA, C-terminal CVS42_RS10395 8b9c5cc1a236804bfd3479b6759b16c4 1304 SMART SM00382 87 372 6.4E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS10395 8b9c5cc1a236804bfd3479b6759b16c4 1304 Pfam PF00270 DEAD/DEAH box helicase 77 228 1.2E-9 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CVS42_RS10395 8b9c5cc1a236804bfd3479b6759b16c4 1304 Pfam PF04408 Helicase associated domain (HA2) 469 563 7.9E-16 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 CVS42_RS10395 8b9c5cc1a236804bfd3479b6759b16c4 1304 SMART SM00490 306 406 1.4E-15 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS10395 8b9c5cc1a236804bfd3479b6759b16c4 1304 Gene3D G3DSA:3.40.50.300 248 425 4.6E-45 T 29-03-2018 CVS42_RS10395 8b9c5cc1a236804bfd3479b6759b16c4 1304 Gene3D G3DSA:3.40.50.300 71 230 1.5E-32 T 29-03-2018 CVS42_RS10395 8b9c5cc1a236804bfd3479b6759b16c4 1304 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 629 705 4.9E-19 T 29-03-2018 IPR011709 Domain of unknown function DUF1605 CVS42_RS10395 8b9c5cc1a236804bfd3479b6759b16c4 1304 SUPERFAMILY SSF52540 69 573 1.12E-111 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS10395 8b9c5cc1a236804bfd3479b6759b16c4 1304 SMART SM00847 466 565 3.1E-34 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 CVS42_RS10395 8b9c5cc1a236804bfd3479b6759b16c4 1304 Pfam PF00271 Helicase conserved C-terminal domain 288 405 2.9E-11 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS10395 8b9c5cc1a236804bfd3479b6759b16c4 1304 SMART SM00487 70 254 2.4E-32 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS10395 8b9c5cc1a236804bfd3479b6759b16c4 1304 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 10 1302 0.0 T 29-03-2018 IPR010222 RNA helicase HrpA GO:0004004 CVS42_RS16290 0a1a734ee4a9c0db318062c607715611 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 44 114 1.7E-9 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CVS42_RS16290 0a1a734ee4a9c0db318062c607715611 407 Gene3D G3DSA:2.40.30.10 137 256 3.7E-32 T 29-03-2018 CVS42_RS16290 0a1a734ee4a9c0db318062c607715611 407 Gene3D G3DSA:3.40.50.80 257 401 1.5E-29 T 29-03-2018 CVS42_RS16290 0a1a734ee4a9c0db318062c607715611 407 Gene3D G3DSA:3.10.20.30 29 136 3.7E-20 T 29-03-2018 IPR012675 Beta-grasp domain CVS42_RS16290 0a1a734ee4a9c0db318062c607715611 407 PIRSF PIRSF000044 1 407 6.3E-219 T 29-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CVS42_RS16290 0a1a734ee4a9c0db318062c607715611 407 SUPERFAMILY SSF54292 40 124 2.28E-21 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CVS42_RS16290 0a1a734ee4a9c0db318062c607715611 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 1.3E-9 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CVS42_RS16290 0a1a734ee4a9c0db318062c607715611 407 SUPERFAMILY SSF52343 257 402 6.81E-36 T 29-03-2018 CVS42_RS16290 0a1a734ee4a9c0db318062c607715611 407 SUPERFAMILY SSF63380 105 272 1.78E-35 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CVS42_RS16290 0a1a734ee4a9c0db318062c607715611 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 6.0E-225 T 29-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CVS42_RS16290 0a1a734ee4a9c0db318062c607715611 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.358 T 29-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CVS42_RS16290 0a1a734ee4a9c0db318062c607715611 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 9.7E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS16290 0a1a734ee4a9c0db318062c607715611 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 9.7E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS16290 0a1a734ee4a9c0db318062c607715611 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 9.7E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS16290 0a1a734ee4a9c0db318062c607715611 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 9.7E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS16290 0a1a734ee4a9c0db318062c607715611 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 2.2E-17 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CVS42_RS01135 7be89304107cc518961f30dfb438cdee 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 5.1E-40 T 29-03-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01135 7be89304107cc518961f30dfb438cdee 179 Gene3D G3DSA:3.30.1440.10 1 179 5.6E-80 T 29-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01135 7be89304107cc518961f30dfb438cdee 179 Pfam PF00281 Ribosomal protein L5 25 80 2.0E-28 T 29-03-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01135 7be89304107cc518961f30dfb438cdee 179 SUPERFAMILY SSF55282 4 179 3.3E-78 T 29-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01135 7be89304107cc518961f30dfb438cdee 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 29-03-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01135 7be89304107cc518961f30dfb438cdee 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.597 T 29-03-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01135 7be89304107cc518961f30dfb438cdee 179 PIRSF PIRSF002161 1 179 9.6E-66 T 29-03-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS06870 9495ed30b37c24465a6cd96ab21d1f57 185 Pfam PF05962 HutD 8 177 9.7E-42 T 29-03-2018 IPR010282 Uncharacterised protein family HutD/Ves CVS42_RS06870 9495ed30b37c24465a6cd96ab21d1f57 185 SUPERFAMILY SSF51182 2 182 7.71E-41 T 29-03-2018 IPR011051 RmlC-like cupin domain CVS42_RS06870 9495ed30b37c24465a6cd96ab21d1f57 185 Gene3D G3DSA:2.60.120.10 7 106 1.2E-25 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS06870 9495ed30b37c24465a6cd96ab21d1f57 185 Gene3D G3DSA:2.60.120.10 107 183 6.0E-5 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS15460 a1db462769a07faa50d8f03185abdce8 373 SMART SM00267 189 363 4.2E-59 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS15460 a1db462769a07faa50d8f03185abdce8 373 Pfam PF00990 Diguanylate cyclase, GGDEF domain 201 358 4.5E-44 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS15460 a1db462769a07faa50d8f03185abdce8 373 SUPERFAMILY SSF55073 205 362 6.83E-47 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS15460 a1db462769a07faa50d8f03185abdce8 373 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 198 362 5.7E-45 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS15460 a1db462769a07faa50d8f03185abdce8 373 Gene3D G3DSA:3.30.70.270 191 364 3.3E-52 T 29-03-2018 CVS42_RS05885 29e368143fdbb8415c8a142713916f6e 141 TIGRFAM TIGR02513 type_III_yscB: type III secretion system chaperone, YscB family 2 141 5.9E-45 T 29-03-2018 IPR013353 Type III secretion system chaperone YscB CVS42_RS05885 29e368143fdbb8415c8a142713916f6e 141 SUPERFAMILY SSF69635 2 127 3.57E-47 T 29-03-2018 CVS42_RS05885 29e368143fdbb8415c8a142713916f6e 141 Pfam PF05932 Tir chaperone protein (CesT) family 3 121 4.7E-23 T 29-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 CVS42_RS05885 29e368143fdbb8415c8a142713916f6e 141 Gene3D G3DSA:3.30.1460.10 1 137 1.1E-22 T 29-03-2018 CVS42_RS17510 57d1d4f8c71ae529d6e33bb12ffb9406 319 Pfam PF03466 LysR substrate binding domain 91 290 2.0E-43 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS17510 57d1d4f8c71ae529d6e33bb12ffb9406 319 Gene3D G3DSA:3.40.190.10 90 180 2.2E-21 T 29-03-2018 CVS42_RS17510 57d1d4f8c71ae529d6e33bb12ffb9406 319 Gene3D G3DSA:1.10.10.10 1 83 1.0E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS17510 57d1d4f8c71ae529d6e33bb12ffb9406 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 64 3.7E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS17510 57d1d4f8c71ae529d6e33bb12ffb9406 319 Gene3D G3DSA:3.40.190.10 181 267 5.0E-21 T 29-03-2018 CVS42_RS17510 57d1d4f8c71ae529d6e33bb12ffb9406 319 SUPERFAMILY SSF53850 92 299 1.17E-43 T 29-03-2018 CVS42_RS17510 57d1d4f8c71ae529d6e33bb12ffb9406 319 SUPERFAMILY SSF46785 2 112 1.51E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS17510 57d1d4f8c71ae529d6e33bb12ffb9406 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS17510 57d1d4f8c71ae529d6e33bb12ffb9406 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS17510 57d1d4f8c71ae529d6e33bb12ffb9406 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS05445 bbe43daca2fc542f1c3b3694281a2ef1 583 Pfam PF07969 Amidohydrolase family 74 580 2.5E-66 T 29-03-2018 IPR013108 Amidohydrolase 3 CVS42_RS05445 bbe43daca2fc542f1c3b3694281a2ef1 583 Gene3D G3DSA:3.20.20.140 211 523 6.0E-41 T 29-03-2018 CVS42_RS05445 bbe43daca2fc542f1c3b3694281a2ef1 583 Gene3D G3DSA:2.30.40.10 524 583 3.4E-12 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS05445 bbe43daca2fc542f1c3b3694281a2ef1 583 SUPERFAMILY SSF51556 83 104 3.64E-31 T 29-03-2018 IPR032466 Metal-dependent hydrolase CVS42_RS05445 bbe43daca2fc542f1c3b3694281a2ef1 583 SUPERFAMILY SSF51556 223 540 3.64E-31 T 29-03-2018 IPR032466 Metal-dependent hydrolase CVS42_RS05445 bbe43daca2fc542f1c3b3694281a2ef1 583 SUPERFAMILY SSF51338 539 582 2.46E-21 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS05445 bbe43daca2fc542f1c3b3694281a2ef1 583 SUPERFAMILY SSF51338 19 84 2.46E-21 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS05445 bbe43daca2fc542f1c3b3694281a2ef1 583 Gene3D G3DSA:2.30.40.10 12 128 2.5E-21 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 Gene3D G3DSA:3.40.50.300 417 634 5.0E-54 T 29-03-2018 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 PRINTS PR00906 SecA protein signature 339 361 1.7E-73 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 PRINTS PR00906 SecA protein signature 101 115 1.7E-73 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 PRINTS PR00906 SecA protein signature 413 426 1.7E-73 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 PRINTS PR00906 SecA protein signature 63 87 1.7E-73 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 PRINTS PR00906 SecA protein signature 376 393 1.7E-73 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 PRINTS PR00906 SecA protein signature 170 190 1.7E-73 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 PRINTS PR00906 SecA protein signature 117 127 1.7E-73 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 ProSitePatterns PS01312 SecA family signature. 500 515 - T 29-03-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 SUPERFAMILY SSF81886 882 894 1.24E-83 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 SUPERFAMILY SSF81886 620 840 1.24E-83 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 Gene3D G3DSA:1.10.3060.10 635 733 2.7E-30 T 29-03-2018 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.025 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 Pfam PF07517 SecA DEAD-like domain 7 402 1.8E-133 T 29-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 SUPERFAMILY SSF81767 227 368 6.28E-43 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 SUPERFAMILY SSF52540 368 415 1.28E-84 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 SUPERFAMILY SSF52540 6 228 1.28E-84 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 Pfam PF02810 SEC-C motif 886 904 1.1E-10 T 29-03-2018 IPR004027 SEC-C motif CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 Gene3D G3DSA:3.40.50.300 9 266 3.2E-59 T 29-03-2018 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 Gene3D G3DSA:3.40.50.300 306 416 5.2E-8 T 29-03-2018 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 Pfam PF01043 SecA preprotein cross-linking domain 232 358 8.5E-37 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 SUPERFAMILY SSF52540 417 618 6.19E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 Gene3D G3DSA:3.10.450.50 734 906 4.8E-54 T 29-03-2018 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 SMART SM00958 228 358 2.3E-81 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 Pfam PF07516 SecA Wing and Scaffold domain 617 830 3.5E-70 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CVS42_RS18760 ef54b6931250641c5d3c70de691cda1b 906 SMART SM00957 6 402 0.0 T 29-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CVS42_RS12365 a02695f3a13e9584247b3ae2f6bd68bd 510 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 440 5.6E-142 T 29-03-2018 IPR002823 Protein of unknown function DUF112, transmembrane CVS42_RS17340 dce09cb1ca01f5d8211dff9e9af180b7 454 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 451 5.8E-91 T 29-03-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 CVS42_RS17340 dce09cb1ca01f5d8211dff9e9af180b7 454 SMART SM00471 53 247 1.5E-7 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS17340 dce09cb1ca01f5d8211dff9e9af180b7 454 SUPERFAMILY SSF109604 24 117 7.71E-51 T 29-03-2018 CVS42_RS17340 dce09cb1ca01f5d8211dff9e9af180b7 454 SUPERFAMILY SSF109604 434 449 7.71E-51 T 29-03-2018 CVS42_RS17340 dce09cb1ca01f5d8211dff9e9af180b7 454 SUPERFAMILY SSF109604 148 181 7.71E-51 T 29-03-2018 CVS42_RS17340 dce09cb1ca01f5d8211dff9e9af180b7 454 SUPERFAMILY SSF109604 216 383 7.71E-51 T 29-03-2018 CVS42_RS17340 dce09cb1ca01f5d8211dff9e9af180b7 454 Pfam PF01966 HD domain 57 115 1.9E-8 T 29-03-2018 IPR006674 HD domain CVS42_RS17340 dce09cb1ca01f5d8211dff9e9af180b7 454 Gene3D G3DSA:1.10.3210.10 4 227 1.3E-44 T 29-03-2018 CVS42_RS17340 dce09cb1ca01f5d8211dff9e9af180b7 454 Pfam PF13286 Phosphohydrolase-associated domain 418 449 6.2E-5 T 29-03-2018 IPR026875 Phosphohydrolase-associated domain CVS42_RS17340 dce09cb1ca01f5d8211dff9e9af180b7 454 Gene3D G3DSA:1.10.3410.10 228 341 2.5E-18 T 29-03-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain CVS42_RS07230 823243e1dfc3348c552aacb671ffb28e 517 Gene3D G3DSA:3.40.50.10600 4 131 2.4E-31 T 29-03-2018 CVS42_RS07230 823243e1dfc3348c552aacb671ffb28e 517 SUPERFAMILY SSF55785 22 115 1.66E-29 T 29-03-2018 IPR000014 PAS domain CVS42_RS07230 823243e1dfc3348c552aacb671ffb28e 517 Gene3D G3DSA:1.10.287.950 201 298 2.0E-5 T 29-03-2018 CVS42_RS07230 823243e1dfc3348c552aacb671ffb28e 517 SMART SM00283 256 517 1.2E-47 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS07230 823243e1dfc3348c552aacb671ffb28e 517 Gene3D G3DSA:1.10.287.950 299 517 3.0E-46 T 29-03-2018 CVS42_RS07230 823243e1dfc3348c552aacb671ffb28e 517 SMART SM00091 9 76 0.0058 T 29-03-2018 IPR000014 PAS domain CVS42_RS07230 823243e1dfc3348c552aacb671ffb28e 517 Pfam PF08447 PAS fold 32 115 2.1E-19 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CVS42_RS07230 823243e1dfc3348c552aacb671ffb28e 517 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 484 2.3E-37 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS07230 823243e1dfc3348c552aacb671ffb28e 517 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 114 2.9E-15 T 29-03-2018 IPR000014 PAS domain CVS42_RS07230 823243e1dfc3348c552aacb671ffb28e 517 SUPERFAMILY SSF58104 245 516 8.11E-69 T 29-03-2018 CVS42_RS12410 5e695f17449be4ab5e84cd024f07b7f7 249 Gene3D G3DSA:3.90.550.10 1 249 6.3E-55 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS12410 5e695f17449be4ab5e84cd024f07b7f7 249 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.46 T 29-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CVS42_RS12410 5e695f17449be4ab5e84cd024f07b7f7 249 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 2.4E-121 T 29-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CVS42_RS12410 5e695f17449be4ab5e84cd024f07b7f7 249 Pfam PF02348 Cytidylyltransferase 4 221 4.1E-69 T 29-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CVS42_RS12410 5e695f17449be4ab5e84cd024f07b7f7 249 SUPERFAMILY SSF53448 3 247 1.73E-67 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS19650 e49614eb040fe21c6ec33a3f665f153f 199 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 143 171 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CVS42_RS19650 e49614eb040fe21c6ec33a3f665f153f 199 Pfam PF12464 Maltose acetyltransferase 12 62 5.9E-14 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CVS42_RS19650 e49614eb040fe21c6ec33a3f665f153f 199 SUPERFAMILY SSF51161 9 190 1.39E-52 T 29-03-2018 IPR011004 Trimeric LpxA-like CVS42_RS19650 e49614eb040fe21c6ec33a3f665f153f 199 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 134 169 1.5E-10 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS19650 e49614eb040fe21c6ec33a3f665f153f 199 Gene3D G3DSA:2.160.10.10 2 197 9.4E-51 T 29-03-2018 CVS42_RS19650 e49614eb040fe21c6ec33a3f665f153f 199 SMART SM01266 10 63 3.8E-17 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CVS42_RS05860 7f6374715b50214d255dc374f131de12 147 SUPERFAMILY SSF69635 6 142 5.49E-33 T 29-03-2018 CVS42_RS05860 7f6374715b50214d255dc374f131de12 147 Gene3D G3DSA:3.30.1460.10 47 130 9.7E-13 T 29-03-2018 CVS42_RS05860 7f6374715b50214d255dc374f131de12 147 Pfam PF05932 Tir chaperone protein (CesT) family 9 126 8.5E-19 T 29-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 CVS42_RS05860 7f6374715b50214d255dc374f131de12 147 Gene3D G3DSA:1.10.287.390 7 39 4.4E-13 T 29-03-2018 CVS42_RS16015 49212f0a0e64894c9d2fd83916396466 339 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 7 328 1.3E-117 T 29-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CVS42_RS16015 49212f0a0e64894c9d2fd83916396466 339 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 2.9E-9 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS16015 49212f0a0e64894c9d2fd83916396466 339 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 221 253 1.8E-4 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS16015 49212f0a0e64894c9d2fd83916396466 339 Gene3D G3DSA:2.160.10.10 90 132 9.1E-11 T 29-03-2018 CVS42_RS16015 49212f0a0e64894c9d2fd83916396466 339 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 1.7E-24 T 29-03-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 CVS42_RS16015 49212f0a0e64894c9d2fd83916396466 339 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 8 325 35.098 T 29-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CVS42_RS16015 49212f0a0e64894c9d2fd83916396466 339 SUPERFAMILY SSF51161 31 315 3.46E-87 T 29-03-2018 IPR011004 Trimeric LpxA-like CVS42_RS16015 49212f0a0e64894c9d2fd83916396466 339 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 105 133 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CVS42_RS16015 49212f0a0e64894c9d2fd83916396466 339 Gene3D G3DSA:2.160.10.10 133 308 1.2E-43 T 29-03-2018 CVS42_RS04475 86c22c1508d2274bc4bd7811956ad8d9 511 SUPERFAMILY SSF103190 69 190 1.33E-9 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CVS42_RS04475 86c22c1508d2274bc4bd7811956ad8d9 511 Pfam PF02743 Cache domain 54 267 1.6E-20 T 29-03-2018 IPR033479 Double Cache domain 1 CVS42_RS04475 86c22c1508d2274bc4bd7811956ad8d9 511 SMART SM00267 348 511 2.0E-41 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS04475 86c22c1508d2274bc4bd7811956ad8d9 511 Gene3D G3DSA:3.30.70.270 351 511 3.3E-43 T 29-03-2018 CVS42_RS04475 86c22c1508d2274bc4bd7811956ad8d9 511 Pfam PF00990 Diguanylate cyclase, GGDEF domain 359 507 2.0E-36 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS04475 86c22c1508d2274bc4bd7811956ad8d9 511 SUPERFAMILY SSF55073 363 509 2.59E-37 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS04475 86c22c1508d2274bc4bd7811956ad8d9 511 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 357 509 7.1E-38 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS04475 86c22c1508d2274bc4bd7811956ad8d9 511 Gene3D G3DSA:3.30.450.20 172 276 4.5E-10 T 29-03-2018 CVS42_RS04475 86c22c1508d2274bc4bd7811956ad8d9 511 Gene3D G3DSA:3.30.450.20 37 171 2.0E-19 T 29-03-2018 CVS42_RS01410 f732f4a58de3787d949a601c658cfbc4 249 Pfam PF03280 Proteobacterial lipase chaperone protein 57 230 4.4E-18 T 29-03-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 CVS42_RS01410 f732f4a58de3787d949a601c658cfbc4 249 SUPERFAMILY SSF158855 28 241 6.67E-38 T 29-03-2018 CVS42_RS19965 ff8e7f444e0407dfe97bfea3b4b04ae7 462 Gene3D G3DSA:1.20.144.10 158 342 2.3E-21 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CVS42_RS19965 ff8e7f444e0407dfe97bfea3b4b04ae7 462 SMART SM00014 221 334 4.5E-16 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CVS42_RS19965 ff8e7f444e0407dfe97bfea3b4b04ae7 462 Gene3D G3DSA:3.90.79.10 26 157 9.9E-18 T 29-03-2018 CVS42_RS19965 ff8e7f444e0407dfe97bfea3b4b04ae7 462 ProSitePatterns PS00893 Nudix box signature. 55 76 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CVS42_RS19965 ff8e7f444e0407dfe97bfea3b4b04ae7 462 SUPERFAMILY SSF48317 166 334 4.06E-24 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CVS42_RS19965 ff8e7f444e0407dfe97bfea3b4b04ae7 462 SUPERFAMILY SSF55811 26 152 3.52E-19 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CVS42_RS19965 ff8e7f444e0407dfe97bfea3b4b04ae7 462 Pfam PF01569 PAP2 superfamily 224 338 1.6E-21 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CVS42_RS19965 ff8e7f444e0407dfe97bfea3b4b04ae7 462 PRINTS PR00502 NUDIX hydrolase family signature 50 64 2.2E-5 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CVS42_RS19965 ff8e7f444e0407dfe97bfea3b4b04ae7 462 PRINTS PR00502 NUDIX hydrolase family signature 64 79 2.2E-5 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CVS42_RS19965 ff8e7f444e0407dfe97bfea3b4b04ae7 462 Pfam PF00293 NUDIX domain 28 134 4.4E-12 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CVS42_RS13355 3873f8a386cc6dafdcbc068a8e20174f 465 PRINTS PR00113 Alkaline phosphatase signature 132 152 2.4E-42 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CVS42_RS13355 3873f8a386cc6dafdcbc068a8e20174f 465 PRINTS PR00113 Alkaline phosphatase signature 34 54 2.4E-42 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CVS42_RS13355 3873f8a386cc6dafdcbc068a8e20174f 465 PRINTS PR00113 Alkaline phosphatase signature 84 99 2.4E-42 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CVS42_RS13355 3873f8a386cc6dafdcbc068a8e20174f 465 PRINTS PR00113 Alkaline phosphatase signature 186 196 2.4E-42 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CVS42_RS13355 3873f8a386cc6dafdcbc068a8e20174f 465 PRINTS PR00113 Alkaline phosphatase signature 261 290 2.4E-42 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CVS42_RS13355 3873f8a386cc6dafdcbc068a8e20174f 465 SMART SM00098 35 465 3.3E-100 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CVS42_RS13355 3873f8a386cc6dafdcbc068a8e20174f 465 Pfam PF00245 Alkaline phosphatase 36 465 3.7E-105 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CVS42_RS13355 3873f8a386cc6dafdcbc068a8e20174f 465 SUPERFAMILY SSF53649 30 465 3.45E-128 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CVS42_RS13355 3873f8a386cc6dafdcbc068a8e20174f 465 Gene3D G3DSA:3.40.720.10 14 465 3.3E-132 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CVS42_RS06300 a99a125840c58ba3e53207018c2796ee 162 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 5.0E-50 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 CVS42_RS06300 a99a125840c58ba3e53207018c2796ee 162 Gene3D G3DSA:2.40.280.10 15 134 1.6E-44 T 29-03-2018 IPR023620 Small protein B CVS42_RS06300 a99a125840c58ba3e53207018c2796ee 162 Pfam PF01668 SmpB protein 15 158 2.8E-56 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 CVS42_RS06300 a99a125840c58ba3e53207018c2796ee 162 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 29-03-2018 IPR020081 SsrA-binding protein, conserved site CVS42_RS06300 a99a125840c58ba3e53207018c2796ee 162 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 7.3E-54 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 CVS42_RS06300 a99a125840c58ba3e53207018c2796ee 162 SUPERFAMILY SSF74982 8 139 1.2E-48 T 29-03-2018 IPR023620 Small protein B CVS42_RS06300 a99a125840c58ba3e53207018c2796ee 162 Hamap MF_00023 SsrA-binding protein [smpB]. 1 162 70.867 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 CVS42_RS20515 d506bb13a2d8bd8dadbdaec16d59aaac 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.1E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS20515 d506bb13a2d8bd8dadbdaec16d59aaac 300 Pfam PF03466 LysR substrate binding domain 87 290 4.3E-46 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS20515 d506bb13a2d8bd8dadbdaec16d59aaac 300 Gene3D G3DSA:3.40.190.10 88 176 6.8E-12 T 29-03-2018 CVS42_RS20515 d506bb13a2d8bd8dadbdaec16d59aaac 300 SUPERFAMILY SSF53850 87 295 1.72E-47 T 29-03-2018 CVS42_RS20515 d506bb13a2d8bd8dadbdaec16d59aaac 300 SUPERFAMILY SSF46785 1 86 1.33E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20515 d506bb13a2d8bd8dadbdaec16d59aaac 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.9E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS20515 d506bb13a2d8bd8dadbdaec16d59aaac 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.9E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS20515 d506bb13a2d8bd8dadbdaec16d59aaac 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.9E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS20515 d506bb13a2d8bd8dadbdaec16d59aaac 300 Gene3D G3DSA:1.10.10.10 1 83 7.3E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20515 d506bb13a2d8bd8dadbdaec16d59aaac 300 Gene3D G3DSA:3.40.190.10 177 262 1.4E-27 T 29-03-2018 CVS42_RS21605 a067cf5604781a445e502ad5c44e6079 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 71 21.105 T 29-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS21605 a067cf5604781a445e502ad5c44e6079 78 Pfam PF00830 Ribosomal L28 family 3 61 9.4E-26 T 29-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS21605 a067cf5604781a445e502ad5c44e6079 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.0E-28 T 29-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS21605 a067cf5604781a445e502ad5c44e6079 78 Gene3D G3DSA:2.30.170.40 2 75 1.7E-26 T 29-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS21605 a067cf5604781a445e502ad5c44e6079 78 SUPERFAMILY SSF143800 2 77 3.34E-29 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS03410 996d65f8ab261649fa91c30d178d3250 399 PRINTS PR00471 Acetate kinase family signature 301 314 3.1E-49 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS03410 996d65f8ab261649fa91c30d178d3250 399 PRINTS PR00471 Acetate kinase family signature 324 340 3.1E-49 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS03410 996d65f8ab261649fa91c30d178d3250 399 PRINTS PR00471 Acetate kinase family signature 379 391 3.1E-49 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS03410 996d65f8ab261649fa91c30d178d3250 399 PRINTS PR00471 Acetate kinase family signature 5 16 3.1E-49 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS03410 996d65f8ab261649fa91c30d178d3250 399 PRINTS PR00471 Acetate kinase family signature 175 188 3.1E-49 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS03410 996d65f8ab261649fa91c30d178d3250 399 PRINTS PR00471 Acetate kinase family signature 205 226 3.1E-49 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS03410 996d65f8ab261649fa91c30d178d3250 399 SUPERFAMILY SSF53067 159 397 7.96E-87 T 29-03-2018 CVS42_RS03410 996d65f8ab261649fa91c30d178d3250 399 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS03410 996d65f8ab261649fa91c30d178d3250 399 Pfam PF00871 Acetokinase family 5 392 4.8E-160 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS03410 996d65f8ab261649fa91c30d178d3250 399 SUPERFAMILY SSF53067 3 198 1.04E-62 T 29-03-2018 CVS42_RS03410 996d65f8ab261649fa91c30d178d3250 399 Gene3D G3DSA:3.30.420.40 198 399 4.7E-79 T 29-03-2018 CVS42_RS03410 996d65f8ab261649fa91c30d178d3250 399 Hamap MF_00020 Acetate kinase [ackA]. 1 399 186.365 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS03410 996d65f8ab261649fa91c30d178d3250 399 PIRSF PIRSF000722 1 399 6.0E-145 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS03410 996d65f8ab261649fa91c30d178d3250 399 TIGRFAM TIGR00016 ackA: acetate kinase 2 397 5.2E-170 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS03410 996d65f8ab261649fa91c30d178d3250 399 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 205 222 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS03410 996d65f8ab261649fa91c30d178d3250 399 Gene3D G3DSA:3.30.420.40 4 197 1.5E-65 T 29-03-2018 CVS42_RS02035 9a445f2bd95413c5bcfb94051d5b586e 315 Gene3D G3DSA:3.40.50.620 39 172 6.3E-21 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS02035 9a445f2bd95413c5bcfb94051d5b586e 315 Pfam PF02698 DUF218 domain 49 187 3.8E-21 T 29-03-2018 IPR003848 Domain of unknown function DUF218 CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 SUPERFAMILY SSF55073 518 672 6.28E-54 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 SUPERFAMILY SSF53850 39 260 5.65E-29 T 29-03-2018 CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 Pfam PF09084 NMT1/THI5 like 47 251 7.5E-44 T 29-03-2018 IPR015168 SsuA/THI5-like CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 377 508 2.2E-17 T 29-03-2018 IPR000014 PAS domain CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 Gene3D G3DSA:1.20.120.50 679 812 4.8E-26 T 29-03-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 SUPERFAMILY SSF55785 367 500 7.54E-17 T 29-03-2018 IPR000014 PAS domain CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 Gene3D G3DSA:3.30.70.270 512 678 5.3E-66 T 29-03-2018 CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 683 806 7.7E-24 T 29-03-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 SMART SM00091 380 447 5.3E-7 T 29-03-2018 IPR000014 PAS domain CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 Gene3D G3DSA:3.30.450.20 357 511 8.7E-23 T 29-03-2018 CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 Pfam PF00990 Diguanylate cyclase, GGDEF domain 513 665 9.4E-55 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 511 668 1.4E-45 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 ProSitePatterns PS00550 Hemerythrin family signature. 736 759 - T 29-03-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 Pfam PF00989 PAS fold 380 499 8.0E-6 T 29-03-2018 IPR013767 PAS fold GO:0006355 CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 SMART SM00267 502 670 3.0E-71 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 Gene3D G3DSA:3.40.190.10 33 142 1.2E-11 T 29-03-2018 CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 Gene3D G3DSA:3.40.190.10 149 327 9.6E-22 T 29-03-2018 CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 SUPERFAMILY SSF47188 680 805 3.66E-22 T 29-03-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CVS42_RS14225 65842471da5bddf6974471fe38c1ceb1 820 Pfam PF01814 Hemerythrin HHE cation binding domain 693 806 4.5E-7 T 29-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CVS42_RS12100 923cc9e5ae5aae6544d654d7b79829ab 224 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 76 174 2.4E-20 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12100 923cc9e5ae5aae6544d654d7b79829ab 224 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 181 41.648 T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12100 923cc9e5ae5aae6544d654d7b79829ab 224 SUPERFAMILY SSF56770 43 189 3.53E-62 T 29-03-2018 CVS42_RS12100 923cc9e5ae5aae6544d654d7b79829ab 224 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 148 164 - T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12100 923cc9e5ae5aae6544d654d7b79829ab 224 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 46 182 7.9E-67 T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12100 923cc9e5ae5aae6544d654d7b79829ab 224 Gene3D G3DSA:3.40.50.700 35 209 5.4E-37 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS17870 5614f4cd3797cf7b6bc8a16244e43f5c 149 SUPERFAMILY SSF55729 2 145 6.45E-30 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS17870 5614f4cd3797cf7b6bc8a16244e43f5c 149 Pfam PF00583 Acetyltransferase (GNAT) family 22 120 1.9E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS17870 5614f4cd3797cf7b6bc8a16244e43f5c 149 Gene3D G3DSA:3.40.630.30 1 147 3.1E-30 T 29-03-2018 CVS42_RS17870 5614f4cd3797cf7b6bc8a16244e43f5c 149 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 142 1.0E-30 T 29-03-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 CVS42_RS12210 c549ac214a74fb0470f9df44df5de840 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 90 110 5.3E-50 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CVS42_RS12210 c549ac214a74fb0470f9df44df5de840 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 48 71 5.3E-50 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CVS42_RS12210 c549ac214a74fb0470f9df44df5de840 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 451 471 5.3E-50 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CVS42_RS12210 c549ac214a74fb0470f9df44df5de840 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 393 416 5.3E-50 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CVS42_RS12210 c549ac214a74fb0470f9df44df5de840 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 369 393 5.3E-50 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CVS42_RS12210 c549ac214a74fb0470f9df44df5de840 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 336 357 5.3E-50 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CVS42_RS12210 c549ac214a74fb0470f9df44df5de840 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 436 451 5.3E-50 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CVS42_RS12210 c549ac214a74fb0470f9df44df5de840 472 Gene3D G3DSA:2.40.50.100 75 360 1.9E-18 T 29-03-2018 CVS42_RS12210 c549ac214a74fb0470f9df44df5de840 472 Pfam PF13437 HlyD family secretion protein 324 430 8.7E-17 T 29-03-2018 CVS42_RS12210 c549ac214a74fb0470f9df44df5de840 472 Pfam PF13533 Biotin-lipoyl like 87 115 2.9E-7 T 29-03-2018 CVS42_RS12210 c549ac214a74fb0470f9df44df5de840 472 ProSitePatterns PS00543 HlyD family secretion proteins signature. 436 458 - T 29-03-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 CVS42_RS12210 c549ac214a74fb0470f9df44df5de840 472 SUPERFAMILY SSF111369 71 142 7.19E-6 T 29-03-2018 CVS42_RS12210 c549ac214a74fb0470f9df44df5de840 472 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 39 472 1.1E-136 T 29-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 CVS42_RS04420 652eab0c557b48cebd33bd2b34e2661a 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 1.3E-80 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS04420 652eab0c557b48cebd33bd2b34e2661a 155 PIRSF PIRSF004505 1 154 8.4E-41 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS04420 652eab0c557b48cebd33bd2b34e2661a 155 SUPERFAMILY SSF75217 1 153 4.34E-50 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CVS42_RS04420 652eab0c557b48cebd33bd2b34e2661a 155 Pfam PF02590 Predicted SPOUT methyltransferase 1 153 6.4E-47 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS04420 652eab0c557b48cebd33bd2b34e2661a 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 27.521 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS04420 652eab0c557b48cebd33bd2b34e2661a 155 Gene3D G3DSA:3.40.1280.10 1 154 6.5E-49 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CVS42_RS11745 48990a5d127c66164308be2fa684264d 105 SUPERFAMILY SSF54736 20 104 2.2E-34 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CVS42_RS11745 48990a5d127c66164308be2fa684264d 105 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 101 2.8E-34 T 29-03-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 CVS42_RS11745 48990a5d127c66164308be2fa684264d 105 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 9 100 29.166 T 29-03-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CVS42_RS11745 48990a5d127c66164308be2fa684264d 105 Gene3D G3DSA:3.30.1390.10 12 104 2.2E-37 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CVS42_RS15850 1fe07aabcc2a90833cc618e45080f214 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 2.5E-25 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CVS42_RS15850 1fe07aabcc2a90833cc618e45080f214 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 2.5E-25 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CVS42_RS15850 1fe07aabcc2a90833cc618e45080f214 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 2.5E-25 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CVS42_RS15850 1fe07aabcc2a90833cc618e45080f214 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 2.5E-25 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CVS42_RS15850 1fe07aabcc2a90833cc618e45080f214 399 SUPERFAMILY SSF52374 7 317 2.17E-95 T 29-03-2018 CVS42_RS15850 1fe07aabcc2a90833cc618e45080f214 399 Gene3D G3DSA:3.40.50.620 1 218 1.5E-59 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS15850 1fe07aabcc2a90833cc618e45080f214 399 Pfam PF01479 S4 domain 341 382 1.2E-5 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS15850 1fe07aabcc2a90833cc618e45080f214 399 SMART SM00363 338 399 3.8E-4 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS15850 1fe07aabcc2a90833cc618e45080f214 399 Gene3D G3DSA:1.10.240.10 219 310 5.5E-26 T 29-03-2018 CVS42_RS15850 1fe07aabcc2a90833cc618e45080f214 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 398 47.38 T 29-03-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 CVS42_RS15850 1fe07aabcc2a90833cc618e45080f214 399 SUPERFAMILY SSF55174 298 398 3.93E-17 T 29-03-2018 CVS42_RS15850 1fe07aabcc2a90833cc618e45080f214 399 Pfam PF00579 tRNA synthetases class I (W and Y) 30 317 4.6E-73 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS15850 1fe07aabcc2a90833cc618e45080f214 399 Gene3D G3DSA:3.10.290.10 311 399 2.6E-19 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS15850 1fe07aabcc2a90833cc618e45080f214 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS15850 1fe07aabcc2a90833cc618e45080f214 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 7 399 4.6E-120 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CVS42_RS00740 270ee034f4cc095ffc8728196d182a77 609 Gene3D G3DSA:3.20.20.80 115 520 1.2E-102 T 29-03-2018 CVS42_RS00740 270ee034f4cc095ffc8728196d182a77 609 Gene3D G3DSA:2.60.40.10 2 112 1.9E-10 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS00740 270ee034f4cc095ffc8728196d182a77 609 Gene3D G3DSA:2.60.40.1180 521 609 8.2E-21 T 29-03-2018 CVS42_RS00740 270ee034f4cc095ffc8728196d182a77 609 Pfam PF16657 Maltogenic Amylase, C-terminal domain 527 604 6.2E-7 T 29-03-2018 IPR032091 Maltogenic Amylase, C-terminal CVS42_RS00740 270ee034f4cc095ffc8728196d182a77 609 SUPERFAMILY SSF81296 1 110 4.01E-14 T 29-03-2018 IPR014756 Immunoglobulin E-set CVS42_RS00740 270ee034f4cc095ffc8728196d182a77 609 SUPERFAMILY SSF51445 115 527 2.36E-104 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS00740 270ee034f4cc095ffc8728196d182a77 609 SMART SM00642 127 518 7.9E-95 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS00740 270ee034f4cc095ffc8728196d182a77 609 Pfam PF00128 Alpha amylase, catalytic domain 178 490 4.1E-76 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS00740 270ee034f4cc095ffc8728196d182a77 609 SUPERFAMILY SSF51011 532 606 1.14E-14 T 29-03-2018 CVS42_RS00740 270ee034f4cc095ffc8728196d182a77 609 PIRSF PIRSF036918 1 609 2.6E-242 T 29-03-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 Pfam PF00012 Hsp70 protein 4 602 7.8E-262 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 SUPERFAMILY SSF100934 507 611 2.16E-16 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 SUPERFAMILY SSF53067 187 382 3.24E-66 T 29-03-2018 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 Gene3D G3DSA:3.30.420.40 1 196 5.8E-80 T 29-03-2018 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 Gene3D G3DSA:3.30.420.40 197 366 7.7E-44 T 29-03-2018 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 SUPERFAMILY SSF53067 4 182 2.59E-65 T 29-03-2018 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 Gene3D G3DSA:2.60.34.10 390 531 2.1E-66 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 1.1E-290 T 29-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 SUPERFAMILY SSF100920 385 540 6.15E-62 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 Gene3D G3DSA:1.20.1270.10 532 618 1.4E-21 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.8E-79 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 PRINTS PR00301 70kDa heat shock protein signature 198 208 1.8E-79 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 PRINTS PR00301 70kDa heat shock protein signature 138 158 1.8E-79 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 PRINTS PR00301 70kDa heat shock protein signature 388 407 1.8E-79 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 PRINTS PR00301 70kDa heat shock protein signature 469 485 1.8E-79 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.8E-79 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 PRINTS PR00301 70kDa heat shock protein signature 334 350 1.8E-79 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 PRINTS PR00301 70kDa heat shock protein signature 365 385 1.8E-79 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.8E-79 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS14325 2096188e4707ab9fb02a5e00013b62f2 642 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 637 36.686 T 29-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 CVS42_RS06070 6f8f7c9b135645ef75a47d4b38fca63c 114 SUPERFAMILY SSF47413 10 76 1.61E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS06070 6f8f7c9b135645ef75a47d4b38fca63c 114 Gene3D G3DSA:3.30.1190.10 37 114 1.8E-11 T 29-03-2018 CVS42_RS06070 6f8f7c9b135645ef75a47d4b38fca63c 114 Gene3D G3DSA:1.10.10.10 5 36 3.6E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS06070 6f8f7c9b135645ef75a47d4b38fca63c 114 Pfam PF01381 Helix-turn-helix 19 71 5.0E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS06070 6f8f7c9b135645ef75a47d4b38fca63c 114 SMART SM00530 16 71 1.2E-10 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS13960 d4d293e489e215b0bbbecf2050f0ec2d 556 SUPERFAMILY SSF55874 422 552 1.22E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS13960 d4d293e489e215b0bbbecf2050f0ec2d 556 Gene3D G3DSA:3.30.450.40 206 368 3.5E-6 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS13960 d4d293e489e215b0bbbecf2050f0ec2d 556 SUPERFAMILY SSF55781 227 351 4.91E-8 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS13960 d4d293e489e215b0bbbecf2050f0ec2d 556 Pfam PF07694 5TMR of 5TMR-LYT 26 193 6.1E-59 T 29-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CVS42_RS13960 d4d293e489e215b0bbbecf2050f0ec2d 556 Gene3D G3DSA:3.30.565.10 416 555 9.3E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS13960 d4d293e489e215b0bbbecf2050f0ec2d 556 SMART SM00065 224 361 0.0033 T 29-03-2018 IPR003018 GAF domain GO:0005515 CVS42_RS13960 d4d293e489e215b0bbbecf2050f0ec2d 556 Pfam PF06580 Histidine kinase 367 444 1.3E-25 T 29-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CVS42_RS16100 3b81488af85b5c7e7933bfc23a851e0a 413 Gene3D G3DSA:2.40.170.10 24 413 4.3E-132 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CVS42_RS16100 3b81488af85b5c7e7933bfc23a851e0a 413 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 31 408 3.0E-132 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CVS42_RS16100 3b81488af85b5c7e7933bfc23a851e0a 413 SUPERFAMILY SSF56935 24 413 1.97E-118 T 29-03-2018 CVS42_RS16100 3b81488af85b5c7e7933bfc23a851e0a 413 Hamap MF_01301 Maltoporin [lamB]. 2 413 44.312 T 29-03-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 CVS42_RS16100 3b81488af85b5c7e7933bfc23a851e0a 413 Pfam PF02264 LamB porin 26 413 5.5E-118 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CVS42_RS04400 4f6c3b8bd8910960b1eb1ae7d2753e7e 326 Gene3D G3DSA:2.40.40.10 63 174 4.5E-18 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CVS42_RS04400 4f6c3b8bd8910960b1eb1ae7d2753e7e 326 Gene3D G3DSA:3.30.70.1070 259 326 1.5E-5 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CVS42_RS04400 4f6c3b8bd8910960b1eb1ae7d2753e7e 326 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 13 174 21.553 T 29-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 CVS42_RS04400 4f6c3b8bd8910960b1eb1ae7d2753e7e 326 Pfam PF05036 Sporulation related domain 259 323 8.6E-6 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CVS42_RS04400 4f6c3b8bd8910960b1eb1ae7d2753e7e 326 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 84 176 3.7E-37 T 29-03-2018 IPR012997 Rare lipoprotein A CVS42_RS04400 4f6c3b8bd8910960b1eb1ae7d2753e7e 326 SUPERFAMILY SSF50685 87 170 2.41E-7 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CVS42_RS04400 4f6c3b8bd8910960b1eb1ae7d2753e7e 326 SUPERFAMILY SSF110997 254 325 6.8E-8 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CVS42_RS04400 4f6c3b8bd8910960b1eb1ae7d2753e7e 326 Pfam PF03330 Lytic transglycolase 83 170 2.6E-18 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CVS42_RS04990 a989451438834ec8a823bb5d8bff97ed 419 SUPERFAMILY SSF69075 315 415 1.31E-28 T 29-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CVS42_RS04990 a989451438834ec8a823bb5d8bff97ed 419 SUPERFAMILY SSF69742 1 156 1.83E-47 T 29-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CVS42_RS04990 a989451438834ec8a823bb5d8bff97ed 419 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 29-03-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CVS42_RS04990 a989451438834ec8a823bb5d8bff97ed 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 8.3E-49 T 29-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CVS42_RS04990 a989451438834ec8a823bb5d8bff97ed 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 409 9.7E-25 T 29-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CVS42_RS04990 a989451438834ec8a823bb5d8bff97ed 419 Gene3D G3DSA:3.40.50.720 178 342 1.7E-24 T 29-03-2018 CVS42_RS04990 a989451438834ec8a823bb5d8bff97ed 419 Gene3D G3DSA:1.10.1200.70 343 416 6.9E-23 T 29-03-2018 CVS42_RS04990 a989451438834ec8a823bb5d8bff97ed 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.0E-49 T 29-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CVS42_RS04990 a989451438834ec8a823bb5d8bff97ed 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 414 1.4E-143 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CVS42_RS04990 a989451438834ec8a823bb5d8bff97ed 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 31.365 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CVS42_RS04990 a989451438834ec8a823bb5d8bff97ed 419 PIRSF PIRSF000445 1 419 3.8E-154 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CVS42_RS04990 a989451438834ec8a823bb5d8bff97ed 419 SUPERFAMILY SSF51735 160 313 1.03E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS00060 c03ecb7f4a3c253f88247870a8c459e6 367 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 29-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CVS42_RS00060 c03ecb7f4a3c253f88247870a8c459e6 367 SUPERFAMILY SSF52540 3 359 2.21E-38 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00060 c03ecb7f4a3c253f88247870a8c459e6 367 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 352 8.2E-32 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CVS42_RS00060 c03ecb7f4a3c253f88247870a8c459e6 367 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 367 95.783 T 29-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CVS42_RS00060 c03ecb7f4a3c253f88247870a8c459e6 367 Gene3D G3DSA:3.40.50.300 2 366 1.5E-30 T 29-03-2018 CVS42_RS00060 c03ecb7f4a3c253f88247870a8c459e6 367 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 3 356 1.7E-115 T 29-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CVS42_RS00060 c03ecb7f4a3c253f88247870a8c459e6 367 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 29-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CVS42_RS05185 8dd27284c483e0e388a25934b35ec16a 306 SUPERFAMILY SSF161098 70 255 6.54E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS05185 8dd27284c483e0e388a25934b35ec16a 306 Gene3D G3DSA:1.10.3720.10 10 268 5.3E-34 T 29-03-2018 CVS42_RS05185 8dd27284c483e0e388a25934b35ec16a 306 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 7 52 1.2E-5 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CVS42_RS05185 8dd27284c483e0e388a25934b35ec16a 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 271 2.4E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 SMART SM00073 4 102 3.5E-30 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 SUPERFAMILY SSF47384 336 396 2.9E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 SUPERFAMILY SSF47226 4 110 3.01E-29 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 Gene3D G3DSA:1.20.120.160 1 152 1.6E-31 T 29-03-2018 CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 559 3.2E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 499 3.2E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 535 3.2E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 578 3.2E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 SMART SM01231 335 395 6.3E-14 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 SMART SM00387 440 581 2.0E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 Gene3D G3DSA:2.40.50.180 593 663 1.7E-14 T 29-03-2018 CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 SMART SM00260 573 710 4.8E-29 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 SUPERFAMILY SSF55874 397 579 7.6E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 Gene3D G3DSA:1.10.287.560 335 396 6.4E-13 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 Gene3D G3DSA:2.30.30.40 664 710 2.7E-18 T 29-03-2018 CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 Gene3D G3DSA:3.30.565.10 397 582 9.1E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 Pfam PF01584 CheW-like domain 586 712 6.9E-25 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 443 580 1.2E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 337 391 4.7E-8 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 SUPERFAMILY SSF50341 580 710 2.62E-32 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS16560 332d13ccc8b5e0629c010af1b773ec5c 736 Pfam PF01627 Hpt domain 8 99 1.1E-18 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 SUPERFAMILY SSF50249 221 645 7.42E-144 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 SMART SM00955 261 589 1.7E-184 T 29-03-2018 CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 ProSitePatterns PS01175 Ribonuclease II family signature. 556 580 - T 29-03-2018 IPR022966 Ribonuclease II/R, conserved site CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 SMART SM00357 87 146 2.0E-13 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 SUPERFAMILY SSF50249 68 147 2.65E-18 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 Gene3D G3DSA:2.40.50.140 78 152 1.0E-5 T 29-03-2018 CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 SUPERFAMILY SSF50249 646 740 3.76E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 Gene3D G3DSA:2.40.50.140 647 772 1.6E-22 T 29-03-2018 CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 Hamap MF_01895 Ribonuclease R [rnr]. 39 728 57.501 T 29-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 Gene3D G3DSA:1.10.10.10 18 77 3.0E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 68 728 3.5E-253 T 29-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 Pfam PF08461 Ribonuclease R winged-helix domain 24 82 1.5E-13 T 29-03-2018 IPR013668 Ribonuclease R winged-helix domain CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 Pfam PF08206 Ribonuclease B OB domain 88 144 3.7E-21 T 29-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 SUPERFAMILY SSF50249 139 237 8.57E-14 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 Gene3D G3DSA:3.40.50.2300 470 562 0.042 T 29-03-2018 CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 SMART SM00316 645 728 2.0E-14 T 29-03-2018 IPR022967 RNA-binding domain, S1 CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 TIGRFAM TIGR02063 RNase_R: ribonuclease R 20 729 1.8E-272 T 29-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 Pfam PF00773 RNB domain 261 585 5.4E-104 T 29-03-2018 CVS42_RS02420 924980e4854b87cb355234cac6c1a422 795 Pfam PF00575 S1 RNA binding domain 645 725 2.7E-13 T 29-03-2018 IPR003029 S1 domain GO:0003676 CVS42_RS01985 20aba3f8f9263490b2d75e5b2c767f41 187 Pfam PF02142 MGS-like domain 69 153 1.4E-16 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CVS42_RS01985 20aba3f8f9263490b2d75e5b2c767f41 187 PIRSF PIRSF006614 43 186 3.1E-61 T 29-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CVS42_RS01985 20aba3f8f9263490b2d75e5b2c767f41 187 ProSitePatterns PS01335 Methylglyoxal synthase active site. 100 108 - T 29-03-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CVS42_RS01985 20aba3f8f9263490b2d75e5b2c767f41 187 SUPERFAMILY SSF52335 41 182 2.9E-54 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CVS42_RS01985 20aba3f8f9263490b2d75e5b2c767f41 187 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 47 166 36.901 T 29-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CVS42_RS01985 20aba3f8f9263490b2d75e5b2c767f41 187 SMART SM00851 60 153 9.5E-19 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CVS42_RS01985 20aba3f8f9263490b2d75e5b2c767f41 187 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 46 186 1.5E-60 T 29-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CVS42_RS01985 20aba3f8f9263490b2d75e5b2c767f41 187 Gene3D G3DSA:3.40.50.1380 36 187 3.4E-39 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CVS42_RS16365 efbc972cca474025bb21b004e7edd3fe 218 Gene3D G3DSA:2.40.160.10 13 216 8.3E-9 T 29-03-2018 CVS42_RS16365 efbc972cca474025bb21b004e7edd3fe 218 SUPERFAMILY SSF56935 57 218 2.75E-6 T 29-03-2018 CVS42_RS21515 cb3d2d8b64b34341cbdf80982a22934d 207 Pfam PF00717 Peptidase S24-like 119 184 3.1E-16 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CVS42_RS21515 cb3d2d8b64b34341cbdf80982a22934d 207 Hamap MF_00015 LexA repressor [lexA]. 3 204 32.619 T 29-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CVS42_RS21515 cb3d2d8b64b34341cbdf80982a22934d 207 Gene3D G3DSA:2.10.109.10 85 204 2.1E-27 T 29-03-2018 CVS42_RS21515 cb3d2d8b64b34341cbdf80982a22934d 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 127 138 1.2E-12 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CVS42_RS21515 cb3d2d8b64b34341cbdf80982a22934d 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 116 126 1.2E-12 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CVS42_RS21515 cb3d2d8b64b34341cbdf80982a22934d 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 155 167 1.2E-12 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CVS42_RS21515 cb3d2d8b64b34341cbdf80982a22934d 207 Gene3D G3DSA:1.10.10.10 1 70 1.8E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS21515 cb3d2d8b64b34341cbdf80982a22934d 207 TIGRFAM TIGR00498 lexA: repressor LexA 1 204 1.3E-79 T 29-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CVS42_RS21515 cb3d2d8b64b34341cbdf80982a22934d 207 SUPERFAMILY SSF51306 81 203 9.24E-38 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CVS42_RS21515 cb3d2d8b64b34341cbdf80982a22934d 207 Pfam PF01726 LexA DNA binding domain 1 65 1.1E-30 T 29-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CVS42_RS21515 cb3d2d8b64b34341cbdf80982a22934d 207 SUPERFAMILY SSF46785 3 69 1.56E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS14655 45a451141e541d53d5d024298483340b 234 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 3 227 5.0E-54 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CVS42_RS14655 45a451141e541d53d5d024298483340b 234 SUPERFAMILY SSF75217 2 155 1.5E-27 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CVS42_RS14655 45a451141e541d53d5d024298483340b 234 Gene3D G3DSA:3.40.1280.10 2 162 9.5E-33 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CVS42_RS14655 45a451141e541d53d5d024298483340b 234 Pfam PF00588 SpoU rRNA Methylase family 3 152 2.2E-29 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CVS42_RS14655 45a451141e541d53d5d024298483340b 234 PIRSF PIRSF004808 1 234 9.3E-54 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CVS42_RS08875 a549612b49b3496033531957feb41be2 286 SUPERFAMILY SSF56112 18 225 4.08E-21 T 29-03-2018 IPR011009 Protein kinase-like domain CVS42_RS08875 a549612b49b3496033531957feb41be2 286 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 29-03-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|Reactome: R-HSA-6791226 CVS42_RS08875 a549612b49b3496033531957feb41be2 286 SMART SM00090 7 228 3.4E-11 T 29-03-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|Reactome: R-HSA-6791226 CVS42_RS08875 a549612b49b3496033531957feb41be2 286 Gene3D G3DSA:3.30.200.20 16 125 9.7E-23 T 29-03-2018 CVS42_RS08875 a549612b49b3496033531957feb41be2 286 Pfam PF01163 RIO1 family 30 221 2.5E-42 T 29-03-2018 CVS42_RS08875 a549612b49b3496033531957feb41be2 286 Gene3D G3DSA:1.10.510.10 134 235 1.4E-4 T 29-03-2018 CVS42_RS04145 293e3cde65e8d07c95460bc0d3c542f3 405 Gene3D G3DSA:1.10.390.10 247 401 3.3E-4 T 29-03-2018 CVS42_RS02075 ba5495878c9376577a43cb1f59d48f75 307 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 19 303 3.5E-91 T 29-03-2018 CVS42_RS02075 ba5495878c9376577a43cb1f59d48f75 307 Pfam PF01040 UbiA prenyltransferase family 29 262 1.8E-39 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CVS42_RS02075 ba5495878c9376577a43cb1f59d48f75 307 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 10 304 20.729 T 29-03-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CVS42_RS02075 ba5495878c9376577a43cb1f59d48f75 307 PIRSF PIRSF005355 4 307 3.4E-84 T 29-03-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 SMART SM00052 584 831 2.5E-92 T 29-03-2018 IPR001633 EAL domain CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 173 293 3.4E-21 T 29-03-2018 IPR000014 PAS domain CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 297 413 1.1E-19 T 29-03-2018 IPR000014 PAS domain CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 Gene3D G3DSA:3.30.450.20 158 297 1.7E-26 T 29-03-2018 CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 415 569 5.6E-30 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 Gene3D G3DSA:3.20.20.450 583 845 1.6E-90 T 29-03-2018 IPR001633 EAL domain CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 Pfam PF08447 PAS fold 194 276 4.9E-14 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 Pfam PF00563 EAL domain 590 826 1.4E-69 T 29-03-2018 IPR001633 EAL domain CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 SUPERFAMILY SSF55785 179 288 5.45E-23 T 29-03-2018 IPR000014 PAS domain CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 SUPERFAMILY SSF55781 24 158 4.17E-9 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 SUPERFAMILY SSF55073 423 569 3.92E-40 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 SUPERFAMILY SSF141868 590 836 6.28E-82 T 29-03-2018 IPR001633 EAL domain CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 SUPERFAMILY SSF55785 302 403 1.16E-24 T 29-03-2018 IPR000014 PAS domain CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 SMART SM00091 171 237 2.1E-11 T 29-03-2018 IPR000014 PAS domain CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 SMART SM00091 294 364 5.4E-7 T 29-03-2018 IPR000014 PAS domain CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 Pfam PF00990 Diguanylate cyclase, GGDEF domain 418 569 2.1E-36 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 Gene3D G3DSA:3.30.450.20 298 430 8.8E-27 T 29-03-2018 CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 SMART SM00086 366 407 7.3 T 29-03-2018 IPR001610 PAC motif CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 SMART SM00086 244 286 2.9E-6 T 29-03-2018 IPR001610 PAC motif CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 Pfam PF13426 PAS domain 305 406 5.8E-16 T 29-03-2018 IPR000014 PAS domain CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 SMART SM00267 407 575 1.9E-41 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 Gene3D G3DSA:3.30.450.40 1 157 2.7E-9 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS21935 99d8afa8017462d7122e302d66b67526 848 Gene3D G3DSA:3.30.70.270 431 582 3.8E-48 T 29-03-2018 CVS42_RS14360 6382b2335e908d62f651455eee1a26f4 454 SUPERFAMILY SSF56954 2 447 2.22E-90 T 29-03-2018 CVS42_RS14360 6382b2335e908d62f651455eee1a26f4 454 Pfam PF02321 Outer membrane efflux protein 268 446 5.9E-20 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CVS42_RS14360 6382b2335e908d62f651455eee1a26f4 454 Pfam PF02321 Outer membrane efflux protein 57 240 1.4E-18 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CVS42_RS14360 6382b2335e908d62f651455eee1a26f4 454 Gene3D G3DSA:1.20.1600.10 16 448 2.3E-78 T 29-03-2018 CVS42_RS14360 6382b2335e908d62f651455eee1a26f4 454 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 8 447 2.6E-84 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CVS42_RS21145 968c73c4ac681286a3e6cacfe01570be 279 Gene3D G3DSA:3.40.1190.20 1 277 2.2E-44 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS21145 968c73c4ac681286a3e6cacfe01570be 279 SUPERFAMILY SSF53613 1 270 3.27E-50 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS21145 968c73c4ac681286a3e6cacfe01570be 279 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 223 236 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CVS42_RS21145 968c73c4ac681286a3e6cacfe01570be 279 Pfam PF00294 pfkB family carbohydrate kinase 182 268 1.9E-22 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CVS42_RS21145 968c73c4ac681286a3e6cacfe01570be 279 Pfam PF00294 pfkB family carbohydrate kinase 34 107 3.1E-9 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CVS42_RS10145 d9cca071b7023b4c13daed9389c64d73 1034 Pfam PF00575 S1 RNA binding domain 36 118 8.9E-16 T 29-03-2018 IPR003029 S1 domain GO:0003676 CVS42_RS10145 d9cca071b7023b4c13daed9389c64d73 1034 Pfam PF10150 Ribonuclease E/G family 121 390 5.2E-95 T 29-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CVS42_RS10145 d9cca071b7023b4c13daed9389c64d73 1034 SMART SM00316 37 119 1.6E-11 T 29-03-2018 IPR022967 RNA-binding domain, S1 CVS42_RS10145 d9cca071b7023b4c13daed9389c64d73 1034 SUPERFAMILY SSF50249 40 124 9.86E-20 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS10145 d9cca071b7023b4c13daed9389c64d73 1034 Gene3D G3DSA:2.40.50.140 33 124 4.9E-31 T 29-03-2018 CVS42_RS10145 d9cca071b7023b4c13daed9389c64d73 1034 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 2.3E-170 T 29-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CVS42_RS10145 d9cca071b7023b4c13daed9389c64d73 1034 Hamap MF_00970 Ribonuclease E [rne]. 1 995 35.597 T 29-03-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 CVS42_RS02785 52e02043ed82652bae5188cf9b2d6d2f 258 Pfam PF00196 Bacterial regulatory proteins, luxR family 180 233 5.7E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS02785 52e02043ed82652bae5188cf9b2d6d2f 258 Gene3D G3DSA:3.30.450.80 1 170 3.6E-39 T 29-03-2018 CVS42_RS02785 52e02043ed82652bae5188cf9b2d6d2f 258 SMART SM00421 178 235 4.4E-20 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS02785 52e02043ed82652bae5188cf9b2d6d2f 258 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 211 3.1E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS02785 52e02043ed82652bae5188cf9b2d6d2f 258 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 211 223 3.1E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS02785 52e02043ed82652bae5188cf9b2d6d2f 258 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 195 3.1E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS02785 52e02043ed82652bae5188cf9b2d6d2f 258 SUPERFAMILY SSF46894 171 240 2.14E-16 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS02785 52e02043ed82652bae5188cf9b2d6d2f 258 Gene3D G3DSA:1.10.10.10 171 248 2.5E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02785 52e02043ed82652bae5188cf9b2d6d2f 258 SUPERFAMILY SSF75516 5 171 9.02E-37 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CVS42_RS02785 52e02043ed82652bae5188cf9b2d6d2f 258 Pfam PF03472 Autoinducer binding domain 22 165 5.2E-32 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CVS42_RS19655 bc8d209a5919d3540e5e28b094572242 553 Gene3D G3DSA:3.90.400.10 121 170 4.5E-29 T 29-03-2018 CVS42_RS19655 bc8d209a5919d3540e5e28b094572242 553 SUPERFAMILY SSF51011 475 552 3.24E-19 T 29-03-2018 CVS42_RS19655 bc8d209a5919d3540e5e28b094572242 553 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 6 550 7.3E-259 T 29-03-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 CVS42_RS19655 bc8d209a5919d3540e5e28b094572242 553 Pfam PF00128 Alpha amylase, catalytic domain 29 372 3.0E-124 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS19655 bc8d209a5919d3540e5e28b094572242 553 SMART SM00642 14 414 2.9E-151 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS19655 bc8d209a5919d3540e5e28b094572242 553 SUPERFAMILY SSF51445 4 472 1.61E-155 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS19655 bc8d209a5919d3540e5e28b094572242 553 Pfam PF16657 Maltogenic Amylase, C-terminal domain 475 546 1.2E-8 T 29-03-2018 IPR032091 Maltogenic Amylase, C-terminal CVS42_RS19655 bc8d209a5919d3540e5e28b094572242 553 Gene3D G3DSA:2.60.40.1180 476 553 1.7E-21 T 29-03-2018 CVS42_RS19655 bc8d209a5919d3540e5e28b094572242 553 Gene3D G3DSA:3.20.20.80 1 120 2.3E-48 T 29-03-2018 CVS42_RS19655 bc8d209a5919d3540e5e28b094572242 553 Gene3D G3DSA:3.20.20.470 171 337 3.2E-36 T 29-03-2018 CVS42_RS19655 bc8d209a5919d3540e5e28b094572242 553 Gene3D G3DSA:3.20.20.80 338 475 6.5E-23 T 29-03-2018 CVS42_RS11195 d02e8a69c5155956bda2b1364a6b2038 509 SUPERFAMILY SSF49464 4 62 2.59E-8 T 29-03-2018 IPR008969 Carboxypeptidase-like, regulatory domain CVS42_RS11195 d02e8a69c5155956bda2b1364a6b2038 509 Pfam PF08400 Prophage tail fibre N-terminal 2 134 4.7E-11 T 29-03-2018 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal CVS42_RS11195 d02e8a69c5155956bda2b1364a6b2038 509 Gene3D G3DSA:2.60.40.1120 4 82 1.3E-9 T 29-03-2018 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 SUPERFAMILY SSF52172 956 1073 2.7E-34 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 Gene3D G3DSA:1.20.120.160 1072 1193 8.0E-4 T 29-03-2018 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 74 279 4.5E-17 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 305 521 6.7E-21 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 SUPERFAMILY SSF47384 695 773 1.9E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 SUPERFAMILY SSF53850 305 521 2.33E-27 T 29-03-2018 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 SMART SM00062 304 525 2.5E-7 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 SMART SM00062 68 281 8.7E-7 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 SUPERFAMILY SSF47226 1053 1163 4.54E-10 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 Pfam PF00989 PAS fold 580 690 5.7E-9 T 29-03-2018 IPR013767 PAS fold GO:0006355 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 SMART SM00388 706 772 8.3E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 Gene3D G3DSA:3.30.565.10 767 932 3.4E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 Gene3D G3DSA:3.30.450.20 563 701 5.3E-16 T 29-03-2018 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 SUPERFAMILY SSF55874 762 930 1.31E-41 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 PRINTS PR00344 Bacterial sensor protein C-terminal signature 916 929 6.6E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 PRINTS PR00344 Bacterial sensor protein C-terminal signature 875 885 6.6E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 PRINTS PR00344 Bacterial sensor protein C-terminal signature 857 871 6.6E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 PRINTS PR00344 Bacterial sensor protein C-terminal signature 892 910 6.6E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 Pfam PF00512 His Kinase A (phospho-acceptor) domain 706 772 1.2E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 Gene3D G3DSA:3.40.50.2300 945 1071 7.3E-35 T 29-03-2018 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 Gene3D G3DSA:3.40.190.10 171 280 5.5E-6 T 29-03-2018 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 SUPERFAMILY SSF53850 62 280 8.47E-25 T 29-03-2018 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 818 930 1.3E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 SMART SM00387 817 932 5.3E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 Pfam PF00072 Response regulator receiver domain 957 1069 4.4E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 Gene3D G3DSA:3.40.190.10 422 522 0.004 T 29-03-2018 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 Gene3D G3DSA:3.40.190.10 288 421 1.2E-16 T 29-03-2018 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 Gene3D G3DSA:3.40.190.10 53 170 1.0E-11 T 29-03-2018 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 SMART SM00448 955 1070 5.4E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 Gene3D G3DSA:1.10.287.130 702 766 3.1E-16 T 29-03-2018 CVS42_RS06185 674f4f087d70fb0725260da64494516f 1195 SUPERFAMILY SSF55785 565 685 1.33E-13 T 29-03-2018 IPR000014 PAS domain CVS42_RS02620 478755c3ff9f166d6ff0f66a32c74b2d 444 Pfam PF05525 Branched-chain amino acid transport protein 12 433 2.2E-129 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CVS42_RS02620 478755c3ff9f166d6ff0f66a32c74b2d 444 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 18 422 1.7E-119 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CVS42_RS22200 acf5dfead570166c24891b598c67e0ae 660 Gene3D G3DSA:1.10.3470.10 3 332 2.9E-46 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CVS42_RS22200 acf5dfead570166c24891b598c67e0ae 660 SUPERFAMILY SSF81345 11 327 3.27E-58 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CVS42_RS22200 acf5dfead570166c24891b598c67e0ae 660 Gene3D G3DSA:1.10.3470.10 340 660 1.7E-42 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CVS42_RS22200 acf5dfead570166c24891b598c67e0ae 660 SUPERFAMILY SSF81345 348 659 8.89E-62 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CVS42_RS22200 acf5dfead570166c24891b598c67e0ae 660 Pfam PF01032 FecCD transport family 21 325 8.1E-67 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CVS42_RS22200 acf5dfead570166c24891b598c67e0ae 660 Pfam PF01032 FecCD transport family 361 659 1.5E-67 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CVS42_RS16625 8fd7290a5efa35aa18e90d44e1d3f2e4 152 Gene3D G3DSA:2.30.30.180 88 148 6.2E-16 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CVS42_RS16625 8fd7290a5efa35aa18e90d44e1d3f2e4 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.655 T 29-03-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 CVS42_RS16625 8fd7290a5efa35aa18e90d44e1d3f2e4 152 SUPERFAMILY SSF75420 3 83 1.57E-25 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CVS42_RS16625 8fd7290a5efa35aa18e90d44e1d3f2e4 152 Pfam PF02576 RimP N-terminal domain 12 83 1.1E-27 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CVS42_RS16625 8fd7290a5efa35aa18e90d44e1d3f2e4 152 SUPERFAMILY SSF74942 84 151 1.14E-17 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CVS42_RS16625 8fd7290a5efa35aa18e90d44e1d3f2e4 152 Pfam PF17384 RimP C-terminal SH3 domain 86 151 1.0E-18 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CVS42_RS16625 8fd7290a5efa35aa18e90d44e1d3f2e4 152 Gene3D G3DSA:3.30.300.70 1 80 8.9E-29 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CVS42_RS08845 3e07345c16e2dc3bbec0dcfb714de65b 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 5.8E-36 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CVS42_RS08845 3e07345c16e2dc3bbec0dcfb714de65b 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 4.7E-38 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CVS42_RS08845 3e07345c16e2dc3bbec0dcfb714de65b 109 Gene3D G3DSA:3.30.1310.10 1 109 1.6E-45 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CVS42_RS08845 3e07345c16e2dc3bbec0dcfb714de65b 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.375 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CVS42_RS08845 3e07345c16e2dc3bbec0dcfb714de65b 109 PIRSF PIRSF004555 3 109 3.2E-40 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CVS42_RS08845 3e07345c16e2dc3bbec0dcfb714de65b 109 SUPERFAMILY SSF82607 11 103 3.01E-36 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CVS42_RS14065 10510697044004577720f3a2d41c8444 398 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 8 387 47.746 T 29-03-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CVS42_RS14065 10510697044004577720f3a2d41c8444 398 Pfam PF00155 Aminotransferase class I and II 45 383 4.4E-55 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CVS42_RS14065 10510697044004577720f3a2d41c8444 398 Gene3D G3DSA:3.90.1150.10 285 386 4.1E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS14065 10510697044004577720f3a2d41c8444 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 238 247 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CVS42_RS14065 10510697044004577720f3a2d41c8444 398 SUPERFAMILY SSF53383 25 383 4.74E-101 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS14065 10510697044004577720f3a2d41c8444 398 Gene3D G3DSA:3.40.640.10 137 284 9.6E-41 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS14065 10510697044004577720f3a2d41c8444 398 Gene3D G3DSA:3.90.1150.10 23 136 3.6E-6 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS14065 10510697044004577720f3a2d41c8444 398 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 25 383 2.4E-133 T 29-03-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CVS42_RS03975 50fa1b0cc131457af57ac60654950454 299 Pfam PF00072 Response regulator receiver domain 172 286 5.4E-16 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS03975 50fa1b0cc131457af57ac60654950454 299 PIRSF PIRSF002867 1 295 1.0E-84 T 29-03-2018 IPR024181 Chemotaxis response regulator CheV CVS42_RS03975 50fa1b0cc131457af57ac60654950454 299 Gene3D G3DSA:2.30.30.40 97 138 7.4E-11 T 29-03-2018 CVS42_RS03975 50fa1b0cc131457af57ac60654950454 299 SMART SM00448 170 287 3.8E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS03975 50fa1b0cc131457af57ac60654950454 299 SMART SM00260 6 144 3.5E-19 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS03975 50fa1b0cc131457af57ac60654950454 299 SUPERFAMILY SSF52172 167 291 3.56E-24 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS03975 50fa1b0cc131457af57ac60654950454 299 Gene3D G3DSA:3.40.50.2300 164 299 2.1E-22 T 29-03-2018 CVS42_RS03975 50fa1b0cc131457af57ac60654950454 299 Pfam PF01584 CheW-like domain 11 146 1.7E-32 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS03975 50fa1b0cc131457af57ac60654950454 299 Gene3D G3DSA:2.40.50.180 28 96 7.2E-15 T 29-03-2018 CVS42_RS03975 50fa1b0cc131457af57ac60654950454 299 SUPERFAMILY SSF50341 8 148 8.5E-34 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS19260 38d1dc8cda7ffaeaf6be90868612fa67 85 PIRSF PIRSF003113 1 84 5.2E-21 T 29-03-2018 IPR002634 BolA protein CVS42_RS19260 38d1dc8cda7ffaeaf6be90868612fa67 85 Gene3D G3DSA:3.30.300.90 1 82 5.2E-24 T 29-03-2018 CVS42_RS19260 38d1dc8cda7ffaeaf6be90868612fa67 85 SUPERFAMILY SSF82657 1 81 1.44E-27 T 29-03-2018 IPR002634 BolA protein CVS42_RS19260 38d1dc8cda7ffaeaf6be90868612fa67 85 Pfam PF01722 BolA-like protein 19 74 3.7E-13 T 29-03-2018 IPR002634 BolA protein CVS42_RS13260 dc040a494a3a56c61896b826e27c37c7 269 Gene3D G3DSA:3.30.479.10 1 127 1.4E-24 T 29-03-2018 CVS42_RS13260 dc040a494a3a56c61896b826e27c37c7 269 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 2 112 1.1E-8 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CVS42_RS13260 dc040a494a3a56c61896b826e27c37c7 269 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 128 163 9.4E-5 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CVS42_RS13260 dc040a494a3a56c61896b826e27c37c7 269 Gene3D G3DSA:3.30.479.10 128 269 1.2E-23 T 29-03-2018 CVS42_RS13260 dc040a494a3a56c61896b826e27c37c7 269 SUPERFAMILY SSF55620 129 268 1.17E-26 T 29-03-2018 CVS42_RS13260 dc040a494a3a56c61896b826e27c37c7 269 SUPERFAMILY SSF55620 1 132 4.11E-27 T 29-03-2018 CVS42_RS14330 0edc9cbbdde342403d76fb5cdbd22b63 191 PRINTS PR00773 GrpE protein signature 85 100 8.4E-29 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CVS42_RS14330 0edc9cbbdde342403d76fb5cdbd22b63 191 PRINTS PR00773 GrpE protein signature 140 155 8.4E-29 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CVS42_RS14330 0edc9cbbdde342403d76fb5cdbd22b63 191 PRINTS PR00773 GrpE protein signature 57 73 8.4E-29 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CVS42_RS14330 0edc9cbbdde342403d76fb5cdbd22b63 191 PRINTS PR00773 GrpE protein signature 167 186 8.4E-29 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CVS42_RS14330 0edc9cbbdde342403d76fb5cdbd22b63 191 Gene3D G3DSA:3.90.20.20 25 131 1.8E-29 T 29-03-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CVS42_RS14330 0edc9cbbdde342403d76fb5cdbd22b63 191 SUPERFAMILY SSF51064 135 188 2.35E-19 T 29-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CVS42_RS14330 0edc9cbbdde342403d76fb5cdbd22b63 191 Gene3D G3DSA:2.30.22.10 132 188 2.7E-22 T 29-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CVS42_RS14330 0edc9cbbdde342403d76fb5cdbd22b63 191 Pfam PF01025 GrpE 26 188 7.1E-54 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CVS42_RS14330 0edc9cbbdde342403d76fb5cdbd22b63 191 Hamap MF_01151 Protein GrpE [grpE]. 2 188 21.236 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CVS42_RS14330 0edc9cbbdde342403d76fb5cdbd22b63 191 ProSitePatterns PS01071 grpE protein signature. 143 186 - T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CVS42_RS14330 0edc9cbbdde342403d76fb5cdbd22b63 191 SUPERFAMILY SSF58014 34 132 7.45E-29 T 29-03-2018 CVS42_RS17595 2440e85b6bc9beacb98be50a137eb31a 456 SUPERFAMILY SSF52540 245 434 7.82E-33 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS17595 2440e85b6bc9beacb98be50a137eb31a 456 Pfam PF02562 PhoH-like protein 246 450 7.9E-52 T 29-03-2018 IPR003714 PhoH-like protein GO:0005524 CVS42_RS17595 2440e85b6bc9beacb98be50a137eb31a 456 Gene3D G3DSA:3.40.50.300 243 452 2.3E-23 T 29-03-2018 CVS42_RS17595 2440e85b6bc9beacb98be50a137eb31a 456 SUPERFAMILY SSF88723 7 68 7.65E-15 T 29-03-2018 IPR029060 PIN domain-like CVS42_RS17595 2440e85b6bc9beacb98be50a137eb31a 456 SUPERFAMILY SSF88723 102 159 7.65E-15 T 29-03-2018 IPR029060 PIN domain-like CVS42_RS17595 2440e85b6bc9beacb98be50a137eb31a 456 SMART SM00670 7 139 1.0E-8 T 29-03-2018 IPR002716 PIN domain CVS42_RS17595 2440e85b6bc9beacb98be50a137eb31a 456 Pfam PF13638 PIN domain 9 148 7.7E-37 T 29-03-2018 IPR002716 PIN domain CVS42_RS17595 2440e85b6bc9beacb98be50a137eb31a 456 Gene3D G3DSA:3.40.50.1010 6 232 2.9E-32 T 29-03-2018 IPR029060 PIN domain-like CVS42_RS02985 dd921ceee4ecdc0aa660201046bc0de9 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 29-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS02985 dd921ceee4ecdc0aa660201046bc0de9 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 2.6E-40 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS02985 dd921ceee4ecdc0aa660201046bc0de9 331 SMART SM00846 3 150 7.9E-96 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS02985 dd921ceee4ecdc0aa660201046bc0de9 331 SUPERFAMILY SSF51735 3 166 2.63E-68 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS02985 dd921ceee4ecdc0aa660201046bc0de9 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.2E-47 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS02985 dd921ceee4ecdc0aa660201046bc0de9 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.2E-47 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS02985 dd921ceee4ecdc0aa660201046bc0de9 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.2E-47 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS02985 dd921ceee4ecdc0aa660201046bc0de9 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.2E-47 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS02985 dd921ceee4ecdc0aa660201046bc0de9 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.2E-47 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS02985 dd921ceee4ecdc0aa660201046bc0de9 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 3.7E-71 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS02985 dd921ceee4ecdc0aa660201046bc0de9 331 Gene3D G3DSA:3.30.360.10 160 314 6.0E-79 T 29-03-2018 CVS42_RS02985 dd921ceee4ecdc0aa660201046bc0de9 331 SUPERFAMILY SSF55347 149 312 6.55E-78 T 29-03-2018 CVS42_RS02985 dd921ceee4ecdc0aa660201046bc0de9 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 5.0E-137 T 29-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS02985 dd921ceee4ecdc0aa660201046bc0de9 331 Gene3D G3DSA:3.40.50.720 1 159 5.7E-80 T 29-03-2018 CVS42_RS02985 dd921ceee4ecdc0aa660201046bc0de9 331 PIRSF PIRSF000149 1 331 1.7E-134 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS15185 f895f963bfaab6907981df0a985932b0 133 SMART SM00528 87 133 9.2E-18 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CVS42_RS15185 f895f963bfaab6907981df0a985932b0 133 Gene3D G3DSA:1.10.287.1050 1 57 1.6E-20 T 29-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 CVS42_RS15185 f895f963bfaab6907981df0a985932b0 133 PIRSF PIRSF002096 1 133 5.1E-50 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CVS42_RS15185 f895f963bfaab6907981df0a985932b0 133 Pfam PF00816 H-NS histone family 39 126 7.1E-18 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CVS42_RS15185 f895f963bfaab6907981df0a985932b0 133 SUPERFAMILY SSF81273 2 58 3.53E-15 T 29-03-2018 CVS42_RS15185 f895f963bfaab6907981df0a985932b0 133 Gene3D G3DSA:4.10.430.10 93 133 3.1E-15 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CVS42_RS15185 f895f963bfaab6907981df0a985932b0 133 SUPERFAMILY SSF81273 90 133 2.04E-8 T 29-03-2018 CVS42_RS05775 540d08e1ef336efa09fef9bb712d64a5 217 Pfam PF00813 FliP family 14 211 5.4E-68 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS05775 540d08e1ef336efa09fef9bb712d64a5 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 9.5E-70 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS05775 540d08e1ef336efa09fef9bb712d64a5 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 9.5E-70 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS05775 540d08e1ef336efa09fef9bb712d64a5 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 9.5E-70 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS05775 540d08e1ef336efa09fef9bb712d64a5 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 9.5E-70 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS05775 540d08e1ef336efa09fef9bb712d64a5 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 9.5E-70 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS05775 540d08e1ef336efa09fef9bb712d64a5 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 9.5E-70 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS05775 540d08e1ef336efa09fef9bb712d64a5 217 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 2.6E-92 T 29-03-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 CVS42_RS05775 540d08e1ef336efa09fef9bb712d64a5 217 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS05775 540d08e1ef336efa09fef9bb712d64a5 217 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS10890 b6588483111edd11885e2cd5c0af9eb6 533 SUPERFAMILY SSF52096 24 269 6.82E-71 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS10890 b6588483111edd11885e2cd5c0af9eb6 533 Gene3D G3DSA:3.90.226.10 9 272 4.6E-69 T 29-03-2018 CVS42_RS10890 b6588483111edd11885e2cd5c0af9eb6 533 Gene3D G3DSA:3.90.226.10 273 528 3.1E-67 T 29-03-2018 CVS42_RS10890 b6588483111edd11885e2cd5c0af9eb6 533 Pfam PF01039 Carboxyl transferase domain 48 517 1.1E-146 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 CVS42_RS10890 b6588483111edd11885e2cd5c0af9eb6 533 SUPERFAMILY SSF52096 237 515 2.34E-83 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS03265 4245315a901a4458a86c5e7a3c779a3e 295 SUPERFAMILY SSF55846 42 207 2.22E-45 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CVS42_RS03265 4245315a901a4458a86c5e7a3c779a3e 295 Gene3D G3DSA:1.10.101.10 214 292 3.7E-9 T 29-03-2018 IPR002477 Peptidoglycan binding-like CVS42_RS03265 4245315a901a4458a86c5e7a3c779a3e 295 Pfam PF01471 Putative peptidoglycan binding domain 238 286 5.8E-5 T 29-03-2018 IPR002477 Peptidoglycan binding-like CVS42_RS03265 4245315a901a4458a86c5e7a3c779a3e 295 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 57 199 6.4E-29 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CVS42_RS03265 4245315a901a4458a86c5e7a3c779a3e 295 SUPERFAMILY SSF47090 231 295 3.57E-17 T 29-03-2018 IPR002477 Peptidoglycan binding-like CVS42_RS03265 4245315a901a4458a86c5e7a3c779a3e 295 SMART SM00644 47 198 7.2E-26 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CVS42_RS03265 4245315a901a4458a86c5e7a3c779a3e 295 Gene3D G3DSA:3.40.80.10 42 210 1.1E-40 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 6.8E-30 T 29-03-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.7E-23 T 29-03-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 2.6E-155 T 29-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 4.9E-55 T 29-03-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 339 454 2.3E-17 T 29-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 152 222 9.9E-6 T 29-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 SUPERFAMILY SSF64484 343 939 0.0 T 29-03-2018 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 SUPERFAMILY SSF64484 11 226 0.0 T 29-03-2018 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 SUPERFAMILY SSF64484 1039 1340 0.0 T 29-03-2018 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 Gene3D G3DSA:2.40.50.150 829 1044 9.3E-52 T 29-03-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 Gene3D G3DSA:2.40.50.100 715 795 6.6E-27 T 29-03-2018 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 29-03-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 3.6E-27 T 29-03-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 Gene3D G3DSA:2.40.270.10 1045 1242 2.5E-77 T 29-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.299 T 29-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 29-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 Gene3D G3DSA:3.90.1100.10 268 644 3.6E-79 T 29-03-2018 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 Gene3D G3DSA:3.90.1100.10 19 232 4.5E-51 T 29-03-2018 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 Gene3D G3DSA:3.90.1100.10 645 713 1.1E-15 T 29-03-2018 CVS42_RS20635 346d8ed8e71c3999da61ab64a0a6fb74 1342 Gene3D G3DSA:3.90.1800.10 1267 1311 7.4E-12 T 29-03-2018 CVS42_RS20800 5a5337726a5df091c66eef032243ef86 426 Gene3D G3DSA:1.10.8.60 288 351 3.0E-16 T 29-03-2018 CVS42_RS20800 5a5337726a5df091c66eef032243ef86 426 SUPERFAMILY SSF52172 2 176 3.42E-43 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS20800 5a5337726a5df091c66eef032243ef86 426 SUPERFAMILY SSF52540 134 360 4.29E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS20800 5a5337726a5df091c66eef032243ef86 426 Pfam PF00158 Sigma-54 interaction domain 133 281 6.0E-37 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CVS42_RS20800 5a5337726a5df091c66eef032243ef86 426 Gene3D G3DSA:3.40.50.300 124 287 5.0E-23 T 29-03-2018 CVS42_RS20800 5a5337726a5df091c66eef032243ef86 426 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 329 338 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CVS42_RS20800 5a5337726a5df091c66eef032243ef86 426 Gene3D G3DSA:3.40.50.2300 1 123 4.7E-35 T 29-03-2018 CVS42_RS20800 5a5337726a5df091c66eef032243ef86 426 SMART SM00448 2 113 6.1E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS20800 5a5337726a5df091c66eef032243ef86 426 SMART SM00382 152 278 3.3E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS20800 5a5337726a5df091c66eef032243ef86 426 SUPERFAMILY SSF46689 369 417 2.15E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS20800 5a5337726a5df091c66eef032243ef86 426 Gene3D G3DSA:1.10.10.60 352 422 1.8E-11 T 29-03-2018 CVS42_RS20800 5a5337726a5df091c66eef032243ef86 426 Pfam PF00072 Response regulator receiver domain 4 113 4.4E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS16895 79d32005bd47fc02b0f4984384c1d164 182 Gene3D G3DSA:3.40.109.10 1 182 2.4E-33 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CVS42_RS16895 79d32005bd47fc02b0f4984384c1d164 182 SUPERFAMILY SSF55469 1 181 1.31E-39 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CVS42_RS16895 79d32005bd47fc02b0f4984384c1d164 182 PIRSF PIRSF000232 1 182 7.1E-61 T 29-03-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CVS42_RS16895 79d32005bd47fc02b0f4984384c1d164 182 Pfam PF00881 Nitroreductase family 8 161 4.8E-25 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CVS42_RS14795 bfc3df8b61e1afd96846b7146962c03b 159 SUPERFAMILY SSF89562 6 154 8.63E-45 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CVS42_RS14795 bfc3df8b61e1afd96846b7146962c03b 159 TIGRFAM TIGR01935 NOT-MenG: RraA family 6 154 1.3E-62 T 29-03-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 CVS42_RS14795 bfc3df8b61e1afd96846b7146962c03b 159 Gene3D G3DSA:3.50.30.40 4 159 1.2E-41 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CVS42_RS14795 bfc3df8b61e1afd96846b7146962c03b 159 Pfam PF03737 Aldolase/RraA 6 153 9.5E-40 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CVS42_RS10760 33c36cc4157c4edb44ba1b2d8f293ecd 281 Pfam PF06707 Protein of unknown function (DUF1194) 24 228 9.7E-57 T 29-03-2018 IPR010607 Protein of unknown function DUF1194 CVS42_RS10760 33c36cc4157c4edb44ba1b2d8f293ecd 281 SUPERFAMILY SSF53300 24 215 2.83E-15 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS10760 33c36cc4157c4edb44ba1b2d8f293ecd 281 Gene3D G3DSA:3.40.50.410 21 227 1.6E-11 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS06435 6c0b9d45702c39c61195eef1799cbbf6 226 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 215 1.4E-67 T 29-03-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 CVS42_RS06435 6c0b9d45702c39c61195eef1799cbbf6 226 SUPERFAMILY SSF161098 6 214 1.44E-43 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS06435 6c0b9d45702c39c61195eef1799cbbf6 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 214 1.3E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS06435 6c0b9d45702c39c61195eef1799cbbf6 226 Gene3D G3DSA:1.10.3720.10 4 225 1.0E-32 T 29-03-2018 CVS42_RS20185 0675940fa1c3e77962bd2f67f7a9f42d 439 SUPERFAMILY SSF103473 8 431 3.14E-60 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS20185 0675940fa1c3e77962bd2f67f7a9f42d 439 Pfam PF07690 Major Facilitator Superfamily 65 389 2.6E-24 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS20185 0675940fa1c3e77962bd2f67f7a9f42d 439 Gene3D G3DSA:1.20.1250.20 10 235 4.2E-25 T 29-03-2018 CVS42_RS20185 0675940fa1c3e77962bd2f67f7a9f42d 439 Gene3D G3DSA:1.20.1250.20 242 438 2.7E-16 T 29-03-2018 CVS42_RS15955 feb152b9f17b733bde9511ba8b55bcbc 306 Gene3D G3DSA:1.10.8.80 208 301 1.6E-18 T 29-03-2018 CVS42_RS15955 feb152b9f17b733bde9511ba8b55bcbc 306 SUPERFAMILY SSF52540 10 278 1.71E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS15955 feb152b9f17b733bde9511ba8b55bcbc 306 Gene3D G3DSA:3.40.50.300 18 184 1.7E-26 T 29-03-2018 CVS42_RS15955 feb152b9f17b733bde9511ba8b55bcbc 306 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 37 166 8.7E-61 T 29-03-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 CVS42_RS15955 feb152b9f17b733bde9511ba8b55bcbc 306 PIRSF PIRSF002849 1 303 1.8E-107 T 29-03-2018 CVS42_RS18240 0c863b8eff470c49ee310d4401b647f8 262 Pfam PF01578 Cytochrome C assembly protein 43 260 4.7E-36 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CVS42_RS18295 b64b12691b4f718f31d15ebdb4c8cda7 301 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 4 294 3.8E-66 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CVS42_RS18295 b64b12691b4f718f31d15ebdb4c8cda7 301 SUPERFAMILY SSF54909 3 296 6.79E-95 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CVS42_RS18295 b64b12691b4f718f31d15ebdb4c8cda7 301 Pfam PF04261 Dyp-type peroxidase family 42 294 8.1E-67 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CVS42_RS13650 6a907a6f68169d62d74f4fdf3d6dc08f 230 Gene3D G3DSA:3.30.70.1560 144 204 2.3E-22 T 29-03-2018 CVS42_RS13650 6a907a6f68169d62d74f4fdf3d6dc08f 230 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 7.9E-50 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CVS42_RS13650 6a907a6f68169d62d74f4fdf3d6dc08f 230 SUPERFAMILY SSF55174 1 81 4.71E-15 T 29-03-2018 CVS42_RS13650 6a907a6f68169d62d74f4fdf3d6dc08f 230 SMART SM00363 1 60 3.5E-7 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS13650 6a907a6f68169d62d74f4fdf3d6dc08f 230 SUPERFAMILY SSF55120 61 227 2.24E-46 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS13650 6a907a6f68169d62d74f4fdf3d6dc08f 230 Pfam PF01479 S4 domain 1 44 6.8E-8 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS13650 6a907a6f68169d62d74f4fdf3d6dc08f 230 Pfam PF00849 RNA pseudouridylate synthase 62 192 7.8E-16 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS13650 6a907a6f68169d62d74f4fdf3d6dc08f 230 Gene3D G3DSA:3.10.290.10 1 57 2.1E-14 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS13650 6a907a6f68169d62d74f4fdf3d6dc08f 230 Gene3D G3DSA:3.30.70.580 58 143 8.4E-16 T 29-03-2018 CVS42_RS13650 6a907a6f68169d62d74f4fdf3d6dc08f 230 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CVS42_RS05960 db055ecb3e0109838ee41b00ef6efe12 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 4.8E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS05960 db055ecb3e0109838ee41b00ef6efe12 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 4.8E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS05960 db055ecb3e0109838ee41b00ef6efe12 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 3.0E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS05960 db055ecb3e0109838ee41b00ef6efe12 217 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 53 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CVS42_RS05960 db055ecb3e0109838ee41b00ef6efe12 217 SUPERFAMILY SSF46689 4 72 4.82E-18 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS05960 db055ecb3e0109838ee41b00ef6efe12 217 Gene3D G3DSA:1.10.10.60 2 49 5.9E-18 T 29-03-2018 CVS42_RS05960 db055ecb3e0109838ee41b00ef6efe12 217 SUPERFAMILY SSF48498 79 210 6.67E-40 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CVS42_RS05960 db055ecb3e0109838ee41b00ef6efe12 217 Gene3D G3DSA:1.10.357.10 50 212 2.0E-35 T 29-03-2018 CVS42_RS13870 9af9bd988d3c1402d0994dde87435e57 160 Gene3D G3DSA:1.10.10.10 1 158 4.2E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS13870 9af9bd988d3c1402d0994dde87435e57 160 SMART SM00347 44 145 1.8E-24 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS13870 9af9bd988d3c1402d0994dde87435e57 160 Pfam PF01047 MarR family 54 109 2.3E-11 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS13870 9af9bd988d3c1402d0994dde87435e57 160 SUPERFAMILY SSF46785 12 156 3.46E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS13870 9af9bd988d3c1402d0994dde87435e57 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 6.9E-11 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS13870 9af9bd988d3c1402d0994dde87435e57 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 6.9E-11 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS13870 9af9bd988d3c1402d0994dde87435e57 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 6.9E-11 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS09670 489fdd66a6060718281e0a2a12b95ff5 310 PRINTS PR00990 Ribokinase signature 173 188 8.0E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CVS42_RS09670 489fdd66a6060718281e0a2a12b95ff5 310 PRINTS PR00990 Ribokinase signature 105 118 8.0E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CVS42_RS09670 489fdd66a6060718281e0a2a12b95ff5 310 PRINTS PR00990 Ribokinase signature 217 228 8.0E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CVS42_RS09670 489fdd66a6060718281e0a2a12b95ff5 310 PRINTS PR00990 Ribokinase signature 33 52 8.0E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CVS42_RS09670 489fdd66a6060718281e0a2a12b95ff5 310 PRINTS PR00990 Ribokinase signature 6 27 8.0E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CVS42_RS09670 489fdd66a6060718281e0a2a12b95ff5 310 SUPERFAMILY SSF53613 1 302 7.02E-87 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS09670 489fdd66a6060718281e0a2a12b95ff5 310 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 1.7E-113 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CVS42_RS09670 489fdd66a6060718281e0a2a12b95ff5 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CVS42_RS09670 489fdd66a6060718281e0a2a12b95ff5 310 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.302 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CVS42_RS09670 489fdd66a6060718281e0a2a12b95ff5 310 Gene3D G3DSA:3.40.1190.20 1 310 1.7E-85 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS09670 489fdd66a6060718281e0a2a12b95ff5 310 Pfam PF00294 pfkB family carbohydrate kinase 1 294 9.4E-74 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CVS42_RS12220 6486dfae00625b4385467c0059529203 309 Pfam PF16199 Radical_SAM C-terminal domain 208 283 1.4E-20 T 29-03-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 CVS42_RS12220 6486dfae00625b4385467c0059529203 309 Pfam PF04055 Radical SAM superfamily 43 192 5.7E-15 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS12220 6486dfae00625b4385467c0059529203 309 SMART SM00729 23 247 2.1E-40 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CVS42_RS12220 6486dfae00625b4385467c0059529203 309 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 301 1.1E-126 T 29-03-2018 IPR005911 Protein YhcC-like GO:0051536 CVS42_RS12220 6486dfae00625b4385467c0059529203 309 SUPERFAMILY SSF102114 13 262 8.76E-46 T 29-03-2018 CVS42_RS12220 6486dfae00625b4385467c0059529203 309 Gene3D G3DSA:3.20.20.70 2 289 9.4E-37 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS18710 370133ef959d7213dd300c1b5f41a864 287 Gene3D G3DSA:3.20.20.70 145 274 1.3E-41 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS18710 370133ef959d7213dd300c1b5f41a864 287 PIRSF PIRSF006250 1 287 2.0E-103 T 29-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 CVS42_RS18710 370133ef959d7213dd300c1b5f41a864 287 SUPERFAMILY SSF51690 119 284 1.61E-60 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CVS42_RS18710 370133ef959d7213dd300c1b5f41a864 287 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 119 283 6.0E-61 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CVS42_RS18710 370133ef959d7213dd300c1b5f41a864 287 Gene3D G3DSA:3.90.1170.20 1 144 8.1E-47 T 29-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CVS42_RS18710 370133ef959d7213dd300c1b5f41a864 287 SUPERFAMILY SSF54675 2 118 1.79E-30 T 29-03-2018 CVS42_RS18710 370133ef959d7213dd300c1b5f41a864 287 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 30 284 5.1E-95 T 29-03-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 CVS42_RS18710 370133ef959d7213dd300c1b5f41a864 287 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 31 117 2.4E-24 T 29-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CVS42_RS05310 8b34c4c35592e7eb4e9b35efea8d278e 288 SUPERFAMILY SSF53850 86 273 6.21E-8 T 29-03-2018 CVS42_RS05310 8b34c4c35592e7eb4e9b35efea8d278e 288 Pfam PF12728 Helix-turn-helix domain 1 47 6.1E-12 T 29-03-2018 CVS42_RS05310 8b34c4c35592e7eb4e9b35efea8d278e 288 Pfam PF12727 PBP superfamily domain 84 260 8.1E-39 T 29-03-2018 IPR024370 PBP domain CVS42_RS05310 8b34c4c35592e7eb4e9b35efea8d278e 288 Gene3D G3DSA:1.10.10.10 1 49 3.1E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS05310 8b34c4c35592e7eb4e9b35efea8d278e 288 Gene3D G3DSA:3.40.190.10 188 271 0.19 T 29-03-2018 CVS42_RS05310 8b34c4c35592e7eb4e9b35efea8d278e 288 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 3 46 9.8E-9 T 29-03-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 CVS42_RS05310 8b34c4c35592e7eb4e9b35efea8d278e 288 Gene3D G3DSA:3.40.190.10 86 187 2.5E-4 T 29-03-2018 CVS42_RS02725 ea305236927d5e8fc862210cf929d0b9 574 Gene3D G3DSA:3.30.930.10 11 462 6.2E-102 T 29-03-2018 CVS42_RS02725 ea305236927d5e8fc862210cf929d0b9 574 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 461 3.2E-48 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS02725 ea305236927d5e8fc862210cf929d0b9 574 Pfam PF03129 Anticodon binding domain 477 570 2.2E-22 T 29-03-2018 IPR004154 Anticodon-binding CVS42_RS02725 ea305236927d5e8fc862210cf929d0b9 574 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 573 42.443 T 29-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CVS42_RS02725 ea305236927d5e8fc862210cf929d0b9 574 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 2.3E-249 T 29-03-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CVS42_RS02725 ea305236927d5e8fc862210cf929d0b9 574 PIRSF PIRSF001535 1 574 8.0E-274 T 29-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CVS42_RS02725 ea305236927d5e8fc862210cf929d0b9 574 Gene3D G3DSA:3.40.50.800 463 574 2.6E-34 T 29-03-2018 IPR004154 Anticodon-binding CVS42_RS02725 ea305236927d5e8fc862210cf929d0b9 574 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 6.9E-27 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CVS42_RS02725 ea305236927d5e8fc862210cf929d0b9 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.9E-19 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CVS42_RS02725 ea305236927d5e8fc862210cf929d0b9 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.9E-19 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CVS42_RS02725 ea305236927d5e8fc862210cf929d0b9 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.9E-19 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CVS42_RS02725 ea305236927d5e8fc862210cf929d0b9 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.9E-19 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CVS42_RS02725 ea305236927d5e8fc862210cf929d0b9 574 SUPERFAMILY SSF55826 218 392 3.53E-33 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CVS42_RS02725 ea305236927d5e8fc862210cf929d0b9 574 SUPERFAMILY SSF52954 465 572 2.42E-34 T 29-03-2018 IPR004154 Anticodon-binding CVS42_RS02725 ea305236927d5e8fc862210cf929d0b9 574 SUPERFAMILY SSF55681 409 480 1.01E-106 T 29-03-2018 CVS42_RS02725 ea305236927d5e8fc862210cf929d0b9 574 SUPERFAMILY SSF55681 10 237 1.01E-106 T 29-03-2018 CVS42_RS09780 3a40e34e40fb84b74f9ae6bdb21dea70 327 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 116 324 7.6E-60 T 29-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III CVS42_RS09780 3a40e34e40fb84b74f9ae6bdb21dea70 327 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 156 230 3.4E-12 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS09780 3a40e34e40fb84b74f9ae6bdb21dea70 327 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 243 317 2.1E-10 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS09780 3a40e34e40fb84b74f9ae6bdb21dea70 327 SUPERFAMILY SSF46626 55 78 3.76E-28 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS09780 3a40e34e40fb84b74f9ae6bdb21dea70 327 SUPERFAMILY SSF46626 136 237 3.76E-28 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS09780 3a40e34e40fb84b74f9ae6bdb21dea70 327 SUPERFAMILY SSF46626 243 325 4.73E-23 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS09780 3a40e34e40fb84b74f9ae6bdb21dea70 327 PRINTS PR00605 Class IC cytochrome C signature 295 317 4.5E-5 T 29-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CVS42_RS09780 3a40e34e40fb84b74f9ae6bdb21dea70 327 PRINTS PR00605 Class IC cytochrome C signature 251 262 4.5E-5 T 29-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CVS42_RS09780 3a40e34e40fb84b74f9ae6bdb21dea70 327 Gene3D G3DSA:1.10.760.10 90 239 6.9E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS09780 3a40e34e40fb84b74f9ae6bdb21dea70 327 PIRSF PIRSF000006 1 324 2.8E-104 T 29-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III CVS42_RS09780 3a40e34e40fb84b74f9ae6bdb21dea70 327 Gene3D G3DSA:1.10.760.10 240 327 4.4E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS09780 3a40e34e40fb84b74f9ae6bdb21dea70 327 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 1.3E-20 T 29-03-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal CVS42_RS06310 a29f139b0a725669ab066d98130a567f 115 Pfam PF03658 RnfH family Ubiquitin 6 87 9.3E-33 T 29-03-2018 IPR005346 RnfH protein CVS42_RS06310 a29f139b0a725669ab066d98130a567f 115 SUPERFAMILY SSF54285 4 79 3.27E-24 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CVS42_RS06310 a29f139b0a725669ab066d98130a567f 115 Gene3D G3DSA:3.10.20.280 1 88 1.0E-31 T 29-03-2018 IPR005346 RnfH protein CVS42_RS06310 a29f139b0a725669ab066d98130a567f 115 Hamap MF_00460 Protein RnfH [rnfH]. 5 95 23.65 T 29-03-2018 IPR005346 RnfH protein CVS42_RS16600 5dd01342a9fcf905043f5d1857a0334b 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 3.0E-31 T 29-03-2018 CVS42_RS16600 5dd01342a9fcf905043f5d1857a0334b 89 Gene3D G3DSA:1.10.287.10 2 89 4.9E-34 T 29-03-2018 CVS42_RS16600 5dd01342a9fcf905043f5d1857a0334b 89 SMART SM01387 8 88 3.5E-51 T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS16600 5dd01342a9fcf905043f5d1857a0334b 89 SUPERFAMILY SSF47060 3 89 1.94E-34 T 29-03-2018 IPR009068 S15/NS1, RNA-binding CVS42_RS16600 5dd01342a9fcf905043f5d1857a0334b 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.395 T 29-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS16600 5dd01342a9fcf905043f5d1857a0334b 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 2.7E-37 T 29-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS16600 5dd01342a9fcf905043f5d1857a0334b 89 Pfam PF00312 Ribosomal protein S15 8 88 1.5E-36 T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS03645 213ed74e33de9d93638e4e76a00ccf1d 416 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 198 381 6.6E-43 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS03645 213ed74e33de9d93638e4e76a00ccf1d 416 Gene3D G3DSA:1.10.287.950 182 386 2.8E-51 T 29-03-2018 CVS42_RS03645 213ed74e33de9d93638e4e76a00ccf1d 416 SMART SM00304 86 138 0.0013 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS03645 213ed74e33de9d93638e4e76a00ccf1d 416 SMART SM00283 153 414 5.2E-69 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS03645 213ed74e33de9d93638e4e76a00ccf1d 416 SUPERFAMILY SSF58104 106 415 2.75E-73 T 29-03-2018 CVS42_RS03645 213ed74e33de9d93638e4e76a00ccf1d 416 Gene3D G3DSA:1.10.287.950 88 181 5.0E-7 T 29-03-2018 CVS42_RS21370 e394db74b17ba1cb317dffb148a2d440 716 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 475 715 2.8E-97 T 29-03-2018 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain CVS42_RS21370 e394db74b17ba1cb317dffb148a2d440 716 Pfam PF08241 Methyltransferase domain 518 642 1.3E-10 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CVS42_RS21370 e394db74b17ba1cb317dffb148a2d440 716 SUPERFAMILY SSF56436 208 462 4.0E-54 T 29-03-2018 IPR016187 C-type lectin fold CVS42_RS21370 e394db74b17ba1cb317dffb148a2d440 716 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 20 461 2.0E-205 T 29-03-2018 IPR027577 5-histidylcysteine sulfoxide synthase CVS42_RS21370 e394db74b17ba1cb317dffb148a2d440 716 Pfam PF12867 DinB superfamily 44 174 4.3E-9 T 29-03-2018 IPR024775 DinB-like domain CVS42_RS21370 e394db74b17ba1cb317dffb148a2d440 716 SUPERFAMILY SSF53335 585 669 8.51E-27 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS21370 e394db74b17ba1cb317dffb148a2d440 716 SUPERFAMILY SSF53335 475 556 8.51E-27 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS21370 e394db74b17ba1cb317dffb148a2d440 716 Gene3D G3DSA:3.90.1580.10 194 476 1.5E-45 T 29-03-2018 CVS42_RS21370 e394db74b17ba1cb317dffb148a2d440 716 Gene3D G3DSA:3.40.50.150 496 716 1.8E-26 T 29-03-2018 CVS42_RS21370 e394db74b17ba1cb317dffb148a2d440 716 Pfam PF03781 Sulfatase-modifying factor enzyme 1 210 460 4.4E-27 T 29-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 CVS42_RS13235 26365652b6468a55add54aa7e615f42d 539 SMART SM00283 276 537 1.1E-64 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS13235 26365652b6468a55add54aa7e615f42d 539 SUPERFAMILY SSF58104 229 538 1.7E-73 T 29-03-2018 CVS42_RS13235 26365652b6468a55add54aa7e615f42d 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 504 9.9E-45 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS13235 26365652b6468a55add54aa7e615f42d 539 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 181 3.0E-23 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CVS42_RS13235 26365652b6468a55add54aa7e615f42d 539 SMART SM00304 478 534 6.2 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS13235 26365652b6468a55add54aa7e615f42d 539 SMART SM00304 208 261 3.4E-4 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS13235 26365652b6468a55add54aa7e615f42d 539 Gene3D G3DSA:1.10.287.950 311 539 5.0E-54 T 29-03-2018 CVS42_RS13235 26365652b6468a55add54aa7e615f42d 539 Gene3D G3DSA:1.20.120.30 19 182 9.8E-18 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CVS42_RS13235 26365652b6468a55add54aa7e615f42d 539 Gene3D G3DSA:1.10.287.1060 236 310 0.09 T 29-03-2018 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 2.3E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 2.3E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 135 152 2.3E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 81 90 2.3E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 42 64 2.3E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 2.3E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 3.4E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 3.4E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 3.4E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 3.4E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 10 307 37.678 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 Gene3D G3DSA:3.40.50.1370 1 148 8.1E-51 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 11 149 1.5E-44 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 SUPERFAMILY SSF53671 7 307 6.83E-99 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 303 4.6E-32 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 Gene3D G3DSA:3.40.50.1370 149 308 7.5E-52 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS20950 c99d078331205593ada5465c29c366b8 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 11 305 1.9E-117 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS06840 2659fecb673ce1642347ccff82338169 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 5.8E-99 T 29-03-2018 CVS42_RS06840 2659fecb673ce1642347ccff82338169 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 7.6E-87 T 29-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CVS42_RS06840 2659fecb673ce1642347ccff82338169 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 29-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CVS42_RS06840 2659fecb673ce1642347ccff82338169 268 SUPERFAMILY SSF56219 1 267 1.22E-80 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS06840 2659fecb673ce1642347ccff82338169 268 Gene3D G3DSA:3.60.10.10 1 268 4.5E-48 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS06840 2659fecb673ce1642347ccff82338169 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 4.1E-20 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS02740 35738bbe6b5c88c2190b15cb06a9592f 549 Pfam PF02470 MlaD protein 44 135 5.1E-6 T 29-03-2018 IPR003399 Mce/MlaD CVS42_RS02740 35738bbe6b5c88c2190b15cb06a9592f 549 Pfam PF02470 MlaD protein 290 392 5.4E-12 T 29-03-2018 IPR003399 Mce/MlaD CVS42_RS02740 35738bbe6b5c88c2190b15cb06a9592f 549 Gene3D G3DSA:1.20.120.570 399 532 1.2E-6 T 29-03-2018 CVS42_RS02050 e8af471e9ce17317e605f29cc01ec8b7 309 Pfam PF13378 Enolase C-terminal domain-like 113 270 1.2E-16 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CVS42_RS02050 e8af471e9ce17317e605f29cc01ec8b7 309 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 3 301 22.931 T 29-03-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS02050 e8af471e9ce17317e605f29cc01ec8b7 309 SUPERFAMILY SSF51604 93 293 5.11E-44 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CVS42_RS02050 e8af471e9ce17317e605f29cc01ec8b7 309 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 6 285 5.4E-59 T 29-03-2018 CVS42_RS02050 e8af471e9ce17317e605f29cc01ec8b7 309 SUPERFAMILY SSF54826 1 89 3.58E-19 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS02050 e8af471e9ce17317e605f29cc01ec8b7 309 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 153 184 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CVS42_RS02050 e8af471e9ce17317e605f29cc01ec8b7 309 Gene3D G3DSA:3.20.20.120 115 303 4.0E-30 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CVS42_RS02050 e8af471e9ce17317e605f29cc01ec8b7 309 Gene3D G3DSA:3.30.390.10 1 114 9.5E-19 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS02050 e8af471e9ce17317e605f29cc01ec8b7 309 SMART SM00922 107 201 1.3E-8 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CVS42_RS20310 14f6ad56d0720b94985a0141551cf60e 582 Pfam PF00263 Bacterial type II and III secretion system protein 380 559 9.1E-39 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 CVS42_RS20310 14f6ad56d0720b94985a0141551cf60e 582 Pfam PF07655 Secretin N-terminal domain 149 252 8.7E-25 T 29-03-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 CVS42_RS20310 14f6ad56d0720b94985a0141551cf60e 582 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 247 558 8.6E-84 T 29-03-2018 IPR013358 Pilus biogenesis, MshL CVS42_RS20310 14f6ad56d0720b94985a0141551cf60e 582 SMART SM00965 97 145 1.6E-4 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CVS42_RS20310 14f6ad56d0720b94985a0141551cf60e 582 PRINTS PR00811 Bacterial general secretion pathway protein D signature 523 541 7.5E-16 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS20310 14f6ad56d0720b94985a0141551cf60e 582 PRINTS PR00811 Bacterial general secretion pathway protein D signature 281 291 7.5E-16 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS20310 14f6ad56d0720b94985a0141551cf60e 582 PRINTS PR00811 Bacterial general secretion pathway protein D signature 546 560 7.5E-16 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS20310 14f6ad56d0720b94985a0141551cf60e 582 PRINTS PR00811 Bacterial general secretion pathway protein D signature 375 399 7.5E-16 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS01430 b4464a223bb56c7866919a2e49799e9c 258 Gene3D G3DSA:3.40.190.10 20 140 2.8E-10 T 29-03-2018 CVS42_RS01430 b4464a223bb56c7866919a2e49799e9c 258 SMART SM00062 20 245 0.0022 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS01430 b4464a223bb56c7866919a2e49799e9c 258 SUPERFAMILY SSF53850 24 243 2.28E-30 T 29-03-2018 CVS42_RS01430 b4464a223bb56c7866919a2e49799e9c 258 Gene3D G3DSA:3.40.190.10 141 245 3.2E-5 T 29-03-2018 CVS42_RS01430 b4464a223bb56c7866919a2e49799e9c 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 241 2.1E-21 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS04240 230001092f8e022751543323f0df5c21 231 Pfam PF00005 ABC transporter 26 172 5.1E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS04240 230001092f8e022751543323f0df5c21 231 Gene3D G3DSA:3.40.50.300 2 230 4.8E-62 T 29-03-2018 CVS42_RS04240 230001092f8e022751543323f0df5c21 231 SMART SM00382 35 221 1.8E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS04240 230001092f8e022751543323f0df5c21 231 SUPERFAMILY SSF52540 6 223 9.47E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS04240 230001092f8e022751543323f0df5c21 231 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS12875 7d69fea2f04d3e954cf962b09fee7032 248 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 42.265 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CVS42_RS12875 7d69fea2f04d3e954cf962b09fee7032 248 Gene3D G3DSA:3.40.50.150 18 247 1.2E-40 T 29-03-2018 CVS42_RS12875 7d69fea2f04d3e954cf962b09fee7032 248 PIRSF PIRSF006325 1 243 3.3E-115 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CVS42_RS12875 7d69fea2f04d3e954cf962b09fee7032 248 Pfam PF13649 Methyltransferase domain 62 158 2.9E-14 T 29-03-2018 CVS42_RS12875 7d69fea2f04d3e954cf962b09fee7032 248 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 3.7E-110 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CVS42_RS12875 7d69fea2f04d3e954cf962b09fee7032 248 SUPERFAMILY SSF53335 20 242 4.49E-41 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS07885 c3ba4ff1647f9a0edf59f98b361ee6f5 403 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 18 397 5.3E-107 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CVS42_RS07885 c3ba4ff1647f9a0edf59f98b361ee6f5 403 Gene3D G3DSA:1.20.1250.20 209 403 1.4E-12 T 29-03-2018 CVS42_RS07885 c3ba4ff1647f9a0edf59f98b361ee6f5 403 Gene3D G3DSA:1.20.1250.20 7 202 6.6E-32 T 29-03-2018 CVS42_RS07885 c3ba4ff1647f9a0edf59f98b361ee6f5 403 Pfam PF07690 Major Facilitator Superfamily 25 365 4.1E-42 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS07885 c3ba4ff1647f9a0edf59f98b361ee6f5 403 SUPERFAMILY SSF103473 14 398 1.83E-61 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS17170 4ee400845ba36569f28f07ba78865b46 814 Pfam PF04453 Organic solvent tolerance protein 320 722 1.0E-78 T 29-03-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 CVS42_RS17170 4ee400845ba36569f28f07ba78865b46 814 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 14 787 19.145 T 29-03-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 CVS42_RS17170 4ee400845ba36569f28f07ba78865b46 814 Gene3D G3DSA:2.60.450.10 57 210 9.5E-18 T 29-03-2018 CVS42_RS17170 4ee400845ba36569f28f07ba78865b46 814 Pfam PF03968 OstA-like protein 67 200 1.6E-13 T 29-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal CVS42_RS17645 3a39542cff57267fe80f597b79582382 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 29-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CVS42_RS17645 3a39542cff57267fe80f597b79582382 544 Hamap MF_00600 60 kDa chaperonin [groL]. 2 541 41.208 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CVS42_RS17645 3a39542cff57267fe80f597b79582382 544 Gene3D G3DSA:1.10.560.10 374 516 1.5E-21 T 29-03-2018 IPR027413 GroEL-like equatorial domain CVS42_RS17645 3a39542cff57267fe80f597b79582382 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 7.5E-93 T 29-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CVS42_RS17645 3a39542cff57267fe80f597b79582382 544 Gene3D G3DSA:3.50.7.10 185 373 1.9E-96 T 29-03-2018 IPR027409 GroEL-like apical domain CVS42_RS17645 3a39542cff57267fe80f597b79582382 544 SUPERFAMILY SSF54849 137 204 5.26E-24 T 29-03-2018 CVS42_RS17645 3a39542cff57267fe80f597b79582382 544 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CVS42_RS17645 3a39542cff57267fe80f597b79582382 544 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CVS42_RS17645 3a39542cff57267fe80f597b79582382 544 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CVS42_RS17645 3a39542cff57267fe80f597b79582382 544 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CVS42_RS17645 3a39542cff57267fe80f597b79582382 544 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CVS42_RS17645 3a39542cff57267fe80f597b79582382 544 Gene3D G3DSA:1.10.560.10 1 184 8.1E-43 T 29-03-2018 IPR027413 GroEL-like equatorial domain CVS42_RS17645 3a39542cff57267fe80f597b79582382 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 3.8E-253 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CVS42_RS17645 3a39542cff57267fe80f597b79582382 544 SUPERFAMILY SSF48592 406 521 3.33E-74 T 29-03-2018 CVS42_RS17645 3a39542cff57267fe80f597b79582382 544 SUPERFAMILY SSF48592 7 134 3.33E-74 T 29-03-2018 CVS42_RS17645 3a39542cff57267fe80f597b79582382 544 SUPERFAMILY SSF52029 184 376 1.74E-82 T 29-03-2018 IPR027409 GroEL-like apical domain CVS42_RS12405 13b995b138926d261a6ae30929dc2436 214 SMART SM00448 2 115 3.4E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS12405 13b995b138926d261a6ae30929dc2436 214 SUPERFAMILY SSF46894 136 210 6.46E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS12405 13b995b138926d261a6ae30929dc2436 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 203 2.5E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS12405 13b995b138926d261a6ae30929dc2436 214 Pfam PF00072 Response regulator receiver domain 4 116 2.6E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS12405 13b995b138926d261a6ae30929dc2436 214 Gene3D G3DSA:1.10.10.10 127 213 6.0E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS12405 13b995b138926d261a6ae30929dc2436 214 Gene3D G3DSA:3.40.50.2300 1 126 1.4E-35 T 29-03-2018 CVS42_RS12405 13b995b138926d261a6ae30929dc2436 214 SUPERFAMILY SSF52172 2 132 5.98E-36 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS12405 13b995b138926d261a6ae30929dc2436 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS12405 13b995b138926d261a6ae30929dc2436 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS12405 13b995b138926d261a6ae30929dc2436 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS12405 13b995b138926d261a6ae30929dc2436 214 SMART SM00421 146 203 2.4E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS12405 13b995b138926d261a6ae30929dc2436 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS12830 c8be0067b0470a08006d6440ff14d135 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 301 4.4E-27 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS12830 c8be0067b0470a08006d6440ff14d135 303 Gene3D G3DSA:1.10.3720.10 29 292 8.8E-40 T 29-03-2018 CVS42_RS12830 c8be0067b0470a08006d6440ff14d135 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 65 3.5E-13 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CVS42_RS12830 c8be0067b0470a08006d6440ff14d135 303 SUPERFAMILY SSF161098 100 284 6.15E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS19685 71328c7eff9afdf9a53e0e94e6833fca 430 Pfam PF00571 CBS domain 294 330 1.4E-4 T 29-03-2018 IPR000644 CBS domain CVS42_RS19685 71328c7eff9afdf9a53e0e94e6833fca 430 Gene3D G3DSA:3.10.580.10 192 341 4.4E-25 T 29-03-2018 CVS42_RS19685 71328c7eff9afdf9a53e0e94e6833fca 430 Gene3D G3DSA:3.30.465.10 342 430 4.1E-21 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CVS42_RS19685 71328c7eff9afdf9a53e0e94e6833fca 430 SMART SM01091 344 426 1.7E-26 T 29-03-2018 IPR005170 Transporter-associated domain CVS42_RS19685 71328c7eff9afdf9a53e0e94e6833fca 430 Pfam PF01595 Domain of unknown function DUF21 4 195 6.7E-46 T 29-03-2018 IPR002550 Domain of unknown function DUF21 CVS42_RS19685 71328c7eff9afdf9a53e0e94e6833fca 430 SUPERFAMILY SSF56176 342 428 3.82E-21 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CVS42_RS19685 71328c7eff9afdf9a53e0e94e6833fca 430 SUPERFAMILY SSF54631 199 333 1.11E-24 T 29-03-2018 CVS42_RS19685 71328c7eff9afdf9a53e0e94e6833fca 430 Pfam PF03471 Transporter associated domain 346 421 4.9E-20 T 29-03-2018 IPR005170 Transporter-associated domain CVS42_RS21560 caab34002be7391a9b6578c06a6697c0 421 Pfam PF00534 Glycosyl transferases group 1 247 398 7.4E-9 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CVS42_RS21560 caab34002be7391a9b6578c06a6697c0 421 Gene3D G3DSA:3.40.50.2000 49 169 0.0033 T 29-03-2018 CVS42_RS21560 caab34002be7391a9b6578c06a6697c0 421 SUPERFAMILY SSF53756 59 415 3.06E-23 T 29-03-2018 CVS42_RS21560 caab34002be7391a9b6578c06a6697c0 421 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 211 3.1E-61 T 29-03-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 CVS42_RS21560 caab34002be7391a9b6578c06a6697c0 421 Gene3D G3DSA:3.40.50.2000 210 402 2.4E-23 T 29-03-2018 CVS42_RS18595 07142b5529b37383c7546b02f4016e5c 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 267 1.0E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS18595 07142b5529b37383c7546b02f4016e5c 279 SUPERFAMILY SSF161098 16 266 7.2E-56 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS18595 07142b5529b37383c7546b02f4016e5c 279 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 8 270 6.9E-121 T 29-03-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 CVS42_RS18595 07142b5529b37383c7546b02f4016e5c 279 Gene3D G3DSA:1.10.3720.10 15 272 2.1E-45 T 29-03-2018 CVS42_RS18595 07142b5529b37383c7546b02f4016e5c 279 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 14 268 6.9E-93 T 29-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CVS42_RS13315 eebc062788d47ed44e77856889f31ee6 433 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 24 43 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CVS42_RS13315 eebc062788d47ed44e77856889f31ee6 433 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 19 395 6.8E-156 T 29-03-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CVS42_RS13315 eebc062788d47ed44e77856889f31ee6 433 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 15 421 51.886 T 29-03-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CVS42_RS13315 eebc062788d47ed44e77856889f31ee6 433 SUPERFAMILY SSF53448 18 292 6.08E-78 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS13315 eebc062788d47ed44e77856889f31ee6 433 SUPERFAMILY SSF53448 359 375 6.08E-78 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS13315 eebc062788d47ed44e77856889f31ee6 433 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 209 219 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CVS42_RS13315 eebc062788d47ed44e77856889f31ee6 433 Gene3D G3DSA:2.160.10.10 305 419 9.3E-9 T 29-03-2018 CVS42_RS13315 eebc062788d47ed44e77856889f31ee6 433 Gene3D G3DSA:3.90.550.10 18 304 1.6E-66 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS13315 eebc062788d47ed44e77856889f31ee6 433 Pfam PF00483 Nucleotidyl transferase 20 289 1.8E-68 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CVS42_RS13315 eebc062788d47ed44e77856889f31ee6 433 SUPERFAMILY SSF51161 310 409 1.94E-16 T 29-03-2018 IPR011004 Trimeric LpxA-like CVS42_RS13315 eebc062788d47ed44e77856889f31ee6 433 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 111 119 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CVS42_RS01795 806a56c2f49159f54ba785dc2ee90776 123 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 5.6E-31 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CVS42_RS01795 806a56c2f49159f54ba785dc2ee90776 123 Gene3D G3DSA:3.30.1130.10 1 122 1.8E-34 T 29-03-2018 CVS42_RS01795 806a56c2f49159f54ba785dc2ee90776 123 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 113 8.9E-25 T 29-03-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CVS42_RS01795 806a56c2f49159f54ba785dc2ee90776 123 SUPERFAMILY SSF55620 1 116 1.11E-33 T 29-03-2018 CVS42_RS01795 806a56c2f49159f54ba785dc2ee90776 123 Pfam PF02152 Dihydroneopterin aldolase 4 112 1.8E-28 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CVS42_RS01795 806a56c2f49159f54ba785dc2ee90776 123 SMART SM00905 4 114 4.9E-45 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CVS42_RS07745 2ab240c4d2acd0285aa984ffe24e452d 338 Gene3D G3DSA:3.40.50.720 1 143 2.0E-33 T 29-03-2018 CVS42_RS07745 2ab240c4d2acd0285aa984ffe24e452d 338 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 320 1.0E-64 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CVS42_RS07745 2ab240c4d2acd0285aa984ffe24e452d 338 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 29-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS07745 2ab240c4d2acd0285aa984ffe24e452d 338 PIRSF PIRSF000148 4 338 7.0E-140 T 29-03-2018 CVS42_RS07745 2ab240c4d2acd0285aa984ffe24e452d 338 SUPERFAMILY SSF51735 5 159 7.49E-55 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS07745 2ab240c4d2acd0285aa984ffe24e452d 338 SMART SM00859 6 121 6.0E-45 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CVS42_RS07745 2ab240c4d2acd0285aa984ffe24e452d 338 SUPERFAMILY SSF55347 131 321 2.35E-80 T 29-03-2018 CVS42_RS07745 2ab240c4d2acd0285aa984ffe24e452d 338 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 335 5.0E-139 T 29-03-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS07745 2ab240c4d2acd0285aa984ffe24e452d 338 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 119 1.1E-32 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CVS42_RS07745 2ab240c4d2acd0285aa984ffe24e452d 338 Gene3D G3DSA:3.30.360.10 144 316 7.5E-79 T 29-03-2018 CVS42_RS07745 2ab240c4d2acd0285aa984ffe24e452d 338 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 334 38.921 T 29-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS15215 22dc1e4ed46b43a9a198f2daffb8aa60 120 Gene3D G3DSA:1.10.10.60 5 36 5.7E-8 T 29-03-2018 CVS42_RS15215 22dc1e4ed46b43a9a198f2daffb8aa60 120 Gene3D G3DSA:3.30.1190.10 37 119 1.2E-12 T 29-03-2018 CVS42_RS15215 22dc1e4ed46b43a9a198f2daffb8aa60 120 Pfam PF01381 Helix-turn-helix 17 71 5.2E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS15215 22dc1e4ed46b43a9a198f2daffb8aa60 120 SUPERFAMILY SSF47413 10 76 2.6E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS15215 22dc1e4ed46b43a9a198f2daffb8aa60 120 SMART SM00530 16 71 1.6E-12 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS17890 5e2c075d25a2dda5f21da5530d5ec8c1 532 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 20 524 1.9E-201 T 29-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CVS42_RS17890 5e2c075d25a2dda5f21da5530d5ec8c1 532 SUPERFAMILY SSF55931 10 522 7.85E-196 T 29-03-2018 CVS42_RS17890 5e2c075d25a2dda5f21da5530d5ec8c1 532 Pfam PF04262 Glutamate-cysteine ligase 13 386 1.8E-168 T 29-03-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CVS42_RS17890 5e2c075d25a2dda5f21da5530d5ec8c1 532 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 532 220.288 T 29-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CVS42_RS15335 75a89d6c41c59f0171122c902a7b0253 304 Gene3D G3DSA:3.40.50.720 1 128 3.2E-31 T 29-03-2018 CVS42_RS15335 75a89d6c41c59f0171122c902a7b0253 304 Gene3D G3DSA:3.30.360.10 129 303 1.8E-10 T 29-03-2018 CVS42_RS15335 75a89d6c41c59f0171122c902a7b0253 304 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 118 7.9E-19 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CVS42_RS15335 75a89d6c41c59f0171122c902a7b0253 304 SUPERFAMILY SSF51735 1 132 1.39E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS15335 75a89d6c41c59f0171122c902a7b0253 304 SUPERFAMILY SSF55347 121 260 3.6E-33 T 29-03-2018 CVS42_RS14200 0dbb7f4bb516bc041c9d9eb020119c74 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CVS42_RS14200 0dbb7f4bb516bc041c9d9eb020119c74 383 Gene3D G3DSA:1.20.1090.10 184 383 4.1E-66 T 29-03-2018 CVS42_RS14200 0dbb7f4bb516bc041c9d9eb020119c74 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CVS42_RS14200 0dbb7f4bb516bc041c9d9eb020119c74 383 Gene3D G3DSA:3.40.50.1970 9 182 3.0E-49 T 29-03-2018 CVS42_RS14200 0dbb7f4bb516bc041c9d9eb020119c74 383 SUPERFAMILY SSF56796 3 382 2.36E-133 T 29-03-2018 CVS42_RS14200 0dbb7f4bb516bc041c9d9eb020119c74 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 375 5.8E-126 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CVS42_RS05255 7a6b9c73fbf219112c119ae31731f8df 433 SMART SM00283 226 430 5.1E-19 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS05255 7a6b9c73fbf219112c119ae31731f8df 433 Gene3D G3DSA:3.40.50.10600 12 137 9.9E-30 T 29-03-2018 CVS42_RS05255 7a6b9c73fbf219112c119ae31731f8df 433 Gene3D G3DSA:3.40.50.10600 138 253 2.0E-25 T 29-03-2018 CVS42_RS05255 7a6b9c73fbf219112c119ae31731f8df 433 SMART SM00086 93 134 0.0012 T 29-03-2018 IPR001610 PAC motif CVS42_RS05255 7a6b9c73fbf219112c119ae31731f8df 433 SMART SM00086 212 254 0.026 T 29-03-2018 IPR001610 PAC motif CVS42_RS05255 7a6b9c73fbf219112c119ae31731f8df 433 Pfam PF08447 PAS fold 164 247 1.6E-9 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CVS42_RS05255 7a6b9c73fbf219112c119ae31731f8df 433 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 151 260 2.9E-13 T 29-03-2018 IPR000014 PAS domain CVS42_RS05255 7a6b9c73fbf219112c119ae31731f8df 433 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 136 2.2E-16 T 29-03-2018 IPR000014 PAS domain CVS42_RS05255 7a6b9c73fbf219112c119ae31731f8df 433 Pfam PF13426 PAS domain 36 133 5.8E-13 T 29-03-2018 IPR000014 PAS domain CVS42_RS05255 7a6b9c73fbf219112c119ae31731f8df 433 SUPERFAMILY SSF55785 31 133 5.41E-22 T 29-03-2018 IPR000014 PAS domain CVS42_RS05255 7a6b9c73fbf219112c119ae31731f8df 433 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 299 431 1.7E-34 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS05255 7a6b9c73fbf219112c119ae31731f8df 433 SUPERFAMILY SSF55785 153 254 4.36E-19 T 29-03-2018 IPR000014 PAS domain CVS42_RS05255 7a6b9c73fbf219112c119ae31731f8df 433 SUPERFAMILY SSF58104 246 430 5.1E-48 T 29-03-2018 CVS42_RS05255 7a6b9c73fbf219112c119ae31731f8df 433 Gene3D G3DSA:1.10.287.950 254 433 3.1E-41 T 29-03-2018 CVS42_RS05255 7a6b9c73fbf219112c119ae31731f8df 433 SMART SM00091 18 91 0.0052 T 29-03-2018 IPR000014 PAS domain CVS42_RS05255 7a6b9c73fbf219112c119ae31731f8df 433 SMART SM00091 139 210 2.4 T 29-03-2018 IPR000014 PAS domain CVS42_RS21535 4ad4374ab03eb329ac1b0cef55547bc2 144 Pfam PF03748 Flagellar basal body-associated protein FliL 42 144 3.1E-19 T 29-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CVS42_RS00850 a681317bdeba85b8c424857c2960fd1a 475 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 461 41.775 T 29-03-2018 IPR003846 Uncharacterised protein family UPF0061 CVS42_RS00850 a681317bdeba85b8c424857c2960fd1a 475 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 16 445 2.0E-136 T 29-03-2018 IPR003846 Uncharacterised protein family UPF0061 CVS42_RS00850 a681317bdeba85b8c424857c2960fd1a 475 Gene3D G3DSA:1.10.357.10 107 352 7.0E-4 T 29-03-2018 CVS42_RS08030 162139ef488daa5814b426c22540b8b3 451 SUPERFAMILY SSF56349 148 426 2.0E-48 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CVS42_RS08030 162139ef488daa5814b426c22540b8b3 451 Gene3D G3DSA:1.10.150.130 137 254 3.6E-18 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CVS42_RS08030 162139ef488daa5814b426c22540b8b3 451 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 155 204 2.2E-5 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CVS42_RS08030 162139ef488daa5814b426c22540b8b3 451 Pfam PF00589 Phage integrase family 256 390 5.0E-17 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS08030 162139ef488daa5814b426c22540b8b3 451 Gene3D G3DSA:1.10.443.10 255 432 2.1E-21 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS08030 162139ef488daa5814b426c22540b8b3 451 Pfam PF13356 Arm DNA-binding domain 74 132 3.5E-7 T 29-03-2018 IPR025166 Integrase, DNA-binding domain CVS42_RS10495 d3bf07b2bf8ca6443c88590afe7cee65 461 Pfam PF01212 Beta-eliminating lyase 46 427 4.0E-95 T 29-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 CVS42_RS10495 d3bf07b2bf8ca6443c88590afe7cee65 461 Gene3D G3DSA:3.90.1150.10 278 459 2.0E-75 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS10495 d3bf07b2bf8ca6443c88590afe7cee65 461 Gene3D G3DSA:3.90.1150.10 17 113 4.0E-26 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS10495 d3bf07b2bf8ca6443c88590afe7cee65 461 Hamap MF_00544 Tryptophanase [tnaA]. 1 461 105.917 T 29-03-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 CVS42_RS10495 d3bf07b2bf8ca6443c88590afe7cee65 461 SUPERFAMILY SSF53383 2 461 7.43E-139 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS10495 d3bf07b2bf8ca6443c88590afe7cee65 461 PIRSF PIRSF001386 1 461 2.8E-219 T 29-03-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 CVS42_RS01350 face742176a8360dd5cf2d4f4a2fd2dd 335 Gene3D G3DSA:3.40.50.300 2 238 4.5E-76 T 29-03-2018 CVS42_RS01350 face742176a8360dd5cf2d4f4a2fd2dd 335 SUPERFAMILY SSF52540 4 240 6.41E-86 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS01350 face742176a8360dd5cf2d4f4a2fd2dd 335 Pfam PF00005 ABC transporter 20 161 6.5E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS01350 face742176a8360dd5cf2d4f4a2fd2dd 335 Pfam PF08402 TOBE domain 257 330 1.8E-7 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CVS42_RS01350 face742176a8360dd5cf2d4f4a2fd2dd 335 SUPERFAMILY SSF50331 256 329 1.02E-6 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CVS42_RS01350 face742176a8360dd5cf2d4f4a2fd2dd 335 SMART SM00382 28 211 2.7E-20 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS01350 face742176a8360dd5cf2d4f4a2fd2dd 335 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS09785 978eda8e446f9e66e380823a3d8e2a8b 59 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 1 45 2.0E-11 T 29-03-2018 IPR008621 Cbb3-type cytochrome oxidase component CVS42_RS18250 2e58477ec7d953a2360b97b7152b8c32 156 Gene3D G3DSA:1.10.10.10 1 139 7.9E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18250 2e58477ec7d953a2360b97b7152b8c32 156 Pfam PF02082 Transcriptional regulator 1 83 2.9E-23 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CVS42_RS18250 2e58477ec7d953a2360b97b7152b8c32 156 SUPERFAMILY SSF46785 2 133 7.31E-33 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18250 2e58477ec7d953a2360b97b7152b8c32 156 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 129 1.3E-33 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CVS42_RS07285 d6c5de4dde96cf5f57a20d563ca44e86 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 70 21.583 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 CVS42_RS07285 d6c5de4dde96cf5f57a20d563ca44e86 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 68 7.0E-33 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 CVS42_RS07285 d6c5de4dde96cf5f57a20d563ca44e86 75 Gene3D G3DSA:1.10.3390.10 2 70 4.3E-31 T 29-03-2018 IPR023202 YejL-like domain CVS42_RS07285 d6c5de4dde96cf5f57a20d563ca44e86 75 SUPERFAMILY SSF158651 1 72 4.58E-27 T 29-03-2018 IPR023202 YejL-like domain CVS42_RS07285 d6c5de4dde96cf5f57a20d563ca44e86 75 PIRSF PIRSF006188 1 71 1.5E-29 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 CVS42_RS07285 d6c5de4dde96cf5f57a20d563ca44e86 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 68 2.7E-21 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 SUPERFAMILY SSF158472 199 248 1.83E-6 T 29-03-2018 CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 SUPERFAMILY SSF47226 793 902 3.01E-12 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 Gene3D G3DSA:3.40.50.2300 529 649 8.7E-4 T 29-03-2018 CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 1.3E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 SUPERFAMILY SSF52172 663 819 1.71E-37 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 Gene3D G3DSA:3.30.565.10 359 526 2.6E-48 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 174 1.6E-51 T 29-03-2018 IPR019247 Histidine kinase BarA, N-terminal CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 SUPERFAMILY SSF55874 344 515 6.42E-45 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 SUPERFAMILY SSF47384 275 356 2.75E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 Pfam PF01627 Hpt domain 812 896 2.4E-8 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 SUPERFAMILY SSF52172 529 647 5.98E-6 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 1.7E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 1.7E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 1.7E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 1.7E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 517 2.5E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 SMART SM00448 665 778 3.3E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 SMART SM00387 402 518 9.2E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 SMART SM00304 198 250 1.2E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 Gene3D G3DSA:1.10.287.130 279 351 4.8E-21 T 29-03-2018 CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 Gene3D G3DSA:1.20.120.160 792 902 4.6E-12 T 29-03-2018 CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 Pfam PF00072 Response regulator receiver domain 667 778 3.7E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 Gene3D G3DSA:3.40.50.2300 650 791 5.2E-41 T 29-03-2018 CVS42_RS03275 c19f57fc81685cb1d4dfc31cbf97e876 905 SMART SM00388 290 355 1.3E-23 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 Pfam PF01627 Hpt domain 1325 1399 1.1E-8 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 SMART SM00387 932 1043 1.6E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 SUPERFAMILY SSF47384 805 886 5.1E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 Pfam PF08448 PAS fold 564 670 7.3E-8 T 29-03-2018 IPR013656 PAS fold-4 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 SMART SM00062 290 504 6.0E-20 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 SMART SM00062 45 260 3.1E-4 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 SUPERFAMILY SSF55785 543 667 4.19E-11 T 29-03-2018 IPR000014 PAS domain CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 291 502 4.4E-22 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 54 249 1.1E-15 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 Gene3D G3DSA:3.40.190.10 145 225 0.063 T 29-03-2018 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 Gene3D G3DSA:3.40.190.10 410 509 1.7E-4 T 29-03-2018 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 Pfam PF00072 Response regulator receiver domain 1176 1285 1.5E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 678 807 2.5E-6 T 29-03-2018 IPR000014 PAS domain CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 933 1041 2.3E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 Gene3D G3DSA:3.40.190.10 274 409 6.4E-15 T 29-03-2018 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 Gene3D G3DSA:3.40.190.10 29 144 2.2E-15 T 29-03-2018 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 Gene3D G3DSA:3.30.565.10 880 1043 5.3E-47 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1003 1021 7.8E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1027 1040 7.8E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 PRINTS PR00344 Bacterial sensor protein C-terminal signature 968 982 7.8E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 PRINTS PR00344 Bacterial sensor protein C-terminal signature 986 996 7.8E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 SUPERFAMILY SSF55874 874 1041 6.55E-47 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 SUPERFAMILY SSF47226 1268 1404 4.71E-18 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 Gene3D G3DSA:1.20.120.160 1288 1404 1.0E-15 T 29-03-2018 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 Gene3D G3DSA:1.10.287.130 818 879 1.4E-19 T 29-03-2018 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 SUPERFAMILY SSF52172 1175 1297 3.13E-33 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 SUPERFAMILY SSF55785 666 798 8.76E-9 T 29-03-2018 IPR000014 PAS domain CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 Gene3D G3DSA:3.30.450.20 671 817 1.4E-17 T 29-03-2018 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 SUPERFAMILY SSF53850 37 253 4.93E-23 T 29-03-2018 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 SMART SM00388 820 885 8.2E-24 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 SMART SM00073 1314 1412 4.5E-5 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 Gene3D G3DSA:3.30.450.20 537 670 7.0E-17 T 29-03-2018 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 Gene3D G3DSA:3.40.50.2300 1161 1287 1.6E-35 T 29-03-2018 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 Pfam PF00512 His Kinase A (phospho-acceptor) domain 821 885 1.4E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 SUPERFAMILY SSF53850 283 506 8.69E-33 T 29-03-2018 CVS42_RS06290 8ce02abdf4236ec308f98871009a80ec 1414 SMART SM00448 1174 1285 2.5E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS22195 83eed6ba1a3fa97546524eada551ee82 294 SUPERFAMILY SSF53807 28 283 3.53E-49 T 29-03-2018 CVS42_RS22195 83eed6ba1a3fa97546524eada551ee82 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 77 92 2.5E-20 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CVS42_RS22195 83eed6ba1a3fa97546524eada551ee82 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 46 64 2.5E-20 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CVS42_RS22195 83eed6ba1a3fa97546524eada551ee82 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 199 217 2.5E-20 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CVS42_RS22195 83eed6ba1a3fa97546524eada551ee82 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 264 277 2.5E-20 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CVS42_RS22195 83eed6ba1a3fa97546524eada551ee82 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 175 190 2.5E-20 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CVS42_RS22195 83eed6ba1a3fa97546524eada551ee82 294 Gene3D G3DSA:3.40.50.1980 127 287 4.2E-25 T 29-03-2018 CVS42_RS22195 83eed6ba1a3fa97546524eada551ee82 294 Gene3D G3DSA:3.40.50.1980 16 126 2.1E-16 T 29-03-2018 CVS42_RS22195 83eed6ba1a3fa97546524eada551ee82 294 Pfam PF01497 Periplasmic binding protein 29 262 1.6E-22 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.6E-12 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 300 312 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 SUPERFAMILY SSF81923 1 142 1.22E-58 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 Gene3D G3DSA:1.10.1780.10 1 143 8.9E-27 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 209 298 2.1E-11 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 516 534 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 Gene3D G3DSA:3.40.50.300 163 348 5.9E-26 T 29-03-2018 CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 651 731 1.2E-23 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 Pfam PF07724 AAA domain (Cdc48 subfamily) 484 644 7.9E-49 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 SMART SM01086 651 740 2.1E-35 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 Gene3D G3DSA:1.10.8.60 349 464 1.2E-27 T 29-03-2018 CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 Gene3D G3DSA:3.40.50.300 465 651 1.6E-32 T 29-03-2018 CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 SMART SM00382 485 652 2.9E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 SMART SM00382 204 350 1.7E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 SUPERFAMILY SSF52540 167 422 1.95E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 732 0.0 T 29-03-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 560 578 3.1E-36 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 593 607 3.1E-36 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 531 549 3.1E-36 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 489 507 3.1E-36 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 SUPERFAMILY SSF52540 435 734 7.31E-76 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11740 30664ab0ac5ec55c49216d69539e42af 751 Gene3D G3DSA:1.10.8.60 652 750 1.2E-21 T 29-03-2018 CVS42_RS20600 cd8d53d0857537191d47da4a0da220e7 124 PIRSF PIRSF002133 1 124 5.8E-54 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS20600 cd8d53d0857537191d47da4a0da220e7 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.783 T 29-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS20600 cd8d53d0857537191d47da4a0da220e7 124 Pfam PF00164 Ribosomal protein S12/S23 14 123 5.5E-43 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS20600 cd8d53d0857537191d47da4a0da220e7 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS20600 cd8d53d0857537191d47da4a0da220e7 124 Gene3D G3DSA:2.40.50.140 1 124 4.2E-64 T 29-03-2018 CVS42_RS20600 cd8d53d0857537191d47da4a0da220e7 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS20600 cd8d53d0857537191d47da4a0da220e7 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS20600 cd8d53d0857537191d47da4a0da220e7 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS20600 cd8d53d0857537191d47da4a0da220e7 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS20600 cd8d53d0857537191d47da4a0da220e7 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS20600 cd8d53d0857537191d47da4a0da220e7 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS20600 cd8d53d0857537191d47da4a0da220e7 124 SUPERFAMILY SSF50249 3 123 1.8E-52 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS20600 cd8d53d0857537191d47da4a0da220e7 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 4.5E-70 T 29-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS05795 4ad276cbd30cb5283d9850a8eea8bfd1 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 350 359 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS05795 4ad276cbd30cb5283d9850a8eea8bfd1 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 359 1.0E-77 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS05795 4ad276cbd30cb5283d9850a8eea8bfd1 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 12 439 2.2E-169 T 29-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS05795 4ad276cbd30cb5283d9850a8eea8bfd1 440 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 93 9.1E-10 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS05795 4ad276cbd30cb5283d9850a8eea8bfd1 440 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 22 439 2.1E-195 T 29-03-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS05795 4ad276cbd30cb5283d9850a8eea8bfd1 440 SUPERFAMILY SSF52540 96 365 1.58E-95 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS05795 4ad276cbd30cb5283d9850a8eea8bfd1 440 Gene3D G3DSA:3.40.50.300 75 359 4.7E-86 T 29-03-2018 CVS42_RS05795 4ad276cbd30cb5283d9850a8eea8bfd1 440 SMART SM00382 162 343 6.8E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS13945 cc10e7a0139eba246be0de969e8f3ad8 404 Gene3D G3DSA:3.30.420.40 206 399 2.3E-46 T 29-03-2018 CVS42_RS13945 cc10e7a0139eba246be0de969e8f3ad8 404 SUPERFAMILY SSF53067 85 391 8.82E-55 T 29-03-2018 CVS42_RS13945 cc10e7a0139eba246be0de969e8f3ad8 404 SUPERFAMILY SSF46785 11 75 1.62E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS13945 cc10e7a0139eba246be0de969e8f3ad8 404 Gene3D G3DSA:1.10.10.10 17 77 3.5E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS13945 cc10e7a0139eba246be0de969e8f3ad8 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CVS42_RS13945 cc10e7a0139eba246be0de969e8f3ad8 404 Pfam PF00480 ROK family 89 389 1.1E-71 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CVS42_RS13945 cc10e7a0139eba246be0de969e8f3ad8 404 Gene3D G3DSA:3.30.420.40 78 205 2.9E-17 T 29-03-2018 CVS42_RS20920 571cf77a05d8cb80f80e37f8cd58351d 170 Pfam PF08212 Lipocalin-like domain 30 168 3.2E-45 T 29-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CVS42_RS20920 571cf77a05d8cb80f80e37f8cd58351d 170 PIRSF PIRSF036893 1 170 4.7E-48 T 29-03-2018 IPR022271 Lipocalin, ApoD type CVS42_RS20920 571cf77a05d8cb80f80e37f8cd58351d 170 SUPERFAMILY SSF50814 5 169 1.78E-52 T 29-03-2018 IPR012674 Calycin CVS42_RS20920 571cf77a05d8cb80f80e37f8cd58351d 170 Gene3D G3DSA:2.40.128.20 1 170 2.9E-44 T 29-03-2018 IPR012674 Calycin CVS42_RS20920 571cf77a05d8cb80f80e37f8cd58351d 170 PRINTS PR01171 Bacterial lipocalin signature 115 123 2.2E-38 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CVS42_RS20920 571cf77a05d8cb80f80e37f8cd58351d 170 PRINTS PR01171 Bacterial lipocalin signature 157 167 2.2E-38 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CVS42_RS20920 571cf77a05d8cb80f80e37f8cd58351d 170 PRINTS PR01171 Bacterial lipocalin signature 29 43 2.2E-38 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CVS42_RS20920 571cf77a05d8cb80f80e37f8cd58351d 170 PRINTS PR01171 Bacterial lipocalin signature 65 74 2.2E-38 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CVS42_RS20920 571cf77a05d8cb80f80e37f8cd58351d 170 PRINTS PR01171 Bacterial lipocalin signature 130 141 2.2E-38 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CVS42_RS20920 571cf77a05d8cb80f80e37f8cd58351d 170 PRINTS PR01171 Bacterial lipocalin signature 98 112 2.2E-38 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CVS42_RS20920 571cf77a05d8cb80f80e37f8cd58351d 170 PRINTS PR01171 Bacterial lipocalin signature 46 62 2.2E-38 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CVS42_RS20920 571cf77a05d8cb80f80e37f8cd58351d 170 ProSitePatterns PS00213 Lipocalin signature. 28 41 - T 29-03-2018 IPR022272 Lipocalin family conserved site CVS42_RS17590 393d37bb67858b59a30fdb924a5bd25d 231 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS17590 393d37bb67858b59a30fdb924a5bd25d 231 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 7 213 6.4E-80 T 29-03-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 CVS42_RS17590 393d37bb67858b59a30fdb924a5bd25d 231 SMART SM00382 24 207 1.9E-19 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS17590 393d37bb67858b59a30fdb924a5bd25d 231 Pfam PF00005 ABC transporter 19 157 7.5E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS17590 393d37bb67858b59a30fdb924a5bd25d 231 Gene3D G3DSA:3.40.50.300 2 229 8.1E-59 T 29-03-2018 CVS42_RS17590 393d37bb67858b59a30fdb924a5bd25d 231 SUPERFAMILY SSF52540 1 221 1.25E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS04980 f85074d36c1064d8765c437043d8bd76 282 PIRSF PIRSF010376 2 278 2.1E-84 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CVS42_RS04980 f85074d36c1064d8765c437043d8bd76 282 SUPERFAMILY SSF55060 161 277 3.5E-34 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CVS42_RS04980 f85074d36c1064d8765c437043d8bd76 282 Gene3D G3DSA:3.30.230.10 4 160 3.8E-45 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CVS42_RS04980 f85074d36c1064d8765c437043d8bd76 282 Gene3D G3DSA:3.30.70.890 162 279 7.3E-23 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CVS42_RS04980 f85074d36c1064d8765c437043d8bd76 282 SUPERFAMILY SSF54211 4 158 3.57E-44 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS04980 f85074d36c1064d8765c437043d8bd76 282 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 279 9.9E-95 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CVS42_RS04980 f85074d36c1064d8765c437043d8bd76 282 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 4 271 32.78 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CVS42_RS04980 f85074d36c1064d8765c437043d8bd76 282 Pfam PF00288 GHMP kinases N terminal domain 87 144 2.3E-10 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CVS42_RS04980 f85074d36c1064d8765c437043d8bd76 282 Pfam PF08544 GHMP kinases C terminal 208 257 5.6E-5 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CVS42_RS08920 619a292f80caa26ccc3cef2c265760a9 548 ProSitePatterns PS00786 5'-nucleotidase signature 2. 92 103 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS08920 619a292f80caa26ccc3cef2c265760a9 548 SUPERFAMILY SSF55816 336 539 1.01E-38 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS08920 619a292f80caa26ccc3cef2c265760a9 548 Gene3D G3DSA:3.90.780.10 353 541 2.5E-38 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS08920 619a292f80caa26ccc3cef2c265760a9 548 Pfam PF00149 Calcineurin-like phosphoesterase 7 236 5.6E-9 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CVS42_RS08920 619a292f80caa26ccc3cef2c265760a9 548 Pfam PF02872 5'-nucleotidase, C-terminal domain 357 509 1.5E-25 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS08920 619a292f80caa26ccc3cef2c265760a9 548 SUPERFAMILY SSF56300 3 334 6.87E-69 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS08920 619a292f80caa26ccc3cef2c265760a9 548 Gene3D G3DSA:3.60.21.10 1 349 4.1E-65 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS08920 619a292f80caa26ccc3cef2c265760a9 548 PRINTS PR01607 Apyrase family signature 483 502 8.9E-12 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS08920 619a292f80caa26ccc3cef2c265760a9 548 PRINTS PR01607 Apyrase family signature 219 242 8.9E-12 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS08920 619a292f80caa26ccc3cef2c265760a9 548 PRINTS PR01607 Apyrase family signature 3 21 8.9E-12 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS08920 619a292f80caa26ccc3cef2c265760a9 548 PRINTS PR01607 Apyrase family signature 200 217 8.9E-12 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS08920 619a292f80caa26ccc3cef2c265760a9 548 PRINTS PR01607 Apyrase family signature 259 279 8.9E-12 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS17745 8c99d90fa6a6b4ca136b2e45ddb87420 66 Gene3D G3DSA:1.10.10.10 9 63 5.8E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS17745 8c99d90fa6a6b4ca136b2e45ddb87420 66 SUPERFAMILY SSF46955 8 58 1.41E-5 T 29-03-2018 IPR009061 Putative DNA-binding domain CVS42_RS17745 8c99d90fa6a6b4ca136b2e45ddb87420 66 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 11 57 2.8E-10 T 29-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CVS42_RS06320 042fa5bd6cfd8f21e2f5338e297cf14b 818 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 138 233 2.0E-15 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CVS42_RS06320 042fa5bd6cfd8f21e2f5338e297cf14b 818 SUPERFAMILY SSF56645 121 356 9.69E-43 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CVS42_RS06320 042fa5bd6cfd8f21e2f5338e297cf14b 818 Gene3D G3DSA:2.40.110.10 237 350 4.8E-15 T 29-03-2018 CVS42_RS06320 042fa5bd6cfd8f21e2f5338e297cf14b 818 Gene3D G3DSA:1.10.540.10 76 236 2.2E-29 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CVS42_RS06320 042fa5bd6cfd8f21e2f5338e297cf14b 818 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 1.5E-11 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CVS42_RS06320 042fa5bd6cfd8f21e2f5338e297cf14b 818 Pfam PF09317 Domain of unknown function (DUF1974) 515 797 3.0E-115 T 29-03-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 CVS42_RS06320 042fa5bd6cfd8f21e2f5338e297cf14b 818 Gene3D G3DSA:1.20.140.10 351 510 5.2E-18 T 29-03-2018 CVS42_RS06320 042fa5bd6cfd8f21e2f5338e297cf14b 818 SUPERFAMILY SSF47203 361 508 9.99E-22 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CVS42_RS14155 05b0b3552957009702fdbf4b50657222 402 Pfam PF00999 Sodium/hydrogen exchanger family 12 397 2.6E-40 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CVS42_RS00425 110f41da3b20066b6c12418f02866ce9 670 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 40.562 T 29-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CVS42_RS00425 110f41da3b20066b6c12418f02866ce9 670 Pfam PF13361 UvrD-like helicase C-terminal domain 271 614 2.2E-69 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CVS42_RS00425 110f41da3b20066b6c12418f02866ce9 670 Gene3D G3DSA:3.40.50.300 274 376 1.4E-22 T 29-03-2018 CVS42_RS00425 110f41da3b20066b6c12418f02866ce9 670 SUPERFAMILY SSF52540 1 640 5.99E-159 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00425 110f41da3b20066b6c12418f02866ce9 670 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 3.9E-76 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CVS42_RS00425 110f41da3b20066b6c12418f02866ce9 670 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 667 0.0 T 29-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CVS42_RS00425 110f41da3b20066b6c12418f02866ce9 670 Gene3D G3DSA:1.10.486.10 377 553 3.6E-39 T 29-03-2018 CVS42_RS00425 110f41da3b20066b6c12418f02866ce9 670 Gene3D G3DSA:3.40.50.300 1 271 6.9E-54 T 29-03-2018 CVS42_RS15550 c4705c67f745834477d179cc8669de90 229 Pfam PF00072 Response regulator receiver domain 5 116 5.1E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS15550 c4705c67f745834477d179cc8669de90 229 Gene3D G3DSA:1.10.10.10 124 228 6.6E-35 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS15550 c4705c67f745834477d179cc8669de90 229 SUPERFAMILY SSF46894 129 226 4.54E-32 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS15550 c4705c67f745834477d179cc8669de90 229 SMART SM00862 150 225 1.4E-27 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS15550 c4705c67f745834477d179cc8669de90 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 1.0E-28 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS15550 c4705c67f745834477d179cc8669de90 229 Gene3D G3DSA:3.40.50.2300 1 123 6.7E-39 T 29-03-2018 CVS42_RS15550 c4705c67f745834477d179cc8669de90 229 SUPERFAMILY SSF52172 3 125 1.42E-43 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS15550 c4705c67f745834477d179cc8669de90 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 1.0E-111 T 29-03-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 CVS42_RS15550 c4705c67f745834477d179cc8669de90 229 SMART SM00448 3 116 3.8E-47 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS00450 c7aa9d392f3369c987780325c7da2d6a 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 6.7E-13 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS00450 c7aa9d392f3369c987780325c7da2d6a 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.1E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS00450 c7aa9d392f3369c987780325c7da2d6a 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.1E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS00450 c7aa9d392f3369c987780325c7da2d6a 214 Pfam PF13972 Bacterial transcriptional repressor 56 195 6.2E-43 T 29-03-2018 IPR025722 Bacterial transcriptional repressor TetR CVS42_RS00450 c7aa9d392f3369c987780325c7da2d6a 214 SUPERFAMILY SSF46689 2 71 3.25E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS00450 c7aa9d392f3369c987780325c7da2d6a 214 Gene3D G3DSA:1.10.357.10 2 213 8.2E-30 T 29-03-2018 CVS42_RS10400 d04ce0bd7673fd860e5748a6c8ff4331 140 Gene3D G3DSA:3.10.580.10 1 130 2.9E-28 T 29-03-2018 CVS42_RS10400 d04ce0bd7673fd860e5748a6c8ff4331 140 Pfam PF00571 CBS domain 73 127 7.0E-10 T 29-03-2018 IPR000644 CBS domain CVS42_RS10400 d04ce0bd7673fd860e5748a6c8ff4331 140 Pfam PF00571 CBS domain 6 61 4.6E-7 T 29-03-2018 IPR000644 CBS domain CVS42_RS10400 d04ce0bd7673fd860e5748a6c8ff4331 140 SMART SM00116 80 127 2.1 T 29-03-2018 IPR000644 CBS domain CVS42_RS10400 d04ce0bd7673fd860e5748a6c8ff4331 140 SMART SM00116 13 61 1.0 T 29-03-2018 IPR000644 CBS domain CVS42_RS10400 d04ce0bd7673fd860e5748a6c8ff4331 140 SUPERFAMILY SSF54631 1 126 1.11E-29 T 29-03-2018 CVS42_RS14100 b4ffab78b5ffa37ecf960a0d11c9d4d5 447 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 447 9.6E-158 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CVS42_RS14100 b4ffab78b5ffa37ecf960a0d11c9d4d5 447 PIRSF PIRSF004539 1 447 2.1E-184 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CVS42_RS14100 b4ffab78b5ffa37ecf960a0d11c9d4d5 447 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 379 1.4E-148 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CVS42_RS21060 06cca00d402d12441a7a92df9f2c3c9e 371 SUPERFAMILY SSF102405 84 290 2.98E-39 T 29-03-2018 CVS42_RS21060 06cca00d402d12441a7a92df9f2c3c9e 371 Gene3D G3DSA:1.10.10.10 264 365 3.5E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS21060 06cca00d402d12441a7a92df9f2c3c9e 371 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 77 290 6.2E-77 T 29-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CVS42_RS21060 06cca00d402d12441a7a92df9f2c3c9e 371 Gene3D G3DSA:3.40.50.450 114 263 5.6E-35 T 29-03-2018 CVS42_RS21060 06cca00d402d12441a7a92df9f2c3c9e 371 Gene3D G3DSA:1.10.150.20 4 72 0.0014 T 29-03-2018 CVS42_RS21060 06cca00d402d12441a7a92df9f2c3c9e 371 Pfam PF02481 DNA recombination-mediator protein A 82 281 1.7E-74 T 29-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CVS42_RS04405 76f4153fdbf8b6820a9ce05a11aabaa0 332 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 27 310 3.1E-112 T 29-03-2018 IPR011757 Lytic transglycosylase MltB CVS42_RS04405 76f4153fdbf8b6820a9ce05a11aabaa0 332 Gene3D G3DSA:1.10.8.350 81 185 7.6E-36 T 29-03-2018 CVS42_RS04405 76f4153fdbf8b6820a9ce05a11aabaa0 332 Gene3D G3DSA:1.10.8.350 20 80 0.23 T 29-03-2018 CVS42_RS04405 76f4153fdbf8b6820a9ce05a11aabaa0 332 SUPERFAMILY SSF53955 26 312 5.44E-80 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS04405 76f4153fdbf8b6820a9ce05a11aabaa0 332 Gene3D G3DSA:1.10.530.10 191 316 7.4E-30 T 29-03-2018 CVS42_RS04405 76f4153fdbf8b6820a9ce05a11aabaa0 332 Pfam PF13406 Transglycosylase SLT domain 27 308 6.3E-96 T 29-03-2018 IPR031304 Transglycosylase SLT domain 2 CVS42_RS05735 f6da2dc2eeb9c156d1f6bf3c221d322b 396 SUPERFAMILY SSF53383 5 393 4.03E-85 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS05735 f6da2dc2eeb9c156d1f6bf3c221d322b 396 Gene3D G3DSA:3.40.640.10 112 276 1.0E-23 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS05735 f6da2dc2eeb9c156d1f6bf3c221d322b 396 Gene3D G3DSA:3.90.1150.10 277 395 3.1E-18 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS05735 f6da2dc2eeb9c156d1f6bf3c221d322b 396 Pfam PF00155 Aminotransferase class I and II 33 388 3.2E-42 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CVS42_RS05735 f6da2dc2eeb9c156d1f6bf3c221d322b 396 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 7 392 4.8E-109 T 29-03-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 CVS42_RS05735 f6da2dc2eeb9c156d1f6bf3c221d322b 396 Gene3D G3DSA:3.90.1150.10 1 111 1.7E-6 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS07790 684ae410976c4996a1cb38aa1eef9e95 336 SUPERFAMILY SSF54862 153 232 7.99E-18 T 29-03-2018 CVS42_RS07790 684ae410976c4996a1cb38aa1eef9e95 336 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 110 303 6.3E-20 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS07790 684ae410976c4996a1cb38aa1eef9e95 336 Gene3D G3DSA:3.90.480.10 13 84 5.3E-9 T 29-03-2018 CVS42_RS07790 684ae410976c4996a1cb38aa1eef9e95 336 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 23 82 2.4E-13 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS07790 684ae410976c4996a1cb38aa1eef9e95 336 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 212 223 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS07790 684ae410976c4996a1cb38aa1eef9e95 336 Gene3D G3DSA:3.30.413.10 108 317 2.9E-32 T 29-03-2018 CVS42_RS07790 684ae410976c4996a1cb38aa1eef9e95 336 SUPERFAMILY SSF56014 110 173 1.7E-32 T 29-03-2018 CVS42_RS07790 684ae410976c4996a1cb38aa1eef9e95 336 SUPERFAMILY SSF56014 232 328 1.7E-32 T 29-03-2018 CVS42_RS07790 684ae410976c4996a1cb38aa1eef9e95 336 SUPERFAMILY SSF55124 18 83 3.6E-16 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS07790 684ae410976c4996a1cb38aa1eef9e95 336 TIGRFAM TIGR02912 sulfite_red_C: sulfite reductase, subunit C 4 321 9.4E-144 T 29-03-2018 IPR014261 Sulphite reductase, subunit C CVS42_RS07790 684ae410976c4996a1cb38aa1eef9e95 336 Pfam PF14697 4Fe-4S dicluster domain 175 224 4.8E-10 T 29-03-2018 CVS42_RS07790 684ae410976c4996a1cb38aa1eef9e95 336 PRINTS PR00397 Sirohaem Fe-binding site signature 151 169 4.4E-7 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS07790 684ae410976c4996a1cb38aa1eef9e95 336 PRINTS PR00397 Sirohaem Fe-binding site signature 110 128 4.4E-7 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS07310 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS07310 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 Gene3D G3DSA:3.40.50.300 2 247 1.8E-68 T 29-03-2018 CVS42_RS07310 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 Pfam PF00005 ABC transporter 22 164 8.2E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS07310 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 Gene3D G3DSA:2.40.50.140 299 355 3.6E-13 T 29-03-2018 CVS42_RS07310 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 Pfam PF08402 TOBE domain 290 362 1.4E-9 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CVS42_RS07310 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 SUPERFAMILY SSF52540 5 250 4.29E-81 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS07310 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 SMART SM00382 31 214 6.1E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS07310 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 Gene3D G3DSA:2.40.50.100 248 298 3.6E-10 T 29-03-2018 CVS42_RS07310 e9fd53f3c36e1e6d943bcba1ccf48a5d 378 SUPERFAMILY SSF50331 245 369 3.19E-28 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CVS42_RS02175 c907170008ac5b4f26f26f63b5029a05 272 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 203 258 9.0E-14 T 29-03-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 CVS42_RS02175 c907170008ac5b4f26f26f63b5029a05 272 SUPERFAMILY SSF56300 14 266 1.32E-58 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS02175 c907170008ac5b4f26f26f63b5029a05 272 Pfam PF00149 Calcineurin-like phosphoesterase 14 203 2.3E-15 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CVS42_RS02175 c907170008ac5b4f26f26f63b5029a05 272 Gene3D G3DSA:3.60.21.10 2 265 2.1E-41 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS02175 c907170008ac5b4f26f26f63b5029a05 272 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 13 258 38.673 T 29-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 CVS42_RS07910 f049054e23e2d1b4279d1b24cd30ade8 963 Gene3D G3DSA:2.120.10.30 138 360 8.6E-7 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CVS42_RS07910 f049054e23e2d1b4279d1b24cd30ade8 963 Gene3D G3DSA:1.10.760.10 373 495 3.2E-6 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS07910 f049054e23e2d1b4279d1b24cd30ade8 963 Gene3D G3DSA:1.10.1130.10 520 707 1.0E-14 T 29-03-2018 CVS42_RS07910 f049054e23e2d1b4279d1b24cd30ade8 963 Gene3D G3DSA:3.90.10.10 708 794 0.12 T 29-03-2018 CVS42_RS07910 f049054e23e2d1b4279d1b24cd30ade8 963 SUPERFAMILY SSF51004 11 290 2.17E-24 T 29-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain CVS42_RS07910 f049054e23e2d1b4279d1b24cd30ade8 963 Gene3D G3DSA:2.130.10.10 7 137 1.2E-12 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CVS42_RS07910 f049054e23e2d1b4279d1b24cd30ade8 963 SUPERFAMILY SSF48695 521 734 4.09E-21 T 29-03-2018 IPR011031 Multihaem cytochrome CVS42_RS21775 29662cc94823d8405338ab4ee37d6545 693 SMART SM00836 589 692 0.0012 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CVS42_RS21775 29662cc94823d8405338ab4ee37d6545 693 Gene3D G3DSA:1.10.730.10 578 688 1.9E-11 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS21775 29662cc94823d8405338ab4ee37d6545 693 Pfam PF05746 DALR anticodon binding domain 586 683 4.1E-9 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CVS42_RS21775 29662cc94823d8405338ab4ee37d6545 693 SUPERFAMILY SSF109604 342 495 2.04E-11 T 29-03-2018 CVS42_RS21775 29662cc94823d8405338ab4ee37d6545 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 1.9E-34 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CVS42_RS21775 29662cc94823d8405338ab4ee37d6545 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 1.9E-34 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CVS42_RS21775 29662cc94823d8405338ab4ee37d6545 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 398 417 1.9E-34 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CVS42_RS21775 29662cc94823d8405338ab4ee37d6545 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 1.9E-34 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CVS42_RS21775 29662cc94823d8405338ab4ee37d6545 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 1.9E-34 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CVS42_RS21775 29662cc94823d8405338ab4ee37d6545 693 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 692 26.256 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CVS42_RS21775 29662cc94823d8405338ab4ee37d6545 693 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 693 1.5E-296 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CVS42_RS21775 29662cc94823d8405338ab4ee37d6545 693 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 555 1.1E-207 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CVS42_RS03070 5f9e26b114c89120410db284a12e1406 229 Gene3D G3DSA:3.40.50.300 1 215 5.8E-51 T 29-03-2018 CVS42_RS03070 5f9e26b114c89120410db284a12e1406 229 SMART SM00382 31 224 3.8E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS03070 5f9e26b114c89120410db284a12e1406 229 Pfam PF00005 ABC transporter 26 176 6.5E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS03070 5f9e26b114c89120410db284a12e1406 229 SUPERFAMILY SSF52540 27 211 3.85E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS01785 8ec707173a8d118a701924f724d7b269 162 Gene3D G3DSA:3.90.960.10 12 161 5.6E-24 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CVS42_RS01785 8ec707173a8d118a701924f724d7b269 162 Pfam PF04073 Aminoacyl-tRNA editing domain 32 144 4.2E-20 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CVS42_RS01785 8ec707173a8d118a701924f724d7b269 162 SUPERFAMILY SSF55826 17 157 1.57E-27 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CVS42_RS20745 b874d491383e2aa1632945f0672bb96a 376 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 8 176 1.5E-66 T 29-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal CVS42_RS20745 b874d491383e2aa1632945f0672bb96a 376 Gene3D G3DSA:1.10.468.10 33 195 1.1E-25 T 29-03-2018 CVS42_RS20745 b874d491383e2aa1632945f0672bb96a 376 PIRSF PIRSF000014 3 376 4.3E-138 T 29-03-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 CVS42_RS20745 b874d491383e2aa1632945f0672bb96a 376 SUPERFAMILY SSF46626 317 368 3.15E-5 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS20745 b874d491383e2aa1632945f0672bb96a 376 SUPERFAMILY SSF48695 9 178 8.5E-48 T 29-03-2018 IPR011031 Multihaem cytochrome CVS42_RS04275 f1b7c8af79b27adbad7fbfbb0f562321 306 SUPERFAMILY SSF56601 7 306 3.38E-109 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CVS42_RS04275 f1b7c8af79b27adbad7fbfbb0f562321 306 Pfam PF04960 Glutaminase 22 306 2.9E-109 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CVS42_RS04275 f1b7c8af79b27adbad7fbfbb0f562321 306 Gene3D G3DSA:3.40.710.10 3 306 1.1E-118 T 29-03-2018 CVS42_RS04275 f1b7c8af79b27adbad7fbfbb0f562321 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 46.648 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CVS42_RS04275 f1b7c8af79b27adbad7fbfbb0f562321 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 2.0E-126 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 Gene3D G3DSA:2.10.10.20 818 861 3.1E-12 T 29-03-2018 CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 Gene3D G3DSA:2.60.40.10 24 129 1.0E-20 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 SUPERFAMILY SSF51055 818 860 6.15E-12 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 Gene3D G3DSA:3.40.1850.10 683 761 8.8E-12 T 29-03-2018 CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 ProSitePatterns PS01095 Chitinases family 18 active site. 306 314 - T 29-03-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 SUPERFAMILY SSF81296 24 131 1.96E-36 T 29-03-2018 IPR014756 Immunoglobulin E-set CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 Gene3D G3DSA:2.60.40.10 569 649 1.1E-14 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 SMART SM00636 157 543 7.1E-162 T 29-03-2018 IPR011583 Chitinase II GO:0008061 CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 Gene3D G3DSA:2.10.10.20 762 814 4.7E-13 T 29-03-2018 CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 Gene3D G3DSA:3.20.20.80 131 568 5.2E-92 T 29-03-2018 CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 SUPERFAMILY SSF51445 133 443 2.0E-104 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 SUPERFAMILY SSF51445 516 557 2.0E-104 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 Pfam PF08329 Chitinase A, N-terminal domain 23 154 2.1E-60 T 29-03-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 Gene3D G3DSA:2.40.50.70 650 682 2.4E-5 T 29-03-2018 CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 Pfam PF00704 Glycosyl hydrolases family 18 159 543 2.6E-90 T 29-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 SUPERFAMILY SSF51055 765 814 4.05E-12 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 SMART SM00089 61 132 1.2E-4 T 29-03-2018 IPR022409 PKD/Chitinase domain CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 SMART SM00089 667 753 0.0016 T 29-03-2018 IPR022409 PKD/Chitinase domain CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 SMART SM00495 816 858 5.4E-11 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 SMART SM00495 769 812 1.9E-12 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04165 71810441b097ed8520b20341a845ee0a 864 SUPERFAMILY SSF54556 443 515 1.01E-19 T 29-03-2018 IPR029070 Chitinase insertion domain CVS42_RS04790 50479169bd8197753b5906d1c061e3eb 290 Gene3D G3DSA:1.10.1020.10 57 150 4.8E-34 T 29-03-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 CVS42_RS04790 50479169bd8197753b5906d1c061e3eb 290 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 9.7E-18 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CVS42_RS04790 50479169bd8197753b5906d1c061e3eb 290 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 9.7E-18 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CVS42_RS04790 50479169bd8197753b5906d1c061e3eb 290 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 9.7E-18 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CVS42_RS04790 50479169bd8197753b5906d1c061e3eb 290 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 9.7E-18 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CVS42_RS04790 50479169bd8197753b5906d1c061e3eb 290 SUPERFAMILY SSF53335 5 268 9.08E-77 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS04790 50479169bd8197753b5906d1c061e3eb 290 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 1.4E-93 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CVS42_RS04790 50479169bd8197753b5906d1c061e3eb 290 PIRSF PIRSF000398 1 272 1.7E-66 T 29-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 CVS42_RS04790 50479169bd8197753b5906d1c061e3eb 290 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CVS42_RS04790 50479169bd8197753b5906d1c061e3eb 290 Gene3D G3DSA:3.40.50.150 151 269 3.7E-15 T 29-03-2018 CVS42_RS04790 50479169bd8197753b5906d1c061e3eb 290 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 244 4.5E-67 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CVS42_RS05675 fb8999ee2a843ac715201b2f0de459b9 368 Gene3D G3DSA:3.40.50.620 1 213 7.1E-67 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS05675 fb8999ee2a843ac715201b2f0de459b9 368 SUPERFAMILY SSF52402 8 245 3.31E-55 T 29-03-2018 CVS42_RS05675 fb8999ee2a843ac715201b2f0de459b9 368 Gene3D G3DSA:2.30.30.280 214 280 3.2E-25 T 29-03-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 CVS42_RS05675 fb8999ee2a843ac715201b2f0de459b9 368 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 361 40.479 T 29-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CVS42_RS05675 fb8999ee2a843ac715201b2f0de459b9 368 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 8 360 1.6E-155 T 29-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CVS42_RS05675 fb8999ee2a843ac715201b2f0de459b9 368 Pfam PF03054 tRNA methyl transferase 8 360 7.4E-142 T 29-03-2018 CVS42_RS05675 fb8999ee2a843ac715201b2f0de459b9 368 Gene3D G3DSA:2.40.30.10 282 367 9.2E-30 T 29-03-2018 CVS42_RS09275 2491f01efb81020b95878cf7a6f0987c 473 SUPERFAMILY SSF51338 353 458 3.64E-36 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS09275 2491f01efb81020b95878cf7a6f0987c 473 Gene3D G3DSA:2.30.40.10 1 68 3.0E-18 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS09275 2491f01efb81020b95878cf7a6f0987c 473 Pfam PF01979 Amidohydrolase family 50 436 2.8E-23 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CVS42_RS09275 2491f01efb81020b95878cf7a6f0987c 473 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 4 454 5.5E-177 T 29-03-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 CVS42_RS09275 2491f01efb81020b95878cf7a6f0987c 473 Gene3D G3DSA:3.20.20.140 280 423 2.9E-39 T 29-03-2018 CVS42_RS09275 2491f01efb81020b95878cf7a6f0987c 473 Gene3D G3DSA:3.20.20.140 69 279 2.6E-50 T 29-03-2018 CVS42_RS09275 2491f01efb81020b95878cf7a6f0987c 473 SUPERFAMILY SSF51556 54 382 3.27E-94 T 29-03-2018 IPR032466 Metal-dependent hydrolase CVS42_RS09275 2491f01efb81020b95878cf7a6f0987c 473 SUPERFAMILY SSF51338 1 64 1.9E-15 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS19050 3eb3af93720d7db5572960a1a7b6e6a5 235 Gene3D G3DSA:2.30.330.10 158 235 2.9E-15 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CVS42_RS19050 3eb3af93720d7db5572960a1a7b6e6a5 235 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 165 233 6.0E-13 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CVS42_RS19050 3eb3af93720d7db5572960a1a7b6e6a5 235 SUPERFAMILY SSF101801 162 234 3.14E-11 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CVS42_RS13015 bb2a2b056beaf48eb1f9131ed72afe9f 391 SUPERFAMILY SSF54373 263 332 2.55E-21 T 29-03-2018 CVS42_RS13015 bb2a2b056beaf48eb1f9131ed72afe9f 391 Pfam PF03275 UDP-galactopyranose mutase 154 365 5.9E-63 T 29-03-2018 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 CVS42_RS13015 bb2a2b056beaf48eb1f9131ed72afe9f 391 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 75 2.9E-16 T 29-03-2018 CVS42_RS13015 bb2a2b056beaf48eb1f9131ed72afe9f 391 Gene3D G3DSA:3.40.50.720 311 389 1.1E-6 T 29-03-2018 CVS42_RS13015 bb2a2b056beaf48eb1f9131ed72afe9f 391 Gene3D G3DSA:3.40.50.720 1 310 1.5E-34 T 29-03-2018 CVS42_RS13015 bb2a2b056beaf48eb1f9131ed72afe9f 391 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 3 382 5.9E-127 T 29-03-2018 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 CVS42_RS13015 bb2a2b056beaf48eb1f9131ed72afe9f 391 SUPERFAMILY SSF51971 1 281 1.29E-42 T 29-03-2018 CVS42_RS13015 bb2a2b056beaf48eb1f9131ed72afe9f 391 SUPERFAMILY SSF51971 350 382 1.29E-42 T 29-03-2018 CVS42_RS19330 5401e4ed129f110d75d5a5c5f9d48d80 104 Pfam PF01491 Frataxin-like domain 1 101 8.7E-26 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CVS42_RS19330 5401e4ed129f110d75d5a5c5f9d48d80 104 Gene3D G3DSA:3.30.920.10 1 104 4.4E-29 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CVS42_RS19330 5401e4ed129f110d75d5a5c5f9d48d80 104 Hamap MF_00142 Protein CyaY [cyaY]. 1 103 27.082 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CVS42_RS19330 5401e4ed129f110d75d5a5c5f9d48d80 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 29-03-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CVS42_RS19330 5401e4ed129f110d75d5a5c5f9d48d80 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 3 103 2.5E-40 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CVS42_RS19330 5401e4ed129f110d75d5a5c5f9d48d80 104 SMART SM01219 1 104 1.4E-49 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CVS42_RS19330 5401e4ed129f110d75d5a5c5f9d48d80 104 SUPERFAMILY SSF55387 1 103 6.98E-34 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 SUPERFAMILY SSF82693 40 130 2.44E-22 T 29-03-2018 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 SUPERFAMILY SSF82866 783 1005 2.22E-45 T 29-03-2018 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 9.3E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 9.3E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 9.3E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.3E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 9.3E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 9.3E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.3E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 9.3E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 9.3E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 SUPERFAMILY SSF82693 136 181 5.36E-21 T 29-03-2018 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 SUPERFAMILY SSF82693 267 323 5.36E-21 T 29-03-2018 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 SUPERFAMILY SSF82714 701 783 4.19E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 Gene3D G3DSA:3.30.70.1430 555 650 6.4E-12 T 29-03-2018 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 Pfam PF00873 AcrB/AcrD/AcrF family 4 1004 2.3E-271 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 Gene3D G3DSA:1.20.1640.10 790 1007 2.5E-39 T 29-03-2018 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 Gene3D G3DSA:1.20.1640.10 266 491 4.2E-43 T 29-03-2018 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 SUPERFAMILY SSF82866 290 489 5.89E-46 T 29-03-2018 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 SUPERFAMILY SSF82714 183 263 5.75E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 SUPERFAMILY SSF82693 553 650 4.03E-17 T 29-03-2018 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 Gene3D G3DSA:3.30.2090.10 181 265 4.3E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 Gene3D G3DSA:3.30.70.1430 40 141 6.0E-25 T 29-03-2018 CVS42_RS00160 8a095ced70528f2326e0c59c0c8cae73 1026 Gene3D G3DSA:3.30.2090.10 698 784 7.5E-14 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS00595 f3bd54ebd8c83bfef67b630281a536d1 663 Gene3D G3DSA:3.60.21.10 20 393 1.6E-76 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS00595 f3bd54ebd8c83bfef67b630281a536d1 663 Gene3D G3DSA:3.90.780.10 394 621 8.6E-49 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS00595 f3bd54ebd8c83bfef67b630281a536d1 663 Pfam PF02872 5'-nucleotidase, C-terminal domain 376 567 7.4E-23 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS00595 f3bd54ebd8c83bfef67b630281a536d1 663 ProSitePatterns PS00786 5'-nucleotidase signature 2. 121 132 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS00595 f3bd54ebd8c83bfef67b630281a536d1 663 PRINTS PR01607 Apyrase family signature 305 325 8.8E-26 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS00595 f3bd54ebd8c83bfef67b630281a536d1 663 PRINTS PR01607 Apyrase family signature 444 467 8.8E-26 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS00595 f3bd54ebd8c83bfef67b630281a536d1 663 PRINTS PR01607 Apyrase family signature 266 289 8.8E-26 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS00595 f3bd54ebd8c83bfef67b630281a536d1 663 PRINTS PR01607 Apyrase family signature 30 48 8.8E-26 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS00595 f3bd54ebd8c83bfef67b630281a536d1 663 PRINTS PR01607 Apyrase family signature 544 563 8.8E-26 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS00595 f3bd54ebd8c83bfef67b630281a536d1 663 PRINTS PR01607 Apyrase family signature 238 255 8.8E-26 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS00595 f3bd54ebd8c83bfef67b630281a536d1 663 SUPERFAMILY SSF56300 26 372 2.07E-76 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS00595 f3bd54ebd8c83bfef67b630281a536d1 663 Pfam PF00149 Calcineurin-like phosphoesterase 33 283 9.1E-10 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CVS42_RS00595 f3bd54ebd8c83bfef67b630281a536d1 663 ProSitePatterns PS00785 5'-nucleotidase signature 1. 32 44 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS00595 f3bd54ebd8c83bfef67b630281a536d1 663 SUPERFAMILY SSF55816 374 609 1.96E-37 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS10405 ce4d8cdc8f9b47bbf81f9b4e17bc358a 425 TIGRFAM TIGR00277 HDIG: HDIG domain 245 335 5.4E-8 T 29-03-2018 IPR006675 HDIG domain CVS42_RS10405 ce4d8cdc8f9b47bbf81f9b4e17bc358a 425 Gene3D G3DSA:1.10.3210.10 210 416 4.9E-45 T 29-03-2018 CVS42_RS10405 ce4d8cdc8f9b47bbf81f9b4e17bc358a 425 Gene3D G3DSA:1.10.3210.10 20 198 3.2E-17 T 29-03-2018 CVS42_RS10405 ce4d8cdc8f9b47bbf81f9b4e17bc358a 425 SMART SM00471 30 160 16.0 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS10405 ce4d8cdc8f9b47bbf81f9b4e17bc358a 425 SMART SM00471 241 376 3.1E-12 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS10405 ce4d8cdc8f9b47bbf81f9b4e17bc358a 425 SUPERFAMILY SSF109604 19 190 1.26E-18 T 29-03-2018 CVS42_RS10405 ce4d8cdc8f9b47bbf81f9b4e17bc358a 425 Pfam PF01966 HD domain 37 152 6.5E-6 T 29-03-2018 IPR006674 HD domain CVS42_RS10405 ce4d8cdc8f9b47bbf81f9b4e17bc358a 425 Pfam PF01966 HD domain 246 367 2.9E-20 T 29-03-2018 IPR006674 HD domain CVS42_RS10405 ce4d8cdc8f9b47bbf81f9b4e17bc358a 425 SUPERFAMILY SSF109604 238 408 1.28E-33 T 29-03-2018 CVS42_RS04385 881a109ea078ae41f314a172800c9fe0 225 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 80 133 1.0E-16 T 29-03-2018 CVS42_RS04385 881a109ea078ae41f314a172800c9fe0 225 Pfam PF03099 Biotin/lipoate A/B protein ligase family 64 169 2.5E-7 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CVS42_RS04385 881a109ea078ae41f314a172800c9fe0 225 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 32 212 8.7E-64 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CVS42_RS04385 881a109ea078ae41f314a172800c9fe0 225 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 76 91 - T 29-03-2018 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CVS42_RS04385 881a109ea078ae41f314a172800c9fe0 225 PIRSF PIRSF016262 7 225 1.3E-59 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CVS42_RS04385 881a109ea078ae41f314a172800c9fe0 225 Gene3D G3DSA:3.30.930.10 4 214 3.0E-59 T 29-03-2018 CVS42_RS04385 881a109ea078ae41f314a172800c9fe0 225 Hamap MF_00013 Octanoyltransferase [lipB]. 10 216 37.086 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CVS42_RS04385 881a109ea078ae41f314a172800c9fe0 225 SUPERFAMILY SSF55681 9 216 3.65E-68 T 29-03-2018 CVS42_RS17125 92e882831a5f6391a9df18b09071a068 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 4 262 36.696 T 29-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CVS42_RS17125 92e882831a5f6391a9df18b09071a068 367 PIRSF PIRSF000729 1 367 2.8E-137 T 29-03-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CVS42_RS17125 92e882831a5f6391a9df18b09071a068 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 4 366 3.3E-146 T 29-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CVS42_RS17125 92e882831a5f6391a9df18b09071a068 367 Gene3D G3DSA:2.30.130.10 274 366 2.7E-30 T 29-03-2018 IPR002478 PUA domain GO:0003723 CVS42_RS17125 92e882831a5f6391a9df18b09071a068 367 SMART SM00359 276 359 2.4E-18 T 29-03-2018 IPR002478 PUA domain GO:0003723 CVS42_RS17125 92e882831a5f6391a9df18b09071a068 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 206 223 - T 29-03-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CVS42_RS17125 92e882831a5f6391a9df18b09071a068 367 Pfam PF01472 PUA domain 276 350 1.0E-21 T 29-03-2018 IPR002478 PUA domain GO:0003723 CVS42_RS17125 92e882831a5f6391a9df18b09071a068 367 SUPERFAMILY SSF88697 275 366 7.73E-24 T 29-03-2018 IPR015947 PUA-like domain CVS42_RS17125 92e882831a5f6391a9df18b09071a068 367 PRINTS PR00474 Glutamate 5-kinase family signature 75 103 7.4E-54 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CVS42_RS17125 92e882831a5f6391a9df18b09071a068 367 PRINTS PR00474 Glutamate 5-kinase family signature 115 136 7.4E-54 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CVS42_RS17125 92e882831a5f6391a9df18b09071a068 367 PRINTS PR00474 Glutamate 5-kinase family signature 147 174 7.4E-54 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CVS42_RS17125 92e882831a5f6391a9df18b09071a068 367 PRINTS PR00474 Glutamate 5-kinase family signature 41 55 7.4E-54 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CVS42_RS17125 92e882831a5f6391a9df18b09071a068 367 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 7.4E-54 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CVS42_RS17125 92e882831a5f6391a9df18b09071a068 367 Pfam PF00696 Amino acid kinase family 5 233 9.1E-43 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS17125 92e882831a5f6391a9df18b09071a068 367 SUPERFAMILY SSF53633 4 254 6.68E-69 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS17125 92e882831a5f6391a9df18b09071a068 367 Gene3D G3DSA:3.40.1160.10 1 260 1.8E-62 T 29-03-2018 CVS42_RS00930 8b86755095a658d5d3578a161e80c869 302 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 163 295 4.4E-37 T 29-03-2018 IPR012660 Thioesterase, putative CVS42_RS00930 8b86755095a658d5d3578a161e80c869 302 SUPERFAMILY SSF54637 153 294 1.44E-32 T 29-03-2018 IPR029069 HotDog domain CVS42_RS00930 8b86755095a658d5d3578a161e80c869 302 Gene3D G3DSA:3.40.630.30 1 146 5.3E-25 T 29-03-2018 CVS42_RS00930 8b86755095a658d5d3578a161e80c869 302 SUPERFAMILY SSF55729 2 146 2.66E-30 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS00930 8b86755095a658d5d3578a161e80c869 302 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 156 295 7.3E-45 T 29-03-2018 IPR012660 Thioesterase, putative CVS42_RS00930 8b86755095a658d5d3578a161e80c869 302 Pfam PF00583 Acetyltransferase (GNAT) family 33 121 4.7E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS00930 8b86755095a658d5d3578a161e80c869 302 Gene3D G3DSA:3.10.129.10 147 299 1.6E-14 T 29-03-2018 CVS42_RS19860 c2f1df06e4202a3e2d1985597c12f90a 266 Gene3D G3DSA:3.40.630.30 118 258 3.7E-17 T 29-03-2018 CVS42_RS19860 c2f1df06e4202a3e2d1985597c12f90a 266 Pfam PF13673 Acetyltransferase (GNAT) domain 159 254 3.1E-7 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS19860 c2f1df06e4202a3e2d1985597c12f90a 266 SUPERFAMILY SSF55729 37 255 3.49E-18 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS03245 8f893551ead7656e8edeaa6daac0ac44 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 4.2E-59 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS03245 8f893551ead7656e8edeaa6daac0ac44 337 Gene3D G3DSA:3.90.25.10 254 336 6.7E-25 T 29-03-2018 CVS42_RS03245 8f893551ead7656e8edeaa6daac0ac44 337 Gene3D G3DSA:3.90.25.10 207 253 2.0E-7 T 29-03-2018 CVS42_RS03245 8f893551ead7656e8edeaa6daac0ac44 337 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 334 1.8E-141 T 29-03-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-70370 CVS42_RS03245 8f893551ead7656e8edeaa6daac0ac44 337 Gene3D G3DSA:3.40.50.720 1 206 1.4E-39 T 29-03-2018 CVS42_RS03245 8f893551ead7656e8edeaa6daac0ac44 337 SUPERFAMILY SSF51735 1 336 1.22E-96 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS11380 22091bdd9eac378df6b5b26f1daf943c 636 Gene3D G3DSA:1.10.4030.10 35 172 7.4E-26 T 29-03-2018 CVS42_RS11380 22091bdd9eac378df6b5b26f1daf943c 636 Gene3D G3DSA:3.10.50.40 260 392 1.1E-38 T 29-03-2018 CVS42_RS11380 22091bdd9eac378df6b5b26f1daf943c 636 Gene3D G3DSA:3.10.50.40 405 503 7.2E-6 T 29-03-2018 CVS42_RS11380 22091bdd9eac378df6b5b26f1daf943c 636 SUPERFAMILY SSF109998 203 247 3.53E-37 T 29-03-2018 IPR027304 Trigger factor/SurA domain CVS42_RS11380 22091bdd9eac378df6b5b26f1daf943c 636 SUPERFAMILY SSF109998 43 169 3.53E-37 T 29-03-2018 IPR027304 Trigger factor/SurA domain CVS42_RS11380 22091bdd9eac378df6b5b26f1daf943c 636 Pfam PF13616 PPIC-type PPIASE domain 267 365 1.7E-27 T 29-03-2018 CVS42_RS11380 22091bdd9eac378df6b5b26f1daf943c 636 Pfam PF13624 SurA N-terminal domain 1 166 2.8E-51 T 29-03-2018 CVS42_RS11380 22091bdd9eac378df6b5b26f1daf943c 636 SUPERFAMILY SSF54534 261 365 1.18E-28 T 29-03-2018 CVS42_RS02480 874afb753619c7c82e7b76c158e32a72 512 Pfam PF00158 Sigma-54 interaction domain 198 361 8.6E-66 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CVS42_RS02480 874afb753619c7c82e7b76c158e32a72 512 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 284 299 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CVS42_RS02480 874afb753619c7c82e7b76c158e32a72 512 Gene3D G3DSA:1.10.8.60 371 468 6.5E-18 T 29-03-2018 CVS42_RS02480 874afb753619c7c82e7b76c158e32a72 512 SMART SM00382 218 361 1.1E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS02480 874afb753619c7c82e7b76c158e32a72 512 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 411 420 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CVS42_RS02480 874afb753619c7c82e7b76c158e32a72 512 Gene3D G3DSA:3.40.50.300 194 370 5.6E-26 T 29-03-2018 CVS42_RS02480 874afb753619c7c82e7b76c158e32a72 512 SUPERFAMILY SSF52540 198 441 1.0E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS02480 874afb753619c7c82e7b76c158e32a72 512 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 222 235 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CVS42_RS02480 874afb753619c7c82e7b76c158e32a72 512 SUPERFAMILY SSF46689 412 511 4.48E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS02480 874afb753619c7c82e7b76c158e32a72 512 Gene3D G3DSA:1.10.10.60 469 512 2.7E-8 T 29-03-2018 CVS42_RS13935 6e6cf558862e2d06580164117573f7c7 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 17 227 7.1E-19 T 29-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 CVS42_RS13935 6e6cf558862e2d06580164117573f7c7 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 29-03-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CVS42_RS13935 6e6cf558862e2d06580164117573f7c7 266 Gene3D G3DSA:3.40.50.1360 1 265 4.0E-84 T 29-03-2018 CVS42_RS13935 6e6cf558862e2d06580164117573f7c7 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 7.5E-138 T 29-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CVS42_RS13935 6e6cf558862e2d06580164117573f7c7 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.579 T 29-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CVS42_RS13935 6e6cf558862e2d06580164117573f7c7 266 SUPERFAMILY SSF100950 1 263 4.34E-105 T 29-03-2018 CVS42_RS18940 d2f4fc68cdb834cc8d91fdb5f1531c9b 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 1.1E-25 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CVS42_RS18940 d2f4fc68cdb834cc8d91fdb5f1531c9b 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CVS42_RS18940 d2f4fc68cdb834cc8d91fdb5f1531c9b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 3.9E-43 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CVS42_RS18940 d2f4fc68cdb834cc8d91fdb5f1531c9b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 3.6E-34 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CVS42_RS18940 d2f4fc68cdb834cc8d91fdb5f1531c9b 261 SUPERFAMILY SSF117143 93 222 5.23E-36 T 29-03-2018 CVS42_RS18940 d2f4fc68cdb834cc8d91fdb5f1531c9b 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 3.0E-112 T 29-03-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 CVS42_RS18940 d2f4fc68cdb834cc8d91fdb5f1531c9b 261 Pfam PF00460 Flagella basal body rod protein 5 35 2.1E-9 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CVS42_RS03795 eb793c41fd3ef4685d8888bd60247d5f 299 TIGRFAM TIGR00436 era: GTP-binding protein Era 8 279 2.6E-114 T 29-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS03795 eb793c41fd3ef4685d8888bd60247d5f 299 Gene3D G3DSA:3.40.50.300 9 43 6.5E-11 T 29-03-2018 CVS42_RS03795 eb793c41fd3ef4685d8888bd60247d5f 299 Gene3D G3DSA:3.40.50.300 44 193 3.2E-20 T 29-03-2018 CVS42_RS03795 eb793c41fd3ef4685d8888bd60247d5f 299 SUPERFAMILY SSF54814 181 296 4.25E-44 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CVS42_RS03795 eb793c41fd3ef4685d8888bd60247d5f 299 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 166 1.8E-36 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CVS42_RS03795 eb793c41fd3ef4685d8888bd60247d5f 299 Pfam PF01926 50S ribosome-binding GTPase 10 124 1.2E-23 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS03795 eb793c41fd3ef4685d8888bd60247d5f 299 Hamap MF_00367 GTPase Era [era]. 5 296 36.039 T 29-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS03795 eb793c41fd3ef4685d8888bd60247d5f 299 SUPERFAMILY SSF52540 10 205 2.8E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS03795 eb793c41fd3ef4685d8888bd60247d5f 299 Gene3D G3DSA:3.30.300.20 194 299 4.8E-44 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CVS42_RS03795 eb793c41fd3ef4685d8888bd60247d5f 299 Pfam PF07650 KH domain 208 284 9.7E-20 T 29-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS02975 a67eba38623e2749fa2c0b02879555a9 729 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 140 719 3.7E-184 T 29-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CVS42_RS02975 a67eba38623e2749fa2c0b02879555a9 729 Pfam PF02446 4-alpha-glucanotransferase 185 701 1.1E-125 T 29-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CVS42_RS02975 a67eba38623e2749fa2c0b02879555a9 729 Gene3D G3DSA:3.20.20.80 175 722 5.6E-154 T 29-03-2018 CVS42_RS02975 a67eba38623e2749fa2c0b02879555a9 729 SUPERFAMILY SSF51445 636 720 2.74E-145 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS02975 a67eba38623e2749fa2c0b02879555a9 729 SUPERFAMILY SSF51445 169 597 2.74E-145 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS18340 039553a4baef9fc17a0e9d9b053a2f3e 369 SUPERFAMILY SSF52540 3 337 2.0E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS18340 039553a4baef9fc17a0e9d9b053a2f3e 369 Pfam PF00437 Type II/IV secretion system protein 114 269 1.7E-36 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CVS42_RS18340 039553a4baef9fc17a0e9d9b053a2f3e 369 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 344 3.1E-124 T 29-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 CVS42_RS18340 039553a4baef9fc17a0e9d9b053a2f3e 369 Gene3D G3DSA:3.40.50.300 274 347 2.3E-12 T 29-03-2018 CVS42_RS18340 039553a4baef9fc17a0e9d9b053a2f3e 369 Gene3D G3DSA:3.40.50.300 116 273 1.6E-27 T 29-03-2018 CVS42_RS18340 039553a4baef9fc17a0e9d9b053a2f3e 369 Gene3D G3DSA:3.30.450.90 1 99 4.5E-14 T 29-03-2018 CVS42_RS04365 44946d03cb459b1acf9da25ca2d634bf 477 Gene3D G3DSA:3.40.50.720 126 295 4.4E-48 T 29-03-2018 CVS42_RS04365 44946d03cb459b1acf9da25ca2d634bf 477 SMART SM00846 127 288 3.2E-53 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS04365 44946d03cb459b1acf9da25ca2d634bf 477 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 4.3E-46 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS04365 44946d03cb459b1acf9da25ca2d634bf 477 Gene3D G3DSA:3.30.360.10 296 452 6.5E-50 T 29-03-2018 CVS42_RS04365 44946d03cb459b1acf9da25ca2d634bf 477 SUPERFAMILY SSF51735 127 314 7.12E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS04365 44946d03cb459b1acf9da25ca2d634bf 477 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 1.3E-20 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS04365 44946d03cb459b1acf9da25ca2d634bf 477 SUPERFAMILY SSF55347 288 451 4.99E-53 T 29-03-2018 CVS42_RS04365 44946d03cb459b1acf9da25ca2d634bf 477 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 29-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS04365 44946d03cb459b1acf9da25ca2d634bf 477 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 2.9E-113 T 29-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS04365 44946d03cb459b1acf9da25ca2d634bf 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 5.3E-18 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS04365 44946d03cb459b1acf9da25ca2d634bf 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 5.3E-18 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS04365 44946d03cb459b1acf9da25ca2d634bf 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 5.3E-18 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS04365 44946d03cb459b1acf9da25ca2d634bf 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 5.3E-18 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS13525 30e5aecab8ec2fec3ba338a0d4a9d9ff 472 SUPERFAMILY SSF46689 416 468 5.82E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS13525 30e5aecab8ec2fec3ba338a0d4a9d9ff 472 SUPERFAMILY SSF46689 340 383 5.82E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS13525 30e5aecab8ec2fec3ba338a0d4a9d9ff 472 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 4.9E-11 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS13525 30e5aecab8ec2fec3ba338a0d4a9d9ff 472 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 4.9E-11 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS13525 30e5aecab8ec2fec3ba338a0d4a9d9ff 472 Gene3D G3DSA:1.10.8.60 301 368 4.9E-21 T 29-03-2018 CVS42_RS13525 30e5aecab8ec2fec3ba338a0d4a9d9ff 472 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 340 349 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CVS42_RS13525 30e5aecab8ec2fec3ba338a0d4a9d9ff 472 Pfam PF06490 Flagellar regulatory protein FleQ 5 107 3.3E-16 T 29-03-2018 IPR010518 Flagellar regulatory FleQ CVS42_RS13525 30e5aecab8ec2fec3ba338a0d4a9d9ff 472 SUPERFAMILY SSF52540 128 369 5.63E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS13525 30e5aecab8ec2fec3ba338a0d4a9d9ff 472 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 5.3E-15 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS13525 30e5aecab8ec2fec3ba338a0d4a9d9ff 472 SUPERFAMILY SSF52172 3 170 8.2E-6 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS13525 30e5aecab8ec2fec3ba338a0d4a9d9ff 472 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 152 165 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CVS42_RS13525 30e5aecab8ec2fec3ba338a0d4a9d9ff 472 SMART SM00382 148 292 2.0E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS13525 30e5aecab8ec2fec3ba338a0d4a9d9ff 472 Gene3D G3DSA:1.10.10.60 369 472 3.1E-17 T 29-03-2018 CVS42_RS13525 30e5aecab8ec2fec3ba338a0d4a9d9ff 472 Pfam PF00158 Sigma-54 interaction domain 128 295 2.6E-72 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CVS42_RS13525 30e5aecab8ec2fec3ba338a0d4a9d9ff 472 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 214 229 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CVS42_RS13525 30e5aecab8ec2fec3ba338a0d4a9d9ff 472 Gene3D G3DSA:3.40.50.300 126 300 4.2E-30 T 29-03-2018 CVS42_RS05420 99a1ff222b4592222e5f528beb32aec7 166 SUPERFAMILY SSF55961 5 143 1.44E-20 T 29-03-2018 CVS42_RS05420 99a1ff222b4592222e5f528beb32aec7 166 Gene3D G3DSA:3.30.530.20 1 148 2.5E-17 T 29-03-2018 IPR023393 START-like domain CVS42_RS05420 99a1ff222b4592222e5f528beb32aec7 166 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 134 1.6E-12 T 29-03-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 CVS42_RS02765 97bf6f11349f0b88112a0310e59926d2 546 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 378 542 4.2E-43 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS02765 97bf6f11349f0b88112a0310e59926d2 546 Pfam PF00990 Diguanylate cyclase, GGDEF domain 382 540 7.7E-45 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS02765 97bf6f11349f0b88112a0310e59926d2 546 SUPERFAMILY SSF55073 385 544 2.51E-42 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS02765 97bf6f11349f0b88112a0310e59926d2 546 SMART SM00065 199 345 0.0091 T 29-03-2018 IPR003018 GAF domain GO:0005515 CVS42_RS02765 97bf6f11349f0b88112a0310e59926d2 546 SMART SM00065 11 157 0.0037 T 29-03-2018 IPR003018 GAF domain GO:0005515 CVS42_RS02765 97bf6f11349f0b88112a0310e59926d2 546 Gene3D G3DSA:3.30.70.270 378 546 1.3E-46 T 29-03-2018 CVS42_RS02765 97bf6f11349f0b88112a0310e59926d2 546 SMART SM00267 369 545 3.2E-61 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS02765 97bf6f11349f0b88112a0310e59926d2 546 SUPERFAMILY SSF55781 201 348 1.46E-11 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS02765 97bf6f11349f0b88112a0310e59926d2 546 Gene3D G3DSA:3.30.450.40 170 377 3.2E-18 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS02765 97bf6f11349f0b88112a0310e59926d2 546 SUPERFAMILY SSF55781 12 158 3.71E-8 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS02765 97bf6f11349f0b88112a0310e59926d2 546 Gene3D G3DSA:3.30.450.40 8 169 1.2E-8 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS13720 cce32407d13f2ab9f837b58bfc073e20 328 SUPERFAMILY SSF52518 3 190 2.59E-65 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS13720 cce32407d13f2ab9f837b58bfc073e20 328 Gene3D G3DSA:3.40.50.970 1 195 3.7E-62 T 29-03-2018 CVS42_RS13720 cce32407d13f2ab9f837b58bfc073e20 328 Gene3D G3DSA:3.40.50.920 196 324 1.4E-30 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CVS42_RS13720 cce32407d13f2ab9f837b58bfc073e20 328 Pfam PF02780 Transketolase, C-terminal domain 199 315 1.3E-33 T 29-03-2018 IPR033248 Transketolase, C-terminal domain CVS42_RS13720 cce32407d13f2ab9f837b58bfc073e20 328 SUPERFAMILY SSF52922 191 323 2.22E-35 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CVS42_RS13720 cce32407d13f2ab9f837b58bfc073e20 328 SMART SM00861 4 179 1.3E-63 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CVS42_RS13720 cce32407d13f2ab9f837b58bfc073e20 328 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 4.4E-47 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CVS42_RS08780 4dfd82963c596ee6452594e839740a9d 687 Pfam PF00128 Alpha amylase, catalytic domain 175 296 7.4E-14 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS08780 4dfd82963c596ee6452594e839740a9d 687 Gene3D G3DSA:3.20.20.80 144 564 1.0E-107 T 29-03-2018 CVS42_RS08780 4dfd82963c596ee6452594e839740a9d 687 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 6 651 6.6E-204 T 29-03-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 CVS42_RS08780 4dfd82963c596ee6452594e839740a9d 687 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 101 1.5E-15 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 CVS42_RS08780 4dfd82963c596ee6452594e839740a9d 687 SMART SM00642 155 558 9.2E-11 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS08780 4dfd82963c596ee6452594e839740a9d 687 Gene3D G3DSA:2.60.40.10 1 143 2.1E-31 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS08780 4dfd82963c596ee6452594e839740a9d 687 SUPERFAMILY SSF51011 580 681 2.81E-18 T 29-03-2018 CVS42_RS08780 4dfd82963c596ee6452594e839740a9d 687 Gene3D G3DSA:2.60.40.1180 581 685 5.0E-21 T 29-03-2018 CVS42_RS08780 4dfd82963c596ee6452594e839740a9d 687 SUPERFAMILY SSF81296 6 144 2.02E-36 T 29-03-2018 IPR014756 Immunoglobulin E-set CVS42_RS08780 4dfd82963c596ee6452594e839740a9d 687 SUPERFAMILY SSF51445 490 560 2.15E-125 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS08780 4dfd82963c596ee6452594e839740a9d 687 SUPERFAMILY SSF51445 130 461 2.15E-125 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS15585 c93d6db3393698bdc7a3aa665a8e63ef 522 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 313 370 3.1E-10 T 29-03-2018 CVS42_RS15585 c93d6db3393698bdc7a3aa665a8e63ef 522 Gene3D G3DSA:3.30.450.20 27 159 1.6E-26 T 29-03-2018 CVS42_RS15585 c93d6db3393698bdc7a3aa665a8e63ef 522 Pfam PF17203 Single cache domain 3 34 160 9.7E-24 T 29-03-2018 IPR033463 Single cache domain 3 CVS42_RS15585 c93d6db3393698bdc7a3aa665a8e63ef 522 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 516 1.9E-10 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS15585 c93d6db3393698bdc7a3aa665a8e63ef 522 Gene3D G3DSA:3.30.450.20 199 318 3.1E-4 T 29-03-2018 CVS42_RS15585 c93d6db3393698bdc7a3aa665a8e63ef 522 SUPERFAMILY SSF103190 32 161 2.83E-30 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CVS42_RS15585 c93d6db3393698bdc7a3aa665a8e63ef 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 2.7E-5 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS15585 c93d6db3393698bdc7a3aa665a8e63ef 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 465 2.7E-5 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS15585 c93d6db3393698bdc7a3aa665a8e63ef 522 Gene3D G3DSA:1.10.287.130 319 368 2.5E-13 T 29-03-2018 CVS42_RS15585 c93d6db3393698bdc7a3aa665a8e63ef 522 Gene3D G3DSA:3.30.565.10 373 521 3.0E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS15585 c93d6db3393698bdc7a3aa665a8e63ef 522 SMART SM00387 409 520 1.7E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS15585 c93d6db3393698bdc7a3aa665a8e63ef 522 SUPERFAMILY SSF55890 315 398 1.15E-9 T 29-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 CVS42_RS15585 c93d6db3393698bdc7a3aa665a8e63ef 522 SUPERFAMILY SSF55874 384 516 1.3E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS16570 3c9e83abd0d4c2c898cc71a55da0cabb 189 SMART SM00260 18 163 8.9E-35 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS16570 3c9e83abd0d4c2c898cc71a55da0cabb 189 SUPERFAMILY SSF50341 21 167 1.44E-36 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS16570 3c9e83abd0d4c2c898cc71a55da0cabb 189 Gene3D G3DSA:2.40.50.180 42 101 2.9E-19 T 29-03-2018 CVS42_RS16570 3c9e83abd0d4c2c898cc71a55da0cabb 189 Pfam PF01584 CheW-like domain 22 164 5.8E-35 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS16570 3c9e83abd0d4c2c898cc71a55da0cabb 189 Gene3D G3DSA:2.30.30.40 102 157 7.8E-19 T 29-03-2018 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 Pfam PF16353 Domain of unknown function(DUF4981) 615 699 2.0E-13 T 29-03-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 SMART SM01038 727 998 8.0E-121 T 29-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 Gene3D G3DSA:3.20.20.80 319 599 9.4E-67 T 29-03-2018 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 43 207 3.0E-50 T 29-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 Pfam PF00703 Glycosyl hydrolases family 2 209 318 2.5E-15 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 SUPERFAMILY SSF49785 2 207 6.24E-63 T 29-03-2018 IPR008979 Galactose-binding domain-like CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 506 521 3.6E-32 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 329 343 3.6E-32 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 435 450 3.6E-32 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 360 378 3.6E-32 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 3.6E-32 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 435 449 - T 29-03-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 Gene3D G3DSA:2.60.40.10 600 707 7.2E-20 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 370 395 - T 29-03-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 Gene3D G3DSA:2.60.40.10 209 318 3.6E-21 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 320 603 1.5E-110 T 29-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 SUPERFAMILY SSF49303 596 702 3.6E-19 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 Gene3D G3DSA:2.60.120.260 1 207 1.0E-61 T 29-03-2018 IPR008979 Galactose-binding domain-like CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 Pfam PF02929 Beta galactosidase small chain 729 997 1.4E-61 T 29-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 SUPERFAMILY SSF74650 713 999 8.48E-80 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 SUPERFAMILY SSF51445 320 598 1.45E-84 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 Gene3D G3DSA:2.70.98.10 710 999 1.9E-81 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CVS42_RS21400 a6ca2273d57efed37e7fd04bbd3f9255 1024 SUPERFAMILY SSF49303 210 318 7.2E-21 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CVS42_RS18205 8e67826969742cfa2444f77e0e704126 224 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 224 149.463 T 29-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 CVS42_RS18205 8e67826969742cfa2444f77e0e704126 224 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 219 1.7E-104 T 29-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 CVS42_RS18205 8e67826969742cfa2444f77e0e704126 224 SMART SM00927 53 151 3.4E-63 T 29-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 CVS42_RS18205 8e67826969742cfa2444f77e0e704126 224 Gene3D G3DSA:3.40.600.10 1 223 6.5E-56 T 29-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 CVS42_RS18205 8e67826969742cfa2444f77e0e704126 224 SUPERFAMILY SSF52980 1 220 4.08E-80 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CVS42_RS18205 8e67826969742cfa2444f77e0e704126 224 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 2.2E-33 T 29-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 CVS42_RS10330 c9afe6eb67d0798b7f8fb93905b44f6b 179 Pfam PF14316 Domain of unknown function (DUF4381) 49 158 1.5E-10 T 29-03-2018 IPR025489 Protein of unknown function (DUF4381 CVS42_RS07060 b3c9b8df27f0820aad4d0f5533eb30d8 402 PIRSF PIRSF000722 3 397 6.2E-137 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS07060 b3c9b8df27f0820aad4d0f5533eb30d8 402 Gene3D G3DSA:3.30.420.40 193 402 6.8E-75 T 29-03-2018 CVS42_RS07060 b3c9b8df27f0820aad4d0f5533eb30d8 402 Pfam PF00871 Acetokinase family 7 386 5.7E-145 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS07060 b3c9b8df27f0820aad4d0f5533eb30d8 402 SUPERFAMILY SSF53067 6 188 8.42E-61 T 29-03-2018 CVS42_RS07060 b3c9b8df27f0820aad4d0f5533eb30d8 402 TIGRFAM TIGR00016 ackA: acetate kinase 5 393 6.8E-152 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS07060 b3c9b8df27f0820aad4d0f5533eb30d8 402 Hamap MF_00020 Acetate kinase [ackA]. 1 396 158.6 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS07060 b3c9b8df27f0820aad4d0f5533eb30d8 402 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS07060 b3c9b8df27f0820aad4d0f5533eb30d8 402 SUPERFAMILY SSF53067 153 392 2.04E-84 T 29-03-2018 CVS42_RS07060 b3c9b8df27f0820aad4d0f5533eb30d8 402 PRINTS PR00471 Acetate kinase family signature 318 334 8.8E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS07060 b3c9b8df27f0820aad4d0f5533eb30d8 402 PRINTS PR00471 Acetate kinase family signature 374 386 8.8E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS07060 b3c9b8df27f0820aad4d0f5533eb30d8 402 PRINTS PR00471 Acetate kinase family signature 296 309 8.8E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS07060 b3c9b8df27f0820aad4d0f5533eb30d8 402 PRINTS PR00471 Acetate kinase family signature 169 182 8.8E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS07060 b3c9b8df27f0820aad4d0f5533eb30d8 402 PRINTS PR00471 Acetate kinase family signature 199 220 8.8E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS07060 b3c9b8df27f0820aad4d0f5533eb30d8 402 PRINTS PR00471 Acetate kinase family signature 7 18 8.8E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS07060 b3c9b8df27f0820aad4d0f5533eb30d8 402 Gene3D G3DSA:3.30.420.40 6 191 4.8E-64 T 29-03-2018 CVS42_RS07060 b3c9b8df27f0820aad4d0f5533eb30d8 402 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CVS42_RS09395 e7b9065f4fd0946ac02f80dddfed7803 218 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 9 217 2.1E-61 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CVS42_RS09395 e7b9065f4fd0946ac02f80dddfed7803 218 PIRSF PIRSF000495 6 218 2.5E-61 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CVS42_RS09395 e7b9065f4fd0946ac02f80dddfed7803 218 Pfam PF00117 Glutamine amidotransferase class-I 10 216 2.7E-17 T 29-03-2018 IPR017926 Glutamine amidotransferase CVS42_RS09395 e7b9065f4fd0946ac02f80dddfed7803 218 SUPERFAMILY SSF52317 7 217 2.96E-50 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS09395 e7b9065f4fd0946ac02f80dddfed7803 218 Gene3D G3DSA:3.40.50.880 2 218 1.1E-40 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS09395 e7b9065f4fd0946ac02f80dddfed7803 218 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 7 218 33.874 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CVS42_RS03255 9093f18ce65df6b62507e524429d2bf1 549 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 548 20.753 T 29-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CVS42_RS03255 9093f18ce65df6b62507e524429d2bf1 549 PIRSF PIRSF000076 1 549 1.2E-237 T 29-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CVS42_RS03255 9093f18ce65df6b62507e524429d2bf1 549 Gene3D G3DSA:1.20.1270.20 149 231 3.1E-19 T 29-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CVS42_RS03255 9093f18ce65df6b62507e524429d2bf1 549 Gene3D G3DSA:3.40.50.2030 234 374 9.6E-63 T 29-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CVS42_RS03255 9093f18ce65df6b62507e524429d2bf1 549 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 547 1.6E-226 T 29-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CVS42_RS03255 9093f18ce65df6b62507e524429d2bf1 549 Gene3D G3DSA:3.40.50.2030 375 549 6.1E-59 T 29-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CVS42_RS03255 9093f18ce65df6b62507e524429d2bf1 549 Gene3D G3DSA:1.20.1270.20 1 147 2.0E-39 T 29-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CVS42_RS03255 9093f18ce65df6b62507e524429d2bf1 549 SUPERFAMILY SSF56821 1 547 1.11E-189 T 29-03-2018 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CVS42_RS03255 9093f18ce65df6b62507e524429d2bf1 549 Pfam PF03063 Prismane/CO dehydrogenase family 1 543 2.8E-161 T 29-03-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CVS42_RS05040 0fb7ef13201237adecc2caff7e653688 266 SMART SM00342 173 254 1.6E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS05040 0fb7ef13201237adecc2caff7e653688 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 5.4E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS05040 0fb7ef13201237adecc2caff7e653688 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 5.4E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS05040 0fb7ef13201237adecc2caff7e653688 266 Gene3D G3DSA:1.10.10.60 87 206 0.0032 T 29-03-2018 CVS42_RS05040 0fb7ef13201237adecc2caff7e653688 266 Pfam PF12833 Helix-turn-helix domain 180 254 7.8E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS05040 0fb7ef13201237adecc2caff7e653688 266 SUPERFAMILY SSF46689 208 255 2.42E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS05040 0fb7ef13201237adecc2caff7e653688 266 Gene3D G3DSA:1.10.10.60 207 259 2.2E-16 T 29-03-2018 CVS42_RS14270 a72fa7bf02a16f70b8dc210cd4d5ff8a 104 SMART SM00418 16 94 3.7E-19 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CVS42_RS14270 a72fa7bf02a16f70b8dc210cd4d5ff8a 104 Gene3D G3DSA:1.10.10.10 2 103 4.6E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS14270 a72fa7bf02a16f70b8dc210cd4d5ff8a 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 2.3E-9 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CVS42_RS14270 a72fa7bf02a16f70b8dc210cd4d5ff8a 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 2.3E-9 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CVS42_RS14270 a72fa7bf02a16f70b8dc210cd4d5ff8a 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 2.3E-9 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CVS42_RS14270 a72fa7bf02a16f70b8dc210cd4d5ff8a 104 SUPERFAMILY SSF46785 7 98 4.96E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS14270 a72fa7bf02a16f70b8dc210cd4d5ff8a 104 Pfam PF01022 Bacterial regulatory protein, arsR family 23 69 4.6E-9 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 Gene3D G3DSA:3.40.50.970 1 254 7.9E-50 T 29-03-2018 CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 Gene3D G3DSA:4.10.780.10 635 669 7.9E-16 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 Gene3D G3DSA:3.40.50.920 255 415 2.2E-40 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 940 1070 2.5E-10 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 Gene3D G3DSA:3.40.920.10 418 621 2.6E-51 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 PIRSF PIRSF000159 1 1177 0.0 T 29-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 Gene3D G3DSA:3.30.70.20 670 792 1.5E-29 T 29-03-2018 CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 SUPERFAMILY SSF52518 2 254 6.03E-73 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 SUPERFAMILY SSF52518 797 1169 3.93E-124 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 Gene3D G3DSA:3.40.50.970 794 1172 1.1E-106 T 29-03-2018 CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 690 701 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 746 757 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 SUPERFAMILY SSF54862 666 838 2.51E-22 T 29-03-2018 CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 Pfam PF10371 Domain of unknown function 627 679 1.1E-23 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 Pfam PF12838 4Fe-4S dicluster domain 690 758 2.8E-10 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 SUPERFAMILY SSF52922 256 410 1.04E-41 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 427 608 1.7E-31 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1169 0.0 T 29-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 7.6E-80 T 29-03-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 350 5.0E-15 T 29-03-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 SUPERFAMILY SSF53323 420 669 1.83E-72 T 29-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CVS42_RS04855 a2c87538398633268f5be0634f3dc401 1177 SMART SM00890 623 680 3.2E-30 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CVS42_RS21070 80be87c0b9f9ab89ac4f4e63f39308f4 170 PIRSF PIRSF004749 1 169 3.0E-56 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS21070 80be87c0b9f9ab89ac4f4e63f39308f4 170 Pfam PF01327 Polypeptide deformylase 5 152 1.4E-49 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS21070 80be87c0b9f9ab89ac4f4e63f39308f4 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 8.1E-63 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS21070 80be87c0b9f9ab89ac4f4e63f39308f4 170 Gene3D G3DSA:3.90.45.10 1 170 2.7E-62 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS21070 80be87c0b9f9ab89ac4f4e63f39308f4 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.113 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS21070 80be87c0b9f9ab89ac4f4e63f39308f4 170 SUPERFAMILY SSF56420 2 164 3.27E-62 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS21070 80be87c0b9f9ab89ac4f4e63f39308f4 170 PRINTS PR01576 Peptide deformylase signature 120 149 3.0E-38 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS21070 80be87c0b9f9ab89ac4f4e63f39308f4 170 PRINTS PR01576 Peptide deformylase signature 89 100 3.0E-38 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS21070 80be87c0b9f9ab89ac4f4e63f39308f4 170 PRINTS PR01576 Peptide deformylase signature 101 119 3.0E-38 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS21070 80be87c0b9f9ab89ac4f4e63f39308f4 170 PRINTS PR01576 Peptide deformylase signature 33 62 3.0E-38 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS15900 53bb469287d8ff3874f8b37e47415ccc 663 Gene3D G3DSA:3.40.50.970 365 541 1.1E-42 T 29-03-2018 CVS42_RS15900 53bb469287d8ff3874f8b37e47415ccc 663 SUPERFAMILY SSF52518 5 329 1.11E-121 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS15900 53bb469287d8ff3874f8b37e47415ccc 663 SUPERFAMILY SSF52518 347 528 6.51E-69 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS15900 53bb469287d8ff3874f8b37e47415ccc 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 662 0.0 T 29-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CVS42_RS15900 53bb469287d8ff3874f8b37e47415ccc 663 SUPERFAMILY SSF52922 534 662 1.7E-42 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CVS42_RS15900 53bb469287d8ff3874f8b37e47415ccc 663 Pfam PF02779 Transketolase, pyrimidine binding domain 354 525 2.4E-46 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CVS42_RS15900 53bb469287d8ff3874f8b37e47415ccc 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CVS42_RS15900 53bb469287d8ff3874f8b37e47415ccc 663 Gene3D G3DSA:3.40.50.920 542 663 1.2E-29 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CVS42_RS15900 53bb469287d8ff3874f8b37e47415ccc 663 SMART SM00861 355 526 7.4E-68 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CVS42_RS15900 53bb469287d8ff3874f8b37e47415ccc 663 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CVS42_RS15900 53bb469287d8ff3874f8b37e47415ccc 663 Gene3D G3DSA:3.40.50.970 1 364 1.9E-127 T 29-03-2018 CVS42_RS15900 53bb469287d8ff3874f8b37e47415ccc 663 Pfam PF02780 Transketolase, C-terminal domain 541 656 1.9E-17 T 29-03-2018 IPR033248 Transketolase, C-terminal domain CVS42_RS15900 53bb469287d8ff3874f8b37e47415ccc 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 1.6E-166 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CVS42_RS08225 c5a6021229bea6aa16220f108e4b507a 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 2.7E-64 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS08225 c5a6021229bea6aa16220f108e4b507a 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 1.1E-31 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS08225 c5a6021229bea6aa16220f108e4b507a 172 SUPERFAMILY SSF141452 3 168 1.44E-39 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS08225 c5a6021229bea6aa16220f108e4b507a 172 Gene3D G3DSA:2.30.110.20 2 172 1.1E-50 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS16430 c5a6021229bea6aa16220f108e4b507a 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 2.7E-64 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS16430 c5a6021229bea6aa16220f108e4b507a 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 1.1E-31 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS16430 c5a6021229bea6aa16220f108e4b507a 172 SUPERFAMILY SSF141452 3 168 1.44E-39 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS16430 c5a6021229bea6aa16220f108e4b507a 172 Gene3D G3DSA:2.30.110.20 2 172 1.1E-50 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS18580 1cd55e83817d0c5b1a95bd6ec2bce5bc 315 SUPERFAMILY SSF53850 90 293 3.21E-40 T 29-03-2018 CVS42_RS18580 1cd55e83817d0c5b1a95bd6ec2bce5bc 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 2.0E-13 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS18580 1cd55e83817d0c5b1a95bd6ec2bce5bc 315 SUPERFAMILY SSF46785 5 112 7.71E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18580 1cd55e83817d0c5b1a95bd6ec2bce5bc 315 Gene3D G3DSA:1.10.10.10 1 91 1.1E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18580 1cd55e83817d0c5b1a95bd6ec2bce5bc 315 Gene3D G3DSA:3.40.190.10 183 266 2.4E-20 T 29-03-2018 CVS42_RS18580 1cd55e83817d0c5b1a95bd6ec2bce5bc 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.4E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS18580 1cd55e83817d0c5b1a95bd6ec2bce5bc 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.4E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS18580 1cd55e83817d0c5b1a95bd6ec2bce5bc 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.4E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS18580 1cd55e83817d0c5b1a95bd6ec2bce5bc 315 Gene3D G3DSA:3.40.190.10 92 182 1.5E-22 T 29-03-2018 CVS42_RS18580 1cd55e83817d0c5b1a95bd6ec2bce5bc 315 Pfam PF03466 LysR substrate binding domain 90 293 5.7E-40 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS00075 b17446f656e357d39df0034248dd8666 234 Gene3D G3DSA:1.10.10.10 1 64 2.6E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS00075 b17446f656e357d39df0034248dd8666 234 SUPERFAMILY SSF46785 1 62 2.18E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS00075 b17446f656e357d39df0034248dd8666 234 Pfam PF08279 HTH domain 6 59 6.1E-17 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 CVS42_RS00075 b17446f656e357d39df0034248dd8666 234 Pfam PF13280 WYL domain 139 226 1.6E-14 T 29-03-2018 IPR026881 WYL domain CVS42_RS21475 e7f0df85360ee47a966326f49f3b4be0 259 PIRSF PIRSF000441 74 257 5.4E-58 T 29-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CVS42_RS21475 e7f0df85360ee47a966326f49f3b4be0 259 PIRSF PIRSF000441 7 62 760.0 T 29-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CVS42_RS21475 e7f0df85360ee47a966326f49f3b4be0 259 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 81 241 1.2E-73 T 29-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CVS42_RS21475 e7f0df85360ee47a966326f49f3b4be0 259 SMART SM00971 8 112 7.0E-61 T 29-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CVS42_RS21475 e7f0df85360ee47a966326f49f3b4be0 259 SUPERFAMILY SSF51161 6 257 6.1E-64 T 29-03-2018 IPR011004 Trimeric LpxA-like CVS42_RS21475 e7f0df85360ee47a966326f49f3b4be0 259 Gene3D G3DSA:2.160.10.10 133 258 2.0E-32 T 29-03-2018 CVS42_RS21475 e7f0df85360ee47a966326f49f3b4be0 259 Gene3D G3DSA:1.10.3130.10 2 132 7.9E-40 T 29-03-2018 CVS42_RS21475 e7f0df85360ee47a966326f49f3b4be0 259 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 192 226 3.2E-6 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS21475 e7f0df85360ee47a966326f49f3b4be0 259 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 201 229 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CVS42_RS21475 e7f0df85360ee47a966326f49f3b4be0 259 Pfam PF06426 Serine acetyltransferase, N-terminal 9 111 5.5E-38 T 29-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CVS42_RS03175 be051847b9170a73350147982912284e 285 Gene3D G3DSA:3.40.50.620 1 176 7.5E-78 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS03175 be051847b9170a73350147982912284e 285 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 3 280 9.8E-109 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CVS42_RS03175 be051847b9170a73350147982912284e 285 SUPERFAMILY SSF52374 1 283 1.31E-106 T 29-03-2018 CVS42_RS03175 be051847b9170a73350147982912284e 285 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 84 3.8E-10 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CVS42_RS03175 be051847b9170a73350147982912284e 285 Gene3D G3DSA:3.30.1300.10 177 285 2.8E-29 T 29-03-2018 CVS42_RS03175 be051847b9170a73350147982912284e 285 Pfam PF02569 Pantoate-beta-alanine ligase 5 278 3.8E-103 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CVS42_RS03175 be051847b9170a73350147982912284e 285 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.339 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 SUPERFAMILY SSF88659 163 237 3.66E-14 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 48 324 1.3E-139 T 29-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 283 309 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 Gene3D G3DSA:1.10.10.10 253 319 4.0E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 SUPERFAMILY SSF88946 52 160 9.03E-46 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 2 324 39.544 T 29-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 86 313 3.6E-35 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 Pfam PF04545 Sigma-70, region 4 258 311 1.0E-17 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 Pfam PF04542 Sigma-70 region 2 90 159 1.4E-20 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 Gene3D G3DSA:1.10.601.10 2 159 4.3E-61 T 29-03-2018 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 Pfam PF04539 Sigma-70 region 3 170 243 1.6E-18 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 SUPERFAMILY SSF88659 220 318 2.24E-23 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 Gene3D G3DSA:1.10.10.10 160 210 9.9E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 Pfam PF00140 Sigma-70 factor, region 1.2 52 85 1.2E-12 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 PRINTS PR00046 Major sigma-70 factor signature 138 146 3.4E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 PRINTS PR00046 Major sigma-70 factor signature 283 298 3.4E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 PRINTS PR00046 Major sigma-70 factor signature 114 127 3.4E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 PRINTS PR00046 Major sigma-70 factor signature 262 274 3.4E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 PRINTS PR00046 Major sigma-70 factor signature 298 309 3.4E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS03475 bcdb9c1968dde638b2993e77978543cb 327 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 114 127 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS22125 87f263a3e91d47a269d78f40dba9d6cd 513 Gene3D G3DSA:2.40.30.20 3 82 1.8E-28 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22125 87f263a3e91d47a269d78f40dba9d6cd 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 1.0E-254 T 29-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22125 87f263a3e91d47a269d78f40dba9d6cd 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.8E-74 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS22125 87f263a3e91d47a269d78f40dba9d6cd 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 5.5E-44 T 29-03-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22125 87f263a3e91d47a269d78f40dba9d6cd 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.003 T 29-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22125 87f263a3e91d47a269d78f40dba9d6cd 513 SUPERFAMILY SSF47917 383 511 4.97E-44 T 29-03-2018 CVS42_RS22125 87f263a3e91d47a269d78f40dba9d6cd 513 SUPERFAMILY SSF50615 10 94 2.88E-26 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS22125 87f263a3e91d47a269d78f40dba9d6cd 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS22125 87f263a3e91d47a269d78f40dba9d6cd 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 1.3E-15 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS22125 87f263a3e91d47a269d78f40dba9d6cd 513 Gene3D G3DSA:1.20.150.20 384 510 7.4E-44 T 29-03-2018 CVS42_RS22125 87f263a3e91d47a269d78f40dba9d6cd 513 SUPERFAMILY SSF52540 96 381 3.72E-96 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS22125 87f263a3e91d47a269d78f40dba9d6cd 513 Gene3D G3DSA:3.40.50.300 83 375 1.4E-113 T 29-03-2018 CVS42_RS07830 8e3791c9c87b0eb86624877455cc6e28 442 Pfam PF00583 Acetyltransferase (GNAT) family 335 412 3.9E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS07830 8e3791c9c87b0eb86624877455cc6e28 442 SUPERFAMILY SSF53633 6 292 2.75E-65 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS07830 8e3791c9c87b0eb86624877455cc6e28 442 PIRSF PIRSF000423 1 441 6.2E-200 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CVS42_RS07830 8e3791c9c87b0eb86624877455cc6e28 442 Gene3D G3DSA:3.40.1160.10 6 294 5.3E-57 T 29-03-2018 CVS42_RS07830 8e3791c9c87b0eb86624877455cc6e28 442 Gene3D G3DSA:3.40.630.30 296 441 2.8E-20 T 29-03-2018 CVS42_RS07830 8e3791c9c87b0eb86624877455cc6e28 442 SUPERFAMILY SSF55729 298 419 4.05E-18 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS07830 8e3791c9c87b0eb86624877455cc6e28 442 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 440 7.7E-192 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CVS42_RS07830 8e3791c9c87b0eb86624877455cc6e28 442 Pfam PF00696 Amino acid kinase family 26 266 4.8E-26 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS07830 8e3791c9c87b0eb86624877455cc6e28 442 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 222.442 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CVS42_RS14690 dba6ab45ada0f48b6ac20a6634644819 293 Gene3D G3DSA:3.20.20.140 1 260 3.7E-47 T 29-03-2018 CVS42_RS14690 dba6ab45ada0f48b6ac20a6634644819 293 SUPERFAMILY SSF89550 165 268 1.57E-52 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CVS42_RS14690 dba6ab45ada0f48b6ac20a6634644819 293 SUPERFAMILY SSF89550 1 83 1.57E-52 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CVS42_RS14690 dba6ab45ada0f48b6ac20a6634644819 293 Pfam PF02811 PHP domain 4 183 1.4E-8 T 29-03-2018 IPR004013 PHP domain GO:0003824 CVS42_RS14690 dba6ab45ada0f48b6ac20a6634644819 293 SMART SM00481 3 70 1.1E-20 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CVS42_RS11520 d41bca29896b6a092d46dace80886a56 169 TIGRFAM TIGR02794 tolA_full: protein TolA 69 167 3.9E-21 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CVS42_RS11520 d41bca29896b6a092d46dace80886a56 169 SUPERFAMILY SSF74653 81 167 1.47E-15 T 29-03-2018 CVS42_RS11520 d41bca29896b6a092d46dace80886a56 169 Gene3D G3DSA:3.30.1150.10 68 168 6.3E-16 T 29-03-2018 CVS42_RS11520 d41bca29896b6a092d46dace80886a56 169 Pfam PF06519 TolA C-terminal 77 164 2.5E-22 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CVS42_RS03455 838944025510168b8ae0afc551de365a 253 SUPERFAMILY SSF64167 1 249 8.11E-86 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CVS42_RS03455 838944025510168b8ae0afc551de365a 253 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 252 41.02 T 29-03-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CVS42_RS03455 838944025510168b8ae0afc551de365a 253 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 237 1.7E-76 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CVS42_RS03455 838944025510168b8ae0afc551de365a 253 Gene3D G3DSA:3.40.1210.10 1 252 6.6E-87 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CVS42_RS03455 838944025510168b8ae0afc551de365a 253 Pfam PF01975 Survival protein SurE 3 186 5.1E-62 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 SUPERFAMILY SSF51621 1 75 2.71E-87 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 SUPERFAMILY SSF51621 167 343 2.71E-87 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 Gene3D G3DSA:3.40.1380.20 324 475 3.0E-27 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 Gene3D G3DSA:3.20.20.60 1 81 1.0E-15 T 29-03-2018 CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 Pfam PF00224 Pyruvate kinase, barrel domain 1 343 1.0E-122 T 29-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 Pfam PF02887 Pyruvate kinase, alpha/beta domain 362 435 1.8E-7 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 SUPERFAMILY SSF50800 70 165 1.01E-23 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 Gene3D G3DSA:2.40.33.10 82 166 1.6E-23 T 29-03-2018 CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 473 4.1E-146 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 SUPERFAMILY SSF52935 325 439 1.68E-16 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 Gene3D G3DSA:3.20.20.60 167 323 3.1E-54 T 29-03-2018 CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.6E-54 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 PRINTS PR01050 Pyruvate kinase family signature 271 295 1.6E-54 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.6E-54 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 PRINTS PR01050 Pyruvate kinase family signature 219 245 1.6E-54 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 PRINTS PR01050 Pyruvate kinase family signature 315 331 1.6E-54 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 PRINTS PR01050 Pyruvate kinase family signature 246 270 1.6E-54 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS00200 46f806af723d8459d0d9b34acc1f10d1 492 PRINTS PR01050 Pyruvate kinase family signature 296 314 1.6E-54 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS21110 7ae26f1fefe0be817f0060719874eccb 351 Gene3D G3DSA:3.30.450.20 3 121 6.5E-17 T 29-03-2018 CVS42_RS21110 7ae26f1fefe0be817f0060719874eccb 351 SUPERFAMILY SSF55785 9 107 4.54E-11 T 29-03-2018 IPR000014 PAS domain CVS42_RS21110 7ae26f1fefe0be817f0060719874eccb 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 237 350 1.3E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS21110 7ae26f1fefe0be817f0060719874eccb 351 SMART SM00091 6 74 7.9E-4 T 29-03-2018 IPR000014 PAS domain CVS42_RS21110 7ae26f1fefe0be817f0060719874eccb 351 SMART SM00388 131 196 5.8E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS21110 7ae26f1fefe0be817f0060719874eccb 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 283 297 8.1E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS21110 7ae26f1fefe0be817f0060719874eccb 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 330 8.1E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS21110 7ae26f1fefe0be817f0060719874eccb 351 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 122 7.4E-8 T 29-03-2018 IPR000014 PAS domain CVS42_RS21110 7ae26f1fefe0be817f0060719874eccb 351 SUPERFAMILY SSF47384 124 195 1.79E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS21110 7ae26f1fefe0be817f0060719874eccb 351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 192 2.2E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS21110 7ae26f1fefe0be817f0060719874eccb 351 Gene3D G3DSA:1.10.287.130 122 192 5.6E-14 T 29-03-2018 CVS42_RS21110 7ae26f1fefe0be817f0060719874eccb 351 SMART SM00387 235 351 1.1E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS21110 7ae26f1fefe0be817f0060719874eccb 351 Gene3D G3DSA:3.30.565.10 193 351 6.2E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS21110 7ae26f1fefe0be817f0060719874eccb 351 Pfam PF00989 PAS fold 10 108 4.4E-14 T 29-03-2018 IPR013767 PAS fold GO:0006355 CVS42_RS21110 7ae26f1fefe0be817f0060719874eccb 351 SUPERFAMILY SSF55874 198 348 6.42E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS20400 ba7abc068c68ee8b0ea3fcdfa54a8a16 553 SMART SM00963 254 334 7.4E-22 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CVS42_RS20400 ba7abc068c68ee8b0ea3fcdfa54a8a16 553 Gene3D G3DSA:1.20.120.140 254 335 1.6E-20 T 29-03-2018 CVS42_RS20400 ba7abc068c68ee8b0ea3fcdfa54a8a16 553 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 277 550 64.179 T 29-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CVS42_RS20400 ba7abc068c68ee8b0ea3fcdfa54a8a16 553 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 523 536 - T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CVS42_RS20400 ba7abc068c68ee8b0ea3fcdfa54a8a16 553 Gene3D G3DSA:3.40.50.300 348 461 3.8E-16 T 29-03-2018 CVS42_RS20400 ba7abc068c68ee8b0ea3fcdfa54a8a16 553 Gene3D G3DSA:2.160.10.10 94 253 5.9E-6 T 29-03-2018 CVS42_RS20400 ba7abc068c68ee8b0ea3fcdfa54a8a16 553 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 277 549 1.2E-112 T 29-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CVS42_RS20400 ba7abc068c68ee8b0ea3fcdfa54a8a16 553 SMART SM00962 349 550 4.6E-123 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CVS42_RS20400 ba7abc068c68ee8b0ea3fcdfa54a8a16 553 Pfam PF00448 SRP54-type protein, GTPase domain 350 549 3.6E-76 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CVS42_RS20400 ba7abc068c68ee8b0ea3fcdfa54a8a16 553 Pfam PF02881 SRP54-type protein, helical bundle domain 267 328 1.0E-10 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CVS42_RS20400 ba7abc068c68ee8b0ea3fcdfa54a8a16 553 SUPERFAMILY SSF47364 249 327 3.79E-21 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CVS42_RS20400 ba7abc068c68ee8b0ea3fcdfa54a8a16 553 SMART SM00382 348 539 3.7E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS20400 ba7abc068c68ee8b0ea3fcdfa54a8a16 553 Gene3D G3DSA:1.20.120.140 462 553 9.1E-22 T 29-03-2018 CVS42_RS20400 ba7abc068c68ee8b0ea3fcdfa54a8a16 553 SUPERFAMILY SSF52540 345 550 5.14E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 271 281 4.9E-28 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 417 426 4.9E-28 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 454 473 4.9E-28 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 479 488 4.9E-28 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 523 539 4.9E-28 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 383 390 4.9E-28 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 492 503 4.9E-28 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 546 554 4.9E-28 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 11 597 1.5E-245 T 29-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 SUPERFAMILY SSF52218 64 211 2.67E-47 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 SUPERFAMILY SSF52343 442 597 1.83E-52 T 29-03-2018 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 Gene3D G3DSA:3.40.50.80 440 596 2.8E-37 T 29-03-2018 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 Pfam PF00667 FAD binding domain 232 422 5.2E-26 T 29-03-2018 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 SUPERFAMILY SSF63380 230 444 5.83E-60 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 Pfam PF00175 Oxidoreductase NAD-binding domain 455 561 8.1E-19 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 Gene3D G3DSA:3.40.50.360 44 221 1.2E-42 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 PIRSF PIRSF000207 2 597 4.9E-251 T 29-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 Gene3D G3DSA:2.40.30.10 222 436 1.5E-43 T 29-03-2018 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 Pfam PF00258 Flavodoxin 67 194 3.1E-33 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 PRINTS PR00369 Flavodoxin signature 146 156 9.3E-17 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 PRINTS PR00369 Flavodoxin signature 66 79 9.3E-17 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 PRINTS PR00369 Flavodoxin signature 170 189 9.3E-17 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CVS42_RS04330 2e5c44e791b4c398f45eea0fcc06d66e 597 PRINTS PR00369 Flavodoxin signature 114 125 9.3E-17 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CVS42_RS16395 141a076fdd0b69c6227409de40dbfaac 141 Pfam PF02169 LPP20 lipoprotein 50 126 2.8E-10 T 29-03-2018 IPR024952 Lipoprotein LPP20-like CVS42_RS16395 141a076fdd0b69c6227409de40dbfaac 141 PIRSF PIRSF028687 1 140 1.3E-35 T 29-03-2018 IPR007293 Flagellar protein FlgP CVS42_RS02145 9d346166fe51c5a5a17d688b82fecee5 640 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 380 456 1.7E-11 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CVS42_RS02145 9d346166fe51c5a5a17d688b82fecee5 640 SUPERFAMILY SSF55804 497 634 5.62E-35 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CVS42_RS02145 9d346166fe51c5a5a17d688b82fecee5 640 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 498 634 2.3E-28 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CVS42_RS02145 9d346166fe51c5a5a17d688b82fecee5 640 Gene3D G3DSA:3.40.930.10 493 638 1.7E-30 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CVS42_RS02145 9d346166fe51c5a5a17d688b82fecee5 640 Gene3D G3DSA:3.40.50.2300 366 471 6.0E-18 T 29-03-2018 CVS42_RS02145 9d346166fe51c5a5a17d688b82fecee5 640 Pfam PF02378 Phosphotransferase system, EIIC 18 277 6.5E-18 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CVS42_RS02145 9d346166fe51c5a5a17d688b82fecee5 640 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 4.0E-170 T 29-03-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CVS42_RS02145 9d346166fe51c5a5a17d688b82fecee5 640 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 540 556 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain CVS42_RS02145 9d346166fe51c5a5a17d688b82fecee5 640 SUPERFAMILY SSF52794 378 465 9.16E-23 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CVS42_RS10340 5b73bca2b539c9b9e662411961ed3314 483 Gene3D G3DSA:3.30.70.100 318 369 0.13 T 29-03-2018 CVS42_RS10340 5b73bca2b539c9b9e662411961ed3314 483 Pfam PF13519 von Willebrand factor type A domain 82 184 2.0E-12 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS10340 5b73bca2b539c9b9e662411961ed3314 483 Gene3D G3DSA:1.25.40.10 370 470 1.8E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS10340 5b73bca2b539c9b9e662411961ed3314 483 Pfam PF00515 Tetratricopeptide repeat 382 414 1.1E-7 T 29-03-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CVS42_RS10340 5b73bca2b539c9b9e662411961ed3314 483 Gene3D G3DSA:3.40.50.410 80 282 1.2E-13 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS10340 5b73bca2b539c9b9e662411961ed3314 483 SUPERFAMILY SSF53300 82 193 7.08E-14 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS10340 5b73bca2b539c9b9e662411961ed3314 483 SMART SM00028 382 415 5.7E-7 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS10340 5b73bca2b539c9b9e662411961ed3314 483 SUPERFAMILY SSF48452 336 425 1.39E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS08335 faf4ef61d8b98f573cc011f9d86d0723 264 Gene3D G3DSA:1.10.800.10 1 258 2.6E-93 T 29-03-2018 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 CVS42_RS08335 faf4ef61d8b98f573cc011f9d86d0723 264 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 116 127 - T 29-03-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 CVS42_RS08335 faf4ef61d8b98f573cc011f9d86d0723 264 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 9 252 7.3E-104 T 29-03-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 CVS42_RS08335 faf4ef61d8b98f573cc011f9d86d0723 264 SUPERFAMILY SSF56534 5 247 3.79E-99 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 CVS42_RS08335 faf4ef61d8b98f573cc011f9d86d0723 264 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 15 229 5.2E-47 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 CVS42_RS08335 faf4ef61d8b98f573cc011f9d86d0723 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 73 95 2.3E-10 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 CVS42_RS08335 faf4ef61d8b98f573cc011f9d86d0723 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 177 195 2.3E-10 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 CVS42_RS08335 faf4ef61d8b98f573cc011f9d86d0723 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 2.3E-10 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 CVS42_RS03280 747128da180e77b889f2efc4a482d108 440 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 117 439 4.7E-24 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CVS42_RS03280 747128da180e77b889f2efc4a482d108 440 Gene3D G3DSA:2.40.50.140 1 82 3.1E-26 T 29-03-2018 CVS42_RS03280 747128da180e77b889f2efc4a482d108 440 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 432 8.7E-119 T 29-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CVS42_RS03280 747128da180e77b889f2efc4a482d108 440 SUPERFAMILY SSF50249 4 66 1.09E-13 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS03280 747128da180e77b889f2efc4a482d108 440 Gene3D G3DSA:3.40.50.150 83 438 1.3E-53 T 29-03-2018 CVS42_RS03280 747128da180e77b889f2efc4a482d108 440 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 422 432 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site CVS42_RS03280 747128da180e77b889f2efc4a482d108 440 Pfam PF01938 TRAM domain 15 64 9.4E-9 T 29-03-2018 IPR002792 TRAM domain CVS42_RS03280 747128da180e77b889f2efc4a482d108 440 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 371 401 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site CVS42_RS03280 747128da180e77b889f2efc4a482d108 440 SUPERFAMILY SSF53335 76 439 2.57E-85 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS03280 747128da180e77b889f2efc4a482d108 440 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 440 67.026 T 29-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CVS42_RS13290 021ce3a1758b97e118973307186d3a10 281 Pfam PF01636 Phosphotransferase enzyme family 28 231 5.9E-13 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CVS42_RS13290 021ce3a1758b97e118973307186d3a10 281 SUPERFAMILY SSF56112 25 278 5.1E-28 T 29-03-2018 IPR011009 Protein kinase-like domain CVS42_RS13290 021ce3a1758b97e118973307186d3a10 281 Gene3D G3DSA:3.90.1200.10 106 281 2.9E-15 T 29-03-2018 CVS42_RS03030 0c4c984304ca7a5996eb4a2f16a79a35 574 Pfam PF03600 Citrate transporter 19 518 5.2E-29 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CVS42_RS03030 0c4c984304ca7a5996eb4a2f16a79a35 574 SUPERFAMILY SSF116726 290 350 4.58E-14 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS03030 0c4c984304ca7a5996eb4a2f16a79a35 574 Pfam PF02080 TrkA-C domain 210 275 3.5E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS03030 0c4c984304ca7a5996eb4a2f16a79a35 574 Pfam PF02080 TrkA-C domain 293 349 4.8E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS03030 0c4c984304ca7a5996eb4a2f16a79a35 574 Gene3D G3DSA:3.30.70.1450 290 358 6.0E-15 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS03030 0c4c984304ca7a5996eb4a2f16a79a35 574 Gene3D G3DSA:3.30.70.1450 206 282 1.2E-13 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS03030 0c4c984304ca7a5996eb4a2f16a79a35 574 SUPERFAMILY SSF116726 198 282 1.96E-15 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS16875 c5c2fbb49981c2fe82e0e6907f209817 282 SUPERFAMILY SSF46785 3 81 3.2E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS16875 c5c2fbb49981c2fe82e0e6907f209817 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 34 7.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS16875 c5c2fbb49981c2fe82e0e6907f209817 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 13 24 7.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS16875 c5c2fbb49981c2fe82e0e6907f209817 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 7.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS16875 c5c2fbb49981c2fe82e0e6907f209817 282 Gene3D G3DSA:3.40.190.10 84 171 1.7E-15 T 29-03-2018 CVS42_RS16875 c5c2fbb49981c2fe82e0e6907f209817 282 Gene3D G3DSA:3.40.190.10 172 249 1.1E-18 T 29-03-2018 CVS42_RS16875 c5c2fbb49981c2fe82e0e6907f209817 282 Pfam PF03466 LysR substrate binding domain 83 279 1.7E-45 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS16875 c5c2fbb49981c2fe82e0e6907f209817 282 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 57 5.5E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS16875 c5c2fbb49981c2fe82e0e6907f209817 282 Gene3D G3DSA:1.10.10.10 1 78 3.8E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS16875 c5c2fbb49981c2fe82e0e6907f209817 282 SUPERFAMILY SSF53850 84 279 1.61E-46 T 29-03-2018 CVS42_RS04685 ee74e369e1fba2effe59d258ec3ee7c8 594 PIRSF PIRSF000171 1 576 1.9E-44 T 29-03-2018 CVS42_RS04685 ee74e369e1fba2effe59d258ec3ee7c8 594 Gene3D G3DSA:1.20.58.100 447 549 6.9E-27 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS04685 ee74e369e1fba2effe59d258ec3ee7c8 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 6.9E-9 T 29-03-2018 CVS42_RS04685 ee74e369e1fba2effe59d258ec3ee7c8 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.9E-9 T 29-03-2018 CVS42_RS04685 ee74e369e1fba2effe59d258ec3ee7c8 594 SUPERFAMILY SSF46977 444 587 9.03E-47 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS04685 ee74e369e1fba2effe59d258ec3ee7c8 594 SUPERFAMILY SSF51905 361 420 1.05E-74 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS04685 ee74e369e1fba2effe59d258ec3ee7c8 594 SUPERFAMILY SSF51905 4 250 1.05E-74 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS04685 ee74e369e1fba2effe59d258ec3ee7c8 594 Pfam PF00890 FAD binding domain 7 397 6.2E-112 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS04685 ee74e369e1fba2effe59d258ec3ee7c8 594 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 580 3.9E-39 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS04685 ee74e369e1fba2effe59d258ec3ee7c8 594 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 4 581 0.0 T 29-03-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 CVS42_RS04685 ee74e369e1fba2effe59d258ec3ee7c8 594 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 580 6.6E-236 T 29-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS04685 ee74e369e1fba2effe59d258ec3ee7c8 594 SUPERFAMILY SSF56425 227 358 6.28E-41 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS04685 ee74e369e1fba2effe59d258ec3ee7c8 594 Gene3D G3DSA:3.50.50.60 4 446 1.5E-62 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS04685 ee74e369e1fba2effe59d258ec3ee7c8 594 Gene3D G3DSA:4.10.80.40 550 580 2.6E-11 T 29-03-2018 CVS42_RS04685 ee74e369e1fba2effe59d258ec3ee7c8 594 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 29-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS13045 f3d1b9391aac61ab2d70bbdd5632946f 77 Gene3D G3DSA:1.10.1200.10 1 75 6.4E-9 T 29-03-2018 CVS42_RS13045 f3d1b9391aac61ab2d70bbdd5632946f 77 Pfam PF00550 Phosphopantetheine attachment site 5 64 3.4E-5 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CVS42_RS13045 f3d1b9391aac61ab2d70bbdd5632946f 77 SUPERFAMILY SSF47336 4 72 1.07E-9 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CVS42_RS09405 8ee29eac92b1b7a93a490e7c5367903e 356 Gene3D G3DSA:3.90.1150.10 2 59 1.2E-4 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS09405 8ee29eac92b1b7a93a490e7c5367903e 356 SUPERFAMILY SSF53383 5 350 4.13E-73 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS09405 8ee29eac92b1b7a93a490e7c5367903e 356 Gene3D G3DSA:3.90.1150.10 242 352 1.3E-11 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS09405 8ee29eac92b1b7a93a490e7c5367903e 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 352 53.041 T 29-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CVS42_RS09405 8ee29eac92b1b7a93a490e7c5367903e 356 Gene3D G3DSA:3.40.640.10 60 241 7.9E-36 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS09405 8ee29eac92b1b7a93a490e7c5367903e 356 Pfam PF00155 Aminotransferase class I and II 44 345 1.4E-49 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CVS42_RS09405 8ee29eac92b1b7a93a490e7c5367903e 356 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 208 217 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CVS42_RS09405 8ee29eac92b1b7a93a490e7c5367903e 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 350 5.8E-110 T 29-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CVS42_RS03185 b2c5287709c450b95a70846db5dabc50 454 SUPERFAMILY SSF118215 26 435 1.7E-81 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS03185 b2c5287709c450b95a70846db5dabc50 454 Pfam PF00375 Sodium:dicarboxylate symporter family 28 435 1.6E-91 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS03185 b2c5287709c450b95a70846db5dabc50 454 PRINTS PR00173 Glutamate-aspartate symporter signature 176 198 1.0E-20 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS03185 b2c5287709c450b95a70846db5dabc50 454 PRINTS PR00173 Glutamate-aspartate symporter signature 72 92 1.0E-20 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS03185 b2c5287709c450b95a70846db5dabc50 454 PRINTS PR00173 Glutamate-aspartate symporter signature 390 410 1.0E-20 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS03185 b2c5287709c450b95a70846db5dabc50 454 PRINTS PR00173 Glutamate-aspartate symporter signature 24 44 1.0E-20 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS03185 b2c5287709c450b95a70846db5dabc50 454 PRINTS PR00173 Glutamate-aspartate symporter signature 363 382 1.0E-20 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS03185 b2c5287709c450b95a70846db5dabc50 454 Gene3D G3DSA:1.10.3860.10 15 443 7.2E-78 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS07295 0567e3d5c48d1bdd7e59e932835b9e00 393 SUPERFAMILY SSF53850 25 391 2.17E-91 T 29-03-2018 CVS42_RS07295 0567e3d5c48d1bdd7e59e932835b9e00 393 Gene3D G3DSA:3.40.190.10 151 393 1.4E-39 T 29-03-2018 CVS42_RS07295 0567e3d5c48d1bdd7e59e932835b9e00 393 Gene3D G3DSA:3.40.190.10 27 150 1.6E-11 T 29-03-2018 CVS42_RS07295 0567e3d5c48d1bdd7e59e932835b9e00 393 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 130 147 - T 29-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 CVS42_RS07295 0567e3d5c48d1bdd7e59e932835b9e00 393 Pfam PF13416 Bacterial extracellular solute-binding protein 47 341 4.7E-43 T 29-03-2018 CVS42_RS07295 0567e3d5c48d1bdd7e59e932835b9e00 393 PRINTS PR00181 Maltose binding protein signature 148 167 4.1E-64 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CVS42_RS07295 0567e3d5c48d1bdd7e59e932835b9e00 393 PRINTS PR00181 Maltose binding protein signature 354 373 4.1E-64 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CVS42_RS07295 0567e3d5c48d1bdd7e59e932835b9e00 393 PRINTS PR00181 Maltose binding protein signature 230 249 4.1E-64 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CVS42_RS07295 0567e3d5c48d1bdd7e59e932835b9e00 393 PRINTS PR00181 Maltose binding protein signature 127 146 4.1E-64 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CVS42_RS07295 0567e3d5c48d1bdd7e59e932835b9e00 393 PRINTS PR00181 Maltose binding protein signature 168 187 4.1E-64 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CVS42_RS07295 0567e3d5c48d1bdd7e59e932835b9e00 393 PRINTS PR00181 Maltose binding protein signature 296 317 4.1E-64 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CVS42_RS07295 0567e3d5c48d1bdd7e59e932835b9e00 393 PRINTS PR00181 Maltose binding protein signature 67 85 4.1E-64 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CVS42_RS07295 0567e3d5c48d1bdd7e59e932835b9e00 393 PRINTS PR00181 Maltose binding protein signature 33 51 4.1E-64 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CVS42_RS09535 1545219b93880ecf8a44a88a3ec3b0f0 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 32.744 T 29-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 CVS42_RS09535 1545219b93880ecf8a44a88a3ec3b0f0 193 SUPERFAMILY SSF51283 1 193 2.49E-58 T 29-03-2018 IPR029054 dUTPase-like CVS42_RS09535 1545219b93880ecf8a44a88a3ec3b0f0 193 Gene3D G3DSA:2.70.40.10 2 167 2.9E-43 T 29-03-2018 CVS42_RS09535 1545219b93880ecf8a44a88a3ec3b0f0 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 1.2E-63 T 29-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 CVS42_RS09535 1545219b93880ecf8a44a88a3ec3b0f0 193 Pfam PF00692 dUTPase 78 184 3.9E-7 T 29-03-2018 IPR029054 dUTPase-like CVS42_RS02755 62abbd8dc2c130090028437f9317d33d 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 155 217 4.8E-16 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS02755 62abbd8dc2c130090028437f9317d33d 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 161 177 1.2E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS02755 62abbd8dc2c130090028437f9317d33d 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 37 48 1.2E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS02755 62abbd8dc2c130090028437f9317d33d 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 206 219 1.2E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS02755 62abbd8dc2c130090028437f9317d33d 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 179 199 1.2E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS02755 62abbd8dc2c130090028437f9317d33d 227 Gene3D G3DSA:1.10.150.240 52 100 4.3E-11 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CVS42_RS02755 62abbd8dc2c130090028437f9317d33d 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 40 217 4.5E-29 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS02755 62abbd8dc2c130090028437f9317d33d 227 Gene3D G3DSA:3.40.50.1000 101 224 6.3E-26 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS02755 62abbd8dc2c130090028437f9317d33d 227 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 38 217 6.0E-48 T 29-03-2018 IPR010976 Beta-phosphoglucomutase hydrolase CVS42_RS02755 62abbd8dc2c130090028437f9317d33d 227 SUPERFAMILY SSF56784 38 220 3.34E-48 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS21845 2848327a36e8762e865d961c8ffd8b87 423 Gene3D G3DSA:1.10.3470.10 7 406 7.9E-42 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CVS42_RS21845 2848327a36e8762e865d961c8ffd8b87 423 Pfam PF02653 Branched-chain amino acid transport system / permease component 118 404 9.9E-53 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CVS42_RS21845 2848327a36e8762e865d961c8ffd8b87 423 Pfam PF11862 Domain of unknown function (DUF3382) 5 109 3.3E-13 T 29-03-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CVS42_RS20040 00e820d03933f3db78aeb877bf87ba6f 296 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 289 8.1E-40 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS20040 00e820d03933f3db78aeb877bf87ba6f 296 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 139 291 1.3E-40 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS20040 00e820d03933f3db78aeb877bf87ba6f 296 Gene3D G3DSA:3.30.450.20 4 153 3.5E-15 T 29-03-2018 CVS42_RS20040 00e820d03933f3db78aeb877bf87ba6f 296 SMART SM00267 130 293 1.1E-50 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS20040 00e820d03933f3db78aeb877bf87ba6f 296 SUPERFAMILY SSF55073 146 292 2.43E-43 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS20040 00e820d03933f3db78aeb877bf87ba6f 296 Gene3D G3DSA:3.30.70.270 154 295 1.8E-48 T 29-03-2018 CVS42_RS20040 00e820d03933f3db78aeb877bf87ba6f 296 SUPERFAMILY SSF55785 6 83 4.71E-6 T 29-03-2018 IPR000014 PAS domain CVS42_RS08925 7d343288cd2385c8439bc5bed8ab749a 450 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 438 1.3E-157 T 29-03-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 CVS42_RS08925 7d343288cd2385c8439bc5bed8ab749a 450 Pfam PF03606 C4-dicarboxylate anaerobic carrier 3 448 1.2E-120 T 29-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 CVS42_RS04995 813405fe10c3e75ffc335bc3d7f271a2 362 Gene3D G3DSA:1.20.58.410 4 103 3.7E-20 T 29-03-2018 CVS42_RS04995 813405fe10c3e75ffc335bc3d7f271a2 362 SUPERFAMILY SSF75620 12 355 1.83E-136 T 29-03-2018 CVS42_RS04995 813405fe10c3e75ffc335bc3d7f271a2 362 Pfam PF00472 RF-1 domain 216 323 1.4E-40 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CVS42_RS04995 813405fe10c3e75ffc335bc3d7f271a2 362 Gene3D G3DSA:3.30.160.20 211 293 4.7E-34 T 29-03-2018 CVS42_RS04995 813405fe10c3e75ffc335bc3d7f271a2 362 Pfam PF03462 PCRF domain 14 205 2.0E-76 T 29-03-2018 IPR005139 Peptide chain release factor GO:0006415 CVS42_RS04995 813405fe10c3e75ffc335bc3d7f271a2 362 SMART SM00937 66 180 1.2E-66 T 29-03-2018 IPR005139 Peptide chain release factor GO:0006415 CVS42_RS04995 813405fe10c3e75ffc335bc3d7f271a2 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.125 T 29-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CVS42_RS04995 813405fe10c3e75ffc335bc3d7f271a2 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CVS42_RS04995 813405fe10c3e75ffc335bc3d7f271a2 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 3.6E-170 T 29-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CVS42_RS18840 07d76f29aa90851ca70a0c85674e3740 152 Gene3D G3DSA:2.10.260.10 6 46 0.0016 T 29-03-2018 CVS42_RS18840 07d76f29aa90851ca70a0c85674e3740 152 Gene3D G3DSA:2.10.260.10 80 129 1.3E-4 T 29-03-2018 CVS42_RS18840 07d76f29aa90851ca70a0c85674e3740 152 SUPERFAMILY SSF89447 2 132 1.36E-46 T 29-03-2018 CVS42_RS18840 07d76f29aa90851ca70a0c85674e3740 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 134 1.0E-54 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CVS42_RS18840 07d76f29aa90851ca70a0c85674e3740 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 133 7.0E-51 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CVS42_RS18840 07d76f29aa90851ca70a0c85674e3740 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 56.602 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CVS42_RS18840 07d76f29aa90851ca70a0c85674e3740 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 130 2.4E-19 T 29-03-2018 IPR020603 MraZ domain CVS42_RS18840 07d76f29aa90851ca70a0c85674e3740 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 1.0E-19 T 29-03-2018 IPR020603 MraZ domain CVS42_RS19790 0c091c84154d1bbc31bdab6036429de6 294 SUPERFAMILY SSF53850 101 252 1.41E-16 T 29-03-2018 CVS42_RS19790 0c091c84154d1bbc31bdab6036429de6 294 Gene3D G3DSA:3.40.190.10 146 267 3.4E-6 T 29-03-2018 CVS42_RS01455 126cc851b3b381b759639727f8a2af4a 286 Pfam PF06445 GyrI-like small molecule binding domain 140 271 8.9E-19 T 29-03-2018 IPR029442 GyrI-like small molecule binding domain CVS42_RS01455 126cc851b3b381b759639727f8a2af4a 286 SUPERFAMILY SSF55136 140 270 1.96E-26 T 29-03-2018 CVS42_RS01455 126cc851b3b381b759639727f8a2af4a 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 72 87 2.6E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS01455 126cc851b3b381b759639727f8a2af4a 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 87 103 2.6E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS01455 126cc851b3b381b759639727f8a2af4a 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 57 99 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CVS42_RS01455 126cc851b3b381b759639727f8a2af4a 286 SMART SM00871 136 285 1.9E-22 T 29-03-2018 IPR010499 Bacterial transcription activator, effector binding CVS42_RS01455 126cc851b3b381b759639727f8a2af4a 286 Gene3D G3DSA:1.10.10.60 3 57 4.8E-12 T 29-03-2018 CVS42_RS01455 126cc851b3b381b759639727f8a2af4a 286 Gene3D G3DSA:3.20.80.10 124 281 2.7E-17 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain CVS42_RS01455 126cc851b3b381b759639727f8a2af4a 286 SMART SM00342 20 103 3.2E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS01455 126cc851b3b381b759639727f8a2af4a 286 SUPERFAMILY SSF46689 5 52 9.86E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS01455 126cc851b3b381b759639727f8a2af4a 286 SUPERFAMILY SSF46689 56 106 2.24E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS01455 126cc851b3b381b759639727f8a2af4a 286 Pfam PF12833 Helix-turn-helix domain 26 104 8.8E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS01455 126cc851b3b381b759639727f8a2af4a 286 Gene3D G3DSA:1.10.10.60 58 118 1.5E-12 T 29-03-2018 CVS42_RS16065 7bd1ba5c1c11132565ae173642c48917 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 3.9E-39 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS16065 7bd1ba5c1c11132565ae173642c48917 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.9E-39 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS16065 7bd1ba5c1c11132565ae173642c48917 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.9E-39 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS16065 7bd1ba5c1c11132565ae173642c48917 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 3.9E-39 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS16065 7bd1ba5c1c11132565ae173642c48917 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.9E-39 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS16065 7bd1ba5c1c11132565ae173642c48917 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 3.9E-39 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS16065 7bd1ba5c1c11132565ae173642c48917 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 42.653 T 29-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS16065 7bd1ba5c1c11132565ae173642c48917 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 1.0E-111 T 29-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS16065 7bd1ba5c1c11132565ae173642c48917 242 SUPERFAMILY SSF52313 6 229 1.07E-99 T 29-03-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain CVS42_RS16065 7bd1ba5c1c11132565ae173642c48917 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 29-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CVS42_RS16065 7bd1ba5c1c11132565ae173642c48917 242 Gene3D G3DSA:3.40.50.10490 5 240 1.2E-99 T 29-03-2018 CVS42_RS16065 7bd1ba5c1c11132565ae173642c48917 242 Pfam PF00318 Ribosomal protein S2 9 224 3.8E-98 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS16065 7bd1ba5c1c11132565ae173642c48917 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 29-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CVS42_RS21995 72079477c20788b2425ae7908500868b 125 TIGRFAM TIGR00494 crcB: protein CrcB 7 120 4.2E-30 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CVS42_RS21995 72079477c20788b2425ae7908500868b 125 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 117 2.7E-24 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CVS42_RS21995 72079477c20788b2425ae7908500868b 125 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 122 19.355 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CVS42_RS21645 51926092415568a26d4c14fee4e4e869 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.9E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS21645 51926092415568a26d4c14fee4e4e869 297 SUPERFAMILY SSF53850 88 293 2.17E-36 T 29-03-2018 CVS42_RS21645 51926092415568a26d4c14fee4e4e869 297 Gene3D G3DSA:3.40.190.10 80 184 1.2E-22 T 29-03-2018 CVS42_RS21645 51926092415568a26d4c14fee4e4e869 297 Pfam PF03466 LysR substrate binding domain 87 292 4.0E-41 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS21645 51926092415568a26d4c14fee4e4e869 297 Gene3D G3DSA:3.40.190.10 185 264 1.5E-12 T 29-03-2018 CVS42_RS21645 51926092415568a26d4c14fee4e4e869 297 Gene3D G3DSA:1.10.10.10 1 79 1.0E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS21645 51926092415568a26d4c14fee4e4e869 297 SUPERFAMILY SSF46785 1 111 1.14E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS05700 d82b64bf7a703768076497c70331292c 468 Gene3D G3DSA:1.20.1250.20 21 227 1.3E-23 T 29-03-2018 CVS42_RS05700 d82b64bf7a703768076497c70331292c 468 PIRSF PIRSF002808 9 460 2.9E-100 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CVS42_RS05700 d82b64bf7a703768076497c70331292c 468 Gene3D G3DSA:1.20.1250.20 246 461 2.0E-16 T 29-03-2018 CVS42_RS05700 d82b64bf7a703768076497c70331292c 468 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 3.3E-134 T 29-03-2018 CVS42_RS05700 d82b64bf7a703768076497c70331292c 468 SUPERFAMILY SSF103473 19 450 1.96E-56 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS05700 d82b64bf7a703768076497c70331292c 468 Pfam PF07690 Major Facilitator Superfamily 35 390 1.8E-33 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS04575 d6b8297fbd29e6ec72f617a65d0a3483 402 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 10 398 5.1E-147 T 29-03-2018 IPR016633 Uncharacterised conserved protein UCP015557 CVS42_RS04575 d6b8297fbd29e6ec72f617a65d0a3483 402 PIRSF PIRSF015557 6 402 3.0E-145 T 29-03-2018 IPR016633 Uncharacterised conserved protein UCP015557 CVS42_RS04575 d6b8297fbd29e6ec72f617a65d0a3483 402 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 10 398 1.8E-143 T 29-03-2018 IPR016633 Uncharacterised conserved protein UCP015557 CVS42_RS05355 e324be559d12dc9ab392ee3af915ff13 208 PRINTS PR00354 7Fe ferredoxin signature 67 77 9.9E-5 T 29-03-2018 IPR000813 7Fe ferredoxin GO:0009055 CVS42_RS05355 e324be559d12dc9ab392ee3af915ff13 208 PRINTS PR00354 7Fe ferredoxin signature 84 101 9.9E-5 T 29-03-2018 IPR000813 7Fe ferredoxin GO:0009055 CVS42_RS05355 e324be559d12dc9ab392ee3af915ff13 208 PRINTS PR00354 7Fe ferredoxin signature 57 67 9.9E-5 T 29-03-2018 IPR000813 7Fe ferredoxin GO:0009055 CVS42_RS05355 e324be559d12dc9ab392ee3af915ff13 208 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS05355 e324be559d12dc9ab392ee3af915ff13 208 Gene3D G3DSA:3.30.70.20 2 71 1.4E-10 T 29-03-2018 CVS42_RS05355 e324be559d12dc9ab392ee3af915ff13 208 Gene3D G3DSA:3.30.70.20 114 201 4.7E-14 T 29-03-2018 CVS42_RS05355 e324be559d12dc9ab392ee3af915ff13 208 SUPERFAMILY SSF54862 1 182 9.73E-48 T 29-03-2018 CVS42_RS05355 e324be559d12dc9ab392ee3af915ff13 208 Gene3D G3DSA:3.30.70.20 72 113 1.5E-18 T 29-03-2018 CVS42_RS05355 e324be559d12dc9ab392ee3af915ff13 208 Pfam PF13247 4Fe-4S dicluster domain 54 166 4.2E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 SUPERFAMILY SSF53067 198 375 4.84E-47 T 29-03-2018 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 330 344 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 Gene3D G3DSA:3.30.420.40 18 206 4.9E-55 T 29-03-2018 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 613 1.0E-266 T 29-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 615 44.527 T 29-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 Pfam PF00012 Hsp70 protein 21 598 1.2E-185 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 SUPERFAMILY SSF100934 502 613 6.67E-31 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 SUPERFAMILY SSF53067 19 194 9.93E-51 T 29-03-2018 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 SUPERFAMILY SSF100920 383 534 4.97E-48 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 PRINTS PR00301 70kDa heat shock protein signature 358 378 6.4E-58 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 PRINTS PR00301 70kDa heat shock protein signature 20 33 6.4E-58 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 PRINTS PR00301 70kDa heat shock protein signature 464 480 6.4E-58 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 PRINTS PR00301 70kDa heat shock protein signature 150 170 6.4E-58 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 PRINTS PR00301 70kDa heat shock protein signature 70 78 6.4E-58 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 PRINTS PR00301 70kDa heat shock protein signature 48 60 6.4E-58 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 PRINTS PR00301 70kDa heat shock protein signature 209 219 6.4E-58 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 PRINTS PR00301 70kDa heat shock protein signature 383 402 6.4E-58 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 PRINTS PR00301 70kDa heat shock protein signature 327 343 6.4E-58 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 Gene3D G3DSA:2.60.34.10 385 526 4.5E-46 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 Gene3D G3DSA:3.30.420.40 207 355 9.0E-36 T 29-03-2018 CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 Gene3D G3DSA:1.20.1270.10 527 614 2.5E-10 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CVS42_RS07640 3c9a41e0fa67558feb6217c3b1276419 615 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 203 216 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CVS42_RS21065 ef37622c9ca03f9df629116a79878ec1 363 Gene3D G3DSA:3.10.350.10 28 81 6.4E-14 T 29-03-2018 CVS42_RS21065 ef37622c9ca03f9df629116a79878ec1 363 Pfam PF01476 LysM domain 34 80 3.1E-14 T 29-03-2018 IPR018392 LysM domain CVS42_RS21065 ef37622c9ca03f9df629116a79878ec1 363 SMART SM00257 33 81 0.001 T 29-03-2018 IPR018392 LysM domain CVS42_RS21065 ef37622c9ca03f9df629116a79878ec1 363 SUPERFAMILY SSF54106 33 80 1.44E-7 T 29-03-2018 IPR018392 LysM domain CVS42_RS07040 63dad3fc623d5949404b9b86d068b372 200 Gene3D G3DSA:3.40.30.10 3 161 2.1E-41 T 29-03-2018 CVS42_RS07040 63dad3fc623d5949404b9b86d068b372 200 Gene3D G3DSA:3.30.1020.10 162 198 3.5E-15 T 29-03-2018 CVS42_RS07040 63dad3fc623d5949404b9b86d068b372 200 SUPERFAMILY SSF52833 1 194 4.58E-70 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS07040 63dad3fc623d5949404b9b86d068b372 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 1.2E-12 T 29-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CVS42_RS07040 63dad3fc623d5949404b9b86d068b372 200 PIRSF PIRSF000239 1 199 3.0E-62 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CVS42_RS07040 63dad3fc623d5949404b9b86d068b372 200 Pfam PF00578 AhpC/TSA family 4 139 6.0E-36 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CVS42_RS12800 0027d78f9965d736bfe858b00d6ca11e 379 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CVS42_RS12800 0027d78f9965d736bfe858b00d6ca11e 379 SMART SM00382 122 247 0.0054 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS12800 0027d78f9965d736bfe858b00d6ca11e 379 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 2.3E-132 T 29-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 CVS42_RS12800 0027d78f9965d736bfe858b00d6ca11e 379 Pfam PF00437 Type II/IV secretion system protein 115 246 7.8E-37 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CVS42_RS12800 0027d78f9965d736bfe858b00d6ca11e 379 Gene3D G3DSA:3.30.450.90 1 99 4.2E-18 T 29-03-2018 CVS42_RS12800 0027d78f9965d736bfe858b00d6ca11e 379 SUPERFAMILY SSF52540 4 336 1.17E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS12800 0027d78f9965d736bfe858b00d6ca11e 379 Gene3D G3DSA:3.40.50.300 100 358 5.1E-37 T 29-03-2018 CVS42_RS20750 7732f67bbf9c032e9dcdf15c1cb38636 826 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 62 823 0.0 T 29-03-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 CVS42_RS20750 7732f67bbf9c032e9dcdf15c1cb38636 826 SUPERFAMILY SSF53706 63 683 6.02E-170 T 29-03-2018 CVS42_RS20750 7732f67bbf9c032e9dcdf15c1cb38636 826 Gene3D G3DSA:3.40.228.10 202 463 6.8E-60 T 29-03-2018 CVS42_RS20750 7732f67bbf9c032e9dcdf15c1cb38636 826 Gene3D G3DSA:3.40.228.10 464 523 8.7E-5 T 29-03-2018 CVS42_RS20750 7732f67bbf9c032e9dcdf15c1cb38636 826 Gene3D G3DSA:3.40.228.10 604 664 1.7E-8 T 29-03-2018 CVS42_RS20750 7732f67bbf9c032e9dcdf15c1cb38636 826 Gene3D G3DSA:3.90.55.10 532 603 9.8E-20 T 29-03-2018 CVS42_RS20750 7732f67bbf9c032e9dcdf15c1cb38636 826 Gene3D G3DSA:3.90.55.10 56 145 5.6E-17 T 29-03-2018 CVS42_RS20750 7732f67bbf9c032e9dcdf15c1cb38636 826 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 10 34 1.8E-5 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CVS42_RS20750 7732f67bbf9c032e9dcdf15c1cb38636 826 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 506 523 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CVS42_RS20750 7732f67bbf9c032e9dcdf15c1cb38636 826 Pfam PF01568 Molydopterin dinucleotide binding domain 683 798 3.0E-23 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CVS42_RS20750 7732f67bbf9c032e9dcdf15c1cb38636 826 SUPERFAMILY SSF50692 676 820 5.2E-39 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CVS42_RS20750 7732f67bbf9c032e9dcdf15c1cb38636 826 Pfam PF00384 Molybdopterin oxidoreductase 105 563 8.2E-93 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS20750 7732f67bbf9c032e9dcdf15c1cb38636 826 Gene3D G3DSA:2.40.40.20 665 819 3.4E-29 T 29-03-2018 CVS42_RS09835 6c9398bef2910687611a0f7bad74905d 336 PIRSF PIRSF000164 11 336 5.3E-97 T 29-03-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 CVS42_RS09835 6c9398bef2910687611a0f7bad74905d 336 Gene3D G3DSA:3.20.20.70 1 336 2.3E-81 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS09835 6c9398bef2910687611a0f7bad74905d 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 4.4E-89 T 29-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CVS42_RS09835 6c9398bef2910687611a0f7bad74905d 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 4.3E-145 T 29-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CVS42_RS09835 6c9398bef2910687611a0f7bad74905d 336 SUPERFAMILY SSF51395 1 335 4.4E-106 T 29-03-2018 CVS42_RS09835 6c9398bef2910687611a0f7bad74905d 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 29-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CVS42_RS09835 6c9398bef2910687611a0f7bad74905d 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 29-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CVS42_RS09835 6c9398bef2910687611a0f7bad74905d 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.374 T 29-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CVS42_RS20470 b3c6a0ed987b20cfbbd45c0f821e1539 417 SUPERFAMILY SSF56024 6 191 2.24E-38 T 29-03-2018 CVS42_RS20470 b3c6a0ed987b20cfbbd45c0f821e1539 417 Gene3D G3DSA:3.30.870.10 4 183 1.6E-27 T 29-03-2018 CVS42_RS20470 b3c6a0ed987b20cfbbd45c0f821e1539 417 SMART SM00155 113 140 8.8E-5 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CVS42_RS20470 b3c6a0ed987b20cfbbd45c0f821e1539 417 SMART SM00155 331 358 3.7 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CVS42_RS20470 b3c6a0ed987b20cfbbd45c0f821e1539 417 Gene3D G3DSA:3.30.870.10 251 401 1.1E-15 T 29-03-2018 CVS42_RS20470 b3c6a0ed987b20cfbbd45c0f821e1539 417 Pfam PF13091 PLD-like domain 21 172 5.5E-14 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CVS42_RS20470 b3c6a0ed987b20cfbbd45c0f821e1539 417 Pfam PF13091 PLD-like domain 265 383 9.1E-15 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CVS42_RS20470 b3c6a0ed987b20cfbbd45c0f821e1539 417 SUPERFAMILY SSF56024 222 393 3.36E-22 T 29-03-2018 CVS42_RS05030 4cb49bccf33062c577da6e57dfeaf1e9 225 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 1 218 39.727 T 29-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CVS42_RS05030 4cb49bccf33062c577da6e57dfeaf1e9 225 Gene3D G3DSA:3.40.470.10 2 222 4.6E-103 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CVS42_RS05030 4cb49bccf33062c577da6e57dfeaf1e9 225 Pfam PF03167 Uracil DNA glycosylase superfamily 51 206 1.4E-25 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CVS42_RS05030 4cb49bccf33062c577da6e57dfeaf1e9 225 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 54 63 - T 29-03-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CVS42_RS05030 4cb49bccf33062c577da6e57dfeaf1e9 225 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 3 211 1.6E-85 T 29-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CVS42_RS05030 4cb49bccf33062c577da6e57dfeaf1e9 225 SMART SM00986 46 207 8.7E-41 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CVS42_RS05030 4cb49bccf33062c577da6e57dfeaf1e9 225 SMART SM00987 46 207 8.7E-41 T 29-03-2018 CVS42_RS05030 4cb49bccf33062c577da6e57dfeaf1e9 225 SUPERFAMILY SSF52141 3 218 1.94E-94 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CVS42_RS08545 f9e1ea263887dcd98f222bd8b273517a 287 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 283 5.5E-113 T 29-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CVS42_RS08545 f9e1ea263887dcd98f222bd8b273517a 287 Pfam PF08543 Phosphomethylpyrimidine kinase 75 259 5.0E-17 T 29-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CVS42_RS08545 f9e1ea263887dcd98f222bd8b273517a 287 Gene3D G3DSA:3.40.1190.20 1 286 1.7E-58 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS08545 f9e1ea263887dcd98f222bd8b273517a 287 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 286 51.43 T 29-03-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 CVS42_RS08545 f9e1ea263887dcd98f222bd8b273517a 287 SUPERFAMILY SSF53613 1 280 9.2E-69 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS07055 b7f8c576c0546656adbe63de9a7424df 443 Pfam PF01490 Transmembrane amino acid transporter protein 28 440 8.4E-9 T 29-03-2018 IPR013057 Amino acid transporter, transmembrane domain CVS42_RS07055 b7f8c576c0546656adbe63de9a7424df 443 TIGRFAM TIGR00814 stp: serine transporter 17 433 1.3E-164 T 29-03-2018 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 CVS42_RS07055 b7f8c576c0546656adbe63de9a7424df 443 Hamap MF_01583 Threonine/serine transporter TdcC [tdcC]. 1 443 52.077 T 29-03-2018 IPR023726 Threonine/serine transporter TdcC GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 SUPERFAMILY SSF82714 183 265 6.28E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 SUPERFAMILY SSF82693 139 181 4.71E-21 T 29-03-2018 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 SUPERFAMILY SSF82693 268 324 4.71E-21 T 29-03-2018 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 Gene3D G3DSA:3.30.2090.10 180 266 1.1E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 SUPERFAMILY SSF82866 790 1009 1.57E-49 T 29-03-2018 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 SUPERFAMILY SSF82693 554 656 1.39E-17 T 29-03-2018 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.4E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 9.4E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 9.4E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 9.4E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.4E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 9.4E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 9.4E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 9.4E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 9.4E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 SUPERFAMILY SSF82866 291 491 3.27E-48 T 29-03-2018 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 SUPERFAMILY SSF82693 40 133 3.14E-26 T 29-03-2018 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 Gene3D G3DSA:3.30.70.1430 556 654 3.8E-16 T 29-03-2018 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 SUPERFAMILY SSF82714 703 787 4.97E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 Gene3D G3DSA:1.20.1640.10 788 1011 8.7E-44 T 29-03-2018 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 Gene3D G3DSA:1.20.1640.10 267 493 2.2E-46 T 29-03-2018 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 Pfam PF00873 AcrB/AcrD/AcrF family 4 1007 8.3E-285 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 Gene3D G3DSA:3.30.2090.10 702 787 5.4E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS15395 2d4afe430f6b0455e8b799ca513f1bc1 1038 Gene3D G3DSA:3.30.70.1430 40 141 2.0E-30 T 29-03-2018 CVS42_RS12920 3e15f3d40d6b85e1d7d5c2da6568d15e 230 Pfam PF01048 Phosphorylase superfamily 2 227 7.0E-46 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CVS42_RS12920 3e15f3d40d6b85e1d7d5c2da6568d15e 230 Gene3D G3DSA:3.40.50.1580 1 230 2.5E-50 T 29-03-2018 CVS42_RS12920 3e15f3d40d6b85e1d7d5c2da6568d15e 230 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 45.961 T 29-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CVS42_RS12920 3e15f3d40d6b85e1d7d5c2da6568d15e 230 SUPERFAMILY SSF53167 1 228 4.06E-68 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CVS42_RS12920 3e15f3d40d6b85e1d7d5c2da6568d15e 230 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 229 2.2E-92 T 29-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CVS42_RS01895 28380191ddadb53fd874ce421c269c08 269 Gene3D G3DSA:3.40.50.1000 1 269 3.2E-49 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS01895 28380191ddadb53fd874ce421c269c08 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 1.0E-62 T 29-03-2018 IPR000150 Cof family GO:0016787 CVS42_RS01895 28380191ddadb53fd874ce421c269c08 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 5.5E-67 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS01895 28380191ddadb53fd874ce421c269c08 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 2.0E-25 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CVS42_RS01895 28380191ddadb53fd874ce421c269c08 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 29-03-2018 CVS42_RS01895 28380191ddadb53fd874ce421c269c08 269 SUPERFAMILY SSF56784 1 267 1.31E-76 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS01895 28380191ddadb53fd874ce421c269c08 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 29-03-2018 CVS42_RS03715 c1d8391c1dbf201dc0446d98e3dca56d 599 Gene3D G3DSA:3.40.30.10 468 509 7.8E-7 T 29-03-2018 CVS42_RS03715 c1d8391c1dbf201dc0446d98e3dca56d 599 Gene3D G3DSA:2.60.40.1250 38 160 4.4E-36 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CVS42_RS03715 c1d8391c1dbf201dc0446d98e3dca56d 599 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 7 596 35.786 T 29-03-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 CVS42_RS03715 c1d8391c1dbf201dc0446d98e3dca56d 599 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 200 404 3.5E-16 T 29-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CVS42_RS03715 c1d8391c1dbf201dc0446d98e3dca56d 599 SUPERFAMILY SSF52833 476 588 4.09E-25 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS03715 c1d8391c1dbf201dc0446d98e3dca56d 599 Pfam PF13899 Thioredoxin-like 493 568 2.7E-12 T 29-03-2018 CVS42_RS03715 c1d8391c1dbf201dc0446d98e3dca56d 599 SUPERFAMILY SSF74863 43 155 4.71E-35 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CVS42_RS03715 c1d8391c1dbf201dc0446d98e3dca56d 599 Pfam PF11412 Disulphide bond corrector protein DsbC 45 155 5.3E-30 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CVS42_RS03715 c1d8391c1dbf201dc0446d98e3dca56d 599 Gene3D G3DSA:3.40.30.10 510 599 1.6E-11 T 29-03-2018 CVS42_RS03715 c1d8391c1dbf201dc0446d98e3dca56d 599 ProSitePatterns PS00194 Thioredoxin family active site. 504 522 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CVS42_RS17455 406bb6c988cec481ef952d0b6610a1b8 211 Pfam PF13460 NAD(P)H-binding 8 193 3.9E-41 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS17455 406bb6c988cec481ef952d0b6610a1b8 211 SUPERFAMILY SSF51735 2 206 8.36E-38 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS17455 406bb6c988cec481ef952d0b6610a1b8 211 Gene3D G3DSA:3.40.50.720 1 204 1.6E-29 T 29-03-2018 CVS42_RS19740 f54ce3b11106c77acddd56016f72ab24 874 Gene3D G3DSA:3.30.980.10 552 712 2.0E-46 T 29-03-2018 CVS42_RS19740 f54ce3b11106c77acddd56016f72ab24 874 Gene3D G3DSA:3.30.930.10 2 250 3.6E-117 T 29-03-2018 CVS42_RS19740 f54ce3b11106c77acddd56016f72ab24 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 197.862 T 29-03-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CVS42_RS19740 f54ce3b11106c77acddd56016f72ab24 874 SUPERFAMILY SSF55186 551 707 2.22E-51 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CVS42_RS19740 f54ce3b11106c77acddd56016f72ab24 874 Pfam PF01411 tRNA synthetases class II (A) 7 555 3.7E-221 T 29-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CVS42_RS19740 f54ce3b11106c77acddd56016f72ab24 874 SMART SM00863 652 695 5.9E-23 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CVS42_RS19740 f54ce3b11106c77acddd56016f72ab24 874 SUPERFAMILY SSF55681 3 253 6.46E-108 T 29-03-2018 CVS42_RS19740 f54ce3b11106c77acddd56016f72ab24 874 SUPERFAMILY SSF101353 254 462 1.57E-56 T 29-03-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 CVS42_RS19740 f54ce3b11106c77acddd56016f72ab24 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 304 317 1.5E-32 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CVS42_RS19740 f54ce3b11106c77acddd56016f72ab24 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 1.5E-32 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CVS42_RS19740 f54ce3b11106c77acddd56016f72ab24 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.5E-32 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CVS42_RS19740 f54ce3b11106c77acddd56016f72ab24 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 1.5E-32 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CVS42_RS19740 f54ce3b11106c77acddd56016f72ab24 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 280 296 1.5E-32 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CVS42_RS19740 f54ce3b11106c77acddd56016f72ab24 874 SUPERFAMILY SSF50447 454 551 3.5E-18 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CVS42_RS19740 f54ce3b11106c77acddd56016f72ab24 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 1.1E-18 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CVS42_RS19740 f54ce3b11106c77acddd56016f72ab24 874 Pfam PF02272 DHHA1 domain 731 870 8.2E-30 T 29-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CVS42_RS19740 f54ce3b11106c77acddd56016f72ab24 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 853 0.0 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CVS42_RS06715 8c4466f8eb66d4f5f907965544a90e78 361 SUPERFAMILY SSF47384 117 199 1.37E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS06715 8c4466f8eb66d4f5f907965544a90e78 361 Pfam PF00672 HAMP domain 79 129 1.6E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS06715 8c4466f8eb66d4f5f907965544a90e78 361 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 247 351 5.0E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06715 8c4466f8eb66d4f5f907965544a90e78 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 307 6.0E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS06715 8c4466f8eb66d4f5f907965544a90e78 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 351 6.0E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS06715 8c4466f8eb66d4f5f907965544a90e78 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 6.0E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS06715 8c4466f8eb66d4f5f907965544a90e78 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 314 332 6.0E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS06715 8c4466f8eb66d4f5f907965544a90e78 361 Gene3D G3DSA:3.30.565.10 180 353 5.1E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06715 8c4466f8eb66d4f5f907965544a90e78 361 SUPERFAMILY SSF55874 187 352 8.25E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06715 8c4466f8eb66d4f5f907965544a90e78 361 SMART SM00304 79 133 3.0E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS06715 8c4466f8eb66d4f5f907965544a90e78 361 SMART SM00387 243 354 2.7E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06715 8c4466f8eb66d4f5f907965544a90e78 361 SMART SM00388 134 198 3.4E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS06715 8c4466f8eb66d4f5f907965544a90e78 361 SUPERFAMILY SSF158472 79 131 6.54E-7 T 29-03-2018 CVS42_RS06715 8c4466f8eb66d4f5f907965544a90e78 361 Pfam PF00512 His Kinase A (phospho-acceptor) domain 139 198 1.7E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS06715 8c4466f8eb66d4f5f907965544a90e78 361 Gene3D G3DSA:1.10.287.130 124 179 1.1E-10 T 29-03-2018 CVS42_RS13175 15442b9254829ad214222c43991213aa 1653 SMART SM01359 760 915 2.2E-28 T 29-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CVS42_RS13175 15442b9254829ad214222c43991213aa 1653 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 302 395 1.3E-22 T 29-03-2018 CVS42_RS13175 15442b9254829ad214222c43991213aa 1653 Pfam PF01835 MG2 domain 401 493 1.2E-16 T 29-03-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 CVS42_RS13175 15442b9254829ad214222c43991213aa 1653 Gene3D G3DSA:1.50.10.20 1168 1447 2.8E-21 T 29-03-2018 CVS42_RS13175 15442b9254829ad214222c43991213aa 1653 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 761 915 1.9E-8 T 29-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CVS42_RS13175 15442b9254829ad214222c43991213aa 1653 PIRSF PIRSF038980 65 1652 0.0 T 29-03-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria CVS42_RS13175 15442b9254829ad214222c43991213aa 1653 SMART SM01360 977 1066 1.1E-20 T 29-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 CVS42_RS13175 15442b9254829ad214222c43991213aa 1653 SUPERFAMILY SSF48239 1181 1434 1.06E-31 T 29-03-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CVS42_RS13175 15442b9254829ad214222c43991213aa 1653 Pfam PF00207 Alpha-2-macroglobulin family 978 1063 9.7E-7 T 29-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 CVS42_RS11560 7aac4d146e0c7f1b9aa2036114da370c 531 SMART SM00283 269 530 7.4E-60 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS11560 7aac4d146e0c7f1b9aa2036114da370c 531 Pfam PF00672 HAMP domain 201 248 7.7E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS11560 7aac4d146e0c7f1b9aa2036114da370c 531 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 496 5.1E-41 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS11560 7aac4d146e0c7f1b9aa2036114da370c 531 SUPERFAMILY SSF58104 222 530 2.22E-66 T 29-03-2018 CVS42_RS11560 7aac4d146e0c7f1b9aa2036114da370c 531 SMART SM00304 201 254 1.0E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS11560 7aac4d146e0c7f1b9aa2036114da370c 531 Gene3D G3DSA:1.10.287.950 41 297 1.6E-9 T 29-03-2018 CVS42_RS11560 7aac4d146e0c7f1b9aa2036114da370c 531 Gene3D G3DSA:1.10.287.950 298 502 2.1E-45 T 29-03-2018 CVS42_RS11560 7aac4d146e0c7f1b9aa2036114da370c 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 4.6E-6 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS11560 7aac4d146e0c7f1b9aa2036114da370c 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 4.6E-6 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS03655 1a81c7680fb9020c4acf2c28a451fadb 201 Pfam PF08239 Bacterial SH3 domain 30 80 7.0E-8 T 29-03-2018 IPR003646 SH3-like domain, bacterial-type CVS42_RS03655 1a81c7680fb9020c4acf2c28a451fadb 201 Gene3D G3DSA:2.30.30.410 13 77 2.4E-7 T 29-03-2018 CVS42_RS03655 1a81c7680fb9020c4acf2c28a451fadb 201 SMART SM00287 18 83 6.8E-6 T 29-03-2018 IPR003646 SH3-like domain, bacterial-type CVS42_RS03655 1a81c7680fb9020c4acf2c28a451fadb 201 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 22 199 5.6E-54 T 29-03-2018 IPR016476 SH3 domain protein CVS42_RS03655 1a81c7680fb9020c4acf2c28a451fadb 201 Gene3D G3DSA:1.20.5.50 78 160 8.9E-8 T 29-03-2018 CVS42_RS03655 1a81c7680fb9020c4acf2c28a451fadb 201 PIRSF PIRSF006158 2 200 1.1E-55 T 29-03-2018 IPR016476 SH3 domain protein CVS42_RS04505 27edd324840e31c66732787108746320 294 Pfam PF03471 Transporter associated domain 207 282 1.4E-20 T 29-03-2018 IPR005170 Transporter-associated domain CVS42_RS04505 27edd324840e31c66732787108746320 294 SMART SM01091 206 284 3.2E-28 T 29-03-2018 IPR005170 Transporter-associated domain CVS42_RS04505 27edd324840e31c66732787108746320 294 Gene3D G3DSA:3.10.580.10 46 198 6.0E-35 T 29-03-2018 CVS42_RS04505 27edd324840e31c66732787108746320 294 Pfam PF00571 CBS domain 65 119 8.9E-7 T 29-03-2018 IPR000644 CBS domain CVS42_RS04505 27edd324840e31c66732787108746320 294 Pfam PF00571 CBS domain 139 188 3.4E-6 T 29-03-2018 IPR000644 CBS domain CVS42_RS04505 27edd324840e31c66732787108746320 294 Gene3D G3DSA:3.30.465.10 199 282 1.2E-24 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CVS42_RS04505 27edd324840e31c66732787108746320 294 SUPERFAMILY SSF54631 62 201 1.01E-33 T 29-03-2018 CVS42_RS04505 27edd324840e31c66732787108746320 294 SUPERFAMILY SSF56176 204 288 2.45E-22 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CVS42_RS04505 27edd324840e31c66732787108746320 294 SMART SM00116 74 123 6.1 T 29-03-2018 IPR000644 CBS domain CVS42_RS04505 27edd324840e31c66732787108746320 294 SMART SM00116 140 188 0.028 T 29-03-2018 IPR000644 CBS domain CVS42_RS04470 8667370c2bcf2a2e06c5bd8e4a7e3023 299 Pfam PF00589 Phage integrase family 115 285 9.9E-54 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS04470 8667370c2bcf2a2e06c5bd8e4a7e3023 299 SUPERFAMILY SSF47823 6 102 2.75E-36 T 29-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CVS42_RS04470 8667370c2bcf2a2e06c5bd8e4a7e3023 299 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 6 299 63.617 T 29-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CVS42_RS04470 8667370c2bcf2a2e06c5bd8e4a7e3023 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 299 57.648 T 29-03-2018 IPR023009 Tyrosine recombinase XerC/XerD CVS42_RS04470 8667370c2bcf2a2e06c5bd8e4a7e3023 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 10 92 5.2E-23 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CVS42_RS04470 8667370c2bcf2a2e06c5bd8e4a7e3023 299 Gene3D G3DSA:1.10.150.130 6 110 5.7E-22 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CVS42_RS04470 8667370c2bcf2a2e06c5bd8e4a7e3023 299 SUPERFAMILY SSF56349 108 296 1.77E-57 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CVS42_RS04470 8667370c2bcf2a2e06c5bd8e4a7e3023 299 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 12 299 5.3E-119 T 29-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CVS42_RS04470 8667370c2bcf2a2e06c5bd8e4a7e3023 299 Gene3D G3DSA:1.10.443.10 113 292 1.6E-49 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS12350 6405e5fae55409049e5b23bfa51eeded 224 Pfam PF00072 Response regulator receiver domain 4 112 6.9E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS12350 6405e5fae55409049e5b23bfa51eeded 224 Gene3D G3DSA:3.40.50.2300 1 119 9.5E-33 T 29-03-2018 CVS42_RS12350 6405e5fae55409049e5b23bfa51eeded 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.3E-17 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS12350 6405e5fae55409049e5b23bfa51eeded 224 SUPERFAMILY SSF46894 118 217 2.01E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS12350 6405e5fae55409049e5b23bfa51eeded 224 SMART SM00448 1 112 4.6E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS12350 6405e5fae55409049e5b23bfa51eeded 224 SMART SM00862 143 216 7.8E-17 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS12350 6405e5fae55409049e5b23bfa51eeded 224 Gene3D G3DSA:1.10.10.10 120 223 4.6E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS12350 6405e5fae55409049e5b23bfa51eeded 224 SUPERFAMILY SSF52172 1 120 2.28E-35 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS15580 d07ab19ddab96fee7d47fbf758ea9e68 231 SMART SM00448 4 117 5.5E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS15580 d07ab19ddab96fee7d47fbf758ea9e68 231 Gene3D G3DSA:3.40.50.2300 4 144 3.3E-23 T 29-03-2018 CVS42_RS15580 d07ab19ddab96fee7d47fbf758ea9e68 231 SUPERFAMILY SSF52172 3 132 2.13E-26 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS15580 d07ab19ddab96fee7d47fbf758ea9e68 231 Pfam PF00072 Response regulator receiver domain 7 116 9.8E-17 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS15580 d07ab19ddab96fee7d47fbf758ea9e68 231 PIRSF PIRSF006171 2 230 5.7E-63 T 29-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 CVS42_RS15580 d07ab19ddab96fee7d47fbf758ea9e68 231 Gene3D G3DSA:1.10.10.10 160 231 8.9E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS13465 fe54443f6f57439835717530298c6d97 183 Pfam PF14437 MafB19-like deaminase 19 165 2.7E-32 T 29-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CVS42_RS13465 fe54443f6f57439835717530298c6d97 183 Gene3D G3DSA:3.40.140.10 11 174 4.8E-54 T 29-03-2018 CVS42_RS13465 fe54443f6f57439835717530298c6d97 183 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 24 165 45.849 T 29-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CVS42_RS13465 fe54443f6f57439835717530298c6d97 183 SUPERFAMILY SSF53927 16 169 5.19E-58 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CVS42_RS13465 fe54443f6f57439835717530298c6d97 183 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 69 106 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CVS42_RS18280 5e7087282dc6109dec694156ec08be19 245 Gene3D G3DSA:3.40.190.10 13 164 3.3E-37 T 29-03-2018 CVS42_RS18280 5e7087282dc6109dec694156ec08be19 245 SMART SM00062 22 244 2.0E-75 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS18280 5e7087282dc6109dec694156ec08be19 245 Gene3D G3DSA:3.40.190.10 165 245 1.3E-16 T 29-03-2018 CVS42_RS18280 5e7087282dc6109dec694156ec08be19 245 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CVS42_RS18280 5e7087282dc6109dec694156ec08be19 245 SUPERFAMILY SSF53850 1 244 9.72E-66 T 29-03-2018 CVS42_RS18280 5e7087282dc6109dec694156ec08be19 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 244 1.1E-64 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS15835 a4f3ac6d0107056d1da8cd07b297eb10 556 Gene3D G3DSA:3.40.50.1220 186 350 1.8E-26 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CVS42_RS15835 a4f3ac6d0107056d1da8cd07b297eb10 556 SUPERFAMILY SSF52518 9 181 1.36E-46 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS15835 a4f3ac6d0107056d1da8cd07b297eb10 556 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 173 1.0E-47 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CVS42_RS15835 a4f3ac6d0107056d1da8cd07b297eb10 556 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 9 547 7.9E-248 T 29-03-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CVS42_RS15835 a4f3ac6d0107056d1da8cd07b297eb10 556 SUPERFAMILY SSF52518 366 547 1.38E-53 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS15835 a4f3ac6d0107056d1da8cd07b297eb10 556 Gene3D G3DSA:3.40.50.970 351 555 1.7E-39 T 29-03-2018 CVS42_RS15835 a4f3ac6d0107056d1da8cd07b297eb10 556 SUPERFAMILY SSF52467 186 356 1.39E-33 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CVS42_RS15835 a4f3ac6d0107056d1da8cd07b297eb10 556 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 327 6.0E-24 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CVS42_RS15835 a4f3ac6d0107056d1da8cd07b297eb10 556 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 535 2.2E-39 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CVS42_RS15835 a4f3ac6d0107056d1da8cd07b297eb10 556 Gene3D G3DSA:3.40.50.970 7 185 6.3E-44 T 29-03-2018 CVS42_RS15835 a4f3ac6d0107056d1da8cd07b297eb10 556 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CVS42_RS10795 dcc6187f1ebef282b80bbabef5197d02 333 Pfam PF00534 Glycosyl transferases group 1 167 312 9.0E-23 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CVS42_RS10795 dcc6187f1ebef282b80bbabef5197d02 333 Gene3D G3DSA:3.40.50.2000 170 316 1.2E-32 T 29-03-2018 CVS42_RS10795 dcc6187f1ebef282b80bbabef5197d02 333 Pfam PF13439 Glycosyltransferase Family 4 16 155 3.6E-14 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CVS42_RS10795 dcc6187f1ebef282b80bbabef5197d02 333 Gene3D G3DSA:3.40.50.2000 14 169 3.9E-11 T 29-03-2018 CVS42_RS10795 dcc6187f1ebef282b80bbabef5197d02 333 SUPERFAMILY SSF53756 14 331 8.52E-58 T 29-03-2018 CVS42_RS18320 7f045fd01fa1063fe47418418945e854 138 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CVS42_RS18320 7f045fd01fa1063fe47418418945e854 138 Gene3D G3DSA:3.30.160.20 1 138 1.0E-35 T 29-03-2018 CVS42_RS18320 7f045fd01fa1063fe47418418945e854 138 Pfam PF00472 RF-1 domain 7 132 1.3E-24 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CVS42_RS18320 7f045fd01fa1063fe47418418945e854 138 SUPERFAMILY SSF75620 7 113 2.16E-15 T 29-03-2018 CVS42_RS15030 e742e10dfbe2da4bf2c72001447315ee 522 SUPERFAMILY SSF52540 5 261 2.72E-38 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS15030 e742e10dfbe2da4bf2c72001447315ee 522 Pfam PF01471 Putative peptidoglycan binding domain 454 504 1.2E-8 T 29-03-2018 IPR002477 Peptidoglycan binding-like CVS42_RS15030 e742e10dfbe2da4bf2c72001447315ee 522 SMART SM00382 42 186 1.1E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS15030 e742e10dfbe2da4bf2c72001447315ee 522 Gene3D G3DSA:3.90.70.10 324 443 1.9E-11 T 29-03-2018 CVS42_RS15030 e742e10dfbe2da4bf2c72001447315ee 522 SUPERFAMILY SSF47090 449 515 7.06E-10 T 29-03-2018 IPR002477 Peptidoglycan binding-like CVS42_RS15030 e742e10dfbe2da4bf2c72001447315ee 522 Pfam PF13401 AAA domain 42 171 4.1E-24 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS15030 e742e10dfbe2da4bf2c72001447315ee 522 Gene3D G3DSA:3.40.50.300 18 194 4.5E-15 T 29-03-2018 CVS42_RS15030 e742e10dfbe2da4bf2c72001447315ee 522 Gene3D G3DSA:1.10.101.10 444 513 4.3E-8 T 29-03-2018 IPR002477 Peptidoglycan binding-like CVS42_RS11985 bd06cda22917fb034e197967a840806c 96 SUPERFAMILY SSF54928 3 94 1.88E-31 T 29-03-2018 IPR000504 RNA recognition motif domain GO:0003676 CVS42_RS11985 bd06cda22917fb034e197967a840806c 96 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6 76 7.5E-24 T 29-03-2018 IPR000504 RNA recognition motif domain GO:0003676 CVS42_RS11985 bd06cda22917fb034e197967a840806c 96 Gene3D G3DSA:3.30.70.330 1 96 6.3E-30 T 29-03-2018 CVS42_RS11985 bd06cda22917fb034e197967a840806c 96 SMART SM00360 5 78 2.0E-28 T 29-03-2018 IPR000504 RNA recognition motif domain GO:0003676 CVS42_RS03335 f8cde310f28f3d596a1e4c3c69cd4197 121 Pfam PF09834 Predicted membrane protein (DUF2061) 1 51 1.0E-19 T 29-03-2018 IPR018638 Domain of unknown function DUF2061, membrane CVS42_RS03335 f8cde310f28f3d596a1e4c3c69cd4197 121 Pfam PF09834 Predicted membrane protein (DUF2061) 62 111 2.4E-20 T 29-03-2018 IPR018638 Domain of unknown function DUF2061, membrane CVS42_RS04440 bef574956a8390f2bdfda483c6b93eb0 160 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 6 160 22.066 T 29-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CVS42_RS04440 bef574956a8390f2bdfda483c6b93eb0 160 Gene3D G3DSA:3.30.160.150 21 160 2.9E-33 T 29-03-2018 CVS42_RS04440 bef574956a8390f2bdfda483c6b93eb0 160 Pfam PF04390 Lipopolysaccharide-assembly 44 155 4.5E-7 T 29-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CVS42_RS08290 fbad5b0052d7d215197b65bb0b51fbca 297 Gene3D G3DSA:1.10.3720.10 20 286 1.2E-34 T 29-03-2018 CVS42_RS08290 fbad5b0052d7d215197b65bb0b51fbca 297 SUPERFAMILY SSF161098 91 277 4.06E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS08290 fbad5b0052d7d215197b65bb0b51fbca 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 292 1.0E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS08290 fbad5b0052d7d215197b65bb0b51fbca 297 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 15 67 1.2E-11 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CVS42_RS12550 08f7ae3aa750e1bb26812715ac124605 392 SUPERFAMILY SSF103473 3 379 1.7E-63 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS12550 08f7ae3aa750e1bb26812715ac124605 392 PRINTS PR01035 Tetracycline resistance protein signature 158 178 7.0E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CVS42_RS12550 08f7ae3aa750e1bb26812715ac124605 392 PRINTS PR01035 Tetracycline resistance protein signature 40 59 7.0E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CVS42_RS12550 08f7ae3aa750e1bb26812715ac124605 392 PRINTS PR01035 Tetracycline resistance protein signature 10 26 7.0E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CVS42_RS12550 08f7ae3aa750e1bb26812715ac124605 392 PRINTS PR01035 Tetracycline resistance protein signature 98 119 7.0E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CVS42_RS12550 08f7ae3aa750e1bb26812715ac124605 392 Pfam PF07690 Major Facilitator Superfamily 9 319 4.6E-43 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS12550 08f7ae3aa750e1bb26812715ac124605 392 Gene3D G3DSA:1.20.1250.20 191 383 1.9E-23 T 29-03-2018 CVS42_RS12550 08f7ae3aa750e1bb26812715ac124605 392 Gene3D G3DSA:1.20.1250.20 3 190 6.4E-27 T 29-03-2018 CVS42_RS14440 10e9da77590cbf90c6946813f923fa35 368 SUPERFAMILY SSF53756 1 364 4.24E-128 T 29-03-2018 CVS42_RS14440 10e9da77590cbf90c6946813f923fa35 368 Gene3D G3DSA:3.40.50.2000 2 200 2.1E-69 T 29-03-2018 CVS42_RS14440 10e9da77590cbf90c6946813f923fa35 368 Gene3D G3DSA:3.40.50.2000 201 340 1.4E-42 T 29-03-2018 CVS42_RS14440 10e9da77590cbf90c6946813f923fa35 368 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 362 5.3E-146 T 29-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 CVS42_RS14440 10e9da77590cbf90c6946813f923fa35 368 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 360 4.1E-111 T 29-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 CVS42_RS20340 f1d015e0cbd25507d9633b884fd7fefe 652 SUPERFAMILY SSF55073 237 393 2.04E-14 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS20340 f1d015e0cbd25507d9633b884fd7fefe 652 Gene3D G3DSA:3.20.20.450 399 646 1.5E-48 T 29-03-2018 IPR001633 EAL domain CVS42_RS20340 f1d015e0cbd25507d9633b884fd7fefe 652 Gene3D G3DSA:3.30.70.270 226 398 5.3E-22 T 29-03-2018 CVS42_RS20340 f1d015e0cbd25507d9633b884fd7fefe 652 SMART SM00267 221 391 5.6E-11 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS20340 f1d015e0cbd25507d9633b884fd7fefe 652 SUPERFAMILY SSF141868 411 643 7.98E-47 T 29-03-2018 IPR001633 EAL domain CVS42_RS20340 f1d015e0cbd25507d9633b884fd7fefe 652 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 44 137 6.9E-20 T 29-03-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 CVS42_RS20340 f1d015e0cbd25507d9633b884fd7fefe 652 Pfam PF00990 Diguanylate cyclase, GGDEF domain 232 386 4.8E-18 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS20340 f1d015e0cbd25507d9633b884fd7fefe 652 Pfam PF00563 EAL domain 412 642 2.0E-47 T 29-03-2018 IPR001633 EAL domain CVS42_RS20340 f1d015e0cbd25507d9633b884fd7fefe 652 SMART SM00052 403 647 2.8E-25 T 29-03-2018 IPR001633 EAL domain CVS42_RS20340 f1d015e0cbd25507d9633b884fd7fefe 652 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 230 389 1.4E-11 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 Gene3D G3DSA:3.40.50.720 169 336 4.4E-27 T 29-03-2018 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.1E-70 T 29-03-2018 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.1E-70 T 29-03-2018 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.1E-70 T 29-03-2018 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.1E-70 T 29-03-2018 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.1E-70 T 29-03-2018 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.1E-70 T 29-03-2018 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.1E-70 T 29-03-2018 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.1E-70 T 29-03-2018 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.1E-70 T 29-03-2018 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 Gene3D G3DSA:3.50.50.60 1 168 8.4E-27 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 SUPERFAMILY SSF51905 3 338 2.66E-57 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 SUPERFAMILY SSF55424 345 461 8.08E-39 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 460 4.2E-148 T 29-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 PIRSF PIRSF000350 1 469 5.3E-85 T 29-03-2018 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.3E-63 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 1.3E-34 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 Gene3D G3DSA:3.30.390.30 337 462 4.9E-38 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 9.9E-41 T 29-03-2018 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 9.9E-41 T 29-03-2018 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 9.9E-41 T 29-03-2018 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 9.9E-41 T 29-03-2018 CVS42_RS18680 1a332425d0eb9acd9d1e782de3b026c4 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 9.9E-41 T 29-03-2018 CVS42_RS01060 21e3c38af1cf065cdd5f51e94694be73 436 SMART SM00304 170 222 6.7E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS01060 21e3c38af1cf065cdd5f51e94694be73 436 Gene3D G3DSA:1.10.287.130 200 279 6.9E-11 T 29-03-2018 CVS42_RS01060 21e3c38af1cf065cdd5f51e94694be73 436 SUPERFAMILY SSF158472 170 221 3.14E-5 T 29-03-2018 CVS42_RS01060 21e3c38af1cf065cdd5f51e94694be73 436 SMART SM00387 322 430 1.0E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS01060 21e3c38af1cf065cdd5f51e94694be73 436 SMART SM00388 223 283 1.3E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS01060 21e3c38af1cf065cdd5f51e94694be73 436 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 282 1.1E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS01060 21e3c38af1cf065cdd5f51e94694be73 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 8.4E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS01060 21e3c38af1cf065cdd5f51e94694be73 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 8.4E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS01060 21e3c38af1cf065cdd5f51e94694be73 436 Gene3D G3DSA:3.30.565.10 284 435 2.9E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS01060 21e3c38af1cf065cdd5f51e94694be73 436 SUPERFAMILY SSF47384 206 283 3.34E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS01060 21e3c38af1cf065cdd5f51e94694be73 436 Pfam PF00672 HAMP domain 170 217 9.7E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS01060 21e3c38af1cf065cdd5f51e94694be73 436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 428 2.3E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS01060 21e3c38af1cf065cdd5f51e94694be73 436 SUPERFAMILY SSF55874 284 430 4.45E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS03000 5cdfae7ee32f903a3e7ec02d5c8652ed 701 Pfam PF02743 Cache domain 47 300 1.6E-15 T 29-03-2018 IPR033479 Double Cache domain 1 CVS42_RS03000 5cdfae7ee32f903a3e7ec02d5c8652ed 701 Gene3D G3DSA:3.30.450.20 77 224 2.2E-18 T 29-03-2018 CVS42_RS03000 5cdfae7ee32f903a3e7ec02d5c8652ed 701 Gene3D G3DSA:3.30.450.20 225 338 4.1E-9 T 29-03-2018 CVS42_RS03000 5cdfae7ee32f903a3e7ec02d5c8652ed 701 SMART SM00283 439 700 2.0E-60 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS03000 5cdfae7ee32f903a3e7ec02d5c8652ed 701 SUPERFAMILY SSF58104 392 700 7.06E-66 T 29-03-2018 CVS42_RS03000 5cdfae7ee32f903a3e7ec02d5c8652ed 701 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 496 665 1.7E-43 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS03000 5cdfae7ee32f903a3e7ec02d5c8652ed 701 SMART SM00304 370 424 1.5E-5 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS03000 5cdfae7ee32f903a3e7ec02d5c8652ed 701 Gene3D G3DSA:1.10.287.950 368 463 0.23 T 29-03-2018 CVS42_RS03000 5cdfae7ee32f903a3e7ec02d5c8652ed 701 Gene3D G3DSA:1.10.287.950 464 663 5.4E-48 T 29-03-2018 CVS42_RS05565 04155fe70ce754162e630bb2fc182b5a 371 SUPERFAMILY SSF52172 3 109 1.28E-26 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS05565 04155fe70ce754162e630bb2fc182b5a 371 Gene3D G3DSA:3.40.50.2300 2 176 4.3E-29 T 29-03-2018 CVS42_RS05565 04155fe70ce754162e630bb2fc182b5a 371 Gene3D G3DSA:3.40.50.180 177 369 6.4E-73 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CVS42_RS05565 04155fe70ce754162e630bb2fc182b5a 371 SUPERFAMILY SSF52738 181 366 7.32E-65 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CVS42_RS05565 04155fe70ce754162e630bb2fc182b5a 371 PIRSF PIRSF000876 1 371 2.1E-129 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CVS42_RS05565 04155fe70ce754162e630bb2fc182b5a 371 Pfam PF01339 CheB methylesterase 186 365 3.3E-60 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CVS42_RS05565 04155fe70ce754162e630bb2fc182b5a 371 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 370 39.246 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CVS42_RS05565 04155fe70ce754162e630bb2fc182b5a 371 SMART SM00448 3 126 2.1E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS05565 04155fe70ce754162e630bb2fc182b5a 371 Pfam PF00072 Response regulator receiver domain 5 109 3.1E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06570 052414b59d3421dfd1ef415d949f9494 127 Gene3D G3DSA:3.30.1330.40 1 127 6.1E-44 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CVS42_RS06570 052414b59d3421dfd1ef415d949f9494 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 123 5.5E-46 T 29-03-2018 IPR006056 RidA family CVS42_RS06570 052414b59d3421dfd1ef415d949f9494 127 SUPERFAMILY SSF55298 1 125 3.14E-42 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CVS42_RS06570 052414b59d3421dfd1ef415d949f9494 127 Pfam PF01042 Endoribonuclease L-PSP 9 124 4.3E-39 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CVS42_RS01605 17f8fdacee12286a323a4f3b8a67b1d9 359 Pfam PF05125 Phage major capsid protein, P2 family 13 334 2.6E-104 T 29-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 CVS42_RS01605 17f8fdacee12286a323a4f3b8a67b1d9 359 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 15 329 6.4E-102 T 29-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 CVS42_RS16030 85142ae1c3859c1c39d0d1dcf5d39981 450 SMART SM00228 116 186 0.14 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS16030 85142ae1c3859c1c39d0d1dcf5d39981 450 SMART SM00228 211 280 6.5E-10 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS16030 85142ae1c3859c1c39d0d1dcf5d39981 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 450 8.2E-141 T 29-03-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 CVS42_RS16030 85142ae1c3859c1c39d0d1dcf5d39981 450 Gene3D G3DSA:2.30.42.10 28 198 3.0E-11 T 29-03-2018 CVS42_RS16030 85142ae1c3859c1c39d0d1dcf5d39981 450 Gene3D G3DSA:2.30.42.10 222 309 1.7E-19 T 29-03-2018 CVS42_RS16030 85142ae1c3859c1c39d0d1dcf5d39981 450 Pfam PF02163 Peptidase family M50 10 438 3.0E-86 T 29-03-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889|Reactome: R-MMU-8963889 CVS42_RS16030 85142ae1c3859c1c39d0d1dcf5d39981 450 Pfam PF13180 PDZ domain 223 287 1.2E-6 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS16030 85142ae1c3859c1c39d0d1dcf5d39981 450 SUPERFAMILY SSF50156 195 290 1.71E-17 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS16030 85142ae1c3859c1c39d0d1dcf5d39981 450 SUPERFAMILY SSF50156 89 188 2.1E-12 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS08560 6e507eadaf4500d0d830d09bf87a3d6e 130 SUPERFAMILY SSF55811 7 120 1.31E-19 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CVS42_RS08560 6e507eadaf4500d0d830d09bf87a3d6e 130 Gene3D G3DSA:3.90.79.10 5 125 1.9E-16 T 29-03-2018 CVS42_RS08560 6e507eadaf4500d0d830d09bf87a3d6e 130 Pfam PF00293 NUDIX domain 13 113 9.6E-12 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CVS42_RS07805 da0cd004c5272936c2454332077f7188 280 SUPERFAMILY SSF52151 9 233 3.66E-35 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CVS42_RS07805 da0cd004c5272936c2454332077f7188 280 Gene3D G3DSA:3.40.1090.10 2 200 1.9E-24 T 29-03-2018 CVS42_RS07805 da0cd004c5272936c2454332077f7188 280 Pfam PF01734 Patatin-like phospholipase 10 175 2.6E-10 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CVS42_RS07785 99c3e7f7b74e8a47b1099bd958d54757 463 Gene3D G3DSA:3.40.50.720 3 120 1.2E-17 T 29-03-2018 CVS42_RS07785 99c3e7f7b74e8a47b1099bd958d54757 463 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 1.1E-15 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS07785 99c3e7f7b74e8a47b1099bd958d54757 463 Gene3D G3DSA:1.10.8.210 151 208 2.8E-16 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS07785 99c3e7f7b74e8a47b1099bd958d54757 463 Gene3D G3DSA:3.30.950.10 340 462 1.5E-39 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CVS42_RS07785 99c3e7f7b74e8a47b1099bd958d54757 463 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 50.093 T 29-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS07785 99c3e7f7b74e8a47b1099bd958d54757 463 Pfam PF14824 Sirohaem biosynthesis protein central 119 146 2.2E-6 T 29-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS07785 99c3e7f7b74e8a47b1099bd958d54757 463 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS07785 99c3e7f7b74e8a47b1099bd958d54757 463 SUPERFAMILY SSF53790 212 456 3.66E-80 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CVS42_RS07785 99c3e7f7b74e8a47b1099bd958d54757 463 PIRSF PIRSF036426 1 462 5.1E-199 T 29-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS07785 99c3e7f7b74e8a47b1099bd958d54757 463 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 215 447 5.7E-91 T 29-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS07785 99c3e7f7b74e8a47b1099bd958d54757 463 Pfam PF13241 Putative NAD(P)-binding 6 115 1.5E-25 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS07785 99c3e7f7b74e8a47b1099bd958d54757 463 Gene3D G3DSA:3.40.1010.10 214 339 1.3E-35 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CVS42_RS07785 99c3e7f7b74e8a47b1099bd958d54757 463 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 1.5E-70 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CVS42_RS07785 99c3e7f7b74e8a47b1099bd958d54757 463 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 217 427 2.8E-48 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CVS42_RS07785 99c3e7f7b74e8a47b1099bd958d54757 463 SUPERFAMILY SSF75615 114 208 1.57E-23 T 29-03-2018 CVS42_RS07785 99c3e7f7b74e8a47b1099bd958d54757 463 Gene3D G3DSA:3.30.160.110 121 148 1.8E-15 T 29-03-2018 CVS42_RS07785 99c3e7f7b74e8a47b1099bd958d54757 463 SUPERFAMILY SSF51735 1 112 3.28E-26 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS17230 0e0a8c6aa87db3136e1dba0493d240f3 85 SUPERFAMILY SSF110324 2 82 6.98E-33 T 29-03-2018 CVS42_RS17230 0e0a8c6aa87db3136e1dba0493d240f3 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 7.5E-36 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17230 0e0a8c6aa87db3136e1dba0493d240f3 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 7.5E-36 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17230 0e0a8c6aa87db3136e1dba0493d240f3 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 7.5E-36 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17230 0e0a8c6aa87db3136e1dba0493d240f3 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.491 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17230 0e0a8c6aa87db3136e1dba0493d240f3 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.4E-40 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17230 0e0a8c6aa87db3136e1dba0493d240f3 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-15 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17230 0e0a8c6aa87db3136e1dba0493d240f3 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 29-03-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS17230 0e0a8c6aa87db3136e1dba0493d240f3 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.5E-37 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17230 0e0a8c6aa87db3136e1dba0493d240f3 85 Gene3D G3DSA:2.40.50.100 20 84 4.8E-29 T 29-03-2018 CVS42_RS18815 f078f16a7dbb9fb2be01856163ba4d3d 451 SUPERFAMILY SSF53623 99 308 6.41E-54 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS18815 f078f16a7dbb9fb2be01856163ba4d3d 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 396 1.4E-12 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CVS42_RS18815 f078f16a7dbb9fb2be01856163ba4d3d 451 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 441 1.1E-138 T 29-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS18815 f078f16a7dbb9fb2be01856163ba4d3d 451 Pfam PF01225 Mur ligase family, catalytic domain 23 71 2.1E-10 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CVS42_RS18815 f078f16a7dbb9fb2be01856163ba4d3d 451 Pfam PF08245 Mur ligase middle domain 105 289 1.3E-48 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS18815 f078f16a7dbb9fb2be01856163ba4d3d 451 Gene3D G3DSA:3.90.190.20 311 451 6.3E-39 T 29-03-2018 CVS42_RS18815 f078f16a7dbb9fb2be01856163ba4d3d 451 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 443 34.537 T 29-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS18815 f078f16a7dbb9fb2be01856163ba4d3d 451 SUPERFAMILY SSF63418 1 96 4.32E-25 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CVS42_RS18815 f078f16a7dbb9fb2be01856163ba4d3d 451 SUPERFAMILY SSF53244 311 441 1.97E-33 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CVS42_RS18815 f078f16a7dbb9fb2be01856163ba4d3d 451 Gene3D G3DSA:3.40.1190.10 81 307 2.2E-55 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS18815 f078f16a7dbb9fb2be01856163ba4d3d 451 Gene3D G3DSA:3.40.1390.10 1 80 1.4E-26 T 29-03-2018 CVS42_RS17740 e6b4fef297edcdb597015b84b7b5544e 332 Pfam PF04492 Bacteriophage replication protein O 67 161 8.9E-32 T 29-03-2018 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 CVS42_RS17740 e6b4fef297edcdb597015b84b7b5544e 332 TIGRFAM TIGR01610 phage_O_Nterm: phage replication protein O, N-terminal domain 70 161 6.7E-27 T 29-03-2018 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 CVS42_RS11370 1f7aa5318d08ca0ac675c3bd35a9a86c 417 Pfam PF00589 Phage integrase family 206 390 9.1E-15 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS11370 1f7aa5318d08ca0ac675c3bd35a9a86c 417 Gene3D G3DSA:1.10.150.130 87 195 1.8E-13 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CVS42_RS11370 1f7aa5318d08ca0ac675c3bd35a9a86c 417 Pfam PF12167 Arm DNA-binding domain 18 80 3.9E-24 T 29-03-2018 IPR022000 Min27-like integrase, DNA-binding domain CVS42_RS11370 1f7aa5318d08ca0ac675c3bd35a9a86c 417 Gene3D G3DSA:1.10.443.10 196 412 5.7E-32 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS11370 1f7aa5318d08ca0ac675c3bd35a9a86c 417 SUPERFAMILY SSF56349 93 399 1.58E-46 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CVS42_RS15590 ea594e4d856963432e16d62e03dda7c9 516 Pfam PF00390 Malic enzyme, N-terminal domain 60 238 9.2E-65 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CVS42_RS15590 ea594e4d856963432e16d62e03dda7c9 516 Gene3D G3DSA:3.40.50.10380 2 245 6.5E-91 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CVS42_RS15590 ea594e4d856963432e16d62e03dda7c9 516 Pfam PF03949 Malic enzyme, NAD binding domain 248 486 3.5E-73 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CVS42_RS15590 ea594e4d856963432e16d62e03dda7c9 516 PIRSF PIRSF000106 1 515 3.3E-178 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS15590 ea594e4d856963432e16d62e03dda7c9 516 PRINTS PR00072 Malic enzyme signature 160 182 3.2E-68 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS15590 ea594e4d856963432e16d62e03dda7c9 516 PRINTS PR00072 Malic enzyme signature 219 237 3.2E-68 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS15590 ea594e4d856963432e16d62e03dda7c9 516 PRINTS PR00072 Malic enzyme signature 65 89 3.2E-68 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS15590 ea594e4d856963432e16d62e03dda7c9 516 PRINTS PR00072 Malic enzyme signature 369 385 3.2E-68 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS15590 ea594e4d856963432e16d62e03dda7c9 516 PRINTS PR00072 Malic enzyme signature 244 260 3.2E-68 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS15590 ea594e4d856963432e16d62e03dda7c9 516 PRINTS PR00072 Malic enzyme signature 124 153 3.2E-68 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS15590 ea594e4d856963432e16d62e03dda7c9 516 PRINTS PR00072 Malic enzyme signature 275 291 3.2E-68 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS15590 ea594e4d856963432e16d62e03dda7c9 516 SMART SM01274 59 238 2.8E-88 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CVS42_RS15590 ea594e4d856963432e16d62e03dda7c9 516 SUPERFAMILY SSF51735 248 512 5.91E-76 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS15590 ea594e4d856963432e16d62e03dda7c9 516 Gene3D G3DSA:3.40.50.720 246 515 5.4E-84 T 29-03-2018 CVS42_RS15590 ea594e4d856963432e16d62e03dda7c9 516 SUPERFAMILY SSF53223 7 247 5.9E-84 T 29-03-2018 CVS42_RS15590 ea594e4d856963432e16d62e03dda7c9 516 SMART SM00919 248 488 1.1E-93 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CVS42_RS05160 e6cad62e1d381b77a172911c3412c9a4 621 SUPERFAMILY SSF55545 129 244 6.8E-18 T 29-03-2018 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS05160 e6cad62e1d381b77a172911c3412c9a4 621 Gene3D G3DSA:3.20.20.80 243 621 2.7E-132 T 29-03-2018 CVS42_RS05160 e6cad62e1d381b77a172911c3412c9a4 621 SUPERFAMILY SSF51445 245 602 1.52E-126 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS05160 e6cad62e1d381b77a172911c3412c9a4 621 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 245 589 2.8E-111 T 29-03-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CVS42_RS05160 e6cad62e1d381b77a172911c3412c9a4 621 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 132 242 6.3E-15 T 29-03-2018 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CVS42_RS05160 e6cad62e1d381b77a172911c3412c9a4 621 Gene3D G3DSA:3.30.379.10 128 242 4.8E-16 T 29-03-2018 CVS42_RS05160 e6cad62e1d381b77a172911c3412c9a4 621 PRINTS PR00738 Glycosyl hydrolase family 20 signature 338 355 1.0E-45 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS05160 e6cad62e1d381b77a172911c3412c9a4 621 PRINTS PR00738 Glycosyl hydrolase family 20 signature 409 422 1.0E-45 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS05160 e6cad62e1d381b77a172911c3412c9a4 621 PRINTS PR00738 Glycosyl hydrolase family 20 signature 387 405 1.0E-45 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS05160 e6cad62e1d381b77a172911c3412c9a4 621 PRINTS PR00738 Glycosyl hydrolase family 20 signature 206 226 1.0E-45 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS05160 e6cad62e1d381b77a172911c3412c9a4 621 PRINTS PR00738 Glycosyl hydrolase family 20 signature 571 588 1.0E-45 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS05160 e6cad62e1d381b77a172911c3412c9a4 621 PRINTS PR00738 Glycosyl hydrolase family 20 signature 553 569 1.0E-45 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS05160 e6cad62e1d381b77a172911c3412c9a4 621 PRINTS PR00738 Glycosyl hydrolase family 20 signature 239 256 1.0E-45 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS05160 e6cad62e1d381b77a172911c3412c9a4 621 PRINTS PR00738 Glycosyl hydrolase family 20 signature 268 289 1.0E-45 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CVS42_RS10120 880af8cb528df25d385a835d67d7e6c4 55 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.4E-19 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS10120 880af8cb528df25d385a835d67d7e6c4 55 Pfam PF01783 Ribosomal L32p protein family 2 54 6.8E-19 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS10120 880af8cb528df25d385a835d67d7e6c4 55 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.594 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS10120 880af8cb528df25d385a835d67d7e6c4 55 SUPERFAMILY SSF57829 2 54 5.62E-18 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CVS42_RS17675 8626ca13642df5f82bd5b41326dd3998 337 SUPERFAMILY SSF53067 3 122 1.42E-30 T 29-03-2018 CVS42_RS17675 8626ca13642df5f82bd5b41326dd3998 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 1.0E-124 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CVS42_RS17675 8626ca13642df5f82bd5b41326dd3998 337 Gene3D G3DSA:3.30.420.40 1 144 1.5E-39 T 29-03-2018 CVS42_RS17675 8626ca13642df5f82bd5b41326dd3998 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.4E-51 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CVS42_RS17675 8626ca13642df5f82bd5b41326dd3998 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.4E-51 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CVS42_RS17675 8626ca13642df5f82bd5b41326dd3998 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.4E-51 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CVS42_RS17675 8626ca13642df5f82bd5b41326dd3998 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.4E-51 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CVS42_RS17675 8626ca13642df5f82bd5b41326dd3998 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.4E-51 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CVS42_RS17675 8626ca13642df5f82bd5b41326dd3998 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.4E-51 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CVS42_RS17675 8626ca13642df5f82bd5b41326dd3998 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 62.314 T 29-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CVS42_RS17675 8626ca13642df5f82bd5b41326dd3998 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 29-03-2018 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 CVS42_RS17675 8626ca13642df5f82bd5b41326dd3998 337 Pfam PF00814 Glycoprotease family 24 307 1.6E-100 T 29-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CVS42_RS17675 8626ca13642df5f82bd5b41326dd3998 337 Gene3D G3DSA:3.30.420.40 145 290 2.3E-18 T 29-03-2018 CVS42_RS17675 8626ca13642df5f82bd5b41326dd3998 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.2E-135 T 29-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CVS42_RS17675 8626ca13642df5f82bd5b41326dd3998 337 SUPERFAMILY SSF53067 101 309 3.7E-44 T 29-03-2018 CVS42_RS08585 0d3b158c5e32c2859ddd7ccb410d0225 134 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 15 39 - T 29-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS08585 0d3b158c5e32c2859ddd7ccb410d0225 134 PIRSF PIRSF000178 3 134 1.2E-32 T 29-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS08585 0d3b158c5e32c2859ddd7ccb410d0225 134 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 13 131 2.5E-41 T 29-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS08585 0d3b158c5e32c2859ddd7ccb410d0225 134 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 90 103 - T 29-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS08585 0d3b158c5e32c2859ddd7ccb410d0225 134 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 128 2.0E-31 T 29-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS08585 0d3b158c5e32c2859ddd7ccb410d0225 134 Gene3D G3DSA:1.20.1300.10 8 134 5.8E-28 T 29-03-2018 CVS42_RS08585 0d3b158c5e32c2859ddd7ccb410d0225 134 SUPERFAMILY SSF81343 8 134 1.96E-35 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS14525 2702f2a078b62719cfab40f7f31f3376 551 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 368 382 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CVS42_RS14525 2702f2a078b62719cfab40f7f31f3376 551 SUPERFAMILY SSF160246 1 143 1.07E-19 T 29-03-2018 CVS42_RS14525 2702f2a078b62719cfab40f7f31f3376 551 Pfam PF00437 Type II/IV secretion system protein 177 440 6.0E-76 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CVS42_RS14525 2702f2a078b62719cfab40f7f31f3376 551 Gene3D G3DSA:3.30.450.90 137 274 2.1E-42 T 29-03-2018 CVS42_RS14525 2702f2a078b62719cfab40f7f31f3376 551 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 40 148 1.5E-8 T 29-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 CVS42_RS14525 2702f2a078b62719cfab40f7f31f3376 551 Gene3D G3DSA:3.40.50.300 288 551 2.7E-52 T 29-03-2018 CVS42_RS14525 2702f2a078b62719cfab40f7f31f3376 551 SUPERFAMILY SSF52540 160 550 1.34E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS20720 0b21166ede3359f24625a21616e57053 177 Gene3D G3DSA:1.20.1290.10 42 168 2.4E-24 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CVS42_RS20720 0b21166ede3359f24625a21616e57053 177 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 56 99 1.4E-11 T 29-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CVS42_RS20720 0b21166ede3359f24625a21616e57053 177 SUPERFAMILY SSF69118 5 174 1.35E-43 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CVS42_RS20720 0b21166ede3359f24625a21616e57053 177 Gene3D G3DSA:1.20.5.810 11 41 3.2E-14 T 29-03-2018 CVS42_RS20720 0b21166ede3359f24625a21616e57053 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 39 105 4.6E-14 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CVS42_RS10295 401e1810bde03eeff3d12e2354a2d356 640 SMART SM00763 19 376 1.4E-208 T 29-03-2018 IPR013153 PrkA AAA domain CVS42_RS10295 401e1810bde03eeff3d12e2354a2d356 640 Pfam PF08298 PrkA AAA domain 20 376 8.7E-173 T 29-03-2018 IPR013153 PrkA AAA domain CVS42_RS10295 401e1810bde03eeff3d12e2354a2d356 640 PIRSF PIRSF000549 1 640 2.3E-288 T 29-03-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 CVS42_RS10295 401e1810bde03eeff3d12e2354a2d356 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 1.2E-73 T 29-03-2018 IPR010650 PrkA C-terminal domain CVS42_RS10295 401e1810bde03eeff3d12e2354a2d356 640 SUPERFAMILY SSF52540 75 146 3.84E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS10295 401e1810bde03eeff3d12e2354a2d356 640 SUPERFAMILY SSF52540 249 364 3.84E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS10295 401e1810bde03eeff3d12e2354a2d356 640 Gene3D G3DSA:3.40.50.300 70 356 9.7E-13 T 29-03-2018 CVS42_RS21855 5a6f85d1afeace3af80c0c32805804a3 233 SMART SM00382 26 212 5.4E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS21855 5a6f85d1afeace3af80c0c32805804a3 233 Pfam PF00005 ABC transporter 17 161 4.0E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS21855 5a6f85d1afeace3af80c0c32805804a3 233 SUPERFAMILY SSF52540 1 231 8.1E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS21855 5a6f85d1afeace3af80c0c32805804a3 233 PIRSF PIRSF039137 1 233 1.3E-104 T 29-03-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 CVS42_RS21855 5a6f85d1afeace3af80c0c32805804a3 233 Gene3D G3DSA:3.40.50.300 1 232 1.1E-60 T 29-03-2018 CVS42_RS21855 5a6f85d1afeace3af80c0c32805804a3 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS05600 00df2a201a7261add096023c3d4e43c1 214 SMART SM00382 27 210 5.1E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS05600 00df2a201a7261add096023c3d4e43c1 214 Gene3D G3DSA:3.40.50.300 1 199 8.4E-44 T 29-03-2018 CVS42_RS05600 00df2a201a7261add096023c3d4e43c1 214 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 3 200 7.0E-79 T 29-03-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 CVS42_RS05600 00df2a201a7261add096023c3d4e43c1 214 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS05600 00df2a201a7261add096023c3d4e43c1 214 SUPERFAMILY SSF52540 2 195 1.54E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS05600 00df2a201a7261add096023c3d4e43c1 214 Pfam PF00005 ABC transporter 19 160 1.1E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS09195 f0cef9f0d5c1cf6907d7d9c4ea1cb4dd 439 SUPERFAMILY SSF140570 117 279 1.7E-68 T 29-03-2018 IPR033440 Chromosome partition protein MukF, middle domain CVS42_RS09195 f0cef9f0d5c1cf6907d7d9c4ea1cb4dd 439 Pfam PF17192 MukF middle domain 120 279 3.7E-73 T 29-03-2018 IPR033440 Chromosome partition protein MukF, middle domain CVS42_RS09195 f0cef9f0d5c1cf6907d7d9c4ea1cb4dd 439 SUPERFAMILY SSF46785 9 116 3.81E-38 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS09195 f0cef9f0d5c1cf6907d7d9c4ea1cb4dd 439 Gene3D G3DSA:1.10.10.10 24 114 1.2E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS09195 f0cef9f0d5c1cf6907d7d9c4ea1cb4dd 439 Pfam PF03882 MukF winged-helix domain 4 115 2.9E-49 T 29-03-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain CVS42_RS09195 f0cef9f0d5c1cf6907d7d9c4ea1cb4dd 439 Pfam PF17193 MukF C-terminal domain 281 439 1.1E-71 T 29-03-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain CVS42_RS20880 2d26eb3fba98310bd322c542bca9c5c3 466 SUPERFAMILY SSF118215 29 441 1.31E-85 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS20880 2d26eb3fba98310bd322c542bca9c5c3 466 Pfam PF00375 Sodium:dicarboxylate symporter family 30 441 2.2E-93 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS20880 2d26eb3fba98310bd322c542bca9c5c3 466 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.2E-19 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS20880 2d26eb3fba98310bd322c542bca9c5c3 466 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.2E-19 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS20880 2d26eb3fba98310bd322c542bca9c5c3 466 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 1.2E-19 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS20880 2d26eb3fba98310bd322c542bca9c5c3 466 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 1.2E-19 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS20880 2d26eb3fba98310bd322c542bca9c5c3 466 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 1.2E-19 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS20880 2d26eb3fba98310bd322c542bca9c5c3 466 Gene3D G3DSA:1.10.3860.10 21 449 1.3E-82 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS10735 6e4148d284b274a90ae3c41f63246f58 399 Pfam PF13692 Glycosyl transferases group 1 219 347 4.7E-9 T 29-03-2018 CVS42_RS10735 6e4148d284b274a90ae3c41f63246f58 399 SUPERFAMILY SSF53756 97 376 6.8E-23 T 29-03-2018 CVS42_RS10735 6e4148d284b274a90ae3c41f63246f58 399 Gene3D G3DSA:3.40.50.2000 94 205 8.1E-4 T 29-03-2018 CVS42_RS10735 6e4148d284b274a90ae3c41f63246f58 399 Gene3D G3DSA:3.40.50.2000 206 353 8.8E-18 T 29-03-2018 CVS42_RS05515 eecf9d4de7b5d039fcb6f97b6d3ad89f 89 PIRSF PIRSF004669 1 89 1.9E-24 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CVS42_RS05515 eecf9d4de7b5d039fcb6f97b6d3ad89f 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.3E-26 T 29-03-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 CVS42_RS05515 eecf9d4de7b5d039fcb6f97b6d3ad89f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 7.7E-12 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CVS42_RS05515 eecf9d4de7b5d039fcb6f97b6d3ad89f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 7.7E-12 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CVS42_RS05515 eecf9d4de7b5d039fcb6f97b6d3ad89f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 7.7E-12 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CVS42_RS05515 eecf9d4de7b5d039fcb6f97b6d3ad89f 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.4E-25 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CVS42_RS06245 976b36e1a18c711baf87594b5c58cbb4 346 SUPERFAMILY SSF49373 170 229 1.33E-8 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CVS42_RS06245 976b36e1a18c711baf87594b5c58cbb4 346 Gene3D G3DSA:2.60.40.1080 136 232 1.6E-17 T 29-03-2018 CVS42_RS06245 976b36e1a18c711baf87594b5c58cbb4 346 Gene3D G3DSA:2.60.40.1080 39 135 8.4E-18 T 29-03-2018 CVS42_RS06245 976b36e1a18c711baf87594b5c58cbb4 346 Pfam PF02368 Bacterial Ig-like domain (group 2) 139 220 2.5E-9 T 29-03-2018 IPR003343 Bacterial Ig-like, group 2 CVS42_RS06245 976b36e1a18c711baf87594b5c58cbb4 346 Pfam PF02368 Bacterial Ig-like domain (group 2) 43 124 4.7E-9 T 29-03-2018 IPR003343 Bacterial Ig-like, group 2 CVS42_RS06245 976b36e1a18c711baf87594b5c58cbb4 346 SUPERFAMILY SSF49373 74 133 4.16E-8 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CVS42_RS06245 976b36e1a18c711baf87594b5c58cbb4 346 SMART SM00635 42 131 1.1E-8 T 29-03-2018 IPR003343 Bacterial Ig-like, group 2 CVS42_RS06245 976b36e1a18c711baf87594b5c58cbb4 346 SMART SM00635 138 227 1.1E-8 T 29-03-2018 IPR003343 Bacterial Ig-like, group 2 CVS42_RS06245 976b36e1a18c711baf87594b5c58cbb4 346 Gene3D G3DSA:3.10.100.10 236 346 7.1E-4 T 29-03-2018 IPR016186 C-type lectin-like/link domain CVS42_RS15805 5f2a242c7d748a0a3c773edbb425fa79 299 Gene3D G3DSA:3.40.190.10 176 262 7.2E-27 T 29-03-2018 CVS42_RS15805 5f2a242c7d748a0a3c773edbb425fa79 299 Gene3D G3DSA:1.10.10.10 3 83 6.9E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS15805 5f2a242c7d748a0a3c773edbb425fa79 299 SUPERFAMILY SSF53850 89 294 6.7E-46 T 29-03-2018 CVS42_RS15805 5f2a242c7d748a0a3c773edbb425fa79 299 Pfam PF03466 LysR substrate binding domain 88 292 4.3E-46 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS15805 5f2a242c7d748a0a3c773edbb425fa79 299 Gene3D G3DSA:3.40.190.10 88 175 2.2E-17 T 29-03-2018 CVS42_RS15805 5f2a242c7d748a0a3c773edbb425fa79 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.9E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS15805 5f2a242c7d748a0a3c773edbb425fa79 299 SUPERFAMILY SSF46785 4 111 7.71E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS16950 7535ca66d016b88be3533ec6708bbdeb 341 SUPERFAMILY SSF161098 106 326 2.75E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS16950 7535ca66d016b88be3533ec6708bbdeb 341 Gene3D G3DSA:1.10.3720.10 3 327 1.0E-35 T 29-03-2018 CVS42_RS16950 7535ca66d016b88be3533ec6708bbdeb 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 3.1E-34 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS11525 91eab2423b26e5adc4f43cba76a4435e 455 Gene3D G3DSA:3.40.50.1970 123 253 8.7E-4 T 29-03-2018 CVS42_RS11525 91eab2423b26e5adc4f43cba76a4435e 455 Pfam PF13742 OB-fold nucleic acid binding domain 18 111 1.7E-30 T 29-03-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CVS42_RS11525 91eab2423b26e5adc4f43cba76a4435e 455 Gene3D G3DSA:2.40.50.140 30 113 2.9E-7 T 29-03-2018 CVS42_RS11525 91eab2423b26e5adc4f43cba76a4435e 455 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 15 451 31.271 T 29-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CVS42_RS11525 91eab2423b26e5adc4f43cba76a4435e 455 Pfam PF02601 Exonuclease VII, large subunit 134 448 1.8E-98 T 29-03-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CVS42_RS11525 91eab2423b26e5adc4f43cba76a4435e 455 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 19 368 1.7E-138 T 29-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 SMART SM00532 3 459 4.2E-256 T 29-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 Gene3D G3DSA:2.40.50.140 316 389 3.3E-34 T 29-03-2018 CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 6 317 2.8E-125 T 29-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 Gene3D G3DSA:3.30.470.30 119 251 9.5E-51 T 29-03-2018 CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 SMART SM00292 707 784 1.2E-10 T 29-03-2018 IPR001357 BRCT domain CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 SUPERFAMILY SSF52113 706 782 4.49E-17 T 29-03-2018 IPR001357 BRCT domain CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 Gene3D G3DSA:1.10.150.20 521 595 2.3E-10 T 29-03-2018 CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 Pfam PF14520 Helix-hairpin-helix domain 461 506 0.0014 T 29-03-2018 CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 711 780 1.0E-14 T 29-03-2018 IPR001357 BRCT domain CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 Gene3D G3DSA:1.10.287.610 2 67 1.2E-21 T 29-03-2018 CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 Hamap MF_01588 DNA ligase [ligA]. 2 781 47.511 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 SUPERFAMILY SSF50249 317 399 2.91E-28 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 330 345 - T 29-03-2018 IPR033136 NAD-dependent DNA ligase, conserved site CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 321 397 3.2E-35 T 29-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 Gene3D G3DSA:1.10.150.20 443 514 3.4E-21 T 29-03-2018 CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 29-03-2018 IPR018239 NAD-dependent DNA ligase, active site CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 Pfam PF12826 Helix-hairpin-helix motif 523 582 1.2E-10 T 29-03-2018 CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 SUPERFAMILY SSF56091 3 315 8.0E-117 T 29-03-2018 CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 SUPERFAMILY SSF47781 403 589 8.9E-35 T 29-03-2018 IPR010994 RuvA domain 2-like CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 590 3.9E-205 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 PIRSF PIRSF001604 1 597 2.5E-196 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 PIRSF PIRSF001604 600 785 1.3E-28 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CVS42_RS15655 ff96b99758ddec23589c9d396f1112fa 787 Gene3D G3DSA:3.40.50.10190 680 785 1.4E-20 T 29-03-2018 IPR001357 BRCT domain CVS42_RS09425 f8c6ac430211c5025ea685b96dd96943 636 Pfam PF00270 DEAD/DEAH box helicase 35 82 1.8E-5 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CVS42_RS09425 f8c6ac430211c5025ea685b96dd96943 636 SMART SM00491 476 605 2.2E-44 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CVS42_RS09425 f8c6ac430211c5025ea685b96dd96943 636 Gene3D G3DSA:3.40.50.300 19 423 4.4E-27 T 29-03-2018 CVS42_RS09425 f8c6ac430211c5025ea685b96dd96943 636 SUPERFAMILY SSF52540 390 404 6.17E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09425 f8c6ac430211c5025ea685b96dd96943 636 SUPERFAMILY SSF52540 175 250 6.17E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09425 f8c6ac430211c5025ea685b96dd96943 636 SUPERFAMILY SSF52540 36 86 6.17E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09425 f8c6ac430211c5025ea685b96dd96943 636 SUPERFAMILY SSF52540 435 597 6.17E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09425 f8c6ac430211c5025ea685b96dd96943 636 Pfam PF13307 Helicase C-terminal domain 461 617 5.6E-37 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CVS42_RS09425 f8c6ac430211c5025ea685b96dd96943 636 Gene3D G3DSA:3.40.50.300 447 617 8.3E-15 T 29-03-2018 CVS42_RS04670 5c7acd840a27536b6fd5366921f72d96 118 Pfam PF02313 Fumarate reductase subunit D 1 112 2.5E-47 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CVS42_RS04670 5c7acd840a27536b6fd5366921f72d96 118 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 2 109 3.0E-29 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CVS42_RS04670 5c7acd840a27536b6fd5366921f72d96 118 Gene3D G3DSA:1.20.1300.10 1 115 4.7E-23 T 29-03-2018 CVS42_RS04670 5c7acd840a27536b6fd5366921f72d96 118 PIRSF PIRSF000179 1 116 1.7E-46 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CVS42_RS04670 5c7acd840a27536b6fd5366921f72d96 118 SUPERFAMILY SSF81343 2 113 4.91E-41 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS11235 c4d798e7291d704743110cdba99f2b99 109 Pfam PF07102 Protein of unknown function (DUF1364) 12 98 5.0E-23 T 29-03-2018 IPR010774 Protein of unknown function DUF1364 CVS42_RS11235 c4d798e7291d704743110cdba99f2b99 109 Gene3D G3DSA:3.30.50.20 28 101 9.3E-16 T 29-03-2018 CVS42_RS09875 566e2e76e552ba0516f188927391c3bb 58 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.553 T 29-03-2018 IPR007040 Ribosome modulation factor CVS42_RS09875 566e2e76e552ba0516f188927391c3bb 58 Pfam PF04957 Ribosome modulation factor 1 54 7.8E-27 T 29-03-2018 IPR007040 Ribosome modulation factor CVS42_RS09875 566e2e76e552ba0516f188927391c3bb 58 Gene3D G3DSA:1.10.10.620 3 54 1.4E-20 T 29-03-2018 CVS42_RS09875 566e2e76e552ba0516f188927391c3bb 58 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 52 4.0E-17 T 29-03-2018 IPR007040 Ribosome modulation factor CVS42_RS08610 f711df2e569742a6c0f957c75260619e 396 SUPERFAMILY SSF51230 1 94 2.75E-25 T 29-03-2018 IPR011053 Single hybrid motif CVS42_RS08610 f711df2e569742a6c0f957c75260619e 396 Gene3D G3DSA:3.30.559.10 152 394 1.5E-92 T 29-03-2018 CVS42_RS08610 f711df2e569742a6c0f957c75260619e 396 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CVS42_RS08610 f711df2e569742a6c0f957c75260619e 396 Pfam PF00364 Biotin-requiring enzyme 4 76 4.1E-19 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CVS42_RS08610 f711df2e569742a6c0f957c75260619e 396 SUPERFAMILY SSF52777 167 395 4.36E-91 T 29-03-2018 CVS42_RS08610 f711df2e569742a6c0f957c75260619e 396 Gene3D G3DSA:4.10.320.10 91 151 1.6E-18 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CVS42_RS08610 f711df2e569742a6c0f957c75260619e 396 SUPERFAMILY SSF47005 96 139 2.09E-11 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CVS42_RS08610 f711df2e569742a6c0f957c75260619e 396 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 166 394 4.1E-82 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CVS42_RS08610 f711df2e569742a6c0f957c75260619e 396 Pfam PF02817 e3 binding domain 102 135 1.6E-13 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CVS42_RS08610 f711df2e569742a6c0f957c75260619e 396 Gene3D G3DSA:2.40.50.100 2 80 1.8E-13 T 29-03-2018 CVS42_RS08610 f711df2e569742a6c0f957c75260619e 396 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 396 1.2E-182 T 29-03-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CVS42_RS12995 ce529e9605a738bf5c0e8b49710cb001 564 Gene3D G3DSA:3.60.20.10 49 216 4.5E-17 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS12995 ce529e9605a738bf5c0e8b49710cb001 564 SUPERFAMILY SSF56235 57 214 5.11E-20 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS12995 ce529e9605a738bf5c0e8b49710cb001 564 SUPERFAMILY SSF52402 405 461 2.23E-23 T 29-03-2018 CVS42_RS12995 ce529e9605a738bf5c0e8b49710cb001 564 SUPERFAMILY SSF52402 209 366 2.23E-23 T 29-03-2018 CVS42_RS12995 ce529e9605a738bf5c0e8b49710cb001 564 Pfam PF00733 Asparagine synthase 233 377 1.3E-7 T 29-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CVS42_RS12995 ce529e9605a738bf5c0e8b49710cb001 564 Pfam PF13537 Glutamine amidotransferase domain 58 154 6.4E-13 T 29-03-2018 IPR017932 Glutamine amidotransferase type 2 domain CVS42_RS12995 ce529e9605a738bf5c0e8b49710cb001 564 Gene3D G3DSA:3.40.50.620 217 554 7.5E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS08895 d555b7b1cb6213bd0faa2c2a988f44e5 808 Gene3D G3DSA:3.30.420.10 176 371 2.9E-38 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS08895 d555b7b1cb6213bd0faa2c2a988f44e5 808 SMART SM00486 172 577 1.2E-68 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS08895 d555b7b1cb6213bd0faa2c2a988f44e5 808 SUPERFAMILY SSF56672 409 802 3.0E-116 T 29-03-2018 CVS42_RS08895 d555b7b1cb6213bd0faa2c2a988f44e5 808 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 439 452 1.7E-10 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS08895 d555b7b1cb6213bd0faa2c2a988f44e5 808 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 511 523 1.7E-10 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS08895 d555b7b1cb6213bd0faa2c2a988f44e5 808 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 563 571 1.7E-10 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS08895 d555b7b1cb6213bd0faa2c2a988f44e5 808 SUPERFAMILY SSF53098 15 413 9.93E-80 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS08895 d555b7b1cb6213bd0faa2c2a988f44e5 808 ProSitePatterns PS00116 DNA polymerase family B signature. 565 573 - T 29-03-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS08895 d555b7b1cb6213bd0faa2c2a988f44e5 808 Pfam PF03104 DNA polymerase family B, exonuclease domain 114 320 1.6E-13 T 29-03-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS08895 d555b7b1cb6213bd0faa2c2a988f44e5 808 Gene3D G3DSA:3.90.1600.10 417 623 4.6E-51 T 29-03-2018 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS08895 d555b7b1cb6213bd0faa2c2a988f44e5 808 Pfam PF00136 DNA polymerase family B 402 760 2.9E-41 T 29-03-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS07595 edb55bb57dedce3f32abbb201b91e008 331 Pfam PF01136 Peptidase family U32 76 330 3.2E-69 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CVS42_RS07595 edb55bb57dedce3f32abbb201b91e008 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CVS42_RS07595 edb55bb57dedce3f32abbb201b91e008 331 Gene3D G3DSA:3.20.20.150 8 317 8.5E-17 T 29-03-2018 CVS42_RS01070 c8000855ba156733468f3259ae764120 103 SUPERFAMILY SSF54999 5 101 1.23E-36 T 29-03-2018 IPR027486 Ribosomal protein S10 domain CVS42_RS01070 c8000855ba156733468f3259ae764120 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.412 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01070 c8000855ba156733468f3259ae764120 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 3.0E-35 T 29-03-2018 IPR027486 Ribosomal protein S10 domain CVS42_RS01070 c8000855ba156733468f3259ae764120 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.3E-46 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01070 c8000855ba156733468f3259ae764120 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01070 c8000855ba156733468f3259ae764120 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01070 c8000855ba156733468f3259ae764120 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01070 c8000855ba156733468f3259ae764120 103 SMART SM01403 7 101 9.2E-57 T 29-03-2018 IPR027486 Ribosomal protein S10 domain CVS42_RS01070 c8000855ba156733468f3259ae764120 103 Gene3D G3DSA:3.30.70.600 3 102 1.2E-35 T 29-03-2018 IPR027486 Ribosomal protein S10 domain CVS42_RS01070 c8000855ba156733468f3259ae764120 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 29-03-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS08490 8f873666caac276ea598807f6af93039 65 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 9.0E-20 T 29-03-2018 IPR025346 Protein of unknown function DUF4250 CVS42_RS06760 5ba82a37543001461911d6d3f5be38ef 244 Pfam PF00929 Exonuclease 10 176 5.4E-39 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CVS42_RS06760 5ba82a37543001461911d6d3f5be38ef 244 Gene3D G3DSA:3.30.420.10 1 192 3.6E-41 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS06760 5ba82a37543001461911d6d3f5be38ef 244 SMART SM00479 8 185 6.5E-54 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CVS42_RS06760 5ba82a37543001461911d6d3f5be38ef 244 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 8 244 2.1E-96 T 29-03-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS06760 5ba82a37543001461911d6d3f5be38ef 244 SUPERFAMILY SSF53098 8 187 1.81E-56 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS06760 5ba82a37543001461911d6d3f5be38ef 244 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 7 221 3.2E-80 T 29-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS09465 814592fb71c9446738fc82a55a7d4e7c 371 SUPERFAMILY SSF52821 94 154 3.43E-17 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS09465 814592fb71c9446738fc82a55a7d4e7c 371 SUPERFAMILY SSF52821 15 66 3.43E-17 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS09465 814592fb71c9446738fc82a55a7d4e7c 371 Gene3D G3DSA:3.40.250.10 7 132 2.2E-15 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS09465 814592fb71c9446738fc82a55a7d4e7c 371 SUPERFAMILY SSF52540 222 254 6.21E-7 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09465 814592fb71c9446738fc82a55a7d4e7c 371 SUPERFAMILY SSF52540 133 181 6.21E-7 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09465 814592fb71c9446738fc82a55a7d4e7c 371 Gene3D G3DSA:3.40.50.300 133 338 2.8E-6 T 29-03-2018 CVS42_RS09465 814592fb71c9446738fc82a55a7d4e7c 371 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 18 349 4.8E-100 T 29-03-2018 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 CVS42_RS09465 814592fb71c9446738fc82a55a7d4e7c 371 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 3 364 50.597 T 29-03-2018 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 CVS42_RS09465 814592fb71c9446738fc82a55a7d4e7c 371 SMART SM00450 4 134 7.3E-10 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS08735 34ca2ca4976fcd797c971bc8ab06e156 555 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 367 521 2.8E-41 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS08735 34ca2ca4976fcd797c971bc8ab06e156 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 1.6E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS08735 34ca2ca4976fcd797c971bc8ab06e156 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 418 1.6E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS08735 34ca2ca4976fcd797c971bc8ab06e156 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 315 344 1.6E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS08735 34ca2ca4976fcd797c971bc8ab06e156 555 SMART SM00304 224 278 2.4E-14 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS08735 34ca2ca4976fcd797c971bc8ab06e156 555 SMART SM01049 42 131 1.4E-27 T 29-03-2018 IPR033480 Single Cache domain 2 CVS42_RS08735 34ca2ca4976fcd797c971bc8ab06e156 555 SUPERFAMILY SSF58104 246 555 1.22E-77 T 29-03-2018 CVS42_RS08735 34ca2ca4976fcd797c971bc8ab06e156 555 Pfam PF17200 Single Cache domain 2 46 187 8.0E-33 T 29-03-2018 IPR033480 Single Cache domain 2 CVS42_RS08735 34ca2ca4976fcd797c971bc8ab06e156 555 SMART SM00283 293 554 1.7E-71 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS08735 34ca2ca4976fcd797c971bc8ab06e156 555 Gene3D G3DSA:3.30.450.20 26 204 3.8E-40 T 29-03-2018 CVS42_RS08735 34ca2ca4976fcd797c971bc8ab06e156 555 Gene3D G3DSA:1.10.287.950 341 555 6.1E-50 T 29-03-2018 CVS42_RS08735 34ca2ca4976fcd797c971bc8ab06e156 555 Gene3D G3DSA:1.10.287.950 235 340 8.0E-9 T 29-03-2018 CVS42_RS08735 34ca2ca4976fcd797c971bc8ab06e156 555 Pfam PF00672 HAMP domain 225 274 1.1E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS00025 37e71e5877506b31c0b176ea048958fc 119 SUPERFAMILY SSF54211 6 118 2.05E-31 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS00025 37e71e5877506b31c0b176ea048958fc 119 Pfam PF00825 Ribonuclease P 7 113 2.9E-33 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CVS42_RS00025 37e71e5877506b31c0b176ea048958fc 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 106 2.0E-28 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CVS42_RS00025 37e71e5877506b31c0b176ea048958fc 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 57 71 - T 29-03-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 CVS42_RS00025 37e71e5877506b31c0b176ea048958fc 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 7 116 18.016 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CVS42_RS00025 37e71e5877506b31c0b176ea048958fc 119 Gene3D G3DSA:3.30.230.10 2 119 4.9E-33 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CVS42_RS00025 37e71e5877506b31c0b176ea048958fc 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 7 114 7.3E-30 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CVS42_RS12470 478a37ad84267033ae118eb38621237b 362 SUPERFAMILY SSF51695 29 354 4.97E-92 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CVS42_RS12470 478a37ad84267033ae118eb38621237b 362 Gene3D G3DSA:3.20.20.190 28 355 4.4E-63 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CVS42_RS12470 478a37ad84267033ae118eb38621237b 362 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 33 349 7.2E-68 T 29-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CVS42_RS16725 94986404f664f1293c296a72d92c2b37 574 Pfam PF00005 ABC transporter 24 181 3.7E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS16725 94986404f664f1293c296a72d92c2b37 574 Pfam PF00005 ABC transporter 331 484 1.5E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS16725 94986404f664f1293c296a72d92c2b37 574 SUPERFAMILY SSF52540 318 554 4.6E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS16725 94986404f664f1293c296a72d92c2b37 574 SMART SM00382 32 231 1.4E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS16725 94986404f664f1293c296a72d92c2b37 574 SMART SM00382 339 539 2.9E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS16725 94986404f664f1293c296a72d92c2b37 574 ProSitePatterns PS00211 ABC transporters family signature. 456 470 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS16725 94986404f664f1293c296a72d92c2b37 574 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS16725 94986404f664f1293c296a72d92c2b37 574 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 263 3.7E-5 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CVS42_RS16725 94986404f664f1293c296a72d92c2b37 574 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 535 567 0.0038 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CVS42_RS16725 94986404f664f1293c296a72d92c2b37 574 Gene3D G3DSA:3.40.50.300 1 279 8.6E-66 T 29-03-2018 CVS42_RS16725 94986404f664f1293c296a72d92c2b37 574 Gene3D G3DSA:3.40.50.300 301 573 2.7E-72 T 29-03-2018 CVS42_RS16725 94986404f664f1293c296a72d92c2b37 574 SUPERFAMILY SSF52540 3 253 7.87E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 0.0 T 29-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 7.7E-46 T 29-03-2018 IPR032090 Peptide chain release factor 3, C-terminal CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 Gene3D G3DSA:3.40.50.300 8 274 1.2E-36 T 29-03-2018 CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 SUPERFAMILY SSF50447 262 393 1.77E-29 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 Gene3D G3DSA:2.40.30.10 275 387 4.0E-23 T 29-03-2018 CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 2.8E-10 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 Gene3D G3DSA:3.30.70.870 388 465 3.0E-10 T 29-03-2018 CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.268 T 29-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 167 6.5E-19 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 SUPERFAMILY SSF52540 10 278 1.31E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 7.4E-46 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS17840 e618865a0c46e664009b6106cc8b2496 529 SUPERFAMILY SSF54980 393 468 3.17E-17 T 29-03-2018 IPR035647 EF-G domain III/V-like CVS42_RS02735 c0cb22ebdd53c8c071bba26ad8e7e181 189 SUPERFAMILY SSF159594 24 186 4.45E-28 T 29-03-2018 CVS42_RS02735 c0cb22ebdd53c8c071bba26ad8e7e181 189 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 26 181 1.2E-39 T 29-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CVS42_RS02735 c0cb22ebdd53c8c071bba26ad8e7e181 189 Gene3D G3DSA:3.40.50.10610 13 189 2.8E-44 T 29-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CVS42_RS02320 7c104d6a04c169146905d6b0fab922a6 259 SUPERFAMILY SSF81345 3 257 3.4E-40 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CVS42_RS02320 7c104d6a04c169146905d6b0fab922a6 259 Gene3D G3DSA:1.10.3470.10 3 259 1.9E-26 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CVS42_RS02320 7c104d6a04c169146905d6b0fab922a6 259 Pfam PF00950 ABC 3 transport family 3 256 4.1E-76 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CVS42_RS07260 8a633472cbc2822aa15678f5a3d3b9fd 794 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 346 2.4E-116 T 29-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CVS42_RS07260 8a633472cbc2822aa15678f5a3d3b9fd 794 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 484 784 4.6E-60 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CVS42_RS07260 8a633472cbc2822aa15678f5a3d3b9fd 794 Gene3D G3DSA:3.50.30.10 360 476 2.9E-36 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CVS42_RS07260 8a633472cbc2822aa15678f5a3d3b9fd 794 SUPERFAMILY SSF52009 351 468 3.66E-34 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CVS42_RS07260 8a633472cbc2822aa15678f5a3d3b9fd 794 SUPERFAMILY SSF51621 464 790 1.44E-98 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CVS42_RS07260 8a633472cbc2822aa15678f5a3d3b9fd 794 PIRSF PIRSF000854 1 794 0.0 T 29-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 CVS42_RS07260 8a633472cbc2822aa15678f5a3d3b9fd 794 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 416 427 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CVS42_RS07260 8a633472cbc2822aa15678f5a3d3b9fd 794 Gene3D G3DSA:3.30.1490.20 1 195 8.6E-54 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CVS42_RS07260 8a633472cbc2822aa15678f5a3d3b9fd 794 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 696 714 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CVS42_RS07260 8a633472cbc2822aa15678f5a3d3b9fd 794 Pfam PF00391 PEP-utilising enzyme, mobile domain 386 457 3.3E-26 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CVS42_RS07260 8a633472cbc2822aa15678f5a3d3b9fd 794 SUPERFAMILY SSF56059 2 387 3.41E-107 T 29-03-2018 CVS42_RS07260 8a633472cbc2822aa15678f5a3d3b9fd 794 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 789 0.0 T 29-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 CVS42_RS07260 8a633472cbc2822aa15678f5a3d3b9fd 794 Gene3D G3DSA:3.30.470.20 196 359 8.0E-46 T 29-03-2018 CVS42_RS07260 8a633472cbc2822aa15678f5a3d3b9fd 794 Gene3D G3DSA:3.20.20.60 480 792 1.5E-107 T 29-03-2018 CVS42_RS09065 044cd444bc461ed0c0e44bdc7ddf4e4e 219 SUPERFAMILY SSF56784 2 209 3.74E-51 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS09065 044cd444bc461ed0c0e44bdc7ddf4e4e 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 178 1.3E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS09065 044cd444bc461ed0c0e44bdc7ddf4e4e 219 Gene3D G3DSA:3.40.50.1000 3 26 0.24 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS09065 044cd444bc461ed0c0e44bdc7ddf4e4e 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 3.7E-25 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS09065 044cd444bc461ed0c0e44bdc7ddf4e4e 219 Gene3D G3DSA:1.10.150.240 27 72 1.3E-20 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CVS42_RS09065 044cd444bc461ed0c0e44bdc7ddf4e4e 219 Gene3D G3DSA:3.40.50.1000 73 218 5.6E-28 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS09065 044cd444bc461ed0c0e44bdc7ddf4e4e 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 103 184 3.9E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS09065 044cd444bc461ed0c0e44bdc7ddf4e4e 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 3.8E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS09065 044cd444bc461ed0c0e44bdc7ddf4e4e 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 3.8E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS09065 044cd444bc461ed0c0e44bdc7ddf4e4e 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 3.8E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS09065 044cd444bc461ed0c0e44bdc7ddf4e4e 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 3.8E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS22090 f4eac6418a0db753b5455aac86be6651 264 Pfam PF00905 Penicillin binding protein transpeptidase domain 41 256 1.3E-45 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CVS42_RS22090 f4eac6418a0db753b5455aac86be6651 264 Gene3D G3DSA:3.40.710.10 14 259 1.8E-24 T 29-03-2018 CVS42_RS22090 f4eac6418a0db753b5455aac86be6651 264 ProSitePatterns PS00337 Beta-lactamase class-D active site. 49 59 - T 29-03-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 CVS42_RS22090 f4eac6418a0db753b5455aac86be6651 264 SUPERFAMILY SSF56601 20 236 7.25E-32 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CVS42_RS11900 13e28080d24e28ffbf2e18c89d7483be 230 SUPERFAMILY SSF52540 5 223 9.46E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11900 13e28080d24e28ffbf2e18c89d7483be 230 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 35.09 T 29-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CVS42_RS11900 13e28080d24e28ffbf2e18c89d7483be 230 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 219 2.5E-90 T 29-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CVS42_RS11900 13e28080d24e28ffbf2e18c89d7483be 230 Pfam PF02224 Cytidylate kinase 9 221 6.2E-82 T 29-03-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CVS42_RS11900 13e28080d24e28ffbf2e18c89d7483be 230 Gene3D G3DSA:3.40.50.300 4 224 6.5E-52 T 29-03-2018 CVS42_RS10160 4b84ae09e12e25670e712212a08d4987 329 PIRSF PIRSF000535 1 309 1.8E-96 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CVS42_RS10160 4b84ae09e12e25670e712212a08d4987 329 Gene3D G3DSA:3.40.1190.20 45 310 9.8E-50 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS10160 4b84ae09e12e25670e712212a08d4987 329 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 3 306 2.0E-105 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CVS42_RS10160 4b84ae09e12e25670e712212a08d4987 329 Gene3D G3DSA:2.20.150.10 10 44 4.8E-12 T 29-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain CVS42_RS10160 4b84ae09e12e25670e712212a08d4987 329 SUPERFAMILY SSF53613 3 288 5.92E-70 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS10160 4b84ae09e12e25670e712212a08d4987 329 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 247 260 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CVS42_RS10160 4b84ae09e12e25670e712212a08d4987 329 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 3 306 5.0E-105 T 29-03-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 CVS42_RS10160 4b84ae09e12e25670e712212a08d4987 329 Pfam PF00294 pfkB family carbohydrate kinase 10 289 1.9E-53 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CVS42_RS10160 4b84ae09e12e25670e712212a08d4987 329 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 37 61 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CVS42_RS11750 47a55b494a1f42dc1d08725fb833503c 72 PRINTS PR00050 Cold shock protein signature 4 19 2.1E-15 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CVS42_RS11750 47a55b494a1f42dc1d08725fb833503c 72 PRINTS PR00050 Cold shock protein signature 25 34 2.1E-15 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CVS42_RS11750 47a55b494a1f42dc1d08725fb833503c 72 PRINTS PR00050 Cold shock protein signature 40 58 2.1E-15 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CVS42_RS11750 47a55b494a1f42dc1d08725fb833503c 72 PIRSF PIRSF002599 1 72 7.8E-23 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CVS42_RS11750 47a55b494a1f42dc1d08725fb833503c 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 29-03-2018 IPR019844 Cold-shock conserved site CVS42_RS11750 47a55b494a1f42dc1d08725fb833503c 72 SMART SM00357 3 67 2.3E-26 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CVS42_RS11750 47a55b494a1f42dc1d08725fb833503c 72 Gene3D G3DSA:2.40.50.140 1 72 5.7E-25 T 29-03-2018 CVS42_RS11750 47a55b494a1f42dc1d08725fb833503c 72 SUPERFAMILY SSF50249 1 64 7.07E-23 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS11750 47a55b494a1f42dc1d08725fb833503c 72 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.0E-28 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CVS42_RS11750 47a55b494a1f42dc1d08725fb833503c 72 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 66 2.2E-40 T 29-03-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 ProSitePatterns PS00455 Putative AMP-binding domain signature. 619 630 - T 29-03-2018 IPR020845 AMP-binding, conserved site CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 Pfam PF00550 Phosphopantetheine attachment site 982 1046 2.6E-14 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 Gene3D G3DSA:3.30.300.30 869 987 5.2E-34 T 29-03-2018 CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 Pfam PF00975 Thioesterase domain 1072 1298 1.4E-28 T 29-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 SUPERFAMILY SSF56801 452 994 3.14E-160 T 29-03-2018 CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 495 897 5.6E-133 T 29-03-2018 IPR010071 Amino acid adenylation domain CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 SUPERFAMILY SSF53474 1045 1312 5.08E-47 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 Pfam PF13193 AMP-binding enzyme C-terminal domain 881 956 5.2E-12 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 Pfam PF00668 Condensation domain 20 437 4.1E-46 T 29-03-2018 IPR001242 Condensation domain CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 Pfam PF00501 AMP-binding enzyme 480 873 1.1E-104 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 SUPERFAMILY SSF47336 976 1046 2.36E-18 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 Gene3D G3DSA:3.40.50.980 624 784 1.1E-46 T 29-03-2018 CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 Gene3D G3DSA:2.30.38.10 785 866 1.8E-22 T 29-03-2018 CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 SUPERFAMILY SSF52777 21 187 3.11E-33 T 29-03-2018 CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 Gene3D G3DSA:3.30.559.10 1 200 4.6E-25 T 29-03-2018 CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 Gene3D G3DSA:3.40.50.1820 1063 1315 6.2E-25 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 Gene3D G3DSA:1.10.1200.10 988 1044 5.8E-22 T 29-03-2018 CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 SMART SM00823 Phosphopantetheine attachment site 981 1050 2.6E-6 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1005 1020 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 PRINTS PR00154 AMP-binding signature 626 634 7.0E-5 T 29-03-2018 IPR020459 AMP-binding CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 PRINTS PR00154 AMP-binding signature 614 625 7.0E-5 T 29-03-2018 IPR020459 AMP-binding CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 Gene3D G3DSA:3.40.50.980 464 623 7.5E-43 T 29-03-2018 CVS42_RS13735 9ed730238178014f58599b10708ba84f 1329 SUPERFAMILY SSF52777 200 435 1.07E-30 T 29-03-2018 CVS42_RS10130 29e95d4b778138c55b938713dd1602d3 193 SUPERFAMILY SSF52972 3 186 7.19E-58 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CVS42_RS10130 29e95d4b778138c55b938713dd1602d3 193 Pfam PF02545 Maf-like protein 5 187 6.7E-46 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CVS42_RS10130 29e95d4b778138c55b938713dd1602d3 193 Gene3D G3DSA:3.90.950.10 1 192 1.7E-56 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CVS42_RS10130 29e95d4b778138c55b938713dd1602d3 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 185 6.8E-57 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CVS42_RS10130 29e95d4b778138c55b938713dd1602d3 193 PIRSF PIRSF006305 1 192 3.0E-46 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CVS42_RS10130 29e95d4b778138c55b938713dd1602d3 193 Hamap MF_00528 Septum formation protein Maf [maf]. 4 192 29.298 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CVS42_RS08415 afafc638dd4e018d0fde034f674817f0 300 SUPERFAMILY SSF46785 2 83 1.04E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08415 afafc638dd4e018d0fde034f674817f0 300 SUPERFAMILY SSF53850 88 296 1.23E-32 T 29-03-2018 CVS42_RS08415 afafc638dd4e018d0fde034f674817f0 300 Gene3D G3DSA:1.10.10.10 1 86 4.9E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08415 afafc638dd4e018d0fde034f674817f0 300 Gene3D G3DSA:3.40.190.10 92 180 5.6E-9 T 29-03-2018 CVS42_RS08415 afafc638dd4e018d0fde034f674817f0 300 Pfam PF03466 LysR substrate binding domain 91 297 4.9E-18 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS08415 afafc638dd4e018d0fde034f674817f0 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 5.1E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS08415 afafc638dd4e018d0fde034f674817f0 300 Gene3D G3DSA:3.40.190.10 181 269 1.0E-10 T 29-03-2018 CVS42_RS06780 b42d74df96cd5827c286abeaaf5e3386 655 Gene3D G3DSA:2.170.130.10 27 165 5.0E-34 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS06780 b42d74df96cd5827c286abeaaf5e3386 655 Gene3D G3DSA:2.40.170.20 168 654 2.0E-74 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS06780 b42d74df96cd5827c286abeaaf5e3386 655 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 29-03-2018 IPR010916 TonB box, conserved site CVS42_RS06780 b42d74df96cd5827c286abeaaf5e3386 655 Pfam PF00593 TonB dependent receptor 250 654 2.4E-58 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS06780 b42d74df96cd5827c286abeaaf5e3386 655 SUPERFAMILY SSF56935 30 654 3.14E-124 T 29-03-2018 CVS42_RS06780 b42d74df96cd5827c286abeaaf5e3386 655 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 158 6.2E-29 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS20865 0f61cc1851badc4980bfa89329d20e32 326 SUPERFAMILY SSF55174 17 69 4.04E-10 T 29-03-2018 CVS42_RS20865 0f61cc1851badc4980bfa89329d20e32 326 SMART SM00363 18 76 4.5E-7 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS20865 0f61cc1851badc4980bfa89329d20e32 326 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS20865 0f61cc1851badc4980bfa89329d20e32 326 SUPERFAMILY SSF55120 79 318 8.43E-79 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS20865 0f61cc1851badc4980bfa89329d20e32 326 Pfam PF00849 RNA pseudouridylate synthase 92 242 1.4E-30 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS20865 0f61cc1851badc4980bfa89329d20e32 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 1.3E-104 T 29-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS20865 0f61cc1851badc4980bfa89329d20e32 326 Gene3D G3DSA:3.30.2350.10 83 316 3.5E-68 T 29-03-2018 CVS42_RS20865 0f61cc1851badc4980bfa89329d20e32 326 Gene3D G3DSA:3.10.290.10 2 76 1.6E-17 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS20865 0f61cc1851badc4980bfa89329d20e32 326 Pfam PF01479 S4 domain 18 65 1.3E-8 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS04300 60170b61e05a03ca6f4a671c057dda0f 111 Pfam PF11333 Protein of unknown function (DUF3135) 2 81 1.3E-26 T 29-03-2018 IPR021482 Protein of unknown function DUF3135 CVS42_RS00985 6e73a16a765dbeba4df59445a120f9c2 216 Pfam PF00805 Pentapeptide repeats (8 copies) 6 42 1.1E-5 T 29-03-2018 IPR001646 Pentapeptide repeat CVS42_RS00985 6e73a16a765dbeba4df59445a120f9c2 216 Pfam PF00805 Pentapeptide repeats (8 copies) 173 198 6.8E-5 T 29-03-2018 IPR001646 Pentapeptide repeat CVS42_RS00985 6e73a16a765dbeba4df59445a120f9c2 216 Pfam PF00805 Pentapeptide repeats (8 copies) 54 80 2.7E-4 T 29-03-2018 IPR001646 Pentapeptide repeat CVS42_RS00985 6e73a16a765dbeba4df59445a120f9c2 216 Gene3D G3DSA:2.160.20.80 2 216 7.6E-47 T 29-03-2018 CVS42_RS00985 6e73a16a765dbeba4df59445a120f9c2 216 Pfam PF13599 Pentapeptide repeats (9 copies) 98 165 2.4E-9 T 29-03-2018 IPR001646 Pentapeptide repeat CVS42_RS00985 6e73a16a765dbeba4df59445a120f9c2 216 SUPERFAMILY SSF141571 12 199 9.81E-37 T 29-03-2018 CVS42_RS09820 03453987f4eee29f87e82d996f8e8404 874 SUPERFAMILY SSF55486 207 453 6.59E-75 T 29-03-2018 CVS42_RS09820 03453987f4eee29f87e82d996f8e8404 874 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 129 144 2.7E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CVS42_RS09820 03453987f4eee29f87e82d996f8e8404 874 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 179 194 2.7E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CVS42_RS09820 03453987f4eee29f87e82d996f8e8404 874 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 316 328 2.7E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CVS42_RS09820 03453987f4eee29f87e82d996f8e8404 874 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 297 312 2.7E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CVS42_RS09820 03453987f4eee29f87e82d996f8e8404 874 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 261 271 2.7E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CVS42_RS09820 03453987f4eee29f87e82d996f8e8404 874 Gene3D G3DSA:1.10.390.10 283 446 3.8E-50 T 29-03-2018 CVS42_RS09820 03453987f4eee29f87e82d996f8e8404 874 Pfam PF01433 Peptidase family M1 domain 211 442 2.2E-58 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CVS42_RS09820 03453987f4eee29f87e82d996f8e8404 874 SUPERFAMILY SSF63737 9 196 2.88E-46 T 29-03-2018 CVS42_RS09820 03453987f4eee29f87e82d996f8e8404 874 Gene3D G3DSA:1.25.50.10 549 873 3.0E-116 T 29-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CVS42_RS09820 03453987f4eee29f87e82d996f8e8404 874 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 447 548 2.4E-33 T 29-03-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CVS42_RS09820 03453987f4eee29f87e82d996f8e8404 874 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 551 873 1.0E-111 T 29-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CVS42_RS09820 03453987f4eee29f87e82d996f8e8404 874 Gene3D G3DSA:2.60.40.1730 18 197 8.0E-29 T 29-03-2018 CVS42_RS09820 03453987f4eee29f87e82d996f8e8404 874 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 15 872 0.0 T 29-03-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 CVS42_RS17980 773707afc085998d8eb6459e1b0b9bb9 455 Gene3D G3DSA:3.30.230.10 287 455 3.7E-32 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CVS42_RS17980 773707afc085998d8eb6459e1b0b9bb9 455 Gene3D G3DSA:3.40.50.300 74 284 5.2E-37 T 29-03-2018 CVS42_RS17980 773707afc085998d8eb6459e1b0b9bb9 455 Pfam PF13481 AAA domain 81 223 1.3E-12 T 29-03-2018 CVS42_RS17980 773707afc085998d8eb6459e1b0b9bb9 455 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 452 9.4E-223 T 29-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CVS42_RS17980 773707afc085998d8eb6459e1b0b9bb9 455 Pfam PF13541 Subunit ChlI of Mg-chelatase 346 431 1.1E-9 T 29-03-2018 CVS42_RS17980 773707afc085998d8eb6459e1b0b9bb9 455 SMART SM00382 92 245 1.2E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS17980 773707afc085998d8eb6459e1b0b9bb9 455 Hamap MF_01498 DNA repair protein RadA [radA]. 21 453 42.28 T 29-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CVS42_RS17980 773707afc085998d8eb6459e1b0b9bb9 455 SUPERFAMILY SSF54211 256 270 2.31E-43 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS17980 773707afc085998d8eb6459e1b0b9bb9 455 SUPERFAMILY SSF54211 304 455 2.31E-43 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS17980 773707afc085998d8eb6459e1b0b9bb9 455 SUPERFAMILY SSF52540 71 291 8.89E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS17980 773707afc085998d8eb6459e1b0b9bb9 455 PRINTS PR01874 DNA repair protein radA signature 10 34 4.4E-93 T 29-03-2018 CVS42_RS17980 773707afc085998d8eb6459e1b0b9bb9 455 PRINTS PR01874 DNA repair protein radA signature 125 142 4.4E-93 T 29-03-2018 CVS42_RS17980 773707afc085998d8eb6459e1b0b9bb9 455 PRINTS PR01874 DNA repair protein radA signature 175 199 4.4E-93 T 29-03-2018 CVS42_RS17980 773707afc085998d8eb6459e1b0b9bb9 455 PRINTS PR01874 DNA repair protein radA signature 323 346 4.4E-93 T 29-03-2018 CVS42_RS17980 773707afc085998d8eb6459e1b0b9bb9 455 PRINTS PR01874 DNA repair protein radA signature 84 112 4.4E-93 T 29-03-2018 CVS42_RS17980 773707afc085998d8eb6459e1b0b9bb9 455 PRINTS PR01874 DNA repair protein radA signature 214 242 4.4E-93 T 29-03-2018 CVS42_RS17980 773707afc085998d8eb6459e1b0b9bb9 455 PRINTS PR01874 DNA repair protein radA signature 249 275 4.4E-93 T 29-03-2018 CVS42_RS16535 2feaa082d3ffd6645cbc7d676a518b17 313 SUPERFAMILY SSF53850 87 290 3.26E-38 T 29-03-2018 CVS42_RS16535 2feaa082d3ffd6645cbc7d676a518b17 313 Pfam PF03466 LysR substrate binding domain 94 289 1.3E-20 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS16535 2feaa082d3ffd6645cbc7d676a518b17 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 5.0E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS16535 2feaa082d3ffd6645cbc7d676a518b17 313 SUPERFAMILY SSF46785 3 83 1.31E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS16535 2feaa082d3ffd6645cbc7d676a518b17 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS16535 2feaa082d3ffd6645cbc7d676a518b17 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS16535 2feaa082d3ffd6645cbc7d676a518b17 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS16535 2feaa082d3ffd6645cbc7d676a518b17 313 Gene3D G3DSA:3.40.190.10 91 176 6.2E-11 T 29-03-2018 CVS42_RS16535 2feaa082d3ffd6645cbc7d676a518b17 313 Gene3D G3DSA:3.40.190.10 177 266 4.3E-14 T 29-03-2018 CVS42_RS16535 2feaa082d3ffd6645cbc7d676a518b17 313 Gene3D G3DSA:1.10.10.10 2 85 9.5E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS17950 e0d9dbbccaf9ac186024ddca9a5efa66 412 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 21 380 7.8E-97 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CVS42_RS17950 e0d9dbbccaf9ac186024ddca9a5efa66 412 Pfam PF01566 Natural resistance-associated macrophage protein 40 386 1.3E-124 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CVS42_RS17950 e0d9dbbccaf9ac186024ddca9a5efa66 412 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 3 412 36.35 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CVS42_RS17950 e0d9dbbccaf9ac186024ddca9a5efa66 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 302 321 2.4E-28 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CVS42_RS17950 e0d9dbbccaf9ac186024ddca9a5efa66 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 152 173 2.4E-28 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CVS42_RS17950 e0d9dbbccaf9ac186024ddca9a5efa66 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 127 146 2.4E-28 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CVS42_RS17950 e0d9dbbccaf9ac186024ddca9a5efa66 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 99 125 2.4E-28 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CVS42_RS17950 e0d9dbbccaf9ac186024ddca9a5efa66 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 202 225 2.4E-28 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CVS42_RS05680 4fb551a1459fa448eb880bf0508f50d1 149 Pfam PF00293 NUDIX domain 10 116 3.0E-15 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CVS42_RS05680 4fb551a1459fa448eb880bf0508f50d1 149 Gene3D G3DSA:3.90.79.10 1 140 3.3E-23 T 29-03-2018 CVS42_RS05680 4fb551a1459fa448eb880bf0508f50d1 149 PRINTS PR00502 NUDIX hydrolase family signature 44 59 4.0E-5 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CVS42_RS05680 4fb551a1459fa448eb880bf0508f50d1 149 PRINTS PR00502 NUDIX hydrolase family signature 30 44 4.0E-5 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CVS42_RS05680 4fb551a1459fa448eb880bf0508f50d1 149 SUPERFAMILY SSF55811 6 144 1.1E-26 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CVS42_RS05680 4fb551a1459fa448eb880bf0508f50d1 149 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 Gene3D G3DSA:3.40.50.970 802 1183 5.1E-102 T 29-03-2018 CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 SUPERFAMILY SSF52518 4 258 1.04E-77 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 5 1180 0.0 T 29-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 Gene3D G3DSA:3.30.70.20 674 799 1.6E-27 T 29-03-2018 CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 271 351 1.3E-12 T 29-03-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 Gene3D G3DSA:3.40.50.970 2 258 1.0E-51 T 29-03-2018 CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 SUPERFAMILY SSF54862 670 847 6.84E-21 T 29-03-2018 CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 Gene3D G3DSA:3.40.920.10 422 631 1.4E-52 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 SUPERFAMILY SSF52922 260 419 6.28E-38 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 750 761 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 SUPERFAMILY SSF53323 423 673 6.93E-71 T 29-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 Pfam PF10371 Domain of unknown function 640 683 3.1E-17 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 Pfam PF12838 4Fe-4S dicluster domain 694 764 3.9E-10 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 SUPERFAMILY SSF52518 803 1183 7.23E-128 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 431 612 2.5E-26 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 969 1081 1.6E-10 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 SMART SM00890 628 684 5.9E-22 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 Gene3D G3DSA:3.40.50.920 259 421 8.4E-38 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 PIRSF PIRSF000159 1 1188 0.0 T 29-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 Gene3D G3DSA:4.10.780.10 641 672 1.1E-10 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CVS42_RS14025 f783d3397a14aa9985b445e27d45bb44 1191 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 17 247 3.4E-85 T 29-03-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CVS42_RS09120 4813a14c238f494c8930ad913843ab89 240 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 10 231 42.291 T 29-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 CVS42_RS09120 4813a14c238f494c8930ad913843ab89 240 Pfam PF00912 Transglycosylase 58 225 3.1E-50 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CVS42_RS09120 4813a14c238f494c8930ad913843ab89 240 SUPERFAMILY SSF53955 59 238 1.69E-59 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS09120 4813a14c238f494c8930ad913843ab89 240 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 21 229 5.6E-82 T 29-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 CVS42_RS09120 4813a14c238f494c8930ad913843ab89 240 Gene3D G3DSA:1.10.3810.10 53 240 7.4E-58 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CVS42_RS21740 c4f28a37d8d2e9127d44d7c03a44a937 412 SUPERFAMILY SSF53850 17 407 1.34E-48 T 29-03-2018 CVS42_RS21740 c4f28a37d8d2e9127d44d7c03a44a937 412 Gene3D G3DSA:3.40.190.10 18 195 2.4E-20 T 29-03-2018 CVS42_RS21740 c4f28a37d8d2e9127d44d7c03a44a937 412 Pfam PF01547 Bacterial extracellular solute-binding protein 41 283 7.7E-15 T 29-03-2018 IPR006059 Solute-binding family 1 GO:0006810 CVS42_RS21740 c4f28a37d8d2e9127d44d7c03a44a937 412 Gene3D G3DSA:3.40.190.10 196 368 6.2E-13 T 29-03-2018 CVS42_RS16840 7f74856105d57f8edf9cc87e803ea6cb 648 SUPERFAMILY SSF56801 8 642 2.09E-185 T 29-03-2018 CVS42_RS16840 7f74856105d57f8edf9cc87e803ea6cb 648 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 644 53.749 T 29-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CVS42_RS16840 7f74856105d57f8edf9cc87e803ea6cb 648 Pfam PF13193 AMP-binding enzyme C-terminal domain 530 608 3.8E-26 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CVS42_RS16840 7f74856105d57f8edf9cc87e803ea6cb 648 Pfam PF00501 AMP-binding enzyme 83 521 3.4E-94 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CVS42_RS16840 7f74856105d57f8edf9cc87e803ea6cb 648 Gene3D G3DSA:2.30.38.10 429 514 7.6E-13 T 29-03-2018 CVS42_RS16840 7f74856105d57f8edf9cc87e803ea6cb 648 ProSitePatterns PS00455 Putative AMP-binding domain signature. 260 271 - T 29-03-2018 IPR020845 AMP-binding, conserved site CVS42_RS16840 7f74856105d57f8edf9cc87e803ea6cb 648 Gene3D G3DSA:3.40.50.980 74 265 5.3E-54 T 29-03-2018 CVS42_RS16840 7f74856105d57f8edf9cc87e803ea6cb 648 Gene3D G3DSA:3.30.300.30 517 645 3.6E-27 T 29-03-2018 CVS42_RS16840 7f74856105d57f8edf9cc87e803ea6cb 648 Gene3D G3DSA:3.40.50.980 266 428 1.5E-35 T 29-03-2018 CVS42_RS16840 7f74856105d57f8edf9cc87e803ea6cb 648 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 22 642 0.0 T 29-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CVS42_RS16840 7f74856105d57f8edf9cc87e803ea6cb 648 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 2.7E-21 T 29-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CVS42_RS07800 e7df4ce8d0193c00014787543203697d 352 Gene3D G3DSA:3.30.70.20 134 236 0.091 T 29-03-2018 CVS42_RS07800 e7df4ce8d0193c00014787543203697d 352 Gene3D G3DSA:3.30.70.20 316 350 0.013 T 29-03-2018 CVS42_RS07800 e7df4ce8d0193c00014787543203697d 352 TIGRFAM TIGR02910 sulfite_red_A: sulfite reductase, subunit A 1 341 1.4E-152 T 29-03-2018 IPR014259 Sulphite reductase, subunit A CVS42_RS07800 e7df4ce8d0193c00014787543203697d 352 SUPERFAMILY SSF46548 213 339 1.46E-15 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CVS42_RS07800 e7df4ce8d0193c00014787543203697d 352 Gene3D G3DSA:3.30.70.20 237 315 1.8E-7 T 29-03-2018 CVS42_RS07800 e7df4ce8d0193c00014787543203697d 352 Pfam PF17179 4Fe-4S dicluster domain 229 326 5.2E-31 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS07800 e7df4ce8d0193c00014787543203697d 352 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 312 323 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS07800 e7df4ce8d0193c00014787543203697d 352 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 230 241 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS03285 7549d8ec7b92d21a209e0ad20a75bda2 737 Pfam PF04607 Region found in RelA / SpoT proteins 247 356 1.7E-37 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CVS42_RS03285 7549d8ec7b92d21a209e0ad20a75bda2 737 SUPERFAMILY SSF109604 51 203 3.77E-42 T 29-03-2018 CVS42_RS03285 7549d8ec7b92d21a209e0ad20a75bda2 737 Pfam PF13291 ACT domain 660 736 1.9E-17 T 29-03-2018 IPR002912 ACT domain CVS42_RS03285 7549d8ec7b92d21a209e0ad20a75bda2 737 Pfam PF02824 TGS domain 402 461 9.5E-20 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CVS42_RS03285 7549d8ec7b92d21a209e0ad20a75bda2 737 SMART SM00954 247 357 6.7E-65 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CVS42_RS03285 7549d8ec7b92d21a209e0ad20a75bda2 737 Gene3D G3DSA:3.30.460.10 204 337 2.5E-44 T 29-03-2018 CVS42_RS03285 7549d8ec7b92d21a209e0ad20a75bda2 737 SUPERFAMILY SSF55021 664 736 4.93E-12 T 29-03-2018 CVS42_RS03285 7549d8ec7b92d21a209e0ad20a75bda2 737 Gene3D G3DSA:3.10.20.30 396 471 2.0E-24 T 29-03-2018 IPR012675 Beta-grasp domain CVS42_RS03285 7549d8ec7b92d21a209e0ad20a75bda2 737 Pfam PF13328 HD domain 49 187 6.7E-37 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS03285 7549d8ec7b92d21a209e0ad20a75bda2 737 SUPERFAMILY SSF81301 192 406 1.96E-64 T 29-03-2018 CVS42_RS03285 7549d8ec7b92d21a209e0ad20a75bda2 737 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 58 736 6.3E-186 T 29-03-2018 IPR004811 RelA/SpoT family GO:0015969 CVS42_RS03285 7549d8ec7b92d21a209e0ad20a75bda2 737 Gene3D G3DSA:3.30.70.260 660 736 2.3E-10 T 29-03-2018 CVS42_RS03285 7549d8ec7b92d21a209e0ad20a75bda2 737 SUPERFAMILY SSF81271 395 461 5.01E-21 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CVS42_RS03415 079a1baec0291a00957fa16ab92c5045 413 Pfam PF00924 Mechanosensitive ion channel 143 397 1.8E-54 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CVS42_RS03415 079a1baec0291a00957fa16ab92c5045 413 SUPERFAMILY SSF50182 187 252 2.98E-11 T 29-03-2018 IPR010920 LSM domain CVS42_RS03415 079a1baec0291a00957fa16ab92c5045 413 Gene3D G3DSA:2.30.30.60 202 252 4.3E-9 T 29-03-2018 CVS42_RS12305 c9a8ba4f3f73f15e66d3b9d25dd77c8f 251 SUPERFAMILY SSF53850 25 248 1.03E-34 T 29-03-2018 CVS42_RS12305 c9a8ba4f3f73f15e66d3b9d25dd77c8f 251 Gene3D G3DSA:3.40.190.10 21 142 4.0E-11 T 29-03-2018 CVS42_RS12305 c9a8ba4f3f73f15e66d3b9d25dd77c8f 251 Gene3D G3DSA:3.40.190.10 143 251 1.3E-5 T 29-03-2018 CVS42_RS12305 c9a8ba4f3f73f15e66d3b9d25dd77c8f 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 246 4.8E-23 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS12305 c9a8ba4f3f73f15e66d3b9d25dd77c8f 251 SMART SM00062 24 248 0.0053 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS16810 50e722da45fb885a84f2eed5d980fb4c 388 Gene3D G3DSA:3.90.10.10 35 70 0.018 T 29-03-2018 CVS42_RS16810 50e722da45fb885a84f2eed5d980fb4c 388 Gene3D G3DSA:1.10.760.10 325 386 0.41 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS16810 50e722da45fb885a84f2eed5d980fb4c 388 SUPERFAMILY SSF48695 9 186 2.72E-45 T 29-03-2018 IPR011031 Multihaem cytochrome CVS42_RS16810 50e722da45fb885a84f2eed5d980fb4c 388 Gene3D G3DSA:1.10.468.10 71 205 4.3E-27 T 29-03-2018 CVS42_RS16810 50e722da45fb885a84f2eed5d980fb4c 388 PIRSF PIRSF000014 1 387 6.5E-140 T 29-03-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 CVS42_RS16810 50e722da45fb885a84f2eed5d980fb4c 388 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 12 186 1.5E-62 T 29-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 SUPERFAMILY SSF81901 232 418 2.79E-30 T 29-03-2018 CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 Gene3D G3DSA:2.60.40.1180 135 168 1.5E-5 T 29-03-2018 CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 Gene3D G3DSA:2.60.40.1180 317 448 3.0E-21 T 29-03-2018 CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 Gene3D G3DSA:2.60.40.1180 53 134 2.3E-11 T 29-03-2018 CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 Gene3D G3DSA:2.60.40.1180 229 296 8.7E-8 T 29-03-2018 CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 Gene3D G3DSA:2.60.40.1180 169 228 2.4E-13 T 29-03-2018 CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 SUPERFAMILY SSF81901 135 227 5.36E-23 T 29-03-2018 CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 Pfam PF08238 Sel1 repeat 345 379 0.0052 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 Pfam PF08238 Sel1 repeat 151 182 0.0089 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 Pfam PF08238 Sel1 repeat 117 149 0.0038 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 Pfam PF08238 Sel1 repeat 80 114 1.3E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 Pfam PF08238 Sel1 repeat 41 67 0.12 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 Pfam PF08238 Sel1 repeat 184 216 2.7E-7 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 Pfam PF08238 Sel1 repeat 382 414 3.4E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 Pfam PF08238 Sel1 repeat 247 282 2.3E-4 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 SMART SM00671 247 282 0.0013 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 SMART SM00671 150 182 0.005 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 SMART SM00671 115 149 7.6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 SMART SM00671 38 69 0.91 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 SMART SM00671 183 218 6.9E-7 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 SMART SM00671 79 114 1.8E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 SMART SM00671 344 379 9.2E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 SMART SM00671 380 415 0.031 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 SMART SM00671 312 343 14.0 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS02530 26b21416c9278c98f993beaaedd3a563 448 SUPERFAMILY SSF81901 29 123 9.94E-15 T 29-03-2018 CVS42_RS04010 69abe16e4efe62915a23b22699edd0ab 468 SUPERFAMILY SSF52172 5 189 4.98E-45 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS04010 69abe16e4efe62915a23b22699edd0ab 468 SMART SM00448 6 117 4.3E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS04010 69abe16e4efe62915a23b22699edd0ab 468 Gene3D G3DSA:1.10.10.60 392 460 1.4E-13 T 29-03-2018 CVS42_RS04010 69abe16e4efe62915a23b22699edd0ab 468 Pfam PF00158 Sigma-54 interaction domain 146 311 9.4E-67 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CVS42_RS04010 69abe16e4efe62915a23b22699edd0ab 468 Gene3D G3DSA:3.40.50.2300 1 153 4.8E-34 T 29-03-2018 CVS42_RS04010 69abe16e4efe62915a23b22699edd0ab 468 Pfam PF00072 Response regulator receiver domain 8 117 5.1E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS04010 69abe16e4efe62915a23b22699edd0ab 468 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CVS42_RS04010 69abe16e4efe62915a23b22699edd0ab 468 Gene3D G3DSA:3.40.50.300 154 317 2.4E-27 T 29-03-2018 CVS42_RS04010 69abe16e4efe62915a23b22699edd0ab 468 Gene3D G3DSA:1.10.8.60 318 391 7.3E-22 T 29-03-2018 CVS42_RS04010 69abe16e4efe62915a23b22699edd0ab 468 Pfam PF02954 Bacterial regulatory protein, Fis family 422 458 1.8E-11 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS04010 69abe16e4efe62915a23b22699edd0ab 468 SMART SM00382 165 308 6.3E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS04010 69abe16e4efe62915a23b22699edd0ab 468 SUPERFAMILY SSF46689 358 458 4.3E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS04010 69abe16e4efe62915a23b22699edd0ab 468 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CVS42_RS04010 69abe16e4efe62915a23b22699edd0ab 468 SUPERFAMILY SSF52540 145 388 2.32E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS10700 364ab5d6fd586e7e3425ef5086d8f035 377 PIRSF PIRSF000310 2 367 2.1E-133 T 29-03-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CVS42_RS10700 364ab5d6fd586e7e3425ef5086d8f035 377 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 5 366 1.0E-166 T 29-03-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CVS42_RS10700 364ab5d6fd586e7e3425ef5086d8f035 377 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 32 1.3E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CVS42_RS10700 364ab5d6fd586e7e3425ef5086d8f035 377 Gene3D G3DSA:3.40.50.700 41 232 5.3E-54 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10700 364ab5d6fd586e7e3425ef5086d8f035 377 Gene3D G3DSA:4.10.480.10 233 310 5.9E-29 T 29-03-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CVS42_RS10700 364ab5d6fd586e7e3425ef5086d8f035 377 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 225 309 1.5E-26 T 29-03-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CVS42_RS10700 364ab5d6fd586e7e3425ef5086d8f035 377 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 230 248 3.3E-68 T 29-03-2018 CVS42_RS10700 364ab5d6fd586e7e3425ef5086d8f035 377 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 155 179 3.3E-68 T 29-03-2018 CVS42_RS10700 364ab5d6fd586e7e3425ef5086d8f035 377 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 254 280 3.3E-68 T 29-03-2018 CVS42_RS10700 364ab5d6fd586e7e3425ef5086d8f035 377 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 43 65 3.3E-68 T 29-03-2018 CVS42_RS10700 364ab5d6fd586e7e3425ef5086d8f035 377 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 66 90 3.3E-68 T 29-03-2018 CVS42_RS10700 364ab5d6fd586e7e3425ef5086d8f035 377 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 112 135 3.3E-68 T 29-03-2018 CVS42_RS10700 364ab5d6fd586e7e3425ef5086d8f035 377 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 212 229 3.3E-68 T 29-03-2018 CVS42_RS10700 364ab5d6fd586e7e3425ef5086d8f035 377 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 186 209 3.3E-68 T 29-03-2018 CVS42_RS10700 364ab5d6fd586e7e3425ef5086d8f035 377 SUPERFAMILY SSF56770 43 308 2.35E-86 T 29-03-2018 CVS42_RS10700 364ab5d6fd586e7e3425ef5086d8f035 377 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 58 205 8.8E-33 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12215 7ac92cbca768e24c0fae79451083b989 714 Pfam PF00005 ABC transporter 492 641 2.3E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS12215 7ac92cbca768e24c0fae79451083b989 714 Gene3D G3DSA:3.40.50.300 472 704 4.4E-65 T 29-03-2018 CVS42_RS12215 7ac92cbca768e24c0fae79451083b989 714 Gene3D G3DSA:3.90.70.10 9 130 2.1E-12 T 29-03-2018 CVS42_RS12215 7ac92cbca768e24c0fae79451083b989 714 SMART SM00382 501 687 2.5E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS12215 7ac92cbca768e24c0fae79451083b989 714 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 9 704 2.5E-304 T 29-03-2018 IPR017750 ATPase, type I secretion system CVS42_RS12215 7ac92cbca768e24c0fae79451083b989 714 Gene3D G3DSA:1.20.1560.10 131 461 1.8E-32 T 29-03-2018 CVS42_RS12215 7ac92cbca768e24c0fae79451083b989 714 SUPERFAMILY SSF90123 148 458 1.44E-49 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CVS42_RS12215 7ac92cbca768e24c0fae79451083b989 714 Pfam PF00664 ABC transporter transmembrane region 164 423 1.3E-19 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CVS42_RS12215 7ac92cbca768e24c0fae79451083b989 714 SUPERFAMILY SSF52540 464 699 5.21E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS16665 84040472f015102480524aa34344e9ee 209 SUPERFAMILY SSF53335 31 208 3.44E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS16665 84040472f015102480524aa34344e9ee 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 1.3E-56 T 29-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CVS42_RS16665 84040472f015102480524aa34344e9ee 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 207 8.9E-91 T 29-03-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 CVS42_RS16665 84040472f015102480524aa34344e9ee 209 Gene3D G3DSA:3.40.50.150 1 209 1.0E-57 T 29-03-2018 CVS42_RS16665 84040472f015102480524aa34344e9ee 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.346 T 29-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CVS42_RS16665 84040472f015102480524aa34344e9ee 209 PIRSF PIRSF005461 1 209 5.4E-82 T 29-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CVS42_RS00630 4d54e73ea966403be1411931d4fa9a02 442 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 442 43.391 T 29-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CVS42_RS00630 4d54e73ea966403be1411931d4fa9a02 442 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 442 2.0E-226 T 29-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CVS42_RS00630 4d54e73ea966403be1411931d4fa9a02 442 Gene3D G3DSA:3.40.50.300 7 122 1.5E-5 T 29-03-2018 CVS42_RS00630 4d54e73ea966403be1411931d4fa9a02 442 Pfam PF07724 AAA domain (Cdc48 subfamily) 187 328 1.1E-40 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CVS42_RS00630 4d54e73ea966403be1411931d4fa9a02 442 SMART SM00382 49 331 4.8E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS00630 4d54e73ea966403be1411931d4fa9a02 442 Gene3D G3DSA:1.10.8.10 231 242 0.0073 T 29-03-2018 CVS42_RS00630 4d54e73ea966403be1411931d4fa9a02 442 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 334 404 3.5E-6 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CVS42_RS00630 4d54e73ea966403be1411931d4fa9a02 442 Gene3D G3DSA:1.10.8.10 200 230 4.1E-14 T 29-03-2018 CVS42_RS00630 4d54e73ea966403be1411931d4fa9a02 442 SUPERFAMILY SSF52540 3 440 7.64E-93 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00630 4d54e73ea966403be1411931d4fa9a02 442 SMART SM01086 334 430 6.1E-24 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CVS42_RS00630 4d54e73ea966403be1411931d4fa9a02 442 Gene3D G3DSA:1.10.8.10 123 199 1.4E-29 T 29-03-2018 CVS42_RS00630 4d54e73ea966403be1411931d4fa9a02 442 Gene3D G3DSA:1.10.8.60 334 430 2.1E-30 T 29-03-2018 CVS42_RS00630 4d54e73ea966403be1411931d4fa9a02 442 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 137 1.1E-7 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CVS42_RS14465 a2486070741e169fa763d1ec0f33b833 438 Gene3D G3DSA:2.70.50.60 286 428 3.3E-25 T 29-03-2018 CVS42_RS14465 a2486070741e169fa763d1ec0f33b833 438 Pfam PF14524 Wzt C-terminal domain 295 428 7.9E-23 T 29-03-2018 IPR029439 Wzt, C-terminal CVS42_RS14465 a2486070741e169fa763d1ec0f33b833 438 SMART SM00382 50 231 3.2E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS14465 a2486070741e169fa763d1ec0f33b833 438 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS14465 a2486070741e169fa763d1ec0f33b833 438 SUPERFAMILY SSF52540 38 237 3.88E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS14465 a2486070741e169fa763d1ec0f33b833 438 Pfam PF00005 ABC transporter 41 173 3.6E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS14465 a2486070741e169fa763d1ec0f33b833 438 Gene3D G3DSA:3.40.50.300 2 285 2.3E-48 T 29-03-2018 CVS42_RS18125 2b6a36b6d8587c0872ca1e7d8d5a4e27 167 Pfam PF12019 Type II transport protein GspH 42 156 2.1E-17 T 29-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 CVS42_RS18125 2b6a36b6d8587c0872ca1e7d8d5a4e27 167 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.2E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS18125 2b6a36b6d8587c0872ca1e7d8d5a4e27 167 ProSitePatterns PS00018 EF-hand calcium-binding domain. 87 99 - T 29-03-2018 IPR018247 EF-Hand 1, calcium-binding site CVS42_RS18125 2b6a36b6d8587c0872ca1e7d8d5a4e27 167 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 25 2.3E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS18125 2b6a36b6d8587c0872ca1e7d8d5a4e27 167 SUPERFAMILY SSF54523 7 142 3.22E-19 T 29-03-2018 CVS42_RS18125 2b6a36b6d8587c0872ca1e7d8d5a4e27 167 Gene3D G3DSA:3.30.700.10 7 164 1.4E-11 T 29-03-2018 CVS42_RS18125 2b6a36b6d8587c0872ca1e7d8d5a4e27 167 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS01320 ae19bdfdb81fcffac0a4d4b61b0864ca 254 SUPERFAMILY SSF47413 10 73 6.26E-9 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS01320 ae19bdfdb81fcffac0a4d4b61b0864ca 254 Gene3D G3DSA:1.10.10.10 2 33 5.7E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS01320 ae19bdfdb81fcffac0a4d4b61b0864ca 254 SMART SM00530 14 68 0.0044 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS01320 ae19bdfdb81fcffac0a4d4b61b0864ca 254 Gene3D G3DSA:3.30.1190.10 34 94 5.5E-5 T 29-03-2018 CVS42_RS01320 ae19bdfdb81fcffac0a4d4b61b0864ca 254 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 15 74 3.8E-9 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS01320 ae19bdfdb81fcffac0a4d4b61b0864ca 254 Gene3D G3DSA:1.10.10.10 97 151 0.0067 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18380 36285db97a52888b77c7e75e5da40cf5 318 SUPERFAMILY SSF53850 90 299 3.26E-49 T 29-03-2018 CVS42_RS18380 36285db97a52888b77c7e75e5da40cf5 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.3E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS18380 36285db97a52888b77c7e75e5da40cf5 318 Gene3D G3DSA:3.40.190.10 89 176 2.7E-16 T 29-03-2018 CVS42_RS18380 36285db97a52888b77c7e75e5da40cf5 318 Gene3D G3DSA:3.40.190.10 177 265 3.1E-29 T 29-03-2018 CVS42_RS18380 36285db97a52888b77c7e75e5da40cf5 318 SUPERFAMILY SSF46785 5 89 2.89E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18380 36285db97a52888b77c7e75e5da40cf5 318 Pfam PF03466 LysR substrate binding domain 89 295 3.5E-47 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS18380 36285db97a52888b77c7e75e5da40cf5 318 Gene3D G3DSA:1.10.10.10 3 85 6.1E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 Pfam PF00072 Response regulator receiver domain 526 635 2.8E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 506 7.6E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 464 7.6E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 450 7.6E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 487 7.6E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 SMART SM00448 524 636 1.4E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 Gene3D G3DSA:3.30.450.20 83 279 8.5E-25 T 29-03-2018 CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 SUPERFAMILY SSF55874 336 506 4.85E-41 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 Gene3D G3DSA:1.20.120.160 631 759 5.0E-16 T 29-03-2018 CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 Pfam PF08448 PAS fold 164 271 1.4E-15 T 29-03-2018 IPR013656 PAS fold-4 CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 SUPERFAMILY SSF52172 521 641 1.71E-27 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 SMART SM00387 394 509 4.1E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 Gene3D G3DSA:1.10.287.130 280 343 7.2E-17 T 29-03-2018 CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 SMART SM00091 155 221 3.1E-5 T 29-03-2018 IPR000014 PAS domain CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 4.8E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 SUPERFAMILY SSF47226 658 768 8.37E-25 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 Gene3D G3DSA:1.10.287.970 3 82 8.2E-36 T 29-03-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 Pfam PF01627 Hpt domain 682 753 1.1E-10 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 PIRSF PIRSF003182 1 770 0.0 T 29-03-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 Gene3D G3DSA:3.30.565.10 351 512 1.6E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 SUPERFAMILY SSF55785 140 267 8.03E-21 T 29-03-2018 IPR000014 PAS domain CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 506 1.4E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 SMART SM00388 282 347 5.1E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 1.4E-16 T 29-03-2018 IPR000014 PAS domain CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 SUPERFAMILY SSF47384 269 347 2.35E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 SMART SM00073 671 768 2.2E-6 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS17345 b0cb2d0babbf837d6d4751313315ca92 770 Gene3D G3DSA:3.40.50.2300 513 630 3.8E-27 T 29-03-2018 CVS42_RS19420 3b5b57299413c79b1f21e883e5fe630e 617 Gene3D G3DSA:3.55.50.10 98 189 5.3E-28 T 29-03-2018 CVS42_RS19420 3b5b57299413c79b1f21e883e5fe630e 617 SUPERFAMILY SSF69255 362 449 6.54E-33 T 29-03-2018 CVS42_RS19420 3b5b57299413c79b1f21e883e5fe630e 617 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 501 6.1E-148 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CVS42_RS19420 3b5b57299413c79b1f21e883e5fe630e 617 SUPERFAMILY SSF69279 189 363 5.27E-40 T 29-03-2018 CVS42_RS19420 3b5b57299413c79b1f21e883e5fe630e 617 Gene3D G3DSA:2.40.50.230 368 450 2.5E-35 T 29-03-2018 IPR006531 Gp5 N-terminal CVS42_RS19420 3b5b57299413c79b1f21e883e5fe630e 617 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 9 519 9.8E-201 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CVS42_RS19420 3b5b57299413c79b1f21e883e5fe630e 617 SUPERFAMILY SSF69349 440 617 3.45E-42 T 29-03-2018 CVS42_RS19420 3b5b57299413c79b1f21e883e5fe630e 617 Pfam PF05954 Phage late control gene D protein (GPD) 29 327 6.0E-85 T 29-03-2018 CVS42_RS19420 3b5b57299413c79b1f21e883e5fe630e 617 SUPERFAMILY SSF69279 14 185 2.27E-54 T 29-03-2018 CVS42_RS21570 d63c0961864d7db855513502ea3571a1 258 SUPERFAMILY SSF53448 3 143 7.29E-27 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS21570 d63c0961864d7db855513502ea3571a1 258 Pfam PF00535 Glycosyl transferase family 2 9 131 4.0E-18 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CVS42_RS21570 d63c0961864d7db855513502ea3571a1 258 Gene3D G3DSA:3.90.550.10 2 212 1.4E-24 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS14510 4feb1d3168ef08e6fe967c292dc8691c 131 Gene3D G3DSA:3.30.700.10 6 130 1.8E-6 T 29-03-2018 CVS42_RS14510 4feb1d3168ef08e6fe967c292dc8691c 131 SUPERFAMILY SSF54523 6 120 5.73E-8 T 29-03-2018 CVS42_RS14510 4feb1d3168ef08e6fe967c292dc8691c 131 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.0E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS14510 4feb1d3168ef08e6fe967c292dc8691c 131 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 25 1.7E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS12445 24771d2426ab1b353691a128aa6d9d43 396 Gene3D G3DSA:3.90.1150.10 1 88 3.0E-20 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS12445 24771d2426ab1b353691a128aa6d9d43 396 Pfam PF00155 Aminotransferase class I and II 27 392 2.2E-80 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CVS42_RS12445 24771d2426ab1b353691a128aa6d9d43 396 Gene3D G3DSA:3.90.1150.10 300 396 1.8E-29 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS12445 24771d2426ab1b353691a128aa6d9d43 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CVS42_RS12445 24771d2426ab1b353691a128aa6d9d43 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 2.5E-38 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CVS42_RS12445 24771d2426ab1b353691a128aa6d9d43 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 2.5E-38 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CVS42_RS12445 24771d2426ab1b353691a128aa6d9d43 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 2.5E-38 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CVS42_RS12445 24771d2426ab1b353691a128aa6d9d43 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 2.5E-38 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CVS42_RS12445 24771d2426ab1b353691a128aa6d9d43 396 SUPERFAMILY SSF53383 1 396 2.9E-113 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS12445 24771d2426ab1b353691a128aa6d9d43 396 Gene3D G3DSA:3.40.640.10 89 299 1.5E-30 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS18235 05dcb8b95c8a2762b66afe5a4224b1c3 458 Gene3D G3DSA:1.20.120.140 1 91 1.2E-30 T 29-03-2018 CVS42_RS18235 05dcb8b95c8a2762b66afe5a4224b1c3 458 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 4.0E-22 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CVS42_RS18235 05dcb8b95c8a2762b66afe5a4224b1c3 458 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 1.8E-76 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CVS42_RS18235 05dcb8b95c8a2762b66afe5a4224b1c3 458 SUPERFAMILY SSF47446 298 431 9.27E-46 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CVS42_RS18235 05dcb8b95c8a2762b66afe5a4224b1c3 458 SMART SM00962 100 296 1.1E-117 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CVS42_RS18235 05dcb8b95c8a2762b66afe5a4224b1c3 458 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 440 34.612 T 29-03-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 CVS42_RS18235 05dcb8b95c8a2762b66afe5a4224b1c3 458 SMART SM00382 99 247 5.1E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS18235 05dcb8b95c8a2762b66afe5a4224b1c3 458 SUPERFAMILY SSF52540 42 352 2.7E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS18235 05dcb8b95c8a2762b66afe5a4224b1c3 458 Pfam PF02978 Signal peptide binding domain 329 427 7.5E-33 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CVS42_RS18235 05dcb8b95c8a2762b66afe5a4224b1c3 458 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CVS42_RS18235 05dcb8b95c8a2762b66afe5a4224b1c3 458 Gene3D G3DSA:1.10.260.30 328 432 5.4E-38 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CVS42_RS18235 05dcb8b95c8a2762b66afe5a4224b1c3 458 Gene3D G3DSA:1.20.120.140 211 310 2.2E-32 T 29-03-2018 CVS42_RS18235 05dcb8b95c8a2762b66afe5a4224b1c3 458 Gene3D G3DSA:3.40.50.300 99 210 7.3E-19 T 29-03-2018 CVS42_RS18235 05dcb8b95c8a2762b66afe5a4224b1c3 458 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.9E-181 T 29-03-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CVS42_RS18235 05dcb8b95c8a2762b66afe5a4224b1c3 458 SMART SM00963 1 86 1.6E-37 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CVS42_RS21900 4d436762b7038461417ada0bee597acb 421 SUPERFAMILY SSF52540 90 371 8.15E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS21900 4d436762b7038461417ada0bee597acb 421 Gene3D G3DSA:1.10.720.10 1 43 2.9E-11 T 29-03-2018 CVS42_RS21900 4d436762b7038461417ada0bee597acb 421 SMART SM00959 5 47 2.6E-14 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CVS42_RS21900 4d436762b7038461417ada0bee597acb 421 SMART SM00382 170 356 1.1E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS21900 4d436762b7038461417ada0bee597acb 421 Gene3D G3DSA:3.40.50.300 129 419 1.8E-57 T 29-03-2018 CVS42_RS21900 4d436762b7038461417ada0bee597acb 421 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 250.435 T 29-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CVS42_RS21900 4d436762b7038461417ada0bee597acb 421 SUPERFAMILY SSF50249 48 125 4.71E-29 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS21900 4d436762b7038461417ada0bee597acb 421 Gene3D G3DSA:2.40.50.140 49 116 4.9E-31 T 29-03-2018 CVS42_RS21900 4d436762b7038461417ada0bee597acb 421 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 3.5E-14 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CVS42_RS21900 4d436762b7038461417ada0bee597acb 421 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 5.9E-219 T 29-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CVS42_RS21900 4d436762b7038461417ada0bee597acb 421 SMART SM00357 52 118 2.8E-19 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CVS42_RS21900 4d436762b7038461417ada0bee597acb 421 SUPERFAMILY SSF68912 1 46 1.49E-10 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CVS42_RS21900 4d436762b7038461417ada0bee597acb 421 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 8.9E-32 T 29-03-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 CVS42_RS21900 4d436762b7038461417ada0bee597acb 421 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 7.3E-23 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS02180 21f5b152e84790fbd10177365cd61bc5 195 Gene3D G3DSA:3.40.50.1820 1 194 8.8E-16 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS02180 21f5b152e84790fbd10177365cd61bc5 195 SUPERFAMILY SSF53474 4 193 1.59E-16 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS02180 21f5b152e84790fbd10177365cd61bc5 195 Pfam PF05728 Uncharacterised protein family (UPF0227) 5 193 2.9E-55 T 29-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CVS42_RS13565 a3b8cc7299760527c043cfb434443221 357 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 210 345 1.8E-20 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CVS42_RS13565 a3b8cc7299760527c043cfb434443221 357 Gene3D G3DSA:1.10.530.10 195 347 2.1E-33 T 29-03-2018 CVS42_RS13565 a3b8cc7299760527c043cfb434443221 357 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 15 346 2.4E-82 T 29-03-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 CVS42_RS13565 a3b8cc7299760527c043cfb434443221 357 SMART SM00047 189 353 4.5E-37 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CVS42_RS13565 a3b8cc7299760527c043cfb434443221 357 Pfam PF10135 Rod binding protein 55 105 5.5E-13 T 29-03-2018 IPR019301 Flagellar protein FlgJ, N-terminal CVS42_RS00130 44f900a7900b40ada348ec58408826b4 175 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 172 26.113 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CVS42_RS00130 44f900a7900b40ada348ec58408826b4 175 PIRSF PIRSF001296 1 175 5.5E-51 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CVS42_RS00130 44f900a7900b40ada348ec58408826b4 175 Pfam PF02669 K+-transporting ATPase, c chain 3 170 1.5E-49 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CVS42_RS13665 40c4c2799e60763a13a151738ed1937a 217 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 47 206 1.9E-33 T 29-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CVS42_RS13665 40c4c2799e60763a13a151738ed1937a 217 Gene3D G3DSA:3.20.20.70 1 217 2.2E-52 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS13665 40c4c2799e60763a13a151738ed1937a 217 SUPERFAMILY SSF51569 1 215 3.14E-60 T 29-03-2018 CVS42_RS13665 40c4c2799e60763a13a151738ed1937a 217 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 1.9E-79 T 29-03-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CVS42_RS13665 40c4c2799e60763a13a151738ed1937a 217 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CVS42_RS09450 9906e1e99e7c0e91af8d9d9053f66674 370 Pfam PF00570 HRDC domain 211 277 1.1E-12 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CVS42_RS09450 9906e1e99e7c0e91af8d9d9053f66674 370 Gene3D G3DSA:1.10.150.80 193 291 1.2E-18 T 29-03-2018 CVS42_RS09450 9906e1e99e7c0e91af8d9d9053f66674 370 Gene3D G3DSA:3.30.420.10 1 192 3.3E-34 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS09450 9906e1e99e7c0e91af8d9d9053f66674 370 SUPERFAMILY SSF47819 190 299 2.8E-28 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CVS42_RS09450 9906e1e99e7c0e91af8d9d9053f66674 370 SUPERFAMILY SSF47819 294 369 1.08E-18 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CVS42_RS09450 9906e1e99e7c0e91af8d9d9053f66674 370 SUPERFAMILY SSF53098 1 207 1.08E-56 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS09450 9906e1e99e7c0e91af8d9d9053f66674 370 SMART SM00474 3 169 8.7E-34 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CVS42_RS09450 9906e1e99e7c0e91af8d9d9053f66674 370 TIGRFAM TIGR01388 rnd: ribonuclease D 5 368 3.4E-113 T 29-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CVS42_RS09450 9906e1e99e7c0e91af8d9d9053f66674 370 SMART SM00341 208 287 4.3E-6 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CVS42_RS09450 9906e1e99e7c0e91af8d9d9053f66674 370 Pfam PF01612 3'-5' exonuclease 3 168 3.7E-32 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CVS42_RS09450 9906e1e99e7c0e91af8d9d9053f66674 370 Hamap MF_01899 Ribonuclease D [rnd]. 3 370 43.03 T 29-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CVS42_RS22070 d6ad6ace1d20b02bdfc635195ba83af0 610 Pfam PF13522 Glutamine amidotransferase domain 63 182 1.2E-23 T 29-03-2018 CVS42_RS22070 d6ad6ace1d20b02bdfc635195ba83af0 610 SUPERFAMILY SSF56235 2 232 8.58E-76 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS22070 d6ad6ace1d20b02bdfc635195ba83af0 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 5.7E-262 T 29-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CVS42_RS22070 d6ad6ace1d20b02bdfc635195ba83af0 610 Gene3D G3DSA:3.40.50.10490 460 608 1.0E-50 T 29-03-2018 CVS42_RS22070 d6ad6ace1d20b02bdfc635195ba83af0 610 Gene3D G3DSA:3.40.50.10490 240 459 2.4E-62 T 29-03-2018 CVS42_RS22070 d6ad6ace1d20b02bdfc635195ba83af0 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.777 T 29-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CVS42_RS22070 d6ad6ace1d20b02bdfc635195ba83af0 610 Pfam PF01380 SIS domain 292 418 2.9E-34 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CVS42_RS22070 d6ad6ace1d20b02bdfc635195ba83af0 610 Pfam PF01380 SIS domain 463 592 2.8E-26 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CVS42_RS22070 d6ad6ace1d20b02bdfc635195ba83af0 610 Gene3D G3DSA:3.60.20.10 2 239 7.9E-70 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS22070 d6ad6ace1d20b02bdfc635195ba83af0 610 SUPERFAMILY SSF53697 245 610 2.14E-112 T 29-03-2018 CVS42_RS16880 ebc6ad508c22b445588c3055f56b0239 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 89 3.3E-7 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CVS42_RS16880 ebc6ad508c22b445588c3055f56b0239 338 SMART SM00829 13 331 5.8E-11 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CVS42_RS16880 ebc6ad508c22b445588c3055f56b0239 338 Gene3D G3DSA:3.90.180.10 1 137 1.0E-31 T 29-03-2018 CVS42_RS16880 ebc6ad508c22b445588c3055f56b0239 338 Pfam PF13602 Zinc-binding dehydrogenase 191 331 1.3E-18 T 29-03-2018 CVS42_RS16880 ebc6ad508c22b445588c3055f56b0239 338 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 332 9.5E-120 T 29-03-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 CVS42_RS16880 ebc6ad508c22b445588c3055f56b0239 338 SUPERFAMILY SSF51735 117 284 3.95E-34 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS16880 ebc6ad508c22b445588c3055f56b0239 338 SUPERFAMILY SSF50129 13 149 5.78E-31 T 29-03-2018 IPR011032 GroES-like CVS42_RS16880 ebc6ad508c22b445588c3055f56b0239 338 Gene3D G3DSA:3.40.50.720 138 298 1.4E-23 T 29-03-2018 CVS42_RS16655 7867578b1f8a02826fc4e08dfeb2f9d3 281 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CVS42_RS16655 7867578b1f8a02826fc4e08dfeb2f9d3 281 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CVS42_RS16655 7867578b1f8a02826fc4e08dfeb2f9d3 281 SUPERFAMILY SSF51717 6 271 1.57E-103 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CVS42_RS16655 7867578b1f8a02826fc4e08dfeb2f9d3 281 Pfam PF00809 Pterin binding enzyme 18 257 2.0E-85 T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CVS42_RS16655 7867578b1f8a02826fc4e08dfeb2f9d3 281 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 268 1.1E-99 T 29-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CVS42_RS16655 7867578b1f8a02826fc4e08dfeb2f9d3 281 Gene3D G3DSA:3.20.20.20 2 275 2.3E-106 T 29-03-2018 CVS42_RS14900 711fc7b94fe1c76d92daf30a8d2f347d 429 Gene3D G3DSA:3.90.1150.10 178 262 8.8E-4 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS14900 711fc7b94fe1c76d92daf30a8d2f347d 429 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 13 425 1.2E-173 T 29-03-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 CVS42_RS14900 711fc7b94fe1c76d92daf30a8d2f347d 429 Pfam PF00202 Aminotransferase class-III 26 423 5.7E-130 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS14900 711fc7b94fe1c76d92daf30a8d2f347d 429 Gene3D G3DSA:3.90.1150.10 1 159 2.9E-45 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS14900 711fc7b94fe1c76d92daf30a8d2f347d 429 SUPERFAMILY SSF53383 25 425 1.16E-134 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS14900 711fc7b94fe1c76d92daf30a8d2f347d 429 PIRSF PIRSF000521 16 134 3.1E-5 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS14900 711fc7b94fe1c76d92daf30a8d2f347d 429 PIRSF PIRSF000521 126 427 5.4E-41 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS14900 711fc7b94fe1c76d92daf30a8d2f347d 429 Gene3D G3DSA:3.90.1150.10 263 428 1.3E-49 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS14900 711fc7b94fe1c76d92daf30a8d2f347d 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS00380 38cfd797f554d246f84b2863646e922d 267 SUPERFAMILY SSF53681 3 105 3.6E-32 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS00380 38cfd797f554d246f84b2863646e922d 267 Gene3D G3DSA:3.40.50.1860 111 266 2.9E-28 T 29-03-2018 CVS42_RS00380 38cfd797f554d246f84b2863646e922d 267 TIGRFAM TIGR00067 glut_race: glutamate racemase 4 227 2.6E-67 T 29-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS00380 38cfd797f554d246f84b2863646e922d 267 Pfam PF01177 Asp/Glu/Hydantoin racemase 4 213 1.8E-30 T 29-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS00380 38cfd797f554d246f84b2863646e922d 267 Gene3D G3DSA:3.40.50.1860 21 110 1.1E-20 T 29-03-2018 CVS42_RS00380 38cfd797f554d246f84b2863646e922d 267 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 69 77 - T 29-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS00380 38cfd797f554d246f84b2863646e922d 267 Hamap MF_00258 Glutamate racemase [murI]. 2 261 32.676 T 29-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS00380 38cfd797f554d246f84b2863646e922d 267 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 29-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS00380 38cfd797f554d246f84b2863646e922d 267 SUPERFAMILY SSF53681 107 252 1.4E-30 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS07465 ca5c77a2ec335fa2d6cd6ea5d8286b6d 524 Gene3D G3DSA:3.40.50.720 379 523 1.3E-14 T 29-03-2018 CVS42_RS07465 ca5c77a2ec335fa2d6cd6ea5d8286b6d 524 Gene3D G3DSA:1.20.91.10 210 287 5.4E-4 T 29-03-2018 CVS42_RS07465 ca5c77a2ec335fa2d6cd6ea5d8286b6d 524 SUPERFAMILY SSF51735 388 517 9.7E-16 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS07465 ca5c77a2ec335fa2d6cd6ea5d8286b6d 524 Pfam PF02254 TrkA-N domain 388 504 1.0E-18 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CVS42_RS07465 ca5c77a2ec335fa2d6cd6ea5d8286b6d 524 Pfam PF00999 Sodium/hydrogen exchanger family 4 346 1.6E-37 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CVS42_RS20810 b85281538cd8ce4e5b05d181b7ac4c4a 466 SMART SM00387 357 466 1.4E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS20810 b85281538cd8ce4e5b05d181b7ac4c4a 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 8.1E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS20810 b85281538cd8ce4e5b05d181b7ac4c4a 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 422 8.1E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS20810 b85281538cd8ce4e5b05d181b7ac4c4a 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 202 216 8.1E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS20810 b85281538cd8ce4e5b05d181b7ac4c4a 466 Gene3D G3DSA:1.10.287.130 236 310 4.6E-15 T 29-03-2018 CVS42_RS20810 b85281538cd8ce4e5b05d181b7ac4c4a 466 SUPERFAMILY SSF47384 231 313 3.14E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS20810 b85281538cd8ce4e5b05d181b7ac4c4a 466 Gene3D G3DSA:3.30.565.10 317 466 1.2E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS20810 b85281538cd8ce4e5b05d181b7ac4c4a 466 SMART SM00388 246 314 4.8E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS20810 b85281538cd8ce4e5b05d181b7ac4c4a 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 312 1.2E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS20810 b85281538cd8ce4e5b05d181b7ac4c4a 466 SUPERFAMILY SSF55874 317 465 4.45E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS20810 b85281538cd8ce4e5b05d181b7ac4c4a 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 465 4.1E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS17370 be7140d821cffef72dc98c076b537f60 299 SUPERFAMILY SSF53850 86 295 1.63E-40 T 29-03-2018 CVS42_RS17370 be7140d821cffef72dc98c076b537f60 299 Pfam PF03466 LysR substrate binding domain 87 291 3.2E-38 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS17370 be7140d821cffef72dc98c076b537f60 299 Gene3D G3DSA:3.40.190.10 92 173 3.9E-12 T 29-03-2018 CVS42_RS17370 be7140d821cffef72dc98c076b537f60 299 Gene3D G3DSA:3.40.190.10 174 262 4.7E-24 T 29-03-2018 CVS42_RS17370 be7140d821cffef72dc98c076b537f60 299 Gene3D G3DSA:1.10.10.10 1 91 1.8E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS17370 be7140d821cffef72dc98c076b537f60 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.8E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS17370 be7140d821cffef72dc98c076b537f60 299 SUPERFAMILY SSF46785 1 86 1.62E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS14220 ef1bc4204bd7e7038f65852ba4f988b3 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 158 2.5E-7 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CVS42_RS14220 ef1bc4204bd7e7038f65852ba4f988b3 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 4 328 5.2E-117 T 29-03-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 CVS42_RS14220 ef1bc4204bd7e7038f65852ba4f988b3 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 56.266 T 29-03-2018 IPR023741 Lipoate-protein ligase A GO:0016979|GO:0018055 KEGG: 00785+6.3.1.20 CVS42_RS14220 ef1bc4204bd7e7038f65852ba4f988b3 338 Gene3D G3DSA:3.30.390.50 250 337 3.4E-22 T 29-03-2018 CVS42_RS14220 ef1bc4204bd7e7038f65852ba4f988b3 338 SUPERFAMILY SSF82649 249 336 1.78E-23 T 29-03-2018 CVS42_RS14220 ef1bc4204bd7e7038f65852ba4f988b3 338 SUPERFAMILY SSF55681 4 247 7.21E-80 T 29-03-2018 CVS42_RS14220 ef1bc4204bd7e7038f65852ba4f988b3 338 Gene3D G3DSA:3.30.930.10 2 249 1.0E-72 T 29-03-2018 CVS42_RS14220 ef1bc4204bd7e7038f65852ba4f988b3 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 333 4.3E-18 T 29-03-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 CVS42_RS15780 c3326682c79639cbed472cfb782674ad 710 SUPERFAMILY SSF55904 567 708 1.1E-42 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CVS42_RS15780 c3326682c79639cbed472cfb782674ad 710 SUPERFAMILY SSF53383 130 562 1.04E-105 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS15780 c3326682c79639cbed472cfb782674ad 710 Gene3D G3DSA:3.90.100.10 595 710 5.5E-34 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CVS42_RS15780 c3326682c79639cbed472cfb782674ad 710 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.5E-43 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CVS42_RS15780 c3326682c79639cbed472cfb782674ad 710 Gene3D G3DSA:3.90.1150.10 425 594 2.3E-55 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS15780 c3326682c79639cbed472cfb782674ad 710 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 7.6E-186 T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CVS42_RS15780 c3326682c79639cbed472cfb782674ad 710 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CVS42_RS15780 c3326682c79639cbed472cfb782674ad 710 PIRSF PIRSF009393 1 710 4.9E-283 T 29-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CVS42_RS15780 c3326682c79639cbed472cfb782674ad 710 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.5E-29 T 29-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CVS42_RS15780 c3326682c79639cbed472cfb782674ad 710 Gene3D G3DSA:3.40.640.10 130 424 1.1E-33 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 Gene3D G3DSA:2.120.10.90 533 893 1.9E-134 T 29-03-2018 CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 4.0E-156 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 SUPERFAMILY SSF101904 533 709 1.19E-65 T 29-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 SUPERFAMILY SSF56719 30 521 1.16E-186 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 Gene3D G3DSA:3.90.199.10 34 285 4.5E-117 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 713 0.0 T 29-03-2018 CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 Gene3D G3DSA:3.90.199.10 286 375 4.4E-10 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 SMART SM00434 11 499 3.0E-300 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 879 24.713 T 29-03-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 831 876 2.0E-11 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 749 775 1.0E-5 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 708 1.0 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 638 2.9E-12 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 8.9E-11 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 782 827 2.5E-14 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 3.7E-10 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 Gene3D G3DSA:1.10.268.10 376 497 3.4E-50 T 29-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS09580 7e92461d3c64dd9ae7b16cdf2fb0584e 915 SUPERFAMILY SSF101904 747 888 2.88E-40 T 29-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CVS42_RS21395 9d6f5cebd1ed8b10a0be0e6089257b55 151 SUPERFAMILY SSF51197 1 144 1.48E-23 T 29-03-2018 CVS42_RS21395 9d6f5cebd1ed8b10a0be0e6089257b55 151 Pfam PF04074 Domain of unknown function (DUF386) 4 141 1.5E-23 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CVS42_RS21395 9d6f5cebd1ed8b10a0be0e6089257b55 151 Gene3D G3DSA:2.60.120.370 1 144 1.8E-20 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CVS42_RS17440 6dd8b8a5373e0e3e019ae624137fc041 323 Gene3D G3DSA:3.40.50.2300 2 272 4.2E-37 T 29-03-2018 CVS42_RS17440 6dd8b8a5373e0e3e019ae624137fc041 323 SMART SM00448 6 117 6.0E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS17440 6dd8b8a5373e0e3e019ae624137fc041 323 SUPERFAMILY SSF52172 4 123 8.97E-36 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS17440 6dd8b8a5373e0e3e019ae624137fc041 323 Pfam PF00072 Response regulator receiver domain 8 115 2.1E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS07650 67d2c0c073946d6469752645e7364934 434 PIRSF PIRSF036388 1 434 7.1E-184 T 29-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CVS42_RS07650 67d2c0c073946d6469752645e7364934 434 Pfam PF12404 Peptidase 5 84 4.0E-29 T 29-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CVS42_RS07650 67d2c0c073946d6469752645e7364934 434 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 279 286 - T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CVS42_RS07650 67d2c0c073946d6469752645e7364934 434 SUPERFAMILY SSF53187 107 431 3.77E-93 T 29-03-2018 CVS42_RS07650 67d2c0c073946d6469752645e7364934 434 Gene3D G3DSA:3.40.630.10 97 434 1.8E-103 T 29-03-2018 CVS42_RS07650 67d2c0c073946d6469752645e7364934 434 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 113 425 8.4E-95 T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CVS42_RS07650 67d2c0c073946d6469752645e7364934 434 PRINTS PR00481 Cytosol aminopeptidase signature 194 211 3.8E-44 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS07650 67d2c0c073946d6469752645e7364934 434 PRINTS PR00481 Cytosol aminopeptidase signature 253 274 3.8E-44 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS07650 67d2c0c073946d6469752645e7364934 434 PRINTS PR00481 Cytosol aminopeptidase signature 275 295 3.8E-44 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS07650 67d2c0c073946d6469752645e7364934 434 PRINTS PR00481 Cytosol aminopeptidase signature 216 237 3.8E-44 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS07650 67d2c0c073946d6469752645e7364934 434 PRINTS PR00481 Cytosol aminopeptidase signature 303 318 3.8E-44 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 SUPERFAMILY SSF55781 128 253 6.76E-11 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 SMART SM00052 721 967 2.2E-105 T 29-03-2018 IPR001633 EAL domain CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 SUPERFAMILY SSF55785 433 545 1.71E-22 T 29-03-2018 IPR000014 PAS domain CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 Pfam PF13426 PAS domain 433 535 5.8E-15 T 29-03-2018 IPR000014 PAS domain CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 Gene3D G3DSA:3.20.20.450 719 978 3.2E-98 T 29-03-2018 IPR001633 EAL domain CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 Gene3D G3DSA:3.30.450.20 423 544 2.4E-23 T 29-03-2018 CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 SMART SM00267 536 711 3.4E-40 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 SMART SM00091 422 488 1.2E-8 T 29-03-2018 IPR000014 PAS domain CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 Gene3D G3DSA:3.30.70.270 545 718 1.3E-45 T 29-03-2018 CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 Pfam PF00563 EAL domain 727 962 1.2E-72 T 29-03-2018 IPR001633 EAL domain CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 SUPERFAMILY SSF55073 552 712 4.24E-36 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 Pfam PF01590 GAF domain 126 252 2.6E-7 T 29-03-2018 IPR003018 GAF domain GO:0005515 CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 426 541 8.5E-21 T 29-03-2018 IPR000014 PAS domain CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 SMART SM00086 494 536 2.6E-4 T 29-03-2018 IPR001610 PAC motif CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 SUPERFAMILY SSF141868 727 974 4.58E-87 T 29-03-2018 IPR001633 EAL domain CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 Gene3D G3DSA:3.30.450.40 272 422 2.9E-9 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 Pfam PF00990 Diguanylate cyclase, GGDEF domain 547 706 4.2E-35 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 Gene3D G3DSA:3.30.450.40 117 254 2.5E-10 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 543 709 1.6E-27 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS13190 d3b71e84645c1adc904412d70cedadf3 978 SUPERFAMILY SSF55781 281 423 1.07E-9 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS16900 28cc48cefc983f3337f3896432b6b591 675 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 496 520 2.5E-6 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS16900 28cc48cefc983f3337f3896432b6b591 675 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 377 399 2.5E-6 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS16900 28cc48cefc983f3337f3896432b6b591 675 Gene3D G3DSA:3.20.20.70 3 365 4.8E-112 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS16900 28cc48cefc983f3337f3896432b6b591 675 SUPERFAMILY SSF51395 4 363 2.31E-113 T 29-03-2018 CVS42_RS16900 28cc48cefc983f3337f3896432b6b591 675 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 1.2E-85 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CVS42_RS16900 28cc48cefc983f3337f3896432b6b591 675 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 621 637 3.4E-17 T 29-03-2018 CVS42_RS16900 28cc48cefc983f3337f3896432b6b591 675 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 3.4E-17 T 29-03-2018 CVS42_RS16900 28cc48cefc983f3337f3896432b6b591 675 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 460 478 3.4E-17 T 29-03-2018 CVS42_RS16900 28cc48cefc983f3337f3896432b6b591 675 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 500 518 3.4E-17 T 29-03-2018 CVS42_RS16900 28cc48cefc983f3337f3896432b6b591 675 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 648 1.5E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS16900 28cc48cefc983f3337f3896432b6b591 675 Gene3D G3DSA:3.50.50.60 480 624 5.1E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS16900 28cc48cefc983f3337f3896432b6b591 675 Gene3D G3DSA:3.50.50.60 625 674 5.6E-4 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS16900 28cc48cefc983f3337f3896432b6b591 675 SUPERFAMILY SSF51905 373 608 9.45E-41 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS16900 28cc48cefc983f3337f3896432b6b591 675 Gene3D G3DSA:3.40.50.720 366 479 4.1E-22 T 29-03-2018 CVS42_RS22105 fb99550dac50b72725c4aeb247225ca9 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CVS42_RS22105 fb99550dac50b72725c4aeb247225ca9 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 263 296 5.2E-6 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS22105 fb99550dac50b72725c4aeb247225ca9 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.2E-6 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS22105 fb99550dac50b72725c4aeb247225ca9 453 Gene3D G3DSA:3.90.550.10 1 238 1.2E-52 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS22105 fb99550dac50b72725c4aeb247225ca9 453 Gene3D G3DSA:2.160.10.10 312 445 6.4E-34 T 29-03-2018 CVS42_RS22105 fb99550dac50b72725c4aeb247225ca9 453 SUPERFAMILY SSF53448 1 249 3.96E-67 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS22105 fb99550dac50b72725c4aeb247225ca9 453 Gene3D G3DSA:2.160.10.10 239 311 7.3E-14 T 29-03-2018 CVS42_RS22105 fb99550dac50b72725c4aeb247225ca9 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 271 299 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CVS42_RS22105 fb99550dac50b72725c4aeb247225ca9 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 3.1E-199 T 29-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CVS42_RS22105 fb99550dac50b72725c4aeb247225ca9 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.704 T 29-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CVS42_RS22105 fb99550dac50b72725c4aeb247225ca9 453 Pfam PF12804 MobA-like NTP transferase domain 5 129 2.7E-24 T 29-03-2018 IPR025877 MobA-like NTP transferase CVS42_RS22105 fb99550dac50b72725c4aeb247225ca9 453 SUPERFAMILY SSF51161 251 435 2.01E-48 T 29-03-2018 IPR011004 Trimeric LpxA-like CVS42_RS18055 cdc7369984926a6169b87ebad64572e4 169 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 153 5.9E-60 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CVS42_RS18055 cdc7369984926a6169b87ebad64572e4 169 PIRSF PIRSF006160 1 162 6.5E-64 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CVS42_RS18055 cdc7369984926a6169b87ebad64572e4 169 Gene3D G3DSA:3.30.1360.80 3 161 1.6E-62 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CVS42_RS18055 cdc7369984926a6169b87ebad64572e4 169 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 34.607 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CVS42_RS18055 cdc7369984926a6169b87ebad64572e4 169 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 2.0E-68 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CVS42_RS18055 cdc7369984926a6169b87ebad64572e4 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.6E-49 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CVS42_RS18055 cdc7369984926a6169b87ebad64572e4 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.6E-49 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CVS42_RS18055 cdc7369984926a6169b87ebad64572e4 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.6E-49 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CVS42_RS18055 cdc7369984926a6169b87ebad64572e4 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.6E-49 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CVS42_RS18055 cdc7369984926a6169b87ebad64572e4 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.6E-49 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CVS42_RS18055 cdc7369984926a6169b87ebad64572e4 169 SUPERFAMILY SSF63411 4 162 1.37E-64 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CVS42_RS17035 cd29170d00d2438edc9cef44226ec724 471 Gene3D G3DSA:3.40.50.620 3 115 5.0E-40 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS17035 cd29170d00d2438edc9cef44226ec724 471 Gene3D G3DSA:3.40.50.620 116 231 1.1E-28 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS17035 cd29170d00d2438edc9cef44226ec724 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS17035 cd29170d00d2438edc9cef44226ec724 471 Gene3D G3DSA:1.10.8.70 318 361 1.8E-11 T 29-03-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CVS42_RS17035 cd29170d00d2438edc9cef44226ec724 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 2.5E-118 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CVS42_RS17035 cd29170d00d2438edc9cef44226ec724 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 2.2E-27 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CVS42_RS17035 cd29170d00d2438edc9cef44226ec724 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 2.2E-27 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CVS42_RS17035 cd29170d00d2438edc9cef44226ec724 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 2.2E-27 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CVS42_RS17035 cd29170d00d2438edc9cef44226ec724 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 2.2E-27 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CVS42_RS17035 cd29170d00d2438edc9cef44226ec724 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 2.2E-27 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CVS42_RS17035 cd29170d00d2438edc9cef44226ec724 471 SUPERFAMILY SSF52374 2 298 1.74E-113 T 29-03-2018 CVS42_RS17035 cd29170d00d2438edc9cef44226ec724 471 SUPERFAMILY SSF48163 299 461 7.32E-47 T 29-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CVS42_RS17035 cd29170d00d2438edc9cef44226ec724 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 459 6.4E-198 T 29-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CVS42_RS17035 cd29170d00d2438edc9cef44226ec724 471 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 33.176 T 29-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CVS42_RS17035 cd29170d00d2438edc9cef44226ec724 471 Gene3D G3DSA:1.10.1160.10 232 314 2.4E-35 T 29-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CVS42_RS17035 cd29170d00d2438edc9cef44226ec724 471 Gene3D G3DSA:1.10.10.350 366 471 4.8E-25 T 29-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CVS42_RS11395 b0ef375c7a93725c926cdf2cf6100412 424 SUPERFAMILY SSF57716 13 48 3.71E-12 T 29-03-2018 CVS42_RS11395 b0ef375c7a93725c926cdf2cf6100412 424 Gene3D G3DSA:1.10.8.60 317 408 2.0E-32 T 29-03-2018 CVS42_RS11395 b0ef375c7a93725c926cdf2cf6100412 424 Gene3D G3DSA:3.40.50.300 56 315 2.6E-68 T 29-03-2018 CVS42_RS11395 b0ef375c7a93725c926cdf2cf6100412 424 SUPERFAMILY SSF52540 62 403 1.37E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11395 b0ef375c7a93725c926cdf2cf6100412 424 Pfam PF06689 ClpX C4-type zinc finger 13 50 6.5E-21 T 29-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CVS42_RS11395 b0ef375c7a93725c926cdf2cf6100412 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 6.4E-49 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CVS42_RS11395 b0ef375c7a93725c926cdf2cf6100412 424 SMART SM01086 317 412 6.4E-34 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CVS42_RS11395 b0ef375c7a93725c926cdf2cf6100412 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 415 53.477 T 29-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CVS42_RS11395 b0ef375c7a93725c926cdf2cf6100412 424 SMART SM00382 111 333 1.1E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS11395 b0ef375c7a93725c926cdf2cf6100412 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 389 6.7E-17 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CVS42_RS11395 b0ef375c7a93725c926cdf2cf6100412 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 11 411 6.0E-210 T 29-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CVS42_RS11395 b0ef375c7a93725c926cdf2cf6100412 424 SMART SM00994 12 51 7.4E-25 T 29-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CVS42_RS20820 f38dd1a6f4528bc647ebdec81d005ab0 191 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 128 6.1E-14 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CVS42_RS20820 f38dd1a6f4528bc647ebdec81d005ab0 191 Gene3D G3DSA:3.30.70.560 2 191 5.3E-23 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CVS42_RS20820 f38dd1a6f4528bc647ebdec81d005ab0 191 SUPERFAMILY SSF55083 3 101 9.81E-20 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CVS42_RS03190 b9e9a072d05832ccb93b4d2c3a4531a5 175 Gene3D G3DSA:3.40.250.10 38 175 7.1E-25 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS03190 b9e9a072d05832ccb93b4d2c3a4531a5 175 ProSitePatterns PS00380 Rhodanese signature 1. 80 91 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CVS42_RS03190 b9e9a072d05832ccb93b4d2c3a4531a5 175 Pfam PF00581 Rhodanese-like domain 55 167 2.3E-16 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS03190 b9e9a072d05832ccb93b4d2c3a4531a5 175 SUPERFAMILY SSF52821 48 173 2.88E-24 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS03190 b9e9a072d05832ccb93b4d2c3a4531a5 175 SMART SM00450 54 171 6.0E-13 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS11700 081ca62a16cec4e3f1a83a542a641d83 163 Gene3D G3DSA:1.10.10.10 5 62 5.1E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS11700 081ca62a16cec4e3f1a83a542a641d83 163 SUPERFAMILY SSF54909 73 156 1.88E-21 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CVS42_RS11700 081ca62a16cec4e3f1a83a542a641d83 163 Gene3D G3DSA:3.30.70.920 63 157 1.2E-27 T 29-03-2018 CVS42_RS11700 081ca62a16cec4e3f1a83a542a641d83 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 9.0E-23 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CVS42_RS11700 081ca62a16cec4e3f1a83a542a641d83 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 9.0E-23 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CVS42_RS11700 081ca62a16cec4e3f1a83a542a641d83 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 9.0E-23 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CVS42_RS11700 081ca62a16cec4e3f1a83a542a641d83 163 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CVS42_RS11700 081ca62a16cec4e3f1a83a542a641d83 163 SUPERFAMILY SSF46785 11 69 3.22E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS11700 081ca62a16cec4e3f1a83a542a641d83 163 SMART SM00344 11 120 1.4E-54 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CVS42_RS11700 081ca62a16cec4e3f1a83a542a641d83 163 Pfam PF01037 Lrp/AsnC ligand binding domain 77 151 4.3E-24 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CVS42_RS11700 081ca62a16cec4e3f1a83a542a641d83 163 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 58 5.8E-22 T 29-03-2018 CVS42_RS11535 53b0854a6bede34ca21c87f9f691de0e 329 Gene3D G3DSA:3.40.50.20 1 115 1.0E-24 T 29-03-2018 CVS42_RS11535 53b0854a6bede34ca21c87f9f691de0e 329 SUPERFAMILY SSF52440 4 114 6.62E-24 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CVS42_RS11535 53b0854a6bede34ca21c87f9f691de0e 329 Pfam PF01820 D-ala D-ala ligase N-terminus 6 105 2.1E-14 T 29-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS11535 53b0854a6bede34ca21c87f9f691de0e 329 Gene3D G3DSA:3.30.470.20 200 329 1.1E-29 T 29-03-2018 CVS42_RS11535 53b0854a6bede34ca21c87f9f691de0e 329 PIRSF PIRSF039102 1 329 1.1E-75 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS11535 53b0854a6bede34ca21c87f9f691de0e 329 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 328 6.7E-90 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS11535 53b0854a6bede34ca21c87f9f691de0e 329 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 82 93 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS11535 53b0854a6bede34ca21c87f9f691de0e 329 SUPERFAMILY SSF56059 115 326 1.77E-45 T 29-03-2018 CVS42_RS11535 53b0854a6bede34ca21c87f9f691de0e 329 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 329 32.745 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS11535 53b0854a6bede34ca21c87f9f691de0e 329 Pfam PF07478 D-ala D-ala ligase C-terminus 124 325 3.9E-52 T 29-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS11535 53b0854a6bede34ca21c87f9f691de0e 329 Gene3D G3DSA:3.30.1490.20 116 199 2.7E-13 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CVS42_RS11535 53b0854a6bede34ca21c87f9f691de0e 329 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 271 299 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS05510 7f1c70dd406c31fe9f38905bfb42d979 257 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 181 196 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS05510 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 125 139 2.7E-24 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CVS42_RS05510 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 113 125 2.7E-24 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CVS42_RS05510 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 242 252 2.7E-24 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CVS42_RS05510 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 153 165 2.7E-24 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CVS42_RS05510 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 53 62 2.7E-24 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CVS42_RS05510 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 174 186 2.7E-24 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CVS42_RS05510 7f1c70dd406c31fe9f38905bfb42d979 257 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 229 241 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS05510 7f1c70dd406c31fe9f38905bfb42d979 257 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 57 252 9.5E-85 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CVS42_RS05510 7f1c70dd406c31fe9f38905bfb42d979 257 Pfam PF00813 FliP family 57 248 1.0E-79 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS05510 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 181 201 1.2E-67 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS05510 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 74 94 1.2E-67 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS05510 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 94 113 1.2E-67 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS05510 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 226 251 1.2E-67 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS05510 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 55 74 1.2E-67 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS05510 7f1c70dd406c31fe9f38905bfb42d979 257 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 202 223 1.2E-67 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CVS42_RS03445 377afd9194b44e0de78702d2b488ce3a 158 Pfam PF02542 YgbB family 2 155 9.0E-63 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CVS42_RS03445 377afd9194b44e0de78702d2b488ce3a 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 29-03-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CVS42_RS03445 377afd9194b44e0de78702d2b488ce3a 158 SUPERFAMILY SSF69765 1 157 3.4E-64 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CVS42_RS03445 377afd9194b44e0de78702d2b488ce3a 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 7.6E-67 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CVS42_RS03445 377afd9194b44e0de78702d2b488ce3a 158 Gene3D G3DSA:3.30.1330.50 1 158 8.1E-70 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CVS42_RS03445 377afd9194b44e0de78702d2b488ce3a 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.307 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CVS42_RS18480 46a65d04ee9848a9e95fc0953efae6ee 398 Gene3D G3DSA:3.90.1150.10 301 396 1.3E-29 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS18480 46a65d04ee9848a9e95fc0953efae6ee 398 Gene3D G3DSA:3.40.640.10 80 299 7.5E-31 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS18480 46a65d04ee9848a9e95fc0953efae6ee 398 Pfam PF00155 Aminotransferase class I and II 27 391 6.8E-82 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CVS42_RS18480 46a65d04ee9848a9e95fc0953efae6ee 398 Gene3D G3DSA:3.90.1150.10 1 79 1.2E-13 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS18480 46a65d04ee9848a9e95fc0953efae6ee 398 SUPERFAMILY SSF53383 1 397 2.53E-120 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS18480 46a65d04ee9848a9e95fc0953efae6ee 398 PRINTS PR00799 Aspartate aminotransferase signature 273 298 8.6E-37 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CVS42_RS18480 46a65d04ee9848a9e95fc0953efae6ee 398 PRINTS PR00799 Aspartate aminotransferase signature 341 359 8.6E-37 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CVS42_RS18480 46a65d04ee9848a9e95fc0953efae6ee 398 PRINTS PR00799 Aspartate aminotransferase signature 175 194 8.6E-37 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CVS42_RS18480 46a65d04ee9848a9e95fc0953efae6ee 398 PRINTS PR00799 Aspartate aminotransferase signature 206 218 8.6E-37 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CVS42_RS08840 fab8b2a582f49bad90f2797e9d5ad3b5 848 Gene3D G3DSA:1.20.272.10 243 362 1.5E-14 T 29-03-2018 CVS42_RS08840 fab8b2a582f49bad90f2797e9d5ad3b5 848 SUPERFAMILY SSF52540 33 222 1.09E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS08840 fab8b2a582f49bad90f2797e9d5ad3b5 848 SUPERFAMILY SSF48019 243 361 2.38E-30 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CVS42_RS08840 fab8b2a582f49bad90f2797e9d5ad3b5 848 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 359 2.7E-29 T 29-03-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CVS42_RS08840 fab8b2a582f49bad90f2797e9d5ad3b5 848 SMART SM00382 37 178 2.7E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS08840 fab8b2a582f49bad90f2797e9d5ad3b5 848 Gene3D G3DSA:3.40.50.300 1 166 1.3E-41 T 29-03-2018 CVS42_RS08840 fab8b2a582f49bad90f2797e9d5ad3b5 848 Gene3D G3DSA:1.10.8.60 167 242 7.7E-18 T 29-03-2018 CVS42_RS08840 fab8b2a582f49bad90f2797e9d5ad3b5 848 Pfam PF13177 DNA polymerase III, delta subunit 20 178 9.8E-44 T 29-03-2018 CVS42_RS08840 fab8b2a582f49bad90f2797e9d5ad3b5 848 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 2.3E-131 T 29-03-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CVS42_RS08840 fab8b2a582f49bad90f2797e9d5ad3b5 848 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 714 843 4.3E-34 T 29-03-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS13220 3294123bb3cc03e9597e63049ca8caad 602 Pfam PF08439 Oligopeptidase F 119 183 2.7E-7 T 29-03-2018 IPR013647 Oligopeptidase F, N-terminal domain CVS42_RS13220 3294123bb3cc03e9597e63049ca8caad 602 Gene3D G3DSA:1.10.1370.10 86 598 3.3E-12 T 29-03-2018 CVS42_RS13220 3294123bb3cc03e9597e63049ca8caad 602 Pfam PF01432 Peptidase family M3 200 582 1.3E-20 T 29-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CVS42_RS13220 3294123bb3cc03e9597e63049ca8caad 602 SUPERFAMILY SSF55486 3 588 3.11E-82 T 29-03-2018 CVS42_RS08305 ae6b7e627552190534d05f7baf040ecd 342 Gene3D G3DSA:1.10.8.60 180 289 5.6E-22 T 29-03-2018 CVS42_RS08305 ae6b7e627552190534d05f7baf040ecd 342 SMART SM00382 28 175 2.0E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS08305 ae6b7e627552190534d05f7baf040ecd 342 SUPERFAMILY SSF52540 8 245 1.82E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS08305 ae6b7e627552190534d05f7baf040ecd 342 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CVS42_RS08305 ae6b7e627552190534d05f7baf040ecd 342 Gene3D G3DSA:3.40.50.300 1 179 2.9E-27 T 29-03-2018 CVS42_RS08305 ae6b7e627552190534d05f7baf040ecd 342 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 313 333 7.7E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS08305 ae6b7e627552190534d05f7baf040ecd 342 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 296 313 7.7E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS08305 ae6b7e627552190534d05f7baf040ecd 342 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CVS42_RS08305 ae6b7e627552190534d05f7baf040ecd 342 Gene3D G3DSA:1.10.10.60 290 335 4.9E-11 T 29-03-2018 CVS42_RS08305 ae6b7e627552190534d05f7baf040ecd 342 SUPERFAMILY SSF46689 279 332 7.17E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS08305 ae6b7e627552190534d05f7baf040ecd 342 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 330 2.5E-162 T 29-03-2018 IPR014317 Transcription activator PspF CVS42_RS08305 ae6b7e627552190534d05f7baf040ecd 342 Pfam PF00158 Sigma-54 interaction domain 8 171 1.5E-60 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CVS42_RS17835 b2b1bb9608a422060f8306388aafbcd9 303 SMART SM00347 22 121 6.9E-15 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS17835 b2b1bb9608a422060f8306388aafbcd9 303 Pfam PF12802 MarR family 28 85 1.8E-10 T 29-03-2018 CVS42_RS17835 b2b1bb9608a422060f8306388aafbcd9 303 Gene3D G3DSA:3.40.630.30 141 283 1.2E-24 T 29-03-2018 CVS42_RS17835 b2b1bb9608a422060f8306388aafbcd9 303 Gene3D G3DSA:1.10.10.10 3 140 5.3E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS17835 b2b1bb9608a422060f8306388aafbcd9 303 SUPERFAMILY SSF46785 6 135 3.34E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS17835 b2b1bb9608a422060f8306388aafbcd9 303 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CVS42_RS17835 b2b1bb9608a422060f8306388aafbcd9 303 Pfam PF00583 Acetyltransferase (GNAT) family 193 279 2.3E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS17835 b2b1bb9608a422060f8306388aafbcd9 303 SUPERFAMILY SSF55729 144 302 5.32E-27 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS07550 5e41995f90ccfdb6e1e351304425478d 148 SUPERFAMILY SSF54631 1 135 3.82E-31 T 29-03-2018 CVS42_RS07550 5e41995f90ccfdb6e1e351304425478d 148 Gene3D G3DSA:3.10.580.10 1 66 2.7E-16 T 29-03-2018 CVS42_RS07550 5e41995f90ccfdb6e1e351304425478d 148 Gene3D G3DSA:3.10.580.10 67 146 3.6E-13 T 29-03-2018 CVS42_RS07550 5e41995f90ccfdb6e1e351304425478d 148 SMART SM00116 86 133 1.7E-7 T 29-03-2018 IPR000644 CBS domain CVS42_RS07550 5e41995f90ccfdb6e1e351304425478d 148 SMART SM00116 11 59 1.1E-8 T 29-03-2018 IPR000644 CBS domain CVS42_RS07550 5e41995f90ccfdb6e1e351304425478d 148 Pfam PF00571 CBS domain 5 56 8.9E-14 T 29-03-2018 IPR000644 CBS domain CVS42_RS07550 5e41995f90ccfdb6e1e351304425478d 148 Pfam PF00571 CBS domain 81 130 7.1E-11 T 29-03-2018 IPR000644 CBS domain CVS42_RS15555 c4cecd098ed586897c4402cec65b73eb 136 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 128 4.4E-13 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CVS42_RS15555 c4cecd098ed586897c4402cec65b73eb 136 SUPERFAMILY SSF54593 4 133 3.76E-23 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS15555 c4cecd098ed586897c4402cec65b73eb 136 Gene3D G3DSA:3.10.180.10 3 136 4.0E-21 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS09630 0a19500c514dcda5261ba9072480db3f 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 1.4E-32 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS09630 0a19500c514dcda5261ba9072480db3f 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CVS42_RS09630 0a19500c514dcda5261ba9072480db3f 98 SMART SM00411 3 92 5.7E-41 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS09630 0a19500c514dcda5261ba9072480db3f 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.708 T 29-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CVS42_RS09630 0a19500c514dcda5261ba9072480db3f 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 95 6.6E-51 T 29-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CVS42_RS09630 0a19500c514dcda5261ba9072480db3f 98 SUPERFAMILY SSF47729 3 94 3.97E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CVS42_RS09630 0a19500c514dcda5261ba9072480db3f 98 Gene3D G3DSA:4.10.520.10 1 98 4.0E-33 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CVS42_RS09630 0a19500c514dcda5261ba9072480db3f 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.4E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS09630 0a19500c514dcda5261ba9072480db3f 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.4E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS09630 0a19500c514dcda5261ba9072480db3f 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.4E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS13440 d28edc8c2fa7e305e0cff51f7b024b4c 439 SUPERFAMILY SSF54631 202 337 5.78E-20 T 29-03-2018 CVS42_RS13440 d28edc8c2fa7e305e0cff51f7b024b4c 439 SMART SM01091 348 428 2.1E-30 T 29-03-2018 IPR005170 Transporter-associated domain CVS42_RS13440 d28edc8c2fa7e305e0cff51f7b024b4c 439 Gene3D G3DSA:3.20.20.70 126 357 9.6E-19 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS13440 d28edc8c2fa7e305e0cff51f7b024b4c 439 Pfam PF03471 Transporter associated domain 349 427 5.3E-23 T 29-03-2018 IPR005170 Transporter-associated domain CVS42_RS13440 d28edc8c2fa7e305e0cff51f7b024b4c 439 SUPERFAMILY SSF56176 346 433 1.28E-24 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CVS42_RS13440 d28edc8c2fa7e305e0cff51f7b024b4c 439 Gene3D G3DSA:3.30.465.10 358 439 3.9E-25 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CVS42_RS13440 d28edc8c2fa7e305e0cff51f7b024b4c 439 Pfam PF00571 CBS domain 287 334 1.6E-4 T 29-03-2018 IPR000644 CBS domain CVS42_RS13440 d28edc8c2fa7e305e0cff51f7b024b4c 439 Pfam PF01595 Domain of unknown function DUF21 9 199 1.1E-39 T 29-03-2018 IPR002550 Domain of unknown function DUF21 CVS42_RS07385 bf5e5aa775aee6262cade9c5bc8705e9 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS07385 bf5e5aa775aee6262cade9c5bc8705e9 256 SMART SM00382 31 229 8.7E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS07385 bf5e5aa775aee6262cade9c5bc8705e9 256 Gene3D G3DSA:3.40.50.300 4 255 2.1E-71 T 29-03-2018 CVS42_RS07385 bf5e5aa775aee6262cade9c5bc8705e9 256 Pfam PF00005 ABC transporter 22 181 9.3E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS07385 bf5e5aa775aee6262cade9c5bc8705e9 256 SUPERFAMILY SSF52540 7 251 3.01E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS07385 bf5e5aa775aee6262cade9c5bc8705e9 256 PIRSF PIRSF039085 3 256 3.0E-115 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CVS42_RS19085 ee33818c057a882dc424ceb2d1f72fb7 139 Gene3D G3DSA:2.30.30.220 9 106 2.6E-40 T 29-03-2018 IPR007481 Stringent starvation protein B CVS42_RS19085 ee33818c057a882dc424ceb2d1f72fb7 139 PIRSF PIRSF005276 2 139 9.1E-55 T 29-03-2018 IPR007481 Stringent starvation protein B CVS42_RS19085 ee33818c057a882dc424ceb2d1f72fb7 139 SUPERFAMILY SSF101738 3 112 1.57E-47 T 29-03-2018 IPR007481 Stringent starvation protein B CVS42_RS19085 ee33818c057a882dc424ceb2d1f72fb7 139 Pfam PF04386 Stringent starvation protein B 8 138 1.6E-35 T 29-03-2018 IPR007481 Stringent starvation protein B CVS42_RS08520 203f6d3267b50c426caf97ce365f2ede 583 Gene3D G3DSA:3.40.50.300 325 578 7.6E-69 T 29-03-2018 CVS42_RS08520 203f6d3267b50c426caf97ce365f2ede 583 Pfam PF00005 ABC transporter 353 502 4.5E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS08520 203f6d3267b50c426caf97ce365f2ede 583 Pfam PF00664 ABC transporter transmembrane region 21 294 1.2E-38 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CVS42_RS08520 203f6d3267b50c426caf97ce365f2ede 583 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS08520 203f6d3267b50c426caf97ce365f2ede 583 SUPERFAMILY SSF52540 330 572 3.2E-81 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS08520 203f6d3267b50c426caf97ce365f2ede 583 Gene3D G3DSA:1.20.1560.10 2 324 1.9E-63 T 29-03-2018 CVS42_RS08520 203f6d3267b50c426caf97ce365f2ede 583 SMART SM00382 362 554 3.2E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS08520 203f6d3267b50c426caf97ce365f2ede 583 SUPERFAMILY SSF90123 6 321 5.89E-70 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CVS42_RS04845 da2905e70e0ba9e3402cbf3cef0dfa2d 200 Gene3D G3DSA:1.10.150.240 35 82 4.0E-14 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CVS42_RS04845 da2905e70e0ba9e3402cbf3cef0dfa2d 200 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 128 192 2.4E-16 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS04845 da2905e70e0ba9e3402cbf3cef0dfa2d 200 SUPERFAMILY SSF56784 12 195 9.98E-53 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS04845 da2905e70e0ba9e3402cbf3cef0dfa2d 200 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 12 192 9.0E-51 T 29-03-2018 IPR010976 Beta-phosphoglucomutase hydrolase CVS42_RS04845 da2905e70e0ba9e3402cbf3cef0dfa2d 200 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 192 6.6E-34 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS04845 da2905e70e0ba9e3402cbf3cef0dfa2d 200 Gene3D G3DSA:3.40.50.1000 7 34 0.0042 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS04845 da2905e70e0ba9e3402cbf3cef0dfa2d 200 Gene3D G3DSA:3.40.50.1000 83 200 1.0E-26 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS10585 69a44d15208a2e5644a5e26f84253157 572 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 219 230 - T 29-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10585 69a44d15208a2e5644a5e26f84253157 572 SUPERFAMILY SSF143243 12 197 4.71E-43 T 29-03-2018 CVS42_RS10585 69a44d15208a2e5644a5e26f84253157 572 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 90 154 1.0E-25 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10585 69a44d15208a2e5644a5e26f84253157 572 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 299 464 6.4E-36 T 29-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10585 69a44d15208a2e5644a5e26f84253157 572 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 461 540 6.8E-13 T 29-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10585 69a44d15208a2e5644a5e26f84253157 572 Gene3D G3DSA:1.10.645.10 179 359 1.3E-43 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10585 69a44d15208a2e5644a5e26f84253157 572 Gene3D G3DSA:1.10.645.10 382 539 1.5E-34 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10585 69a44d15208a2e5644a5e26f84253157 572 SUPERFAMILY SSF56762 196 540 2.22E-107 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10585 69a44d15208a2e5644a5e26f84253157 572 Pfam PF00374 Nickel-dependent hydrogenase 221 289 1.2E-13 T 29-03-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CVS42_RS10585 69a44d15208a2e5644a5e26f84253157 572 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 39 155 1.0E-23 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS09555 d8cb5cf1576941b37778fd1ccf125d5a 82 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 71 2.8E-8 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CVS42_RS09555 d8cb5cf1576941b37778fd1ccf125d5a 82 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 32 40 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CVS42_RS09555 d8cb5cf1576941b37778fd1ccf125d5a 82 SUPERFAMILY SSF54292 3 79 6.16E-20 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CVS42_RS09555 d8cb5cf1576941b37778fd1ccf125d5a 82 Gene3D G3DSA:3.10.20.30 1 81 6.6E-16 T 29-03-2018 IPR012675 Beta-grasp domain CVS42_RS21255 3ffc100b812b716fe074efcf4ac6836f 548 Gene3D G3DSA:3.40.50.970 334 534 1.6E-45 T 29-03-2018 CVS42_RS21255 3ffc100b812b716fe074efcf4ac6836f 548 Gene3D G3DSA:3.40.50.1220 183 333 6.1E-49 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CVS42_RS21255 3ffc100b812b716fe074efcf4ac6836f 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 7.5E-211 T 29-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CVS42_RS21255 3ffc100b812b716fe074efcf4ac6836f 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 7.5E-48 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CVS42_RS21255 3ffc100b812b716fe074efcf4ac6836f 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CVS42_RS21255 3ffc100b812b716fe074efcf4ac6836f 548 SUPERFAMILY SSF52518 356 546 1.41E-62 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS21255 3ffc100b812b716fe074efcf4ac6836f 548 Gene3D G3DSA:3.40.50.970 1 182 3.4E-64 T 29-03-2018 CVS42_RS21255 3ffc100b812b716fe074efcf4ac6836f 548 SUPERFAMILY SSF52518 1 175 1.79E-62 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS21255 3ffc100b812b716fe074efcf4ac6836f 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 168 9.1E-57 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CVS42_RS21255 3ffc100b812b716fe074efcf4ac6836f 548 SUPERFAMILY SSF52467 182 341 3.76E-55 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CVS42_RS21255 3ffc100b812b716fe074efcf4ac6836f 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 319 2.8E-43 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CVS42_RS07750 ce302b0995f0ffe39ecd1e15e5669018 731 Gene3D G3DSA:1.20.120.330 257 324 2.0E-4 T 29-03-2018 CVS42_RS07750 ce302b0995f0ffe39ecd1e15e5669018 731 Gene3D G3DSA:3.10.350.10 76 141 1.9E-6 T 29-03-2018 CVS42_RS07750 ce302b0995f0ffe39ecd1e15e5669018 731 Gene3D G3DSA:1.25.40.10 540 731 2.7E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS07750 ce302b0995f0ffe39ecd1e15e5669018 731 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 87 160 2.0E-24 T 29-03-2018 IPR020012 Motility protein FimV, N-terminal CVS42_RS07750 ce302b0995f0ffe39ecd1e15e5669018 731 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 687 730 8.6E-18 T 29-03-2018 IPR020011 Motility protein FimV, C-terminal CVS42_RS15435 240fe2d6c4e1cf1c80fca8845842a679 332 PRINTS PR01021 OMPA domain signature 213 235 4.7E-20 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS15435 240fe2d6c4e1cf1c80fca8845842a679 332 PRINTS PR01021 OMPA domain signature 260 276 4.7E-20 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS15435 240fe2d6c4e1cf1c80fca8845842a679 332 PRINTS PR01021 OMPA domain signature 245 260 4.7E-20 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS15435 240fe2d6c4e1cf1c80fca8845842a679 332 Gene3D G3DSA:2.40.160.20 9 196 1.6E-30 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS15435 240fe2d6c4e1cf1c80fca8845842a679 332 Gene3D G3DSA:3.30.1330.60 197 332 1.8E-33 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS15435 240fe2d6c4e1cf1c80fca8845842a679 332 Pfam PF00691 OmpA family 212 305 4.5E-18 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS15435 240fe2d6c4e1cf1c80fca8845842a679 332 SUPERFAMILY SSF103088 202 324 2.75E-30 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS15435 240fe2d6c4e1cf1c80fca8845842a679 332 ProSitePatterns PS01068 OmpA-like domain. 247 291 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CVS42_RS15435 240fe2d6c4e1cf1c80fca8845842a679 332 SUPERFAMILY SSF56925 22 162 6.54E-24 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS15435 240fe2d6c4e1cf1c80fca8845842a679 332 Pfam PF01389 OmpA-like transmembrane domain 23 181 1.0E-46 T 29-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 CVS42_RS20870 02e4ebddef60746cbc7b1a624968fbfe 251 Pfam PF13525 Outer membrane lipoprotein 29 235 2.1E-74 T 29-03-2018 CVS42_RS20870 02e4ebddef60746cbc7b1a624968fbfe 251 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 7 247 5.2E-86 T 29-03-2018 IPR017689 Outer membrane protein assembly factor BamD CVS42_RS20870 02e4ebddef60746cbc7b1a624968fbfe 251 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 243 38.092 T 29-03-2018 IPR017689 Outer membrane protein assembly factor BamD CVS42_RS20870 02e4ebddef60746cbc7b1a624968fbfe 251 Gene3D G3DSA:1.25.20.10 31 248 8.4E-15 T 29-03-2018 CVS42_RS20870 02e4ebddef60746cbc7b1a624968fbfe 251 SUPERFAMILY SSF48452 30 105 3.35E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS17485 26f311c75f02da3c3812bba407368860 98 SUPERFAMILY SSF46689 6 98 2.72E-25 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS17485 26f311c75f02da3c3812bba407368860 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 28.99 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CVS42_RS17485 26f311c75f02da3c3812bba407368860 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-12 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS17485 26f311c75f02da3c3812bba407368860 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-12 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS17485 26f311c75f02da3c3812bba407368860 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 8.3E-24 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CVS42_RS17485 26f311c75f02da3c3812bba407368860 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 8.3E-24 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CVS42_RS17485 26f311c75f02da3c3812bba407368860 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 8.3E-24 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CVS42_RS17485 26f311c75f02da3c3812bba407368860 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 8.3E-24 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CVS42_RS17485 26f311c75f02da3c3812bba407368860 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.4E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS17485 26f311c75f02da3c3812bba407368860 98 Gene3D G3DSA:1.10.10.60 1 98 6.7E-23 T 29-03-2018 CVS42_RS17485 26f311c75f02da3c3812bba407368860 98 PIRSF PIRSF002097 1 98 3.6E-42 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CVS42_RS06845 514da5c2cd0b5435488a01b42711573a 320 Pfam PF07885 Ion channel 230 319 4.8E-12 T 29-03-2018 IPR013099 Potassium channel domain CVS42_RS06845 514da5c2cd0b5435488a01b42711573a 320 SUPERFAMILY SSF141571 49 136 5.49E-14 T 29-03-2018 CVS42_RS06845 514da5c2cd0b5435488a01b42711573a 320 Pfam PF00805 Pentapeptide repeats (8 copies) 97 123 0.01 T 29-03-2018 IPR001646 Pentapeptide repeat CVS42_RS06845 514da5c2cd0b5435488a01b42711573a 320 SUPERFAMILY SSF81324 221 319 8.24E-15 T 29-03-2018 CVS42_RS06845 514da5c2cd0b5435488a01b42711573a 320 Gene3D G3DSA:1.10.287.70 216 320 4.0E-14 T 29-03-2018 CVS42_RS06845 514da5c2cd0b5435488a01b42711573a 320 Gene3D G3DSA:2.160.20.80 18 215 5.7E-15 T 29-03-2018 CVS42_RS05265 4a5f7d1e095fdcb2eb3addee084980b9 457 Gene3D G3DSA:1.10.3210.10 1 232 2.4E-27 T 29-03-2018 CVS42_RS05265 4a5f7d1e095fdcb2eb3addee084980b9 457 Gene3D G3DSA:1.10.3210.10 260 451 8.5E-45 T 29-03-2018 CVS42_RS05265 4a5f7d1e095fdcb2eb3addee084980b9 457 SUPERFAMILY SSF109604 121 227 1.31E-12 T 29-03-2018 CVS42_RS05265 4a5f7d1e095fdcb2eb3addee084980b9 457 SUPERFAMILY SSF109604 14 84 1.31E-12 T 29-03-2018 CVS42_RS05265 4a5f7d1e095fdcb2eb3addee084980b9 457 SUPERFAMILY SSF109604 270 437 6.04E-35 T 29-03-2018 CVS42_RS05265 4a5f7d1e095fdcb2eb3addee084980b9 457 SMART SM00471 275 410 6.2E-10 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS05265 4a5f7d1e095fdcb2eb3addee084980b9 457 Pfam PF13487 HD domain 131 184 1.1E-10 T 29-03-2018 CVS42_RS05265 4a5f7d1e095fdcb2eb3addee084980b9 457 Pfam PF13487 HD domain 330 392 7.2E-19 T 29-03-2018 CVS42_RS16960 6c3f932f475a29b2f6b07d6e5637a8b2 605 Gene3D G3DSA:3.40.190.10 172 324 1.3E-22 T 29-03-2018 CVS42_RS16960 6c3f932f475a29b2f6b07d6e5637a8b2 605 Gene3D G3DSA:3.90.76.10 83 171 2.6E-20 T 29-03-2018 CVS42_RS16960 6c3f932f475a29b2f6b07d6e5637a8b2 605 Gene3D G3DSA:3.10.105.10 325 531 4.2E-39 T 29-03-2018 CVS42_RS16960 6c3f932f475a29b2f6b07d6e5637a8b2 605 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 476 4.0E-63 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CVS42_RS16960 6c3f932f475a29b2f6b07d6e5637a8b2 605 SUPERFAMILY SSF53850 47 559 8.01E-99 T 29-03-2018 CVS42_RS16960 6c3f932f475a29b2f6b07d6e5637a8b2 605 PIRSF PIRSF002741 13 559 1.4E-81 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CVS42_RS21245 f1776eeb3fc7628ff8fa49d0e073a943 314 Gene3D G3DSA:3.20.10.10 148 308 9.2E-51 T 29-03-2018 CVS42_RS21245 f1776eeb3fc7628ff8fa49d0e073a943 314 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 15 312 4.0E-136 T 29-03-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 CVS42_RS21245 f1776eeb3fc7628ff8fa49d0e073a943 314 SUPERFAMILY SSF56752 12 313 3.79E-103 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CVS42_RS21245 f1776eeb3fc7628ff8fa49d0e073a943 314 ProSitePatterns PS00770 Aminotransferases class-IV signature. 199 228 - T 29-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 CVS42_RS21245 f1776eeb3fc7628ff8fa49d0e073a943 314 Gene3D G3DSA:3.30.470.10 5 147 1.8E-40 T 29-03-2018 CVS42_RS21245 f1776eeb3fc7628ff8fa49d0e073a943 314 Pfam PF01063 Amino-transferase class IV 41 273 5.5E-51 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CVS42_RS21850 6f76e56a15dd1b8a056cca31949f791a 257 Pfam PF00005 ABC transporter 24 183 4.8E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS21850 6f76e56a15dd1b8a056cca31949f791a 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 235 255 2.5E-11 T 29-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CVS42_RS21850 6f76e56a15dd1b8a056cca31949f791a 257 Gene3D G3DSA:3.40.50.300 1 256 1.9E-57 T 29-03-2018 CVS42_RS21850 6f76e56a15dd1b8a056cca31949f791a 257 SUPERFAMILY SSF52540 7 255 2.45E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS21850 6f76e56a15dd1b8a056cca31949f791a 257 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS21850 6f76e56a15dd1b8a056cca31949f791a 257 SMART SM00382 32 233 9.1E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS19980 9353e0cabbd040245fd5cfc9530fdabb 295 Pfam PF01430 Hsp33 protein 6 275 1.0E-83 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CVS42_RS19980 9353e0cabbd040245fd5cfc9530fdabb 295 SUPERFAMILY SSF118352 227 284 3.14E-18 T 29-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CVS42_RS19980 9353e0cabbd040245fd5cfc9530fdabb 295 SUPERFAMILY SSF64397 6 234 7.32E-74 T 29-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CVS42_RS19980 9353e0cabbd040245fd5cfc9530fdabb 295 Gene3D G3DSA:3.90.1280.10 228 283 2.1E-20 T 29-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CVS42_RS19980 9353e0cabbd040245fd5cfc9530fdabb 295 Hamap MF_00117 33 kDa chaperonin [hslO]. 5 286 31.717 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CVS42_RS19980 9353e0cabbd040245fd5cfc9530fdabb 295 Gene3D G3DSA:1.10.287.480 183 227 1.6E-19 T 29-03-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain CVS42_RS19980 9353e0cabbd040245fd5cfc9530fdabb 295 PIRSF PIRSF005261 1 286 1.5E-69 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CVS42_RS19980 9353e0cabbd040245fd5cfc9530fdabb 295 Gene3D G3DSA:3.55.30.10 1 177 6.2E-60 T 29-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CVS42_RS12175 8308a1f7439e51a5f7978aa4411fcef8 638 Gene3D G3DSA:3.20.20.450 367 627 1.3E-75 T 29-03-2018 IPR001633 EAL domain CVS42_RS12175 8308a1f7439e51a5f7978aa4411fcef8 638 SMART SM00267 188 359 5.2E-34 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS12175 8308a1f7439e51a5f7978aa4411fcef8 638 Pfam PF00563 EAL domain 382 612 5.8E-64 T 29-03-2018 IPR001633 EAL domain CVS42_RS12175 8308a1f7439e51a5f7978aa4411fcef8 638 SUPERFAMILY SSF55073 204 361 1.02E-30 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS12175 8308a1f7439e51a5f7978aa4411fcef8 638 SUPERFAMILY SSF141868 378 626 2.88E-72 T 29-03-2018 IPR001633 EAL domain CVS42_RS12175 8308a1f7439e51a5f7978aa4411fcef8 638 SMART SM00052 369 617 8.8E-83 T 29-03-2018 IPR001633 EAL domain CVS42_RS12175 8308a1f7439e51a5f7978aa4411fcef8 638 Gene3D G3DSA:3.30.70.270 193 366 1.0E-37 T 29-03-2018 CVS42_RS12175 8308a1f7439e51a5f7978aa4411fcef8 638 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 198 358 1.9E-25 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS12175 8308a1f7439e51a5f7978aa4411fcef8 638 Pfam PF00990 Diguanylate cyclase, GGDEF domain 200 354 8.7E-26 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS16335 1a3eadcbc560d258f74b86b22dc75326 419 SUPERFAMILY SSF51905 384 414 5.61E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS16335 1a3eadcbc560d258f74b86b22dc75326 419 SUPERFAMILY SSF51905 3 304 5.61E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS16335 1a3eadcbc560d258f74b86b22dc75326 419 Gene3D G3DSA:3.50.50.60 1 45 0.0036 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS16335 1a3eadcbc560d258f74b86b22dc75326 419 Pfam PF01593 Flavin containing amine oxidoreductase 12 302 2.4E-15 T 29-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CVS42_RS16335 1a3eadcbc560d258f74b86b22dc75326 419 Gene3D G3DSA:3.90.660.20 46 331 1.2E-30 T 29-03-2018 CVS42_RS17965 11d404b87f3c32fccd023d7c6c1c65da 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.2E-32 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS17965 11d404b87f3c32fccd023d7c6c1c65da 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.1E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS17965 11d404b87f3c32fccd023d7c6c1c65da 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.1E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS17965 11d404b87f3c32fccd023d7c6c1c65da 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.1E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS17965 11d404b87f3c32fccd023d7c6c1c65da 90 Gene3D G3DSA:4.10.520.10 1 90 2.1E-33 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CVS42_RS17965 11d404b87f3c32fccd023d7c6c1c65da 90 SUPERFAMILY SSF47729 1 90 2.65E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CVS42_RS17965 11d404b87f3c32fccd023d7c6c1c65da 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CVS42_RS17965 11d404b87f3c32fccd023d7c6c1c65da 90 SMART SM00411 1 90 5.3E-42 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS11795 52451218627fbfa33f8fec59fdb14fab 228 SUPERFAMILY SSF53474 37 225 1.72E-18 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS11795 52451218627fbfa33f8fec59fdb14fab 228 Pfam PF06057 Bacterial virulence protein (VirJ) 44 225 5.3E-56 T 29-03-2018 IPR010333 Bacterial virulence CVS42_RS11795 52451218627fbfa33f8fec59fdb14fab 228 Gene3D G3DSA:3.40.50.1820 20 227 6.7E-18 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS05920 a6ffb04d4aad1a5c3282ed09d694d641 112 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 25 112 5.0E-27 T 29-03-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 CVS42_RS05920 a6ffb04d4aad1a5c3282ed09d694d641 112 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 74 112 8.0E-20 T 29-03-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 CVS42_RS08620 e850a28d2dc6f2c3edf603bbaf2ab35a 290 Pfam PF02629 CoA binding domain 6 99 2.5E-31 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CVS42_RS08620 e850a28d2dc6f2c3edf603bbaf2ab35a 290 Gene3D G3DSA:3.40.50.720 1 119 2.1E-45 T 29-03-2018 CVS42_RS08620 e850a28d2dc6f2c3edf603bbaf2ab35a 290 SUPERFAMILY SSF52210 123 286 3.53E-58 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CVS42_RS08620 e850a28d2dc6f2c3edf603bbaf2ab35a 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.7E-40 T 29-03-2018 CVS42_RS08620 e850a28d2dc6f2c3edf603bbaf2ab35a 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.7E-40 T 29-03-2018 CVS42_RS08620 e850a28d2dc6f2c3edf603bbaf2ab35a 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.7E-40 T 29-03-2018 CVS42_RS08620 e850a28d2dc6f2c3edf603bbaf2ab35a 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.7E-40 T 29-03-2018 CVS42_RS08620 e850a28d2dc6f2c3edf603bbaf2ab35a 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.437 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CVS42_RS08620 e850a28d2dc6f2c3edf603bbaf2ab35a 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 29-03-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CVS42_RS08620 e850a28d2dc6f2c3edf603bbaf2ab35a 290 SUPERFAMILY SSF51735 1 122 2.73E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS08620 e850a28d2dc6f2c3edf603bbaf2ab35a 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 4.1E-146 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CVS42_RS08620 e850a28d2dc6f2c3edf603bbaf2ab35a 290 Gene3D G3DSA:3.40.50.261 120 289 5.7E-57 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CVS42_RS08620 e850a28d2dc6f2c3edf603bbaf2ab35a 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 29-03-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CVS42_RS08620 e850a28d2dc6f2c3edf603bbaf2ab35a 290 Pfam PF00549 CoA-ligase 151 270 1.0E-21 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CVS42_RS08620 e850a28d2dc6f2c3edf603bbaf2ab35a 290 SMART SM00881 4 100 2.2E-36 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CVS42_RS08620 e850a28d2dc6f2c3edf603bbaf2ab35a 290 PIRSF PIRSF001553 1 289 3.8E-136 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CVS42_RS03935 772a06ce531b059d4315095e82b4b914 212 SMART SM00100 2 124 1.6E-24 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CVS42_RS03935 772a06ce531b059d4315095e82b4b914 212 Pfam PF00027 Cyclic nucleotide-binding domain 23 111 3.3E-22 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CVS42_RS03935 772a06ce531b059d4315095e82b4b914 212 ProSitePatterns PS00042 Crp-type HTH domain signature. 170 193 - T 29-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CVS42_RS03935 772a06ce531b059d4315095e82b4b914 212 Gene3D G3DSA:2.60.120.10 5 146 1.1E-32 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS03935 772a06ce531b059d4315095e82b4b914 212 SUPERFAMILY SSF51206 8 139 7.2E-33 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CVS42_RS03935 772a06ce531b059d4315095e82b4b914 212 SMART SM00419 162 210 7.1E-16 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CVS42_RS03935 772a06ce531b059d4315095e82b4b914 212 SUPERFAMILY SSF46785 141 209 1.69E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS03935 772a06ce531b059d4315095e82b4b914 212 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 29-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site CVS42_RS03935 772a06ce531b059d4315095e82b4b914 212 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 168 184 1.7E-10 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CVS42_RS03935 772a06ce531b059d4315095e82b4b914 212 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 184 199 1.7E-10 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CVS42_RS03935 772a06ce531b059d4315095e82b4b914 212 Gene3D G3DSA:1.10.10.10 147 212 1.2E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS03935 772a06ce531b059d4315095e82b4b914 212 Pfam PF00325 Bacterial regulatory proteins, crp family 168 199 5.4E-15 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CVS42_RS03935 772a06ce531b059d4315095e82b4b914 212 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 91 - T 29-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site CVS42_RS06675 c987c0622e3a15c87d5f91880ab4e33e 241 Pfam PF01575 MaoC like domain 97 207 7.4E-23 T 29-03-2018 IPR002539 MaoC-like domain CVS42_RS06675 c987c0622e3a15c87d5f91880ab4e33e 241 SUPERFAMILY SSF54637 99 240 7.02E-31 T 29-03-2018 IPR029069 HotDog domain CVS42_RS06675 c987c0622e3a15c87d5f91880ab4e33e 241 Gene3D G3DSA:3.10.129.10 87 241 1.6E-28 T 29-03-2018 CVS42_RS00960 addfb6b92d7b9423e3163e5e4772ee65 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CVS42_RS00960 addfb6b92d7b9423e3163e5e4772ee65 598 SUPERFAMILY SSF52016 418 596 1.57E-51 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CVS42_RS00960 addfb6b92d7b9423e3163e5e4772ee65 598 Pfam PF00920 Dehydratase family 66 594 5.0E-146 T 29-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CVS42_RS00960 addfb6b92d7b9423e3163e5e4772ee65 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 5 597 7.2E-260 T 29-03-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 CVS42_RS00960 addfb6b92d7b9423e3163e5e4772ee65 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CVS42_RS00960 addfb6b92d7b9423e3163e5e4772ee65 598 SUPERFAMILY SSF143975 2 417 1.44E-132 T 29-03-2018 CVS42_RS18190 c4e4fe73d07d456860282092ab8cf154 274 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 11 263 20.349 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CVS42_RS18190 c4e4fe73d07d456860282092ab8cf154 274 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 14 257 6.1E-84 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CVS42_RS18190 c4e4fe73d07d456860282092ab8cf154 274 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 9 264 3.3E-90 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CVS42_RS18190 c4e4fe73d07d456860282092ab8cf154 274 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 143 155 - T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CVS42_RS13885 c374bc3afdc4b479de82304a2db41e8d 224 SUPERFAMILY SSF47598 56 89 4.22E-13 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CVS42_RS13885 c374bc3afdc4b479de82304a2db41e8d 224 Pfam PF17206 SeqA protein N-terminal domain 56 89 7.4E-21 T 29-03-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal CVS42_RS13885 c374bc3afdc4b479de82304a2db41e8d 224 Pfam PF03925 SeqA protein C-terminal domain 116 222 1.9E-41 T 29-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 CVS42_RS13885 c374bc3afdc4b479de82304a2db41e8d 224 SUPERFAMILY SSF82808 112 224 4.18E-40 T 29-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 CVS42_RS13885 c374bc3afdc4b479de82304a2db41e8d 224 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 56 224 42.808 T 29-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 CVS42_RS13885 c374bc3afdc4b479de82304a2db41e8d 224 Gene3D G3DSA:1.20.1380.10 119 220 2.1E-38 T 29-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 CVS42_RS13885 c374bc3afdc4b479de82304a2db41e8d 224 PIRSF PIRSF019401 56 114 5.4E-17 T 29-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 CVS42_RS13885 c374bc3afdc4b479de82304a2db41e8d 224 PIRSF PIRSF019401 90 224 2.0E-37 T 29-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 CVS42_RS13885 c374bc3afdc4b479de82304a2db41e8d 224 Gene3D G3DSA:1.10.1220.10 56 92 5.1E-23 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CVS42_RS15390 17a85cb65973c971630b9b450d2a5fb8 796 Gene3D G3DSA:3.40.50.280 133 216 0.07 T 29-03-2018 CVS42_RS15390 17a85cb65973c971630b9b450d2a5fb8 796 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 23 641 50.215 T 29-03-2018 IPR022946 Uncharacterised protein family UPF0313 CVS42_RS15390 17a85cb65973c971630b9b450d2a5fb8 796 Pfam PF11842 Domain of unknown function (DUF3362) 589 725 1.7E-44 T 29-03-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal CVS42_RS15390 17a85cb65973c971630b9b450d2a5fb8 796 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 23 639 4.9E-265 T 29-03-2018 IPR022946 Uncharacterised protein family UPF0313 CVS42_RS15390 17a85cb65973c971630b9b450d2a5fb8 796 Pfam PF08497 Radical SAM N-terminal 23 374 6.0E-146 T 29-03-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal CVS42_RS15390 17a85cb65973c971630b9b450d2a5fb8 796 Pfam PF04055 Radical SAM superfamily 375 580 1.5E-21 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS15390 17a85cb65973c971630b9b450d2a5fb8 796 SMART SM00729 371 618 9.4E-7 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CVS42_RS15390 17a85cb65973c971630b9b450d2a5fb8 796 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 375 395 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CVS42_RS15390 17a85cb65973c971630b9b450d2a5fb8 796 SUPERFAMILY SSF102114 374 435 3.14E-12 T 29-03-2018 CVS42_RS15390 17a85cb65973c971630b9b450d2a5fb8 796 SUPERFAMILY SSF102114 465 658 3.14E-12 T 29-03-2018 CVS42_RS15390 17a85cb65973c971630b9b450d2a5fb8 796 Gene3D G3DSA:3.20.20.70 288 730 3.1E-32 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS16385 87ceaf0f01c859b7897e25d0b2d09a5f 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 58 180 1.0E-17 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS16385 87ceaf0f01c859b7897e25d0b2d09a5f 203 SUPERFAMILY SSF56784 2 191 1.0E-35 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS16385 87ceaf0f01c859b7897e25d0b2d09a5f 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 81 179 2.8E-10 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS16385 87ceaf0f01c859b7897e25d0b2d09a5f 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 5.4E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS16385 87ceaf0f01c859b7897e25d0b2d09a5f 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 94 107 5.4E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS16385 87ceaf0f01c859b7897e25d0b2d09a5f 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 141 5.4E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS16385 87ceaf0f01c859b7897e25d0b2d09a5f 203 Gene3D G3DSA:3.40.50.1000 1 193 2.6E-23 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS09105 6566e0f01c7a03a5c94407caee9063dc 292 PIRSF PIRSF012524 6 282 3.4E-76 T 29-03-2018 IPR014464 Conserved virulence factor B CVS42_RS09105 6566e0f01c7a03a5c94407caee9063dc 292 Gene3D G3DSA:2.40.50.140 64 212 2.5E-14 T 29-03-2018 CVS42_RS09105 6566e0f01c7a03a5c94407caee9063dc 292 Pfam PF13509 S1 domain 10 69 5.0E-21 T 29-03-2018 CVS42_RS09105 6566e0f01c7a03a5c94407caee9063dc 292 Gene3D G3DSA:2.40.50.140 11 59 0.021 T 29-03-2018 CVS42_RS09105 6566e0f01c7a03a5c94407caee9063dc 292 Gene3D G3DSA:1.10.10.10 221 280 4.0E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS19915 d0d2b5fb01170424e271acb2acf63e6a 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 29-03-2018 IPR019844 Cold-shock conserved site CVS42_RS19915 d0d2b5fb01170424e271acb2acf63e6a 70 PRINTS PR00050 Cold shock protein signature 28 37 7.2E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CVS42_RS19915 d0d2b5fb01170424e271acb2acf63e6a 70 PRINTS PR00050 Cold shock protein signature 43 61 7.2E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CVS42_RS19915 d0d2b5fb01170424e271acb2acf63e6a 70 PRINTS PR00050 Cold shock protein signature 7 22 7.2E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CVS42_RS19915 d0d2b5fb01170424e271acb2acf63e6a 70 Gene3D G3DSA:2.40.50.140 1 70 2.6E-28 T 29-03-2018 CVS42_RS19915 d0d2b5fb01170424e271acb2acf63e6a 70 PIRSF PIRSF002599 1 70 2.3E-25 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CVS42_RS19915 d0d2b5fb01170424e271acb2acf63e6a 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 5.1E-32 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CVS42_RS19915 d0d2b5fb01170424e271acb2acf63e6a 70 SUPERFAMILY SSF50249 3 68 1.7E-25 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS19915 d0d2b5fb01170424e271acb2acf63e6a 70 SMART SM00357 6 70 1.4E-29 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CVS42_RS10280 d0160815f949242520c368b5a17f6cf0 416 SUPERFAMILY SSF118215 16 397 2.62E-95 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS10280 d0160815f949242520c368b5a17f6cf0 416 Gene3D G3DSA:1.10.3860.10 5 406 7.5E-72 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS10280 d0160815f949242520c368b5a17f6cf0 416 Pfam PF00375 Sodium:dicarboxylate symporter family 16 395 1.2E-61 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS10280 d0160815f949242520c368b5a17f6cf0 416 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 8.1E-15 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS10280 d0160815f949242520c368b5a17f6cf0 416 PRINTS PR00173 Glutamate-aspartate symporter signature 186 205 8.1E-15 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS10280 d0160815f949242520c368b5a17f6cf0 416 PRINTS PR00173 Glutamate-aspartate symporter signature 288 314 8.1E-15 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS10280 d0160815f949242520c368b5a17f6cf0 416 PRINTS PR00173 Glutamate-aspartate symporter signature 323 342 8.1E-15 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS10280 d0160815f949242520c368b5a17f6cf0 416 PRINTS PR00173 Glutamate-aspartate symporter signature 42 67 8.1E-15 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS10280 d0160815f949242520c368b5a17f6cf0 416 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 4 405 36.683 T 29-03-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 CVS42_RS05175 3380d73e43312e20925d23d5d91d5516 330 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS05175 3380d73e43312e20925d23d5d91d5516 330 SMART SM00382 44 240 5.0E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS05175 3380d73e43312e20925d23d5d91d5516 330 SUPERFAMILY SSF52540 10 261 4.47E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS05175 3380d73e43312e20925d23d5d91d5516 330 Gene3D G3DSA:3.40.50.300 7 330 1.4E-68 T 29-03-2018 CVS42_RS05175 3380d73e43312e20925d23d5d91d5516 330 Pfam PF00005 ABC transporter 35 191 2.5E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS05175 3380d73e43312e20925d23d5d91d5516 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 328 1.8E-21 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CVS42_RS05175 3380d73e43312e20925d23d5d91d5516 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 308 7.4E-17 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CVS42_RS05070 cbae9e132b65e24d2bfee2dd32c32978 390 SUPERFAMILY SSF103473 13 388 2.09E-52 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS05070 cbae9e132b65e24d2bfee2dd32c32978 390 Gene3D G3DSA:1.20.1250.20 4 206 1.2E-18 T 29-03-2018 CVS42_RS05070 cbae9e132b65e24d2bfee2dd32c32978 390 Pfam PF07690 Major Facilitator Superfamily 19 343 8.8E-34 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS05070 cbae9e132b65e24d2bfee2dd32c32978 390 Gene3D G3DSA:1.20.1250.20 207 389 1.1E-27 T 29-03-2018 CVS42_RS21880 cec4e8fd9921521a92e975784126e200 337 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 101 175 6.6E-7 T 29-03-2018 IPR000014 PAS domain CVS42_RS21880 cec4e8fd9921521a92e975784126e200 337 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 176 332 9.2E-32 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS21880 cec4e8fd9921521a92e975784126e200 337 SUPERFAMILY SSF55785 85 169 7.5E-14 T 29-03-2018 IPR000014 PAS domain CVS42_RS21880 cec4e8fd9921521a92e975784126e200 337 Pfam PF08447 PAS fold 82 161 1.4E-15 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CVS42_RS21880 cec4e8fd9921521a92e975784126e200 337 SMART SM00267 168 335 3.7E-46 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS21880 cec4e8fd9921521a92e975784126e200 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 329 2.5E-34 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS21880 cec4e8fd9921521a92e975784126e200 337 SMART SM00086 125 168 1.1E-5 T 29-03-2018 IPR001610 PAC motif CVS42_RS21880 cec4e8fd9921521a92e975784126e200 337 SUPERFAMILY SSF55073 184 334 3.3E-37 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS21880 cec4e8fd9921521a92e975784126e200 337 Gene3D G3DSA:3.30.70.270 187 336 1.4E-44 T 29-03-2018 CVS42_RS21880 cec4e8fd9921521a92e975784126e200 337 Gene3D G3DSA:3.30.450.20 82 186 2.4E-19 T 29-03-2018 CVS42_RS06500 cd723c26047686283c2ff930b70e708d 186 Gene3D G3DSA:2.40.128.110 21 186 4.4E-51 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CVS42_RS06500 cd723c26047686283c2ff930b70e708d 186 Pfam PF04264 YceI-like domain 23 180 4.2E-42 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CVS42_RS06500 cd723c26047686283c2ff930b70e708d 186 SUPERFAMILY SSF101874 19 185 8.5E-56 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CVS42_RS06500 cd723c26047686283c2ff930b70e708d 186 SMART SM00867 22 184 5.7E-68 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 Gene3D G3DSA:1.20.120.160 1218 1326 8.7E-10 T 29-03-2018 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 Gene3D G3DSA:3.40.190.10 144 213 4.5E-5 T 29-03-2018 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 SUPERFAMILY SSF55785 640 770 3.49E-12 T 29-03-2018 IPR000014 PAS domain CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 SMART SM00062 281 498 2.7E-11 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 SMART SM00062 49 258 1.7E-4 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 SUPERFAMILY SSF47226 1204 1301 8.37E-10 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 282 494 1.9E-20 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 88 253 6.7E-9 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 Gene3D G3DSA:3.40.190.10 276 436 9.5E-20 T 29-03-2018 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 SUPERFAMILY SSF52172 1106 1225 1.12E-33 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 905 1014 5.1E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 SUPERFAMILY SSF53850 58 257 5.59E-17 T 29-03-2018 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 PRINTS PR00344 Bacterial sensor protein C-terminal signature 940 954 1.9E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 PRINTS PR00344 Bacterial sensor protein C-terminal signature 999 1012 1.9E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 PRINTS PR00344 Bacterial sensor protein C-terminal signature 975 993 1.9E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 Gene3D G3DSA:3.30.450.20 623 790 1.9E-20 T 29-03-2018 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 Gene3D G3DSA:3.30.450.20 530 615 9.3E-5 T 29-03-2018 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 Pfam PF00512 His Kinase A (phospho-acceptor) domain 792 856 1.8E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 Pfam PF08447 PAS fold 682 756 6.0E-8 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 Gene3D G3DSA:3.40.50.2300 1094 1217 2.2E-35 T 29-03-2018 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 Gene3D G3DSA:1.10.287.130 791 851 1.6E-17 T 29-03-2018 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 Pfam PF01627 Hpt domain 1244 1314 3.2E-7 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 Gene3D G3DSA:3.30.565.10 852 1015 1.5E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 SMART SM00448 1107 1220 2.9E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 SMART SM00388 792 857 3.9E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 SMART SM00387 904 1015 1.4E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 Gene3D G3DSA:3.40.190.10 36 143 0.32 T 29-03-2018 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 SUPERFAMILY SSF47384 777 858 3.14E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 Pfam PF00072 Response regulator receiver domain 1109 1220 2.0E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 SUPERFAMILY SSF55874 846 1016 2.1E-41 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS09635 596c3a6e9c166fc5641443450cc37ab3 1329 SUPERFAMILY SSF53850 279 497 4.56E-29 T 29-03-2018 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 Gene3D G3DSA:2.70.150.10 5 215 6.4E-23 T 29-03-2018 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 19 680 3.6E-284 T 29-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 Pfam PF00122 E1-E2 ATPase 114 291 1.2E-30 T 29-03-2018 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 SUPERFAMILY SSF56784 439 564 6.46E-37 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 SUPERFAMILY SSF56784 359 408 6.46E-37 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 SUPERFAMILY SSF56784 300 324 6.46E-37 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 Gene3D G3DSA:3.40.1110.10 323 446 4.0E-18 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 80 331 2.5E-29 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 377 608 4.1E-43 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 539 3.7E-22 T 29-03-2018 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 543 555 3.7E-22 T 29-03-2018 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 467 477 3.7E-22 T 29-03-2018 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 312 326 3.7E-22 T 29-03-2018 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 161 175 3.7E-22 T 29-03-2018 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 Gene3D G3DSA:3.40.50.1000 447 576 9.8E-33 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 ProSitePatterns PS01229 Hypothetical cof family signature 2. 520 542 - T 29-03-2018 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 17 683 38.11 T 29-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 314 320 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 SUPERFAMILY SSF81665 215 306 2.75E-9 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 SUPERFAMILY SSF81665 40 111 2.75E-9 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 SUPERFAMILY SSF81653 120 214 1.44E-20 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CVS42_RS00135 2bf2ecb9580371e19eee0b0a62f482ea 685 Pfam PF00702 haloacid dehalogenase-like hydrolase 308 534 2.4E-31 T 29-03-2018 CVS42_RS17765 bd3a0989cc62a0b3dbd1d4f43c9e0c83 428 Gene3D G3DSA:3.30.470.20 191 329 1.1E-58 T 29-03-2018 CVS42_RS17765 bd3a0989cc62a0b3dbd1d4f43c9e0c83 428 SMART SM01209 103 296 1.4E-139 T 29-03-2018 CVS42_RS17765 bd3a0989cc62a0b3dbd1d4f43c9e0c83 428 SUPERFAMILY SSF51246 329 424 9.42E-32 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CVS42_RS17765 bd3a0989cc62a0b3dbd1d4f43c9e0c83 428 Gene3D G3DSA:3.30.1490.20 135 189 3.4E-23 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CVS42_RS17765 bd3a0989cc62a0b3dbd1d4f43c9e0c83 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 42.986 T 29-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CVS42_RS17765 bd3a0989cc62a0b3dbd1d4f43c9e0c83 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 3.7E-35 T 29-03-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CVS42_RS17765 bd3a0989cc62a0b3dbd1d4f43c9e0c83 428 SMART SM01210 330 423 1.4E-51 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CVS42_RS17765 bd3a0989cc62a0b3dbd1d4f43c9e0c83 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 3.7E-181 T 29-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CVS42_RS17765 bd3a0989cc62a0b3dbd1d4f43c9e0c83 428 SUPERFAMILY SSF52440 1 103 1.08E-35 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CVS42_RS17765 bd3a0989cc62a0b3dbd1d4f43c9e0c83 428 SUPERFAMILY SSF56059 104 320 4.77E-67 T 29-03-2018 CVS42_RS17765 bd3a0989cc62a0b3dbd1d4f43c9e0c83 428 Gene3D G3DSA:3.40.50.20 2 95 7.9E-37 T 29-03-2018 CVS42_RS17765 bd3a0989cc62a0b3dbd1d4f43c9e0c83 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 9.8E-83 T 29-03-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CVS42_RS17765 bd3a0989cc62a0b3dbd1d4f43c9e0c83 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 421 1.6E-28 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CVS42_RS17765 bd3a0989cc62a0b3dbd1d4f43c9e0c83 428 Gene3D G3DSA:3.90.600.10 330 423 5.9E-33 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CVS42_RS17765 bd3a0989cc62a0b3dbd1d4f43c9e0c83 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 29-03-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CVS42_RS06720 8b63197d8fe89685885e20b36e4b51e5 1291 SMART SM00487 838 1022 8.9E-30 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS06720 8b63197d8fe89685885e20b36e4b51e5 1291 SMART SM00490 1154 1236 9.2E-20 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS06720 8b63197d8fe89685885e20b36e4b51e5 1291 SUPERFAMILY SSF52540 826 1047 6.41E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS06720 8b63197d8fe89685885e20b36e4b51e5 1291 Gene3D G3DSA:3.40.50.10810 814 1056 6.8E-51 T 29-03-2018 CVS42_RS06720 8b63197d8fe89685885e20b36e4b51e5 1291 Pfam PF00271 Helicase conserved C-terminal domain 1126 1236 5.0E-17 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS06720 8b63197d8fe89685885e20b36e4b51e5 1291 Pfam PF00176 SNF2 family N-terminal domain 850 1115 2.8E-52 T 29-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CVS42_RS06720 8b63197d8fe89685885e20b36e4b51e5 1291 SUPERFAMILY SSF52540 1049 1281 8.24E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS06720 8b63197d8fe89685885e20b36e4b51e5 1291 Gene3D G3DSA:3.40.50.300 1117 1273 1.4E-34 T 29-03-2018 CVS42_RS03790 d2cf7185f0111195612aa516e804d7b7 223 Pfam PF14622 Ribonuclease-III-like 19 141 6.2E-33 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CVS42_RS03790 d2cf7185f0111195612aa516e804d7b7 223 SUPERFAMILY SSF69065 3 158 1.92E-49 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CVS42_RS03790 d2cf7185f0111195612aa516e804d7b7 223 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CVS42_RS03790 d2cf7185f0111195612aa516e804d7b7 223 SMART SM00535 20 148 2.5E-55 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CVS42_RS03790 d2cf7185f0111195612aa516e804d7b7 223 SMART SM00358 155 223 1.1E-20 T 29-03-2018 IPR014720 Double-stranded RNA-binding domain CVS42_RS03790 d2cf7185f0111195612aa516e804d7b7 223 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 29.861 T 29-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CVS42_RS03790 d2cf7185f0111195612aa516e804d7b7 223 Pfam PF00035 Double-stranded RNA binding motif 155 222 1.6E-13 T 29-03-2018 IPR014720 Double-stranded RNA-binding domain CVS42_RS03790 d2cf7185f0111195612aa516e804d7b7 223 Gene3D G3DSA:3.30.160.20 151 223 1.1E-20 T 29-03-2018 CVS42_RS03790 d2cf7185f0111195612aa516e804d7b7 223 Gene3D G3DSA:1.10.1520.10 1 150 2.0E-42 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CVS42_RS03790 d2cf7185f0111195612aa516e804d7b7 223 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 6.4E-74 T 29-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CVS42_RS03790 d2cf7185f0111195612aa516e804d7b7 223 SUPERFAMILY SSF54768 108 222 2.15E-25 T 29-03-2018 CVS42_RS10620 ba5bee915d6c813624f6c4bef039a64f 800 Gene3D G3DSA:3.30.70.100 2 107 9.3E-22 T 29-03-2018 CVS42_RS10620 ba5bee915d6c813624f6c4bef039a64f 800 Gene3D G3DSA:3.90.870.10 205 413 9.3E-50 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CVS42_RS10620 ba5bee915d6c813624f6c4bef039a64f 800 SUPERFAMILY SSF55821 185 411 2.08E-44 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CVS42_RS10620 ba5bee915d6c813624f6c4bef039a64f 800 ProSitePatterns PS00150 Acylphosphatase signature 1. 12 22 - T 29-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CVS42_RS10620 ba5bee915d6c813624f6c4bef039a64f 800 SUPERFAMILY SSF54975 4 89 8.5E-22 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CVS42_RS10620 ba5bee915d6c813624f6c4bef039a64f 800 Pfam PF07503 HypF finger 168 200 1.2E-14 T 29-03-2018 IPR011125 Zinc finger, HypF-type GO:0008270 CVS42_RS10620 ba5bee915d6c813624f6c4bef039a64f 800 Pfam PF07503 HypF finger 118 151 1.4E-15 T 29-03-2018 IPR011125 Zinc finger, HypF-type GO:0008270 CVS42_RS10620 ba5bee915d6c813624f6c4bef039a64f 800 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 11 779 7.6E-219 T 29-03-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 CVS42_RS10620 ba5bee915d6c813624f6c4bef039a64f 800 PIRSF PIRSF006256 3 789 1.2E-266 T 29-03-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 CVS42_RS10620 ba5bee915d6c813624f6c4bef039a64f 800 Pfam PF00708 Acylphosphatase 9 89 9.2E-20 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CVS42_RS10620 ba5bee915d6c813624f6c4bef039a64f 800 Gene3D G3DSA:3.30.420.40 593 758 2.9E-23 T 29-03-2018 CVS42_RS10620 ba5bee915d6c813624f6c4bef039a64f 800 Pfam PF01300 Telomere recombination 221 405 6.7E-52 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 CVS42_RS04295 11f3fed30c68c4eac16cdb2339f318be 176 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 147 6.0E-41 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS04295 11f3fed30c68c4eac16cdb2339f318be 176 SUPERFAMILY SSF53218 4 171 7.07E-48 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS04295 11f3fed30c68c4eac16cdb2339f318be 176 Gene3D G3DSA:3.40.980.10 1 176 2.8E-44 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS04295 11f3fed30c68c4eac16cdb2339f318be 176 SMART SM00852 7 153 8.3E-30 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS04295 11f3fed30c68c4eac16cdb2339f318be 176 Pfam PF00994 Probable molybdopterin binding domain 7 151 1.3E-32 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS04295 11f3fed30c68c4eac16cdb2339f318be 176 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 29-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CVS42_RS07675 9523197a6d26246342f8a17f9ae86526 322 SUPERFAMILY SSF47413 18 58 2.67E-6 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS07675 9523197a6d26246342f8a17f9ae86526 322 SMART SM00530 21 82 0.0023 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS07675 9523197a6d26246342f8a17f9ae86526 322 Pfam PF13464 Domain of unknown function (DUF4115) 246 319 2.3E-22 T 29-03-2018 IPR025194 Domain of unknown function DUF4115 CVS42_RS07675 9523197a6d26246342f8a17f9ae86526 322 Gene3D G3DSA:1.10.260.40 15 89 2.0E-9 T 29-03-2018 CVS42_RS07675 9523197a6d26246342f8a17f9ae86526 322 Pfam PF13413 Helix-turn-helix domain 22 80 1.4E-19 T 29-03-2018 CVS42_RS21355 09dfcbbf4842e4b68e2090ffc9173623 375 SUPERFAMILY SSF50129 325 375 8.95E-13 T 29-03-2018 IPR011032 GroES-like CVS42_RS21355 09dfcbbf4842e4b68e2090ffc9173623 375 Gene3D G3DSA:3.90.180.10 1 193 9.3E-64 T 29-03-2018 CVS42_RS21355 09dfcbbf4842e4b68e2090ffc9173623 375 Pfam PF00107 Zinc-binding dehydrogenase 203 334 1.9E-25 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CVS42_RS21355 09dfcbbf4842e4b68e2090ffc9173623 375 Gene3D G3DSA:3.90.180.10 314 375 1.3E-4 T 29-03-2018 CVS42_RS21355 09dfcbbf4842e4b68e2090ffc9173623 375 SUPERFAMILY SSF51735 166 340 4.37E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS21355 09dfcbbf4842e4b68e2090ffc9173623 375 SMART SM00829 18 373 8.3E-4 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CVS42_RS21355 09dfcbbf4842e4b68e2090ffc9173623 375 SUPERFAMILY SSF50129 5 191 3.04E-77 T 29-03-2018 IPR011032 GroES-like CVS42_RS21355 09dfcbbf4842e4b68e2090ffc9173623 375 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 160 6.2E-26 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CVS42_RS21355 09dfcbbf4842e4b68e2090ffc9173623 375 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CVS42_RS21355 09dfcbbf4842e4b68e2090ffc9173623 375 Gene3D G3DSA:3.40.50.720 194 313 2.8E-25 T 29-03-2018 CVS42_RS21355 09dfcbbf4842e4b68e2090ffc9173623 375 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 8 375 5.4E-226 T 29-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 CVS42_RS02805 01c1504a237a74425b314b58f8955b4e 336 Gene3D G3DSA:3.40.50.300 21 184 1.2E-27 T 29-03-2018 CVS42_RS02805 01c1504a237a74425b314b58f8955b4e 336 SUPERFAMILY SSF52540 23 254 2.9E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS02805 01c1504a237a74425b314b58f8955b4e 336 Gene3D G3DSA:1.10.10.10 260 330 2.5E-33 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02805 01c1504a237a74425b314b58f8955b4e 336 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 336 185.838 T 29-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CVS42_RS02805 01c1504a237a74425b314b58f8955b4e 336 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 9.6E-33 T 29-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CVS42_RS02805 01c1504a237a74425b314b58f8955b4e 336 SUPERFAMILY SSF46785 260 333 6.8E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02805 01c1504a237a74425b314b58f8955b4e 336 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 5.6E-119 T 29-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CVS42_RS02805 01c1504a237a74425b314b58f8955b4e 336 SMART SM00382 54 181 1.0E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS02805 01c1504a237a74425b314b58f8955b4e 336 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 329 1.9E-147 T 29-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CVS42_RS02805 01c1504a237a74425b314b58f8955b4e 336 Gene3D G3DSA:1.10.8.60 187 257 1.9E-31 T 29-03-2018 CVS42_RS02805 01c1504a237a74425b314b58f8955b4e 336 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 330 1.0E-35 T 29-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CVS42_RS08405 243522e9aaaf0eceaa3258a0952562c7 212 Pfam PF13460 NAD(P)H-binding 7 200 9.6E-29 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS08405 243522e9aaaf0eceaa3258a0952562c7 212 SUPERFAMILY SSF51735 1 211 2.73E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS08405 243522e9aaaf0eceaa3258a0952562c7 212 Gene3D G3DSA:3.40.50.720 1 212 5.5E-26 T 29-03-2018 CVS42_RS18695 22d5082923806d868b4c2fe81c31a06b 254 Gene3D G3DSA:1.10.10.10 3 76 9.4E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18695 22d5082923806d868b4c2fe81c31a06b 254 Pfam PF07729 FCD domain 99 226 1.7E-20 T 29-03-2018 IPR011711 GntR, C-terminal CVS42_RS18695 22d5082923806d868b4c2fe81c31a06b 254 SMART SM00895 99 227 2.6E-18 T 29-03-2018 IPR011711 GntR, C-terminal CVS42_RS18695 22d5082923806d868b4c2fe81c31a06b 254 SMART SM00345 15 74 3.6E-28 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS18695 22d5082923806d868b4c2fe81c31a06b 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.3E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS18695 22d5082923806d868b4c2fe81c31a06b 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.3E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS18695 22d5082923806d868b4c2fe81c31a06b 254 SUPERFAMILY SSF46785 8 82 2.8E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18695 22d5082923806d868b4c2fe81c31a06b 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 7.9E-25 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS18695 22d5082923806d868b4c2fe81c31a06b 254 Gene3D G3DSA:1.20.120.530 79 245 6.0E-23 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CVS42_RS18695 22d5082923806d868b4c2fe81c31a06b 254 SUPERFAMILY SSF48008 97 235 1.57E-20 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CVS42_RS18215 7ecdd585780c5a373c9655e832c8b670 115 PIRSF PIRSF002191 1 115 6.1E-50 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS18215 7ecdd585780c5a373c9655e832c8b670 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 29-03-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS18215 7ecdd585780c5a373c9655e832c8b670 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.594 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS18215 7ecdd585780c5a373c9655e832c8b670 115 Pfam PF01245 Ribosomal protein L19 4 113 1.4E-50 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS18215 7ecdd585780c5a373c9655e832c8b670 115 SUPERFAMILY SSF50104 2 114 7.62E-47 T 29-03-2018 IPR008991 Translation protein SH3-like domain CVS42_RS18215 7ecdd585780c5a373c9655e832c8b670 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 2.7E-51 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS18215 7ecdd585780c5a373c9655e832c8b670 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 2.2E-42 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS18215 7ecdd585780c5a373c9655e832c8b670 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 2.2E-42 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS18215 7ecdd585780c5a373c9655e832c8b670 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 2.2E-42 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS03910 3efd6634f9268ace8e40304f446c1f64 247 Gene3D G3DSA:3.40.190.10 139 236 0.0045 T 29-03-2018 CVS42_RS03910 3efd6634f9268ace8e40304f446c1f64 247 SUPERFAMILY SSF53850 27 228 1.41E-18 T 29-03-2018 CVS42_RS03910 3efd6634f9268ace8e40304f446c1f64 247 Gene3D G3DSA:3.40.190.10 19 138 3.7E-5 T 29-03-2018 CVS42_RS10080 49f7ac0256a729b5a3ec921d9457363e 319 Gene3D G3DSA:3.30.160.60 287 318 8.1E-15 T 29-03-2018 CVS42_RS10080 49f7ac0256a729b5a3ec921d9457363e 319 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 1 318 32.052 T 29-03-2018 IPR003770 Endolytic murein transglycosylase CVS42_RS10080 49f7ac0256a729b5a3ec921d9457363e 319 Gene3D G3DSA:3.30.160.60 59 93 1.5E-7 T 29-03-2018 CVS42_RS10080 49f7ac0256a729b5a3ec921d9457363e 319 Pfam PF02618 YceG-like family 29 312 1.7E-82 T 29-03-2018 IPR003770 Endolytic murein transglycosylase CVS42_RS10080 49f7ac0256a729b5a3ec921d9457363e 319 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 5 316 2.3E-92 T 29-03-2018 IPR003770 Endolytic murein transglycosylase CVS42_RS08830 e6f66ad687680d95562d01533063e851 125 PIRSF PIRSF016789 2 122 1.4E-41 T 29-03-2018 IPR007401 Protein of unknown function DUF454 CVS42_RS08830 e6f66ad687680d95562d01533063e851 125 Pfam PF04304 Protein of unknown function (DUF454) 3 116 6.8E-39 T 29-03-2018 IPR007401 Protein of unknown function DUF454 CVS42_RS22120 ed393b4d12e27440252be7851a7d1b52 288 Gene3D G3DSA:3.40.1380.10 42 240 1.5E-78 T 29-03-2018 CVS42_RS22120 ed393b4d12e27440252be7851a7d1b52 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 29-03-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22120 ed393b4d12e27440252be7851a7d1b52 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 37.394 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22120 ed393b4d12e27440252be7851a7d1b52 288 SUPERFAMILY SSF52943 2 288 1.57E-99 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22120 ed393b4d12e27440252be7851a7d1b52 288 Pfam PF00231 ATP synthase 5 287 5.4E-100 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22120 ed393b4d12e27440252be7851a7d1b52 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 4.5E-39 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22120 ed393b4d12e27440252be7851a7d1b52 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 4.5E-39 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22120 ed393b4d12e27440252be7851a7d1b52 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 4.5E-39 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22120 ed393b4d12e27440252be7851a7d1b52 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 4.5E-39 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22120 ed393b4d12e27440252be7851a7d1b52 288 Gene3D G3DSA:1.10.287.80 2 41 1.0E-18 T 29-03-2018 CVS42_RS22120 ed393b4d12e27440252be7851a7d1b52 288 Gene3D G3DSA:1.10.287.80 241 283 5.4E-15 T 29-03-2018 CVS42_RS22120 ed393b4d12e27440252be7851a7d1b52 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 2.3E-114 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS14665 068a84886e7d10ba8a2af2e837fef6be 288 Pfam PF13622 Thioesterase-like superfamily 33 283 2.1E-56 T 29-03-2018 CVS42_RS14665 068a84886e7d10ba8a2af2e837fef6be 288 SUPERFAMILY SSF54637 116 285 3.57E-58 T 29-03-2018 IPR029069 HotDog domain CVS42_RS14665 068a84886e7d10ba8a2af2e837fef6be 288 Gene3D G3DSA:3.10.129.10 2 116 1.1E-42 T 29-03-2018 CVS42_RS14665 068a84886e7d10ba8a2af2e837fef6be 288 Gene3D G3DSA:3.10.129.10 132 287 1.2E-53 T 29-03-2018 CVS42_RS14665 068a84886e7d10ba8a2af2e837fef6be 288 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 284 1.0E-96 T 29-03-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247 CVS42_RS14665 068a84886e7d10ba8a2af2e837fef6be 288 SUPERFAMILY SSF54637 5 114 1.16E-39 T 29-03-2018 IPR029069 HotDog domain CVS42_RS19200 53089dff4dc7ac158148254bd68f5b2b 95 SUPERFAMILY SSF69754 1 95 1.31E-35 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CVS42_RS19200 53089dff4dc7ac158148254bd68f5b2b 95 Gene3D G3DSA:3.30.160.100 1 95 7.4E-34 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CVS42_RS19200 53089dff4dc7ac158148254bd68f5b2b 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 1.8E-28 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CVS42_RS19200 53089dff4dc7ac158148254bd68f5b2b 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 3.4E-34 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CVS42_RS08375 6b010d22f78cf74ca17792c210fcc638 371 PIRSF PIRSF016907 1 369 8.3E-127 T 29-03-2018 IPR011386 Putative ATP-NAD kinase CVS42_RS08375 6b010d22f78cf74ca17792c210fcc638 371 Gene3D G3DSA:3.40.50.1980 169 341 0.0028 T 29-03-2018 CVS42_RS08375 6b010d22f78cf74ca17792c210fcc638 371 SUPERFAMILY SSF111331 87 137 4.14E-5 T 29-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain CVS42_RS08375 6b010d22f78cf74ca17792c210fcc638 371 Pfam PF01513 ATP-NAD kinase 4 365 5.5E-39 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CVS42_RS08375 6b010d22f78cf74ca17792c210fcc638 371 Gene3D G3DSA:3.40.50.10330 1 168 2.0E-16 T 29-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 CVS42_RS05065 a4f04fc9cbee06b45ba708a3c3142199 381 Pfam PF00155 Aminotransferase class I and II 38 370 2.5E-27 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CVS42_RS05065 a4f04fc9cbee06b45ba708a3c3142199 381 Gene3D G3DSA:3.40.640.10 38 269 2.7E-35 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS05065 a4f04fc9cbee06b45ba708a3c3142199 381 SUPERFAMILY SSF53383 1 375 6.89E-86 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS05065 a4f04fc9cbee06b45ba708a3c3142199 381 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 375 1.4E-128 T 29-03-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 CVS42_RS05065 a4f04fc9cbee06b45ba708a3c3142199 381 Gene3D G3DSA:3.90.1150.10 270 379 3.1E-16 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS06660 931e0c630f89981ef79675ee205444ca 240 SUPERFAMILY SSF56214 105 208 6.7E-21 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CVS42_RS06660 931e0c630f89981ef79675ee205444ca 240 SUPERFAMILY SSF56214 19 97 8.89E-19 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CVS42_RS06660 931e0c630f89981ef79675ee205444ca 240 Gene3D G3DSA:3.90.470.20 117 213 6.0E-14 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CVS42_RS06660 931e0c630f89981ef79675ee205444ca 240 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 106 191 1.5E-13 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CVS42_RS06660 931e0c630f89981ef79675ee205444ca 240 Gene3D G3DSA:3.90.470.20 4 116 4.2E-23 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CVS42_RS03160 ed7b696dba044fb3fdcde13a5f62b5e4 488 Pfam PF12626 Polymerase A arginine-rich C-terminus 348 482 2.7E-40 T 29-03-2018 IPR025866 Polymerase A arginine-rich C-terminal domain CVS42_RS03160 ed7b696dba044fb3fdcde13a5f62b5e4 488 SUPERFAMILY SSF81891 202 435 6.93E-48 T 29-03-2018 CVS42_RS03160 ed7b696dba044fb3fdcde13a5f62b5e4 488 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 29 483 37.847 T 29-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CVS42_RS03160 ed7b696dba044fb3fdcde13a5f62b5e4 488 Pfam PF01743 Poly A polymerase head domain 72 202 5.4E-37 T 29-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CVS42_RS03160 ed7b696dba044fb3fdcde13a5f62b5e4 488 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 43 472 6.0E-159 T 29-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CVS42_RS03160 ed7b696dba044fb3fdcde13a5f62b5e4 488 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 230 291 2.6E-22 T 29-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CVS42_RS03160 ed7b696dba044fb3fdcde13a5f62b5e4 488 Gene3D G3DSA:1.10.3090.10 201 436 3.9E-40 T 29-03-2018 CVS42_RS03160 ed7b696dba044fb3fdcde13a5f62b5e4 488 Gene3D G3DSA:3.30.460.10 38 199 2.7E-50 T 29-03-2018 CVS42_RS03160 ed7b696dba044fb3fdcde13a5f62b5e4 488 SUPERFAMILY SSF81301 44 200 1.63E-39 T 29-03-2018 CVS42_RS03260 6ca0e51fc63ca8b62e0bf8eaedbbf69f 155 SUPERFAMILY SSF47240 2 154 4.78E-45 T 29-03-2018 IPR009078 Ferritin-like superfamily CVS42_RS03260 6ca0e51fc63ca8b62e0bf8eaedbbf69f 155 ProSitePatterns PS00819 Dps protein family signature 2. 63 77 - T 29-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CVS42_RS03260 6ca0e51fc63ca8b62e0bf8eaedbbf69f 155 Gene3D G3DSA:1.20.1260.10 6 155 1.5E-41 T 29-03-2018 IPR012347 Ferritin-related CVS42_RS03260 6ca0e51fc63ca8b62e0bf8eaedbbf69f 155 PIRSF PIRSF005900 1 155 4.3E-44 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CVS42_RS03260 6ca0e51fc63ca8b62e0bf8eaedbbf69f 155 ProSitePatterns PS00818 Dps protein family signature 1. 37 53 - T 29-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CVS42_RS03260 6ca0e51fc63ca8b62e0bf8eaedbbf69f 155 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 37 53 2.6E-12 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CVS42_RS03260 6ca0e51fc63ca8b62e0bf8eaedbbf69f 155 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 132 150 2.6E-12 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CVS42_RS03260 6ca0e51fc63ca8b62e0bf8eaedbbf69f 155 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 61 77 2.6E-12 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CVS42_RS03260 6ca0e51fc63ca8b62e0bf8eaedbbf69f 155 Pfam PF00210 Ferritin-like domain 17 154 5.7E-27 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CVS42_RS21295 abb3f2a26cb68a144fa21bb9237e9231 392 Gene3D G3DSA:3.20.140.10 1 392 4.2E-97 T 29-03-2018 CVS42_RS21295 abb3f2a26cb68a144fa21bb9237e9231 392 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 4 390 9.1E-148 T 29-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CVS42_RS21295 abb3f2a26cb68a144fa21bb9237e9231 392 SUPERFAMILY SSF51690 116 389 1.47E-85 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CVS42_RS21295 abb3f2a26cb68a144fa21bb9237e9231 392 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 165 391 3.5E-78 T 29-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CVS42_RS21295 abb3f2a26cb68a144fa21bb9237e9231 392 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 392 46.093 T 29-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CVS42_RS21295 abb3f2a26cb68a144fa21bb9237e9231 392 SUPERFAMILY SSF54675 1 134 4.91E-39 T 29-03-2018 CVS42_RS21295 abb3f2a26cb68a144fa21bb9237e9231 392 PIRSF PIRSF000484 1 389 8.3E-64 T 29-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CVS42_RS04640 2366c4baa7765bd273e8da026ed6b40c 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 51 1.7E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS04640 2366c4baa7765bd273e8da026ed6b40c 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 9.4E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS04640 2366c4baa7765bd273e8da026ed6b40c 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 9.4E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS04640 2366c4baa7765bd273e8da026ed6b40c 197 SUPERFAMILY SSF46689 4 71 2.1E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS04640 2366c4baa7765bd273e8da026ed6b40c 197 SUPERFAMILY SSF48498 80 187 1.31E-13 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CVS42_RS04640 2366c4baa7765bd273e8da026ed6b40c 197 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 80 182 1.5E-15 T 29-03-2018 CVS42_RS04640 2366c4baa7765bd273e8da026ed6b40c 197 Gene3D G3DSA:1.10.10.60 1 60 7.5E-16 T 29-03-2018 CVS42_RS04640 2366c4baa7765bd273e8da026ed6b40c 197 Gene3D G3DSA:1.10.357.10 61 193 5.4E-16 T 29-03-2018 CVS42_RS00615 6807a792df431b2ee1615663868804a9 270 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 21 249 6.9E-79 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CVS42_RS00615 6807a792df431b2ee1615663868804a9 270 Pfam PF01226 Formate/nitrite transporter 26 246 3.2E-60 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CVS42_RS00615 6807a792df431b2ee1615663868804a9 270 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 156 166 - T 29-03-2018 IPR024002 Formate/nitrite transporter, conserved site CVS42_RS00615 6807a792df431b2ee1615663868804a9 270 Gene3D G3DSA:1.20.1080.10 2 258 5.3E-64 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CVS42_RS03755 e0debd152813ea819ae927485d86e272 535 Gene3D G3DSA:3.50.50.60 2 256 9.2E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS03755 e0debd152813ea819ae927485d86e272 535 Gene3D G3DSA:3.50.50.60 339 409 1.5E-13 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS03755 e0debd152813ea819ae927485d86e272 535 Pfam PF00890 FAD binding domain 10 391 7.3E-106 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS03755 e0debd152813ea819ae927485d86e272 535 PIRSF PIRSF000171 335 534 7.4E-13 T 29-03-2018 CVS42_RS03755 e0debd152813ea819ae927485d86e272 535 PIRSF PIRSF000171 1 262 2.4E-26 T 29-03-2018 CVS42_RS03755 e0debd152813ea819ae927485d86e272 535 Pfam PF02910 Fumarate reductase flavoprotein C-term 440 520 1.2E-14 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS03755 e0debd152813ea819ae927485d86e272 535 SUPERFAMILY SSF51905 9 254 5.19E-72 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS03755 e0debd152813ea819ae927485d86e272 535 SUPERFAMILY SSF51905 355 446 5.19E-72 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS03755 e0debd152813ea819ae927485d86e272 535 Gene3D G3DSA:3.90.700.10 257 338 6.1E-35 T 29-03-2018 CVS42_RS03755 e0debd152813ea819ae927485d86e272 535 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 369 376 9.4E-6 T 29-03-2018 CVS42_RS03755 e0debd152813ea819ae927485d86e272 535 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 9.4E-6 T 29-03-2018 CVS42_RS03755 e0debd152813ea819ae927485d86e272 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 354 376 2.8E-11 T 29-03-2018 CVS42_RS03755 e0debd152813ea819ae927485d86e272 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 2.8E-11 T 29-03-2018 CVS42_RS03755 e0debd152813ea819ae927485d86e272 535 SUPERFAMILY SSF56425 237 352 9.12E-43 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS03755 e0debd152813ea819ae927485d86e272 535 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 9 519 1.3E-210 T 29-03-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 CVS42_RS03755 e0debd152813ea819ae927485d86e272 535 Gene3D G3DSA:1.20.58.100 422 521 7.1E-29 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS03755 e0debd152813ea819ae927485d86e272 535 SUPERFAMILY SSF46977 424 525 5.1E-31 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS01705 5d41da7b140c6a92fe8e4cf7cc53dcf4 313 SUPERFAMILY SSF53335 3 311 1.3E-76 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS01705 5d41da7b140c6a92fe8e4cf7cc53dcf4 313 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 5 172 5.3E-44 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CVS42_RS01705 5d41da7b140c6a92fe8e4cf7cc53dcf4 313 Gene3D G3DSA:3.40.50.150 3 233 1.7E-56 T 29-03-2018 CVS42_RS01705 5d41da7b140c6a92fe8e4cf7cc53dcf4 313 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 291 309 - T 29-03-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 CVS42_RS01705 5d41da7b140c6a92fe8e4cf7cc53dcf4 313 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 3 19 2.9E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CVS42_RS01705 5d41da7b140c6a92fe8e4cf7cc53dcf4 313 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 101 115 2.9E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CVS42_RS01705 5d41da7b140c6a92fe8e4cf7cc53dcf4 313 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 147 160 2.9E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CVS42_RS01705 5d41da7b140c6a92fe8e4cf7cc53dcf4 313 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 63 75 - T 29-03-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 CVS42_RS01705 5d41da7b140c6a92fe8e4cf7cc53dcf4 313 Pfam PF00145 C-5 cytosine-specific DNA methylase 4 309 4.6E-62 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS09590 6fe1a8dd3db8cb19243e69099ad7f106 351 SUPERFAMILY SSF102114 66 261 3.4E-10 T 29-03-2018 CVS42_RS09590 6fe1a8dd3db8cb19243e69099ad7f106 351 SMART SM00729 63 288 0.0078 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CVS42_RS09590 6fe1a8dd3db8cb19243e69099ad7f106 351 Gene3D G3DSA:3.20.20.70 32 293 9.1E-23 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS09590 6fe1a8dd3db8cb19243e69099ad7f106 351 Pfam PF04055 Radical SAM superfamily 67 245 9.8E-11 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS02630 8474ec072547b81fb80453d5018a457e 153 Gene3D G3DSA:3.40.1550.10 1 153 5.5E-31 T 29-03-2018 IPR028976 CheC-like domain CVS42_RS02630 8474ec072547b81fb80453d5018a457e 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 140 1.5E-22 T 29-03-2018 IPR028051 Chemotaxis phosphatase CheX-like domain CVS42_RS02630 8474ec072547b81fb80453d5018a457e 153 SUPERFAMILY SSF103039 1 153 2.35E-36 T 29-03-2018 IPR028976 CheC-like domain CVS42_RS17865 5d8fbc9c17b31c17ef44cd911e13f670 144 Pfam PF03603 DNA polymerase III psi subunit 6 137 1.1E-11 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS17865 5d8fbc9c17b31c17ef44cd911e13f670 144 SUPERFAMILY SSF102220 66 139 3.4E-6 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS17865 5d8fbc9c17b31c17ef44cd911e13f670 144 Gene3D G3DSA:3.40.50.10220 54 139 6.5E-6 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS06590 566ce8f1486ed1699921428ec01d3137 397 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 1.4E-112 T 29-03-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CVS42_RS06590 566ce8f1486ed1699921428ec01d3137 397 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 392 56.364 T 29-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CVS42_RS06590 566ce8f1486ed1699921428ec01d3137 397 Pfam PF07055 Enoyl reductase FAD binding domain 323 386 4.5E-31 T 29-03-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CVS42_RS06590 566ce8f1486ed1699921428ec01d3137 397 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.8E-38 T 29-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CVS42_RS06590 566ce8f1486ed1699921428ec01d3137 397 Gene3D G3DSA:3.40.50.720 27 199 3.6E-5 T 29-03-2018 CVS42_RS12755 3c4845766feade0f158b1ae36cdd5fc6 198 PIRSF PIRSF006806 5 194 2.3E-37 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CVS42_RS12755 3c4845766feade0f158b1ae36cdd5fc6 198 Gene3D G3DSA:3.40.50.10420 1 198 1.1E-59 T 29-03-2018 CVS42_RS12755 3c4845766feade0f158b1ae36cdd5fc6 198 SUPERFAMILY SSF100950 7 197 1.67E-58 T 29-03-2018 CVS42_RS12755 3c4845766feade0f158b1ae36cdd5fc6 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 8 191 5.4E-54 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CVS42_RS12755 3c4845766feade0f158b1ae36cdd5fc6 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 8 191 5.1E-46 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CVS42_RS06640 7056068ac99722e5fcfbfec7712d7227 278 SUPERFAMILY SSF53328 82 278 1.96E-57 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CVS42_RS06640 7056068ac99722e5fcfbfec7712d7227 278 Pfam PF01842 ACT domain 5 66 4.0E-8 T 29-03-2018 IPR002912 ACT domain CVS42_RS06640 7056068ac99722e5fcfbfec7712d7227 278 Gene3D G3DSA:3.40.50.170 82 278 5.7E-51 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CVS42_RS06640 7056068ac99722e5fcfbfec7712d7227 278 Pfam PF00551 Formyl transferase 82 259 1.1E-45 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CVS42_RS06640 7056068ac99722e5fcfbfec7712d7227 278 PIRSF PIRSF036480 1 278 5.8E-113 T 29-03-2018 CVS42_RS06640 7056068ac99722e5fcfbfec7712d7227 278 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 4 277 4.1E-123 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CVS42_RS06640 7056068ac99722e5fcfbfec7712d7227 278 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 45.769 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CVS42_RS06640 7056068ac99722e5fcfbfec7712d7227 278 SUPERFAMILY SSF55021 4 66 3.08E-8 T 29-03-2018 CVS42_RS06640 7056068ac99722e5fcfbfec7712d7227 278 Gene3D G3DSA:3.30.70.260 1 79 1.1E-11 T 29-03-2018 CVS42_RS06640 7056068ac99722e5fcfbfec7712d7227 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 1.9E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CVS42_RS06640 7056068ac99722e5fcfbfec7712d7227 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 1.9E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CVS42_RS06640 7056068ac99722e5fcfbfec7712d7227 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 1.9E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CVS42_RS06640 7056068ac99722e5fcfbfec7712d7227 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 1.9E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CVS42_RS06640 7056068ac99722e5fcfbfec7712d7227 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 1.9E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CVS42_RS06640 7056068ac99722e5fcfbfec7712d7227 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 1.9E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CVS42_RS14545 043f7d8b055936b870e998b105a4713c 295 Gene3D G3DSA:3.90.25.10 204 272 1.6E-21 T 29-03-2018 CVS42_RS14545 043f7d8b055936b870e998b105a4713c 295 Gene3D G3DSA:3.40.50.720 2 170 2.8E-16 T 29-03-2018 CVS42_RS14545 043f7d8b055936b870e998b105a4713c 295 SUPERFAMILY SSF51735 1 292 4.55E-98 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS14545 043f7d8b055936b870e998b105a4713c 295 Pfam PF04321 RmlD substrate binding domain 1 292 1.5E-101 T 29-03-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 CVS42_RS14545 043f7d8b055936b870e998b105a4713c 295 Gene3D G3DSA:3.90.25.10 171 203 1.4E-5 T 29-03-2018 CVS42_RS14545 043f7d8b055936b870e998b105a4713c 295 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 291 5.4E-93 T 29-03-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 CVS42_RS12910 07b1a11b226302688223c6587e3bb3c8 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 170 1.5E-17 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CVS42_RS12910 07b1a11b226302688223c6587e3bb3c8 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 507 7.8E-41 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS12910 07b1a11b226302688223c6587e3bb3c8 543 SMART SM00304 211 265 2.2E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS12910 07b1a11b226302688223c6587e3bb3c8 543 SUPERFAMILY SSF58104 233 542 5.75E-72 T 29-03-2018 CVS42_RS12910 07b1a11b226302688223c6587e3bb3c8 543 Gene3D G3DSA:1.20.120.30 25 178 1.2E-14 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CVS42_RS12910 07b1a11b226302688223c6587e3bb3c8 543 Pfam PF00672 HAMP domain 216 261 3.6E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS12910 07b1a11b226302688223c6587e3bb3c8 543 Gene3D G3DSA:1.10.287.950 322 543 1.0E-52 T 29-03-2018 CVS42_RS12910 07b1a11b226302688223c6587e3bb3c8 543 Gene3D G3DSA:1.10.287.1060 242 321 2.4E-4 T 29-03-2018 CVS42_RS12910 07b1a11b226302688223c6587e3bb3c8 543 SMART SM00283 280 541 3.6E-74 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS00370 26bd3527dd5181745222c09b1016c06e 300 Gene3D G3DSA:3.40.190.10 89 176 2.7E-6 T 29-03-2018 CVS42_RS00370 26bd3527dd5181745222c09b1016c06e 300 Gene3D G3DSA:1.10.10.10 1 88 2.1E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS00370 26bd3527dd5181745222c09b1016c06e 300 SUPERFAMILY SSF46785 3 88 9.67E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS00370 26bd3527dd5181745222c09b1016c06e 300 Gene3D G3DSA:3.40.190.10 177 263 6.6E-9 T 29-03-2018 CVS42_RS00370 26bd3527dd5181745222c09b1016c06e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS00370 26bd3527dd5181745222c09b1016c06e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS00370 26bd3527dd5181745222c09b1016c06e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS00370 26bd3527dd5181745222c09b1016c06e 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.4E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS00370 26bd3527dd5181745222c09b1016c06e 300 SUPERFAMILY SSF53850 85 290 3.26E-29 T 29-03-2018 CVS42_RS00370 26bd3527dd5181745222c09b1016c06e 300 Pfam PF03466 LysR substrate binding domain 91 293 2.4E-20 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS22000 e77158013e7366e5e613bf8823eb3023 421 SUPERFAMILY SSF51556 50 370 8.9E-108 T 29-03-2018 IPR032466 Metal-dependent hydrolase CVS42_RS22000 e77158013e7366e5e613bf8823eb3023 421 Gene3D G3DSA:3.20.20.140 63 358 5.6E-42 T 29-03-2018 CVS42_RS22000 e77158013e7366e5e613bf8823eb3023 421 SUPERFAMILY SSF51338 361 402 6.98E-6 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS22000 e77158013e7366e5e613bf8823eb3023 421 SUPERFAMILY SSF51338 10 50 6.98E-6 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS22000 e77158013e7366e5e613bf8823eb3023 421 Pfam PF07969 Amidohydrolase family 38 398 1.2E-54 T 29-03-2018 IPR013108 Amidohydrolase 3 CVS42_RS22000 e77158013e7366e5e613bf8823eb3023 421 Gene3D G3DSA:2.30.40.10 1 62 1.1E-6 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS11515 9d47cad5f2ac2f368d5b734e68d7d1de 487 Gene3D G3DSA:3.20.20.70 1 484 8.4E-119 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS11515 9d47cad5f2ac2f368d5b734e68d7d1de 487 Pfam PF00571 CBS domain 95 143 1.4E-8 T 29-03-2018 IPR000644 CBS domain CVS42_RS11515 9d47cad5f2ac2f368d5b734e68d7d1de 487 Pfam PF00571 CBS domain 149 202 1.5E-6 T 29-03-2018 IPR000644 CBS domain CVS42_RS11515 9d47cad5f2ac2f368d5b734e68d7d1de 487 SMART SM01240 7 473 0.0 T 29-03-2018 CVS42_RS11515 9d47cad5f2ac2f368d5b734e68d7d1de 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 29-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CVS42_RS11515 9d47cad5f2ac2f368d5b734e68d7d1de 487 PIRSF PIRSF000130 1 487 2.5E-200 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CVS42_RS11515 9d47cad5f2ac2f368d5b734e68d7d1de 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 1.9E-161 T 29-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CVS42_RS11515 9d47cad5f2ac2f368d5b734e68d7d1de 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.7E-196 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CVS42_RS11515 9d47cad5f2ac2f368d5b734e68d7d1de 487 SMART SM00116 158 206 2.4E-10 T 29-03-2018 IPR000644 CBS domain CVS42_RS11515 9d47cad5f2ac2f368d5b734e68d7d1de 487 SMART SM00116 96 144 1.8E-10 T 29-03-2018 IPR000644 CBS domain CVS42_RS11515 9d47cad5f2ac2f368d5b734e68d7d1de 487 SUPERFAMILY SSF51412 217 477 4.58E-127 T 29-03-2018 CVS42_RS11515 9d47cad5f2ac2f368d5b734e68d7d1de 487 SUPERFAMILY SSF51412 1 90 4.58E-127 T 29-03-2018 CVS42_RS11515 9d47cad5f2ac2f368d5b734e68d7d1de 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.222 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CVS42_RS11515 9d47cad5f2ac2f368d5b734e68d7d1de 487 SUPERFAMILY SSF54631 94 203 7.83E-28 T 29-03-2018 CVS42_RS06255 5cc7447a5331df683c6860a0012cdfa0 244 SMART SM00062 21 244 3.0E-4 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS06255 5cc7447a5331df683c6860a0012cdfa0 244 SUPERFAMILY SSF53850 18 240 2.04E-25 T 29-03-2018 CVS42_RS06255 5cc7447a5331df683c6860a0012cdfa0 244 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 22 241 9.7E-17 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS06255 5cc7447a5331df683c6860a0012cdfa0 244 Gene3D G3DSA:3.40.190.10 18 164 4.7E-9 T 29-03-2018 CVS42_RS06255 5cc7447a5331df683c6860a0012cdfa0 244 Gene3D G3DSA:3.40.190.10 165 244 2.0E-8 T 29-03-2018 CVS42_RS17175 a4f90f2660a4168345ed58a984655c30 432 Gene3D G3DSA:3.10.50.40 284 388 1.1E-31 T 29-03-2018 CVS42_RS17175 a4f90f2660a4168345ed58a984655c30 432 SUPERFAMILY SSF109998 29 205 3.53E-42 T 29-03-2018 IPR027304 Trigger factor/SurA domain CVS42_RS17175 a4f90f2660a4168345ed58a984655c30 432 SUPERFAMILY SSF54534 283 386 1.57E-32 T 29-03-2018 CVS42_RS17175 a4f90f2660a4168345ed58a984655c30 432 Hamap MF_01183 Chaperone SurA [surA]. 4 430 33.973 T 29-03-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 CVS42_RS17175 a4f90f2660a4168345ed58a984655c30 432 Pfam PF13616 PPIC-type PPIASE domain 282 385 3.8E-26 T 29-03-2018 CVS42_RS17175 a4f90f2660a4168345ed58a984655c30 432 Gene3D G3DSA:1.10.4030.10 25 151 4.7E-24 T 29-03-2018 CVS42_RS17175 a4f90f2660a4168345ed58a984655c30 432 Gene3D G3DSA:3.10.50.40 166 283 5.5E-25 T 29-03-2018 CVS42_RS17175 a4f90f2660a4168345ed58a984655c30 432 Pfam PF00639 PPIC-type PPIASE domain 181 273 3.3E-20 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CVS42_RS17175 a4f90f2660a4168345ed58a984655c30 432 Pfam PF09312 SurA N-terminal domain 28 145 3.2E-39 T 29-03-2018 IPR015391 SurA N-terminal CVS42_RS17175 a4f90f2660a4168345ed58a984655c30 432 SUPERFAMILY SSF54534 176 278 6.54E-27 T 29-03-2018 CVS42_RS19875 6f683720af1e8a2ce001a70f3971f2c7 211 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 203 211 - T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CVS42_RS19875 6f683720af1e8a2ce001a70f3971f2c7 211 SUPERFAMILY SSF56925 22 211 1.31E-31 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS19875 6f683720af1e8a2ce001a70f3971f2c7 211 Gene3D G3DSA:2.40.160.20 21 211 2.7E-37 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS19875 6f683720af1e8a2ce001a70f3971f2c7 211 Pfam PF03922 OmpW family 22 211 1.8E-60 T 29-03-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CVS42_RS00340 85e1c5cbdcb2f0b1869ccdd13d1b9350 247 SUPERFAMILY SSF52172 1 118 7.83E-27 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS00340 85e1c5cbdcb2f0b1869ccdd13d1b9350 247 Gene3D G3DSA:2.20.25.10 209 246 2.8E-14 T 29-03-2018 CVS42_RS00340 85e1c5cbdcb2f0b1869ccdd13d1b9350 247 Gene3D G3DSA:3.40.50.2300 1 132 1.9E-25 T 29-03-2018 CVS42_RS00340 85e1c5cbdcb2f0b1869ccdd13d1b9350 247 SMART SM00448 2 113 9.9E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS00340 85e1c5cbdcb2f0b1869ccdd13d1b9350 247 Pfam PF00072 Response regulator receiver domain 5 113 2.3E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS00340 85e1c5cbdcb2f0b1869ccdd13d1b9350 247 Pfam PF04397 LytTr DNA-binding domain 149 245 1.5E-30 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CVS42_RS00340 85e1c5cbdcb2f0b1869ccdd13d1b9350 247 SMART SM00850 148 246 7.7E-37 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CVS42_RS00340 85e1c5cbdcb2f0b1869ccdd13d1b9350 247 Gene3D G3DSA:2.40.50.40 138 208 1.3E-17 T 29-03-2018 CVS42_RS16185 efd5794ff5c78cdeea518b83e465719f 364 Pfam PF01728 FtsJ-like methyltransferase 185 256 1.1E-6 T 29-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CVS42_RS16185 efd5794ff5c78cdeea518b83e465719f 364 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 354 83.784 T 29-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 CVS42_RS16185 efd5794ff5c78cdeea518b83e465719f 364 PIRSF PIRSF028774 1 359 6.4E-169 T 29-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 CVS42_RS16185 efd5794ff5c78cdeea518b83e465719f 364 Gene3D G3DSA:3.40.50.150 175 356 1.2E-16 T 29-03-2018 CVS42_RS16185 efd5794ff5c78cdeea518b83e465719f 364 SUPERFAMILY SSF53335 183 312 1.59E-11 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS09145 818c5f707e66cadcb346e7752a921ddf 92 Pfam PF05166 YcgL domain 3 75 1.8E-29 T 29-03-2018 IPR027354 YcgL domain CVS42_RS09145 818c5f707e66cadcb346e7752a921ddf 92 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.23 T 29-03-2018 IPR027354 YcgL domain CVS42_RS09145 818c5f707e66cadcb346e7752a921ddf 92 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 82 1.0E-22 T 29-03-2018 IPR027354 YcgL domain CVS42_RS09145 818c5f707e66cadcb346e7752a921ddf 92 SUPERFAMILY SSF160191 1 89 1.44E-35 T 29-03-2018 CVS42_RS11840 ec8239e79e6a1432b14754f65a694d2c 134 SUPERFAMILY SSF81273 91 134 4.32E-10 T 29-03-2018 CVS42_RS11840 ec8239e79e6a1432b14754f65a694d2c 134 SUPERFAMILY SSF81273 2 58 3.92E-16 T 29-03-2018 CVS42_RS11840 ec8239e79e6a1432b14754f65a694d2c 134 Gene3D G3DSA:4.10.430.10 94 134 1.3E-18 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CVS42_RS11840 ec8239e79e6a1432b14754f65a694d2c 134 PIRSF PIRSF002096 1 134 2.1E-55 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CVS42_RS11840 ec8239e79e6a1432b14754f65a694d2c 134 SMART SM00528 88 134 2.9E-20 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CVS42_RS11840 ec8239e79e6a1432b14754f65a694d2c 134 Gene3D G3DSA:1.10.287.1050 1 57 1.3E-23 T 29-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 CVS42_RS11840 ec8239e79e6a1432b14754f65a694d2c 134 Pfam PF00816 H-NS histone family 33 128 7.5E-18 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CVS42_RS20595 81ba7e60d5ab6eaebe99bc07a6604b4d 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.5E-70 T 29-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CVS42_RS20595 81ba7e60d5ab6eaebe99bc07a6604b4d 156 PIRSF PIRSF002122 3 156 6.0E-62 T 29-03-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 CVS42_RS20595 81ba7e60d5ab6eaebe99bc07a6604b4d 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.4E-67 T 29-03-2018 IPR023798 Ribosomal protein S7 domain CVS42_RS20595 81ba7e60d5ab6eaebe99bc07a6604b4d 156 Gene3D G3DSA:1.10.455.10 6 156 5.9E-62 T 29-03-2018 IPR023798 Ribosomal protein S7 domain CVS42_RS20595 81ba7e60d5ab6eaebe99bc07a6604b4d 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 29-03-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS20595 81ba7e60d5ab6eaebe99bc07a6604b4d 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.149 T 29-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CVS42_RS20595 81ba7e60d5ab6eaebe99bc07a6604b4d 156 SUPERFAMILY SSF47973 6 149 4.19E-61 T 29-03-2018 IPR023798 Ribosomal protein S7 domain CVS42_RS00215 168f5ef5f44690f5624ffb04f1944cbe 802 SMART SM00304 350 402 8.0E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS00215 168f5ef5f44690f5624ffb04f1944cbe 802 Gene3D G3DSA:3.30.450.20 378 519 5.5E-10 T 29-03-2018 CVS42_RS00215 168f5ef5f44690f5624ffb04f1944cbe 802 SUPERFAMILY SSF55785 402 513 1.05E-5 T 29-03-2018 IPR000014 PAS domain CVS42_RS00215 168f5ef5f44690f5624ffb04f1944cbe 802 SMART SM00387 680 789 2.6E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00215 168f5ef5f44690f5624ffb04f1944cbe 802 PIRSF PIRSF037119 6 789 9.8E-235 T 29-03-2018 IPR017116 Signal transduction histidine kinase, PgtB CVS42_RS00215 168f5ef5f44690f5624ffb04f1944cbe 802 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 681 784 1.1E-10 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00215 168f5ef5f44690f5624ffb04f1944cbe 802 Gene3D G3DSA:1.10.287.130 541 619 1.9E-7 T 29-03-2018 CVS42_RS00215 168f5ef5f44690f5624ffb04f1944cbe 802 SUPERFAMILY SSF158472 350 400 2.48E-5 T 29-03-2018 CVS42_RS00215 168f5ef5f44690f5624ffb04f1944cbe 802 SUPERFAMILY SSF55874 636 785 4.98E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00215 168f5ef5f44690f5624ffb04f1944cbe 802 SMART SM00388 569 637 0.0011 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS00215 168f5ef5f44690f5624ffb04f1944cbe 802 Gene3D G3DSA:3.30.565.10 620 785 4.0E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00215 168f5ef5f44690f5624ffb04f1944cbe 802 PRINTS PR00344 Bacterial sensor protein C-terminal signature 738 748 8.0E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS00215 168f5ef5f44690f5624ffb04f1944cbe 802 PRINTS PR00344 Bacterial sensor protein C-terminal signature 749 767 8.0E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS00215 168f5ef5f44690f5624ffb04f1944cbe 802 PRINTS PR00344 Bacterial sensor protein C-terminal signature 720 734 8.0E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS00215 168f5ef5f44690f5624ffb04f1944cbe 802 Pfam PF13426 PAS domain 415 513 8.2E-8 T 29-03-2018 IPR000014 PAS domain CVS42_RS00215 168f5ef5f44690f5624ffb04f1944cbe 802 Pfam PF00512 His Kinase A (phospho-acceptor) domain 571 634 1.3E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS00215 168f5ef5f44690f5624ffb04f1944cbe 802 SUPERFAMILY SSF47384 557 634 3.92E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS03380 1b2808489b15a4a7a2da61be2a9a3041 458 Gene3D G3DSA:3.40.640.10 113 358 1.1E-39 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS03380 1b2808489b15a4a7a2da61be2a9a3041 458 Pfam PF00155 Aminotransferase class I and II 126 379 2.1E-14 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CVS42_RS03380 1b2808489b15a4a7a2da61be2a9a3041 458 Gene3D G3DSA:3.90.1150.10 359 451 3.1E-14 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS03380 1b2808489b15a4a7a2da61be2a9a3041 458 SMART SM00345 19 78 4.2E-13 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS03380 1b2808489b15a4a7a2da61be2a9a3041 458 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 78 7.3E-13 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS03380 1b2808489b15a4a7a2da61be2a9a3041 458 SUPERFAMILY SSF46785 13 82 1.11E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS03380 1b2808489b15a4a7a2da61be2a9a3041 458 SUPERFAMILY SSF53383 79 449 3.13E-70 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS03380 1b2808489b15a4a7a2da61be2a9a3041 458 Gene3D G3DSA:1.10.10.10 10 80 8.7E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS22115 73817c8632a74fe07bccb1942add52c3 462 Gene3D G3DSA:3.40.50.300 78 349 1.7E-89 T 29-03-2018 CVS42_RS22115 73817c8632a74fe07bccb1942add52c3 462 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 344 1.3E-63 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS22115 73817c8632a74fe07bccb1942add52c3 462 Gene3D G3DSA:2.40.10.170 1 77 7.7E-27 T 29-03-2018 CVS42_RS22115 73817c8632a74fe07bccb1942add52c3 462 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 462 9.1E-259 T 29-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CVS42_RS22115 73817c8632a74fe07bccb1942add52c3 462 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 75 1.7E-16 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS22115 73817c8632a74fe07bccb1942add52c3 462 Gene3D G3DSA:1.10.1140.10 350 460 4.0E-45 T 29-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS22115 73817c8632a74fe07bccb1942add52c3 462 SUPERFAMILY SSF52540 79 350 2.57E-90 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS22115 73817c8632a74fe07bccb1942add52c3 462 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 462 56.441 T 29-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CVS42_RS22115 73817c8632a74fe07bccb1942add52c3 462 SUPERFAMILY SSF47917 347 461 2.38E-54 T 29-03-2018 CVS42_RS22115 73817c8632a74fe07bccb1942add52c3 462 SMART SM00382 144 329 0.0037 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS22115 73817c8632a74fe07bccb1942add52c3 462 SUPERFAMILY SSF50615 1 76 1.28E-23 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS22115 73817c8632a74fe07bccb1942add52c3 462 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 335 344 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS06970 8d4ee037ae4d8465a11e64c46f2f9943 367 Gene3D G3DSA:3.40.50.620 190 328 2.1E-28 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS06970 8d4ee037ae4d8465a11e64c46f2f9943 367 Pfam PF02698 DUF218 domain 196 311 8.2E-20 T 29-03-2018 IPR003848 Domain of unknown function DUF218 CVS42_RS06970 8d4ee037ae4d8465a11e64c46f2f9943 367 Gene3D G3DSA:1.25.40.10 24 189 3.9E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS06970 8d4ee037ae4d8465a11e64c46f2f9943 367 SUPERFAMILY SSF48452 60 157 2.92E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS02305 00ee2f4f64682a9dfb6da0a3497b27ca 195 SMART SM00987 28 185 4.2E-33 T 29-03-2018 CVS42_RS02305 00ee2f4f64682a9dfb6da0a3497b27ca 195 Gene3D G3DSA:3.40.470.10 1 195 1.9E-53 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CVS42_RS02305 00ee2f4f64682a9dfb6da0a3497b27ca 195 Pfam PF03167 Uracil DNA glycosylase superfamily 31 184 1.1E-23 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CVS42_RS02305 00ee2f4f64682a9dfb6da0a3497b27ca 195 SMART SM00986 28 185 4.2E-33 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CVS42_RS02305 00ee2f4f64682a9dfb6da0a3497b27ca 195 SUPERFAMILY SSF52141 4 191 1.11E-57 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CVS42_RS14995 fcd0babefa758a6e1f931db9f606a5ba 575 PIRSF PIRSF000732 1 574 7.3E-223 T 29-03-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 CVS42_RS14995 fcd0babefa758a6e1f931db9f606a5ba 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CVS42_RS14995 fcd0babefa758a6e1f931db9f606a5ba 575 SUPERFAMILY SSF51621 249 549 6.81E-113 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CVS42_RS14995 fcd0babefa758a6e1f931db9f606a5ba 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 5.1E-249 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CVS42_RS14995 fcd0babefa758a6e1f931db9f606a5ba 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.2E-30 T 29-03-2018 CVS42_RS14995 fcd0babefa758a6e1f931db9f606a5ba 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 2.2E-30 T 29-03-2018 CVS42_RS14995 fcd0babefa758a6e1f931db9f606a5ba 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.2E-30 T 29-03-2018 CVS42_RS14995 fcd0babefa758a6e1f931db9f606a5ba 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 2.2E-30 T 29-03-2018 CVS42_RS14995 fcd0babefa758a6e1f931db9f606a5ba 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 251 541 2.3E-127 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CVS42_RS14995 fcd0babefa758a6e1f931db9f606a5ba 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.6E-32 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CVS42_RS14995 fcd0babefa758a6e1f931db9f606a5ba 575 Gene3D G3DSA:1.10.274.10 24 136 7.5E-37 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CVS42_RS14995 fcd0babefa758a6e1f931db9f606a5ba 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.6E-22 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CVS42_RS14995 fcd0babefa758a6e1f931db9f606a5ba 575 Gene3D G3DSA:3.20.20.60 255 573 3.2E-103 T 29-03-2018 CVS42_RS14995 fcd0babefa758a6e1f931db9f606a5ba 575 Gene3D G3DSA:3.50.30.10 137 254 6.0E-30 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CVS42_RS14995 fcd0babefa758a6e1f931db9f606a5ba 575 SUPERFAMILY SSF52009 125 246 1.44E-36 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CVS42_RS14995 fcd0babefa758a6e1f931db9f606a5ba 575 SUPERFAMILY SSF47831 23 143 1.96E-34 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CVS42_RS14995 fcd0babefa758a6e1f931db9f606a5ba 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CVS42_RS03400 c4054f147b05fa41fa06ae90c5cb1dcf 368 SUPERFAMILY SSF69593 86 317 3.01E-8 T 29-03-2018 CVS42_RS03400 c4054f147b05fa41fa06ae90c5cb1dcf 368 Gene3D G3DSA:3.40.1130.10 53 333 9.2E-21 T 29-03-2018 CVS42_RS03400 c4054f147b05fa41fa06ae90c5cb1dcf 368 Pfam PF01553 Acyltransferase 91 201 4.1E-9 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CVS42_RS17565 42ed7235c6ba9d3c8c1ec3e52d9ff506 199 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 45.062 T 29-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CVS42_RS17565 42ed7235c6ba9d3c8c1ec3e52d9ff506 199 Pfam PF00694 Aconitase C-terminal domain 1 125 2.4E-39 T 29-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS17565 42ed7235c6ba9d3c8c1ec3e52d9ff506 199 Gene3D G3DSA:3.20.19.10 1 176 1.7E-50 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CVS42_RS17565 42ed7235c6ba9d3c8c1ec3e52d9ff506 199 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 3.1E-94 T 29-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CVS42_RS17565 42ed7235c6ba9d3c8c1ec3e52d9ff506 199 SUPERFAMILY SSF52016 1 195 4.71E-62 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CVS42_RS11730 d35db2506b50b6b118172dd54b668911 238 Gene3D G3DSA:3.40.630.30 39 221 4.2E-7 T 29-03-2018 CVS42_RS11730 d35db2506b50b6b118172dd54b668911 238 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 104 225 2.6E-36 T 29-03-2018 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7799 CVS42_RS11730 d35db2506b50b6b118172dd54b668911 238 SUPERFAMILY SSF55729 81 233 2.54E-21 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS11730 d35db2506b50b6b118172dd54b668911 238 PIRSF PIRSF037208 1 238 3.1E-84 T 29-03-2018 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MetaCyc: PWY-7799 CVS42_RS11730 d35db2506b50b6b118172dd54b668911 238 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 234 39.21 T 29-03-2018 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MetaCyc: PWY-7799 CVS42_RS11730 d35db2506b50b6b118172dd54b668911 238 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 15 85 7.7E-18 T 29-03-2018 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7799 CVS42_RS22160 cbf8bb1bb8250da522fbee20c43e8d26 267 SUPERFAMILY SSF52540 2 256 7.81E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS22160 cbf8bb1bb8250da522fbee20c43e8d26 267 PIRSF PIRSF009320 2 99 9.9E-15 T 29-03-2018 CVS42_RS22160 cbf8bb1bb8250da522fbee20c43e8d26 267 PIRSF PIRSF009320 93 262 2.0E-8 T 29-03-2018 CVS42_RS22160 cbf8bb1bb8250da522fbee20c43e8d26 267 Pfam PF13614 AAA domain 2 178 3.7E-64 T 29-03-2018 IPR025669 AAA domain CVS42_RS22160 cbf8bb1bb8250da522fbee20c43e8d26 267 Gene3D G3DSA:3.40.50.300 2 267 4.8E-61 T 29-03-2018 CVS42_RS20160 88c412b6f623e5bddef0235f203e2e9e 165 Gene3D G3DSA:3.40.630.30 1 155 8.7E-23 T 29-03-2018 CVS42_RS20160 88c412b6f623e5bddef0235f203e2e9e 165 Pfam PF13302 Acetyltransferase (GNAT) domain 6 145 1.1E-23 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS20160 88c412b6f623e5bddef0235f203e2e9e 165 SUPERFAMILY SSF55729 2 147 1.56E-32 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS02240 a4a8777d6cdff93eb2442c579d50ce5a 292 SUPERFAMILY SSF51735 1 153 3.2E-28 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS02240 a4a8777d6cdff93eb2442c579d50ce5a 292 PIRSF PIRSF000103 1 292 3.5E-39 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CVS42_RS02240 a4a8777d6cdff93eb2442c579d50ce5a 292 Gene3D G3DSA:1.10.1040.10 159 290 1.3E-7 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CVS42_RS02240 a4a8777d6cdff93eb2442c579d50ce5a 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 156 2.4E-22 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CVS42_RS02240 a4a8777d6cdff93eb2442c579d50ce5a 292 Gene3D G3DSA:3.40.50.720 1 158 3.4E-25 T 29-03-2018 CVS42_RS02240 a4a8777d6cdff93eb2442c579d50ce5a 292 SUPERFAMILY SSF48179 163 289 9.86E-5 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CVS42_RS00885 1b6542cd077c0377f3db66f4dc98c168 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 30.056 T 29-03-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS00885 1b6542cd077c0377f3db66f4dc98c168 71 SUPERFAMILY SSF143800 1 67 7.46E-28 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS00885 1b6542cd077c0377f3db66f4dc98c168 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 9.4E-22 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS00885 1b6542cd077c0377f3db66f4dc98c168 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 9.4E-22 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS00885 1b6542cd077c0377f3db66f4dc98c168 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 9.4E-22 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS00885 1b6542cd077c0377f3db66f4dc98c168 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS00885 1b6542cd077c0377f3db66f4dc98c168 71 Pfam PF01197 Ribosomal protein L31 1 65 1.4E-29 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS00885 1b6542cd077c0377f3db66f4dc98c168 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 4.4E-33 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS15975 67cf510dbb86fe89e73e9a6977099df7 320 TIGRFAM TIGR00874 talAB: transaldolase 8 319 6.1E-158 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CVS42_RS15975 67cf510dbb86fe89e73e9a6977099df7 320 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 18 315 1.3E-101 T 29-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CVS42_RS15975 67cf510dbb86fe89e73e9a6977099df7 320 SUPERFAMILY SSF51569 5 319 5.97E-115 T 29-03-2018 CVS42_RS15975 67cf510dbb86fe89e73e9a6977099df7 320 Hamap MF_00492 Transaldolase [tal]. 6 320 52.025 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CVS42_RS15975 67cf510dbb86fe89e73e9a6977099df7 320 Gene3D G3DSA:3.20.20.70 6 320 2.1E-119 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS15975 67cf510dbb86fe89e73e9a6977099df7 320 ProSitePatterns PS01054 Transaldolase signature 1. 35 43 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CVS42_RS15975 67cf510dbb86fe89e73e9a6977099df7 320 ProSitePatterns PS00958 Transaldolase active site. 133 150 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CVS42_RS14685 1a8f4d688eec7ab1d382acfbb844265f 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 7.0E-69 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 CVS42_RS14685 1a8f4d688eec7ab1d382acfbb844265f 206 Pfam PF01300 Telomere recombination 22 198 5.3E-44 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 CVS42_RS14685 1a8f4d688eec7ab1d382acfbb844265f 206 Gene3D G3DSA:3.90.870.10 1 204 1.8E-58 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CVS42_RS14685 1a8f4d688eec7ab1d382acfbb844265f 206 SUPERFAMILY SSF55821 1 203 1.56E-63 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CVS42_RS00230 df6684ffc80399d1d8cba3b4586df874 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 259 2.6E-67 T 29-03-2018 IPR000150 Cof family GO:0016787 CVS42_RS00230 df6684ffc80399d1d8cba3b4586df874 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 230 8.5E-35 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CVS42_RS00230 df6684ffc80399d1d8cba3b4586df874 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 211 233 - T 29-03-2018 CVS42_RS00230 df6684ffc80399d1d8cba3b4586df874 271 SUPERFAMILY SSF56784 1 263 1.65E-76 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS00230 df6684ffc80399d1d8cba3b4586df874 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 259 1.6E-69 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS00230 df6684ffc80399d1d8cba3b4586df874 271 Gene3D G3DSA:3.40.50.1000 1 269 1.1E-39 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS00230 df6684ffc80399d1d8cba3b4586df874 271 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 29-03-2018 CVS42_RS20765 7a62958d30dfeeb0e653f1b8d7bbb3bd 218 SMART SM00862 145 216 7.9E-27 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS20765 7a62958d30dfeeb0e653f1b8d7bbb3bd 218 SMART SM00448 1 112 1.7E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS20765 7a62958d30dfeeb0e653f1b8d7bbb3bd 218 Gene3D G3DSA:1.10.10.10 119 218 2.1E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20765 7a62958d30dfeeb0e653f1b8d7bbb3bd 218 SUPERFAMILY SSF52172 1 181 2.57E-37 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS20765 7a62958d30dfeeb0e653f1b8d7bbb3bd 218 Pfam PF00072 Response regulator receiver domain 3 112 1.6E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS20765 7a62958d30dfeeb0e653f1b8d7bbb3bd 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 3.2E-24 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS20765 7a62958d30dfeeb0e653f1b8d7bbb3bd 218 Gene3D G3DSA:3.40.50.2300 1 118 4.4E-31 T 29-03-2018 CVS42_RS19885 9c4cefb7338809aab2717aad9ea1cbfb 942 SUPERFAMILY SSF52540 613 913 4.02E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS19885 9c4cefb7338809aab2717aad9ea1cbfb 942 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS19885 9c4cefb7338809aab2717aad9ea1cbfb 942 Gene3D G3DSA:3.40.50.300 609 938 1.9E-55 T 29-03-2018 CVS42_RS19885 9c4cefb7338809aab2717aad9ea1cbfb 942 Gene3D G3DSA:1.10.8.280 286 405 9.0E-36 T 29-03-2018 CVS42_RS19885 9c4cefb7338809aab2717aad9ea1cbfb 942 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 924 0.0 T 29-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CVS42_RS19885 9c4cefb7338809aab2717aad9ea1cbfb 942 Pfam PF00005 ABC transporter 623 860 1.6E-10 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS19885 9c4cefb7338809aab2717aad9ea1cbfb 942 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.95 T 29-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CVS42_RS19885 9c4cefb7338809aab2717aad9ea1cbfb 942 Gene3D G3DSA:3.40.50.300 413 608 9.1E-23 T 29-03-2018 CVS42_RS19885 9c4cefb7338809aab2717aad9ea1cbfb 942 Gene3D G3DSA:3.40.50.300 7 35 0.0015 T 29-03-2018 CVS42_RS19885 9c4cefb7338809aab2717aad9ea1cbfb 942 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS19885 9c4cefb7338809aab2717aad9ea1cbfb 942 Gene3D G3DSA:3.30.190.20 134 248 4.6E-42 T 29-03-2018 CVS42_RS19885 9c4cefb7338809aab2717aad9ea1cbfb 942 SUPERFAMILY SSF52540 5 204 8.5E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS19885 9c4cefb7338809aab2717aad9ea1cbfb 942 SUPERFAMILY SSF52540 448 570 8.5E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS19885 9c4cefb7338809aab2717aad9ea1cbfb 942 Gene3D G3DSA:3.40.50.300 36 133 1.6E-4 T 29-03-2018 CVS42_RS02140 445ab9addbbc66f6513e0de364029640 422 PRINTS PR00084 Mannitol dehydrogenase signature 191 204 5.0E-17 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CVS42_RS02140 445ab9addbbc66f6513e0de364029640 422 PRINTS PR00084 Mannitol dehydrogenase signature 44 54 5.0E-17 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CVS42_RS02140 445ab9addbbc66f6513e0de364029640 422 PRINTS PR00084 Mannitol dehydrogenase signature 155 168 5.0E-17 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CVS42_RS02140 445ab9addbbc66f6513e0de364029640 422 PRINTS PR00084 Mannitol dehydrogenase signature 211 226 5.0E-17 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CVS42_RS02140 445ab9addbbc66f6513e0de364029640 422 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 191 203 - T 29-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CVS42_RS02140 445ab9addbbc66f6513e0de364029640 422 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 191 413 3.6E-58 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CVS42_RS02140 445ab9addbbc66f6513e0de364029640 422 SUPERFAMILY SSF48179 245 422 5.44E-46 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CVS42_RS02140 445ab9addbbc66f6513e0de364029640 422 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 42 164 1.5E-23 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CVS42_RS02140 445ab9addbbc66f6513e0de364029640 422 Gene3D G3DSA:1.10.1040.10 248 422 1.5E-48 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CVS42_RS02140 445ab9addbbc66f6513e0de364029640 422 SUPERFAMILY SSF51735 42 243 6.56E-42 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS02140 445ab9addbbc66f6513e0de364029640 422 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 42 419 40.909 T 29-03-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CVS42_RS02140 445ab9addbbc66f6513e0de364029640 422 Gene3D G3DSA:3.40.50.720 119 241 1.3E-26 T 29-03-2018 CVS42_RS02140 445ab9addbbc66f6513e0de364029640 422 Gene3D G3DSA:3.40.50.720 28 118 4.4E-7 T 29-03-2018 CVS42_RS00915 900e10beb55efdd97da9a7160d2fc1ae 290 PIRSF PIRSF035875 10 288 8.0E-60 T 29-03-2018 IPR017039 Virulence factor BrkB CVS42_RS00915 900e10beb55efdd97da9a7160d2fc1ae 290 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 23 281 1.1E-86 T 29-03-2018 IPR017039 Virulence factor BrkB CVS42_RS00915 900e10beb55efdd97da9a7160d2fc1ae 290 Pfam PF03631 Virulence factor BrkB 32 278 7.2E-58 T 29-03-2018 IPR017039 Virulence factor BrkB CVS42_RS00915 900e10beb55efdd97da9a7160d2fc1ae 290 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 13 288 24.346 T 29-03-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial CVS42_RS06365 5aa83e7752dca5f3bfced265be7027f0 570 SUPERFAMILY SSF158472 178 225 1.23E-7 T 29-03-2018 CVS42_RS06365 5aa83e7752dca5f3bfced265be7027f0 570 SUPERFAMILY SSF55874 455 563 7.47E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06365 5aa83e7752dca5f3bfced265be7027f0 570 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 38 128 8.7E-17 T 29-03-2018 IPR029095 NarX-like, N-terminal CVS42_RS06365 5aa83e7752dca5f3bfced265be7027f0 570 Pfam PF07730 Histidine kinase 367 431 2.7E-18 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CVS42_RS06365 5aa83e7752dca5f3bfced265be7027f0 570 Gene3D G3DSA:3.30.450.40 214 393 5.1E-4 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS06365 5aa83e7752dca5f3bfced265be7027f0 570 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 564 8.2E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06365 5aa83e7752dca5f3bfced265be7027f0 570 Gene3D G3DSA:3.30.565.10 395 565 2.4E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06365 5aa83e7752dca5f3bfced265be7027f0 570 SMART SM00387 472 566 8.0E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06365 5aa83e7752dca5f3bfced265be7027f0 570 PIRSF PIRSF003167 1 299 1.7E-70 T 29-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 CVS42_RS06365 5aa83e7752dca5f3bfced265be7027f0 570 PIRSF PIRSF003167 289 570 4.6E-91 T 29-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 CVS42_RS06365 5aa83e7752dca5f3bfced265be7027f0 570 SMART SM00304 176 228 2.9E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS06365 5aa83e7752dca5f3bfced265be7027f0 570 Pfam PF00672 HAMP domain 178 223 3.5E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS07480 bb10fa0d27511bd2ef6fa25c48ca6aa4 328 Gene3D G3DSA:3.40.50.720 137 300 9.4E-25 T 29-03-2018 CVS42_RS07480 bb10fa0d27511bd2ef6fa25c48ca6aa4 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 90 5.7E-5 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CVS42_RS07480 bb10fa0d27511bd2ef6fa25c48ca6aa4 328 Gene3D G3DSA:3.90.180.10 1 136 1.6E-36 T 29-03-2018 CVS42_RS07480 bb10fa0d27511bd2ef6fa25c48ca6aa4 328 Pfam PF00107 Zinc-binding dehydrogenase 156 244 2.1E-9 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CVS42_RS07480 bb10fa0d27511bd2ef6fa25c48ca6aa4 328 SMART SM00829 13 325 1.6E-12 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CVS42_RS07480 bb10fa0d27511bd2ef6fa25c48ca6aa4 328 SUPERFAMILY SSF51735 117 266 3.84E-29 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS07480 bb10fa0d27511bd2ef6fa25c48ca6aa4 328 SUPERFAMILY SSF50129 4 151 4.87E-33 T 29-03-2018 IPR011032 GroES-like CVS42_RS00120 aabc27179354806271a23f14ae8fed18 227 SMART SM00448 2 112 2.6E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS00120 aabc27179354806271a23f14ae8fed18 227 SUPERFAMILY SSF46894 135 224 2.04E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS00120 aabc27179354806271a23f14ae8fed18 227 SUPERFAMILY SSF52172 1 169 6.4E-37 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS00120 aabc27179354806271a23f14ae8fed18 227 Gene3D G3DSA:3.40.50.2300 1 118 4.1E-31 T 29-03-2018 CVS42_RS00120 aabc27179354806271a23f14ae8fed18 227 Pfam PF00072 Response regulator receiver domain 4 113 2.1E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS00120 aabc27179354806271a23f14ae8fed18 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 1.0E-21 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS00120 aabc27179354806271a23f14ae8fed18 227 Gene3D G3DSA:1.10.10.10 119 226 1.9E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS00120 aabc27179354806271a23f14ae8fed18 227 SMART SM00862 148 224 5.6E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS05765 c76601e107ab7f10689c157070f5781d 262 Pfam PF01311 Bacterial export proteins, family 1 11 244 4.5E-53 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CVS42_RS05765 c76601e107ab7f10689c157070f5781d 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 19 40 3.1E-28 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CVS42_RS05765 c76601e107ab7f10689c157070f5781d 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 3.1E-28 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CVS42_RS05765 c76601e107ab7f10689c157070f5781d 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 3.1E-28 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CVS42_RS05765 c76601e107ab7f10689c157070f5781d 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 79 98 3.1E-28 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CVS42_RS05765 c76601e107ab7f10689c157070f5781d 262 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 4 256 4.4E-82 T 29-03-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 CVS42_RS15325 7e505bdec871dde4c7b85296621fc456 717 Pfam PF13515 Fusaric acid resistance protein-like 406 524 2.0E-23 T 29-03-2018 CVS42_RS15325 7e505bdec871dde4c7b85296621fc456 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 16 699 2.6E-189 T 29-03-2018 IPR010020 Integral membrane protein, YccS/YhfK CVS42_RS15325 7e505bdec871dde4c7b85296621fc456 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 15 699 3.6E-191 T 29-03-2018 IPR010019 Integral membrane protein, YccS CVS42_RS15325 7e505bdec871dde4c7b85296621fc456 717 Pfam PF12805 FUSC-like inner membrane protein yccS 69 349 1.3E-93 T 29-03-2018 IPR032692 Integral membrane protein YccS, N-terminal CVS42_RS21815 fcf2b39a190babf135deaa2c0cd7e199 223 SUPERFAMILY SSF52964 43 144 1.44E-9 T 29-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CVS42_RS21815 fcf2b39a190babf135deaa2c0cd7e199 223 Gene3D G3DSA:3.40.50.10070 34 181 1.8E-21 T 29-03-2018 CVS42_RS21815 fcf2b39a190babf135deaa2c0cd7e199 223 Pfam PF03783 Curli production assembly/transport component CsgG 39 220 1.2E-34 T 29-03-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 CVS42_RS05350 8e39296d1628330067db32589778488c 958 PIRSF PIRSF036643 27 590 4.3E-114 T 29-03-2018 CVS42_RS05350 8e39296d1628330067db32589778488c 958 PIRSF PIRSF036643 788 958 4.9E-16 T 29-03-2018 CVS42_RS05350 8e39296d1628330067db32589778488c 958 Pfam PF00384 Molybdopterin oxidoreductase 123 574 6.4E-56 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS05350 8e39296d1628330067db32589778488c 958 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 68 117 9.9E-11 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS05350 8e39296d1628330067db32589778488c 958 Gene3D G3DSA:2.40.40.20 764 958 9.8E-36 T 29-03-2018 CVS42_RS05350 8e39296d1628330067db32589778488c 958 SUPERFAMILY SSF50692 757 787 2.03E-38 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CVS42_RS05350 8e39296d1628330067db32589778488c 958 SUPERFAMILY SSF50692 818 956 2.03E-38 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CVS42_RS05350 8e39296d1628330067db32589778488c 958 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 71 88 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CVS42_RS05350 8e39296d1628330067db32589778488c 958 Gene3D G3DSA:2.20.25.90 60 124 1.8E-14 T 29-03-2018 CVS42_RS05350 8e39296d1628330067db32589778488c 958 Pfam PF01568 Molydopterin dinucleotide binding domain 823 949 2.1E-22 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CVS42_RS05350 8e39296d1628330067db32589778488c 958 Gene3D G3DSA:3.40.50.740 125 313 1.8E-49 T 29-03-2018 CVS42_RS05350 8e39296d1628330067db32589778488c 958 SMART SM00926 66 120 3.1E-15 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS05350 8e39296d1628330067db32589778488c 958 Gene3D G3DSA:3.40.50.740 314 660 7.4E-56 T 29-03-2018 CVS42_RS05350 8e39296d1628330067db32589778488c 958 SUPERFAMILY SSF53706 64 650 3.93E-199 T 29-03-2018 CVS42_RS14705 06f419ef123e7aa40c99aa826dc90fe3 342 Gene3D G3DSA:1.20.970.10 1 66 3.4E-16 T 29-03-2018 CVS42_RS14705 06f419ef123e7aa40c99aa826dc90fe3 342 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 63 8.6E-16 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS14705 06f419ef123e7aa40c99aa826dc90fe3 342 SUPERFAMILY SSF47648 1 65 2.75E-16 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS14705 06f419ef123e7aa40c99aa826dc90fe3 342 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 332 37.853 T 29-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CVS42_RS14705 06f419ef123e7aa40c99aa826dc90fe3 342 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 330 1.8E-125 T 29-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CVS42_RS14705 06f419ef123e7aa40c99aa826dc90fe3 342 SUPERFAMILY SSF52418 70 329 1.03E-92 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS14705 06f419ef123e7aa40c99aa826dc90fe3 342 Pfam PF00591 Glycosyl transferase family, a/b domain 73 322 1.2E-100 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS14705 06f419ef123e7aa40c99aa826dc90fe3 342 Gene3D G3DSA:3.40.1030.10 68 342 1.3E-99 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 3.6E-16 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 9.9E-235 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.527 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 Gene3D G3DSA:2.40.30.10 300 393 5.7E-33 T 29-03-2018 CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 Gene3D G3DSA:2.40.30.10 206 299 1.1E-30 T 29-03-2018 CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 Gene3D G3DSA:3.40.50.300 75 203 7.3E-32 T 29-03-2018 CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 SUPERFAMILY SSF52540 9 226 2.17E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 Gene3D G3DSA:3.40.50.300 2 74 1.5E-11 T 29-03-2018 CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.2E-33 T 29-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 2.3E-14 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 SUPERFAMILY SSF50447 205 301 8.44E-29 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.3E-25 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.3E-25 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.3E-25 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.3E-25 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.3E-25 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 6.7E-58 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 SUPERFAMILY SSF50465 298 393 6.04E-36 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CVS42_RS20675 03025871f7eb1756a7313a0886493b8b 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CVS42_RS11665 0207dbe50e88866c13b0f05824a60b6b 252 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 4 243 3.2E-93 T 29-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 CVS42_RS11665 0207dbe50e88866c13b0f05824a60b6b 252 PIRSF PIRSF020736 1 248 8.4E-88 T 29-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 CVS42_RS11665 0207dbe50e88866c13b0f05824a60b6b 252 SUPERFAMILY SSF47240 100 247 4.29E-73 T 29-03-2018 IPR009078 Ferritin-like superfamily CVS42_RS11665 0207dbe50e88866c13b0f05824a60b6b 252 SUPERFAMILY SSF47240 5 55 4.29E-73 T 29-03-2018 IPR009078 Ferritin-like superfamily CVS42_RS11665 0207dbe50e88866c13b0f05824a60b6b 252 Gene3D G3DSA:1.20.1260.10 1 251 1.3E-72 T 29-03-2018 IPR012347 Ferritin-related CVS42_RS18770 105568d5645b3ee0c6dacdcaa7459dc7 307 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 293 2.4E-132 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CVS42_RS18770 105568d5645b3ee0c6dacdcaa7459dc7 307 Gene3D G3DSA:3.30.230.20 1 128 1.5E-49 T 29-03-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CVS42_RS18770 105568d5645b3ee0c6dacdcaa7459dc7 307 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 281 45.776 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CVS42_RS18770 105568d5645b3ee0c6dacdcaa7459dc7 307 SUPERFAMILY SSF54211 134 279 2.73E-51 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS18770 105568d5645b3ee0c6dacdcaa7459dc7 307 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 277 3.5E-108 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CVS42_RS18770 105568d5645b3ee0c6dacdcaa7459dc7 307 SUPERFAMILY SSF54211 3 125 2.81E-42 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS18770 105568d5645b3ee0c6dacdcaa7459dc7 307 Gene3D G3DSA:3.30.1700.10 129 301 9.7E-67 T 29-03-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CVS42_RS06440 b64f2230ffb1b73e6b8c96f9e34a84f7 360 SUPERFAMILY SSF52540 17 225 5.65E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS06440 b64f2230ffb1b73e6b8c96f9e34a84f7 360 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 12 356 1.6E-93 T 29-03-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 CVS42_RS06440 b64f2230ffb1b73e6b8c96f9e34a84f7 360 Gene3D G3DSA:3.40.50.300 18 281 6.8E-53 T 29-03-2018 CVS42_RS06440 b64f2230ffb1b73e6b8c96f9e34a84f7 360 SMART SM00382 33 210 5.2E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS06440 b64f2230ffb1b73e6b8c96f9e34a84f7 360 Pfam PF00005 ABC transporter 28 161 1.7E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS06440 b64f2230ffb1b73e6b8c96f9e34a84f7 360 Gene3D G3DSA:2.40.50.100 282 355 1.5E-14 T 29-03-2018 CVS42_RS06440 b64f2230ffb1b73e6b8c96f9e34a84f7 360 SUPERFAMILY SSF50331 239 357 1.19E-11 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CVS42_RS06440 b64f2230ffb1b73e6b8c96f9e34a84f7 360 Pfam PF03459 TOBE domain 310 356 4.6E-10 T 29-03-2018 IPR005116 Transport-associated OB, type 1 CVS42_RS06440 b64f2230ffb1b73e6b8c96f9e34a84f7 360 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 SMART SM00388 333 398 4.0E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 SUPERFAMILY SSF55785 194 311 2.86E-9 T 29-03-2018 IPR000014 PAS domain CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 Gene3D G3DSA:3.30.450.20 202 238 0.0012 T 29-03-2018 CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 SUPERFAMILY SSF47384 318 398 4.12E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 445 553 2.7E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 Gene3D G3DSA:3.30.450.20 239 336 1.3E-14 T 29-03-2018 CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 SUPERFAMILY SSF52172 575 694 1.85E-38 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 Pfam PF00072 Response regulator receiver domain 577 686 6.4E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 SUPERFAMILY SSF55874 387 554 7.86E-49 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 Pfam PF00512 His Kinase A (phospho-acceptor) domain 333 397 3.7E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 Gene3D G3DSA:1.10.287.130 337 394 3.0E-18 T 29-03-2018 CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 495 4.8E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 553 4.8E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 509 4.8E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 534 4.8E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 SMART SM00448 575 686 8.6E-33 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 Gene3D G3DSA:3.40.50.2300 573 697 3.2E-38 T 29-03-2018 CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 Gene3D G3DSA:3.30.565.10 403 561 3.6E-49 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 Gene3D G3DSA:3.30.450.40 20 201 1.9E-8 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS06350 51caba6e128921d2cca303f60611d27d 698 SMART SM00387 445 556 7.6E-41 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS01420 5f27668fa90f1a8e3831daa2de37789b 421 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 6 420 6.3E-120 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CVS42_RS01420 5f27668fa90f1a8e3831daa2de37789b 421 Gene3D G3DSA:3.40.50.620 4 227 1.4E-65 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS01420 5f27668fa90f1a8e3831daa2de37789b 421 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS01420 5f27668fa90f1a8e3831daa2de37789b 421 Gene3D G3DSA:3.10.290.10 341 420 6.1E-14 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS01420 5f27668fa90f1a8e3831daa2de37789b 421 Gene3D G3DSA:1.10.240.10 228 331 2.1E-30 T 29-03-2018 CVS42_RS01420 5f27668fa90f1a8e3831daa2de37789b 421 SUPERFAMILY SSF55174 326 420 7.51E-16 T 29-03-2018 CVS42_RS01420 5f27668fa90f1a8e3831daa2de37789b 421 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 420 43.57 T 29-03-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 CVS42_RS01420 5f27668fa90f1a8e3831daa2de37789b 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 220 232 2.0E-31 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CVS42_RS01420 5f27668fa90f1a8e3831daa2de37789b 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 209 2.0E-31 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CVS42_RS01420 5f27668fa90f1a8e3831daa2de37789b 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 2.0E-31 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CVS42_RS01420 5f27668fa90f1a8e3831daa2de37789b 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 166 181 2.0E-31 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CVS42_RS01420 5f27668fa90f1a8e3831daa2de37789b 421 Pfam PF00579 tRNA synthetases class I (W and Y) 32 327 1.9E-81 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS01420 5f27668fa90f1a8e3831daa2de37789b 421 SUPERFAMILY SSF52374 5 327 6.03E-96 T 29-03-2018 CVS42_RS03890 f84064df7e026a6723824385f8a0f406 241 SMART SM01057 23 240 1.2E-99 T 29-03-2018 IPR001148 Alpha carbonic anhydrase CVS42_RS03890 f84064df7e026a6723824385f8a0f406 241 Gene3D G3DSA:3.10.200.10 19 241 9.8E-71 T 29-03-2018 IPR001148 Alpha carbonic anhydrase CVS42_RS03890 f84064df7e026a6723824385f8a0f406 241 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 111 127 - T 29-03-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0006730|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 CVS42_RS03890 f84064df7e026a6723824385f8a0f406 241 SUPERFAMILY SSF51069 21 240 6.02E-76 T 29-03-2018 IPR001148 Alpha carbonic anhydrase CVS42_RS03890 f84064df7e026a6723824385f8a0f406 241 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 240 2.6E-50 T 29-03-2018 IPR001148 Alpha carbonic anhydrase CVS42_RS10980 c98ee89cc310dbb157682fdbb6933002 220 Gene3D G3DSA:1.10.260.40 2 75 4.4E-21 T 29-03-2018 CVS42_RS10980 c98ee89cc310dbb157682fdbb6933002 220 Pfam PF01381 Helix-turn-helix 6 60 1.7E-17 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS10980 c98ee89cc310dbb157682fdbb6933002 220 SUPERFAMILY SSF47413 3 66 6.1E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS10980 c98ee89cc310dbb157682fdbb6933002 220 SMART SM00530 5 60 4.1E-18 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS10980 c98ee89cc310dbb157682fdbb6933002 220 Pfam PF00717 Peptidase S24-like 129 176 3.9E-12 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CVS42_RS10980 c98ee89cc310dbb157682fdbb6933002 220 SUPERFAMILY SSF51306 82 208 6.28E-20 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CVS42_RS10980 c98ee89cc310dbb157682fdbb6933002 220 Gene3D G3DSA:2.10.109.10 87 213 9.9E-17 T 29-03-2018 CVS42_RS16690 7fb594f12bdfddd656b29e7a50589dcf 252 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 29-03-2018 IPR000540 Flagellar motor protein MotA, conserved site CVS42_RS16690 7fb594f12bdfddd656b29e7a50589dcf 252 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 211 1.5E-21 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CVS42_RS06465 a0473d92b117c5e70d6830835d567baf 408 Gene3D G3DSA:2.40.340.10 330 401 9.1E-21 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CVS42_RS06465 a0473d92b117c5e70d6830835d567baf 408 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 179 315 1.5E-34 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS06465 a0473d92b117c5e70d6830835d567baf 408 Pfam PF03453 MoeA N-terminal region (domain I and II) 10 169 2.6E-47 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CVS42_RS06465 a0473d92b117c5e70d6830835d567baf 408 SUPERFAMILY SSF63867 328 407 1.02E-22 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CVS42_RS06465 a0473d92b117c5e70d6830835d567baf 408 SUPERFAMILY SSF53218 179 323 1.19E-44 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS06465 a0473d92b117c5e70d6830835d567baf 408 SUPERFAMILY SSF63882 8 177 6.28E-57 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CVS42_RS06465 a0473d92b117c5e70d6830835d567baf 408 Pfam PF03454 MoeA C-terminal region (domain IV) 332 403 6.6E-20 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CVS42_RS06465 a0473d92b117c5e70d6830835d567baf 408 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 255 288 - T 29-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CVS42_RS06465 a0473d92b117c5e70d6830835d567baf 408 Gene3D G3DSA:2.170.190.11 63 143 3.9E-30 T 29-03-2018 CVS42_RS06465 a0473d92b117c5e70d6830835d567baf 408 SMART SM00852 182 319 1.2E-45 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS06465 a0473d92b117c5e70d6830835d567baf 408 Gene3D G3DSA:3.40.980.10 152 325 4.1E-58 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS06465 a0473d92b117c5e70d6830835d567baf 408 Pfam PF00994 Probable molybdopterin binding domain 182 318 9.0E-29 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS06465 a0473d92b117c5e70d6830835d567baf 408 Gene3D G3DSA:3.90.105.10 28 62 3.7E-13 T 29-03-2018 CVS42_RS15685 90b4df0ebfeacfbc1dd02f0cca35c378 181 Gene3D G3DSA:3.30.1380.10 55 181 9.2E-23 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CVS42_RS15685 90b4df0ebfeacfbc1dd02f0cca35c378 181 SUPERFAMILY SSF55166 65 181 4.19E-32 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CVS42_RS15685 90b4df0ebfeacfbc1dd02f0cca35c378 181 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 181 7.2E-62 T 29-03-2018 IPR010275 Protein of unknown function DUF882 CVS42_RS03325 6666beacafca4966f8d0e4c019aa2db0 391 SUPERFAMILY SSF50630 38 160 7.24E-10 T 29-03-2018 IPR021109 Aspartic peptidase domain CVS42_RS03325 6666beacafca4966f8d0e4c019aa2db0 391 Gene3D G3DSA:2.40.70.10 41 177 9.1E-17 T 29-03-2018 IPR021109 Aspartic peptidase domain CVS42_RS03325 6666beacafca4966f8d0e4c019aa2db0 391 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 57 68 - T 29-03-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 CVS42_RS03325 6666beacafca4966f8d0e4c019aa2db0 391 Gene3D G3DSA:2.40.70.10 188 329 2.7E-4 T 29-03-2018 IPR021109 Aspartic peptidase domain CVS42_RS03325 6666beacafca4966f8d0e4c019aa2db0 391 SUPERFAMILY SSF50156 340 389 1.33E-5 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS03325 6666beacafca4966f8d0e4c019aa2db0 391 Gene3D G3DSA:2.30.42.10 330 391 3.2E-5 T 29-03-2018 CVS42_RS03325 6666beacafca4966f8d0e4c019aa2db0 391 Pfam PF13650 Aspartyl protease 46 152 3.8E-12 T 29-03-2018 CVS42_RS14710 db46738f78393c18cf821d008a661321 465 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 259 465 32.906 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CVS42_RS14710 db46738f78393c18cf821d008a661321 465 SUPERFAMILY SSF51366 7 257 3.3E-82 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CVS42_RS14710 db46738f78393c18cf821d008a661321 465 Pfam PF00218 Indole-3-glycerol phosphate synthase 9 256 1.5E-95 T 29-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CVS42_RS14710 db46738f78393c18cf821d008a661321 465 Gene3D G3DSA:3.20.20.70 263 465 5.0E-60 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS14710 db46738f78393c18cf821d008a661321 465 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 261 459 9.4E-51 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CVS42_RS14710 db46738f78393c18cf821d008a661321 465 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 7 258 34.643 T 29-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CVS42_RS14710 db46738f78393c18cf821d008a661321 465 Gene3D G3DSA:3.20.20.70 5 262 4.8E-64 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS14710 db46738f78393c18cf821d008a661321 465 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 54 72 - T 29-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 CVS42_RS14710 db46738f78393c18cf821d008a661321 465 SUPERFAMILY SSF51366 260 463 3.3E-57 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CVS42_RS09150 2205b1680fdeb64385e713a2207569f4 456 Pfam PF03315 Serine dehydratase beta chain 3 154 6.2E-56 T 29-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CVS42_RS09150 2205b1680fdeb64385e713a2207569f4 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 450 6.1E-218 T 29-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CVS42_RS09150 2205b1680fdeb64385e713a2207569f4 456 Gene3D G3DSA:3.30.1330.90 10 157 2.5E-50 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CVS42_RS09150 2205b1680fdeb64385e713a2207569f4 456 SUPERFAMILY SSF143548 16 156 1.54E-44 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CVS42_RS09150 2205b1680fdeb64385e713a2207569f4 456 Gene3D G3DSA:1.10.4100.10 262 441 3.7E-33 T 29-03-2018 CVS42_RS09150 2205b1680fdeb64385e713a2207569f4 456 Pfam PF03313 Serine dehydratase alpha chain 183 447 1.2E-96 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CVS42_RS04615 219b308bbef29b8093afcc13a0bd16a8 488 Gene3D G3DSA:3.40.50.980 146 308 8.2E-31 T 29-03-2018 CVS42_RS04615 219b308bbef29b8093afcc13a0bd16a8 488 Gene3D G3DSA:3.30.300.30 375 480 1.1E-11 T 29-03-2018 CVS42_RS04615 219b308bbef29b8093afcc13a0bd16a8 488 SUPERFAMILY SSF56801 2 480 3.01E-90 T 29-03-2018 CVS42_RS04615 219b308bbef29b8093afcc13a0bd16a8 488 Gene3D G3DSA:2.30.38.10 309 373 3.3E-11 T 29-03-2018 CVS42_RS04615 219b308bbef29b8093afcc13a0bd16a8 488 Pfam PF00501 AMP-binding enzyme 9 377 1.7E-58 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CVS42_RS04615 219b308bbef29b8093afcc13a0bd16a8 488 Gene3D G3DSA:3.40.50.980 1 145 1.6E-25 T 29-03-2018 CVS42_RS04615 219b308bbef29b8093afcc13a0bd16a8 488 ProSitePatterns PS00455 Putative AMP-binding domain signature. 140 151 - T 29-03-2018 IPR020845 AMP-binding, conserved site CVS42_RS19735 480204b8a60a8f33d7521aadb121a90e 412 Pfam PF01842 ACT domain 266 322 2.8E-10 T 29-03-2018 IPR002912 ACT domain CVS42_RS19735 480204b8a60a8f33d7521aadb121a90e 412 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 6.0E-5 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CVS42_RS19735 480204b8a60a8f33d7521aadb121a90e 412 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 6.0E-5 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CVS42_RS19735 480204b8a60a8f33d7521aadb121a90e 412 Pfam PF00696 Amino acid kinase family 4 229 5.8E-51 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS19735 480204b8a60a8f33d7521aadb121a90e 412 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 401 6.8E-126 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS19735 480204b8a60a8f33d7521aadb121a90e 412 SUPERFAMILY SSF55021 330 404 2.34E-23 T 29-03-2018 CVS42_RS19735 480204b8a60a8f33d7521aadb121a90e 412 SUPERFAMILY SSF53633 4 241 1.2E-74 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS19735 480204b8a60a8f33d7521aadb121a90e 412 Gene3D G3DSA:3.30.70.260 332 401 1.6E-21 T 29-03-2018 CVS42_RS19735 480204b8a60a8f33d7521aadb121a90e 412 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 401 5.3E-116 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS19735 480204b8a60a8f33d7521aadb121a90e 412 Gene3D G3DSA:3.30.70.260 235 331 2.9E-22 T 29-03-2018 CVS42_RS19735 480204b8a60a8f33d7521aadb121a90e 412 SUPERFAMILY SSF55021 247 325 6.47E-17 T 29-03-2018 CVS42_RS19735 480204b8a60a8f33d7521aadb121a90e 412 Gene3D G3DSA:3.40.1160.10 1 234 2.3E-72 T 29-03-2018 CVS42_RS19735 480204b8a60a8f33d7521aadb121a90e 412 Pfam PF13840 ACT domain 339 397 3.5E-14 T 29-03-2018 IPR027795 GATS-like ACT domain CVS42_RS19735 480204b8a60a8f33d7521aadb121a90e 412 PIRSF PIRSF000726 60 409 1.4E-134 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS19735 480204b8a60a8f33d7521aadb121a90e 412 PIRSF PIRSF000726 1 62 4.1E-21 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS19735 480204b8a60a8f33d7521aadb121a90e 412 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS04415 e996df439adf05c3a680037fd6a78d57 640 Gene3D G3DSA:3.40.710.10 251 618 1.2E-82 T 29-03-2018 CVS42_RS04415 e996df439adf05c3a680037fd6a78d57 640 SUPERFAMILY SSF56601 255 616 1.52E-89 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CVS42_RS04415 e996df439adf05c3a680037fd6a78d57 640 SUPERFAMILY SSF56519 57 253 3.92E-52 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CVS42_RS04415 e996df439adf05c3a680037fd6a78d57 640 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 616 1.8E-231 T 29-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 CVS42_RS04415 e996df439adf05c3a680037fd6a78d57 640 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 613 2.2E-71 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CVS42_RS04415 e996df439adf05c3a680037fd6a78d57 640 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 240 6.3E-45 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CVS42_RS04415 e996df439adf05c3a680037fd6a78d57 640 Gene3D G3DSA:3.90.1310.10 34 250 1.8E-53 T 29-03-2018 CVS42_RS17940 37f9d409b9714dee64b145f41be08c7d 76 Gene3D G3DSA:4.10.640.10 1 76 1.9E-31 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17940 37f9d409b9714dee64b145f41be08c7d 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.004 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17940 37f9d409b9714dee64b145f41be08c7d 76 Pfam PF01084 Ribosomal protein S18 18 68 1.4E-25 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17940 37f9d409b9714dee64b145f41be08c7d 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 29-03-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17940 37f9d409b9714dee64b145f41be08c7d 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 1.9E-37 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17940 37f9d409b9714dee64b145f41be08c7d 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.0E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17940 37f9d409b9714dee64b145f41be08c7d 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.0E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17940 37f9d409b9714dee64b145f41be08c7d 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.0E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17940 37f9d409b9714dee64b145f41be08c7d 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.0E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17940 37f9d409b9714dee64b145f41be08c7d 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 72 3.0E-22 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17940 37f9d409b9714dee64b145f41be08c7d 76 SUPERFAMILY SSF46911 3 72 9.81E-29 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS04800 09ef5adc846cbfd94e069aa95ec52647 222 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 11 221 2.2E-67 T 29-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CVS42_RS04800 09ef5adc846cbfd94e069aa95ec52647 222 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 94 191 6.9E-13 T 29-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CVS42_RS04800 09ef5adc846cbfd94e069aa95ec52647 222 Gene3D G3DSA:3.40.50.1000 5 37 0.26 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS04800 09ef5adc846cbfd94e069aa95ec52647 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 1.1E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS04800 09ef5adc846cbfd94e069aa95ec52647 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 1.1E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS04800 09ef5adc846cbfd94e069aa95ec52647 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 8 19 1.1E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS04800 09ef5adc846cbfd94e069aa95ec52647 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 1.1E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS04800 09ef5adc846cbfd94e069aa95ec52647 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 191 1.7E-36 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS04800 09ef5adc846cbfd94e069aa95ec52647 222 Gene3D G3DSA:1.10.150.240 38 79 5.1E-21 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CVS42_RS04800 09ef5adc846cbfd94e069aa95ec52647 222 SUPERFAMILY SSF56784 8 221 7.37E-63 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS04800 09ef5adc846cbfd94e069aa95ec52647 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 108 186 1.9E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS04800 09ef5adc846cbfd94e069aa95ec52647 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 191 7.3E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS04800 09ef5adc846cbfd94e069aa95ec52647 222 Gene3D G3DSA:3.40.50.1000 80 221 2.3E-38 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS04800 09ef5adc846cbfd94e069aa95ec52647 222 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 8 222 33.294 T 29-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CVS42_RS10500 fc4e75397790c1cd1e6637f9f693e16f 54 PIRSF PIRSF037205 1 50 1.2E-25 T 29-03-2018 IPR017136 Uncharacterised conserved protein UCP037205 CVS42_RS10500 fc4e75397790c1cd1e6637f9f693e16f 54 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 3 41 1.5E-22 T 29-03-2018 IPR017136 Uncharacterised conserved protein UCP037205 CVS42_RS10500 fc4e75397790c1cd1e6637f9f693e16f 54 Gene3D G3DSA:3.30.50.10 5 53 9.4E-12 T 29-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 CVS42_RS03930 5c670e793801c58461928929e1d5874a 266 Gene3D G3DSA:3.40.50.150 1 266 2.7E-31 T 29-03-2018 CVS42_RS03930 5c670e793801c58461928929e1d5874a 266 PIRSF PIRSF018249 1 265 2.9E-47 T 29-03-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 CVS42_RS03930 5c670e793801c58461928929e1d5874a 266 Pfam PF13649 Methyltransferase domain 88 156 1.3E-6 T 29-03-2018 CVS42_RS03930 5c670e793801c58461928929e1d5874a 266 SUPERFAMILY SSF53335 4 248 1.75E-23 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS19405 76607f14f9ba44a0dcbf4683e9410668 680 Gene3D G3DSA:2.170.130.10 23 158 1.7E-26 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS19405 76607f14f9ba44a0dcbf4683e9410668 680 Pfam PF00593 TonB dependent receptor 228 679 1.1E-53 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS19405 76607f14f9ba44a0dcbf4683e9410668 680 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 663 680 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site CVS42_RS19405 76607f14f9ba44a0dcbf4683e9410668 680 Gene3D G3DSA:2.40.170.20 159 680 1.8E-77 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS19405 76607f14f9ba44a0dcbf4683e9410668 680 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 146 4.7E-20 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS19405 76607f14f9ba44a0dcbf4683e9410668 680 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 54 680 2.1E-104 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CVS42_RS19405 76607f14f9ba44a0dcbf4683e9410668 680 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 34 - T 29-03-2018 IPR010916 TonB box, conserved site CVS42_RS19405 76607f14f9ba44a0dcbf4683e9410668 680 SUPERFAMILY SSF56935 43 680 1.5E-124 T 29-03-2018 CVS42_RS05235 e914d7fc809d182f3b33157acb823f18 282 Gene3D G3DSA:3.20.20.150 1 280 3.4E-76 T 29-03-2018 CVS42_RS05235 e914d7fc809d182f3b33157acb823f18 282 SUPERFAMILY SSF51658 26 204 7.79E-5 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CVS42_RS05235 e914d7fc809d182f3b33157acb823f18 282 Pfam PF05114 Protein of unknown function (DUF692) 5 267 2.9E-99 T 29-03-2018 IPR007801 Uncharacterised protein family UPF0276 CVS42_RS08885 2e1379ea884b21dbfbee82cf881d6d8a 412 SMART SM00267 230 395 9.7E-35 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS08885 2e1379ea884b21dbfbee82cf881d6d8a 412 Pfam PF00990 Diguanylate cyclase, GGDEF domain 241 391 3.1E-31 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS08885 2e1379ea884b21dbfbee82cf881d6d8a 412 SUPERFAMILY SSF55073 246 394 6.28E-33 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS08885 2e1379ea884b21dbfbee82cf881d6d8a 412 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 237 395 2.0E-31 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS08885 2e1379ea884b21dbfbee82cf881d6d8a 412 Gene3D G3DSA:3.30.70.270 235 403 1.0E-42 T 29-03-2018 CVS42_RS11680 5da3b3efd3b761b57b55ce43c9be97bc 431 SUPERFAMILY SSF46589 1 112 1.15E-25 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 CVS42_RS11680 5da3b3efd3b761b57b55ce43c9be97bc 431 PIRSF PIRSF001529 1 431 1.2E-174 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CVS42_RS11680 5da3b3efd3b761b57b55ce43c9be97bc 431 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 233 407 6.4E-34 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS11680 5da3b3efd3b761b57b55ce43c9be97bc 431 PRINTS PR00981 Seryl-tRNA synthetase signature 342 358 1.3E-33 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CVS42_RS11680 5da3b3efd3b761b57b55ce43c9be97bc 431 PRINTS PR00981 Seryl-tRNA synthetase signature 273 285 1.3E-33 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CVS42_RS11680 5da3b3efd3b761b57b55ce43c9be97bc 431 PRINTS PR00981 Seryl-tRNA synthetase signature 285 298 1.3E-33 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CVS42_RS11680 5da3b3efd3b761b57b55ce43c9be97bc 431 PRINTS PR00981 Seryl-tRNA synthetase signature 360 376 1.3E-33 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CVS42_RS11680 5da3b3efd3b761b57b55ce43c9be97bc 431 PRINTS PR00981 Seryl-tRNA synthetase signature 325 338 1.3E-33 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CVS42_RS11680 5da3b3efd3b761b57b55ce43c9be97bc 431 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 3.2E-28 T 29-03-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 CVS42_RS11680 5da3b3efd3b761b57b55ce43c9be97bc 431 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 424 4.6E-166 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CVS42_RS11680 5da3b3efd3b761b57b55ce43c9be97bc 431 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 429 39.744 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CVS42_RS11680 5da3b3efd3b761b57b55ce43c9be97bc 431 Gene3D G3DSA:3.30.930.10 105 431 1.7E-92 T 29-03-2018 CVS42_RS11680 5da3b3efd3b761b57b55ce43c9be97bc 431 SUPERFAMILY SSF55681 116 427 4.15E-97 T 29-03-2018 CVS42_RS11680 5da3b3efd3b761b57b55ce43c9be97bc 431 Gene3D G3DSA:1.10.287.40 2 104 4.3E-22 T 29-03-2018 CVS42_RS21125 eec917e43b3521943be91b151fc1345c 446 Pfam PF02646 RmuC family 132 428 6.5E-105 T 29-03-2018 IPR003798 DNA recombination RmuC CVS42_RS21125 eec917e43b3521943be91b151fc1345c 446 Gene3D G3DSA:1.20.5.340 142 293 2.6E-21 T 29-03-2018 CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 SUPERFAMILY SSF50621 254 414 1.07E-51 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 Gene3D G3DSA:2.40.37.10 267 414 9.6E-43 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 1.0E-31 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 1.0E-31 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 299 317 1.0E-31 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 1.0E-31 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 4.9E-27 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 4.9E-27 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 4.9E-27 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 4.9E-27 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 271 290 4.9E-27 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 6.4E-23 T 29-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 SUPERFAMILY SSF51419 27 283 3.78E-80 T 29-03-2018 IPR029066 PLP-binding barrel CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 412 5.2E-164 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 29-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.955 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 281 1.8E-72 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CVS42_RS19320 f3638cb67682b3a038560b5c22dd76eb 416 Gene3D G3DSA:3.20.20.10 35 266 1.1E-61 T 29-03-2018 IPR029066 PLP-binding barrel CVS42_RS07010 ca1f3818d9c99949eeb77deca93a2e43 443 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 92 397 4.4E-61 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CVS42_RS07010 ca1f3818d9c99949eeb77deca93a2e43 443 SUPERFAMILY SSF53686 93 438 1.0E-51 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CVS42_RS07010 ca1f3818d9c99949eeb77deca93a2e43 443 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 11 438 1.0E-220 T 29-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 CVS42_RS07010 ca1f3818d9c99949eeb77deca93a2e43 443 Gene3D G3DSA:3.40.50.1100 231 443 3.6E-28 T 29-03-2018 CVS42_RS07010 ca1f3818d9c99949eeb77deca93a2e43 443 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 443 271.941 T 29-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 CVS42_RS07010 ca1f3818d9c99949eeb77deca93a2e43 443 Gene3D G3DSA:3.40.50.1100 115 230 2.2E-24 T 29-03-2018 CVS42_RS07010 ca1f3818d9c99949eeb77deca93a2e43 443 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CVS42_RS10035 a08288e2ead35de34cfce7022593c93f 208 Pfam PF04403 Paraquat-inducible protein A 47 197 2.4E-31 T 29-03-2018 IPR007498 Paraquat-inducible protein A CVS42_RS04675 2627e28079714ceface496d46ef3955d 132 Pfam PF02300 Fumarate reductase subunit C 6 131 2.0E-50 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CVS42_RS04675 2627e28079714ceface496d46ef3955d 132 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 109 3.0E-18 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CVS42_RS04675 2627e28079714ceface496d46ef3955d 132 PIRSF PIRSF000180 5 132 2.2E-40 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CVS42_RS04675 2627e28079714ceface496d46ef3955d 132 SUPERFAMILY SSF81343 6 131 4.58E-43 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS04675 2627e28079714ceface496d46ef3955d 132 Gene3D G3DSA:1.20.1300.10 6 131 3.3E-50 T 29-03-2018 CVS42_RS09565 5eafda16e88d762856ce78b42b7169f8 767 SUPERFAMILY SSF51998 232 750 7.32E-168 T 29-03-2018 CVS42_RS09565 5eafda16e88d762856ce78b42b7169f8 767 Pfam PF02867 Ribonucleotide reductase, barrel domain 686 741 2.5E-7 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS09565 5eafda16e88d762856ce78b42b7169f8 767 Pfam PF02867 Ribonucleotide reductase, barrel domain 233 673 6.5E-112 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS09565 5eafda16e88d762856ce78b42b7169f8 767 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 609 631 - T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS09565 5eafda16e88d762856ce78b42b7169f8 767 Pfam PF03477 ATP cone domain 16 102 1.9E-15 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CVS42_RS09565 5eafda16e88d762856ce78b42b7169f8 767 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 155 745 7.0E-178 T 29-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS09565 5eafda16e88d762856ce78b42b7169f8 767 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 152 229 4.1E-15 T 29-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS09565 5eafda16e88d762856ce78b42b7169f8 767 Gene3D G3DSA:3.20.70.20 131 749 3.3E-151 T 29-03-2018 CVS42_RS09565 5eafda16e88d762856ce78b42b7169f8 767 PRINTS PR01183 Ribonucleotide reductase large chain signature 549 572 9.9E-38 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS09565 5eafda16e88d762856ce78b42b7169f8 767 PRINTS PR01183 Ribonucleotide reductase large chain signature 308 327 9.9E-38 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS09565 5eafda16e88d762856ce78b42b7169f8 767 PRINTS PR01183 Ribonucleotide reductase large chain signature 443 454 9.9E-38 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS09565 5eafda16e88d762856ce78b42b7169f8 767 PRINTS PR01183 Ribonucleotide reductase large chain signature 483 506 9.9E-38 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS09565 5eafda16e88d762856ce78b42b7169f8 767 PRINTS PR01183 Ribonucleotide reductase large chain signature 620 647 9.9E-38 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS09565 5eafda16e88d762856ce78b42b7169f8 767 PRINTS PR01183 Ribonucleotide reductase large chain signature 521 543 9.9E-38 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS09565 5eafda16e88d762856ce78b42b7169f8 767 SUPERFAMILY SSF48168 20 231 1.44E-75 T 29-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS18285 ba941ac717c206fa5425da48b25a086c 246 Gene3D G3DSA:3.40.50.300 2 246 1.7E-61 T 29-03-2018 CVS42_RS18285 ba941ac717c206fa5425da48b25a086c 246 PIRSF PIRSF039085 1 246 4.5E-86 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CVS42_RS18285 ba941ac717c206fa5425da48b25a086c 246 Pfam PF00005 ABC transporter 18 174 5.8E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS18285 ba941ac717c206fa5425da48b25a086c 246 SUPERFAMILY SSF52540 5 240 2.42E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS18285 ba941ac717c206fa5425da48b25a086c 246 SMART SM00382 27 222 1.7E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS18285 ba941ac717c206fa5425da48b25a086c 246 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS02190 98bf23fa5c23870ccda4ca423ac92895 764 SUPERFAMILY SSF56719 35 487 6.93E-152 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CVS42_RS02190 98bf23fa5c23870ccda4ca423ac92895 764 SMART SM00434 15 465 3.4E-223 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS02190 98bf23fa5c23870ccda4ca423ac92895 764 Gene3D G3DSA:2.120.10.90 501 752 1.3E-41 T 29-03-2018 CVS42_RS02190 98bf23fa5c23870ccda4ca423ac92895 764 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 651 695 1.6E-5 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CVS42_RS02190 98bf23fa5c23870ccda4ca423ac92895 764 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 747 0.0 T 29-03-2018 CVS42_RS02190 98bf23fa5c23870ccda4ca423ac92895 764 Gene3D G3DSA:1.10.268.10 348 487 1.5E-43 T 29-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS02190 98bf23fa5c23870ccda4ca423ac92895 764 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 33.085 T 29-03-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS02190 98bf23fa5c23870ccda4ca423ac92895 764 Gene3D G3DSA:3.90.199.10 38 287 1.2E-96 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS02190 98bf23fa5c23870ccda4ca423ac92895 764 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 472 1.7E-131 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS02190 98bf23fa5c23870ccda4ca423ac92895 764 SUPERFAMILY SSF101904 501 745 1.7E-53 T 29-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CVS42_RS14580 a4230cc85b1968da25452cdc9729ffd3 393 Gene3D G3DSA:1.10.3860.10 1 384 5.0E-57 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS14580 a4230cc85b1968da25452cdc9729ffd3 393 PRINTS PR00173 Glutamate-aspartate symporter signature 1 18 1.6E-8 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS14580 a4230cc85b1968da25452cdc9729ffd3 393 PRINTS PR00173 Glutamate-aspartate symporter signature 331 351 1.6E-8 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS14580 a4230cc85b1968da25452cdc9729ffd3 393 PRINTS PR00173 Glutamate-aspartate symporter signature 39 59 1.6E-8 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS14580 a4230cc85b1968da25452cdc9729ffd3 393 PRINTS PR00173 Glutamate-aspartate symporter signature 266 292 1.6E-8 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS14580 a4230cc85b1968da25452cdc9729ffd3 393 Pfam PF00375 Sodium:dicarboxylate symporter family 3 376 1.1E-76 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS14580 a4230cc85b1968da25452cdc9729ffd3 393 SUPERFAMILY SSF118215 3 376 1.44E-76 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 SUPERFAMILY SSF52540 567 848 2.32E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 652 670 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 222 318 1.7E-7 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 Gene3D G3DSA:1.10.8.60 362 568 3.9E-39 T 29-03-2018 CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 729 743 7.7E-29 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 696 714 7.7E-29 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 667 685 7.7E-29 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 622 640 7.7E-29 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 868 0.0 T 29-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 Gene3D G3DSA:1.10.8.60 784 879 5.7E-11 T 29-03-2018 CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 Gene3D G3DSA:3.40.50.300 176 361 4.0E-19 T 29-03-2018 CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 Pfam PF07724 AAA domain (Cdc48 subfamily) 617 778 6.1E-37 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 SMART SM00382 217 363 1.4E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 SMART SM00382 618 754 1.0E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 784 857 1.5E-9 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 Gene3D G3DSA:1.10.1780.10 12 153 1.4E-18 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 SMART SM01086 784 876 1.4E-8 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 Gene3D G3DSA:3.40.50.300 584 782 4.7E-27 T 29-03-2018 CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 SUPERFAMILY SSF52540 180 565 2.75E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS02475 ad9d2c3da4c9a3cf1c1faf20254ae790 880 SUPERFAMILY SSF81923 11 125 5.36E-12 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CVS42_RS02995 8a58203f13557cb3202441f4b68d9070 344 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 338 65.753 T 29-03-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CVS42_RS02995 8a58203f13557cb3202441f4b68d9070 344 Gene3D G3DSA:3.40.50.10800 109 199 6.2E-20 T 29-03-2018 CVS42_RS02995 8a58203f13557cb3202441f4b68d9070 344 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 19 332 3.6E-115 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CVS42_RS02995 8a58203f13557cb3202441f4b68d9070 344 Gene3D G3DSA:3.40.50.10800 200 314 2.1E-32 T 29-03-2018 CVS42_RS02995 8a58203f13557cb3202441f4b68d9070 344 Pfam PF02445 Quinolinate synthetase A protein 23 331 2.2E-104 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CVS42_RS02995 8a58203f13557cb3202441f4b68d9070 344 Gene3D G3DSA:3.40.50.10800 16 101 1.2E-18 T 29-03-2018 CVS42_RS02995 8a58203f13557cb3202441f4b68d9070 344 SUPERFAMILY SSF142754 20 332 8.63E-107 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CVS42_RS18090 d3fa42aa1f1727e9a04d3444c3d02a4e 180 Pfam PF12019 Type II transport protein GspH 46 163 1.3E-10 T 29-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 CVS42_RS18090 d3fa42aa1f1727e9a04d3444c3d02a4e 180 SUPERFAMILY SSF54523 11 152 1.65E-14 T 29-03-2018 CVS42_RS18090 d3fa42aa1f1727e9a04d3444c3d02a4e 180 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 1.4E-4 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS18090 d3fa42aa1f1727e9a04d3444c3d02a4e 180 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 30 3.6E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS18090 d3fa42aa1f1727e9a04d3444c3d02a4e 180 Gene3D G3DSA:3.30.700.10 11 178 3.2E-12 T 29-03-2018 CVS42_RS13165 fbca1a6328f6d3fa88288493b9e0835e 82 Gene3D G3DSA:1.10.10.60 29 79 8.8E-4 T 29-03-2018 CVS42_RS08550 1ab3825e59dc2b0067c18a0bb734a1dd 372 SUPERFAMILY SSF56796 6 360 7.07E-79 T 29-03-2018 CVS42_RS08550 1ab3825e59dc2b0067c18a0bb734a1dd 372 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 351 7.7E-59 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CVS42_RS08550 1ab3825e59dc2b0067c18a0bb734a1dd 372 PIRSF PIRSF000112 1 363 4.9E-86 T 29-03-2018 CVS42_RS08550 1ab3825e59dc2b0067c18a0bb734a1dd 372 Gene3D G3DSA:1.20.1090.10 163 366 3.3E-30 T 29-03-2018 CVS42_RS08550 1ab3825e59dc2b0067c18a0bb734a1dd 372 Gene3D G3DSA:3.40.50.1970 3 162 4.5E-30 T 29-03-2018 CVS42_RS13415 915d777b4d62fd2f6a0d5480c03cc9cf 255 SUPERFAMILY SSF53850 16 252 9.66E-25 T 29-03-2018 CVS42_RS13415 915d777b4d62fd2f6a0d5480c03cc9cf 255 Gene3D G3DSA:3.40.190.10 112 200 2.2E-4 T 29-03-2018 CVS42_RS13415 915d777b4d62fd2f6a0d5480c03cc9cf 255 Gene3D G3DSA:3.40.190.10 5 111 1.6E-11 T 29-03-2018 CVS42_RS13415 915d777b4d62fd2f6a0d5480c03cc9cf 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 15 252 5.5E-15 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS13415 915d777b4d62fd2f6a0d5480c03cc9cf 255 SMART SM00062 12 253 0.0085 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS12970 96418e7fd21896287993622607a5fcf7 380 Gene3D G3DSA:3.90.1150.10 245 380 3.3E-32 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS12970 96418e7fd21896287993622607a5fcf7 380 PIRSF PIRSF000390 1 379 4.9E-98 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CVS42_RS12970 96418e7fd21896287993622607a5fcf7 380 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 5 375 2.2E-156 T 29-03-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 CVS42_RS12970 96418e7fd21896287993622607a5fcf7 380 Gene3D G3DSA:3.40.640.10 19 244 5.0E-36 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS12970 96418e7fd21896287993622607a5fcf7 380 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 21 372 1.2E-84 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CVS42_RS12970 96418e7fd21896287993622607a5fcf7 380 SUPERFAMILY SSF53383 5 377 5.71E-100 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS21580 814babb98f22c6c8f70d3c0814ec7911 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 6.1E-62 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CVS42_RS21580 814babb98f22c6c8f70d3c0814ec7911 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.2E-51 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CVS42_RS21580 814babb98f22c6c8f70d3c0814ec7911 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.2E-51 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CVS42_RS21580 814babb98f22c6c8f70d3c0814ec7911 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.2E-51 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CVS42_RS21580 814babb98f22c6c8f70d3c0814ec7911 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.2E-51 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CVS42_RS21580 814babb98f22c6c8f70d3c0814ec7911 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.2E-51 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CVS42_RS21580 814babb98f22c6c8f70d3c0814ec7911 160 SUPERFAMILY SSF52374 4 157 4.56E-47 T 29-03-2018 CVS42_RS21580 814babb98f22c6c8f70d3c0814ec7911 160 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 1.0E-4 T 29-03-2018 CVS42_RS21580 814babb98f22c6c8f70d3c0814ec7911 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 64 2.7E-20 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CVS42_RS21580 814babb98f22c6c8f70d3c0814ec7911 160 Pfam PF01467 Cytidylyltransferase-like 6 134 4.9E-23 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CVS42_RS21580 814babb98f22c6c8f70d3c0814ec7911 160 Gene3D G3DSA:3.40.50.620 2 159 9.4E-38 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS21580 814babb98f22c6c8f70d3c0814ec7911 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 36.66 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CVS42_RS19135 635bff4ee39997837f18cdfea210953d 374 Pfam PF13180 PDZ domain 264 354 2.2E-14 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS19135 635bff4ee39997837f18cdfea210953d 374 Gene3D G3DSA:2.40.10.10 44 155 8.2E-32 T 29-03-2018 CVS42_RS19135 635bff4ee39997837f18cdfea210953d 374 Gene3D G3DSA:2.40.10.10 156 264 8.2E-30 T 29-03-2018 CVS42_RS19135 635bff4ee39997837f18cdfea210953d 374 SUPERFAMILY SSF50156 247 354 1.71E-22 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS19135 635bff4ee39997837f18cdfea210953d 374 Pfam PF13365 Trypsin-like peptidase domain 84 223 5.0E-30 T 29-03-2018 CVS42_RS19135 635bff4ee39997837f18cdfea210953d 374 Gene3D G3DSA:2.30.42.10 265 368 3.5E-23 T 29-03-2018 CVS42_RS19135 635bff4ee39997837f18cdfea210953d 374 SUPERFAMILY SSF50494 24 273 1.35E-59 T 29-03-2018 IPR009003 Peptidase S1, PA clan CVS42_RS19135 635bff4ee39997837f18cdfea210953d 374 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 8 358 3.3E-144 T 29-03-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 CVS42_RS19135 635bff4ee39997837f18cdfea210953d 374 SMART SM00228 264 346 2.7E-12 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS19135 635bff4ee39997837f18cdfea210953d 374 PRINTS PR00834 HtrA/DegQ protease family signature 93 105 9.8E-49 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CVS42_RS19135 635bff4ee39997837f18cdfea210953d 374 PRINTS PR00834 HtrA/DegQ protease family signature 154 178 9.8E-49 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CVS42_RS19135 635bff4ee39997837f18cdfea210953d 374 PRINTS PR00834 HtrA/DegQ protease family signature 194 211 9.8E-49 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CVS42_RS19135 635bff4ee39997837f18cdfea210953d 374 PRINTS PR00834 HtrA/DegQ protease family signature 216 233 9.8E-49 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CVS42_RS19135 635bff4ee39997837f18cdfea210953d 374 PRINTS PR00834 HtrA/DegQ protease family signature 114 134 9.8E-49 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CVS42_RS19135 635bff4ee39997837f18cdfea210953d 374 PRINTS PR00834 HtrA/DegQ protease family signature 304 316 9.8E-49 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CVS42_RS11645 c78d88ca970a789fca6e82bf2b2944f1 434 SUPERFAMILY SSF53613 36 305 1.56E-44 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS11645 c78d88ca970a789fca6e82bf2b2944f1 434 SUPERFAMILY SSF53613 338 417 1.56E-44 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS11645 c78d88ca970a789fca6e82bf2b2944f1 434 Pfam PF00294 pfkB family carbohydrate kinase 75 302 1.3E-9 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CVS42_RS11645 c78d88ca970a789fca6e82bf2b2944f1 434 Gene3D G3DSA:3.40.1190.20 32 430 1.4E-42 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS09185 a08a48d34fa8135d814a238627fd134d 259 Pfam PF02698 DUF218 domain 84 247 2.2E-24 T 29-03-2018 IPR003848 Domain of unknown function DUF218 CVS42_RS09185 a08a48d34fa8135d814a238627fd134d 259 Gene3D G3DSA:3.40.50.620 74 218 7.4E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS01310 9434f8dedd21c413e24c7816b7f6e4ad 332 SMART SM00086 91 134 1.7E-5 T 29-03-2018 IPR001610 PAC motif CVS42_RS01310 9434f8dedd21c413e24c7816b7f6e4ad 332 Gene3D G3DSA:3.30.450.20 12 161 2.2E-32 T 29-03-2018 CVS42_RS01310 9434f8dedd21c413e24c7816b7f6e4ad 332 Pfam PF08447 PAS fold 39 127 1.3E-25 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CVS42_RS01310 9434f8dedd21c413e24c7816b7f6e4ad 332 SUPERFAMILY SSF55785 21 135 1.01E-24 T 29-03-2018 IPR000014 PAS domain CVS42_RS01310 9434f8dedd21c413e24c7816b7f6e4ad 332 SUPERFAMILY SSF55073 182 332 7.61E-42 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS01310 9434f8dedd21c413e24c7816b7f6e4ad 332 SMART SM00091 16 84 3.0E-5 T 29-03-2018 IPR000014 PAS domain CVS42_RS01310 9434f8dedd21c413e24c7816b7f6e4ad 332 SMART SM00267 166 332 2.2E-41 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS01310 9434f8dedd21c413e24c7816b7f6e4ad 332 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 176 331 4.9E-42 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS01310 9434f8dedd21c413e24c7816b7f6e4ad 332 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 138 2.3E-13 T 29-03-2018 IPR000014 PAS domain CVS42_RS01310 9434f8dedd21c413e24c7816b7f6e4ad 332 Pfam PF00990 Diguanylate cyclase, GGDEF domain 177 329 9.6E-40 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS01310 9434f8dedd21c413e24c7816b7f6e4ad 332 Gene3D G3DSA:3.30.70.270 165 332 1.1E-46 T 29-03-2018 CVS42_RS06485 61e9dbf13ac610c2b5f6da486fa76c5d 576 Gene3D G3DSA:3.10.410.10 464 552 2.8E-31 T 29-03-2018 CVS42_RS06485 61e9dbf13ac610c2b5f6da486fa76c5d 576 Gene3D G3DSA:3.40.50.300 249 462 2.2E-69 T 29-03-2018 CVS42_RS06485 61e9dbf13ac610c2b5f6da486fa76c5d 576 Gene3D G3DSA:3.40.50.300 13 248 2.0E-78 T 29-03-2018 CVS42_RS06485 61e9dbf13ac610c2b5f6da486fa76c5d 576 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 340 351 - T 29-03-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CVS42_RS06485 61e9dbf13ac610c2b5f6da486fa76c5d 576 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 576 42.384 T 29-03-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CVS42_RS06485 61e9dbf13ac610c2b5f6da486fa76c5d 576 SUPERFAMILY SSF52540 4 574 3.72E-213 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS06485 61e9dbf13ac610c2b5f6da486fa76c5d 576 Pfam PF01268 Formate--tetrahydrofolate ligase 3 575 3.8E-238 T 29-03-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CVS42_RS06485 61e9dbf13ac610c2b5f6da486fa76c5d 576 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 102 112 - T 29-03-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CVS42_RS03105 e2aaf24f94fba4de8c1edc6ddf41003a 526 Gene3D G3DSA:3.40.50.2300 24 264 2.4E-15 T 29-03-2018 CVS42_RS03105 e2aaf24f94fba4de8c1edc6ddf41003a 526 SUPERFAMILY SSF52172 28 166 4.13E-14 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS03105 e2aaf24f94fba4de8c1edc6ddf41003a 526 Gene3D G3DSA:1.10.3210.10 265 522 2.8E-44 T 29-03-2018 CVS42_RS03105 e2aaf24f94fba4de8c1edc6ddf41003a 526 SUPERFAMILY SSF109604 328 518 1.2E-33 T 29-03-2018 CVS42_RS03105 e2aaf24f94fba4de8c1edc6ddf41003a 526 Pfam PF11849 Domain of unknown function (DUF3369) 155 319 1.9E-42 T 29-03-2018 IPR021800 Domain of unknown function DUF3369 CVS42_RS03105 e2aaf24f94fba4de8c1edc6ddf41003a 526 Pfam PF01966 HD domain 342 477 1.4E-17 T 29-03-2018 IPR006674 HD domain CVS42_RS03105 e2aaf24f94fba4de8c1edc6ddf41003a 526 SMART SM00471 337 487 6.3E-8 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS03105 e2aaf24f94fba4de8c1edc6ddf41003a 526 Pfam PF00072 Response regulator receiver domain 35 145 2.3E-8 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS03105 e2aaf24f94fba4de8c1edc6ddf41003a 526 SMART SM00448 33 155 0.0058 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS13105 dea6e3672673fee0409560c7cd60a8ff 539 SUPERFAMILY SSF56784 183 298 2.1E-8 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS13105 dea6e3672673fee0409560c7cd60a8ff 539 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 183 305 5.6E-13 T 29-03-2018 IPR010033 HAD-superfamily phosphatase, subfamily IIIC CVS42_RS13105 dea6e3672673fee0409560c7cd60a8ff 539 Gene3D G3DSA:3.40.630.30 370 527 9.1E-5 T 29-03-2018 CVS42_RS13105 dea6e3672673fee0409560c7cd60a8ff 539 Gene3D G3DSA:3.40.50.1000 182 304 9.6E-8 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS13105 dea6e3672673fee0409560c7cd60a8ff 539 TIGRFAM TIGR01686 FkbH: FkbH domain 180 500 2.3E-70 T 29-03-2018 IPR010037 FkbH domain CVS42_RS19305 61fb668989e442b09f4b758bf3a0dac8 325 SUPERFAMILY SSF47823 27 118 9.81E-9 T 29-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CVS42_RS19305 61fb668989e442b09f4b758bf3a0dac8 325 Pfam PF00589 Phage integrase family 132 301 3.4E-50 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS19305 61fb668989e442b09f4b758bf3a0dac8 325 Gene3D G3DSA:1.10.443.10 132 309 1.1E-43 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS19305 61fb668989e442b09f4b758bf3a0dac8 325 SUPERFAMILY SSF56349 127 313 4.71E-53 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CVS42_RS19305 61fb668989e442b09f4b758bf3a0dac8 325 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 27 110 4.9E-17 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CVS42_RS19305 61fb668989e442b09f4b758bf3a0dac8 325 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 29 317 2.6E-108 T 29-03-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 CVS42_RS19305 61fb668989e442b09f4b758bf3a0dac8 325 Gene3D G3DSA:1.10.150.130 20 131 7.3E-21 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CVS42_RS19305 61fb668989e442b09f4b758bf3a0dac8 325 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 25 315 56.003 T 29-03-2018 IPR023009 Tyrosine recombinase XerC/XerD CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 5.7E-6 T 29-03-2018 CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 5.7E-6 T 29-03-2018 CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 5.7E-6 T 29-03-2018 CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.4E-7 T 29-03-2018 CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 181 194 1.4E-7 T 29-03-2018 CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.4E-7 T 29-03-2018 CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 SUPERFAMILY SSF52317 8 241 3.48E-58 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 Gene3D G3DSA:3.30.300.10 405 529 3.6E-53 T 29-03-2018 CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 Pfam PF00117 Glutamine amidotransferase class-I 12 203 2.0E-40 T 29-03-2018 IPR017926 Glutamine amidotransferase CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00097 Anthranilate synthase component II signature 81 92 4.5E-6 T 29-03-2018 CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00097 Anthranilate synthase component II signature 181 194 4.5E-6 T 29-03-2018 CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 PRINTS PR00097 Anthranilate synthase component II signature 54 63 4.5E-6 T 29-03-2018 CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 Gene3D G3DSA:3.40.50.620 226 404 3.5E-37 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 217 529 1.4E-157 T 29-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 Pfam PF00958 GMP synthase C terminal domain 437 528 7.1E-44 T 29-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 SUPERFAMILY SSF54810 409 529 1.44E-51 T 29-03-2018 CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 Pfam PF02540 NAD synthase 227 292 6.5E-7 T 29-03-2018 IPR022310 NAD/GMP synthase CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 Gene3D G3DSA:3.40.50.880 5 225 1.1E-46 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 209 1.7E-81 T 29-03-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 529 56.81 T 29-03-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 CVS42_RS11510 8166eb2d9729a04684571e59e83f6788 529 SUPERFAMILY SSF52402 201 424 1.7E-59 T 29-03-2018 CVS42_RS07455 e97e3deafa6d8fe62ea07956620d90ab 554 SUPERFAMILY SSF56235 1 196 2.06E-56 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS07455 e97e3deafa6d8fe62ea07956620d90ab 554 Gene3D G3DSA:3.40.50.620 192 514 1.8E-88 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS07455 e97e3deafa6d8fe62ea07956620d90ab 554 PIRSF PIRSF001589 1 367 6.8E-107 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CVS42_RS07455 e97e3deafa6d8fe62ea07956620d90ab 554 PIRSF PIRSF001589 363 505 3.2E-29 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CVS42_RS07455 e97e3deafa6d8fe62ea07956620d90ab 554 Gene3D G3DSA:3.60.20.10 2 191 2.3E-48 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS07455 e97e3deafa6d8fe62ea07956620d90ab 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 2.6E-40 T 29-03-2018 IPR017932 Glutamine amidotransferase type 2 domain CVS42_RS07455 e97e3deafa6d8fe62ea07956620d90ab 554 SUPERFAMILY SSF52402 211 478 6.81E-74 T 29-03-2018 CVS42_RS07455 e97e3deafa6d8fe62ea07956620d90ab 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 374 2.3E-118 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CVS42_RS07455 e97e3deafa6d8fe62ea07956620d90ab 554 Pfam PF00733 Asparagine synthase 211 366 7.2E-58 T 29-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CVS42_RS11945 abf2e7adc8eb500fe9837db52e0eab44 650 Pfam PF00563 EAL domain 395 621 1.5E-64 T 29-03-2018 IPR001633 EAL domain CVS42_RS11945 abf2e7adc8eb500fe9837db52e0eab44 650 SUPERFAMILY SSF55073 223 378 1.37E-41 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS11945 abf2e7adc8eb500fe9837db52e0eab44 650 Gene3D G3DSA:3.20.20.450 384 630 8.5E-87 T 29-03-2018 IPR001633 EAL domain CVS42_RS11945 abf2e7adc8eb500fe9837db52e0eab44 650 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 216 372 6.4E-35 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS11945 abf2e7adc8eb500fe9837db52e0eab44 650 SMART SM00052 386 626 2.9E-90 T 29-03-2018 IPR001633 EAL domain CVS42_RS11945 abf2e7adc8eb500fe9837db52e0eab44 650 Pfam PF00990 Diguanylate cyclase, GGDEF domain 218 370 6.1E-40 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS11945 abf2e7adc8eb500fe9837db52e0eab44 650 SMART SM00267 205 376 6.3E-51 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS11945 abf2e7adc8eb500fe9837db52e0eab44 650 Gene3D G3DSA:3.30.70.270 214 383 2.2E-54 T 29-03-2018 CVS42_RS11945 abf2e7adc8eb500fe9837db52e0eab44 650 Gene3D G3DSA:3.30.450.20 1 98 2.4E-5 T 29-03-2018 CVS42_RS11945 abf2e7adc8eb500fe9837db52e0eab44 650 Gene3D G3DSA:3.30.450.20 99 213 4.6E-5 T 29-03-2018 CVS42_RS11945 abf2e7adc8eb500fe9837db52e0eab44 650 SUPERFAMILY SSF141868 393 628 9.29E-76 T 29-03-2018 IPR001633 EAL domain CVS42_RS15005 c21d7c7e8d3159c771a18f6cc87c2cb9 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 4.0E-141 T 29-03-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CVS42_RS15005 c21d7c7e8d3159c771a18f6cc87c2cb9 322 SUPERFAMILY SSF53686 4 308 2.88E-94 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CVS42_RS15005 c21d7c7e8d3159c771a18f6cc87c2cb9 322 Gene3D G3DSA:3.40.50.1100 134 322 3.2E-58 T 29-03-2018 CVS42_RS15005 c21d7c7e8d3159c771a18f6cc87c2cb9 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 29-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CVS42_RS15005 c21d7c7e8d3159c771a18f6cc87c2cb9 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 311 5.3E-134 T 29-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CVS42_RS15005 c21d7c7e8d3159c771a18f6cc87c2cb9 322 Gene3D G3DSA:3.40.50.1100 20 133 6.9E-32 T 29-03-2018 CVS42_RS15005 c21d7c7e8d3159c771a18f6cc87c2cb9 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 2.0E-68 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CVS42_RS15690 5545feb36181adb84edfc519da861344 494 Pfam PF03734 L,D-transpeptidase catalytic domain 265 432 8.1E-31 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CVS42_RS15690 5545feb36181adb84edfc519da861344 494 Gene3D G3DSA:1.10.101.10 170 240 3.5E-19 T 29-03-2018 IPR002477 Peptidoglycan binding-like CVS42_RS15690 5545feb36181adb84edfc519da861344 494 SUPERFAMILY SSF141523 263 318 3.66E-21 T 29-03-2018 CVS42_RS15690 5545feb36181adb84edfc519da861344 494 SUPERFAMILY SSF141523 372 423 3.66E-21 T 29-03-2018 CVS42_RS15690 5545feb36181adb84edfc519da861344 494 Pfam PF01471 Putative peptidoglycan binding domain 182 237 3.3E-12 T 29-03-2018 IPR002477 Peptidoglycan binding-like CVS42_RS15690 5545feb36181adb84edfc519da861344 494 SUPERFAMILY SSF47090 168 243 2.75E-16 T 29-03-2018 IPR002477 Peptidoglycan binding-like CVS42_RS15690 5545feb36181adb84edfc519da861344 494 Gene3D G3DSA:2.40.440.10 264 436 5.8E-24 T 29-03-2018 CVS42_RS03100 632e3e28df36bb5376f9e7fec3ed18e0 176 SUPERFAMILY SSF50324 6 174 3.27E-65 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CVS42_RS03100 632e3e28df36bb5376f9e7fec3ed18e0 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.8E-53 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CVS42_RS03100 632e3e28df36bb5376f9e7fec3ed18e0 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CVS42_RS03100 632e3e28df36bb5376f9e7fec3ed18e0 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.407 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CVS42_RS03100 632e3e28df36bb5376f9e7fec3ed18e0 176 Gene3D G3DSA:3.90.80.10 3 176 1.0E-51 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CVS42_RS01930 a604164aa78778b82d74f543c5aa9964 654 Pfam PF00884 Sulfatase 285 555 1.4E-42 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CVS42_RS01930 a604164aa78778b82d74f543c5aa9964 654 Gene3D G3DSA:3.40.720.10 274 560 4.2E-51 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CVS42_RS01930 a604164aa78778b82d74f543c5aa9964 654 SUPERFAMILY SSF53649 283 621 1.96E-67 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CVS42_RS01930 a604164aa78778b82d74f543c5aa9964 654 PIRSF PIRSF005091 14 647 7.3E-98 T 29-03-2018 IPR012160 Lipoteichoic acid synthase-like CVS42_RS07725 173a3cc12e8fbe1aa97c0b8a3163b929 440 Pfam PF13726 Na+-H+ antiporter family 2 88 2.9E-34 T 29-03-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal CVS42_RS07725 173a3cc12e8fbe1aa97c0b8a3163b929 440 Pfam PF03553 Na+/H+ antiporter family 150 434 8.0E-72 T 29-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CVS42_RS10790 747332b2c1e9f73ac331314e89fe100e 211 Pfam PF02397 Bacterial sugar transferase 13 206 1.5E-56 T 29-03-2018 IPR003362 Bacterial sugar transferase CVS42_RS19530 3da16029f5253a3224c31b16c77cb4e6 405 Gene3D G3DSA:2.160.10.10 308 405 2.9E-18 T 29-03-2018 CVS42_RS19530 3da16029f5253a3224c31b16c77cb4e6 405 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 334 361 0.0017 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS19530 3da16029f5253a3224c31b16c77cb4e6 405 SUPERFAMILY SSF53448 5 275 3.52E-70 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS19530 3da16029f5253a3224c31b16c77cb4e6 405 SUPERFAMILY SSF53448 341 357 3.52E-70 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS19530 3da16029f5253a3224c31b16c77cb4e6 405 SUPERFAMILY SSF51161 292 403 2.36E-21 T 29-03-2018 IPR011004 Trimeric LpxA-like CVS42_RS19530 3da16029f5253a3224c31b16c77cb4e6 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.004 T 29-03-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CVS42_RS19530 3da16029f5253a3224c31b16c77cb4e6 405 Gene3D G3DSA:3.90.550.10 5 307 3.8E-59 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS19530 3da16029f5253a3224c31b16c77cb4e6 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CVS42_RS19530 3da16029f5253a3224c31b16c77cb4e6 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CVS42_RS19530 3da16029f5253a3224c31b16c77cb4e6 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 377 4.1E-149 T 29-03-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CVS42_RS19530 3da16029f5253a3224c31b16c77cb4e6 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CVS42_RS19530 3da16029f5253a3224c31b16c77cb4e6 405 Pfam PF00483 Nucleotidyl transferase 6 271 1.6E-62 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CVS42_RS11695 b96e616e73682f8311a63eedd21594ab 838 SMART SM00843 770 835 7.7E-42 T 29-03-2018 IPR018541 FtsK gamma domain CVS42_RS11695 b96e616e73682f8311a63eedd21594ab 838 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 15 185 4.2E-39 T 29-03-2018 IPR025199 DNA translocase FtsK, 4TM region CVS42_RS11695 b96e616e73682f8311a63eedd21594ab 838 Pfam PF01580 FtsK/SpoIIIE family 453 666 3.1E-69 T 29-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CVS42_RS11695 b96e616e73682f8311a63eedd21594ab 838 SUPERFAMILY SSF46785 770 834 9.52E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS11695 b96e616e73682f8311a63eedd21594ab 838 Gene3D G3DSA:1.10.10.10 772 826 1.3E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS11695 b96e616e73682f8311a63eedd21594ab 838 SUPERFAMILY SSF52540 427 737 8.1E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11695 b96e616e73682f8311a63eedd21594ab 838 Pfam PF09397 Ftsk gamma domain 772 832 1.4E-27 T 29-03-2018 IPR018541 FtsK gamma domain CVS42_RS11695 b96e616e73682f8311a63eedd21594ab 838 Gene3D G3DSA:3.40.50.300 357 706 4.6E-52 T 29-03-2018 CVS42_RS19225 7b5004e83223d85d4755bdd8f10b6654 184 PIRSF PIRSF006118 9 183 5.0E-67 T 29-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CVS42_RS19225 7b5004e83223d85d4755bdd8f10b6654 184 Pfam PF08282 haloacid dehalogenase-like hydrolase 99 154 1.2E-7 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS19225 7b5004e83223d85d4755bdd8f10b6654 184 Gene3D G3DSA:3.40.50.1000 16 183 6.3E-27 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS19225 7b5004e83223d85d4755bdd8f10b6654 184 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 22 174 4.6E-55 T 29-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CVS42_RS19225 7b5004e83223d85d4755bdd8f10b6654 184 SUPERFAMILY SSF56784 18 175 5.65E-42 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS15760 3649f059acb897ade384f0bd8d600eb7 452 SMART SM00977 365 437 6.0E-24 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CVS42_RS15760 3649f059acb897ade384f0bd8d600eb7 452 SUPERFAMILY SSF52402 20 233 1.72E-58 T 29-03-2018 CVS42_RS15760 3649f059acb897ade384f0bd8d600eb7 452 SUPERFAMILY SSF56037 324 438 7.85E-29 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CVS42_RS15760 3649f059acb897ade384f0bd8d600eb7 452 Pfam PF11734 TilS substrate C-terminal domain 365 437 2.0E-23 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CVS42_RS15760 3649f059acb897ade384f0bd8d600eb7 452 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 366 412 1.6E-12 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CVS42_RS15760 3649f059acb897ade384f0bd8d600eb7 452 Pfam PF01171 PP-loop family 22 199 7.7E-56 T 29-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CVS42_RS15760 3649f059acb897ade384f0bd8d600eb7 452 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 22 203 1.6E-50 T 29-03-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CVS42_RS15760 3649f059acb897ade384f0bd8d600eb7 452 SUPERFAMILY SSF82829 233 318 3.14E-27 T 29-03-2018 CVS42_RS15760 3649f059acb897ade384f0bd8d600eb7 452 Gene3D G3DSA:3.40.50.620 18 227 1.3E-37 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS15760 3649f059acb897ade384f0bd8d600eb7 452 Pfam PF09179 TilS substrate binding domain 247 314 3.8E-22 T 29-03-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CVS42_RS15760 3649f059acb897ade384f0bd8d600eb7 452 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 6 306 23.112 T 29-03-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CVS42_RS02605 a3f978d6d9912f7011f82235f170615b 407 Gene3D G3DSA:3.40.50.300 220 407 2.1E-45 T 29-03-2018 CVS42_RS02605 a3f978d6d9912f7011f82235f170615b 407 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CVS42_RS02605 a3f978d6d9912f7011f82235f170615b 407 SUPERFAMILY SSF52540 75 363 7.78E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS02605 a3f978d6d9912f7011f82235f170615b 407 SMART SM00490 261 342 2.8E-33 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS02605 a3f978d6d9912f7011f82235f170615b 407 SMART SM00487 22 224 3.7E-54 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS02605 a3f978d6d9912f7011f82235f170615b 407 Pfam PF00271 Helicase conserved C-terminal domain 234 342 1.0E-31 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS02605 a3f978d6d9912f7011f82235f170615b 407 Gene3D G3DSA:3.40.50.300 6 219 6.3E-56 T 29-03-2018 CVS42_RS02605 a3f978d6d9912f7011f82235f170615b 407 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 407 50.543 T 29-03-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 CVS42_RS02605 a3f978d6d9912f7011f82235f170615b 407 Pfam PF00270 DEAD/DEAH box helicase 27 196 1.0E-44 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CVS42_RS01565 aedd88fa53d00c01a845c61bbd520c8a 153 Gene3D G3DSA:1.10.530.10 3 153 9.5E-49 T 29-03-2018 CVS42_RS01565 aedd88fa53d00c01a845c61bbd520c8a 153 SUPERFAMILY SSF53955 7 150 6.19E-44 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS01565 aedd88fa53d00c01a845c61bbd520c8a 153 Hamap MF_04109 Endolysin. 1 153 37.988 T 29-03-2018 IPR034691 Endolysin lambda type GO:0003796|GO:0009253|GO:0019076|GO:0044659 CVS42_RS01565 aedd88fa53d00c01a845c61bbd520c8a 153 Pfam PF00959 Phage lysozyme 41 139 1.1E-11 T 29-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 401 554 4.1E-31 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 Pfam PF11987 Translation-initiation factor 2 682 787 6.5E-36 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 895 17.639 T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 Gene3D G3DSA:3.40.50.300 392 560 1.8E-40 T 29-03-2018 CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 ProSitePatterns PS01176 Initiation factor 2 signature. 848 870 - T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 322 372 1.7E-14 T 29-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 Gene3D G3DSA:2.40.30.10 798 896 4.6E-31 T 29-03-2018 CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 SUPERFAMILY SSF50447 798 895 1.37E-34 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 SUPERFAMILY SSF46955 3 51 6.96E-12 T 29-03-2018 IPR009061 Putative DNA-binding domain CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 314 897 1.1E-286 T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 Pfam PF00009 Elongation factor Tu GTP binding domain 401 557 4.1E-35 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 SUPERFAMILY SSF52156 675 804 6.54E-37 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 SUPERFAMILY SSF50447 570 652 1.13E-23 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 Gene3D G3DSA:2.40.30.10 561 673 4.0E-12 T 29-03-2018 CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 1.6E-12 T 29-03-2018 IPR013575 Initiation factor 2 associated domain, bacterial CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 Gene3D G3DSA:3.30.56.50 324 365 6.8E-10 T 29-03-2018 CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 Gene3D G3DSA:3.30.56.50 4 46 7.0E-8 T 29-03-2018 CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 Gene3D G3DSA:3.40.50.10050 695 776 4.3E-25 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CVS42_RS16615 c6c2aa3d1b2577c78faefa46526e23c5 897 SUPERFAMILY SSF52540 394 563 6.58E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS08475 7c48f3a5c4d72efdf68ed80c2602b081 760 Gene3D G3DSA:3.20.70.20 2 760 4.0E-291 T 29-03-2018 CVS42_RS08475 7c48f3a5c4d72efdf68ed80c2602b081 760 Pfam PF01228 Glycine radical 630 741 1.3E-42 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CVS42_RS08475 7c48f3a5c4d72efdf68ed80c2602b081 760 Pfam PF02901 Pyruvate formate lyase-like 26 614 2.3E-201 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CVS42_RS08475 7c48f3a5c4d72efdf68ed80c2602b081 760 PIRSF PIRSF000379 8 760 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CVS42_RS08475 7c48f3a5c4d72efdf68ed80c2602b081 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 760 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CVS42_RS08475 7c48f3a5c4d72efdf68ed80c2602b081 760 SUPERFAMILY SSF51998 4 758 2.75E-288 T 29-03-2018 CVS42_RS08475 7c48f3a5c4d72efdf68ed80c2602b081 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CVS42_RS10960 173c67852855c167ec8e00a77ccebf7d 328 Pfam PF00589 Phage integrase family 163 307 1.2E-20 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS10960 173c67852855c167ec8e00a77ccebf7d 328 SUPERFAMILY SSF56349 59 315 1.29E-43 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CVS42_RS10960 173c67852855c167ec8e00a77ccebf7d 328 Gene3D G3DSA:1.10.443.10 165 325 5.0E-32 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS10960 173c67852855c167ec8e00a77ccebf7d 328 Gene3D G3DSA:1.10.150.130 54 164 1.4E-9 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CVS42_RS06420 49aa25c7371ff593a138478aa7d7aab6 81 SUPERFAMILY SSF54285 1 81 4.25E-25 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CVS42_RS06420 49aa25c7371ff593a138478aa7d7aab6 81 Gene3D G3DSA:3.10.20.30 1 81 2.1E-22 T 29-03-2018 IPR012675 Beta-grasp domain CVS42_RS06420 49aa25c7371ff593a138478aa7d7aab6 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 4.1E-23 T 29-03-2018 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 CVS42_RS06420 49aa25c7371ff593a138478aa7d7aab6 81 Pfam PF02597 ThiS family 4 81 3.7E-22 T 29-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CVS42_RS04605 79045d51d56ebb4a997952526ebc69fe 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 4.1E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS04605 79045d51d56ebb4a997952526ebc69fe 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.1E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS04605 79045d51d56ebb4a997952526ebc69fe 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.1E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS04605 79045d51d56ebb4a997952526ebc69fe 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 4.1E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS04605 79045d51d56ebb4a997952526ebc69fe 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 4.1E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS04605 79045d51d56ebb4a997952526ebc69fe 289 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 181 0.0099 T 29-03-2018 CVS42_RS04605 79045d51d56ebb4a997952526ebc69fe 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.5E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS04605 79045d51d56ebb4a997952526ebc69fe 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 5.5E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS04605 79045d51d56ebb4a997952526ebc69fe 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 5.5E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS04605 79045d51d56ebb4a997952526ebc69fe 289 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CVS42_RS04605 79045d51d56ebb4a997952526ebc69fe 289 Pfam PF00106 short chain dehydrogenase 6 191 1.7E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS04605 79045d51d56ebb4a997952526ebc69fe 289 Gene3D G3DSA:3.40.50.720 1 260 1.5E-53 T 29-03-2018 CVS42_RS04605 79045d51d56ebb4a997952526ebc69fe 289 SUPERFAMILY SSF51735 1 259 5.07E-59 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS05005 d1374e7510e552ee0792a4913fb3d0fc 127 Gene3D G3DSA:1.20.210.10 1 125 5.7E-4 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CVS42_RS05005 d1374e7510e552ee0792a4913fb3d0fc 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 3 122 4.7E-26 T 29-03-2018 IPR007360 Invasion gene expression up-regulator, SirB CVS42_RS16555 3b5e6d1507c715f4ba47a155447f19c1 108 Pfam PF13466 STAS domain 16 91 5.5E-15 T 29-03-2018 IPR002645 STAS domain CVS42_RS16555 3b5e6d1507c715f4ba47a155447f19c1 108 Gene3D G3DSA:3.30.750.24 1 103 2.8E-11 T 29-03-2018 IPR002645 STAS domain CVS42_RS16555 3b5e6d1507c715f4ba47a155447f19c1 108 SUPERFAMILY SSF52091 1 96 4.91E-19 T 29-03-2018 IPR002645 STAS domain CVS42_RS07695 afaf42160d3509162aad6a8a2ffeb3f7 394 SUPERFAMILY SSF50998 34 390 6.54E-78 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CVS42_RS07695 afaf42160d3509162aad6a8a2ffeb3f7 394 Pfam PF13360 PQQ-like domain 329 391 2.7E-5 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CVS42_RS07695 afaf42160d3509162aad6a8a2ffeb3f7 394 Pfam PF13360 PQQ-like domain 79 319 1.6E-52 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CVS42_RS07695 afaf42160d3509162aad6a8a2ffeb3f7 394 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 391 1.0E-131 T 29-03-2018 IPR017687 Outer membrane protein assembly factor BamB CVS42_RS07695 afaf42160d3509162aad6a8a2ffeb3f7 394 Gene3D G3DSA:2.140.10.10 363 393 0.042 T 29-03-2018 CVS42_RS07695 afaf42160d3509162aad6a8a2ffeb3f7 394 Gene3D G3DSA:2.140.10.10 27 112 2.5E-8 T 29-03-2018 CVS42_RS07695 afaf42160d3509162aad6a8a2ffeb3f7 394 Gene3D G3DSA:2.140.10.10 113 234 1.5E-22 T 29-03-2018 CVS42_RS07695 afaf42160d3509162aad6a8a2ffeb3f7 394 SMART SM00564 290 321 18.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CVS42_RS07695 afaf42160d3509162aad6a8a2ffeb3f7 394 SMART SM00564 116 147 2.7E-5 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CVS42_RS07695 afaf42160d3509162aad6a8a2ffeb3f7 394 SMART SM00564 155 187 0.0037 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CVS42_RS07695 afaf42160d3509162aad6a8a2ffeb3f7 394 SMART SM00564 66 97 1.2E-4 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CVS42_RS07695 afaf42160d3509162aad6a8a2ffeb3f7 394 SMART SM00564 252 283 15.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CVS42_RS07695 afaf42160d3509162aad6a8a2ffeb3f7 394 SMART SM00564 331 362 0.085 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CVS42_RS07695 afaf42160d3509162aad6a8a2ffeb3f7 394 Gene3D G3DSA:2.140.10.10 235 362 3.4E-19 T 29-03-2018 CVS42_RS07695 afaf42160d3509162aad6a8a2ffeb3f7 394 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 393 38.048 T 29-03-2018 IPR017687 Outer membrane protein assembly factor BamB CVS42_RS08600 7adbcc8f5b15710e6fb1e2ec688e44fc 238 Gene3D G3DSA:1.10.1060.10 107 237 2.0E-30 T 29-03-2018 CVS42_RS08600 7adbcc8f5b15710e6fb1e2ec688e44fc 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 3.5E-10 T 29-03-2018 CVS42_RS08600 7adbcc8f5b15710e6fb1e2ec688e44fc 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS08600 7adbcc8f5b15710e6fb1e2ec688e44fc 238 Gene3D G3DSA:3.10.20.30 1 106 2.0E-31 T 29-03-2018 IPR012675 Beta-grasp domain CVS42_RS08600 7adbcc8f5b15710e6fb1e2ec688e44fc 238 SUPERFAMILY SSF54292 1 106 5.97E-30 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CVS42_RS08600 7adbcc8f5b15710e6fb1e2ec688e44fc 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 1.3E-85 T 29-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS08600 7adbcc8f5b15710e6fb1e2ec688e44fc 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 111 3.1E-30 T 29-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS08600 7adbcc8f5b15710e6fb1e2ec688e44fc 238 SUPERFAMILY SSF46548 107 234 3.66E-40 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CVS42_RS12545 1ba332664968868b07383c5f00b5050d 335 SUPERFAMILY SSF56784 55 286 1.48E-18 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS12545 1ba332664968868b07383c5f00b5050d 335 Gene3D G3DSA:3.40.50.1000 56 327 1.9E-16 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS12545 1ba332664968868b07383c5f00b5050d 335 Pfam PF12710 haloacid dehalogenase-like hydrolase 61 265 2.0E-19 T 29-03-2018 CVS42_RS15045 d16282c5ed65b495497ef812d85491d0 679 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 543 576 - T 29-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 CVS42_RS15045 d16282c5ed65b495497ef812d85491d0 679 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 31 604 7.4E-173 T 29-03-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 CVS42_RS15045 d16282c5ed65b495497ef812d85491d0 679 Pfam PF00263 Bacterial type II and III secretion system protein 432 598 4.1E-55 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 CVS42_RS15045 d16282c5ed65b495497ef812d85491d0 679 PRINTS PR00811 Bacterial general secretion pathway protein D signature 350 360 3.3E-41 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS15045 d16282c5ed65b495497ef812d85491d0 679 PRINTS PR00811 Bacterial general secretion pathway protein D signature 428 452 3.3E-41 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS15045 d16282c5ed65b495497ef812d85491d0 679 PRINTS PR00811 Bacterial general secretion pathway protein D signature 585 599 3.3E-41 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS15045 d16282c5ed65b495497ef812d85491d0 679 PRINTS PR00811 Bacterial general secretion pathway protein D signature 463 473 3.3E-41 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS15045 d16282c5ed65b495497ef812d85491d0 679 PRINTS PR00811 Bacterial general secretion pathway protein D signature 562 580 3.3E-41 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS15045 d16282c5ed65b495497ef812d85491d0 679 Pfam PF03958 Bacterial type II/III secretion system short domain 127 190 4.8E-12 T 29-03-2018 IPR005644 NolW-like CVS42_RS15045 d16282c5ed65b495497ef812d85491d0 679 Pfam PF03958 Bacterial type II/III secretion system short domain 193 261 2.0E-13 T 29-03-2018 IPR005644 NolW-like CVS42_RS15045 d16282c5ed65b495497ef812d85491d0 679 Pfam PF03958 Bacterial type II/III secretion system short domain 269 350 1.0E-19 T 29-03-2018 IPR005644 NolW-like CVS42_RS17270 82d2dd44563ee0532e3e7f8a3c9eb471 305 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 4 290 5.1E-112 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CVS42_RS17270 82d2dd44563ee0532e3e7f8a3c9eb471 305 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 4 300 30.113 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CVS42_RS17270 82d2dd44563ee0532e3e7f8a3c9eb471 305 Pfam PF01715 IPP transferase 38 283 1.7E-84 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CVS42_RS17270 82d2dd44563ee0532e3e7f8a3c9eb471 305 SUPERFAMILY SSF52540 5 147 8.4E-20 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS17270 82d2dd44563ee0532e3e7f8a3c9eb471 305 Gene3D G3DSA:1.10.287.890 199 281 2.1E-25 T 29-03-2018 CVS42_RS17270 82d2dd44563ee0532e3e7f8a3c9eb471 305 Gene3D G3DSA:3.40.50.300 2 193 3.6E-60 T 29-03-2018 CVS42_RS08470 598e6e76b254329079bebb0d9c1aa065 282 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 29-03-2018 IPR024002 Formate/nitrite transporter, conserved site CVS42_RS08470 598e6e76b254329079bebb0d9c1aa065 282 Pfam PF01226 Formate/nitrite transporter 19 276 6.4E-76 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CVS42_RS08470 598e6e76b254329079bebb0d9c1aa065 282 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 278 2.8E-86 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CVS42_RS08470 598e6e76b254329079bebb0d9c1aa065 282 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 15 279 9.0E-127 T 29-03-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 CVS42_RS08470 598e6e76b254329079bebb0d9c1aa065 282 Gene3D G3DSA:1.20.1080.10 10 282 3.9E-80 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CVS42_RS08470 598e6e76b254329079bebb0d9c1aa065 282 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 29-03-2018 IPR024002 Formate/nitrite transporter, conserved site CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 SMART SM01231 352 412 1.0E-16 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 Pfam PF01584 CheW-like domain 606 733 5.9E-24 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 460 599 4.4E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 Gene3D G3DSA:2.40.50.180 631 684 4.0E-10 T 29-03-2018 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 Gene3D G3DSA:1.20.120.160 2 160 2.1E-32 T 29-03-2018 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 SUPERFAMILY SSF55874 415 598 2.62E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 SUPERFAMILY SSF50341 599 732 3.01E-30 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 SMART SM00260 592 732 1.7E-35 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 353 412 3.1E-12 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 Gene3D G3DSA:1.10.238.10 213 273 0.021 T 29-03-2018 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 SUPERFAMILY SSF47384 353 413 1.73E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 SMART SM00073 6 103 2.3E-20 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 SMART SM00387 457 600 4.1E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 597 1.6E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 516 1.6E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 554 1.6E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 578 1.6E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 SUPERFAMILY SSF47226 6 128 6.41E-33 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 Pfam PF01627 Hpt domain 8 99 3.7E-18 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 Gene3D G3DSA:1.10.287.560 352 413 2.9E-16 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 Gene3D G3DSA:2.30.30.40 685 732 4.1E-20 T 29-03-2018 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 Gene3D G3DSA:2.30.30.40 600 630 4.3E-4 T 29-03-2018 CVS42_RS05560 56a5f82a629f8d9c5df3d51b96b7f48b 739 Gene3D G3DSA:3.30.565.10 415 599 2.0E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 262 386 7.8E-15 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 SMART SM00091 132 199 1.6 T 29-03-2018 IPR000014 PAS domain CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 SMART SM00091 8 80 0.14 T 29-03-2018 IPR000014 PAS domain CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 125 4.2E-8 T 29-03-2018 IPR000014 PAS domain CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 SMART SM00052 402 647 2.5E-103 T 29-03-2018 IPR001633 EAL domain CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 Gene3D G3DSA:3.30.450.20 120 244 2.5E-15 T 29-03-2018 CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 Pfam PF00990 Diguanylate cyclase, GGDEF domain 243 387 9.7E-23 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 Pfam PF13188 PAS domain 136 177 9.2E-5 T 29-03-2018 IPR000014 PAS domain CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 Gene3D G3DSA:3.30.70.270 245 398 2.5E-31 T 29-03-2018 CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 SUPERFAMILY SSF55073 247 390 4.63E-23 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 SUPERFAMILY SSF141868 409 650 1.44E-85 T 29-03-2018 IPR001633 EAL domain CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 Pfam PF08448 PAS fold 15 121 4.8E-15 T 29-03-2018 IPR013656 PAS fold-4 CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 SMART SM00267 231 391 5.4E-17 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 Gene3D G3DSA:3.20.20.450 399 651 1.5E-95 T 29-03-2018 IPR001633 EAL domain CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 Pfam PF00563 EAL domain 408 642 9.7E-72 T 29-03-2018 IPR001633 EAL domain CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 Gene3D G3DSA:3.30.450.20 6 119 1.5E-16 T 29-03-2018 CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 SUPERFAMILY SSF55785 10 113 1.59E-13 T 29-03-2018 IPR000014 PAS domain CVS42_RS03855 7e6629c5182d7dc31ea576f462df79bc 654 SUPERFAMILY SSF55785 117 229 2.62E-15 T 29-03-2018 IPR000014 PAS domain CVS42_RS13325 7e1bcaaab0d25b8b95645d941a02dccc 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 1.1E-40 T 29-03-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 CVS42_RS13325 7e1bcaaab0d25b8b95645d941a02dccc 375 Gene3D G3DSA:1.20.59.10 3 83 2.2E-24 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CVS42_RS13325 7e1bcaaab0d25b8b95645d941a02dccc 375 Pfam PF01817 Chorismate mutase type II 9 87 1.1E-20 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CVS42_RS13325 7e1bcaaab0d25b8b95645d941a02dccc 375 SUPERFAMILY SSF48600 4 89 3.66E-23 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CVS42_RS13325 7e1bcaaab0d25b8b95645d941a02dccc 375 Pfam PF02153 Prephenate dehydrogenase 141 344 5.1E-27 T 29-03-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CVS42_RS13325 7e1bcaaab0d25b8b95645d941a02dccc 375 Gene3D G3DSA:3.40.50.720 84 247 1.0E-22 T 29-03-2018 CVS42_RS13325 7e1bcaaab0d25b8b95645d941a02dccc 375 SUPERFAMILY SSF51735 91 237 3.39E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS13325 7e1bcaaab0d25b8b95645d941a02dccc 375 SMART SM00830 9 89 8.0E-31 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CVS42_RS13325 7e1bcaaab0d25b8b95645d941a02dccc 375 Gene3D G3DSA:1.10.3660.10 249 372 2.1E-31 T 29-03-2018 CVS42_RS13325 7e1bcaaab0d25b8b95645d941a02dccc 375 PIRSF PIRSF001499 1 374 8.1E-164 T 29-03-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 CVS42_RS13325 7e1bcaaab0d25b8b95645d941a02dccc 375 SUPERFAMILY SSF48179 242 365 2.83E-40 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CVS42_RS16140 da2cf25d9f68722af66aaba458300fa9 261 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 259 6.4E-112 T 29-03-2018 IPR016908 Uncharacterised conserved protein UCP029037 CVS42_RS16140 da2cf25d9f68722af66aaba458300fa9 261 PIRSF PIRSF029037 1 261 1.1E-104 T 29-03-2018 IPR016908 Uncharacterised conserved protein UCP029037 CVS42_RS14850 3f6c98301fccfa310314eff96d403903 182 Pfam PF01292 Prokaryotic cytochrome b561 8 178 7.5E-20 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CVS42_RS14850 3f6c98301fccfa310314eff96d403903 182 SUPERFAMILY SSF81342 3 178 1.18E-34 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CVS42_RS14850 3f6c98301fccfa310314eff96d403903 182 Gene3D G3DSA:1.20.950.20 2 182 4.9E-28 T 29-03-2018 CVS42_RS05095 2b0adcb1dbe81e0121b5f1a484e94ff5 407 Pfam PF07690 Major Facilitator Superfamily 16 349 2.7E-32 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS05095 2b0adcb1dbe81e0121b5f1a484e94ff5 407 SUPERFAMILY SSF103473 12 400 3.66E-47 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS05095 2b0adcb1dbe81e0121b5f1a484e94ff5 407 Gene3D G3DSA:1.20.1250.20 204 406 2.2E-20 T 29-03-2018 CVS42_RS05095 2b0adcb1dbe81e0121b5f1a484e94ff5 407 Gene3D G3DSA:1.20.1250.20 1 193 1.2E-23 T 29-03-2018 CVS42_RS05095 2b0adcb1dbe81e0121b5f1a484e94ff5 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CVS42_RS14860 ccbfc371720ff0155c2f8a38c8fd91b8 235 SMART SM00448 12 123 6.4E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS14860 ccbfc371720ff0155c2f8a38c8fd91b8 235 Gene3D G3DSA:1.10.10.10 127 234 4.5E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS14860 ccbfc371720ff0155c2f8a38c8fd91b8 235 Gene3D G3DSA:3.40.50.2300 5 126 5.7E-34 T 29-03-2018 CVS42_RS14860 ccbfc371720ff0155c2f8a38c8fd91b8 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 230 1.8E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS14860 ccbfc371720ff0155c2f8a38c8fd91b8 235 SUPERFAMILY SSF46894 134 231 6.24E-25 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS14860 ccbfc371720ff0155c2f8a38c8fd91b8 235 Pfam PF00072 Response regulator receiver domain 14 123 4.9E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS14860 ccbfc371720ff0155c2f8a38c8fd91b8 235 SMART SM00862 156 230 4.4E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS14860 ccbfc371720ff0155c2f8a38c8fd91b8 235 SUPERFAMILY SSF52172 10 140 3.27E-37 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS20980 50fc5b9cb7471ed6c09602bb643f6e22 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 44.525 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CVS42_RS20980 50fc5b9cb7471ed6c09602bb643f6e22 406 Gene3D G3DSA:3.75.10.10 3 404 2.0E-96 T 29-03-2018 CVS42_RS20980 50fc5b9cb7471ed6c09602bb643f6e22 406 Pfam PF02274 Amidinotransferase 18 403 2.6E-109 T 29-03-2018 CVS42_RS20980 50fc5b9cb7471ed6c09602bb643f6e22 406 TIGRFAM TIGR01078 arcA: arginine deiminase 5 406 6.3E-162 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CVS42_RS20980 50fc5b9cb7471ed6c09602bb643f6e22 406 SUPERFAMILY SSF55909 3 405 2.16E-128 T 29-03-2018 CVS42_RS20980 50fc5b9cb7471ed6c09602bb643f6e22 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 3.4E-45 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CVS42_RS20980 50fc5b9cb7471ed6c09602bb643f6e22 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 3.4E-45 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CVS42_RS20980 50fc5b9cb7471ed6c09602bb643f6e22 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 3.4E-45 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CVS42_RS20980 50fc5b9cb7471ed6c09602bb643f6e22 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 3.4E-45 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CVS42_RS20980 50fc5b9cb7471ed6c09602bb643f6e22 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 3.4E-45 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CVS42_RS20980 50fc5b9cb7471ed6c09602bb643f6e22 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 3.4E-45 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CVS42_RS20980 50fc5b9cb7471ed6c09602bb643f6e22 406 PIRSF PIRSF006356 1 406 5.8E-152 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CVS42_RS00970 8f388c6cb3d388ee82ee849735a6c928 230 SUPERFAMILY SSF51182 5 78 2.19E-9 T 29-03-2018 IPR011051 RmlC-like cupin domain CVS42_RS00970 8f388c6cb3d388ee82ee849735a6c928 230 SUPERFAMILY SSF46689 133 184 2.11E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS00970 8f388c6cb3d388ee82ee849735a6c928 230 Gene3D G3DSA:2.60.120.10 1 69 1.1E-8 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS00970 8f388c6cb3d388ee82ee849735a6c928 230 Pfam PF12833 Helix-turn-helix domain 158 223 5.0E-13 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS00970 8f388c6cb3d388ee82ee849735a6c928 230 Gene3D G3DSA:1.10.10.60 196 225 9.6E-4 T 29-03-2018 CVS42_RS00970 8f388c6cb3d388ee82ee849735a6c928 230 Gene3D G3DSA:1.10.10.60 70 195 4.2E-10 T 29-03-2018 CVS42_RS00970 8f388c6cb3d388ee82ee849735a6c928 230 SMART SM00342 150 230 2.8E-4 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS03640 efc4a4e3c38fd9bed64f5911ebd7d64a 957 Gene3D G3DSA:1.20.120.330 298 453 1.9E-46 T 29-03-2018 CVS42_RS03640 efc4a4e3c38fd9bed64f5911ebd7d64a 957 Gene3D G3DSA:3.30.460.10 649 822 4.6E-59 T 29-03-2018 CVS42_RS03640 efc4a4e3c38fd9bed64f5911ebd7d64a 957 Gene3D G3DSA:3.30.460.10 125 297 3.9E-55 T 29-03-2018 CVS42_RS03640 efc4a4e3c38fd9bed64f5911ebd7d64a 957 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 39 957 19.377 T 29-03-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 CVS42_RS03640 efc4a4e3c38fd9bed64f5911ebd7d64a 957 SUPERFAMILY SSF81593 300 449 1.73E-42 T 29-03-2018 CVS42_RS03640 efc4a4e3c38fd9bed64f5911ebd7d64a 957 Gene3D G3DSA:1.10.4050.10 518 648 3.2E-21 T 29-03-2018 CVS42_RS03640 efc4a4e3c38fd9bed64f5911ebd7d64a 957 Gene3D G3DSA:1.10.4050.10 12 123 2.5E-18 T 29-03-2018 CVS42_RS03640 efc4a4e3c38fd9bed64f5911ebd7d64a 957 SUPERFAMILY SSF81301 538 824 1.06E-90 T 29-03-2018 CVS42_RS03640 efc4a4e3c38fd9bed64f5911ebd7d64a 957 SUPERFAMILY SSF81593 826 955 5.57E-30 T 29-03-2018 CVS42_RS03640 efc4a4e3c38fd9bed64f5911ebd7d64a 957 Gene3D G3DSA:1.20.120.330 823 957 3.1E-37 T 29-03-2018 CVS42_RS03640 efc4a4e3c38fd9bed64f5911ebd7d64a 957 Pfam PF08335 GlnD PII-uridylyltransferase 837 929 3.8E-11 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CVS42_RS03640 efc4a4e3c38fd9bed64f5911ebd7d64a 957 Pfam PF08335 GlnD PII-uridylyltransferase 310 448 1.0E-41 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CVS42_RS03640 efc4a4e3c38fd9bed64f5911ebd7d64a 957 SUPERFAMILY SSF81301 38 299 3.82E-85 T 29-03-2018 CVS42_RS03640 efc4a4e3c38fd9bed64f5911ebd7d64a 957 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 42 283 3.7E-90 T 29-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CVS42_RS03640 efc4a4e3c38fd9bed64f5911ebd7d64a 957 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 564 816 7.0E-95 T 29-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CVS42_RS18025 6b371b83cb6683790068b0c8d5d9aa26 257 SUPERFAMILY SSF51569 5 241 8.58E-81 T 29-03-2018 CVS42_RS18025 6b371b83cb6683790068b0c8d5d9aa26 257 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 225 2.0E-78 T 29-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CVS42_RS18025 6b371b83cb6683790068b0c8d5d9aa26 257 Pfam PF01791 DeoC/LacD family aldolase 12 240 1.2E-46 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CVS42_RS18025 6b371b83cb6683790068b0c8d5d9aa26 257 PIRSF PIRSF001357 5 251 5.8E-75 T 29-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CVS42_RS18025 6b371b83cb6683790068b0c8d5d9aa26 257 Gene3D G3DSA:3.20.20.70 1 255 1.7E-82 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS18025 6b371b83cb6683790068b0c8d5d9aa26 257 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 257 53.978 T 29-03-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 CVS42_RS18025 6b371b83cb6683790068b0c8d5d9aa26 257 SMART SM01133 10 243 6.8E-79 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CVS42_RS15875 72ebabe1a474ed321e98f80fe64b8a88 240 Gene3D G3DSA:1.10.10.10 171 239 3.2E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS15875 72ebabe1a474ed321e98f80fe64b8a88 240 Pfam PF03472 Autoinducer binding domain 24 162 3.4E-13 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CVS42_RS15875 72ebabe1a474ed321e98f80fe64b8a88 240 SUPERFAMILY SSF46894 162 236 1.97E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS15875 72ebabe1a474ed321e98f80fe64b8a88 240 SMART SM00421 175 232 7.3E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS15875 72ebabe1a474ed321e98f80fe64b8a88 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 192 3.7E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS15875 72ebabe1a474ed321e98f80fe64b8a88 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 208 220 3.7E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS15875 72ebabe1a474ed321e98f80fe64b8a88 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 208 3.7E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS15875 72ebabe1a474ed321e98f80fe64b8a88 240 SUPERFAMILY SSF75516 16 169 4.18E-13 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CVS42_RS15875 72ebabe1a474ed321e98f80fe64b8a88 240 Gene3D G3DSA:3.30.450.80 1 170 1.6E-25 T 29-03-2018 CVS42_RS15875 72ebabe1a474ed321e98f80fe64b8a88 240 TIGRFAM TIGR03541 reg_near_HchA: LuxR family transcriptional regulatory, chaperone HchA-associated 11 238 2.0E-87 T 29-03-2018 IPR019941 Transcription regulator LuxR, chaperone HchA-associated CVS42_RS15875 72ebabe1a474ed321e98f80fe64b8a88 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 178 232 1.8E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS10800 2b51d4a26e3f9572a6d6b77e0083d4db 496 SMART SM00331 286 493 1.7E-11 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CVS42_RS10800 2b51d4a26e3f9572a6d6b77e0083d4db 496 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 308 492 5.1E-26 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CVS42_RS10800 2b51d4a26e3f9572a6d6b77e0083d4db 496 Gene3D G3DSA:3.60.40.10 261 494 2.5E-20 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CVS42_RS10800 2b51d4a26e3f9572a6d6b77e0083d4db 496 SMART SM00448 135 247 9.2E-20 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS10800 2b51d4a26e3f9572a6d6b77e0083d4db 496 SUPERFAMILY SSF81606 297 492 1.96E-12 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CVS42_RS10800 2b51d4a26e3f9572a6d6b77e0083d4db 496 Pfam PF13581 Histidine kinase-like ATPase domain 9 126 7.6E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS10800 2b51d4a26e3f9572a6d6b77e0083d4db 496 SUPERFAMILY SSF52172 137 272 1.71E-29 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS10800 2b51d4a26e3f9572a6d6b77e0083d4db 496 Gene3D G3DSA:3.30.565.10 2 134 2.3E-10 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS10800 2b51d4a26e3f9572a6d6b77e0083d4db 496 SUPERFAMILY SSF55874 31 117 1.1E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS10800 2b51d4a26e3f9572a6d6b77e0083d4db 496 Gene3D G3DSA:3.40.50.2300 136 260 6.5E-28 T 29-03-2018 CVS42_RS10800 2b51d4a26e3f9572a6d6b77e0083d4db 496 Pfam PF00072 Response regulator receiver domain 137 247 1.5E-20 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS17850 6f192de375cad9ebec34250ad44d76bf 615 Gene3D G3DSA:1.25.40.10 23 239 4.4E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS17850 6f192de375cad9ebec34250ad44d76bf 615 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 453 613 9.9E-50 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS17850 6f192de375cad9ebec34250ad44d76bf 615 SUPERFAMILY SSF48452 147 336 3.8E-16 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS17850 6f192de375cad9ebec34250ad44d76bf 615 Gene3D G3DSA:1.25.40.10 240 427 7.1E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS17850 6f192de375cad9ebec34250ad44d76bf 615 SUPERFAMILY SSF55073 460 612 4.24E-49 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS17850 6f192de375cad9ebec34250ad44d76bf 615 SUPERFAMILY SSF48452 69 174 3.22E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS17850 6f192de375cad9ebec34250ad44d76bf 615 Pfam PF00990 Diguanylate cyclase, GGDEF domain 455 610 1.9E-45 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS17850 6f192de375cad9ebec34250ad44d76bf 615 Gene3D G3DSA:3.30.70.270 445 615 1.7E-57 T 29-03-2018 CVS42_RS17850 6f192de375cad9ebec34250ad44d76bf 615 SMART SM00028 184 217 49.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS17850 6f192de375cad9ebec34250ad44d76bf 615 SMART SM00028 144 177 410.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS17850 6f192de375cad9ebec34250ad44d76bf 615 SMART SM00028 104 137 34.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS17850 6f192de375cad9ebec34250ad44d76bf 615 SMART SM00028 224 257 120.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS17850 6f192de375cad9ebec34250ad44d76bf 615 SMART SM00028 344 377 130.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS17850 6f192de375cad9ebec34250ad44d76bf 615 SMART SM00267 444 614 4.7E-59 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS17850 6f192de375cad9ebec34250ad44d76bf 615 Pfam PF13424 Tetratricopeptide repeat 186 255 3.5E-9 T 29-03-2018 CVS42_RS08555 28feda5ad16cb670199da54a1581522d 168 Pfam PF13673 Acetyltransferase (GNAT) domain 48 145 1.6E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS08555 28feda5ad16cb670199da54a1581522d 168 SUPERFAMILY SSF55729 11 168 8.02E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS08555 28feda5ad16cb670199da54a1581522d 168 Gene3D G3DSA:3.40.630.30 2 168 2.4E-28 T 29-03-2018 CVS42_RS02015 5db831d7ec92bdc49d477ad7e910088d 239 SUPERFAMILY SSF51735 5 239 8.89E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS02015 5db831d7ec92bdc49d477ad7e910088d 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.3E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02015 5db831d7ec92bdc49d477ad7e910088d 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.3E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02015 5db831d7ec92bdc49d477ad7e910088d 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.3E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02015 5db831d7ec92bdc49d477ad7e910088d 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 220 2.3E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02015 5db831d7ec92bdc49d477ad7e910088d 239 Pfam PF00106 short chain dehydrogenase 5 195 1.7E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02015 5db831d7ec92bdc49d477ad7e910088d 239 Gene3D G3DSA:3.40.50.720 3 235 1.3E-33 T 29-03-2018 CVS42_RS20370 7497b8bf87d46f7a0d49c6a2f7da303e 411 Pfam PF01979 Amidohydrolase family 66 382 5.6E-17 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CVS42_RS20370 7497b8bf87d46f7a0d49c6a2f7da303e 411 Hamap MF_00372 Imidazolonepropionase [hutI]. 9 408 40.646 T 29-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CVS42_RS20370 7497b8bf87d46f7a0d49c6a2f7da303e 411 TIGRFAM TIGR01224 hutI: imidazolonepropionase 33 406 4.5E-143 T 29-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CVS42_RS20370 7497b8bf87d46f7a0d49c6a2f7da303e 411 Gene3D G3DSA:3.20.20.140 83 368 8.0E-57 T 29-03-2018 CVS42_RS20370 7497b8bf87d46f7a0d49c6a2f7da303e 411 SUPERFAMILY SSF51338 8 69 6.05E-27 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS20370 7497b8bf87d46f7a0d49c6a2f7da303e 411 SUPERFAMILY SSF51338 370 408 6.05E-27 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS20370 7497b8bf87d46f7a0d49c6a2f7da303e 411 SUPERFAMILY SSF51556 69 369 6.33E-89 T 29-03-2018 IPR032466 Metal-dependent hydrolase CVS42_RS20370 7497b8bf87d46f7a0d49c6a2f7da303e 411 Gene3D G3DSA:2.30.40.10 7 82 5.2E-16 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 505 511 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 SUPERFAMILY SSF81665 735 774 3.79E-11 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 SUPERFAMILY SSF81665 406 497 3.79E-11 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 SUPERFAMILY SSF81665 255 305 3.79E-11 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 226 792 1.2E-141 T 29-03-2018 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 244 792 3.5E-158 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 278 767 4.9E-69 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 Gene3D G3DSA:2.70.150.10 141 404 1.9E-28 T 29-03-2018 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 Pfam PF00702 haloacid dehalogenase-like hydrolase 501 703 1.3E-36 T 29-03-2018 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 Pfam PF00403 Heavy-metal-associated domain 93 152 3.9E-9 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 Gene3D G3DSA:3.30.70.100 87 140 1.0E-13 T 29-03-2018 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 355 369 1.4E-21 T 29-03-2018 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 637 647 1.4E-21 T 29-03-2018 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 503 517 1.4E-21 T 29-03-2018 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 713 725 1.4E-21 T 29-03-2018 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 690 709 1.4E-21 T 29-03-2018 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 276 793 5.5E-117 T 29-03-2018 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 SUPERFAMILY SSF81653 308 404 1.18E-23 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 Gene3D G3DSA:3.40.50.1000 468 747 5.6E-39 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 SUPERFAMILY SSF55008 86 160 2.09E-17 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 84 5.4E-25 T 29-03-2018 IPR021993 Putative metal-binding domain of cation transport ATPase CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 Pfam PF00122 E1-E2 ATPase 306 483 2.7E-48 T 29-03-2018 CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 SUPERFAMILY SSF56784 559 790 2.51E-47 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS09770 d5771dbf894e876a2dd5a8e45687009b 794 SUPERFAMILY SSF56784 502 521 2.51E-47 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS15515 d58c317b22efb28d934c31f2326eda5d 203 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 115 200 9.2E-24 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CVS42_RS15515 d58c317b22efb28d934c31f2326eda5d 203 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 5 106 3.5E-25 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CVS42_RS15515 d58c317b22efb28d934c31f2326eda5d 203 SUPERFAMILY SSF54534 6 202 2.55E-55 T 29-03-2018 CVS42_RS15515 d58c317b22efb28d934c31f2326eda5d 203 Gene3D G3DSA:3.10.50.40 88 203 5.5E-39 T 29-03-2018 CVS42_RS15515 d58c317b22efb28d934c31f2326eda5d 203 Gene3D G3DSA:1.10.287.460 2 87 7.0E-22 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CVS42_RS18620 efef8554459d22501cdb79973cc98787 112 PIRSF PIRSF002599 9 111 2.7E-19 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CVS42_RS18620 efef8554459d22501cdb79973cc98787 112 Pfam PF06961 Protein of unknown function (DUF1294) 32 86 1.4E-23 T 29-03-2018 IPR010718 Protein of unknown function DUF1294 CVS42_RS09125 f0144fd1f6d9a71a8d2924b4269983c1 102 Pfam PF04269 Protein of unknown function, DUF440 3 99 3.5E-38 T 29-03-2018 IPR007376 dsDNA mimic, putative CVS42_RS09125 f0144fd1f6d9a71a8d2924b4269983c1 102 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 5 99 4.0E-18 T 29-03-2018 IPR007376 dsDNA mimic, putative CVS42_RS09125 f0144fd1f6d9a71a8d2924b4269983c1 102 SUPERFAMILY SSF102816 4 99 1.57E-26 T 29-03-2018 IPR007376 dsDNA mimic, putative CVS42_RS09125 f0144fd1f6d9a71a8d2924b4269983c1 102 PIRSF PIRSF004916 1 101 1.8E-26 T 29-03-2018 IPR007376 dsDNA mimic, putative CVS42_RS09125 f0144fd1f6d9a71a8d2924b4269983c1 102 Gene3D G3DSA:3.10.450.140 3 100 6.6E-34 T 29-03-2018 IPR007376 dsDNA mimic, putative CVS42_RS02690 bd8d0b461a3ab5c06c9a9a57500e4e4b 235 Gene3D G3DSA:1.10.8.10 154 215 2.0E-15 T 29-03-2018 CVS42_RS02690 bd8d0b461a3ab5c06c9a9a57500e4e4b 235 SUPERFAMILY SSF110849 29 224 2.25E-58 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CVS42_RS02690 bd8d0b461a3ab5c06c9a9a57500e4e4b 235 Pfam PF08857 Putative ParB-like nuclease 32 186 3.4E-49 T 29-03-2018 IPR014956 Putative ParB-like nuclease CVS42_RS02690 bd8d0b461a3ab5c06c9a9a57500e4e4b 235 Gene3D G3DSA:3.90.1530.10 25 153 3.6E-39 T 29-03-2018 CVS42_RS02690 bd8d0b461a3ab5c06c9a9a57500e4e4b 235 PIRSF PIRSF029669 21 227 1.6E-64 T 29-03-2018 IPR016932 Uncharacterised conserved protein UCP029669 CVS42_RS02550 653cf12e1601b5e122d4452c42f7cf6f 349 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 133 240 4.0E-12 T 29-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CVS42_RS02550 653cf12e1601b5e122d4452c42f7cf6f 349 SUPERFAMILY SSF51735 3 196 4.11E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS02550 653cf12e1601b5e122d4452c42f7cf6f 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 119 1.9E-23 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CVS42_RS02550 653cf12e1601b5e122d4452c42f7cf6f 349 Gene3D G3DSA:3.40.50.720 1 133 3.8E-39 T 29-03-2018 CVS42_RS02550 653cf12e1601b5e122d4452c42f7cf6f 349 Gene3D G3DSA:3.30.360.10 134 348 2.3E-37 T 29-03-2018 CVS42_RS21200 82ac1b23eee4c94f1cca74b8f9e2486a 364 Pfam PF00691 OmpA family 245 336 6.4E-21 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS21200 82ac1b23eee4c94f1cca74b8f9e2486a 364 PRINTS PR01022 Outer membrane protein A signature 335 348 1.1E-21 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CVS42_RS21200 82ac1b23eee4c94f1cca74b8f9e2486a 364 PRINTS PR01022 Outer membrane protein A signature 302 321 1.1E-21 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CVS42_RS21200 82ac1b23eee4c94f1cca74b8f9e2486a 364 PRINTS PR01022 Outer membrane protein A signature 120 136 1.1E-21 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CVS42_RS21200 82ac1b23eee4c94f1cca74b8f9e2486a 364 PRINTS PR01022 Outer membrane protein A signature 234 249 1.1E-21 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CVS42_RS21200 82ac1b23eee4c94f1cca74b8f9e2486a 364 PRINTS PR01022 Outer membrane protein A signature 263 282 1.1E-21 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CVS42_RS21200 82ac1b23eee4c94f1cca74b8f9e2486a 364 SUPERFAMILY SSF56925 22 211 4.97E-34 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS21200 82ac1b23eee4c94f1cca74b8f9e2486a 364 SUPERFAMILY SSF103088 233 356 1.12E-30 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS21200 82ac1b23eee4c94f1cca74b8f9e2486a 364 Gene3D G3DSA:3.30.1330.60 228 364 2.8E-34 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS21200 82ac1b23eee4c94f1cca74b8f9e2486a 364 ProSitePatterns PS01068 OmpA-like domain. 280 324 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CVS42_RS21200 82ac1b23eee4c94f1cca74b8f9e2486a 364 Pfam PF01389 OmpA-like transmembrane domain 24 212 6.4E-42 T 29-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 CVS42_RS21200 82ac1b23eee4c94f1cca74b8f9e2486a 364 Gene3D G3DSA:2.40.160.20 11 227 1.2E-41 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS21200 82ac1b23eee4c94f1cca74b8f9e2486a 364 PRINTS PR01021 OMPA domain signature 278 293 6.5E-21 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS21200 82ac1b23eee4c94f1cca74b8f9e2486a 364 PRINTS PR01021 OMPA domain signature 246 268 6.5E-21 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS21200 82ac1b23eee4c94f1cca74b8f9e2486a 364 PRINTS PR01021 OMPA domain signature 293 309 6.5E-21 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS08395 9fb1990d7ed93ae50be1cb8e18e3f241 347 SUPERFAMILY SSF51197 3 283 3.02E-78 T 29-03-2018 CVS42_RS08395 9fb1990d7ed93ae50be1cb8e18e3f241 347 Gene3D G3DSA:2.60.120.330 1 308 2.8E-82 T 29-03-2018 IPR027443 Isopenicillin N synthase-like CVS42_RS08395 9fb1990d7ed93ae50be1cb8e18e3f241 347 PRINTS PR00682 Isopenicillin N synthase signature 234 260 2.9E-10 T 29-03-2018 CVS42_RS08395 9fb1990d7ed93ae50be1cb8e18e3f241 347 PRINTS PR00682 Isopenicillin N synthase signature 199 220 2.9E-10 T 29-03-2018 CVS42_RS08395 9fb1990d7ed93ae50be1cb8e18e3f241 347 PRINTS PR00682 Isopenicillin N synthase signature 28 45 2.9E-10 T 29-03-2018 CVS42_RS08395 9fb1990d7ed93ae50be1cb8e18e3f241 347 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 177 273 1.1E-19 T 29-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CVS42_RS08395 9fb1990d7ed93ae50be1cb8e18e3f241 347 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 6 129 2.8E-32 T 29-03-2018 IPR026992 Non-haem dioxygenase N-terminal domain CVS42_RS17390 7e78804acccca77177c542d8c676330e 295 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 287 2.7E-108 T 29-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS17390 7e78804acccca77177c542d8c676330e 295 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 29-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS17390 7e78804acccca77177c542d8c676330e 295 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 29-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CVS42_RS17390 7e78804acccca77177c542d8c676330e 295 SMART SM01130 1 290 4.3E-137 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CVS42_RS17390 7e78804acccca77177c542d8c676330e 295 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 6.9E-104 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CVS42_RS17390 7e78804acccca77177c542d8c676330e 295 SUPERFAMILY SSF51569 1 290 1.36E-98 T 29-03-2018 CVS42_RS17390 7e78804acccca77177c542d8c676330e 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 3.0E-33 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CVS42_RS17390 7e78804acccca77177c542d8c676330e 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 3.0E-33 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CVS42_RS17390 7e78804acccca77177c542d8c676330e 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 3.0E-33 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CVS42_RS17390 7e78804acccca77177c542d8c676330e 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 3.0E-33 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CVS42_RS17390 7e78804acccca77177c542d8c676330e 295 PIRSF PIRSF001365 1 294 5.9E-91 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CVS42_RS17390 7e78804acccca77177c542d8c676330e 295 Gene3D G3DSA:3.20.20.70 1 295 7.0E-94 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS17390 7e78804acccca77177c542d8c676330e 295 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 63.387 T 29-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS10060 ec37b1b29f76b7d206a2440e6ea37591 342 SUPERFAMILY SSF56349 147 337 1.41E-33 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CVS42_RS10060 ec37b1b29f76b7d206a2440e6ea37591 342 Pfam PF00589 Phage integrase family 163 329 1.0E-13 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS10060 ec37b1b29f76b7d206a2440e6ea37591 342 Gene3D G3DSA:1.10.443.10 150 333 4.4E-22 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS10060 ec37b1b29f76b7d206a2440e6ea37591 342 Gene3D G3DSA:1.10.150.130 21 149 2.2E-9 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CVS42_RS10060 ec37b1b29f76b7d206a2440e6ea37591 342 SUPERFAMILY SSF47823 29 146 1.1E-21 T 29-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CVS42_RS00845 4eb46ce19edbaa09856e63d215e0feea 100 Pfam PF00034 Cytochrome c 27 100 2.8E-8 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS00845 4eb46ce19edbaa09856e63d215e0feea 100 Gene3D G3DSA:1.10.760.10 11 99 1.1E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS00845 4eb46ce19edbaa09856e63d215e0feea 100 SUPERFAMILY SSF46626 11 99 7.34E-23 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS13655 13aa5ad37c820d179fa8566a223cff85 399 SMART SM00471 156 292 1.3E-7 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS13655 13aa5ad37c820d179fa8566a223cff85 399 Pfam PF13487 HD domain 211 273 1.7E-19 T 29-03-2018 CVS42_RS13655 13aa5ad37c820d179fa8566a223cff85 399 TIGRFAM TIGR00277 HDIG: HDIG domain 160 251 3.6E-8 T 29-03-2018 IPR006675 HDIG domain CVS42_RS13655 13aa5ad37c820d179fa8566a223cff85 399 Pfam PF11871 Domain of unknown function (DUF3391) 10 128 3.5E-14 T 29-03-2018 IPR021812 Protein of unknown function DUF3391 CVS42_RS13655 13aa5ad37c820d179fa8566a223cff85 399 SUPERFAMILY SSF109604 152 322 1.21E-32 T 29-03-2018 CVS42_RS13655 13aa5ad37c820d179fa8566a223cff85 399 Gene3D G3DSA:1.10.3210.10 60 325 3.8E-45 T 29-03-2018 CVS42_RS09850 830695e3ad427b3bafe92441f54dd2cc 87 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 3.5E-16 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS09850 830695e3ad427b3bafe92441f54dd2cc 87 SUPERFAMILY SSF143800 1 81 5.49E-21 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS09850 830695e3ad427b3bafe92441f54dd2cc 87 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.4E-14 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS09850 830695e3ad427b3bafe92441f54dd2cc 87 PRINTS PR01249 Ribosomal protein L31 signature 45 60 3.4E-14 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS09850 830695e3ad427b3bafe92441f54dd2cc 87 PRINTS PR01249 Ribosomal protein L31 signature 60 78 3.4E-14 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS09850 830695e3ad427b3bafe92441f54dd2cc 87 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 27.175 T 29-03-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS09850 830695e3ad427b3bafe92441f54dd2cc 87 Pfam PF01197 Ribosomal protein L31 1 79 1.3E-24 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01050 cdd4433821945291fab743428e0b2312 157 Gene3D G3DSA:1.10.287.180 3 75 5.7E-28 T 29-03-2018 CVS42_RS01050 cdd4433821945291fab743428e0b2312 157 PIRSF PIRSF006092 1 157 7.3E-45 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CVS42_RS01050 cdd4433821945291fab743428e0b2312 157 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 53.137 T 29-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CVS42_RS01050 cdd4433821945291fab743428e0b2312 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 119 135 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CVS42_RS01050 cdd4433821945291fab743428e0b2312 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 27.694 T 29-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CVS42_RS01050 cdd4433821945291fab743428e0b2312 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CVS42_RS01050 cdd4433821945291fab743428e0b2312 157 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 7.9E-80 T 29-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CVS42_RS01050 cdd4433821945291fab743428e0b2312 157 SUPERFAMILY SSF54534 80 155 4.71E-20 T 29-03-2018 CVS42_RS01050 cdd4433821945291fab743428e0b2312 157 SUPERFAMILY SSF46557 3 77 1.14E-26 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CVS42_RS01050 cdd4433821945291fab743428e0b2312 157 Pfam PF03449 Transcription elongation factor, N-terminal 5 72 1.0E-25 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CVS42_RS01050 cdd4433821945291fab743428e0b2312 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 1.4E-21 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CVS42_RS01050 cdd4433821945291fab743428e0b2312 157 Gene3D G3DSA:3.10.50.30 76 157 9.9E-22 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CVS42_RS00800 1124a7e4229b6bdcf923a3d15fbfd2ef 361 Gene3D G3DSA:3.40.190.10 23 178 3.2E-27 T 29-03-2018 CVS42_RS00800 1124a7e4229b6bdcf923a3d15fbfd2ef 361 Pfam PF13416 Bacterial extracellular solute-binding protein 40 323 3.9E-30 T 29-03-2018 CVS42_RS00800 1124a7e4229b6bdcf923a3d15fbfd2ef 361 PIRSF PIRSF019574 3 361 1.1E-137 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00800 1124a7e4229b6bdcf923a3d15fbfd2ef 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 87 100 8.0E-63 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00800 1124a7e4229b6bdcf923a3d15fbfd2ef 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 260 279 8.0E-63 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00800 1124a7e4229b6bdcf923a3d15fbfd2ef 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 71 85 8.0E-63 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00800 1124a7e4229b6bdcf923a3d15fbfd2ef 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 150 164 8.0E-63 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00800 1124a7e4229b6bdcf923a3d15fbfd2ef 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 44 65 8.0E-63 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00800 1124a7e4229b6bdcf923a3d15fbfd2ef 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 210 229 8.0E-63 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00800 1124a7e4229b6bdcf923a3d15fbfd2ef 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 8.0E-63 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00800 1124a7e4229b6bdcf923a3d15fbfd2ef 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 173 192 8.0E-63 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00800 1124a7e4229b6bdcf923a3d15fbfd2ef 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 305 331 8.0E-63 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00800 1124a7e4229b6bdcf923a3d15fbfd2ef 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 28 44 8.0E-63 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00800 1124a7e4229b6bdcf923a3d15fbfd2ef 361 SUPERFAMILY SSF53850 24 360 8.69E-98 T 29-03-2018 CVS42_RS00800 1124a7e4229b6bdcf923a3d15fbfd2ef 361 Gene3D G3DSA:3.40.190.10 180 351 1.6E-17 T 29-03-2018 CVS42_RS09390 241a4a97798176c667320d27d2ff9f7f 253 Pfam PF00977 Histidine biosynthesis protein 1 233 2.0E-74 T 29-03-2018 IPR006062 Histidine biosynthesis GO:0000105 CVS42_RS09390 241a4a97798176c667320d27d2ff9f7f 253 Gene3D G3DSA:3.20.20.70 1 245 2.4E-53 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS09390 241a4a97798176c667320d27d2ff9f7f 253 SUPERFAMILY SSF51366 1 242 4.83E-64 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CVS42_RS09390 241a4a97798176c667320d27d2ff9f7f 253 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.013 T 29-03-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CVS42_RS09390 241a4a97798176c667320d27d2ff9f7f 253 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 236 1.3E-77 T 29-03-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CVS42_RS05525 f05b890048157fc57c87227afc5458f7 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 347 3.1E-123 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS05525 f05b890048157fc57c87227afc5458f7 376 Gene3D G3DSA:3.40.1690.10 217 353 4.3E-55 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CVS42_RS05525 f05b890048157fc57c87227afc5458f7 376 SUPERFAMILY SSF160544 243 351 3.27E-39 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CVS42_RS05525 f05b890048157fc57c87227afc5458f7 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 6 352 2.7E-125 T 29-03-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 CVS42_RS05525 f05b890048157fc57c87227afc5458f7 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 207 225 1.6E-37 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS05525 f05b890048157fc57c87227afc5458f7 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 227 244 1.6E-37 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS05525 f05b890048157fc57c87227afc5458f7 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 271 286 1.6E-37 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS05525 f05b890048157fc57c87227afc5458f7 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.6E-37 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS05525 f05b890048157fc57c87227afc5458f7 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 1.6E-37 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS07240 9d234768a5f788cf1c6357fd178f3a2b 108 Pfam PF12840 Helix-turn-helix domain 7 69 7.9E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS07240 9d234768a5f788cf1c6357fd178f3a2b 108 SMART SM00418 8 89 1.1E-6 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CVS42_RS07240 9d234768a5f788cf1c6357fd178f3a2b 108 Gene3D G3DSA:1.10.10.10 1 99 4.1E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS07240 9d234768a5f788cf1c6357fd178f3a2b 108 SUPERFAMILY SSF46785 2 93 7.05E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS15880 cfbf5db496b9bf2d058d798e39a1a8c0 287 SUPERFAMILY SSF52317 8 281 2.59E-50 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS15880 cfbf5db496b9bf2d058d798e39a1a8c0 287 Gene3D G3DSA:3.40.50.880 3 287 3.0E-54 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS15880 cfbf5db496b9bf2d058d798e39a1a8c0 287 Pfam PF01965 DJ-1/PfpI family 78 268 2.5E-7 T 29-03-2018 IPR002818 DJ-1/PfpI CVS42_RS15880 cfbf5db496b9bf2d058d798e39a1a8c0 287 PIRSF PIRSF037798 1 287 1.4E-144 T 29-03-2018 IPR017283 Protein deglycase HchA CVS42_RS18820 cfe1c4f9ceae17947a66f4820f2c5bc1 510 Gene3D G3DSA:3.40.1190.10 117 353 1.6E-52 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS18820 cfe1c4f9ceae17947a66f4820f2c5bc1 510 SUPERFAMILY SSF53623 117 349 1.57E-73 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS18820 cfe1c4f9ceae17947a66f4820f2c5bc1 510 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 11 502 34.251 T 29-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CVS42_RS18820 cfe1c4f9ceae17947a66f4820f2c5bc1 510 Gene3D G3DSA:3.40.1390.10 18 116 1.1E-23 T 29-03-2018 CVS42_RS18820 cfe1c4f9ceae17947a66f4820f2c5bc1 510 Pfam PF01225 Mur ligase family, catalytic domain 39 113 1.5E-13 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CVS42_RS18820 cfe1c4f9ceae17947a66f4820f2c5bc1 510 Gene3D G3DSA:3.90.190.20 354 506 8.6E-48 T 29-03-2018 CVS42_RS18820 cfe1c4f9ceae17947a66f4820f2c5bc1 510 Pfam PF08245 Mur ligase middle domain 126 329 3.4E-47 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS18820 cfe1c4f9ceae17947a66f4820f2c5bc1 510 SUPERFAMILY SSF63418 22 115 3.01E-23 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CVS42_RS18820 cfe1c4f9ceae17947a66f4820f2c5bc1 510 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 37 502 5.9E-170 T 29-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CVS42_RS18820 cfe1c4f9ceae17947a66f4820f2c5bc1 510 Pfam PF02875 Mur ligase family, glutamate ligase domain 350 435 5.1E-23 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CVS42_RS18820 cfe1c4f9ceae17947a66f4820f2c5bc1 510 SUPERFAMILY SSF53244 350 504 2.29E-49 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CVS42_RS08505 e7462b7e3b2a2f1a8dd1e10ef0a25840 144 Gene3D G3DSA:3.40.30.10 41 143 7.1E-33 T 29-03-2018 CVS42_RS08505 e7462b7e3b2a2f1a8dd1e10ef0a25840 144 Pfam PF00085 Thioredoxin 45 139 1.3E-29 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 CVS42_RS08505 e7462b7e3b2a2f1a8dd1e10ef0a25840 144 PRINTS PR00421 Thioredoxin family signature 106 117 2.2E-8 T 29-03-2018 CVS42_RS08505 e7462b7e3b2a2f1a8dd1e10ef0a25840 144 PRINTS PR00421 Thioredoxin family signature 66 75 2.2E-8 T 29-03-2018 CVS42_RS08505 e7462b7e3b2a2f1a8dd1e10ef0a25840 144 PRINTS PR00421 Thioredoxin family signature 58 66 2.2E-8 T 29-03-2018 CVS42_RS08505 e7462b7e3b2a2f1a8dd1e10ef0a25840 144 SUPERFAMILY SSF52833 28 141 7.12E-37 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS08505 e7462b7e3b2a2f1a8dd1e10ef0a25840 144 ProSitePatterns PS00194 Thioredoxin family active site. 59 77 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CVS42_RS08505 e7462b7e3b2a2f1a8dd1e10ef0a25840 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 141 3.1E-35 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CVS42_RS15520 01eec7e097e1037e16842cb574fbc7cf 241 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 239 37.047 T 29-03-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 CVS42_RS15520 01eec7e097e1037e16842cb574fbc7cf 241 SUPERFAMILY SSF110395 4 239 7.06E-71 T 29-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 CVS42_RS15520 01eec7e097e1037e16842cb574fbc7cf 241 Gene3D G3DSA:3.20.20.380 1 241 1.5E-83 T 29-03-2018 CVS42_RS15520 01eec7e097e1037e16842cb574fbc7cf 241 Pfam PF03932 CutC family 4 201 1.7E-74 T 29-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 CVS42_RS09560 b884ea04df92d9a3e7b5eab56412c2d4 377 SUPERFAMILY SSF47240 3 341 1.58E-109 T 29-03-2018 IPR009078 Ferritin-like superfamily CVS42_RS09560 b884ea04df92d9a3e7b5eab56412c2d4 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 29-03-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS09560 b884ea04df92d9a3e7b5eab56412c2d4 377 Gene3D G3DSA:1.10.620.20 1 347 5.5E-115 T 29-03-2018 CVS42_RS09560 b884ea04df92d9a3e7b5eab56412c2d4 377 Pfam PF00268 Ribonucleotide reductase, small chain 32 333 2.1E-48 T 29-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS02410 ceca0ce9f34a60f22de11bdedc2cdb7d 345 SUPERFAMILY SSF56925 23 198 4.71E-33 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS02410 ceca0ce9f34a60f22de11bdedc2cdb7d 345 PRINTS PR01021 OMPA domain signature 259 274 9.8E-24 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS02410 ceca0ce9f34a60f22de11bdedc2cdb7d 345 PRINTS PR01021 OMPA domain signature 274 290 9.8E-24 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS02410 ceca0ce9f34a60f22de11bdedc2cdb7d 345 PRINTS PR01021 OMPA domain signature 227 249 9.8E-24 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS02410 ceca0ce9f34a60f22de11bdedc2cdb7d 345 Pfam PF00691 OmpA family 226 314 1.2E-23 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS02410 ceca0ce9f34a60f22de11bdedc2cdb7d 345 Gene3D G3DSA:2.40.160.20 10 210 7.0E-40 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS02410 ceca0ce9f34a60f22de11bdedc2cdb7d 345 SUPERFAMILY SSF103088 216 337 8.89E-32 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS02410 ceca0ce9f34a60f22de11bdedc2cdb7d 345 PRINTS PR01022 Outer membrane protein A signature 168 182 5.3E-34 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CVS42_RS02410 ceca0ce9f34a60f22de11bdedc2cdb7d 345 PRINTS PR01022 Outer membrane protein A signature 244 263 5.3E-34 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CVS42_RS02410 ceca0ce9f34a60f22de11bdedc2cdb7d 345 PRINTS PR01022 Outer membrane protein A signature 112 128 5.3E-34 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CVS42_RS02410 ceca0ce9f34a60f22de11bdedc2cdb7d 345 PRINTS PR01022 Outer membrane protein A signature 182 196 5.3E-34 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CVS42_RS02410 ceca0ce9f34a60f22de11bdedc2cdb7d 345 PRINTS PR01022 Outer membrane protein A signature 215 230 5.3E-34 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CVS42_RS02410 ceca0ce9f34a60f22de11bdedc2cdb7d 345 PRINTS PR01022 Outer membrane protein A signature 283 302 5.3E-34 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CVS42_RS02410 ceca0ce9f34a60f22de11bdedc2cdb7d 345 PRINTS PR01022 Outer membrane protein A signature 316 329 5.3E-34 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CVS42_RS02410 ceca0ce9f34a60f22de11bdedc2cdb7d 345 Gene3D G3DSA:3.30.1330.60 211 345 2.5E-37 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS02410 ceca0ce9f34a60f22de11bdedc2cdb7d 345 Pfam PF01389 OmpA-like transmembrane domain 23 196 8.9E-41 T 29-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 CVS42_RS02410 ceca0ce9f34a60f22de11bdedc2cdb7d 345 ProSitePatterns PS01068 OmpA-like domain. 261 305 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CVS42_RS17525 75b9267aa87f149ce0291c1a6da2ba5e 572 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 567 7.4E-267 T 29-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CVS42_RS17525 75b9267aa87f149ce0291c1a6da2ba5e 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 167 1.7E-60 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CVS42_RS17525 75b9267aa87f149ce0291c1a6da2ba5e 572 SUPERFAMILY SSF52467 190 362 1.77E-64 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CVS42_RS17525 75b9267aa87f149ce0291c1a6da2ba5e 572 Gene3D G3DSA:3.40.50.970 1 193 1.7E-66 T 29-03-2018 CVS42_RS17525 75b9267aa87f149ce0291c1a6da2ba5e 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 3.4E-46 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CVS42_RS17525 75b9267aa87f149ce0291c1a6da2ba5e 572 SUPERFAMILY SSF52518 2 180 5.89E-65 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS17525 75b9267aa87f149ce0291c1a6da2ba5e 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 543 1.3E-50 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CVS42_RS17525 75b9267aa87f149ce0291c1a6da2ba5e 572 Gene3D G3DSA:3.40.50.1220 194 354 1.5E-54 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CVS42_RS17525 75b9267aa87f149ce0291c1a6da2ba5e 572 SUPERFAMILY SSF52518 372 565 4.11E-69 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS17525 75b9267aa87f149ce0291c1a6da2ba5e 572 Gene3D G3DSA:3.40.50.970 355 563 1.4E-53 T 29-03-2018 CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 435 452 5.9E-10 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 452 472 5.9E-10 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 SUPERFAMILY SSF52172 4 186 6.97E-44 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 Pfam PF00072 Response regulator receiver domain 5 114 3.0E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 Pfam PF02954 Bacterial regulatory protein, Fis family 429 469 8.9E-17 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 Pfam PF00158 Sigma-54 interaction domain 141 308 1.8E-70 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 SUPERFAMILY SSF52540 140 384 5.85E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 SMART SM00448 3 114 1.8E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 SUPERFAMILY SSF46689 396 471 1.12E-20 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 SMART SM00382 161 308 7.7E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 Gene3D G3DSA:3.40.50.2300 1 140 4.5E-37 T 29-03-2018 CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 Gene3D G3DSA:1.10.10.60 387 472 2.1E-18 T 29-03-2018 CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 Gene3D G3DSA:3.40.50.300 141 313 9.0E-28 T 29-03-2018 CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 Gene3D G3DSA:1.10.8.60 314 386 9.8E-23 T 29-03-2018 CVS42_RS21115 bb9ee2446f1738c94b3397e77ba63341 472 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 5 469 2.4E-231 T 29-03-2018 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 CVS42_RS11950 e04ddce718a400c26a9c89f539607b55 312 Gene3D G3DSA:1.10.10.10 3 84 1.4E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS11950 e04ddce718a400c26a9c89f539607b55 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.1E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS11950 e04ddce718a400c26a9c89f539607b55 312 Gene3D G3DSA:3.40.190.10 88 176 1.4E-5 T 29-03-2018 CVS42_RS11950 e04ddce718a400c26a9c89f539607b55 312 Pfam PF03466 LysR substrate binding domain 90 287 4.0E-29 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS11950 e04ddce718a400c26a9c89f539607b55 312 SUPERFAMILY SSF53850 90 293 5.97E-33 T 29-03-2018 CVS42_RS11950 e04ddce718a400c26a9c89f539607b55 312 SUPERFAMILY SSF46785 5 112 1.36E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS11950 e04ddce718a400c26a9c89f539607b55 312 Gene3D G3DSA:3.40.190.10 177 261 6.4E-20 T 29-03-2018 CVS42_RS00640 2a0d62ed86d0c8ca03e96db1b383e1b6 64 Pfam PF08410 Domain of unknown function (DUF1737) 13 59 1.1E-20 T 29-03-2018 IPR013619 Domain of unknown function DUF1737 CVS42_RS18230 d3a251396a883f4df60357be00d30ae8 82 SUPERFAMILY SSF54565 1 76 2.09E-27 T 29-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS18230 d3a251396a883f4df60357be00d30ae8 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 5.8E-29 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS18230 d3a251396a883f4df60357be00d30ae8 82 Gene3D G3DSA:3.30.1320.10 1 79 4.4E-30 T 29-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS18230 d3a251396a883f4df60357be00d30ae8 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.422 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS18230 d3a251396a883f4df60357be00d30ae8 82 Pfam PF00886 Ribosomal protein S16 8 68 4.0E-22 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS00765 3d1b3e7adbd62565f22d1ae672513aaa 164 PIRSF PIRSF003174 7 164 2.2E-62 T 29-03-2018 IPR010292 Uncharacterised protein family CreA CVS42_RS00765 3d1b3e7adbd62565f22d1ae672513aaa 164 Pfam PF05981 CreA protein 35 162 1.9E-54 T 29-03-2018 IPR010292 Uncharacterised protein family CreA CVS42_RS00035 a79068b74f8e7199ecf5101b4c854c44 244 SUPERFAMILY SSF52540 1 238 2.05E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00035 a79068b74f8e7199ecf5101b4c854c44 244 Gene3D G3DSA:3.40.50.300 1 244 9.6E-75 T 29-03-2018 CVS42_RS00035 a79068b74f8e7199ecf5101b4c854c44 244 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS00035 a79068b74f8e7199ecf5101b4c854c44 244 PIRSF PIRSF039085 1 244 7.4E-99 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CVS42_RS00035 a79068b74f8e7199ecf5101b4c854c44 244 SMART SM00382 26 216 1.2E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS00035 a79068b74f8e7199ecf5101b4c854c44 244 Pfam PF00005 ABC transporter 17 168 1.3E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS04555 887f1f7001af6c374614899da5272591 160 Pfam PF13488 Glycine zipper 83 123 2.2E-5 T 29-03-2018 CVS42_RS10380 869a0646e3855ef01a193ebdb15eb2d1 130 Gene3D G3DSA:1.10.1660.10 63 129 2.8E-14 T 29-03-2018 CVS42_RS10380 869a0646e3855ef01a193ebdb15eb2d1 130 SUPERFAMILY SSF46955 10 124 3.59E-26 T 29-03-2018 IPR009061 Putative DNA-binding domain CVS42_RS10380 869a0646e3855ef01a193ebdb15eb2d1 130 Gene3D G3DSA:1.10.1660.10 6 62 6.1E-19 T 29-03-2018 CVS42_RS10380 869a0646e3855ef01a193ebdb15eb2d1 130 Pfam PF13411 MerR HTH family regulatory protein 10 75 1.4E-16 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS10380 869a0646e3855ef01a193ebdb15eb2d1 130 SMART SM00422 10 77 6.5E-19 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS17315 bfe55ce01185ed4d0d8e812874746371 217 Gene3D G3DSA:1.10.3720.10 1 217 1.2E-39 T 29-03-2018 CVS42_RS17315 bfe55ce01185ed4d0d8e812874746371 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 202 3.1E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS17315 bfe55ce01185ed4d0d8e812874746371 217 SUPERFAMILY SSF161098 8 201 4.06E-47 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS21170 0805d8e99c4fbfccadeab5d8438835d3 180 Gene3D G3DSA:1.10.260.40 1 69 1.8E-14 T 29-03-2018 CVS42_RS21170 0805d8e99c4fbfccadeab5d8438835d3 180 Pfam PF01381 Helix-turn-helix 7 58 2.9E-10 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS21170 0805d8e99c4fbfccadeab5d8438835d3 180 SUPERFAMILY SSF51182 46 179 2.65E-28 T 29-03-2018 IPR011051 RmlC-like cupin domain CVS42_RS21170 0805d8e99c4fbfccadeab5d8438835d3 180 Pfam PF07883 Cupin domain 107 173 9.5E-19 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CVS42_RS21170 0805d8e99c4fbfccadeab5d8438835d3 180 SUPERFAMILY SSF47413 1 66 9.65E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS21170 0805d8e99c4fbfccadeab5d8438835d3 180 SMART SM00530 6 61 2.1E-10 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS21170 0805d8e99c4fbfccadeab5d8438835d3 180 Gene3D G3DSA:2.60.120.10 70 180 3.3E-19 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS16225 f804daa387124e816a48650216daad59 317 Gene3D G3DSA:1.10.1040.10 194 316 4.1E-37 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CVS42_RS16225 f804daa387124e816a48650216daad59 317 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 20 314 2.2E-71 T 29-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CVS42_RS16225 f804daa387124e816a48650216daad59 317 Pfam PF02558 Ketopantoate reductase PanE/ApbA 22 166 9.9E-27 T 29-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CVS42_RS16225 f804daa387124e816a48650216daad59 317 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 192 313 3.4E-36 T 29-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CVS42_RS16225 f804daa387124e816a48650216daad59 317 SUPERFAMILY SSF51735 19 189 4.87E-40 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS16225 f804daa387124e816a48650216daad59 317 Gene3D G3DSA:3.40.50.720 15 193 1.1E-16 T 29-03-2018 CVS42_RS16225 f804daa387124e816a48650216daad59 317 SUPERFAMILY SSF48179 193 313 4.08E-34 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CVS42_RS15895 1665874d2f516ff39f817922300a9822 270 Pfam PF11185 Protein of unknown function (DUF2971) 109 205 7.4E-13 T 29-03-2018 IPR021352 Protein of unknown function DUF2971 CVS42_RS18740 480a5e7b454405546b8687da8469010a 204 Gene3D G3DSA:3.40.50.300 1 204 2.5E-45 T 29-03-2018 CVS42_RS18740 480a5e7b454405546b8687da8469010a 204 Pfam PF01121 Dephospho-CoA kinase 2 177 2.1E-70 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CVS42_RS18740 480a5e7b454405546b8687da8469010a 204 SUPERFAMILY SSF52540 1 191 3.93E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS18740 480a5e7b454405546b8687da8469010a 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 181 2.8E-61 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CVS42_RS18740 480a5e7b454405546b8687da8469010a 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 192 27.316 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CVS42_RS03480 99669f863ce46b52d41c0c5772eb0bc4 371 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 30 357 1.1E-85 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CVS42_RS03480 99669f863ce46b52d41c0c5772eb0bc4 371 SUPERFAMILY SSF51395 27 359 5.5E-109 T 29-03-2018 CVS42_RS03480 99669f863ce46b52d41c0c5772eb0bc4 371 Gene3D G3DSA:3.20.20.70 15 369 8.6E-111 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 SUPERFAMILY SSF52343 376 506 3.93E-31 T 29-03-2018 CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 Pfam PF03473 MOSC domain 136 260 2.3E-27 T 29-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 SUPERFAMILY SSF50800 2 50 2.98E-16 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 SUPERFAMILY SSF50800 146 262 2.98E-16 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 473 481 9.9E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 308 318 9.9E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 385 404 9.9E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 327 334 9.9E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 Gene3D G3DSA:2.40.30.10 273 375 4.8E-23 T 29-03-2018 CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 528 593 5.1E-12 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 SUPERFAMILY SSF63380 270 378 2.38E-27 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 Gene3D G3DSA:3.40.50.80 376 503 1.0E-26 T 29-03-2018 CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 Gene3D G3DSA:2.40.33.20 1 272 8.7E-50 T 29-03-2018 CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 Pfam PF03476 MOSC N-terminal beta barrel domain 2 115 2.8E-23 T 29-03-2018 IPR005303 MOSC, N-terminal beta barrel CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 Pfam PF00970 Oxidoreductase FAD-binding domain 283 377 5.1E-13 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 SUPERFAMILY SSF54292 496 600 2.75E-25 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 SUPERFAMILY SSF141673 4 131 1.7E-29 T 29-03-2018 CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 Pfam PF00175 Oxidoreductase NAD-binding domain 386 486 1.6E-12 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 551 559 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CVS42_RS14040 99e6b9efa2d0d32d45c1f3006cd227d2 600 Gene3D G3DSA:3.10.20.30 504 600 1.8E-21 T 29-03-2018 IPR012675 Beta-grasp domain CVS42_RS08165 4e5159b3236370e08c78a509c7d6d3ce 193 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CVS42_RS08165 4e5159b3236370e08c78a509c7d6d3ce 193 Pfam PF00239 Resolvase, N terminal domain 4 135 5.6E-42 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CVS42_RS08165 4e5159b3236370e08c78a509c7d6d3ce 193 SUPERFAMILY SSF46689 131 190 2.39E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS08165 4e5159b3236370e08c78a509c7d6d3ce 193 SUPERFAMILY SSF53041 1 135 2.22E-42 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CVS42_RS08165 4e5159b3236370e08c78a509c7d6d3ce 193 Gene3D G3DSA:3.40.50.1390 1 103 4.5E-32 T 29-03-2018 CVS42_RS08165 4e5159b3236370e08c78a509c7d6d3ce 193 Gene3D G3DSA:1.10.10.60 135 167 1.4E-11 T 29-03-2018 CVS42_RS08165 4e5159b3236370e08c78a509c7d6d3ce 193 Gene3D G3DSA:1.20.5.40 104 133 3.6E-16 T 29-03-2018 CVS42_RS08165 4e5159b3236370e08c78a509c7d6d3ce 193 Pfam PF02796 Helix-turn-helix domain of resolvase 137 178 1.2E-7 T 29-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CVS42_RS08165 4e5159b3236370e08c78a509c7d6d3ce 193 SMART SM00857 3 135 4.6E-52 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CVS42_RS08165 4e5159b3236370e08c78a509c7d6d3ce 193 ProSitePatterns PS00398 Site-specific recombinases signature 2. 54 66 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CVS42_RS08165 4e5159b3236370e08c78a509c7d6d3ce 193 Gene3D G3DSA:1.10.260.40 168 193 4.2E-4 T 29-03-2018 CVS42_RS03430 6c8db3bd834b5423653f992575709ca4 505 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 1.2E-122 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CVS42_RS03430 6c8db3bd834b5423653f992575709ca4 505 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CVS42_RS03430 6c8db3bd834b5423653f992575709ca4 505 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CVS42_RS03430 6c8db3bd834b5423653f992575709ca4 505 Pfam PF00474 Sodium:solute symporter family 35 437 2.7E-137 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CVS42_RS03430 6c8db3bd834b5423653f992575709ca4 505 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 9.7E-226 T 29-03-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 CVS42_RS13375 f87ed8d57713ec482dc66137256ed7ff 131 Gene3D G3DSA:3.10.50.30 40 131 5.5E-26 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CVS42_RS13375 f87ed8d57713ec482dc66137256ed7ff 131 PIRSF PIRSF006092 12 123 3.9E-26 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CVS42_RS13375 f87ed8d57713ec482dc66137256ed7ff 131 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 45 120 5.0E-22 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CVS42_RS13375 f87ed8d57713ec482dc66137256ed7ff 131 Gene3D G3DSA:1.10.286.20 3 38 6.5E-8 T 29-03-2018 CVS42_RS13375 f87ed8d57713ec482dc66137256ed7ff 131 Pfam PF14760 Rnk N-terminus 4 38 8.6E-9 T 29-03-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain CVS42_RS13375 f87ed8d57713ec482dc66137256ed7ff 131 SUPERFAMILY SSF54534 44 122 8.63E-20 T 29-03-2018 CVS42_RS18065 adcd5e5c60b440160f5b55427de7ecc6 112 PRINTS PR00340 P-II protein signature 23 41 3.7E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CVS42_RS18065 adcd5e5c60b440160f5b55427de7ecc6 112 PRINTS PR00340 P-II protein signature 83 103 3.7E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CVS42_RS18065 adcd5e5c60b440160f5b55427de7ecc6 112 PRINTS PR00340 P-II protein signature 2 17 3.7E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CVS42_RS18065 adcd5e5c60b440160f5b55427de7ecc6 112 PRINTS PR00340 P-II protein signature 52 75 3.7E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CVS42_RS18065 adcd5e5c60b440160f5b55427de7ecc6 112 SUPERFAMILY SSF54913 1 112 6.35E-47 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CVS42_RS18065 adcd5e5c60b440160f5b55427de7ecc6 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.3E-45 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CVS42_RS18065 adcd5e5c60b440160f5b55427de7ecc6 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 29-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CVS42_RS18065 adcd5e5c60b440160f5b55427de7ecc6 112 Gene3D G3DSA:3.30.70.120 1 108 3.2E-51 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CVS42_RS18065 adcd5e5c60b440160f5b55427de7ecc6 112 PIRSF PIRSF039144 1 112 1.6E-57 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CVS42_RS18065 adcd5e5c60b440160f5b55427de7ecc6 112 SMART SM00938 4 105 1.5E-69 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CVS42_RS18065 adcd5e5c60b440160f5b55427de7ecc6 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 29-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CVS42_RS20300 3e9227fddf262bf5bc732a0722208751 325 Gene3D G3DSA:1.25.40.10 110 192 2.0E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS20300 3e9227fddf262bf5bc732a0722208751 325 Gene3D G3DSA:1.25.40.10 193 219 9.1E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS20300 3e9227fddf262bf5bc732a0722208751 325 SUPERFAMILY SSF48452 145 303 1.11E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS20300 3e9227fddf262bf5bc732a0722208751 325 Pfam PF13432 Tetratricopeptide repeat 251 303 8.5E-6 T 29-03-2018 CVS42_RS20300 3e9227fddf262bf5bc732a0722208751 325 Pfam PF14559 Tetratricopeptide repeat 184 246 1.3E-8 T 29-03-2018 CVS42_RS20300 3e9227fddf262bf5bc732a0722208751 325 Gene3D G3DSA:1.25.40.10 220 324 1.3E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS15945 1cae218fd8fab019233998027869fd8b 322 Gene3D G3DSA:1.10.10.10 2 90 1.8E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS15945 1cae218fd8fab019233998027869fd8b 322 Gene3D G3DSA:3.40.190.10 195 279 1.9E-10 T 29-03-2018 CVS42_RS15945 1cae218fd8fab019233998027869fd8b 322 SUPERFAMILY SSF53850 97 312 5.02E-27 T 29-03-2018 CVS42_RS15945 1cae218fd8fab019233998027869fd8b 322 Pfam PF03466 LysR substrate binding domain 97 312 7.7E-17 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS15945 1cae218fd8fab019233998027869fd8b 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 64 3.2E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS15945 1cae218fd8fab019233998027869fd8b 322 SUPERFAMILY SSF46785 7 86 1.29E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS15945 1cae218fd8fab019233998027869fd8b 322 Gene3D G3DSA:3.40.190.10 93 194 5.0E-8 T 29-03-2018 CVS42_RS06415 e6dc8a8a0ab4f3a7640e6484dbfda1c8 174 Pfam PF01967 MoaC family 24 159 5.7E-56 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CVS42_RS06415 e6dc8a8a0ab4f3a7640e6484dbfda1c8 174 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 13 161 1.6E-69 T 29-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 CVS42_RS06415 e6dc8a8a0ab4f3a7640e6484dbfda1c8 174 SUPERFAMILY SSF55040 20 164 1.06E-61 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CVS42_RS06415 e6dc8a8a0ab4f3a7640e6484dbfda1c8 174 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 11 167 36.681 T 29-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 CVS42_RS06415 e6dc8a8a0ab4f3a7640e6484dbfda1c8 174 Gene3D G3DSA:3.30.70.640 11 167 1.9E-70 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CVS42_RS18290 218036fa3930161b4afbbd7786b144ce 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 1.0E-21 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CVS42_RS18290 218036fa3930161b4afbbd7786b144ce 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 9 150 6.1E-45 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CVS42_RS18290 218036fa3930161b4afbbd7786b144ce 156 SUPERFAMILY SSF46785 3 77 4.08E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18290 218036fa3930161b4afbbd7786b144ce 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 3.0E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CVS42_RS18290 218036fa3930161b4afbbd7786b144ce 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 3.0E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CVS42_RS18290 218036fa3930161b4afbbd7786b144ce 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 3.0E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CVS42_RS18290 218036fa3930161b4afbbd7786b144ce 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 3.0E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CVS42_RS18290 218036fa3930161b4afbbd7786b144ce 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 60.552 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CVS42_RS18290 218036fa3930161b4afbbd7786b144ce 156 Gene3D G3DSA:3.30.1360.40 76 151 3.3E-28 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CVS42_RS18290 218036fa3930161b4afbbd7786b144ce 156 Gene3D G3DSA:1.10.10.10 8 69 5.6E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18290 218036fa3930161b4afbbd7786b144ce 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 73 1.3E-21 T 29-03-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 CVS42_RS18290 218036fa3930161b4afbbd7786b144ce 156 SUPERFAMILY SSF55252 82 145 1.57E-20 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CVS42_RS18290 218036fa3930161b4afbbd7786b144ce 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 145 2.8E-24 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 Pfam PF03572 Peptidase family S41 863 1024 7.3E-18 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 Pfam PF14684 Tricorn protease C1 domain 678 740 4.5E-18 T 29-03-2018 IPR028204 Tricorn protease C1 domain CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 PIRSF PIRSF036421 563 1055 1.7E-86 T 29-03-2018 IPR012393 Tricorn protease GO:0008236 CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 PIRSF PIRSF036421 19 539 7.1E-68 T 29-03-2018 IPR012393 Tricorn protease GO:0008236 CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 Gene3D G3DSA:3.30.750.44 682 741 4.8E-15 T 29-03-2018 CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 Gene3D G3DSA:2.30.42.10 752 843 1.4E-10 T 29-03-2018 CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 SUPERFAMILY SSF52096 672 750 2.98E-50 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 SUPERFAMILY SSF52096 836 1050 2.98E-50 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 Gene3D G3DSA:2.130.10.10 422 681 2.5E-13 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 SUPERFAMILY SSF69304 32 304 1.96E-35 T 29-03-2018 CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 SUPERFAMILY SSF50156 764 837 4.39E-8 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 Gene3D G3DSA:2.140.10.30 144 291 4.7E-11 T 29-03-2018 CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 Gene3D G3DSA:2.140.10.30 292 421 3.1E-10 T 29-03-2018 CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 Gene3D G3DSA:3.90.226.10 844 1045 5.1E-29 T 29-03-2018 CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 SUPERFAMILY SSF50969 207 517 9.42E-26 T 29-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 Gene3D G3DSA:2.140.10.30 18 143 8.1E-20 T 29-03-2018 CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 SMART SM00245 836 1025 2.2E-4 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 Pfam PF07676 WD40-like Beta Propeller Repeat 73 91 0.0051 T 29-03-2018 IPR011659 WD40-like Beta Propeller CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 Pfam PF07676 WD40-like Beta Propeller Repeat 221 246 0.0013 T 29-03-2018 IPR011659 WD40-like Beta Propeller CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 Pfam PF07676 WD40-like Beta Propeller Repeat 32 48 8.1E-4 T 29-03-2018 IPR011659 WD40-like Beta Propeller CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 Pfam PF07676 WD40-like Beta Propeller Repeat 414 430 0.086 T 29-03-2018 IPR011659 WD40-like Beta Propeller CVS42_RS18510 5c269301083c09291aeb669abbb63024 1055 Pfam PF07676 WD40-like Beta Propeller Repeat 500 524 0.047 T 29-03-2018 IPR011659 WD40-like Beta Propeller CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 Pfam PF03725 3' exoribonuclease family, domain 2 146 208 2.5E-12 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 Pfam PF03725 3' exoribonuclease family, domain 2 459 526 1.2E-4 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 Pfam PF01138 3' exoribonuclease family, domain 1 323 455 4.1E-22 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 1.3E-19 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 SUPERFAMILY SSF54211 3 143 1.62E-50 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 Gene3D G3DSA:3.30.230.70 315 543 9.9E-58 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 SUPERFAMILY SSF46915 237 319 1.15E-16 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 Gene3D G3DSA:3.30.230.70 13 244 9.0E-53 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 319 6.2E-20 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 Pfam PF00013 KH domain 555 612 2.1E-9 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 Gene3D G3DSA:2.40.50.140 617 695 5.3E-24 T 29-03-2018 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 692 30.191 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 SUPERFAMILY SSF54791 553 639 7.21E-22 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 PIRSF PIRSF005499 1 714 3.7E-297 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 SUPERFAMILY SSF55666 449 547 1.15E-27 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 SMART SM00322 551 616 2.3E-11 T 29-03-2018 IPR004087 K Homology domain GO:0003676 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 Gene3D G3DSA:1.10.10.400 245 314 8.7E-19 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 690 0.0 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 Gene3D G3DSA:3.30.1370.10 553 616 2.4E-13 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 SUPERFAMILY SSF50249 619 693 1.64E-20 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 Pfam PF00575 S1 RNA binding domain 618 689 1.6E-19 T 29-03-2018 IPR003029 S1 domain GO:0003676 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 SMART SM00316 619 689 2.3E-25 T 29-03-2018 IPR022967 RNA-binding domain, S1 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 SUPERFAMILY SSF55666 144 235 4.63E-30 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CVS42_RS16595 6596a2b01896c4f4eb0e1c18b5c34de9 715 SUPERFAMILY SSF54211 292 487 1.72E-46 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS15170 35c8c14b7ae954b4628e07ccdaaf8c50 617 SUPERFAMILY SSF69255 362 449 6.54E-33 T 29-03-2018 CVS42_RS15170 35c8c14b7ae954b4628e07ccdaaf8c50 617 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 9 519 8.3E-200 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CVS42_RS15170 35c8c14b7ae954b4628e07ccdaaf8c50 617 SUPERFAMILY SSF69279 14 185 1.76E-54 T 29-03-2018 CVS42_RS15170 35c8c14b7ae954b4628e07ccdaaf8c50 617 Gene3D G3DSA:3.55.50.10 98 189 1.5E-28 T 29-03-2018 CVS42_RS15170 35c8c14b7ae954b4628e07ccdaaf8c50 617 SUPERFAMILY SSF69279 189 363 5.27E-40 T 29-03-2018 CVS42_RS15170 35c8c14b7ae954b4628e07ccdaaf8c50 617 Gene3D G3DSA:2.40.50.230 368 450 2.5E-35 T 29-03-2018 IPR006531 Gp5 N-terminal CVS42_RS15170 35c8c14b7ae954b4628e07ccdaaf8c50 617 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 501 2.7E-147 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CVS42_RS15170 35c8c14b7ae954b4628e07ccdaaf8c50 617 Pfam PF05954 Phage late control gene D protein (GPD) 29 327 1.8E-84 T 29-03-2018 CVS42_RS15170 35c8c14b7ae954b4628e07ccdaaf8c50 617 SUPERFAMILY SSF69349 440 617 3.45E-42 T 29-03-2018 CVS42_RS19985 5daf5afadf94dd9ee5b6dc533bf3955a 541 Gene3D G3DSA:3.90.228.20 229 308 1.9E-28 T 29-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CVS42_RS19985 5daf5afadf94dd9ee5b6dc533bf3955a 541 Gene3D G3DSA:3.90.228.20 309 539 4.4E-92 T 29-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CVS42_RS19985 5daf5afadf94dd9ee5b6dc533bf3955a 541 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 19 539 54.886 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CVS42_RS19985 5daf5afadf94dd9ee5b6dc533bf3955a 541 Gene3D G3DSA:3.40.449.10 26 228 1.1E-78 T 29-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CVS42_RS19985 5daf5afadf94dd9ee5b6dc533bf3955a 541 SUPERFAMILY SSF53795 230 541 3.66E-128 T 29-03-2018 CVS42_RS19985 5daf5afadf94dd9ee5b6dc533bf3955a 541 PIRSF PIRSF006294 6 541 4.8E-227 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CVS42_RS19985 5daf5afadf94dd9ee5b6dc533bf3955a 541 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 29-03-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CVS42_RS19985 5daf5afadf94dd9ee5b6dc533bf3955a 541 SUPERFAMILY SSF68923 12 228 2.44E-89 T 29-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CVS42_RS19985 5daf5afadf94dd9ee5b6dc533bf3955a 541 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 13 541 1.3E-278 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CVS42_RS19985 5daf5afadf94dd9ee5b6dc533bf3955a 541 Pfam PF01293 Phosphoenolpyruvate carboxykinase 25 491 4.7E-211 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CVS42_RS04745 34d2170cc2910729e03cc24cdb0fd028 823 Pfam PF17092 Penicillin-binding protein OB-like domain 317 426 8.6E-29 T 29-03-2018 IPR031376 Penicillin-binding protein, OB-like domain CVS42_RS04745 34d2170cc2910729e03cc24cdb0fd028 823 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 66 751 1.9E-161 T 29-03-2018 CVS42_RS04745 34d2170cc2910729e03cc24cdb0fd028 823 Pfam PF00912 Transglycosylase 56 230 8.2E-61 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CVS42_RS04745 34d2170cc2910729e03cc24cdb0fd028 823 SUPERFAMILY SSF53955 44 258 3.94E-79 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS04745 34d2170cc2910729e03cc24cdb0fd028 823 Gene3D G3DSA:3.40.710.10 249 803 2.8E-109 T 29-03-2018 CVS42_RS04745 34d2170cc2910729e03cc24cdb0fd028 823 Gene3D G3DSA:1.10.3810.10 48 247 7.1E-79 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CVS42_RS04745 34d2170cc2910729e03cc24cdb0fd028 823 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 601 2.3E-19 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CVS42_RS04745 34d2170cc2910729e03cc24cdb0fd028 823 SUPERFAMILY SSF56601 650 797 4.73E-111 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CVS42_RS04745 34d2170cc2910729e03cc24cdb0fd028 823 SUPERFAMILY SSF56601 423 611 4.73E-111 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CVS42_RS04745 34d2170cc2910729e03cc24cdb0fd028 823 SUPERFAMILY SSF56601 212 234 4.73E-111 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CVS42_RS04745 34d2170cc2910729e03cc24cdb0fd028 823 SUPERFAMILY SSF56601 263 314 4.73E-111 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CVS42_RS05805 ccbe9f29287e076028fbd3b852fe9e68 93 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 1 90 2.0E-44 T 29-03-2018 IPR015144 Type III secretion system effector delivery regulator TyeA CVS42_RS05805 ccbe9f29287e076028fbd3b852fe9e68 93 SUPERFAMILY SSF140591 2 90 2.63E-28 T 29-03-2018 CVS42_RS05805 ccbe9f29287e076028fbd3b852fe9e68 93 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 4 84 9.7E-26 T 29-03-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related CVS42_RS05805 ccbe9f29287e076028fbd3b852fe9e68 93 Pfam PF09059 TyeA 6 86 2.2E-29 T 29-03-2018 IPR015144 Type III secretion system effector delivery regulator TyeA CVS42_RS21630 3dcb2d164d3d03c53c3b10f83f88c132 278 Gene3D G3DSA:3.30.70.100 176 269 2.3E-29 T 29-03-2018 CVS42_RS21630 3dcb2d164d3d03c53c3b10f83f88c132 278 Pfam PF00924 Mechanosensitive ion channel 67 264 2.0E-56 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CVS42_RS21630 3dcb2d164d3d03c53c3b10f83f88c132 278 Gene3D G3DSA:2.30.30.60 127 175 1.7E-13 T 29-03-2018 CVS42_RS21630 3dcb2d164d3d03c53c3b10f83f88c132 278 SUPERFAMILY SSF50182 110 175 1.05E-16 T 29-03-2018 IPR010920 LSM domain CVS42_RS21630 3dcb2d164d3d03c53c3b10f83f88c132 278 Pfam PF05552 Conserved TM helix 11 60 7.8E-13 T 29-03-2018 IPR008910 Conserved TM helix CVS42_RS21630 3dcb2d164d3d03c53c3b10f83f88c132 278 SUPERFAMILY SSF82689 176 275 4.58E-34 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CVS42_RS21630 3dcb2d164d3d03c53c3b10f83f88c132 278 SUPERFAMILY SSF82861 23 108 8.63E-17 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CVS42_RS11450 a0b8db12bc149222a2aca9bd68238fd9 344 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 42.572 T 29-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CVS42_RS11450 a0b8db12bc149222a2aca9bd68238fd9 344 Gene3D G3DSA:3.30.540.10 9 202 2.2E-65 T 29-03-2018 CVS42_RS11450 a0b8db12bc149222a2aca9bd68238fd9 344 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 29-03-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CVS42_RS11450 a0b8db12bc149222a2aca9bd68238fd9 344 PIRSF PIRSF000904 1 337 1.4E-125 T 29-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CVS42_RS11450 a0b8db12bc149222a2aca9bd68238fd9 344 SUPERFAMILY SSF56655 2 331 4.09E-116 T 29-03-2018 CVS42_RS11450 a0b8db12bc149222a2aca9bd68238fd9 344 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 197 7.8E-75 T 29-03-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CVS42_RS11450 a0b8db12bc149222a2aca9bd68238fd9 344 PIRSF PIRSF500210 1 336 2.4E-128 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CVS42_RS11450 a0b8db12bc149222a2aca9bd68238fd9 344 Gene3D G3DSA:3.40.190.80 203 334 2.9E-58 T 29-03-2018 CVS42_RS11450 a0b8db12bc149222a2aca9bd68238fd9 344 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 1.1E-76 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CVS42_RS11450 a0b8db12bc149222a2aca9bd68238fd9 344 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 1.1E-76 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CVS42_RS11450 a0b8db12bc149222a2aca9bd68238fd9 344 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 1.1E-76 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CVS42_RS11450 a0b8db12bc149222a2aca9bd68238fd9 344 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 1.1E-76 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CVS42_RS11450 a0b8db12bc149222a2aca9bd68238fd9 344 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 1.1E-76 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CVS42_RS11450 a0b8db12bc149222a2aca9bd68238fd9 344 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 1.1E-76 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CVS42_RS08325 34358d20c691574a74eb7a07bb7d63c0 488 PIRSF PIRSF019381 23 488 1.5E-183 T 29-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein CVS42_RS08325 34358d20c691574a74eb7a07bb7d63c0 488 Pfam PF04317 YcjX-like family, DUF463 49 487 3.3E-174 T 29-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein CVS42_RS08325 34358d20c691574a74eb7a07bb7d63c0 488 Gene3D G3DSA:3.40.50.300 8 389 1.9E-15 T 29-03-2018 CVS42_RS22185 2b54aed911e999ace9cc08ff022bfa84 548 SMART SM00382 349 522 1.9E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS22185 2b54aed911e999ace9cc08ff022bfa84 548 SUPERFAMILY SSF90123 5 299 2.62E-28 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CVS42_RS22185 2b54aed911e999ace9cc08ff022bfa84 548 Pfam PF00005 ABC transporter 343 473 4.6E-23 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS22185 2b54aed911e999ace9cc08ff022bfa84 548 Gene3D G3DSA:3.40.50.300 321 540 2.5E-39 T 29-03-2018 CVS42_RS22185 2b54aed911e999ace9cc08ff022bfa84 548 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 2 524 1.6E-112 T 29-03-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 CVS42_RS22185 2b54aed911e999ace9cc08ff022bfa84 548 Gene3D G3DSA:1.20.1560.10 2 312 2.8E-25 T 29-03-2018 CVS42_RS22185 2b54aed911e999ace9cc08ff022bfa84 548 ProSitePatterns PS00211 ABC transporters family signature. 446 460 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS22185 2b54aed911e999ace9cc08ff022bfa84 548 SUPERFAMILY SSF52540 319 528 5.04E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS16340 ada72b6b743cbd72d9854b8567bb3cbc 244 SUPERFAMILY SSF51735 3 233 6.8E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS16340 ada72b6b743cbd72d9854b8567bb3cbc 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 1.2E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS16340 ada72b6b743cbd72d9854b8567bb3cbc 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.2E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS16340 ada72b6b743cbd72d9854b8567bb3cbc 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 1.2E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS16340 ada72b6b743cbd72d9854b8567bb3cbc 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 1.2E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS16340 ada72b6b743cbd72d9854b8567bb3cbc 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 127 155 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CVS42_RS16340 ada72b6b743cbd72d9854b8567bb3cbc 244 Pfam PF00106 short chain dehydrogenase 5 180 1.9E-32 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS16340 ada72b6b743cbd72d9854b8567bb3cbc 244 Gene3D G3DSA:3.40.50.720 2 235 2.0E-46 T 29-03-2018 CVS42_RS05180 67746844e28d0044a4e5e2547c16b137 339 SMART SM00382 35 233 4.3E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS05180 67746844e28d0044a4e5e2547c16b137 339 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 319 2.4E-21 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CVS42_RS05180 67746844e28d0044a4e5e2547c16b137 339 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 5.2E-16 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CVS42_RS05180 67746844e28d0044a4e5e2547c16b137 339 SUPERFAMILY SSF52540 6 254 6.17E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS05180 67746844e28d0044a4e5e2547c16b137 339 Gene3D G3DSA:3.40.50.300 3 334 9.0E-73 T 29-03-2018 CVS42_RS05180 67746844e28d0044a4e5e2547c16b137 339 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS05180 67746844e28d0044a4e5e2547c16b137 339 Pfam PF00005 ABC transporter 27 183 2.5E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS00760 78f6d3406fa35752abfd51bbbb88aa0d 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CVS42_RS00760 78f6d3406fa35752abfd51bbbb88aa0d 329 Gene3D G3DSA:3.40.50.720 2 115 8.2E-28 T 29-03-2018 CVS42_RS00760 78f6d3406fa35752abfd51bbbb88aa0d 329 Gene3D G3DSA:3.40.50.720 116 300 2.5E-50 T 29-03-2018 CVS42_RS00760 78f6d3406fa35752abfd51bbbb88aa0d 329 SUPERFAMILY SSF52283 2 135 1.23E-41 T 29-03-2018 CVS42_RS00760 78f6d3406fa35752abfd51bbbb88aa0d 329 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CVS42_RS00760 78f6d3406fa35752abfd51bbbb88aa0d 329 SUPERFAMILY SSF51735 102 298 1.03E-54 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS00760 78f6d3406fa35752abfd51bbbb88aa0d 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 3 328 5.7E-32 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CVS42_RS00760 78f6d3406fa35752abfd51bbbb88aa0d 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 1.4E-52 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CVS42_RS08190 6e3654290907fed76b5e368b958b1529 133 SUPERFAMILY SSF81273 90 133 1.88E-9 T 29-03-2018 CVS42_RS08190 6e3654290907fed76b5e368b958b1529 133 Pfam PF00816 H-NS histone family 41 126 1.7E-18 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CVS42_RS08190 6e3654290907fed76b5e368b958b1529 133 PIRSF PIRSF002096 1 133 3.1E-52 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CVS42_RS08190 6e3654290907fed76b5e368b958b1529 133 SUPERFAMILY SSF81273 2 58 1.55E-15 T 29-03-2018 CVS42_RS08190 6e3654290907fed76b5e368b958b1529 133 Gene3D G3DSA:4.10.430.10 93 133 6.0E-18 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CVS42_RS08190 6e3654290907fed76b5e368b958b1529 133 Gene3D G3DSA:1.10.287.1050 1 57 2.6E-21 T 29-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 CVS42_RS08190 6e3654290907fed76b5e368b958b1529 133 SMART SM00528 87 133 3.3E-20 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CVS42_RS15840 f94b71e882a2eb7dfab092d3234349e6 264 SUPERFAMILY SSF117856 33 263 7.32E-81 T 29-03-2018 CVS42_RS15840 f94b71e882a2eb7dfab092d3234349e6 264 Gene3D G3DSA:3.30.1330.80 122 228 3.3E-39 T 29-03-2018 CVS42_RS15840 f94b71e882a2eb7dfab092d3234349e6 264 PIRSF PIRSF001332 16 264 1.2E-87 T 29-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 CVS42_RS15840 f94b71e882a2eb7dfab092d3234349e6 264 Pfam PF03306 Alpha-acetolactate decarboxylase 34 251 3.3E-80 T 29-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 CVS42_RS15840 f94b71e882a2eb7dfab092d3234349e6 264 Gene3D G3DSA:3.30.1330.80 32 121 5.4E-34 T 29-03-2018 CVS42_RS15840 f94b71e882a2eb7dfab092d3234349e6 264 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 33 263 2.6E-84 T 29-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 CVS42_RS13380 be1d85ea3face09d0bef8d19aeab25dd 196 SUPERFAMILY SSF46894 130 193 1.02E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS13380 be1d85ea3face09d0bef8d19aeab25dd 196 Gene3D G3DSA:1.10.10.10 124 195 7.9E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS13380 be1d85ea3face09d0bef8d19aeab25dd 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 5.0E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS13380 be1d85ea3face09d0bef8d19aeab25dd 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 5.0E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS13380 be1d85ea3face09d0bef8d19aeab25dd 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 5.0E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS13380 be1d85ea3face09d0bef8d19aeab25dd 196 Pfam PF00072 Response regulator receiver domain 4 113 2.9E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS13380 be1d85ea3face09d0bef8d19aeab25dd 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 191 7.6E-22 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS13380 be1d85ea3face09d0bef8d19aeab25dd 196 Gene3D G3DSA:3.40.50.2300 1 123 6.4E-27 T 29-03-2018 CVS42_RS13380 be1d85ea3face09d0bef8d19aeab25dd 196 SMART SM00448 2 112 2.3E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS13380 be1d85ea3face09d0bef8d19aeab25dd 196 SUPERFAMILY SSF52172 1 129 4.7E-26 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS13380 be1d85ea3face09d0bef8d19aeab25dd 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS13380 be1d85ea3face09d0bef8d19aeab25dd 196 SMART SM00421 135 192 4.1E-23 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS17255 40d8f0c5ce14ccb1b63ec7c1b1ae19b9 383 Pfam PF12221 Bacterial membrane protein N terminal 1 46 1.8E-17 T 29-03-2018 IPR020980 Menbrane protein HflK, N-terminal CVS42_RS17255 40d8f0c5ce14ccb1b63ec7c1b1ae19b9 383 SUPERFAMILY SSF117892 104 236 7.32E-21 T 29-03-2018 IPR001107 Band 7 domain CVS42_RS17255 40d8f0c5ce14ccb1b63ec7c1b1ae19b9 383 SMART SM00244 71 231 1.6E-39 T 29-03-2018 IPR001107 Band 7 domain CVS42_RS17255 40d8f0c5ce14ccb1b63ec7c1b1ae19b9 383 PRINTS PR00721 Stomatin signature 125 146 7.4E-5 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CVS42_RS17255 40d8f0c5ce14ccb1b63ec7c1b1ae19b9 383 PRINTS PR00721 Stomatin signature 181 204 7.4E-5 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CVS42_RS17255 40d8f0c5ce14ccb1b63ec7c1b1ae19b9 383 PRINTS PR00721 Stomatin signature 78 100 7.4E-5 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CVS42_RS17255 40d8f0c5ce14ccb1b63ec7c1b1ae19b9 383 Pfam PF01145 SPFH domain / Band 7 family 75 246 3.1E-22 T 29-03-2018 IPR001107 Band 7 domain CVS42_RS17255 40d8f0c5ce14ccb1b63ec7c1b1ae19b9 383 TIGRFAM TIGR01933 hflK: HflK protein 73 334 1.0E-110 T 29-03-2018 IPR010201 HflK GO:0016021 CVS42_RS15025 08f05c2516e5b569dafeb0201684a635 481 Gene3D G3DSA:1.10.3210.10 102 478 1.3E-48 T 29-03-2018 CVS42_RS15025 08f05c2516e5b569dafeb0201684a635 481 SMART SM00471 287 437 1.8E-8 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS15025 08f05c2516e5b569dafeb0201684a635 481 SUPERFAMILY SSF109604 267 465 6.28E-36 T 29-03-2018 CVS42_RS15025 08f05c2516e5b569dafeb0201684a635 481 SMART SM00304 215 267 5.6E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS15025 08f05c2516e5b569dafeb0201684a635 481 Pfam PF13487 HD domain 350 419 4.0E-18 T 29-03-2018 CVS42_RS15025 08f05c2516e5b569dafeb0201684a635 481 SUPERFAMILY SSF158472 221 264 2.35E-7 T 29-03-2018 CVS42_RS10085 3acf19dce9c0c30837793b7c2368f4ef 268 Pfam PF01063 Amino-transferase class IV 23 246 5.0E-46 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CVS42_RS10085 3acf19dce9c0c30837793b7c2368f4ef 268 Gene3D G3DSA:3.30.470.10 6 110 1.4E-23 T 29-03-2018 CVS42_RS10085 3acf19dce9c0c30837793b7c2368f4ef 268 Gene3D G3DSA:3.20.10.10 111 268 9.7E-33 T 29-03-2018 CVS42_RS10085 3acf19dce9c0c30837793b7c2368f4ef 268 SUPERFAMILY SSF56752 3 253 5.49E-65 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CVS42_RS10085 3acf19dce9c0c30837793b7c2368f4ef 268 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 2 262 3.3E-102 T 29-03-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 CVS42_RS03545 2314c900752cc685e13308349f3a1810 489 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 322 469 4.8E-28 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS03545 2314c900752cc685e13308349f3a1810 489 SUPERFAMILY SSF55073 329 473 6.36E-32 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS03545 2314c900752cc685e13308349f3a1810 489 Pfam PF00990 Diguanylate cyclase, GGDEF domain 324 467 3.3E-30 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS03545 2314c900752cc685e13308349f3a1810 489 Gene3D G3DSA:3.30.70.270 318 478 7.0E-36 T 29-03-2018 CVS42_RS03545 2314c900752cc685e13308349f3a1810 489 SMART SM00267 313 472 8.5E-38 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS09515 a6019a5ed9fbedfc30b6a12ed3f7f926 288 Pfam PF05235 CHAD domain 18 218 1.9E-17 T 29-03-2018 IPR007899 CHAD domain CVS42_RS09515 a6019a5ed9fbedfc30b6a12ed3f7f926 288 SMART SM00880 12 250 2.6E-8 T 29-03-2018 IPR007899 CHAD domain CVS42_RS17935 a5e8be9434b9fc3628c5ef188b402ced 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 7.6E-53 T 29-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS17935 a5e8be9434b9fc3628c5ef188b402ced 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.2E-21 T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17935 a5e8be9434b9fc3628c5ef188b402ced 148 Gene3D G3DSA:3.40.5.10 1 49 6.3E-22 T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17935 a5e8be9434b9fc3628c5ef188b402ced 148 Gene3D G3DSA:3.10.430.100 63 147 4.7E-25 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal CVS42_RS17935 a5e8be9434b9fc3628c5ef188b402ced 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 24.74 T 29-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS17935 a5e8be9434b9fc3628c5ef188b402ced 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17935 a5e8be9434b9fc3628c5ef188b402ced 148 SUPERFAMILY SSF55658 1 57 5.41E-18 T 29-03-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CVS42_RS17935 a5e8be9434b9fc3628c5ef188b402ced 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 8.4E-25 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal CVS42_RS17935 a5e8be9434b9fc3628c5ef188b402ced 148 SUPERFAMILY SSF55653 61 147 3.53E-23 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal CVS42_RS10005 d64eeec7060ec15823a593c7b69f583f 476 SUPERFAMILY SSF52777 17 144 1.22E-13 T 29-03-2018 CVS42_RS10005 d64eeec7060ec15823a593c7b69f583f 476 Pfam PF06974 Protein of unknown function (DUF1298) 313 454 1.4E-38 T 29-03-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 CVS42_RS10005 d64eeec7060ec15823a593c7b69f583f 476 Gene3D G3DSA:3.30.559.10 7 178 4.0E-13 T 29-03-2018 CVS42_RS10005 d64eeec7060ec15823a593c7b69f583f 476 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 8 270 2.3E-35 T 29-03-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 CVS42_RS10005 d64eeec7060ec15823a593c7b69f583f 476 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 8 455 1.9E-113 T 29-03-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 CVS42_RS10005 d64eeec7060ec15823a593c7b69f583f 476 SUPERFAMILY SSF52777 256 447 7.78E-6 T 29-03-2018 CVS42_RS17280 16e60cb02923fdda7b5103ac3c34a69e 573 Gene3D G3DSA:3.40.630.40 144 377 4.7E-58 T 29-03-2018 CVS42_RS17280 16e60cb02923fdda7b5103ac3c34a69e 573 Pfam PF01476 LysM domain 529 571 8.9E-12 T 29-03-2018 IPR018392 LysM domain CVS42_RS17280 16e60cb02923fdda7b5103ac3c34a69e 573 Pfam PF01476 LysM domain 465 507 1.9E-12 T 29-03-2018 IPR018392 LysM domain CVS42_RS17280 16e60cb02923fdda7b5103ac3c34a69e 573 Pfam PF11741 AMIN domain 24 124 1.9E-21 T 29-03-2018 IPR021731 AMIN domain CVS42_RS17280 16e60cb02923fdda7b5103ac3c34a69e 573 SUPERFAMILY SSF54106 527 571 4.32E-10 T 29-03-2018 IPR018392 LysM domain CVS42_RS17280 16e60cb02923fdda7b5103ac3c34a69e 573 SMART SM00257 528 571 2.1E-14 T 29-03-2018 IPR018392 LysM domain CVS42_RS17280 16e60cb02923fdda7b5103ac3c34a69e 573 SMART SM00257 464 507 9.5E-14 T 29-03-2018 IPR018392 LysM domain CVS42_RS17280 16e60cb02923fdda7b5103ac3c34a69e 573 Gene3D G3DSA:3.10.350.10 461 522 1.8E-11 T 29-03-2018 CVS42_RS17280 16e60cb02923fdda7b5103ac3c34a69e 573 Gene3D G3DSA:3.10.350.10 523 573 2.5E-12 T 29-03-2018 CVS42_RS17280 16e60cb02923fdda7b5103ac3c34a69e 573 SUPERFAMILY SSF53187 146 243 2.01E-53 T 29-03-2018 CVS42_RS17280 16e60cb02923fdda7b5103ac3c34a69e 573 SUPERFAMILY SSF53187 295 371 2.01E-53 T 29-03-2018 CVS42_RS17280 16e60cb02923fdda7b5103ac3c34a69e 573 SMART SM00646 209 368 7.3E-63 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CVS42_RS17280 16e60cb02923fdda7b5103ac3c34a69e 573 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 149 368 9.0E-50 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CVS42_RS17280 16e60cb02923fdda7b5103ac3c34a69e 573 SUPERFAMILY SSF54106 463 507 1.29E-9 T 29-03-2018 IPR018392 LysM domain CVS42_RS05010 88048dde1469f41efc6e9ff662a7f313 266 Gene3D G3DSA:1.25.40.10 178 259 4.1E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS05010 88048dde1469f41efc6e9ff662a7f313 266 Pfam PF13369 Transglutaminase-like superfamily 51 182 3.0E-38 T 29-03-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CVS42_RS05010 88048dde1469f41efc6e9ff662a7f313 266 SUPERFAMILY SSF48452 187 248 1.52E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS05010 88048dde1469f41efc6e9ff662a7f313 266 Pfam PF13371 Tetratricopeptide repeat 185 256 4.1E-25 T 29-03-2018 CVS42_RS16765 b8dff177d84384f3b77007da800f5898 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 149 367 6.2E-59 T 29-03-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 CVS42_RS16765 b8dff177d84384f3b77007da800f5898 369 Gene3D G3DSA:3.40.430.10 128 366 3.4E-64 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CVS42_RS16765 b8dff177d84384f3b77007da800f5898 369 Gene3D G3DSA:3.40.140.10 2 127 1.7E-34 T 29-03-2018 CVS42_RS16765 b8dff177d84384f3b77007da800f5898 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 102 9.4E-20 T 29-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CVS42_RS16765 b8dff177d84384f3b77007da800f5898 369 SUPERFAMILY SSF53927 6 147 4.52E-48 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CVS42_RS16765 b8dff177d84384f3b77007da800f5898 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 91 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CVS42_RS16765 b8dff177d84384f3b77007da800f5898 369 PIRSF PIRSF006769 1 369 2.8E-121 T 29-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CVS42_RS16765 b8dff177d84384f3b77007da800f5898 369 SUPERFAMILY SSF53597 149 365 3.93E-55 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CVS42_RS16765 b8dff177d84384f3b77007da800f5898 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 364 3.4E-126 T 29-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CVS42_RS16765 b8dff177d84384f3b77007da800f5898 369 Pfam PF01872 RibD C-terminal domain 150 362 3.1E-50 T 29-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CVS42_RS16075 8b0106fc0c19057d87fc7aec26913246 882 SUPERFAMILY SSF109604 419 614 1.85E-13 T 29-03-2018 CVS42_RS16075 8b0106fc0c19057d87fc7aec26913246 882 Pfam PF01909 Nucleotidyltransferase domain 57 119 3.4E-8 T 29-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CVS42_RS16075 8b0106fc0c19057d87fc7aec26913246 882 Pfam PF08335 GlnD PII-uridylyltransferase 178 316 3.9E-36 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CVS42_RS16075 8b0106fc0c19057d87fc7aec26913246 882 SUPERFAMILY SSF81301 39 167 5.65E-22 T 29-03-2018 CVS42_RS16075 8b0106fc0c19057d87fc7aec26913246 882 Pfam PF01966 HD domain 486 585 1.0E-11 T 29-03-2018 IPR006674 HD domain CVS42_RS16075 8b0106fc0c19057d87fc7aec26913246 882 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 882 338.649 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CVS42_RS16075 8b0106fc0c19057d87fc7aec26913246 882 SMART SM00471 448 595 1.8E-6 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS16075 8b0106fc0c19057d87fc7aec26913246 882 Gene3D G3DSA:3.30.70.260 683 782 1.2E-10 T 29-03-2018 CVS42_RS16075 8b0106fc0c19057d87fc7aec26913246 882 Gene3D G3DSA:3.30.460.10 38 171 2.4E-24 T 29-03-2018 CVS42_RS16075 8b0106fc0c19057d87fc7aec26913246 882 SUPERFAMILY SSF55021 690 764 4.96E-8 T 29-03-2018 CVS42_RS16075 8b0106fc0c19057d87fc7aec26913246 882 Gene3D G3DSA:1.10.3090.10 342 639 3.3E-40 T 29-03-2018 CVS42_RS16075 8b0106fc0c19057d87fc7aec26913246 882 SUPERFAMILY SSF81593 199 313 5.89E-10 T 29-03-2018 CVS42_RS16075 8b0106fc0c19057d87fc7aec26913246 882 Gene3D G3DSA:1.20.120.330 176 319 3.2E-25 T 29-03-2018 CVS42_RS16075 8b0106fc0c19057d87fc7aec26913246 882 SUPERFAMILY SSF55021 802 867 5.73E-8 T 29-03-2018 CVS42_RS16075 8b0106fc0c19057d87fc7aec26913246 882 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 33 874 9.6E-304 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CVS42_RS16075 8b0106fc0c19057d87fc7aec26913246 882 PIRSF PIRSF006288 11 880 0.0 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CVS42_RS16075 8b0106fc0c19057d87fc7aec26913246 882 Gene3D G3DSA:3.30.70.260 799 881 1.3E-9 T 29-03-2018 CVS42_RS02715 506b832937cba05887e116f1b63f86e2 210 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 2 210 5.4E-54 T 29-03-2018 IPR026387 Outer membrane protein CVS42_RS02715 506b832937cba05887e116f1b63f86e2 210 Gene3D G3DSA:2.40.160.20 20 210 5.6E-6 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS12495 c9d9997fe739f6cbc52ece928ab31d81 500 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CVS42_RS12495 c9d9997fe739f6cbc52ece928ab31d81 500 SUPERFAMILY SSF53067 6 255 8.77E-96 T 29-03-2018 CVS42_RS12495 c9d9997fe739f6cbc52ece928ab31d81 500 Gene3D G3DSA:3.30.420.40 1 248 2.6E-89 T 29-03-2018 CVS42_RS12495 c9d9997fe739f6cbc52ece928ab31d81 500 SUPERFAMILY SSF53067 255 496 1.21E-84 T 29-03-2018 CVS42_RS12495 c9d9997fe739f6cbc52ece928ab31d81 500 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 252 1.1E-86 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CVS42_RS12495 c9d9997fe739f6cbc52ece928ab31d81 500 Gene3D G3DSA:3.30.420.40 249 500 7.4E-80 T 29-03-2018 CVS42_RS12495 c9d9997fe739f6cbc52ece928ab31d81 500 Hamap MF_00186 Glycerol kinase [glpK]. 5 497 59.408 T 29-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CVS42_RS12495 c9d9997fe739f6cbc52ece928ab31d81 500 PIRSF PIRSF000538 5 500 9.2E-180 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CVS42_RS12495 c9d9997fe739f6cbc52ece928ab31d81 500 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 6 496 6.4E-229 T 29-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CVS42_RS12495 c9d9997fe739f6cbc52ece928ab31d81 500 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 137 149 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CVS42_RS12495 c9d9997fe739f6cbc52ece928ab31d81 500 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 450 1.3E-60 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CVS42_RS16460 a0e0534a51cd03547c2f34482cf61b1c 110 Gene3D G3DSA:3.30.429.10 2 109 3.8E-29 T 29-03-2018 CVS42_RS16460 a0e0534a51cd03547c2f34482cf61b1c 110 SUPERFAMILY SSF55331 1 110 1.95E-29 T 29-03-2018 IPR014347 Tautomerase/MIF superfamily CVS42_RS16460 a0e0534a51cd03547c2f34482cf61b1c 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 2.3E-26 T 29-03-2018 IPR015017 Protein of unknown function DUF1904 CVS42_RS04090 9450c42ab0189a6f4fe903af6efffdc7 185 SUPERFAMILY SSF50475 8 160 1.94E-36 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CVS42_RS04090 9450c42ab0189a6f4fe903af6efffdc7 185 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 3 169 2.6E-91 T 29-03-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain CVS42_RS04090 9450c42ab0189a6f4fe903af6efffdc7 185 PIRSF PIRSF004633 1 175 4.1E-77 T 29-03-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain CVS42_RS04090 9450c42ab0189a6f4fe903af6efffdc7 185 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 12 103 5.8E-18 T 29-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CVS42_RS04090 9450c42ab0189a6f4fe903af6efffdc7 185 Gene3D G3DSA:2.30.110.10 6 173 2.0E-28 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CVS42_RS14335 cbef8a99db899f96388baa9bc5bda8cd 294 SUPERFAMILY SSF111331 7 291 3.66E-91 T 29-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain CVS42_RS14335 cbef8a99db899f96388baa9bc5bda8cd 294 Gene3D G3DSA:2.60.200.30 142 266 2.3E-41 T 29-03-2018 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CVS42_RS14335 cbef8a99db899f96388baa9bc5bda8cd 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.845 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CVS42_RS14335 cbef8a99db899f96388baa9bc5bda8cd 294 Pfam PF01513 ATP-NAD kinase 8 273 1.1E-67 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CVS42_RS14335 cbef8a99db899f96388baa9bc5bda8cd 294 Gene3D G3DSA:3.40.50.10330 1 141 9.0E-37 T 29-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 CVS42_RS10265 6d7be375109d1b12fb933ee7b24c2bbb 456 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 106 449 4.1E-123 T 29-03-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 CVS42_RS10265 6d7be375109d1b12fb933ee7b24c2bbb 456 Gene3D G3DSA:3.60.120.10 3 455 5.0E-148 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CVS42_RS10265 6d7be375109d1b12fb933ee7b24c2bbb 456 Pfam PF00425 chorismate binding enzyme 191 445 7.5E-96 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CVS42_RS10265 6d7be375109d1b12fb933ee7b24c2bbb 456 SUPERFAMILY SSF56322 3 453 1.7E-140 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CVS42_RS10265 6d7be375109d1b12fb933ee7b24c2bbb 456 Pfam PF04715 Anthranilate synthase component I, N terminal region 15 143 1.9E-22 T 29-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CVS42_RS10265 6d7be375109d1b12fb933ee7b24c2bbb 456 PRINTS PR00095 Anthranilate synthase component I signature 307 320 1.9E-17 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CVS42_RS10265 6d7be375109d1b12fb933ee7b24c2bbb 456 PRINTS PR00095 Anthranilate synthase component I signature 402 416 1.9E-17 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CVS42_RS10265 6d7be375109d1b12fb933ee7b24c2bbb 456 PRINTS PR00095 Anthranilate synthase component I signature 293 306 1.9E-17 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CVS42_RS10265 6d7be375109d1b12fb933ee7b24c2bbb 456 PRINTS PR00095 Anthranilate synthase component I signature 387 401 1.9E-17 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CVS42_RS09070 12929531856ac15cae5950111277384a 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 390 2.0E-183 T 29-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CVS42_RS09070 12929531856ac15cae5950111277384a 392 Gene3D G3DSA:3.30.470.20 195 390 1.0E-38 T 29-03-2018 CVS42_RS09070 12929531856ac15cae5950111277384a 392 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 6 391 52.038 T 29-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CVS42_RS09070 12929531856ac15cae5950111277384a 392 Pfam PF02222 ATP-grasp domain 121 293 8.9E-56 T 29-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CVS42_RS09070 12929531856ac15cae5950111277384a 392 SUPERFAMILY SSF52440 2 110 6.62E-34 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CVS42_RS09070 12929531856ac15cae5950111277384a 392 SUPERFAMILY SSF51246 317 390 4.39E-18 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CVS42_RS09070 12929531856ac15cae5950111277384a 392 Gene3D G3DSA:3.40.50.20 2 120 2.5E-22 T 29-03-2018 CVS42_RS09070 12929531856ac15cae5950111277384a 392 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 79 5.6E-5 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CVS42_RS09070 12929531856ac15cae5950111277384a 392 Gene3D G3DSA:3.30.1490.20 127 194 6.8E-20 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CVS42_RS09070 12929531856ac15cae5950111277384a 392 SUPERFAMILY SSF56059 111 312 6.72E-57 T 29-03-2018 CVS42_RS19440 966c1ad169d758570fe74eeecab3d9d5 234 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 27 101 3.8E-23 T 29-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 CVS42_RS19440 966c1ad169d758570fe74eeecab3d9d5 234 Pfam PF13930 DNA/RNA non-specific endonuclease 145 218 7.2E-14 T 29-03-2018 CVS42_RS19440 966c1ad169d758570fe74eeecab3d9d5 234 PRINTS PR00394 RHS protein signature 46 66 6.8E-10 T 29-03-2018 IPR001826 RHS protein CVS42_RS19440 966c1ad169d758570fe74eeecab3d9d5 234 PRINTS PR00394 RHS protein signature 69 88 6.8E-10 T 29-03-2018 IPR001826 RHS protein CVS42_RS13230 14c93d0a3cf04022c1121303ab52d68a 200 Pfam PF06041 Bacterial protein of unknown function (DUF924) 8 197 6.8E-63 T 29-03-2018 IPR010323 Protein of unknown function DUF924 CVS42_RS13230 14c93d0a3cf04022c1121303ab52d68a 200 Gene3D G3DSA:1.20.58.320 1 88 4.4E-25 T 29-03-2018 CVS42_RS13230 14c93d0a3cf04022c1121303ab52d68a 200 SUPERFAMILY SSF48452 2 196 7.21E-63 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS13230 14c93d0a3cf04022c1121303ab52d68a 200 Gene3D G3DSA:1.25.40.10 89 200 3.1E-36 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS05480 f8873839f429a0217210ea9135a6856e 146 Pfam PF02050 Flagellar FliJ protein 17 139 1.4E-27 T 29-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CVS42_RS05480 f8873839f429a0217210ea9135a6856e 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 8 139 1.1E-22 T 29-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CVS42_RS10780 d196740971cc756b23a0c938ca54ef2a 371 Pfam PF00534 Glycosyl transferases group 1 195 336 3.4E-30 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CVS42_RS10780 d196740971cc756b23a0c938ca54ef2a 371 SUPERFAMILY SSF53756 17 370 2.04E-66 T 29-03-2018 CVS42_RS10780 d196740971cc756b23a0c938ca54ef2a 371 Pfam PF13439 Glycosyltransferase Family 4 26 185 2.7E-16 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CVS42_RS10780 d196740971cc756b23a0c938ca54ef2a 371 Gene3D G3DSA:3.40.50.2000 193 367 1.1E-38 T 29-03-2018 CVS42_RS10780 d196740971cc756b23a0c938ca54ef2a 371 Gene3D G3DSA:3.40.50.2000 16 192 8.3E-15 T 29-03-2018 CVS42_RS10460 18d5c084520fde9acac58ebb453dcb3d 437 Gene3D G3DSA:3.20.20.70 8 368 1.5E-32 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS10460 18d5c084520fde9acac58ebb453dcb3d 437 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 252 323 2.0E-6 T 29-03-2018 CVS42_RS10460 18d5c084520fde9acac58ebb453dcb3d 437 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 18 408 1.8E-148 T 29-03-2018 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 CVS42_RS10460 18d5c084520fde9acac58ebb453dcb3d 437 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 302 391 1.7E-17 T 29-03-2018 IPR023885 4Fe4S-binding SPASM domain CVS42_RS10460 18d5c084520fde9acac58ebb453dcb3d 437 Pfam PF13186 Iron-sulfur cluster-binding domain 303 363 8.2E-9 T 29-03-2018 IPR023885 4Fe4S-binding SPASM domain CVS42_RS10460 18d5c084520fde9acac58ebb453dcb3d 437 SUPERFAMILY SSF102114 25 372 3.27E-37 T 29-03-2018 CVS42_RS10460 18d5c084520fde9acac58ebb453dcb3d 437 Pfam PF04055 Radical SAM superfamily 25 196 1.8E-10 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS06615 929be7fed5885971866fee871a1c31a2 240 Gene3D G3DSA:1.10.530.10 38 235 3.4E-42 T 29-03-2018 CVS42_RS06615 929be7fed5885971866fee871a1c31a2 240 Pfam PF01464 Transglycosylase SLT domain 112 212 1.4E-26 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CVS42_RS06615 929be7fed5885971866fee871a1c31a2 240 SUPERFAMILY SSF53955 100 233 2.12E-44 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS11615 b213b7feb20ce97c9e052afdc8ae255a 183 Pfam PF07273 Protein of unknown function (DUF1439) 24 175 1.0E-47 T 29-03-2018 IPR010835 Protein of unknown function DUF1439 CVS42_RS18105 fc674d13d3f4636c91a2e53384f235f2 1108 Pfam PF05567 Neisseria PilC beta-propeller domain 593 920 5.3E-74 T 29-03-2018 IPR008707 PilC beta-propeller domain CVS42_RS18105 fc674d13d3f4636c91a2e53384f235f2 1108 Gene3D G3DSA:3.40.50.410 31 483 4.3E-35 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS18105 fc674d13d3f4636c91a2e53384f235f2 1108 Gene3D G3DSA:2.130.10.10 697 868 6.8E-5 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CVS42_RS18105 fc674d13d3f4636c91a2e53384f235f2 1108 SUPERFAMILY SSF50998 639 835 1.53E-9 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CVS42_RS18105 fc674d13d3f4636c91a2e53384f235f2 1108 SUPERFAMILY SSF50998 872 890 1.53E-9 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CVS42_RS18105 fc674d13d3f4636c91a2e53384f235f2 1108 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1028 1040 - T 29-03-2018 IPR018247 EF-Hand 1, calcium-binding site CVS42_RS05195 10cff3beac9595db39f6f15ebcf27fd0 561 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 462 1.9E-73 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CVS42_RS05195 10cff3beac9595db39f6f15ebcf27fd0 561 SUPERFAMILY SSF53850 29 533 7.06E-104 T 29-03-2018 CVS42_RS05195 10cff3beac9595db39f6f15ebcf27fd0 561 Gene3D G3DSA:3.10.105.10 289 518 3.7E-50 T 29-03-2018 CVS42_RS05195 10cff3beac9595db39f6f15ebcf27fd0 561 Gene3D G3DSA:3.40.190.10 188 288 1.0E-11 T 29-03-2018 CVS42_RS05195 10cff3beac9595db39f6f15ebcf27fd0 561 PIRSF PIRSF002741 3 536 1.9E-68 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CVS42_RS05195 10cff3beac9595db39f6f15ebcf27fd0 561 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 85 107 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site CVS42_RS05195 10cff3beac9595db39f6f15ebcf27fd0 561 Gene3D G3DSA:3.90.76.10 46 187 5.3E-29 T 29-03-2018 CVS42_RS00415 6af1ff2975b7b25c8d184b14a51c5c6a 165 Gene3D G3DSA:3.90.1010.10 18 165 6.2E-46 T 29-03-2018 CVS42_RS00415 6af1ff2975b7b25c8d184b14a51c5c6a 165 Pfam PF02657 Fe-S metabolism associated domain 42 162 8.5E-43 T 29-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like CVS42_RS00415 6af1ff2975b7b25c8d184b14a51c5c6a 165 SUPERFAMILY SSF82649 29 164 1.15E-45 T 29-03-2018 CVS42_RS18795 ec477f819d24c14474408de008c018b6 360 SUPERFAMILY SSF53756 3 353 1.46E-121 T 29-03-2018 CVS42_RS18795 ec477f819d24c14474408de008c018b6 360 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 142 4.2E-42 T 29-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CVS42_RS18795 ec477f819d24c14474408de008c018b6 360 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 183 344 7.5E-40 T 29-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CVS42_RS18795 ec477f819d24c14474408de008c018b6 360 Gene3D G3DSA:3.40.50.2000 2 169 3.3E-43 T 29-03-2018 CVS42_RS18795 ec477f819d24c14474408de008c018b6 360 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 353 37.036 T 29-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CVS42_RS18795 ec477f819d24c14474408de008c018b6 360 Gene3D G3DSA:3.40.50.2000 170 347 7.8E-32 T 29-03-2018 CVS42_RS18795 ec477f819d24c14474408de008c018b6 360 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 347 6.4E-110 T 29-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CVS42_RS14845 2c690e7ae394d38a19e7c0edd5895b60 234 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 148 4.3E-54 T 29-03-2018 IPR023370 TsaA-like domain CVS42_RS14845 2c690e7ae394d38a19e7c0edd5895b60 234 Gene3D G3DSA:3.30.2310.10 149 230 1.0E-26 T 29-03-2018 CVS42_RS14845 2c690e7ae394d38a19e7c0edd5895b60 234 Gene3D G3DSA:2.40.30.70 4 148 1.7E-53 T 29-03-2018 IPR023370 TsaA-like domain CVS42_RS14845 2c690e7ae394d38a19e7c0edd5895b60 234 Pfam PF01980 Uncharacterised protein family UPF0066 20 142 1.0E-41 T 29-03-2018 IPR023370 TsaA-like domain CVS42_RS14845 2c690e7ae394d38a19e7c0edd5895b60 234 SUPERFAMILY SSF118196 2 228 5.23E-86 T 29-03-2018 IPR023370 TsaA-like domain CVS42_RS14845 2c690e7ae394d38a19e7c0edd5895b60 234 ProSitePatterns PS01318 TsaA-like domain signature. 86 97 - T 29-03-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site CVS42_RS18950 cb05c9845b45c4ef59f042b1a43373ee 398 Pfam PF07559 Flagellar basal body protein FlaE 174 279 1.2E-20 T 29-03-2018 IPR011491 Flagellar hook protein FlgE CVS42_RS18950 cb05c9845b45c4ef59f042b1a43373ee 398 Gene3D G3DSA:2.60.98.20 144 280 4.6E-31 T 29-03-2018 IPR011491 Flagellar hook protein FlgE CVS42_RS18950 cb05c9845b45c4ef59f042b1a43373ee 398 Pfam PF00460 Flagella basal body rod protein 4 33 2.2E-8 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CVS42_RS18950 cb05c9845b45c4ef59f042b1a43373ee 398 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 332 394 4.2E-16 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CVS42_RS18950 cb05c9845b45c4ef59f042b1a43373ee 398 SUPERFAMILY SSF117143 73 359 1.96E-79 T 29-03-2018 CVS42_RS18950 cb05c9845b45c4ef59f042b1a43373ee 398 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 380 7.7E-93 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CVS42_RS16890 dc9f30aa9c0dbef13ecf4aac8bdb28f4 184 Pfam PF12464 Maltose acetyltransferase 6 53 2.2E-10 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CVS42_RS16890 dc9f30aa9c0dbef13ecf4aac8bdb28f4 184 Gene3D G3DSA:2.160.10.10 1 183 1.4E-50 T 29-03-2018 CVS42_RS16890 dc9f30aa9c0dbef13ecf4aac8bdb28f4 184 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 91 104 0.06 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS16890 dc9f30aa9c0dbef13ecf4aac8bdb28f4 184 SUPERFAMILY SSF51161 2 178 3.19E-48 T 29-03-2018 IPR011004 Trimeric LpxA-like CVS42_RS16890 dc9f30aa9c0dbef13ecf4aac8bdb28f4 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CVS42_RS16890 dc9f30aa9c0dbef13ecf4aac8bdb28f4 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 128 162 2.9E-10 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS16890 dc9f30aa9c0dbef13ecf4aac8bdb28f4 184 SMART SM01266 4 56 1.5E-13 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CVS42_RS09860 d1d76b3bf947ecf0098be69216aa8453 726 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 325 331 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CVS42_RS09860 d1d76b3bf947ecf0098be69216aa8453 726 Gene3D G3DSA:3.40.50.150 511 720 2.5E-44 T 29-03-2018 CVS42_RS09860 d1d76b3bf947ecf0098be69216aa8453 726 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 206 217 - T 29-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS09860 d1d76b3bf947ecf0098be69216aa8453 726 PIRSF PIRSF037618 11 721 0.0 T 29-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS09860 d1d76b3bf947ecf0098be69216aa8453 726 SMART SM00981 68 166 9.4E-22 T 29-03-2018 IPR004114 THUMP domain GO:0003723 CVS42_RS09860 d1d76b3bf947ecf0098be69216aa8453 726 SUPERFAMILY SSF53335 413 719 3.41E-70 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS09860 d1d76b3bf947ecf0098be69216aa8453 726 Gene3D G3DSA:3.30.750.80 410 510 3.2E-9 T 29-03-2018 CVS42_RS09860 d1d76b3bf947ecf0098be69216aa8453 726 Gene3D G3DSA:3.40.50.150 181 409 1.2E-25 T 29-03-2018 CVS42_RS09860 d1d76b3bf947ecf0098be69216aa8453 726 Pfam PF02926 THUMP domain 43 165 7.7E-11 T 29-03-2018 IPR004114 THUMP domain GO:0003723 CVS42_RS09860 d1d76b3bf947ecf0098be69216aa8453 726 Pfam PF01170 Putative RNA methylase family UPF0020 174 394 1.2E-50 T 29-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS09860 d1d76b3bf947ecf0098be69216aa8453 726 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 16 720 33.321 T 29-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS09860 d1d76b3bf947ecf0098be69216aa8453 726 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 450 681 2.7E-27 T 29-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CVS42_RS09860 d1d76b3bf947ecf0098be69216aa8453 726 SUPERFAMILY SSF53335 152 228 6.8E-32 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS09860 d1d76b3bf947ecf0098be69216aa8453 726 SUPERFAMILY SSF53335 269 393 6.8E-32 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS20605 2dacd731c0e3d5ab3a21ce6a04b155d7 92 Gene3D G3DSA:3.40.1260.10 1 85 1.5E-19 T 29-03-2018 CVS42_RS20605 2dacd731c0e3d5ab3a21ce6a04b155d7 92 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 90 2.3E-23 T 29-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 CVS42_RS20605 2dacd731c0e3d5ab3a21ce6a04b155d7 92 Pfam PF04077 DsrH like protein 8 84 1.0E-19 T 29-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 CVS42_RS20605 2dacd731c0e3d5ab3a21ce6a04b155d7 92 SUPERFAMILY SSF75169 1 90 4.27E-20 T 29-03-2018 IPR027396 DsrEFH-like CVS42_RS01250 a672569a4ba580732563d5aeba0987c3 463 Gene3D G3DSA:3.30.565.10 301 463 5.8E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS01250 a672569a4ba580732563d5aeba0987c3 463 SMART SM00387 356 463 4.5E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS01250 a672569a4ba580732563d5aeba0987c3 463 SMART SM00388 259 317 5.4E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS01250 a672569a4ba580732563d5aeba0987c3 463 SUPERFAMILY SSF47384 243 315 2.94E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS01250 a672569a4ba580732563d5aeba0987c3 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 3.7E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS01250 a672569a4ba580732563d5aeba0987c3 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 462 3.7E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS01250 a672569a4ba580732563d5aeba0987c3 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 3.7E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS01250 a672569a4ba580732563d5aeba0987c3 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 3.7E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS01250 a672569a4ba580732563d5aeba0987c3 463 Pfam PF00672 HAMP domain 206 254 1.3E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS01250 a672569a4ba580732563d5aeba0987c3 463 Gene3D G3DSA:1.10.287.130 249 300 7.4E-11 T 29-03-2018 CVS42_RS01250 a672569a4ba580732563d5aeba0987c3 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 316 4.4E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS01250 a672569a4ba580732563d5aeba0987c3 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 463 1.0E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS01250 a672569a4ba580732563d5aeba0987c3 463 SMART SM00304 206 258 1.4E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS01250 a672569a4ba580732563d5aeba0987c3 463 SUPERFAMILY SSF55874 319 463 2.88E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS18450 385b8cb4d4d9924a79fd2f33908dfa80 166 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 29-03-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 CVS42_RS18450 385b8cb4d4d9924a79fd2f33908dfa80 166 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 166 36.368 T 29-03-2018 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 CVS42_RS18450 385b8cb4d4d9924a79fd2f33908dfa80 166 SUPERFAMILY SSF52833 4 164 6.17E-40 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS18450 385b8cb4d4d9924a79fd2f33908dfa80 166 Pfam PF08534 Redoxin 21 163 1.9E-25 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CVS42_RS18450 385b8cb4d4d9924a79fd2f33908dfa80 166 Gene3D G3DSA:3.40.30.10 12 166 2.7E-21 T 29-03-2018 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 PIRSF PIRSF000381 9 1203 0.0 T 29-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 Gene3D G3DSA:3.20.20.20 353 652 7.2E-74 T 29-03-2018 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 Gene3D G3DSA:3.10.196.10 1089 1231 5.0E-62 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 Gene3D G3DSA:3.10.196.10 964 1088 2.2E-44 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 SUPERFAMILY SSF56507 910 1231 3.79E-129 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 Gene3D G3DSA:1.10.1240.10 659 738 1.1E-37 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 Pfam PF02310 B12 binding domain 755 848 4.0E-18 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 TIGRFAM TIGR02082 metH: methionine synthase 21 1200 0.0 T 29-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 Pfam PF02607 B12 binding domain 668 739 3.7E-25 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 Gene3D G3DSA:3.20.20.330 10 344 6.7E-109 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 Pfam PF02574 Homocysteine S-methyltransferase 25 333 2.4E-79 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 SUPERFAMILY SSF82282 15 407 9.42E-117 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 Pfam PF00809 Pterin binding enzyme 368 606 2.1E-60 T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 946 1216 1.1E-124 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 Gene3D G3DSA:3.40.50.280 739 912 5.3E-56 T 29-03-2018 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 SUPERFAMILY SSF47644 659 746 7.59E-29 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 SMART SM01018 664 747 2.7E-45 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 SUPERFAMILY SSF51717 364 638 1.44E-88 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CVS42_RS20145 a0e19db24a6cbffd89702d1446a59fb4 1231 SUPERFAMILY SSF52242 749 901 1.06E-43 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CVS42_RS04345 34d7f85ede004aa42710c8c0b0b41691 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 589 6.4E-40 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS04345 34d7f85ede004aa42710c8c0b0b41691 623 Gene3D G3DSA:3.30.450.20 154 270 6.6E-15 T 29-03-2018 CVS42_RS04345 34d7f85ede004aa42710c8c0b0b41691 623 SUPERFAMILY SSF58104 314 621 4.05E-75 T 29-03-2018 CVS42_RS04345 34d7f85ede004aa42710c8c0b0b41691 623 Gene3D G3DSA:1.10.287.950 402 623 1.0E-46 T 29-03-2018 CVS42_RS04345 34d7f85ede004aa42710c8c0b0b41691 623 Gene3D G3DSA:1.10.287.1060 312 401 3.6E-4 T 29-03-2018 CVS42_RS04345 34d7f85ede004aa42710c8c0b0b41691 623 Pfam PF00672 HAMP domain 294 339 8.2E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS04345 34d7f85ede004aa42710c8c0b0b41691 623 Gene3D G3DSA:3.30.450.20 27 153 2.9E-16 T 29-03-2018 CVS42_RS04345 34d7f85ede004aa42710c8c0b0b41691 623 SUPERFAMILY SSF103190 86 171 1.49E-10 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CVS42_RS04345 34d7f85ede004aa42710c8c0b0b41691 623 Pfam PF02743 Cache domain 39 254 1.2E-17 T 29-03-2018 IPR033479 Double Cache domain 1 CVS42_RS04345 34d7f85ede004aa42710c8c0b0b41691 623 SMART SM00304 292 346 3.2E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS04345 34d7f85ede004aa42710c8c0b0b41691 623 SMART SM00283 365 622 1.4E-66 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS01240 b928189a1be580774abc4c756455a06c 647 SUPERFAMILY SSF56935 22 647 7.59E-124 T 29-03-2018 CVS42_RS01240 b928189a1be580774abc4c756455a06c 647 Pfam PF00593 TonB dependent receptor 193 646 2.8E-56 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS01240 b928189a1be580774abc4c756455a06c 647 Gene3D G3DSA:2.170.130.10 14 154 6.5E-35 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS01240 b928189a1be580774abc4c756455a06c 647 Pfam PF07715 TonB-dependent Receptor Plug Domain 38 147 9.4E-28 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS01240 b928189a1be580774abc4c756455a06c 647 Gene3D G3DSA:2.40.170.20 159 647 3.7E-76 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS18785 e644e1788744b27e9ebf9ce2068ccdba 227 Pfam PF03799 Cell division protein FtsQ 95 205 3.1E-19 T 29-03-2018 IPR005548 Cell division protein FtsQ/DivIB CVS42_RS18785 e644e1788744b27e9ebf9ce2068ccdba 227 Pfam PF08478 POTRA domain, FtsQ-type 22 91 7.0E-17 T 29-03-2018 IPR013685 POTRA domain, FtsQ-type CVS42_RS18785 e644e1788744b27e9ebf9ce2068ccdba 227 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 2 213 19.212 T 29-03-2018 IPR026579 Cell division protein FtsQ GO:0090529 CVS42_RS01115 351a8124e6a95dcf4d8d98f5d2c68db7 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.366 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01115 351a8124e6a95dcf4d8d98f5d2c68db7 63 SUPERFAMILY SSF46561 1 61 6.67E-22 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01115 351a8124e6a95dcf4d8d98f5d2c68db7 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.1E-23 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01115 351a8124e6a95dcf4d8d98f5d2c68db7 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 29-03-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01115 351a8124e6a95dcf4d8d98f5d2c68db7 63 Gene3D G3DSA:1.10.287.310 1 63 7.3E-24 T 29-03-2018 CVS42_RS01115 351a8124e6a95dcf4d8d98f5d2c68db7 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 5.2E-23 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS21870 6ee53f4d058ad310667437bb59f322be 813 Gene3D G3DSA:3.40.50.1820 429 769 1.3E-8 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS21870 6ee53f4d058ad310667437bb59f322be 813 Pfam PF12262 Bacterial virulence factor lipase N-terminal 28 254 3.0E-26 T 29-03-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain CVS42_RS21870 6ee53f4d058ad310667437bb59f322be 813 SUPERFAMILY SSF53474 437 588 2.44E-6 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS21870 6ee53f4d058ad310667437bb59f322be 813 Gene3D G3DSA:3.40.190.10 1 360 6.9E-4 T 29-03-2018 CVS42_RS21870 6ee53f4d058ad310667437bb59f322be 813 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 798 8.8E-150 T 29-03-2018 IPR020009 Extracellular lipase, Pla-1/cef family CVS42_RS19155 ca22e5997d5a5d5ec5dd200df8b7e120 258 TIGRFAM TIGR03580 EF_0832: conserved hypothetical protein EF_0832/AHA_3913 2 258 9.7E-150 T 29-03-2018 IPR020042 Protein of unknown function DUF4311 CVS42_RS19155 ca22e5997d5a5d5ec5dd200df8b7e120 258 Pfam PF14188 Domain of unknown function (DUF4311) 25 237 9.3E-120 T 29-03-2018 IPR020042 Protein of unknown function DUF4311 CVS42_RS16295 6744a9013d41fe2a2d260225346264a2 345 Pfam PF02424 ApbE family 38 318 2.0E-87 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CVS42_RS16295 6744a9013d41fe2a2d260225346264a2 345 Gene3D G3DSA:3.10.520.10 22 331 8.0E-65 T 29-03-2018 CVS42_RS16295 6744a9013d41fe2a2d260225346264a2 345 PIRSF PIRSF006268 1 344 8.0E-110 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CVS42_RS16295 6744a9013d41fe2a2d260225346264a2 345 SUPERFAMILY SSF143631 31 342 5.23E-104 T 29-03-2018 IPR003374 ApbE-like domain CVS42_RS10635 ebd99d204cda1140c3f614b9d8a97a3e 334 Pfam PF00586 AIR synthase related protein, N-terminal domain 36 146 1.4E-16 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CVS42_RS10635 ebd99d204cda1140c3f614b9d8a97a3e 334 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 4 334 2.6E-129 T 29-03-2018 IPR011854 Hydrogenase expression/formation protein HypE CVS42_RS10635 ebd99d204cda1140c3f614b9d8a97a3e 334 SUPERFAMILY SSF55326 3 147 7.15E-33 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CVS42_RS10635 ebd99d204cda1140c3f614b9d8a97a3e 334 SUPERFAMILY SSF56042 157 329 3.59E-41 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS10635 ebd99d204cda1140c3f614b9d8a97a3e 334 PIRSF PIRSF005644 1 334 9.4E-118 T 29-03-2018 IPR011854 Hydrogenase expression/formation protein HypE CVS42_RS10635 ebd99d204cda1140c3f614b9d8a97a3e 334 Gene3D G3DSA:3.30.1330.10 11 149 5.7E-24 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CVS42_RS10635 ebd99d204cda1140c3f614b9d8a97a3e 334 Gene3D G3DSA:3.90.650.10 156 322 1.6E-39 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS10635 ebd99d204cda1140c3f614b9d8a97a3e 334 Pfam PF02769 AIR synthase related protein, C-terminal domain 162 312 5.9E-22 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 Gene3D G3DSA:2.60.40.10 2518 2653 0.0015 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3417 3435 - T 29-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 Gene3D G3DSA:2.60.120.640 2930 3050 0.068 T 29-03-2018 CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 Gene3D G3DSA:2.60.120.640 1614 1739 3.9E-7 T 29-03-2018 CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 Gene3D G3DSA:2.60.120.640 1880 2007 5.9E-4 T 29-03-2018 CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 Gene3D G3DSA:2.60.120.640 3175 3306 1.1E-9 T 29-03-2018 CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 Gene3D G3DSA:2.60.120.640 1755 1879 0.31 T 29-03-2018 CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 Gene3D G3DSA:2.60.120.640 3051 3174 1.2E-9 T 29-03-2018 CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 Gene3D G3DSA:2.60.40.10 1005 1146 0.059 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 Gene3D G3DSA:2.60.40.10 2783 2904 0.028 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3426 3444 - T 29-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 SUPERFAMILY SSF51120 3370 3535 3.4E-18 T 29-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1498 1618 3.4E-29 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 763 888 2.2E-19 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 Gene3D G3DSA:2.60.40.10 879 1004 0.073 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 Gene3D G3DSA:2.60.40.10 362 445 1.6E-8 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 Gene3D G3DSA:2.60.40.10 267 361 9.2E-16 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 Gene3D G3DSA:2.60.40.10 166 266 4.9E-6 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 Gene3D G3DSA:2.60.40.10 762 870 0.55 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 Gene3D G3DSA:2.60.40.10 624 745 0.35 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 3462 3555 6.3E-16 T 29-03-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 Gene3D G3DSA:2.60.40.1310 446 574 3.7E-4 T 29-03-2018 CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 Gene3D G3DSA:2.60.40.10 1298 1458 0.57 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 PRINTS PR00313 NodO calcium binding signature 3401 3412 5.1E-5 T 29-03-2018 CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 PRINTS PR00313 NodO calcium binding signature 3439 3448 5.1E-5 T 29-03-2018 CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 PRINTS PR00313 NodO calcium binding signature 3430 3438 5.1E-5 T 29-03-2018 CVS42_RS08710 9beb73a3df4ffe5133671a9088b2984b 3562 PRINTS PR00313 NodO calcium binding signature 3421 3429 5.1E-5 T 29-03-2018 CVS42_RS16845 46454c6e104bd8660f3fa042c5d334b6 149 SUPERFAMILY SSF52304 3 146 3.53E-63 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CVS42_RS16845 46454c6e104bd8660f3fa042c5d334b6 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 75.916 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CVS42_RS16845 46454c6e104bd8660f3fa042c5d334b6 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 29-03-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CVS42_RS16845 46454c6e104bd8660f3fa042c5d334b6 149 Gene3D G3DSA:3.40.50.9100 2 149 5.7E-70 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CVS42_RS16845 46454c6e104bd8660f3fa042c5d334b6 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 1.0E-64 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CVS42_RS16845 46454c6e104bd8660f3fa042c5d334b6 149 PIRSF PIRSF001399 3 149 2.9E-61 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CVS42_RS16845 46454c6e104bd8660f3fa042c5d334b6 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 20 144 3.0E-65 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CVS42_RS16845 46454c6e104bd8660f3fa042c5d334b6 149 Pfam PF01220 Dehydroquinase class II 6 142 9.3E-63 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CVS42_RS22050 9465b3b3650c4df47b7ee1b11c6dc7bd 176 Pfam PF01618 MotA/TolQ/ExbB proton channel family 64 164 2.7E-21 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CVS42_RS05630 3c4a3622ae056c5b72c8d8992125d421 176 Pfam PF08534 Redoxin 38 161 1.6E-20 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CVS42_RS05630 3c4a3622ae056c5b72c8d8992125d421 176 Gene3D G3DSA:3.40.30.10 32 176 5.1E-26 T 29-03-2018 CVS42_RS05630 3c4a3622ae056c5b72c8d8992125d421 176 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 9 173 8.9E-61 T 29-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 CVS42_RS05630 3c4a3622ae056c5b72c8d8992125d421 176 ProSitePatterns PS00194 Thioredoxin family active site. 68 86 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CVS42_RS05630 3c4a3622ae056c5b72c8d8992125d421 176 SUPERFAMILY SSF52833 43 173 3.87E-36 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS09055 d444263a2d95c3c5ad0090db46b1cfc9 205 PIRSF PIRSF000498 1 204 9.4E-67 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS09055 d444263a2d95c3c5ad0090db46b1cfc9 205 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 2.0E-71 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS09055 d444263a2d95c3c5ad0090db46b1cfc9 205 SUPERFAMILY SSF63380 94 199 6.72E-28 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CVS42_RS09055 d444263a2d95c3c5ad0090db46b1cfc9 205 Pfam PF00677 Lumazine binding domain 101 185 4.8E-19 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS09055 d444263a2d95c3c5ad0090db46b1cfc9 205 Pfam PF00677 Lumazine binding domain 3 88 3.2E-21 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS09055 d444263a2d95c3c5ad0090db46b1cfc9 205 SUPERFAMILY SSF63380 1 94 7.06E-28 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CVS42_RS09055 d444263a2d95c3c5ad0090db46b1cfc9 205 Gene3D G3DSA:2.40.30.20 1 94 2.0E-26 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS09055 d444263a2d95c3c5ad0090db46b1cfc9 205 Gene3D G3DSA:2.40.30.20 95 192 6.7E-24 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS20385 9d566738f84ab7b32afbdb1586d80345 284 PIRSF PIRSF000770 18 284 5.7E-36 T 29-03-2018 CVS42_RS20385 9d566738f84ab7b32afbdb1586d80345 284 Gene3D G3DSA:1.10.601.10 13 123 6.6E-36 T 29-03-2018 CVS42_RS20385 9d566738f84ab7b32afbdb1586d80345 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 3 284 53.234 T 29-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CVS42_RS20385 9d566738f84ab7b32afbdb1586d80345 284 Gene3D G3DSA:1.10.10.10 222 284 1.9E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20385 9d566738f84ab7b32afbdb1586d80345 284 Pfam PF04542 Sigma-70 region 2 54 123 1.7E-17 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS20385 9d566738f84ab7b32afbdb1586d80345 284 SUPERFAMILY SSF88659 197 283 3.36E-20 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS20385 9d566738f84ab7b32afbdb1586d80345 284 Pfam PF04545 Sigma-70, region 4 228 279 2.0E-16 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS20385 9d566738f84ab7b32afbdb1586d80345 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 283 5.3E-128 T 29-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CVS42_RS20385 9d566738f84ab7b32afbdb1586d80345 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS20385 9d566738f84ab7b32afbdb1586d80345 284 Pfam PF00140 Sigma-70 factor, region 1.2 20 45 1.1E-6 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS20385 9d566738f84ab7b32afbdb1586d80345 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 282 7.5E-38 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS20385 9d566738f84ab7b32afbdb1586d80345 284 SUPERFAMILY SSF88946 14 123 2.62E-40 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS20385 9d566738f84ab7b32afbdb1586d80345 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS20385 9d566738f84ab7b32afbdb1586d80345 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 7.3E-19 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS20385 9d566738f84ab7b32afbdb1586d80345 284 PRINTS PR00046 Major sigma-70 factor signature 232 244 7.3E-19 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS20385 9d566738f84ab7b32afbdb1586d80345 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 7.3E-19 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS20385 9d566738f84ab7b32afbdb1586d80345 284 PRINTS PR00046 Major sigma-70 factor signature 78 91 7.3E-19 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS13740 bb73f8af71d18f81d2b1c474c7400076 255 SUPERFAMILY SSF51735 5 253 1.42E-69 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS13740 bb73f8af71d18f81d2b1c474c7400076 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13740 bb73f8af71d18f81d2b1c474c7400076 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 7.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13740 bb73f8af71d18f81d2b1c474c7400076 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 7.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13740 bb73f8af71d18f81d2b1c474c7400076 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 7.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13740 bb73f8af71d18f81d2b1c474c7400076 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 7.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13740 bb73f8af71d18f81d2b1c474c7400076 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 7.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13740 bb73f8af71d18f81d2b1c474c7400076 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 1.5E-51 T 29-03-2018 CVS42_RS13740 bb73f8af71d18f81d2b1c474c7400076 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CVS42_RS13740 bb73f8af71d18f81d2b1c474c7400076 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 1.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13740 bb73f8af71d18f81d2b1c474c7400076 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13740 bb73f8af71d18f81d2b1c474c7400076 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 1.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13740 bb73f8af71d18f81d2b1c474c7400076 255 Gene3D G3DSA:3.40.50.720 1 40 1.1E-7 T 29-03-2018 CVS42_RS13740 bb73f8af71d18f81d2b1c474c7400076 255 Gene3D G3DSA:3.40.50.720 41 255 8.4E-58 T 29-03-2018 CVS42_RS13555 5b3a39a333a4d7eba0f0bf2b9a7552fb 401 Gene3D G3DSA:1.20.1330.10 38 375 1.3E-20 T 29-03-2018 CVS42_RS13555 5b3a39a333a4d7eba0f0bf2b9a7552fb 401 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 9.9E-17 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CVS42_RS13555 5b3a39a333a4d7eba0f0bf2b9a7552fb 401 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 400 7.0E-65 T 29-03-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 CVS42_RS13555 5b3a39a333a4d7eba0f0bf2b9a7552fb 401 SUPERFAMILY SSF64518 1 401 6.8E-69 T 29-03-2018 CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 SUPERFAMILY SSF81901 175 361 1.92E-30 T 29-03-2018 CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 SMART SM00671 255 286 14.0 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 SMART SM00671 93 125 0.005 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 SMART SM00671 58 92 7.6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 SMART SM00671 287 322 9.2E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 SMART SM00671 323 358 0.031 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 SMART SM00671 126 161 6.9E-7 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 SMART SM00671 22 57 1.8E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 SMART SM00671 190 225 0.0013 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 SUPERFAMILY SSF81901 22 169 1.31E-28 T 29-03-2018 CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 Pfam PF08238 Sel1 repeat 190 225 1.9E-4 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 Pfam PF08238 Sel1 repeat 288 322 0.0043 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 Pfam PF08238 Sel1 repeat 94 125 0.0073 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 Pfam PF08238 Sel1 repeat 23 57 1.1E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 Pfam PF08238 Sel1 repeat 2 10 86.0 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 Pfam PF08238 Sel1 repeat 60 92 0.0032 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 Pfam PF08238 Sel1 repeat 127 159 2.3E-7 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 Pfam PF08238 Sel1 repeat 325 357 2.8E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 Gene3D G3DSA:2.60.40.1180 171 240 9.7E-8 T 29-03-2018 CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 Gene3D G3DSA:2.60.40.1180 113 170 1.7E-13 T 29-03-2018 CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 Gene3D G3DSA:2.60.40.1180 263 391 1.9E-21 T 29-03-2018 CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 Gene3D G3DSA:2.60.40.1180 78 112 4.6E-6 T 29-03-2018 CVS42_RS11805 2e65f324ee4b073946ba2705f1f37219 391 Gene3D G3DSA:2.60.40.1180 1 77 7.2E-11 T 29-03-2018 CVS42_RS18375 0dfb6d61837474294289056edb5f9be7 398 Pfam PF07670 Nucleoside recognition 89 184 4.8E-7 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CVS42_RS18375 0dfb6d61837474294289056edb5f9be7 398 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 1.2E-22 T 29-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CVS42_RS18375 0dfb6d61837474294289056edb5f9be7 398 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 395 5.2E-135 T 29-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CVS42_RS18375 0dfb6d61837474294289056edb5f9be7 398 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 191 395 1.5E-70 T 29-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CVS42_RS22170 d398e1509252442853561592d02c3c42 629 SMART SM01228 546 617 9.9E-45 T 29-03-2018 CVS42_RS22170 d398e1509252442853561592d02c3c42 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.522 T 29-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CVS42_RS22170 d398e1509252442853561592d02c3c42 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 29-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CVS42_RS22170 d398e1509252442853561592d02c3c42 629 SUPERFAMILY SSF51905 97 261 6.79E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS22170 d398e1509252442853561592d02c3c42 629 SUPERFAMILY SSF51905 6 66 6.79E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS22170 d398e1509252442853561592d02c3c42 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 29-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CVS42_RS22170 d398e1509252442853561592d02c3c42 629 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 358 379 9.8E-7 T 29-03-2018 CVS42_RS22170 d398e1509252442853561592d02c3c42 629 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 9.8E-7 T 29-03-2018 CVS42_RS22170 d398e1509252442853561592d02c3c42 629 Gene3D G3DSA:3.50.50.60 5 264 3.1E-75 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS22170 d398e1509252442853561592d02c3c42 629 Pfam PF01134 Glucose inhibited division protein A 8 398 1.8E-166 T 29-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CVS42_RS22170 d398e1509252442853561592d02c3c42 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 1.8E-280 T 29-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CVS42_RS22170 d398e1509252442853561592d02c3c42 629 Pfam PF13932 GidA associated domain 403 616 3.5E-75 T 29-03-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 CVS42_RS01475 f7a21d745b9c78d157893f2f3395936f 151 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 135 5.0E-37 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CVS42_RS01475 f7a21d745b9c78d157893f2f3395936f 151 Gene3D G3DSA:3.40.50.10110 1 140 2.3E-40 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CVS42_RS01475 f7a21d745b9c78d157893f2f3395936f 151 SUPERFAMILY SSF102400 1 140 2.09E-37 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CVS42_RS10785 02da16522dbe899d5e0fa09bb49a5739 397 SUPERFAMILY SSF53448 44 318 1.31E-31 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS10785 02da16522dbe899d5e0fa09bb49a5739 397 Gene3D G3DSA:3.90.550.10 30 298 2.5E-29 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS10785 02da16522dbe899d5e0fa09bb49a5739 397 Pfam PF13641 Glycosyltransferase like family 2 57 273 7.2E-14 T 29-03-2018 CVS42_RS17200 6b2bc294e9871e0503acb0a05a1137fe 166 SUPERFAMILY SSF47413 3 59 1.07E-13 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS17200 6b2bc294e9871e0503acb0a05a1137fe 166 Pfam PF01381 Helix-turn-helix 3 54 4.6E-14 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS17200 6b2bc294e9871e0503acb0a05a1137fe 166 SMART SM00530 2 56 5.7E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS17200 6b2bc294e9871e0503acb0a05a1137fe 166 Gene3D G3DSA:1.10.260.40 1 74 5.3E-17 T 29-03-2018 CVS42_RS17200 6b2bc294e9871e0503acb0a05a1137fe 166 Pfam PF13239 2TM domain 85 162 5.1E-27 T 29-03-2018 IPR025698 2TM domain CVS42_RS13170 da5f553ccadd339b594f79234d8469ea 801 Gene3D G3DSA:3.40.710.10 266 636 2.9E-64 T 29-03-2018 CVS42_RS13170 da5f553ccadd339b594f79234d8469ea 801 SUPERFAMILY SSF53955 70 287 1.04E-59 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS13170 da5f553ccadd339b594f79234d8469ea 801 Pfam PF00905 Penicillin binding protein transpeptidase domain 332 549 5.3E-13 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CVS42_RS13170 da5f553ccadd339b594f79234d8469ea 801 SUPERFAMILY SSF56601 238 653 8.14E-89 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CVS42_RS13170 da5f553ccadd339b594f79234d8469ea 801 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 710 787 1.9E-6 T 29-03-2018 IPR009647 Penicillin-binding, C-terminal CVS42_RS13170 da5f553ccadd339b594f79234d8469ea 801 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 71 789 3.4E-219 T 29-03-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 CVS42_RS13170 da5f553ccadd339b594f79234d8469ea 801 Gene3D G3DSA:1.10.3810.10 72 265 3.9E-54 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CVS42_RS13170 da5f553ccadd339b594f79234d8469ea 801 Pfam PF00912 Transglycosylase 83 256 8.5E-48 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CVS42_RS10775 7e2a5ecd9b48460fbd2072e0ba1fe11c 471 Gene3D G3DSA:3.30.1890.10 39 392 2.0E-13 T 29-03-2018 CVS42_RS10775 7e2a5ecd9b48460fbd2072e0ba1fe11c 471 Pfam PF13807 G-rich domain on putative tyrosine kinase 334 416 8.6E-8 T 29-03-2018 IPR032807 Tyrosine kinase, G-rich domain CVS42_RS10775 7e2a5ecd9b48460fbd2072e0ba1fe11c 471 Pfam PF02706 Chain length determinant protein 9 94 6.2E-6 T 29-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CVS42_RS15765 3c8e5fb7e396705d6dd55e847a068a48 682 Pfam PF01431 Peptidase family M13 478 679 2.0E-73 T 29-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CVS42_RS15765 3c8e5fb7e396705d6dd55e847a068a48 682 Gene3D G3DSA:3.40.390.10 29 682 7.4E-131 T 29-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CVS42_RS15765 3c8e5fb7e396705d6dd55e847a068a48 682 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 580 591 2.6E-21 T 29-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CVS42_RS15765 3c8e5fb7e396705d6dd55e847a068a48 682 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 470 482 2.6E-21 T 29-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CVS42_RS15765 3c8e5fb7e396705d6dd55e847a068a48 682 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 488 500 2.6E-21 T 29-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CVS42_RS15765 3c8e5fb7e396705d6dd55e847a068a48 682 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 509 525 2.6E-21 T 29-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CVS42_RS15765 3c8e5fb7e396705d6dd55e847a068a48 682 Pfam PF05649 Peptidase family M13 49 426 1.5E-105 T 29-03-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 CVS42_RS15765 3c8e5fb7e396705d6dd55e847a068a48 682 SUPERFAMILY SSF55486 36 682 3.22E-218 T 29-03-2018 CVS42_RS04480 41bcda72a8464f1e6d7d1d5512fccb17 136 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 29.757 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CVS42_RS04480 41bcda72a8464f1e6d7d1d5512fccb17 136 SUPERFAMILY SSF81330 13 127 1.57E-35 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CVS42_RS04480 41bcda72a8464f1e6d7d1d5512fccb17 136 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 29-03-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site CVS42_RS04480 41bcda72a8464f1e6d7d1d5512fccb17 136 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 7.8E-46 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CVS42_RS04480 41bcda72a8464f1e6d7d1d5512fccb17 136 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 6.9E-52 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CVS42_RS04480 41bcda72a8464f1e6d7d1d5512fccb17 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 9.7E-12 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CVS42_RS04480 41bcda72a8464f1e6d7d1d5512fccb17 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 9.7E-12 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CVS42_RS04480 41bcda72a8464f1e6d7d1d5512fccb17 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 9.7E-12 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CVS42_RS11460 64741b1c6c66926b8e30fd5e5e30c30e 305 Pfam PF00892 EamA-like transporter family 152 282 3.4E-17 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS11460 64741b1c6c66926b8e30fd5e5e30c30e 305 Pfam PF00892 EamA-like transporter family 10 137 3.9E-20 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS11460 64741b1c6c66926b8e30fd5e5e30c30e 305 SUPERFAMILY SSF103481 189 285 7.72E-15 T 29-03-2018 CVS42_RS11460 64741b1c6c66926b8e30fd5e5e30c30e 305 SUPERFAMILY SSF103481 38 140 1.57E-15 T 29-03-2018 CVS42_RS11905 7a09a7af9f71d1e279fd69dcaa44c982 197 Pfam PF00925 GTP cyclohydrolase II 8 171 1.2E-69 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CVS42_RS11905 7a09a7af9f71d1e279fd69dcaa44c982 197 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 2 197 45.188 T 29-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CVS42_RS11905 7a09a7af9f71d1e279fd69dcaa44c982 197 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 195 4.4E-82 T 29-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CVS42_RS11905 7a09a7af9f71d1e279fd69dcaa44c982 197 SUPERFAMILY SSF142695 3 173 1.7E-67 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 SUPERFAMILY SSF51905 142 335 2.76E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 SMART SM00450 459 562 2.6E-15 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 SUPERFAMILY SSF51905 2 198 7.5E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 SUPERFAMILY SSF52821 457 559 1.7E-22 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 Gene3D G3DSA:3.50.50.60 1 125 1.9E-16 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 Gene3D G3DSA:3.50.50.60 126 267 1.3E-27 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 Gene3D G3DSA:3.30.390.30 363 468 3.2E-20 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 Gene3D G3DSA:3.40.250.10 470 562 4.6E-20 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 SUPERFAMILY SSF55424 340 460 1.53E-29 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 Pfam PF00581 Rhodanese-like domain 479 558 7.7E-10 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 Gene3D G3DSA:3.50.50.60 268 362 4.4E-12 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 445 1.0E-10 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 319 4.8E-55 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 251 267 6.6E-22 T 29-03-2018 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 6.6E-22 T 29-03-2018 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 278 300 6.6E-22 T 29-03-2018 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 6.6E-22 T 29-03-2018 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 6.6E-22 T 29-03-2018 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 252 266 4.7E-14 T 29-03-2018 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.7E-14 T 29-03-2018 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 4.7E-14 T 29-03-2018 CVS42_RS13185 c8c3d3bb18f580532be7c80580da919e 562 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 293 300 4.7E-14 T 29-03-2018 CVS42_RS00585 fbbc6022234354b9625580be4e7813e0 321 Gene3D G3DSA:1.10.3470.10 7 306 1.9E-39 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CVS42_RS00585 fbbc6022234354b9625580be4e7813e0 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 296 1.6E-36 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CVS42_RS19235 4324469c7650739a8b0fff8ae6497f33 266 Pfam PF00005 ABC transporter 26 173 1.2E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS19235 4324469c7650739a8b0fff8ae6497f33 266 Gene3D G3DSA:3.40.50.300 6 251 1.3E-63 T 29-03-2018 CVS42_RS19235 4324469c7650739a8b0fff8ae6497f33 266 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS19235 4324469c7650739a8b0fff8ae6497f33 266 SUPERFAMILY SSF52540 9 238 1.2E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS19235 4324469c7650739a8b0fff8ae6497f33 266 SMART SM00382 34 231 5.5E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS09880 44e15cfaa4f05f7756a0d517254318c6 186 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 16 186 52.638 T 29-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CVS42_RS09880 44e15cfaa4f05f7756a0d517254318c6 186 Gene3D G3DSA:3.10.129.10 12 186 8.5E-53 T 29-03-2018 CVS42_RS09880 44e15cfaa4f05f7756a0d517254318c6 186 SUPERFAMILY SSF54637 18 183 1.7E-58 T 29-03-2018 IPR029069 HotDog domain CVS42_RS09880 44e15cfaa4f05f7756a0d517254318c6 186 Pfam PF07977 FabA-like domain 43 172 1.0E-52 T 29-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CVS42_RS09880 44e15cfaa4f05f7756a0d517254318c6 186 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 19 185 1.6E-95 T 29-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CVS42_RS05905 69b2407e26deb0e722fef695dbb011c5 85 SUPERFAMILY SSF140129 7 81 9.68E-27 T 29-03-2018 CVS42_RS05905 69b2407e26deb0e722fef695dbb011c5 85 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 15 85 1.3E-24 T 29-03-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 CVS42_RS05905 69b2407e26deb0e722fef695dbb011c5 85 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 15 85 2.0E-27 T 29-03-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 505 511 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 Pfam PF00702 haloacid dehalogenase-like hydrolase 499 714 1.4E-40 T 29-03-2018 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 Gene3D G3DSA:3.30.70.100 103 174 5.3E-14 T 29-03-2018 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 248 805 2.1E-150 T 29-03-2018 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 SUPERFAMILY SSF56784 501 521 2.58E-49 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 SUPERFAMILY SSF56784 560 801 2.58E-49 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 352 366 7.5E-28 T 29-03-2018 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 724 736 7.5E-28 T 29-03-2018 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 503 517 7.5E-28 T 29-03-2018 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 701 720 7.5E-28 T 29-03-2018 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 628 639 7.5E-28 T 29-03-2018 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 650 660 7.5E-28 T 29-03-2018 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 Pfam PF00403 Heavy-metal-associated domain 110 156 1.2E-7 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 SUPERFAMILY SSF81653 312 402 4.32E-19 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 SUPERFAMILY SSF81665 750 799 4.58E-19 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 SUPERFAMILY SSF81665 403 497 4.58E-19 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 SUPERFAMILY SSF81665 251 302 4.58E-19 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 272 780 9.6E-72 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 ProSitePatterns PS01229 Hypothetical cof family signature 2. 701 723 - T 29-03-2018 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 ProSitePatterns PS01047 Heavy-metal-associated domain. 110 139 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 Gene3D G3DSA:3.40.50.1000 631 768 6.7E-37 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 Gene3D G3DSA:3.40.1110.10 518 630 1.3E-24 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 Pfam PF00122 E1-E2 ATPase 301 482 2.3E-45 T 29-03-2018 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 701 717 9.3E-7 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 674 690 9.3E-7 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 732 757 9.3E-7 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 SUPERFAMILY SSF55008 101 169 7.2E-14 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 Gene3D G3DSA:1.20.1110.10 245 517 2.1E-28 T 29-03-2018 CVS42_RS18455 224d3d46da5ed92e97c98225f493a79e 807 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 248 803 1.4E-173 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 SUPERFAMILY SSF82866 801 1031 4.32E-47 T 29-03-2018 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 Gene3D G3DSA:3.30.70.1430 45 142 1.8E-18 T 29-03-2018 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.8E-29 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.8E-29 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.8E-29 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 1.8E-29 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.8E-29 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.8E-29 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.8E-29 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 SUPERFAMILY SSF82866 294 498 1.03E-40 T 29-03-2018 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1032 0.0 T 29-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 Gene3D G3DSA:3.30.2090.10 183 271 3.4E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 Gene3D G3DSA:3.30.70.1430 560 659 5.2E-10 T 29-03-2018 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 SUPERFAMILY SSF82714 716 800 7.06E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 SUPERFAMILY SSF82714 185 269 6.15E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 Gene3D G3DSA:1.20.1640.10 287 509 1.5E-42 T 29-03-2018 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 SUPERFAMILY SSF82693 46 128 4.19E-20 T 29-03-2018 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 Pfam PF00873 AcrB/AcrD/AcrF family 6 1027 4.4E-240 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 SUPERFAMILY SSF82693 271 328 3.92E-23 T 29-03-2018 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 SUPERFAMILY SSF82693 137 184 3.92E-23 T 29-03-2018 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 Gene3D G3DSA:1.20.1640.10 823 1032 9.6E-33 T 29-03-2018 CVS42_RS06810 84d9248bc0f7266a923b85444595229a 1042 Gene3D G3DSA:3.30.2090.10 716 801 6.7E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS12255 61d6c47a5f67650dc65567640012938c 79 Gene3D G3DSA:1.10.10.10 1 73 1.8E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS12255 61d6c47a5f67650dc65567640012938c 79 Pfam PF09012 FeoC like transcriptional regulator 2 67 5.9E-23 T 29-03-2018 IPR015102 Transcriptional regulator HTH-type, FeoC CVS42_RS12255 61d6c47a5f67650dc65567640012938c 79 SUPERFAMILY SSF46785 1 70 2.2E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS17360 9edfe68f842683ee3565f945496a059e 148 PIRSF PIRSF000714 1 139 2.3E-50 T 29-03-2018 IPR026026 Histidine triad hydrolase, Hint-type CVS42_RS17360 9edfe68f842683ee3565f945496a059e 148 Gene3D G3DSA:3.30.428.10 1 136 3.9E-17 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CVS42_RS17360 9edfe68f842683ee3565f945496a059e 148 Pfam PF01230 HIT domain 9 97 1.4E-14 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CVS42_RS17360 9edfe68f842683ee3565f945496a059e 148 SUPERFAMILY SSF54197 1 134 1.38E-34 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CVS42_RS13710 5cb09a76ab9f3f5b2df7de406ac67398 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 5.3E-30 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CVS42_RS13710 5cb09a76ab9f3f5b2df7de406ac67398 69 PRINTS PR00050 Cold shock protein signature 42 60 1.2E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CVS42_RS13710 5cb09a76ab9f3f5b2df7de406ac67398 69 PRINTS PR00050 Cold shock protein signature 27 36 1.2E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CVS42_RS13710 5cb09a76ab9f3f5b2df7de406ac67398 69 PRINTS PR00050 Cold shock protein signature 7 22 1.2E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CVS42_RS13710 5cb09a76ab9f3f5b2df7de406ac67398 69 PIRSF PIRSF002599 1 69 1.3E-24 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CVS42_RS13710 5cb09a76ab9f3f5b2df7de406ac67398 69 SMART SM00357 6 69 4.1E-31 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CVS42_RS13710 5cb09a76ab9f3f5b2df7de406ac67398 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 29-03-2018 IPR019844 Cold-shock conserved site CVS42_RS13710 5cb09a76ab9f3f5b2df7de406ac67398 69 Gene3D G3DSA:2.40.50.140 4 69 1.3E-28 T 29-03-2018 CVS42_RS13710 5cb09a76ab9f3f5b2df7de406ac67398 69 SUPERFAMILY SSF50249 2 68 2.57E-25 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS17095 54ab4607e016a9a9eb7d18c3bcec3b3d 359 Gene3D G3DSA:1.10.40.50 288 356 9.2E-22 T 29-03-2018 CVS42_RS17095 54ab4607e016a9a9eb7d18c3bcec3b3d 359 SUPERFAMILY SSF52540 126 349 1.87E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS17095 54ab4607e016a9a9eb7d18c3bcec3b3d 359 Gene3D G3DSA:3.40.50.300 126 286 3.7E-25 T 29-03-2018 CVS42_RS17095 54ab4607e016a9a9eb7d18c3bcec3b3d 359 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 89 345 1.0E-86 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CVS42_RS17095 54ab4607e016a9a9eb7d18c3bcec3b3d 359 Pfam PF03193 RsgA GTPase 112 287 2.3E-57 T 29-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 CVS42_RS17095 54ab4607e016a9a9eb7d18c3bcec3b3d 359 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 55 351 37.473 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CVS42_RS17095 54ab4607e016a9a9eb7d18c3bcec3b3d 359 Gene3D G3DSA:2.40.50.140 50 114 6.4E-15 T 29-03-2018 CVS42_RS01780 14af06428db6a60884aa759ac7118545 467 Gene3D G3DSA:1.20.1250.20 3 200 2.9E-36 T 29-03-2018 CVS42_RS01780 14af06428db6a60884aa759ac7118545 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 1.6E-9 T 29-03-2018 CVS42_RS01780 14af06428db6a60884aa759ac7118545 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 201 219 1.6E-9 T 29-03-2018 CVS42_RS01780 14af06428db6a60884aa759ac7118545 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 398 417 1.6E-9 T 29-03-2018 CVS42_RS01780 14af06428db6a60884aa759ac7118545 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 1.6E-9 T 29-03-2018 CVS42_RS01780 14af06428db6a60884aa759ac7118545 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 1.6E-9 T 29-03-2018 CVS42_RS01780 14af06428db6a60884aa759ac7118545 467 Gene3D G3DSA:1.20.1250.20 250 467 1.2E-18 T 29-03-2018 CVS42_RS01780 14af06428db6a60884aa759ac7118545 467 SUPERFAMILY SSF103473 8 196 7.85E-59 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS01780 14af06428db6a60884aa759ac7118545 467 SUPERFAMILY SSF103473 246 456 7.85E-59 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS01780 14af06428db6a60884aa759ac7118545 467 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 415 5.4E-71 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CVS42_RS01780 14af06428db6a60884aa759ac7118545 467 Pfam PF07690 Major Facilitator Superfamily 18 407 7.8E-47 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS06985 99afac1df77aa41efaa9ea1b83d7ffc1 546 Gene3D G3DSA:1.10.287.850 242 319 0.0049 T 29-03-2018 CVS42_RS06985 99afac1df77aa41efaa9ea1b83d7ffc1 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 511 3.5E-44 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS06985 99afac1df77aa41efaa9ea1b83d7ffc1 546 Gene3D G3DSA:1.10.287.950 320 546 4.1E-55 T 29-03-2018 CVS42_RS06985 99afac1df77aa41efaa9ea1b83d7ffc1 546 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 188 5.3E-13 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CVS42_RS06985 99afac1df77aa41efaa9ea1b83d7ffc1 546 SUPERFAMILY SSF58104 242 545 1.7E-78 T 29-03-2018 CVS42_RS06985 99afac1df77aa41efaa9ea1b83d7ffc1 546 Pfam PF00672 HAMP domain 216 265 3.8E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS06985 99afac1df77aa41efaa9ea1b83d7ffc1 546 Gene3D G3DSA:1.20.120.30 23 189 8.7E-17 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CVS42_RS06985 99afac1df77aa41efaa9ea1b83d7ffc1 546 SMART SM00304 270 322 100.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS06985 99afac1df77aa41efaa9ea1b83d7ffc1 546 SMART SM00304 215 269 5.3E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS06985 99afac1df77aa41efaa9ea1b83d7ffc1 546 SMART SM00283 284 545 1.2E-82 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS08315 47dad43506d5c3cdf5619b56f1928014 78 Pfam PF06667 Phage shock protein B 7 76 4.8E-29 T 29-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 CVS42_RS08315 47dad43506d5c3cdf5619b56f1928014 78 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 7 77 1.6E-25 T 29-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 CVS42_RS07875 50b7847ef0663fe151426deb6a89234c 155 Pfam PF14267 Domain of unknown function (DUF4357) 93 147 2.1E-18 T 29-03-2018 IPR025579 Domain of unknown function DUF4357 CVS42_RS18430 b1e56c1765978fc0c5e199a33d9682fa 438 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 177 429 1.1E-10 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS18430 b1e56c1765978fc0c5e199a33d9682fa 438 Gene3D G3DSA:3.60.10.10 171 437 2.7E-29 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS18430 b1e56c1765978fc0c5e199a33d9682fa 438 SUPERFAMILY SSF56219 172 436 1.7E-58 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS05555 89b1ff58328faa14fed50fb8462d0829 246 SUPERFAMILY SSF75708 34 245 1.44E-67 T 29-03-2018 CVS42_RS05555 89b1ff58328faa14fed50fb8462d0829 246 Gene3D G3DSA:1.20.5.590 38 61 2.2E-6 T 29-03-2018 CVS42_RS05555 89b1ff58328faa14fed50fb8462d0829 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 43 246 1.9E-78 T 29-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 CVS42_RS05555 89b1ff58328faa14fed50fb8462d0829 246 Gene3D G3DSA:1.10.287.500 65 196 1.1E-17 T 29-03-2018 CVS42_RS05555 89b1ff58328faa14fed50fb8462d0829 246 PIRSF PIRSF002884 20 246 4.8E-84 T 29-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 CVS42_RS17190 6544b9396e6f5b967d12d30812bcb19d 120 Gene3D G3DSA:2.60.40.1470 3 120 8.2E-37 T 29-03-2018 IPR007474 ApaG domain CVS42_RS17190 6544b9396e6f5b967d12d30812bcb19d 120 Pfam PF04379 ApaG domain 18 97 3.9E-29 T 29-03-2018 IPR007474 ApaG domain CVS42_RS17190 6544b9396e6f5b967d12d30812bcb19d 120 SUPERFAMILY SSF110069 5 120 2.88E-40 T 29-03-2018 IPR007474 ApaG domain CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 Pfam PF01842 ACT domain 324 381 1.9E-9 T 29-03-2018 IPR002912 ACT domain CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 Gene3D G3DSA:3.40.50.720 465 635 2.5E-30 T 29-03-2018 CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 Pfam PF00696 Amino acid kinase family 2 284 1.7E-41 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 Gene3D G3DSA:3.30.360.10 636 793 6.5E-50 T 29-03-2018 CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 Gene3D G3DSA:3.40.1160.10 1 288 4.3E-57 T 29-03-2018 CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 PIRSF PIRSF000727 1 817 0.0 T 29-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 Gene3D G3DSA:3.30.70.260 289 383 5.9E-22 T 29-03-2018 CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 Pfam PF13840 ACT domain 394 456 2.1E-7 T 29-03-2018 IPR027795 GATS-like ACT domain CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 SUPERFAMILY SSF55021 303 381 9.16E-20 T 29-03-2018 CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 SUPERFAMILY SSF55347 614 797 1.37E-48 T 29-03-2018 CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 1.3E-25 T 29-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 SUPERFAMILY SSF55021 384 476 6.54E-22 T 29-03-2018 CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 29-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 SUPERFAMILY SSF51735 463 636 1.09E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 Gene3D G3DSA:3.30.70.260 384 464 2.0E-19 T 29-03-2018 CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 2.0E-130 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 SUPERFAMILY SSF53633 1 298 2.56E-72 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS14645 150f4d8671f5030f6df34b43080bfb4f 819 Pfam PF00742 Homoserine dehydrogenase 614 810 2.2E-46 T 29-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CVS42_RS17995 55cee926a61d94566c0da1b161cf5c57 336 Gene3D G3DSA:1.10.150.210 144 177 2.0E-23 T 29-03-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 CVS42_RS17995 55cee926a61d94566c0da1b161cf5c57 336 Gene3D G3DSA:3.40.50.1000 178 323 8.4E-28 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS17995 55cee926a61d94566c0da1b161cf5c57 336 SUPERFAMILY SSF56784 110 320 1.25E-44 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS17995 55cee926a61d94566c0da1b161cf5c57 336 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 108 323 4.2E-77 T 29-03-2018 CVS42_RS17995 55cee926a61d94566c0da1b161cf5c57 336 Gene3D G3DSA:3.30.70.260 113 143 9.7E-4 T 29-03-2018 CVS42_RS17995 55cee926a61d94566c0da1b161cf5c57 336 Pfam PF12710 haloacid dehalogenase-like hydrolase 123 288 1.2E-19 T 29-03-2018 CVS42_RS17995 55cee926a61d94566c0da1b161cf5c57 336 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 120 288 2.2E-23 T 29-03-2018 CVS42_RS14570 0a45ba2dfdbcb0b9d181820dbea05b04 212 SUPERFAMILY SSF48498 84 202 9.69E-16 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CVS42_RS14570 0a45ba2dfdbcb0b9d181820dbea05b04 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 3.8E-15 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS14570 0a45ba2dfdbcb0b9d181820dbea05b04 212 Gene3D G3DSA:1.10.357.10 1 210 1.5E-40 T 29-03-2018 CVS42_RS14570 0a45ba2dfdbcb0b9d181820dbea05b04 212 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 203 1.8E-18 T 29-03-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 CVS42_RS14570 0a45ba2dfdbcb0b9d181820dbea05b04 212 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CVS42_RS14570 0a45ba2dfdbcb0b9d181820dbea05b04 212 SUPERFAMILY SSF46689 1 79 4.99E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS14570 0a45ba2dfdbcb0b9d181820dbea05b04 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 7.1E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS14570 0a45ba2dfdbcb0b9d181820dbea05b04 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 7.1E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS10610 dc43cbcec2d4ceb32cece87e306a1add 468 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 456 166.144 T 29-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CVS42_RS10610 dc43cbcec2d4ceb32cece87e306a1add 468 Pfam PF12390 Selenocysteine synthase N terminal 14 52 1.8E-8 T 29-03-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CVS42_RS10610 dc43cbcec2d4ceb32cece87e306a1add 468 Pfam PF03841 L-seryl-tRNA selenium transferase 86 438 1.7E-94 T 29-03-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CVS42_RS10610 dc43cbcec2d4ceb32cece87e306a1add 468 Gene3D G3DSA:3.40.640.10 38 344 9.7E-24 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS10610 dc43cbcec2d4ceb32cece87e306a1add 468 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 14 452 3.3E-152 T 29-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CVS42_RS10610 dc43cbcec2d4ceb32cece87e306a1add 468 SUPERFAMILY SSF53383 77 453 3.8E-35 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS09960 682ef785650f2df3ac94cb6bc039d009 436 Gene3D G3DSA:1.10.443.10 197 425 1.7E-23 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS09960 682ef785650f2df3ac94cb6bc039d009 436 Gene3D G3DSA:1.10.150.130 42 196 5.7E-18 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CVS42_RS09960 682ef785650f2df3ac94cb6bc039d009 436 SUPERFAMILY SSF56349 148 417 4.71E-26 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CVS42_RS09960 682ef785650f2df3ac94cb6bc039d009 436 SUPERFAMILY SSF56349 47 103 4.71E-26 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CVS42_RS09960 682ef785650f2df3ac94cb6bc039d009 436 Pfam PF00589 Phage integrase family 214 409 3.4E-10 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS12695 679aa50f87b11ea926bd5a0c22a782e4 137 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CVS42_RS12695 679aa50f87b11ea926bd5a0c22a782e4 137 SUPERFAMILY SSF54593 1 130 7.25E-37 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS12695 679aa50f87b11ea926bd5a0c22a782e4 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 3.5E-26 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CVS42_RS12695 679aa50f87b11ea926bd5a0c22a782e4 137 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 3.1E-67 T 29-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CVS42_RS12695 679aa50f87b11ea926bd5a0c22a782e4 137 Gene3D G3DSA:3.10.180.10 1 135 4.1E-38 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS08385 20854042f5a511ed1689f19b716e9aa6 554 Gene3D G3DSA:3.30.300.30 427 544 1.4E-14 T 29-03-2018 CVS42_RS08385 20854042f5a511ed1689f19b716e9aa6 554 SUPERFAMILY SSF56801 12 540 3.14E-115 T 29-03-2018 CVS42_RS08385 20854042f5a511ed1689f19b716e9aa6 554 Pfam PF00501 AMP-binding enzyme 20 432 6.9E-87 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CVS42_RS08385 20854042f5a511ed1689f19b716e9aa6 554 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 29-03-2018 IPR020845 AMP-binding, conserved site CVS42_RS08385 20854042f5a511ed1689f19b716e9aa6 554 Gene3D G3DSA:2.30.38.10 348 425 3.5E-17 T 29-03-2018 CVS42_RS08385 20854042f5a511ed1689f19b716e9aa6 554 Gene3D G3DSA:3.40.50.980 176 347 9.0E-37 T 29-03-2018 CVS42_RS08385 20854042f5a511ed1689f19b716e9aa6 554 Gene3D G3DSA:3.40.50.980 10 175 1.5E-32 T 29-03-2018 CVS42_RS18890 0cde1029c9922fa017b193b78449b1f7 130 PIRSF PIRSF039090 2 130 3.3E-41 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CVS42_RS18890 0cde1029c9922fa017b193b78449b1f7 130 SUPERFAMILY SSF101116 11 127 6.15E-35 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CVS42_RS18890 0cde1029c9922fa017b193b78449b1f7 130 Gene3D G3DSA:1.20.120.340 2 129 1.2E-38 T 29-03-2018 CVS42_RS18890 0cde1029c9922fa017b193b78449b1f7 130 Pfam PF02561 Flagellar protein FliS 10 125 6.5E-34 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CVS42_RS18890 0cde1029c9922fa017b193b78449b1f7 130 TIGRFAM TIGR00208 fliS: flagellar protein FliS 5 125 7.9E-22 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CVS42_RS02940 26aa61222edc92d35900b5007c3f2fa1 105 Gene3D G3DSA:2.40.50.200 25 105 9.8E-6 T 29-03-2018 CVS42_RS02940 26aa61222edc92d35900b5007c3f2fa1 105 SUPERFAMILY SSF101756 31 101 1.2E-8 T 29-03-2018 IPR005220 Bacterial OB-fold CVS42_RS09645 8473bff67f09047b02862ba1c8116e38 213 Gene3D G3DSA:3.40.630.30 45 199 2.4E-13 T 29-03-2018 CVS42_RS09645 8473bff67f09047b02862ba1c8116e38 213 Pfam PF00583 Acetyltransferase (GNAT) family 74 175 3.1E-6 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS09645 8473bff67f09047b02862ba1c8116e38 213 SUPERFAMILY SSF55729 55 175 9.39E-13 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS13855 619702e683e1fb76594d4a0c73b44af7 216 SUPERFAMILY SSF52540 19 204 8.7E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS13855 619702e683e1fb76594d4a0c73b44af7 216 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS13855 619702e683e1fb76594d4a0c73b44af7 216 Pfam PF00005 ABC transporter 22 168 7.0E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS13855 619702e683e1fb76594d4a0c73b44af7 216 SMART SM00382 26 214 4.1E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS13855 619702e683e1fb76594d4a0c73b44af7 216 Gene3D G3DSA:3.40.50.300 7 209 6.9E-44 T 29-03-2018 CVS42_RS15905 671b2130bb4aea488a119dc9420556c5 383 Gene3D G3DSA:3.30.300.10 246 383 6.0E-50 T 29-03-2018 CVS42_RS15905 671b2130bb4aea488a119dc9420556c5 383 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 4 380 4.3E-195 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CVS42_RS15905 671b2130bb4aea488a119dc9420556c5 383 Pfam PF02772 S-adenosylmethionine synthetase, central domain 113 231 8.2E-43 T 29-03-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CVS42_RS15905 671b2130bb4aea488a119dc9420556c5 383 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 115 125 - T 29-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CVS42_RS15905 671b2130bb4aea488a119dc9420556c5 383 PIRSF PIRSF000497 1 382 4.5E-175 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CVS42_RS15905 671b2130bb4aea488a119dc9420556c5 383 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 381 58.846 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CVS42_RS15905 671b2130bb4aea488a119dc9420556c5 383 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 100 1.5E-44 T 29-03-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CVS42_RS15905 671b2130bb4aea488a119dc9420556c5 383 Gene3D G3DSA:3.30.300.10 10 132 2.9E-47 T 29-03-2018 CVS42_RS15905 671b2130bb4aea488a119dc9420556c5 383 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 29-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CVS42_RS15905 671b2130bb4aea488a119dc9420556c5 383 Gene3D G3DSA:3.30.300.10 133 233 5.3E-41 T 29-03-2018 CVS42_RS15905 671b2130bb4aea488a119dc9420556c5 383 SUPERFAMILY SSF55973 3 109 7.46E-49 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CVS42_RS15905 671b2130bb4aea488a119dc9420556c5 383 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 3.1E-70 T 29-03-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CVS42_RS15905 671b2130bb4aea488a119dc9420556c5 383 SUPERFAMILY SSF55973 111 232 1.02E-48 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CVS42_RS15905 671b2130bb4aea488a119dc9420556c5 383 SUPERFAMILY SSF55973 233 382 1.37E-71 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CVS42_RS20135 7f655a329fca7b87a4c1a9c5d88e5596 414 SUPERFAMILY SSF47384 200 276 7.65E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS20135 7f655a329fca7b87a4c1a9c5d88e5596 414 Gene3D G3DSA:3.30.565.10 288 402 1.5E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS20135 7f655a329fca7b87a4c1a9c5d88e5596 414 SMART SM00388 212 278 1.3E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS20135 7f655a329fca7b87a4c1a9c5d88e5596 414 Gene3D G3DSA:1.10.287.130 203 274 1.9E-5 T 29-03-2018 CVS42_RS20135 7f655a329fca7b87a4c1a9c5d88e5596 414 SUPERFAMILY SSF55874 285 389 1.36E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS20135 7f655a329fca7b87a4c1a9c5d88e5596 414 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 277 1.9E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS13750 4ccfc05d38cb685521e21077127f7ffd 548 Gene3D G3DSA:2.30.38.10 369 444 1.0E-20 T 29-03-2018 CVS42_RS13750 4ccfc05d38cb685521e21077127f7ffd 548 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 6 540 1.8E-221 T 29-03-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 CVS42_RS13750 4ccfc05d38cb685521e21077127f7ffd 548 SUPERFAMILY SSF56801 6 545 4.97E-128 T 29-03-2018 CVS42_RS13750 4ccfc05d38cb685521e21077127f7ffd 548 Gene3D G3DSA:3.30.300.30 445 548 2.9E-25 T 29-03-2018 CVS42_RS13750 4ccfc05d38cb685521e21077127f7ffd 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 204 215 - T 29-03-2018 IPR020845 AMP-binding, conserved site CVS42_RS13750 4ccfc05d38cb685521e21077127f7ffd 548 Pfam PF00501 AMP-binding enzyme 34 450 2.3E-75 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CVS42_RS13750 4ccfc05d38cb685521e21077127f7ffd 548 Gene3D G3DSA:3.40.50.980 210 367 2.6E-29 T 29-03-2018 CVS42_RS13750 4ccfc05d38cb685521e21077127f7ffd 548 Gene3D G3DSA:3.40.50.980 26 209 1.1E-31 T 29-03-2018 CVS42_RS13750 4ccfc05d38cb685521e21077127f7ffd 548 Pfam PF13193 AMP-binding enzyme C-terminal domain 459 533 6.9E-12 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CVS42_RS00775 c2777a71321463bfdd7e5903ad82c652 285 SUPERFAMILY SSF53850 8 241 1.81E-10 T 29-03-2018 CVS42_RS12345 adf8dacacc841909640baba09ac97633 451 Gene3D G3DSA:1.10.287.130 216 287 8.9E-8 T 29-03-2018 CVS42_RS12345 adf8dacacc841909640baba09ac97633 451 Gene3D G3DSA:3.30.565.10 295 450 1.5E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS12345 adf8dacacc841909640baba09ac97633 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 448 9.2E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS12345 adf8dacacc841909640baba09ac97633 451 SUPERFAMILY SSF55874 295 448 5.24E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS12345 adf8dacacc841909640baba09ac97633 451 SUPERFAMILY SSF47384 209 291 1.96E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS12345 adf8dacacc841909640baba09ac97633 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 289 1.4E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS12345 adf8dacacc841909640baba09ac97633 451 SMART SM00387 339 450 1.1E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS12345 adf8dacacc841909640baba09ac97633 451 Pfam PF08521 Two-component sensor kinase N-terminal 1 149 1.3E-39 T 29-03-2018 IPR013727 Two-component sensor kinase, N-terminal CVS42_RS12345 adf8dacacc841909640baba09ac97633 451 SMART SM00388 226 291 2.9E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS12345 adf8dacacc841909640baba09ac97633 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 5.2E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS12345 adf8dacacc841909640baba09ac97633 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 5.2E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS12345 adf8dacacc841909640baba09ac97633 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 404 5.2E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS19935 69c3bd69af94aac39c9d6c3a0a599415 238 PRINTS PR00107 Phosphocarrier protein signature 204 221 3.7E-11 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS19935 69c3bd69af94aac39c9d6c3a0a599415 238 PRINTS PR00107 Phosphocarrier protein signature 164 180 3.7E-11 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS19935 69c3bd69af94aac39c9d6c3a0a599415 238 PRINTS PR00107 Phosphocarrier protein signature 189 204 3.7E-11 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS19935 69c3bd69af94aac39c9d6c3a0a599415 238 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 123 8.0E-32 T 29-03-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain CVS42_RS19935 69c3bd69af94aac39c9d6c3a0a599415 238 Gene3D G3DSA:3.30.1340.10 153 238 7.1E-21 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS19935 69c3bd69af94aac39c9d6c3a0a599415 238 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 156 230 1.4E-16 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS19935 69c3bd69af94aac39c9d6c3a0a599415 238 Gene3D G3DSA:3.40.50.510 1 145 2.9E-34 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CVS42_RS19935 69c3bd69af94aac39c9d6c3a0a599415 238 Pfam PF00381 PTS HPr component phosphorylation site 156 231 3.9E-19 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS19935 69c3bd69af94aac39c9d6c3a0a599415 238 SUPERFAMILY SSF55594 153 238 5.76E-20 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS19935 69c3bd69af94aac39c9d6c3a0a599415 238 Pfam PF03610 PTS system fructose IIA component 3 117 7.7E-20 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CVS42_RS19935 69c3bd69af94aac39c9d6c3a0a599415 238 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 164 171 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CVS42_RS19935 69c3bd69af94aac39c9d6c3a0a599415 238 SUPERFAMILY SSF53062 1 125 9.29E-31 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CVS42_RS07930 5a6350713bc5185e7c8fc9c7645f4589 93 Gene3D G3DSA:1.10.10.10 39 92 2.1E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS07930 5a6350713bc5185e7c8fc9c7645f4589 93 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 38 87 8.4E-16 T 29-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CVS42_RS08285 11dd641846987f381117aaac3f894149 332 SMART SM00382 32 235 3.1E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS08285 11dd641846987f381117aaac3f894149 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 323 4.3E-22 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CVS42_RS08285 11dd641846987f381117aaac3f894149 332 Gene3D G3DSA:3.40.50.300 1 332 2.3E-56 T 29-03-2018 CVS42_RS08285 11dd641846987f381117aaac3f894149 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 7.6E-16 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CVS42_RS08285 11dd641846987f381117aaac3f894149 332 Pfam PF00005 ABC transporter 24 187 3.2E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS08285 11dd641846987f381117aaac3f894149 332 SUPERFAMILY SSF52540 3 269 2.71E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS12825 53202ffeffbccdca5f931577ffcec80e 326 Pfam PF00005 ABC transporter 24 180 1.2E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS12825 53202ffeffbccdca5f931577ffcec80e 326 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS12825 53202ffeffbccdca5f931577ffcec80e 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 1.3E-20 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CVS42_RS12825 53202ffeffbccdca5f931577ffcec80e 326 SMART SM00382 32 238 9.9E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS12825 53202ffeffbccdca5f931577ffcec80e 326 Gene3D G3DSA:3.40.50.300 1 326 1.4E-73 T 29-03-2018 CVS42_RS12825 53202ffeffbccdca5f931577ffcec80e 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 3.4E-25 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CVS42_RS12825 53202ffeffbccdca5f931577ffcec80e 326 SUPERFAMILY SSF52540 33 302 3.82E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11780 7880037eee2c02dc08c05d1d3d8a5852 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 9.7E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS11780 7880037eee2c02dc08c05d1d3d8a5852 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 365 9.7E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS11780 7880037eee2c02dc08c05d1d3d8a5852 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 9.7E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS11780 7880037eee2c02dc08c05d1d3d8a5852 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 379 9.7E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS11780 7880037eee2c02dc08c05d1d3d8a5852 441 Pfam PF00672 HAMP domain 162 207 6.1E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS11780 7880037eee2c02dc08c05d1d3d8a5852 441 Gene3D G3DSA:1.10.287.130 201 255 2.9E-8 T 29-03-2018 CVS42_RS11780 7880037eee2c02dc08c05d1d3d8a5852 441 SMART SM00388 211 272 3.5E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS11780 7880037eee2c02dc08c05d1d3d8a5852 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 423 2.5E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS11780 7880037eee2c02dc08c05d1d3d8a5852 441 SUPERFAMILY SSF47384 196 272 3.14E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS11780 7880037eee2c02dc08c05d1d3d8a5852 441 SUPERFAMILY SSF55874 262 425 2.62E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS11780 7880037eee2c02dc08c05d1d3d8a5852 441 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 271 5.2E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS11780 7880037eee2c02dc08c05d1d3d8a5852 441 Gene3D G3DSA:3.30.565.10 256 425 4.9E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS11780 7880037eee2c02dc08c05d1d3d8a5852 441 SMART SM00387 316 425 5.0E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS11780 7880037eee2c02dc08c05d1d3d8a5852 441 SMART SM00304 158 210 6.0E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS17555 22f808b6b830280240cfa6233030795c 361 Gene3D G3DSA:3.40.718.10 1 361 9.0E-129 T 29-03-2018 CVS42_RS17555 22f808b6b830280240cfa6233030795c 361 SMART SM01329 5 357 3.2E-200 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CVS42_RS17555 22f808b6b830280240cfa6233030795c 361 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 246 265 - T 29-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CVS42_RS17555 22f808b6b830280240cfa6233030795c 361 SUPERFAMILY SSF53659 2 361 3.42E-122 T 29-03-2018 CVS42_RS17555 22f808b6b830280240cfa6233030795c 361 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 357 2.3E-133 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CVS42_RS17555 22f808b6b830280240cfa6233030795c 361 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 361 50.682 T 29-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CVS42_RS17555 22f808b6b830280240cfa6233030795c 361 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 353 2.2E-164 T 29-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CVS42_RS16480 29088aeea58fb52c38b05e45cab13186 492 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 11 490 4.7E-85 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CVS42_RS16480 29088aeea58fb52c38b05e45cab13186 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 240 259 1.5E-39 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CVS42_RS16480 29088aeea58fb52c38b05e45cab13186 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 327 346 1.5E-39 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CVS42_RS16480 29088aeea58fb52c38b05e45cab13186 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 397 418 1.5E-39 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CVS42_RS16480 29088aeea58fb52c38b05e45cab13186 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 287 303 1.5E-39 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CVS42_RS16480 29088aeea58fb52c38b05e45cab13186 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 144 164 1.5E-39 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CVS42_RS16480 29088aeea58fb52c38b05e45cab13186 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 260 279 1.5E-39 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CVS42_RS16480 29088aeea58fb52c38b05e45cab13186 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 442 460 1.5E-39 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CVS42_RS16480 29088aeea58fb52c38b05e45cab13186 492 SUPERFAMILY SSF55486 3 491 2.93E-119 T 29-03-2018 CVS42_RS16480 29088aeea58fb52c38b05e45cab13186 492 PIRSF PIRSF006615 1 492 1.5E-191 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CVS42_RS16480 29088aeea58fb52c38b05e45cab13186 492 Gene3D G3DSA:1.10.1370.10 52 490 1.5E-28 T 29-03-2018 CVS42_RS17450 32f572ad94ae8c7e13e466a970efab12 284 SMART SM00382 134 266 1.8E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS17450 32f572ad94ae8c7e13e466a970efab12 284 Pfam PF01695 IstB-like ATP binding protein 136 256 5.8E-13 T 29-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CVS42_RS17450 32f572ad94ae8c7e13e466a970efab12 284 Gene3D G3DSA:3.40.50.300 4 268 3.4E-16 T 29-03-2018 CVS42_RS17450 32f572ad94ae8c7e13e466a970efab12 284 SUPERFAMILY SSF52540 96 257 5.72E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS14090 7c5798035c29841f70f1f3f90d088bb1 466 SUPERFAMILY SSF50249 15 101 1.98E-14 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS14090 7c5798035c29841f70f1f3f90d088bb1 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 5.4E-81 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS14090 7c5798035c29841f70f1f3f90d088bb1 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 466 45.941 T 29-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CVS42_RS14090 7c5798035c29841f70f1f3f90d088bb1 466 Gene3D G3DSA:2.40.50.140 7 108 2.1E-15 T 29-03-2018 CVS42_RS14090 7c5798035c29841f70f1f3f90d088bb1 466 Gene3D G3DSA:3.30.930.10 128 462 2.5E-95 T 29-03-2018 CVS42_RS14090 7c5798035c29841f70f1f3f90d088bb1 466 Pfam PF01336 OB-fold nucleic acid binding domain 21 99 5.2E-9 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CVS42_RS14090 7c5798035c29841f70f1f3f90d088bb1 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 5.5E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS14090 7c5798035c29841f70f1f3f90d088bb1 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 5.5E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS14090 7c5798035c29841f70f1f3f90d088bb1 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 5.5E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS14090 7c5798035c29841f70f1f3f90d088bb1 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 5.5E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS14090 7c5798035c29841f70f1f3f90d088bb1 466 SUPERFAMILY SSF55681 96 463 8.5E-98 T 29-03-2018 CVS42_RS14090 7c5798035c29841f70f1f3f90d088bb1 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 6.3E-205 T 29-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CVS42_RS02675 927f94f2e1056b36e3046cc26f226d11 519 SUPERFAMILY SSF58104 239 519 2.49E-64 T 29-03-2018 CVS42_RS02675 927f94f2e1056b36e3046cc26f226d11 519 SMART SM00283 257 518 2.9E-63 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS02675 927f94f2e1056b36e3046cc26f226d11 519 Gene3D G3DSA:3.40.50.10600 2 126 1.1E-26 T 29-03-2018 CVS42_RS02675 927f94f2e1056b36e3046cc26f226d11 519 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 485 7.1E-40 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS02675 927f94f2e1056b36e3046cc26f226d11 519 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 108 3.3E-10 T 29-03-2018 IPR000014 PAS domain CVS42_RS02675 927f94f2e1056b36e3046cc26f226d11 519 SUPERFAMILY SSF55785 19 113 8.03E-24 T 29-03-2018 IPR000014 PAS domain CVS42_RS02675 927f94f2e1056b36e3046cc26f226d11 519 Pfam PF08447 PAS fold 29 113 1.4E-12 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CVS42_RS02675 927f94f2e1056b36e3046cc26f226d11 519 Gene3D G3DSA:1.10.287.950 185 293 0.0043 T 29-03-2018 CVS42_RS02675 927f94f2e1056b36e3046cc26f226d11 519 Gene3D G3DSA:1.10.287.950 294 519 4.7E-52 T 29-03-2018 CVS42_RS05690 f82607e39d7f8be72adede3f2d22a5a3 255 Gene3D G3DSA:3.40.930.10 115 249 7.4E-21 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CVS42_RS05690 f82607e39d7f8be72adede3f2d22a5a3 255 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 125 242 1.7E-19 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CVS42_RS05690 f82607e39d7f8be72adede3f2d22a5a3 255 Pfam PF00381 PTS HPr component phosphorylation site 4 76 2.4E-6 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS05690 f82607e39d7f8be72adede3f2d22a5a3 255 PIRSF PIRSF029195 1 254 1.8E-27 T 29-03-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 CVS42_RS05690 f82607e39d7f8be72adede3f2d22a5a3 255 SUPERFAMILY SSF55594 1 79 2.62E-9 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS05690 f82607e39d7f8be72adede3f2d22a5a3 255 Gene3D G3DSA:3.30.1340.10 1 80 2.4E-9 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS05690 f82607e39d7f8be72adede3f2d22a5a3 255 SUPERFAMILY SSF55804 121 244 5.1E-22 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CVS42_RS13060 db2d35c77940a1ffe2bb4eee37e4b33f 418 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 4 273 1.5E-90 T 29-03-2018 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase CVS42_RS13060 db2d35c77940a1ffe2bb4eee37e4b33f 418 SUPERFAMILY SSF53756 16 314 9.03E-10 T 29-03-2018 CVS42_RS13060 db2d35c77940a1ffe2bb4eee37e4b33f 418 Gene3D G3DSA:3.40.50.2000 148 316 7.1E-16 T 29-03-2018 CVS42_RS13060 db2d35c77940a1ffe2bb4eee37e4b33f 418 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 211 314 4.9E-6 T 29-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CVS42_RS04075 03f8a02a7c7373d3b0ff89a175f5350e 342 SUPERFAMILY SSF81345 4 337 6.15E-81 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CVS42_RS04075 03f8a02a7c7373d3b0ff89a175f5350e 342 Gene3D G3DSA:1.10.3470.10 3 342 7.3E-74 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CVS42_RS04075 03f8a02a7c7373d3b0ff89a175f5350e 342 Pfam PF01032 FecCD transport family 16 337 3.2E-90 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CVS42_RS18045 b97292beccbc64de9e2a52f9bf873568 205 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 7.2E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS18045 b97292beccbc64de9e2a52f9bf873568 205 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 29 4.1E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS18045 b97292beccbc64de9e2a52f9bf873568 205 SUPERFAMILY SSF54523 9 111 1.8E-13 T 29-03-2018 CVS42_RS18045 b97292beccbc64de9e2a52f9bf873568 205 Gene3D G3DSA:3.30.700.10 9 162 2.8E-15 T 29-03-2018 CVS42_RS02845 f86a8b926160da974bdbd315ae6f8785 377 Gene3D G3DSA:3.30.1150.10 278 376 2.2E-13 T 29-03-2018 CVS42_RS02845 f86a8b926160da974bdbd315ae6f8785 377 TIGRFAM TIGR02794 tolA_full: protein TolA 11 375 3.2E-70 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CVS42_RS02845 f86a8b926160da974bdbd315ae6f8785 377 SUPERFAMILY SSF74653 287 374 8.24E-19 T 29-03-2018 CVS42_RS02845 f86a8b926160da974bdbd315ae6f8785 377 Pfam PF06519 TolA C-terminal 279 372 1.8E-23 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CVS42_RS04285 984a7c35eb4ba30bc2cb5f46d503eded 69 Pfam PF06004 Bacterial protein of unknown function (DUF903) 20 68 7.5E-22 T 29-03-2018 IPR010305 Protein of unknown function DUF903 CVS42_RS04285 984a7c35eb4ba30bc2cb5f46d503eded 69 Gene3D G3DSA:2.30.30.100 18 68 3.9E-21 T 29-03-2018 CVS42_RS04285 984a7c35eb4ba30bc2cb5f46d503eded 69 SUPERFAMILY SSF50182 18 68 3.38E-17 T 29-03-2018 IPR010920 LSM domain CVS42_RS01995 d757a683a8f6a0f31b98c37118370377 159 PIRSF PIRSF002560 1 157 3.9E-72 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CVS42_RS01995 d757a683a8f6a0f31b98c37118370377 159 Pfam PF00210 Ferritin-like domain 8 144 6.1E-39 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CVS42_RS01995 d757a683a8f6a0f31b98c37118370377 159 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 3.3E-79 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CVS42_RS01995 d757a683a8f6a0f31b98c37118370377 159 Gene3D G3DSA:1.20.1260.10 1 153 2.9E-39 T 29-03-2018 IPR012347 Ferritin-related CVS42_RS01995 d757a683a8f6a0f31b98c37118370377 159 PRINTS PR00601 Bacterioferritin signature 23 43 1.3E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CVS42_RS01995 d757a683a8f6a0f31b98c37118370377 159 PRINTS PR00601 Bacterioferritin signature 107 127 1.3E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CVS42_RS01995 d757a683a8f6a0f31b98c37118370377 159 PRINTS PR00601 Bacterioferritin signature 3 22 1.3E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CVS42_RS01995 d757a683a8f6a0f31b98c37118370377 159 PRINTS PR00601 Bacterioferritin signature 65 85 1.3E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CVS42_RS01995 d757a683a8f6a0f31b98c37118370377 159 PRINTS PR00601 Bacterioferritin signature 128 149 1.3E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CVS42_RS01995 d757a683a8f6a0f31b98c37118370377 159 PRINTS PR00601 Bacterioferritin signature 86 106 1.3E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CVS42_RS01995 d757a683a8f6a0f31b98c37118370377 159 PRINTS PR00601 Bacterioferritin signature 44 64 1.3E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CVS42_RS01995 d757a683a8f6a0f31b98c37118370377 159 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CVS42_RS01995 d757a683a8f6a0f31b98c37118370377 159 SUPERFAMILY SSF47240 1 154 4.38E-54 T 29-03-2018 IPR009078 Ferritin-like superfamily CVS42_RS01925 05e34c20123a53ba8b159bdc0cb5e938 156 SUPERFAMILY SSF46785 3 63 2.93E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS01925 05e34c20123a53ba8b159bdc0cb5e938 156 Gene3D G3DSA:3.30.70.920 56 141 2.5E-19 T 29-03-2018 CVS42_RS01925 05e34c20123a53ba8b159bdc0cb5e938 156 SMART SM00344 4 113 8.1E-26 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CVS42_RS01925 05e34c20123a53ba8b159bdc0cb5e938 156 Gene3D G3DSA:1.10.10.10 1 55 2.6E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS01925 05e34c20123a53ba8b159bdc0cb5e938 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 5.1E-15 T 29-03-2018 CVS42_RS01925 05e34c20123a53ba8b159bdc0cb5e938 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 4.5E-11 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CVS42_RS01925 05e34c20123a53ba8b159bdc0cb5e938 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 4.5E-11 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CVS42_RS01925 05e34c20123a53ba8b159bdc0cb5e938 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 4.5E-11 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CVS42_RS01925 05e34c20123a53ba8b159bdc0cb5e938 156 SUPERFAMILY SSF54909 66 148 3.22E-15 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CVS42_RS01925 05e34c20123a53ba8b159bdc0cb5e938 156 Pfam PF01037 Lrp/AsnC ligand binding domain 71 143 2.7E-14 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CVS42_RS18865 efa810bd9432b28d3c487faacdee6a49 285 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 29-03-2018 IPR000540 Flagellar motor protein MotA, conserved site CVS42_RS18865 efa810bd9432b28d3c487faacdee6a49 285 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 234 9.5E-13 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CVS42_RS18865 efa810bd9432b28d3c487faacdee6a49 285 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 2.8E-117 T 29-03-2018 IPR022522 Flagellar motor stator, MotA CVS42_RS12860 f4f6a72e1f588a6139f7793a7981cc7d 588 SUPERFAMILY SSF55261 289 419 4.14E-46 T 29-03-2018 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CVS42_RS12860 f4f6a72e1f588a6139f7793a7981cc7d 588 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 583 33.122 T 29-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CVS42_RS12860 f4f6a72e1f588a6139f7793a7981cc7d 588 Pfam PF01336 OB-fold nucleic acid binding domain 19 101 1.4E-15 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CVS42_RS12860 f4f6a72e1f588a6139f7793a7981cc7d 588 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 3.1E-260 T 29-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CVS42_RS12860 f4f6a72e1f588a6139f7793a7981cc7d 588 SUPERFAMILY SSF50249 1 105 4.0E-34 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS12860 f4f6a72e1f588a6139f7793a7981cc7d 588 Pfam PF02938 GAD domain 307 406 2.3E-32 T 29-03-2018 IPR029351 GAD domain Reactome: R-HSA-379726 CVS42_RS12860 f4f6a72e1f588a6139f7793a7981cc7d 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.2E-26 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS12860 f4f6a72e1f588a6139f7793a7981cc7d 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 473 489 1.2E-26 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS12860 f4f6a72e1f588a6139f7793a7981cc7d 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 517 531 1.2E-26 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS12860 f4f6a72e1f588a6139f7793a7981cc7d 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.2E-26 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS12860 f4f6a72e1f588a6139f7793a7981cc7d 588 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 557 1.7E-105 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS12860 f4f6a72e1f588a6139f7793a7981cc7d 588 Gene3D G3DSA:2.40.50.140 1 108 1.3E-25 T 29-03-2018 CVS42_RS12860 f4f6a72e1f588a6139f7793a7981cc7d 588 SUPERFAMILY SSF55681 108 287 7.08E-106 T 29-03-2018 CVS42_RS12860 f4f6a72e1f588a6139f7793a7981cc7d 588 SUPERFAMILY SSF55681 419 580 7.08E-106 T 29-03-2018 CVS42_RS12860 f4f6a72e1f588a6139f7793a7981cc7d 588 Gene3D G3DSA:3.30.930.10 131 340 1.1E-50 T 29-03-2018 CVS42_RS12860 f4f6a72e1f588a6139f7793a7981cc7d 588 Gene3D G3DSA:3.30.930.10 371 585 2.0E-48 T 29-03-2018 CVS42_RS10450 c93ff9ea3f76152fbcb846f4d25f5b02 266 Pfam PF03781 Sulfatase-modifying factor enzyme 1 42 263 3.9E-47 T 29-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 CVS42_RS10450 c93ff9ea3f76152fbcb846f4d25f5b02 266 SUPERFAMILY SSF56436 40 265 1.2E-58 T 29-03-2018 IPR016187 C-type lectin fold CVS42_RS10450 c93ff9ea3f76152fbcb846f4d25f5b02 266 Gene3D G3DSA:3.90.1580.10 28 92 1.5E-14 T 29-03-2018 CVS42_RS10450 c93ff9ea3f76152fbcb846f4d25f5b02 266 Gene3D G3DSA:3.90.1580.10 93 266 5.1E-42 T 29-03-2018 CVS42_RS10375 3e1342e84bc186332889a3aac61d0ac9 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 83 101 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CVS42_RS10375 3e1342e84bc186332889a3aac61d0ac9 391 Pfam PF00108 Thiolase, N-terminal domain 3 255 1.0E-83 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CVS42_RS10375 3e1342e84bc186332889a3aac61d0ac9 391 Gene3D G3DSA:3.40.47.10 1 258 1.7E-53 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS10375 3e1342e84bc186332889a3aac61d0ac9 391 PIRSF PIRSF000429 1 388 4.3E-108 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CVS42_RS10375 3e1342e84bc186332889a3aac61d0ac9 391 SUPERFAMILY SSF53901 266 386 6.83E-37 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS10375 3e1342e84bc186332889a3aac61d0ac9 391 Gene3D G3DSA:3.40.47.10 259 388 3.5E-23 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS10375 3e1342e84bc186332889a3aac61d0ac9 391 SUPERFAMILY SSF53901 2 262 5.26E-73 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS10375 3e1342e84bc186332889a3aac61d0ac9 391 Pfam PF02803 Thiolase, C-terminal domain 266 385 2.4E-39 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CVS42_RS10375 3e1342e84bc186332889a3aac61d0ac9 391 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CVS42_RS10375 3e1342e84bc186332889a3aac61d0ac9 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 5 385 5.5E-122 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CVS42_RS12400 ed1355e9e422f8e6c6fdb1efeb2de69d 617 SMART SM00465 21 102 8.4E-22 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CVS42_RS12400 ed1355e9e422f8e6c6fdb1efeb2de69d 617 Pfam PF02151 UvrB/uvrC motif 209 242 6.9E-8 T 29-03-2018 IPR001943 UVR domain GO:0005515 CVS42_RS12400 ed1355e9e422f8e6c6fdb1efeb2de69d 617 SUPERFAMILY SSF82771 21 104 7.19E-24 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CVS42_RS12400 ed1355e9e422f8e6c6fdb1efeb2de69d 617 SMART SM00278 594 613 5.3 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CVS42_RS12400 ed1355e9e422f8e6c6fdb1efeb2de69d 617 SMART SM00278 562 581 0.06 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CVS42_RS12400 ed1355e9e422f8e6c6fdb1efeb2de69d 617 SUPERFAMILY SSF47781 527 615 3.18E-24 T 29-03-2018 IPR010994 RuvA domain 2-like CVS42_RS12400 ed1355e9e422f8e6c6fdb1efeb2de69d 617 Pfam PF14520 Helix-hairpin-helix domain 563 614 2.6E-10 T 29-03-2018 CVS42_RS12400 ed1355e9e422f8e6c6fdb1efeb2de69d 617 Gene3D G3DSA:3.40.1440.10 10 105 1.0E-23 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CVS42_RS12400 ed1355e9e422f8e6c6fdb1efeb2de69d 617 SUPERFAMILY SSF46600 194 247 3.01E-13 T 29-03-2018 IPR001943 UVR domain GO:0005515 CVS42_RS12400 ed1355e9e422f8e6c6fdb1efeb2de69d 617 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 390 548 2.0E-45 T 29-03-2018 IPR001162 UvrC family homology region CVS42_RS12400 ed1355e9e422f8e6c6fdb1efeb2de69d 617 Gene3D G3DSA:1.10.150.20 574 617 1.1E-14 T 29-03-2018 CVS42_RS12400 ed1355e9e422f8e6c6fdb1efeb2de69d 617 Hamap MF_00203 UvrABC system protein C [uvrC]. 8 613 28.893 T 29-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CVS42_RS12400 ed1355e9e422f8e6c6fdb1efeb2de69d 617 Gene3D G3DSA:1.10.150.20 382 573 0.31 T 29-03-2018 CVS42_RS12400 ed1355e9e422f8e6c6fdb1efeb2de69d 617 Gene3D G3DSA:4.10.860.10 186 248 1.4E-14 T 29-03-2018 IPR001943 UVR domain GO:0005515 CVS42_RS12400 ed1355e9e422f8e6c6fdb1efeb2de69d 617 Pfam PF01541 GIY-YIG catalytic domain 22 97 1.2E-12 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CVS42_RS12400 ed1355e9e422f8e6c6fdb1efeb2de69d 617 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 14 595 1.7E-207 T 29-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CVS42_RS19060 0a53bf27022c5c296bddd3021610c04c 277 PIRSF PIRSF005917 1 277 6.2E-103 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CVS42_RS19060 0a53bf27022c5c296bddd3021610c04c 277 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 6 226 37.4 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CVS42_RS19060 0a53bf27022c5c296bddd3021610c04c 277 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 84 95 - T 29-03-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CVS42_RS19060 0a53bf27022c5c296bddd3021610c04c 277 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 198 1.0E-30 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CVS42_RS19060 0a53bf27022c5c296bddd3021610c04c 277 Gene3D G3DSA:3.30.950.10 115 229 2.6E-40 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CVS42_RS19060 0a53bf27022c5c296bddd3021610c04c 277 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 275 3.1E-94 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CVS42_RS19060 0a53bf27022c5c296bddd3021610c04c 277 SUPERFAMILY SSF53790 5 224 2.22E-82 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CVS42_RS19060 0a53bf27022c5c296bddd3021610c04c 277 Gene3D G3DSA:3.40.1010.10 5 114 1.5E-42 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CVS42_RS05535 ceafcbfe8afc0fcd687bdfca0bbef40a 474 SMART SM00962 255 448 1.4E-68 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CVS42_RS05535 ceafcbfe8afc0fcd687bdfca0bbef40a 474 SUPERFAMILY SSF52540 251 445 1.97E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS05535 ceafcbfe8afc0fcd687bdfca0bbef40a 474 SMART SM00382 254 395 2.4E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS05535 ceafcbfe8afc0fcd687bdfca0bbef40a 474 Gene3D G3DSA:3.40.50.300 252 449 5.8E-26 T 29-03-2018 CVS42_RS05535 ceafcbfe8afc0fcd687bdfca0bbef40a 474 Pfam PF00448 SRP54-type protein, GTPase domain 258 446 1.5E-40 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CVS42_RS05535 ceafcbfe8afc0fcd687bdfca0bbef40a 474 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 343 2.4E-88 T 29-03-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 CVS42_RS02950 451c88c3b789477efdebef4321dc2081 151 SUPERFAMILY SSF55811 5 141 2.57E-34 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CVS42_RS02950 451c88c3b789477efdebef4321dc2081 151 PRINTS PR00502 NUDIX hydrolase family signature 48 63 1.4E-8 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CVS42_RS02950 451c88c3b789477efdebef4321dc2081 151 PRINTS PR00502 NUDIX hydrolase family signature 34 48 1.4E-8 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CVS42_RS02950 451c88c3b789477efdebef4321dc2081 151 Gene3D G3DSA:3.90.79.10 2 135 5.8E-32 T 29-03-2018 CVS42_RS02950 451c88c3b789477efdebef4321dc2081 151 Pfam PF00293 NUDIX domain 7 128 3.6E-27 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CVS42_RS02950 451c88c3b789477efdebef4321dc2081 151 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CVS42_RS14365 b9114e58f5305ba2cf341b64fcd450d3 136 Gene3D G3DSA:1.10.287.1050 1 57 9.2E-21 T 29-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 CVS42_RS14365 b9114e58f5305ba2cf341b64fcd450d3 136 SUPERFAMILY SSF81273 2 58 1.77E-15 T 29-03-2018 CVS42_RS14365 b9114e58f5305ba2cf341b64fcd450d3 136 PIRSF PIRSF002096 1 136 1.6E-51 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CVS42_RS14365 b9114e58f5305ba2cf341b64fcd450d3 136 SUPERFAMILY SSF81273 93 136 1.41E-9 T 29-03-2018 CVS42_RS14365 b9114e58f5305ba2cf341b64fcd450d3 136 Gene3D G3DSA:4.10.430.10 96 136 6.7E-17 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CVS42_RS14365 b9114e58f5305ba2cf341b64fcd450d3 136 Pfam PF00816 H-NS histone family 45 129 4.2E-17 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CVS42_RS14365 b9114e58f5305ba2cf341b64fcd450d3 136 SMART SM00528 90 136 1.0E-18 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 TIGRFAM TIGR00131 gal_kin: galactokinase 5 381 1.1E-140 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 Pfam PF10509 Galactokinase galactose-binding signature 11 57 8.4E-23 T 29-03-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 Pfam PF00288 GHMP kinases N terminal domain 114 181 4.6E-13 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 PRINTS PR00473 Galactokinase signature 92 103 2.6E-29 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 PRINTS PR00473 Galactokinase signature 263 277 2.6E-29 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 PRINTS PR00473 Galactokinase signature 27 45 2.6E-29 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 PRINTS PR00473 Galactokinase signature 112 130 2.6E-29 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 PIRSF PIRSF000530 1 382 1.6E-122 T 29-03-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 SUPERFAMILY SSF55060 204 381 1.04E-49 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 Gene3D G3DSA:3.30.70.890 207 381 3.0E-53 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 29-03-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 29-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 PRINTS PR00959 Mevalonate kinase family signature 25 49 8.5E-45 T 29-03-2018 CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 PRINTS PR00959 Mevalonate kinase family signature 328 345 8.5E-45 T 29-03-2018 CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 PRINTS PR00959 Mevalonate kinase family signature 119 141 8.5E-45 T 29-03-2018 CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 PRINTS PR00959 Mevalonate kinase family signature 162 181 8.5E-45 T 29-03-2018 CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 Hamap MF_00246 Galactokinase [galK]. 25 381 42.56 T 29-03-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 Gene3D G3DSA:3.30.230.10 4 206 8.7E-61 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 Pfam PF08544 GHMP kinases C terminal 279 361 7.3E-13 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CVS42_RS00680 94944e35f17bb9ce2ab84df69c68b09f 382 SUPERFAMILY SSF54211 4 203 2.13E-65 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS05725 dc3b2c2ba9908f239621edbffda690f6 345 Gene3D G3DSA:3.40.50.2300 67 183 8.2E-34 T 29-03-2018 CVS42_RS05725 dc3b2c2ba9908f239621edbffda690f6 345 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 29-03-2018 CVS42_RS05725 dc3b2c2ba9908f239621edbffda690f6 345 SMART SM00354 10 80 2.7E-34 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS05725 dc3b2c2ba9908f239621edbffda690f6 345 Gene3D G3DSA:1.10.260.40 11 66 1.8E-24 T 29-03-2018 CVS42_RS05725 dc3b2c2ba9908f239621edbffda690f6 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 57 3.6E-20 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS05725 dc3b2c2ba9908f239621edbffda690f6 345 Gene3D G3DSA:3.40.50.2300 184 318 6.9E-39 T 29-03-2018 CVS42_RS05725 dc3b2c2ba9908f239621edbffda690f6 345 SUPERFAMILY SSF47413 10 68 4.22E-19 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS05725 dc3b2c2ba9908f239621edbffda690f6 345 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 71 341 5.5E-47 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CVS42_RS05725 dc3b2c2ba9908f239621edbffda690f6 345 SUPERFAMILY SSF53822 70 344 7.85E-64 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CVS42_RS05425 3b940775945958d435dd1460d0b0c863 322 Gene3D G3DSA:3.30.420.40 1 110 7.1E-17 T 29-03-2018 CVS42_RS05425 3b940775945958d435dd1460d0b0c863 322 SUPERFAMILY SSF53067 6 317 3.1E-63 T 29-03-2018 CVS42_RS05425 3b940775945958d435dd1460d0b0c863 322 Gene3D G3DSA:3.40.367.20 111 300 1.2E-30 T 29-03-2018 CVS42_RS05425 3b940775945958d435dd1460d0b0c863 322 TIGRFAM TIGR00749 glk: glucokinase 7 311 7.8E-130 T 29-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CVS42_RS05425 3b940775945958d435dd1460d0b0c863 322 Pfam PF02685 Glucokinase 7 316 8.2E-119 T 29-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CVS42_RS05425 3b940775945958d435dd1460d0b0c863 322 Hamap MF_00524 Glucokinase [glk]. 5 317 34.81 T 29-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CVS42_RS07835 243f7bb046d9fbdafbeb219e6e3b5096 210 Pfam PF01625 Peptide methionine sulfoxide reductase 42 195 2.4E-66 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CVS42_RS07835 243f7bb046d9fbdafbeb219e6e3b5096 210 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 42 195 2.3E-66 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CVS42_RS07835 243f7bb046d9fbdafbeb219e6e3b5096 210 SUPERFAMILY SSF55068 4 204 3.14E-81 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CVS42_RS07835 243f7bb046d9fbdafbeb219e6e3b5096 210 Gene3D G3DSA:3.30.1060.10 21 199 2.3E-77 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CVS42_RS07835 243f7bb046d9fbdafbeb219e6e3b5096 210 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 39 201 38.622 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CVS42_RS13600 619baf63aae8baae7d31820ceafac35e 139 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CVS42_RS13600 619baf63aae8baae7d31820ceafac35e 139 Pfam PF00460 Flagella basal body rod protein 7 32 1.1E-7 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CVS42_RS13600 619baf63aae8baae7d31820ceafac35e 139 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 91 136 1.2E-12 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CVS42_RS13600 619baf63aae8baae7d31820ceafac35e 139 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 1.4E-49 T 29-03-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 CVS42_RS20845 d6a2bea375d358c8ec05b7501e07bacb 153 Gene3D G3DSA:3.30.70.920 59 149 3.3E-22 T 29-03-2018 CVS42_RS20845 d6a2bea375d358c8ec05b7501e07bacb 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 54 1.8E-14 T 29-03-2018 CVS42_RS20845 d6a2bea375d358c8ec05b7501e07bacb 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.4E-12 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CVS42_RS20845 d6a2bea375d358c8ec05b7501e07bacb 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.4E-12 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CVS42_RS20845 d6a2bea375d358c8ec05b7501e07bacb 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.4E-12 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CVS42_RS20845 d6a2bea375d358c8ec05b7501e07bacb 153 SMART SM00344 7 114 4.0E-47 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CVS42_RS20845 d6a2bea375d358c8ec05b7501e07bacb 153 SUPERFAMILY SSF54909 68 150 6.44E-19 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CVS42_RS20845 d6a2bea375d358c8ec05b7501e07bacb 153 Gene3D G3DSA:1.10.10.10 1 58 1.6E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20845 d6a2bea375d358c8ec05b7501e07bacb 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CVS42_RS20845 d6a2bea375d358c8ec05b7501e07bacb 153 SUPERFAMILY SSF46785 5 67 1.17E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20845 d6a2bea375d358c8ec05b7501e07bacb 153 Pfam PF01037 Lrp/AsnC ligand binding domain 73 144 2.1E-17 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CVS42_RS04600 c4a6a47b0a07ed3cbf9a3a0d693ed219 210 Gene3D G3DSA:1.25.40.10 148 197 4.3E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS04600 c4a6a47b0a07ed3cbf9a3a0d693ed219 210 Pfam PF14559 Tetratricopeptide repeat 137 186 3.4E-6 T 29-03-2018 CVS42_RS04600 c4a6a47b0a07ed3cbf9a3a0d693ed219 210 Gene3D G3DSA:1.25.40.10 26 147 6.0E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS04600 c4a6a47b0a07ed3cbf9a3a0d693ed219 210 SUPERFAMILY SSF48452 60 182 5.31E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS11685 bc2002e0f2db2607dfd7e7b7af1c232a 445 Pfam PF12002 MgsA AAA+ ATPase C terminal 266 432 7.2E-68 T 29-03-2018 IPR021886 MgsA AAA+ ATPase C-terminal CVS42_RS11685 bc2002e0f2db2607dfd7e7b7af1c232a 445 Gene3D G3DSA:3.40.50.300 7 152 8.6E-29 T 29-03-2018 CVS42_RS11685 bc2002e0f2db2607dfd7e7b7af1c232a 445 Pfam PF16193 AAA C-terminal domain 188 265 4.4E-20 T 29-03-2018 IPR032423 AAA C-terminal domain CVS42_RS11685 bc2002e0f2db2607dfd7e7b7af1c232a 445 SUPERFAMILY SSF52540 10 224 4.31E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11685 bc2002e0f2db2607dfd7e7b7af1c232a 445 Gene3D G3DSA:1.10.3710.10 346 445 1.2E-34 T 29-03-2018 CVS42_RS11685 bc2002e0f2db2607dfd7e7b7af1c232a 445 SMART SM00382 48 164 5.9E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS11685 bc2002e0f2db2607dfd7e7b7af1c232a 445 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 52 158 6.5E-16 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CVS42_RS11685 bc2002e0f2db2607dfd7e7b7af1c232a 445 Gene3D G3DSA:1.20.272.10 250 344 9.1E-39 T 29-03-2018 CVS42_RS11685 bc2002e0f2db2607dfd7e7b7af1c232a 445 SUPERFAMILY SSF48019 250 432 3.57E-74 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CVS42_RS11685 bc2002e0f2db2607dfd7e7b7af1c232a 445 Gene3D G3DSA:1.10.8.60 153 241 7.6E-17 T 29-03-2018 CVS42_RS14915 54453a072ea2394a9c0083a084c28ad4 448 PIRSF PIRSF006060 1 448 9.7E-68 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS14915 54453a072ea2394a9c0083a084c28ad4 448 Pfam PF13520 Amino acid permease 47 406 6.0E-34 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS04750 7f356f61ac99b5914f75597d873c1727 357 SUPERFAMILY SSF53067 193 352 6.4E-22 T 29-03-2018 CVS42_RS04750 7f356f61ac99b5914f75597d873c1727 357 SUPERFAMILY SSF53067 67 179 8.2E-9 T 29-03-2018 CVS42_RS04750 7f356f61ac99b5914f75597d873c1727 357 Gene3D G3DSA:3.30.420.40 193 322 1.6E-13 T 29-03-2018 CVS42_RS04750 7f356f61ac99b5914f75597d873c1727 357 PIRSF PIRSF019169 7 353 2.7E-91 T 29-03-2018 IPR005883 Type IV pilus assembly protein PilM CVS42_RS04750 7f356f61ac99b5914f75597d873c1727 357 Pfam PF11104 Type IV pilus assembly protein PilM; 19 352 4.3E-100 T 29-03-2018 IPR005883 Type IV pilus assembly protein PilM CVS42_RS04750 7f356f61ac99b5914f75597d873c1727 357 SMART SM00842 17 183 0.0021 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CVS42_RS04750 7f356f61ac99b5914f75597d873c1727 357 Gene3D G3DSA:3.30.420.40 5 175 4.7E-26 T 29-03-2018 CVS42_RS04750 7f356f61ac99b5914f75597d873c1727 357 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 17 352 2.7E-80 T 29-03-2018 IPR005883 Type IV pilus assembly protein PilM CVS42_RS09815 f24a8dedf8ebc1c970d97eafafa8a134 671 SUPERFAMILY SSF52096 353 534 2.82E-66 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS09815 f24a8dedf8ebc1c970d97eafafa8a134 671 SUPERFAMILY SSF52096 172 266 2.82E-66 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS09815 f24a8dedf8ebc1c970d97eafafa8a134 671 SUPERFAMILY SSF50156 245 328 2.31E-12 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS09815 f24a8dedf8ebc1c970d97eafafa8a134 671 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 198 550 2.5E-111 T 29-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CVS42_RS09815 f24a8dedf8ebc1c970d97eafafa8a134 671 SMART SM00245 329 530 6.0E-60 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CVS42_RS09815 f24a8dedf8ebc1c970d97eafafa8a134 671 Pfam PF03572 Peptidase family S41 359 528 4.4E-49 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CVS42_RS09815 f24a8dedf8ebc1c970d97eafafa8a134 671 Gene3D G3DSA:3.90.226.10 343 609 5.6E-56 T 29-03-2018 CVS42_RS09815 f24a8dedf8ebc1c970d97eafafa8a134 671 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 535 665 4.6E-40 T 29-03-2018 IPR020992 Tail specific protease, C-terminal CVS42_RS09815 f24a8dedf8ebc1c970d97eafafa8a134 671 Gene3D G3DSA:2.30.42.10 248 342 1.3E-15 T 29-03-2018 CVS42_RS09815 f24a8dedf8ebc1c970d97eafafa8a134 671 Gene3D G3DSA:3.30.750.44 157 247 1.5E-19 T 29-03-2018 CVS42_RS09815 f24a8dedf8ebc1c970d97eafafa8a134 671 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 242 322 1.3E-14 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS09815 f24a8dedf8ebc1c970d97eafafa8a134 671 SMART SM00228 248 325 9.8E-13 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS19995 7455ccb0499e38e770de7f9d04f370e1 600 Pfam PF00557 Metallopeptidase family M24 315 532 6.7E-46 T 29-03-2018 IPR000994 Peptidase M24 CVS42_RS19995 7455ccb0499e38e770de7f9d04f370e1 600 SUPERFAMILY SSF55920 309 566 2.62E-61 T 29-03-2018 IPR000994 Peptidase M24 CVS42_RS19995 7455ccb0499e38e770de7f9d04f370e1 600 Gene3D G3DSA:3.90.230.10 306 559 1.0E-64 T 29-03-2018 CVS42_RS19995 7455ccb0499e38e770de7f9d04f370e1 600 Gene3D G3DSA:3.40.350.10 155 302 2.1E-14 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CVS42_RS19995 7455ccb0499e38e770de7f9d04f370e1 600 SUPERFAMILY SSF53092 8 132 2.79E-13 T 29-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal CVS42_RS19995 7455ccb0499e38e770de7f9d04f370e1 600 Pfam PF16189 Creatinase/Prolidase N-terminal domain 151 312 7.9E-34 T 29-03-2018 CVS42_RS19995 7455ccb0499e38e770de7f9d04f370e1 600 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 141 3.9E-18 T 29-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 CVS42_RS19995 7455ccb0499e38e770de7f9d04f370e1 600 Pfam PF16188 C-terminal region of peptidase_M24 541 598 3.4E-23 T 29-03-2018 IPR032416 Peptidase M24, C-terminal domain CVS42_RS19995 7455ccb0499e38e770de7f9d04f370e1 600 Gene3D G3DSA:3.40.350.10 2 149 8.8E-43 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CVS42_RS12955 dffcfc60d5c7d6f8c8d919fb086cc3b9 489 SUPERFAMILY SSF52402 339 430 1.34E-54 T 29-03-2018 CVS42_RS12955 dffcfc60d5c7d6f8c8d919fb086cc3b9 489 SUPERFAMILY SSF52402 100 246 1.34E-54 T 29-03-2018 CVS42_RS12955 dffcfc60d5c7d6f8c8d919fb086cc3b9 489 Gene3D G3DSA:3.40.50.620 92 459 2.6E-54 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS12955 dffcfc60d5c7d6f8c8d919fb086cc3b9 489 PIRSF PIRSF001589 1 445 7.0E-70 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CVS42_RS12955 dffcfc60d5c7d6f8c8d919fb086cc3b9 489 SUPERFAMILY SSF56235 2 72 7.03E-8 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS12955 dffcfc60d5c7d6f8c8d919fb086cc3b9 489 Pfam PF00733 Asparagine synthase 108 429 5.4E-63 T 29-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CVS42_RS12955 dffcfc60d5c7d6f8c8d919fb086cc3b9 489 Gene3D G3DSA:3.60.20.10 1 81 1.4E-6 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS09080 5d1d5764be4eff357d344b20dbf1a82f 231 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 38 230 30.365 T 29-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 CVS42_RS09080 5d1d5764be4eff357d344b20dbf1a82f 231 Pfam PF02525 Flavodoxin-like fold 39 228 6.3E-41 T 29-03-2018 IPR003680 Flavodoxin-like fold CVS42_RS09080 5d1d5764be4eff357d344b20dbf1a82f 231 Gene3D G3DSA:3.40.50.360 39 231 1.9E-36 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS09080 5d1d5764be4eff357d344b20dbf1a82f 231 SUPERFAMILY SSF52218 37 229 4.19E-51 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 SUPERFAMILY SSF55124 513 640 3.6E-30 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 Gene3D G3DSA:3.50.50.60 5 114 1.5E-11 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 644 767 2.9E-14 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 Gene3D G3DSA:3.50.50.60 115 255 2.4E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 SUPERFAMILY SSF51905 11 200 2.05E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 PIRSF PIRSF037149 9 846 0.0 T 29-03-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 3.6E-14 T 29-03-2018 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 3.6E-14 T 29-03-2018 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 273 295 3.6E-14 T 29-03-2018 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 113 131 3.6E-14 T 29-03-2018 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 17 811 0.0 T 29-03-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 Gene3D G3DSA:3.50.50.60 259 321 1.9E-6 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 Pfam PF04324 BFD-like [2Fe-2S] binding domain 435 482 6.3E-16 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 690 706 - T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 288 295 1.5E-8 T 29-03-2018 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 183 1.5E-8 T 29-03-2018 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 247 261 1.5E-8 T 29-03-2018 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 16 38 1.5E-8 T 29-03-2018 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 SUPERFAMILY SSF51905 156 321 4.53E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 Gene3D G3DSA:3.90.480.10 443 639 9.9E-15 T 29-03-2018 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 PRINTS PR00397 Sirohaem Fe-binding site signature 690 708 6.2E-6 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 PRINTS PR00397 Sirohaem Fe-binding site signature 647 665 6.2E-6 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 Gene3D G3DSA:3.30.413.10 642 827 5.3E-34 T 29-03-2018 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 SUPERFAMILY SSF56014 644 819 4.58E-47 T 29-03-2018 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 571 633 1.9E-11 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS00625 85f9e6241498cf333511a2204c3db749 859 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 16 295 4.3E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS16280 c8dfd4d220c7252e8ffe38ed042bb7e6 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.077 T 29-03-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 CVS42_RS16280 c8dfd4d220c7252e8ffe38ed042bb7e6 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 207 5.5E-102 T 29-03-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 CVS42_RS16280 c8dfd4d220c7252e8ffe38ed042bb7e6 210 PIRSF PIRSF006102 3 210 1.5E-65 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CVS42_RS16280 c8dfd4d220c7252e8ffe38ed042bb7e6 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 195 2.3E-61 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CVS42_RS16455 f2d36c148aa1b7a2a7bbfac6bfd11c4f 274 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CVS42_RS16455 f2d36c148aa1b7a2a7bbfac6bfd11c4f 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.9E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS16455 f2d36c148aa1b7a2a7bbfac6bfd11c4f 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.9E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS16455 f2d36c148aa1b7a2a7bbfac6bfd11c4f 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.9E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS16455 f2d36c148aa1b7a2a7bbfac6bfd11c4f 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.9E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS16455 f2d36c148aa1b7a2a7bbfac6bfd11c4f 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.9E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS16455 f2d36c148aa1b7a2a7bbfac6bfd11c4f 274 SUPERFAMILY SSF51735 2 269 5.27E-56 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS16455 f2d36c148aa1b7a2a7bbfac6bfd11c4f 274 Gene3D G3DSA:3.40.50.720 2 262 1.1E-50 T 29-03-2018 CVS42_RS16455 f2d36c148aa1b7a2a7bbfac6bfd11c4f 274 Pfam PF00106 short chain dehydrogenase 4 189 2.0E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS09615 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS09615 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS09615 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS09615 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-14 T 29-03-2018 CVS42_RS09615 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 Gene3D G3DSA:1.10.1900.20 55 116 2.4E-29 T 29-03-2018 IPR035566 Ribosomal protein L20 C-terminal domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS09615 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 SUPERFAMILY SSF74731 2 117 2.09E-50 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS09615 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS09615 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 7.5E-52 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS09615 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.654 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS09615 9fb53b0bbac8b723d2c6b55c1fcbf4ec 118 Pfam PF00453 Ribosomal protein L20 3 109 3.0E-49 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS21615 9dfc6b0829993d58cc8b16a63ae31cc8 400 Gene3D G3DSA:3.40.50.10300 182 400 6.9E-67 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CVS42_RS21615 9dfc6b0829993d58cc8b16a63ae31cc8 400 SUPERFAMILY SSF102645 185 398 2.22E-78 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CVS42_RS21615 9dfc6b0829993d58cc8b16a63ae31cc8 400 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 394 1.6E-149 T 29-03-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 CVS42_RS21615 9dfc6b0829993d58cc8b16a63ae31cc8 400 SUPERFAMILY SSF52507 3 179 1.57E-62 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CVS42_RS21615 9dfc6b0829993d58cc8b16a63ae31cc8 400 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 8.4E-75 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CVS42_RS21615 9dfc6b0829993d58cc8b16a63ae31cc8 400 Gene3D G3DSA:3.40.50.1950 1 181 2.9E-57 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CVS42_RS21615 9dfc6b0829993d58cc8b16a63ae31cc8 400 Pfam PF02441 Flavoprotein 6 180 1.6E-46 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CVS42_RS05800 62af0368d92f709a1d3e9af711ae5f59 292 Pfam PF07201 HrpJ-like domain 59 222 1.2E-38 T 29-03-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 CVS42_RS05800 62af0368d92f709a1d3e9af711ae5f59 292 Gene3D G3DSA:1.20.1170.10 32 286 0.0012 T 29-03-2018 CVS42_RS05800 62af0368d92f709a1d3e9af711ae5f59 292 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 40 280 7.3E-51 T 29-03-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 CVS42_RS05800 62af0368d92f709a1d3e9af711ae5f59 292 SUPERFAMILY SSF140591 73 268 7.85E-59 T 29-03-2018 CVS42_RS22140 de6bf4743b9fca8ccf8e49607658d07c 80 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 8.8E-31 T 29-03-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CVS42_RS22140 de6bf4743b9fca8ccf8e49607658d07c 80 Hamap MF_01396 ATP synthase subunit c [atpH]. 10 75 13.887 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22140 de6bf4743b9fca8ccf8e49607658d07c 80 Gene3D G3DSA:1.20.20.10 1 79 5.5E-15 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CVS42_RS22140 de6bf4743b9fca8ccf8e49607658d07c 80 SUPERFAMILY SSF81333 3 77 6.54E-18 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CVS42_RS22140 de6bf4743b9fca8ccf8e49607658d07c 80 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 29-03-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22140 de6bf4743b9fca8ccf8e49607658d07c 80 Pfam PF00137 ATP synthase subunit C 11 69 1.4E-9 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CVS42_RS22140 de6bf4743b9fca8ccf8e49607658d07c 80 PRINTS PR00124 ATP synthase C subunit signature 33 48 2.3E-8 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22140 de6bf4743b9fca8ccf8e49607658d07c 80 PRINTS PR00124 ATP synthase C subunit signature 12 31 2.3E-8 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS22140 de6bf4743b9fca8ccf8e49607658d07c 80 PRINTS PR00124 ATP synthase C subunit signature 50 75 2.3E-8 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CVS42_RS13500 87d3501c537629950162e9eb680f6b6e 345 Gene3D G3DSA:3.90.650.10 171 345 1.6E-64 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS13500 87d3501c537629950162e9eb680f6b6e 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 334 1.2E-148 T 29-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CVS42_RS13500 87d3501c537629950162e9eb680f6b6e 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 340 2.7E-37 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS13500 87d3501c537629950162e9eb680f6b6e 345 SUPERFAMILY SSF55326 7 170 2.54E-53 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CVS42_RS13500 87d3501c537629950162e9eb680f6b6e 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 164 1.1E-15 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CVS42_RS13500 87d3501c537629950162e9eb680f6b6e 345 SUPERFAMILY SSF56042 171 342 4.64E-62 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS13500 87d3501c537629950162e9eb680f6b6e 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 46.889 T 29-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CVS42_RS13500 87d3501c537629950162e9eb680f6b6e 345 Gene3D G3DSA:3.30.1330.10 36 161 8.8E-53 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CVS42_RS20785 13079aff7f3181d922bdbfeff2e51825 333 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 9 333 54.928 T 29-03-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 CVS42_RS20785 13079aff7f3181d922bdbfeff2e51825 333 Pfam PF00174 Oxidoreductase molybdopterin binding domain 108 266 6.3E-29 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CVS42_RS20785 13079aff7f3181d922bdbfeff2e51825 333 SUPERFAMILY SSF56524 77 329 4.84E-90 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CVS42_RS20785 13079aff7f3181d922bdbfeff2e51825 333 Gene3D G3DSA:3.90.420.10 66 333 8.0E-58 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CVS42_RS04680 a7ed18a10de2d2dc39ac7a914d74a8c5 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 9 228 2.2E-91 T 29-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS04680 a7ed18a10de2d2dc39ac7a914d74a8c5 244 SUPERFAMILY SSF54292 4 105 4.56E-32 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CVS42_RS04680 a7ed18a10de2d2dc39ac7a914d74a8c5 244 Gene3D G3DSA:1.10.1060.10 106 237 5.9E-29 T 29-03-2018 CVS42_RS04680 a7ed18a10de2d2dc39ac7a914d74a8c5 244 SUPERFAMILY SSF46548 106 229 2.62E-33 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CVS42_RS04680 a7ed18a10de2d2dc39ac7a914d74a8c5 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS04680 a7ed18a10de2d2dc39ac7a914d74a8c5 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 56 64 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CVS42_RS04680 a7ed18a10de2d2dc39ac7a914d74a8c5 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 110 4.3E-37 T 29-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS04680 a7ed18a10de2d2dc39ac7a914d74a8c5 244 Gene3D G3DSA:3.10.20.30 1 105 1.0E-33 T 29-03-2018 IPR012675 Beta-grasp domain CVS42_RS04680 a7ed18a10de2d2dc39ac7a914d74a8c5 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 8.5E-12 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS09730 efd5144efef40825357a2f72a8e6d06c 367 Pfam PF00005 ABC transporter 24 165 5.7E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS09730 efd5144efef40825357a2f72a8e6d06c 367 SUPERFAMILY SSF50331 241 362 8.5E-10 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CVS42_RS09730 efd5144efef40825357a2f72a8e6d06c 367 Gene3D G3DSA:3.40.50.300 4 252 6.3E-76 T 29-03-2018 CVS42_RS09730 efd5144efef40825357a2f72a8e6d06c 367 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS09730 efd5144efef40825357a2f72a8e6d06c 367 SMART SM00382 33 216 7.2E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS09730 efd5144efef40825357a2f72a8e6d06c 367 SUPERFAMILY SSF52540 9 247 5.32E-87 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09730 efd5144efef40825357a2f72a8e6d06c 367 Pfam PF08402 TOBE domain 283 362 3.2E-11 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CVS42_RS09730 efd5144efef40825357a2f72a8e6d06c 367 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 39 362 4.6E-145 T 29-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 CVS42_RS15605 3e8ecbc49458cb3acd782f7cf80909fe 170 ProSitePatterns PS01117 MarR-type HTH domain signature. 69 103 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CVS42_RS15605 3e8ecbc49458cb3acd782f7cf80909fe 170 Gene3D G3DSA:1.10.10.10 2 151 1.0E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS15605 3e8ecbc49458cb3acd782f7cf80909fe 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 9.8E-14 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS15605 3e8ecbc49458cb3acd782f7cf80909fe 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 9.8E-14 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS15605 3e8ecbc49458cb3acd782f7cf80909fe 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 9.8E-14 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS15605 3e8ecbc49458cb3acd782f7cf80909fe 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 9.8E-14 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS15605 3e8ecbc49458cb3acd782f7cf80909fe 170 SMART SM00347 29 130 1.0E-15 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS15605 3e8ecbc49458cb3acd782f7cf80909fe 170 Pfam PF01047 MarR family 36 94 3.9E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS15605 3e8ecbc49458cb3acd782f7cf80909fe 170 SUPERFAMILY SSF46785 9 146 7.25E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS12945 edc0d303f7242356ef2bac2ea8906d90 301 Gene3D G3DSA:3.40.50.720 1 90 6.5E-6 T 29-03-2018 CVS42_RS12945 edc0d303f7242356ef2bac2ea8906d90 301 Pfam PF13578 Methyltransferase domain 146 254 2.6E-13 T 29-03-2018 CVS42_RS12945 edc0d303f7242356ef2bac2ea8906d90 301 SUPERFAMILY SSF53335 130 279 3.38E-11 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS12945 edc0d303f7242356ef2bac2ea8906d90 301 Gene3D G3DSA:3.40.50.150 91 275 6.4E-9 T 29-03-2018 CVS42_RS12945 edc0d303f7242356ef2bac2ea8906d90 301 SUPERFAMILY SSF53335 2 171 5.65E-5 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS16795 60cb33241bd448214e3be3e6478ae4d9 348 SUPERFAMILY SSF53822 52 311 4.53E-31 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CVS42_RS16795 60cb33241bd448214e3be3e6478ae4d9 348 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 54 300 2.3E-19 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CVS42_RS16795 60cb33241bd448214e3be3e6478ae4d9 348 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 55 347 1.4E-101 T 29-03-2018 IPR014301 TMAO reductase system, periplasmic protein TorT CVS42_RS16795 60cb33241bd448214e3be3e6478ae4d9 348 Gene3D G3DSA:3.40.50.2300 169 314 6.7E-13 T 29-03-2018 CVS42_RS16795 60cb33241bd448214e3be3e6478ae4d9 348 Gene3D G3DSA:3.40.50.2300 53 168 1.1E-14 T 29-03-2018 CVS42_RS13580 2d0d1726cfa204dfa154357c9a3bc4d7 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CVS42_RS13580 2d0d1726cfa204dfa154357c9a3bc4d7 262 SUPERFAMILY SSF117143 92 223 6.28E-35 T 29-03-2018 CVS42_RS13580 2d0d1726cfa204dfa154357c9a3bc4d7 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 260 1.6E-23 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CVS42_RS13580 2d0d1726cfa204dfa154357c9a3bc4d7 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 1.9E-110 T 29-03-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 CVS42_RS13580 2d0d1726cfa204dfa154357c9a3bc4d7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 8.9E-30 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CVS42_RS13580 2d0d1726cfa204dfa154357c9a3bc4d7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 2.6E-43 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CVS42_RS13580 2d0d1726cfa204dfa154357c9a3bc4d7 262 Pfam PF00460 Flagella basal body rod protein 5 35 1.1E-11 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CVS42_RS06645 359f95cd5b6f9ae1a68541d7497a0530 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 42.132 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS06645 359f95cd5b6f9ae1a68541d7497a0530 217 SUPERFAMILY SSF55821 8 210 6.18E-84 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CVS42_RS06645 359f95cd5b6f9ae1a68541d7497a0530 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 4.3E-80 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS06645 359f95cd5b6f9ae1a68541d7497a0530 217 Gene3D G3DSA:3.90.870.10 4 216 7.1E-91 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CVS42_RS06645 359f95cd5b6f9ae1a68541d7497a0530 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 7.7E-83 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CVS42_RS15500 6172f8825c48053f3582f85b2d82297f 160 Gene3D G3DSA:3.90.79.10 1 160 1.3E-32 T 29-03-2018 CVS42_RS15500 6172f8825c48053f3582f85b2d82297f 160 SUPERFAMILY SSF55811 2 158 7.04E-33 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CVS42_RS15500 6172f8825c48053f3582f85b2d82297f 160 PIRSF PIRSF017340 1 160 2.9E-52 T 29-03-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 CVS42_RS15500 6172f8825c48053f3582f85b2d82297f 160 Pfam PF00293 NUDIX domain 29 143 2.2E-14 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CVS42_RS04380 a07e647a01425b6b44bec7b1dd45b570 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 156.871 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CVS42_RS04380 a07e647a01425b6b44bec7b1dd45b570 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 2.2E-147 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CVS42_RS04380 a07e647a01425b6b44bec7b1dd45b570 321 Pfam PF04055 Radical SAM superfamily 90 252 6.0E-18 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS04380 a07e647a01425b6b44bec7b1dd45b570 321 Gene3D G3DSA:3.20.20.70 32 299 4.9E-30 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS04380 a07e647a01425b6b44bec7b1dd45b570 321 SMART SM00729 84 293 1.8E-19 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CVS42_RS04380 a07e647a01425b6b44bec7b1dd45b570 321 PIRSF PIRSF005963 7 321 8.3E-131 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CVS42_RS04380 a07e647a01425b6b44bec7b1dd45b570 321 SUPERFAMILY SSF102114 52 317 4.45E-70 T 29-03-2018 CVS42_RS04380 a07e647a01425b6b44bec7b1dd45b570 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 30 73 4.4E-7 T 29-03-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CVS42_RS00260 f7c605ec8aa749ce7a46ce010f888fa8 208 ProSitePatterns PS00856 Guanylate kinase-like signature. 42 59 - T 29-03-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CVS42_RS00260 f7c605ec8aa749ce7a46ce010f888fa8 208 Pfam PF00625 Guanylate kinase 6 185 4.0E-57 T 29-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CVS42_RS00260 f7c605ec8aa749ce7a46ce010f888fa8 208 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 185 4.4E-72 T 29-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CVS42_RS00260 f7c605ec8aa749ce7a46ce010f888fa8 208 Hamap MF_00328 Guanylate kinase [gmk]. 3 188 37.031 T 29-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CVS42_RS00260 f7c605ec8aa749ce7a46ce010f888fa8 208 Gene3D G3DSA:3.30.63.10 53 86 4.8E-26 T 29-03-2018 CVS42_RS00260 f7c605ec8aa749ce7a46ce010f888fa8 208 SUPERFAMILY SSF52540 3 191 4.15E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00260 f7c605ec8aa749ce7a46ce010f888fa8 208 SMART SM00072 4 188 3.0E-67 T 29-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CVS42_RS00260 f7c605ec8aa749ce7a46ce010f888fa8 208 Gene3D G3DSA:3.40.50.300 87 188 3.8E-30 T 29-03-2018 CVS42_RS00260 f7c605ec8aa749ce7a46ce010f888fa8 208 Gene3D G3DSA:3.40.50.300 1 52 0.0021 T 29-03-2018 CVS42_RS07515 467bfc522ae03efe76ebc4cce9062762 644 SUPERFAMILY SSF52540 87 374 9.39E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS07515 467bfc522ae03efe76ebc4cce9062762 644 Gene3D G3DSA:3.40.50.300 7 238 5.3E-59 T 29-03-2018 CVS42_RS07515 467bfc522ae03efe76ebc4cce9062762 644 Pfam PF03880 DbpA RNA binding domain 510 580 1.5E-21 T 29-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CVS42_RS07515 467bfc522ae03efe76ebc4cce9062762 644 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 167 175 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CVS42_RS07515 467bfc522ae03efe76ebc4cce9062762 644 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 14 582 44.88 T 29-03-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 CVS42_RS07515 467bfc522ae03efe76ebc4cce9062762 644 SMART SM00490 272 353 5.5E-32 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS07515 467bfc522ae03efe76ebc4cce9062762 644 Gene3D G3DSA:3.40.50.300 239 421 1.1E-44 T 29-03-2018 CVS42_RS07515 467bfc522ae03efe76ebc4cce9062762 644 Pfam PF00270 DEAD/DEAH box helicase 44 209 1.6E-47 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CVS42_RS07515 467bfc522ae03efe76ebc4cce9062762 644 Pfam PF00271 Helicase conserved C-terminal domain 245 353 5.1E-28 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS07515 467bfc522ae03efe76ebc4cce9062762 644 SMART SM00487 38 236 1.6E-60 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS01860 4e7bbfd10a65a0d6a52e0f80959d1fd0 381 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 108 145 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CVS42_RS01860 4e7bbfd10a65a0d6a52e0f80959d1fd0 381 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 9 376 8.6E-135 T 29-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 CVS42_RS01860 4e7bbfd10a65a0d6a52e0f80959d1fd0 381 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 381 59.924 T 29-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 CVS42_RS01860 4e7bbfd10a65a0d6a52e0f80959d1fd0 381 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CVS42_RS01860 4e7bbfd10a65a0d6a52e0f80959d1fd0 381 Pfam PF07687 Peptidase dimerisation domain 175 282 6.2E-23 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CVS42_RS01860 4e7bbfd10a65a0d6a52e0f80959d1fd0 381 SUPERFAMILY SSF55031 179 284 6.88E-19 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CVS42_RS01860 4e7bbfd10a65a0d6a52e0f80959d1fd0 381 SUPERFAMILY SSF53187 303 380 1.6E-61 T 29-03-2018 CVS42_RS01860 4e7bbfd10a65a0d6a52e0f80959d1fd0 381 SUPERFAMILY SSF53187 5 178 1.6E-61 T 29-03-2018 CVS42_RS01860 4e7bbfd10a65a0d6a52e0f80959d1fd0 381 Gene3D G3DSA:3.40.630.10 2 282 5.2E-54 T 29-03-2018 CVS42_RS01860 4e7bbfd10a65a0d6a52e0f80959d1fd0 381 Pfam PF01546 Peptidase family M20/M25/M40 74 377 1.2E-32 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CVS42_RS14305 b5aaabf0f10a1e5d6c2e865742106578 454 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 4 448 2.1E-192 T 29-03-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 CVS42_RS14305 b5aaabf0f10a1e5d6c2e865742106578 454 Gene3D G3DSA:3.30.1360.60 4 81 5.3E-27 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CVS42_RS14305 b5aaabf0f10a1e5d6c2e865742106578 454 Pfam PF02378 Phosphotransferase system, EIIC 110 395 5.5E-50 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CVS42_RS14305 b5aaabf0f10a1e5d6c2e865742106578 454 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 153 437 1.9E-90 T 29-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CVS42_RS14305 b5aaabf0f10a1e5d6c2e865742106578 454 Pfam PF00367 phosphotransferase system, EIIB 9 41 2.6E-14 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CVS42_RS14305 b5aaabf0f10a1e5d6c2e865742106578 454 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 111 3.9E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CVS42_RS14305 b5aaabf0f10a1e5d6c2e865742106578 454 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CVS42_RS14305 b5aaabf0f10a1e5d6c2e865742106578 454 SUPERFAMILY SSF55604 6 81 1.07E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CVS42_RS06260 edd8e7dbc6a0cabb49ca693af3724dd3 555 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 339 519 1.6E-39 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS06260 edd8e7dbc6a0cabb49ca693af3724dd3 555 SMART SM00283 293 554 4.0E-73 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS06260 edd8e7dbc6a0cabb49ca693af3724dd3 555 Gene3D G3DSA:1.20.120.30 37 185 8.5E-7 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CVS42_RS06260 edd8e7dbc6a0cabb49ca693af3724dd3 555 SMART SM00304 279 331 91.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS06260 edd8e7dbc6a0cabb49ca693af3724dd3 555 SMART SM00304 224 278 4.2E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS06260 edd8e7dbc6a0cabb49ca693af3724dd3 555 Gene3D G3DSA:1.10.287.950 315 510 2.1E-49 T 29-03-2018 CVS42_RS06260 edd8e7dbc6a0cabb49ca693af3724dd3 555 Gene3D G3DSA:1.10.287.950 511 553 0.012 T 29-03-2018 CVS42_RS06260 edd8e7dbc6a0cabb49ca693af3724dd3 555 Gene3D G3DSA:1.10.287.950 186 314 0.0088 T 29-03-2018 CVS42_RS06260 edd8e7dbc6a0cabb49ca693af3724dd3 555 SUPERFAMILY SSF58104 249 554 1.44E-73 T 29-03-2018 CVS42_RS06260 edd8e7dbc6a0cabb49ca693af3724dd3 555 Pfam PF12729 Four helix bundle sensory module for signal transduction 16 197 3.1E-7 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CVS42_RS00870 30e3e184056734fc88f36f99e49e0c66 617 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 400 583 1.4E-44 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS00870 30e3e184056734fc88f36f99e49e0c66 617 SUPERFAMILY SSF58104 308 617 9.68E-79 T 29-03-2018 CVS42_RS00870 30e3e184056734fc88f36f99e49e0c66 617 SMART SM00283 355 616 4.4E-81 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS00870 30e3e184056734fc88f36f99e49e0c66 617 Gene3D G3DSA:1.20.120.570 16 152 0.3 T 29-03-2018 CVS42_RS00870 30e3e184056734fc88f36f99e49e0c66 617 Gene3D G3DSA:1.10.287.850 318 394 0.0046 T 29-03-2018 CVS42_RS00870 30e3e184056734fc88f36f99e49e0c66 617 Gene3D G3DSA:1.10.287.950 395 617 1.3E-52 T 29-03-2018 CVS42_RS00870 30e3e184056734fc88f36f99e49e0c66 617 SMART SM01358 26 261 4.0E-34 T 29-03-2018 IPR032255 Helical bimodular sensor domain CVS42_RS00870 30e3e184056734fc88f36f99e49e0c66 617 SMART SM00304 287 340 8.4E-5 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS03035 bbf060c1fddb81f8e281d6ed4ece26bd 196 SUPERFAMILY SSF52540 18 192 2.62E-38 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS03035 bbf060c1fddb81f8e281d6ed4ece26bd 196 Pfam PF01583 Adenylylsulphate kinase 24 174 5.7E-72 T 29-03-2018 CVS42_RS03035 bbf060c1fddb81f8e281d6ed4ece26bd 196 Gene3D G3DSA:3.40.50.300 19 196 5.1E-52 T 29-03-2018 CVS42_RS03035 bbf060c1fddb81f8e281d6ed4ece26bd 196 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 22 194 38.006 T 29-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CVS42_RS03035 bbf060c1fddb81f8e281d6ed4ece26bd 196 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 6 188 4.8E-80 T 29-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 SUPERFAMILY SSF52540 315 587 6.81E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 PIRSF PIRSF001174 1 775 0.0 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 Gene3D G3DSA:3.30.230.10 585 772 1.5E-71 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 SUPERFAMILY SSF88697 10 201 8.2E-52 T 29-03-2018 IPR015947 PUA-like domain CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 SUPERFAMILY SSF54211 595 771 1.56E-60 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 Gene3D G3DSA:3.40.50.300 313 490 2.0E-29 T 29-03-2018 CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.0E-17 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 3.5E-42 T 29-03-2018 IPR003111 Lon, substrate-binding domain CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 2.6E-56 T 29-03-2018 CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 2.6E-56 T 29-03-2018 CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 2.6E-56 T 29-03-2018 CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 2.6E-56 T 29-03-2018 CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 2.6E-56 T 29-03-2018 CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 1.4E-99 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 Gene3D G3DSA:1.10.4060.10 122 211 5.3E-29 T 29-03-2018 CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 Gene3D G3DSA:2.30.130.40 1 118 4.9E-30 T 29-03-2018 CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 Gene3D G3DSA:1.10.8.60 491 584 1.8E-33 T 29-03-2018 CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 SMART SM00382 348 492 6.1E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 Hamap MF_01973 Lon protease [lon]. 11 772 71.709 T 29-03-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 SMART SM00464 10 202 1.5E-78 T 29-03-2018 IPR003111 Lon, substrate-binding domain CVS42_RS11390 d99f4060463e26824e982ed37831dd00 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 29-03-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CVS42_RS04510 550289fcebf6d9457ddfa5a9bf8883c4 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 144 6.4E-37 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CVS42_RS04510 550289fcebf6d9457ddfa5a9bf8883c4 154 Gene3D G3DSA:3.40.390.30 1 154 1.9E-53 T 29-03-2018 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 CVS42_RS04510 550289fcebf6d9457ddfa5a9bf8883c4 154 Pfam PF02130 Uncharacterized protein family UPF0054 35 143 1.3E-38 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CVS42_RS04510 550289fcebf6d9457ddfa5a9bf8883c4 154 SUPERFAMILY SSF55486 10 149 1.15E-48 T 29-03-2018 CVS42_RS04510 550289fcebf6d9457ddfa5a9bf8883c4 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.869 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CVS42_RS04510 550289fcebf6d9457ddfa5a9bf8883c4 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 29-03-2018 IPR020549 Endoribonuclease YbeY, conserved site CVS42_RS21150 3aaa4a1b3a3b2a1c5ef7cc4764bfaed3 323 Gene3D G3DSA:1.10.10.10 1 84 5.9E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS21150 3aaa4a1b3a3b2a1c5ef7cc4764bfaed3 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.5E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS21150 3aaa4a1b3a3b2a1c5ef7cc4764bfaed3 323 Pfam PF03466 LysR substrate binding domain 92 287 8.6E-31 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS21150 3aaa4a1b3a3b2a1c5ef7cc4764bfaed3 323 SUPERFAMILY SSF53850 92 299 1.5E-32 T 29-03-2018 CVS42_RS21150 3aaa4a1b3a3b2a1c5ef7cc4764bfaed3 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.9E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS21150 3aaa4a1b3a3b2a1c5ef7cc4764bfaed3 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.9E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS21150 3aaa4a1b3a3b2a1c5ef7cc4764bfaed3 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.9E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS21150 3aaa4a1b3a3b2a1c5ef7cc4764bfaed3 323 SUPERFAMILY SSF46785 2 110 2.72E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS21150 3aaa4a1b3a3b2a1c5ef7cc4764bfaed3 323 Gene3D G3DSA:3.40.190.10 179 266 1.6E-18 T 29-03-2018 CVS42_RS21150 3aaa4a1b3a3b2a1c5ef7cc4764bfaed3 323 Gene3D G3DSA:3.40.190.10 90 178 5.5E-14 T 29-03-2018 CVS42_RS16510 3c0e60447071928d8dd440512bd4c917 129 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 33 7.3E-10 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS16510 3c0e60447071928d8dd440512bd4c917 129 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 33 1.9E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS16510 3c0e60447071928d8dd440512bd4c917 129 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS16510 3c0e60447071928d8dd440512bd4c917 129 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 34 112 4.2E-17 T 29-03-2018 IPR031982 Type IV minor pilin ComP CVS42_RS16510 3c0e60447071928d8dd440512bd4c917 129 SUPERFAMILY SSF54523 13 119 3.77E-21 T 29-03-2018 CVS42_RS16510 3c0e60447071928d8dd440512bd4c917 129 Gene3D G3DSA:3.30.700.10 13 128 1.2E-17 T 29-03-2018 CVS42_RS12490 27fcfe25a0b39ed9c9daeb419f837428 282 Pfam PF00230 Major intrinsic protein 8 253 1.3E-63 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS12490 27fcfe25a0b39ed9c9daeb419f837428 282 ProSitePatterns PS00221 MIP family signature. 68 76 - T 29-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS12490 27fcfe25a0b39ed9c9daeb419f837428 282 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 253 5.1E-70 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS12490 27fcfe25a0b39ed9c9daeb419f837428 282 SUPERFAMILY SSF81338 9 257 2.09E-76 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CVS42_RS12490 27fcfe25a0b39ed9c9daeb419f837428 282 PRINTS PR00783 Major intrinsic protein family signature 11 30 9.7E-54 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS12490 27fcfe25a0b39ed9c9daeb419f837428 282 PRINTS PR00783 Major intrinsic protein family signature 50 74 9.7E-54 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS12490 27fcfe25a0b39ed9c9daeb419f837428 282 PRINTS PR00783 Major intrinsic protein family signature 153 171 9.7E-54 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS12490 27fcfe25a0b39ed9c9daeb419f837428 282 PRINTS PR00783 Major intrinsic protein family signature 186 208 9.7E-54 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS12490 27fcfe25a0b39ed9c9daeb419f837428 282 PRINTS PR00783 Major intrinsic protein family signature 87 106 9.7E-54 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS12490 27fcfe25a0b39ed9c9daeb419f837428 282 PRINTS PR00783 Major intrinsic protein family signature 236 256 9.7E-54 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS12490 27fcfe25a0b39ed9c9daeb419f837428 282 Gene3D G3DSA:1.20.1080.10 3 261 2.9E-76 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CVS42_RS08410 f7f628a635471605a80da4b89105193e 296 Gene3D G3DSA:1.10.10.10 3 87 9.8E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08410 f7f628a635471605a80da4b89105193e 296 Gene3D G3DSA:3.40.190.10 176 262 5.2E-22 T 29-03-2018 CVS42_RS08410 f7f628a635471605a80da4b89105193e 296 SUPERFAMILY SSF46785 3 105 7.27E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08410 f7f628a635471605a80da4b89105193e 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.1E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS08410 f7f628a635471605a80da4b89105193e 296 Pfam PF03466 LysR substrate binding domain 90 289 1.8E-37 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS08410 f7f628a635471605a80da4b89105193e 296 SUPERFAMILY SSF53850 92 293 3.08E-39 T 29-03-2018 CVS42_RS08410 f7f628a635471605a80da4b89105193e 296 Gene3D G3DSA:3.40.190.10 89 175 4.4E-13 T 29-03-2018 CVS42_RS05055 770b0785a57c542c5161bc6bb5434e37 304 Gene3D G3DSA:1.10.10.10 1 85 1.8E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS05055 770b0785a57c542c5161bc6bb5434e37 304 SUPERFAMILY SSF53850 89 293 5.43E-28 T 29-03-2018 CVS42_RS05055 770b0785a57c542c5161bc6bb5434e37 304 Pfam PF03466 LysR substrate binding domain 86 290 1.0E-26 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS05055 770b0785a57c542c5161bc6bb5434e37 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.5E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS05055 770b0785a57c542c5161bc6bb5434e37 304 SUPERFAMILY SSF46785 1 108 2.67E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS05055 770b0785a57c542c5161bc6bb5434e37 304 Gene3D G3DSA:3.40.190.10 174 255 2.5E-7 T 29-03-2018 CVS42_RS05055 770b0785a57c542c5161bc6bb5434e37 304 Gene3D G3DSA:3.40.190.10 90 173 6.8E-11 T 29-03-2018 CVS42_RS05055 770b0785a57c542c5161bc6bb5434e37 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS05055 770b0785a57c542c5161bc6bb5434e37 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS05055 770b0785a57c542c5161bc6bb5434e37 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS08940 19635c9bfb753e1df5d17e27ff84f768 665 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 656 28.848 T 29-03-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 CVS42_RS08940 19635c9bfb753e1df5d17e27ff84f768 665 SUPERFAMILY SSF51905 265 479 6.47E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS08940 19635c9bfb753e1df5d17e27ff84f768 665 SUPERFAMILY SSF51905 570 658 6.47E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS08940 19635c9bfb753e1df5d17e27ff84f768 665 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 117 241 1.3E-45 T 29-03-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 CVS42_RS08940 19635c9bfb753e1df5d17e27ff84f768 665 Gene3D G3DSA:3.40.50.150 9 252 2.2E-84 T 29-03-2018 CVS42_RS08940 19635c9bfb753e1df5d17e27ff84f768 665 Gene3D G3DSA:3.50.50.60 253 664 2.0E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS08940 19635c9bfb753e1df5d17e27ff84f768 665 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 265 661 4.0E-155 T 29-03-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 CVS42_RS08940 19635c9bfb753e1df5d17e27ff84f768 665 SUPERFAMILY SSF54373 477 566 1.23E-5 T 29-03-2018 CVS42_RS08940 19635c9bfb753e1df5d17e27ff84f768 665 Pfam PF01266 FAD dependent oxidoreductase 265 631 8.1E-53 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CVS42_RS01885 e96982bad3030f77ac20bdd7333ed428 105 PIRSF PIRSF028773 1 105 1.3E-47 T 29-03-2018 IPR007458 Protein of unknown function DUF496 CVS42_RS01885 e96982bad3030f77ac20bdd7333ed428 105 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 11 99 6.0E-37 T 29-03-2018 IPR007458 Protein of unknown function DUF496 CVS42_RS01885 e96982bad3030f77ac20bdd7333ed428 105 Pfam PF04363 Protein of unknown function (DUF496) 9 99 1.3E-44 T 29-03-2018 IPR007458 Protein of unknown function DUF496 CVS42_RS01885 e96982bad3030f77ac20bdd7333ed428 105 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 9 103 24.356 T 29-03-2018 IPR007458 Protein of unknown function DUF496 CVS42_RS16000 d2148486df8de41de16e5a1a98fac23b 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 4 376 3.0E-147 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CVS42_RS16000 d2148486df8de41de16e5a1a98fac23b 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 373 3.8E-132 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CVS42_RS16000 d2148486df8de41de16e5a1a98fac23b 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 42.337 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CVS42_RS16000 d2148486df8de41de16e5a1a98fac23b 379 SUPERFAMILY SSF53756 6 377 7.63E-33 T 29-03-2018 CVS42_RS16000 d2148486df8de41de16e5a1a98fac23b 379 Gene3D G3DSA:3.40.50.2000 2 182 9.2E-5 T 29-03-2018 CVS42_RS16000 d2148486df8de41de16e5a1a98fac23b 379 Gene3D G3DSA:3.40.50.2000 183 363 3.6E-10 T 29-03-2018 CVS42_RS08715 295abc7810f90647a3bb9940078da185 400 Gene3D G3DSA:3.30.70.20 8 67 2.6E-8 T 29-03-2018 CVS42_RS08715 295abc7810f90647a3bb9940078da185 400 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 7 399 2.4E-227 T 29-03-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 CVS42_RS08715 295abc7810f90647a3bb9940078da185 400 Pfam PF13183 4Fe-4S dicluster domain 10 74 2.7E-9 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS08715 295abc7810f90647a3bb9940078da185 400 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS08715 295abc7810f90647a3bb9940078da185 400 SUPERFAMILY SSF46548 10 86 3.49E-15 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CVS42_RS08715 295abc7810f90647a3bb9940078da185 400 Gene3D G3DSA:3.30.70.20 68 390 1.5E-4 T 29-03-2018 CVS42_RS08715 295abc7810f90647a3bb9940078da185 400 Pfam PF02754 Cysteine-rich domain 167 253 4.2E-15 T 29-03-2018 IPR004017 Cysteine-rich domain CVS42_RS08715 295abc7810f90647a3bb9940078da185 400 Pfam PF02754 Cysteine-rich domain 297 380 6.4E-12 T 29-03-2018 IPR004017 Cysteine-rich domain CVS42_RS10270 131792667a99d42291451e17a7abf4ac 188 Pfam PF00293 NUDIX domain 31 141 2.2E-15 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CVS42_RS10270 131792667a99d42291451e17a7abf4ac 188 Gene3D G3DSA:3.90.79.10 3 187 7.0E-40 T 29-03-2018 CVS42_RS10270 131792667a99d42291451e17a7abf4ac 188 SUPERFAMILY SSF55811 26 179 1.35E-36 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CVS42_RS10270 131792667a99d42291451e17a7abf4ac 188 ProSitePatterns PS01293 Nudix CoA signature. 45 65 - T 29-03-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918 CVS42_RS01400 eff5972edbf6bea11c42dd473930d15d 131 SUPERFAMILY SSF54637 3 128 6.38E-35 T 29-03-2018 IPR029069 HotDog domain CVS42_RS01400 eff5972edbf6bea11c42dd473930d15d 131 Gene3D G3DSA:3.10.129.10 1 131 2.0E-30 T 29-03-2018 CVS42_RS01400 eff5972edbf6bea11c42dd473930d15d 131 Pfam PF13279 Thioesterase-like superfamily 9 117 1.0E-10 T 29-03-2018 CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 1.9E-9 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 Gene3D G3DSA:3.30.70.240 390 549 1.0E-26 T 29-03-2018 CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 Gene3D G3DSA:3.40.50.300 1 185 2.1E-37 T 29-03-2018 CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 Pfam PF00679 Elongation factor G C-terminus 399 483 6.9E-20 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 SUPERFAMILY SSF52540 2 232 1.74E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.2E-49 T 29-03-2018 IPR013842 GTP-binding protein LepA, C-terminal CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.5E-53 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 172 3.8E-18 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 1.7E-302 T 29-03-2018 IPR006297 Elongation factor 4 GO:0005525 CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 Gene3D G3DSA:3.30.70.870 288 367 1.5E-26 T 29-03-2018 CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 SUPERFAMILY SSF54980 400 493 5.28E-25 T 29-03-2018 IPR035647 EF-G domain III/V-like CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 307.239 T 29-03-2018 IPR006297 Elongation factor 4 GO:0005525 CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 Gene3D G3DSA:2.40.30.10 188 287 3.2E-23 T 29-03-2018 CVS42_RS03780 699a384075bc2a4fb89c176a0a2d8c99 597 SUPERFAMILY SSF54980 292 370 1.62E-18 T 29-03-2018 IPR035647 EF-G domain III/V-like CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 Gene3D G3DSA:3.50.50.60 274 436 3.6E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 SUPERFAMILY SSF46548 33 134 8.89E-23 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 SUPERFAMILY SSF54862 459 543 2.93E-16 T 29-03-2018 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 SUPERFAMILY SSF54862 28 48 2.93E-16 T 29-03-2018 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 Pfam PF00037 4Fe-4S binding domain 517 540 1.4E-5 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 Gene3D G3DSA:3.30.70.20 505 548 1.1E-8 T 29-03-2018 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 127 146 1.8E-17 T 29-03-2018 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 278 1.8E-17 T 29-03-2018 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 379 401 1.8E-17 T 29-03-2018 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 351 367 1.8E-17 T 29-03-2018 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 Gene3D G3DSA:1.10.1060.10 30 124 3.9E-26 T 29-03-2018 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 Gene3D G3DSA:1.10.1060.10 447 504 2.1E-5 T 29-03-2018 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 125 413 3.1E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 Gene3D G3DSA:3.40.50.720 125 220 1.8E-18 T 29-03-2018 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 34 112 1.0E-17 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 524 535 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 Gene3D G3DSA:3.50.50.60 221 273 3.0E-17 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 256 280 1.9E-12 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 148 1.9E-12 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 389 407 1.9E-12 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS14030 8573fe2b302053caac13b026b93cad93 548 SUPERFAMILY SSF51971 124 360 2.77E-53 T 29-03-2018 CVS42_RS12140 b29c777edd2a40adc843173ee042b2bf 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 102 19.42 T 29-03-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CVS42_RS12140 b29c777edd2a40adc843173ee042b2bf 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 9 97 5.3E-23 T 29-03-2018 CVS42_RS01770 c656700353afc55406c7ccfec287936e 366 Gene3D G3DSA:2.40.50.100 158 286 2.1E-6 T 29-03-2018 CVS42_RS01770 c656700353afc55406c7ccfec287936e 366 Gene3D G3DSA:2.40.50.100 56 129 1.7E-10 T 29-03-2018 CVS42_RS01770 c656700353afc55406c7ccfec287936e 366 SUPERFAMILY SSF111369 45 267 2.22E-19 T 29-03-2018 CVS42_RS01770 c656700353afc55406c7ccfec287936e 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 264 1.3E-16 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CVS42_RS01770 c656700353afc55406c7ccfec287936e 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 350 6.2E-53 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CVS42_RS07220 6e83e336848e700417c5c9b9f3708461 129 Pfam PF01597 Glycine cleavage H-protein 8 128 1.3E-47 T 29-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate CVS42_RS07220 6e83e336848e700417c5c9b9f3708461 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CVS42_RS07220 6e83e336848e700417c5c9b9f3708461 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 41.557 T 29-03-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CVS42_RS07220 6e83e336848e700417c5c9b9f3708461 129 Gene3D G3DSA:2.40.50.100 6 129 7.2E-49 T 29-03-2018 CVS42_RS07220 6e83e336848e700417c5c9b9f3708461 129 SUPERFAMILY SSF51230 4 128 1.83E-45 T 29-03-2018 IPR011053 Single hybrid motif CVS42_RS07220 6e83e336848e700417c5c9b9f3708461 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 129 3.7E-55 T 29-03-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CVS42_RS05460 b7507cc3e432a8e84bedb35acb33ebe4 559 Pfam PF08345 Flagellar M-ring protein C-terminal 259 428 1.1E-44 T 29-03-2018 IPR013556 Flagellar M-ring C-terminal CVS42_RS05460 b7507cc3e432a8e84bedb35acb33ebe4 559 PRINTS PR01009 Flagellar M-ring protein signature 272 290 9.2E-22 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CVS42_RS05460 b7507cc3e432a8e84bedb35acb33ebe4 559 PRINTS PR01009 Flagellar M-ring protein signature 202 220 9.2E-22 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CVS42_RS05460 b7507cc3e432a8e84bedb35acb33ebe4 559 PRINTS PR01009 Flagellar M-ring protein signature 128 146 9.2E-22 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CVS42_RS05460 b7507cc3e432a8e84bedb35acb33ebe4 559 PRINTS PR01009 Flagellar M-ring protein signature 160 174 9.2E-22 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CVS42_RS05460 b7507cc3e432a8e84bedb35acb33ebe4 559 PRINTS PR01009 Flagellar M-ring protein signature 352 376 9.2E-22 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CVS42_RS05460 b7507cc3e432a8e84bedb35acb33ebe4 559 PIRSF PIRSF004862 10 559 2.2E-123 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CVS42_RS05460 b7507cc3e432a8e84bedb35acb33ebe4 559 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 13 556 6.0E-73 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CVS42_RS05460 b7507cc3e432a8e84bedb35acb33ebe4 559 Pfam PF01514 Secretory protein of YscJ/FliF family 37 226 1.1E-48 T 29-03-2018 IPR006182 Secretory protein YscJ/FliF CVS42_RS16025 fa180bf12f37cfe4d3dbca31b53a6535 843 Gene3D G3DSA:3.10.20.310 352 389 0.006 T 29-03-2018 CVS42_RS16025 fa180bf12f37cfe4d3dbca31b53a6535 843 Gene3D G3DSA:2.40.160.50 390 843 1.0E-81 T 29-03-2018 CVS42_RS16025 fa180bf12f37cfe4d3dbca31b53a6535 843 Pfam PF01103 Surface antigen 450 843 7.7E-85 T 29-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CVS42_RS16025 fa180bf12f37cfe4d3dbca31b53a6535 843 Gene3D G3DSA:3.10.20.310 268 348 5.9E-8 T 29-03-2018 CVS42_RS16025 fa180bf12f37cfe4d3dbca31b53a6535 843 Gene3D G3DSA:3.10.20.310 177 267 2.8E-20 T 29-03-2018 CVS42_RS16025 fa180bf12f37cfe4d3dbca31b53a6535 843 Gene3D G3DSA:3.10.20.310 24 93 2.9E-7 T 29-03-2018 CVS42_RS16025 fa180bf12f37cfe4d3dbca31b53a6535 843 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 8 843 25.356 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CVS42_RS16025 fa180bf12f37cfe4d3dbca31b53a6535 843 Gene3D G3DSA:3.10.20.310 94 176 1.0E-12 T 29-03-2018 CVS42_RS16025 fa180bf12f37cfe4d3dbca31b53a6535 843 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 26 843 6.7E-273 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CVS42_RS16025 fa180bf12f37cfe4d3dbca31b53a6535 843 Pfam PF07244 Surface antigen variable number repeat 349 423 3.2E-16 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CVS42_RS16025 fa180bf12f37cfe4d3dbca31b53a6535 843 Pfam PF07244 Surface antigen variable number repeat 178 265 1.9E-14 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CVS42_RS16025 fa180bf12f37cfe4d3dbca31b53a6535 843 Pfam PF07244 Surface antigen variable number repeat 94 174 2.6E-11 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CVS42_RS16025 fa180bf12f37cfe4d3dbca31b53a6535 843 Pfam PF07244 Surface antigen variable number repeat 268 346 3.9E-7 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CVS42_RS16025 fa180bf12f37cfe4d3dbca31b53a6535 843 PIRSF PIRSF006076 1 843 8.0E-245 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CVS42_RS13400 31c41f10533bfd1c2509c043fe1715c7 287 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 58 278 3.5E-67 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS13400 31c41f10533bfd1c2509c043fe1715c7 287 Gene3D G3DSA:3.40.190.10 175 282 3.0E-17 T 29-03-2018 CVS42_RS13400 31c41f10533bfd1c2509c043fe1715c7 287 SUPERFAMILY SSF53850 27 279 1.12E-74 T 29-03-2018 CVS42_RS13400 31c41f10533bfd1c2509c043fe1715c7 287 Gene3D G3DSA:3.40.190.10 17 174 9.7E-42 T 29-03-2018 CVS42_RS13400 31c41f10533bfd1c2509c043fe1715c7 287 SMART SM00062 57 280 2.4E-67 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS13400 31c41f10533bfd1c2509c043fe1715c7 287 SMART SM00079 57 279 1.0E-4 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CVS42_RS13400 31c41f10533bfd1c2509c043fe1715c7 287 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 80 93 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CVS42_RS09210 a5ffca4bf3f105f7dd9e1a59410ecbd4 125 SUPERFAMILY SSF50685 32 123 9.77E-19 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CVS42_RS09210 a5ffca4bf3f105f7dd9e1a59410ecbd4 125 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 8 125 20.507 T 29-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 CVS42_RS09210 a5ffca4bf3f105f7dd9e1a59410ecbd4 125 Gene3D G3DSA:2.40.40.10 13 125 1.2E-24 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CVS42_RS09210 a5ffca4bf3f105f7dd9e1a59410ecbd4 125 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 35 125 5.3E-36 T 29-03-2018 IPR012997 Rare lipoprotein A CVS42_RS09210 a5ffca4bf3f105f7dd9e1a59410ecbd4 125 Pfam PF03330 Lytic transglycolase 33 122 1.6E-24 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CVS42_RS04525 7e1d6607275bbbbbe77926b0120d5a35 387 SUPERFAMILY SSF51905 4 176 5.88E-60 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS04525 7e1d6607275bbbbbe77926b0120d5a35 387 SUPERFAMILY SSF51905 265 378 5.88E-60 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS04525 7e1d6607275bbbbbe77926b0120d5a35 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 7.0E-20 T 29-03-2018 CVS42_RS04525 7e1d6607275bbbbbe77926b0120d5a35 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 7.0E-20 T 29-03-2018 CVS42_RS04525 7e1d6607275bbbbbe77926b0120d5a35 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 7.0E-20 T 29-03-2018 CVS42_RS04525 7e1d6607275bbbbbe77926b0120d5a35 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 7.0E-20 T 29-03-2018 CVS42_RS04525 7e1d6607275bbbbbe77926b0120d5a35 387 Gene3D G3DSA:3.50.50.60 1 356 7.4E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS04525 7e1d6607275bbbbbe77926b0120d5a35 387 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 385 3.7E-114 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CVS42_RS04525 7e1d6607275bbbbbe77926b0120d5a35 387 Pfam PF01494 FAD binding domain 4 335 1.7E-34 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 CVS42_RS08080 743cf72086448a5c201bba0c5ff4bbaa 140 SUPERFAMILY SSF143737 19 121 8.5E-43 T 29-03-2018 CVS42_RS08080 743cf72086448a5c201bba0c5ff4bbaa 140 Gene3D G3DSA:3.30.450.20 33 125 6.6E-41 T 29-03-2018 CVS42_RS08080 743cf72086448a5c201bba0c5ff4bbaa 140 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 25 122 5.9E-41 T 29-03-2018 IPR009320 Antitoxin CbeA GO:0051495 CVS42_RS19990 f1f5c36c2afdc490ef804480bdb3b612 221 SUPERFAMILY SSF46785 6 84 1.51E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS19990 f1f5c36c2afdc490ef804480bdb3b612 221 Gene3D G3DSA:1.10.10.10 2 73 2.5E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS19990 f1f5c36c2afdc490ef804480bdb3b612 221 SUPERFAMILY SSF48008 78 212 1.36E-19 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CVS42_RS19990 f1f5c36c2afdc490ef804480bdb3b612 221 SMART SM00345 12 70 1.3E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS19990 f1f5c36c2afdc490ef804480bdb3b612 221 Pfam PF07729 FCD domain 80 206 2.6E-19 T 29-03-2018 IPR011711 GntR, C-terminal CVS42_RS19990 f1f5c36c2afdc490ef804480bdb3b612 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 1.9E-14 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS19990 f1f5c36c2afdc490ef804480bdb3b612 221 Gene3D G3DSA:1.20.120.530 74 221 4.2E-25 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CVS42_RS19990 f1f5c36c2afdc490ef804480bdb3b612 221 SMART SM00895 80 206 1.5E-12 T 29-03-2018 IPR011711 GntR, C-terminal CVS42_RS06880 4a10efd5fc3597341ae4cb08870fbfb6 712 SMART SM00267 544 711 1.1E-31 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS06880 4a10efd5fc3597341ae4cb08870fbfb6 712 SUPERFAMILY SSF55073 560 705 4.0E-31 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS06880 4a10efd5fc3597341ae4cb08870fbfb6 712 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 551 705 1.1E-27 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS06880 4a10efd5fc3597341ae4cb08870fbfb6 712 Pfam PF00990 Diguanylate cyclase, GGDEF domain 555 705 9.4E-31 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS06880 4a10efd5fc3597341ae4cb08870fbfb6 712 Gene3D G3DSA:3.30.70.270 548 709 7.4E-39 T 29-03-2018 CVS42_RS14295 2115581cd6c00e282cdf2009f4772c12 336 Gene3D G3DSA:3.40.50.2300 66 171 5.8E-25 T 29-03-2018 CVS42_RS14295 2115581cd6c00e282cdf2009f4772c12 336 Gene3D G3DSA:3.40.50.2300 172 334 4.5E-22 T 29-03-2018 CVS42_RS14295 2115581cd6c00e282cdf2009f4772c12 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 56 2.7E-15 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS14295 2115581cd6c00e282cdf2009f4772c12 336 SUPERFAMILY SSF53822 66 321 2.16E-46 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CVS42_RS14295 2115581cd6c00e282cdf2009f4772c12 336 SUPERFAMILY SSF47413 7 63 4.33E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS14295 2115581cd6c00e282cdf2009f4772c12 336 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 70 239 8.7E-14 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CVS42_RS14295 2115581cd6c00e282cdf2009f4772c12 336 SMART SM00354 6 79 2.2E-25 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS14295 2115581cd6c00e282cdf2009f4772c12 336 Gene3D G3DSA:1.10.260.40 7 65 2.1E-19 T 29-03-2018 CVS42_RS20825 2cca61cfef21f017c6635a9a57f1e40f 234 SUPERFAMILY SSF51735 2 230 2.38E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS20825 2cca61cfef21f017c6635a9a57f1e40f 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 215 4.3E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS20825 2cca61cfef21f017c6635a9a57f1e40f 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 4.3E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS20825 2cca61cfef21f017c6635a9a57f1e40f 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 4.3E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS20825 2cca61cfef21f017c6635a9a57f1e40f 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 4.3E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS20825 2cca61cfef21f017c6635a9a57f1e40f 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 4.3E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS20825 2cca61cfef21f017c6635a9a57f1e40f 234 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CVS42_RS20825 2cca61cfef21f017c6635a9a57f1e40f 234 Gene3D G3DSA:3.40.50.720 1 234 5.8E-45 T 29-03-2018 CVS42_RS20825 2cca61cfef21f017c6635a9a57f1e40f 234 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 228 5.1E-27 T 29-03-2018 CVS42_RS06610 ea3760e2526dcfe320ac2a3cf385fae0 229 Gene3D G3DSA:1.20.1080.10 1 229 2.4E-70 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CVS42_RS06610 ea3760e2526dcfe320ac2a3cf385fae0 229 PRINTS PR00783 Major intrinsic protein family signature 165 187 5.4E-53 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS06610 ea3760e2526dcfe320ac2a3cf385fae0 229 PRINTS PR00783 Major intrinsic protein family signature 204 224 5.4E-53 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS06610 ea3760e2526dcfe320ac2a3cf385fae0 229 PRINTS PR00783 Major intrinsic protein family signature 2 21 5.4E-53 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS06610 ea3760e2526dcfe320ac2a3cf385fae0 229 PRINTS PR00783 Major intrinsic protein family signature 135 153 5.4E-53 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS06610 ea3760e2526dcfe320ac2a3cf385fae0 229 PRINTS PR00783 Major intrinsic protein family signature 42 66 5.4E-53 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS06610 ea3760e2526dcfe320ac2a3cf385fae0 229 PRINTS PR00783 Major intrinsic protein family signature 79 98 5.4E-53 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS06610 ea3760e2526dcfe320ac2a3cf385fae0 229 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 228 36.026 T 29-03-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 CVS42_RS06610 ea3760e2526dcfe320ac2a3cf385fae0 229 Pfam PF00230 Major intrinsic protein 2 221 3.2E-50 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS06610 ea3760e2526dcfe320ac2a3cf385fae0 229 SUPERFAMILY SSF81338 2 225 2.49E-67 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CVS42_RS06610 ea3760e2526dcfe320ac2a3cf385fae0 229 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 221 1.6E-59 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS06610 ea3760e2526dcfe320ac2a3cf385fae0 229 ProSitePatterns PS00221 MIP family signature. 60 68 - T 29-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CVS42_RS17380 f977f0ec5c1a3bd474976e3dc1a5ca8d 371 Gene3D G3DSA:3.30.200.20 13 137 1.7E-27 T 29-03-2018 CVS42_RS17380 f977f0ec5c1a3bd474976e3dc1a5ca8d 371 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 6 370 4.2E-205 T 29-03-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CVS42_RS17380 f977f0ec5c1a3bd474976e3dc1a5ca8d 371 Pfam PF01259 SAICAR synthetase 26 299 4.0E-46 T 29-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CVS42_RS17380 f977f0ec5c1a3bd474976e3dc1a5ca8d 371 Gene3D G3DSA:3.30.470.20 138 288 4.0E-38 T 29-03-2018 CVS42_RS17380 f977f0ec5c1a3bd474976e3dc1a5ca8d 371 SUPERFAMILY SSF56104 18 349 1.01E-65 T 29-03-2018 CVS42_RS17380 f977f0ec5c1a3bd474976e3dc1a5ca8d 371 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 23 346 20.603 T 29-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CVS42_RS18275 da06652af7f65ef43079bc8c038f72c2 216 SUPERFAMILY SSF161098 4 197 6.93E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS18275 da06652af7f65ef43079bc8c038f72c2 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 3 106 1.5E-16 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CVS42_RS18275 da06652af7f65ef43079bc8c038f72c2 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 201 2.3E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS18275 da06652af7f65ef43079bc8c038f72c2 216 Gene3D G3DSA:1.10.3720.10 2 215 3.4E-33 T 29-03-2018 CVS42_RS01080 ed2bc6938daeba895127f7e23cfd7a5f 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 9.4E-66 T 29-03-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CVS42_RS01080 ed2bc6938daeba895127f7e23cfd7a5f 201 SUPERFAMILY SSF52166 10 200 1.2E-73 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CVS42_RS01080 ed2bc6938daeba895127f7e23cfd7a5f 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 1.5E-76 T 29-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01080 ed2bc6938daeba895127f7e23cfd7a5f 201 Gene3D G3DSA:3.40.1370.10 3 140 5.4E-49 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CVS42_RS01080 ed2bc6938daeba895127f7e23cfd7a5f 201 Gene3D G3DSA:3.40.1370.10 141 199 1.6E-11 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CVS42_RS01080 ed2bc6938daeba895127f7e23cfd7a5f 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 34.196 T 29-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS03685 445ce5bbae15e8631c34da627c26ec7a 387 PIRSF PIRSF000724 1 387 2.6E-133 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03685 445ce5bbae15e8631c34da627c26ec7a 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 29-03-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03685 445ce5bbae15e8631c34da627c26ec7a 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.602 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03685 445ce5bbae15e8631c34da627c26ec7a 387 Gene3D G3DSA:3.40.50.1260 175 371 8.3E-75 T 29-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03685 445ce5bbae15e8631c34da627c26ec7a 387 SUPERFAMILY SSF53748 3 383 4.71E-144 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03685 445ce5bbae15e8631c34da627c26ec7a 387 Pfam PF00162 Phosphoglycerate kinase 6 373 4.8E-138 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03685 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 7.0E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03685 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 7.0E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03685 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 7.0E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03685 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 7.0E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03685 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 7.0E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03685 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 7.0E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03685 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 7.0E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03685 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 7.0E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03685 445ce5bbae15e8631c34da627c26ec7a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 7.0E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS03685 445ce5bbae15e8631c34da627c26ec7a 387 Gene3D G3DSA:3.40.50.1260 3 174 3.1E-61 T 29-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS16680 17872637caa0f6d541f11382062a5704 158 Gene3D G3DSA:1.10.287.180 3 76 7.0E-33 T 29-03-2018 CVS42_RS16680 17872637caa0f6d541f11382062a5704 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CVS42_RS16680 17872637caa0f6d541f11382062a5704 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.771 T 29-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CVS42_RS16680 17872637caa0f6d541f11382062a5704 158 Gene3D G3DSA:3.10.50.30 77 158 1.6E-26 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CVS42_RS16680 17872637caa0f6d541f11382062a5704 158 SUPERFAMILY SSF46557 3 78 2.49E-29 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CVS42_RS16680 17872637caa0f6d541f11382062a5704 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CVS42_RS16680 17872637caa0f6d541f11382062a5704 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.5E-31 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CVS42_RS16680 17872637caa0f6d541f11382062a5704 158 SUPERFAMILY SSF54534 81 157 3.4E-24 T 29-03-2018 CVS42_RS16680 17872637caa0f6d541f11382062a5704 158 PIRSF PIRSF006092 1 158 5.8E-54 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CVS42_RS16680 17872637caa0f6d541f11382062a5704 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 7.8E-28 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CVS42_RS16680 17872637caa0f6d541f11382062a5704 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 1.2E-58 T 29-03-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CVS42_RS15940 d9f5a703e3ba38829e79c42da09b155a 501 SUPERFAMILY SSF103473 10 201 3.14E-25 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS15940 d9f5a703e3ba38829e79c42da09b155a 501 SUPERFAMILY SSF103473 245 481 3.14E-25 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS15940 d9f5a703e3ba38829e79c42da09b155a 501 Gene3D G3DSA:1.20.1250.20 2 199 3.1E-22 T 29-03-2018 CVS42_RS15940 d9f5a703e3ba38829e79c42da09b155a 501 Pfam PF00854 POT family 83 443 2.7E-85 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CVS42_RS15940 d9f5a703e3ba38829e79c42da09b155a 501 Gene3D G3DSA:1.20.1250.20 263 492 2.4E-10 T 29-03-2018 CVS42_RS15940 d9f5a703e3ba38829e79c42da09b155a 501 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 146 158 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CVS42_RS15940 d9f5a703e3ba38829e79c42da09b155a 501 Hamap MF_01879 Dipeptide and tripeptide permease B [dtpB]. 4 487 44.923 T 29-03-2018 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B CVS42_RS15940 d9f5a703e3ba38829e79c42da09b155a 501 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 10 484 3.3E-212 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CVS42_RS05165 c4daf579da665940d6ef596bd712f259 290 Gene3D G3DSA:3.30.420.40 3 127 2.0E-17 T 29-03-2018 CVS42_RS05165 c4daf579da665940d6ef596bd712f259 290 SUPERFAMILY SSF53067 115 280 3.18E-39 T 29-03-2018 CVS42_RS05165 c4daf579da665940d6ef596bd712f259 290 Gene3D G3DSA:3.30.420.40 128 264 4.0E-30 T 29-03-2018 CVS42_RS05165 c4daf579da665940d6ef596bd712f259 290 SUPERFAMILY SSF53067 2 112 1.94E-20 T 29-03-2018 CVS42_RS05165 c4daf579da665940d6ef596bd712f259 290 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 279 3.7E-28 T 29-03-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CVS42_RS22040 7193fe3fcb184ebf8171d61a5ff539a4 220 Gene3D G3DSA:3.30.1150.10 27 220 1.5E-18 T 29-03-2018 CVS42_RS22040 7193fe3fcb184ebf8171d61a5ff539a4 220 PRINTS PR01374 Gram-negative bacterial tonB protein signature 62 72 2.7E-16 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CVS42_RS22040 7193fe3fcb184ebf8171d61a5ff539a4 220 PRINTS PR01374 Gram-negative bacterial tonB protein signature 178 195 2.7E-16 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CVS42_RS22040 7193fe3fcb184ebf8171d61a5ff539a4 220 PRINTS PR01374 Gram-negative bacterial tonB protein signature 159 177 2.7E-16 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CVS42_RS22040 7193fe3fcb184ebf8171d61a5ff539a4 220 PRINTS PR01374 Gram-negative bacterial tonB protein signature 138 159 2.7E-16 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CVS42_RS22040 7193fe3fcb184ebf8171d61a5ff539a4 220 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 143 217 1.4E-18 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CVS42_RS22040 7193fe3fcb184ebf8171d61a5ff539a4 220 SUPERFAMILY SSF74653 136 202 1.7E-21 T 29-03-2018 CVS42_RS22040 7193fe3fcb184ebf8171d61a5ff539a4 220 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 144 218 2.8E-20 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CVS42_RS06370 3a123e6ab39229ce4e74dd45bf786e09 331 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 29-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 CVS42_RS06370 3a123e6ab39229ce4e74dd45bf786e09 331 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 331 6.7E-104 T 29-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 CVS42_RS06370 3a123e6ab39229ce4e74dd45bf786e09 331 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 4 331 38.132 T 29-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 CVS42_RS06370 3a123e6ab39229ce4e74dd45bf786e09 331 Gene3D G3DSA:3.20.20.70 2 331 2.3E-73 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS06370 3a123e6ab39229ce4e74dd45bf786e09 331 SMART SM00729 13 221 4.5E-7 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CVS42_RS06370 3a123e6ab39229ce4e74dd45bf786e09 331 Pfam PF04055 Radical SAM superfamily 18 182 4.0E-31 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS06370 3a123e6ab39229ce4e74dd45bf786e09 331 Pfam PF06463 Molybdenum Cofactor Synthesis C 188 314 6.8E-38 T 29-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 CVS42_RS06370 3a123e6ab39229ce4e74dd45bf786e09 331 Pfam PF13353 4Fe-4S single cluster domain 22 127 1.1E-7 T 29-03-2018 CVS42_RS06370 3a123e6ab39229ce4e74dd45bf786e09 331 SUPERFAMILY SSF102114 3 283 1.83E-73 T 29-03-2018 CVS42_RS20955 a290d57780bc8d40194214cb9a8ad0da 154 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 4.6E-32 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CVS42_RS20955 a290d57780bc8d40194214cb9a8ad0da 154 SUPERFAMILY SSF54893 2 100 2.35E-35 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CVS42_RS20955 a290d57780bc8d40194214cb9a8ad0da 154 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 5.0E-32 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CVS42_RS20955 a290d57780bc8d40194214cb9a8ad0da 154 SUPERFAMILY SSF57825 101 151 1.96E-14 T 29-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CVS42_RS20955 a290d57780bc8d40194214cb9a8ad0da 154 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.555 T 29-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 CVS42_RS20955 a290d57780bc8d40194214cb9a8ad0da 154 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 103 150 2.9E-18 T 29-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CVS42_RS20955 a290d57780bc8d40194214cb9a8ad0da 154 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 3.5E-56 T 29-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 CVS42_RS20955 a290d57780bc8d40194214cb9a8ad0da 154 Gene3D G3DSA:2.30.30.20 102 150 1.0E-16 T 29-03-2018 CVS42_RS20955 a290d57780bc8d40194214cb9a8ad0da 154 Gene3D G3DSA:3.30.70.140 5 97 2.6E-34 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CVS42_RS21705 d89db3031d0182a3706183574a1c6821 205 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 81 110 - T 29-03-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CVS42_RS21705 d89db3031d0182a3706183574a1c6821 205 Gene3D G3DSA:3.30.230.30 7 135 1.4E-36 T 29-03-2018 IPR001498 Impact, N-terminal CVS42_RS21705 d89db3031d0182a3706183574a1c6821 205 Gene3D G3DSA:3.30.70.240 137 200 9.2E-16 T 29-03-2018 CVS42_RS21705 d89db3031d0182a3706183574a1c6821 205 SUPERFAMILY SSF54980 137 203 1.51E-14 T 29-03-2018 IPR035647 EF-G domain III/V-like CVS42_RS21705 d89db3031d0182a3706183574a1c6821 205 Pfam PF09186 Domain of unknown function (DUF1949) 142 197 4.2E-15 T 29-03-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CVS42_RS21705 d89db3031d0182a3706183574a1c6821 205 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 200 4.8E-64 T 29-03-2018 IPR015796 Impact family, bacterial/archaeal CVS42_RS21705 d89db3031d0182a3706183574a1c6821 205 SUPERFAMILY SSF54211 4 131 1.29E-40 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS21705 d89db3031d0182a3706183574a1c6821 205 Pfam PF01205 Uncharacterized protein family UPF0029 19 123 1.3E-25 T 29-03-2018 IPR001498 Impact, N-terminal CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 SUPERFAMILY SSF52374 176 388 7.68E-102 T 29-03-2018 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 SUPERFAMILY SSF52374 4 141 7.68E-102 T 29-03-2018 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 Gene3D G3DSA:2.20.28.20 142 165 7.8E-16 T 29-03-2018 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 Pfam PF09334 tRNA synthetases class I (M) 8 397 1.3E-163 T 29-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 Pfam PF08264 Anticodon-binding domain of tRNA 417 503 2.5E-6 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 Gene3D G3DSA:2.40.50.140 568 677 7.2E-30 T 29-03-2018 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 252 263 1.2E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 1.2E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 1.2E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 1.2E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 1.2E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 1.2E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 546 41.209 T 29-03-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 Gene3D G3DSA:1.10.730.10 374 537 6.4E-36 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 SUPERFAMILY SSF57770 142 176 1.57E-12 T 29-03-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 Gene3D G3DSA:3.40.50.620 252 370 1.1E-21 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 SUPERFAMILY SSF47323 390 548 4.67E-46 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 SUPERFAMILY SSF50249 571 676 1.35E-32 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 Gene3D G3DSA:2.170.220.10 166 251 5.8E-20 T 29-03-2018 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 Pfam PF01588 Putative tRNA binding domain 582 674 3.1E-24 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 543 677 8.0E-47 T 29-03-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 536 2.6E-198 T 29-03-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CVS42_RS09520 41ae533b1ef3cfa77c39264a708355de 677 Gene3D G3DSA:3.40.50.620 4 77 3.5E-23 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS17425 2223f29331498970f1fdffb175c26c0c 106 SMART SM00278 83 102 36.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CVS42_RS17425 2223f29331498970f1fdffb175c26c0c 106 SMART SM00278 53 72 0.0094 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CVS42_RS17425 2223f29331498970f1fdffb175c26c0c 106 Gene3D G3DSA:1.10.150.310 62 106 3.5E-17 T 29-03-2018 CVS42_RS17425 2223f29331498970f1fdffb175c26c0c 106 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 41 105 1.5E-25 T 29-03-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CVS42_RS17425 2223f29331498970f1fdffb175c26c0c 106 SUPERFAMILY SSF47781 31 105 5.11E-31 T 29-03-2018 IPR010994 RuvA domain 2-like CVS42_RS17425 2223f29331498970f1fdffb175c26c0c 106 Pfam PF12836 Helix-hairpin-helix motif 42 103 4.3E-24 T 29-03-2018 CVS42_RS17425 2223f29331498970f1fdffb175c26c0c 106 Gene3D G3DSA:1.10.150.20 23 61 9.0E-9 T 29-03-2018 CVS42_RS03025 344916e7a79b81185dc3cf3178e0f309 475 SUPERFAMILY SSF50447 242 327 4.86E-23 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CVS42_RS03025 344916e7a79b81185dc3cf3178e0f309 475 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 472 53.781 T 29-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CVS42_RS03025 344916e7a79b81185dc3cf3178e0f309 475 Gene3D G3DSA:3.40.50.300 3 237 2.9E-43 T 29-03-2018 CVS42_RS03025 344916e7a79b81185dc3cf3178e0f309 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 212 3.5E-14 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CVS42_RS03025 344916e7a79b81185dc3cf3178e0f309 475 Gene3D G3DSA:2.40.30.10 238 327 4.4E-21 T 29-03-2018 CVS42_RS03025 344916e7a79b81185dc3cf3178e0f309 475 PRINTS PR00315 GTP-binding elongation factor signature 162 171 9.3E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS03025 344916e7a79b81185dc3cf3178e0f309 475 PRINTS PR00315 GTP-binding elongation factor signature 89 97 9.3E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS03025 344916e7a79b81185dc3cf3178e0f309 475 PRINTS PR00315 GTP-binding elongation factor signature 28 41 9.3E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS03025 344916e7a79b81185dc3cf3178e0f309 475 PRINTS PR00315 GTP-binding elongation factor signature 109 119 9.3E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS03025 344916e7a79b81185dc3cf3178e0f309 475 PRINTS PR00315 GTP-binding elongation factor signature 125 136 9.3E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS03025 344916e7a79b81185dc3cf3178e0f309 475 SUPERFAMILY SSF52540 20 233 4.12E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS03025 344916e7a79b81185dc3cf3178e0f309 475 SUPERFAMILY SSF50465 330 433 1.39E-32 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CVS42_RS03025 344916e7a79b81185dc3cf3178e0f309 475 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CVS42_RS03025 344916e7a79b81185dc3cf3178e0f309 475 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 432 1.5E-200 T 29-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CVS42_RS03025 344916e7a79b81185dc3cf3178e0f309 475 Gene3D G3DSA:2.40.30.10 329 434 2.7E-23 T 29-03-2018 CVS42_RS03025 344916e7a79b81185dc3cf3178e0f309 475 Pfam PF00009 Elongation factor Tu GTP binding domain 26 212 4.4E-44 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS15995 cbf7e0400cadc52ddf1fb21e2013e77f 196 Hamap MF_00052_B Ribonuclease HII [rnhB]. 10 189 37.979 T 29-03-2018 IPR022898 Ribonuclease HII GO:0004523 CVS42_RS15995 cbf7e0400cadc52ddf1fb21e2013e77f 196 Gene3D G3DSA:3.30.420.10 4 196 1.9E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS15995 cbf7e0400cadc52ddf1fb21e2013e77f 196 Pfam PF01351 Ribonuclease HII 12 187 2.0E-40 T 29-03-2018 IPR024567 Ribonuclease HII/HIII domain CVS42_RS15995 cbf7e0400cadc52ddf1fb21e2013e77f 196 SUPERFAMILY SSF53098 6 194 4.86E-69 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS07315 49f59a6f487b23e3a6b0f9d6cc41766a 271 PIRSF PIRSF028756 1 266 4.8E-135 T 29-03-2018 IPR016898 Polyphosphate kinase 2 CVS42_RS07315 49f59a6f487b23e3a6b0f9d6cc41766a 271 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 12 237 2.2E-117 T 29-03-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 CVS42_RS07315 49f59a6f487b23e3a6b0f9d6cc41766a 271 Gene3D G3DSA:3.40.50.300 1 256 1.6E-104 T 29-03-2018 CVS42_RS07315 49f59a6f487b23e3a6b0f9d6cc41766a 271 SUPERFAMILY SSF52540 43 232 1.57E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS07315 49f59a6f487b23e3a6b0f9d6cc41766a 271 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 12 236 8.1E-113 T 29-03-2018 IPR022488 Polyphosphate kinase-2-related CVS42_RS02815 538ea81b7365338506c9da2f8eb7a2b4 378 PIRSF PIRSF000267 2 377 7.1E-117 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CVS42_RS02815 538ea81b7365338506c9da2f8eb7a2b4 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 360 8.9E-103 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CVS42_RS02815 538ea81b7365338506c9da2f8eb7a2b4 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 1.2E-156 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CVS42_RS00995 fa9b8be20cb49e249a7f68a6aae43206 509 SUPERFAMILY SSF53649 307 505 1.11E-77 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CVS42_RS00995 fa9b8be20cb49e249a7f68a6aae43206 509 SUPERFAMILY SSF53649 5 79 1.11E-77 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CVS42_RS00995 fa9b8be20cb49e249a7f68a6aae43206 509 SUPERFAMILY SSF64158 79 306 6.28E-84 T 29-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS00995 fa9b8be20cb49e249a7f68a6aae43206 509 PIRSF PIRSF001492 1 509 1.3E-204 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS00995 fa9b8be20cb49e249a7f68a6aae43206 509 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 84 295 9.0E-80 T 29-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS00995 fa9b8be20cb49e249a7f68a6aae43206 509 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 506 2.3E-227 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS00995 fa9b8be20cb49e249a7f68a6aae43206 509 Gene3D G3DSA:3.40.1450.10 79 299 6.7E-92 T 29-03-2018 CVS42_RS00995 fa9b8be20cb49e249a7f68a6aae43206 509 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 507 49.563 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CVS42_RS00995 fa9b8be20cb49e249a7f68a6aae43206 509 Pfam PF01676 Metalloenzyme superfamily 6 494 4.2E-78 T 29-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CVS42_RS00995 fa9b8be20cb49e249a7f68a6aae43206 509 Gene3D G3DSA:3.40.720.10 2 45 0.0044 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CVS42_RS00995 fa9b8be20cb49e249a7f68a6aae43206 509 Gene3D G3DSA:3.40.720.10 300 508 6.1E-37 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CVS42_RS11435 dc202814aeaad742478fb3891d9efdef 411 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 8 411 2.8E-133 T 29-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CVS42_RS11435 dc202814aeaad742478fb3891d9efdef 411 Pfam PF12704 MacB-like periplasmic core domain 31 239 8.8E-17 T 29-03-2018 IPR025857 MacB-like periplasmic core domain CVS42_RS11435 dc202814aeaad742478fb3891d9efdef 411 Pfam PF02687 FtsX-like permease family 304 404 3.6E-8 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CVS42_RS18585 434f695593bfed7a9ed059490c4b66c5 355 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS18585 434f695593bfed7a9ed059490c4b66c5 355 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 4.0E-119 T 29-03-2018 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 CVS42_RS18585 434f695593bfed7a9ed059490c4b66c5 355 Pfam PF00005 ABC transporter 18 164 4.6E-37 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS18585 434f695593bfed7a9ed059490c4b66c5 355 Pfam PF12857 TOBE-like domain 288 345 1.2E-8 T 29-03-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 CVS42_RS18585 434f695593bfed7a9ed059490c4b66c5 355 SUPERFAMILY SSF52540 3 246 5.06E-88 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS18585 434f695593bfed7a9ed059490c4b66c5 355 SMART SM00382 27 214 3.0E-20 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS18585 434f695593bfed7a9ed059490c4b66c5 355 Gene3D G3DSA:3.40.50.300 1 250 1.0E-77 T 29-03-2018 CVS42_RS18585 434f695593bfed7a9ed059490c4b66c5 355 SUPERFAMILY SSF50331 240 344 3.0E-9 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CVS42_RS19675 4ba260d8ffe14ad3c4eaf4a5367b13fb 64 Gene3D G3DSA:3.30.70.100 1 64 1.4E-18 T 29-03-2018 CVS42_RS19675 4ba260d8ffe14ad3c4eaf4a5367b13fb 64 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CVS42_RS19675 4ba260d8ffe14ad3c4eaf4a5367b13fb 64 Pfam PF00403 Heavy-metal-associated domain 5 61 1.7E-15 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CVS42_RS19675 4ba260d8ffe14ad3c4eaf4a5367b13fb 64 SUPERFAMILY SSF55008 1 63 1.57E-16 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CVS42_RS13140 271288e7932bd061ef9e6bcdd999835d 302 Pfam PF00700 Bacterial flagellin C-terminal helical region 217 300 2.0E-24 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CVS42_RS13140 271288e7932bd061ef9e6bcdd999835d 302 PRINTS PR00207 Flagellin signature 37 54 1.4E-25 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CVS42_RS13140 271288e7932bd061ef9e6bcdd999835d 302 PRINTS PR00207 Flagellin signature 111 134 1.4E-25 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CVS42_RS13140 271288e7932bd061ef9e6bcdd999835d 302 PRINTS PR00207 Flagellin signature 76 95 1.4E-25 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CVS42_RS13140 271288e7932bd061ef9e6bcdd999835d 302 SUPERFAMILY SSF64518 1 301 3.4E-93 T 29-03-2018 CVS42_RS13140 271288e7932bd061ef9e6bcdd999835d 302 Gene3D G3DSA:1.20.1330.10 40 273 3.0E-71 T 29-03-2018 CVS42_RS13140 271288e7932bd061ef9e6bcdd999835d 302 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.1E-41 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CVS42_RS07175 77c83a83578d889d5794b98d19ead896 220 Pfam PF02798 Glutathione S-transferase, N-terminal domain 5 77 5.6E-16 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CVS42_RS07175 77c83a83578d889d5794b98d19ead896 220 SUPERFAMILY SSF52833 4 82 2.11E-24 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS07175 77c83a83578d889d5794b98d19ead896 220 Gene3D G3DSA:1.20.1050.10 140 196 5.4E-15 T 29-03-2018 CVS42_RS07175 77c83a83578d889d5794b98d19ead896 220 Gene3D G3DSA:1.20.1050.10 90 139 3.4E-18 T 29-03-2018 CVS42_RS07175 77c83a83578d889d5794b98d19ead896 220 SUPERFAMILY SSF47616 74 202 5.18E-37 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CVS42_RS07175 77c83a83578d889d5794b98d19ead896 220 Gene3D G3DSA:3.40.30.10 1 89 3.6E-28 T 29-03-2018 CVS42_RS07175 77c83a83578d889d5794b98d19ead896 220 Pfam PF00043 Glutathione S-transferase, C-terminal domain 114 192 9.1E-10 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CVS42_RS09010 b955a91c754bc283f4cb2c9c699135a0 611 Gene3D G3DSA:3.30.450.20 159 258 2.3E-5 T 29-03-2018 CVS42_RS09010 b955a91c754bc283f4cb2c9c699135a0 611 Gene3D G3DSA:1.10.10.60 517 611 2.5E-15 T 29-03-2018 CVS42_RS09010 b955a91c754bc283f4cb2c9c699135a0 611 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 485 494 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CVS42_RS09010 b955a91c754bc283f4cb2c9c699135a0 611 Pfam PF02954 Bacterial regulatory protein, Fis family 566 605 9.2E-12 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS09010 b955a91c754bc283f4cb2c9c699135a0 611 Gene3D G3DSA:3.40.50.300 259 456 9.2E-31 T 29-03-2018 CVS42_RS09010 b955a91c754bc283f4cb2c9c699135a0 611 SMART SM00382 291 435 4.2E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS09010 b955a91c754bc283f4cb2c9c699135a0 611 SUPERFAMILY SSF52540 271 512 7.38E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09010 b955a91c754bc283f4cb2c9c699135a0 611 SUPERFAMILY SSF55781 20 124 3.53E-6 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS09010 b955a91c754bc283f4cb2c9c699135a0 611 Gene3D G3DSA:3.30.450.40 17 139 5.1E-5 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS09010 b955a91c754bc283f4cb2c9c699135a0 611 Pfam PF00158 Sigma-54 interaction domain 271 438 1.1E-69 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CVS42_RS09010 b955a91c754bc283f4cb2c9c699135a0 611 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 295 308 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CVS42_RS09010 b955a91c754bc283f4cb2c9c699135a0 611 Gene3D G3DSA:1.10.8.60 457 516 8.4E-19 T 29-03-2018 CVS42_RS09010 b955a91c754bc283f4cb2c9c699135a0 611 SUPERFAMILY SSF46689 560 607 1.54E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS19515 c6faef5a5c1ba22f518d9d50aa0f79eb 322 SUPERFAMILY SSF55154 1 200 6.05E-43 T 29-03-2018 IPR033469 CYTH-like domain Reactome: R-HSA-196819 CVS42_RS19515 c6faef5a5c1ba22f518d9d50aa0f79eb 322 SMART SM01118 2 202 1.5E-38 T 29-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CVS42_RS19515 c6faef5a5c1ba22f518d9d50aa0f79eb 322 Gene3D G3DSA:2.40.320.10 1 200 8.3E-43 T 29-03-2018 CVS42_RS19515 c6faef5a5c1ba22f518d9d50aa0f79eb 322 Pfam PF01928 CYTH domain 3 196 2.8E-31 T 29-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CVS42_RS01245 3e76dc4f728eca79d21b81aec6f83c4c 462 Gene3D G3DSA:3.40.190.10 25 174 9.9E-22 T 29-03-2018 CVS42_RS01245 3e76dc4f728eca79d21b81aec6f83c4c 462 Pfam PF00990 Diguanylate cyclase, GGDEF domain 300 453 7.7E-36 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS01245 3e76dc4f728eca79d21b81aec6f83c4c 462 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 249 1.4E-32 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS01245 3e76dc4f728eca79d21b81aec6f83c4c 462 Gene3D G3DSA:3.40.190.10 175 254 0.0029 T 29-03-2018 CVS42_RS01245 3e76dc4f728eca79d21b81aec6f83c4c 462 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 296 456 2.4E-35 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS01245 3e76dc4f728eca79d21b81aec6f83c4c 462 SMART SM00267 289 458 8.7E-52 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS01245 3e76dc4f728eca79d21b81aec6f83c4c 462 SUPERFAMILY SSF53850 37 251 2.78E-42 T 29-03-2018 CVS42_RS01245 3e76dc4f728eca79d21b81aec6f83c4c 462 Gene3D G3DSA:3.30.70.270 283 458 3.8E-50 T 29-03-2018 CVS42_RS01245 3e76dc4f728eca79d21b81aec6f83c4c 462 SUPERFAMILY SSF55073 305 456 4.08E-40 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS01245 3e76dc4f728eca79d21b81aec6f83c4c 462 SMART SM00062 33 252 3.2E-10 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS05305 9db986bbd2b627f6b68c51c237d717ff 691 SUPERFAMILY SSF103190 160 304 3.92E-7 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CVS42_RS05305 9db986bbd2b627f6b68c51c237d717ff 691 SUPERFAMILY SSF55874 500 660 4.58E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS05305 9db986bbd2b627f6b68c51c237d717ff 691 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 553 661 4.4E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS05305 9db986bbd2b627f6b68c51c237d717ff 691 Gene3D G3DSA:1.10.287.130 381 505 1.9E-12 T 29-03-2018 CVS42_RS05305 9db986bbd2b627f6b68c51c237d717ff 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 609 1.3E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS05305 9db986bbd2b627f6b68c51c237d717ff 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 624 642 1.3E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS05305 9db986bbd2b627f6b68c51c237d717ff 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 648 661 1.3E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS05305 9db986bbd2b627f6b68c51c237d717ff 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 623 1.3E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS05305 9db986bbd2b627f6b68c51c237d717ff 691 Gene3D G3DSA:3.30.565.10 515 665 6.1E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS05305 9db986bbd2b627f6b68c51c237d717ff 691 SMART SM00387 552 664 4.7E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS05305 9db986bbd2b627f6b68c51c237d717ff 691 SUPERFAMILY SSF47384 436 507 3.92E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS05305 9db986bbd2b627f6b68c51c237d717ff 691 Pfam PF17202 Single cache domain 3 198 310 2.7E-23 T 29-03-2018 IPR033463 Single cache domain 3 CVS42_RS05305 9db986bbd2b627f6b68c51c237d717ff 691 Pfam PF00512 His Kinase A (phospho-acceptor) domain 442 506 1.8E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS05305 9db986bbd2b627f6b68c51c237d717ff 691 SMART SM00388 442 509 1.4E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS16425 d078dd299c9a5125c1994aaa4626fe36 95 Pfam PF05488 PAAR motif 20 87 5.5E-14 T 29-03-2018 IPR008727 PAAR motif CVS42_RS00420 fa5db7696aae1892738e48b4741c77cc 406 Gene3D G3DSA:3.90.1150.10 284 406 1.2E-39 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS00420 fa5db7696aae1892738e48b4741c77cc 406 PIRSF PIRSF005572 23 404 7.7E-52 T 29-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CVS42_RS00420 fa5db7696aae1892738e48b4741c77cc 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 8 406 5.7E-173 T 29-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CVS42_RS00420 fa5db7696aae1892738e48b4741c77cc 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 218 237 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CVS42_RS00420 fa5db7696aae1892738e48b4741c77cc 406 Gene3D G3DSA:3.40.640.10 34 283 2.9E-59 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS00420 fa5db7696aae1892738e48b4741c77cc 406 Pfam PF00266 Aminotransferase class-V 26 395 7.7E-151 T 29-03-2018 IPR000192 Aminotransferase class V domain CVS42_RS00420 fa5db7696aae1892738e48b4741c77cc 406 SUPERFAMILY SSF53383 6 402 1.05E-127 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS20850 50af24636a103ea84335e747bb9224bf 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 2.7E-94 T 29-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CVS42_RS20850 50af24636a103ea84335e747bb9224bf 330 SUPERFAMILY SSF55681 8 330 2.25E-97 T 29-03-2018 CVS42_RS20850 50af24636a103ea84335e747bb9224bf 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 44.696 T 29-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CVS42_RS20850 50af24636a103ea84335e747bb9224bf 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 329 2.5E-176 T 29-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CVS42_RS20850 50af24636a103ea84335e747bb9224bf 330 PIRSF PIRSF001555 1 329 3.4E-148 T 29-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CVS42_RS20850 50af24636a103ea84335e747bb9224bf 330 Gene3D G3DSA:3.30.930.10 1 328 2.8E-42 T 29-03-2018 CVS42_RS04955 a26d577ad7b122d715e20dae4a804863 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 3.3E-21 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS04955 a26d577ad7b122d715e20dae4a804863 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.601 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CVS42_RS04955 a26d577ad7b122d715e20dae4a804863 363 PIRSF PIRSF006641 1 363 8.1E-157 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CVS42_RS04955 a26d577ad7b122d715e20dae4a804863 363 SUPERFAMILY SSF52540 3 301 1.42E-82 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS04955 a26d577ad7b122d715e20dae4a804863 363 Gene3D G3DSA:3.40.50.300 1 79 4.3E-8 T 29-03-2018 CVS42_RS04955 a26d577ad7b122d715e20dae4a804863 363 SUPERFAMILY SSF81271 279 359 5.01E-36 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CVS42_RS04955 a26d577ad7b122d715e20dae4a804863 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.3E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS04955 a26d577ad7b122d715e20dae4a804863 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.3E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS04955 a26d577ad7b122d715e20dae4a804863 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.3E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS04955 a26d577ad7b122d715e20dae4a804863 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.3E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS04955 a26d577ad7b122d715e20dae4a804863 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.4E-39 T 29-03-2018 IPR013029 Domain of unknown function DUF933 Reactome: R-HSA-114608 CVS42_RS04955 a26d577ad7b122d715e20dae4a804863 363 Gene3D G3DSA:1.10.150.300 110 200 3.5E-27 T 29-03-2018 IPR023192 TGS-like domain Reactome: R-HSA-114608 CVS42_RS04955 a26d577ad7b122d715e20dae4a804863 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.7E-172 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CVS42_RS04955 a26d577ad7b122d715e20dae4a804863 363 Gene3D G3DSA:3.10.20.30 263 362 1.0E-45 T 29-03-2018 IPR012675 Beta-grasp domain CVS42_RS17540 3c5934221721b9856465b349a83ef0c1 167 SMART SM00014 57 162 1.9E-18 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CVS42_RS17540 3c5934221721b9856465b349a83ef0c1 167 SUPERFAMILY SSF48317 4 164 1.2E-36 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CVS42_RS17540 3c5934221721b9856465b349a83ef0c1 167 Pfam PF01569 PAP2 superfamily 61 164 7.0E-20 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CVS42_RS17540 3c5934221721b9856465b349a83ef0c1 167 Gene3D G3DSA:1.20.144.10 5 165 1.2E-27 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CVS42_RS06355 6baee0fc2fea4c2c2a36f92c66519710 191 Gene3D G3DSA:2.30.130.40 3 112 2.5E-19 T 29-03-2018 CVS42_RS06355 6baee0fc2fea4c2c2a36f92c66519710 191 SUPERFAMILY SSF88697 6 189 4.97E-47 T 29-03-2018 IPR015947 PUA-like domain CVS42_RS06355 6baee0fc2fea4c2c2a36f92c66519710 191 SMART SM00464 5 187 5.7E-4 T 29-03-2018 IPR003111 Lon, substrate-binding domain CVS42_RS06355 6baee0fc2fea4c2c2a36f92c66519710 191 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 6 177 1.5E-12 T 29-03-2018 IPR003111 Lon, substrate-binding domain CVS42_RS06355 6baee0fc2fea4c2c2a36f92c66519710 191 Gene3D G3DSA:1.10.4060.10 118 191 3.8E-8 T 29-03-2018 CVS42_RS11625 d2adf41c4c0cc631ed201bf7423ed9bf 424 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 15 421 51.316 T 29-03-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CVS42_RS11625 d2adf41c4c0cc631ed201bf7423ed9bf 424 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 19 395 4.0E-153 T 29-03-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CVS42_RS11625 d2adf41c4c0cc631ed201bf7423ed9bf 424 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 24 43 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CVS42_RS11625 d2adf41c4c0cc631ed201bf7423ed9bf 424 SUPERFAMILY SSF51161 309 409 5.41E-17 T 29-03-2018 IPR011004 Trimeric LpxA-like CVS42_RS11625 d2adf41c4c0cc631ed201bf7423ed9bf 424 SUPERFAMILY SSF53448 19 292 1.6E-76 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS11625 d2adf41c4c0cc631ed201bf7423ed9bf 424 SUPERFAMILY SSF53448 359 375 1.6E-76 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS11625 d2adf41c4c0cc631ed201bf7423ed9bf 424 Pfam PF00483 Nucleotidyl transferase 20 289 3.7E-68 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CVS42_RS11625 d2adf41c4c0cc631ed201bf7423ed9bf 424 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 209 219 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CVS42_RS11625 d2adf41c4c0cc631ed201bf7423ed9bf 424 Gene3D G3DSA:2.160.10.10 304 403 1.1E-8 T 29-03-2018 CVS42_RS11625 d2adf41c4c0cc631ed201bf7423ed9bf 424 Gene3D G3DSA:3.90.550.10 19 303 3.4E-64 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS11625 d2adf41c4c0cc631ed201bf7423ed9bf 424 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 111 119 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CVS42_RS18355 b6b7a25a6e83939081167feaffea5cc2 274 Gene3D G3DSA:1.10.3730.10 167 274 1.1E-29 T 29-03-2018 CVS42_RS18355 b6b7a25a6e83939081167feaffea5cc2 274 PIRSF PIRSF000193 3 272 6.4E-71 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CVS42_RS18355 b6b7a25a6e83939081167feaffea5cc2 274 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 270 1.6E-68 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CVS42_RS18355 b6b7a25a6e83939081167feaffea5cc2 274 SUPERFAMILY SSF51735 4 162 9.17E-38 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS18355 b6b7a25a6e83939081167feaffea5cc2 274 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 270 25.303 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CVS42_RS18355 b6b7a25a6e83939081167feaffea5cc2 274 SUPERFAMILY SSF48179 165 271 3.06E-28 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CVS42_RS18355 b6b7a25a6e83939081167feaffea5cc2 274 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 225 248 - T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CVS42_RS18355 b6b7a25a6e83939081167feaffea5cc2 274 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 165 270 1.8E-28 T 29-03-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CVS42_RS18355 b6b7a25a6e83939081167feaffea5cc2 274 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 101 3.0E-21 T 29-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CVS42_RS18355 b6b7a25a6e83939081167feaffea5cc2 274 Gene3D G3DSA:3.40.50.720 1 166 1.5E-30 T 29-03-2018 CVS42_RS13475 f19f2667b05301b767058b28b5ff0e8b 535 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 26 535 1.2E-252 T 29-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CVS42_RS13475 f19f2667b05301b767058b28b5ff0e8b 535 Gene3D G3DSA:1.20.1220.12 418 535 4.7E-47 T 29-03-2018 CVS42_RS13475 f19f2667b05301b767058b28b5ff0e8b 535 Gene3D G3DSA:3.20.20.360 81 417 6.4E-113 T 29-03-2018 CVS42_RS13475 f19f2667b05301b767058b28b5ff0e8b 535 PIRSF PIRSF001363 5 535 1.6E-250 T 29-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CVS42_RS13475 f19f2667b05301b767058b28b5ff0e8b 535 Pfam PF01274 Malate synthase 15 535 6.6E-208 T 29-03-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CVS42_RS13475 f19f2667b05301b767058b28b5ff0e8b 535 SUPERFAMILY SSF51645 9 534 2.75E-193 T 29-03-2018 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CVS42_RS20985 c1c8d2c4dc6227592fb1d6220523ceb3 215 PIRSF PIRSF009320 1 213 2.1E-33 T 29-03-2018 CVS42_RS20985 c1c8d2c4dc6227592fb1d6220523ceb3 215 SUPERFAMILY SSF52540 1 212 4.74E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS20985 c1c8d2c4dc6227592fb1d6220523ceb3 215 Gene3D G3DSA:3.40.50.300 1 64 1.0E-11 T 29-03-2018 CVS42_RS20985 c1c8d2c4dc6227592fb1d6220523ceb3 215 Gene3D G3DSA:3.40.50.300 65 213 5.0E-19 T 29-03-2018 CVS42_RS20985 c1c8d2c4dc6227592fb1d6220523ceb3 215 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 184 1.5E-10 T 29-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CVS42_RS18410 c6f160676c6bdaf026703acdf7be05ad 124 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 118 2.1E-40 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 CVS42_RS18410 c6f160676c6bdaf026703acdf7be05ad 124 PIRSF PIRSF006287 1 121 2.5E-41 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 CVS42_RS18410 c6f160676c6bdaf026703acdf7be05ad 124 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 118 5.0E-21 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 CVS42_RS16640 3d9d2a5d9a080fa7a71b67db570d073e 108 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 9.5E-43 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CVS42_RS16640 3d9d2a5d9a080fa7a71b67db570d073e 108 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 9.5E-43 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CVS42_RS16640 3d9d2a5d9a080fa7a71b67db570d073e 108 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 9.5E-43 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CVS42_RS16640 3d9d2a5d9a080fa7a71b67db570d073e 108 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 9.5E-43 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CVS42_RS16640 3d9d2a5d9a080fa7a71b67db570d073e 108 Pfam PF03840 Preprotein translocase SecG subunit 4 71 2.5E-22 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CVS42_RS16640 3d9d2a5d9a080fa7a71b67db570d073e 108 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 72 3.4E-26 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CVS42_RS04900 6e6c10129c9c56259bae8a0f763e03ba 241 Pfam PF01048 Phosphorylase superfamily 17 201 4.3E-32 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CVS42_RS04900 6e6c10129c9c56259bae8a0f763e03ba 241 Gene3D G3DSA:3.40.50.1580 10 241 2.8E-48 T 29-03-2018 CVS42_RS04900 6e6c10129c9c56259bae8a0f763e03ba 241 SUPERFAMILY SSF53167 3 239 6.81E-62 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CVS42_RS05705 930f780a1141df6a089b73b9c63125e9 635 SUPERFAMILY SSF55804 1 145 1.7E-38 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CVS42_RS05705 930f780a1141df6a089b73b9c63125e9 635 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 166 255 1.4E-16 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CVS42_RS05705 930f780a1141df6a089b73b9c63125e9 635 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 132 1.9E-40 T 29-03-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 CVS42_RS05705 930f780a1141df6a089b73b9c63125e9 635 SUPERFAMILY SSF52794 163 259 1.46E-34 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CVS42_RS05705 930f780a1141df6a089b73b9c63125e9 635 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 271 616 1.4E-84 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CVS42_RS05705 930f780a1141df6a089b73b9c63125e9 635 Gene3D G3DSA:3.40.50.2300 162 258 2.2E-36 T 29-03-2018 CVS42_RS05705 930f780a1141df6a089b73b9c63125e9 635 Pfam PF02378 Phosphotransferase system, EIIC 288 564 5.3E-17 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CVS42_RS05705 930f780a1141df6a089b73b9c63125e9 635 Gene3D G3DSA:3.40.930.10 1 149 6.0E-39 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CVS42_RS05705 930f780a1141df6a089b73b9c63125e9 635 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 9.9E-37 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CVS42_RS05705 930f780a1141df6a089b73b9c63125e9 635 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 164 247 4.2E-30 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CVS42_RS15305 e4770922d7550cbca2f576e39f65e79d 208 Pfam PF01420 Type I restriction modification DNA specificity domain 20 194 6.4E-7 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CVS42_RS15305 e4770922d7550cbca2f576e39f65e79d 208 Gene3D G3DSA:3.90.220.20 1 193 1.4E-23 T 29-03-2018 CVS42_RS15305 e4770922d7550cbca2f576e39f65e79d 208 SUPERFAMILY SSF116734 8 207 1.39E-32 T 29-03-2018 CVS42_RS12660 97c4d485d4d37ed7d307449b85e02fde 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 191 1.4E-59 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CVS42_RS12660 97c4d485d4d37ed7d307449b85e02fde 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.148 T 29-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CVS42_RS12660 97c4d485d4d37ed7d307449b85e02fde 193 PIRSF PIRSF006102 1 193 1.1E-61 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CVS42_RS12660 97c4d485d4d37ed7d307449b85e02fde 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.7E-88 T 29-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CVS42_RS10510 6dffd913671147416c44d70098d6a2d6 421 Pfam PF01266 FAD dependent oxidoreductase 3 402 1.2E-74 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CVS42_RS10510 6dffd913671147416c44d70098d6a2d6 421 SUPERFAMILY SSF51905 1 54 1.29E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS10510 6dffd913671147416c44d70098d6a2d6 421 SUPERFAMILY SSF51905 107 274 1.29E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS10510 6dffd913671147416c44d70098d6a2d6 421 SUPERFAMILY SSF51905 364 420 1.29E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS10510 6dffd913671147416c44d70098d6a2d6 421 Gene3D G3DSA:3.50.50.60 2 421 6.8E-47 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS10510 6dffd913671147416c44d70098d6a2d6 421 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 415 48.005 T 29-03-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 CVS42_RS10510 6dffd913671147416c44d70098d6a2d6 421 SUPERFAMILY SSF54373 274 364 1.28E-18 T 29-03-2018 CVS42_RS15470 5bae4d0adb07d534af65ec8556b56f8f 238 SUPERFAMILY SSF55681 12 230 1.66E-44 T 29-03-2018 CVS42_RS15470 5bae4d0adb07d534af65ec8556b56f8f 238 Gene3D G3DSA:3.30.930.10 10 235 1.1E-33 T 29-03-2018 CVS42_RS15470 5bae4d0adb07d534af65ec8556b56f8f 238 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 166 1.7E-5 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CVS42_RS12230 df26f7fabcef80338aaafbb949f7fc81 471 SUPERFAMILY SSF51971 145 400 4.77E-68 T 29-03-2018 CVS42_RS12230 df26f7fabcef80338aaafbb949f7fc81 471 Gene3D G3DSA:3.40.50.720 147 242 1.2E-18 T 29-03-2018 CVS42_RS12230 df26f7fabcef80338aaafbb949f7fc81 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 458 1.1E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS12230 df26f7fabcef80338aaafbb949f7fc81 471 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 1.7E-37 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CVS42_RS12230 df26f7fabcef80338aaafbb949f7fc81 471 SUPERFAMILY SSF46548 6 157 3.87E-40 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CVS42_RS12230 df26f7fabcef80338aaafbb949f7fc81 471 Gene3D G3DSA:3.50.50.60 313 389 3.2E-16 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS12230 df26f7fabcef80338aaafbb949f7fc81 471 Gene3D G3DSA:3.50.50.60 243 312 5.0E-19 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS12230 df26f7fabcef80338aaafbb949f7fc81 471 Gene3D G3DSA:1.10.1060.10 2 146 7.5E-41 T 29-03-2018 CVS42_RS12230 df26f7fabcef80338aaafbb949f7fc81 471 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 471 1.9E-248 T 29-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CVS42_RS12230 df26f7fabcef80338aaafbb949f7fc81 471 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 2.4E-35 T 29-03-2018 CVS42_RS12230 df26f7fabcef80338aaafbb949f7fc81 471 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 2.4E-35 T 29-03-2018 CVS42_RS12230 df26f7fabcef80338aaafbb949f7fc81 471 PRINTS PR00419 Adrenodoxin reductase family signature 323 336 2.4E-35 T 29-03-2018 CVS42_RS12230 df26f7fabcef80338aaafbb949f7fc81 471 PRINTS PR00419 Adrenodoxin reductase family signature 289 303 2.4E-35 T 29-03-2018 CVS42_RS12230 df26f7fabcef80338aaafbb949f7fc81 471 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 2.4E-35 T 29-03-2018 CVS42_RS12230 df26f7fabcef80338aaafbb949f7fc81 471 Gene3D G3DSA:3.40.50.720 390 471 9.4E-8 T 29-03-2018 CVS42_RS08515 4ebe14736acf0a3bd4ddd083057ce4c2 578 Gene3D G3DSA:1.20.1560.10 1 325 1.4E-55 T 29-03-2018 CVS42_RS08515 4ebe14736acf0a3bd4ddd083057ce4c2 578 Pfam PF00664 ABC transporter transmembrane region 20 291 2.4E-37 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CVS42_RS08515 4ebe14736acf0a3bd4ddd083057ce4c2 578 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS08515 4ebe14736acf0a3bd4ddd083057ce4c2 578 SMART SM00382 360 544 3.6E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS08515 4ebe14736acf0a3bd4ddd083057ce4c2 578 SUPERFAMILY SSF52540 336 568 1.74E-77 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS08515 4ebe14736acf0a3bd4ddd083057ce4c2 578 Gene3D G3DSA:3.40.50.300 326 574 7.5E-68 T 29-03-2018 CVS42_RS08515 4ebe14736acf0a3bd4ddd083057ce4c2 578 Pfam PF00005 ABC transporter 351 499 2.7E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS08515 4ebe14736acf0a3bd4ddd083057ce4c2 578 SUPERFAMILY SSF90123 6 317 1.7E-71 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CVS42_RS04885 4b8e2784820a0a8549339a260f09c86d 306 Pfam PF07859 alpha/beta hydrolase fold 78 283 4.9E-64 T 29-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CVS42_RS04885 4b8e2784820a0a8549339a260f09c86d 306 SUPERFAMILY SSF53474 58 305 4.41E-64 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS04885 4b8e2784820a0a8549339a260f09c86d 306 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 150 162 - T 29-03-2018 IPR033140 Lipase, GDXG, putative serine active site CVS42_RS04885 4b8e2784820a0a8549339a260f09c86d 306 Gene3D G3DSA:3.40.50.1820 1 306 4.3E-52 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS09340 4beb06cdd2d9e4e7137341f53bc81908 772 Gene3D G3DSA:3.30.365.10 441 597 2.2E-35 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CVS42_RS09340 4beb06cdd2d9e4e7137341f53bc81908 772 SUPERFAMILY SSF54665 2 152 4.06E-39 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CVS42_RS09340 4beb06cdd2d9e4e7137341f53bc81908 772 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 17 133 6.6E-29 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CVS42_RS09340 4beb06cdd2d9e4e7137341f53bc81908 772 Gene3D G3DSA:3.90.1170.50 2 133 2.6E-34 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CVS42_RS09340 4beb06cdd2d9e4e7137341f53bc81908 772 SUPERFAMILY SSF56003 125 753 2.62E-175 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CVS42_RS09340 4beb06cdd2d9e4e7137341f53bc81908 772 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 154 696 4.8E-154 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CVS42_RS09340 4beb06cdd2d9e4e7137341f53bc81908 772 Gene3D G3DSA:3.30.365.10 598 760 2.2E-41 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CVS42_RS09340 4beb06cdd2d9e4e7137341f53bc81908 772 Gene3D G3DSA:3.30.365.10 162 269 5.7E-27 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CVS42_RS09340 4beb06cdd2d9e4e7137341f53bc81908 772 SMART SM01008 17 133 1.3E-41 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CVS42_RS09340 4beb06cdd2d9e4e7137341f53bc81908 772 Gene3D G3DSA:3.30.365.10 270 427 4.2E-37 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CVS42_RS20700 2c55f60c8f29aaddf0e31876f86248f0 345 Gene3D G3DSA:3.30.43.10 1 71 1.6E-14 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CVS42_RS20700 2c55f60c8f29aaddf0e31876f86248f0 345 SUPERFAMILY SSF56176 9 199 2.99E-45 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CVS42_RS20700 2c55f60c8f29aaddf0e31876f86248f0 345 Gene3D G3DSA:3.30.465.10 73 221 1.5E-49 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CVS42_RS20700 2c55f60c8f29aaddf0e31876f86248f0 345 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 11 333 1.1E-87 T 29-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS20700 2c55f60c8f29aaddf0e31876f86248f0 345 Gene3D G3DSA:3.90.78.10 224 337 2.1E-40 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS20700 2c55f60c8f29aaddf0e31876f86248f0 345 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 345 87.069 T 29-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS20700 2c55f60c8f29aaddf0e31876f86248f0 345 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 209 331 4.7E-33 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS20700 2c55f60c8f29aaddf0e31876f86248f0 345 SUPERFAMILY SSF56194 206 343 3.4E-50 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS20700 2c55f60c8f29aaddf0e31876f86248f0 345 Pfam PF01565 FAD binding domain 25 153 3.5E-20 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CVS42_RS17655 8ffd7c5d347f3d1a1992f303b7525b9c 450 PIRSF PIRSF006603 2 444 7.3E-119 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS17655 8ffd7c5d347f3d1a1992f303b7525b9c 450 Pfam PF01554 MatE 22 181 1.7E-27 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS17655 8ffd7c5d347f3d1a1992f303b7525b9c 450 Pfam PF01554 MatE 247 407 2.8E-23 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS17655 8ffd7c5d347f3d1a1992f303b7525b9c 450 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 410 1.1E-57 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS19145 a7831a2704a21788a616199b2c94ca78 121 Pfam PF14272 Glycine-rich SFCGS 4 117 6.9E-62 T 29-03-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 CVS42_RS19145 a7831a2704a21788a616199b2c94ca78 121 TIGRFAM TIGR03577 EF_0830: conserved hypothetical protein EF_0830/AHA_3911 4 118 2.0E-67 T 29-03-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 CVS42_RS19145 a7831a2704a21788a616199b2c94ca78 121 Gene3D G3DSA:3.40.1400.10 18 120 4.6E-4 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CVS42_RS04255 310a703f0b1babd321b7f6748e9415eb 536 Pfam PF12792 CSS motif domain associated with EAL 69 257 6.6E-31 T 29-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CVS42_RS04255 310a703f0b1babd321b7f6748e9415eb 536 SMART SM00052 283 529 7.9E-96 T 29-03-2018 IPR001633 EAL domain CVS42_RS04255 310a703f0b1babd321b7f6748e9415eb 536 Gene3D G3DSA:3.20.20.450 283 535 6.7E-78 T 29-03-2018 IPR001633 EAL domain CVS42_RS04255 310a703f0b1babd321b7f6748e9415eb 536 SUPERFAMILY SSF141868 289 534 3.66E-74 T 29-03-2018 IPR001633 EAL domain CVS42_RS04255 310a703f0b1babd321b7f6748e9415eb 536 Pfam PF00563 EAL domain 289 524 3.7E-63 T 29-03-2018 IPR001633 EAL domain CVS42_RS02230 db871369229cbbff44d3551872deb6be 94 SUPERFAMILY SSF46565 2 71 1.31E-23 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS02230 db871369229cbbff44d3551872deb6be 94 PRINTS PR00625 DnaJ domain signature 45 65 1.5E-16 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS02230 db871369229cbbff44d3551872deb6be 94 PRINTS PR00625 DnaJ domain signature 23 38 1.5E-16 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS02230 db871369229cbbff44d3551872deb6be 94 PRINTS PR00625 DnaJ domain signature 5 23 1.5E-16 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS02230 db871369229cbbff44d3551872deb6be 94 Pfam PF00226 DnaJ domain 3 69 1.2E-20 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS02230 db871369229cbbff44d3551872deb6be 94 Gene3D G3DSA:1.10.287.110 1 86 1.4E-23 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS02230 db871369229cbbff44d3551872deb6be 94 SMART SM00271 2 65 7.8E-24 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS15140 fc57106d0198c5f347074d21744f3e05 316 SUPERFAMILY SSF143422 16 81 5.36E-19 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CVS42_RS15140 fc57106d0198c5f347074d21744f3e05 316 SUPERFAMILY SSF143422 134 192 5.36E-19 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CVS42_RS15140 fc57106d0198c5f347074d21744f3e05 316 SMART SM01321 12 187 0.0011 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CVS42_RS15140 fc57106d0198c5f347074d21744f3e05 316 Gene3D G3DSA:3.30.70.1290 3 194 1.0E-26 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CVS42_RS11910 90e97b20312fae074e98b4889a0146ef 318 SUPERFAMILY SSF53850 91 296 2.41E-28 T 29-03-2018 CVS42_RS11910 90e97b20312fae074e98b4889a0146ef 318 Gene3D G3DSA:1.10.10.10 1 83 1.3E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS11910 90e97b20312fae074e98b4889a0146ef 318 Pfam PF03466 LysR substrate binding domain 91 270 9.0E-29 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS11910 90e97b20312fae074e98b4889a0146ef 318 Gene3D G3DSA:3.40.190.10 179 257 1.4E-9 T 29-03-2018 CVS42_RS11910 90e97b20312fae074e98b4889a0146ef 318 Gene3D G3DSA:3.40.190.10 90 178 2.1E-19 T 29-03-2018 CVS42_RS11910 90e97b20312fae074e98b4889a0146ef 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 9.6E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS11910 90e97b20312fae074e98b4889a0146ef 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS11910 90e97b20312fae074e98b4889a0146ef 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS11910 90e97b20312fae074e98b4889a0146ef 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS11910 90e97b20312fae074e98b4889a0146ef 318 SUPERFAMILY SSF46785 1 113 4.45E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS14245 c0ca01abd8bc1cebc1cb0b0a35edcc7a 379 SUPERFAMILY SSF111369 48 239 1.57E-12 T 29-03-2018 CVS42_RS14245 c0ca01abd8bc1cebc1cb0b0a35edcc7a 379 Gene3D G3DSA:2.40.50.100 31 74 5.0E-6 T 29-03-2018 CVS42_RS14245 c0ca01abd8bc1cebc1cb0b0a35edcc7a 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 281 8.0E-16 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CVS42_RS14245 c0ca01abd8bc1cebc1cb0b0a35edcc7a 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 358 3.7E-35 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CVS42_RS14245 c0ca01abd8bc1cebc1cb0b0a35edcc7a 379 Gene3D G3DSA:2.40.50.100 75 208 3.0E-13 T 29-03-2018 CVS42_RS09430 e8171eb953ebd64a0d38b7f9e03308d3 230 Pfam PF00814 Glycoprotease family 28 151 2.8E-34 T 29-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CVS42_RS09430 e8171eb953ebd64a0d38b7f9e03308d3 230 Gene3D G3DSA:3.30.420.40 141 230 0.0018 T 29-03-2018 CVS42_RS09430 e8171eb953ebd64a0d38b7f9e03308d3 230 Gene3D G3DSA:3.30.420.40 1 136 1.7E-41 T 29-03-2018 CVS42_RS09430 e8171eb953ebd64a0d38b7f9e03308d3 230 SUPERFAMILY SSF53067 108 216 1.09E-25 T 29-03-2018 CVS42_RS09430 e8171eb953ebd64a0d38b7f9e03308d3 230 SUPERFAMILY SSF53067 2 105 9.93E-32 T 29-03-2018 CVS42_RS09430 e8171eb953ebd64a0d38b7f9e03308d3 230 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 218 7.3E-66 T 29-03-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 CVS42_RS21300 e977658055427f42af0e56a79313ab24 202 Gene3D G3DSA:3.40.30.10 18 201 8.0E-41 T 29-03-2018 CVS42_RS21300 e977658055427f42af0e56a79313ab24 202 PIRSF PIRSF001488 1 201 6.7E-61 T 29-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CVS42_RS21300 e977658055427f42af0e56a79313ab24 202 SUPERFAMILY SSF52833 21 199 9.81E-43 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS21300 e977658055427f42af0e56a79313ab24 202 ProSitePatterns PS00194 Thioredoxin family active site. 42 60 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CVS42_RS21300 e977658055427f42af0e56a79313ab24 202 Pfam PF01323 DSBA-like thioredoxin domain 42 179 4.8E-22 T 29-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 CVS42_RS21045 127cc55b1567b2c529f78c964e5b9c04 167 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 6 159 30.183 T 29-03-2018 IPR033747 Class I PurE CVS42_RS21045 127cc55b1567b2c529f78c964e5b9c04 167 SUPERFAMILY SSF52255 4 164 6.28E-60 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CVS42_RS21045 127cc55b1567b2c529f78c964e5b9c04 167 Pfam PF00731 AIR carboxylase 6 153 1.1E-57 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CVS42_RS21045 127cc55b1567b2c529f78c964e5b9c04 167 SMART SM01001 4 155 7.9E-89 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CVS42_RS21045 127cc55b1567b2c529f78c964e5b9c04 167 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 6 162 9.5E-59 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CVS42_RS21045 127cc55b1567b2c529f78c964e5b9c04 167 PIRSF PIRSF001338 1 166 3.1E-61 T 29-03-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 CVS42_RS21045 127cc55b1567b2c529f78c964e5b9c04 167 Gene3D G3DSA:3.40.50.7700 1 164 1.5E-61 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CVS42_RS17900 3d9c8eb9f5e65cf6328e39926babfc6a 145 Pfam PF09335 SNARE associated Golgi protein 29 140 7.4E-8 T 29-03-2018 IPR032816 SNARE associated Golgi protein CVS42_RS17900 3d9c8eb9f5e65cf6328e39926babfc6a 145 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 12 139 6.0E-6 T 29-03-2018 IPR020143 Uncharacterised protein family, RP436 CVS42_RS04535 d08252b61778cdba3749e750918f160b 226 Pfam PF00313 'Cold-shock' DNA-binding domain 4 75 1.6E-8 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CVS42_RS04535 d08252b61778cdba3749e750918f160b 226 SMART SM00357 4 78 2.8E-4 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CVS42_RS04535 d08252b61778cdba3749e750918f160b 226 Gene3D G3DSA:2.40.50.140 1 79 2.6E-16 T 29-03-2018 CVS42_RS04535 d08252b61778cdba3749e750918f160b 226 SUPERFAMILY SSF50249 1 79 5.88E-12 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS04535 d08252b61778cdba3749e750918f160b 226 Pfam PF05901 Excalibur calcium-binding domain 186 220 1.1E-10 T 29-03-2018 IPR008613 Excalibur calcium-binding domain CVS42_RS20295 12b172ba5da7537a4f61a1c524bfe041 569 SUPERFAMILY SSF160246 2 146 5.1E-39 T 29-03-2018 CVS42_RS20295 12b172ba5da7537a4f61a1c524bfe041 569 SUPERFAMILY SSF52540 176 563 1.88E-93 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS20295 12b172ba5da7537a4f61a1c524bfe041 569 SMART SM00382 317 438 7.3E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS20295 12b172ba5da7537a4f61a1c524bfe041 569 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 384 398 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CVS42_RS20295 12b172ba5da7537a4f61a1c524bfe041 569 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 43 149 2.7E-24 T 29-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 CVS42_RS20295 12b172ba5da7537a4f61a1c524bfe041 569 Gene3D G3DSA:3.40.50.300 290 568 2.9E-58 T 29-03-2018 CVS42_RS20295 12b172ba5da7537a4f61a1c524bfe041 569 Pfam PF00437 Type II/IV secretion system protein 195 456 1.9E-77 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CVS42_RS20295 12b172ba5da7537a4f61a1c524bfe041 569 Gene3D G3DSA:3.30.450.90 148 289 2.7E-42 T 29-03-2018 CVS42_RS10640 dc465df38512649bbb733b9036509073 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 1.2E-31 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CVS42_RS10640 dc465df38512649bbb733b9036509073 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 112 2.4E-34 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CVS42_RS10640 dc465df38512649bbb733b9036509073 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 29-03-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CVS42_RS10640 dc465df38512649bbb733b9036509073 113 PIRSF PIRSF004761 1 113 6.6E-36 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CVS42_RS10640 dc465df38512649bbb733b9036509073 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 24.299 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CVS42_RS03020 debae1fbd91d3d7606f0247b910f76d3 302 Gene3D G3DSA:3.40.50.620 3 300 5.4E-42 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS03020 debae1fbd91d3d7606f0247b910f76d3 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 3.4E-65 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CVS42_RS03020 debae1fbd91d3d7606f0247b910f76d3 302 SUPERFAMILY SSF52402 6 210 1.56E-75 T 29-03-2018 CVS42_RS03020 debae1fbd91d3d7606f0247b910f76d3 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.033 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CVS42_RS03020 debae1fbd91d3d7606f0247b910f76d3 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 9.2E-162 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CVS42_RS03020 debae1fbd91d3d7606f0247b910f76d3 302 PIRSF PIRSF002936 1 302 3.6E-156 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CVS42_RS18300 0fb1de934f883039bdea04277aaaf668 344 SUPERFAMILY SSF50331 239 341 4.42E-6 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CVS42_RS18300 0fb1de934f883039bdea04277aaaf668 344 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS18300 0fb1de934f883039bdea04277aaaf668 344 SUPERFAMILY SSF52540 4 246 7.05E-80 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS18300 0fb1de934f883039bdea04277aaaf668 344 Pfam PF00005 ABC transporter 19 163 2.8E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS18300 0fb1de934f883039bdea04277aaaf668 344 SMART SM00382 28 221 1.4E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS18300 0fb1de934f883039bdea04277aaaf668 344 Gene3D G3DSA:3.40.50.300 1 251 7.9E-70 T 29-03-2018 CVS42_RS06510 b48dc1e83c7a93509e87a128c954142d 374 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 173 316 8.8E-12 T 29-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CVS42_RS06510 b48dc1e83c7a93509e87a128c954142d 374 SUPERFAMILY SSF51735 172 318 5.01E-16 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS06510 b48dc1e83c7a93509e87a128c954142d 374 Gene3D G3DSA:3.40.50.720 168 320 8.3E-12 T 29-03-2018 CVS42_RS06510 b48dc1e83c7a93509e87a128c954142d 374 SMART SM00997 159 321 4.7E-28 T 29-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CVS42_RS05220 f89787a34f4c4609109ddbb299dcbec9 66 Pfam PF10725 Protein of unknown function (DUF2517) 2 61 6.8E-35 T 29-03-2018 IPR019663 Uncharacterised protein YbfA CVS42_RS00955 8daac6a107bb0b4b67e1078efad06ad3 169 Pfam PF01202 Shikimate kinase 13 125 7.7E-11 T 29-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CVS42_RS00955 8daac6a107bb0b4b67e1078efad06ad3 169 SUPERFAMILY SSF52540 3 167 2.08E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00955 8daac6a107bb0b4b67e1078efad06ad3 169 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 164 1.3E-64 T 29-03-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 CVS42_RS00955 8daac6a107bb0b4b67e1078efad06ad3 169 Gene3D G3DSA:3.40.50.300 2 169 1.5E-31 T 29-03-2018 CVS42_RS15930 610e570d770c9626bbcd1a19f71e1f21 184 Gene3D G3DSA:3.40.1740.10 120 175 3.3E-10 T 29-03-2018 CVS42_RS15930 610e570d770c9626bbcd1a19f71e1f21 184 SUPERFAMILY SSF143456 2 183 2.88E-64 T 29-03-2018 CVS42_RS15930 610e570d770c9626bbcd1a19f71e1f21 184 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 2 184 37.946 T 29-03-2018 IPR003774 Protein of unknown function UPF0301 CVS42_RS15930 610e570d770c9626bbcd1a19f71e1f21 184 Pfam PF02622 Uncharacterized ACR, COG1678 13 171 2.9E-50 T 29-03-2018 IPR003774 Protein of unknown function UPF0301 CVS42_RS15930 610e570d770c9626bbcd1a19f71e1f21 184 Gene3D G3DSA:3.30.70.1300 43 119 7.1E-28 T 29-03-2018 CVS42_RS17505 ba1197df06dd56ef7a661d654ce4f912 393 Gene3D G3DSA:3.40.630.10 3 285 2.3E-50 T 29-03-2018 CVS42_RS17505 ba1197df06dd56ef7a661d654ce4f912 393 Pfam PF01546 Peptidase family M20/M25/M40 75 388 5.8E-21 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CVS42_RS17505 ba1197df06dd56ef7a661d654ce4f912 393 Pfam PF07687 Peptidase dimerisation domain 190 282 1.3E-11 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CVS42_RS17505 ba1197df06dd56ef7a661d654ce4f912 393 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 19 381 1.1E-79 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CVS42_RS17505 ba1197df06dd56ef7a661d654ce4f912 393 PIRSF PIRSF005962 3 392 3.3E-106 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CVS42_RS17505 ba1197df06dd56ef7a661d654ce4f912 393 SUPERFAMILY SSF53187 13 201 2.9E-60 T 29-03-2018 CVS42_RS17505 ba1197df06dd56ef7a661d654ce4f912 393 SUPERFAMILY SSF53187 300 389 2.9E-60 T 29-03-2018 CVS42_RS17505 ba1197df06dd56ef7a661d654ce4f912 393 SUPERFAMILY SSF55031 190 283 4.06E-21 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CVS42_RS14820 65714a1926095c71ebe762208c2ec38c 589 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 554 5.7E-188 T 29-03-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 CVS42_RS14820 65714a1926095c71ebe762208c2ec38c 589 Pfam PF00005 ABC transporter 369 512 4.2E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS14820 65714a1926095c71ebe762208c2ec38c 589 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS14820 65714a1926095c71ebe762208c2ec38c 589 Pfam PF00664 ABC transporter transmembrane region 25 292 2.9E-41 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CVS42_RS14820 65714a1926095c71ebe762208c2ec38c 589 Gene3D G3DSA:1.20.1560.10 2 336 3.6E-43 T 29-03-2018 CVS42_RS14820 65714a1926095c71ebe762208c2ec38c 589 SMART SM00382 375 565 3.3E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS14820 65714a1926095c71ebe762208c2ec38c 589 Gene3D G3DSA:3.40.50.300 337 586 7.7E-59 T 29-03-2018 CVS42_RS14820 65714a1926095c71ebe762208c2ec38c 589 SUPERFAMILY SSF90123 3 334 4.71E-55 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CVS42_RS14820 65714a1926095c71ebe762208c2ec38c 589 SUPERFAMILY SSF52540 361 580 2.52E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11650 d6c9a571ede6e0a7f30ad53da91ebf55 130 Gene3D G3DSA:1.20.120.550 1 130 3.2E-18 T 29-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain CVS42_RS11650 d6c9a571ede6e0a7f30ad53da91ebf55 130 SUPERFAMILY SSF161084 2 124 7.46E-25 T 29-03-2018 CVS42_RS11650 d6c9a571ede6e0a7f30ad53da91ebf55 130 Pfam PF01124 MAPEG family 6 123 2.6E-26 T 29-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CVS42_RS07765 80a0ffca92282216e59d9e6f3d100947 415 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 140 155 - T 29-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CVS42_RS07765 80a0ffca92282216e59d9e6f3d100947 415 Pfam PF02875 Mur ligase family, glutamate ligase domain 282 333 7.6E-6 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CVS42_RS07765 80a0ffca92282216e59d9e6f3d100947 415 SUPERFAMILY SSF53244 282 412 2.35E-29 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CVS42_RS07765 80a0ffca92282216e59d9e6f3d100947 415 TIGRFAM TIGR01499 folC: bifunctional protein FolC 28 410 2.3E-99 T 29-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CVS42_RS07765 80a0ffca92282216e59d9e6f3d100947 415 SUPERFAMILY SSF53623 7 280 6.02E-87 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS07765 80a0ffca92282216e59d9e6f3d100947 415 Gene3D G3DSA:3.90.190.20 287 415 1.0E-27 T 29-03-2018 CVS42_RS07765 80a0ffca92282216e59d9e6f3d100947 415 Gene3D G3DSA:3.40.1190.10 2 282 6.0E-74 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS07765 80a0ffca92282216e59d9e6f3d100947 415 Pfam PF08245 Mur ligase middle domain 50 186 3.3E-6 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS07765 80a0ffca92282216e59d9e6f3d100947 415 PIRSF PIRSF001563 1 415 7.6E-105 T 29-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CVS42_RS05015 80b50cfcb090cf7468080a992e2a9cac 284 SUPERFAMILY SSF51569 3 278 1.28E-104 T 29-03-2018 CVS42_RS05015 80b50cfcb090cf7468080a992e2a9cac 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 4.3E-119 T 29-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CVS42_RS05015 80b50cfcb090cf7468080a992e2a9cac 284 Gene3D G3DSA:3.20.20.70 1 274 1.3E-68 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS05015 80b50cfcb090cf7468080a992e2a9cac 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.543 T 29-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CVS42_RS05015 80b50cfcb090cf7468080a992e2a9cac 284 Pfam PF00793 DAHP synthetase I family 9 274 5.0E-69 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CVS42_RS20365 b76a1d83e6d3f32e56a6cb161f77ba3a 314 TIGRFAM TIGR01227 hutG: formimidoylglutamase 12 311 1.2E-97 T 29-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 CVS42_RS20365 b76a1d83e6d3f32e56a6cb161f77ba3a 314 PIRSF PIRSF036979 27 313 6.1E-23 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 CVS42_RS20365 b76a1d83e6d3f32e56a6cb161f77ba3a 314 SUPERFAMILY SSF52768 11 310 5.04E-79 T 29-03-2018 CVS42_RS20365 b76a1d83e6d3f32e56a6cb161f77ba3a 314 Pfam PF00491 Arginase family 43 310 6.0E-60 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 CVS42_RS20365 b76a1d83e6d3f32e56a6cb161f77ba3a 314 Gene3D G3DSA:3.40.800.10 2 314 1.8E-81 T 29-03-2018 CVS42_RS20365 b76a1d83e6d3f32e56a6cb161f77ba3a 314 Hamap MF_00737 Formimidoylglutamase [hutG]. 7 314 42.095 T 29-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 CVS42_RS20365 b76a1d83e6d3f32e56a6cb161f77ba3a 314 PRINTS PR00116 Arginase signature 123 138 3.3E-5 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 CVS42_RS20365 b76a1d83e6d3f32e56a6cb161f77ba3a 314 PRINTS PR00116 Arginase signature 240 269 3.3E-5 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 CVS42_RS20365 b76a1d83e6d3f32e56a6cb161f77ba3a 314 PRINTS PR00116 Arginase signature 275 289 3.3E-5 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 CVS42_RS03970 7443815cae0be13b52b657d38c543c48 328 SUPERFAMILY SSF53474 22 317 3.3E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS03970 7443815cae0be13b52b657d38c543c48 328 Pfam PF00561 alpha/beta hydrolase fold 60 300 6.8E-20 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS03970 7443815cae0be13b52b657d38c543c48 328 Gene3D G3DSA:3.40.50.1820 33 323 9.4E-29 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS03970 7443815cae0be13b52b657d38c543c48 328 PIRSF PIRSF005211 1 328 8.1E-100 T 29-03-2018 IPR012020 AB hydrolase 4 family CVS42_RS11915 02f054e44d3ef2ad039d5e2abf4007d7 291 Gene3D G3DSA:3.40.190.10 176 262 9.2E-16 T 29-03-2018 CVS42_RS11915 02f054e44d3ef2ad039d5e2abf4007d7 291 Gene3D G3DSA:1.10.10.10 1 90 5.6E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS11915 02f054e44d3ef2ad039d5e2abf4007d7 291 Pfam PF03466 LysR substrate binding domain 87 288 1.2E-43 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS11915 02f054e44d3ef2ad039d5e2abf4007d7 291 Gene3D G3DSA:3.40.190.10 91 175 1.4E-24 T 29-03-2018 CVS42_RS11915 02f054e44d3ef2ad039d5e2abf4007d7 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.4E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS11915 02f054e44d3ef2ad039d5e2abf4007d7 291 SUPERFAMILY SSF53850 90 288 2.17E-42 T 29-03-2018 CVS42_RS11915 02f054e44d3ef2ad039d5e2abf4007d7 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.5E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS11915 02f054e44d3ef2ad039d5e2abf4007d7 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.5E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS11915 02f054e44d3ef2ad039d5e2abf4007d7 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.5E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS11915 02f054e44d3ef2ad039d5e2abf4007d7 291 SUPERFAMILY SSF46785 1 110 1.58E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS04250 c55324bfe8c489637b478be423441c7a 301 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 221 4.9E-25 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CVS42_RS04250 c55324bfe8c489637b478be423441c7a 301 Gene3D G3DSA:3.40.50.720 1 300 2.0E-42 T 29-03-2018 CVS42_RS04250 c55324bfe8c489637b478be423441c7a 301 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 1.7E-108 T 29-03-2018 IPR010099 Epimerase family protein SDR39U1 CVS42_RS04250 c55324bfe8c489637b478be423441c7a 301 Pfam PF08338 Domain of unknown function (DUF1731) 250 296 8.0E-20 T 29-03-2018 IPR013549 Domain of unknown function DUF1731 CVS42_RS04250 c55324bfe8c489637b478be423441c7a 301 SUPERFAMILY SSF51735 1 294 7.66E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS20265 e19d80ff450cae8fe832993545d19629 186 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.2E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS20265 e19d80ff450cae8fe832993545d19629 186 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS20265 e19d80ff450cae8fe832993545d19629 186 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 6.4E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 TIGRFAM TIGR01273 speA: arginine decarboxylase 4 631 1.2E-243 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 2 632 40.473 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 PIRSF PIRSF001336 1 633 2.7E-237 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 Gene3D G3DSA:2.40.37.10 397 579 2.5E-59 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 Gene3D G3DSA:2.40.37.10 1 79 1.6E-14 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 Gene3D G3DSA:3.20.20.10 80 344 5.3E-39 T 29-03-2018 IPR029066 PLP-binding barrel CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 541 562 1.9E-68 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 488 513 1.9E-68 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 147 162 1.9E-68 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 197 219 1.9E-68 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 90 104 1.9E-68 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 324 341 1.9E-68 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 66 81 1.9E-68 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 463 484 1.9E-68 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01180 Arginine decarboxylase signature 173 194 1.9E-68 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 SUPERFAMILY SSF51419 66 346 9.49E-65 T 29-03-2018 IPR029066 PLP-binding barrel CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 91 344 1.9E-49 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 278 291 - T 29-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 98 116 1.4E-13 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 240 253 1.4E-13 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 334 353 1.4E-13 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CVS42_RS06535 5d99b710777f8332fd3beee3f2b3954a 633 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 541 554 1.4E-13 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CVS42_RS02935 441636e6a185f2f5b6e293109ccca925 158 SUPERFAMILY SSF46785 2 92 8.67E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02935 441636e6a185f2f5b6e293109ccca925 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 3.2E-18 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CVS42_RS02935 441636e6a185f2f5b6e293109ccca925 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 3.2E-18 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CVS42_RS02935 441636e6a185f2f5b6e293109ccca925 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 3.2E-18 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CVS42_RS02935 441636e6a185f2f5b6e293109ccca925 158 Pfam PF01037 Lrp/AsnC ligand binding domain 70 144 1.5E-25 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CVS42_RS02935 441636e6a185f2f5b6e293109ccca925 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CVS42_RS02935 441636e6a185f2f5b6e293109ccca925 158 SMART SM00344 4 114 3.6E-40 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CVS42_RS02935 441636e6a185f2f5b6e293109ccca925 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 5.3E-21 T 29-03-2018 CVS42_RS02935 441636e6a185f2f5b6e293109ccca925 158 Gene3D G3DSA:1.10.10.10 4 54 7.4E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02935 441636e6a185f2f5b6e293109ccca925 158 SUPERFAMILY SSF54909 65 154 6.17E-23 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CVS42_RS02935 441636e6a185f2f5b6e293109ccca925 158 Gene3D G3DSA:3.30.70.920 56 155 3.3E-30 T 29-03-2018 CVS42_RS02795 ee59807204eeb30563ee4cee2bf90a4b 669 SMART SM00283 407 668 2.5E-56 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS02795 ee59807204eeb30563ee4cee2bf90a4b 669 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 471 631 2.1E-42 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS02795 ee59807204eeb30563ee4cee2bf90a4b 669 SMART SM00304 338 392 6.1E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS02795 ee59807204eeb30563ee4cee2bf90a4b 669 Pfam PF00672 HAMP domain 338 388 3.8E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS02795 ee59807204eeb30563ee4cee2bf90a4b 669 Gene3D G3DSA:1.10.287.950 436 639 5.2E-45 T 29-03-2018 CVS42_RS02795 ee59807204eeb30563ee4cee2bf90a4b 669 Gene3D G3DSA:1.10.287.950 240 435 0.043 T 29-03-2018 CVS42_RS02795 ee59807204eeb30563ee4cee2bf90a4b 669 SUPERFAMILY SSF58104 361 669 4.45E-65 T 29-03-2018 CVS42_RS01425 6e8e43061946dbdfaa21031511d62f08 282 Gene3D G3DSA:3.30.450.80 5 174 5.1E-4 T 29-03-2018 CVS42_RS01425 6e8e43061946dbdfaa21031511d62f08 282 Pfam PF00196 Bacterial regulatory proteins, luxR family 203 257 4.2E-15 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS01425 6e8e43061946dbdfaa21031511d62f08 282 SUPERFAMILY SSF46894 193 261 1.43E-16 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS01425 6e8e43061946dbdfaa21031511d62f08 282 ProSitePatterns PS00622 LuxR-type HTH domain signature. 218 245 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS01425 6e8e43061946dbdfaa21031511d62f08 282 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 234 246 1.7E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS01425 6e8e43061946dbdfaa21031511d62f08 282 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 218 234 1.7E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS01425 6e8e43061946dbdfaa21031511d62f08 282 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 204 218 1.7E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS01425 6e8e43061946dbdfaa21031511d62f08 282 SMART SM00421 201 258 1.2E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS01425 6e8e43061946dbdfaa21031511d62f08 282 Gene3D G3DSA:1.10.10.10 177 264 1.9E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS19450 dd6d7cc001df1b11c79610c0e8a5445a 137 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 25 125 2.7E-19 T 29-03-2018 IPR032871 AHH domain-containing protein CVS42_RS05390 e59c57112b26c4d678ec6ff406b7f921 412 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 321 341 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CVS42_RS05390 e59c57112b26c4d678ec6ff406b7f921 412 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 3 397 3.3E-110 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CVS42_RS05390 e59c57112b26c4d678ec6ff406b7f921 412 Pfam PF00860 Permease family 6 371 1.9E-94 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CVS42_RS08060 96d9eac53ed5e078edc7d95fd0794fe8 252 Pfam PF01026 TatD related DNase 2 240 1.1E-35 T 29-03-2018 IPR001130 TatD family GO:0016788 CVS42_RS08060 96d9eac53ed5e078edc7d95fd0794fe8 252 SUPERFAMILY SSF51556 2 239 5.57E-42 T 29-03-2018 IPR032466 Metal-dependent hydrolase CVS42_RS08060 96d9eac53ed5e078edc7d95fd0794fe8 252 PIRSF PIRSF005902 1 244 5.1E-32 T 29-03-2018 IPR001130 TatD family GO:0016788 CVS42_RS08060 96d9eac53ed5e078edc7d95fd0794fe8 252 Gene3D G3DSA:3.20.20.140 1 245 5.9E-43 T 29-03-2018 CVS42_RS20175 c2f97a4cb5d4ea5c109635d3dfeb09b1 239 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 1 239 1.2E-97 T 29-03-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CVS42_RS20175 c2f97a4cb5d4ea5c109635d3dfeb09b1 239 PIRSF PIRSF017818 1 239 6.6E-106 T 29-03-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CVS42_RS20175 c2f97a4cb5d4ea5c109635d3dfeb09b1 239 SUPERFAMILY SSF56784 35 238 8.64E-70 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS20175 c2f97a4cb5d4ea5c109635d3dfeb09b1 239 Gene3D G3DSA:3.40.50.1000 29 239 3.0E-31 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS20175 c2f97a4cb5d4ea5c109635d3dfeb09b1 239 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 37 222 3.9E-35 T 29-03-2018 IPR005519 Acid phosphatase, class B-like CVS42_RS04490 59569bbb03d3195ab736a577edb09816 576 SUPERFAMILY SSF64182 46 464 4.97E-120 T 29-03-2018 CVS42_RS04490 59569bbb03d3195ab736a577edb09816 576 Pfam PF02272 DHHA1 domain 321 451 1.9E-26 T 29-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CVS42_RS04490 59569bbb03d3195ab736a577edb09816 576 Pfam PF01368 DHH family 71 199 1.4E-9 T 29-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CVS42_RS04490 59569bbb03d3195ab736a577edb09816 576 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 21 570 3.7E-156 T 29-03-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CVS42_RS04490 59569bbb03d3195ab736a577edb09816 576 Gene3D G3DSA:3.90.1640.10 50 242 4.3E-22 T 29-03-2018 CVS42_RS00675 65de407c4a9721f8e7293e2959da7c83 329 PIRSF PIRSF005096 2 329 5.1E-101 T 29-03-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CVS42_RS00675 65de407c4a9721f8e7293e2959da7c83 329 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 3 326 2.5E-127 T 29-03-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CVS42_RS00675 65de407c4a9721f8e7293e2959da7c83 329 SUPERFAMILY SSF74650 6 326 3.39E-90 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CVS42_RS00675 65de407c4a9721f8e7293e2959da7c83 329 Pfam PF01263 Aldose 1-epimerase 9 325 2.5E-68 T 29-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CVS42_RS00675 65de407c4a9721f8e7293e2959da7c83 329 Gene3D G3DSA:2.70.98.10 2 328 2.0E-96 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CVS42_RS16485 e0bb628fa95b259432c20f40a6e51119 133 SUPERFAMILY SSF54593 11 127 5.49E-10 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS16485 e0bb628fa95b259432c20f40a6e51119 133 Gene3D G3DSA:3.10.180.10 9 125 6.7E-9 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS04465 e5b1322f09d3684ccf6c954ba363226f 172 SUPERFAMILY SSF52218 1 168 2.0E-48 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS04465 e5b1322f09d3684ccf6c954ba363226f 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CVS42_RS04465 e5b1322f09d3684ccf6c954ba363226f 172 Pfam PF00258 Flavodoxin 5 160 6.8E-25 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CVS42_RS04465 e5b1322f09d3684ccf6c954ba363226f 172 Gene3D G3DSA:3.40.50.360 78 172 8.2E-15 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS04465 e5b1322f09d3684ccf6c954ba363226f 172 Gene3D G3DSA:3.40.50.360 1 77 9.0E-14 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS04465 e5b1322f09d3684ccf6c954ba363226f 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 1.6E-69 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CVS42_RS04465 e5b1322f09d3684ccf6c954ba363226f 172 PIRSF PIRSF038996 1 171 5.1E-58 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CVS42_RS02385 8adb77b25ac51ef510ca76d20a3f08db 350 SMART SM00478 39 190 2.5E-50 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CVS42_RS02385 8adb77b25ac51ef510ca76d20a3f08db 350 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 29-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CVS42_RS02385 8adb77b25ac51ef510ca76d20a3f08db 350 SMART SM00525 191 211 0.0074 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CVS42_RS02385 8adb77b25ac51ef510ca76d20a3f08db 350 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 274 1.5E-115 T 29-03-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 CVS42_RS02385 8adb77b25ac51ef510ca76d20a3f08db 350 SUPERFAMILY SSF55811 220 344 2.47E-24 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CVS42_RS02385 8adb77b25ac51ef510ca76d20a3f08db 350 Pfam PF00633 Helix-hairpin-helix motif 100 127 5.6E-7 T 29-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CVS42_RS02385 8adb77b25ac51ef510ca76d20a3f08db 350 Gene3D G3DSA:1.10.1670.10 118 224 8.7E-36 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CVS42_RS02385 8adb77b25ac51ef510ca76d20a3f08db 350 Gene3D G3DSA:3.90.79.10 225 346 4.6E-9 T 29-03-2018 CVS42_RS02385 8adb77b25ac51ef510ca76d20a3f08db 350 Pfam PF14815 NUDIX domain 235 344 4.6E-21 T 29-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CVS42_RS02385 8adb77b25ac51ef510ca76d20a3f08db 350 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 29-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CVS42_RS02385 8adb77b25ac51ef510ca76d20a3f08db 350 SUPERFAMILY SSF48150 4 225 1.27E-77 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CVS42_RS02385 8adb77b25ac51ef510ca76d20a3f08db 350 Gene3D G3DSA:1.10.340.30 21 117 7.5E-34 T 29-03-2018 CVS42_RS02385 8adb77b25ac51ef510ca76d20a3f08db 350 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 167 2.8E-21 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CVS42_RS12265 5a36e91013101fcaec0517fdc767b110 75 SMART SM00899 1 74 2.5E-19 T 29-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CVS42_RS12265 5a36e91013101fcaec0517fdc767b110 75 Pfam PF04023 FeoA domain 1 74 4.0E-15 T 29-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CVS42_RS12265 5a36e91013101fcaec0517fdc767b110 75 Gene3D G3DSA:2.30.30.90 4 75 1.7E-15 T 29-03-2018 CVS42_RS12265 5a36e91013101fcaec0517fdc767b110 75 SUPERFAMILY SSF50037 5 74 1.92E-17 T 29-03-2018 IPR008988 Transcriptional repressor, C-terminal CVS42_RS08300 6e2c68959b2764997121429930c513a8 521 PIRSF PIRSF002741 4 521 4.2E-104 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CVS42_RS08300 6e2c68959b2764997121429930c513a8 521 Gene3D G3DSA:3.40.190.10 190 285 4.0E-27 T 29-03-2018 CVS42_RS08300 6e2c68959b2764997121429930c513a8 521 Gene3D G3DSA:3.10.105.10 286 493 6.0E-58 T 29-03-2018 CVS42_RS08300 6e2c68959b2764997121429930c513a8 521 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 60 438 2.7E-91 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CVS42_RS08300 6e2c68959b2764997121429930c513a8 521 Gene3D G3DSA:3.90.76.10 24 189 2.1E-32 T 29-03-2018 CVS42_RS08300 6e2c68959b2764997121429930c513a8 521 SUPERFAMILY SSF53850 17 518 1.07E-140 T 29-03-2018 CVS42_RS12465 729afe0a75f221779c582f0f2847b87c 196 Gene3D G3DSA:2.60.40.550 62 134 9.9E-26 T 29-03-2018 CVS42_RS12465 729afe0a75f221779c582f0f2847b87c 196 Pfam PF03974 Ecotin 65 186 2.2E-46 T 29-03-2018 IPR023189 Proteinase inhibitor I11, ecotin domain CVS42_RS12465 729afe0a75f221779c582f0f2847b87c 196 Gene3D G3DSA:4.10.1230.10 140 193 6.5E-23 T 29-03-2018 IPR027438 Ecotin, C-terminal CVS42_RS12465 729afe0a75f221779c582f0f2847b87c 196 SUPERFAMILY SSF49772 63 193 5.89E-49 T 29-03-2018 IPR023189 Proteinase inhibitor I11, ecotin domain CVS42_RS12465 729afe0a75f221779c582f0f2847b87c 196 PIRSF PIRSF006865 45 196 1.1E-47 T 29-03-2018 IPR005658 Proteinase inhibitor I11, ecotin CVS42_RS04350 b0cb4539367ea87247fdb021ce457d34 399 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 3 397 4.9E-177 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CVS42_RS04350 b0cb4539367ea87247fdb021ce457d34 399 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 397 24.969 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CVS42_RS04350 b0cb4539367ea87247fdb021ce457d34 399 Pfam PF03616 Sodium/glutamate symporter 2 366 3.3E-153 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CVS42_RS18805 fe065c7029ddd3605754a466c88c55e9 427 Gene3D G3DSA:3.40.50.720 1 86 3.7E-10 T 29-03-2018 CVS42_RS18805 fe065c7029ddd3605754a466c88c55e9 427 SUPERFAMILY SSF53244 288 426 3.01E-42 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CVS42_RS18805 fe065c7029ddd3605754a466c88c55e9 427 SUPERFAMILY SSF53623 87 286 8.37E-53 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS18805 fe065c7029ddd3605754a466c88c55e9 427 Pfam PF08245 Mur ligase middle domain 102 269 2.2E-24 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS18805 fe065c7029ddd3605754a466c88c55e9 427 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 1 427 32.371 T 29-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS18805 fe065c7029ddd3605754a466c88c55e9 427 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 2 425 1.1E-122 T 29-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS18805 fe065c7029ddd3605754a466c88c55e9 427 Gene3D G3DSA:3.90.190.20 289 424 1.0E-36 T 29-03-2018 CVS42_RS18805 fe065c7029ddd3605754a466c88c55e9 427 SUPERFAMILY SSF51984 2 86 8.76E-17 T 29-03-2018 CVS42_RS18805 fe065c7029ddd3605754a466c88c55e9 427 Gene3D G3DSA:3.40.1190.10 87 288 1.2E-54 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS18805 fe065c7029ddd3605754a466c88c55e9 427 Pfam PF02875 Mur ligase family, glutamate ligase domain 290 361 1.9E-8 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CVS42_RS10070 796df110e88dd24604c2da9accff7098 315 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 204 314 7.2E-21 T 29-03-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS10070 796df110e88dd24604c2da9accff7098 315 Gene3D G3DSA:3.40.50.300 8 161 1.1E-27 T 29-03-2018 CVS42_RS10070 796df110e88dd24604c2da9accff7098 315 Gene3D G3DSA:1.20.272.10 201 315 5.8E-9 T 29-03-2018 CVS42_RS10070 796df110e88dd24604c2da9accff7098 315 SUPERFAMILY SSF48019 206 293 8.5E-8 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CVS42_RS10070 796df110e88dd24604c2da9accff7098 315 SMART SM00382 21 163 7.5E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS10070 796df110e88dd24604c2da9accff7098 315 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 9 192 3.0E-62 T 29-03-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS10070 796df110e88dd24604c2da9accff7098 315 Pfam PF13177 DNA polymerase III, delta subunit 10 157 5.2E-47 T 29-03-2018 CVS42_RS10070 796df110e88dd24604c2da9accff7098 315 SUPERFAMILY SSF52540 8 196 1.36E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.1E-53 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 4.1E-53 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.1E-53 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 4.1E-53 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 4.1E-53 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.1E-53 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 4.1E-53 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 857 23.447 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 Gene3D G3DSA:1.10.730.10 562 857 7.3E-52 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 Gene3D G3DSA:3.40.50.620 22 231 4.7E-68 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 Gene3D G3DSA:3.40.50.620 404 561 4.5E-43 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 Pfam PF08264 Anticodon-binding domain of tRNA 698 817 1.1E-16 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 SUPERFAMILY SSF47323 661 857 7.85E-36 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 Gene3D G3DSA:3.90.740.10 232 403 4.0E-53 T 29-03-2018 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 4.5E-27 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 416 571 1.3E-8 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 652 5.7E-7 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 SUPERFAMILY SSF52374 415 666 5.25E-140 T 29-03-2018 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 SUPERFAMILY SSF52374 7 226 5.25E-140 T 29-03-2018 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 2.0E-80 T 29-03-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 7 857 0.0 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CVS42_RS04445 b397b11a461cc4abd2d5fa727a272983 858 SUPERFAMILY SSF50677 226 414 3.45E-56 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CVS42_RS02830 17d1d81e0f89c86766df31e88d1cad77 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 8 124 1.9E-36 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CVS42_RS02830 17d1d81e0f89c86766df31e88d1cad77 135 Gene3D G3DSA:3.10.129.10 1 134 1.7E-35 T 29-03-2018 CVS42_RS02830 17d1d81e0f89c86766df31e88d1cad77 135 SUPERFAMILY SSF54637 1 130 1.11E-39 T 29-03-2018 IPR029069 HotDog domain CVS42_RS02830 17d1d81e0f89c86766df31e88d1cad77 135 PIRSF PIRSF003230 1 135 7.0E-46 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CVS42_RS02830 17d1d81e0f89c86766df31e88d1cad77 135 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 5 127 7.9E-47 T 29-03-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 CVS42_RS02830 17d1d81e0f89c86766df31e88d1cad77 135 Pfam PF03061 Thioesterase superfamily 19 103 9.4E-17 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CVS42_RS21620 f6b022aae860f8cf7f2c2f1e9220f1ca 152 Pfam PF00692 dUTPase 18 150 2.2E-40 T 29-03-2018 IPR029054 dUTPase-like CVS42_RS21620 f6b022aae860f8cf7f2c2f1e9220f1ca 152 SUPERFAMILY SSF51283 1 151 5.23E-55 T 29-03-2018 IPR029054 dUTPase-like CVS42_RS21620 f6b022aae860f8cf7f2c2f1e9220f1ca 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 151 34.212 T 29-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 CVS42_RS21620 f6b022aae860f8cf7f2c2f1e9220f1ca 152 Gene3D G3DSA:2.70.40.10 114 151 2.4E-16 T 29-03-2018 CVS42_RS21620 f6b022aae860f8cf7f2c2f1e9220f1ca 152 Gene3D G3DSA:2.70.40.10 1 113 1.8E-39 T 29-03-2018 CVS42_RS21620 f6b022aae860f8cf7f2c2f1e9220f1ca 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 151 2.2E-49 T 29-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 CVS42_RS13265 dfa529c53bb8990e313bd66d66e97be4 670 Gene3D G3DSA:1.20.120.330 37 319 6.1E-6 T 29-03-2018 CVS42_RS13265 dfa529c53bb8990e313bd66d66e97be4 670 Pfam PF00672 HAMP domain 340 382 7.6E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS13265 dfa529c53bb8990e313bd66d66e97be4 670 SMART SM00283 406 667 4.5E-74 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS13265 dfa529c53bb8990e313bd66d66e97be4 670 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 465 634 2.9E-43 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS13265 dfa529c53bb8990e313bd66d66e97be4 670 SMART SM00304 339 391 2.0E-5 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS13265 dfa529c53bb8990e313bd66d66e97be4 670 SUPERFAMILY SSF58104 359 668 4.45E-75 T 29-03-2018 CVS42_RS13265 dfa529c53bb8990e313bd66d66e97be4 670 Gene3D G3DSA:1.10.287.950 338 440 4.3E-5 T 29-03-2018 CVS42_RS13265 dfa529c53bb8990e313bd66d66e97be4 670 Gene3D G3DSA:1.10.287.950 441 670 6.5E-54 T 29-03-2018 CVS42_RS07215 f001a5dde9628cb89cb3bfd29a47d23d 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 360 6.2E-150 T 29-03-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CVS42_RS07215 f001a5dde9628cb89cb3bfd29a47d23d 365 SUPERFAMILY SSF103025 2 277 2.51E-90 T 29-03-2018 CVS42_RS07215 f001a5dde9628cb89cb3bfd29a47d23d 365 Gene3D G3DSA:3.30.1360.120 2 122 1.7E-33 T 29-03-2018 CVS42_RS07215 f001a5dde9628cb89cb3bfd29a47d23d 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 360 43.536 T 29-03-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CVS42_RS07215 f001a5dde9628cb89cb3bfd29a47d23d 365 Gene3D G3DSA:2.40.30.110 278 364 2.3E-20 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CVS42_RS07215 f001a5dde9628cb89cb3bfd29a47d23d 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 253 2.7E-85 T 29-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal CVS42_RS07215 f001a5dde9628cb89cb3bfd29a47d23d 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 354 1.7E-19 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CVS42_RS07215 f001a5dde9628cb89cb3bfd29a47d23d 365 Gene3D G3DSA:3.30.1360.120 123 231 5.5E-27 T 29-03-2018 CVS42_RS07215 f001a5dde9628cb89cb3bfd29a47d23d 365 PIRSF PIRSF006487 1 364 4.6E-82 T 29-03-2018 CVS42_RS07215 f001a5dde9628cb89cb3bfd29a47d23d 365 SUPERFAMILY SSF101790 270 362 4.58E-26 T 29-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CVS42_RS07215 f001a5dde9628cb89cb3bfd29a47d23d 365 Gene3D G3DSA:4.10.1250.10 232 275 2.1E-15 T 29-03-2018 CVS42_RS04560 005671c022aec7856e46d47946271efe 318 Gene3D G3DSA:3.40.50.720 114 288 7.1E-50 T 29-03-2018 CVS42_RS04560 005671c022aec7856e46d47946271efe 318 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CVS42_RS04560 005671c022aec7856e46d47946271efe 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 287 5.0E-55 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CVS42_RS04560 005671c022aec7856e46d47946271efe 318 Gene3D G3DSA:3.40.50.720 1 113 2.1E-26 T 29-03-2018 CVS42_RS04560 005671c022aec7856e46d47946271efe 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 32 315 4.4E-23 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CVS42_RS04560 005671c022aec7856e46d47946271efe 318 SUPERFAMILY SSF52283 4 137 2.13E-28 T 29-03-2018 CVS42_RS04560 005671c022aec7856e46d47946271efe 318 SUPERFAMILY SSF51735 101 288 2.9E-54 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS04560 005671c022aec7856e46d47946271efe 318 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CVS42_RS02915 9250f12f86c1a917e320c7a00ea91ffe 187 Pfam PF10973 Protein of unknown function (DUF2799) 30 111 3.9E-24 T 29-03-2018 IPR021242 Protein of unknown function DUF2799 CVS42_RS09525 54b4bd50e1c8e2df1cffbbe6a1677619 360 ProSitePatterns PS01215 Mrp family signature. 202 218 - T 29-03-2018 IPR000808 Mrp, conserved site GO:0005524 CVS42_RS09525 54b4bd50e1c8e2df1cffbbe6a1677619 360 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 95 338 2.3E-99 T 29-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CVS42_RS09525 54b4bd50e1c8e2df1cffbbe6a1677619 360 SUPERFAMILY SSF117916 4 73 2.19E-5 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CVS42_RS09525 54b4bd50e1c8e2df1cffbbe6a1677619 360 Hamap MF_02040 Iron-sulfur cluster carrier protein. 87 339 35.837 T 29-03-2018 IPR019591 Mrp/NBP35 ATP-binding protein CVS42_RS09525 54b4bd50e1c8e2df1cffbbe6a1677619 360 Gene3D G3DSA:3.30.300.130 2 88 0.0014 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CVS42_RS09525 54b4bd50e1c8e2df1cffbbe6a1677619 360 SUPERFAMILY SSF52540 89 320 1.38E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09525 54b4bd50e1c8e2df1cffbbe6a1677619 360 Gene3D G3DSA:3.40.50.300 89 316 1.2E-63 T 29-03-2018 CVS42_RS21715 62a8b15e8589a5069559aa5e6e86cc11 645 Gene3D G3DSA:3.40.50.980 85 268 1.4E-36 T 29-03-2018 CVS42_RS21715 62a8b15e8589a5069559aa5e6e86cc11 645 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 5 643 1.2E-274 T 29-03-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 CVS42_RS21715 62a8b15e8589a5069559aa5e6e86cc11 645 Gene3D G3DSA:3.40.50.980 269 429 1.6E-23 T 29-03-2018 CVS42_RS21715 62a8b15e8589a5069559aa5e6e86cc11 645 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 37 92 2.3E-6 T 29-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CVS42_RS21715 62a8b15e8589a5069559aa5e6e86cc11 645 Pfam PF00501 AMP-binding enzyme 95 519 6.6E-51 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CVS42_RS21715 62a8b15e8589a5069559aa5e6e86cc11 645 Gene3D G3DSA:3.30.300.30 518 637 7.6E-18 T 29-03-2018 CVS42_RS21715 62a8b15e8589a5069559aa5e6e86cc11 645 SUPERFAMILY SSF56801 21 637 1.57E-129 T 29-03-2018 CVS42_RS21715 62a8b15e8589a5069559aa5e6e86cc11 645 ProSitePatterns PS00455 Putative AMP-binding domain signature. 263 274 - T 29-03-2018 IPR020845 AMP-binding, conserved site CVS42_RS21715 62a8b15e8589a5069559aa5e6e86cc11 645 Pfam PF13193 AMP-binding enzyme C-terminal domain 537 607 4.5E-7 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CVS42_RS09585 65a7835b9a64b0439340294edab3ec86 453 SMART SM00642 10 367 6.5E-53 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS09585 65a7835b9a64b0439340294edab3ec86 453 Gene3D G3DSA:3.20.20.80 6 361 1.9E-48 T 29-03-2018 CVS42_RS09585 65a7835b9a64b0439340294edab3ec86 453 PRINTS PR00110 Alpha-amylase signature 51 68 1.8E-14 T 29-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 CVS42_RS09585 65a7835b9a64b0439340294edab3ec86 453 PRINTS PR00110 Alpha-amylase signature 84 95 1.8E-14 T 29-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 CVS42_RS09585 65a7835b9a64b0439340294edab3ec86 453 PRINTS PR00110 Alpha-amylase signature 292 304 1.8E-14 T 29-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 CVS42_RS09585 65a7835b9a64b0439340294edab3ec86 453 PRINTS PR00110 Alpha-amylase signature 197 208 1.8E-14 T 29-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 CVS42_RS09585 65a7835b9a64b0439340294edab3ec86 453 PRINTS PR00110 Alpha-amylase signature 226 244 1.8E-14 T 29-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 CVS42_RS09585 65a7835b9a64b0439340294edab3ec86 453 Pfam PF00128 Alpha amylase, catalytic domain 23 223 9.2E-18 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS09585 65a7835b9a64b0439340294edab3ec86 453 Gene3D G3DSA:2.60.40.1180 375 453 1.6E-9 T 29-03-2018 CVS42_RS09585 65a7835b9a64b0439340294edab3ec86 453 SUPERFAMILY SSF51445 8 353 1.88E-66 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS18835 7cae2ebe176f8c77b4eef80b00f0c12d 312 SUPERFAMILY SSF53335 7 113 6.72E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS18835 7cae2ebe176f8c77b4eef80b00f0c12d 312 SUPERFAMILY SSF53335 213 310 6.72E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS18835 7cae2ebe176f8c77b4eef80b00f0c12d 312 Pfam PF01795 MraW methylase family 5 309 2.5E-113 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CVS42_RS18835 7cae2ebe176f8c77b4eef80b00f0c12d 312 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 309 8.0E-120 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CVS42_RS18835 7cae2ebe176f8c77b4eef80b00f0c12d 312 Gene3D G3DSA:1.10.150.170 114 215 1.7E-35 T 29-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CVS42_RS18835 7cae2ebe176f8c77b4eef80b00f0c12d 312 PIRSF PIRSF004486 1 311 3.5E-100 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CVS42_RS18835 7cae2ebe176f8c77b4eef80b00f0c12d 312 SUPERFAMILY SSF81799 114 213 6.8E-34 T 29-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CVS42_RS18835 7cae2ebe176f8c77b4eef80b00f0c12d 312 Gene3D G3DSA:3.40.50.150 6 113 3.5E-6 T 29-03-2018 CVS42_RS18835 7cae2ebe176f8c77b4eef80b00f0c12d 312 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 310 37.925 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CVS42_RS18150 6824f29da165270a9ef4c817ebb13dc3 324 PIRSF PIRSF004491 1 310 7.1E-106 T 29-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CVS42_RS18150 6824f29da165270a9ef4c817ebb13dc3 324 SUPERFAMILY SSF82114 174 308 3.49E-46 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CVS42_RS18150 6824f29da165270a9ef4c817ebb13dc3 324 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 305 6.5E-103 T 29-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CVS42_RS18150 6824f29da165270a9ef4c817ebb13dc3 324 Gene3D G3DSA:2.40.30.30 180 316 1.3E-40 T 29-03-2018 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 CVS42_RS18150 6824f29da165270a9ef4c817ebb13dc3 324 Pfam PF06574 FAD synthetase 12 166 1.1E-54 T 29-03-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CVS42_RS18150 6824f29da165270a9ef4c817ebb13dc3 324 SUPERFAMILY SSF52374 15 175 1.27E-33 T 29-03-2018 CVS42_RS18150 6824f29da165270a9ef4c817ebb13dc3 324 SMART SM00904 183 306 3.9E-64 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CVS42_RS18150 6824f29da165270a9ef4c817ebb13dc3 324 Pfam PF01687 Riboflavin kinase 184 305 2.6E-37 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CVS42_RS18150 6824f29da165270a9ef4c817ebb13dc3 324 Gene3D G3DSA:3.40.50.620 1 179 2.0E-46 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS19255 e6e0c38187f396b8d22293f7019047fb 90 SUPERFAMILY SSF52091 2 89 1.96E-12 T 29-03-2018 IPR002645 STAS domain CVS42_RS19255 e6e0c38187f396b8d22293f7019047fb 90 Gene3D G3DSA:3.30.750.24 1 90 2.8E-7 T 29-03-2018 IPR002645 STAS domain CVS42_RS19255 e6e0c38187f396b8d22293f7019047fb 90 Pfam PF13466 STAS domain 1 76 7.5E-15 T 29-03-2018 IPR002645 STAS domain CVS42_RS01490 1abfb3add0f5ca94ee5d29bdadfc6f80 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.4E-131 T 29-03-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 CVS42_RS01490 1abfb3add0f5ca94ee5d29bdadfc6f80 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 354 5.9E-70 T 29-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CVS42_RS03130 cc379bd2119a8b1da953b7e8a8d52768 772 Gene3D G3DSA:3.30.2060.10 70 157 1.7E-26 T 29-03-2018 CVS42_RS03130 cc379bd2119a8b1da953b7e8a8d52768 772 Pfam PF00905 Penicillin binding protein transpeptidase domain 432 669 2.1E-26 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CVS42_RS03130 cc379bd2119a8b1da953b7e8a8d52768 772 PIRSF PIRSF002799 1 772 0.0 T 29-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CVS42_RS03130 cc379bd2119a8b1da953b7e8a8d52768 772 SUPERFAMILY SSF56601 371 747 6.22E-112 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CVS42_RS03130 cc379bd2119a8b1da953b7e8a8d52768 772 SUPERFAMILY SSF56601 320 342 6.22E-112 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CVS42_RS03130 cc379bd2119a8b1da953b7e8a8d52768 772 Gene3D G3DSA:1.20.5.100 3 53 4.2E-15 T 29-03-2018 CVS42_RS03130 cc379bd2119a8b1da953b7e8a8d52768 772 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 26 744 3.7E-294 T 29-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CVS42_RS03130 cc379bd2119a8b1da953b7e8a8d52768 772 Gene3D G3DSA:3.40.710.10 363 750 1.5E-95 T 29-03-2018 CVS42_RS03130 cc379bd2119a8b1da953b7e8a8d52768 772 Pfam PF14814 Bifunctional transglycosylase second domain 71 155 5.2E-26 T 29-03-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CVS42_RS03130 cc379bd2119a8b1da953b7e8a8d52768 772 Gene3D G3DSA:1.10.3810.10 170 362 1.6E-64 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CVS42_RS03130 cc379bd2119a8b1da953b7e8a8d52768 772 Pfam PF00912 Transglycosylase 167 337 2.3E-57 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CVS42_RS03130 cc379bd2119a8b1da953b7e8a8d52768 772 SUPERFAMILY SSF53955 164 360 3.94E-68 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS06995 be93d75a1e03daa3cc2790aa81c9606c 296 SMART SM00342 199 282 3.7E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS06995 be93d75a1e03daa3cc2790aa81c9606c 296 Gene3D G3DSA:1.10.10.60 258 295 6.9E-12 T 29-03-2018 CVS42_RS06995 be93d75a1e03daa3cc2790aa81c9606c 296 SUPERFAMILY SSF46689 235 283 3.58E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS06995 be93d75a1e03daa3cc2790aa81c9606c 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 236 278 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CVS42_RS06995 be93d75a1e03daa3cc2790aa81c9606c 296 SUPERFAMILY SSF46689 185 232 2.6E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS06995 be93d75a1e03daa3cc2790aa81c9606c 296 Gene3D G3DSA:3.90.1240.10 122 257 1.4E-19 T 29-03-2018 CVS42_RS06995 be93d75a1e03daa3cc2790aa81c9606c 296 Pfam PF12833 Helix-turn-helix domain 205 282 5.8E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS06995 be93d75a1e03daa3cc2790aa81c9606c 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 282 1.3E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS06995 be93d75a1e03daa3cc2790aa81c9606c 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 266 1.3E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS18425 dad9f85c41d7921759e85177c1a45e4c 276 Pfam PF02517 CAAX protease self-immunity 175 263 1.3E-18 T 29-03-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 CVS42_RS18775 be17d579f484039e64de2ae9b85135fd 383 Gene3D G3DSA:3.40.50.1440 5 214 1.1E-41 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CVS42_RS18775 be17d579f484039e64de2ae9b85135fd 383 SMART SM00864 13 205 3.7E-111 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CVS42_RS18775 be17d579f484039e64de2ae9b85135fd 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 355 38.302 T 29-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 CVS42_RS18775 be17d579f484039e64de2ae9b85135fd 383 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 29-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CVS42_RS18775 be17d579f484039e64de2ae9b85135fd 383 SMART SM00865 207 325 5.4E-56 T 29-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 CVS42_RS18775 be17d579f484039e64de2ae9b85135fd 383 Pfam PF12327 FtsZ family, C-terminal domain 222 316 9.6E-39 T 29-03-2018 IPR024757 Cell division protein FtsZ, C-terminal CVS42_RS18775 be17d579f484039e64de2ae9b85135fd 383 SUPERFAMILY SSF55307 204 320 4.81E-43 T 29-03-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 CVS42_RS18775 be17d579f484039e64de2ae9b85135fd 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 5.9E-39 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CVS42_RS18775 be17d579f484039e64de2ae9b85135fd 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 333 1.4E-137 T 29-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 CVS42_RS18775 be17d579f484039e64de2ae9b85135fd 383 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 29-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CVS42_RS18775 be17d579f484039e64de2ae9b85135fd 383 PRINTS PR00423 Cell division protein FtsZ signature 212 233 2.6E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CVS42_RS18775 be17d579f484039e64de2ae9b85135fd 383 PRINTS PR00423 Cell division protein FtsZ signature 98 118 2.6E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CVS42_RS18775 be17d579f484039e64de2ae9b85135fd 383 PRINTS PR00423 Cell division protein FtsZ signature 189 211 2.6E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CVS42_RS18775 be17d579f484039e64de2ae9b85135fd 383 PRINTS PR00423 Cell division protein FtsZ signature 126 147 2.6E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CVS42_RS18775 be17d579f484039e64de2ae9b85135fd 383 Gene3D G3DSA:3.30.1330.20 215 325 1.4E-45 T 29-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 CVS42_RS18775 be17d579f484039e64de2ae9b85135fd 383 SUPERFAMILY SSF52490 13 208 1.7E-69 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CVS42_RS10385 c687c9a462a6ec7d4e65812bd03bc4b1 95 SUPERFAMILY SSF50715 3 95 8.2E-31 T 29-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CVS42_RS10385 c687c9a462a6ec7d4e65812bd03bc4b1 95 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 3 95 26.314 T 29-03-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CVS42_RS10385 c687c9a462a6ec7d4e65812bd03bc4b1 95 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 5 95 7.0E-45 T 29-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CVS42_RS10385 c687c9a462a6ec7d4e65812bd03bc4b1 95 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 95 4.1E-23 T 29-03-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CVS42_RS10385 c687c9a462a6ec7d4e65812bd03bc4b1 95 Pfam PF01386 Ribosomal L25p family 6 92 1.9E-24 T 29-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CVS42_RS10385 c687c9a462a6ec7d4e65812bd03bc4b1 95 Gene3D G3DSA:2.40.240.10 2 95 1.2E-30 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CVS42_RS12005 ce0befab8898b3dce89ed75fb62426b6 273 Gene3D G3DSA:3.40.190.10 2 165 1.7E-32 T 29-03-2018 CVS42_RS12005 ce0befab8898b3dce89ed75fb62426b6 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 262 9.2E-51 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS12005 ce0befab8898b3dce89ed75fb62426b6 273 SUPERFAMILY SSF53850 12 262 8.58E-58 T 29-03-2018 CVS42_RS12005 ce0befab8898b3dce89ed75fb62426b6 273 SMART SM00079 41 263 0.0026 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CVS42_RS12005 ce0befab8898b3dce89ed75fb62426b6 273 SMART SM00062 41 264 1.7E-42 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS12005 ce0befab8898b3dce89ed75fb62426b6 273 Gene3D G3DSA:3.40.190.10 166 270 1.3E-10 T 29-03-2018 CVS42_RS12645 e7c56e8450b87c74b8bd5820490a187a 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 118 8.7E-10 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CVS42_RS12645 e7c56e8450b87c74b8bd5820490a187a 122 Gene3D G3DSA:3.10.180.10 1 121 6.6E-22 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS12645 e7c56e8450b87c74b8bd5820490a187a 122 SUPERFAMILY SSF54593 1 118 3.76E-24 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS04690 85830de68c29b9fecd428d06b88e21e9 625 Gene3D G3DSA:1.10.287.950 315 405 3.1E-9 T 29-03-2018 CVS42_RS04690 85830de68c29b9fecd428d06b88e21e9 625 Gene3D G3DSA:1.10.287.950 406 625 6.7E-52 T 29-03-2018 CVS42_RS04690 85830de68c29b9fecd428d06b88e21e9 625 Gene3D G3DSA:3.30.450.20 156 273 3.2E-19 T 29-03-2018 CVS42_RS04690 85830de68c29b9fecd428d06b88e21e9 625 SMART SM00304 294 348 1.4E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS04690 85830de68c29b9fecd428d06b88e21e9 625 Pfam PF02743 Cache domain 76 254 1.2E-25 T 29-03-2018 IPR033479 Double Cache domain 1 CVS42_RS04690 85830de68c29b9fecd428d06b88e21e9 625 SUPERFAMILY SSF58104 316 625 3.66E-77 T 29-03-2018 CVS42_RS04690 85830de68c29b9fecd428d06b88e21e9 625 Pfam PF00672 HAMP domain 295 344 1.4E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS04690 85830de68c29b9fecd428d06b88e21e9 625 SMART SM00283 359 624 9.1E-66 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS04690 85830de68c29b9fecd428d06b88e21e9 625 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 409 591 1.8E-40 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS04690 85830de68c29b9fecd428d06b88e21e9 625 SUPERFAMILY SSF103190 74 174 2.35E-16 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CVS42_RS04690 85830de68c29b9fecd428d06b88e21e9 625 Gene3D G3DSA:3.30.450.20 24 155 1.4E-22 T 29-03-2018 CVS42_RS08220 d695c09106b0671840514c981fd5f2b0 245 Gene3D G3DSA:2.40.160.20 21 244 9.7E-12 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS08220 d695c09106b0671840514c981fd5f2b0 245 SUPERFAMILY SSF56925 49 136 5.49E-6 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS08220 d695c09106b0671840514c981fd5f2b0 245 SUPERFAMILY SSF56925 186 244 5.49E-6 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS09755 6f535a829858519a5140ace0e8c35427 251 SUPERFAMILY SSF51206 23 162 9.82E-31 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CVS42_RS09755 6f535a829858519a5140ace0e8c35427 251 Gene3D G3DSA:1.10.10.10 165 249 3.3E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS09755 6f535a829858519a5140ace0e8c35427 251 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 29-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CVS42_RS09755 6f535a829858519a5140ace0e8c35427 251 Gene3D G3DSA:2.60.120.10 24 164 1.1E-19 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS09755 6f535a829858519a5140ace0e8c35427 251 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 6.0E-13 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CVS42_RS09755 6f535a829858519a5140ace0e8c35427 251 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 6.0E-13 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CVS42_RS09755 6f535a829858519a5140ace0e8c35427 251 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 1.5E-14 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CVS42_RS09755 6f535a829858519a5140ace0e8c35427 251 SUPERFAMILY SSF46785 165 242 8.73E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS09755 6f535a829858519a5140ace0e8c35427 251 Pfam PF13545 Crp-like helix-turn-helix domain 168 239 3.3E-17 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CVS42_RS09755 6f535a829858519a5140ace0e8c35427 251 SMART SM00419 187 235 1.6E-17 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CVS42_RS09755 6f535a829858519a5140ace0e8c35427 251 SMART SM00100 30 151 1.8E-19 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 SUPERFAMILY SSF52540 159 545 9.53E-97 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 Gene3D G3DSA:3.40.50.300 157 342 1.7E-24 T 29-03-2018 CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 SUPERFAMILY SSF81923 4 156 3.53E-41 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 855 0.0 T 29-03-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 Gene3D G3DSA:1.10.8.60 343 547 1.0E-44 T 29-03-2018 CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.5E-11 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 5.3E-13 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 320 4.4E-13 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 Gene3D G3DSA:1.10.8.60 766 857 3.1E-22 T 29-03-2018 CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 6.4E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 6.4E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 6.4E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 6.4E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 SUPERFAMILY SSF52540 546 843 1.46E-82 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 844 1.1E-24 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 Gene3D G3DSA:3.40.50.300 552 765 3.0E-55 T 29-03-2018 CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 Gene3D G3DSA:1.10.1780.10 2 151 1.6E-31 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 SMART SM00382 597 758 5.9E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 SMART SM00382 198 344 3.9E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 SMART SM01086 766 855 2.6E-34 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CVS42_RS20855 663ce4e367ab366c8988e758c65dd6f8 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 3.4E-56 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CVS42_RS02970 5a2ce6d63f4e546312c2c01971a0ce8c 725 SUPERFAMILY SSF51011 621 723 2.78E-32 T 29-03-2018 CVS42_RS02970 5a2ce6d63f4e546312c2c01971a0ce8c 725 Pfam PF00128 Alpha amylase, catalytic domain 273 345 3.5E-8 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS02970 5a2ce6d63f4e546312c2c01971a0ce8c 725 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 96 724 42.163 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 CVS42_RS02970 5a2ce6d63f4e546312c2c01971a0ce8c 725 Gene3D G3DSA:2.60.40.10 1 102 5.2E-7 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS02970 5a2ce6d63f4e546312c2c01971a0ce8c 725 SMART SM00642 247 656 9.1E-7 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS02970 5a2ce6d63f4e546312c2c01971a0ce8c 725 PIRSF PIRSF000463 1 725 1.2E-277 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 CVS42_RS02970 5a2ce6d63f4e546312c2c01971a0ce8c 725 SUPERFAMILY SSF81296 113 223 7.87E-25 T 29-03-2018 IPR014756 Immunoglobulin E-set CVS42_RS02970 5a2ce6d63f4e546312c2c01971a0ce8c 725 Gene3D G3DSA:2.60.40.1180 633 724 9.4E-31 T 29-03-2018 CVS42_RS02970 5a2ce6d63f4e546312c2c01971a0ce8c 725 SUPERFAMILY SSF51445 238 618 6.15E-107 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS02970 5a2ce6d63f4e546312c2c01971a0ce8c 725 Gene3D G3DSA:3.20.20.80 233 632 2.0E-71 T 29-03-2018 CVS42_RS02970 5a2ce6d63f4e546312c2c01971a0ce8c 725 Gene3D G3DSA:2.60.40.10 113 230 4.1E-28 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS02970 5a2ce6d63f4e546312c2c01971a0ce8c 725 SUPERFAMILY SSF81296 10 99 1.33E-9 T 29-03-2018 IPR014756 Immunoglobulin E-set CVS42_RS02970 5a2ce6d63f4e546312c2c01971a0ce8c 725 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 625 722 1.3E-20 T 29-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CVS42_RS02970 5a2ce6d63f4e546312c2c01971a0ce8c 725 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 112 721 3.5E-255 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 CVS42_RS02970 5a2ce6d63f4e546312c2c01971a0ce8c 725 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 128 202 2.4E-16 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 CVS42_RS20715 b850607bd7a35c304c18c21f7f55dbba 276 Gene3D G3DSA:1.10.10.60 166 226 3.0E-12 T 29-03-2018 CVS42_RS20715 b850607bd7a35c304c18c21f7f55dbba 276 Gene3D G3DSA:1.10.10.60 227 276 7.4E-10 T 29-03-2018 CVS42_RS20715 b850607bd7a35c304c18c21f7f55dbba 276 Pfam PF12833 Helix-turn-helix domain 193 270 2.7E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS20715 b850607bd7a35c304c18c21f7f55dbba 276 SUPERFAMILY SSF46689 170 221 5.34E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS20715 b850607bd7a35c304c18c21f7f55dbba 276 SUPERFAMILY SSF51215 31 153 1.01E-6 T 29-03-2018 CVS42_RS20715 b850607bd7a35c304c18c21f7f55dbba 276 SUPERFAMILY SSF46689 223 271 9.41E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS20715 b850607bd7a35c304c18c21f7f55dbba 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 265 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CVS42_RS20715 b850607bd7a35c304c18c21f7f55dbba 276 Pfam PF12852 Cupin 2 156 3.5E-25 T 29-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain CVS42_RS20715 b850607bd7a35c304c18c21f7f55dbba 276 SMART SM00342 187 269 3.5E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS20715 b850607bd7a35c304c18c21f7f55dbba 276 Gene3D G3DSA:2.60.120.280 7 157 5.1E-13 T 29-03-2018 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 8.4E-21 T 29-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 Gene3D G3DSA:3.30.70.380 698 794 3.6E-24 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 SUPERFAMILY SSF50249 35 194 9.55E-50 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 Gene3D G3DSA:3.50.40.10 197 394 1.8E-72 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 Gene3D G3DSA:3.30.56.10 402 475 2.4E-26 T 29-03-2018 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 Gene3D G3DSA:3.30.930.10 493 690 5.9E-41 T 29-03-2018 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 Gene3D G3DSA:3.30.56.10 1 55 1.6E-10 T 29-03-2018 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 Pfam PF01588 Putative tRNA binding domain 45 145 1.0E-26 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 SUPERFAMILY SSF54991 697 794 1.14E-29 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 Gene3D G3DSA:2.40.50.140 56 155 1.4E-38 T 29-03-2018 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.622 T 29-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 SMART SM00896 701 794 3.6E-44 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 SUPERFAMILY SSF55681 467 690 1.49E-54 T 29-03-2018 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 Pfam PF03483 B3/4 domain 213 385 2.6E-69 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 8.4E-277 T 29-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 Gene3D G3DSA:3.30.56.10 156 184 0.41 T 29-03-2018 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 SMART SM00874 403 471 2.3E-32 T 29-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 SMART SM00873 212 385 1.2E-92 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 SUPERFAMILY SSF56037 196 396 1.05E-74 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 SUPERFAMILY SSF46955 404 475 1.46E-21 T 29-03-2018 IPR009061 Putative DNA-binding domain CVS42_RS09625 5a3b8a7810208fbcb4b68e9ce8a0d51c 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 3.5E-28 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CVS42_RS06945 108e1e5a07bf79693b11c5b773b5292b 322 Gene3D G3DSA:3.90.245.10 1 316 1.4E-94 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CVS42_RS06945 108e1e5a07bf79693b11c5b773b5292b 322 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 291 2.5E-79 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CVS42_RS06945 108e1e5a07bf79693b11c5b773b5292b 322 SUPERFAMILY SSF53590 3 310 6.8E-91 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CVS42_RS15130 7d0a2538e62d7c6cd6ac43e75301bde4 177 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 29 169 2.9E-9 T 29-03-2018 IPR018958 Knr4/Smi1-like domain CVS42_RS15130 7d0a2538e62d7c6cd6ac43e75301bde4 177 SUPERFAMILY SSF160631 10 169 1.02E-11 T 29-03-2018 CVS42_RS15130 7d0a2538e62d7c6cd6ac43e75301bde4 177 Gene3D G3DSA:3.40.1580.10 6 175 8.1E-12 T 29-03-2018 CVS42_RS13805 3d540a5a707f5e37728e9f2209f132a8 1266 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 933 1264 3.7E-56 T 29-03-2018 IPR007452 Translocation and assembly module TamB CVS42_RS13950 811604b3f67a3f8ec34b0c215b8f3bda 538 Pfam PF00884 Sulfatase 231 520 8.6E-46 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CVS42_RS13950 811604b3f67a3f8ec34b0c215b8f3bda 538 Gene3D G3DSA:3.40.720.10 193 530 2.8E-20 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CVS42_RS13950 811604b3f67a3f8ec34b0c215b8f3bda 538 SUPERFAMILY SSF53649 274 522 4.14E-19 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CVS42_RS13950 811604b3f67a3f8ec34b0c215b8f3bda 538 Pfam PF08019 Domain of unknown function (DUF1705) 52 201 6.9E-48 T 29-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 Gene3D G3DSA:3.30.70.1430 39 141 2.3E-27 T 29-03-2018 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 SUPERFAMILY SSF82693 39 132 1.5E-26 T 29-03-2018 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 SUPERFAMILY SSF82693 137 183 1.2E-27 T 29-03-2018 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 SUPERFAMILY SSF82693 276 332 1.2E-27 T 29-03-2018 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 Gene3D G3DSA:3.30.70.1440 672 768 7.3E-21 T 29-03-2018 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 Pfam PF00873 AcrB/AcrD/AcrF family 2 1026 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 SUPERFAMILY SSF82693 564 671 9.59E-24 T 29-03-2018 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 Gene3D G3DSA:3.30.2090.10 182 276 2.4E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 SUPERFAMILY SSF82693 808 857 2.62E-22 T 29-03-2018 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 SUPERFAMILY SSF82693 673 721 2.62E-22 T 29-03-2018 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1031 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 Gene3D G3DSA:3.30.70.1430 566 668 6.5E-13 T 29-03-2018 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 SUPERFAMILY SSF82866 831 1027 5.89E-45 T 29-03-2018 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 4.1E-102 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 4.1E-102 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 4.1E-102 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 4.1E-102 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 4.1E-102 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 4.1E-102 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 4.1E-102 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 4.1E-102 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 4.1E-102 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 Gene3D G3DSA:1.20.1640.10 814 1028 6.2E-37 T 29-03-2018 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 Gene3D G3DSA:1.20.1640.10 277 501 4.0E-48 T 29-03-2018 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 SUPERFAMILY SSF82714 722 807 1.24E-22 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 SUPERFAMILY SSF82866 298 499 7.46E-52 T 29-03-2018 CVS42_RS06830 fb6f176626856376753d5d1e24d97148 1036 SUPERFAMILY SSF82714 184 273 1.31E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS12165 58611860d3c4bdda3c75b2f8096dead2 485 Pfam PF13487 HD domain 358 419 4.2E-20 T 29-03-2018 CVS42_RS12165 58611860d3c4bdda3c75b2f8096dead2 485 Gene3D G3DSA:1.10.3210.10 287 466 2.8E-36 T 29-03-2018 CVS42_RS12165 58611860d3c4bdda3c75b2f8096dead2 485 SMART SM00091 163 229 1.9E-5 T 29-03-2018 IPR000014 PAS domain CVS42_RS12165 58611860d3c4bdda3c75b2f8096dead2 485 SMART SM00471 302 437 0.0015 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS12165 58611860d3c4bdda3c75b2f8096dead2 485 SUPERFAMILY SSF109604 284 464 2.6E-29 T 29-03-2018 CVS42_RS12165 58611860d3c4bdda3c75b2f8096dead2 485 SUPERFAMILY SSF55785 153 275 1.06E-17 T 29-03-2018 IPR000014 PAS domain CVS42_RS12165 58611860d3c4bdda3c75b2f8096dead2 485 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 167 282 2.7E-12 T 29-03-2018 IPR000014 PAS domain CVS42_RS12165 58611860d3c4bdda3c75b2f8096dead2 485 Gene3D G3DSA:3.30.450.20 146 282 5.4E-21 T 29-03-2018 CVS42_RS12165 58611860d3c4bdda3c75b2f8096dead2 485 Pfam PF08448 PAS fold 169 278 3.5E-14 T 29-03-2018 IPR013656 PAS fold-4 CVS42_RS15620 bddf07cefe2909c131e14dec024cee34 254 SUPERFAMILY SSF53850 25 246 2.11E-37 T 29-03-2018 CVS42_RS15620 bddf07cefe2909c131e14dec024cee34 254 Gene3D G3DSA:3.40.190.10 21 145 6.2E-14 T 29-03-2018 CVS42_RS15620 bddf07cefe2909c131e14dec024cee34 254 SMART SM00062 24 251 4.3E-7 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS15620 bddf07cefe2909c131e14dec024cee34 254 Gene3D G3DSA:3.40.190.10 146 249 6.0E-8 T 29-03-2018 CVS42_RS15620 bddf07cefe2909c131e14dec024cee34 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 246 2.0E-22 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 SUPERFAMILY SSF81901 233 419 3.14E-30 T 29-03-2018 CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 SMART SM00671 248 283 0.0013 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 SMART SM00671 116 150 7.6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 SMART SM00671 39 70 2.3 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 SMART SM00671 381 416 0.031 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 SMART SM00671 345 380 9.2E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 SMART SM00671 184 219 6.9E-7 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 SMART SM00671 313 344 14.0 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 SMART SM00671 151 183 0.005 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 SMART SM00671 80 115 3.4E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 SUPERFAMILY SSF81901 80 291 5.56E-37 T 29-03-2018 CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 Gene3D G3DSA:2.60.40.1180 135 169 1.0E-5 T 29-03-2018 CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 Gene3D G3DSA:2.60.40.1180 170 227 2.2E-13 T 29-03-2018 CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 Gene3D G3DSA:2.60.40.1180 18 64 0.099 T 29-03-2018 CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 Gene3D G3DSA:2.60.40.1180 228 298 1.0E-7 T 29-03-2018 CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 Gene3D G3DSA:2.60.40.1180 318 455 2.0E-21 T 29-03-2018 CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 Gene3D G3DSA:2.60.40.1180 65 134 3.4E-12 T 29-03-2018 CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 Pfam PF08238 Sel1 repeat 81 115 1.1E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 Pfam PF08238 Sel1 repeat 185 217 2.8E-7 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 Pfam PF08238 Sel1 repeat 346 380 0.0053 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 Pfam PF08238 Sel1 repeat 152 183 0.0089 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 Pfam PF08238 Sel1 repeat 383 415 3.4E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 Pfam PF08238 Sel1 repeat 42 68 0.54 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 Pfam PF08238 Sel1 repeat 248 283 2.3E-4 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS16415 1dbb972c8eb55a43243ade624cfe3ece 456 Pfam PF08238 Sel1 repeat 118 150 0.0039 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS21480 e57550596c6929ff9d3034220b822e6c 303 SUPERFAMILY SSF160240 211 289 9.55E-24 T 29-03-2018 CVS42_RS21480 e57550596c6929ff9d3034220b822e6c 303 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 287 5.8E-66 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CVS42_RS21480 e57550596c6929ff9d3034220b822e6c 303 Pfam PF01545 Cation efflux family 16 207 3.1E-36 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CVS42_RS21480 e57550596c6929ff9d3034220b822e6c 303 Gene3D G3DSA:1.20.1510.10 10 207 3.9E-31 T 29-03-2018 CVS42_RS21480 e57550596c6929ff9d3034220b822e6c 303 Pfam PF16916 Dimerisation domain of Zinc Transporter 211 287 1.9E-25 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CVS42_RS21480 e57550596c6929ff9d3034220b822e6c 303 Gene3D G3DSA:3.30.70.1350 208 291 6.6E-24 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CVS42_RS21480 e57550596c6929ff9d3034220b822e6c 303 SUPERFAMILY SSF161111 9 208 7.59E-47 T 29-03-2018 CVS42_RS18990 9db38e91fa4939f722b4e66fdbc96b6b 443 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 351 360 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS18990 9db38e91fa4939f722b4e66fdbc96b6b 443 SUPERFAMILY SSF52540 97 366 4.94E-91 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS18990 9db38e91fa4939f722b4e66fdbc96b6b 443 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 7 440 2.7E-165 T 29-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS18990 9db38e91fa4939f722b4e66fdbc96b6b 443 Gene3D G3DSA:3.40.50.300 96 367 2.7E-79 T 29-03-2018 CVS42_RS18990 9db38e91fa4939f722b4e66fdbc96b6b 443 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 360 1.3E-69 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS03145 8b00cf748548e17641f2d9497d78087e 247 Pfam PF03749 Sugar fermentation stimulation protein 13 228 1.5E-73 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein CVS42_RS03145 8b00cf748548e17641f2d9497d78087e 247 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 5 227 4.9E-73 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein CVS42_RS03145 8b00cf748548e17641f2d9497d78087e 247 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 238 57.673 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein CVS42_RS00090 2b99fdc0eba2e9ad906a47150ba12e47 137 Pfam PF00011 Hsp20/alpha crystallin family 44 136 3.7E-18 T 29-03-2018 IPR002068 Alpha crystallin/Hsp20 domain CVS42_RS00090 2b99fdc0eba2e9ad906a47150ba12e47 137 Gene3D G3DSA:2.60.40.790 26 136 6.2E-20 T 29-03-2018 IPR008978 HSP20-like chaperone CVS42_RS00090 2b99fdc0eba2e9ad906a47150ba12e47 137 SUPERFAMILY SSF49764 31 136 1.01E-21 T 29-03-2018 IPR008978 HSP20-like chaperone CVS42_RS10055 661b0fd533ff49263a631512989a9106 94 Pfam PF10723 Replication regulatory protein RepB 13 68 9.1E-7 T 29-03-2018 IPR019661 Replication regulatory protein RepA2 GO:0006276 CVS42_RS00575 13a6473a12dd20dce7567b62e99433d6 521 Gene3D G3DSA:3.40.50.300 257 511 6.6E-34 T 29-03-2018 CVS42_RS00575 13a6473a12dd20dce7567b62e99433d6 521 ProSitePatterns PS00211 ABC transporters family signature. 413 427 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS00575 13a6473a12dd20dce7567b62e99433d6 521 SUPERFAMILY SSF52540 7 230 2.93E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00575 13a6473a12dd20dce7567b62e99433d6 521 SUPERFAMILY SSF52540 249 493 2.38E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00575 13a6473a12dd20dce7567b62e99433d6 521 SMART SM00382 33 221 2.1E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS00575 13a6473a12dd20dce7567b62e99433d6 521 SMART SM00382 286 496 0.097 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS00575 13a6473a12dd20dce7567b62e99433d6 521 Pfam PF00005 ABC transporter 27 172 9.8E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS00575 13a6473a12dd20dce7567b62e99433d6 521 Pfam PF00005 ABC transporter 278 440 3.3E-15 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS00575 13a6473a12dd20dce7567b62e99433d6 521 Gene3D G3DSA:3.40.50.300 2 238 4.4E-52 T 29-03-2018 CVS42_RS10910 7d75957c2a2d0f2008eab7b131375f1d 136 Gene3D G3DSA:1.10.1660.10 8 64 5.8E-20 T 29-03-2018 CVS42_RS10910 7d75957c2a2d0f2008eab7b131375f1d 136 SMART SM00422 12 79 1.2E-19 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS10910 7d75957c2a2d0f2008eab7b131375f1d 136 Gene3D G3DSA:1.10.1660.10 65 133 1.5E-14 T 29-03-2018 CVS42_RS10910 7d75957c2a2d0f2008eab7b131375f1d 136 Pfam PF13411 MerR HTH family regulatory protein 12 77 8.5E-17 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS10910 7d75957c2a2d0f2008eab7b131375f1d 136 SUPERFAMILY SSF46955 12 124 3.33E-27 T 29-03-2018 IPR009061 Putative DNA-binding domain CVS42_RS16265 ce5205df785901ac6dc387a8aa577a28 447 Pfam PF11973 NQRA C-terminal domain 262 311 1.4E-21 T 29-03-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 CVS42_RS16265 ce5205df785901ac6dc387a8aa577a28 447 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 257 6.1E-110 T 29-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CVS42_RS16265 ce5205df785901ac6dc387a8aa577a28 447 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 447 45.551 T 29-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CVS42_RS16265 ce5205df785901ac6dc387a8aa577a28 447 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 5.4E-183 T 29-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CVS42_RS04155 3dda69f64125f4ad2779c683f2c1ab38 182 Pfam PF11188 Protein of unknown function (DUF2975) 61 182 1.3E-15 T 29-03-2018 IPR021354 Protein of unknown function DUF2975 CVS42_RS15340 5bc99cfe2fdbdae3e8246c77287021a5 293 SUPERFAMILY SSF46785 4 81 1.48E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS15340 5bc99cfe2fdbdae3e8246c77287021a5 293 Gene3D G3DSA:3.40.190.10 81 292 1.4E-18 T 29-03-2018 CVS42_RS15340 5bc99cfe2fdbdae3e8246c77287021a5 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.8E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS15340 5bc99cfe2fdbdae3e8246c77287021a5 293 Gene3D G3DSA:1.10.10.10 1 80 1.5E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS15340 5bc99cfe2fdbdae3e8246c77287021a5 293 SUPERFAMILY SSF53850 87 286 2.29E-28 T 29-03-2018 CVS42_RS15340 5bc99cfe2fdbdae3e8246c77287021a5 293 Pfam PF03466 LysR substrate binding domain 92 287 3.3E-18 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS20475 7c5a50b2c42cf21a1e9af4d30de015e8 473 SUPERFAMILY SSF53850 35 273 3.85E-27 T 29-03-2018 CVS42_RS20475 7c5a50b2c42cf21a1e9af4d30de015e8 473 Pfam PF01464 Transglycosylase SLT domain 306 415 1.5E-18 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CVS42_RS20475 7c5a50b2c42cf21a1e9af4d30de015e8 473 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 65 271 1.4E-21 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS20475 7c5a50b2c42cf21a1e9af4d30de015e8 473 Gene3D G3DSA:1.10.530.10 285 454 2.4E-32 T 29-03-2018 CVS42_RS20475 7c5a50b2c42cf21a1e9af4d30de015e8 473 Gene3D G3DSA:3.40.190.10 29 217 1.1E-19 T 29-03-2018 CVS42_RS20475 7c5a50b2c42cf21a1e9af4d30de015e8 473 SUPERFAMILY SSF53955 286 455 1.56E-33 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS20475 7c5a50b2c42cf21a1e9af4d30de015e8 473 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 322 350 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CVS42_RS20475 7c5a50b2c42cf21a1e9af4d30de015e8 473 SMART SM00062 59 282 3.0E-4 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS08665 bd61ccdb056cc8216525806384e99ca6 150 Gene3D G3DSA:3.90.79.10 5 148 2.8E-23 T 29-03-2018 CVS42_RS08665 bd61ccdb056cc8216525806384e99ca6 150 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CVS42_RS08665 bd61ccdb056cc8216525806384e99ca6 150 Pfam PF00293 NUDIX domain 10 121 5.3E-19 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CVS42_RS08665 bd61ccdb056cc8216525806384e99ca6 150 SUPERFAMILY SSF55811 9 137 1.06E-26 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CVS42_RS03915 18890c36b96d3058a30bb4d52bde369a 143 SUPERFAMILY SSF52402 4 142 3.35E-39 T 29-03-2018 CVS42_RS03915 18890c36b96d3058a30bb4d52bde369a 143 PIRSF PIRSF006276 3 143 5.0E-24 T 29-03-2018 IPR006015 Universal stress protein A CVS42_RS03915 18890c36b96d3058a30bb4d52bde369a 143 PRINTS PR01438 Universal stress protein signature 4 22 1.6E-19 T 29-03-2018 IPR006015 Universal stress protein A CVS42_RS03915 18890c36b96d3058a30bb4d52bde369a 143 PRINTS PR01438 Universal stress protein signature 102 114 1.6E-19 T 29-03-2018 IPR006015 Universal stress protein A CVS42_RS03915 18890c36b96d3058a30bb4d52bde369a 143 PRINTS PR01438 Universal stress protein signature 120 142 1.6E-19 T 29-03-2018 IPR006015 Universal stress protein A CVS42_RS03915 18890c36b96d3058a30bb4d52bde369a 143 Pfam PF00582 Universal stress protein family 4 142 1.3E-33 T 29-03-2018 IPR006016 UspA GO:0006950 CVS42_RS03915 18890c36b96d3058a30bb4d52bde369a 143 Gene3D G3DSA:3.40.50.620 1 143 1.3E-36 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS09380 9ab9a20ccf0d14465616841e4bc52db9 216 Gene3D G3DSA:1.10.287.1080 124 216 1.8E-21 T 29-03-2018 CVS42_RS09380 9ab9a20ccf0d14465616841e4bc52db9 216 SUPERFAMILY SSF101386 126 215 5.23E-25 T 29-03-2018 CVS42_RS09380 9ab9a20ccf0d14465616841e4bc52db9 216 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 44 117 1.8E-30 T 29-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CVS42_RS09380 9ab9a20ccf0d14465616841e4bc52db9 216 SUPERFAMILY SSF141734 20 124 2.48E-43 T 29-03-2018 CVS42_RS09380 9ab9a20ccf0d14465616841e4bc52db9 216 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 67 116 1.0E-18 T 29-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CVS42_RS09380 9ab9a20ccf0d14465616841e4bc52db9 216 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 127 210 3.1E-31 T 29-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CVS42_RS09380 9ab9a20ccf0d14465616841e4bc52db9 216 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 19 215 37.242 T 29-03-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 CVS42_RS09380 9ab9a20ccf0d14465616841e4bc52db9 216 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 128 213 1.8E-16 T 29-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 CVS42_RS09380 9ab9a20ccf0d14465616841e4bc52db9 216 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 124 210 19.932 T 29-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CVS42_RS01755 4524cda95298000e3cc612d84627c883 464 SUPERFAMILY SSF56176 19 197 4.0E-29 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CVS42_RS01755 4524cda95298000e3cc612d84627c883 464 Gene3D G3DSA:3.30.43.10 11 88 2.0E-5 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CVS42_RS01755 4524cda95298000e3cc612d84627c883 464 PIRSF PIRSF000136 11 463 2.9E-42 T 29-03-2018 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 CVS42_RS01755 4524cda95298000e3cc612d84627c883 464 Pfam PF01565 FAD binding domain 34 168 2.7E-20 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CVS42_RS01755 4524cda95298000e3cc612d84627c883 464 Gene3D G3DSA:3.40.462.10 201 425 8.9E-5 T 29-03-2018 IPR016170 Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain CVS42_RS01755 4524cda95298000e3cc612d84627c883 464 Gene3D G3DSA:3.30.465.10 89 200 1.8E-19 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CVS42_RS01755 4524cda95298000e3cc612d84627c883 464 Pfam PF04030 D-arabinono-1,4-lactone oxidase 191 458 1.7E-41 T 29-03-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 CVS42_RS16610 f28042b11cfb46107f8f7294631772f3 145 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 120 22.956 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CVS42_RS16610 f28042b11cfb46107f8f7294631772f3 145 Pfam PF02033 Ribosome-binding factor A 7 112 4.8E-32 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CVS42_RS16610 f28042b11cfb46107f8f7294631772f3 145 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 100 3.0E-34 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CVS42_RS16610 f28042b11cfb46107f8f7294631772f3 145 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 29-03-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 CVS42_RS16610 f28042b11cfb46107f8f7294631772f3 145 SUPERFAMILY SSF89919 2 107 6.54E-34 T 29-03-2018 IPR023799 Ribosome-binding factor A domain CVS42_RS16610 f28042b11cfb46107f8f7294631772f3 145 Gene3D G3DSA:3.30.300.20 1 100 1.2E-35 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CVS42_RS16610 f28042b11cfb46107f8f7294631772f3 145 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 117 6.5E-40 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 3.8E-93 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 3.8E-93 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 3.8E-93 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 3.8E-93 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 3.8E-93 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 3.8E-93 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 3.8E-93 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 3.8E-93 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 2.7E-256 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 Pfam PF01578 Cytochrome C assembly protein 89 296 9.4E-54 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 638 2.9E-126 T 29-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.2E-54 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 2.2E-54 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 2.2E-54 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 2.2E-54 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 2.2E-54 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 2.2E-54 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05625 7e0a7e226a7bb48f0ec3a21710924a97 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 2.2E-54 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS19630 67517e5d573af1e8a65cb659234bfab5 955 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 953 28.704 T 29-03-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 CVS42_RS19630 67517e5d573af1e8a65cb659234bfab5 955 Gene3D G3DSA:3.40.50.10810 130 379 2.1E-25 T 29-03-2018 CVS42_RS19630 67517e5d573af1e8a65cb659234bfab5 955 SMART SM00490 505 589 4.7E-14 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS19630 67517e5d573af1e8a65cb659234bfab5 955 SUPERFAMILY SSF52540 272 336 3.67E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS19630 67517e5d573af1e8a65cb659234bfab5 955 SUPERFAMILY SSF52540 468 632 3.67E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS19630 67517e5d573af1e8a65cb659234bfab5 955 SMART SM00487 149 341 1.9E-19 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS19630 67517e5d573af1e8a65cb659234bfab5 955 SUPERFAMILY SSF52540 127 345 4.0E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS19630 67517e5d573af1e8a65cb659234bfab5 955 Pfam PF12137 RNA polymerase recycling family C-terminal 593 952 3.4E-142 T 29-03-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 CVS42_RS19630 67517e5d573af1e8a65cb659234bfab5 955 Pfam PF00271 Helicase conserved C-terminal domain 479 589 9.4E-15 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS19630 67517e5d573af1e8a65cb659234bfab5 955 Gene3D G3DSA:3.40.50.300 469 920 3.2E-22 T 29-03-2018 CVS42_RS19630 67517e5d573af1e8a65cb659234bfab5 955 Pfam PF00176 SNF2 family N-terminal domain 173 342 7.1E-16 T 29-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CVS42_RS11385 580864ae959bea7412f6c8785584c716 90 SUPERFAMILY SSF47729 1 90 3.53E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CVS42_RS11385 580864ae959bea7412f6c8785584c716 90 SMART SM00411 1 90 1.6E-44 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS11385 580864ae959bea7412f6c8785584c716 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 9.2E-20 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS11385 580864ae959bea7412f6c8785584c716 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 9.2E-20 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS11385 580864ae959bea7412f6c8785584c716 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 9.2E-20 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS11385 580864ae959bea7412f6c8785584c716 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CVS42_RS11385 580864ae959bea7412f6c8785584c716 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.6E-33 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS11385 580864ae959bea7412f6c8785584c716 90 Gene3D G3DSA:4.10.520.10 1 90 5.4E-34 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CVS42_RS18225 f0523e54c4619b487a20e8e23de32360 173 SUPERFAMILY SSF50346 97 173 1.51E-20 T 29-03-2018 IPR011033 PRC-barrel-like CVS42_RS18225 f0523e54c4619b487a20e8e23de32360 173 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 5 173 2.4E-57 T 29-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CVS42_RS18225 f0523e54c4619b487a20e8e23de32360 173 Pfam PF01782 RimM N-terminal domain 7 87 6.2E-24 T 29-03-2018 IPR002676 RimM protein GO:0006364 CVS42_RS18225 f0523e54c4619b487a20e8e23de32360 173 Gene3D G3DSA:2.40.30.60 4 91 2.3E-25 T 29-03-2018 IPR002676 RimM protein GO:0006364 CVS42_RS18225 f0523e54c4619b487a20e8e23de32360 173 Gene3D G3DSA:2.30.30.240 93 168 3.9E-24 T 29-03-2018 CVS42_RS18225 f0523e54c4619b487a20e8e23de32360 173 Pfam PF05239 PRC-barrel domain 94 168 2.7E-13 T 29-03-2018 IPR027275 PRC-barrel domain CVS42_RS18225 f0523e54c4619b487a20e8e23de32360 173 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 173 24.001 T 29-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CVS42_RS18225 f0523e54c4619b487a20e8e23de32360 173 SUPERFAMILY SSF50447 4 90 1.02E-22 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CVS42_RS03555 bec9b3f533a83a4fa29a68a76ff40a83 302 SUPERFAMILY SSF102522 26 182 5.89E-55 T 29-03-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal CVS42_RS03555 bec9b3f533a83a4fa29a68a76ff40a83 302 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 28 293 1.0E-72 T 29-03-2018 IPR002747 SAM-dependent chlorinase/fluorinase CVS42_RS03555 bec9b3f533a83a4fa29a68a76ff40a83 302 Gene3D G3DSA:2.40.30.90 187 302 1.5E-25 T 29-03-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal CVS42_RS03555 bec9b3f533a83a4fa29a68a76ff40a83 302 Gene3D G3DSA:3.40.50.10790 25 186 3.3E-53 T 29-03-2018 CVS42_RS03555 bec9b3f533a83a4fa29a68a76ff40a83 302 SUPERFAMILY SSF101852 194 297 1.06E-24 T 29-03-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal CVS42_RS03555 bec9b3f533a83a4fa29a68a76ff40a83 302 PIRSF PIRSF006779 22 299 8.3E-96 T 29-03-2018 IPR002747 SAM-dependent chlorinase/fluorinase CVS42_RS19195 65d72b93c865dabfcbf6860984dfa8e7 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain CVS42_RS19195 65d72b93c865dabfcbf6860984dfa8e7 148 Gene3D G3DSA:3.40.930.10 1 148 6.9E-36 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CVS42_RS19195 65d72b93c865dabfcbf6860984dfa8e7 148 SUPERFAMILY SSF55804 1 146 1.96E-39 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CVS42_RS19195 65d72b93c865dabfcbf6860984dfa8e7 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 146 4.0E-50 T 29-03-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 CVS42_RS19195 65d72b93c865dabfcbf6860984dfa8e7 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 146 4.7E-33 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CVS42_RS04460 ee51ff9a6bc0b2938b2c6ffe73aa05bd 466 Gene3D G3DSA:3.30.2290.10 6 222 3.4E-35 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CVS42_RS04460 ee51ff9a6bc0b2938b2c6ffe73aa05bd 466 SUPERFAMILY SSF111283 10 465 4.05E-111 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CVS42_RS04460 ee51ff9a6bc0b2938b2c6ffe73aa05bd 466 PIRSF PIRSF004919 6 466 5.3E-114 T 29-03-2018 IPR025502 TldD CVS42_RS04460 ee51ff9a6bc0b2938b2c6ffe73aa05bd 466 Pfam PF01523 Putative modulator of DNA gyrase 26 319 3.1E-56 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CVS42_RS21990 7d5bb7208535045a4060b620086d6649 250 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 157 171 - T 29-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CVS42_RS21990 7d5bb7208535045a4060b620086d6649 250 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 24 249 1.5E-87 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CVS42_RS21990 7d5bb7208535045a4060b620086d6649 250 Gene3D G3DSA:3.40.50.150 2 249 2.2E-44 T 29-03-2018 CVS42_RS21990 7d5bb7208535045a4060b620086d6649 250 Pfam PF01209 ubiE/COQ5 methyltransferase family 19 249 2.0E-102 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CVS42_RS21990 7d5bb7208535045a4060b620086d6649 250 SUPERFAMILY SSF53335 20 248 1.19E-49 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS21990 7d5bb7208535045a4060b620086d6649 250 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 35 50 - T 29-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CVS42_RS21990 7d5bb7208535045a4060b620086d6649 250 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 15 249 39.118 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CVS42_RS16165 54ce4152870017fcf56a80f7c8f2e2da 451 Pfam PF03641 Possible lysine decarboxylase 187 325 3.1E-32 T 29-03-2018 IPR031100 LOG family CVS42_RS16165 54ce4152870017fcf56a80f7c8f2e2da 451 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 2.8E-58 T 29-03-2018 IPR021826 Domain of unknown function DUF3412 CVS42_RS16165 54ce4152870017fcf56a80f7c8f2e2da 451 Gene3D G3DSA:3.40.50.450 121 449 2.5E-100 T 29-03-2018 CVS42_RS16165 54ce4152870017fcf56a80f7c8f2e2da 451 SUPERFAMILY SSF102405 122 327 1.74E-40 T 29-03-2018 CVS42_RS16165 54ce4152870017fcf56a80f7c8f2e2da 451 Gene3D G3DSA:3.30.1850.10 3 111 1.0E-51 T 29-03-2018 IPR027820 Domain of unknown function DUF4478 CVS42_RS16165 54ce4152870017fcf56a80f7c8f2e2da 451 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 1.3E-50 T 29-03-2018 IPR027820 Domain of unknown function DUF4478 CVS42_RS05660 2f1142265990e5c4f7aac4ebdbfb5cd2 376 SMART SM00558 87 214 3.3E-5 T 29-03-2018 IPR003347 JmjC domain CVS42_RS05660 2f1142265990e5c4f7aac4ebdbfb5cd2 376 SUPERFAMILY SSF51197 5 291 7.69E-75 T 29-03-2018 CVS42_RS05660 2f1142265990e5c4f7aac4ebdbfb5cd2 376 Gene3D G3DSA:2.60.120.650 3 208 4.0E-31 T 29-03-2018 CVS42_RS05660 2f1142265990e5c4f7aac4ebdbfb5cd2 376 Pfam PF08007 Cupin superfamily protein 9 304 1.3E-93 T 29-03-2018 IPR003347 JmjC domain CVS42_RS20375 50575c9204d2e8b459792ced10a8dd84 234 Gene3D G3DSA:1.10.10.10 1 70 7.6E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20375 50575c9204d2e8b459792ced10a8dd84 234 Gene3D G3DSA:3.40.1410.10 71 232 8.7E-40 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CVS42_RS20375 50575c9204d2e8b459792ced10a8dd84 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 6.1E-21 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS20375 50575c9204d2e8b459792ced10a8dd84 234 SMART SM00866 89 226 3.8E-34 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CVS42_RS20375 50575c9204d2e8b459792ced10a8dd84 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 3.1E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS20375 50575c9204d2e8b459792ced10a8dd84 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 3.1E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS20375 50575c9204d2e8b459792ced10a8dd84 234 SUPERFAMILY SSF64288 56 229 1.88E-41 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CVS42_RS20375 50575c9204d2e8b459792ced10a8dd84 234 SUPERFAMILY SSF46785 4 72 4.27E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20375 50575c9204d2e8b459792ced10a8dd84 234 SMART SM00345 9 68 9.1E-21 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS20375 50575c9204d2e8b459792ced10a8dd84 234 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 5 231 1.4E-86 T 29-03-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 CVS42_RS20375 50575c9204d2e8b459792ced10a8dd84 234 Pfam PF07702 UTRA domain 90 226 3.9E-34 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CVS42_RS19690 8f664f5ebf82b80e7c6604ad3185f324 221 Pfam PF09335 SNARE associated Golgi protein 48 172 1.8E-22 T 29-03-2018 IPR032816 SNARE associated Golgi protein CVS42_RS06955 a913367e58bdacb23108cfa978af8e09 401 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 26 124 8.4E-5 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS06955 a913367e58bdacb23108cfa978af8e09 401 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 293 372 1.5E-9 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS06955 a913367e58bdacb23108cfa978af8e09 401 Gene3D G3DSA:1.10.760.10 157 290 2.6E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS06955 a913367e58bdacb23108cfa978af8e09 401 SUPERFAMILY SSF46626 171 277 2.12E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS06955 a913367e58bdacb23108cfa978af8e09 401 Gene3D G3DSA:1.10.760.10 291 401 2.2E-13 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS06955 a913367e58bdacb23108cfa978af8e09 401 Gene3D G3DSA:1.10.760.10 4 139 1.3E-17 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS06955 a913367e58bdacb23108cfa978af8e09 401 SUPERFAMILY SSF46626 293 395 1.89E-17 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS06955 a913367e58bdacb23108cfa978af8e09 401 SUPERFAMILY SSF46626 13 148 5.49E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS06955 a913367e58bdacb23108cfa978af8e09 401 PIRSF PIRSF000018 1 400 2.0E-129 T 29-03-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 CVS42_RS09415 d569c8f8b4281fd8651592b174ad6d01 298 Gene3D G3DSA:3.40.190.10 128 222 3.4E-23 T 29-03-2018 CVS42_RS09415 d569c8f8b4281fd8651592b174ad6d01 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.527 T 29-03-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 CVS42_RS09415 d569c8f8b4281fd8651592b174ad6d01 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 201 297 2.5E-30 T 29-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CVS42_RS09415 d569c8f8b4281fd8651592b174ad6d01 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 7.6E-49 T 29-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CVS42_RS09415 d569c8f8b4281fd8651592b174ad6d01 298 Gene3D G3DSA:3.30.70.120 226 297 2.6E-24 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CVS42_RS09415 d569c8f8b4281fd8651592b174ad6d01 298 SUPERFAMILY SSF54913 225 297 6.34E-22 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CVS42_RS09415 d569c8f8b4281fd8651592b174ad6d01 298 Gene3D G3DSA:3.40.190.10 1 127 6.5E-38 T 29-03-2018 CVS42_RS09415 d569c8f8b4281fd8651592b174ad6d01 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 195 7.1E-57 T 29-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CVS42_RS09415 d569c8f8b4281fd8651592b174ad6d01 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 29-03-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 CVS42_RS09415 d569c8f8b4281fd8651592b174ad6d01 298 Pfam PF08029 HisG, C-terminal domain 222 295 9.4E-25 T 29-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CVS42_RS09415 d569c8f8b4281fd8651592b174ad6d01 298 SUPERFAMILY SSF53850 5 222 1.23E-68 T 29-03-2018 CVS42_RS15495 0acaf18e9c2c3e24a2956141c3c93889 308 SUPERFAMILY SSF56801 104 273 2.88E-10 T 29-03-2018 CVS42_RS15495 0acaf18e9c2c3e24a2956141c3c93889 308 Gene3D G3DSA:3.40.50.980 106 269 1.9E-4 T 29-03-2018 CVS42_RS04435 d20e85755cd8d39bec8b4fa1b0cda922 345 Gene3D G3DSA:1.10.8.60 142 218 6.3E-17 T 29-03-2018 CVS42_RS04435 d20e85755cd8d39bec8b4fa1b0cda922 345 Gene3D G3DSA:1.20.272.10 219 330 6.8E-22 T 29-03-2018 CVS42_RS04435 d20e85755cd8d39bec8b4fa1b0cda922 345 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 212 328 4.7E-17 T 29-03-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS04435 d20e85755cd8d39bec8b4fa1b0cda922 345 Gene3D G3DSA:3.40.50.300 1 138 2.8E-20 T 29-03-2018 CVS42_RS04435 d20e85755cd8d39bec8b4fa1b0cda922 345 Pfam PF06144 DNA polymerase III, delta subunit 20 188 4.8E-35 T 29-03-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 CVS42_RS04435 d20e85755cd8d39bec8b4fa1b0cda922 345 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 328 9.3E-86 T 29-03-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 CVS42_RS04435 d20e85755cd8d39bec8b4fa1b0cda922 345 SUPERFAMILY SSF52540 1 208 6.9E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS04435 d20e85755cd8d39bec8b4fa1b0cda922 345 SUPERFAMILY SSF48019 210 328 3.57E-24 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CVS42_RS19275 c1610cdd0d4bae8b27b49e9dbf1e185e 181 Gene3D G3DSA:1.10.60.30 33 104 3.0E-23 T 29-03-2018 CVS42_RS19275 c1610cdd0d4bae8b27b49e9dbf1e185e 181 SUPERFAMILY SSF158710 32 177 7.98E-50 T 29-03-2018 IPR023153 PSPTO4464-like domain CVS42_RS19275 c1610cdd0d4bae8b27b49e9dbf1e185e 181 Pfam PF04751 Protein of unknown function (DUF615) 22 174 7.7E-55 T 29-03-2018 IPR006839 Ribosome-associated, YjgA CVS42_RS19275 c1610cdd0d4bae8b27b49e9dbf1e185e 181 PIRSF PIRSF016183 5 180 1.1E-61 T 29-03-2018 IPR006839 Ribosome-associated, YjgA CVS42_RS19275 c1610cdd0d4bae8b27b49e9dbf1e185e 181 Gene3D G3DSA:1.10.60.30 109 179 1.7E-27 T 29-03-2018 CVS42_RS19275 c1610cdd0d4bae8b27b49e9dbf1e185e 181 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 178 22.273 T 29-03-2018 IPR006839 Ribosome-associated, YjgA CVS42_RS05085 c95a6d8e9ea24fb0085647d976e2e462 335 Pfam PF08496 Peptidase family S49 N-terminal 3 146 5.7E-52 T 29-03-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 CVS42_RS05085 c95a6d8e9ea24fb0085647d976e2e462 335 Gene3D G3DSA:3.90.226.10 43 296 2.0E-27 T 29-03-2018 CVS42_RS05085 c95a6d8e9ea24fb0085647d976e2e462 335 SUPERFAMILY SSF52096 91 197 3.83E-27 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS05085 c95a6d8e9ea24fb0085647d976e2e462 335 SUPERFAMILY SSF52096 228 287 3.83E-27 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS05085 c95a6d8e9ea24fb0085647d976e2e462 335 Pfam PF01343 Peptidase family S49 149 296 1.7E-42 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CVS42_RS21350 ecf05a1b83ca3a5cdad34addef6ca423 301 Pfam PF03466 LysR substrate binding domain 89 288 6.5E-48 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS21350 ecf05a1b83ca3a5cdad34addef6ca423 301 Gene3D G3DSA:1.10.10.10 5 79 1.5E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS21350 ecf05a1b83ca3a5cdad34addef6ca423 301 SUPERFAMILY SSF46785 4 85 6.53E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS21350 ecf05a1b83ca3a5cdad34addef6ca423 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 3.9E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS21350 ecf05a1b83ca3a5cdad34addef6ca423 301 SUPERFAMILY SSF53850 90 291 3.98E-48 T 29-03-2018 CVS42_RS21350 ecf05a1b83ca3a5cdad34addef6ca423 301 Gene3D G3DSA:3.40.190.10 177 259 5.5E-27 T 29-03-2018 CVS42_RS21350 ecf05a1b83ca3a5cdad34addef6ca423 301 Gene3D G3DSA:3.40.190.10 80 176 2.0E-15 T 29-03-2018 CVS42_RS10310 ac0011f01d1decbfffffe4257550f791 716 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 204 4.9E-40 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CVS42_RS10310 ac0011f01d1decbfffffe4257550f791 716 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 492 517 - T 29-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CVS42_RS10310 ac0011f01d1decbfffffe4257550f791 716 Gene3D G3DSA:1.10.1040.10 494 594 5.1E-23 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CVS42_RS10310 ac0011f01d1decbfffffe4257550f791 716 Gene3D G3DSA:1.10.1040.10 623 715 1.4E-19 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CVS42_RS10310 ac0011f01d1decbfffffe4257550f791 716 Gene3D G3DSA:3.90.226.10 1 205 1.2E-58 T 29-03-2018 CVS42_RS10310 ac0011f01d1decbfffffe4257550f791 716 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 716 0.0 T 29-03-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CVS42_RS10310 ac0011f01d1decbfffffe4257550f791 716 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 314 492 2.0E-52 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CVS42_RS10310 ac0011f01d1decbfffffe4257550f791 716 SUPERFAMILY SSF52096 2 301 7.47E-68 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS10310 ac0011f01d1decbfffffe4257550f791 716 Gene3D G3DSA:3.40.50.720 254 493 8.9E-56 T 29-03-2018 CVS42_RS10310 ac0011f01d1decbfffffe4257550f791 716 SUPERFAMILY SSF51735 311 493 4.7E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS10310 ac0011f01d1decbfffffe4257550f791 716 SUPERFAMILY SSF48179 624 716 2.13E-25 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CVS42_RS10310 ac0011f01d1decbfffffe4257550f791 716 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 495 589 8.4E-27 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CVS42_RS10310 ac0011f01d1decbfffffe4257550f791 716 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 712 9.7E-6 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CVS42_RS10310 ac0011f01d1decbfffffe4257550f791 716 SUPERFAMILY SSF48179 495 592 1.02E-26 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CVS42_RS17520 b0d28a4e73d92557504d2685bde2eb0b 164 Gene3D G3DSA:3.30.70.260 1 87 2.0E-24 T 29-03-2018 CVS42_RS17520 b0d28a4e73d92557504d2685bde2eb0b 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 3.0E-32 T 29-03-2018 CVS42_RS17520 b0d28a4e73d92557504d2685bde2eb0b 164 Pfam PF13710 ACT domain 12 73 7.4E-16 T 29-03-2018 CVS42_RS17520 b0d28a4e73d92557504d2685bde2eb0b 164 SUPERFAMILY SSF55021 79 162 1.64E-24 T 29-03-2018 CVS42_RS17520 b0d28a4e73d92557504d2685bde2eb0b 164 Gene3D G3DSA:3.30.70.1150 88 161 1.6E-23 T 29-03-2018 CVS42_RS17520 b0d28a4e73d92557504d2685bde2eb0b 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 1.5E-64 T 29-03-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CVS42_RS17520 b0d28a4e73d92557504d2685bde2eb0b 164 SUPERFAMILY SSF55021 2 76 1.04E-23 T 29-03-2018 CVS42_RS17520 b0d28a4e73d92557504d2685bde2eb0b 164 Pfam PF10369 Small subunit of acetolactate synthase 84 157 2.2E-23 T 29-03-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CVS42_RS14805 7b45a432bbebe21b6f0e60500b28f91d 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 232 4.7E-17 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS14805 7b45a432bbebe21b6f0e60500b28f91d 239 SUPERFAMILY SSF46894 138 233 2.38E-20 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS14805 7b45a432bbebe21b6f0e60500b28f91d 239 Pfam PF00072 Response regulator receiver domain 6 113 8.9E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS14805 7b45a432bbebe21b6f0e60500b28f91d 239 Gene3D G3DSA:3.40.50.2300 1 123 2.3E-31 T 29-03-2018 CVS42_RS14805 7b45a432bbebe21b6f0e60500b28f91d 239 SMART SM00448 4 114 1.1E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS14805 7b45a432bbebe21b6f0e60500b28f91d 239 Gene3D G3DSA:1.10.10.10 124 237 4.7E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS14805 7b45a432bbebe21b6f0e60500b28f91d 239 SMART SM00862 156 232 1.0E-13 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS14805 7b45a432bbebe21b6f0e60500b28f91d 239 SUPERFAMILY SSF52172 2 123 1.42E-35 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS18790 dacf8f6ae9faa2f6a95ace7cb6272d7f 484 SUPERFAMILY SSF51984 14 106 6.54E-30 T 29-03-2018 CVS42_RS18790 dacf8f6ae9faa2f6a95ace7cb6272d7f 484 Gene3D G3DSA:3.40.50.720 2 107 8.8E-20 T 29-03-2018 CVS42_RS18790 dacf8f6ae9faa2f6a95ace7cb6272d7f 484 SUPERFAMILY SSF53623 105 322 1.26E-73 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS18790 dacf8f6ae9faa2f6a95ace7cb6272d7f 484 Gene3D G3DSA:3.40.1190.10 108 324 2.4E-52 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS18790 dacf8f6ae9faa2f6a95ace7cb6272d7f 484 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 476 43.49 T 29-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS18790 dacf8f6ae9faa2f6a95ace7cb6272d7f 484 Pfam PF02875 Mur ligase family, glutamate ligase domain 324 414 8.2E-21 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CVS42_RS18790 dacf8f6ae9faa2f6a95ace7cb6272d7f 484 SUPERFAMILY SSF53244 323 470 2.56E-48 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CVS42_RS18790 dacf8f6ae9faa2f6a95ace7cb6272d7f 484 Pfam PF01225 Mur ligase family, catalytic domain 21 118 5.8E-29 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CVS42_RS18790 dacf8f6ae9faa2f6a95ace7cb6272d7f 484 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 469 1.3E-177 T 29-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS18790 dacf8f6ae9faa2f6a95ace7cb6272d7f 484 Gene3D G3DSA:3.90.190.20 325 475 4.2E-36 T 29-03-2018 CVS42_RS18790 dacf8f6ae9faa2f6a95ace7cb6272d7f 484 Pfam PF08245 Mur ligase middle domain 124 304 2.6E-28 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CVS42_RS19730 c9f598b0f4b75d4f0983d2f657b2b67a 62 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CVS42_RS19730 c9f598b0f4b75d4f0983d2f657b2b67a 62 SUPERFAMILY SSF117130 1 54 3.92E-21 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CVS42_RS19730 c9f598b0f4b75d4f0983d2f657b2b67a 62 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 55 3.1E-30 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CVS42_RS19730 c9f598b0f4b75d4f0983d2f657b2b67a 62 Pfam PF02599 Global regulator protein family 1 52 2.6E-27 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CVS42_RS19730 c9f598b0f4b75d4f0983d2f657b2b67a 62 Hamap MF_00167 Carbon storage regulator [csrA]. 1 62 20.35 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CVS42_RS01760 5e54c36f51a9467d17dc981f29b1801f 372 Gene3D G3DSA:3.30.1220.10 243 353 1.1E-17 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CVS42_RS01760 5e54c36f51a9467d17dc981f29b1801f 372 SMART SM00833 258 352 5.4E-26 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CVS42_RS01760 5e54c36f51a9467d17dc981f29b1801f 372 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 258 351 9.1E-19 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CVS42_RS01760 5e54c36f51a9467d17dc981f29b1801f 372 SUPERFAMILY SSF52540 5 205 1.21E-30 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS01760 5e54c36f51a9467d17dc981f29b1801f 372 SUPERFAMILY SSF90002 258 351 6.15E-19 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CVS42_RS01760 5e54c36f51a9467d17dc981f29b1801f 372 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 187 2.5E-46 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CVS42_RS01760 5e54c36f51a9467d17dc981f29b1801f 372 Gene3D G3DSA:3.40.50.300 3 207 2.2E-39 T 29-03-2018 CVS42_RS12000 8db2ad5891cd76fc0bd21d37363e6474 265 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 59 153 2.0E-17 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CVS42_RS12000 8db2ad5891cd76fc0bd21d37363e6474 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 261 8.5E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS12000 8db2ad5891cd76fc0bd21d37363e6474 265 Gene3D G3DSA:1.10.3720.10 5 264 2.1E-39 T 29-03-2018 CVS42_RS12000 8db2ad5891cd76fc0bd21d37363e6474 265 SUPERFAMILY SSF161098 59 245 8.5E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS05895 9b3deedccbe289ea0eebd877e21b5a96 434 SUPERFAMILY SSF49879 10 94 1.17E-7 T 29-03-2018 IPR008984 SMAD/FHA domain GO:0005515 CVS42_RS05895 9b3deedccbe289ea0eebd877e21b5a96 434 Gene3D G3DSA:2.60.200.20 1 114 3.7E-6 T 29-03-2018 CVS42_RS05895 9b3deedccbe289ea0eebd877e21b5a96 434 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 165 417 3.3E-99 T 29-03-2018 IPR032034 Yop protein translocation protein D, periplasmic domain CVS42_RS05895 9b3deedccbe289ea0eebd877e21b5a96 434 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 6 98 1.1E-18 T 29-03-2018 IPR032030 YscD, cytoplasmic domain CVS42_RS05895 9b3deedccbe289ea0eebd877e21b5a96 434 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 3 417 2.4E-84 T 29-03-2018 IPR012843 Type III secretion system YscD/HrpQ CVS42_RS09745 335ee28fae63e62197fe4e74e48cb3e1 302 SUPERFAMILY SSF52402 15 233 1.11E-53 T 29-03-2018 CVS42_RS09745 335ee28fae63e62197fe4e74e48cb3e1 302 Gene3D G3DSA:3.40.50.620 6 233 3.0E-39 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS09745 335ee28fae63e62197fe4e74e48cb3e1 302 Pfam PF01171 PP-loop family 39 201 3.7E-14 T 29-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CVS42_RS09745 335ee28fae63e62197fe4e74e48cb3e1 302 PIRSF PIRSF004976 2 269 1.9E-73 T 29-03-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 CVS42_RS09745 335ee28fae63e62197fe4e74e48cb3e1 302 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 8 267 58.498 T 29-03-2018 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 CVS42_RS01055 824465732b9dc3e6ee6e4652e9c1518f 240 Pfam PF00072 Response regulator receiver domain 8 118 1.1E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS01055 824465732b9dc3e6ee6e4652e9c1518f 240 Gene3D G3DSA:1.10.10.10 126 239 4.3E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS01055 824465732b9dc3e6ee6e4652e9c1518f 240 SUPERFAMILY SSF52172 3 127 3.98E-43 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS01055 824465732b9dc3e6ee6e4652e9c1518f 240 SUPERFAMILY SSF46894 134 235 5.67E-27 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS01055 824465732b9dc3e6ee6e4652e9c1518f 240 Gene3D G3DSA:3.40.50.2300 1 125 5.7E-39 T 29-03-2018 CVS42_RS01055 824465732b9dc3e6ee6e4652e9c1518f 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 1.8E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS01055 824465732b9dc3e6ee6e4652e9c1518f 240 SMART SM00448 6 117 1.7E-44 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS01055 824465732b9dc3e6ee6e4652e9c1518f 240 SMART SM00862 157 233 2.5E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS17005 74b75c17946d410091e3cf91e1f79699 186 PIRSF PIRSF011443 1 174 5.3E-52 T 29-03-2018 IPR026267 Inner membrane protein YgjV CVS42_RS17005 74b75c17946d410091e3cf91e1f79699 186 Pfam PF10688 Bacterial inner membrane protein 6 160 1.9E-44 T 29-03-2018 IPR019629 Uncharacterised protein family HI1736/YgjV CVS42_RS14905 477241f3b380c235e23fdf670b581b6b 449 Pfam PF13520 Amino acid permease 15 392 5.6E-37 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS14905 477241f3b380c235e23fdf670b581b6b 449 PIRSF PIRSF006060 1 448 2.9E-66 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS01690 1026eff9aaf00b2eba0c91ad4e6df5f3 222 SUPERFAMILY SSF47413 3 68 3.22E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS01690 1026eff9aaf00b2eba0c91ad4e6df5f3 222 Gene3D G3DSA:1.10.10.10 29 76 3.4E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS01690 1026eff9aaf00b2eba0c91ad4e6df5f3 222 Pfam PF00717 Peptidase S24-like 133 182 7.6E-13 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CVS42_RS01690 1026eff9aaf00b2eba0c91ad4e6df5f3 222 Gene3D G3DSA:2.10.109.10 93 218 6.3E-18 T 29-03-2018 CVS42_RS01690 1026eff9aaf00b2eba0c91ad4e6df5f3 222 Gene3D G3DSA:1.10.10.60 1 28 3.6E-14 T 29-03-2018 CVS42_RS01690 1026eff9aaf00b2eba0c91ad4e6df5f3 222 Pfam PF01381 Helix-turn-helix 7 59 2.0E-16 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS01690 1026eff9aaf00b2eba0c91ad4e6df5f3 222 SUPERFAMILY SSF51306 88 215 1.7E-21 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CVS42_RS01690 1026eff9aaf00b2eba0c91ad4e6df5f3 222 SMART SM00530 6 61 2.2E-15 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS19240 beec0b23df87ee7495c159254abcabd1 259 Pfam PF02405 Permease MlaE 44 255 6.5E-77 T 29-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CVS42_RS19240 beec0b23df87ee7495c159254abcabd1 259 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 8.0E-101 T 29-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CVS42_RS19745 b08b13baa488a9e8ac8334029ba8afa5 169 Gene3D G3DSA:1.10.10.10 22 69 2.7E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS19745 b08b13baa488a9e8ac8334029ba8afa5 169 Gene3D G3DSA:1.10.10.10 116 166 6.0E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS19745 b08b13baa488a9e8ac8334029ba8afa5 169 Gene3D G3DSA:1.10.10.10 71 114 1.5E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS19745 b08b13baa488a9e8ac8334029ba8afa5 169 Pfam PF02631 RecX family 46 163 1.3E-24 T 29-03-2018 IPR003783 Regulatory protein RecX GO:0006282 CVS42_RS19745 b08b13baa488a9e8ac8334029ba8afa5 169 Hamap MF_01114 Regulatory protein RecX [recX]. 3 168 13.795 T 29-03-2018 IPR003783 Regulatory protein RecX GO:0006282 CVS42_RS16920 888ed230dcf85aafe94fe545c980a374 211 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 135 209 1.5E-15 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CVS42_RS16920 888ed230dcf85aafe94fe545c980a374 211 Gene3D G3DSA:3.30.2420.10 135 211 1.2E-14 T 29-03-2018 CVS42_RS16920 888ed230dcf85aafe94fe545c980a374 211 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 143 210 4.2E-12 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CVS42_RS16920 888ed230dcf85aafe94fe545c980a374 211 SUPERFAMILY SSF74653 124 208 7.19E-16 T 29-03-2018 CVS42_RS04080 12ed337a56a52bc698c10edb39be1c4b 283 Gene3D G3DSA:3.40.50.1980 29 130 1.3E-16 T 29-03-2018 CVS42_RS04080 12ed337a56a52bc698c10edb39be1c4b 283 SUPERFAMILY SSF53807 29 279 4.71E-44 T 29-03-2018 CVS42_RS04080 12ed337a56a52bc698c10edb39be1c4b 283 Pfam PF01497 Periplasmic binding protein 31 255 2.5E-27 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CVS42_RS04080 12ed337a56a52bc698c10edb39be1c4b 283 Gene3D G3DSA:3.40.50.1980 131 281 1.6E-27 T 29-03-2018 CVS42_RS20425 c21b6fca347740917828f96debd1756e 618 Pfam PF02254 TrkA-N domain 410 522 1.4E-22 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CVS42_RS20425 c21b6fca347740917828f96debd1756e 618 Gene3D G3DSA:1.20.91.10 233 314 7.9E-12 T 29-03-2018 CVS42_RS20425 c21b6fca347740917828f96debd1756e 618 SUPERFAMILY SSF51735 409 532 4.55E-29 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS20425 c21b6fca347740917828f96debd1756e 618 Pfam PF00999 Sodium/hydrogen exchanger family 11 377 8.2E-66 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CVS42_RS20425 c21b6fca347740917828f96debd1756e 618 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 288 3.2E-81 T 29-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CVS42_RS20425 c21b6fca347740917828f96debd1756e 618 Gene3D G3DSA:3.40.50.720 400 522 1.1E-17 T 29-03-2018 CVS42_RS09130 b9006cc8146af1d539f21cec32fcf917 88 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 20.517 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CVS42_RS09130 b9006cc8146af1d539f21cec32fcf917 88 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 82 3.5E-32 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CVS42_RS09130 b9006cc8146af1d539f21cec32fcf917 88 Gene3D G3DSA:3.30.1070.10 1 84 9.3E-29 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CVS42_RS09130 b9006cc8146af1d539f21cec32fcf917 88 Pfam PF03776 Septum formation topological specificity factor MinE 15 82 3.2E-26 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CVS42_RS09130 b9006cc8146af1d539f21cec32fcf917 88 SUPERFAMILY SSF55229 34 84 1.57E-16 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CVS42_RS10260 f0096619ec78ccd9e37a9517d1ecda1e 508 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 489 2.4E-50 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CVS42_RS10260 f0096619ec78ccd9e37a9517d1ecda1e 508 Gene3D G3DSA:3.20.130.10 315 489 2.9E-67 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CVS42_RS10260 f0096619ec78ccd9e37a9517d1ecda1e 508 PIRSF PIRSF001394 1 506 8.3E-218 T 29-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 CVS42_RS10260 f0096619ec78ccd9e37a9517d1ecda1e 508 Pfam PF05683 Fumarase C-terminus 288 490 1.0E-83 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CVS42_RS10260 f0096619ec78ccd9e37a9517d1ecda1e 508 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 11 282 2.6E-64 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CVS42_RS10260 f0096619ec78ccd9e37a9517d1ecda1e 508 Pfam PF05681 Fumarate hydratase (Fumerase) 11 284 3.4E-99 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CVS42_RS10260 f0096619ec78ccd9e37a9517d1ecda1e 508 SUPERFAMILY SSF117457 315 489 8.11E-64 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CVS42_RS15725 6a8cab6a057ee912f6699ec9adadab0c 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 81 1.2E-8 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CVS42_RS15725 6a8cab6a057ee912f6699ec9adadab0c 208 SUPERFAMILY SSF47616 82 193 7.94E-7 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CVS42_RS15725 6a8cab6a057ee912f6699ec9adadab0c 208 SUPERFAMILY SSF52833 1 80 1.84E-13 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS15725 6a8cab6a057ee912f6699ec9adadab0c 208 Gene3D G3DSA:3.40.30.10 2 95 1.2E-16 T 29-03-2018 CVS42_RS15725 6a8cab6a057ee912f6699ec9adadab0c 208 Gene3D G3DSA:1.20.1050.10 96 185 4.5E-10 T 29-03-2018 CVS42_RS02555 9a32f33d5a047755133c9cccbe192e21 385 Gene3D G3DSA:1.20.1250.20 1 190 2.2E-32 T 29-03-2018 CVS42_RS02555 9a32f33d5a047755133c9cccbe192e21 385 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 2 349 1.1E-76 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CVS42_RS02555 9a32f33d5a047755133c9cccbe192e21 385 Pfam PF07690 Major Facilitator Superfamily 6 342 6.2E-45 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS02555 9a32f33d5a047755133c9cccbe192e21 385 SUPERFAMILY SSF103473 2 358 2.62E-58 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS02555 9a32f33d5a047755133c9cccbe192e21 385 Gene3D G3DSA:1.20.1250.20 191 381 1.4E-12 T 29-03-2018 CVS42_RS02555 9a32f33d5a047755133c9cccbe192e21 385 ProSitePatterns PS00216 Sugar transport proteins signature 1. 55 71 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CVS42_RS15575 3af4009eb2276befb6ee55789153ebf9 299 SUPERFAMILY SSF103481 190 290 1.31E-14 T 29-03-2018 CVS42_RS15575 3af4009eb2276befb6ee55789153ebf9 299 SUPERFAMILY SSF103481 39 141 3.14E-16 T 29-03-2018 CVS42_RS15575 3af4009eb2276befb6ee55789153ebf9 299 Pfam PF00892 EamA-like transporter family 6 139 3.4E-27 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS15575 3af4009eb2276befb6ee55789153ebf9 299 Pfam PF00892 EamA-like transporter family 155 283 3.9E-17 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS19265 6bebfcbf06d01cd059ed089d5bec68db 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 44.267 T 29-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS19265 6bebfcbf06d01cd059ed089d5bec68db 418 SUPERFAMILY SSF55205 1 417 2.62E-144 T 29-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CVS42_RS19265 6bebfcbf06d01cd059ed089d5bec68db 418 Gene3D G3DSA:3.65.10.10 220 418 8.0E-45 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CVS42_RS19265 6bebfcbf06d01cd059ed089d5bec68db 418 Gene3D G3DSA:3.65.10.10 21 219 4.2E-52 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CVS42_RS19265 6bebfcbf06d01cd059ed089d5bec68db 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 1.9E-180 T 29-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS19265 6bebfcbf06d01cd059ed089d5bec68db 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 406 1.4E-115 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CVS42_RS20180 f8cdfdc4094ad0cf16a7377f1166713c 224 Gene3D G3DSA:3.90.1490.10 148 223 6.8E-15 T 29-03-2018 CVS42_RS20180 f8cdfdc4094ad0cf16a7377f1166713c 224 SUPERFAMILY SSF52402 1 220 5.98E-62 T 29-03-2018 CVS42_RS20180 f8cdfdc4094ad0cf16a7377f1166713c 224 Gene3D G3DSA:3.40.50.620 1 146 7.8E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS20180 f8cdfdc4094ad0cf16a7377f1166713c 224 Pfam PF01902 Diphthamide synthase 5 205 2.8E-26 T 29-03-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 CVS42_RS04325 b5cace61be0a4c10abd043db27967301 574 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 13 573 59.038 T 29-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS04325 b5cace61be0a4c10abd043db27967301 574 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 355 416 1.7E-12 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS04325 b5cace61be0a4c10abd043db27967301 574 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 82 141 2.0E-14 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS04325 b5cace61be0a4c10abd043db27967301 574 Gene3D G3DSA:3.30.413.10 81 144 0.081 T 29-03-2018 CVS42_RS04325 b5cace61be0a4c10abd043db27967301 574 Gene3D G3DSA:3.30.413.10 428 563 3.1E-26 T 29-03-2018 CVS42_RS04325 b5cace61be0a4c10abd043db27967301 574 SUPERFAMILY SSF56014 432 562 2.75E-34 T 29-03-2018 CVS42_RS04325 b5cace61be0a4c10abd043db27967301 574 SUPERFAMILY SSF55124 348 424 1.46E-20 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS04325 b5cace61be0a4c10abd043db27967301 574 SUPERFAMILY SSF55124 18 148 1.96E-26 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS04325 b5cace61be0a4c10abd043db27967301 574 SUPERFAMILY SSF56014 152 346 1.2E-56 T 29-03-2018 CVS42_RS04325 b5cace61be0a4c10abd043db27967301 574 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 22 561 2.7E-280 T 29-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS04325 b5cace61be0a4c10abd043db27967301 574 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 435 560 0.012 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS04325 b5cace61be0a4c10abd043db27967301 574 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 176 332 9.6E-45 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS04325 b5cace61be0a4c10abd043db27967301 574 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 480 496 - T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS04325 b5cace61be0a4c10abd043db27967301 574 Gene3D G3DSA:3.30.413.10 145 347 9.7E-48 T 29-03-2018 CVS42_RS04325 b5cace61be0a4c10abd043db27967301 574 PRINTS PR00397 Sirohaem Fe-binding site signature 480 498 1.2E-8 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS04325 b5cace61be0a4c10abd043db27967301 574 PRINTS PR00397 Sirohaem Fe-binding site signature 432 450 1.2E-8 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CVS42_RS03110 e77bd9a0d1240d04616cb7707225b8b7 293 Pfam PF03466 LysR substrate binding domain 100 285 2.6E-22 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS03110 e77bd9a0d1240d04616cb7707225b8b7 293 SUPERFAMILY SSF53850 93 290 7.48E-27 T 29-03-2018 CVS42_RS03110 e77bd9a0d1240d04616cb7707225b8b7 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 7.3E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS03110 e77bd9a0d1240d04616cb7707225b8b7 293 Gene3D G3DSA:3.40.190.10 89 178 1.3E-11 T 29-03-2018 CVS42_RS03110 e77bd9a0d1240d04616cb7707225b8b7 293 Gene3D G3DSA:3.40.190.10 179 256 2.0E-9 T 29-03-2018 CVS42_RS03110 e77bd9a0d1240d04616cb7707225b8b7 293 SUPERFAMILY SSF46785 1 86 4.08E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS03110 e77bd9a0d1240d04616cb7707225b8b7 293 Gene3D G3DSA:1.10.10.10 1 83 9.8E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS12790 821e35e50fe47b80d8d45d9b86b6ba67 277 SMART SM00062 56 277 7.4E-8 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS12790 821e35e50fe47b80d8d45d9b86b6ba67 277 SUPERFAMILY SSF53850 57 275 2.46E-37 T 29-03-2018 CVS42_RS12790 821e35e50fe47b80d8d45d9b86b6ba67 277 Gene3D G3DSA:3.40.190.10 48 212 2.5E-27 T 29-03-2018 CVS42_RS12790 821e35e50fe47b80d8d45d9b86b6ba67 277 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 57 275 1.2E-25 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS06755 4c3301bc0af825ecb71bdfefcde7ba3a 154 SUPERFAMILY SSF53098 4 141 1.9E-57 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS06755 4c3301bc0af825ecb71bdfefcde7ba3a 154 Pfam PF00075 RNase H 4 141 4.8E-51 T 29-03-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CVS42_RS06755 4c3301bc0af825ecb71bdfefcde7ba3a 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 35.632 T 29-03-2018 IPR022892 Ribonuclease HI GO:0004523 CVS42_RS06755 4c3301bc0af825ecb71bdfefcde7ba3a 154 Gene3D G3DSA:3.30.420.10 1 151 2.0E-51 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS11470 eb31914af53d49149a9d497ee895a30f 155 SUPERFAMILY SSF53254 1 143 7.72E-22 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CVS42_RS11470 eb31914af53d49149a9d497ee895a30f 155 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 150 4.1E-37 T 29-03-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 CVS42_RS11470 eb31914af53d49149a9d497ee895a30f 155 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 70 2.4E-10 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CVS42_RS11470 eb31914af53d49149a9d497ee895a30f 155 Gene3D G3DSA:3.40.50.1240 1 153 6.1E-23 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CVS42_RS11470 eb31914af53d49149a9d497ee895a30f 155 SMART SM00855 2 115 5.5E-6 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CVS42_RS00435 b9b5445eb72e241310791e6a901fc838 137 Gene3D G3DSA:1.10.760.10 36 134 8.6E-14 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS00435 b9b5445eb72e241310791e6a901fc838 137 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 56 133 2.1E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS00435 b9b5445eb72e241310791e6a901fc838 137 PRINTS PR00607 Class IE cytochrome C signature 123 134 2.8E-13 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CVS42_RS00435 b9b5445eb72e241310791e6a901fc838 137 PRINTS PR00607 Class IE cytochrome C signature 76 86 2.8E-13 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CVS42_RS00435 b9b5445eb72e241310791e6a901fc838 137 PRINTS PR00607 Class IE cytochrome C signature 65 76 2.8E-13 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CVS42_RS00435 b9b5445eb72e241310791e6a901fc838 137 PRINTS PR00607 Class IE cytochrome C signature 108 120 2.8E-13 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CVS42_RS00435 b9b5445eb72e241310791e6a901fc838 137 SUPERFAMILY SSF46626 40 133 2.87E-19 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS00275 26932cb347fc025633f7313a52490817 237 Gene3D G3DSA:1.10.510.10 117 236 1.1E-14 T 29-03-2018 CVS42_RS00275 26932cb347fc025633f7313a52490817 237 SUPERFAMILY SSF56112 44 196 1.28E-18 T 29-03-2018 IPR011009 Protein kinase-like domain CVS42_RS00275 26932cb347fc025633f7313a52490817 237 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 1 234 34.793 T 29-03-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 CVS42_RS00275 26932cb347fc025633f7313a52490817 237 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 29 232 1.5E-63 T 29-03-2018 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 CVS42_RS00275 26932cb347fc025633f7313a52490817 237 Gene3D G3DSA:3.30.200.20 34 116 6.5E-5 T 29-03-2018 CVS42_RS10525 032d2915747b8783e94c18b9a542bd84 709 Gene3D G3DSA:1.10.8.60 556 613 1.6E-22 T 29-03-2018 CVS42_RS10525 032d2915747b8783e94c18b9a542bd84 709 SMART SM00065 42 180 0.54 T 29-03-2018 IPR003018 GAF domain GO:0005515 CVS42_RS10525 032d2915747b8783e94c18b9a542bd84 709 SMART SM00065 208 359 2.8E-6 T 29-03-2018 IPR003018 GAF domain GO:0005515 CVS42_RS10525 032d2915747b8783e94c18b9a542bd84 709 SUPERFAMILY SSF55781 194 357 7.41E-13 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS10525 032d2915747b8783e94c18b9a542bd84 709 SUPERFAMILY SSF46689 651 696 6.72E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS10525 032d2915747b8783e94c18b9a542bd84 709 Pfam PF00158 Sigma-54 interaction domain 383 550 9.2E-70 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CVS42_RS10525 032d2915747b8783e94c18b9a542bd84 709 Gene3D G3DSA:1.10.10.60 614 693 8.8E-10 T 29-03-2018 CVS42_RS10525 032d2915747b8783e94c18b9a542bd84 709 Pfam PF02954 Bacterial regulatory protein, Fis family 655 694 5.2E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS10525 032d2915747b8783e94c18b9a542bd84 709 SUPERFAMILY SSF55781 23 174 6.67E-6 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS10525 032d2915747b8783e94c18b9a542bd84 709 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 469 484 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CVS42_RS10525 032d2915747b8783e94c18b9a542bd84 709 SUPERFAMILY SSF52540 382 619 1.08E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS10525 032d2915747b8783e94c18b9a542bd84 709 Gene3D G3DSA:3.40.50.300 379 555 2.8E-27 T 29-03-2018 CVS42_RS10525 032d2915747b8783e94c18b9a542bd84 709 Pfam PF13185 GAF domain 289 349 2.1E-7 T 29-03-2018 IPR003018 GAF domain GO:0005515 CVS42_RS10525 032d2915747b8783e94c18b9a542bd84 709 Gene3D G3DSA:3.30.450.40 21 187 2.9E-7 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS10525 032d2915747b8783e94c18b9a542bd84 709 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 407 420 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CVS42_RS10525 032d2915747b8783e94c18b9a542bd84 709 Gene3D G3DSA:3.30.450.40 222 377 4.7E-12 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS10525 032d2915747b8783e94c18b9a542bd84 709 SMART SM00382 403 547 2.6E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS14300 40d37eb25d0b9036b8b54c8ff38899b2 471 SUPERFAMILY SSF75005 22 336 7.38E-107 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CVS42_RS14300 40d37eb25d0b9036b8b54c8ff38899b2 471 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 31 335 1.7E-91 T 29-03-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal CVS42_RS14300 40d37eb25d0b9036b8b54c8ff38899b2 471 Gene3D G3DSA:2.115.10.20 36 364 1.5E-95 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CVS42_RS14300 40d37eb25d0b9036b8b54c8ff38899b2 471 Gene3D G3DSA:2.60.120.560 383 470 1.0E-6 T 29-03-2018 CVS42_RS14300 40d37eb25d0b9036b8b54c8ff38899b2 471 SMART SM00640 31 431 9.0E-119 T 29-03-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 CVS42_RS14300 40d37eb25d0b9036b8b54c8ff38899b2 471 SUPERFAMILY SSF49899 335 466 7.6E-11 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CVS42_RS14300 40d37eb25d0b9036b8b54c8ff38899b2 471 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 19 441 2.2E-138 T 29-03-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 CVS42_RS14300 40d37eb25d0b9036b8b54c8ff38899b2 471 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 414 447 2.3E-5 T 29-03-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal CVS42_RS04395 d8fa6604d2b416b76e3e27defaf6fff8 398 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 1.6E-16 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CVS42_RS04395 d8fa6604d2b416b76e3e27defaf6fff8 398 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 153 166 1.6E-16 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CVS42_RS04395 d8fa6604d2b416b76e3e27defaf6fff8 398 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 126 143 1.6E-16 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CVS42_RS04395 d8fa6604d2b416b76e3e27defaf6fff8 398 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 288 378 5.0E-24 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CVS42_RS04395 d8fa6604d2b416b76e3e27defaf6fff8 398 SMART SM00936 288 378 5.5E-33 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CVS42_RS04395 d8fa6604d2b416b76e3e27defaf6fff8 398 SUPERFAMILY SSF69189 288 380 9.61E-25 T 29-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CVS42_RS04395 d8fa6604d2b416b76e3e27defaf6fff8 398 SUPERFAMILY SSF56601 3 288 7.65E-82 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CVS42_RS04395 d8fa6604d2b416b76e3e27defaf6fff8 398 Gene3D G3DSA:3.40.710.10 35 288 6.1E-48 T 29-03-2018 CVS42_RS04395 d8fa6604d2b416b76e3e27defaf6fff8 398 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 37 268 3.5E-90 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CVS42_RS04395 d8fa6604d2b416b76e3e27defaf6fff8 398 Gene3D G3DSA:2.60.410.10 289 378 7.5E-23 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CVS42_RS18745 4e2e9ea9226ed856badcc12cf74874cf 262 Pfam PF07072 Cell division protein 37 243 3.8E-74 T 29-03-2018 IPR009777 Cell division protein ZapD CVS42_RS18745 4e2e9ea9226ed856badcc12cf74874cf 262 Gene3D G3DSA:1.10.3900.10 31 192 7.7E-57 T 29-03-2018 CVS42_RS18745 4e2e9ea9226ed856badcc12cf74874cf 262 Gene3D G3DSA:2.60.440.10 193 262 9.4E-23 T 29-03-2018 IPR027462 Z ring-associated protein D, C-terminal domain CVS42_RS18745 4e2e9ea9226ed856badcc12cf74874cf 262 Hamap MF_01092 Cell division protein ZapD [zapD]. 22 262 30.955 T 29-03-2018 IPR009777 Cell division protein ZapD CVS42_RS18745 4e2e9ea9226ed856badcc12cf74874cf 262 SUPERFAMILY SSF160950 23 262 1.06E-82 T 29-03-2018 IPR009777 Cell division protein ZapD CVS42_RS13785 551fddec04fa32a115d4cf75ee9ba7e1 112 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 9.7E-26 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CVS42_RS13785 551fddec04fa32a115d4cf75ee9ba7e1 112 SUPERFAMILY SSF69754 2 106 2.09E-28 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CVS42_RS13785 551fddec04fa32a115d4cf75ee9ba7e1 112 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 1.3E-20 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CVS42_RS13785 551fddec04fa32a115d4cf75ee9ba7e1 112 Gene3D G3DSA:3.30.160.100 1 96 5.2E-24 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CVS42_RS14350 8433a0b3dd50ee390c4eb557c78e3bef 387 Gene3D G3DSA:1.20.1600.10 24 316 4.0E-37 T 29-03-2018 CVS42_RS14350 8433a0b3dd50ee390c4eb557c78e3bef 387 SUPERFAMILY SSF111369 50 280 9.94E-23 T 29-03-2018 CVS42_RS14350 8433a0b3dd50ee390c4eb557c78e3bef 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 260 2.4E-16 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CVS42_RS14350 8433a0b3dd50ee390c4eb557c78e3bef 387 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 370 2.2E-50 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CVS42_RS18755 1d2e017d94c4aa50f13318c1ac6830c1 135 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CVS42_RS18755 1d2e017d94c4aa50f13318c1ac6830c1 135 PRINTS PR00502 NUDIX hydrolase family signature 51 66 2.3E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CVS42_RS18755 1d2e017d94c4aa50f13318c1ac6830c1 135 PRINTS PR00502 NUDIX hydrolase family signature 37 51 2.3E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CVS42_RS18755 1d2e017d94c4aa50f13318c1ac6830c1 135 SUPERFAMILY SSF55811 5 131 7.04E-35 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CVS42_RS18755 1d2e017d94c4aa50f13318c1ac6830c1 135 Pfam PF00293 NUDIX domain 11 128 5.6E-19 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CVS42_RS18755 1d2e017d94c4aa50f13318c1ac6830c1 135 Gene3D G3DSA:3.90.79.10 6 134 2.0E-27 T 29-03-2018 CVS42_RS18755 1d2e017d94c4aa50f13318c1ac6830c1 135 TIGRFAM TIGR00586 mutt: mutator mutT protein 5 131 3.6E-40 T 29-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CVS42_RS18755 1d2e017d94c4aa50f13318c1ac6830c1 135 PRINTS PR01401 Mutator MutT protein signature 81 94 6.9E-6 T 29-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CVS42_RS18755 1d2e017d94c4aa50f13318c1ac6830c1 135 PRINTS PR01401 Mutator MutT protein signature 6 27 6.9E-6 T 29-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CVS42_RS19775 54d3c98060c15ade6b500499e3df1189 229 Pfam PF04172 LrgB-like family 14 224 5.0E-70 T 29-03-2018 IPR007300 CidB/LrgB family CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 SUPERFAMILY SSF82866 827 1053 1.83E-41 T 29-03-2018 CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 SUPERFAMILY SSF82714 203 284 1.96E-11 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 SUPERFAMILY SSF82693 54 148 2.44E-19 T 29-03-2018 CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 Gene3D G3DSA:1.20.1640.10 302 526 2.4E-37 T 29-03-2018 CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 Gene3D G3DSA:3.30.70.1430 54 156 1.0E-21 T 29-03-2018 CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 4.2E-25 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 PRINTS PR00702 Acriflavin resistance protein family signature 379 400 4.2E-25 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 4.2E-25 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 4.2E-25 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 PRINTS PR00702 Acriflavin resistance protein family signature 486 509 4.2E-25 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 PRINTS PR00702 Acriflavin resistance protein family signature 407 431 4.2E-25 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 Gene3D G3DSA:1.20.1640.10 863 1053 1.1E-34 T 29-03-2018 CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 Gene3D G3DSA:3.30.70.1430 579 690 6.6E-21 T 29-03-2018 CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 SUPERFAMILY SSF82693 153 200 1.74E-12 T 29-03-2018 CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 SUPERFAMILY SSF82693 290 345 1.74E-12 T 29-03-2018 CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 SUPERFAMILY SSF82714 739 825 7.46E-9 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 SUPERFAMILY SSF82866 312 513 6.28E-39 T 29-03-2018 CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 Gene3D G3DSA:3.30.2090.10 199 286 1.4E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 Gene3D G3DSA:3.30.2090.10 737 828 1.2E-11 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 SUPERFAMILY SSF82693 577 691 1.46E-14 T 29-03-2018 CVS42_RS14250 9d4678a54c95a4dea6b37619cb42c9a7 1054 Pfam PF00873 AcrB/AcrD/AcrF family 27 1048 1.8E-156 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS05100 bf409d2cd1f0134a3cf4a064d85a194b 117 Gene3D G3DSA:3.40.1260.10 1 117 9.9E-30 T 29-03-2018 CVS42_RS05100 bf409d2cd1f0134a3cf4a064d85a194b 117 Pfam PF02635 DsrE/DsrF-like family 4 117 6.5E-23 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CVS42_RS05100 bf409d2cd1f0134a3cf4a064d85a194b 117 SUPERFAMILY SSF75169 4 117 1.07E-31 T 29-03-2018 IPR027396 DsrEFH-like CVS42_RS11890 4f1acd0942ef29bb22c9d41f030ad072 94 SMART SM00411 1 91 3.2E-41 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS11890 4f1acd0942ef29bb22c9d41f030ad072 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 1.2E-47 T 29-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CVS42_RS11890 4f1acd0942ef29bb22c9d41f030ad072 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS11890 4f1acd0942ef29bb22c9d41f030ad072 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS11890 4f1acd0942ef29bb22c9d41f030ad072 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS11890 4f1acd0942ef29bb22c9d41f030ad072 94 SUPERFAMILY SSF47729 1 91 7.07E-30 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CVS42_RS11890 4f1acd0942ef29bb22c9d41f030ad072 94 Gene3D G3DSA:4.10.520.10 1 93 1.1E-31 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CVS42_RS11890 4f1acd0942ef29bb22c9d41f030ad072 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.3E-30 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CVS42_RS11890 4f1acd0942ef29bb22c9d41f030ad072 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CVS42_RS11890 4f1acd0942ef29bb22c9d41f030ad072 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.933 T 29-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CVS42_RS02065 52d8fdc6d565ad0718d39825b09bdbcb 586 Gene3D G3DSA:3.40.50.1220 239 381 6.3E-24 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CVS42_RS02065 52d8fdc6d565ad0718d39825b09bdbcb 586 SUPERFAMILY SSF52518 389 582 1.39E-22 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS02065 52d8fdc6d565ad0718d39825b09bdbcb 586 SUPERFAMILY SSF52518 19 200 4.71E-35 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS02065 52d8fdc6d565ad0718d39825b09bdbcb 586 SUPERFAMILY SSF52467 242 363 5.09E-8 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CVS42_RS02065 52d8fdc6d565ad0718d39825b09bdbcb 586 Gene3D G3DSA:3.40.50.970 19 224 1.2E-51 T 29-03-2018 CVS42_RS02065 52d8fdc6d565ad0718d39825b09bdbcb 586 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 28 455 5.9E-139 T 29-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CVS42_RS02065 52d8fdc6d565ad0718d39825b09bdbcb 586 Gene3D G3DSA:3.40.50.970 382 585 1.1E-21 T 29-03-2018 CVS42_RS02065 52d8fdc6d565ad0718d39825b09bdbcb 586 Pfam PF16582 Middle domain of thiamine pyrophosphate 205 412 1.6E-57 T 29-03-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CVS42_RS02065 52d8fdc6d565ad0718d39825b09bdbcb 586 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 22 583 34.551 T 29-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CVS42_RS02065 52d8fdc6d565ad0718d39825b09bdbcb 586 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 431 565 2.5E-6 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CVS42_RS02065 52d8fdc6d565ad0718d39825b09bdbcb 586 PIRSF PIRSF004983 19 585 4.4E-170 T 29-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CVS42_RS02065 52d8fdc6d565ad0718d39825b09bdbcb 586 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 29 158 3.7E-30 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CVS42_RS19865 05823fe709ac6047ef786d31d8c410ba 491 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 128 145 - T 29-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 CVS42_RS19865 05823fe709ac6047ef786d31d8c410ba 491 Gene3D G3DSA:3.40.190.10 131 408 9.8E-43 T 29-03-2018 CVS42_RS19865 05823fe709ac6047ef786d31d8c410ba 491 SUPERFAMILY SSF53850 21 404 9.83E-63 T 29-03-2018 CVS42_RS19865 05823fe709ac6047ef786d31d8c410ba 491 Pfam PF01547 Bacterial extracellular solute-binding protein 31 318 1.9E-33 T 29-03-2018 IPR006059 Solute-binding family 1 GO:0006810 CVS42_RS19150 65ebcc650c94a558cc5ac8b10fd87c59 98 TIGRFAM TIGR03578 EF_0831: conserved hypothetical protein EF_0831/AHA_3912 2 97 1.6E-42 T 29-03-2018 IPR020037 Protein of unknown function DUF4312 CVS42_RS19150 65ebcc650c94a558cc5ac8b10fd87c59 98 Pfam PF14189 Domain of unknown function (DUF4312) 5 87 2.5E-35 T 29-03-2018 IPR020037 Protein of unknown function DUF4312 CVS42_RS04805 17d52ee9df1f240253f3367716fbccba 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 3.5E-117 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CVS42_RS04805 17d52ee9df1f240253f3367716fbccba 334 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 2.4E-85 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS04805 17d52ee9df1f240253f3367716fbccba 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 42.758 T 29-03-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 CVS42_RS04805 17d52ee9df1f240253f3367716fbccba 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 1.0E-27 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CVS42_RS04805 17d52ee9df1f240253f3367716fbccba 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 1.0E-27 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CVS42_RS04805 17d52ee9df1f240253f3367716fbccba 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 1.0E-27 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CVS42_RS04805 17d52ee9df1f240253f3367716fbccba 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 1.0E-27 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CVS42_RS04805 17d52ee9df1f240253f3367716fbccba 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS04805 17d52ee9df1f240253f3367716fbccba 334 SUPERFAMILY SSF52374 5 330 1.74E-101 T 29-03-2018 CVS42_RS04805 17d52ee9df1f240253f3367716fbccba 334 Gene3D G3DSA:3.40.50.620 1 190 2.2E-76 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS04805 17d52ee9df1f240253f3367716fbccba 334 Gene3D G3DSA:1.10.240.10 191 313 1.6E-34 T 29-03-2018 CVS42_RS00710 2f0ebb2cab0a48346403cab696d9dcf5 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS00710 2f0ebb2cab0a48346403cab696d9dcf5 506 Gene3D G3DSA:3.40.50.300 2 240 4.1E-51 T 29-03-2018 CVS42_RS00710 2f0ebb2cab0a48346403cab696d9dcf5 506 SUPERFAMILY SSF52540 12 234 4.18E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00710 2f0ebb2cab0a48346403cab696d9dcf5 506 Pfam PF00005 ABC transporter 29 178 2.2E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS00710 2f0ebb2cab0a48346403cab696d9dcf5 506 Pfam PF00005 ABC transporter 280 434 2.5E-18 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS00710 2f0ebb2cab0a48346403cab696d9dcf5 506 Gene3D G3DSA:3.40.50.300 251 498 7.1E-34 T 29-03-2018 CVS42_RS00710 2f0ebb2cab0a48346403cab696d9dcf5 506 SUPERFAMILY SSF52540 254 492 6.19E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00710 2f0ebb2cab0a48346403cab696d9dcf5 506 SMART SM00382 38 233 2.5E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS00710 2f0ebb2cab0a48346403cab696d9dcf5 506 SMART SM00382 288 483 0.56 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS09830 832915b266cc3e1c6427a7a10f7a7539 1612 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1603 0.0 T 29-03-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 CVS42_RS09830 832915b266cc3e1c6427a7a10f7a7539 1612 SUPERFAMILY SSF51735 947 1049 1.44E-28 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS09830 832915b266cc3e1c6427a7a10f7a7539 1612 SUPERFAMILY SSF51735 1085 1283 1.44E-28 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS09830 832915b266cc3e1c6427a7a10f7a7539 1612 Gene3D G3DSA:3.40.50.10860 797 935 7.2E-4 T 29-03-2018 CVS42_RS09830 832915b266cc3e1c6427a7a10f7a7539 1612 SUPERFAMILY SSF53223 757 958 4.12E-21 T 29-03-2018 CVS42_RS09830 832915b266cc3e1c6427a7a10f7a7539 1612 PIRSF PIRSF036761 1 1610 0.0 T 29-03-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 CVS42_RS09830 832915b266cc3e1c6427a7a10f7a7539 1612 Gene3D G3DSA:3.40.50.720 940 1286 1.8E-48 T 29-03-2018 CVS42_RS09530 8dc67f24d080ee2441b6967a01c31f88 214 Hamap MF_00551 Uridine kinase [udk]. 5 213 39.534 T 29-03-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 CVS42_RS09530 8dc67f24d080ee2441b6967a01c31f88 214 TIGRFAM TIGR00235 udk: uridine kinase 5 212 5.0E-88 T 29-03-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 CVS42_RS09530 8dc67f24d080ee2441b6967a01c31f88 214 PRINTS PR00988 Uridine kinase signature 179 192 6.9E-36 T 29-03-2018 CVS42_RS09530 8dc67f24d080ee2441b6967a01c31f88 214 PRINTS PR00988 Uridine kinase signature 157 168 6.9E-36 T 29-03-2018 CVS42_RS09530 8dc67f24d080ee2441b6967a01c31f88 214 PRINTS PR00988 Uridine kinase signature 87 102 6.9E-36 T 29-03-2018 CVS42_RS09530 8dc67f24d080ee2441b6967a01c31f88 214 PRINTS PR00988 Uridine kinase signature 143 153 6.9E-36 T 29-03-2018 CVS42_RS09530 8dc67f24d080ee2441b6967a01c31f88 214 PRINTS PR00988 Uridine kinase signature 42 53 6.9E-36 T 29-03-2018 CVS42_RS09530 8dc67f24d080ee2441b6967a01c31f88 214 PRINTS PR00988 Uridine kinase signature 8 25 6.9E-36 T 29-03-2018 CVS42_RS09530 8dc67f24d080ee2441b6967a01c31f88 214 Gene3D G3DSA:3.40.50.300 4 213 9.2E-55 T 29-03-2018 CVS42_RS09530 8dc67f24d080ee2441b6967a01c31f88 214 SUPERFAMILY SSF52540 9 205 7.83E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09530 8dc67f24d080ee2441b6967a01c31f88 214 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 3.5E-42 T 29-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 CVS42_RS12195 b892ccee5a2e8de810684cfdbb1d1e1f 641 Gene3D G3DSA:3.30.70.270 221 393 4.5E-22 T 29-03-2018 CVS42_RS12195 b892ccee5a2e8de810684cfdbb1d1e1f 641 Gene3D G3DSA:3.20.20.450 394 636 1.9E-44 T 29-03-2018 IPR001633 EAL domain CVS42_RS12195 b892ccee5a2e8de810684cfdbb1d1e1f 641 SUPERFAMILY SSF55073 243 393 3.14E-16 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS12195 b892ccee5a2e8de810684cfdbb1d1e1f 641 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 388 6.5E-13 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS12195 b892ccee5a2e8de810684cfdbb1d1e1f 641 SUPERFAMILY SSF141868 410 634 5.1E-42 T 29-03-2018 IPR001633 EAL domain CVS42_RS12195 b892ccee5a2e8de810684cfdbb1d1e1f 641 SMART SM00267 226 394 8.1E-8 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS12195 b892ccee5a2e8de810684cfdbb1d1e1f 641 SMART SM00052 403 641 3.2E-11 T 29-03-2018 IPR001633 EAL domain CVS42_RS12195 b892ccee5a2e8de810684cfdbb1d1e1f 641 Pfam PF16448 LapD/MoxY periplasmic domain 24 146 3.8E-40 T 29-03-2018 IPR032244 LapD/MoxY, periplasmic domain CVS42_RS12195 b892ccee5a2e8de810684cfdbb1d1e1f 641 Pfam PF00563 EAL domain 411 634 1.7E-42 T 29-03-2018 IPR001633 EAL domain CVS42_RS12885 742873859f4f5c7a724a2c47edef5df7 238 Gene3D G3DSA:2.40.70.10 94 222 1.1E-44 T 29-03-2018 IPR021109 Aspartic peptidase domain CVS42_RS12885 742873859f4f5c7a724a2c47edef5df7 238 Pfam PF05618 Putative ATP-dependant zinc protease 97 232 7.2E-42 T 29-03-2018 CVS42_RS12885 742873859f4f5c7a724a2c47edef5df7 238 SUPERFAMILY SSF50630 98 229 6.19E-41 T 29-03-2018 IPR021109 Aspartic peptidase domain CVS42_RS17040 50777d3a25f356c337107ff6a5f01945 700 SUPERFAMILY SSF58104 390 699 2.88E-74 T 29-03-2018 CVS42_RS17040 50777d3a25f356c337107ff6a5f01945 700 Gene3D G3DSA:1.10.287.1060 392 468 0.075 T 29-03-2018 CVS42_RS17040 50777d3a25f356c337107ff6a5f01945 700 Gene3D G3DSA:3.30.450.20 217 336 8.1E-12 T 29-03-2018 CVS42_RS17040 50777d3a25f356c337107ff6a5f01945 700 SMART SM00283 437 698 6.7E-70 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS17040 50777d3a25f356c337107ff6a5f01945 700 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 481 664 2.3E-44 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS17040 50777d3a25f356c337107ff6a5f01945 700 Gene3D G3DSA:3.30.450.20 77 216 1.2E-19 T 29-03-2018 CVS42_RS17040 50777d3a25f356c337107ff6a5f01945 700 Pfam PF00672 HAMP domain 368 418 7.7E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS17040 50777d3a25f356c337107ff6a5f01945 700 Gene3D G3DSA:1.10.287.950 469 700 5.0E-52 T 29-03-2018 CVS42_RS17040 50777d3a25f356c337107ff6a5f01945 700 SMART SM00304 368 422 5.6E-13 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS17040 50777d3a25f356c337107ff6a5f01945 700 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 564 593 3.6E-5 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS17040 50777d3a25f356c337107ff6a5f01945 700 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 465 494 3.6E-5 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 SUPERFAMILY SSF88723 5 170 1.35E-53 T 29-03-2018 IPR029060 PIN domain-like CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 Gene3D G3DSA:3.30.420.10 315 534 1.0E-55 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 272 1.5E-28 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 TIGRFAM TIGR00593 pola: DNA polymerase I 7 921 7.2E-285 T 29-03-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 7 170 5.2E-52 T 29-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 Pfam PF01612 3'-5' exonuclease 322 509 1.1E-39 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 SUPERFAMILY SSF47807 171 292 3.44E-29 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 Gene3D G3DSA:3.30.70.370 746 921 2.9E-49 T 29-03-2018 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 Gene3D G3DSA:3.30.70.370 649 745 6.4E-20 T 29-03-2018 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 Gene3D G3DSA:1.10.150.20 186 269 1.2E-24 T 29-03-2018 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 SMART SM00279 173 208 1.9E-11 T 29-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 SMART SM00475 5 268 7.6E-117 T 29-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 SUPERFAMILY SSF53098 325 509 5.48E-60 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 Gene3D G3DSA:1.20.1060.10 535 648 1.4E-32 T 29-03-2018 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 SMART SM00482 678 885 7.2E-121 T 29-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 Pfam PF00476 DNA polymerase family A 544 918 1.1E-156 T 29-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 805 816 6.3E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 670 685 6.3E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 647 669 6.3E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 868 881 6.3E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 692 715 6.3E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 783 794 6.3E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 722 735 6.3E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 746 771 6.3E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 837 853 6.3E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 ProSitePatterns PS00447 DNA polymerase family A signature. 746 765 - T 29-03-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 Gene3D G3DSA:3.40.50.1010 5 185 7.8E-65 T 29-03-2018 IPR029060 PIN domain-like CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 SMART SM00474 322 509 5.3E-43 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CVS42_RS21450 cbabe75f70eb4e435d2f71136fb3edf2 921 SUPERFAMILY SSF56672 514 921 8.12E-158 T 29-03-2018 CVS42_RS16220 6a4566541afe9be80cddc35c89c53cfd 186 Gene3D G3DSA:3.40.50.880 1 186 2.7E-38 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS16220 6a4566541afe9be80cddc35c89c53cfd 186 Pfam PF01965 DJ-1/PfpI family 2 168 2.0E-39 T 29-03-2018 IPR002818 DJ-1/PfpI CVS42_RS16220 6a4566541afe9be80cddc35c89c53cfd 186 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 3 181 7.2E-56 T 29-03-2018 IPR006287 Protein DJ-1 CVS42_RS16220 6a4566541afe9be80cddc35c89c53cfd 186 SUPERFAMILY SSF52317 2 185 3.21E-46 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS02325 e6d6935e4fcdcd54809c0a3ec1d98bba 258 Gene3D G3DSA:3.40.50.300 1 240 2.4E-55 T 29-03-2018 CVS42_RS02325 e6d6935e4fcdcd54809c0a3ec1d98bba 258 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS02325 e6d6935e4fcdcd54809c0a3ec1d98bba 258 SUPERFAMILY SSF52540 3 214 5.42E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS02325 e6d6935e4fcdcd54809c0a3ec1d98bba 258 SMART SM00382 29 196 1.8E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS02325 e6d6935e4fcdcd54809c0a3ec1d98bba 258 Pfam PF00005 ABC transporter 20 147 9.3E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS13310 79cc3ba2a7c6add1fd04f4b7d5aea4d9 302 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 95 273 1.2E-49 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CVS42_RS13310 79cc3ba2a7c6add1fd04f4b7d5aea4d9 302 Pfam PF07549 SecD/SecF GG Motif 28 48 7.1E-6 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CVS42_RS13310 79cc3ba2a7c6add1fd04f4b7d5aea4d9 302 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 5 287 21.838 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CVS42_RS13310 79cc3ba2a7c6add1fd04f4b7d5aea4d9 302 SUPERFAMILY SSF82866 118 283 8.37E-33 T 29-03-2018 CVS42_RS13310 79cc3ba2a7c6add1fd04f4b7d5aea4d9 302 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 33 276 1.9E-59 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CVS42_RS13310 79cc3ba2a7c6add1fd04f4b7d5aea4d9 302 Gene3D G3DSA:1.20.1640.10 95 296 4.2E-30 T 29-03-2018 CVS42_RS13310 79cc3ba2a7c6add1fd04f4b7d5aea4d9 302 Pfam PF02355 Protein export membrane protein 105 280 1.2E-53 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CVS42_RS13310 79cc3ba2a7c6add1fd04f4b7d5aea4d9 302 PRINTS PR01755 Bacterial translocase SecF protein signature 32 47 8.2E-24 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CVS42_RS13310 79cc3ba2a7c6add1fd04f4b7d5aea4d9 302 PRINTS PR01755 Bacterial translocase SecF protein signature 224 239 8.2E-24 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CVS42_RS13310 79cc3ba2a7c6add1fd04f4b7d5aea4d9 302 PRINTS PR01755 Bacterial translocase SecF protein signature 192 210 8.2E-24 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CVS42_RS13310 79cc3ba2a7c6add1fd04f4b7d5aea4d9 302 PRINTS PR01755 Bacterial translocase SecF protein signature 144 158 8.2E-24 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CVS42_RS06285 cadcdfcb982f0ff566b5203c91892202 403 Pfam PF00563 EAL domain 146 380 1.5E-67 T 29-03-2018 IPR001633 EAL domain CVS42_RS06285 cadcdfcb982f0ff566b5203c91892202 403 SUPERFAMILY SSF141868 146 390 4.71E-83 T 29-03-2018 IPR001633 EAL domain CVS42_RS06285 cadcdfcb982f0ff566b5203c91892202 403 SMART SM00448 8 125 7.1E-16 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06285 cadcdfcb982f0ff566b5203c91892202 403 Pfam PF00072 Response regulator receiver domain 10 125 1.0E-17 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06285 cadcdfcb982f0ff566b5203c91892202 403 SMART SM00052 140 385 6.4E-90 T 29-03-2018 IPR001633 EAL domain CVS42_RS06285 cadcdfcb982f0ff566b5203c91892202 403 Gene3D G3DSA:3.40.50.2300 1 147 2.6E-22 T 29-03-2018 CVS42_RS06285 cadcdfcb982f0ff566b5203c91892202 403 Gene3D G3DSA:3.20.20.450 148 389 2.5E-84 T 29-03-2018 IPR001633 EAL domain CVS42_RS06285 cadcdfcb982f0ff566b5203c91892202 403 SUPERFAMILY SSF52172 8 131 8.68E-24 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS07050 e6dd49c699bdf2b218bc0bb6ef19a7fd 334 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 312 8.6E-78 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CVS42_RS07050 e6dd49c699bdf2b218bc0bb6ef19a7fd 334 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 33 330 4.3E-117 T 29-03-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CVS42_RS07050 e6dd49c699bdf2b218bc0bb6ef19a7fd 334 Gene3D G3DSA:3.40.50.1100 57 112 1.6E-18 T 29-03-2018 CVS42_RS07050 e6dd49c699bdf2b218bc0bb6ef19a7fd 334 Gene3D G3DSA:3.40.50.1100 113 329 1.2E-53 T 29-03-2018 CVS42_RS07050 e6dd49c699bdf2b218bc0bb6ef19a7fd 334 SUPERFAMILY SSF53686 11 321 1.15E-91 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CVS42_RS07050 e6dd49c699bdf2b218bc0bb6ef19a7fd 334 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CVS42_RS18860 efe9b325e5664e525504449a5927de5f 315 Pfam PF00691 OmpA family 181 275 2.4E-13 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS18860 efe9b325e5664e525504449a5927de5f 315 Gene3D G3DSA:3.30.1330.60 132 314 1.9E-29 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS18860 efe9b325e5664e525504449a5927de5f 315 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 11 63 5.5E-14 T 29-03-2018 IPR025713 Motility protein B, N-terminal domain CVS42_RS18860 efe9b325e5664e525504449a5927de5f 315 SUPERFAMILY SSF103088 166 282 1.57E-19 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS07555 723ceda71c1959c58d6f15f459a2d1ba 350 Pfam PF02547 Queuosine biosynthesis protein 3 343 1.0E-133 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CVS42_RS07555 723ceda71c1959c58d6f15f459a2d1ba 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 47.351 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CVS42_RS07555 723ceda71c1959c58d6f15f459a2d1ba 350 Gene3D G3DSA:3.40.1780.10 173 344 8.1E-66 T 29-03-2018 CVS42_RS07555 723ceda71c1959c58d6f15f459a2d1ba 350 Gene3D G3DSA:3.40.1780.10 1 125 1.5E-31 T 29-03-2018 CVS42_RS07555 723ceda71c1959c58d6f15f459a2d1ba 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 343 3.1E-156 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CVS42_RS07555 723ceda71c1959c58d6f15f459a2d1ba 350 SUPERFAMILY SSF111337 1 343 1.96E-138 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CVS42_RS06335 330c796b0979a8a59c8782c1ab881fbd 111 SUPERFAMILY SSF47226 2 110 1.44E-25 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS06335 330c796b0979a8a59c8782c1ab881fbd 111 Pfam PF01627 Hpt domain 24 98 1.2E-11 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS06335 330c796b0979a8a59c8782c1ab881fbd 111 Gene3D G3DSA:1.20.120.160 1 111 4.3E-23 T 29-03-2018 CVS42_RS14775 ec06bd7a483b03dd9706eac8131f431e 122 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 122 1.0E-47 T 29-03-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 CVS42_RS18550 083e0463142f12cd5edb02a8c61f10fa 986 Pfam PF14559 Tetratricopeptide repeat 48 108 3.0E-7 T 29-03-2018 CVS42_RS18550 083e0463142f12cd5edb02a8c61f10fa 986 Gene3D G3DSA:1.25.40.10 561 683 1.2E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS18550 083e0463142f12cd5edb02a8c61f10fa 986 Pfam PF13283 Bacteriophage N adsorption protein A C-term 780 961 2.0E-37 T 29-03-2018 IPR025137 Bacteriophage N4 adsorption protein A, C-terminal CVS42_RS18550 083e0463142f12cd5edb02a8c61f10fa 986 Gene3D G3DSA:1.25.40.10 317 560 2.1E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS18550 083e0463142f12cd5edb02a8c61f10fa 986 SUPERFAMILY SSF48452 521 640 8.97E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS18550 083e0463142f12cd5edb02a8c61f10fa 986 SUPERFAMILY SSF48452 41 111 8.97E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS18550 083e0463142f12cd5edb02a8c61f10fa 986 Gene3D G3DSA:1.25.40.10 39 312 1.7E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS16575 7838195ad965074d414b205e326bae6f 584 Gene3D G3DSA:3.30.450.20 84 204 4.5E-11 T 29-03-2018 CVS42_RS16575 7838195ad965074d414b205e326bae6f 584 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 419 2.9E-28 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS16575 7838195ad965074d414b205e326bae6f 584 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 315 344 2.9E-28 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS16575 7838195ad965074d414b205e326bae6f 584 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 421 450 2.9E-28 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS16575 7838195ad965074d414b205e326bae6f 584 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 70 85 2.9E-28 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS16575 7838195ad965074d414b205e326bae6f 584 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 361 502 7.6E-35 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS16575 7838195ad965074d414b205e326bae6f 584 Gene3D G3DSA:1.10.287.950 342 520 2.7E-47 T 29-03-2018 CVS42_RS16575 7838195ad965074d414b205e326bae6f 584 SUPERFAMILY SSF58104 268 537 4.45E-66 T 29-03-2018 CVS42_RS16575 7838195ad965074d414b205e326bae6f 584 Gene3D G3DSA:1.10.287.1060 228 333 5.3E-4 T 29-03-2018 CVS42_RS16575 7838195ad965074d414b205e326bae6f 584 SMART SM00283 301 534 1.7E-69 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS08350 9a1bfcd6cef7c156d1e632410e5d3fb3 515 SUPERFAMILY SSF55021 2 69 3.4E-7 T 29-03-2018 CVS42_RS08350 9a1bfcd6cef7c156d1e632410e5d3fb3 515 Gene3D G3DSA:1.10.8.60 379 450 2.8E-22 T 29-03-2018 CVS42_RS08350 9a1bfcd6cef7c156d1e632410e5d3fb3 515 SUPERFAMILY SSF55785 81 159 3.14E-8 T 29-03-2018 IPR000014 PAS domain CVS42_RS08350 9a1bfcd6cef7c156d1e632410e5d3fb3 515 Pfam PF00158 Sigma-54 interaction domain 208 372 2.4E-61 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CVS42_RS08350 9a1bfcd6cef7c156d1e632410e5d3fb3 515 SMART SM00091 80 146 8.9E-6 T 29-03-2018 IPR000014 PAS domain CVS42_RS08350 9a1bfcd6cef7c156d1e632410e5d3fb3 515 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 419 428 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CVS42_RS08350 9a1bfcd6cef7c156d1e632410e5d3fb3 515 Gene3D G3DSA:3.30.450.20 82 184 2.8E-8 T 29-03-2018 CVS42_RS08350 9a1bfcd6cef7c156d1e632410e5d3fb3 515 SUPERFAMILY SSF52540 210 447 6.52E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS08350 9a1bfcd6cef7c156d1e632410e5d3fb3 515 Pfam PF00989 PAS fold 81 122 2.5E-5 T 29-03-2018 IPR013767 PAS fold GO:0006355 CVS42_RS08350 9a1bfcd6cef7c156d1e632410e5d3fb3 515 Gene3D G3DSA:1.10.10.60 460 514 1.0E-7 T 29-03-2018 CVS42_RS08350 9a1bfcd6cef7c156d1e632410e5d3fb3 515 SUPERFAMILY SSF46689 456 513 2.45E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS08350 9a1bfcd6cef7c156d1e632410e5d3fb3 515 Gene3D G3DSA:3.30.70.260 1 81 1.7E-8 T 29-03-2018 CVS42_RS08350 9a1bfcd6cef7c156d1e632410e5d3fb3 515 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CVS42_RS08350 9a1bfcd6cef7c156d1e632410e5d3fb3 515 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 292 307 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CVS42_RS08350 9a1bfcd6cef7c156d1e632410e5d3fb3 515 Gene3D G3DSA:3.40.50.300 203 378 2.1E-25 T 29-03-2018 CVS42_RS08350 9a1bfcd6cef7c156d1e632410e5d3fb3 515 SMART SM00382 226 370 1.2E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS08350 9a1bfcd6cef7c156d1e632410e5d3fb3 515 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 467 514 3.1E-28 T 29-03-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 CVS42_RS02295 045185e0b6bd68a6668822072f7fd6a9 244 Gene3D G3DSA:3.40.190.10 15 243 1.2E-5 T 29-03-2018 CVS42_RS02295 045185e0b6bd68a6668822072f7fd6a9 244 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 88 242 2.8E-6 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS02295 045185e0b6bd68a6668822072f7fd6a9 244 SUPERFAMILY SSF53850 14 243 3.15E-21 T 29-03-2018 CVS42_RS07180 e3816e1dd286dedce71ee3f07d7b6e15 398 Pfam PF07690 Major Facilitator Superfamily 14 352 3.7E-45 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS07180 e3816e1dd286dedce71ee3f07d7b6e15 398 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 385 2.0E-60 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CVS42_RS07180 e3816e1dd286dedce71ee3f07d7b6e15 398 Gene3D G3DSA:1.20.1250.20 4 194 2.2E-28 T 29-03-2018 CVS42_RS07180 e3816e1dd286dedce71ee3f07d7b6e15 398 Gene3D G3DSA:1.20.1250.20 198 396 9.7E-13 T 29-03-2018 CVS42_RS07180 e3816e1dd286dedce71ee3f07d7b6e15 398 SUPERFAMILY SSF103473 4 388 4.71E-57 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS20450 950cb3b5fbeb625fff69475c2b488699 143 Gene3D G3DSA:3.40.30.10 21 98 4.7E-4 T 29-03-2018 CVS42_RS20450 950cb3b5fbeb625fff69475c2b488699 143 Pfam PF04214 Protein of unknown function, DUF 50 117 2.2E-31 T 29-03-2018 IPR007332 Protein of unknown function DUF411 CVS42_RS20450 950cb3b5fbeb625fff69475c2b488699 143 SUPERFAMILY SSF52833 23 98 1.66E-5 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS14755 59b76785f47cf042c2e575d805c1b4ad 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 1.0E-140 T 29-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CVS42_RS14755 59b76785f47cf042c2e575d805c1b4ad 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 3.7E-70 T 29-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CVS42_RS14755 59b76785f47cf042c2e575d805c1b4ad 402 Pfam PF07670 Nucleoside recognition 90 185 1.5E-6 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CVS42_RS14755 59b76785f47cf042c2e575d805c1b4ad 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 6.1E-26 T 29-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CVS42_RS20520 cb18e6898a099ced570a1626ef1678d9 350 SUPERFAMILY SSF111369 44 110 7.32E-8 T 29-03-2018 CVS42_RS20520 cb18e6898a099ced570a1626ef1678d9 350 Gene3D G3DSA:2.40.50.100 44 115 1.9E-16 T 29-03-2018 CVS42_RS20520 cb18e6898a099ced570a1626ef1678d9 350 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 288 2.2E-21 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CVS42_RS20520 cb18e6898a099ced570a1626ef1678d9 350 Pfam PF00529 HlyD membrane-fusion protein of T1SS 104 339 1.8E-9 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CVS42_RS20520 cb18e6898a099ced570a1626ef1678d9 350 Gene3D G3DSA:1.20.1600.10 181 283 6.6E-17 T 29-03-2018 CVS42_RS20520 cb18e6898a099ced570a1626ef1678d9 350 Gene3D G3DSA:1.10.287.470 116 180 1.7E-5 T 29-03-2018 CVS42_RS20520 cb18e6898a099ced570a1626ef1678d9 350 SUPERFAMILY SSF111369 160 285 2.75E-15 T 29-03-2018 CVS42_RS08465 e8142c1a3fba5cacde90fd7cb1c432cf 586 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 12 404 6.0E-151 T 29-03-2018 IPR003776 YcaO-like domain CVS42_RS08465 e8142c1a3fba5cacde90fd7cb1c432cf 586 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 60 391 2.5E-75 T 29-03-2018 IPR003776 YcaO-like domain CVS42_RS14215 03590877eec3ed7bcb583ca413584aad 564 Gene3D G3DSA:3.90.1150.10 403 564 3.1E-18 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS14215 03590877eec3ed7bcb583ca413584aad 564 SUPERFAMILY SSF53383 88 471 4.31E-64 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS14215 03590877eec3ed7bcb583ca413584aad 564 SUPERFAMILY SSF53383 515 563 4.31E-64 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS14215 03590877eec3ed7bcb583ca413584aad 564 Gene3D G3DSA:3.40.640.10 135 402 2.9E-24 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS14215 03590877eec3ed7bcb583ca413584aad 564 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 104 468 2.0E-22 T 29-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 CVS42_RS20015 d92de05e0018bf1e0651f5301a4395ce 475 Pfam PF00909 Ammonium Transporter Family 48 473 1.7E-111 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CVS42_RS20015 d92de05e0018bf1e0651f5301a4395ce 475 SUPERFAMILY SSF111352 41 454 2.35E-117 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CVS42_RS20015 d92de05e0018bf1e0651f5301a4395ce 475 Gene3D G3DSA:1.10.3430.10 37 454 5.4E-124 T 29-03-2018 CVS42_RS20015 d92de05e0018bf1e0651f5301a4395ce 475 ProSitePatterns PS01219 Ammonium transporters signature. 221 246 - T 29-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CVS42_RS20015 d92de05e0018bf1e0651f5301a4395ce 475 TIGRFAM TIGR00836 amt: ammonium transporter 45 473 1.6E-125 T 29-03-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CVS42_RS00245 edd2a2f70b0732ae922f0e2874daf79f 243 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 217 5.3E-20 T 29-03-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 CVS42_RS00245 edd2a2f70b0732ae922f0e2874daf79f 243 Gene3D G3DSA:3.40.1280.10 1 186 1.5E-46 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CVS42_RS00245 edd2a2f70b0732ae922f0e2874daf79f 243 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 196 36.061 T 29-03-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 CVS42_RS00245 edd2a2f70b0732ae922f0e2874daf79f 243 Pfam PF00588 SpoU rRNA Methylase family 20 159 1.5E-33 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CVS42_RS00245 edd2a2f70b0732ae922f0e2874daf79f 243 SUPERFAMILY SSF75217 4 173 8.5E-49 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CVS42_RS17105 d897af55fa1ece8fcd2b568cee8dd91b 89 Pfam PF09905 DNA-binding protein VF530 10 72 2.4E-37 T 29-03-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 CVS42_RS17105 d897af55fa1ece8fcd2b568cee8dd91b 89 Gene3D G3DSA:1.10.720.30 18 74 1.4E-34 T 29-03-2018 IPR003034 SAP domain CVS42_RS10915 03a4777c641b79148b580c22ff72834e 253 SUPERFAMILY SSF53850 19 245 1.99E-24 T 29-03-2018 CVS42_RS10915 03a4777c641b79148b580c22ff72834e 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 21 246 2.5E-14 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS10915 03a4777c641b79148b580c22ff72834e 253 SMART SM00062 20 249 0.001 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS10915 03a4777c641b79148b580c22ff72834e 253 Gene3D G3DSA:3.40.190.10 20 126 8.6E-9 T 29-03-2018 CVS42_RS10915 03a4777c641b79148b580c22ff72834e 253 Gene3D G3DSA:3.40.190.10 127 249 1.1E-6 T 29-03-2018 CVS42_RS04045 8bf6c4585e23a29bc20b7fa70d566043 464 Gene3D G3DSA:1.10.860.10 9 161 2.6E-49 T 29-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CVS42_RS04045 8bf6c4585e23a29bc20b7fa70d566043 464 SMART SM00382 215 421 0.0046 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS04045 8bf6c4585e23a29bc20b7fa70d566043 464 Gene3D G3DSA:3.40.50.300 179 462 1.3E-65 T 29-03-2018 CVS42_RS04045 8bf6c4585e23a29bc20b7fa70d566043 464 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 19 456 1.8E-176 T 29-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CVS42_RS04045 8bf6c4585e23a29bc20b7fa70d566043 464 SUPERFAMILY SSF48024 17 128 1.96E-39 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CVS42_RS04045 8bf6c4585e23a29bc20b7fa70d566043 464 SUPERFAMILY SSF52540 196 267 4.3E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS04045 8bf6c4585e23a29bc20b7fa70d566043 464 SUPERFAMILY SSF52540 294 447 4.3E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS04045 8bf6c4585e23a29bc20b7fa70d566043 464 Pfam PF00772 DnaB-like helicase N terminal domain 19 120 2.1E-37 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CVS42_RS04045 8bf6c4585e23a29bc20b7fa70d566043 464 Pfam PF03796 DnaB-like helicase C terminal domain 198 454 8.9E-112 T 29-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CVS42_RS04110 d568d13556794e08ce20414c3be84def 701 Gene3D G3DSA:2.40.170.20 160 701 3.0E-67 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS04110 d568d13556794e08ce20414c3be84def 701 SUPERFAMILY SSF56935 27 701 1.17E-117 T 29-03-2018 CVS42_RS04110 d568d13556794e08ce20414c3be84def 701 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 31 701 2.7E-125 T 29-03-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 CVS42_RS04110 d568d13556794e08ce20414c3be84def 701 Pfam PF00593 TonB dependent receptor 245 699 5.4E-59 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS04110 d568d13556794e08ce20414c3be84def 701 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 149 4.4E-29 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS04110 d568d13556794e08ce20414c3be84def 701 Gene3D G3DSA:2.170.130.10 21 155 9.8E-36 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS04110 d568d13556794e08ce20414c3be84def 701 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 35 701 9.0E-127 T 29-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 CVS42_RS06775 938a95a4ac189df9859d5942b9f38bd6 267 Pfam PF08021 Siderophore-interacting FAD-binding domain 15 129 1.2E-37 T 29-03-2018 IPR013113 FAD-binding 9, siderophore-interacting CVS42_RS06775 938a95a4ac189df9859d5942b9f38bd6 267 Gene3D G3DSA:2.40.30.10 4 129 1.0E-32 T 29-03-2018 CVS42_RS06775 938a95a4ac189df9859d5942b9f38bd6 267 SUPERFAMILY SSF63380 5 133 3.4E-16 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CVS42_RS06775 938a95a4ac189df9859d5942b9f38bd6 267 Gene3D G3DSA:3.40.50.80 132 267 4.9E-34 T 29-03-2018 CVS42_RS06775 938a95a4ac189df9859d5942b9f38bd6 267 Pfam PF04954 Siderophore-interacting protein 136 251 4.0E-27 T 29-03-2018 IPR007037 Siderophore-interacting protein CVS42_RS16905 3b3d37473dd11d574ce6a210a32fac22 614 PIRSF PIRSF001217 8 614 2.3E-205 T 29-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CVS42_RS16905 3b3d37473dd11d574ce6a210a32fac22 614 SUPERFAMILY SSF52096 466 527 2.53E-42 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS16905 3b3d37473dd11d574ce6a210a32fac22 614 SUPERFAMILY SSF52096 314 438 2.53E-42 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS16905 3b3d37473dd11d574ce6a210a32fac22 614 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 15 607 4.4E-188 T 29-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CVS42_RS16905 3b3d37473dd11d574ce6a210a32fac22 614 SUPERFAMILY SSF52096 30 176 8.19E-24 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS16905 3b3d37473dd11d574ce6a210a32fac22 614 SUPERFAMILY SSF52096 207 284 8.19E-24 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS16905 3b3d37473dd11d574ce6a210a32fac22 614 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 348 538 1.4E-52 T 29-03-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 CVS42_RS16905 3b3d37473dd11d574ce6a210a32fac22 614 Pfam PF01343 Peptidase family S49 136 288 8.6E-33 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CVS42_RS16905 3b3d37473dd11d574ce6a210a32fac22 614 Pfam PF01343 Peptidase family S49 390 541 3.5E-46 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CVS42_RS16905 3b3d37473dd11d574ce6a210a32fac22 614 Gene3D G3DSA:3.90.226.10 317 610 1.4E-52 T 29-03-2018 CVS42_RS16905 3b3d37473dd11d574ce6a210a32fac22 614 Gene3D G3DSA:3.90.226.10 52 312 4.9E-26 T 29-03-2018 CVS42_RS09660 ad4e9a7b5786f8ab524d5499241d15b6 550 SMART SM00267 191 353 7.5E-25 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS09660 ad4e9a7b5786f8ab524d5499241d15b6 550 Gene3D G3DSA:3.30.70.270 197 370 1.7E-35 T 29-03-2018 CVS42_RS09660 ad4e9a7b5786f8ab524d5499241d15b6 550 SUPERFAMILY SSF55073 207 354 1.26E-27 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS09660 ad4e9a7b5786f8ab524d5499241d15b6 550 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 200 350 5.3E-23 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS09660 ad4e9a7b5786f8ab524d5499241d15b6 550 Pfam PF00990 Diguanylate cyclase, GGDEF domain 202 346 2.2E-30 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS20465 ce66d75cdc095a08ca2a8b31e0a66fc8 851 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 26 720 1.5E-209 T 29-03-2018 IPR011853 TRAP transporter, 4TM/12TM fusion protein CVS42_RS20465 ce66d75cdc095a08ca2a8b31e0a66fc8 851 Pfam PF11874 Domain of unknown function (DUF3394) 669 847 4.5E-73 T 29-03-2018 IPR021814 Protein of unknown function DUF3394 CVS42_RS20465 ce66d75cdc095a08ca2a8b31e0a66fc8 851 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 664 2.4E-76 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CVS42_RS07900 4e8f509e399b879856181ce6e30a1fdc 474 Pfam PF01593 Flavin containing amine oxidoreductase 17 280 5.9E-20 T 29-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CVS42_RS07900 4e8f509e399b879856181ce6e30a1fdc 474 PRINTS PR00419 Adrenodoxin reductase family signature 31 44 3.5E-9 T 29-03-2018 CVS42_RS07900 4e8f509e399b879856181ce6e30a1fdc 474 PRINTS PR00419 Adrenodoxin reductase family signature 8 30 3.5E-9 T 29-03-2018 CVS42_RS07900 4e8f509e399b879856181ce6e30a1fdc 474 SUPERFAMILY SSF51905 7 309 2.2E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS07900 4e8f509e399b879856181ce6e30a1fdc 474 SUPERFAMILY SSF51905 415 449 2.2E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS07900 4e8f509e399b879856181ce6e30a1fdc 474 Gene3D G3DSA:3.40.50.720 5 455 1.3E-31 T 29-03-2018 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 SUPERFAMILY SSF53732 2 464 5.89E-167 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 3.8E-257 T 29-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 Gene3D G3DSA:3.30.499.10 325 465 7.9E-53 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 PRINTS PR00415 Aconitase family signature 133 148 1.6E-49 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 PRINTS PR00415 Aconitase family signature 399 412 1.6E-49 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 PRINTS PR00415 Aconitase family signature 108 116 1.6E-49 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 PRINTS PR00415 Aconitase family signature 119 132 1.6E-49 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 PRINTS PR00415 Aconitase family signature 209 222 1.6E-49 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 PRINTS PR00415 Aconitase family signature 286 300 1.6E-49 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 PRINTS PR00415 Aconitase family signature 82 95 1.6E-49 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 PRINTS PR00415 Aconitase family signature 195 208 1.6E-49 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 PRINTS PR00415 Aconitase family signature 343 354 1.6E-49 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 Gene3D G3DSA:3.30.499.10 1 152 3.1E-40 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 Gene3D G3DSA:3.40.1060.10 153 288 1.2E-43 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 465 60.005 T 29-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CVS42_RS17560 46cf1251b9221cb5665fd089b7a25a99 465 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 1.6E-160 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CVS42_RS05280 ba14b38d6cea504180fa744504994d01 210 SUPERFAMILY SSF53448 14 194 5.45E-36 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS05280 ba14b38d6cea504180fa744504994d01 210 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 15 195 1.1E-71 T 29-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CVS42_RS05280 ba14b38d6cea504180fa744504994d01 210 Gene3D G3DSA:3.90.550.10 12 207 1.1E-32 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS05280 ba14b38d6cea504180fa744504994d01 210 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 12 197 29.501 T 29-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CVS42_RS05280 ba14b38d6cea504180fa744504994d01 210 Pfam PF12804 MobA-like NTP transferase domain 16 164 2.9E-35 T 29-03-2018 IPR025877 MobA-like NTP transferase CVS42_RS12895 5b60d39798fba3bdfe885a246e314693 321 Pfam PF14397 Sugar-transfer associated ATP-grasp 24 297 4.2E-110 T 29-03-2018 CVS42_RS12895 5b60d39798fba3bdfe885a246e314693 321 Gene3D G3DSA:3.30.1490.20 43 151 5.9E-5 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CVS42_RS12895 5b60d39798fba3bdfe885a246e314693 321 SUPERFAMILY SSF56059 234 282 7.38E-16 T 29-03-2018 CVS42_RS12895 5b60d39798fba3bdfe885a246e314693 321 SUPERFAMILY SSF56059 43 204 7.38E-16 T 29-03-2018 CVS42_RS12895 5b60d39798fba3bdfe885a246e314693 321 Gene3D G3DSA:3.30.470.20 152 289 1.8E-14 T 29-03-2018 CVS42_RS12895 5b60d39798fba3bdfe885a246e314693 321 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 7 317 6.9E-143 T 29-03-2018 IPR011758 Alpha-L-glutamate ligase-related protein CVS42_RS10990 22be0e857a449d69bb7fdd16324f32f7 595 SUPERFAMILY SSF54631 155 265 1.57E-9 T 29-03-2018 CVS42_RS10990 22be0e857a449d69bb7fdd16324f32f7 595 Pfam PF03445 Putative nucleotidyltransferase DUF294 291 421 2.5E-35 T 29-03-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 CVS42_RS10990 22be0e857a449d69bb7fdd16324f32f7 595 SMART SM00100 11 126 8.8E-8 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CVS42_RS10990 22be0e857a449d69bb7fdd16324f32f7 595 Pfam PF00027 Cyclic nucleotide-binding domain 31 111 6.8E-9 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CVS42_RS10990 22be0e857a449d69bb7fdd16324f32f7 595 Gene3D G3DSA:3.10.580.10 130 274 4.5E-8 T 29-03-2018 CVS42_RS10990 22be0e857a449d69bb7fdd16324f32f7 595 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 459 591 1.1E-39 T 29-03-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding CVS42_RS10990 22be0e857a449d69bb7fdd16324f32f7 595 SUPERFAMILY SSF51206 10 132 1.57E-23 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CVS42_RS10990 22be0e857a449d69bb7fdd16324f32f7 595 Gene3D G3DSA:2.60.120.10 8 129 1.2E-19 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS10990 22be0e857a449d69bb7fdd16324f32f7 595 SMART SM00116 219 266 7.9E-4 T 29-03-2018 IPR000644 CBS domain CVS42_RS13090 c6865bb1f05eddd2486b9fa35c866f99 134 SUPERFAMILY SSF54593 1 131 9.87E-18 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS13090 c6865bb1f05eddd2486b9fa35c866f99 134 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 98 3.1E-12 T 29-03-2018 CVS42_RS13090 c6865bb1f05eddd2486b9fa35c866f99 134 Gene3D G3DSA:3.10.180.10 1 131 2.3E-16 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS05985 0234a9a0acc4f2d7759e98cd719c9860 327 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 127 250 3.7E-30 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CVS42_RS05985 0234a9a0acc4f2d7759e98cd719c9860 327 Gene3D G3DSA:3.40.50.300 65 275 1.1E-38 T 29-03-2018 CVS42_RS05985 0234a9a0acc4f2d7759e98cd719c9860 327 SUPERFAMILY SSF52540 83 321 2.96E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS05985 0234a9a0acc4f2d7759e98cd719c9860 327 SMART SM00382 123 255 2.2E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS16145 778444845846cc7d35c011ff5a4e1707 182 Hamap MF_01104 Protein Syd [syd]. 3 181 31.868 T 29-03-2018 IPR009948 Syd GO:0009898 CVS42_RS16145 778444845846cc7d35c011ff5a4e1707 182 Pfam PF07348 Syd protein (SUKH-2) 7 178 1.4E-55 T 29-03-2018 IPR009948 Syd GO:0009898 CVS42_RS16780 5f43a4ed3f78e46f57b237b4af83e8d0 417 Gene3D G3DSA:3.90.1150.10 276 416 6.6E-60 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS16780 5f43a4ed3f78e46f57b237b4af83e8d0 417 Pfam PF00464 Serine hydroxymethyltransferase 9 386 1.2E-184 T 29-03-2018 CVS42_RS16780 5f43a4ed3f78e46f57b237b4af83e8d0 417 SUPERFAMILY SSF53383 6 416 4.95E-185 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS16780 5f43a4ed3f78e46f57b237b4af83e8d0 417 Gene3D G3DSA:3.40.640.10 37 275 1.4E-52 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS16780 5f43a4ed3f78e46f57b237b4af83e8d0 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 29-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CVS42_RS16780 5f43a4ed3f78e46f57b237b4af83e8d0 417 PIRSF PIRSF000412 1 417 2.5E-172 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CVS42_RS16780 5f43a4ed3f78e46f57b237b4af83e8d0 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.795 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CVS42_RS03405 39e1d9dff6f675b7b24e63958c573bfa 156 Pfam PF04074 Domain of unknown function (DUF386) 1 149 2.8E-36 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CVS42_RS03405 39e1d9dff6f675b7b24e63958c573bfa 156 Gene3D G3DSA:2.60.120.370 1 153 2.9E-40 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CVS42_RS03405 39e1d9dff6f675b7b24e63958c573bfa 156 SUPERFAMILY SSF51197 1 153 8.51E-35 T 29-03-2018 CVS42_RS03405 39e1d9dff6f675b7b24e63958c573bfa 156 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 2.4E-32 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CVS42_RS10205 7b0022b8e6318be63147399bd7d73755 276 Gene3D G3DSA:3.40.190.10 137 248 0.0027 T 29-03-2018 CVS42_RS10205 7b0022b8e6318be63147399bd7d73755 276 Gene3D G3DSA:3.40.190.10 24 136 5.2E-19 T 29-03-2018 CVS42_RS10205 7b0022b8e6318be63147399bd7d73755 276 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 244 3.6E-18 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS10205 7b0022b8e6318be63147399bd7d73755 276 SUPERFAMILY SSF53850 21 247 3.09E-30 T 29-03-2018 CVS42_RS15465 add562e48d3fec6d520cd0e9f16945b6 465 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 374 394 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CVS42_RS15465 add562e48d3fec6d520cd0e9f16945b6 465 TIGRFAM TIGR03173 pbuX: xanthine permease 40 458 3.3E-135 T 29-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 CVS42_RS15465 add562e48d3fec6d520cd0e9f16945b6 465 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 31 456 8.4E-122 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CVS42_RS15465 add562e48d3fec6d520cd0e9f16945b6 465 Pfam PF00860 Permease family 35 426 6.2E-96 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CVS42_RS20025 7f848f06694bc182b24fd73ddddf32f4 207 Pfam PF13505 Outer membrane protein beta-barrel domain 18 207 5.7E-8 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel CVS42_RS20025 7f848f06694bc182b24fd73ddddf32f4 207 Gene3D G3DSA:2.40.160.20 11 207 7.0E-11 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS20025 7f848f06694bc182b24fd73ddddf32f4 207 SUPERFAMILY SSF56925 24 207 6.28E-11 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS16390 e87f9f5389fb58f2534d2831c7616eb5 390 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 5 86 2.7E-26 T 29-03-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 CVS42_RS16390 e87f9f5389fb58f2534d2831c7616eb5 390 Gene3D G3DSA:1.20.59.10 1 110 3.1E-26 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CVS42_RS16390 e87f9f5389fb58f2534d2831c7616eb5 390 PIRSF PIRSF001500 1 378 5.1E-127 T 29-03-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CVS42_RS16390 e87f9f5389fb58f2534d2831c7616eb5 390 Gene3D G3DSA:3.30.70.260 288 382 4.2E-27 T 29-03-2018 CVS42_RS16390 e87f9f5389fb58f2534d2831c7616eb5 390 Gene3D G3DSA:3.40.190.10 111 195 1.3E-29 T 29-03-2018 CVS42_RS16390 e87f9f5389fb58f2534d2831c7616eb5 390 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 323 330 - T 29-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CVS42_RS16390 e87f9f5389fb58f2534d2831c7616eb5 390 Pfam PF00800 Prephenate dehydratase 104 285 6.4E-55 T 29-03-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CVS42_RS16390 e87f9f5389fb58f2534d2831c7616eb5 390 Pfam PF01817 Chorismate mutase type II 8 86 2.7E-16 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CVS42_RS16390 e87f9f5389fb58f2534d2831c7616eb5 390 SMART SM00830 8 88 3.9E-24 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CVS42_RS16390 e87f9f5389fb58f2534d2831c7616eb5 390 SUPERFAMILY SSF53850 103 287 9.77E-51 T 29-03-2018 CVS42_RS16390 e87f9f5389fb58f2534d2831c7616eb5 390 SUPERFAMILY SSF48600 3 90 4.03E-20 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CVS42_RS16390 e87f9f5389fb58f2534d2831c7616eb5 390 SUPERFAMILY SSF55021 278 375 1.14E-24 T 29-03-2018 CVS42_RS16390 e87f9f5389fb58f2534d2831c7616eb5 390 Gene3D G3DSA:3.40.190.10 196 272 8.0E-21 T 29-03-2018 CVS42_RS16945 42fada60be3c186404606a909495bf29 851 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 163 1.2E-20 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS16945 42fada60be3c186404606a909495bf29 851 Gene3D G3DSA:2.40.170.20 174 851 4.9E-64 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS16945 42fada60be3c186404606a909495bf29 851 SUPERFAMILY SSF56935 612 656 4.4E-93 T 29-03-2018 CVS42_RS16945 42fada60be3c186404606a909495bf29 851 SUPERFAMILY SSF56935 30 223 4.4E-93 T 29-03-2018 CVS42_RS16945 42fada60be3c186404606a909495bf29 851 SUPERFAMILY SSF56935 683 851 4.4E-93 T 29-03-2018 CVS42_RS16945 42fada60be3c186404606a909495bf29 851 SUPERFAMILY SSF56935 289 576 4.4E-93 T 29-03-2018 CVS42_RS16945 42fada60be3c186404606a909495bf29 851 Pfam PF00593 TonB dependent receptor 358 846 2.3E-46 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS16945 42fada60be3c186404606a909495bf29 851 Gene3D G3DSA:2.170.130.10 26 173 1.8E-27 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS07395 27e799f14b3d8d3193eff757428ce620 246 SUPERFAMILY SSF161098 110 227 3.79E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS07395 27e799f14b3d8d3193eff757428ce620 246 SUPERFAMILY SSF161098 11 78 3.79E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS07395 27e799f14b3d8d3193eff757428ce620 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 74 1.5E-16 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CVS42_RS07395 27e799f14b3d8d3193eff757428ce620 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 238 8.9E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS07395 27e799f14b3d8d3193eff757428ce620 246 Gene3D G3DSA:1.10.3720.10 2 246 7.6E-41 T 29-03-2018 CVS42_RS09920 82e426d247bba666b6b1fdc030d315a1 353 Gene3D G3DSA:1.20.1170.10 93 277 0.0014 T 29-03-2018 CVS42_RS17140 05a9cfb78475c70a81bf9e619a2dba6f 155 SUPERFAMILY SSF53271 3 144 3.83E-26 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CVS42_RS17140 05a9cfb78475c70a81bf9e619a2dba6f 155 Pfam PF00156 Phosphoribosyl transferase domain 15 147 4.1E-12 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CVS42_RS17140 05a9cfb78475c70a81bf9e619a2dba6f 155 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 155 39.347 T 29-03-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 CVS42_RS17140 05a9cfb78475c70a81bf9e619a2dba6f 155 Gene3D G3DSA:3.40.50.2020 1 154 2.6E-21 T 29-03-2018 CVS42_RS21840 28ad050e5c837e0a731e2ffe8cc2eceb 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 4.0E-57 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CVS42_RS21840 28ad050e5c837e0a731e2ffe8cc2eceb 308 Gene3D G3DSA:1.10.3470.10 4 299 3.1E-48 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CVS42_RS07320 cec3dea541186dc3bf75393188fe96bf 266 SUPERFAMILY SSF53474 3 264 3.64E-58 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS07320 cec3dea541186dc3bf75393188fe96bf 266 PRINTS PR00412 Epoxide hydrolase signature 46 61 8.1E-10 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CVS42_RS07320 cec3dea541186dc3bf75393188fe96bf 266 PRINTS PR00412 Epoxide hydrolase signature 105 118 8.1E-10 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CVS42_RS07320 cec3dea541186dc3bf75393188fe96bf 266 PRINTS PR00412 Epoxide hydrolase signature 240 262 8.1E-10 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CVS42_RS07320 cec3dea541186dc3bf75393188fe96bf 266 Gene3D G3DSA:3.40.50.1820 6 264 1.3E-41 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS07320 cec3dea541186dc3bf75393188fe96bf 266 Pfam PF00561 alpha/beta hydrolase fold 22 120 2.3E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS07320 cec3dea541186dc3bf75393188fe96bf 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 4.8E-10 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS07320 cec3dea541186dc3bf75393188fe96bf 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 4.8E-10 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS07320 cec3dea541186dc3bf75393188fe96bf 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 210 224 4.8E-10 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS07320 cec3dea541186dc3bf75393188fe96bf 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 4.8E-10 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS10715 6aae7261aa14c85301c01f2383d0572b 423 Pfam PF13439 Glycosyltransferase Family 4 17 175 9.8E-15 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CVS42_RS10715 6aae7261aa14c85301c01f2383d0572b 423 Pfam PF00534 Glycosyl transferases group 1 189 347 4.7E-29 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CVS42_RS10715 6aae7261aa14c85301c01f2383d0572b 423 SUPERFAMILY SSF53756 6 366 5.65E-62 T 29-03-2018 CVS42_RS10715 6aae7261aa14c85301c01f2383d0572b 423 Gene3D G3DSA:3.40.50.2000 2 176 5.3E-10 T 29-03-2018 CVS42_RS10715 6aae7261aa14c85301c01f2383d0572b 423 Gene3D G3DSA:3.40.50.2000 177 353 3.6E-39 T 29-03-2018 CVS42_RS20275 8026c397ffea78d2f222928d038a02c4 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 1.2E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS20275 8026c397ffea78d2f222928d038a02c4 144 SUPERFAMILY SSF54523 7 110 1.41E-14 T 29-03-2018 CVS42_RS20275 8026c397ffea78d2f222928d038a02c4 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 3.5E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS20275 8026c397ffea78d2f222928d038a02c4 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS20275 8026c397ffea78d2f222928d038a02c4 144 Gene3D G3DSA:3.30.700.10 7 143 1.4E-18 T 29-03-2018 CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 SUPERFAMILY SSF47005 317 362 2.22E-13 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 Pfam PF00364 Biotin-requiring enzyme 3 73 2.8E-19 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 Pfam PF00364 Biotin-requiring enzyme 204 274 6.9E-22 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 Pfam PF00364 Biotin-requiring enzyme 104 173 1.9E-18 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 SUPERFAMILY SSF51230 103 192 4.84E-21 T 29-03-2018 IPR011053 Single hybrid motif CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 Gene3D G3DSA:3.30.559.10 385 629 3.5E-79 T 29-03-2018 CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 125 154 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 398 628 7.4E-79 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 SUPERFAMILY SSF51230 203 291 9.03E-23 T 29-03-2018 IPR011053 Single hybrid motif CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 Gene3D G3DSA:4.10.320.10 322 377 1.2E-19 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 Gene3D G3DSA:2.40.50.100 261 321 3.1E-6 T 29-03-2018 CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 Gene3D G3DSA:2.40.50.100 198 260 1.9E-14 T 29-03-2018 CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 Gene3D G3DSA:2.40.50.100 145 197 1.5E-6 T 29-03-2018 CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 SUPERFAMILY SSF51230 2 84 4.11E-21 T 29-03-2018 IPR011053 Single hybrid motif CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 Gene3D G3DSA:3.90.1170.30 1 43 1.6E-7 T 29-03-2018 CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 Gene3D G3DSA:3.90.1170.30 44 144 8.7E-20 T 29-03-2018 CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 Pfam PF02817 e3 binding domain 323 358 4.8E-16 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 SUPERFAMILY SSF52777 387 628 8.01E-81 T 29-03-2018 CVS42_RS18685 b1ccef3582a0dad9df51965aae2eacfa 629 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 189 629 1.5E-207 T 29-03-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 CVS42_RS18030 3aa0a763104bb51764a19677c75a5264 56 TIGRFAM TIGR03510 XapX: XapX domain 3 50 3.7E-20 T 29-03-2018 IPR020017 XapX domain CVS42_RS22175 eb0d7fa2bc283b46dc05d99e99972b7c 188 PRINTS PR00369 Flavodoxin signature 147 166 5.4E-8 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CVS42_RS22175 eb0d7fa2bc283b46dc05d99e99972b7c 188 PRINTS PR00369 Flavodoxin signature 92 103 5.4E-8 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CVS42_RS22175 eb0d7fa2bc283b46dc05d99e99972b7c 188 PRINTS PR00369 Flavodoxin signature 123 133 5.4E-8 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CVS42_RS22175 eb0d7fa2bc283b46dc05d99e99972b7c 188 PRINTS PR00369 Flavodoxin signature 44 57 5.4E-8 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CVS42_RS22175 eb0d7fa2bc283b46dc05d99e99972b7c 188 SUPERFAMILY SSF52218 39 187 5.33E-43 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS22175 eb0d7fa2bc283b46dc05d99e99972b7c 188 Gene3D G3DSA:3.40.50.360 28 188 4.4E-35 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS22175 eb0d7fa2bc283b46dc05d99e99972b7c 188 Pfam PF00258 Flavodoxin 46 179 1.7E-25 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CVS42_RS12115 cb9681d7040f7307294a83b4fbe05e77 461 SUPERFAMILY SSF142019 34 258 8.24E-86 T 29-03-2018 CVS42_RS12115 cb9681d7040f7307294a83b4fbe05e77 461 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 355 437 2.0E-24 T 29-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12115 cb9681d7040f7307294a83b4fbe05e77 461 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 68 240 7.8E-51 T 29-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12115 cb9681d7040f7307294a83b4fbe05e77 461 SUPERFAMILY SSF140490 349 443 4.71E-30 T 29-03-2018 CVS42_RS12115 cb9681d7040f7307294a83b4fbe05e77 461 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 188 203 - T 29-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12115 cb9681d7040f7307294a83b4fbe05e77 461 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 27 439 2.7E-194 T 29-03-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12115 cb9681d7040f7307294a83b4fbe05e77 461 SMART SM00928 352 397 2.6E-20 T 29-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12115 cb9681d7040f7307294a83b4fbe05e77 461 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 365 376 - T 29-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12115 cb9681d7040f7307294a83b4fbe05e77 461 SUPERFAMILY SSF142984 264 347 1.01E-18 T 29-03-2018 CVS42_RS12115 cb9681d7040f7307294a83b4fbe05e77 461 Pfam PF10531 SLBB domain 269 315 1.4E-7 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS05155 270ce8f1cb39acfa1090f8d01a7a2b0b 517 Pfam PF08447 PAS fold 32 115 1.0E-18 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CVS42_RS05155 270ce8f1cb39acfa1090f8d01a7a2b0b 517 SMART SM00283 256 517 4.2E-51 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS05155 270ce8f1cb39acfa1090f8d01a7a2b0b 517 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 303 483 2.3E-39 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS05155 270ce8f1cb39acfa1090f8d01a7a2b0b 517 SUPERFAMILY SSF55785 22 115 1.03E-28 T 29-03-2018 IPR000014 PAS domain CVS42_RS05155 270ce8f1cb39acfa1090f8d01a7a2b0b 517 Gene3D G3DSA:1.10.287.950 285 489 4.7E-51 T 29-03-2018 CVS42_RS05155 270ce8f1cb39acfa1090f8d01a7a2b0b 517 SUPERFAMILY SSF58104 262 516 9.16E-67 T 29-03-2018 CVS42_RS05155 270ce8f1cb39acfa1090f8d01a7a2b0b 517 Gene3D G3DSA:1.10.287.950 228 284 0.0022 T 29-03-2018 CVS42_RS05155 270ce8f1cb39acfa1090f8d01a7a2b0b 517 Gene3D G3DSA:3.40.50.10600 4 120 1.4E-30 T 29-03-2018 CVS42_RS05155 270ce8f1cb39acfa1090f8d01a7a2b0b 517 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 109 3.5E-16 T 29-03-2018 IPR000014 PAS domain CVS42_RS18975 0d598763999d2e38ce7ee8bfca16593a 91 Pfam PF04316 Anti-sigma-28 factor, FlgM 36 87 9.5E-11 T 29-03-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CVS42_RS18975 0d598763999d2e38ce7ee8bfca16593a 91 SUPERFAMILY SSF101498 1 88 1.19E-12 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CVS42_RS18975 0d598763999d2e38ce7ee8bfca16593a 91 Gene3D G3DSA:1.10.287.1160 59 87 4.3E-5 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CVS42_RS18975 0d598763999d2e38ce7ee8bfca16593a 91 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 89 1.5E-17 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CVS42_RS09180 59150e2c8faebbc0faf6b6b0004bb695 251 Gene3D G3DSA:3.20.20.70 1 251 1.7E-96 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS09180 59150e2c8faebbc0faf6b6b0004bb695 251 Pfam PF00121 Triosephosphate isomerase 5 246 8.1E-86 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS09180 59150e2c8faebbc0faf6b6b0004bb695 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 38.871 T 29-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS09180 59150e2c8faebbc0faf6b6b0004bb695 251 SUPERFAMILY SSF51351 1 247 5.11E-90 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS09180 59150e2c8faebbc0faf6b6b0004bb695 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 3.5E-69 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS09180 59150e2c8faebbc0faf6b6b0004bb695 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 29-03-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS17945 5a1218e5f10a82ce868dd705aad026da 128 Gene3D G3DSA:3.30.70.60 1 100 1.3E-30 T 29-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CVS42_RS17945 5a1218e5f10a82ce868dd705aad026da 128 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.948 T 29-03-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CVS42_RS17945 5a1218e5f10a82ce868dd705aad026da 128 Pfam PF01250 Ribosomal protein S6 3 91 2.1E-28 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17945 5a1218e5f10a82ce868dd705aad026da 128 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 4.2E-38 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17945 5a1218e5f10a82ce868dd705aad026da 128 SUPERFAMILY SSF54995 1 103 7.19E-38 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS05730 ab8878a4ddd9c13f5e9872c2f5c4eb63 523 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 460 477 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CVS42_RS05730 ab8878a4ddd9c13f5e9872c2f5c4eb63 523 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 7 521 1.0E-272 T 29-03-2018 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 KEGG: 00230+2.7.1.20|KEGG: 00500+2.7.1.208|MetaCyc: PWY-6619 CVS42_RS05730 ab8878a4ddd9c13f5e9872c2f5c4eb63 523 Pfam PF02378 Phosphotransferase system, EIIC 18 358 1.2E-81 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CVS42_RS05730 ab8878a4ddd9c13f5e9872c2f5c4eb63 523 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 418 507 1.8E-22 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CVS42_RS05730 ab8878a4ddd9c13f5e9872c2f5c4eb63 523 Pfam PF00367 phosphotransferase system, EIIB 451 482 1.4E-12 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CVS42_RS05730 ab8878a4ddd9c13f5e9872c2f5c4eb63 523 Gene3D G3DSA:3.30.1360.60 448 521 1.6E-24 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CVS42_RS05730 ab8878a4ddd9c13f5e9872c2f5c4eb63 523 SUPERFAMILY SSF55604 450 522 4.18E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CVS42_RS19115 d27eec38ef463423a2cdefc784aa8e99 142 Pfam PF00572 Ribosomal protein L13 15 138 2.0E-56 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CVS42_RS19115 d27eec38ef463423a2cdefc784aa8e99 142 SUPERFAMILY SSF52161 1 140 1.44E-59 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CVS42_RS19115 d27eec38ef463423a2cdefc784aa8e99 142 PIRSF PIRSF002181 1 142 7.0E-51 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CVS42_RS19115 d27eec38ef463423a2cdefc784aa8e99 142 Gene3D G3DSA:3.90.1180.10 1 142 1.8E-61 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CVS42_RS19115 d27eec38ef463423a2cdefc784aa8e99 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 3.0E-65 T 29-03-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS19115 d27eec38ef463423a2cdefc784aa8e99 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 29-03-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 CVS42_RS19115 d27eec38ef463423a2cdefc784aa8e99 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.246 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CVS42_RS19345 a63cf05db339b602ea70a2e34fe041eb 315 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 237 253 - T 29-03-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CVS42_RS19345 a63cf05db339b602ea70a2e34fe041eb 315 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 11 303 40.076 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CVS42_RS19345 a63cf05db339b602ea70a2e34fe041eb 315 SUPERFAMILY SSF54782 227 313 1.7E-28 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CVS42_RS19345 a63cf05db339b602ea70a2e34fe041eb 315 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 233 301 1.1E-20 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CVS42_RS19345 a63cf05db339b602ea70a2e34fe041eb 315 PIRSF PIRSF001438 1 315 2.3E-124 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CVS42_RS19345 a63cf05db339b602ea70a2e34fe041eb 315 SUPERFAMILY SSF53850 10 225 5.09E-87 T 29-03-2018 CVS42_RS19345 a63cf05db339b602ea70a2e34fe041eb 315 Gene3D G3DSA:3.40.190.10 2 112 2.0E-47 T 29-03-2018 CVS42_RS19345 a63cf05db339b602ea70a2e34fe041eb 315 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 12 218 8.9E-81 T 29-03-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CVS42_RS19345 a63cf05db339b602ea70a2e34fe041eb 315 Gene3D G3DSA:3.30.160.40 227 312 2.6E-26 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CVS42_RS19345 a63cf05db339b602ea70a2e34fe041eb 315 PRINTS PR00151 Porphobilinogen deaminase signature 236 253 2.2E-50 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CVS42_RS19345 a63cf05db339b602ea70a2e34fe041eb 315 PRINTS PR00151 Porphobilinogen deaminase signature 130 147 2.2E-50 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CVS42_RS19345 a63cf05db339b602ea70a2e34fe041eb 315 PRINTS PR00151 Porphobilinogen deaminase signature 51 71 2.2E-50 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CVS42_RS19345 a63cf05db339b602ea70a2e34fe041eb 315 PRINTS PR00151 Porphobilinogen deaminase signature 149 166 2.2E-50 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CVS42_RS19345 a63cf05db339b602ea70a2e34fe041eb 315 PRINTS PR00151 Porphobilinogen deaminase signature 82 101 2.2E-50 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CVS42_RS19345 a63cf05db339b602ea70a2e34fe041eb 315 Gene3D G3DSA:3.40.190.10 113 205 1.9E-38 T 29-03-2018 CVS42_RS19345 a63cf05db339b602ea70a2e34fe041eb 315 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 12 303 1.2E-115 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CVS42_RS05665 9acab03e984b452b2b267b567c929876 456 Gene3D G3DSA:1.10.275.10 1 117 2.9E-43 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CVS42_RS05665 9acab03e984b452b2b267b567c929876 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.6E-52 T 29-03-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 CVS42_RS05665 9acab03e984b452b2b267b567c929876 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CVS42_RS05665 9acab03e984b452b2b267b567c929876 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 454 2.1E-147 T 29-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CVS42_RS05665 9acab03e984b452b2b267b567c929876 456 Gene3D G3DSA:1.20.200.10 118 390 9.5E-86 T 29-03-2018 CVS42_RS05665 9acab03e984b452b2b267b567c929876 456 Pfam PF00206 Lyase 14 312 2.3E-73 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal CVS42_RS05665 9acab03e984b452b2b267b567c929876 456 Gene3D G3DSA:1.10.40.30 391 445 2.0E-31 T 29-03-2018 CVS42_RS05665 9acab03e984b452b2b267b567c929876 456 SUPERFAMILY SSF48557 4 446 5.5E-105 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CVS42_RS05665 9acab03e984b452b2b267b567c929876 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 1.9E-17 T 29-03-2018 IPR000362 Fumarate lyase family CVS42_RS05665 9acab03e984b452b2b267b567c929876 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.9E-17 T 29-03-2018 IPR000362 Fumarate lyase family CVS42_RS05665 9acab03e984b452b2b267b567c929876 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 1.9E-17 T 29-03-2018 IPR000362 Fumarate lyase family CVS42_RS05665 9acab03e984b452b2b267b567c929876 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.9E-17 T 29-03-2018 IPR000362 Fumarate lyase family CVS42_RS05470 4583d4391c1c2bf236442ef2666cca69 274 PRINTS PR01003 Flagellar assembly protein FliH signature 110 128 5.8E-12 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CVS42_RS05470 4583d4391c1c2bf236442ef2666cca69 274 PRINTS PR01003 Flagellar assembly protein FliH signature 129 148 5.8E-12 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CVS42_RS05470 4583d4391c1c2bf236442ef2666cca69 274 PRINTS PR01003 Flagellar assembly protein FliH signature 219 235 5.8E-12 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CVS42_RS05470 4583d4391c1c2bf236442ef2666cca69 274 PRINTS PR01003 Flagellar assembly protein FliH signature 149 166 5.8E-12 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CVS42_RS05470 4583d4391c1c2bf236442ef2666cca69 274 PRINTS PR01003 Flagellar assembly protein FliH signature 87 109 5.8E-12 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CVS42_RS05470 4583d4391c1c2bf236442ef2666cca69 274 Pfam PF02108 Flagellar assembly protein FliH 127 254 8.8E-33 T 29-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CVS42_RS10515 5e5ce806e7639b035559e0f658207577 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 368 4.9E-204 T 29-03-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS10515 5e5ce806e7639b035559e0f658207577 370 SMART SM00859 3 122 8.9E-28 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CVS42_RS10515 5e5ce806e7639b035559e0f658207577 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 354 6.1E-59 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CVS42_RS10515 5e5ce806e7639b035559e0f658207577 370 SUPERFAMILY SSF55347 134 355 3.74E-77 T 29-03-2018 CVS42_RS10515 5e5ce806e7639b035559e0f658207577 370 SUPERFAMILY SSF51735 1 147 8.6E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS10515 5e5ce806e7639b035559e0f658207577 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 122 1.5E-23 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CVS42_RS10515 5e5ce806e7639b035559e0f658207577 370 Gene3D G3DSA:3.30.360.10 145 351 1.5E-59 T 29-03-2018 CVS42_RS10515 5e5ce806e7639b035559e0f658207577 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 34.2 T 29-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS10515 5e5ce806e7639b035559e0f658207577 370 PIRSF PIRSF000148 1 370 5.3E-68 T 29-03-2018 CVS42_RS10515 5e5ce806e7639b035559e0f658207577 370 Gene3D G3DSA:3.40.50.720 1 144 2.8E-19 T 29-03-2018 CVS42_RS10515 5e5ce806e7639b035559e0f658207577 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 29-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CVS42_RS17580 c395dd468735a5329691cf6b203092c9 326 SUPERFAMILY SSF53850 21 320 2.32E-64 T 29-03-2018 CVS42_RS17580 c395dd468735a5329691cf6b203092c9 326 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 13 326 1.2E-145 T 29-03-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 CVS42_RS17580 c395dd468735a5329691cf6b203092c9 326 Gene3D G3DSA:3.40.190.10 19 165 8.6E-20 T 29-03-2018 CVS42_RS17580 c395dd468735a5329691cf6b203092c9 326 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 18 320 8.6E-135 T 29-03-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030288|GO:0030975 CVS42_RS17580 c395dd468735a5329691cf6b203092c9 326 Pfam PF13343 Bacterial extracellular solute-binding protein 74 287 6.7E-20 T 29-03-2018 CVS42_RS17580 c395dd468735a5329691cf6b203092c9 326 Gene3D G3DSA:3.40.190.10 166 299 1.2E-12 T 29-03-2018 CVS42_RS14565 c9714ecc5b54325c7042afc2bfc624a6 397 SUPERFAMILY SSF111369 53 302 2.22E-85 T 29-03-2018 CVS42_RS14565 c9714ecc5b54325c7042afc2bfc624a6 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 377 2.4E-86 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CVS42_RS14565 c9714ecc5b54325c7042afc2bfc624a6 397 Gene3D G3DSA:1.20.1600.10 50 389 3.4E-33 T 29-03-2018 CVS42_RS14565 c9714ecc5b54325c7042afc2bfc624a6 397 Pfam PF00529 HlyD membrane-fusion protein of T1SS 195 362 2.5E-7 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CVS42_RS14565 c9714ecc5b54325c7042afc2bfc624a6 397 Pfam PF13533 Biotin-lipoyl like 66 114 1.1E-12 T 29-03-2018 CVS42_RS03660 accfdc31eaddd7e6cfc6f56c084ddeb7 1054 SUPERFAMILY SSF81935 18 189 1.12E-62 T 29-03-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CVS42_RS03660 accfdc31eaddd7e6cfc6f56c084ddeb7 1054 Gene3D G3DSA:3.40.309.10 824 1014 7.1E-49 T 29-03-2018 CVS42_RS03660 accfdc31eaddd7e6cfc6f56c084ddeb7 1054 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 74 187 2.0E-45 T 29-03-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CVS42_RS03660 accfdc31eaddd7e6cfc6f56c084ddeb7 1054 Pfam PF01619 Proline dehydrogenase 197 489 3.7E-89 T 29-03-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 CVS42_RS03660 accfdc31eaddd7e6cfc6f56c084ddeb7 1054 Pfam PF00171 Aldehyde dehydrogenase family 576 1034 3.3E-119 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS03660 accfdc31eaddd7e6cfc6f56c084ddeb7 1054 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 526 1031 1.1E-211 T 29-03-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CVS42_RS03660 accfdc31eaddd7e6cfc6f56c084ddeb7 1054 Gene3D G3DSA:3.20.20.220 17 111 2.0E-12 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like CVS42_RS03660 accfdc31eaddd7e6cfc6f56c084ddeb7 1054 Gene3D G3DSA:3.20.20.220 112 528 1.7E-101 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like CVS42_RS03660 accfdc31eaddd7e6cfc6f56c084ddeb7 1054 PIRSF PIRSF000197 3 1049 0.0 T 29-03-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CVS42_RS03660 accfdc31eaddd7e6cfc6f56c084ddeb7 1054 Gene3D G3DSA:3.40.605.10 547 823 2.3E-78 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS03660 accfdc31eaddd7e6cfc6f56c084ddeb7 1054 SUPERFAMILY SSF51730 190 532 4.71E-111 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like CVS42_RS03660 accfdc31eaddd7e6cfc6f56c084ddeb7 1054 SUPERFAMILY SSF53720 549 1038 5.89E-133 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CVS42_RS03660 accfdc31eaddd7e6cfc6f56c084ddeb7 1054 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 835 846 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CVS42_RS00605 b8959e0ce31e01e6d6887698f8a762bf 474 Gene3D G3DSA:3.10.580.10 157 284 2.6E-15 T 29-03-2018 CVS42_RS00605 b8959e0ce31e01e6d6887698f8a762bf 474 Pfam PF00571 CBS domain 225 278 2.4E-6 T 29-03-2018 IPR000644 CBS domain CVS42_RS00605 b8959e0ce31e01e6d6887698f8a762bf 474 Gene3D G3DSA:1.10.357.20 301 474 6.1E-33 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CVS42_RS00605 b8959e0ce31e01e6d6887698f8a762bf 474 SUPERFAMILY SSF161093 302 473 6.02E-47 T 29-03-2018 CVS42_RS00605 b8959e0ce31e01e6d6887698f8a762bf 474 Pfam PF01769 Divalent cation transporter 345 466 2.7E-23 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CVS42_RS00605 b8959e0ce31e01e6d6887698f8a762bf 474 SMART SM00924 58 161 4.2E-30 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CVS42_RS00605 b8959e0ce31e01e6d6887698f8a762bf 474 SUPERFAMILY SSF158791 39 157 1.7E-22 T 29-03-2018 CVS42_RS00605 b8959e0ce31e01e6d6887698f8a762bf 474 SUPERFAMILY SSF54631 160 300 8.79E-25 T 29-03-2018 CVS42_RS00605 b8959e0ce31e01e6d6887698f8a762bf 474 Pfam PF03448 MgtE intracellular N domain 59 156 4.8E-21 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CVS42_RS00605 b8959e0ce31e01e6d6887698f8a762bf 474 Gene3D G3DSA:1.25.60.10 26 156 6.4E-16 T 29-03-2018 CVS42_RS00605 b8959e0ce31e01e6d6887698f8a762bf 474 TIGRFAM TIGR00400 mgtE: magnesium transporter 47 473 6.5E-72 T 29-03-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 CVS42_RS19635 1e313ce574bc32a999e52af946ec7c74 218 SUPERFAMILY SSF55120 6 215 3.84E-63 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS19635 1e313ce574bc32a999e52af946ec7c74 218 Gene3D G3DSA:3.30.2350.10 11 217 5.1E-60 T 29-03-2018 CVS42_RS19635 1e313ce574bc32a999e52af946ec7c74 218 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 10 215 5.8E-58 T 29-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS19635 1e313ce574bc32a999e52af946ec7c74 218 Pfam PF00849 RNA pseudouridylate synthase 20 165 1.8E-26 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS19395 71abab920cd0122cb8f2352b27ad24f0 303 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 75 86 3.3E-14 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CVS42_RS19395 71abab920cd0122cb8f2352b27ad24f0 303 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 152 165 3.3E-14 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CVS42_RS19395 71abab920cd0122cb8f2352b27ad24f0 303 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 125 142 3.3E-14 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CVS42_RS19395 71abab920cd0122cb8f2352b27ad24f0 303 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 46 268 7.3E-60 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CVS42_RS19395 71abab920cd0122cb8f2352b27ad24f0 303 Gene3D G3DSA:3.40.710.10 17 298 7.6E-46 T 29-03-2018 CVS42_RS19395 71abab920cd0122cb8f2352b27ad24f0 303 SUPERFAMILY SSF56601 1 284 6.1E-59 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CVS42_RS00070 af6d2f143c442b5228b6a33b45c110cf 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 116 5.3E-7 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CVS42_RS00070 af6d2f143c442b5228b6a33b45c110cf 125 SUPERFAMILY SSF54593 7 122 1.75E-23 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS00070 af6d2f143c442b5228b6a33b45c110cf 125 PIRSF PIRSF039020 1 122 1.4E-48 T 29-03-2018 IPR026275 Glyoxalase/dioxygenase/EhpR CVS42_RS00070 af6d2f143c442b5228b6a33b45c110cf 125 Gene3D G3DSA:3.10.180.10 5 125 6.2E-20 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS07350 c8df37a227fd33b6520e26cd9ab642d5 116 Gene3D G3DSA:3.40.30.10 1 116 9.1E-36 T 29-03-2018 CVS42_RS07350 c8df37a227fd33b6520e26cd9ab642d5 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 115 2.7E-43 T 29-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CVS42_RS07350 c8df37a227fd33b6520e26cd9ab642d5 116 SUPERFAMILY SSF52833 5 115 5.66E-32 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS07350 c8df37a227fd33b6520e26cd9ab642d5 116 Pfam PF03960 ArsC family 7 114 8.9E-19 T 29-03-2018 IPR006660 Arsenate reductase-like CVS42_RS18750 d69d06a8324629bf1be4992df23c78e9 64 Pfam PF03884 DNA gyrase inhibitor YacG 5 51 7.1E-25 T 29-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CVS42_RS18750 d69d06a8324629bf1be4992df23c78e9 64 Gene3D G3DSA:3.30.50.10 2 63 6.6E-24 T 29-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 CVS42_RS18750 d69d06a8324629bf1be4992df23c78e9 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 59 18.864 T 29-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CVS42_RS18750 d69d06a8324629bf1be4992df23c78e9 64 SUPERFAMILY SSF57716 2 52 4.56E-20 T 29-03-2018 CVS42_RS17930 cf2d019ca2c1ccae86daa1d9e076c832 246 Gene3D G3DSA:2.40.30.10 1 94 3.2E-14 T 29-03-2018 CVS42_RS17930 cf2d019ca2c1ccae86daa1d9e076c832 246 Gene3D G3DSA:3.40.50.80 96 246 2.3E-23 T 29-03-2018 CVS42_RS17930 cf2d019ca2c1ccae86daa1d9e076c832 246 SUPERFAMILY SSF52343 102 246 3.27E-33 T 29-03-2018 CVS42_RS17930 cf2d019ca2c1ccae86daa1d9e076c832 246 SUPERFAMILY SSF63380 2 98 4.48E-20 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CVS42_RS17930 cf2d019ca2c1ccae86daa1d9e076c832 246 Pfam PF00175 Oxidoreductase NAD-binding domain 110 221 3.5E-14 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CVS42_RS18070 dfcb24784eb463e23eb3dc16e915a4d0 540 Pfam PF00795 Carbon-nitrogen hydrolase 10 240 7.1E-20 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CVS42_RS18070 dfcb24784eb463e23eb3dc16e915a4d0 540 TIGRFAM TIGR00552 nadE: NAD+ synthetase 266 511 1.3E-59 T 29-03-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 CVS42_RS18070 dfcb24784eb463e23eb3dc16e915a4d0 540 Gene3D G3DSA:3.60.110.10 1 252 2.3E-54 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CVS42_RS18070 dfcb24784eb463e23eb3dc16e915a4d0 540 Gene3D G3DSA:3.40.50.620 261 540 3.3E-65 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS18070 dfcb24784eb463e23eb3dc16e915a4d0 540 SUPERFAMILY SSF52402 250 520 9.7E-78 T 29-03-2018 CVS42_RS18070 dfcb24784eb463e23eb3dc16e915a4d0 540 Pfam PF02540 NAD synthase 264 512 3.6E-71 T 29-03-2018 IPR022310 NAD/GMP synthase CVS42_RS18070 dfcb24784eb463e23eb3dc16e915a4d0 540 SUPERFAMILY SSF56317 7 242 1.57E-55 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CVS42_RS18070 dfcb24784eb463e23eb3dc16e915a4d0 540 PIRSF PIRSF006630 240 539 1.5E-123 T 29-03-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CVS42_RS18070 dfcb24784eb463e23eb3dc16e915a4d0 540 PIRSF PIRSF006630 2 250 2.3E-72 T 29-03-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CVS42_RS05375 5a983e7c0a4e5e55143945c95a8f3dd3 571 ProSitePatterns PS00331 Malic enzymes signature. 274 290 - T 29-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CVS42_RS05375 5a983e7c0a4e5e55143945c95a8f3dd3 571 PIRSF PIRSF000106 1 571 1.1E-216 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS05375 5a983e7c0a4e5e55143945c95a8f3dd3 571 Pfam PF00390 Malic enzyme, N-terminal domain 88 268 7.2E-70 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CVS42_RS05375 5a983e7c0a4e5e55143945c95a8f3dd3 571 Gene3D G3DSA:3.40.50.10380 22 275 1.9E-103 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CVS42_RS05375 5a983e7c0a4e5e55143945c95a8f3dd3 571 PRINTS PR00072 Malic enzyme signature 154 183 9.1E-70 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS05375 5a983e7c0a4e5e55143945c95a8f3dd3 571 PRINTS PR00072 Malic enzyme signature 249 267 9.1E-70 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS05375 5a983e7c0a4e5e55143945c95a8f3dd3 571 PRINTS PR00072 Malic enzyme signature 190 212 9.1E-70 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS05375 5a983e7c0a4e5e55143945c95a8f3dd3 571 PRINTS PR00072 Malic enzyme signature 274 290 9.1E-70 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS05375 5a983e7c0a4e5e55143945c95a8f3dd3 571 PRINTS PR00072 Malic enzyme signature 416 432 9.1E-70 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS05375 5a983e7c0a4e5e55143945c95a8f3dd3 571 PRINTS PR00072 Malic enzyme signature 94 118 9.1E-70 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS05375 5a983e7c0a4e5e55143945c95a8f3dd3 571 PRINTS PR00072 Malic enzyme signature 305 321 9.1E-70 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CVS42_RS05375 5a983e7c0a4e5e55143945c95a8f3dd3 571 SUPERFAMILY SSF51735 278 570 6.56E-87 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS05375 5a983e7c0a4e5e55143945c95a8f3dd3 571 SMART SM01274 88 268 3.0E-96 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CVS42_RS05375 5a983e7c0a4e5e55143945c95a8f3dd3 571 Gene3D G3DSA:3.40.50.720 276 571 1.9E-95 T 29-03-2018 CVS42_RS05375 5a983e7c0a4e5e55143945c95a8f3dd3 571 SUPERFAMILY SSF53223 9 277 4.17E-101 T 29-03-2018 CVS42_RS05375 5a983e7c0a4e5e55143945c95a8f3dd3 571 SMART SM00919 278 539 4.5E-111 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CVS42_RS05375 5a983e7c0a4e5e55143945c95a8f3dd3 571 Pfam PF03949 Malic enzyme, NAD binding domain 278 537 8.8E-93 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CVS42_RS00645 fc76db802112f5dcdf9da539000dd9e2 281 SUPERFAMILY SSF110997 203 278 1.22E-14 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CVS42_RS00645 fc76db802112f5dcdf9da539000dd9e2 281 Pfam PF05036 Sporulation related domain 204 277 4.4E-13 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CVS42_RS00645 fc76db802112f5dcdf9da539000dd9e2 281 Gene3D G3DSA:3.30.70.1070 200 280 2.7E-13 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CVS42_RS19065 ae16ad547cce5e91ccbafed537518b63 635 Gene3D G3DSA:1.25.40.10 25 264 1.5E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS19065 ae16ad547cce5e91ccbafed537518b63 635 Gene3D G3DSA:3.40.50.2300 439 587 3.9E-11 T 29-03-2018 CVS42_RS19065 ae16ad547cce5e91ccbafed537518b63 635 Gene3D G3DSA:3.40.50.2300 265 432 2.2E-22 T 29-03-2018 CVS42_RS19065 ae16ad547cce5e91ccbafed537518b63 635 Pfam PF04348 LppC putative lipoprotein 50 594 4.4E-115 T 29-03-2018 IPR007443 Penicillin-binding protein activator LpoA CVS42_RS19065 ae16ad547cce5e91ccbafed537518b63 635 SUPERFAMILY SSF53822 265 597 9.42E-68 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CVS42_RS14070 11f445875714abd4ed34ca143de36c60 362 Hamap MF_01694 Biotin synthase [bioB]. 13 321 42.249 T 29-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CVS42_RS14070 11f445875714abd4ed34ca143de36c60 362 Pfam PF04055 Radical SAM superfamily 58 206 6.4E-16 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS14070 11f445875714abd4ed34ca143de36c60 362 Gene3D G3DSA:3.20.20.70 12 323 2.8E-60 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS14070 11f445875714abd4ed34ca143de36c60 362 SMART SM00876 228 320 1.9E-49 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CVS42_RS14070 11f445875714abd4ed34ca143de36c60 362 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 228 318 3.6E-20 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CVS42_RS14070 11f445875714abd4ed34ca143de36c60 362 PIRSF PIRSF001619 2 326 8.6E-138 T 29-03-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CVS42_RS14070 11f445875714abd4ed34ca143de36c60 362 TIGRFAM TIGR00433 bioB: biotin synthase 23 318 4.6E-127 T 29-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CVS42_RS14070 11f445875714abd4ed34ca143de36c60 362 SUPERFAMILY SSF102114 13 323 1.96E-95 T 29-03-2018 CVS42_RS14070 11f445875714abd4ed34ca143de36c60 362 SMART SM00729 51 263 4.5E-40 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CVS42_RS00570 a45d1376a8e235b6b8a2ba7c18a1c15b 332 Gene3D G3DSA:3.40.50.2300 139 330 4.4E-47 T 29-03-2018 CVS42_RS00570 a45d1376a8e235b6b8a2ba7c18a1c15b 332 SUPERFAMILY SSF53822 44 268 2.56E-16 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CVS42_RS00570 a45d1376a8e235b6b8a2ba7c18a1c15b 332 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 28 321 1.1E-61 T 29-03-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 CVS42_RS00570 a45d1376a8e235b6b8a2ba7c18a1c15b 332 Gene3D G3DSA:3.40.50.2300 23 138 4.2E-37 T 29-03-2018 CVS42_RS14770 3cf6cebc47bb56f176ac472c7f5df8c3 587 PIRSF PIRSF001327 1 587 5.8E-266 T 29-03-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 CVS42_RS14770 3cf6cebc47bb56f176ac472c7f5df8c3 587 SUPERFAMILY SSF52540 7 290 3.83E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS14770 3cf6cebc47bb56f176ac472c7f5df8c3 587 Gene3D G3DSA:3.40.50.300 310 584 7.8E-48 T 29-03-2018 CVS42_RS14770 3cf6cebc47bb56f176ac472c7f5df8c3 587 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 8 572 2.7E-275 T 29-03-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 CVS42_RS14770 3cf6cebc47bb56f176ac472c7f5df8c3 587 SMART SM00382 8 227 0.64 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS14770 3cf6cebc47bb56f176ac472c7f5df8c3 587 SMART SM00382 327 520 0.038 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS14770 3cf6cebc47bb56f176ac472c7f5df8c3 587 SUPERFAMILY SSF52540 317 578 4.5E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS14770 3cf6cebc47bb56f176ac472c7f5df8c3 587 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 13 294 1.5E-80 T 29-03-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 CVS42_RS14770 3cf6cebc47bb56f176ac472c7f5df8c3 587 Gene3D G3DSA:3.40.50.300 3 295 4.5E-55 T 29-03-2018 CVS42_RS14770 3cf6cebc47bb56f176ac472c7f5df8c3 587 Pfam PF02374 Anion-transporting ATPase 330 477 4.7E-29 T 29-03-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 CVS42_RS14770 3cf6cebc47bb56f176ac472c7f5df8c3 587 Pfam PF02374 Anion-transporting ATPase 11 294 1.3E-75 T 29-03-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 CVS42_RS01190 8d4f5430adedfeb3000e34d077eb317b 129 SUPERFAMILY SSF53137 15 129 5.67E-48 T 29-03-2018 CVS42_RS01190 8d4f5430adedfeb3000e34d077eb317b 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 29-03-2018 IPR018102 Ribosomal S11, conserved site CVS42_RS01190 8d4f5430adedfeb3000e34d077eb317b 129 PIRSF PIRSF002131 1 129 1.0E-52 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CVS42_RS01190 8d4f5430adedfeb3000e34d077eb317b 129 Gene3D G3DSA:3.30.420.80 5 129 1.2E-45 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CVS42_RS01190 8d4f5430adedfeb3000e34d077eb317b 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.884 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CVS42_RS01190 8d4f5430adedfeb3000e34d077eb317b 129 Pfam PF00411 Ribosomal protein S11 19 128 1.0E-52 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CVS42_RS01190 8d4f5430adedfeb3000e34d077eb317b 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 7.7E-56 T 29-03-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS15040 48fdc4f605a76a966e2d12ecfa2a2e40 277 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 213 239 - T 29-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 CVS42_RS15040 48fdc4f605a76a966e2d12ecfa2a2e40 277 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 18 275 1.6E-70 T 29-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 CVS42_RS15040 48fdc4f605a76a966e2d12ecfa2a2e40 277 Gene3D G3DSA:2.30.42.10 88 277 4.6E-10 T 29-03-2018 CVS42_RS15040 48fdc4f605a76a966e2d12ecfa2a2e40 277 SUPERFAMILY SSF50156 178 275 4.47E-17 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CVS42_RS15040 48fdc4f605a76a966e2d12ecfa2a2e40 277 Pfam PF11356 Type II secretion system protein C 22 160 4.5E-40 T 29-03-2018 IPR024961 Type II secretion system protein C, N-terminal CVS42_RS15040 48fdc4f605a76a966e2d12ecfa2a2e40 277 PRINTS PR00810 Bacterial general secretion pathway protein C signature 229 239 6.7E-6 T 29-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 CVS42_RS15040 48fdc4f605a76a966e2d12ecfa2a2e40 277 PRINTS PR00810 Bacterial general secretion pathway protein C signature 97 106 6.7E-6 T 29-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 CVS42_RS11240 37de682c630cae8b7f3de740239d6338 197 Pfam PF07105 Protein of unknown function (DUF1367) 3 195 3.2E-68 T 29-03-2018 IPR009797 Protein of unknown function DUF1367 CVS42_RS18460 a5135c7d7a91e9199ab7ded5df62cb1d 1344 SUPERFAMILY SSF49452 47 169 7.52E-22 T 29-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 CVS42_RS18460 a5135c7d7a91e9199ab7ded5df62cb1d 1344 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 305 389 3.1E-12 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 CVS42_RS18460 a5135c7d7a91e9199ab7ded5df62cb1d 1344 Pfam PF11852 Domain of unknown function (DUF3372) 911 1078 3.6E-46 T 29-03-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal CVS42_RS18460 a5135c7d7a91e9199ab7ded5df62cb1d 1344 Gene3D G3DSA:3.20.20.80 404 1014 9.0E-93 T 29-03-2018 CVS42_RS18460 a5135c7d7a91e9199ab7ded5df62cb1d 1344 Gene3D G3DSA:2.60.40.10 296 403 1.3E-19 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS18460 a5135c7d7a91e9199ab7ded5df62cb1d 1344 Gene3D G3DSA:2.60.40.10 1227 1339 2.2E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS18460 a5135c7d7a91e9199ab7ded5df62cb1d 1344 Gene3D G3DSA:2.60.40.10 1101 1221 2.7E-6 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS18460 a5135c7d7a91e9199ab7ded5df62cb1d 1344 SUPERFAMILY SSF51445 401 969 1.17E-138 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS18460 a5135c7d7a91e9199ab7ded5df62cb1d 1344 Gene3D G3DSA:2.60.40.1110 37 169 1.9E-19 T 29-03-2018 CVS42_RS18460 a5135c7d7a91e9199ab7ded5df62cb1d 1344 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 182 1079 0.0 T 29-03-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 CVS42_RS18460 a5135c7d7a91e9199ab7ded5df62cb1d 1344 SUPERFAMILY SSF81296 174 295 7.0E-30 T 29-03-2018 IPR014756 Immunoglobulin E-set CVS42_RS18460 a5135c7d7a91e9199ab7ded5df62cb1d 1344 Gene3D G3DSA:2.60.40.1180 1015 1090 3.5E-23 T 29-03-2018 CVS42_RS18460 a5135c7d7a91e9199ab7ded5df62cb1d 1344 Gene3D G3DSA:2.60.40.1130 174 283 2.1E-25 T 29-03-2018 CVS42_RS18460 a5135c7d7a91e9199ab7ded5df62cb1d 1344 SUPERFAMILY SSF51011 970 1091 1.58E-28 T 29-03-2018 CVS42_RS18460 a5135c7d7a91e9199ab7ded5df62cb1d 1344 Pfam PF03714 Bacterial pullanase-associated domain 78 168 5.5E-6 T 29-03-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 CVS42_RS18460 a5135c7d7a91e9199ab7ded5df62cb1d 1344 SUPERFAMILY SSF81296 305 407 4.9E-20 T 29-03-2018 IPR014756 Immunoglobulin E-set CVS42_RS02955 ceca1734cd0cffff6473f910e5140dfd 383 PIRSF PIRSF004810 1 383 1.8E-101 T 29-03-2018 IPR014047 Chromate transporter, long chain CVS42_RS02955 ceca1734cd0cffff6473f910e5140dfd 383 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 373 2.2E-81 T 29-03-2018 IPR014047 Chromate transporter, long chain CVS42_RS02955 ceca1734cd0cffff6473f910e5140dfd 383 Pfam PF02417 Chromate transporter 216 379 3.1E-32 T 29-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CVS42_RS02955 ceca1734cd0cffff6473f910e5140dfd 383 Pfam PF02417 Chromate transporter 3 166 2.8E-31 T 29-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CVS42_RS14145 5e0ce88c2e18467ebf1b3114109b624d 575 SMART SM01091 493 571 1.6E-13 T 29-03-2018 IPR005170 Transporter-associated domain CVS42_RS14145 5e0ce88c2e18467ebf1b3114109b624d 575 Gene3D G3DSA:3.30.465.10 489 573 3.8E-10 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CVS42_RS14145 5e0ce88c2e18467ebf1b3114109b624d 575 Pfam PF03471 Transporter associated domain 496 570 1.2E-10 T 29-03-2018 IPR005170 Transporter-associated domain CVS42_RS14145 5e0ce88c2e18467ebf1b3114109b624d 575 SUPERFAMILY SSF56176 498 568 1.28E-7 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CVS42_RS14145 5e0ce88c2e18467ebf1b3114109b624d 575 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 1.3E-54 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CVS42_RS14145 5e0ce88c2e18467ebf1b3114109b624d 575 Pfam PF02080 TrkA-C domain 422 484 2.4E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS14145 5e0ce88c2e18467ebf1b3114109b624d 575 SUPERFAMILY SSF116726 409 485 5.62E-12 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS14145 5e0ce88c2e18467ebf1b3114109b624d 575 Gene3D G3DSA:3.30.70.1450 387 488 7.8E-12 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS14145 5e0ce88c2e18467ebf1b3114109b624d 575 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 574 51.831 T 29-03-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 CVS42_RS04650 9f39a5b30eb7281395cb41068475c07e 249 Gene3D G3DSA:3.40.190.10 141 247 7.6E-5 T 29-03-2018 CVS42_RS04650 9f39a5b30eb7281395cb41068475c07e 249 SUPERFAMILY SSF53850 23 240 2.06E-20 T 29-03-2018 CVS42_RS04650 9f39a5b30eb7281395cb41068475c07e 249 Gene3D G3DSA:3.40.190.10 11 140 7.2E-8 T 29-03-2018 CVS42_RS20230 c8d2bb559bfef49d4fd666b225ee0900 195 Pfam PF02545 Maf-like protein 8 188 1.4E-56 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CVS42_RS20230 c8d2bb559bfef49d4fd666b225ee0900 195 PIRSF PIRSF006305 1 194 1.3E-50 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CVS42_RS20230 c8d2bb559bfef49d4fd666b225ee0900 195 Hamap MF_00528 Septum formation protein Maf [maf]. 8 194 30.592 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CVS42_RS20230 c8d2bb559bfef49d4fd666b225ee0900 195 SUPERFAMILY SSF52972 7 187 1.96E-59 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CVS42_RS20230 c8d2bb559bfef49d4fd666b225ee0900 195 TIGRFAM TIGR00172 maf: septum formation protein Maf 7 183 5.0E-53 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CVS42_RS20230 c8d2bb559bfef49d4fd666b225ee0900 195 Gene3D G3DSA:3.90.950.10 5 192 5.2E-65 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CVS42_RS21720 ce4c113d6409f7bfb72852b5ad66e62b 715 SUPERFAMILY SSF51735 315 496 1.54E-56 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS21720 ce4c113d6409f7bfb72852b5ad66e62b 715 SUPERFAMILY SSF52096 2 304 4.04E-69 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS21720 ce4c113d6409f7bfb72852b5ad66e62b 715 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 210 5.6E-42 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CVS42_RS21720 ce4c113d6409f7bfb72852b5ad66e62b 715 SUPERFAMILY SSF48179 496 602 1.96E-28 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CVS42_RS21720 ce4c113d6409f7bfb72852b5ad66e62b 715 Gene3D G3DSA:3.90.226.10 2 207 3.2E-51 T 29-03-2018 CVS42_RS21720 ce4c113d6409f7bfb72852b5ad66e62b 715 Gene3D G3DSA:1.10.1040.10 504 593 1.1E-21 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CVS42_RS21720 ce4c113d6409f7bfb72852b5ad66e62b 715 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 3.3E-59 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CVS42_RS21720 ce4c113d6409f7bfb72852b5ad66e62b 715 SUPERFAMILY SSF48179 626 715 9.35E-27 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CVS42_RS21720 ce4c113d6409f7bfb72852b5ad66e62b 715 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 29-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CVS42_RS21720 ce4c113d6409f7bfb72852b5ad66e62b 715 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 54.832 T 29-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CVS42_RS21720 ce4c113d6409f7bfb72852b5ad66e62b 715 Gene3D G3DSA:3.40.50.720 255 496 6.4E-59 T 29-03-2018 CVS42_RS21720 ce4c113d6409f7bfb72852b5ad66e62b 715 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 708 3.4E-7 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CVS42_RS21720 ce4c113d6409f7bfb72852b5ad66e62b 715 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 1.1E-24 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CVS42_RS21720 ce4c113d6409f7bfb72852b5ad66e62b 715 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 29-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CVS42_RS21720 ce4c113d6409f7bfb72852b5ad66e62b 715 Gene3D G3DSA:1.10.1040.10 623 714 2.9E-19 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CVS42_RS13255 07f59e5b09024e0316e16f8b6ce35f29 447 SUPERFAMILY SSF51556 54 375 3.89E-91 T 29-03-2018 IPR032466 Metal-dependent hydrolase CVS42_RS13255 07f59e5b09024e0316e16f8b6ce35f29 447 Gene3D G3DSA:3.20.20.140 69 394 2.5E-95 T 29-03-2018 CVS42_RS13255 07f59e5b09024e0316e16f8b6ce35f29 447 ProSitePatterns PS00483 Dihydroorotase signature 2. 310 321 - T 29-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS13255 07f59e5b09024e0316e16f8b6ce35f29 447 Gene3D G3DSA:2.30.40.10 2 68 1.6E-19 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS13255 07f59e5b09024e0316e16f8b6ce35f29 447 Pfam PF01979 Amidohydrolase family 51 427 1.4E-18 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CVS42_RS13255 07f59e5b09024e0316e16f8b6ce35f29 447 SUPERFAMILY SSF51338 1 53 3.11E-33 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS13255 07f59e5b09024e0316e16f8b6ce35f29 447 SUPERFAMILY SSF51338 374 438 3.11E-33 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS11090 09745559314ba354437d53699bbca226 64 Gene3D G3DSA:1.20.58.250 3 64 7.4E-15 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS11090 09745559314ba354437d53699bbca226 64 Pfam PF11686 Protein of unknown function (DUF3283) 4 61 2.6E-9 T 29-03-2018 IPR021700 Protein of unknown function DUF3283 CVS42_RS11090 09745559314ba354437d53699bbca226 64 SUPERFAMILY SSF46575 1 62 1.44E-5 T 29-03-2018 CVS42_RS06520 aed867d6477bdf0c5018c713e747fc89 569 Pfam PF01553 Acyltransferase 71 194 5.4E-9 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CVS42_RS06520 aed867d6477bdf0c5018c713e747fc89 569 Gene3D G3DSA:3.40.1130.10 47 284 1.8E-32 T 29-03-2018 CVS42_RS06520 aed867d6477bdf0c5018c713e747fc89 569 Gene3D G3DSA:3.40.630.30 305 474 3.8E-20 T 29-03-2018 CVS42_RS06520 aed867d6477bdf0c5018c713e747fc89 569 Pfam PF13444 Acetyltransferase (GNAT) domain 324 424 2.4E-22 T 29-03-2018 CVS42_RS06520 aed867d6477bdf0c5018c713e747fc89 569 SMART SM00563 81 198 3.8E-11 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CVS42_RS06520 aed867d6477bdf0c5018c713e747fc89 569 SUPERFAMILY SSF55729 309 519 7.42E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS06520 aed867d6477bdf0c5018c713e747fc89 569 SUPERFAMILY SSF69593 59 247 5.36E-13 T 29-03-2018 CVS42_RS06330 746bf6e15be3d7e7e8dca0dbcfc43067 269 Gene3D G3DSA:3.60.20.10 1 259 1.3E-45 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS06330 746bf6e15be3d7e7e8dca0dbcfc43067 269 Pfam PF13230 Glutamine amidotransferases class-II 1 263 4.5E-112 T 29-03-2018 IPR026869 Putative glutamine amidotransferase type 2 CVS42_RS06330 746bf6e15be3d7e7e8dca0dbcfc43067 269 SUPERFAMILY SSF56235 2 253 5.29E-50 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS00440 99f56beeb53b2d3b37a2851f3d7c2ea2 342 Gene3D G3DSA:3.40.50.10730 153 304 1.4E-26 T 29-03-2018 CVS42_RS00440 99f56beeb53b2d3b37a2851f3d7c2ea2 342 SMART SM00829 12 338 8.3E-5 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CVS42_RS00440 99f56beeb53b2d3b37a2851f3d7c2ea2 342 SUPERFAMILY SSF50129 1 173 2.74E-54 T 29-03-2018 IPR011032 GroES-like CVS42_RS00440 99f56beeb53b2d3b37a2851f3d7c2ea2 342 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.669 T 29-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 CVS42_RS00440 99f56beeb53b2d3b37a2851f3d7c2ea2 342 Pfam PF00107 Zinc-binding dehydrogenase 174 301 5.5E-27 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CVS42_RS00440 99f56beeb53b2d3b37a2851f3d7c2ea2 342 Gene3D G3DSA:3.90.180.10 1 152 4.3E-46 T 29-03-2018 CVS42_RS00440 99f56beeb53b2d3b37a2851f3d7c2ea2 342 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 2.4E-180 T 29-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 CVS42_RS00440 99f56beeb53b2d3b37a2851f3d7c2ea2 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CVS42_RS00440 99f56beeb53b2d3b37a2851f3d7c2ea2 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 3.9E-32 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CVS42_RS00440 99f56beeb53b2d3b37a2851f3d7c2ea2 342 SUPERFAMILY SSF51735 141 305 2.29E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS15445 7cf4b9315e81d6c785e1f2cc6c1d1ffd 268 SUPERFAMILY SSF51215 10 141 3.92E-5 T 29-03-2018 CVS42_RS15445 7cf4b9315e81d6c785e1f2cc6c1d1ffd 268 SMART SM00342 171 254 1.6E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS15445 7cf4b9315e81d6c785e1f2cc6c1d1ffd 268 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 250 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CVS42_RS15445 7cf4b9315e81d6c785e1f2cc6c1d1ffd 268 SUPERFAMILY SSF46689 156 202 8.33E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS15445 7cf4b9315e81d6c785e1f2cc6c1d1ffd 268 Pfam PF12833 Helix-turn-helix domain 177 255 3.6E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS15445 7cf4b9315e81d6c785e1f2cc6c1d1ffd 268 SUPERFAMILY SSF46689 207 255 4.21E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS15445 7cf4b9315e81d6c785e1f2cc6c1d1ffd 268 Gene3D G3DSA:1.10.10.60 210 266 1.7E-14 T 29-03-2018 CVS42_RS15445 7cf4b9315e81d6c785e1f2cc6c1d1ffd 268 Gene3D G3DSA:1.10.10.60 152 209 1.2E-9 T 29-03-2018 CVS42_RS12535 1a70446189d1c6dbd04e1c3c4bea3fe2 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 79 4.5E-21 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CVS42_RS12535 1a70446189d1c6dbd04e1c3c4bea3fe2 98 Gene3D G3DSA:3.30.70.100 1 97 4.3E-26 T 29-03-2018 CVS42_RS12535 1a70446189d1c6dbd04e1c3c4bea3fe2 98 SUPERFAMILY SSF54909 1 95 1.64E-31 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CVS42_RS17155 689bd11adc18cb473a89881216045058 277 SUPERFAMILY SSF46565 131 271 1.46E-29 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS17155 689bd11adc18cb473a89881216045058 277 PRINTS PR00625 DnaJ domain signature 255 275 1.2E-9 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS17155 689bd11adc18cb473a89881216045058 277 PRINTS PR00625 DnaJ domain signature 213 231 1.2E-9 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS17155 689bd11adc18cb473a89881216045058 277 PRINTS PR00625 DnaJ domain signature 231 246 1.2E-9 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS17155 689bd11adc18cb473a89881216045058 277 Gene3D G3DSA:1.10.287.110 183 273 5.5E-17 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS17155 689bd11adc18cb473a89881216045058 277 Gene3D G3DSA:1.10.3680.10 39 182 2.8E-25 T 29-03-2018 IPR029024 TerB-like CVS42_RS17155 689bd11adc18cb473a89881216045058 277 SMART SM00271 210 275 2.4E-17 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS17155 689bd11adc18cb473a89881216045058 277 Pfam PF05099 Tellurite resistance protein TerB 41 171 4.6E-14 T 29-03-2018 IPR007791 Co-chaperone DjlA, N-terminal CVS42_RS17155 689bd11adc18cb473a89881216045058 277 SUPERFAMILY SSF158682 42 174 3.92E-20 T 29-03-2018 CVS42_RS17155 689bd11adc18cb473a89881216045058 277 Pfam PF00226 DnaJ domain 211 270 6.5E-12 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS17155 689bd11adc18cb473a89881216045058 277 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 276 38.739 T 29-03-2018 IPR023749 Co-chaperone DjlA GO:0051087 CVS42_RS05540 2c87cabc01bae6a29f6652d864d34699 289 Gene3D G3DSA:3.40.50.300 15 258 1.9E-48 T 29-03-2018 CVS42_RS05540 2c87cabc01bae6a29f6652d864d34699 289 SUPERFAMILY SSF52540 17 279 1.08E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS05540 2c87cabc01bae6a29f6652d864d34699 289 PIRSF PIRSF003092 1 279 3.3E-81 T 29-03-2018 IPR025501 ATP binding protein MinD CVS42_RS05540 2c87cabc01bae6a29f6652d864d34699 289 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 17 255 1.0E-21 T 29-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CVS42_RS04130 4212e98bec8ae4a3cf09137ada3a452b 693 Gene3D G3DSA:2.40.50.230 373 455 2.0E-36 T 29-03-2018 IPR006531 Gp5 N-terminal CVS42_RS04130 4212e98bec8ae4a3cf09137ada3a452b 693 Gene3D G3DSA:3.55.50.10 98 189 1.3E-28 T 29-03-2018 CVS42_RS04130 4212e98bec8ae4a3cf09137ada3a452b 693 SUPERFAMILY SSF69279 14 185 3.46E-55 T 29-03-2018 CVS42_RS04130 4212e98bec8ae4a3cf09137ada3a452b 693 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 506 8.7E-147 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CVS42_RS04130 4212e98bec8ae4a3cf09137ada3a452b 693 SUPERFAMILY SSF69279 197 359 2.04E-43 T 29-03-2018 CVS42_RS04130 4212e98bec8ae4a3cf09137ada3a452b 693 SUPERFAMILY SSF69255 367 454 1.18E-33 T 29-03-2018 CVS42_RS04130 4212e98bec8ae4a3cf09137ada3a452b 693 SUPERFAMILY SSF69349 445 638 4.16E-45 T 29-03-2018 CVS42_RS04130 4212e98bec8ae4a3cf09137ada3a452b 693 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 9 524 1.3E-205 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CVS42_RS04130 4212e98bec8ae4a3cf09137ada3a452b 693 Pfam PF05954 Phage late control gene D protein (GPD) 30 327 3.0E-87 T 29-03-2018 CVS42_RS07065 1e34440c53f57c444d619d6380f8fd6f 764 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 15 764 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CVS42_RS07065 1e34440c53f57c444d619d6380f8fd6f 764 Pfam PF01228 Glycine radical 634 745 4.2E-40 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CVS42_RS07065 1e34440c53f57c444d619d6380f8fd6f 764 PIRSF PIRSF000379 12 764 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CVS42_RS07065 1e34440c53f57c444d619d6380f8fd6f 764 ProSitePatterns PS00850 Glycine radical domain signature. 734 742 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CVS42_RS07065 1e34440c53f57c444d619d6380f8fd6f 764 Gene3D G3DSA:3.20.70.20 6 764 2.2E-277 T 29-03-2018 CVS42_RS07065 1e34440c53f57c444d619d6380f8fd6f 764 Pfam PF02901 Pyruvate formate lyase-like 27 618 1.3E-193 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CVS42_RS07065 1e34440c53f57c444d619d6380f8fd6f 764 SUPERFAMILY SSF51998 11 764 8.93E-278 T 29-03-2018 CVS42_RS12700 f07f58dfe67bafbb11b1c02bd6fd6340 287 Gene3D G3DSA:3.30.1330.60 54 286 1.4E-25 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS12700 f07f58dfe67bafbb11b1c02bd6fd6340 287 SUPERFAMILY SSF103088 157 279 1.83E-26 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS12700 f07f58dfe67bafbb11b1c02bd6fd6340 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 38 56 2.6E-71 T 29-03-2018 CVS42_RS12700 f07f58dfe67bafbb11b1c02bd6fd6340 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 116 138 2.6E-71 T 29-03-2018 CVS42_RS12700 f07f58dfe67bafbb11b1c02bd6fd6340 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 264 284 2.6E-71 T 29-03-2018 CVS42_RS12700 f07f58dfe67bafbb11b1c02bd6fd6340 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 97 114 2.6E-71 T 29-03-2018 CVS42_RS12700 f07f58dfe67bafbb11b1c02bd6fd6340 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 78 96 2.6E-71 T 29-03-2018 CVS42_RS12700 f07f58dfe67bafbb11b1c02bd6fd6340 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 244 263 2.6E-71 T 29-03-2018 CVS42_RS12700 f07f58dfe67bafbb11b1c02bd6fd6340 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 141 160 2.6E-71 T 29-03-2018 CVS42_RS12700 f07f58dfe67bafbb11b1c02bd6fd6340 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 197 223 2.6E-71 T 29-03-2018 CVS42_RS12700 f07f58dfe67bafbb11b1c02bd6fd6340 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 59 77 2.6E-71 T 29-03-2018 CVS42_RS12700 f07f58dfe67bafbb11b1c02bd6fd6340 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 21 37 2.6E-71 T 29-03-2018 CVS42_RS12700 f07f58dfe67bafbb11b1c02bd6fd6340 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 167 194 2.6E-71 T 29-03-2018 CVS42_RS12700 f07f58dfe67bafbb11b1c02bd6fd6340 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 226 243 2.6E-71 T 29-03-2018 CVS42_RS12700 f07f58dfe67bafbb11b1c02bd6fd6340 287 Pfam PF00691 OmpA family 179 275 2.5E-18 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS05360 83368b5f5ae0679e51035000e97ee4d0 323 Pfam PF01292 Prokaryotic cytochrome b561 111 292 3.5E-21 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CVS42_RS05360 83368b5f5ae0679e51035000e97ee4d0 323 Gene3D G3DSA:1.20.950.20 103 322 3.6E-44 T 29-03-2018 CVS42_RS05360 83368b5f5ae0679e51035000e97ee4d0 323 SUPERFAMILY SSF81342 105 312 4.94E-44 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CVS42_RS05360 83368b5f5ae0679e51035000e97ee4d0 323 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 108 312 2.6E-68 T 29-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 CVS42_RS07795 49757b8eebef19185ea8ffe659cb0da1 279 Gene3D G3DSA:2.10.240.10 242 275 3.6E-10 T 29-03-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CVS42_RS07795 49757b8eebef19185ea8ffe659cb0da1 279 Gene3D G3DSA:2.40.30.10 13 100 2.3E-8 T 29-03-2018 CVS42_RS07795 49757b8eebef19185ea8ffe659cb0da1 279 SUPERFAMILY SSF63380 23 110 1.7E-15 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CVS42_RS07795 49757b8eebef19185ea8ffe659cb0da1 279 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 242 273 1.1E-9 T 29-03-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CVS42_RS07795 49757b8eebef19185ea8ffe659cb0da1 279 PIRSF PIRSF006816 20 279 2.1E-70 T 29-03-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 CVS42_RS07795 49757b8eebef19185ea8ffe659cb0da1 279 SUPERFAMILY SSF52343 117 257 1.96E-28 T 29-03-2018 CVS42_RS07795 49757b8eebef19185ea8ffe659cb0da1 279 Gene3D G3DSA:3.40.50.80 101 239 4.9E-21 T 29-03-2018 CVS42_RS07795 49757b8eebef19185ea8ffe659cb0da1 279 Pfam PF00175 Oxidoreductase NAD-binding domain 123 223 2.6E-16 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CVS42_RS07795 49757b8eebef19185ea8ffe659cb0da1 279 Pfam PF00970 Oxidoreductase FAD-binding domain 45 108 1.3E-4 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CVS42_RS07795 49757b8eebef19185ea8ffe659cb0da1 279 TIGRFAM TIGR02911 sulfite_red_B: sulfite reductase, subunit B 19 279 3.8E-123 T 29-03-2018 IPR014260 Sulphite reductase, subunit B CVS42_RS07795 49757b8eebef19185ea8ffe659cb0da1 279 PRINTS PR00410 Phenol hydroxylase reductase family signature 121 140 2.0E-5 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CVS42_RS07795 49757b8eebef19185ea8ffe659cb0da1 279 PRINTS PR00410 Phenol hydroxylase reductase family signature 49 61 2.0E-5 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CVS42_RS01205 10239ae19f7e331e2eb7f0aed8402d50 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 2.5E-51 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01205 10239ae19f7e331e2eb7f0aed8402d50 127 Gene3D G3DSA:3.90.1030.10 1 117 5.7E-50 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01205 10239ae19f7e331e2eb7f0aed8402d50 127 Pfam PF01196 Ribosomal protein L17 20 116 2.5E-35 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01205 10239ae19f7e331e2eb7f0aed8402d50 127 SUPERFAMILY SSF64263 1 119 3.01E-51 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01205 10239ae19f7e331e2eb7f0aed8402d50 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.772 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01205 10239ae19f7e331e2eb7f0aed8402d50 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS08720 1d666d699111fa09e8a69d4400e5cfdf 421 SUPERFAMILY SSF51905 254 420 2.49E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS08720 1d666d699111fa09e8a69d4400e5cfdf 421 SUPERFAMILY SSF51905 1 35 2.49E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS08720 1d666d699111fa09e8a69d4400e5cfdf 421 SUPERFAMILY SSF51905 185 219 2.49E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS08720 1d666d699111fa09e8a69d4400e5cfdf 421 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 417 4.3E-169 T 29-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CVS42_RS08720 1d666d699111fa09e8a69d4400e5cfdf 421 PIRSF PIRSF000141 1 421 1.6E-133 T 29-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CVS42_RS08720 1d666d699111fa09e8a69d4400e5cfdf 421 Gene3D G3DSA:3.50.50.60 1 421 5.5E-28 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS08720 1d666d699111fa09e8a69d4400e5cfdf 421 Pfam PF00890 FAD binding domain 4 404 4.2E-44 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS16885 5fedfa374e91f291b4f9dbcaf1b1a55f 292 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 284 1.8E-99 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CVS42_RS16885 5fedfa374e91f291b4f9dbcaf1b1a55f 292 SUPERFAMILY SSF53335 46 273 5.88E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS16885 5fedfa374e91f291b4f9dbcaf1b1a55f 292 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 290 1.1E-96 T 29-03-2018 CVS42_RS16885 5fedfa374e91f291b4f9dbcaf1b1a55f 292 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 290 32.114 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CVS42_RS16885 5fedfa374e91f291b4f9dbcaf1b1a55f 292 Gene3D G3DSA:3.40.50.150 99 292 7.4E-34 T 29-03-2018 CVS42_RS16885 5fedfa374e91f291b4f9dbcaf1b1a55f 292 PIRSF PIRSF000401 1 292 5.7E-92 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CVS42_RS10140 a6c5fcffd245e5f2bd3e517c1dd8f7c5 327 SUPERFAMILY SSF55174 32 83 5.0E-9 T 29-03-2018 CVS42_RS10140 a6c5fcffd245e5f2bd3e517c1dd8f7c5 327 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 152 166 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS10140 a6c5fcffd245e5f2bd3e517c1dd8f7c5 327 Gene3D G3DSA:3.10.290.10 17 90 3.9E-15 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS10140 a6c5fcffd245e5f2bd3e517c1dd8f7c5 327 Gene3D G3DSA:3.30.2350.10 104 327 1.8E-71 T 29-03-2018 CVS42_RS10140 a6c5fcffd245e5f2bd3e517c1dd8f7c5 327 SUPERFAMILY SSF55120 106 323 9.6E-66 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS10140 a6c5fcffd245e5f2bd3e517c1dd8f7c5 327 Pfam PF00849 RNA pseudouridylate synthase 114 260 6.1E-33 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS10140 a6c5fcffd245e5f2bd3e517c1dd8f7c5 327 Pfam PF01479 S4 domain 33 79 2.5E-10 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS10140 a6c5fcffd245e5f2bd3e517c1dd8f7c5 327 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 29 323 2.3E-93 T 29-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS10140 a6c5fcffd245e5f2bd3e517c1dd8f7c5 327 SMART SM00363 33 92 1.6E-9 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS15525 9dd30061cc619a4b280826555b6ecd77 300 Gene3D G3DSA:3.30.420.40 116 300 2.2E-49 T 29-03-2018 CVS42_RS15525 9dd30061cc619a4b280826555b6ecd77 300 ProSitePatterns PS01125 ROK family signature. 130 157 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CVS42_RS15525 9dd30061cc619a4b280826555b6ecd77 300 Gene3D G3DSA:3.30.420.40 1 115 1.5E-24 T 29-03-2018 CVS42_RS15525 9dd30061cc619a4b280826555b6ecd77 300 SUPERFAMILY SSF53067 1 298 1.19E-53 T 29-03-2018 CVS42_RS15525 9dd30061cc619a4b280826555b6ecd77 300 Pfam PF00480 ROK family 2 298 1.5E-64 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CVS42_RS02635 f1dafbfa1db4b590449000457c829c7d 152 Pfam PF01475 Ferric uptake regulator family 17 135 7.6E-16 T 29-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CVS42_RS02635 f1dafbfa1db4b590449000457c829c7d 152 Gene3D G3DSA:1.10.10.10 1 88 5.5E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02635 f1dafbfa1db4b590449000457c829c7d 152 SUPERFAMILY SSF46785 9 140 4.07E-33 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS16580 afa248cd3a9de16da1b849d6aecf9f4c 267 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 60 1.7E-15 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CVS42_RS16580 afa248cd3a9de16da1b849d6aecf9f4c 267 Pfam PF01739 CheR methyltransferase, SAM binding domain 75 259 7.8E-53 T 29-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CVS42_RS16580 afa248cd3a9de16da1b849d6aecf9f4c 267 PRINTS PR00996 Glutamate methyltransferase family signature 207 221 4.6E-41 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CVS42_RS16580 afa248cd3a9de16da1b849d6aecf9f4c 267 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 4.6E-41 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CVS42_RS16580 afa248cd3a9de16da1b849d6aecf9f4c 267 PRINTS PR00996 Glutamate methyltransferase family signature 104 124 4.6E-41 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CVS42_RS16580 afa248cd3a9de16da1b849d6aecf9f4c 267 PRINTS PR00996 Glutamate methyltransferase family signature 226 249 4.6E-41 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CVS42_RS16580 afa248cd3a9de16da1b849d6aecf9f4c 267 PRINTS PR00996 Glutamate methyltransferase family signature 136 152 4.6E-41 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CVS42_RS16580 afa248cd3a9de16da1b849d6aecf9f4c 267 PRINTS PR00996 Glutamate methyltransferase family signature 68 80 4.6E-41 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CVS42_RS16580 afa248cd3a9de16da1b849d6aecf9f4c 267 PIRSF PIRSF000410 1 267 7.5E-96 T 29-03-2018 IPR026024 Chemotaxis protein methyltransferase CheR CVS42_RS16580 afa248cd3a9de16da1b849d6aecf9f4c 267 SMART SM00138 8 267 1.8E-85 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CVS42_RS16580 afa248cd3a9de16da1b849d6aecf9f4c 267 Gene3D G3DSA:3.40.50.150 74 267 1.1E-46 T 29-03-2018 CVS42_RS16580 afa248cd3a9de16da1b849d6aecf9f4c 267 SUPERFAMILY SSF53335 75 266 1.72E-54 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS16580 afa248cd3a9de16da1b849d6aecf9f4c 267 SUPERFAMILY SSF47757 5 74 3.92E-16 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CVS42_RS16580 afa248cd3a9de16da1b849d6aecf9f4c 267 Gene3D G3DSA:1.10.155.10 2 73 6.3E-17 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CVS42_RS06915 76b7d3fcf791238ebe070783f46d5d2b 86 SUPERFAMILY SSF55729 2 84 6.36E-18 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS06915 76b7d3fcf791238ebe070783f46d5d2b 86 Pfam PF14542 GCN5-related N-acetyl-transferase 13 84 3.0E-18 T 29-03-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase CVS42_RS06915 76b7d3fcf791238ebe070783f46d5d2b 86 Gene3D G3DSA:3.40.630.30 1 86 7.2E-14 T 29-03-2018 CVS42_RS12655 7a96b83f8d74e657e88d58eb4cfc47ce 214 Pfam PF01844 HNH endonuclease 143 192 1.9E-10 T 29-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CVS42_RS12655 7a96b83f8d74e657e88d58eb4cfc47ce 214 SMART SM00507 130 189 8.7E-10 T 29-03-2018 IPR003615 HNH nuclease CVS42_RS12655 7a96b83f8d74e657e88d58eb4cfc47ce 214 Gene3D G3DSA:3.40.1800.10 121 206 1.1E-13 T 29-03-2018 CVS42_RS13430 d88a741ddde45b32175e99d818ddcf64 300 Gene3D G3DSA:3.20.20.330 1 300 3.4E-75 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CVS42_RS13430 d88a741ddde45b32175e99d818ddcf64 300 SUPERFAMILY SSF82282 3 299 2.35E-80 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CVS42_RS13430 d88a741ddde45b32175e99d818ddcf64 300 Pfam PF02574 Homocysteine S-methyltransferase 8 298 3.6E-56 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CVS42_RS13430 d88a741ddde45b32175e99d818ddcf64 300 PIRSF PIRSF037505 1 300 7.1E-13 T 29-03-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 467 1.4E-180 T 29-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 SMART SM00487 25 221 1.4E-30 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 SUPERFAMILY SSF52540 208 461 2.66E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 Pfam PF00570 HRDC domain 539 605 6.5E-24 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 Pfam PF00271 Helicase conserved C-terminal domain 228 333 2.1E-20 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 Gene3D G3DSA:3.40.50.300 12 211 7.3E-33 T 29-03-2018 CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 Pfam PF09382 RQC domain 409 519 1.2E-40 T 29-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 19 606 5.1E-251 T 29-03-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 SMART SM00490 253 334 1.8E-30 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 Gene3D G3DSA:1.10.10.10 406 532 3.9E-38 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 Gene3D G3DSA:3.40.50.300 213 405 6.6E-53 T 29-03-2018 CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 SUPERFAMILY SSF52540 13 204 5.32E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 SMART SM00341 535 611 1.6E-22 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 Gene3D G3DSA:1.10.150.80 538 611 3.0E-28 T 29-03-2018 CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 SMART SM00956 414 517 2.3E-55 T 29-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 SUPERFAMILY SSF47819 535 610 3.49E-27 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 Pfam PF16124 RecQ zinc-binding 346 407 1.6E-16 T 29-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CVS42_RS00840 d5a0e14ce3b1bb75d465d0fcd700032d 611 Pfam PF00270 DEAD/DEAH box helicase 31 189 7.0E-18 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CVS42_RS20250 4300dc4e09267583c0778ae2f403e633 1234 Gene3D G3DSA:2.60.120.200 283 545 1.4E-33 T 29-03-2018 CVS42_RS20250 4300dc4e09267583c0778ae2f403e633 1234 SUPERFAMILY SSF49899 286 414 2.02E-21 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CVS42_RS20250 4300dc4e09267583c0778ae2f403e633 1234 SUPERFAMILY SSF49899 458 541 2.02E-21 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CVS42_RS07655 c19160c7209f3b869e9f069ffd6e1b69 427 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 270 277 - T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CVS42_RS07655 c19160c7209f3b869e9f069ffd6e1b69 427 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 104 418 4.7E-92 T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CVS42_RS07655 c19160c7209f3b869e9f069ffd6e1b69 427 Gene3D G3DSA:3.40.630.10 88 427 9.6E-100 T 29-03-2018 CVS42_RS07655 c19160c7209f3b869e9f069ffd6e1b69 427 PRINTS PR00481 Cytosol aminopeptidase signature 266 286 3.3E-46 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS07655 c19160c7209f3b869e9f069ffd6e1b69 427 PRINTS PR00481 Cytosol aminopeptidase signature 294 309 3.3E-46 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS07655 c19160c7209f3b869e9f069ffd6e1b69 427 PRINTS PR00481 Cytosol aminopeptidase signature 207 228 3.3E-46 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS07655 c19160c7209f3b869e9f069ffd6e1b69 427 PRINTS PR00481 Cytosol aminopeptidase signature 244 265 3.3E-46 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS07655 c19160c7209f3b869e9f069ffd6e1b69 427 PRINTS PR00481 Cytosol aminopeptidase signature 185 202 3.3E-46 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CVS42_RS07655 c19160c7209f3b869e9f069ffd6e1b69 427 Pfam PF12404 Peptidase 1 76 1.2E-26 T 29-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CVS42_RS07655 c19160c7209f3b869e9f069ffd6e1b69 427 SUPERFAMILY SSF53187 103 423 3.45E-91 T 29-03-2018 CVS42_RS07655 c19160c7209f3b869e9f069ffd6e1b69 427 PIRSF PIRSF036388 1 427 3.6E-183 T 29-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CVS42_RS19390 830b4b5c5373a8b550d7eefcc1801d59 488 Pfam PF00324 Amino acid permease 24 482 1.6E-11 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CVS42_RS19390 830b4b5c5373a8b550d7eefcc1801d59 488 PIRSF PIRSF006060 1 487 4.2E-39 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS20095 955e6d7c8ae880018a0c6e6aaee58aa3 663 Pfam PF01964 Radical SAM ThiC family 153 600 9.9E-200 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CVS42_RS20095 955e6d7c8ae880018a0c6e6aaee58aa3 663 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 152 606 56.585 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CVS42_RS20095 955e6d7c8ae880018a0c6e6aaee58aa3 663 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 152 604 6.5E-222 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CVS42_RS20095 955e6d7c8ae880018a0c6e6aaee58aa3 663 Pfam PF13667 ThiC-associated domain 32 112 6.3E-30 T 29-03-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CVS42_RS01090 ee8434c09df0b2cc6a3991e23c9d66fc 273 Gene3D G3DSA:4.10.950.10 197 272 1.8E-35 T 29-03-2018 IPR014726 Ribosomal protein L2, domain 3 CVS42_RS01090 ee8434c09df0b2cc6a3991e23c9d66fc 273 SUPERFAMILY SSF50249 2 125 1.23E-49 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS01090 ee8434c09df0b2cc6a3991e23c9d66fc 273 SMART SM01383 42 118 4.5E-46 T 29-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01090 ee8434c09df0b2cc6a3991e23c9d66fc 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 1.0E-131 T 29-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CVS42_RS01090 ee8434c09df0b2cc6a3991e23c9d66fc 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.278 T 29-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CVS42_RS01090 ee8434c09df0b2cc6a3991e23c9d66fc 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 2.0E-55 T 29-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CVS42_RS01090 ee8434c09df0b2cc6a3991e23c9d66fc 273 SUPERFAMILY SSF50104 126 269 3.79E-59 T 29-03-2018 IPR008991 Translation protein SH3-like domain CVS42_RS01090 ee8434c09df0b2cc6a3991e23c9d66fc 273 Gene3D G3DSA:2.30.30.30 119 195 1.8E-31 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CVS42_RS01090 ee8434c09df0b2cc6a3991e23c9d66fc 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 9.8E-34 T 29-03-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01090 ee8434c09df0b2cc6a3991e23c9d66fc 273 Gene3D G3DSA:2.40.50.140 1 114 5.4E-48 T 29-03-2018 CVS42_RS01090 ee8434c09df0b2cc6a3991e23c9d66fc 273 PIRSF PIRSF002158 12 273 7.9E-101 T 29-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01090 ee8434c09df0b2cc6a3991e23c9d66fc 273 SMART SM01382 124 251 4.0E-90 T 29-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CVS42_RS05570 5e9bebe63fae84b4bd491e61dcc08407 243 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 205 4.4E-23 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CVS42_RS16115 8928c430697c183ce6bb7d9a3e4f8d45 111 Pfam PF04287 tRNA pseudouridine synthase C 8 102 1.4E-32 T 29-03-2018 IPR023376 YqcC-like domain CVS42_RS16115 8928c430697c183ce6bb7d9a3e4f8d45 111 SUPERFAMILY SSF158452 1 106 7.59E-34 T 29-03-2018 IPR023376 YqcC-like domain CVS42_RS16115 8928c430697c183ce6bb7d9a3e4f8d45 111 Gene3D G3DSA:1.20.1440.40 3 104 1.4E-31 T 29-03-2018 IPR023376 YqcC-like domain CVS42_RS16115 8928c430697c183ce6bb7d9a3e4f8d45 111 PIRSF PIRSF006257 1 108 6.9E-32 T 29-03-2018 IPR007384 Protein of unknown function UCP006257 CVS42_RS08635 0e807769e3a4725f880c848c589dd0a5 364 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 3 357 1.4E-147 T 29-03-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 CVS42_RS08635 0e807769e3a4725f880c848c589dd0a5 364 SMART SM00382 30 213 1.3E-19 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS08635 0e807769e3a4725f880c848c589dd0a5 364 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS08635 0e807769e3a4725f880c848c589dd0a5 364 Gene3D G3DSA:2.40.50.100 243 282 2.8E-4 T 29-03-2018 CVS42_RS08635 0e807769e3a4725f880c848c589dd0a5 364 SUPERFAMILY SSF52540 6 243 2.26E-87 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS08635 0e807769e3a4725f880c848c589dd0a5 364 Pfam PF00005 ABC transporter 21 163 9.7E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS08635 0e807769e3a4725f880c848c589dd0a5 364 SUPERFAMILY SSF50331 239 362 6.07E-12 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CVS42_RS08635 0e807769e3a4725f880c848c589dd0a5 364 Pfam PF08402 TOBE domain 273 359 1.0E-8 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CVS42_RS08635 0e807769e3a4725f880c848c589dd0a5 364 Gene3D G3DSA:2.40.50.140 283 349 6.7E-6 T 29-03-2018 CVS42_RS08635 0e807769e3a4725f880c848c589dd0a5 364 Gene3D G3DSA:3.40.50.300 1 242 5.9E-77 T 29-03-2018 CVS42_RS07070 b2d7ad8e9237d880dac6dab53f140d0d 127 SUPERFAMILY SSF55298 1 127 7.38E-43 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CVS42_RS07070 b2d7ad8e9237d880dac6dab53f140d0d 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 2.8E-50 T 29-03-2018 IPR006056 RidA family CVS42_RS07070 b2d7ad8e9237d880dac6dab53f140d0d 127 Pfam PF01042 Endoribonuclease L-PSP 8 126 1.5E-41 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CVS42_RS07070 b2d7ad8e9237d880dac6dab53f140d0d 127 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 29-03-2018 IPR019897 RidA, conserved site CVS42_RS07070 b2d7ad8e9237d880dac6dab53f140d0d 127 Gene3D G3DSA:3.30.1330.40 1 127 2.0E-45 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CVS42_RS17210 259dc2b8240851952e34d010753898d8 329 Gene3D G3DSA:3.20.20.30 4 327 1.2E-67 T 29-03-2018 CVS42_RS17210 259dc2b8240851952e34d010753898d8 329 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 7 324 2.6E-127 T 29-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 CVS42_RS17210 259dc2b8240851952e34d010753898d8 329 Pfam PF00296 Luciferase-like monooxygenase 20 301 6.1E-31 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CVS42_RS17210 259dc2b8240851952e34d010753898d8 329 SUPERFAMILY SSF51679 5 324 5.3E-78 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CVS42_RS10625 1e8b779242ecb068f99b356be13b3c3c 83 Pfam PF01455 HupF/HypC family 1 67 1.1E-23 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CVS42_RS10625 1e8b779242ecb068f99b356be13b3c3c 83 SUPERFAMILY SSF159127 1 79 1.7E-24 T 29-03-2018 CVS42_RS10625 1e8b779242ecb068f99b356be13b3c3c 83 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 79 2.6E-25 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CVS42_RS10625 1e8b779242ecb068f99b356be13b3c3c 83 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 59 71 1.1E-15 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CVS42_RS10625 1e8b779242ecb068f99b356be13b3c3c 83 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.1E-15 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CVS42_RS10625 1e8b779242ecb068f99b356be13b3c3c 83 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 41 57 1.1E-15 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CVS42_RS10625 1e8b779242ecb068f99b356be13b3c3c 83 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 19 35 1.1E-15 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CVS42_RS12770 f5954f7fe4366021cec8b32f0c763496 126 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 117 8.5E-34 T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CVS42_RS12770 f5954f7fe4366021cec8b32f0c763496 126 Gene3D G3DSA:1.10.3830.10 8 120 4.6E-39 T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CVS42_RS12770 f5954f7fe4366021cec8b32f0c763496 126 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 71 82 - T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CVS42_RS13335 3a71db368ef0081d92cdfb63d62d0b3c 690 Gene3D G3DSA:3.40.50.300 505 676 6.2E-8 T 29-03-2018 CVS42_RS13335 3a71db368ef0081d92cdfb63d62d0b3c 690 SUPERFAMILY SSF52540 17 123 2.79E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS13335 3a71db368ef0081d92cdfb63d62d0b3c 690 SUPERFAMILY SSF52540 630 665 2.79E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS13335 3a71db368ef0081d92cdfb63d62d0b3c 690 SUPERFAMILY SSF52540 213 273 2.79E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS13335 3a71db368ef0081d92cdfb63d62d0b3c 690 SMART SM00491 539 671 2.4E-29 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CVS42_RS13335 3a71db368ef0081d92cdfb63d62d0b3c 690 Gene3D G3DSA:3.40.50.300 23 481 4.3E-18 T 29-03-2018 CVS42_RS13335 3a71db368ef0081d92cdfb63d62d0b3c 690 Pfam PF13307 Helicase C-terminal domain 530 684 2.7E-32 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CVS42_RS13335 3a71db368ef0081d92cdfb63d62d0b3c 690 Pfam PF06733 DEAD_2 192 266 1.4E-5 T 29-03-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 CVS42_RS13630 a8f708e2b833846664f118c80b057e83 137 Pfam PF05130 FlgN protein 2 127 7.8E-19 T 29-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CVS42_RS13630 a8f708e2b833846664f118c80b057e83 137 SUPERFAMILY SSF140566 2 109 3.01E-16 T 29-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CVS42_RS13630 a8f708e2b833846664f118c80b057e83 137 Gene3D G3DSA:1.20.58.300 2 110 8.1E-11 T 29-03-2018 CVS42_RS03720 58583fd49ec0266e804c5cd7b73578c0 105 SUPERFAMILY SSF54913 2 104 3.63E-37 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CVS42_RS03720 58583fd49ec0266e804c5cd7b73578c0 105 Gene3D G3DSA:3.30.70.120 1 105 4.1E-39 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CVS42_RS03720 58583fd49ec0266e804c5cd7b73578c0 105 Pfam PF03091 CutA1 divalent ion tolerance protein 5 101 5.6E-36 T 29-03-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 CVS42_RS10520 ef52f97572dc678771d8ab174c9d205a 277 Gene3D G3DSA:3.10.20.10 41 127 1.2E-20 T 29-03-2018 CVS42_RS10520 ef52f97572dc678771d8ab174c9d205a 277 Gene3D G3DSA:3.40.140.10 142 277 9.5E-43 T 29-03-2018 CVS42_RS10520 ef52f97572dc678771d8ab174c9d205a 277 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 11 275 32.486 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CVS42_RS10520 ef52f97572dc678771d8ab174c9d205a 277 Pfam PF02634 FdhD/NarQ family 40 274 6.5E-72 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CVS42_RS10520 ef52f97572dc678771d8ab174c9d205a 277 SUPERFAMILY SSF53927 23 274 1.2E-74 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CVS42_RS10520 ef52f97572dc678771d8ab174c9d205a 277 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 38 274 1.1E-71 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CVS42_RS10520 ef52f97572dc678771d8ab174c9d205a 277 PIRSF PIRSF015626 7 277 1.5E-77 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CVS42_RS15925 0323de6c87229cef38955e44441edcb7 316 SUPERFAMILY SSF52440 3 123 4.32E-45 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CVS42_RS15925 0323de6c87229cef38955e44441edcb7 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 176.437 T 29-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CVS42_RS15925 0323de6c87229cef38955e44441edcb7 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 1.3E-78 T 29-03-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CVS42_RS15925 0323de6c87229cef38955e44441edcb7 316 SUPERFAMILY SSF56059 124 313 1.55E-58 T 29-03-2018 CVS42_RS15925 0323de6c87229cef38955e44441edcb7 316 Gene3D G3DSA:3.30.1490.20 139 192 8.2E-22 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CVS42_RS15925 0323de6c87229cef38955e44441edcb7 316 Gene3D G3DSA:3.30.470.20 193 301 1.1E-16 T 29-03-2018 CVS42_RS15925 0323de6c87229cef38955e44441edcb7 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 121 7.1E-46 T 29-03-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CVS42_RS15925 0323de6c87229cef38955e44441edcb7 316 Gene3D G3DSA:3.40.50.20 3 130 8.0E-51 T 29-03-2018 CVS42_RS15925 0323de6c87229cef38955e44441edcb7 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 312 1.9E-136 T 29-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CVS42_RS16565 741b6e7ed4b372c1472a431a5c8cd71e 641 Gene3D G3DSA:1.10.287.1060 337 409 0.016 T 29-03-2018 CVS42_RS16565 741b6e7ed4b372c1472a431a5c8cd71e 641 SUPERFAMILY SSF58104 324 591 1.83E-63 T 29-03-2018 CVS42_RS16565 741b6e7ed4b372c1472a431a5c8cd71e 641 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 417 577 1.5E-34 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS16565 741b6e7ed4b372c1472a431a5c8cd71e 641 Gene3D G3DSA:1.20.120.30 23 186 1.3E-21 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CVS42_RS16565 741b6e7ed4b372c1472a431a5c8cd71e 641 Gene3D G3DSA:1.10.287.950 410 576 1.6E-46 T 29-03-2018 CVS42_RS16565 741b6e7ed4b372c1472a431a5c8cd71e 641 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 183 8.8E-22 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CVS42_RS16565 741b6e7ed4b372c1472a431a5c8cd71e 641 Gene3D G3DSA:1.10.287.500 214 332 0.0096 T 29-03-2018 CVS42_RS16565 741b6e7ed4b372c1472a431a5c8cd71e 641 SMART SM00283 357 590 7.3E-67 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS16565 741b6e7ed4b372c1472a431a5c8cd71e 641 SUPERFAMILY SSF158472 213 261 4.84E-9 T 29-03-2018 CVS42_RS16565 741b6e7ed4b372c1472a431a5c8cd71e 641 SMART SM00304 304 356 0.79 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS16565 741b6e7ed4b372c1472a431a5c8cd71e 641 SMART SM00304 212 264 8.7E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS16565 741b6e7ed4b372c1472a431a5c8cd71e 641 Pfam PF00672 HAMP domain 212 259 2.9E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS01380 a5972f93f675868ab19652e244aff988 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 4 421 1.1E-196 T 29-03-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 CVS42_RS01380 a5972f93f675868ab19652e244aff988 422 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CVS42_RS01380 a5972f93f675868ab19652e244aff988 422 Gene3D G3DSA:3.40.640.10 1 287 4.5E-61 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS01380 a5972f93f675868ab19652e244aff988 422 PIRSF PIRSF001434 1 422 1.8E-130 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CVS42_RS01380 a5972f93f675868ab19652e244aff988 422 Gene3D G3DSA:3.90.1150.10 289 422 9.5E-52 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS01380 a5972f93f675868ab19652e244aff988 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 421 1.6E-138 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CVS42_RS01380 a5972f93f675868ab19652e244aff988 422 SUPERFAMILY SSF53383 1 421 1.58E-127 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS05285 4f7b61c60486ee412c8f1d9a428344f8 231 SUPERFAMILY SSF52540 3 217 5.72E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS05285 4f7b61c60486ee412c8f1d9a428344f8 231 Gene3D G3DSA:3.40.50.300 1 229 3.5E-46 T 29-03-2018 CVS42_RS05285 4f7b61c60486ee412c8f1d9a428344f8 231 Pfam PF00005 ABC transporter 23 162 7.8E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS05285 4f7b61c60486ee412c8f1d9a428344f8 231 SMART SM00382 27 217 7.9E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS05285 4f7b61c60486ee412c8f1d9a428344f8 231 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS05825 a84abfb584a747e4c26ebd127b51bade 705 Pfam PF00771 FHIPEP family 27 695 2.1E-236 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS05825 a84abfb584a747e4c26ebd127b51bade 705 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 138 161 - T 29-03-2018 IPR025505 FHIPEP conserved site CVS42_RS05825 a84abfb584a747e4c26ebd127b51bade 705 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 15 703 2.2E-302 T 29-03-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 CVS42_RS05825 a84abfb584a747e4c26ebd127b51bade 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 1.2E-57 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS05825 a84abfb584a747e4c26ebd127b51bade 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 1.2E-57 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS05825 a84abfb584a747e4c26ebd127b51bade 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 152 170 1.2E-57 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS05825 a84abfb584a747e4c26ebd127b51bade 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 133 149 1.2E-57 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS05825 a84abfb584a747e4c26ebd127b51bade 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 182 199 1.2E-57 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS05825 a84abfb584a747e4c26ebd127b51bade 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 233 247 1.2E-57 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS05825 a84abfb584a747e4c26ebd127b51bade 705 PIRSF PIRSF005419 1 705 1.1E-263 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS08900 2527dc46d87cb56f0e5b4d9ffc220653 83 Gene3D G3DSA:3.30.910.10 1 76 6.0E-26 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CVS42_RS08900 2527dc46d87cb56f0e5b4d9ffc220653 83 SUPERFAMILY SSF54857 1 77 2.22E-22 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CVS42_RS08900 2527dc46d87cb56f0e5b4d9ffc220653 83 Pfam PF06183 DinI-like family 14 76 6.2E-23 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CVS42_RS15125 4dd76858a9c841e443dbd1c957ed1dec 174 SUPERFAMILY SSF160631 20 167 3.53E-9 T 29-03-2018 CVS42_RS15125 4dd76858a9c841e443dbd1c957ed1dec 174 Gene3D G3DSA:3.40.1580.10 5 173 1.4E-10 T 29-03-2018 CVS42_RS15125 4dd76858a9c841e443dbd1c957ed1dec 174 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 28 166 1.4E-9 T 29-03-2018 IPR018958 Knr4/Smi1-like domain CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 PRINTS PR00301 70kDa heat shock protein signature 7 20 1.1E-37 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 PRINTS PR00301 70kDa heat shock protein signature 118 138 1.1E-37 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 PRINTS PR00301 70kDa heat shock protein signature 298 314 1.1E-37 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 PRINTS PR00301 70kDa heat shock protein signature 354 373 1.1E-37 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 PRINTS PR00301 70kDa heat shock protein signature 437 453 1.1E-37 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 PRINTS PR00301 70kDa heat shock protein signature 35 47 1.1E-37 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 PRINTS PR00301 70kDa heat shock protein signature 177 187 1.1E-37 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 PRINTS PR00301 70kDa heat shock protein signature 329 349 1.1E-37 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 Gene3D G3DSA:3.30.420.40 177 326 4.7E-30 T 29-03-2018 CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 SUPERFAMILY SSF53067 7 162 1.62E-48 T 29-03-2018 CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 SUPERFAMILY SSF100920 352 492 2.22E-26 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 Gene3D G3DSA:3.30.420.40 5 176 2.1E-56 T 29-03-2018 CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 171 184 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 SUPERFAMILY SSF53067 167 345 6.79E-37 T 29-03-2018 CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 Pfam PF00012 Hsp70 protein 8 80 2.6E-18 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 Pfam PF00012 Hsp70 protein 86 499 9.1E-92 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 Gene3D G3DSA:2.60.34.10 335 539 1.3E-33 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CVS42_RS04870 9760f989a23c0301f1d9254b6ea9fcbb 557 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 11 18 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CVS42_RS17895 8676ed59844bee5c17521a4ad49bdf92 937 Gene3D G3DSA:3.30.830.10 729 928 3.1E-31 T 29-03-2018 CVS42_RS17895 8676ed59844bee5c17521a4ad49bdf92 937 Gene3D G3DSA:3.30.830.10 36 253 4.0E-57 T 29-03-2018 CVS42_RS17895 8676ed59844bee5c17521a4ad49bdf92 937 SUPERFAMILY SSF63411 263 454 6.33E-35 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CVS42_RS17895 8676ed59844bee5c17521a4ad49bdf92 937 SUPERFAMILY SSF63411 505 708 2.27E-44 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CVS42_RS17895 8676ed59844bee5c17521a4ad49bdf92 937 Gene3D G3DSA:3.30.830.10 507 714 6.7E-41 T 29-03-2018 CVS42_RS17895 8676ed59844bee5c17521a4ad49bdf92 937 SUPERFAMILY SSF63411 36 245 3.12E-55 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CVS42_RS17895 8676ed59844bee5c17521a4ad49bdf92 937 Pfam PF00675 Insulinase (Peptidase family M16) 49 184 1.3E-17 T 29-03-2018 IPR011765 Peptidase M16, N-terminal CVS42_RS17895 8676ed59844bee5c17521a4ad49bdf92 937 Pfam PF00675 Insulinase (Peptidase family M16) 526 641 2.1E-11 T 29-03-2018 IPR011765 Peptidase M16, N-terminal CVS42_RS17895 8676ed59844bee5c17521a4ad49bdf92 937 Gene3D G3DSA:3.30.830.10 254 463 1.4E-29 T 29-03-2018 CVS42_RS17895 8676ed59844bee5c17521a4ad49bdf92 937 Pfam PF05193 Peptidase M16 inactive domain 672 847 4.0E-26 T 29-03-2018 IPR007863 Peptidase M16, C-terminal CVS42_RS17895 8676ed59844bee5c17521a4ad49bdf92 937 Pfam PF05193 Peptidase M16 inactive domain 206 383 3.6E-26 T 29-03-2018 IPR007863 Peptidase M16, C-terminal CVS42_RS17895 8676ed59844bee5c17521a4ad49bdf92 937 SUPERFAMILY SSF63411 734 927 1.83E-38 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CVS42_RS00620 8b9046021e742924145ac56afdd4b27f 105 Gene3D G3DSA:2.102.10.10 1 105 1.7E-19 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CVS42_RS00620 8b9046021e742924145ac56afdd4b27f 105 Pfam PF13806 Rieske-like [2Fe-2S] domain 4 104 1.8E-37 T 29-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CVS42_RS00620 8b9046021e742924145ac56afdd4b27f 105 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 104 8.6E-34 T 29-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CVS42_RS00620 8b9046021e742924145ac56afdd4b27f 105 SUPERFAMILY SSF50022 3 105 1.02E-35 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CVS42_RS14310 b303e1f0ef5755852cfe2dfdcb09ce0c 318 SUPERFAMILY SSF53613 9 311 9.35E-78 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS14310 b303e1f0ef5755852cfe2dfdcb09ce0c 318 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CVS42_RS14310 b303e1f0ef5755852cfe2dfdcb09ce0c 318 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 35 59 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CVS42_RS14310 b303e1f0ef5755852cfe2dfdcb09ce0c 318 Gene3D G3DSA:3.40.1190.20 11 316 1.2E-69 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS14310 b303e1f0ef5755852cfe2dfdcb09ce0c 318 Pfam PF00294 pfkB family carbohydrate kinase 10 303 8.3E-62 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CVS42_RS07600 dfea85cff1220114e2a95904696a8b27 177 Pfam PF02036 SCP-2 sterol transfer family 36 134 2.7E-20 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CVS42_RS07600 dfea85cff1220114e2a95904696a8b27 177 Gene3D G3DSA:3.30.1050.10 26 140 8.6E-20 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CVS42_RS07600 dfea85cff1220114e2a95904696a8b27 177 PIRSF PIRSF025550 1 173 4.7E-73 T 29-03-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT CVS42_RS07600 dfea85cff1220114e2a95904696a8b27 177 SUPERFAMILY SSF55718 31 139 1.77E-22 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CVS42_RS20615 f2f2743d50b2a8e63b6b5a8ec37d2e9c 130 Gene3D G3DSA:3.40.1260.10 3 130 1.0E-27 T 29-03-2018 CVS42_RS20615 f2f2743d50b2a8e63b6b5a8ec37d2e9c 130 Pfam PF02635 DsrE/DsrF-like family 5 130 4.7E-28 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CVS42_RS20615 f2f2743d50b2a8e63b6b5a8ec37d2e9c 130 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 130 4.0E-50 T 29-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 CVS42_RS20615 f2f2743d50b2a8e63b6b5a8ec37d2e9c 130 SUPERFAMILY SSF75169 1 130 4.54E-36 T 29-03-2018 IPR027396 DsrEFH-like CVS42_RS00375 f2b3d5c128fd04a3a875a006af15bcba 616 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 145 1.2E-27 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS00375 f2b3d5c128fd04a3a875a006af15bcba 616 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 1 616 33.994 T 29-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 CVS42_RS00375 f2b3d5c128fd04a3a875a006af15bcba 616 SUPERFAMILY SSF56935 27 615 2.93E-117 T 29-03-2018 CVS42_RS00375 f2b3d5c128fd04a3a875a006af15bcba 616 Gene3D G3DSA:2.40.170.20 156 615 7.1E-71 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS00375 f2b3d5c128fd04a3a875a006af15bcba 616 Gene3D G3DSA:2.170.130.10 17 155 7.0E-34 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS00375 f2b3d5c128fd04a3a875a006af15bcba 616 Pfam PF00593 TonB dependent receptor 226 615 4.7E-54 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS15065 09be79b46919917e1e02d479659f40ae 190 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 4.3E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS15065 09be79b46919917e1e02d479659f40ae 190 Gene3D G3DSA:3.55.40.10 41 190 9.8E-41 T 29-03-2018 CVS42_RS15065 09be79b46919917e1e02d479659f40ae 190 SUPERFAMILY SSF54523 13 109 9.42E-12 T 29-03-2018 CVS42_RS15065 09be79b46919917e1e02d479659f40ae 190 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 8 179 1.1E-58 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CVS42_RS15065 09be79b46919917e1e02d479659f40ae 190 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS15065 09be79b46919917e1e02d479659f40ae 190 Pfam PF12019 Type II transport protein GspH 48 168 1.4E-11 T 29-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 CVS42_RS15065 09be79b46919917e1e02d479659f40ae 190 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 32 3.8E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS15065 09be79b46919917e1e02d479659f40ae 190 PRINTS PR00885 Bacterial general secretion pathway protein H signature 23 37 1.1E-16 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CVS42_RS15065 09be79b46919917e1e02d479659f40ae 190 PRINTS PR00885 Bacterial general secretion pathway protein H signature 8 22 1.1E-16 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CVS42_RS15065 09be79b46919917e1e02d479659f40ae 190 PRINTS PR00885 Bacterial general secretion pathway protein H signature 139 154 1.1E-16 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CVS42_RS21490 253844a7b2cf3d947652e6608535afd8 431 SMART SM00387 322 430 1.7E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS21490 253844a7b2cf3d947652e6608535afd8 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 218 277 3.1E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS21490 253844a7b2cf3d947652e6608535afd8 431 SMART SM00388 217 279 8.7E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS21490 253844a7b2cf3d947652e6608535afd8 431 Pfam PF00672 HAMP domain 163 212 2.7E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS21490 253844a7b2cf3d947652e6608535afd8 431 SUPERFAMILY SSF47384 200 277 2.16E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS21490 253844a7b2cf3d947652e6608535afd8 431 Gene3D G3DSA:3.30.565.10 284 431 4.2E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS21490 253844a7b2cf3d947652e6608535afd8 431 SMART SM00304 163 216 3.2E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS21490 253844a7b2cf3d947652e6608535afd8 431 SUPERFAMILY SSF55874 269 430 1.07E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS21490 253844a7b2cf3d947652e6608535afd8 431 Gene3D G3DSA:1.10.287.130 207 275 5.9E-14 T 29-03-2018 CVS42_RS21490 253844a7b2cf3d947652e6608535afd8 431 SUPERFAMILY SSF158472 163 215 1.57E-12 T 29-03-2018 CVS42_RS21490 253844a7b2cf3d947652e6608535afd8 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 429 1.8E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS21490 253844a7b2cf3d947652e6608535afd8 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 1.3E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS21490 253844a7b2cf3d947652e6608535afd8 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 1.3E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS21490 253844a7b2cf3d947652e6608535afd8 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 1.3E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS21490 253844a7b2cf3d947652e6608535afd8 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 1.3E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS14550 01b60337dd85a95b6914ffc1d6fb1051 361 Gene3D G3DSA:3.40.50.720 1 201 1.1E-37 T 29-03-2018 CVS42_RS14550 01b60337dd85a95b6914ffc1d6fb1051 361 Gene3D G3DSA:3.90.25.10 202 360 1.6E-50 T 29-03-2018 CVS42_RS14550 01b60337dd85a95b6914ffc1d6fb1051 361 SUPERFAMILY SSF51735 1 356 1.14E-93 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS14550 01b60337dd85a95b6914ffc1d6fb1051 361 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 344 6.5E-154 T 29-03-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CVS42_RS14550 01b60337dd85a95b6914ffc1d6fb1051 361 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 330 1.0E-94 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS04245 134e2159245c893df79bcfb2a6de15dc 815 Pfam PF02687 FtsX-like permease family 278 368 3.3E-9 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CVS42_RS21835 b95aa5e9b43e254a00282960b6ea1d16 367 Gene3D G3DSA:3.40.50.2300 151 281 3.5E-33 T 29-03-2018 CVS42_RS21835 b95aa5e9b43e254a00282960b6ea1d16 367 Gene3D G3DSA:3.40.50.2300 282 361 3.5E-9 T 29-03-2018 CVS42_RS21835 b95aa5e9b43e254a00282960b6ea1d16 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 327 342 4.0E-48 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CVS42_RS21835 b95aa5e9b43e254a00282960b6ea1d16 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 252 270 4.0E-48 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CVS42_RS21835 b95aa5e9b43e254a00282960b6ea1d16 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 24 40 4.0E-48 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CVS42_RS21835 b95aa5e9b43e254a00282960b6ea1d16 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 46 62 4.0E-48 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CVS42_RS21835 b95aa5e9b43e254a00282960b6ea1d16 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 86 96 4.0E-48 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CVS42_RS21835 b95aa5e9b43e254a00282960b6ea1d16 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 275 288 4.0E-48 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CVS42_RS21835 b95aa5e9b43e254a00282960b6ea1d16 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 65 83 4.0E-48 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CVS42_RS21835 b95aa5e9b43e254a00282960b6ea1d16 367 Pfam PF13458 Periplasmic binding protein 23 361 1.1E-66 T 29-03-2018 IPR028081 Leucine-binding protein domain CVS42_RS21835 b95aa5e9b43e254a00282960b6ea1d16 367 SUPERFAMILY SSF53822 22 362 9.71E-95 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CVS42_RS21835 b95aa5e9b43e254a00282960b6ea1d16 367 Gene3D G3DSA:3.40.50.2300 13 150 4.8E-34 T 29-03-2018 CVS42_RS14780 9175061d87570ddd266d37fb02315144 122 Pfam PF12840 Helix-turn-helix domain 8 69 3.9E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS14780 9175061d87570ddd266d37fb02315144 122 Gene3D G3DSA:1.10.10.10 1 90 1.1E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS14780 9175061d87570ddd266d37fb02315144 122 SMART SM00418 8 88 1.7E-8 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CVS42_RS14780 9175061d87570ddd266d37fb02315144 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 1.5E-5 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CVS42_RS14780 9175061d87570ddd266d37fb02315144 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.5E-5 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CVS42_RS14780 9175061d87570ddd266d37fb02315144 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 1.5E-5 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CVS42_RS14780 9175061d87570ddd266d37fb02315144 122 SUPERFAMILY SSF46785 3 93 3.85E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS19250 484dfc82d3d031098c5e3d791d0d22bd 210 PIRSF PIRSF004649 1 209 3.4E-60 T 29-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CVS42_RS19250 484dfc82d3d031098c5e3d791d0d22bd 210 Gene3D G3DSA:3.10.450.50 29 82 3.1E-7 T 29-03-2018 CVS42_RS19250 484dfc82d3d031098c5e3d791d0d22bd 210 Gene3D G3DSA:3.10.450.50 83 173 2.8E-18 T 29-03-2018 CVS42_RS19250 484dfc82d3d031098c5e3d791d0d22bd 210 Pfam PF05494 MlaC protein 36 200 3.0E-47 T 29-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CVS42_RS09135 951220c10c6f433f7f8552c0831b5b27 270 SUPERFAMILY SSF52540 1 268 1.49E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09135 951220c10c6f433f7f8552c0831b5b27 270 Gene3D G3DSA:3.40.50.300 1 260 3.8E-57 T 29-03-2018 CVS42_RS09135 951220c10c6f433f7f8552c0831b5b27 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.7E-112 T 29-03-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 CVS42_RS09135 951220c10c6f433f7f8552c0831b5b27 270 PIRSF PIRSF003092 1 270 1.2E-97 T 29-03-2018 IPR025501 ATP binding protein MinD CVS42_RS09135 951220c10c6f433f7f8552c0831b5b27 270 Pfam PF13614 AAA domain 3 157 9.4E-22 T 29-03-2018 IPR025669 AAA domain CVS42_RS16170 773d6513745a9e94425f910301ac6842 266 SMART SM00475 4 262 1.0E-67 T 29-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CVS42_RS16170 773d6513745a9e94425f910301ac6842 266 Gene3D G3DSA:3.40.50.1010 6 184 3.2E-44 T 29-03-2018 IPR029060 PIN domain-like CVS42_RS16170 773d6513745a9e94425f910301ac6842 266 Gene3D G3DSA:1.10.150.20 185 263 7.0E-22 T 29-03-2018 CVS42_RS16170 773d6513745a9e94425f910301ac6842 266 SMART SM00279 173 208 3.8E-12 T 29-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CVS42_RS16170 773d6513745a9e94425f910301ac6842 266 SUPERFAMILY SSF47807 170 262 3.29E-22 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CVS42_RS16170 773d6513745a9e94425f910301ac6842 266 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 7 170 4.2E-32 T 29-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CVS42_RS16170 773d6513745a9e94425f910301ac6842 266 SUPERFAMILY SSF88723 6 161 1.13E-37 T 29-03-2018 IPR029060 PIN domain-like CVS42_RS16170 773d6513745a9e94425f910301ac6842 266 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 262 4.6E-25 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CVS42_RS16170 773d6513745a9e94425f910301ac6842 266 Hamap MF_01192 Flap endonuclease Xni [xni]. 5 263 45.146 T 29-03-2018 IPR022895 Flap endonuclease Xni GO:0048256 CVS42_RS19325 e27e82a3d55bf6d86e432bf8ff6477ac 58 Pfam PF13627 Prokaryotic lipoprotein-attachment site 9 30 3.3E-8 T 29-03-2018 IPR032831 Prokaryotic lipoprotein-attachment site CVS42_RS21555 f1ebe7b791b4657e134d27e87448fe7f 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 4.0E-135 T 29-03-2018 IPR014188 Acrylyl-CoA reductase AcuI CVS42_RS21555 f1ebe7b791b4657e134d27e87448fe7f 326 Gene3D G3DSA:3.90.180.10 1 139 1.0E-27 T 29-03-2018 CVS42_RS21555 f1ebe7b791b4657e134d27e87448fe7f 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 2.3E-5 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CVS42_RS21555 f1ebe7b791b4657e134d27e87448fe7f 326 SUPERFAMILY SSF50129 2 145 2.89E-45 T 29-03-2018 IPR011032 GroES-like CVS42_RS21555 f1ebe7b791b4657e134d27e87448fe7f 326 SMART SM00829 13 324 6.9E-6 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CVS42_RS21555 f1ebe7b791b4657e134d27e87448fe7f 326 Pfam PF00107 Zinc-binding dehydrogenase 159 271 1.4E-10 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CVS42_RS21555 f1ebe7b791b4657e134d27e87448fe7f 326 SUPERFAMILY SSF51735 116 291 3.81E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS21555 f1ebe7b791b4657e134d27e87448fe7f 326 Gene3D G3DSA:3.40.50.720 140 317 4.5E-18 T 29-03-2018 CVS42_RS05335 f212ec9a91bac6aa1baf5c00e7c71394 579 Pfam PF12838 4Fe-4S dicluster domain 220 261 1.3E-6 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS05335 f212ec9a91bac6aa1baf5c00e7c71394 579 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 478 489 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS05335 f212ec9a91bac6aa1baf5c00e7c71394 579 Gene3D G3DSA:3.30.70.20 251 452 2.8E-11 T 29-03-2018 CVS42_RS05335 f212ec9a91bac6aa1baf5c00e7c71394 579 Gene3D G3DSA:3.30.70.20 453 484 4.3E-11 T 29-03-2018 CVS42_RS05335 f212ec9a91bac6aa1baf5c00e7c71394 579 Gene3D G3DSA:1.10.1060.10 485 562 1.5E-4 T 29-03-2018 CVS42_RS05335 f212ec9a91bac6aa1baf5c00e7c71394 579 Pfam PF00037 4Fe-4S binding domain 473 493 6.1E-6 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS05335 f212ec9a91bac6aa1baf5c00e7c71394 579 SUPERFAMILY SSF54862 438 536 6.68E-37 T 29-03-2018 CVS42_RS05335 f212ec9a91bac6aa1baf5c00e7c71394 579 SUPERFAMILY SSF54862 194 268 6.68E-37 T 29-03-2018 CVS42_RS05335 f212ec9a91bac6aa1baf5c00e7c71394 579 Gene3D G3DSA:3.30.70.20 204 250 1.2E-12 T 29-03-2018 CVS42_RS21575 446eaf0fe3f6981fbd5536f6e422d288 345 SUPERFAMILY SSF53756 2 338 2.2E-61 T 29-03-2018 CVS42_RS21575 446eaf0fe3f6981fbd5536f6e422d288 345 Gene3D G3DSA:3.40.50.2000 1 147 7.6E-27 T 29-03-2018 CVS42_RS21575 446eaf0fe3f6981fbd5536f6e422d288 345 Gene3D G3DSA:3.40.50.2000 160 338 7.7E-25 T 29-03-2018 CVS42_RS21575 446eaf0fe3f6981fbd5536f6e422d288 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 307 2.1E-13 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CVS42_RS18730 c4e15767660572327e28488d62aed207 413 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 173 201 - T 29-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 CVS42_RS18730 c4e15767660572327e28488d62aed207 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 74 86 3.0E-18 T 29-03-2018 IPR003004 GspF/PilC family CVS42_RS18730 c4e15767660572327e28488d62aed207 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 393 412 3.0E-18 T 29-03-2018 IPR003004 GspF/PilC family CVS42_RS18730 c4e15767660572327e28488d62aed207 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 377 391 3.0E-18 T 29-03-2018 IPR003004 GspF/PilC family CVS42_RS18730 c4e15767660572327e28488d62aed207 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 173 201 3.0E-18 T 29-03-2018 IPR003004 GspF/PilC family CVS42_RS18730 c4e15767660572327e28488d62aed207 413 Pfam PF00482 Type II secretion system (T2SS), protein F 282 404 1.8E-27 T 29-03-2018 IPR018076 Type II secretion system F domain CVS42_RS18730 c4e15767660572327e28488d62aed207 413 Pfam PF00482 Type II secretion system (T2SS), protein F 79 201 5.9E-32 T 29-03-2018 IPR018076 Type II secretion system F domain CVS42_RS05940 7f3df746b57134a8e1ff79056bb67c15 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 3.1E-61 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CVS42_RS05940 7f3df746b57134a8e1ff79056bb67c15 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.048 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CVS42_RS05940 7f3df746b57134a8e1ff79056bb67c15 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 29-03-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CVS42_RS05940 7f3df746b57134a8e1ff79056bb67c15 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 156 6.9E-68 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CVS42_RS05940 7f3df746b57134a8e1ff79056bb67c15 173 Gene3D G3DSA:3.30.420.10 2 159 4.6E-49 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS05940 7f3df746b57134a8e1ff79056bb67c15 173 SUPERFAMILY SSF53098 3 156 5.69E-53 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS05940 7f3df746b57134a8e1ff79056bb67c15 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 5.1E-39 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CVS42_RS05940 7f3df746b57134a8e1ff79056bb67c15 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 5.1E-39 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CVS42_RS05940 7f3df746b57134a8e1ff79056bb67c15 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 5.1E-39 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CVS42_RS05940 7f3df746b57134a8e1ff79056bb67c15 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 5.1E-39 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CVS42_RS05940 7f3df746b57134a8e1ff79056bb67c15 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 5.1E-39 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CVS42_RS07035 f67b36f921589b999d0b8328bf4daebe 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS07035 f67b36f921589b999d0b8328bf4daebe 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS07035 f67b36f921589b999d0b8328bf4daebe 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS07035 f67b36f921589b999d0b8328bf4daebe 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 4.3E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS07035 f67b36f921589b999d0b8328bf4daebe 302 SUPERFAMILY SSF53850 93 298 5.58E-37 T 29-03-2018 CVS42_RS07035 f67b36f921589b999d0b8328bf4daebe 302 Gene3D G3DSA:1.10.10.10 2 85 1.2E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS07035 f67b36f921589b999d0b8328bf4daebe 302 SUPERFAMILY SSF46785 4 115 1.59E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS07035 f67b36f921589b999d0b8328bf4daebe 302 Gene3D G3DSA:3.40.190.10 181 272 3.3E-15 T 29-03-2018 CVS42_RS07035 f67b36f921589b999d0b8328bf4daebe 302 Pfam PF03466 LysR substrate binding domain 93 295 1.6E-39 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS07035 f67b36f921589b999d0b8328bf4daebe 302 Gene3D G3DSA:3.40.190.10 91 180 1.3E-18 T 29-03-2018 CVS42_RS18400 90e27f5724c48742e0891cbc7e39f146 420 Pfam PF02447 GntP family permease 10 414 7.9E-23 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CVS42_RS17135 57bebf835cda0342d4580e00f51ed5be 422 SUPERFAMILY SSF53474 51 420 2.29E-50 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS17135 57bebf835cda0342d4580e00f51ed5be 422 Gene3D G3DSA:3.40.50.1820 171 420 1.7E-21 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS17135 57bebf835cda0342d4580e00f51ed5be 422 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 7 421 4.7E-133 T 29-03-2018 IPR010520 UPF0255 family CVS42_RS17135 57bebf835cda0342d4580e00f51ed5be 422 Gene3D G3DSA:1.20.1440.110 47 170 1.7E-24 T 29-03-2018 CVS42_RS07030 6a8108aba5366b82de1f5de275f9296c 149 Pfam PF00877 NlpC/P60 family 42 146 5.1E-28 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CVS42_RS07030 6a8108aba5366b82de1f5de275f9296c 149 SUPERFAMILY SSF54001 24 148 1.21E-39 T 29-03-2018 CVS42_RS07030 6a8108aba5366b82de1f5de275f9296c 149 Gene3D G3DSA:3.90.1720.10 27 149 6.6E-36 T 29-03-2018 CVS42_RS04550 a163d1c53b7b64bdf2773ce4b62d64a0 532 Gene3D G3DSA:3.30.450.20 194 279 1.0E-5 T 29-03-2018 CVS42_RS04550 a163d1c53b7b64bdf2773ce4b62d64a0 532 Pfam PF00990 Diguanylate cyclase, GGDEF domain 379 522 6.7E-30 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS04550 a163d1c53b7b64bdf2773ce4b62d64a0 532 SMART SM00267 366 527 3.8E-34 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS04550 a163d1c53b7b64bdf2773ce4b62d64a0 532 SUPERFAMILY SSF55073 382 528 9.42E-33 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS04550 a163d1c53b7b64bdf2773ce4b62d64a0 532 Gene3D G3DSA:3.30.450.20 114 193 2.8E-11 T 29-03-2018 CVS42_RS04550 a163d1c53b7b64bdf2773ce4b62d64a0 532 Gene3D G3DSA:3.30.70.270 373 532 8.0E-39 T 29-03-2018 CVS42_RS04550 a163d1c53b7b64bdf2773ce4b62d64a0 532 Pfam PF02743 Cache domain 124 249 5.7E-16 T 29-03-2018 IPR033479 Double Cache domain 1 CVS42_RS04550 a163d1c53b7b64bdf2773ce4b62d64a0 532 SUPERFAMILY SSF103190 109 216 4.71E-7 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CVS42_RS04550 a163d1c53b7b64bdf2773ce4b62d64a0 532 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 378 524 2.2E-27 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS19945 fdd51a75860660785a90778be0556ad3 633 SUPERFAMILY SSF55785 194 305 2.79E-9 T 29-03-2018 IPR000014 PAS domain CVS42_RS19945 fdd51a75860660785a90778be0556ad3 633 SUPERFAMILY SSF46689 533 626 7.62E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS19945 fdd51a75860660785a90778be0556ad3 633 Gene3D G3DSA:3.30.450.20 181 317 1.3E-10 T 29-03-2018 CVS42_RS19945 fdd51a75860660785a90778be0556ad3 633 SMART SM00091 202 269 2.8E-4 T 29-03-2018 IPR000014 PAS domain CVS42_RS19945 fdd51a75860660785a90778be0556ad3 633 Pfam PF00989 PAS fold 203 309 2.6E-8 T 29-03-2018 IPR013767 PAS fold GO:0006355 CVS42_RS19945 fdd51a75860660785a90778be0556ad3 633 Gene3D G3DSA:1.10.8.60 496 562 6.1E-14 T 29-03-2018 CVS42_RS19945 fdd51a75860660785a90778be0556ad3 633 Pfam PF00158 Sigma-54 interaction domain 328 489 6.3E-33 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CVS42_RS19945 fdd51a75860660785a90778be0556ad3 633 SUPERFAMILY SSF52540 328 564 4.47E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS19945 fdd51a75860660785a90778be0556ad3 633 Gene3D G3DSA:3.40.50.300 324 495 9.3E-16 T 29-03-2018 CVS42_RS19945 fdd51a75860660785a90778be0556ad3 633 Pfam PF02954 Bacterial regulatory protein, Fis family 583 622 2.2E-11 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS19945 fdd51a75860660785a90778be0556ad3 633 Gene3D G3DSA:1.10.10.60 563 627 6.7E-16 T 29-03-2018 CVS42_RS04530 fcf1213a1daf7b6c0b9095fa6a0510a7 188 SUPERFAMILY SSF52499 2 186 4.97E-45 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CVS42_RS04530 fcf1213a1daf7b6c0b9095fa6a0510a7 188 Pfam PF00857 Isochorismatase family 4 184 1.6E-33 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CVS42_RS04530 fcf1213a1daf7b6c0b9095fa6a0510a7 188 Gene3D G3DSA:3.40.50.850 1 188 8.2E-40 T 29-03-2018 CVS42_RS07430 8e4b42fb9b7b95a6e0d3033e93271426 217 Gene3D G3DSA:3.40.30.10 1 102 8.5E-31 T 29-03-2018 CVS42_RS07430 8e4b42fb9b7b95a6e0d3033e93271426 217 Pfam PF14497 Glutathione S-transferase, C-terminal domain 126 201 1.2E-6 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CVS42_RS07430 8e4b42fb9b7b95a6e0d3033e93271426 217 Gene3D G3DSA:1.20.1050.10 103 217 2.6E-30 T 29-03-2018 CVS42_RS07430 8e4b42fb9b7b95a6e0d3033e93271426 217 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 83 1.7E-15 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CVS42_RS07430 8e4b42fb9b7b95a6e0d3033e93271426 217 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 8 215 2.1E-86 T 29-03-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 CVS42_RS07430 8e4b42fb9b7b95a6e0d3033e93271426 217 SUPERFAMILY SSF52833 5 89 1.66E-25 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS07430 8e4b42fb9b7b95a6e0d3033e93271426 217 SUPERFAMILY SSF47616 86 215 5.26E-33 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CVS42_RS18315 e9c5f87faf5606c4cef33f399334c843 112 SUPERFAMILY SSF54913 1 112 3.11E-44 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CVS42_RS18315 e9c5f87faf5606c4cef33f399334c843 112 SMART SM00938 4 105 3.5E-66 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CVS42_RS18315 e9c5f87faf5606c4cef33f399334c843 112 PRINTS PR00340 P-II protein signature 52 75 6.6E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CVS42_RS18315 e9c5f87faf5606c4cef33f399334c843 112 PRINTS PR00340 P-II protein signature 23 41 6.6E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CVS42_RS18315 e9c5f87faf5606c4cef33f399334c843 112 PRINTS PR00340 P-II protein signature 83 103 6.6E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CVS42_RS18315 e9c5f87faf5606c4cef33f399334c843 112 PRINTS PR00340 P-II protein signature 2 17 6.6E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CVS42_RS18315 e9c5f87faf5606c4cef33f399334c843 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 29-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CVS42_RS18315 e9c5f87faf5606c4cef33f399334c843 112 Gene3D G3DSA:3.30.70.120 1 108 1.8E-47 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CVS42_RS18315 e9c5f87faf5606c4cef33f399334c843 112 PIRSF PIRSF039144 1 112 9.6E-54 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CVS42_RS18315 e9c5f87faf5606c4cef33f399334c843 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.4E-42 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CVS42_RS18315 e9c5f87faf5606c4cef33f399334c843 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 29-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CVS42_RS07080 f5d02d441dd2a949ac10b8e83c04498b 658 Gene3D G3DSA:3.40.390.10 179 398 4.5E-31 T 29-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CVS42_RS07080 f5d02d441dd2a949ac10b8e83c04498b 658 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 182 374 6.7E-31 T 29-03-2018 CVS42_RS07080 f5d02d441dd2a949ac10b8e83c04498b 658 Gene3D G3DSA:2.60.40.10 399 526 7.0E-16 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS07080 f5d02d441dd2a949ac10b8e83c04498b 658 SUPERFAMILY SSF55486 187 391 2.28E-25 T 29-03-2018 CVS42_RS10705 e213abf3728b8a1b1d3da971f24996c7 348 Gene3D G3DSA:3.10.450.50 1 143 1.5E-13 T 29-03-2018 CVS42_RS10705 e213abf3728b8a1b1d3da971f24996c7 348 Pfam PF00990 Diguanylate cyclase, GGDEF domain 174 332 1.8E-51 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS10705 e213abf3728b8a1b1d3da971f24996c7 348 Pfam PF13474 SnoaL-like domain 9 130 7.2E-18 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CVS42_RS10705 e213abf3728b8a1b1d3da971f24996c7 348 SUPERFAMILY SSF54427 3 129 7.02E-12 T 29-03-2018 IPR032710 NTF2-like domain CVS42_RS10705 e213abf3728b8a1b1d3da971f24996c7 348 SUPERFAMILY SSF55073 178 338 4.08E-47 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS10705 e213abf3728b8a1b1d3da971f24996c7 348 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 169 337 4.2E-49 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS10705 e213abf3728b8a1b1d3da971f24996c7 348 Gene3D G3DSA:3.30.70.270 163 338 2.4E-51 T 29-03-2018 CVS42_RS10705 e213abf3728b8a1b1d3da971f24996c7 348 SMART SM00267 162 337 5.7E-66 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS17825 0bb3ee3097e25b58f08663fe53f10c01 297 Pfam PF03466 LysR substrate binding domain 94 289 1.6E-23 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS17825 0bb3ee3097e25b58f08663fe53f10c01 297 SUPERFAMILY SSF53850 93 295 2.71E-27 T 29-03-2018 CVS42_RS17825 0bb3ee3097e25b58f08663fe53f10c01 297 Gene3D G3DSA:3.40.190.10 91 176 2.3E-13 T 29-03-2018 CVS42_RS17825 0bb3ee3097e25b58f08663fe53f10c01 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS17825 0bb3ee3097e25b58f08663fe53f10c01 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS17825 0bb3ee3097e25b58f08663fe53f10c01 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS17825 0bb3ee3097e25b58f08663fe53f10c01 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 8.9E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS17825 0bb3ee3097e25b58f08663fe53f10c01 297 SUPERFAMILY SSF46785 3 85 1.27E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS17825 0bb3ee3097e25b58f08663fe53f10c01 297 Gene3D G3DSA:3.40.190.10 177 262 1.5E-9 T 29-03-2018 CVS42_RS17825 0bb3ee3097e25b58f08663fe53f10c01 297 Gene3D G3DSA:1.10.10.10 1 87 1.6E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS13985 10a0b7d47fad9717ae6c85666296ce1b 586 SUPERFAMILY SSF52540 49 168 3.99E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS13985 10a0b7d47fad9717ae6c85666296ce1b 586 SUPERFAMILY SSF52540 236 358 3.99E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS13985 10a0b7d47fad9717ae6c85666296ce1b 586 Gene3D G3DSA:3.40.50.300 228 365 2.3E-20 T 29-03-2018 CVS42_RS13985 10a0b7d47fad9717ae6c85666296ce1b 586 Pfam PF00271 Helicase conserved C-terminal domain 240 344 4.2E-14 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS13985 10a0b7d47fad9717ae6c85666296ce1b 586 Gene3D G3DSA:3.40.50.300 1 162 1.8E-28 T 29-03-2018 CVS42_RS13985 10a0b7d47fad9717ae6c85666296ce1b 586 SUPERFAMILY SSF57829 426 466 2.01E-7 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CVS42_RS13985 10a0b7d47fad9717ae6c85666296ce1b 586 SMART SM00487 1 191 3.0E-16 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS13985 10a0b7d47fad9717ae6c85666296ce1b 586 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 2.0E-23 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CVS42_RS13985 10a0b7d47fad9717ae6c85666296ce1b 586 SMART SM00490 265 346 6.1E-13 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS13810 e81193f684ed66adef2660037be2d27e 591 Gene3D G3DSA:2.40.160.50 238 590 1.0E-50 T 29-03-2018 CVS42_RS13810 e81193f684ed66adef2660037be2d27e 591 Pfam PF17243 POTRA domain TamA domain 1 46 116 1.4E-15 T 29-03-2018 IPR035243 TamA, POTRA domain 1 CVS42_RS13810 e81193f684ed66adef2660037be2d27e 591 Pfam PF01103 Surface antigen 302 588 4.0E-28 T 29-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CVS42_RS13810 e81193f684ed66adef2660037be2d27e 591 Pfam PF07244 Surface antigen variable number repeat 141 194 1.7E-4 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CVS42_RS13810 e81193f684ed66adef2660037be2d27e 591 Gene3D G3DSA:3.10.20.310 119 206 5.1E-15 T 29-03-2018 CVS42_RS06875 ed61e5746b93ebd06987ce0a306ae761 219 Gene3D G3DSA:1.20.5.1070 163 218 1.5E-4 T 29-03-2018 CVS42_RS06875 ed61e5746b93ebd06987ce0a306ae761 219 SUPERFAMILY SSF46785 90 172 6.96E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS06875 ed61e5746b93ebd06987ce0a306ae761 219 SUPERFAMILY SSF46785 3 84 1.54E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS06875 ed61e5746b93ebd06987ce0a306ae761 219 Pfam PF04337 Protein of unknown function, DUF480 6 156 7.0E-62 T 29-03-2018 IPR007432 Protein of unknown function DUF480 CVS42_RS06875 ed61e5746b93ebd06987ce0a306ae761 219 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 217 35.159 T 29-03-2018 IPR007432 Protein of unknown function DUF480 CVS42_RS06875 ed61e5746b93ebd06987ce0a306ae761 219 Gene3D G3DSA:1.10.10.10 2 87 4.7E-34 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS06875 ed61e5746b93ebd06987ce0a306ae761 219 Gene3D G3DSA:1.10.10.10 97 162 2.3E-33 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS19590 e12474348686b0d93e151378c0914a2a 462 Gene3D G3DSA:1.10.3080.10 18 453 3.1E-102 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CVS42_RS19590 e12474348686b0d93e151378c0914a2a 462 Pfam PF00654 Voltage gated chloride channel 83 430 8.2E-91 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CVS42_RS19590 e12474348686b0d93e151378c0914a2a 462 PRINTS PR00762 Chloride channel signature 345 365 9.2E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CVS42_RS19590 e12474348686b0d93e151378c0914a2a 462 PRINTS PR00762 Chloride channel signature 380 396 9.2E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CVS42_RS19590 e12474348686b0d93e151378c0914a2a 462 PRINTS PR00762 Chloride channel signature 398 417 9.2E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CVS42_RS19590 e12474348686b0d93e151378c0914a2a 462 PRINTS PR00762 Chloride channel signature 176 195 9.2E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CVS42_RS19590 e12474348686b0d93e151378c0914a2a 462 PRINTS PR00762 Chloride channel signature 96 113 9.2E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CVS42_RS19590 e12474348686b0d93e151378c0914a2a 462 SUPERFAMILY SSF81340 20 445 2.22E-106 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CVS42_RS02135 be0a3cdba49b0fbdc8c96f3369d00f3f 173 Pfam PF05068 Mannitol repressor 5 167 5.8E-60 T 29-03-2018 IPR007761 Mannitol repressor MtlR-like CVS42_RS02135 be0a3cdba49b0fbdc8c96f3369d00f3f 173 SUPERFAMILY SSF158668 1 167 2.62E-56 T 29-03-2018 CVS42_RS02135 be0a3cdba49b0fbdc8c96f3369d00f3f 173 Gene3D G3DSA:1.20.120.330 4 167 2.7E-50 T 29-03-2018 CVS42_RS19565 eb6bfd29efbddcc654671c187bbd5d34 117 Pfam PF10719 Late competence development protein ComFB 35 113 1.6E-18 T 29-03-2018 IPR019657 Late competence development protein ComFB CVS42_RS07625 66a1defcba438c74e9618873a2c48de5 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.4E-68 T 29-03-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CVS42_RS07625 66a1defcba438c74e9618873a2c48de5 127 Pfam PF01592 NifU-like N terminal domain 2 125 2.0E-56 T 29-03-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CVS42_RS07625 66a1defcba438c74e9618873a2c48de5 127 SUPERFAMILY SSF82649 1 125 3.66E-49 T 29-03-2018 CVS42_RS07625 66a1defcba438c74e9618873a2c48de5 127 Gene3D G3DSA:3.90.1010.10 1 127 3.0E-52 T 29-03-2018 CVS42_RS07300 08f9c94e3d55f17253096f79281fabcb 550 Gene3D G3DSA:2.40.430.10 125 218 1.1E-20 T 29-03-2018 CVS42_RS07300 08f9c94e3d55f17253096f79281fabcb 550 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 105 295 2.8E-50 T 29-03-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain CVS42_RS07300 08f9c94e3d55f17253096f79281fabcb 550 Gene3D G3DSA:1.20.58.370 13 100 3.3E-27 T 29-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain CVS42_RS07300 08f9c94e3d55f17253096f79281fabcb 550 Gene3D G3DSA:1.10.3720.10 306 547 1.7E-42 T 29-03-2018 CVS42_RS07300 08f9c94e3d55f17253096f79281fabcb 550 SUPERFAMILY SSF161098 296 538 5.63E-60 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS07300 08f9c94e3d55f17253096f79281fabcb 550 SUPERFAMILY SSF160964 19 295 1.44E-66 T 29-03-2018 CVS42_RS07300 08f9c94e3d55f17253096f79281fabcb 550 Gene3D G3DSA:3.10.650.10 219 304 2.4E-22 T 29-03-2018 CVS42_RS07300 08f9c94e3d55f17253096f79281fabcb 550 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 333 537 6.3E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS13210 e4d1061fceb955ef99a21313bef7bf1f 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 8.4E-64 T 29-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CVS42_RS13210 e4d1061fceb955ef99a21313bef7bf1f 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 48.881 T 29-03-2018 IPR022987 Uncharacterised protein family UPF0227 CVS42_RS21960 91290f8cbe156f78dc0435cf977bd4de 261 SUPERFAMILY SSF51556 1 257 8.35E-80 T 29-03-2018 IPR032466 Metal-dependent hydrolase CVS42_RS21960 91290f8cbe156f78dc0435cf977bd4de 261 PIRSF PIRSF005902 1 260 2.1E-71 T 29-03-2018 IPR001130 TatD family GO:0016788 CVS42_RS21960 91290f8cbe156f78dc0435cf977bd4de 261 Pfam PF01026 TatD related DNase 2 256 4.3E-65 T 29-03-2018 IPR001130 TatD family GO:0016788 CVS42_RS21960 91290f8cbe156f78dc0435cf977bd4de 261 Gene3D G3DSA:3.20.20.140 1 261 8.5E-84 T 29-03-2018 CVS42_RS01180 74d3e0e4e6e6cef227ab6d8b063533d9 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 2.8E-23 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01180 74d3e0e4e6e6cef227ab6d8b063533d9 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 3.0E-8 T 29-03-2018 CVS42_RS01180 74d3e0e4e6e6cef227ab6d8b063533d9 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01180 74d3e0e4e6e6cef227ab6d8b063533d9 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 16.791 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01180 74d3e0e4e6e6cef227ab6d8b063533d9 37 Pfam PF00444 Ribosomal protein L36 1 37 2.6E-18 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01180 74d3e0e4e6e6cef227ab6d8b063533d9 37 SUPERFAMILY SSF57840 1 37 1.7E-16 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS13745 fb829281b5eb6eddb07e08b11fb622cc 310 PRINTS PR01398 Isochorismatase signature 80 99 6.2E-43 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CVS42_RS13745 fb829281b5eb6eddb07e08b11fb622cc 310 PRINTS PR01398 Isochorismatase signature 168 186 6.2E-43 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CVS42_RS13745 fb829281b5eb6eddb07e08b11fb622cc 310 PRINTS PR01398 Isochorismatase signature 2 14 6.2E-43 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CVS42_RS13745 fb829281b5eb6eddb07e08b11fb622cc 310 PRINTS PR01398 Isochorismatase signature 112 134 6.2E-43 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CVS42_RS13745 fb829281b5eb6eddb07e08b11fb622cc 310 PRINTS PR01398 Isochorismatase signature 186 203 6.2E-43 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CVS42_RS13745 fb829281b5eb6eddb07e08b11fb622cc 310 PRINTS PR01398 Isochorismatase signature 63 80 6.2E-43 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CVS42_RS13745 fb829281b5eb6eddb07e08b11fb622cc 310 PIRSF PIRSF001111 1 292 2.5E-120 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CVS42_RS13745 fb829281b5eb6eddb07e08b11fb622cc 310 SUPERFAMILY SSF52499 1 219 1.22E-65 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CVS42_RS13745 fb829281b5eb6eddb07e08b11fb622cc 310 Pfam PF00857 Isochorismatase family 32 205 4.7E-37 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CVS42_RS13745 fb829281b5eb6eddb07e08b11fb622cc 310 Pfam PF00550 Phosphopantetheine attachment site 232 279 1.4E-5 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CVS42_RS13745 fb829281b5eb6eddb07e08b11fb622cc 310 Gene3D G3DSA:3.40.50.850 1 209 2.0E-48 T 29-03-2018 CVS42_RS13745 fb829281b5eb6eddb07e08b11fb622cc 310 SUPERFAMILY SSF47336 214 296 1.57E-8 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CVS42_RS13745 fb829281b5eb6eddb07e08b11fb622cc 310 Gene3D G3DSA:1.10.1200.10 213 289 3.0E-9 T 29-03-2018 CVS42_RS10875 2627f5cff6c9a49edfa479bc082e0db0 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CVS42_RS10875 2627f5cff6c9a49edfa479bc082e0db0 260 SUPERFAMILY SSF52096 2 255 4.32E-77 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS10875 2627f5cff6c9a49edfa479bc082e0db0 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 255 2.6E-53 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CVS42_RS10875 2627f5cff6c9a49edfa479bc082e0db0 260 Gene3D G3DSA:1.10.12.10 215 257 1.3E-16 T 29-03-2018 IPR014748 Crontonase, C-terminal CVS42_RS10875 2627f5cff6c9a49edfa479bc082e0db0 260 Gene3D G3DSA:3.90.226.10 3 214 4.3E-62 T 29-03-2018 CVS42_RS12665 b627bed45a4c8696242be019938120c0 192 Gene3D G3DSA:3.30.70.20 25 125 2.7E-10 T 29-03-2018 CVS42_RS12665 b627bed45a4c8696242be019938120c0 192 Pfam PF04060 Putative Fe-S cluster 44 75 6.2E-14 T 29-03-2018 IPR007202 4Fe-4S domain GO:0051536 CVS42_RS12665 b627bed45a4c8696242be019938120c0 192 Gene3D G3DSA:3.30.70.20 126 147 2.0E-10 T 29-03-2018 CVS42_RS12665 b627bed45a4c8696242be019938120c0 192 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 190 43.557 T 29-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CVS42_RS12665 b627bed45a4c8696242be019938120c0 192 PIRSF PIRSF005784 3 189 7.3E-87 T 29-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CVS42_RS12665 b627bed45a4c8696242be019938120c0 192 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 3 181 8.9E-86 T 29-03-2018 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 CVS42_RS12665 b627bed45a4c8696242be019938120c0 192 Pfam PF14697 4Fe-4S dicluster domain 109 163 9.9E-18 T 29-03-2018 CVS42_RS12665 b627bed45a4c8696242be019938120c0 192 Gene3D G3DSA:3.30.70.20 148 182 8.6E-6 T 29-03-2018 CVS42_RS12665 b627bed45a4c8696242be019938120c0 192 SUPERFAMILY SSF54862 37 175 2.28E-31 T 29-03-2018 CVS42_RS12665 b627bed45a4c8696242be019938120c0 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS01175 61f53933c604de4d9fcbfd813b26b8a3 442 SUPERFAMILY SSF103491 14 423 3.66E-130 T 29-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CVS42_RS01175 61f53933c604de4d9fcbfd813b26b8a3 442 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 432 29.322 T 29-03-2018 IPR026593 Protein translocase subunit SecY CVS42_RS01175 61f53933c604de4d9fcbfd813b26b8a3 442 Gene3D G3DSA:1.10.3370.10 8 438 1.1E-155 T 29-03-2018 CVS42_RS01175 61f53933c604de4d9fcbfd813b26b8a3 442 PIRSF PIRSF004557 6 440 1.9E-120 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CVS42_RS01175 61f53933c604de4d9fcbfd813b26b8a3 442 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 19 428 4.3E-134 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CVS42_RS01175 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 2.4E-92 T 29-03-2018 CVS42_RS01175 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 269 288 2.4E-92 T 29-03-2018 CVS42_RS01175 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 151 176 2.4E-92 T 29-03-2018 CVS42_RS01175 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 2.4E-92 T 29-03-2018 CVS42_RS01175 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 177 200 2.4E-92 T 29-03-2018 CVS42_RS01175 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 369 387 2.4E-92 T 29-03-2018 CVS42_RS01175 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 314 336 2.4E-92 T 29-03-2018 CVS42_RS01175 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 401 419 2.4E-92 T 29-03-2018 CVS42_RS01175 61f53933c604de4d9fcbfd813b26b8a3 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 22 40 2.4E-92 T 29-03-2018 CVS42_RS01175 61f53933c604de4d9fcbfd813b26b8a3 442 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 29-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CVS42_RS01175 61f53933c604de4d9fcbfd813b26b8a3 442 ProSitePatterns PS00756 Protein secY signature 2. 170 187 - T 29-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CVS42_RS01175 61f53933c604de4d9fcbfd813b26b8a3 442 Pfam PF00344 SecY translocase 75 416 5.3E-116 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CVS42_RS15050 1330284a2515efc70b53d8ed8c439b8c 501 SUPERFAMILY SSF160246 16 80 1.02E-15 T 29-03-2018 CVS42_RS15050 1330284a2515efc70b53d8ed8c439b8c 501 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 321 335 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CVS42_RS15050 1330284a2515efc70b53d8ed8c439b8c 501 SUPERFAMILY SSF52540 110 498 3.64E-106 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS15050 1330284a2515efc70b53d8ed8c439b8c 501 Gene3D G3DSA:3.40.50.300 227 501 2.8E-62 T 29-03-2018 CVS42_RS15050 1330284a2515efc70b53d8ed8c439b8c 501 SMART SM00382 254 380 2.3E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS15050 1330284a2515efc70b53d8ed8c439b8c 501 Gene3D G3DSA:3.30.450.90 90 226 1.6E-48 T 29-03-2018 CVS42_RS15050 1330284a2515efc70b53d8ed8c439b8c 501 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 17 498 6.5E-213 T 29-03-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 CVS42_RS15050 1330284a2515efc70b53d8ed8c439b8c 501 Pfam PF00437 Type II/IV secretion system protein 127 393 1.2E-93 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CVS42_RS14535 1124c93081b443017811ec994c0eb7f4 182 SUPERFAMILY SSF51182 1 179 2.47E-82 T 29-03-2018 IPR011051 RmlC-like cupin domain CVS42_RS14535 1124c93081b443017811ec994c0eb7f4 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 177 2.0E-75 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CVS42_RS14535 1124c93081b443017811ec994c0eb7f4 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 178 3.7E-85 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CVS42_RS14535 1124c93081b443017811ec994c0eb7f4 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 177 1.8E-76 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CVS42_RS14535 1124c93081b443017811ec994c0eb7f4 182 Gene3D G3DSA:2.60.120.10 1 181 6.8E-80 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS01325 5fd5d2be5d1c5ca7013d538e62280830 254 Gene3D G3DSA:1.10.10.10 2 71 7.2E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS01325 5fd5d2be5d1c5ca7013d538e62280830 254 Pfam PF07702 UTRA domain 94 231 2.3E-30 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CVS42_RS01325 5fd5d2be5d1c5ca7013d538e62280830 254 SUPERFAMILY SSF64288 60 235 6.75E-39 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CVS42_RS01325 5fd5d2be5d1c5ca7013d538e62280830 254 SUPERFAMILY SSF46785 6 76 3.26E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS01325 5fd5d2be5d1c5ca7013d538e62280830 254 SMART SM00345 13 72 3.6E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS01325 5fd5d2be5d1c5ca7013d538e62280830 254 Gene3D G3DSA:3.40.1410.10 72 239 1.1E-30 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CVS42_RS01325 5fd5d2be5d1c5ca7013d538e62280830 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 72 7.0E-18 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS01325 5fd5d2be5d1c5ca7013d538e62280830 254 SMART SM00866 93 232 5.3E-30 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CVS42_RS01325 5fd5d2be5d1c5ca7013d538e62280830 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 2.9E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS01325 5fd5d2be5d1c5ca7013d538e62280830 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 2.9E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS12270 7802a435fb4db507a3d08dfeead571df 109 SUPERFAMILY SSF55159 11 105 2.49E-18 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CVS42_RS12270 7802a435fb4db507a3d08dfeead571df 109 Pfam PF01253 Translation initiation factor SUI1 34 102 1.3E-12 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CVS42_RS12270 7802a435fb4db507a3d08dfeead571df 109 PIRSF PIRSF037511 1 109 1.9E-30 T 29-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 CVS42_RS12270 7802a435fb4db507a3d08dfeead571df 109 Gene3D G3DSA:3.30.780.10 18 107 1.4E-14 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CVS42_RS12340 1bbada311686aa1a216aa1125979cc52 82 Pfam PF04226 Transglycosylase associated protein 34 81 5.6E-12 T 29-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 CVS42_RS00540 d461b80279c614a37ee8b8fe54734661 386 Pfam PF12996 DUF based on E. rectale Gene description (DUF3880) 75 144 1.5E-11 T 29-03-2018 IPR024542 Domain of unknown function DUF3880 CVS42_RS00540 d461b80279c614a37ee8b8fe54734661 386 Gene3D G3DSA:3.40.50.2000 59 352 1.9E-13 T 29-03-2018 CVS42_RS00540 d461b80279c614a37ee8b8fe54734661 386 Pfam PF13524 Glycosyl transferases group 1 268 360 1.5E-25 T 29-03-2018 CVS42_RS11980 ac2b700894655faa410aac93986775c7 299 Pfam PF00248 Aldo/keto reductase family 17 292 4.7E-58 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CVS42_RS11980 ac2b700894655faa410aac93986775c7 299 SUPERFAMILY SSF51430 8 296 7.07E-73 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CVS42_RS11980 ac2b700894655faa410aac93986775c7 299 Gene3D G3DSA:3.20.20.100 1 299 1.5E-64 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CVS42_RS11980 ac2b700894655faa410aac93986775c7 299 PRINTS PR00069 Aldo-keto reductase signature 113 131 2.1E-6 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CVS42_RS11980 ac2b700894655faa410aac93986775c7 299 PRINTS PR00069 Aldo-keto reductase signature 144 161 2.1E-6 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CVS42_RS02205 4c0981958be170a35c8a494cd7b78dd8 418 Gene3D G3DSA:1.20.1250.20 219 415 6.4E-11 T 29-03-2018 CVS42_RS02205 4c0981958be170a35c8a494cd7b78dd8 418 Gene3D G3DSA:1.20.1250.20 17 209 3.8E-29 T 29-03-2018 CVS42_RS02205 4c0981958be170a35c8a494cd7b78dd8 418 Pfam PF07690 Major Facilitator Superfamily 33 304 3.0E-34 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS02205 4c0981958be170a35c8a494cd7b78dd8 418 SUPERFAMILY SSF103473 28 407 8.24E-51 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS17195 b46901735507e754feebf4ca6d15addc 273 Pfam PF00149 Calcineurin-like phosphoesterase 5 133 9.8E-13 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CVS42_RS17195 b46901735507e754feebf4ca6d15addc 273 Gene3D G3DSA:3.60.21.10 4 273 1.6E-44 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS17195 b46901735507e754feebf4ca6d15addc 273 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 265 1.2E-110 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CVS42_RS17195 b46901735507e754feebf4ca6d15addc 273 SUPERFAMILY SSF56300 4 258 1.6E-60 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS17195 b46901735507e754feebf4ca6d15addc 273 PIRSF PIRSF000903 1 273 1.5E-115 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CVS42_RS17195 b46901735507e754feebf4ca6d15addc 273 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 47.23 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CVS42_RS04895 04661dae225ede2095d8a5982b554859 223 Gene3D G3DSA:1.10.10.10 162 220 1.7E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS04895 04661dae225ede2095d8a5982b554859 223 SUPERFAMILY SSF51206 15 142 1.31E-18 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CVS42_RS04895 04661dae225ede2095d8a5982b554859 223 SMART SM00100 14 134 2.8E-4 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CVS42_RS04895 04661dae225ede2095d8a5982b554859 223 Gene3D G3DSA:2.60.120.10 14 148 4.0E-15 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS04895 04661dae225ede2095d8a5982b554859 223 Pfam PF00027 Cyclic nucleotide-binding domain 34 115 1.5E-11 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CVS42_RS08680 344c95e075ea6036d73df9368f307c0f 196 Pfam PF00578 AhpC/TSA family 39 148 3.9E-11 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CVS42_RS08680 344c95e075ea6036d73df9368f307c0f 196 SUPERFAMILY SSF52833 50 172 8.67E-32 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS08680 344c95e075ea6036d73df9368f307c0f 196 Gene3D G3DSA:3.40.30.10 31 180 5.6E-25 T 29-03-2018 CVS42_RS08680 344c95e075ea6036d73df9368f307c0f 196 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 7 170 8.6E-48 T 29-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 CVS42_RS12760 34e1ac919756ca63b7a49a9fee12a7b8 217 SUPERFAMILY SSF100950 1 147 1.78E-45 T 29-03-2018 CVS42_RS12760 34e1ac919756ca63b7a49a9fee12a7b8 217 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 1.7E-66 T 29-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CVS42_RS12760 34e1ac919756ca63b7a49a9fee12a7b8 217 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 2.4E-57 T 29-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CVS42_RS12760 34e1ac919756ca63b7a49a9fee12a7b8 217 SUPERFAMILY SSF75445 127 198 1.7E-23 T 29-03-2018 CVS42_RS12760 34e1ac919756ca63b7a49a9fee12a7b8 217 Gene3D G3DSA:3.30.70.260 138 196 2.2E-24 T 29-03-2018 CVS42_RS12760 34e1ac919756ca63b7a49a9fee12a7b8 217 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 32.572 T 29-03-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CVS42_RS12760 34e1ac919756ca63b7a49a9fee12a7b8 217 Gene3D G3DSA:3.40.50.1360 1 137 2.1E-39 T 29-03-2018 CVS42_RS06600 154c21dbb1fb6a45bbee4a2b8c94a3ed 404 Pfam PF00155 Aminotransferase class I and II 36 395 1.1E-46 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CVS42_RS06600 154c21dbb1fb6a45bbee4a2b8c94a3ed 404 Gene3D G3DSA:3.90.1150.10 281 404 3.0E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS06600 154c21dbb1fb6a45bbee4a2b8c94a3ed 404 SUPERFAMILY SSF53383 5 400 9.93E-97 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS06600 154c21dbb1fb6a45bbee4a2b8c94a3ed 404 Gene3D G3DSA:3.40.640.10 53 280 3.0E-48 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS20345 f108902f13746b406aeff67ea64c21d7 508 SUPERFAMILY SSF141868 261 502 2.62E-70 T 29-03-2018 IPR001633 EAL domain CVS42_RS20345 f108902f13746b406aeff67ea64c21d7 508 Gene3D G3DSA:3.20.20.450 256 508 1.7E-69 T 29-03-2018 IPR001633 EAL domain CVS42_RS20345 f108902f13746b406aeff67ea64c21d7 508 Pfam PF00563 EAL domain 262 487 1.5E-59 T 29-03-2018 IPR001633 EAL domain CVS42_RS20345 f108902f13746b406aeff67ea64c21d7 508 SMART SM00052 254 492 4.2E-76 T 29-03-2018 IPR001633 EAL domain CVS42_RS09750 6e2a55422aab22237250fdc93414bc9b 315 Gene3D G3DSA:3.40.50.620 156 304 4.4E-20 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS09750 6e2a55422aab22237250fdc93414bc9b 315 SUPERFAMILY SSF52402 156 305 3.85E-24 T 29-03-2018 CVS42_RS09750 6e2a55422aab22237250fdc93414bc9b 315 SUPERFAMILY SSF52402 4 157 4.02E-32 T 29-03-2018 CVS42_RS09750 6e2a55422aab22237250fdc93414bc9b 315 Gene3D G3DSA:3.40.50.620 2 151 4.1E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS09750 6e2a55422aab22237250fdc93414bc9b 315 Pfam PF00582 Universal stress protein family 179 300 1.2E-12 T 29-03-2018 IPR006016 UspA GO:0006950 CVS42_RS09750 6e2a55422aab22237250fdc93414bc9b 315 Pfam PF00582 Universal stress protein family 4 147 1.2E-20 T 29-03-2018 IPR006016 UspA GO:0006950 CVS42_RS05035 6fc9412450363ff7a8eaddbd1604d2e1 183 Gene3D G3DSA:1.20.120.520 1 174 3.6E-15 T 29-03-2018 CVS42_RS05035 6fc9412450363ff7a8eaddbd1604d2e1 183 Pfam PF01814 Hemerythrin HHE cation binding domain 4 135 1.0E-9 T 29-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CVS42_RS17160 faa807d8295d03b91fdae5bae700e10e 222 SUPERFAMILY SSF53448 1 217 6.98E-51 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS17160 faa807d8295d03b91fdae5bae700e10e 222 Pfam PF00483 Nucleotidyl transferase 2 147 7.3E-21 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CVS42_RS17160 faa807d8295d03b91fdae5bae700e10e 222 Gene3D G3DSA:3.90.550.10 1 222 1.7E-36 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS07305 2d014c4d164dc1f37e6d94e9c81816c4 296 SUPERFAMILY SSF161098 10 296 4.71E-67 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS07305 2d014c4d164dc1f37e6d94e9c81816c4 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 5.4E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS07305 2d014c4d164dc1f37e6d94e9c81816c4 296 Gene3D G3DSA:1.10.3720.10 1 283 3.1E-42 T 29-03-2018 CVS42_RS03330 82a67f73317c0420a8dd70517fd2057e 198 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 118 186 1.7E-11 T 29-03-2018 IPR018660 C-type lysozyme inhibitor CVS42_RS03330 82a67f73317c0420a8dd70517fd2057e 198 SUPERFAMILY SSF141488 115 192 4.05E-15 T 29-03-2018 IPR018660 C-type lysozyme inhibitor CVS42_RS03330 82a67f73317c0420a8dd70517fd2057e 198 Pfam PF07007 Lysozyme inhibitor LprI 25 83 8.1E-5 T 29-03-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal CVS42_RS12170 8bb70aa7cdf634be8eb53e9d6b0d1386 512 SUPERFAMILY SSF55781 144 297 6.11E-11 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS12170 8bb70aa7cdf634be8eb53e9d6b0d1386 512 SUPERFAMILY SSF109604 332 502 1.12E-34 T 29-03-2018 CVS42_RS12170 8bb70aa7cdf634be8eb53e9d6b0d1386 512 Pfam PF13487 HD domain 392 453 4.8E-19 T 29-03-2018 CVS42_RS12170 8bb70aa7cdf634be8eb53e9d6b0d1386 512 Gene3D G3DSA:3.30.450.40 143 298 5.7E-13 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS12170 8bb70aa7cdf634be8eb53e9d6b0d1386 512 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 25 143 2.0E-8 T 29-03-2018 IPR000014 PAS domain CVS42_RS12170 8bb70aa7cdf634be8eb53e9d6b0d1386 512 Gene3D G3DSA:3.30.450.20 13 142 7.4E-20 T 29-03-2018 CVS42_RS12170 8bb70aa7cdf634be8eb53e9d6b0d1386 512 Pfam PF08448 PAS fold 30 137 5.9E-18 T 29-03-2018 IPR013656 PAS fold-4 CVS42_RS12170 8bb70aa7cdf634be8eb53e9d6b0d1386 512 SUPERFAMILY SSF55785 36 145 2.74E-16 T 29-03-2018 IPR000014 PAS domain CVS42_RS12170 8bb70aa7cdf634be8eb53e9d6b0d1386 512 Gene3D G3DSA:1.10.3210.10 299 508 1.9E-49 T 29-03-2018 CVS42_RS12170 8bb70aa7cdf634be8eb53e9d6b0d1386 512 SMART SM00471 336 471 4.5E-10 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS01945 83a9424ee0738125457e346eadc73c06 542 SUPERFAMILY SSF51445 60 463 1.3E-71 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS01945 83a9424ee0738125457e346eadc73c06 542 SMART SM00642 66 453 4.9E-39 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS01945 83a9424ee0738125457e346eadc73c06 542 Gene3D G3DSA:3.20.20.80 51 459 1.5E-66 T 29-03-2018 CVS42_RS01945 83a9424ee0738125457e346eadc73c06 542 Pfam PF00128 Alpha amylase, catalytic domain 92 177 2.1E-23 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS01945 83a9424ee0738125457e346eadc73c06 542 Pfam PF00128 Alpha amylase, catalytic domain 206 396 1.3E-16 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CVS42_RS01945 83a9424ee0738125457e346eadc73c06 542 Gene3D G3DSA:2.60.40.1180 460 542 2.6E-10 T 29-03-2018 CVS42_RS01945 83a9424ee0738125457e346eadc73c06 542 SUPERFAMILY SSF51011 471 539 1.87E-7 T 29-03-2018 CVS42_RS06980 53477f32e1af3a99a1b3fe51a0f1bd49 630 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 530 620 7.3E-18 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CVS42_RS06980 53477f32e1af3a99a1b3fe51a0f1bd49 630 Gene3D G3DSA:3.40.50.2300 527 626 2.3E-35 T 29-03-2018 CVS42_RS06980 53477f32e1af3a99a1b3fe51a0f1bd49 630 Gene3D G3DSA:3.40.930.10 3 148 3.2E-38 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CVS42_RS06980 53477f32e1af3a99a1b3fe51a0f1bd49 630 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 530 612 1.3E-28 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CVS42_RS06980 53477f32e1af3a99a1b3fe51a0f1bd49 630 SUPERFAMILY SSF52794 528 626 1.03E-31 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CVS42_RS06980 53477f32e1af3a99a1b3fe51a0f1bd49 630 Pfam PF02378 Phosphotransferase system, EIIC 191 448 1.3E-14 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CVS42_RS06980 53477f32e1af3a99a1b3fe51a0f1bd49 630 SUPERFAMILY SSF55804 4 147 1.02E-36 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CVS42_RS06980 53477f32e1af3a99a1b3fe51a0f1bd49 630 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 1.4E-34 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CVS42_RS06980 53477f32e1af3a99a1b3fe51a0f1bd49 630 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 172 501 1.3E-82 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CVS42_RS06980 53477f32e1af3a99a1b3fe51a0f1bd49 630 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 131 4.9E-39 T 29-03-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 CVS42_RS12915 16c0ba58e28112f950d746131749ad4b 310 Pfam PF02535 ZIP Zinc transporter 159 305 1.6E-25 T 29-03-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 CVS42_RS03570 8680c43ea384e26512dd414e8012f5f1 348 SUPERFAMILY SSF51412 4 324 2.29E-62 T 29-03-2018 CVS42_RS03570 8680c43ea384e26512dd414e8012f5f1 348 Pfam PF03060 Nitronate monooxygenase 7 338 9.7E-73 T 29-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CVS42_RS03570 8680c43ea384e26512dd414e8012f5f1 348 Gene3D G3DSA:3.20.20.70 1 346 2.4E-45 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS18020 8cf2238d1dc6724194f49f6329d840c9 443 SUPERFAMILY SSF52418 72 334 9.68E-89 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS18020 8cf2238d1dc6724194f49f6329d840c9 443 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 3.2E-22 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS18020 8cf2238d1dc6724194f49f6329d840c9 443 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 29-03-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS18020 8cf2238d1dc6724194f49f6329d840c9 443 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 8.6E-20 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS18020 8cf2238d1dc6724194f49f6329d840c9 443 SUPERFAMILY SSF54680 337 438 9.29E-31 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS18020 8cf2238d1dc6724194f49f6329d840c9 443 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 6.8E-222 T 29-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 CVS42_RS18020 8cf2238d1dc6724194f49f6329d840c9 443 Gene3D G3DSA:3.90.1170.30 343 429 3.3E-27 T 29-03-2018 CVS42_RS18020 8cf2238d1dc6724194f49f6329d840c9 443 PIRSF PIRSF000478 1 439 4.5E-151 T 29-03-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS18020 8cf2238d1dc6724194f49f6329d840c9 443 Gene3D G3DSA:1.20.970.10 3 67 3.3E-23 T 29-03-2018 CVS42_RS18020 8cf2238d1dc6724194f49f6329d840c9 443 Gene3D G3DSA:3.40.1030.10 69 342 5.4E-81 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS18020 8cf2238d1dc6724194f49f6329d840c9 443 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 4.1E-161 T 29-03-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS18020 8cf2238d1dc6724194f49f6329d840c9 443 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 438 47.031 T 29-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 CVS42_RS18020 8cf2238d1dc6724194f49f6329d840c9 443 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 5.0E-45 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS18020 8cf2238d1dc6724194f49f6329d840c9 443 SMART SM00941 350 424 1.3E-28 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS18020 8cf2238d1dc6724194f49f6329d840c9 443 SUPERFAMILY SSF47648 2 70 1.7E-22 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS14640 f9932ad72659466a7558a75d48bd1d20 331 Hamap MF_00384 Homoserine kinase [thrB]. 16 326 28.437 T 29-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CVS42_RS14640 f9932ad72659466a7558a75d48bd1d20 331 Pfam PF00288 GHMP kinases N terminal domain 103 169 5.7E-13 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CVS42_RS14640 f9932ad72659466a7558a75d48bd1d20 331 Pfam PF08544 GHMP kinases C terminal 246 307 1.6E-8 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CVS42_RS14640 f9932ad72659466a7558a75d48bd1d20 331 SUPERFAMILY SSF54211 17 204 3.87E-28 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS14640 f9932ad72659466a7558a75d48bd1d20 331 Gene3D G3DSA:3.30.70.890 188 322 3.6E-25 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CVS42_RS14640 f9932ad72659466a7558a75d48bd1d20 331 PRINTS PR00958 Homoserine kinase signature 23 38 1.3E-30 T 29-03-2018 CVS42_RS14640 f9932ad72659466a7558a75d48bd1d20 331 PRINTS PR00958 Homoserine kinase signature 116 131 1.3E-30 T 29-03-2018 CVS42_RS14640 f9932ad72659466a7558a75d48bd1d20 331 PRINTS PR00958 Homoserine kinase signature 156 169 1.3E-30 T 29-03-2018 CVS42_RS14640 f9932ad72659466a7558a75d48bd1d20 331 PRINTS PR00958 Homoserine kinase signature 194 211 1.3E-30 T 29-03-2018 CVS42_RS14640 f9932ad72659466a7558a75d48bd1d20 331 PRINTS PR00958 Homoserine kinase signature 273 288 1.3E-30 T 29-03-2018 CVS42_RS14640 f9932ad72659466a7558a75d48bd1d20 331 SUPERFAMILY SSF55060 191 307 3.35E-28 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CVS42_RS14640 f9932ad72659466a7558a75d48bd1d20 331 TIGRFAM TIGR00191 thrB: homoserine kinase 18 327 1.0E-93 T 29-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CVS42_RS14640 f9932ad72659466a7558a75d48bd1d20 331 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 109 120 - T 29-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CVS42_RS14640 f9932ad72659466a7558a75d48bd1d20 331 Gene3D G3DSA:3.30.230.10 14 180 2.6E-22 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CVS42_RS14640 f9932ad72659466a7558a75d48bd1d20 331 PIRSF PIRSF000676 13 329 1.5E-77 T 29-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CVS42_RS01950 0b02d1e26e9a21c3828f2b017d287479 479 Gene3D G3DSA:3.40.50.20 165 276 1.1E-19 T 29-03-2018 CVS42_RS01950 0b02d1e26e9a21c3828f2b017d287479 479 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 24 164 2.2E-33 T 29-03-2018 IPR025839 RimK-like ATPgrasp N-terminal domain CVS42_RS01950 0b02d1e26e9a21c3828f2b017d287479 479 SUPERFAMILY SSF56059 264 465 3.72E-27 T 29-03-2018 CVS42_RS01950 0b02d1e26e9a21c3828f2b017d287479 479 Gene3D G3DSA:3.30.1490.20 277 344 1.5E-11 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CVS42_RS01950 0b02d1e26e9a21c3828f2b017d287479 479 Gene3D G3DSA:3.30.470.20 345 457 6.9E-14 T 29-03-2018 CVS42_RS16590 e471866e278156a93bd30793af3208e4 352 Pfam PF01339 CheB methylesterase 171 347 6.8E-60 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CVS42_RS16590 e471866e278156a93bd30793af3208e4 352 Gene3D G3DSA:3.40.50.180 159 351 7.5E-74 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CVS42_RS16590 e471866e278156a93bd30793af3208e4 352 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 352 39.1 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CVS42_RS16590 e471866e278156a93bd30793af3208e4 352 PIRSF PIRSF000876 1 352 3.5E-132 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CVS42_RS16590 e471866e278156a93bd30793af3208e4 352 SMART SM00448 4 120 2.6E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS16590 e471866e278156a93bd30793af3208e4 352 SUPERFAMILY SSF52738 166 350 5.1E-70 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CVS42_RS16590 e471866e278156a93bd30793af3208e4 352 SUPERFAMILY SSF52172 1 109 1.11E-28 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS16590 e471866e278156a93bd30793af3208e4 352 Gene3D G3DSA:3.40.50.2300 3 142 2.2E-30 T 29-03-2018 CVS42_RS16590 e471866e278156a93bd30793af3208e4 352 Pfam PF00072 Response regulator receiver domain 6 109 1.4E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS02510 0c00d9a217a0afa828227a04f9b30927 692 SUPERFAMILY SSF69279 198 359 1.07E-42 T 29-03-2018 CVS42_RS02510 0c00d9a217a0afa828227a04f9b30927 692 SUPERFAMILY SSF69255 367 454 2.12E-33 T 29-03-2018 CVS42_RS02510 0c00d9a217a0afa828227a04f9b30927 692 Gene3D G3DSA:3.55.50.10 98 189 6.2E-28 T 29-03-2018 CVS42_RS02510 0c00d9a217a0afa828227a04f9b30927 692 Pfam PF05954 Phage late control gene D protein (GPD) 30 327 3.2E-88 T 29-03-2018 CVS42_RS02510 0c00d9a217a0afa828227a04f9b30927 692 SUPERFAMILY SSF69279 14 185 3.87E-56 T 29-03-2018 CVS42_RS02510 0c00d9a217a0afa828227a04f9b30927 692 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 506 1.5E-147 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CVS42_RS02510 0c00d9a217a0afa828227a04f9b30927 692 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 9 524 1.9E-205 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CVS42_RS02510 0c00d9a217a0afa828227a04f9b30927 692 SUPERFAMILY SSF69349 445 638 1.73E-45 T 29-03-2018 CVS42_RS02510 0c00d9a217a0afa828227a04f9b30927 692 Gene3D G3DSA:2.40.50.230 373 455 3.3E-36 T 29-03-2018 IPR006531 Gp5 N-terminal CVS42_RS07470 8a9eda5cddac1d371d5bc3c735d31da2 249 Pfam PF13344 Haloacid dehalogenase-like hydrolase 5 104 2.8E-22 T 29-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CVS42_RS07470 8a9eda5cddac1d371d5bc3c735d31da2 249 Pfam PF13242 HAD-hyrolase-like 173 245 9.6E-20 T 29-03-2018 CVS42_RS07470 8a9eda5cddac1d371d5bc3c735d31da2 249 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 5 222 1.6E-56 T 29-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CVS42_RS07470 8a9eda5cddac1d371d5bc3c735d31da2 249 Gene3D G3DSA:3.40.50.1000 2 247 7.8E-28 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS07470 8a9eda5cddac1d371d5bc3c735d31da2 249 SUPERFAMILY SSF56784 1 246 1.57E-60 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS03420 ce21b082e0927dc3a283fe40152c7db2 344 Pfam PF03734 L,D-transpeptidase catalytic domain 137 268 5.5E-16 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CVS42_RS03420 ce21b082e0927dc3a283fe40152c7db2 344 Gene3D G3DSA:3.10.350.10 78 126 1.7E-5 T 29-03-2018 CVS42_RS03420 ce21b082e0927dc3a283fe40152c7db2 344 SUPERFAMILY SSF141523 131 186 1.96E-26 T 29-03-2018 CVS42_RS03420 ce21b082e0927dc3a283fe40152c7db2 344 SUPERFAMILY SSF141523 214 270 1.96E-26 T 29-03-2018 CVS42_RS03420 ce21b082e0927dc3a283fe40152c7db2 344 Gene3D G3DSA:2.40.440.10 131 271 3.3E-28 T 29-03-2018 CVS42_RS18590 dc50af067c107bb9e2b3af210ce850b8 296 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 31 287 2.6E-116 T 29-03-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 CVS42_RS18590 dc50af067c107bb9e2b3af210ce850b8 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 286 2.6E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS18590 dc50af067c107bb9e2b3af210ce850b8 296 Gene3D G3DSA:1.10.3720.10 31 294 1.7E-41 T 29-03-2018 CVS42_RS18590 dc50af067c107bb9e2b3af210ce850b8 296 SUPERFAMILY SSF161098 29 280 4.58E-55 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS18590 dc50af067c107bb9e2b3af210ce850b8 296 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 28 285 2.2E-96 T 29-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CVS42_RS03005 80c4deef54a08e99bfbe5e2e42ba40c2 151 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 150 3.6E-28 T 29-03-2018 IPR002810 NfeD-like, C-terminal domain CVS42_RS03005 80c4deef54a08e99bfbe5e2e42ba40c2 151 SUPERFAMILY SSF141322 107 149 4.71E-5 T 29-03-2018 CVS42_RS03005 80c4deef54a08e99bfbe5e2e42ba40c2 151 Gene3D G3DSA:2.40.50.140 82 151 1.7E-15 T 29-03-2018 CVS42_RS06785 cf6ea7bc6b16deee9379275eec4ff785 338 Gene3D G3DSA:1.10.3470.10 2 335 1.0E-49 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CVS42_RS06785 cf6ea7bc6b16deee9379275eec4ff785 338 SUPERFAMILY SSF81345 7 328 1.7E-66 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CVS42_RS06785 cf6ea7bc6b16deee9379275eec4ff785 338 Pfam PF01032 FecCD transport family 15 328 7.9E-82 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CVS42_RS06345 f06222e0f64b6309b16dfd54f1c526e9 394 SMART SM00897 33 227 4.7E-29 T 29-03-2018 IPR013702 FIST domain, N-terminal CVS42_RS06345 f06222e0f64b6309b16dfd54f1c526e9 394 Pfam PF10442 FIST C domain 228 373 2.0E-14 T 29-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CVS42_RS06345 f06222e0f64b6309b16dfd54f1c526e9 394 Pfam PF08495 FIST N domain 36 226 1.4E-25 T 29-03-2018 IPR013702 FIST domain, N-terminal CVS42_RS06345 f06222e0f64b6309b16dfd54f1c526e9 394 SMART SM01204 228 374 2.4E-22 T 29-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CVS42_RS09855 81644202e5c67fc2ae6a0d0058217d87 41 SUPERFAMILY SSF57840 8 39 9.29E-12 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS09855 81644202e5c67fc2ae6a0d0058217d87 41 Pfam PF00444 Ribosomal protein L36 1 39 4.0E-13 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS09855 81644202e5c67fc2ae6a0d0058217d87 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 15.072 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS10020 0d41a57d8355e3e8a1a2b420ea1d06e0 481 Gene3D G3DSA:1.10.4100.10 1 329 8.0E-102 T 29-03-2018 CVS42_RS10020 0d41a57d8355e3e8a1a2b420ea1d06e0 481 Pfam PF03972 MmgE/PrpD family 19 461 2.8E-155 T 29-03-2018 IPR005656 MmgE/PrpD GO:0016829 CVS42_RS10020 0d41a57d8355e3e8a1a2b420ea1d06e0 481 SUPERFAMILY SSF103378 13 480 2.88E-157 T 29-03-2018 IPR005656 MmgE/PrpD GO:0016829 CVS42_RS10020 0d41a57d8355e3e8a1a2b420ea1d06e0 481 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 14 481 4.4E-264 T 29-03-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 CVS42_RS10020 0d41a57d8355e3e8a1a2b420ea1d06e0 481 Gene3D G3DSA:1.10.4100.10 390 481 3.2E-13 T 29-03-2018 CVS42_RS03650 b50e1ef26578b22bd25d48e753bd02b9 273 Gene3D G3DSA:1.10.287.70 30 234 5.8E-26 T 29-03-2018 CVS42_RS03650 b50e1ef26578b22bd25d48e753bd02b9 273 Pfam PF07885 Ion channel 155 232 2.2E-16 T 29-03-2018 IPR013099 Potassium channel domain CVS42_RS03650 b50e1ef26578b22bd25d48e753bd02b9 273 SUPERFAMILY SSF81324 32 236 2.49E-36 T 29-03-2018 CVS42_RS03650 b50e1ef26578b22bd25d48e753bd02b9 273 PRINTS PR00169 Potassium channel signature 206 232 4.0E-7 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CVS42_RS03650 b50e1ef26578b22bd25d48e753bd02b9 273 PRINTS PR00169 Potassium channel signature 118 144 4.0E-7 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CVS42_RS03650 b50e1ef26578b22bd25d48e753bd02b9 273 PRINTS PR00169 Potassium channel signature 177 199 4.0E-7 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CVS42_RS13125 4e6bfba6aa6c1460b20e451afce7def2 469 Pfam PF07196 Flagellin hook IN motif 131 184 1.2E-10 T 29-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 CVS42_RS13125 4e6bfba6aa6c1460b20e451afce7def2 469 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 110 8.3E-13 T 29-03-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 CVS42_RS13125 4e6bfba6aa6c1460b20e451afce7def2 469 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 216 456 9.5E-43 T 29-03-2018 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 CVS42_RS12840 837810135f7efe4193bbd43c2fa7d4ee 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 459 8.0E-90 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CVS42_RS12840 837810135f7efe4193bbd43c2fa7d4ee 539 PIRSF PIRSF002741 1 539 1.1E-120 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CVS42_RS12840 837810135f7efe4193bbd43c2fa7d4ee 539 SUPERFAMILY SSF53850 38 535 3.97E-152 T 29-03-2018 CVS42_RS12840 837810135f7efe4193bbd43c2fa7d4ee 539 Gene3D G3DSA:3.90.76.10 47 207 1.6E-45 T 29-03-2018 CVS42_RS12840 837810135f7efe4193bbd43c2fa7d4ee 539 Gene3D G3DSA:3.40.190.10 208 304 1.6E-23 T 29-03-2018 CVS42_RS12840 837810135f7efe4193bbd43c2fa7d4ee 539 Gene3D G3DSA:3.10.105.10 305 509 1.9E-60 T 29-03-2018 CVS42_RS06585 76410fb4247d21854916761e6536922d 198 Gene3D G3DSA:3.40.50.1240 1 188 1.4E-39 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CVS42_RS06585 76410fb4247d21854916761e6536922d 198 PIRSF PIRSF000709 1 192 2.1E-8 T 29-03-2018 CVS42_RS06585 76410fb4247d21854916761e6536922d 198 SUPERFAMILY SSF53254 2 186 5.24E-43 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CVS42_RS06585 76410fb4247d21854916761e6536922d 198 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 29-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CVS42_RS06585 76410fb4247d21854916761e6536922d 198 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 182 1.7E-35 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CVS42_RS06585 76410fb4247d21854916761e6536922d 198 SMART SM00855 4 160 2.3E-21 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CVS42_RS06725 c9eb73ff18920541de12e579420b7a3f 302 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 10 293 3.4E-94 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CVS42_RS06725 c9eb73ff18920541de12e579420b7a3f 302 Gene3D G3DSA:3.30.54.10 181 238 7.7E-20 T 29-03-2018 CVS42_RS06725 c9eb73ff18920541de12e579420b7a3f 302 SUPERFAMILY SSF56596 11 294 2.75E-62 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CVS42_RS06725 c9eb73ff18920541de12e579420b7a3f 302 Gene3D G3DSA:3.50.14.10 7 180 3.0E-49 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CVS42_RS19215 82393ad13e7d7869039cdb9467b9a856 187 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 31 170 3.6E-44 T 29-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CVS42_RS19215 82393ad13e7d7869039cdb9467b9a856 187 Gene3D G3DSA:2.60.450.10 31 168 1.9E-20 T 29-03-2018 CVS42_RS19215 82393ad13e7d7869039cdb9467b9a856 187 Pfam PF03968 OstA-like protein 41 151 6.0E-26 T 29-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal CVS42_RS19215 82393ad13e7d7869039cdb9467b9a856 187 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 13 171 20.616 T 29-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CVS42_RS15085 56b3df33479c9cefbf61543fd02c3347 394 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 390 6.4E-97 T 29-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 CVS42_RS15085 56b3df33479c9cefbf61543fd02c3347 394 SUPERFAMILY SSF53067 147 231 1.94E-22 T 29-03-2018 CVS42_RS15085 56b3df33479c9cefbf61543fd02c3347 394 Pfam PF12693 GspL periplasmic domain 238 390 2.3E-42 T 29-03-2018 IPR025691 GspL periplasmic domain CVS42_RS15085 56b3df33479c9cefbf61543fd02c3347 394 PIRSF PIRSF015761 18 393 3.5E-44 T 29-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 CVS42_RS15085 56b3df33479c9cefbf61543fd02c3347 394 Pfam PF05134 Type II secretion system (T2SS), protein L 5 232 2.8E-62 T 29-03-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain CVS42_RS15085 56b3df33479c9cefbf61543fd02c3347 394 SUPERFAMILY SSF53067 2 143 2.85E-41 T 29-03-2018 CVS42_RS13490 d8205bea15c919c91f4d5cd0bc1c0cf0 339 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 19 249 2.6E-64 T 29-03-2018 IPR018642 Protein of unknown function DUF2066 CVS42_RS16085 125c45deea28eb2f4d7376337bdd6712 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 127 3.0E-44 T 29-03-2018 IPR020911 Uncharacterised protein family UPF0325 CVS42_RS16085 125c45deea28eb2f4d7376337bdd6712 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 31.524 T 29-03-2018 IPR020911 Uncharacterised protein family UPF0325 CVS42_RS16085 125c45deea28eb2f4d7376337bdd6712 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 127 4.3E-58 T 29-03-2018 IPR020911 Uncharacterised protein family UPF0325 CVS42_RS15175 f81260ff016be6f191c82cd2c0497945 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 2.7E-63 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS15175 f81260ff016be6f191c82cd2c0497945 172 SUPERFAMILY SSF141452 3 168 2.88E-38 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS15175 f81260ff016be6f191c82cd2c0497945 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 7.1E-31 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS15175 f81260ff016be6f191c82cd2c0497945 172 Gene3D G3DSA:2.30.110.20 2 172 1.5E-49 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS10475 3dd7b28634edecee71a4dea65baf324a 569 Pfam PF02065 Melibiase 235 351 5.9E-14 T 29-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 CVS42_RS10475 3dd7b28634edecee71a4dea65baf324a 569 Gene3D G3DSA:3.20.20.70 189 495 1.5E-45 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS10475 3dd7b28634edecee71a4dea65baf324a 569 Gene3D G3DSA:2.60.40.1180 517 567 3.5E-4 T 29-03-2018 CVS42_RS10475 3dd7b28634edecee71a4dea65baf324a 569 SUPERFAMILY SSF51445 194 511 3.71E-75 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS04585 256a71db9a2dd2f1df8a8b2ade07e442 164 Pfam PF05618 Putative ATP-dependant zinc protease 26 159 1.6E-32 T 29-03-2018 CVS42_RS04585 256a71db9a2dd2f1df8a8b2ade07e442 164 Gene3D G3DSA:2.40.70.10 23 151 1.1E-33 T 29-03-2018 IPR021109 Aspartic peptidase domain CVS42_RS04585 256a71db9a2dd2f1df8a8b2ade07e442 164 SUPERFAMILY SSF50630 26 158 1.07E-35 T 29-03-2018 IPR021109 Aspartic peptidase domain CVS42_RS20495 43183026fae60f1f7261869815f51a95 199 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 189 3.6E-29 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CVS42_RS20495 43183026fae60f1f7261869815f51a95 199 Pfam PF01914 MarC family integral membrane protein 4 191 4.4E-55 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CVS42_RS00155 7612355822b7b9b6fa6d0b4f747e6344 655 SMART SM00091 249 317 0.001 T 29-03-2018 IPR000014 PAS domain CVS42_RS00155 7612355822b7b9b6fa6d0b4f747e6344 655 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 545 652 2.2E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00155 7612355822b7b9b6fa6d0b4f747e6344 655 SMART SM00304 177 236 0.0058 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS00155 7612355822b7b9b6fa6d0b4f747e6344 655 SUPERFAMILY SSF55874 503 652 8.12E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00155 7612355822b7b9b6fa6d0b4f747e6344 655 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 44 149 7.1E-18 T 29-03-2018 IPR033414 Periplasmic sensor domain CVS42_RS00155 7612355822b7b9b6fa6d0b4f747e6344 655 Gene3D G3DSA:1.10.287.130 398 494 1.5E-7 T 29-03-2018 CVS42_RS00155 7612355822b7b9b6fa6d0b4f747e6344 655 Gene3D G3DSA:3.30.450.20 234 379 1.8E-20 T 29-03-2018 CVS42_RS00155 7612355822b7b9b6fa6d0b4f747e6344 655 SMART SM00387 541 654 2.3E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00155 7612355822b7b9b6fa6d0b4f747e6344 655 SUPERFAMILY SSF55785 237 359 5.8E-16 T 29-03-2018 IPR000014 PAS domain CVS42_RS00155 7612355822b7b9b6fa6d0b4f747e6344 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 631 1.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS00155 7612355822b7b9b6fa6d0b4f747e6344 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 596 1.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS00155 7612355822b7b9b6fa6d0b4f747e6344 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 610 1.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS00155 7612355822b7b9b6fa6d0b4f747e6344 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 651 1.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS00155 7612355822b7b9b6fa6d0b4f747e6344 655 Gene3D G3DSA:3.30.565.10 502 655 2.9E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS00155 7612355822b7b9b6fa6d0b4f747e6344 655 Pfam PF13426 PAS domain 263 360 3.8E-7 T 29-03-2018 IPR000014 PAS domain CVS42_RS00155 7612355822b7b9b6fa6d0b4f747e6344 655 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 253 367 1.7E-8 T 29-03-2018 IPR000014 PAS domain CVS42_RS00155 7612355822b7b9b6fa6d0b4f747e6344 655 SUPERFAMILY SSF47384 410 450 8.24E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS17880 8c402a2a426cb5f81b34567f61b4354f 596 SUPERFAMILY SSF56801 5 283 2.09E-105 T 29-03-2018 CVS42_RS17880 8c402a2a426cb5f81b34567f61b4354f 596 SUPERFAMILY SSF56801 334 594 2.09E-105 T 29-03-2018 CVS42_RS17880 8c402a2a426cb5f81b34567f61b4354f 596 ProSitePatterns PS00455 Putative AMP-binding domain signature. 181 192 - T 29-03-2018 IPR020845 AMP-binding, conserved site CVS42_RS17880 8c402a2a426cb5f81b34567f61b4354f 596 Pfam PF00501 AMP-binding enzyme 12 464 8.1E-90 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CVS42_RS17880 8c402a2a426cb5f81b34567f61b4354f 596 Gene3D G3DSA:3.40.50.980 186 383 1.4E-40 T 29-03-2018 CVS42_RS17880 8c402a2a426cb5f81b34567f61b4354f 596 Gene3D G3DSA:3.30.300.30 459 595 1.4E-13 T 29-03-2018 CVS42_RS17880 8c402a2a426cb5f81b34567f61b4354f 596 Gene3D G3DSA:2.30.38.10 384 457 3.5E-17 T 29-03-2018 CVS42_RS17880 8c402a2a426cb5f81b34567f61b4354f 596 Gene3D G3DSA:3.40.50.980 4 185 1.3E-35 T 29-03-2018 CVS42_RS04725 a6ee295f88d290ad28ebe1bf4db7803b 286 Gene3D G3DSA:3.60.15.10 19 256 8.1E-17 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS04725 a6ee295f88d290ad28ebe1bf4db7803b 286 SUPERFAMILY SSF56281 24 245 1.41E-33 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS04725 a6ee295f88d290ad28ebe1bf4db7803b 286 SMART SM00849 39 221 8.9E-12 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS17045 908492664d3312087b136c7c2889cc3c 222 Pfam PF04225 Opacity-associated protein A LysM-like domain 139 217 2.9E-11 T 29-03-2018 IPR007340 Opacity-associated protein A CVS42_RS20580 660b76fb9ce094ffa618fa9b4b772b1e 193 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 18 156 4.2E-40 T 29-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CVS42_RS20580 660b76fb9ce094ffa618fa9b4b772b1e 193 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 17 157 3.3E-43 T 29-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CVS42_RS20580 660b76fb9ce094ffa618fa9b4b772b1e 193 SUPERFAMILY SSF56784 15 185 3.64E-50 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS20580 660b76fb9ce094ffa618fa9b4b772b1e 193 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 16 185 6.5E-77 T 29-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CVS42_RS20580 660b76fb9ce094ffa618fa9b4b772b1e 193 Gene3D G3DSA:3.40.50.1000 18 191 6.2E-32 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS20580 660b76fb9ce094ffa618fa9b4b772b1e 193 PIRSF PIRSF004682 10 193 2.0E-66 T 29-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CVS42_RS20580 660b76fb9ce094ffa618fa9b4b772b1e 193 Pfam PF13242 HAD-hyrolase-like 115 172 8.5E-12 T 29-03-2018 CVS42_RS15750 715756a67265f16b1ba6dd1e6e360d71 646 SUPERFAMILY SSF116726 578 641 6.67E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS15750 715756a67265f16b1ba6dd1e6e360d71 646 Gene3D G3DSA:3.40.50.720 390 515 5.9E-18 T 29-03-2018 CVS42_RS15750 715756a67265f16b1ba6dd1e6e360d71 646 Pfam PF02080 TrkA-C domain 585 641 1.2E-7 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS15750 715756a67265f16b1ba6dd1e6e360d71 646 Gene3D G3DSA:1.20.91.10 224 305 1.8E-12 T 29-03-2018 CVS42_RS15750 715756a67265f16b1ba6dd1e6e360d71 646 Pfam PF02254 TrkA-N domain 401 514 5.6E-20 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CVS42_RS15750 715756a67265f16b1ba6dd1e6e360d71 646 SUPERFAMILY SSF51735 398 536 7.89E-30 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS15750 715756a67265f16b1ba6dd1e6e360d71 646 Pfam PF00999 Sodium/hydrogen exchanger family 3 368 1.0E-68 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CVS42_RS15750 715756a67265f16b1ba6dd1e6e360d71 646 Gene3D G3DSA:3.30.70.1450 576 645 1.5E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS03945 05e9a90ec1c4249f1dbd1f1fc9ac62a0 98 SUPERFAMILY SSF141488 23 97 4.45E-17 T 29-03-2018 IPR018660 C-type lysozyme inhibitor CVS42_RS03945 05e9a90ec1c4249f1dbd1f1fc9ac62a0 98 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 29 91 1.1E-11 T 29-03-2018 IPR018660 C-type lysozyme inhibitor CVS42_RS05780 4876d1e871aea687d92453a695a8c0ca 308 SUPERFAMILY SSF101801 232 306 7.59E-17 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CVS42_RS05780 4876d1e871aea687d92453a695a8c0ca 308 Gene3D G3DSA:2.30.330.10 147 219 3.6E-12 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CVS42_RS05780 4876d1e871aea687d92453a695a8c0ca 308 Gene3D G3DSA:2.30.330.10 220 308 4.3E-18 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CVS42_RS05780 4876d1e871aea687d92453a695a8c0ca 308 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 233 301 2.2E-14 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CVS42_RS05780 4876d1e871aea687d92453a695a8c0ca 308 SUPERFAMILY SSF101801 151 212 2.62E-5 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CVS42_RS05780 4876d1e871aea687d92453a695a8c0ca 308 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 235 247 5.7E-10 T 29-03-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 CVS42_RS05780 4876d1e871aea687d92453a695a8c0ca 308 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 175 185 5.7E-10 T 29-03-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 CVS42_RS05780 4876d1e871aea687d92453a695a8c0ca 308 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 279 296 5.7E-10 T 29-03-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 CVS42_RS05780 4876d1e871aea687d92453a695a8c0ca 308 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 41 302 4.4E-57 T 29-03-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 CVS42_RS09190 c1abbb4bcee3e31f2c22e04c9e442dff 258 SUPERFAMILY SSF53335 4 256 2.74E-35 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS09190 c1abbb4bcee3e31f2c22e04c9e442dff 258 Pfam PF13847 Methyltransferase domain 46 148 2.0E-14 T 29-03-2018 IPR025714 Methyltransferase domain CVS42_RS09190 c1abbb4bcee3e31f2c22e04c9e442dff 258 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 256 41.522 T 29-03-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 CVS42_RS09190 c1abbb4bcee3e31f2c22e04c9e442dff 258 Gene3D G3DSA:3.40.50.150 10 258 6.2E-47 T 29-03-2018 CVS42_RS21915 75393ba69b46f42a722608f00c865a56 496 SUPERFAMILY SSF53067 131 301 9.46E-42 T 29-03-2018 CVS42_RS21915 75393ba69b46f42a722608f00c865a56 496 Gene3D G3DSA:3.30.420.150 128 306 3.9E-34 T 29-03-2018 CVS42_RS21915 75393ba69b46f42a722608f00c865a56 496 Pfam PF02541 Ppx/GppA phosphatase family 20 300 9.4E-83 T 29-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CVS42_RS21915 75393ba69b46f42a722608f00c865a56 496 PIRSF PIRSF001267 1 496 3.7E-174 T 29-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CVS42_RS21915 75393ba69b46f42a722608f00c865a56 496 Gene3D G3DSA:3.30.420.40 1 127 2.0E-36 T 29-03-2018 CVS42_RS21915 75393ba69b46f42a722608f00c865a56 496 Gene3D G3DSA:1.10.3210.10 307 443 0.0014 T 29-03-2018 CVS42_RS21915 75393ba69b46f42a722608f00c865a56 496 SUPERFAMILY SSF109604 306 493 2.26E-47 T 29-03-2018 CVS42_RS21915 75393ba69b46f42a722608f00c865a56 496 SUPERFAMILY SSF53067 6 124 1.29E-33 T 29-03-2018 CVS42_RS21915 75393ba69b46f42a722608f00c865a56 496 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 494 58.783 T 29-03-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 CVS42_RS16095 c3d46aaaaef6682be4040a100d57dc32 332 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 85 220 2.1E-36 T 29-03-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 CVS42_RS17100 72e19a542caad90e1b1889c1cdd27597 325 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 87 319 1.4E-76 T 29-03-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CVS42_RS17100 72e19a542caad90e1b1889c1cdd27597 325 Pfam PF02666 Phosphatidylserine decarboxylase 100 319 2.2E-58 T 29-03-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CVS42_RS17100 72e19a542caad90e1b1889c1cdd27597 325 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 47 322 44.927 T 29-03-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 CVS42_RS18980 a989c3e0e98a0ac4e144dcd6652caa59 147 Pfam PF05130 FlgN protein 8 133 1.5E-21 T 29-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CVS42_RS18980 a989c3e0e98a0ac4e144dcd6652caa59 147 SUPERFAMILY SSF140566 8 133 6.02E-28 T 29-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CVS42_RS18980 a989c3e0e98a0ac4e144dcd6652caa59 147 Gene3D G3DSA:1.20.58.300 7 135 4.0E-25 T 29-03-2018 CVS42_RS07245 372b2b7fd46d908c46e349963abcda20 460 Pfam PF00324 Amino acid permease 18 441 5.5E-115 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CVS42_RS07245 372b2b7fd46d908c46e349963abcda20 460 PIRSF PIRSF006060 1 454 1.1E-72 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS07245 372b2b7fd46d908c46e349963abcda20 460 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CVS42_RS09460 4cbc408079b53b330005bef506668dcd 214 Pfam PF00753 Metallo-beta-lactamase superfamily 11 193 9.6E-29 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS09460 4cbc408079b53b330005bef506668dcd 214 Gene3D G3DSA:3.60.15.10 1 211 1.1E-43 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS09460 4cbc408079b53b330005bef506668dcd 214 SUPERFAMILY SSF56281 3 209 6.29E-58 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS09460 4cbc408079b53b330005bef506668dcd 214 SMART SM00849 13 193 5.8E-37 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS12110 28b62f9adf40fd266dca0686bfd9f949 180 SUPERFAMILY SSF52833 29 179 2.8E-47 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS12110 28b62f9adf40fd266dca0686bfd9f949 180 PIRSF PIRSF000216 9 180 5.2E-50 T 29-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12110 28b62f9adf40fd266dca0686bfd9f949 180 Gene3D G3DSA:3.40.30.10 98 179 8.6E-10 T 29-03-2018 CVS42_RS12110 28b62f9adf40fd266dca0686bfd9f949 180 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 36 179 8.3E-47 T 29-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12110 28b62f9adf40fd266dca0686bfd9f949 180 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 137 155 - T 29-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12110 28b62f9adf40fd266dca0686bfd9f949 180 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 38 179 5.2E-48 T 29-03-2018 CVS42_RS12015 1141f77adb31fa5d427b04186ea9e2d8 245 SUPERFAMILY SSF55166 10 243 3.3E-82 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CVS42_RS12015 1141f77adb31fa5d427b04186ea9e2d8 245 Pfam PF03411 Penicillin-insensitive murein endopeptidase 15 243 4.3E-86 T 29-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CVS42_RS12015 1141f77adb31fa5d427b04186ea9e2d8 245 Gene3D G3DSA:3.30.1380.10 4 245 6.5E-79 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CVS42_RS12015 1141f77adb31fa5d427b04186ea9e2d8 245 PIRSF PIRSF018455 4 244 2.3E-87 T 29-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CVS42_RS01265 1c815fbe1bc3a0892de924ce1c9c76d1 299 Pfam PF03466 LysR substrate binding domain 102 288 2.3E-20 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS01265 1c815fbe1bc3a0892de924ce1c9c76d1 299 SUPERFAMILY SSF46785 6 92 1.39E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS01265 1c815fbe1bc3a0892de924ce1c9c76d1 299 SUPERFAMILY SSF53850 99 295 2.71E-23 T 29-03-2018 CVS42_RS01265 1c815fbe1bc3a0892de924ce1c9c76d1 299 Gene3D G3DSA:3.40.190.10 99 186 1.0E-8 T 29-03-2018 CVS42_RS01265 1c815fbe1bc3a0892de924ce1c9c76d1 299 Gene3D G3DSA:3.40.190.10 187 271 8.9E-10 T 29-03-2018 CVS42_RS01265 1c815fbe1bc3a0892de924ce1c9c76d1 299 Gene3D G3DSA:1.10.10.10 6 93 9.0E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS01265 1c815fbe1bc3a0892de924ce1c9c76d1 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 3.0E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS01125 35c06f8dbb7462a78ef798609b8e253e 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 3.3E-56 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CVS42_RS01125 35c06f8dbb7462a78ef798609b8e253e 122 SUPERFAMILY SSF50193 1 122 1.2E-52 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CVS42_RS01125 35c06f8dbb7462a78ef798609b8e253e 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 29-03-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01125 35c06f8dbb7462a78ef798609b8e253e 122 Gene3D G3DSA:2.40.150.20 1 122 3.4E-54 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CVS42_RS01125 35c06f8dbb7462a78ef798609b8e253e 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 28.164 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CVS42_RS01125 35c06f8dbb7462a78ef798609b8e253e 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 4.3E-59 T 29-03-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CVS42_RS01125 35c06f8dbb7462a78ef798609b8e253e 122 SMART SM01374 1 122 3.7E-87 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CVS42_RS02490 cb7b12b6c7d36d4af3f5b93532a06a52 475 Pfam PF06812 ImpA, N-terminal, type VI secretion system 13 111 5.6E-15 T 29-03-2018 IPR010657 ImpA, N-terminal CVS42_RS02490 cb7b12b6c7d36d4af3f5b93532a06a52 475 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 226 467 8.5E-78 T 29-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 CVS42_RS02490 cb7b12b6c7d36d4af3f5b93532a06a52 475 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 7 470 1.6E-155 T 29-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 CVS42_RS01005 c88e82d4173782ab870157fad253bc4e 156 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 9 143 1.3E-61 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CVS42_RS01005 c88e82d4173782ab870157fad253bc4e 156 Pfam PF02556 Preprotein translocase subunit SecB 8 146 9.0E-59 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CVS42_RS01005 c88e82d4173782ab870157fad253bc4e 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 16 33 1.3E-40 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CVS42_RS01005 c88e82d4173782ab870157fad253bc4e 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 76 96 1.3E-40 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CVS42_RS01005 c88e82d4173782ab870157fad253bc4e 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 126 144 1.3E-40 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CVS42_RS01005 c88e82d4173782ab870157fad253bc4e 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 100 122 1.3E-40 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CVS42_RS01005 c88e82d4173782ab870157fad253bc4e 156 Gene3D G3DSA:3.10.420.10 4 156 3.3E-55 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CVS42_RS01005 c88e82d4173782ab870157fad253bc4e 156 Hamap MF_00821 Protein-export protein SecB [secB]. 1 148 34.009 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CVS42_RS01005 c88e82d4173782ab870157fad253bc4e 156 SUPERFAMILY SSF54611 4 144 6.54E-56 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CVS42_RS03900 4bbbba296effc567c1ddca61fedf8a12 363 Pfam PF00294 pfkB family carbohydrate kinase 59 346 1.7E-46 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CVS42_RS03900 4bbbba296effc567c1ddca61fedf8a12 363 Gene3D G3DSA:3.40.1190.20 64 362 1.3E-53 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS03900 4bbbba296effc567c1ddca61fedf8a12 363 SUPERFAMILY SSF53613 60 358 1.37E-58 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS03900 4bbbba296effc567c1ddca61fedf8a12 363 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 48 1.4E-11 T 29-03-2018 CVS42_RS03900 4bbbba296effc567c1ddca61fedf8a12 363 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 302 315 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CVS42_RS03900 4bbbba296effc567c1ddca61fedf8a12 363 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 93 117 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CVS42_RS03900 4bbbba296effc567c1ddca61fedf8a12 363 Gene3D G3DSA:1.10.10.10 1 63 1.1E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS03900 4bbbba296effc567c1ddca61fedf8a12 363 SUPERFAMILY SSF46785 1 55 2.95E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS11960 c6af222737ad889e19cc10c0cb393b1a 145 Pfam PF08448 PAS fold 16 135 7.4E-6 T 29-03-2018 IPR013656 PAS fold-4 CVS42_RS11960 c6af222737ad889e19cc10c0cb393b1a 145 Gene3D G3DSA:3.30.450.20 4 136 2.5E-11 T 29-03-2018 CVS42_RS11960 c6af222737ad889e19cc10c0cb393b1a 145 SMART SM00091 9 75 0.0022 T 29-03-2018 IPR000014 PAS domain CVS42_RS11960 c6af222737ad889e19cc10c0cb393b1a 145 SUPERFAMILY SSF55785 10 127 1.87E-9 T 29-03-2018 IPR000014 PAS domain CVS42_RS00350 19cb2a86ee4039d16c9d5e39bed3ddd8 374 SUPERFAMILY SSF51246 301 369 5.49E-17 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CVS42_RS00350 19cb2a86ee4039d16c9d5e39bed3ddd8 374 Gene3D G3DSA:3.40.50.20 6 91 1.1E-22 T 29-03-2018 CVS42_RS00350 19cb2a86ee4039d16c9d5e39bed3ddd8 374 Pfam PF02222 ATP-grasp domain 113 276 3.4E-40 T 29-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CVS42_RS00350 19cb2a86ee4039d16c9d5e39bed3ddd8 374 SUPERFAMILY SSF52440 7 101 1.58E-25 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CVS42_RS00350 19cb2a86ee4039d16c9d5e39bed3ddd8 374 Gene3D G3DSA:3.30.1490.20 96 179 4.4E-12 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CVS42_RS00350 19cb2a86ee4039d16c9d5e39bed3ddd8 374 SUPERFAMILY SSF56059 103 296 7.44E-49 T 29-03-2018 CVS42_RS00350 19cb2a86ee4039d16c9d5e39bed3ddd8 374 Gene3D G3DSA:3.30.470.20 180 370 8.2E-34 T 29-03-2018 CVS42_RS00350 19cb2a86ee4039d16c9d5e39bed3ddd8 374 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 7 355 38.796 T 29-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CVS42_RS00350 19cb2a86ee4039d16c9d5e39bed3ddd8 374 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 7 359 2.6E-106 T 29-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CVS42_RS18335 8071ae821f99d6e92b7e321da40ae5c1 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.708 T 29-03-2018 IPR005583 Peroxide stress protein YaaA CVS42_RS18335 8071ae821f99d6e92b7e321da40ae5c1 257 Pfam PF03883 Peroxide stress protein YaaA 1 243 2.9E-90 T 29-03-2018 IPR005583 Peroxide stress protein YaaA CVS42_RS17405 868a2516f3a5be4c1d62e79a60dfdf3d 166 Pfam PF03887 YfbU domain 1 166 8.7E-63 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CVS42_RS17405 868a2516f3a5be4c1d62e79a60dfdf3d 166 SUPERFAMILY SSF116960 1 166 9.29E-58 T 29-03-2018 CVS42_RS17405 868a2516f3a5be4c1d62e79a60dfdf3d 166 Gene3D G3DSA:1.10.3190.10 54 166 6.6E-30 T 29-03-2018 IPR023146 YfbU, alpha-helical bundle domain CVS42_RS17405 868a2516f3a5be4c1d62e79a60dfdf3d 166 Gene3D G3DSA:1.10.287.680 2 51 4.7E-21 T 29-03-2018 IPR023145 YfbU, helix-hairpin domain CVS42_RS17405 868a2516f3a5be4c1d62e79a60dfdf3d 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 2.0E-39 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CVS42_RS02340 9b2a2ccdef5f6affdb74b78860b30706 313 Gene3D G3DSA:3.40.190.10 150 308 3.1E-24 T 29-03-2018 CVS42_RS02340 9b2a2ccdef5f6affdb74b78860b30706 313 Pfam PF16868 NMT1-like family 23 306 1.5E-60 T 29-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family CVS42_RS02340 9b2a2ccdef5f6affdb74b78860b30706 313 SUPERFAMILY SSF53850 19 306 1.22E-50 T 29-03-2018 CVS42_RS02340 9b2a2ccdef5f6affdb74b78860b30706 313 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 17 307 7.7E-65 T 29-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family CVS42_RS02340 9b2a2ccdef5f6affdb74b78860b30706 313 Gene3D G3DSA:3.40.190.10 15 149 4.6E-15 T 29-03-2018 CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 SUPERFAMILY SSF51419 8 234 6.94E-69 T 29-03-2018 IPR029066 PLP-binding barrel CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 Gene3D G3DSA:3.20.20.10 10 201 5.8E-37 T 29-03-2018 IPR029066 PLP-binding barrel CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 SUPERFAMILY SSF50621 226 357 3.49E-46 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 Hamap MF_01201 Alanine racemase. 1 357 35.231 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 Gene3D G3DSA:2.40.37.10 202 357 2.1E-58 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 29-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 7.7E-66 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 SMART SM01005 233 357 9.2E-65 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 TIGRFAM TIGR00492 alr: alanine racemase 3 357 4.4E-125 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 PRINTS PR00992 Alanine racemase signature 155 166 2.9E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 PRINTS PR00992 Alanine racemase signature 120 132 2.9E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 PRINTS PR00992 Alanine racemase signature 249 264 2.9E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 PRINTS PR00992 Alanine racemase signature 60 78 2.9E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 PRINTS PR00992 Alanine racemase signature 287 304 2.9E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 PRINTS PR00992 Alanine racemase signature 192 219 2.9E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 PRINTS PR00992 Alanine racemase signature 266 281 2.9E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 PRINTS PR00992 Alanine racemase signature 339 352 2.9E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 PRINTS PR00992 Alanine racemase signature 26 42 2.9E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS04050 2e84347b4d0e3bf5d3fc301300b566ec 357 Pfam PF00842 Alanine racemase, C-terminal domain 233 354 1.3E-40 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CVS42_RS14945 4ed4eb71004ad755e55e7bbb5baa278e 408 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 283 383 2.2E-12 T 29-03-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CVS42_RS14945 4ed4eb71004ad755e55e7bbb5baa278e 408 Gene3D G3DSA:3.60.21.10 1 77 2.8E-16 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS14945 4ed4eb71004ad755e55e7bbb5baa278e 408 Gene3D G3DSA:3.60.21.10 78 282 1.6E-16 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS14945 4ed4eb71004ad755e55e7bbb5baa278e 408 Pfam PF00149 Calcineurin-like phosphoesterase 1 94 8.4E-13 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CVS42_RS14945 4ed4eb71004ad755e55e7bbb5baa278e 408 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 259 1.3E-57 T 29-03-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 CVS42_RS14945 4ed4eb71004ad755e55e7bbb5baa278e 408 SUPERFAMILY SSF56300 1 344 2.37E-47 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS03140 1395f0dcd6e59d4109b296ade94bb3f1 180 Gene3D G3DSA:3.90.1140.10 2 177 2.2E-28 T 29-03-2018 CVS42_RS03140 1395f0dcd6e59d4109b296ade94bb3f1 180 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 2 167 19.991 T 29-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CVS42_RS03140 1395f0dcd6e59d4109b296ade94bb3f1 180 Pfam PF02834 LigT like Phosphoesterase 9 78 2.1E-10 T 29-03-2018 IPR014051 Phosphoesterase, HXTX CVS42_RS03140 1395f0dcd6e59d4109b296ade94bb3f1 180 SUPERFAMILY SSF55144 3 168 3.14E-36 T 29-03-2018 IPR009097 Cyclic phosphodiesterase CVS42_RS03140 1395f0dcd6e59d4109b296ade94bb3f1 180 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 3 167 1.2E-28 T 29-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 SUPERFAMILY SSF52935 323 469 1.1E-33 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 Gene3D G3DSA:2.40.33.10 115 159 4.5E-25 T 29-03-2018 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 2.3E-25 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 Gene3D G3DSA:3.20.20.60 1 114 3.3E-19 T 29-03-2018 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 Gene3D G3DSA:3.20.20.60 160 321 1.3E-65 T 29-03-2018 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 29-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 SUPERFAMILY SSF51621 1 74 6.98E-101 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 SUPERFAMILY SSF51621 156 339 6.98E-101 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 6.2E-151 T 29-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 2.9E-186 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.3E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.3E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.3E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.3E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.3E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.3E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.3E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 Gene3D G3DSA:3.40.1380.20 322 470 7.4E-41 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CVS42_RS14965 735c172192906c4ed2d53ad56ee75189 470 SUPERFAMILY SSF50800 70 167 2.79E-29 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CVS42_RS04230 a06357174870826f4115beea8e26b47d 314 SUPERFAMILY SSF50341 16 161 2.75E-34 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS04230 a06357174870826f4115beea8e26b47d 314 Pfam PF01584 CheW-like domain 21 159 2.1E-35 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS04230 a06357174870826f4115beea8e26b47d 314 Pfam PF00072 Response regulator receiver domain 185 298 2.6E-14 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS04230 a06357174870826f4115beea8e26b47d 314 PIRSF PIRSF002867 1 312 2.1E-101 T 29-03-2018 IPR024181 Chemotaxis response regulator CheV CVS42_RS04230 a06357174870826f4115beea8e26b47d 314 Gene3D G3DSA:3.40.50.2300 170 314 4.8E-21 T 29-03-2018 CVS42_RS04230 a06357174870826f4115beea8e26b47d 314 SMART SM00260 17 157 5.0E-25 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS04230 a06357174870826f4115beea8e26b47d 314 SUPERFAMILY SSF52172 178 309 7.54E-23 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS04230 a06357174870826f4115beea8e26b47d 314 Gene3D G3DSA:2.40.50.180 39 102 5.1E-15 T 29-03-2018 CVS42_RS04230 a06357174870826f4115beea8e26b47d 314 Gene3D G3DSA:2.30.30.40 103 151 7.3E-10 T 29-03-2018 CVS42_RS04230 a06357174870826f4115beea8e26b47d 314 SMART SM00448 183 304 8.4E-14 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS11005 4d36f469ddfda869fc202e85fb2e1ebf 550 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 451 471 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CVS42_RS11005 4d36f469ddfda869fc202e85fb2e1ebf 550 Pfam PF00474 Sodium:solute symporter family 63 469 7.2E-124 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CVS42_RS11005 4d36f469ddfda869fc202e85fb2e1ebf 550 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 63 467 9.4E-61 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CVS42_RS11005 4d36f469ddfda869fc202e85fb2e1ebf 550 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 178 203 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CVS42_RS05820 21da43254529e102068c81f622b569d3 114 PIRSF PIRSF017117 1 110 8.8E-48 T 29-03-2018 IPR016684 Type III secretion system chaperone, YscY CVS42_RS05820 21da43254529e102068c81f622b569d3 114 Gene3D G3DSA:1.25.40.10 3 62 7.4E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS05820 21da43254529e102068c81f622b569d3 114 Gene3D G3DSA:1.25.40.10 63 113 4.0E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS05820 21da43254529e102068c81f622b569d3 114 Pfam PF13174 Tetratricopeptide repeat 9 41 0.0016 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS05820 21da43254529e102068c81f622b569d3 114 SUPERFAMILY SSF48452 7 109 2.14E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS06235 4bf0d3596e22480344972baf96441f59 383 Gene3D G3DSA:1.10.10.10 1 53 0.072 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS06235 4bf0d3596e22480344972baf96441f59 383 Pfam PF13936 Helix-turn-helix domain 58 98 8.2E-18 T 29-03-2018 IPR025246 Transposase IS30-like HTH domain CVS42_RS06235 4bf0d3596e22480344972baf96441f59 383 Gene3D G3DSA:3.30.420.10 223 381 1.3E-20 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS06235 4bf0d3596e22480344972baf96441f59 383 Pfam PF00665 Integrase core domain 230 335 2.1E-11 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CVS42_RS06235 4bf0d3596e22480344972baf96441f59 383 Gene3D G3DSA:1.10.10.60 57 100 2.8E-13 T 29-03-2018 CVS42_RS06235 4bf0d3596e22480344972baf96441f59 383 SUPERFAMILY SSF53098 229 375 2.09E-23 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS00835 8d089804e3ba3e03e9f1872cd145371f 151 Gene3D G3DSA:3.10.129.10 3 150 3.9E-32 T 29-03-2018 CVS42_RS00835 8d089804e3ba3e03e9f1872cd145371f 151 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 149 1.8E-18 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CVS42_RS00835 8d089804e3ba3e03e9f1872cd145371f 151 Pfam PF03061 Thioesterase superfamily 52 140 2.1E-16 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CVS42_RS00835 8d089804e3ba3e03e9f1872cd145371f 151 SUPERFAMILY SSF54637 9 150 3.11E-28 T 29-03-2018 IPR029069 HotDog domain CVS42_RS15965 e271cecc82bb72994a1efb67e21f1f62 671 SUPERFAMILY SSF54001 284 605 7.29E-55 T 29-03-2018 CVS42_RS15965 e271cecc82bb72994a1efb67e21f1f62 671 SMART SM00460 407 478 1.6E-20 T 29-03-2018 IPR002931 Transglutaminase-like CVS42_RS15965 e271cecc82bb72994a1efb67e21f1f62 671 Pfam PF01841 Transglutaminase-like superfamily 378 476 2.7E-20 T 29-03-2018 IPR002931 Transglutaminase-like CVS42_RS15965 e271cecc82bb72994a1efb67e21f1f62 671 Pfam PF13559 Domain of unknown function (DUF4129) 587 653 1.2E-5 T 29-03-2018 IPR025403 Domain of unknown function DUF4129 CVS42_RS15965 e271cecc82bb72994a1efb67e21f1f62 671 Pfam PF11992 Domain of unknown function (DUF3488) 13 331 1.1E-72 T 29-03-2018 IPR021878 Protein of unknown function DUF3488 CVS42_RS15965 e271cecc82bb72994a1efb67e21f1f62 671 Gene3D G3DSA:3.90.260.10 372 491 9.0E-16 T 29-03-2018 IPR002931 Transglutaminase-like CVS42_RS22155 2fb64ae270c5911cb54821a1dc0ece76 302 Gene3D G3DSA:3.90.1530.10 33 136 1.8E-36 T 29-03-2018 CVS42_RS22155 2fb64ae270c5911cb54821a1dc0ece76 302 Pfam PF02195 ParB-like nuclease domain 48 136 1.2E-26 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CVS42_RS22155 2fb64ae270c5911cb54821a1dc0ece76 302 SUPERFAMILY SSF110849 45 181 5.23E-36 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CVS42_RS22155 2fb64ae270c5911cb54821a1dc0ece76 302 Gene3D G3DSA:1.10.10.730 137 184 2.8E-18 T 29-03-2018 CVS42_RS22155 2fb64ae270c5911cb54821a1dc0ece76 302 SMART SM00470 46 136 6.4E-33 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CVS42_RS22155 2fb64ae270c5911cb54821a1dc0ece76 302 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 43 218 1.8E-56 T 29-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CVS42_RS21000 573852a40702d802720f8c19a5702368 146 Pfam PF10675 Protein of unknown function (DUF2489) 13 139 2.0E-46 T 29-03-2018 IPR019617 Domain of unknown function DUF2489 CVS42_RS18945 cb990a585c1ef8a17d94a512d672ea80 244 Pfam PF00460 Flagella basal body rod protein 5 35 4.7E-7 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CVS42_RS18945 cb990a585c1ef8a17d94a512d672ea80 244 SUPERFAMILY SSF117143 78 199 6.41E-18 T 29-03-2018 CVS42_RS18945 cb990a585c1ef8a17d94a512d672ea80 244 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 220 3.2E-57 T 29-03-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 CVS42_RS18945 cb990a585c1ef8a17d94a512d672ea80 244 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 168 236 1.3E-17 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CVS42_RS18945 cb990a585c1ef8a17d94a512d672ea80 244 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 3.6E-35 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CVS42_RS12540 f28ac612d23129e0f2587df078b1d66d 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 30 47 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CVS42_RS12540 f28ac612d23129e0f2587df078b1d66d 267 SUPERFAMILY SSF51430 3 262 1.57E-79 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CVS42_RS12540 f28ac612d23129e0f2587df078b1d66d 267 PRINTS PR00069 Aldo-keto reductase signature 115 132 5.7E-45 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CVS42_RS12540 f28ac612d23129e0f2587df078b1d66d 267 PRINTS PR00069 Aldo-keto reductase signature 187 211 5.7E-45 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CVS42_RS12540 f28ac612d23129e0f2587df078b1d66d 267 PRINTS PR00069 Aldo-keto reductase signature 26 50 5.7E-45 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CVS42_RS12540 f28ac612d23129e0f2587df078b1d66d 267 PRINTS PR00069 Aldo-keto reductase signature 82 100 5.7E-45 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CVS42_RS12540 f28ac612d23129e0f2587df078b1d66d 267 PRINTS PR00069 Aldo-keto reductase signature 150 179 5.7E-45 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CVS42_RS12540 f28ac612d23129e0f2587df078b1d66d 267 Pfam PF00248 Aldo/keto reductase family 6 251 6.1E-45 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CVS42_RS12540 f28ac612d23129e0f2587df078b1d66d 267 PIRSF PIRSF000097 1 265 1.4E-59 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CVS42_RS12540 f28ac612d23129e0f2587df078b1d66d 267 Gene3D G3DSA:3.20.20.100 1 263 7.9E-80 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CVS42_RS12540 f28ac612d23129e0f2587df078b1d66d 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 115 132 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CVS42_RS03880 6bacbac2792aee3a5333bf4d114f6986 424 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 53 61 6.7E-9 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CVS42_RS03880 6bacbac2792aee3a5333bf4d114f6986 424 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 83 94 6.7E-9 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CVS42_RS03880 6bacbac2792aee3a5333bf4d114f6986 424 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 141 155 6.7E-9 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CVS42_RS03880 6bacbac2792aee3a5333bf4d114f6986 424 SUPERFAMILY SSF53474 18 204 1.11E-26 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS03880 6bacbac2792aee3a5333bf4d114f6986 424 SUPERFAMILY SSF53474 273 418 1.64E-5 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS03880 6bacbac2792aee3a5333bf4d114f6986 424 Gene3D G3DSA:3.40.50.1820 7 420 9.0E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS03880 6bacbac2792aee3a5333bf4d114f6986 424 Pfam PF00561 alpha/beta hydrolase fold 51 276 4.4E-31 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS00220 14715ea5b7edfa4b9712aa53fbecfa55 425 SUPERFAMILY SSF46689 333 417 7.89E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS00220 14715ea5b7edfa4b9712aa53fbecfa55 425 Gene3D G3DSA:1.10.10.60 376 418 1.3E-14 T 29-03-2018 CVS42_RS00220 14715ea5b7edfa4b9712aa53fbecfa55 425 Gene3D G3DSA:1.10.8.60 293 375 4.1E-18 T 29-03-2018 CVS42_RS00220 14715ea5b7edfa4b9712aa53fbecfa55 425 SMART SM00448 9 120 2.5E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS00220 14715ea5b7edfa4b9712aa53fbecfa55 425 SUPERFAMILY SSF52540 144 349 1.77E-25 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00220 14715ea5b7edfa4b9712aa53fbecfa55 425 Pfam PF02954 Bacterial regulatory protein, Fis family 374 414 3.7E-10 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS00220 14715ea5b7edfa4b9712aa53fbecfa55 425 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 397 417 5.4E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS00220 14715ea5b7edfa4b9712aa53fbecfa55 425 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 380 397 5.4E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS00220 14715ea5b7edfa4b9712aa53fbecfa55 425 Gene3D G3DSA:3.40.50.2300 3 141 5.6E-32 T 29-03-2018 CVS42_RS00220 14715ea5b7edfa4b9712aa53fbecfa55 425 Pfam PF00072 Response regulator receiver domain 11 120 4.0E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS00220 14715ea5b7edfa4b9712aa53fbecfa55 425 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 333 342 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CVS42_RS00220 14715ea5b7edfa4b9712aa53fbecfa55 425 Gene3D G3DSA:3.40.50.300 142 292 1.0E-8 T 29-03-2018 CVS42_RS00220 14715ea5b7edfa4b9712aa53fbecfa55 425 SUPERFAMILY SSF52172 8 189 1.99E-39 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS00220 14715ea5b7edfa4b9712aa53fbecfa55 425 Pfam PF14532 Sigma-54 interaction domain 146 291 1.1E-16 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CVS42_RS15695 37c4dbc83cb3cb953ed07f010d60ea45 254 Gene3D G3DSA:3.40.190.10 146 254 9.3E-11 T 29-03-2018 CVS42_RS15695 37c4dbc83cb3cb953ed07f010d60ea45 254 SUPERFAMILY SSF53850 27 251 2.58E-40 T 29-03-2018 CVS42_RS15695 37c4dbc83cb3cb953ed07f010d60ea45 254 SMART SM00062 26 254 1.1E-7 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS15695 37c4dbc83cb3cb953ed07f010d60ea45 254 Gene3D G3DSA:3.40.190.10 20 144 9.8E-19 T 29-03-2018 CVS42_RS15695 37c4dbc83cb3cb953ed07f010d60ea45 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 250 2.9E-26 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS21405 e720fface3449081d1fde0b85d1022ee 321 Pfam PF13377 Periplasmic binding protein-like domain 163 320 7.4E-37 T 29-03-2018 CVS42_RS21405 e720fface3449081d1fde0b85d1022ee 321 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 1.7E-16 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS21405 e720fface3449081d1fde0b85d1022ee 321 SUPERFAMILY SSF53822 74 314 6.09E-46 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CVS42_RS21405 e720fface3449081d1fde0b85d1022ee 321 Gene3D G3DSA:3.40.50.2300 58 171 7.7E-14 T 29-03-2018 CVS42_RS21405 e720fface3449081d1fde0b85d1022ee 321 SUPERFAMILY SSF47413 1 54 3.38E-12 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS21405 e720fface3449081d1fde0b85d1022ee 321 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 CVS42_RS21405 e720fface3449081d1fde0b85d1022ee 321 SMART SM00354 1 72 7.5E-15 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS21405 e720fface3449081d1fde0b85d1022ee 321 Gene3D G3DSA:1.10.260.40 16 57 2.2E-17 T 29-03-2018 CVS42_RS21405 e720fface3449081d1fde0b85d1022ee 321 Gene3D G3DSA:3.40.50.2300 172 303 1.4E-34 T 29-03-2018 CVS42_RS21405 e720fface3449081d1fde0b85d1022ee 321 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.4E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS21405 e720fface3449081d1fde0b85d1022ee 321 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.4E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS21405 e720fface3449081d1fde0b85d1022ee 321 Gene3D G3DSA:1.10.10.60 2 15 0.16 T 29-03-2018 CVS42_RS13195 7620a92f4b68da4baeac4e7febcfe65b 265 Pfam PF13353 4Fe-4S single cluster domain 34 159 4.6E-21 T 29-03-2018 CVS42_RS13195 7620a92f4b68da4baeac4e7febcfe65b 265 Gene3D G3DSA:3.80.30.10 86 265 3.5E-40 T 29-03-2018 CVS42_RS13195 7620a92f4b68da4baeac4e7febcfe65b 265 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 24 257 1.1E-104 T 29-03-2018 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 CVS42_RS13195 7620a92f4b68da4baeac4e7febcfe65b 265 ProSitePatterns PS01087 Radical activating enzymes signature. 36 57 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CVS42_RS13195 7620a92f4b68da4baeac4e7febcfe65b 265 PIRSF PIRSF000371 15 65 2.0E-11 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CVS42_RS13195 7620a92f4b68da4baeac4e7febcfe65b 265 PIRSF PIRSF000371 62 263 5.0E-44 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CVS42_RS13195 7620a92f4b68da4baeac4e7febcfe65b 265 Pfam PF04055 Radical SAM superfamily 42 196 3.1E-26 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS13195 7620a92f4b68da4baeac4e7febcfe65b 265 SUPERFAMILY SSF102114 41 237 3.14E-24 T 29-03-2018 CVS42_RS14660 fedd3e80cde87a6957f8cc3c740c25b9 575 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 1 563 8.0E-180 T 29-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CVS42_RS14660 fedd3e80cde87a6957f8cc3c740c25b9 575 PIRSF PIRSF000719 1 575 1.1E-240 T 29-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CVS42_RS14660 fedd3e80cde87a6957f8cc3c740c25b9 575 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 2.8E-243 T 29-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CVS42_RS14660 fedd3e80cde87a6957f8cc3c740c25b9 575 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 44.116 T 29-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CVS42_RS18265 5f0ffd7e104b6abce47e32e09ce5df36 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.3E-44 T 29-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CVS42_RS18265 5f0ffd7e104b6abce47e32e09ce5df36 311 SUPERFAMILY SSF51735 1 145 1.33E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS18265 5f0ffd7e104b6abce47e32e09ce5df36 311 Gene3D G3DSA:3.40.50.720 2 147 2.1E-39 T 29-03-2018 CVS42_RS18265 5f0ffd7e104b6abce47e32e09ce5df36 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 56.26 T 29-03-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CVS42_RS18265 5f0ffd7e104b6abce47e32e09ce5df36 311 PIRSF PIRSF000102 1 306 4.3E-57 T 29-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CVS42_RS18265 5f0ffd7e104b6abce47e32e09ce5df36 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 29-03-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CVS42_RS18265 5f0ffd7e104b6abce47e32e09ce5df36 311 SUPERFAMILY SSF56327 146 310 3.13E-43 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CVS42_RS18265 5f0ffd7e104b6abce47e32e09ce5df36 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 7.1E-128 T 29-03-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 CVS42_RS18265 5f0ffd7e104b6abce47e32e09ce5df36 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 1.9E-50 T 29-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CVS42_RS18265 5f0ffd7e104b6abce47e32e09ce5df36 311 Gene3D G3DSA:3.90.110.10 148 311 2.1E-44 T 29-03-2018 CVS42_RS03010 59b40eeac749eeabbac7cd661c70666e 307 SUPERFAMILY SSF117892 52 186 1.57E-37 T 29-03-2018 IPR001107 Band 7 domain CVS42_RS03010 59b40eeac749eeabbac7cd661c70666e 307 SMART SM00244 21 179 3.8E-57 T 29-03-2018 IPR001107 Band 7 domain CVS42_RS03010 59b40eeac749eeabbac7cd661c70666e 307 PRINTS PR00721 Stomatin signature 76 97 1.3E-28 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CVS42_RS03010 59b40eeac749eeabbac7cd661c70666e 307 PRINTS PR00721 Stomatin signature 131 154 1.3E-28 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CVS42_RS03010 59b40eeac749eeabbac7cd661c70666e 307 PRINTS PR00721 Stomatin signature 174 195 1.3E-28 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CVS42_RS03010 59b40eeac749eeabbac7cd661c70666e 307 PRINTS PR00721 Stomatin signature 111 128 1.3E-28 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CVS42_RS03010 59b40eeac749eeabbac7cd661c70666e 307 PRINTS PR00721 Stomatin signature 155 173 1.3E-28 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CVS42_RS03010 59b40eeac749eeabbac7cd661c70666e 307 Pfam PF01145 SPFH domain / Band 7 family 25 194 1.7E-30 T 29-03-2018 IPR001107 Band 7 domain CVS42_RS20550 6449eab8969fab2047cba2a90b2b1d21 125 Pfam PF07226 Protein of unknown function (DUF1422) 10 116 1.3E-40 T 29-03-2018 IPR009867 Protein of unknown function DUF1422 CVS42_RS20550 6449eab8969fab2047cba2a90b2b1d21 125 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 13 99 2.0E-22 T 29-03-2018 IPR009867 Protein of unknown function DUF1422 CVS42_RS20150 a80eed0f56ac90329daa8a43f662a95c 425 Pfam PF00999 Sodium/hydrogen exchanger family 31 415 1.7E-56 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CVS42_RS13020 892fe1e21828fa0a1bb5d974c21a97c6 317 Gene3D G3DSA:3.90.550.10 1 267 4.7E-40 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS13020 892fe1e21828fa0a1bb5d974c21a97c6 317 Pfam PF00535 Glycosyl transferase family 2 4 163 1.8E-26 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CVS42_RS13020 892fe1e21828fa0a1bb5d974c21a97c6 317 SUPERFAMILY SSF53448 2 223 2.34E-46 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS19750 63ba8e57188b26a510de084ec49b9bfc 354 Gene3D G3DSA:3.30.250.10 269 326 1.8E-21 T 29-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CVS42_RS19750 63ba8e57188b26a510de084ec49b9bfc 354 PRINTS PR00142 RecA protein signature 165 194 2.4E-80 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CVS42_RS19750 63ba8e57188b26a510de084ec49b9bfc 354 PRINTS PR00142 RecA protein signature 210 238 2.4E-80 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CVS42_RS19750 63ba8e57188b26a510de084ec49b9bfc 354 PRINTS PR00142 RecA protein signature 297 314 2.4E-80 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CVS42_RS19750 63ba8e57188b26a510de084ec49b9bfc 354 PRINTS PR00142 RecA protein signature 93 122 2.4E-80 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CVS42_RS19750 63ba8e57188b26a510de084ec49b9bfc 354 PRINTS PR00142 RecA protein signature 243 272 2.4E-80 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CVS42_RS19750 63ba8e57188b26a510de084ec49b9bfc 354 PRINTS PR00142 RecA protein signature 127 156 2.4E-80 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CVS42_RS19750 63ba8e57188b26a510de084ec49b9bfc 354 Gene3D G3DSA:3.40.50.300 26 268 2.3E-45 T 29-03-2018 CVS42_RS19750 63ba8e57188b26a510de084ec49b9bfc 354 SMART SM00382 57 228 1.7E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS19750 63ba8e57188b26a510de084ec49b9bfc 354 SUPERFAMILY SSF52540 4 267 5.58E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS19750 63ba8e57188b26a510de084ec49b9bfc 354 Pfam PF00154 recA bacterial DNA recombination protein 7 268 1.4E-145 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CVS42_RS19750 63ba8e57188b26a510de084ec49b9bfc 354 ProSitePatterns PS00321 recA signature. 213 221 - T 29-03-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CVS42_RS19750 63ba8e57188b26a510de084ec49b9bfc 354 Hamap MF_00268 Protein RecA [recA]. 5 329 50.94 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CVS42_RS19750 63ba8e57188b26a510de084ec49b9bfc 354 SUPERFAMILY SSF54752 268 324 1.15E-18 T 29-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CVS42_RS19750 63ba8e57188b26a510de084ec49b9bfc 354 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.3E-171 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CVS42_RS07020 6e345c12f2fa539b6cc5ce07ed708386 314 Gene3D G3DSA:3.40.190.10 103 190 1.3E-14 T 29-03-2018 CVS42_RS07020 6e345c12f2fa539b6cc5ce07ed708386 314 Pfam PF03466 LysR substrate binding domain 101 310 2.2E-30 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS07020 6e345c12f2fa539b6cc5ce07ed708386 314 SUPERFAMILY SSF53850 101 313 1.99E-30 T 29-03-2018 CVS42_RS07020 6e345c12f2fa539b6cc5ce07ed708386 314 Gene3D G3DSA:1.10.10.10 6 102 1.7E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS07020 6e345c12f2fa539b6cc5ce07ed708386 314 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 10 308 5.5E-147 T 29-03-2018 IPR011781 D-serine deaminase transcriptional activator CVS42_RS07020 6e345c12f2fa539b6cc5ce07ed708386 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 78 1.4E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS07020 6e345c12f2fa539b6cc5ce07ed708386 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 55 66 4.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS07020 6e345c12f2fa539b6cc5ce07ed708386 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 4.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS07020 6e345c12f2fa539b6cc5ce07ed708386 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 55 4.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS07020 6e345c12f2fa539b6cc5ce07ed708386 314 SUPERFAMILY SSF46785 19 125 1.5E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS07020 6e345c12f2fa539b6cc5ce07ed708386 314 Gene3D G3DSA:3.40.190.10 191 281 2.1E-16 T 29-03-2018 CVS42_RS19695 4de6160fd4037dc305ddb8f0b0ca8a84 275 Gene3D G3DSA:3.40.710.10 21 274 9.4E-50 T 29-03-2018 CVS42_RS19695 4de6160fd4037dc305ddb8f0b0ca8a84 275 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 2.6E-12 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CVS42_RS19695 4de6160fd4037dc305ddb8f0b0ca8a84 275 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 139 152 2.6E-12 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CVS42_RS19695 4de6160fd4037dc305ddb8f0b0ca8a84 275 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 112 129 2.6E-12 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CVS42_RS19695 4de6160fd4037dc305ddb8f0b0ca8a84 275 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 256 2.0E-65 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CVS42_RS19695 4de6160fd4037dc305ddb8f0b0ca8a84 275 SUPERFAMILY SSF56601 9 274 1.24E-65 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CVS42_RS17810 fb45a66a450842fc9c478deeada74f9a 183 SUPERFAMILY SSF55729 4 179 1.71E-43 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS17810 fb45a66a450842fc9c478deeada74f9a 183 Pfam PF13302 Acetyltransferase (GNAT) domain 15 155 3.0E-18 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS17810 fb45a66a450842fc9c478deeada74f9a 183 Gene3D G3DSA:3.40.630.30 2 182 7.2E-29 T 29-03-2018 CVS42_RS19340 23d10686d2683045d7b6efed501df67d 839 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 241 252 - T 29-03-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 CVS42_RS19340 23d10686d2683045d7b6efed501df67d 839 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 600 614 - T 29-03-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 CVS42_RS19340 23d10686d2683045d7b6efed501df67d 839 Pfam PF01295 Adenylate cyclase, class-I 227 824 1.1E-252 T 29-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CVS42_RS19340 23d10686d2683045d7b6efed501df67d 839 Pfam PF12633 Adenylate cyclase NT domain 5 200 1.2E-75 T 29-03-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 CVS42_RS19340 23d10686d2683045d7b6efed501df67d 839 PIRSF PIRSF001444 1 838 0.0 T 29-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CVS42_RS20355 1d53a9417b71fd7b2cecb1c87a9ae894 510 Pfam PF00221 Aromatic amino acid lyase 11 461 1.0E-184 T 29-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 CVS42_RS20355 1d53a9417b71fd7b2cecb1c87a9ae894 510 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 508 3.8E-212 T 29-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CVS42_RS20355 1d53a9417b71fd7b2cecb1c87a9ae894 510 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 43.795 T 29-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CVS42_RS20355 1d53a9417b71fd7b2cecb1c87a9ae894 510 Gene3D G3DSA:1.20.200.10 199 504 5.5E-119 T 29-03-2018 CVS42_RS20355 1d53a9417b71fd7b2cecb1c87a9ae894 510 SUPERFAMILY SSF48557 4 497 2.83E-189 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CVS42_RS20355 1d53a9417b71fd7b2cecb1c87a9ae894 510 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 154 - T 29-03-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 CVS42_RS20355 1d53a9417b71fd7b2cecb1c87a9ae894 510 Gene3D G3DSA:1.10.275.10 2 197 5.0E-73 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CVS42_RS08850 e3d1215bdf0640223dcb9a13b05f294a 280 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 29-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CVS42_RS08850 e3d1215bdf0640223dcb9a13b05f294a 280 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 29-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CVS42_RS08850 e3d1215bdf0640223dcb9a13b05f294a 280 Gene3D G3DSA:3.20.20.150 1 280 4.8E-61 T 29-03-2018 CVS42_RS08850 e3d1215bdf0640223dcb9a13b05f294a 280 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 29-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CVS42_RS08850 e3d1215bdf0640223dcb9a13b05f294a 280 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 276 3.3E-101 T 29-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CVS42_RS08850 e3d1215bdf0640223dcb9a13b05f294a 280 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 41.125 T 29-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CVS42_RS08850 e3d1215bdf0640223dcb9a13b05f294a 280 SMART SM00518 3 279 2.0E-114 T 29-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CVS42_RS08850 e3d1215bdf0640223dcb9a13b05f294a 280 Pfam PF01261 Xylose isomerase-like TIM barrel 19 238 3.0E-38 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CVS42_RS08850 e3d1215bdf0640223dcb9a13b05f294a 280 SUPERFAMILY SSF51658 1 279 4.19E-98 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CVS42_RS02270 16f35db7b3fb2a8113822e88bd0fa0f6 242 Gene3D G3DSA:3.40.1130.10 27 238 1.2E-37 T 29-03-2018 CVS42_RS02270 16f35db7b3fb2a8113822e88bd0fa0f6 242 Pfam PF01553 Acyltransferase 52 180 1.5E-31 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CVS42_RS02270 16f35db7b3fb2a8113822e88bd0fa0f6 242 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 1.2E-43 T 29-03-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 CVS42_RS02270 16f35db7b3fb2a8113822e88bd0fa0f6 242 SMART SM00563 67 182 9.4E-42 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CVS42_RS02270 16f35db7b3fb2a8113822e88bd0fa0f6 242 SUPERFAMILY SSF69593 3 235 2.35E-49 T 29-03-2018 CVS42_RS04355 559c88d0cc0b2856f6ad0d72f6ac23a6 335 Gene3D G3DSA:3.40.50.40 209 335 2.5E-39 T 29-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 CVS42_RS04355 559c88d0cc0b2856f6ad0d72f6ac23a6 335 SUPERFAMILY SSF53774 2 334 1.22E-110 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CVS42_RS04355 559c88d0cc0b2856f6ad0d72f6ac23a6 335 Gene3D G3DSA:3.40.50.1170 1 207 1.2E-82 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CVS42_RS04355 559c88d0cc0b2856f6ad0d72f6ac23a6 335 PIRSF PIRSF001220 1 333 6.3E-94 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CVS42_RS04355 559c88d0cc0b2856f6ad0d72f6ac23a6 335 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 7 15 - T 29-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CVS42_RS04355 559c88d0cc0b2856f6ad0d72f6ac23a6 335 PRINTS PR00139 Asparaginase/glutaminase family signature 259 277 1.1E-15 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CVS42_RS04355 559c88d0cc0b2856f6ad0d72f6ac23a6 335 PRINTS PR00139 Asparaginase/glutaminase family signature 5 16 1.1E-15 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CVS42_RS04355 559c88d0cc0b2856f6ad0d72f6ac23a6 335 PRINTS PR00139 Asparaginase/glutaminase family signature 82 100 1.1E-15 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CVS42_RS04355 559c88d0cc0b2856f6ad0d72f6ac23a6 335 Pfam PF00710 Asparaginase, N-terminal 5 187 2.0E-66 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CVS42_RS04355 559c88d0cc0b2856f6ad0d72f6ac23a6 335 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 83 93 - T 29-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CVS42_RS04355 559c88d0cc0b2856f6ad0d72f6ac23a6 335 PIRSF PIRSF500176 1 331 1.1E-109 T 29-03-2018 CVS42_RS04355 559c88d0cc0b2856f6ad0d72f6ac23a6 335 SMART SM00870 4 322 1.3E-140 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CVS42_RS04355 559c88d0cc0b2856f6ad0d72f6ac23a6 335 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 2 334 2.1E-116 T 29-03-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 CVS42_RS16910 c39d65e43ccf09f869b849f2cb1f194e 306 Gene3D G3DSA:3.10.350.10 40 88 5.5E-7 T 29-03-2018 CVS42_RS16910 c39d65e43ccf09f869b849f2cb1f194e 306 SUPERFAMILY SSF141523 93 148 1.7E-26 T 29-03-2018 CVS42_RS16910 c39d65e43ccf09f869b849f2cb1f194e 306 SUPERFAMILY SSF141523 176 232 1.7E-26 T 29-03-2018 CVS42_RS16910 c39d65e43ccf09f869b849f2cb1f194e 306 Pfam PF01476 LysM domain 52 87 1.3E-4 T 29-03-2018 IPR018392 LysM domain CVS42_RS16910 c39d65e43ccf09f869b849f2cb1f194e 306 Gene3D G3DSA:2.40.440.10 92 233 3.5E-27 T 29-03-2018 CVS42_RS16910 c39d65e43ccf09f869b849f2cb1f194e 306 Pfam PF03734 L,D-transpeptidase catalytic domain 99 230 7.8E-17 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CVS42_RS18365 62703cb2613a544053a82c7efc275eaa 100 Gene3D G3DSA:3.30.1200.10 1 100 9.0E-33 T 29-03-2018 IPR003746 Protein of unknown function DUF167 CVS42_RS18365 62703cb2613a544053a82c7efc275eaa 100 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 97 20.97 T 29-03-2018 IPR003746 Protein of unknown function DUF167 CVS42_RS18365 62703cb2613a544053a82c7efc275eaa 100 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 6 90 1.1E-27 T 29-03-2018 IPR005228 Conserved hypothetical protein CHP00251 CVS42_RS18365 62703cb2613a544053a82c7efc275eaa 100 SUPERFAMILY SSF69786 2 97 8.76E-33 T 29-03-2018 IPR003746 Protein of unknown function DUF167 CVS42_RS18365 62703cb2613a544053a82c7efc275eaa 100 SMART SM01152 7 83 2.2E-37 T 29-03-2018 IPR003746 Protein of unknown function DUF167 CVS42_RS18365 62703cb2613a544053a82c7efc275eaa 100 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 81 5.2E-26 T 29-03-2018 IPR003746 Protein of unknown function DUF167 CVS42_RS01295 d8f5f6de01974f36839cbd6cb5e81499 687 SUPERFAMILY SSF52540 25 170 2.52E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS01295 d8f5f6de01974f36839cbd6cb5e81499 687 SUPERFAMILY SSF52540 229 440 2.52E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS01295 d8f5f6de01974f36839cbd6cb5e81499 687 Gene3D G3DSA:3.40.50.300 133 438 2.4E-52 T 29-03-2018 CVS42_RS01295 d8f5f6de01974f36839cbd6cb5e81499 687 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 19 685 1.1E-185 T 29-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CVS42_RS01295 d8f5f6de01974f36839cbd6cb5e81499 687 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 27 683 49.024 T 29-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CVS42_RS01295 d8f5f6de01974f36839cbd6cb5e81499 687 Gene3D G3DSA:3.40.50.300 448 674 6.6E-34 T 29-03-2018 CVS42_RS01295 d8f5f6de01974f36839cbd6cb5e81499 687 Pfam PF13538 UvrD-like helicase C-terminal domain 614 658 1.1E-15 T 29-03-2018 IPR027785 UvrD-like helicase C-terminal domain CVS42_RS01295 d8f5f6de01974f36839cbd6cb5e81499 687 Pfam PF13604 AAA domain 236 400 1.3E-30 T 29-03-2018 CVS42_RS01295 d8f5f6de01974f36839cbd6cb5e81499 687 SUPERFAMILY SSF52540 366 461 4.43E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS01295 d8f5f6de01974f36839cbd6cb5e81499 687 SUPERFAMILY SSF52540 516 685 4.43E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS07620 f2b317a0acc994c0fcb4ec3b934b09af 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 1.4E-232 T 29-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CVS42_RS07620 f2b317a0acc994c0fcb4ec3b934b09af 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CVS42_RS07620 f2b317a0acc994c0fcb4ec3b934b09af 404 Gene3D G3DSA:3.90.1150.10 232 404 5.7E-53 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS07620 f2b317a0acc994c0fcb4ec3b934b09af 404 Pfam PF00266 Aminotransferase class-V 5 368 8.2E-85 T 29-03-2018 IPR000192 Aminotransferase class V domain CVS42_RS07620 f2b317a0acc994c0fcb4ec3b934b09af 404 SUPERFAMILY SSF53383 5 391 4.74E-112 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS07620 f2b317a0acc994c0fcb4ec3b934b09af 404 Gene3D G3DSA:3.40.640.10 1 231 3.5E-51 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS07620 f2b317a0acc994c0fcb4ec3b934b09af 404 PIRSF PIRSF005572 2 384 1.9E-135 T 29-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CVS42_RS07620 f2b317a0acc994c0fcb4ec3b934b09af 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 55.262 T 29-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CVS42_RS10465 76ab4d9f7d74fdc9dcf865ebc29391dd 475 Pfam PF00929 Exonuclease 15 194 3.2E-25 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CVS42_RS10465 76ab4d9f7d74fdc9dcf865ebc29391dd 475 Pfam PF08411 Exonuclease C-terminal 214 473 3.4E-101 T 29-03-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 CVS42_RS10465 76ab4d9f7d74fdc9dcf865ebc29391dd 475 PIRSF PIRSF000977 5 475 4.8E-199 T 29-03-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 CVS42_RS10465 76ab4d9f7d74fdc9dcf865ebc29391dd 475 SUPERFAMILY SSF53098 12 474 1.71E-134 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS10465 76ab4d9f7d74fdc9dcf865ebc29391dd 475 Gene3D G3DSA:3.30.420.10 3 203 3.5E-25 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS21790 1c9f6bb8316dd4ec1f5e66e640481ccd 511 Pfam PF03545 Yersinia virulence determinant (YopE) 126 195 2.4E-21 T 29-03-2018 IPR014773 Virulence factor YopE uncharacterised domain CVS42_RS21790 1c9f6bb8316dd4ec1f5e66e640481ccd 511 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 41 58 7.8E-22 T 29-03-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 CVS42_RS21790 1c9f6bb8316dd4ec1f5e66e640481ccd 511 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 126 143 7.8E-22 T 29-03-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 CVS42_RS21790 1c9f6bb8316dd4ec1f5e66e640481ccd 511 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 209 226 7.8E-22 T 29-03-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 CVS42_RS21790 1c9f6bb8316dd4ec1f5e66e640481ccd 511 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 25 38 7.8E-22 T 29-03-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 CVS42_RS21790 1c9f6bb8316dd4ec1f5e66e640481ccd 511 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 175 193 7.8E-22 T 29-03-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 CVS42_RS21790 1c9f6bb8316dd4ec1f5e66e640481ccd 511 SUPERFAMILY SSF47233 92 225 5.62E-50 T 29-03-2018 IPR014773 Virulence factor YopE uncharacterised domain CVS42_RS21790 1c9f6bb8316dd4ec1f5e66e640481ccd 511 Gene3D G3DSA:1.20.120.260 97 222 5.1E-43 T 29-03-2018 IPR014773 Virulence factor YopE uncharacterised domain CVS42_RS08075 632c09fe7c6d2d3e8cbbcf0832e3916a 623 Pfam PF07693 KAP family P-loop domain 15 393 9.1E-50 T 29-03-2018 IPR011646 KAP family P-loop domain CVS42_RS08075 632c09fe7c6d2d3e8cbbcf0832e3916a 623 Gene3D G3DSA:3.40.50.300 12 266 1.5E-10 T 29-03-2018 CVS42_RS08075 632c09fe7c6d2d3e8cbbcf0832e3916a 623 SUPERFAMILY SSF52540 180 324 5.97E-10 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS08075 632c09fe7c6d2d3e8cbbcf0832e3916a 623 SUPERFAMILY SSF52540 32 122 5.97E-10 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00235 edc3e2ea39e81479fd870b098ddb0bac 346 Gene3D G3DSA:3.40.50.1820 28 346 5.5E-35 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS00235 edc3e2ea39e81479fd870b098ddb0bac 346 SUPERFAMILY SSF53474 51 340 2.84E-35 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS00235 edc3e2ea39e81479fd870b098ddb0bac 346 Pfam PF12146 Serine aminopeptidase, S33 71 329 1.1E-60 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CVS42_RS10690 79bf22af2b35c45c69a380ce2cf5afdf 395 Gene3D G3DSA:1.20.1630.10 41 336 1.6E-41 T 29-03-2018 CVS42_RS18665 55e5fd438aa443347f265635d0e8a0c3 390 SUPERFAMILY SSF53383 16 381 5.56E-117 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS18665 55e5fd438aa443347f265635d0e8a0c3 390 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 189 203 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CVS42_RS18665 55e5fd438aa443347f265635d0e8a0c3 390 Gene3D G3DSA:3.90.1150.10 247 385 5.9E-51 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS18665 55e5fd438aa443347f265635d0e8a0c3 390 Gene3D G3DSA:3.40.640.10 1 246 8.9E-56 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS18665 55e5fd438aa443347f265635d0e8a0c3 390 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 381 3.0E-193 T 29-03-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 CVS42_RS18665 55e5fd438aa443347f265635d0e8a0c3 390 PIRSF PIRSF001434 1 383 6.9E-139 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CVS42_RS18665 55e5fd438aa443347f265635d0e8a0c3 390 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 380 1.4E-139 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CVS42_RS19000 9fce802fa682d7e839f12be0be51eea5 342 Gene3D G3DSA:1.10.220.30 16 79 1.5E-9 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CVS42_RS19000 9fce802fa682d7e839f12be0be51eea5 342 SUPERFAMILY SSF48029 15 109 2.22E-15 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CVS42_RS19000 9fce802fa682d7e839f12be0be51eea5 342 Pfam PF14842 FliG N-terminal domain 17 110 3.0E-20 T 29-03-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CVS42_RS19000 9fce802fa682d7e839f12be0be51eea5 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 205 230 1.4E-31 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CVS42_RS19000 9fce802fa682d7e839f12be0be51eea5 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 44 70 1.4E-31 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CVS42_RS19000 9fce802fa682d7e839f12be0be51eea5 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 124 147 1.4E-31 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CVS42_RS19000 9fce802fa682d7e839f12be0be51eea5 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 281 307 1.4E-31 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CVS42_RS19000 9fce802fa682d7e839f12be0be51eea5 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 15 31 1.4E-31 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CVS42_RS19000 9fce802fa682d7e839f12be0be51eea5 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 257 277 1.4E-31 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CVS42_RS19000 9fce802fa682d7e839f12be0be51eea5 342 Pfam PF01706 FliG C-terminal domain 228 332 1.9E-27 T 29-03-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal CVS42_RS19000 9fce802fa682d7e839f12be0be51eea5 342 SUPERFAMILY SSF48029 125 333 6.02E-55 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CVS42_RS19000 9fce802fa682d7e839f12be0be51eea5 342 Pfam PF14841 FliG middle domain 126 198 2.6E-18 T 29-03-2018 IPR032779 Flagellar motor switch protein FliG, middle domain CVS42_RS19000 9fce802fa682d7e839f12be0be51eea5 342 Gene3D G3DSA:1.10.220.30 205 340 6.6E-24 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CVS42_RS19000 9fce802fa682d7e839f12be0be51eea5 342 Gene3D G3DSA:1.10.220.30 80 204 2.0E-12 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CVS42_RS08235 f7f3190ed03d70a056f8e9b97ea5485e 679 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 506 5.0E-145 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CVS42_RS08235 f7f3190ed03d70a056f8e9b97ea5485e 679 SUPERFAMILY SSF69349 445 626 5.57E-47 T 29-03-2018 CVS42_RS08235 f7f3190ed03d70a056f8e9b97ea5485e 679 Pfam PF05954 Phage late control gene D protein (GPD) 30 327 4.6E-86 T 29-03-2018 CVS42_RS08235 f7f3190ed03d70a056f8e9b97ea5485e 679 Gene3D G3DSA:2.40.50.230 373 455 2.0E-36 T 29-03-2018 IPR006531 Gp5 N-terminal CVS42_RS08235 f7f3190ed03d70a056f8e9b97ea5485e 679 Gene3D G3DSA:3.55.50.10 98 189 3.7E-28 T 29-03-2018 CVS42_RS08235 f7f3190ed03d70a056f8e9b97ea5485e 679 SUPERFAMILY SSF69279 200 359 1.11E-41 T 29-03-2018 CVS42_RS08235 f7f3190ed03d70a056f8e9b97ea5485e 679 SUPERFAMILY SSF69255 367 454 1.1E-33 T 29-03-2018 CVS42_RS08235 f7f3190ed03d70a056f8e9b97ea5485e 679 SUPERFAMILY SSF69279 15 185 3.0E-55 T 29-03-2018 CVS42_RS08235 f7f3190ed03d70a056f8e9b97ea5485e 679 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 9 524 2.2E-204 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CVS42_RS17030 1b16cb168dada2ef09b7faca2614032f 27 Gene3D G3DSA:1.10.10.350 1 27 1.2E-4 T 29-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CVS42_RS01620 cb033baa0803baaf23e4b4197a1d393e 271 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 19 251 6.2E-67 T 29-03-2018 IPR006430 Phage portal protein PBSX family CVS42_RS01620 cb033baa0803baaf23e4b4197a1d393e 271 Pfam PF04860 Phage portal protein 18 263 2.0E-13 T 29-03-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein CVS42_RS01880 b5079f1b3415430839506ab0168e44e2 402 SUPERFAMILY SSF56349 100 388 1.01E-50 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CVS42_RS01880 b5079f1b3415430839506ab0168e44e2 402 Gene3D G3DSA:1.10.150.130 89 211 3.4E-17 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CVS42_RS01880 b5079f1b3415430839506ab0168e44e2 402 Pfam PF00589 Phage integrase family 235 375 1.2E-15 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS01880 b5079f1b3415430839506ab0168e44e2 402 Pfam PF13356 Arm DNA-binding domain 4 92 4.7E-11 T 29-03-2018 IPR025166 Integrase, DNA-binding domain CVS42_RS01880 b5079f1b3415430839506ab0168e44e2 402 Gene3D G3DSA:1.10.443.10 212 387 7.0E-20 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS03825 427db132215594edda2a539b1af9789e 187 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 176 9.4E-65 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CVS42_RS03825 427db132215594edda2a539b1af9789e 187 Pfam PF04279 Intracellular septation protein A 1 175 1.8E-68 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CVS42_RS03825 427db132215594edda2a539b1af9789e 187 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 18.688 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 SMART SM00382 153 366 1.9E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 365 433 3.8E-32 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 SMART SM00760 364 433 7.4E-45 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 Pfam PF11638 DnaA N-terminal domain 4 62 1.3E-19 T 29-03-2018 IPR024633 DnaA N-terminal domain CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 SUPERFAMILY SSF52540 121 332 1.84E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 Gene3D G3DSA:1.10.8.60 287 358 3.8E-28 T 29-03-2018 CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 414 433 1.3E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 252 279 1.3E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 218 232 1.3E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 186 200 1.3E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 154 174 1.3E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 Pfam PF00308 Bacterial dnaA protein 122 338 2.4E-99 T 29-03-2018 IPR013317 Chromosomal replication initiator protein DnaA CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 Gene3D G3DSA:3.40.50.300 118 285 5.9E-23 T 29-03-2018 CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 Gene3D G3DSA:1.10.1750.10 359 455 6.3E-36 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 454 2.2E-186 T 29-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 SUPERFAMILY SSF48295 353 455 2.2E-37 T 29-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 ProSitePatterns PS01008 DnaA protein signature. 414 433 - T 29-03-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CVS42_RS00050 6c7511607c8cfe7017ef9c7670d35ce6 456 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 455 34.419 T 29-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CVS42_RS16735 389d7ef81a6aeef35bc05ff3b563b00a 319 PIRSF PIRSF005303 1 318 5.4E-85 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CVS42_RS16735 389d7ef81a6aeef35bc05ff3b563b00a 319 Gene3D G3DSA:3.90.650.10 142 319 3.3E-48 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS16735 389d7ef81a6aeef35bc05ff3b563b00a 319 Pfam PF02769 AIR synthase related protein, C-terminal domain 147 296 4.5E-10 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS16735 389d7ef81a6aeef35bc05ff3b563b00a 319 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 318 1.8E-108 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CVS42_RS16735 389d7ef81a6aeef35bc05ff3b563b00a 319 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 315 32.449 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CVS42_RS16735 389d7ef81a6aeef35bc05ff3b563b00a 319 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 134 2.4E-23 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CVS42_RS16735 389d7ef81a6aeef35bc05ff3b563b00a 319 SUPERFAMILY SSF56042 140 299 2.39E-38 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CVS42_RS16735 389d7ef81a6aeef35bc05ff3b563b00a 319 Gene3D G3DSA:3.30.1330.10 1 141 5.2E-35 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CVS42_RS16735 389d7ef81a6aeef35bc05ff3b563b00a 319 SUPERFAMILY SSF55326 1 135 7.15E-37 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CVS42_RS16090 394d13a1197688e0f1d39b7ff7b43953 476 SUPERFAMILY SSF55604 401 469 1.83E-19 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CVS42_RS16090 394d13a1197688e0f1d39b7ff7b43953 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 413 430 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CVS42_RS16090 394d13a1197688e0f1d39b7ff7b43953 476 Pfam PF00367 phosphotransferase system, EIIB 404 435 8.4E-14 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CVS42_RS16090 394d13a1197688e0f1d39b7ff7b43953 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 376 459 8.3E-24 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CVS42_RS16090 394d13a1197688e0f1d39b7ff7b43953 476 Gene3D G3DSA:3.30.1360.60 398 473 8.4E-26 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CVS42_RS16090 394d13a1197688e0f1d39b7ff7b43953 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 1.9E-72 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CVS42_RS16090 394d13a1197688e0f1d39b7ff7b43953 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 1.2E-196 T 29-03-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 CVS42_RS16160 28ac251a23b79cfcea99b942a29c5c83 538 SMART SM00267 368 538 6.6E-59 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS16160 28ac251a23b79cfcea99b942a29c5c83 538 Pfam PF00990 Diguanylate cyclase, GGDEF domain 380 534 4.0E-46 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS16160 28ac251a23b79cfcea99b942a29c5c83 538 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 379 536 5.3E-47 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS16160 28ac251a23b79cfcea99b942a29c5c83 538 SUPERFAMILY SSF55073 383 536 1.96E-49 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS16160 28ac251a23b79cfcea99b942a29c5c83 538 Gene3D G3DSA:3.30.70.270 373 538 2.2E-55 T 29-03-2018 CVS42_RS07585 1201cda7a0bcaf949e82d8d55415a675 300 SMART SM00028 129 162 300.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS07585 1201cda7a0bcaf949e82d8d55415a675 300 SMART SM00028 61 94 4.9 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS07585 1201cda7a0bcaf949e82d8d55415a675 300 SMART SM00028 233 266 11.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS07585 1201cda7a0bcaf949e82d8d55415a675 300 SMART SM00028 95 128 3.8E-6 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS07585 1201cda7a0bcaf949e82d8d55415a675 300 PIRSF PIRSF004654 1 286 3.5E-109 T 29-03-2018 IPR023605 Lipoprotein NlpI CVS42_RS07585 1201cda7a0bcaf949e82d8d55415a675 300 Gene3D G3DSA:1.25.40.10 22 284 1.5E-42 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS07585 1201cda7a0bcaf949e82d8d55415a675 300 Pfam PF00515 Tetratricopeptide repeat 95 128 1.0E-6 T 29-03-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CVS42_RS07585 1201cda7a0bcaf949e82d8d55415a675 300 SUPERFAMILY SSF48452 27 280 8.6E-72 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS03540 7883f0fb477e26e02dc9ee577ae617ae 415 Pfam PF00270 DEAD/DEAH box helicase 28 194 3.3E-50 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CVS42_RS03540 7883f0fb477e26e02dc9ee577ae617ae 415 SUPERFAMILY SSF52540 76 358 9.08E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS03540 7883f0fb477e26e02dc9ee577ae617ae 415 Gene3D G3DSA:3.40.50.300 6 224 6.0E-61 T 29-03-2018 CVS42_RS03540 7883f0fb477e26e02dc9ee577ae617ae 415 Pfam PF00271 Helicase conserved C-terminal domain 241 341 5.9E-26 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS03540 7883f0fb477e26e02dc9ee577ae617ae 415 SMART SM00490 260 341 8.4E-32 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS03540 7883f0fb477e26e02dc9ee577ae617ae 415 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CVS42_RS03540 7883f0fb477e26e02dc9ee577ae617ae 415 SMART SM00487 23 224 2.0E-61 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS03540 7883f0fb477e26e02dc9ee577ae617ae 415 Gene3D G3DSA:3.40.50.300 225 414 6.6E-43 T 29-03-2018 CVS42_RS17680 6d0fc4a2cd4ab5080fc8275749221bef 71 Pfam PF01165 Ribosomal protein S21 4 56 9.9E-22 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17680 6d0fc4a2cd4ab5080fc8275749221bef 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.5E-16 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17680 6d0fc4a2cd4ab5080fc8275749221bef 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.5E-16 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17680 6d0fc4a2cd4ab5080fc8275749221bef 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.5E-16 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17680 6d0fc4a2cd4ab5080fc8275749221bef 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.5E-16 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17680 6d0fc4a2cd4ab5080fc8275749221bef 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.633 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17680 6d0fc4a2cd4ab5080fc8275749221bef 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-14 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17680 6d0fc4a2cd4ab5080fc8275749221bef 71 Gene3D G3DSA:1.20.5.1150 16 52 1.4E-17 T 29-03-2018 CVS42_RS17680 6d0fc4a2cd4ab5080fc8275749221bef 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.5E-24 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17680 6d0fc4a2cd4ab5080fc8275749221bef 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 29-03-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS03620 acfc3f28b1eea5071723eeaf855f8192 215 Gene3D G3DSA:1.10.10.10 121 215 3.8E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS03620 acfc3f28b1eea5071723eeaf855f8192 215 Gene3D G3DSA:3.40.50.2300 1 120 8.4E-28 T 29-03-2018 CVS42_RS03620 acfc3f28b1eea5071723eeaf855f8192 215 SUPERFAMILY SSF52172 1 170 1.49E-32 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS03620 acfc3f28b1eea5071723eeaf855f8192 215 SMART SM00862 140 211 1.9E-26 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS03620 acfc3f28b1eea5071723eeaf855f8192 215 SMART SM00448 2 110 1.8E-34 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS03620 acfc3f28b1eea5071723eeaf855f8192 215 Pfam PF00486 Transcriptional regulatory protein, C terminal 141 211 8.5E-25 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS03620 acfc3f28b1eea5071723eeaf855f8192 215 Pfam PF00072 Response regulator receiver domain 4 111 3.8E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS11755 a86a0bcaf2312933e5d720afeab9e2a2 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.3E-86 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CVS42_RS11755 a86a0bcaf2312933e5d720afeab9e2a2 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.3E-86 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CVS42_RS11755 a86a0bcaf2312933e5d720afeab9e2a2 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.3E-86 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CVS42_RS11755 a86a0bcaf2312933e5d720afeab9e2a2 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.3E-86 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CVS42_RS11755 a86a0bcaf2312933e5d720afeab9e2a2 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.3E-86 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CVS42_RS11755 a86a0bcaf2312933e5d720afeab9e2a2 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.3E-86 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CVS42_RS11755 a86a0bcaf2312933e5d720afeab9e2a2 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.3E-86 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CVS42_RS11755 a86a0bcaf2312933e5d720afeab9e2a2 284 Gene3D G3DSA:3.40.50.720 141 264 4.0E-37 T 29-03-2018 CVS42_RS11755 a86a0bcaf2312933e5d720afeab9e2a2 284 SUPERFAMILY SSF51735 123 279 1.23E-51 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS11755 a86a0bcaf2312933e5d720afeab9e2a2 284 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 29-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CVS42_RS11755 a86a0bcaf2312933e5d720afeab9e2a2 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.854 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CVS42_RS11755 a86a0bcaf2312933e5d720afeab9e2a2 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 280 1.4E-67 T 29-03-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CVS42_RS11755 a86a0bcaf2312933e5d720afeab9e2a2 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 29-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CVS42_RS11755 a86a0bcaf2312933e5d720afeab9e2a2 284 SUPERFAMILY SSF53223 1 122 1.73E-41 T 29-03-2018 CVS42_RS11755 a86a0bcaf2312933e5d720afeab9e2a2 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 2.4E-41 T 29-03-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CVS42_RS11755 a86a0bcaf2312933e5d720afeab9e2a2 284 Gene3D G3DSA:3.40.50.10860 11 140 3.4E-51 T 29-03-2018 CVS42_RS00240 ed619c6926164e81777024ba719bf6b9 219 SUPERFAMILY SSF51161 44 216 4.3E-44 T 29-03-2018 IPR011004 Trimeric LpxA-like CVS42_RS00240 ed619c6926164e81777024ba719bf6b9 219 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 154 6.0E-9 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS00240 ed619c6926164e81777024ba719bf6b9 219 Gene3D G3DSA:2.160.10.10 1 219 9.2E-43 T 29-03-2018 CVS42_RS00240 ed619c6926164e81777024ba719bf6b9 219 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 128 156 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CVS42_RS18035 a33db988049c84442f4dc49b2e0309c3 424 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 8.7E-24 T 29-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CVS42_RS18035 a33db988049c84442f4dc49b2e0309c3 424 Pfam PF07670 Nucleoside recognition 99 195 1.6E-8 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CVS42_RS18035 a33db988049c84442f4dc49b2e0309c3 424 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 418 6.7E-74 T 29-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CVS42_RS18035 a33db988049c84442f4dc49b2e0309c3 424 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 418 2.9E-151 T 29-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CVS42_RS05720 bb0d122c0b5ba29ce00e55e22b4a36f2 87 Gene3D G3DSA:3.30.60.20 15 25 0.18 T 29-03-2018 CVS42_RS05720 bb0d122c0b5ba29ce00e55e22b4a36f2 87 Gene3D G3DSA:3.30.60.20 76 87 0.32 T 29-03-2018 CVS42_RS17395 22d19e35cdbb8375ea1a02be081323d3 246 SUPERFAMILY SSF55021 70 152 6.7E-16 T 29-03-2018 CVS42_RS17395 22d19e35cdbb8375ea1a02be081323d3 246 SUPERFAMILY SSF55021 166 235 3.17E-8 T 29-03-2018 CVS42_RS17395 22d19e35cdbb8375ea1a02be081323d3 246 Gene3D G3DSA:3.30.70.260 156 246 5.4E-11 T 29-03-2018 CVS42_RS17395 22d19e35cdbb8375ea1a02be081323d3 246 Pfam PF13740 ACT domain 72 147 5.3E-24 T 29-03-2018 CVS42_RS17395 22d19e35cdbb8375ea1a02be081323d3 246 Gene3D G3DSA:3.30.70.260 73 152 1.6E-9 T 29-03-2018 CVS42_RS02080 cc1c1c2d49e301761ca07916592ac919 464 Pfam PF03929 PepSY-associated TM region 13 403 1.2E-70 T 29-03-2018 IPR005625 PepSY-associated TM protein CVS42_RS02080 cc1c1c2d49e301761ca07916592ac919 464 Gene3D G3DSA:1.20.950.20 147 272 9.5E-5 T 29-03-2018 CVS42_RS02080 cc1c1c2d49e301761ca07916592ac919 464 Pfam PF03413 Peptidase propeptide and YPEB domain 292 348 4.3E-6 T 29-03-2018 IPR025711 PepSY domain CVS42_RS17435 e9ca69f630f329a21398e3fd50c39a51 465 Pfam PF00854 POT family 233 410 3.7E-33 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CVS42_RS17435 e9ca69f630f329a21398e3fd50c39a51 465 Pfam PF00854 POT family 87 199 1.1E-30 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CVS42_RS17435 e9ca69f630f329a21398e3fd50c39a51 465 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 155 167 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CVS42_RS17435 e9ca69f630f329a21398e3fd50c39a51 465 Gene3D G3DSA:1.20.1250.20 7 206 7.4E-25 T 29-03-2018 CVS42_RS17435 e9ca69f630f329a21398e3fd50c39a51 465 SUPERFAMILY SSF103473 6 438 3.27E-41 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS17435 e9ca69f630f329a21398e3fd50c39a51 465 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 75 99 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CVS42_RS17435 e9ca69f630f329a21398e3fd50c39a51 465 Gene3D G3DSA:1.20.1250.20 218 463 4.3E-19 T 29-03-2018 CVS42_RS17435 e9ca69f630f329a21398e3fd50c39a51 465 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 8 213 2.3E-58 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CVS42_RS17435 e9ca69f630f329a21398e3fd50c39a51 465 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 223 439 9.3E-48 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CVS42_RS02235 a4dbd56b0f7499116c91b861bafc51e3 250 SUPERFAMILY SSF51735 9 236 2.16E-68 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS02235 a4dbd56b0f7499116c91b861bafc51e3 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 236 8.2E-54 T 29-03-2018 CVS42_RS02235 a4dbd56b0f7499116c91b861bafc51e3 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 1.5E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02235 a4dbd56b0f7499116c91b861bafc51e3 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.5E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02235 a4dbd56b0f7499116c91b861bafc51e3 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 1.5E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02235 a4dbd56b0f7499116c91b861bafc51e3 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CVS42_RS02235 a4dbd56b0f7499116c91b861bafc51e3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 3.7E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02235 a4dbd56b0f7499116c91b861bafc51e3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 3.7E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02235 a4dbd56b0f7499116c91b861bafc51e3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 3.7E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02235 a4dbd56b0f7499116c91b861bafc51e3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 3.7E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02235 a4dbd56b0f7499116c91b861bafc51e3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.7E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02235 a4dbd56b0f7499116c91b861bafc51e3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 3.7E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02235 a4dbd56b0f7499116c91b861bafc51e3 250 Gene3D G3DSA:3.40.50.720 3 237 1.2E-63 T 29-03-2018 CVS42_RS13550 5b738035b8adf7d73dd1bfc93321c646 447 SUPERFAMILY SSF54631 130 267 2.2E-22 T 29-03-2018 CVS42_RS13550 5b738035b8adf7d73dd1bfc93321c646 447 SUPERFAMILY SSF161093 273 443 1.12E-46 T 29-03-2018 CVS42_RS13550 5b738035b8adf7d73dd1bfc93321c646 447 SUPERFAMILY SSF158791 25 122 1.1E-8 T 29-03-2018 CVS42_RS13550 5b738035b8adf7d73dd1bfc93321c646 447 Gene3D G3DSA:3.10.580.10 121 257 8.2E-16 T 29-03-2018 CVS42_RS13550 5b738035b8adf7d73dd1bfc93321c646 447 Pfam PF00571 CBS domain 134 188 8.3E-6 T 29-03-2018 IPR000644 CBS domain CVS42_RS13550 5b738035b8adf7d73dd1bfc93321c646 447 Pfam PF00571 CBS domain 194 246 0.0031 T 29-03-2018 IPR000644 CBS domain CVS42_RS13550 5b738035b8adf7d73dd1bfc93321c646 447 Pfam PF01769 Divalent cation transporter 315 436 8.4E-26 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CVS42_RS13550 5b738035b8adf7d73dd1bfc93321c646 447 SMART SM00924 27 130 3.6E-11 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CVS42_RS13550 5b738035b8adf7d73dd1bfc93321c646 447 TIGRFAM TIGR00400 mgtE: magnesium transporter 26 443 2.3E-79 T 29-03-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 CVS42_RS13550 5b738035b8adf7d73dd1bfc93321c646 447 Gene3D G3DSA:1.10.357.20 271 446 4.3E-40 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CVS42_RS13550 5b738035b8adf7d73dd1bfc93321c646 447 Gene3D G3DSA:1.25.60.10 11 120 6.7E-5 T 29-03-2018 CVS42_RS13550 5b738035b8adf7d73dd1bfc93321c646 447 Pfam PF03448 MgtE intracellular N domain 28 127 4.8E-6 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CVS42_RS13550 5b738035b8adf7d73dd1bfc93321c646 447 SMART SM00116 201 248 0.0028 T 29-03-2018 IPR000644 CBS domain CVS42_RS13550 5b738035b8adf7d73dd1bfc93321c646 447 SMART SM00116 137 190 20.0 T 29-03-2018 IPR000644 CBS domain CVS42_RS20380 ef2bdb5ac317e2b040a2d92854cc5fa1 219 Gene3D G3DSA:3.40.1050.10 2 209 7.9E-73 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CVS42_RS20380 ef2bdb5ac317e2b040a2d92854cc5fa1 219 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CVS42_RS20380 ef2bdb5ac317e2b040a2d92854cc5fa1 219 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CVS42_RS20380 ef2bdb5ac317e2b040a2d92854cc5fa1 219 SUPERFAMILY SSF53056 3 204 5.36E-78 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CVS42_RS20380 ef2bdb5ac317e2b040a2d92854cc5fa1 219 SMART SM00947 30 193 2.6E-74 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CVS42_RS20380 ef2bdb5ac317e2b040a2d92854cc5fa1 219 Pfam PF00484 Carbonic anhydrase 37 188 9.1E-55 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CVS42_RS17855 d82d07a3063fe94be7139642aea1c2d0 484 SUPERFAMILY SSF53300 320 456 5.93E-18 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS17855 d82d07a3063fe94be7139642aea1c2d0 484 SMART SM00327 320 483 6.2E-5 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS17855 d82d07a3063fe94be7139642aea1c2d0 484 Gene3D G3DSA:3.40.50.410 296 469 7.8E-17 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS17855 d82d07a3063fe94be7139642aea1c2d0 484 Pfam PF05762 VWA domain containing CoxE-like protein 321 451 2.6E-12 T 29-03-2018 IPR008912 Uncharacterised protein family CoxE-like CVS42_RS19535 11b37c717d804ce84c6ce8a7b271cfdd 486 SUPERFAMILY SSF53756 5 484 6.28E-120 T 29-03-2018 CVS42_RS19535 11b37c717d804ce84c6ce8a7b271cfdd 486 Pfam PF00534 Glycosyl transferases group 1 298 443 6.0E-16 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CVS42_RS19535 11b37c717d804ce84c6ce8a7b271cfdd 486 Gene3D G3DSA:3.40.50.2000 3 263 2.1E-4 T 29-03-2018 CVS42_RS19535 11b37c717d804ce84c6ce8a7b271cfdd 486 Gene3D G3DSA:3.40.50.2000 264 478 1.3E-37 T 29-03-2018 CVS42_RS19535 11b37c717d804ce84c6ce8a7b271cfdd 486 Pfam PF08323 Starch synthase catalytic domain 7 244 7.6E-77 T 29-03-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CVS42_RS19535 11b37c717d804ce84c6ce8a7b271cfdd 486 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 481 9.9E-160 T 29-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CVS42_RS19535 11b37c717d804ce84c6ce8a7b271cfdd 486 Hamap MF_00484 Glycogen synthase [glgA]. 6 482 40.294 T 29-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CVS42_RS13965 eabab40e56d982240e9a20be4ac68461 234 Pfam PF04397 LytTr DNA-binding domain 139 231 2.4E-20 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CVS42_RS13965 eabab40e56d982240e9a20be4ac68461 234 Gene3D G3DSA:3.40.50.2300 1 126 1.2E-28 T 29-03-2018 CVS42_RS13965 eabab40e56d982240e9a20be4ac68461 234 SMART SM00448 2 110 4.3E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS13965 eabab40e56d982240e9a20be4ac68461 234 Gene3D G3DSA:2.20.25.10 196 232 1.8E-5 T 29-03-2018 CVS42_RS13965 eabab40e56d982240e9a20be4ac68461 234 Gene3D G3DSA:2.40.50.40 130 194 1.4E-4 T 29-03-2018 CVS42_RS13965 eabab40e56d982240e9a20be4ac68461 234 SMART SM00850 138 232 4.4E-25 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CVS42_RS13965 eabab40e56d982240e9a20be4ac68461 234 Pfam PF00072 Response regulator receiver domain 5 110 1.8E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS13965 eabab40e56d982240e9a20be4ac68461 234 SUPERFAMILY SSF52172 1 115 2.85E-30 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS09675 03838d06d3a9d8652928eb458d709f5c 291 Pfam PF13407 Periplasmic binding protein domain 27 276 2.9E-57 T 29-03-2018 IPR025997 Periplasmic binding protein CVS42_RS09675 03838d06d3a9d8652928eb458d709f5c 291 Gene3D G3DSA:3.40.50.2300 24 128 5.0E-26 T 29-03-2018 CVS42_RS09675 03838d06d3a9d8652928eb458d709f5c 291 SUPERFAMILY SSF53822 25 290 3.33E-82 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CVS42_RS09675 03838d06d3a9d8652928eb458d709f5c 291 Gene3D G3DSA:3.40.50.2300 129 291 1.5E-40 T 29-03-2018 CVS42_RS05965 e288f2a5c4d91c8a7b5ad3d430a653a8 246 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 244 50.479 T 29-03-2018 IPR023710 Probable phosphatase YcdX GO:0008270 CVS42_RS05965 e288f2a5c4d91c8a7b5ad3d430a653a8 246 Gene3D G3DSA:3.20.20.140 7 231 1.2E-36 T 29-03-2018 CVS42_RS05965 e288f2a5c4d91c8a7b5ad3d430a653a8 246 SUPERFAMILY SSF89550 4 243 3.01E-60 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CVS42_RS05965 e288f2a5c4d91c8a7b5ad3d430a653a8 246 SMART SM00481 5 79 2.2E-11 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CVS42_RS20975 ca22bf75b19529d296f9b6b5bb209e49 308 SUPERFAMILY SSF53633 5 300 1.06E-77 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS20975 ca22bf75b19529d296f9b6b5bb209e49 308 PRINTS PR01469 Bacterial carbamate kinase signature 105 124 5.1E-62 T 29-03-2018 CVS42_RS20975 ca22bf75b19529d296f9b6b5bb209e49 308 PRINTS PR01469 Bacterial carbamate kinase signature 176 194 5.1E-62 T 29-03-2018 CVS42_RS20975 ca22bf75b19529d296f9b6b5bb209e49 308 PRINTS PR01469 Bacterial carbamate kinase signature 206 221 5.1E-62 T 29-03-2018 CVS42_RS20975 ca22bf75b19529d296f9b6b5bb209e49 308 PRINTS PR01469 Bacterial carbamate kinase signature 257 272 5.1E-62 T 29-03-2018 CVS42_RS20975 ca22bf75b19529d296f9b6b5bb209e49 308 PRINTS PR01469 Bacterial carbamate kinase signature 44 63 5.1E-62 T 29-03-2018 CVS42_RS20975 ca22bf75b19529d296f9b6b5bb209e49 308 PRINTS PR01469 Bacterial carbamate kinase signature 74 92 5.1E-62 T 29-03-2018 CVS42_RS20975 ca22bf75b19529d296f9b6b5bb209e49 308 PRINTS PR01469 Bacterial carbamate kinase signature 153 172 5.1E-62 T 29-03-2018 CVS42_RS20975 ca22bf75b19529d296f9b6b5bb209e49 308 Pfam PF00696 Amino acid kinase family 5 275 5.0E-27 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS20975 ca22bf75b19529d296f9b6b5bb209e49 308 Gene3D G3DSA:3.40.1160.10 1 302 9.0E-47 T 29-03-2018 CVS42_RS20975 ca22bf75b19529d296f9b6b5bb209e49 308 PIRSF PIRSF000723 2 302 1.5E-112 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CVS42_RS20975 ca22bf75b19529d296f9b6b5bb209e49 308 TIGRFAM TIGR00746 arcC: carbamate kinase 5 301 2.1E-119 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CVS42_RS10075 742225c96e88092994bfe80017caaa74 213 ProSitePatterns PS01331 Thymidylate kinase signature. 93 105 - T 29-03-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CVS42_RS10075 742225c96e88092994bfe80017caaa74 213 Gene3D G3DSA:3.40.50.300 1 208 1.5E-47 T 29-03-2018 CVS42_RS10075 742225c96e88092994bfe80017caaa74 213 Pfam PF02223 Thymidylate kinase 7 196 8.4E-55 T 29-03-2018 CVS42_RS10075 742225c96e88092994bfe80017caaa74 213 Hamap MF_00165 Thymidylate kinase [tmk]. 3 204 27.673 T 29-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CVS42_RS10075 742225c96e88092994bfe80017caaa74 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 196 1.2E-60 T 29-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CVS42_RS10075 742225c96e88092994bfe80017caaa74 213 SUPERFAMILY SSF52540 1 206 1.68E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS08580 81bf87ea9f0af7e55b0d25fb5228a614 428 PIRSF PIRSF001369 38 428 1.1E-168 T 29-03-2018 IPR024176 Citrate synthase, bacterial-type CVS42_RS08580 81bf87ea9f0af7e55b0d25fb5228a614 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 421 1.7E-232 T 29-03-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 CVS42_RS08580 81bf87ea9f0af7e55b0d25fb5228a614 428 SUPERFAMILY SSF48256 6 428 6.41E-168 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CVS42_RS08580 81bf87ea9f0af7e55b0d25fb5228a614 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 29-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CVS42_RS08580 81bf87ea9f0af7e55b0d25fb5228a614 428 Gene3D G3DSA:1.10.580.10 53 302 2.0E-89 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain CVS42_RS08580 81bf87ea9f0af7e55b0d25fb5228a614 428 Pfam PF00285 Citrate synthase, C-terminal domain 46 411 7.6E-133 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CVS42_RS08580 81bf87ea9f0af7e55b0d25fb5228a614 428 PRINTS PR00143 Citrate synthase signature 165 178 2.0E-55 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CVS42_RS08580 81bf87ea9f0af7e55b0d25fb5228a614 428 PRINTS PR00143 Citrate synthase signature 241 269 2.0E-55 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CVS42_RS08580 81bf87ea9f0af7e55b0d25fb5228a614 428 PRINTS PR00143 Citrate synthase signature 359 375 2.0E-55 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CVS42_RS08580 81bf87ea9f0af7e55b0d25fb5228a614 428 PRINTS PR00143 Citrate synthase signature 379 393 2.0E-55 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CVS42_RS08580 81bf87ea9f0af7e55b0d25fb5228a614 428 PRINTS PR00143 Citrate synthase signature 296 316 2.0E-55 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CVS42_RS08580 81bf87ea9f0af7e55b0d25fb5228a614 428 PRINTS PR00143 Citrate synthase signature 219 234 2.0E-55 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CVS42_RS08580 81bf87ea9f0af7e55b0d25fb5228a614 428 Gene3D G3DSA:1.10.580.10 338 403 4.0E-9 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 173 727 1.1E-134 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 SUPERFAMILY SSF51621 421 719 1.57E-95 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 SUPERFAMILY SSF52009 295 414 9.68E-25 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 Pfam PF01590 GAF domain 18 153 1.7E-15 T 29-03-2018 IPR003018 GAF domain GO:0005515 CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 Gene3D G3DSA:1.10.274.10 197 308 8.8E-28 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 Pfam PF00391 PEP-utilising enzyme, mobile domain 323 393 6.3E-14 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 Gene3D G3DSA:3.20.20.60 423 744 7.8E-88 T 29-03-2018 CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 SUPERFAMILY SSF55781 2 158 8.51E-30 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 618 633 9.4E-23 T 29-03-2018 CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 461 480 9.4E-23 T 29-03-2018 CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 635 650 9.4E-23 T 29-03-2018 CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 671 683 9.4E-23 T 29-03-2018 CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 Gene3D G3DSA:3.30.450.40 1 165 3.5E-31 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 SMART SM00065 17 164 1.5E-22 T 29-03-2018 IPR003018 GAF domain GO:0005515 CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 353 364 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 Pfam PF05524 PEP-utilising enzyme, N-terminal 173 296 4.3E-23 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 423 711 1.5E-96 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 Gene3D G3DSA:3.50.30.10 309 422 2.5E-16 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CVS42_RS18195 bee2940758c220e68fac8181394f56f4 759 SUPERFAMILY SSF47831 199 311 4.97E-27 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CVS42_RS14435 eca70680954ec5f3e66df82eb4cd1a0d 296 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 1 296 54.822 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CVS42_RS14435 eca70680954ec5f3e66df82eb4cd1a0d 296 PIRSF PIRSF002936 1 296 3.4E-150 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CVS42_RS14435 eca70680954ec5f3e66df82eb4cd1a0d 296 SUPERFAMILY SSF52402 2 204 1.02E-70 T 29-03-2018 CVS42_RS14435 eca70680954ec5f3e66df82eb4cd1a0d 296 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 5 296 3.7E-157 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CVS42_RS14435 eca70680954ec5f3e66df82eb4cd1a0d 296 Gene3D G3DSA:3.40.50.620 1 294 1.8E-42 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS14435 eca70680954ec5f3e66df82eb4cd1a0d 296 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 24 251 2.1E-65 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CVS42_RS21865 efab358d8a39cb6dfd2e27f2be90757d 277 SUPERFAMILY SSF144091 96 272 7.46E-38 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CVS42_RS21865 efab358d8a39cb6dfd2e27f2be90757d 277 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 83 8.9E-28 T 29-03-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 CVS42_RS21865 efab358d8a39cb6dfd2e27f2be90757d 277 Gene3D G3DSA:1.20.1540.10 94 273 9.5E-32 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CVS42_RS21865 efab358d8a39cb6dfd2e27f2be90757d 277 Pfam PF01694 Rhomboid family 135 273 7.5E-29 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CVS42_RS21865 efab358d8a39cb6dfd2e27f2be90757d 277 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 273 3.0E-110 T 29-03-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 CVS42_RS07770 3ca2b2afedb2eab0fab0c1a2d9489942 266 Gene3D G3DSA:3.30.70.1070 184 265 1.5E-10 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CVS42_RS07770 3ca2b2afedb2eab0fab0c1a2d9489942 266 Pfam PF05036 Sporulation related domain 187 262 5.5E-13 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CVS42_RS07770 3ca2b2afedb2eab0fab0c1a2d9489942 266 SUPERFAMILY SSF110997 187 264 3.53E-14 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CVS42_RS10315 115db2655b0dd4fb7d8e1a60c0504e9a 436 PIRSF PIRSF000429 9 436 5.9E-118 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CVS42_RS10315 115db2655b0dd4fb7d8e1a60c0504e9a 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CVS42_RS10315 115db2655b0dd4fb7d8e1a60c0504e9a 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 69.762 T 29-03-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CVS42_RS10315 115db2655b0dd4fb7d8e1a60c0504e9a 436 Gene3D G3DSA:3.40.47.10 296 433 4.1E-24 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS10315 115db2655b0dd4fb7d8e1a60c0504e9a 436 Pfam PF00108 Thiolase, N-terminal domain 15 287 1.2E-60 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CVS42_RS10315 115db2655b0dd4fb7d8e1a60c0504e9a 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CVS42_RS10315 115db2655b0dd4fb7d8e1a60c0504e9a 436 SUPERFAMILY SSF53901 13 292 3.84E-61 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS10315 115db2655b0dd4fb7d8e1a60c0504e9a 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 6.7E-131 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CVS42_RS10315 115db2655b0dd4fb7d8e1a60c0504e9a 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 6.5E-36 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CVS42_RS10315 115db2655b0dd4fb7d8e1a60c0504e9a 436 Gene3D G3DSA:3.40.47.10 12 295 2.2E-45 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS10315 115db2655b0dd4fb7d8e1a60c0504e9a 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 2.9E-256 T 29-03-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CVS42_RS10315 115db2655b0dd4fb7d8e1a60c0504e9a 436 SUPERFAMILY SSF53901 296 435 1.18E-32 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS14430 e0ebe1e2de834cbba50f83c7ecbe2bd4 468 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 78 93 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CVS42_RS14430 e0ebe1e2de834cbba50f83c7ecbe2bd4 468 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 23 427 1.3E-191 T 29-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CVS42_RS14430 e0ebe1e2de834cbba50f83c7ecbe2bd4 468 Gene3D G3DSA:3.40.50.300 2 233 2.4E-40 T 29-03-2018 CVS42_RS14430 e0ebe1e2de834cbba50f83c7ecbe2bd4 468 SUPERFAMILY SSF50465 328 428 2.11E-28 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CVS42_RS14430 e0ebe1e2de834cbba50f83c7ecbe2bd4 468 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 14 468 50.602 T 29-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CVS42_RS14430 e0ebe1e2de834cbba50f83c7ecbe2bd4 468 SUPERFAMILY SSF50447 234 321 1.43E-24 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CVS42_RS14430 e0ebe1e2de834cbba50f83c7ecbe2bd4 468 Pfam PF00009 Elongation factor Tu GTP binding domain 22 221 2.2E-42 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS14430 e0ebe1e2de834cbba50f83c7ecbe2bd4 468 SUPERFAMILY SSF52540 18 230 5.02E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS14430 e0ebe1e2de834cbba50f83c7ecbe2bd4 468 Gene3D G3DSA:2.40.30.10 325 429 1.4E-20 T 29-03-2018 CVS42_RS14430 e0ebe1e2de834cbba50f83c7ecbe2bd4 468 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 29 207 9.3E-13 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CVS42_RS14430 e0ebe1e2de834cbba50f83c7ecbe2bd4 468 Gene3D G3DSA:2.40.30.10 234 322 2.6E-23 T 29-03-2018 CVS42_RS14430 e0ebe1e2de834cbba50f83c7ecbe2bd4 468 PRINTS PR00315 GTP-binding elongation factor signature 158 167 7.6E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS14430 e0ebe1e2de834cbba50f83c7ecbe2bd4 468 PRINTS PR00315 GTP-binding elongation factor signature 85 93 7.6E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS14430 e0ebe1e2de834cbba50f83c7ecbe2bd4 468 PRINTS PR00315 GTP-binding elongation factor signature 24 37 7.6E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS14430 e0ebe1e2de834cbba50f83c7ecbe2bd4 468 PRINTS PR00315 GTP-binding elongation factor signature 105 115 7.6E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS14430 e0ebe1e2de834cbba50f83c7ecbe2bd4 468 PRINTS PR00315 GTP-binding elongation factor signature 121 132 7.6E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CVS42_RS20320 a88f07236d100d05345354c11ccf3b26 215 Gene3D G3DSA:3.30.70.60 111 211 1.1E-11 T 29-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CVS42_RS06670 ed99bb486f20aa9c73b8f4c04b28f37b 323 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 17 313 55.512 T 29-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 CVS42_RS06670 ed99bb486f20aa9c73b8f4c04b28f37b 323 SUPERFAMILY SSF53335 56 310 6.51E-32 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS06670 ed99bb486f20aa9c73b8f4c04b28f37b 323 Gene3D G3DSA:3.40.50.150 50 311 2.3E-55 T 29-03-2018 CVS42_RS06670 ed99bb486f20aa9c73b8f4c04b28f37b 323 PIRSF PIRSF029038 10 323 4.8E-142 T 29-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 CVS42_RS06670 ed99bb486f20aa9c73b8f4c04b28f37b 323 Pfam PF05971 Protein of unknown function (DUF890) 16 311 2.6E-128 T 29-03-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 CVS42_RS03690 3368a203ff0b94ae74e1b25ba612091e 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 15 357 6.9E-112 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CVS42_RS03690 3368a203ff0b94ae74e1b25ba612091e 359 PIRSF PIRSF001359 14 359 3.8E-97 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CVS42_RS03690 3368a203ff0b94ae74e1b25ba612091e 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CVS42_RS03690 3368a203ff0b94ae74e1b25ba612091e 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 5 358 7.5E-184 T 29-03-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 CVS42_RS03690 3368a203ff0b94ae74e1b25ba612091e 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 18 355 2.6E-88 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CVS42_RS03690 3368a203ff0b94ae74e1b25ba612091e 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CVS42_RS03690 3368a203ff0b94ae74e1b25ba612091e 359 SUPERFAMILY SSF51569 5 357 4.03E-129 T 29-03-2018 CVS42_RS03690 3368a203ff0b94ae74e1b25ba612091e 359 Gene3D G3DSA:3.20.20.70 5 358 2.1E-99 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS12245 0e82574643d844ae951133e52fdc8283 408 SMART SM00487 1 206 3.4E-54 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS12245 0e82574643d844ae951133e52fdc8283 408 SUPERFAMILY SSF52540 51 335 1.28E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS12245 0e82574643d844ae951133e52fdc8283 408 Pfam PF00270 DEAD/DEAH box helicase 2 173 7.6E-51 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CVS42_RS12245 0e82574643d844ae951133e52fdc8283 408 Gene3D G3DSA:3.40.50.300 200 408 6.3E-45 T 29-03-2018 CVS42_RS12245 0e82574643d844ae951133e52fdc8283 408 SMART SM00490 235 316 1.4E-31 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS12245 0e82574643d844ae951133e52fdc8283 408 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 130 138 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CVS42_RS12245 0e82574643d844ae951133e52fdc8283 408 Gene3D G3DSA:3.40.50.300 1 199 8.2E-61 T 29-03-2018 CVS42_RS12245 0e82574643d844ae951133e52fdc8283 408 Pfam PF00271 Helicase conserved C-terminal domain 209 316 1.1E-28 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS18985 e892781bcb8a39f85b4e38eebe82890b 137 Pfam PF02050 Flagellar FliJ protein 19 131 4.9E-9 T 29-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CVS42_RS02315 efd9b5126c47906c3e6864fa82744d79 296 Gene3D G3DSA:1.10.10.10 4 81 4.2E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02315 efd9b5126c47906c3e6864fa82744d79 296 Pfam PF03466 LysR substrate binding domain 87 287 1.4E-22 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS02315 efd9b5126c47906c3e6864fa82744d79 296 SUPERFAMILY SSF53850 92 292 5.61E-25 T 29-03-2018 CVS42_RS02315 efd9b5126c47906c3e6864fa82744d79 296 Gene3D G3DSA:3.40.190.10 170 260 8.0E-12 T 29-03-2018 CVS42_RS02315 efd9b5126c47906c3e6864fa82744d79 296 SUPERFAMILY SSF46785 2 84 1.92E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02315 efd9b5126c47906c3e6864fa82744d79 296 Gene3D G3DSA:3.40.190.10 82 169 3.7E-11 T 29-03-2018 CVS42_RS02315 efd9b5126c47906c3e6864fa82744d79 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS02315 efd9b5126c47906c3e6864fa82744d79 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS02315 efd9b5126c47906c3e6864fa82744d79 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS02315 efd9b5126c47906c3e6864fa82744d79 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 6.5E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS18630 eba4b7e6f0e8ede96ba586d6dd4ad2a0 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 14 25 1.1E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS18630 eba4b7e6f0e8ede96ba586d6dd4ad2a0 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 158 178 1.1E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS18630 eba4b7e6f0e8ede96ba586d6dd4ad2a0 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 109 122 1.1E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS18630 eba4b7e6f0e8ede96ba586d6dd4ad2a0 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 140 156 1.1E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS18630 eba4b7e6f0e8ede96ba586d6dd4ad2a0 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 193 1.5E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS18630 eba4b7e6f0e8ede96ba586d6dd4ad2a0 226 Pfam PF00702 haloacid dehalogenase-like hydrolase 14 188 7.4E-11 T 29-03-2018 CVS42_RS18630 eba4b7e6f0e8ede96ba586d6dd4ad2a0 226 SUPERFAMILY SSF56784 10 221 6.27E-45 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS18630 eba4b7e6f0e8ede96ba586d6dd4ad2a0 226 Gene3D G3DSA:3.40.50.1000 2 212 9.9E-27 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS00165 847d22838f3e0413d78eb66a2a5bf3b1 377 Pfam PF00529 HlyD membrane-fusion protein of T1SS 62 347 7.2E-7 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CVS42_RS00165 847d22838f3e0413d78eb66a2a5bf3b1 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 269 8.4E-31 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CVS42_RS00165 847d22838f3e0413d78eb66a2a5bf3b1 377 Gene3D G3DSA:1.20.1600.10 93 275 2.8E-29 T 29-03-2018 CVS42_RS00165 847d22838f3e0413d78eb66a2a5bf3b1 377 SUPERFAMILY SSF111369 57 273 1.96E-39 T 29-03-2018 CVS42_RS00165 847d22838f3e0413d78eb66a2a5bf3b1 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 362 1.3E-74 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CVS42_RS18305 8878614335df6b2abf6d87255b57382e 541 SUPERFAMILY SSF161098 281 534 1.12E-36 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS18305 8878614335df6b2abf6d87255b57382e 541 Gene3D G3DSA:1.10.3720.10 316 537 1.2E-21 T 29-03-2018 CVS42_RS18305 8878614335df6b2abf6d87255b57382e 541 Gene3D G3DSA:1.10.3720.10 37 264 8.5E-30 T 29-03-2018 CVS42_RS18305 8878614335df6b2abf6d87255b57382e 541 SUPERFAMILY SSF161098 6 257 1.59E-42 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS18305 8878614335df6b2abf6d87255b57382e 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 66 250 8.5E-11 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS19180 d6aac095e870ee959f804ad0fb999a84 634 Pfam PF05043 Mga helix-turn-helix domain 98 166 3.3E-7 T 29-03-2018 IPR007737 Mga helix-turn-helix domain CVS42_RS19180 d6aac095e870ee959f804ad0fb999a84 634 Gene3D G3DSA:3.40.930.10 490 632 1.3E-18 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CVS42_RS19180 d6aac095e870ee959f804ad0fb999a84 634 Gene3D G3DSA:1.10.10.10 1 69 1.2E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS19180 d6aac095e870ee959f804ad0fb999a84 634 Gene3D G3DSA:1.10.10.10 87 154 1.9E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS19180 d6aac095e870ee959f804ad0fb999a84 634 Gene3D G3DSA:1.10.1790.10 288 392 1.3E-17 T 29-03-2018 IPR011608 PRD domain GO:0006355 CVS42_RS19180 d6aac095e870ee959f804ad0fb999a84 634 Pfam PF08279 HTH domain 8 64 1.2E-10 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 CVS42_RS19180 d6aac095e870ee959f804ad0fb999a84 634 Pfam PF00874 PRD domain 299 386 2.9E-15 T 29-03-2018 IPR011608 PRD domain GO:0006355 CVS42_RS19180 d6aac095e870ee959f804ad0fb999a84 634 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 501 627 1.1E-16 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CVS42_RS19180 d6aac095e870ee959f804ad0fb999a84 634 SUPERFAMILY SSF63520 292 391 7.19E-18 T 29-03-2018 IPR011608 PRD domain GO:0006355 CVS42_RS19180 d6aac095e870ee959f804ad0fb999a84 634 Gene3D G3DSA:3.40.50.2300 398 483 8.3E-10 T 29-03-2018 CVS42_RS19180 d6aac095e870ee959f804ad0fb999a84 634 SUPERFAMILY SSF46785 5 65 9.98E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS19180 d6aac095e870ee959f804ad0fb999a84 634 SUPERFAMILY SSF55804 490 628 1.92E-23 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CVS42_RS15730 0b9cf65642f0da2bd535fb3289d57ced 214 Gene3D G3DSA:1.10.10.10 122 214 2.9E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS15730 0b9cf65642f0da2bd535fb3289d57ced 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 1.2E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS15730 0b9cf65642f0da2bd535fb3289d57ced 214 SUPERFAMILY SSF46894 143 211 1.43E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS15730 0b9cf65642f0da2bd535fb3289d57ced 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS15730 0b9cf65642f0da2bd535fb3289d57ced 214 SUPERFAMILY SSF52172 5 131 1.99E-26 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS15730 0b9cf65642f0da2bd535fb3289d57ced 214 SMART SM00421 149 206 4.2E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS15730 0b9cf65642f0da2bd535fb3289d57ced 214 Pfam PF00072 Response regulator receiver domain 7 120 8.1E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS15730 0b9cf65642f0da2bd535fb3289d57ced 214 Gene3D G3DSA:3.40.50.2300 1 121 3.4E-26 T 29-03-2018 CVS42_RS15730 0b9cf65642f0da2bd535fb3289d57ced 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 4.9E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS15730 0b9cf65642f0da2bd535fb3289d57ced 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 4.9E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS15730 0b9cf65642f0da2bd535fb3289d57ced 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 4.9E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS15730 0b9cf65642f0da2bd535fb3289d57ced 214 SMART SM00448 5 119 1.0E-20 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS19280 c0f5dda1ba9a181fc2d1108009acd4db 260 SUPERFAMILY SSF52317 34 256 5.42E-41 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS19280 c0f5dda1ba9a181fc2d1108009acd4db 260 Pfam PF07722 Peptidase C26 12 230 2.4E-66 T 29-03-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 CVS42_RS19280 c0f5dda1ba9a181fc2d1108009acd4db 260 Gene3D G3DSA:3.40.50.880 9 259 2.9E-41 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS05415 f93cce5d582d26feb68094f3c9255345 139 SUPERFAMILY SSF55729 1 125 1.89E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS05415 f93cce5d582d26feb68094f3c9255345 139 Pfam PF13673 Acetyltransferase (GNAT) domain 38 124 3.0E-18 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS05415 f93cce5d582d26feb68094f3c9255345 139 Gene3D G3DSA:3.40.630.30 76 131 4.8E-10 T 29-03-2018 CVS42_RS05415 f93cce5d582d26feb68094f3c9255345 139 Gene3D G3DSA:3.40.630.30 1 75 1.1E-16 T 29-03-2018 CVS42_RS12130 9f62500426de5abf18cd1d3648dcfd85 180 Gene3D G3DSA:3.30.70.20 106 147 2.1E-7 T 29-03-2018 CVS42_RS12130 9f62500426de5abf18cd1d3648dcfd85 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS12130 9f62500426de5abf18cd1d3648dcfd85 180 Gene3D G3DSA:3.30.70.20 34 70 2.2E-6 T 29-03-2018 CVS42_RS12130 9f62500426de5abf18cd1d3648dcfd85 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS12130 9f62500426de5abf18cd1d3648dcfd85 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 2 152 27.362 T 29-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12130 9f62500426de5abf18cd1d3648dcfd85 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 2.7E-50 T 29-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12130 9f62500426de5abf18cd1d3648dcfd85 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 3.6E-12 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS12130 9f62500426de5abf18cd1d3648dcfd85 180 Gene3D G3DSA:3.30.70.20 71 105 5.1E-15 T 29-03-2018 CVS42_RS12130 9f62500426de5abf18cd1d3648dcfd85 180 SUPERFAMILY SSF54862 33 154 9.21E-28 T 29-03-2018 CVS42_RS16110 088e6b6357ddca32a30bbcf099e0334b 257 Pfam PF00849 RNA pseudouridylate synthase 23 183 5.4E-34 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS16110 088e6b6357ddca32a30bbcf099e0334b 257 Gene3D G3DSA:3.30.2350.10 14 250 1.6E-60 T 29-03-2018 CVS42_RS16110 088e6b6357ddca32a30bbcf099e0334b 257 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS16110 088e6b6357ddca32a30bbcf099e0334b 257 SUPERFAMILY SSF55120 11 252 2.24E-60 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS12600 5f8c10949abdd697cec00d4afb2032b7 471 Gene3D G3DSA:3.40.640.10 146 353 5.5E-46 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS12600 5f8c10949abdd697cec00d4afb2032b7 471 Gene3D G3DSA:1.10.10.10 1 68 3.8E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS12600 5f8c10949abdd697cec00d4afb2032b7 471 Gene3D G3DSA:3.90.1150.10 354 468 7.4E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS12600 5f8c10949abdd697cec00d4afb2032b7 471 Pfam PF00155 Aminotransferase class I and II 146 460 8.6E-33 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CVS42_RS12600 5f8c10949abdd697cec00d4afb2032b7 471 SMART SM00345 7 66 6.9E-13 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS12600 5f8c10949abdd697cec00d4afb2032b7 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 8.0E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CVS42_RS12600 5f8c10949abdd697cec00d4afb2032b7 471 SUPERFAMILY SSF46785 1 76 7.08E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS12600 5f8c10949abdd697cec00d4afb2032b7 471 SUPERFAMILY SSF53383 93 464 3.54E-93 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS03305 9b26b0beb9f0f851c4c515a1f19639be 161 SUPERFAMILY SSF55729 2 149 5.5E-36 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS03305 9b26b0beb9f0f851c4c515a1f19639be 161 Pfam PF13302 Acetyltransferase (GNAT) domain 9 148 2.9E-28 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS03305 9b26b0beb9f0f851c4c515a1f19639be 161 Gene3D G3DSA:3.40.630.30 1 159 8.9E-29 T 29-03-2018 CVS42_RS08880 1cab4c649b56f31d02c6367b34f6ba1b 176 Gene3D G3DSA:3.40.630.30 7 173 1.1E-15 T 29-03-2018 CVS42_RS08880 1cab4c649b56f31d02c6367b34f6ba1b 176 SUPERFAMILY SSF55729 8 157 1.78E-16 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS08880 1cab4c649b56f31d02c6367b34f6ba1b 176 Pfam PF13302 Acetyltransferase (GNAT) domain 10 146 1.4E-5 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS11375 764638a118f06bb8ab4486abc3dc6030 530 Gene3D G3DSA:3.40.50.300 2 285 2.8E-50 T 29-03-2018 CVS42_RS11375 764638a118f06bb8ab4486abc3dc6030 530 Gene3D G3DSA:3.40.50.300 307 530 2.2E-47 T 29-03-2018 CVS42_RS11375 764638a118f06bb8ab4486abc3dc6030 530 Pfam PF00005 ABC transporter 18 184 7.9E-20 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS11375 764638a118f06bb8ab4486abc3dc6030 530 Pfam PF00005 ABC transporter 336 467 7.2E-23 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS11375 764638a118f06bb8ab4486abc3dc6030 530 SUPERFAMILY SSF52540 6 237 1.35E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11375 764638a118f06bb8ab4486abc3dc6030 530 SMART SM00382 344 512 3.7E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS11375 764638a118f06bb8ab4486abc3dc6030 530 SMART SM00382 26 238 2.7E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS11375 764638a118f06bb8ab4486abc3dc6030 530 Pfam PF12848 ABC transporter 224 309 4.9E-21 T 29-03-2018 IPR032781 ABC-transporter extension domain CVS42_RS11375 764638a118f06bb8ab4486abc3dc6030 530 SUPERFAMILY SSF52540 299 524 1.07E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS04220 93f2b6bf32ea09dd2abc0c2fe51e4d63 729 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 337 688 1.7E-7 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS04220 93f2b6bf32ea09dd2abc0c2fe51e4d63 729 Gene3D G3DSA:2.40.50.200 31 151 7.3E-4 T 29-03-2018 CVS42_RS04220 93f2b6bf32ea09dd2abc0c2fe51e4d63 729 Gene3D G3DSA:3.60.10.10 328 696 1.6E-27 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS04220 93f2b6bf32ea09dd2abc0c2fe51e4d63 729 SUPERFAMILY SSF56219 326 342 1.31E-30 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS04220 93f2b6bf32ea09dd2abc0c2fe51e4d63 729 SUPERFAMILY SSF56219 372 697 1.31E-30 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS14990 77ad0045ed00e1f228bf49ec41436efd 169 SUPERFAMILY SSF51261 18 167 2.27E-55 T 29-03-2018 IPR011055 Duplicated hybrid motif CVS42_RS14990 77ad0045ed00e1f228bf49ec41436efd 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 9.4E-50 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CVS42_RS14990 77ad0045ed00e1f228bf49ec41436efd 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CVS42_RS14990 77ad0045ed00e1f228bf49ec41436efd 169 Gene3D G3DSA:2.70.70.10 9 169 1.2E-58 T 29-03-2018 CVS42_RS14990 77ad0045ed00e1f228bf49ec41436efd 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 1.7E-50 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CVS42_RS05955 f5fca58064f09c580c6e94d528df42e3 779 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 195 295 3.6E-11 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CVS42_RS05955 f5fca58064f09c580c6e94d528df42e3 779 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 318 459 1.9E-9 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CVS42_RS05955 f5fca58064f09c580c6e94d528df42e3 779 Gene3D G3DSA:2.40.110.10 194 306 6.6E-19 T 29-03-2018 CVS42_RS05955 f5fca58064f09c580c6e94d528df42e3 779 Gene3D G3DSA:1.10.540.10 34 193 1.5E-30 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CVS42_RS05955 f5fca58064f09c580c6e94d528df42e3 779 Gene3D G3DSA:1.20.140.10 307 467 2.4E-17 T 29-03-2018 CVS42_RS05955 f5fca58064f09c580c6e94d528df42e3 779 Pfam PF09317 Domain of unknown function (DUF1974) 472 756 9.4E-111 T 29-03-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 CVS42_RS05955 f5fca58064f09c580c6e94d528df42e3 779 SUPERFAMILY SSF56645 77 313 9.69E-48 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CVS42_RS05955 f5fca58064f09c580c6e94d528df42e3 779 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 80 190 5.0E-16 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CVS42_RS05955 f5fca58064f09c580c6e94d528df42e3 779 SUPERFAMILY SSF47203 318 470 1.22E-20 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CVS42_RS09350 262aac4fc47c0d37ecab58376a940c81 161 Pfam PF01799 [2Fe-2S] binding domain 81 156 5.6E-28 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CVS42_RS09350 262aac4fc47c0d37ecab58376a940c81 161 SUPERFAMILY SSF47741 92 160 3.14E-27 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CVS42_RS09350 262aac4fc47c0d37ecab58376a940c81 161 SUPERFAMILY SSF54292 10 85 3.41E-21 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CVS42_RS09350 262aac4fc47c0d37ecab58376a940c81 161 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 63 1.1E-8 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CVS42_RS09350 262aac4fc47c0d37ecab58376a940c81 161 Gene3D G3DSA:1.10.150.120 83 161 6.9E-31 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CVS42_RS09350 262aac4fc47c0d37ecab58376a940c81 161 Gene3D G3DSA:3.10.20.30 7 82 8.2E-23 T 29-03-2018 IPR012675 Beta-grasp domain CVS42_RS09350 262aac4fc47c0d37ecab58376a940c81 161 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 47 55 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CVS42_RS00810 7500943ed133e6340b03411290df2eee 301 Gene3D G3DSA:1.10.3720.10 14 296 3.8E-42 T 29-03-2018 CVS42_RS00810 7500943ed133e6340b03411290df2eee 301 SUPERFAMILY SSF161098 13 296 3.83E-55 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS00810 7500943ed133e6340b03411290df2eee 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 290 1.3E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS07845 1e2d2ad0b601fc028686407c30aea04c 162 Pfam PF13673 Acetyltransferase (GNAT) domain 59 153 1.7E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS07845 1e2d2ad0b601fc028686407c30aea04c 162 Gene3D G3DSA:3.40.630.30 4 160 2.1E-25 T 29-03-2018 CVS42_RS07845 1e2d2ad0b601fc028686407c30aea04c 162 SUPERFAMILY SSF55729 10 156 2.23E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS09610 3638b234f4ec1a675cd905ac8af730ac 65 SUPERFAMILY SSF143034 2 64 3.27E-23 T 29-03-2018 CVS42_RS09610 3638b234f4ec1a675cd905ac8af730ac 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.841 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CVS42_RS09610 3638b234f4ec1a675cd905ac8af730ac 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 29-03-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS09610 3638b234f4ec1a675cd905ac8af730ac 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 6.7E-20 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CVS42_RS09610 3638b234f4ec1a675cd905ac8af730ac 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 6.7E-20 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CVS42_RS09610 3638b234f4ec1a675cd905ac8af730ac 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 6.7E-20 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CVS42_RS09610 3638b234f4ec1a675cd905ac8af730ac 65 Pfam PF01632 Ribosomal protein L35 2 61 8.1E-23 T 29-03-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS09610 3638b234f4ec1a675cd905ac8af730ac 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 6.3E-26 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CVS42_RS18660 293f3e3b1c0898b7adfe22f8273af959 107 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 11 102 1.0E-42 T 29-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CVS42_RS18660 293f3e3b1c0898b7adfe22f8273af959 107 Gene3D G3DSA:1.10.140.10 4 104 1.1E-56 T 29-03-2018 IPR023453 Methionine repressor MetJ domain CVS42_RS18660 293f3e3b1c0898b7adfe22f8273af959 107 SUPERFAMILY SSF47598 4 104 1.2E-54 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CVS42_RS18660 293f3e3b1c0898b7adfe22f8273af959 107 Pfam PF01340 Met Apo-repressor, MetJ 4 98 1.9E-56 T 29-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CVS42_RS18050 b062e97c466eb173d33ce7d186a746a0 59 Pfam PF17320 Family of unknown function (DUF5363) 2 41 5.7E-6 T 29-03-2018 IPR035292 Protein of unknown function DUF5363 CVS42_RS06885 1e568de5d7ccebedd7e005d322a77162 397 SUPERFAMILY SSF53850 28 387 1.52E-58 T 29-03-2018 CVS42_RS06885 1e568de5d7ccebedd7e005d322a77162 397 Gene3D G3DSA:3.40.190.10 135 323 2.9E-31 T 29-03-2018 CVS42_RS06885 1e568de5d7ccebedd7e005d322a77162 397 Pfam PF13416 Bacterial extracellular solute-binding protein 44 325 2.8E-25 T 29-03-2018 CVS42_RS15290 ba2a8a08088adc8af0dc51094a4b5048 123 SUPERFAMILY SSF143737 12 112 2.75E-45 T 29-03-2018 CVS42_RS15290 ba2a8a08088adc8af0dc51094a4b5048 123 Gene3D G3DSA:3.30.450.20 22 114 2.3E-42 T 29-03-2018 CVS42_RS15290 ba2a8a08088adc8af0dc51094a4b5048 123 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 15 111 2.1E-43 T 29-03-2018 IPR009320 Antitoxin CbeA GO:0051495 CVS42_RS04695 576f79a54c7befff1473f34c79dcfbe8 227 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 222 6.9E-32 T 29-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CVS42_RS04695 576f79a54c7befff1473f34c79dcfbe8 227 Gene3D G3DSA:3.20.20.190 1 226 4.9E-59 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CVS42_RS04695 576f79a54c7befff1473f34c79dcfbe8 227 SUPERFAMILY SSF51695 1 224 4.71E-61 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CVS42_RS10365 ade9249bf73aea8389386e53c7cca2e6 422 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 13 422 1.4E-118 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CVS42_RS10365 ade9249bf73aea8389386e53c7cca2e6 422 SUPERFAMILY SSF56935 22 422 9.16E-99 T 29-03-2018 CVS42_RS10365 ade9249bf73aea8389386e53c7cca2e6 422 Gene3D G3DSA:2.40.160.60 22 422 4.9E-87 T 29-03-2018 CVS42_RS01185 ddc5a89c6de6f65618ebfab94d181e55 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.683 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01185 ddc5a89c6de6f65618ebfab94d181e55 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 29-03-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01185 ddc5a89c6de6f65618ebfab94d181e55 118 Gene3D G3DSA:1.10.8.50 1 66 1.4E-21 T 29-03-2018 CVS42_RS01185 ddc5a89c6de6f65618ebfab94d181e55 118 SUPERFAMILY SSF46946 2 114 2.5E-46 T 29-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CVS42_RS01185 ddc5a89c6de6f65618ebfab94d181e55 118 Gene3D G3DSA:4.10.910.10 67 84 7.6E-19 T 29-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01185 ddc5a89c6de6f65618ebfab94d181e55 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 4.7E-32 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01185 ddc5a89c6de6f65618ebfab94d181e55 118 Gene3D G3DSA:4.10.910.10 85 118 3.0E-26 T 29-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01185 ddc5a89c6de6f65618ebfab94d181e55 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.0E-53 T 29-03-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01185 ddc5a89c6de6f65618ebfab94d181e55 118 PIRSF PIRSF002134 1 118 4.7E-42 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS09865 7500b3cdf35b3a7e0567b7da711e65da 76 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 69 2.5E-12 T 29-03-2018 IPR008554 Glutaredoxin-like CVS42_RS09865 7500b3cdf35b3a7e0567b7da711e65da 76 Gene3D G3DSA:3.40.30.10 1 75 4.0E-8 T 29-03-2018 CVS42_RS09865 7500b3cdf35b3a7e0567b7da711e65da 76 SUPERFAMILY SSF52833 1 73 2.02E-14 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS04740 81b3c5deabfce3a641213d219faca6b4 299 Pfam PF03466 LysR substrate binding domain 87 289 1.6E-46 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS04740 81b3c5deabfce3a641213d219faca6b4 299 SUPERFAMILY SSF53850 88 295 3.12E-41 T 29-03-2018 CVS42_RS04740 81b3c5deabfce3a641213d219faca6b4 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS04740 81b3c5deabfce3a641213d219faca6b4 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS04740 81b3c5deabfce3a641213d219faca6b4 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS04740 81b3c5deabfce3a641213d219faca6b4 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.3E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS04740 81b3c5deabfce3a641213d219faca6b4 299 Gene3D G3DSA:1.10.10.10 1 81 1.3E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS04740 81b3c5deabfce3a641213d219faca6b4 299 SUPERFAMILY SSF46785 1 110 1.2E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS04740 81b3c5deabfce3a641213d219faca6b4 299 Gene3D G3DSA:3.40.190.10 176 264 1.0E-24 T 29-03-2018 CVS42_RS04740 81b3c5deabfce3a641213d219faca6b4 299 Gene3D G3DSA:3.40.190.10 88 175 7.6E-22 T 29-03-2018 CVS42_RS19015 f3f377cd56d081657873d91e20bb61f5 461 Gene3D G3DSA:3.40.50.300 137 312 7.8E-25 T 29-03-2018 CVS42_RS19015 f3f377cd56d081657873d91e20bb61f5 461 SUPERFAMILY SSF46689 351 444 5.82E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS19015 f3f377cd56d081657873d91e20bb61f5 461 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CVS42_RS19015 f3f377cd56d081657873d91e20bb61f5 461 Pfam PF00158 Sigma-54 interaction domain 142 307 7.5E-66 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CVS42_RS19015 f3f377cd56d081657873d91e20bb61f5 461 Gene3D G3DSA:1.10.8.60 314 381 5.6E-21 T 29-03-2018 CVS42_RS19015 f3f377cd56d081657873d91e20bb61f5 461 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CVS42_RS19015 f3f377cd56d081657873d91e20bb61f5 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CVS42_RS19015 f3f377cd56d081657873d91e20bb61f5 461 Pfam PF02954 Bacterial regulatory protein, Fis family 409 444 4.8E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS19015 f3f377cd56d081657873d91e20bb61f5 461 SUPERFAMILY SSF52540 141 375 2.37E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS19015 f3f377cd56d081657873d91e20bb61f5 461 Gene3D G3DSA:1.10.10.60 391 456 2.8E-10 T 29-03-2018 CVS42_RS19015 f3f377cd56d081657873d91e20bb61f5 461 Gene3D G3DSA:3.40.50.2300 14 136 1.1E-13 T 29-03-2018 CVS42_RS19015 f3f377cd56d081657873d91e20bb61f5 461 SMART SM00448 21 128 2.9E-6 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS19015 f3f377cd56d081657873d91e20bb61f5 461 Pfam PF00072 Response regulator receiver domain 34 129 7.1E-10 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS19015 f3f377cd56d081657873d91e20bb61f5 461 SMART SM00382 161 304 1.9E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS19015 f3f377cd56d081657873d91e20bb61f5 461 SUPERFAMILY SSF52172 22 186 5.83E-19 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS13640 6a57f6f38e4bcf6a5b4fdd5c2bcafda2 578 PIRSF PIRSF002741 42 578 4.2E-97 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CVS42_RS13640 6a57f6f38e4bcf6a5b4fdd5c2bcafda2 578 Gene3D G3DSA:3.90.76.10 100 213 2.0E-29 T 29-03-2018 CVS42_RS13640 6a57f6f38e4bcf6a5b4fdd5c2bcafda2 578 Gene3D G3DSA:3.10.105.10 349 547 3.9E-53 T 29-03-2018 CVS42_RS13640 6a57f6f38e4bcf6a5b4fdd5c2bcafda2 578 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 119 492 1.3E-75 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CVS42_RS13640 6a57f6f38e4bcf6a5b4fdd5c2bcafda2 578 Gene3D G3DSA:3.40.190.10 214 348 9.2E-33 T 29-03-2018 CVS42_RS13640 6a57f6f38e4bcf6a5b4fdd5c2bcafda2 578 SUPERFAMILY SSF53850 72 563 6.52E-125 T 29-03-2018 CVS42_RS05670 c24266be2c1b9ddd6727c8d0f7221af6 204 SUPERFAMILY SSF101322 3 203 5.89E-77 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CVS42_RS05670 c24266be2c1b9ddd6727c8d0f7221af6 204 Pfam PF04356 Protein of unknown function (DUF489) 7 198 1.2E-76 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CVS42_RS05670 c24266be2c1b9ddd6727c8d0f7221af6 204 Gene3D G3DSA:1.10.3890.10 4 204 1.6E-77 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CVS42_RS05670 c24266be2c1b9ddd6727c8d0f7221af6 204 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 197 1.0E-58 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CVS42_RS05670 c24266be2c1b9ddd6727c8d0f7221af6 204 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 204 34.825 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CVS42_RS21035 c76604e9f3170a5ef36d60cc297d9bdd 302 Gene3D G3DSA:3.40.1500.10 1 302 2.3E-141 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CVS42_RS21035 c76604e9f3170a5ef36d60cc297d9bdd 302 Pfam PF01218 Coproporphyrinogen III oxidase 8 302 4.7E-134 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CVS42_RS21035 c76604e9f3170a5ef36d60cc297d9bdd 302 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 29-03-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CVS42_RS21035 c76604e9f3170a5ef36d60cc297d9bdd 302 PRINTS PR00073 Coprogen oxidase signature 90 114 1.1E-86 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CVS42_RS21035 c76604e9f3170a5ef36d60cc297d9bdd 302 PRINTS PR00073 Coprogen oxidase signature 162 191 1.1E-86 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CVS42_RS21035 c76604e9f3170a5ef36d60cc297d9bdd 302 PRINTS PR00073 Coprogen oxidase signature 262 288 1.1E-86 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CVS42_RS21035 c76604e9f3170a5ef36d60cc297d9bdd 302 PRINTS PR00073 Coprogen oxidase signature 31 47 1.1E-86 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CVS42_RS21035 c76604e9f3170a5ef36d60cc297d9bdd 302 PRINTS PR00073 Coprogen oxidase signature 48 69 1.1E-86 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CVS42_RS21035 c76604e9f3170a5ef36d60cc297d9bdd 302 PRINTS PR00073 Coprogen oxidase signature 125 147 1.1E-86 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CVS42_RS21035 c76604e9f3170a5ef36d60cc297d9bdd 302 PRINTS PR00073 Coprogen oxidase signature 234 261 1.1E-86 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CVS42_RS21035 c76604e9f3170a5ef36d60cc297d9bdd 302 SUPERFAMILY SSF102886 4 302 3.53E-141 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CVS42_RS21035 c76604e9f3170a5ef36d60cc297d9bdd 302 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 57.478 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CVS42_RS21035 c76604e9f3170a5ef36d60cc297d9bdd 302 PIRSF PIRSF000166 2 302 2.2E-128 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CVS42_RS06930 eb573e047904941e09e859150e5111e1 206 Gene3D G3DSA:1.10.10.60 3 39 1.3E-13 T 29-03-2018 CVS42_RS06930 eb573e047904941e09e859150e5111e1 206 Gene3D G3DSA:1.10.357.10 68 202 1.6E-12 T 29-03-2018 CVS42_RS06930 eb573e047904941e09e859150e5111e1 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 2.3E-16 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS06930 eb573e047904941e09e859150e5111e1 206 SUPERFAMILY SSF46689 9 80 2.1E-18 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS06930 eb573e047904941e09e859150e5111e1 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 2.1E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS06930 eb573e047904941e09e859150e5111e1 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 2.1E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS06930 eb573e047904941e09e859150e5111e1 206 Gene3D G3DSA:1.10.260.40 40 67 3.5E-12 T 29-03-2018 CVS42_RS19490 c4aaf89b9d12ce0e87fa1c6034ea5607 239 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 239 26.484 T 29-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CVS42_RS19490 c4aaf89b9d12ce0e87fa1c6034ea5607 239 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 7 238 3.3E-60 T 29-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CVS42_RS19490 c4aaf89b9d12ce0e87fa1c6034ea5607 239 Gene3D G3DSA:2.160.20.70 123 239 5.1E-33 T 29-03-2018 CVS42_RS19490 c4aaf89b9d12ce0e87fa1c6034ea5607 239 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 4 103 2.4E-21 T 29-03-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 CVS42_RS19490 c4aaf89b9d12ce0e87fa1c6034ea5607 239 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 138 235 4.5E-31 T 29-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CVS42_RS19490 c4aaf89b9d12ce0e87fa1c6034ea5607 239 SUPERFAMILY SSF63848 134 238 3.53E-30 T 29-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CVS42_RS09140 c4aaf89b9d12ce0e87fa1c6034ea5607 239 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 239 26.484 T 29-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CVS42_RS09140 c4aaf89b9d12ce0e87fa1c6034ea5607 239 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 7 238 3.3E-60 T 29-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CVS42_RS09140 c4aaf89b9d12ce0e87fa1c6034ea5607 239 Gene3D G3DSA:2.160.20.70 123 239 5.1E-33 T 29-03-2018 CVS42_RS09140 c4aaf89b9d12ce0e87fa1c6034ea5607 239 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 4 103 2.4E-21 T 29-03-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 CVS42_RS09140 c4aaf89b9d12ce0e87fa1c6034ea5607 239 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 138 235 4.5E-31 T 29-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CVS42_RS09140 c4aaf89b9d12ce0e87fa1c6034ea5607 239 SUPERFAMILY SSF63848 134 238 3.53E-30 T 29-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CVS42_RS09175 644f17f3f369f855814945b12c1f47f7 323 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 7 303 1.3E-130 T 29-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CVS42_RS09175 644f17f3f369f855814945b12c1f47f7 323 ProSitePatterns PS00433 Phosphofructokinase signature. 247 265 - T 29-03-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CVS42_RS09175 644f17f3f369f855814945b12c1f47f7 323 Gene3D G3DSA:3.40.50.450 213 310 5.0E-9 T 29-03-2018 CVS42_RS09175 644f17f3f369f855814945b12c1f47f7 323 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 5 323 47.372 T 29-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CVS42_RS09175 644f17f3f369f855814945b12c1f47f7 323 PIRSF PIRSF000532 4 322 2.8E-127 T 29-03-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CVS42_RS09175 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 10 29 2.1E-86 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CVS42_RS09175 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 97 113 2.1E-86 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CVS42_RS09175 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 162 178 2.1E-86 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CVS42_RS09175 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 180 197 2.1E-86 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CVS42_RS09175 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 142 160 2.1E-86 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CVS42_RS09175 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 243 265 2.1E-86 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CVS42_RS09175 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 124 141 2.1E-86 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CVS42_RS09175 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 216 228 2.1E-86 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CVS42_RS09175 644f17f3f369f855814945b12c1f47f7 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 35 48 2.1E-86 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CVS42_RS09175 644f17f3f369f855814945b12c1f47f7 323 Gene3D G3DSA:3.40.50.450 1 212 7.0E-87 T 29-03-2018 CVS42_RS09175 644f17f3f369f855814945b12c1f47f7 323 SUPERFAMILY SSF53784 3 320 2.88E-117 T 29-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CVS42_RS09175 644f17f3f369f855814945b12c1f47f7 323 Pfam PF00365 Phosphofructokinase 7 278 1.3E-109 T 29-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CVS42_RS04720 0ff87a1ceccd1e7b70e196b254c76dd0 299 SUPERFAMILY SSF53850 90 294 1.61E-42 T 29-03-2018 CVS42_RS04720 0ff87a1ceccd1e7b70e196b254c76dd0 299 Gene3D G3DSA:1.10.10.10 3 89 3.0E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS04720 0ff87a1ceccd1e7b70e196b254c76dd0 299 Gene3D G3DSA:3.40.190.10 90 176 8.7E-18 T 29-03-2018 CVS42_RS04720 0ff87a1ceccd1e7b70e196b254c76dd0 299 Pfam PF03466 LysR substrate binding domain 89 291 5.1E-38 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS04720 0ff87a1ceccd1e7b70e196b254c76dd0 299 SUPERFAMILY SSF46785 4 84 1.72E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS04720 0ff87a1ceccd1e7b70e196b254c76dd0 299 Gene3D G3DSA:3.40.190.10 177 262 2.0E-25 T 29-03-2018 CVS42_RS04720 0ff87a1ceccd1e7b70e196b254c76dd0 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 9.1E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS04705 5b092a6da3c62e88eae1ec5f642a2a1a 445 PIRSF PIRSF006603 1 442 5.4E-54 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS04705 5b092a6da3c62e88eae1ec5f642a2a1a 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 21 416 1.0E-44 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS04705 5b092a6da3c62e88eae1ec5f642a2a1a 445 Pfam PF01554 MatE 21 182 7.5E-26 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS04705 5b092a6da3c62e88eae1ec5f642a2a1a 445 Pfam PF01554 MatE 265 393 2.0E-10 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS07490 04d203e052af215a37fa345f1b332cd0 511 SUPERFAMILY SSF56176 425 508 9.82E-18 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CVS42_RS07490 04d203e052af215a37fa345f1b332cd0 511 Pfam PF00571 CBS domain 369 417 0.004 T 29-03-2018 IPR000644 CBS domain CVS42_RS07490 04d203e052af215a37fa345f1b332cd0 511 SUPERFAMILY SSF54631 286 420 2.91E-25 T 29-03-2018 CVS42_RS07490 04d203e052af215a37fa345f1b332cd0 511 Gene3D G3DSA:3.30.465.10 427 509 5.4E-20 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CVS42_RS07490 04d203e052af215a37fa345f1b332cd0 511 Pfam PF03471 Transporter associated domain 431 507 1.4E-17 T 29-03-2018 IPR005170 Transporter-associated domain CVS42_RS07490 04d203e052af215a37fa345f1b332cd0 511 Pfam PF03741 Integral membrane protein TerC family 14 203 1.7E-47 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CVS42_RS07490 04d203e052af215a37fa345f1b332cd0 511 Gene3D G3DSA:3.10.580.10 279 426 9.7E-26 T 29-03-2018 CVS42_RS07490 04d203e052af215a37fa345f1b332cd0 511 SMART SM01091 429 510 2.1E-22 T 29-03-2018 IPR005170 Transporter-associated domain CVS42_RS07490 04d203e052af215a37fa345f1b332cd0 511 SMART SM00116 369 417 1.2 T 29-03-2018 IPR000644 CBS domain CVS42_RS07490 04d203e052af215a37fa345f1b332cd0 511 SMART SM00116 307 356 7.6 T 29-03-2018 IPR000644 CBS domain CVS42_RS03215 b2719c29f6f428547ad9231184cf0f96 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS03215 b2719c29f6f428547ad9231184cf0f96 305 SMART SM00382 29 212 7.4E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS03215 b2719c29f6f428547ad9231184cf0f96 305 Pfam PF00005 ABC transporter 20 164 3.2E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS03215 b2719c29f6f428547ad9231184cf0f96 305 Gene3D G3DSA:3.40.50.300 1 293 1.2E-62 T 29-03-2018 CVS42_RS03215 b2719c29f6f428547ad9231184cf0f96 305 SUPERFAMILY SSF52540 3 230 1.7E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS04485 00d1ff420b7f4ded1a8db0d08497d9c1 215 SUPERFAMILY SSF52833 93 104 9.91E-6 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS04485 00d1ff420b7f4ded1a8db0d08497d9c1 215 SUPERFAMILY SSF52833 143 203 9.91E-6 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS04485 00d1ff420b7f4ded1a8db0d08497d9c1 215 Gene3D G3DSA:3.40.30.10 50 209 6.0E-5 T 29-03-2018 CVS42_RS04485 00d1ff420b7f4ded1a8db0d08497d9c1 215 Gene3D G3DSA:3.10.450.70 1 49 3.6E-14 T 29-03-2018 CVS42_RS04485 00d1ff420b7f4ded1a8db0d08497d9c1 215 SUPERFAMILY SSF54423 4 58 6.67E-10 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CVS42_RS04485 00d1ff420b7f4ded1a8db0d08497d9c1 215 Pfam PF10411 Disulfide bond isomerase protein N-terminus 7 57 1.0E-11 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CVS42_RS02380 89f10079d200238ec0490ee28959b1a7 412 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.802 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CVS42_RS02380 89f10079d200238ec0490ee28959b1a7 412 SMART SM00471 224 338 1.5E-5 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS02380 89f10079d200238ec0490ee28959b1a7 412 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.195 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CVS42_RS02380 89f10079d200238ec0490ee28959b1a7 412 PIRSF PIRSF000813 1 408 9.4E-192 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CVS42_RS02380 89f10079d200238ec0490ee28959b1a7 412 Pfam PF01743 Poly A polymerase head domain 3 122 4.7E-18 T 29-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CVS42_RS02380 89f10079d200238ec0490ee28959b1a7 412 Pfam PF01966 HD domain 229 327 6.0E-11 T 29-03-2018 IPR006674 HD domain CVS42_RS02380 89f10079d200238ec0490ee28959b1a7 412 SUPERFAMILY SSF81891 120 397 1.83E-56 T 29-03-2018 CVS42_RS02380 89f10079d200238ec0490ee28959b1a7 412 Gene3D G3DSA:3.30.460.10 1 118 2.7E-28 T 29-03-2018 CVS42_RS02380 89f10079d200238ec0490ee28959b1a7 412 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 1.1E-17 T 29-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CVS42_RS02380 89f10079d200238ec0490ee28959b1a7 412 Gene3D G3DSA:1.10.3090.10 119 404 4.5E-61 T 29-03-2018 CVS42_RS02380 89f10079d200238ec0490ee28959b1a7 412 SUPERFAMILY SSF81301 2 119 1.42E-29 T 29-03-2018 CVS42_RS13000 c368cd1e0efc31d0cccb4198877aa794 378 SUPERFAMILY SSF53756 91 325 4.34E-16 T 29-03-2018 CVS42_RS13000 c368cd1e0efc31d0cccb4198877aa794 378 Gene3D G3DSA:3.40.50.2000 180 356 3.2E-18 T 29-03-2018 CVS42_RS13000 c368cd1e0efc31d0cccb4198877aa794 378 Pfam PF00534 Glycosyl transferases group 1 192 309 3.6E-11 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 SMART SM00433 34 632 1.4E-201 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 Pfam PF01751 Toprim domain 413 522 2.7E-12 T 29-03-2018 IPR006171 TOPRIM domain CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 SMART SM00387 27 173 3.6E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 SUPERFAMILY SSF56719 388 629 2.56E-75 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR00418 DNA topoisomerase II family signature 31 46 4.9E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR00418 DNA topoisomerase II family signature 414 428 4.9E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR00418 DNA topoisomerase II family signature 479 495 4.9E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR00418 DNA topoisomerase II family signature 517 529 4.9E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR00418 DNA topoisomerase II family signature 66 79 4.9E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR00418 DNA topoisomerase II family signature 497 514 4.9E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR00418 DNA topoisomerase II family signature 109 123 4.9E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR00418 DNA topoisomerase II family signature 266 279 4.9E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR00418 DNA topoisomerase II family signature 562 578 4.9E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 SUPERFAMILY SSF55874 4 215 2.01E-66 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 2.2E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 636 46.646 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 Gene3D G3DSA:3.40.50.670 395 634 2.0E-75 T 29-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 29-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 558 628 1.3E-23 T 29-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 Gene3D G3DSA:3.30.230.10 217 391 2.7E-41 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 Pfam PF00204 DNA gyrase B 218 384 2.9E-41 T 29-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 Gene3D G3DSA:3.30.565.10 17 216 2.1E-64 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 4.6E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 4.6E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 4.6E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 4.6E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 4.6E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 4.6E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 4.6E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 4.6E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 4.6E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 4.6E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 4.6E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 4.6E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 4.6E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 4.6E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 SUPERFAMILY SSF54211 217 382 1.35E-46 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS02185 ce18598bdb744821c6e5a5328675b72e 636 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 632 0.0 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CVS42_RS19170 1e1091f3e5f933aec2ff63548f25d55a 371 Pfam PF03841 L-seryl-tRNA selenium transferase 121 270 2.2E-12 T 29-03-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CVS42_RS19170 1e1091f3e5f933aec2ff63548f25d55a 371 Gene3D G3DSA:3.40.640.10 30 262 3.8E-19 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS19170 1e1091f3e5f933aec2ff63548f25d55a 371 SUPERFAMILY SSF53383 7 369 1.54E-35 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS19170 1e1091f3e5f933aec2ff63548f25d55a 371 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 4 366 1.4E-184 T 29-03-2018 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 CVS42_RS21230 089bbc1536eae32054be884882f651c4 512 SMART SM00382 170 361 1.5E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS21230 089bbc1536eae32054be884882f651c4 512 Gene3D G3DSA:3.40.50.300 49 356 1.8E-24 T 29-03-2018 CVS42_RS21230 089bbc1536eae32054be884882f651c4 512 SUPERFAMILY SSF52540 171 205 3.84E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS21230 089bbc1536eae32054be884882f651c4 512 SUPERFAMILY SSF52540 236 358 3.84E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS21230 089bbc1536eae32054be884882f651c4 512 Pfam PF07728 AAA domain (dynein-related subfamily) 213 351 2.0E-13 T 29-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CVS42_RS08695 570c26704121be9c1706fd70ddd8627b 230 Gene3D G3DSA:3.30.70.20 151 230 5.2E-24 T 29-03-2018 CVS42_RS08695 570c26704121be9c1706fd70ddd8627b 230 Pfam PF13247 4Fe-4S dicluster domain 93 190 1.7E-23 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS08695 570c26704121be9c1706fd70ddd8627b 230 Gene3D G3DSA:3.30.70.20 117 150 3.7E-18 T 29-03-2018 CVS42_RS08695 570c26704121be9c1706fd70ddd8627b 230 Gene3D G3DSA:3.30.70.20 28 57 5.3E-4 T 29-03-2018 CVS42_RS08695 570c26704121be9c1706fd70ddd8627b 230 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 134 145 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS08695 570c26704121be9c1706fd70ddd8627b 230 Gene3D G3DSA:3.30.70.20 58 116 2.0E-15 T 29-03-2018 CVS42_RS08695 570c26704121be9c1706fd70ddd8627b 230 SUPERFAMILY SSF54862 45 224 3.03E-60 T 29-03-2018 CVS42_RS08695 570c26704121be9c1706fd70ddd8627b 230 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 227 2.2E-115 T 29-03-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein CVS42_RS04425 9e52d96a2434b010fb5aa74922e1144a 113 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 1.0E-27 T 29-03-2018 CVS42_RS04425 9e52d96a2434b010fb5aa74922e1144a 113 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 6.5E-38 T 29-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CVS42_RS04425 9e52d96a2434b010fb5aa74922e1144a 113 SUPERFAMILY SSF81301 3 111 1.96E-38 T 29-03-2018 CVS42_RS04425 9e52d96a2434b010fb5aa74922e1144a 113 Gene3D G3DSA:3.30.460.10 1 113 2.3E-35 T 29-03-2018 CVS42_RS04425 9e52d96a2434b010fb5aa74922e1144a 113 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.423 T 29-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CVS42_RS12960 6f58f492f4b74eee88b8ffaa767e0e6d 414 SUPERFAMILY SSF52413 311 403 2.49E-20 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CVS42_RS12960 6f58f492f4b74eee88b8ffaa767e0e6d 414 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 403 1.8E-16 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CVS42_RS12960 6f58f492f4b74eee88b8ffaa767e0e6d 414 PIRSF PIRSF500136 1 412 2.6E-139 T 29-03-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CVS42_RS12960 6f58f492f4b74eee88b8ffaa767e0e6d 414 Gene3D G3DSA:1.20.5.170 210 233 7.5E-16 T 29-03-2018 CVS42_RS12960 6f58f492f4b74eee88b8ffaa767e0e6d 414 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 409 2.4E-115 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CVS42_RS12960 6f58f492f4b74eee88b8ffaa767e0e6d 414 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 192 1.6E-51 T 29-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CVS42_RS12960 6f58f492f4b74eee88b8ffaa767e0e6d 414 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 210 297 2.2E-27 T 29-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CVS42_RS12960 6f58f492f4b74eee88b8ffaa767e0e6d 414 Gene3D G3DSA:3.40.50.720 234 413 4.7E-51 T 29-03-2018 CVS42_RS12960 6f58f492f4b74eee88b8ffaa767e0e6d 414 PIRSF PIRSF000124 4 413 7.4E-75 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CVS42_RS12960 6f58f492f4b74eee88b8ffaa767e0e6d 414 SUPERFAMILY SSF48179 210 302 1.26E-28 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CVS42_RS12960 6f58f492f4b74eee88b8ffaa767e0e6d 414 SUPERFAMILY SSF51735 6 201 1.75E-42 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS12960 6f58f492f4b74eee88b8ffaa767e0e6d 414 SMART SM00984 320 409 2.5E-10 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CVS42_RS12960 6f58f492f4b74eee88b8ffaa767e0e6d 414 Gene3D G3DSA:3.40.50.720 2 208 6.4E-43 T 29-03-2018 CVS42_RS00510 391e8a65e06f0652ab9b038b473c0e36 376 Pfam PF13416 Bacterial extracellular solute-binding protein 39 317 6.4E-7 T 29-03-2018 CVS42_RS00510 391e8a65e06f0652ab9b038b473c0e36 376 SUPERFAMILY SSF53850 23 355 7.97E-23 T 29-03-2018 CVS42_RS00510 391e8a65e06f0652ab9b038b473c0e36 376 Gene3D G3DSA:3.40.190.10 16 147 3.9E-4 T 29-03-2018 CVS42_RS00510 391e8a65e06f0652ab9b038b473c0e36 376 Gene3D G3DSA:3.40.190.10 148 298 5.4E-7 T 29-03-2018 CVS42_RS13085 50acf20fb378d7acf9031a86bd8e4c16 453 Pfam PF09940 Domain of unknown function (DUF2172) 77 168 1.5E-39 T 29-03-2018 IPR032610 Domain of unknown function DUF2172 CVS42_RS13085 50acf20fb378d7acf9031a86bd8e4c16 453 PIRSF PIRSF015244 8 443 1.8E-157 T 29-03-2018 IPR012353 Uncharacterised conserved protein UCP01524, polysaccharide biosynthesis aminopeptidase-like CVS42_RS13085 50acf20fb378d7acf9031a86bd8e4c16 453 SUPERFAMILY SSF53187 101 364 5.02E-33 T 29-03-2018 CVS42_RS13085 50acf20fb378d7acf9031a86bd8e4c16 453 Pfam PF16221 winged helix-turn-helix 369 441 2.6E-25 T 29-03-2018 IPR032622 UCP01524, winged helix-turn-helix domain CVS42_RS13085 50acf20fb378d7acf9031a86bd8e4c16 453 Pfam PF16254 Domain of unknown function (DUF4910) 25 365 2.7E-93 T 29-03-2018 IPR032589 Domain of unknown function DUF4910 CVS42_RS08595 f12dd75b06920163dd0f7d724a18741e 588 SUPERFAMILY SSF51905 4 259 5.49E-75 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS08595 f12dd75b06920163dd0f7d724a18741e 588 SUPERFAMILY SSF51905 359 436 5.49E-75 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS08595 f12dd75b06920163dd0f7d724a18741e 588 Gene3D G3DSA:3.50.50.60 4 294 1.3E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS08595 f12dd75b06920163dd0f7d724a18741e 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 4.5E-35 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS08595 f12dd75b06920163dd0f7d724a18741e 588 Pfam PF00890 FAD binding domain 9 405 2.1E-120 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS08595 f12dd75b06920163dd0f7d724a18741e 588 Gene3D G3DSA:4.10.80.40 541 588 1.8E-13 T 29-03-2018 CVS42_RS08595 f12dd75b06920163dd0f7d724a18741e 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 6.9E-240 T 29-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS08595 f12dd75b06920163dd0f7d724a18741e 588 PIRSF PIRSF000171 2 580 3.7E-48 T 29-03-2018 CVS42_RS08595 f12dd75b06920163dd0f7d724a18741e 588 SUPERFAMILY SSF46977 452 588 8.11E-47 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS08595 f12dd75b06920163dd0f7d724a18741e 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 9.2E-275 T 29-03-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS08595 f12dd75b06920163dd0f7d724a18741e 588 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 380 395 9.2E-6 T 29-03-2018 CVS42_RS08595 f12dd75b06920163dd0f7d724a18741e 588 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 9.2E-6 T 29-03-2018 CVS42_RS08595 f12dd75b06920163dd0f7d724a18741e 588 Gene3D G3DSA:1.20.58.100 431 540 1.8E-34 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS08595 f12dd75b06920163dd0f7d724a18741e 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 29-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS08595 f12dd75b06920163dd0f7d724a18741e 588 Gene3D G3DSA:3.50.50.60 316 421 1.6E-16 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS08595 f12dd75b06920163dd0f7d724a18741e 588 SUPERFAMILY SSF56425 236 356 2.39E-42 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS21050 7da10a4e025f87e9a51ca275bce47d09 185 SUPERFAMILY SSF57783 65 105 3.74E-11 T 29-03-2018 CVS42_RS21050 7da10a4e025f87e9a51ca275bce47d09 185 Gene3D G3DSA:2.20.25.10 150 184 0.0024 T 29-03-2018 CVS42_RS21050 7da10a4e025f87e9a51ca275bce47d09 185 SUPERFAMILY SSF57783 16 54 1.46E-12 T 29-03-2018 CVS42_RS21050 7da10a4e025f87e9a51ca275bce47d09 185 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 20 55 2.3E-15 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CVS42_RS21050 7da10a4e025f87e9a51ca275bce47d09 185 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 152 166 0.49 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CVS42_RS21050 7da10a4e025f87e9a51ca275bce47d09 185 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 109 147 5.9E-15 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CVS42_RS21050 7da10a4e025f87e9a51ca275bce47d09 185 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 68 103 3.7E-14 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CVS42_RS21050 7da10a4e025f87e9a51ca275bce47d09 185 Gene3D G3DSA:3.30.65.10 105 148 1.1E-12 T 29-03-2018 CVS42_RS21050 7da10a4e025f87e9a51ca275bce47d09 185 Gene3D G3DSA:3.30.65.10 10 60 2.5E-16 T 29-03-2018 CVS42_RS21050 7da10a4e025f87e9a51ca275bce47d09 185 Gene3D G3DSA:3.30.65.10 61 104 5.3E-15 T 29-03-2018 CVS42_RS07850 9e8cc065c6194c3bbed4918d2051d07b 127 Pfam PF04237 YjbR 11 101 3.4E-29 T 29-03-2018 IPR007351 Uncharacterised protein YjbR CVS42_RS07850 9e8cc065c6194c3bbed4918d2051d07b 127 SUPERFAMILY SSF142906 1 114 6.8E-40 T 29-03-2018 CVS42_RS07850 9e8cc065c6194c3bbed4918d2051d07b 127 Gene3D G3DSA:3.30.1460.30 3 103 0.0011 T 29-03-2018 CVS42_RS04375 336d92fc7a681f5d23b5813beda9bad5 187 Gene3D G3DSA:3.90.79.10 32 186 1.8E-18 T 29-03-2018 CVS42_RS04375 336d92fc7a681f5d23b5813beda9bad5 187 ProSitePatterns PS00893 Nudix box signature. 61 82 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CVS42_RS04375 336d92fc7a681f5d23b5813beda9bad5 187 SUPERFAMILY SSF55811 31 153 1.76E-20 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CVS42_RS04375 336d92fc7a681f5d23b5813beda9bad5 187 Pfam PF00293 NUDIX domain 36 153 4.5E-11 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CVS42_RS06095 66f1c003adc76daea46cac2ed32c7b59 305 Pfam PF04055 Radical SAM superfamily 44 189 4.4E-17 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS06095 66f1c003adc76daea46cac2ed32c7b59 305 SUPERFAMILY SSF102114 37 212 1.12E-29 T 29-03-2018 CVS42_RS06095 66f1c003adc76daea46cac2ed32c7b59 305 Gene3D G3DSA:3.20.20.70 26 213 2.0E-26 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS06095 66f1c003adc76daea46cac2ed32c7b59 305 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 44 55 - T 29-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 CVS42_RS00660 ed92ed35ea5b76fb8f64c8138ee04113 206 SUPERFAMILY SSF88659 141 201 8.04E-14 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS00660 ed92ed35ea5b76fb8f64c8138ee04113 206 SUPERFAMILY SSF88946 26 125 9.58E-24 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS00660 ed92ed35ea5b76fb8f64c8138ee04113 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 40 200 2.0E-30 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS00660 ed92ed35ea5b76fb8f64c8138ee04113 206 Gene3D G3DSA:1.10.10.10 110 204 6.6E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS00660 ed92ed35ea5b76fb8f64c8138ee04113 206 Pfam PF04542 Sigma-70 region 2 44 111 6.0E-19 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS00660 ed92ed35ea5b76fb8f64c8138ee04113 206 Pfam PF04545 Sigma-70, region 4 151 199 1.5E-13 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS00660 ed92ed35ea5b76fb8f64c8138ee04113 206 Gene3D G3DSA:1.10.1740.10 28 109 8.2E-22 T 29-03-2018 CVS42_RS02590 10f51b62db0d27e116b6e895f44f2888 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 3 247 1.2E-87 T 29-03-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 CVS42_RS02590 10f51b62db0d27e116b6e895f44f2888 249 SMART SM00967 5 81 2.4E-21 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CVS42_RS02590 10f51b62db0d27e116b6e895f44f2888 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 78 1.3E-19 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CVS42_RS02590 10f51b62db0d27e116b6e895f44f2888 249 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 248 44.636 T 29-03-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CVS42_RS02590 10f51b62db0d27e116b6e895f44f2888 249 SUPERFAMILY SSF55315 3 77 1.77E-19 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like CVS42_RS02590 10f51b62db0d27e116b6e895f44f2888 249 Pfam PF00588 SpoU rRNA Methylase family 101 241 1.2E-40 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CVS42_RS02590 10f51b62db0d27e116b6e895f44f2888 249 Gene3D G3DSA:3.40.1280.10 79 249 6.0E-50 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CVS42_RS02590 10f51b62db0d27e116b6e895f44f2888 249 SUPERFAMILY SSF75217 97 248 3.6E-50 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CVS42_RS02590 10f51b62db0d27e116b6e895f44f2888 249 Gene3D G3DSA:3.30.1330.30 1 76 2.9E-17 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like CVS42_RS10860 9abb44def619271b060a1c4bad55e5b5 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 156 184 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CVS42_RS10860 9abb44def619271b060a1c4bad55e5b5 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 9.2E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10860 9abb44def619271b060a1c4bad55e5b5 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 9.2E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10860 9abb44def619271b060a1c4bad55e5b5 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 158 9.2E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10860 9abb44def619271b060a1c4bad55e5b5 259 Gene3D G3DSA:3.40.50.720 1 259 1.7E-63 T 29-03-2018 CVS42_RS10860 9abb44def619271b060a1c4bad55e5b5 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 2.2E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10860 9abb44def619271b060a1c4bad55e5b5 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 2.2E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10860 9abb44def619271b060a1c4bad55e5b5 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 2.2E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10860 9abb44def619271b060a1c4bad55e5b5 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.2E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10860 9abb44def619271b060a1c4bad55e5b5 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 160 2.2E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10860 9abb44def619271b060a1c4bad55e5b5 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 2.2E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10860 9abb44def619271b060a1c4bad55e5b5 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 257 7.7E-50 T 29-03-2018 CVS42_RS10860 9abb44def619271b060a1c4bad55e5b5 259 SUPERFAMILY SSF51735 1 257 4.72E-65 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS10860 9abb44def619271b060a1c4bad55e5b5 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 200 7.0E-5 T 29-03-2018 CVS42_RS17760 6f2042b7ea1216022d4bd95940f0afc0 124 SUPERFAMILY SSF47175 25 118 8.54E-15 T 29-03-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 CVS42_RS17760 6f2042b7ea1216022d4bd95940f0afc0 124 Pfam PF07361 Cytochrome b562 25 120 5.9E-21 T 29-03-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 CVS42_RS17760 6f2042b7ea1216022d4bd95940f0afc0 124 Gene3D G3DSA:1.20.120.10 25 119 1.4E-11 T 29-03-2018 CVS42_RS21120 9125898ce0a092c69cebb8b1fd0b1346 333 Pfam PF00962 Adenosine/AMP deaminase 6 326 1.1E-92 T 29-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 CVS42_RS21120 9125898ce0a092c69cebb8b1fd0b1346 333 Gene3D G3DSA:3.20.20.140 2 333 1.6E-75 T 29-03-2018 CVS42_RS21120 9125898ce0a092c69cebb8b1fd0b1346 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 329 8.1E-116 T 29-03-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 CVS42_RS21120 9125898ce0a092c69cebb8b1fd0b1346 333 SUPERFAMILY SSF51556 4 325 1.02E-75 T 29-03-2018 IPR032466 Metal-dependent hydrolase CVS42_RS21120 9125898ce0a092c69cebb8b1fd0b1346 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.235 T 29-03-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 CVS42_RS14620 6cf576a00ccf01da2fcc53817f7cdc0f 171 SUPERFAMILY SSF143422 1 137 1.18E-36 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CVS42_RS14620 6cf576a00ccf01da2fcc53817f7cdc0f 171 Gene3D G3DSA:3.30.70.1290 1 137 4.1E-36 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CVS42_RS14620 6cf576a00ccf01da2fcc53817f7cdc0f 171 SMART SM01321 8 131 1.5E-38 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CVS42_RS14620 6cf576a00ccf01da2fcc53817f7cdc0f 171 Pfam PF01797 Transposase IS200 like 23 129 6.3E-11 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CVS42_RS16105 c04823a313dc5a9705bce8701265591b 146 PRINTS PR00369 Flavodoxin signature 106 125 1.3E-6 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CVS42_RS16105 c04823a313dc5a9705bce8701265591b 146 PRINTS PR00369 Flavodoxin signature 51 62 1.3E-6 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CVS42_RS16105 c04823a313dc5a9705bce8701265591b 146 PRINTS PR00369 Flavodoxin signature 82 92 1.3E-6 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CVS42_RS16105 c04823a313dc5a9705bce8701265591b 146 SUPERFAMILY SSF52218 1 142 3.99E-39 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS16105 c04823a313dc5a9705bce8701265591b 146 Pfam PF00258 Flavodoxin 6 138 1.4E-25 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CVS42_RS16105 c04823a313dc5a9705bce8701265591b 146 Gene3D G3DSA:3.40.50.360 1 142 3.7E-33 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS17820 b8ab44b443ded67d486c4fbda7a33bfc 591 SUPERFAMILY SSF55486 187 479 1.37E-88 T 29-03-2018 CVS42_RS17820 b8ab44b443ded67d486c4fbda7a33bfc 591 Gene3D G3DSA:2.60.120.380 499 591 3.8E-12 T 29-03-2018 CVS42_RS17820 b8ab44b443ded67d486c4fbda7a33bfc 591 Gene3D G3DSA:1.10.390.10 336 483 6.0E-42 T 29-03-2018 CVS42_RS17820 b8ab44b443ded67d486c4fbda7a33bfc 591 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 51 99 9.5E-10 T 29-03-2018 IPR011096 FTP domain CVS42_RS17820 b8ab44b443ded67d486c4fbda7a33bfc 591 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 196 331 5.7E-37 T 29-03-2018 IPR013856 Peptidase M4 domain GO:0004222 CVS42_RS17820 b8ab44b443ded67d486c4fbda7a33bfc 591 Gene3D G3DSA:3.10.170.10 186 335 1.1E-43 T 29-03-2018 CVS42_RS17820 b8ab44b443ded67d486c4fbda7a33bfc 591 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 334 478 1.4E-34 T 29-03-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 CVS42_RS17820 b8ab44b443ded67d486c4fbda7a33bfc 591 Pfam PF03413 Peptidase propeptide and YPEB domain 115 180 2.2E-8 T 29-03-2018 IPR025711 PepSY domain CVS42_RS17820 b8ab44b443ded67d486c4fbda7a33bfc 591 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 512 577 7.3E-16 T 29-03-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial CVS42_RS17820 b8ab44b443ded67d486c4fbda7a33bfc 591 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 288 308 2.9E-27 T 29-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CVS42_RS17820 b8ab44b443ded67d486c4fbda7a33bfc 591 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 405 421 2.9E-27 T 29-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CVS42_RS17820 b8ab44b443ded67d486c4fbda7a33bfc 591 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 322 338 2.9E-27 T 29-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CVS42_RS17820 b8ab44b443ded67d486c4fbda7a33bfc 591 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 343 354 2.9E-27 T 29-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CVS42_RS03990 efa2b6b27da00ab0775f9a836333c5bc 223 Gene3D G3DSA:3.10.50.40 1 205 4.4E-22 T 29-03-2018 CVS42_RS03990 efa2b6b27da00ab0775f9a836333c5bc 223 SUPERFAMILY SSF54534 3 139 2.36E-32 T 29-03-2018 CVS42_RS03990 efa2b6b27da00ab0775f9a836333c5bc 223 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 134 6.6E-8 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CVS42_RS03270 48a4f199d71a1c59ee7e86790f288cc2 159 Pfam PF07308 Protein of unknown function (DUF1456) 3 76 2.4E-28 T 29-03-2018 IPR009921 Domain of unknown function DUF1456 CVS42_RS03270 48a4f199d71a1c59ee7e86790f288cc2 159 Pfam PF07308 Protein of unknown function (DUF1456) 92 159 1.6E-25 T 29-03-2018 IPR009921 Domain of unknown function DUF1456 CVS42_RS10335 8f24c840eba39bc0828d3430bb451d30 330 Pfam PF00092 von Willebrand factor type A domain 78 270 4.7E-19 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS10335 8f24c840eba39bc0828d3430bb451d30 330 SMART SM00327 76 277 1.9E-24 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS10335 8f24c840eba39bc0828d3430bb451d30 330 SUPERFAMILY SSF53300 76 270 1.44E-32 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS10335 8f24c840eba39bc0828d3430bb451d30 330 Gene3D G3DSA:3.40.50.410 70 294 8.0E-39 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS07760 5ab3c7217e391a1d67178b82c8f9cbfc 287 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 3.2E-136 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CVS42_RS07760 5ab3c7217e391a1d67178b82c8f9cbfc 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 3.6E-37 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CVS42_RS07760 5ab3c7217e391a1d67178b82c8f9cbfc 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 3.6E-37 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CVS42_RS07760 5ab3c7217e391a1d67178b82c8f9cbfc 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 3.6E-37 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CVS42_RS07760 5ab3c7217e391a1d67178b82c8f9cbfc 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 3.6E-37 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CVS42_RS07760 5ab3c7217e391a1d67178b82c8f9cbfc 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 3.6E-37 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CVS42_RS07760 5ab3c7217e391a1d67178b82c8f9cbfc 287 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 36.92 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CVS42_RS07760 5ab3c7217e391a1d67178b82c8f9cbfc 287 Pfam PF01039 Carboxyl transferase domain 99 240 1.9E-14 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 CVS42_RS07760 5ab3c7217e391a1d67178b82c8f9cbfc 287 SUPERFAMILY SSF52096 25 284 1.03E-85 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS07760 5ab3c7217e391a1d67178b82c8f9cbfc 287 Gene3D G3DSA:3.90.226.10 13 284 4.0E-67 T 29-03-2018 CVS42_RS21075 32255494dcd43c4ce48938f133498a99 314 Gene3D G3DSA:3.40.50.170 1 208 2.2E-70 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CVS42_RS21075 32255494dcd43c4ce48938f133498a99 314 Pfam PF00551 Formyl transferase 7 183 6.1E-52 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CVS42_RS21075 32255494dcd43c4ce48938f133498a99 314 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 310 1.3E-105 T 29-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CVS42_RS21075 32255494dcd43c4ce48938f133498a99 314 Gene3D G3DSA:3.10.25.10 209 314 9.6E-31 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CVS42_RS21075 32255494dcd43c4ce48938f133498a99 314 SUPERFAMILY SSF50486 207 309 2.51E-34 T 29-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CVS42_RS21075 32255494dcd43c4ce48938f133498a99 314 Pfam PF02911 Formyl transferase, C-terminal domain 206 303 7.8E-30 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CVS42_RS21075 32255494dcd43c4ce48938f133498a99 314 SUPERFAMILY SSF53328 3 206 2.35E-67 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CVS42_RS21075 32255494dcd43c4ce48938f133498a99 314 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 29-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CVS42_RS21075 32255494dcd43c4ce48938f133498a99 314 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 4 306 37.029 T 29-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CVS42_RS04520 891d938fdc24108edfe6fd47a8ff8765 477 SMART SM00729 147 367 2.8E-66 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CVS42_RS04520 891d938fdc24108edfe6fd47a8ff8765 477 Gene3D G3DSA:3.80.30.20 144 381 2.8E-55 T 29-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe CVS42_RS04520 891d938fdc24108edfe6fd47a8ff8765 477 Pfam PF01938 TRAM domain 378 439 6.0E-17 T 29-03-2018 IPR002792 TRAM domain CVS42_RS04520 891d938fdc24108edfe6fd47a8ff8765 477 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 1.8E-153 T 29-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CVS42_RS04520 891d938fdc24108edfe6fd47a8ff8765 477 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CVS42_RS04520 891d938fdc24108edfe6fd47a8ff8765 477 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.9E-30 T 29-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CVS42_RS04520 891d938fdc24108edfe6fd47a8ff8765 477 Pfam PF04055 Radical SAM superfamily 151 325 1.4E-27 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS04520 891d938fdc24108edfe6fd47a8ff8765 477 SUPERFAMILY SSF102114 129 372 2.09E-64 T 29-03-2018 CVS42_RS04520 891d938fdc24108edfe6fd47a8ff8765 477 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 439 4.4E-200 T 29-03-2018 CVS42_RS04520 891d938fdc24108edfe6fd47a8ff8765 477 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 74.778 T 29-03-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CVS42_RS05650 e6962469723c4dba5a075e784c4945f6 194 SUPERFAMILY SSF46609 1 84 1.44E-35 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS05650 e6962469723c4dba5a075e784c4945f6 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.7E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS05650 e6962469723c4dba5a075e784c4945f6 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.7E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS05650 e6962469723c4dba5a075e784c4945f6 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.7E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS05650 e6962469723c4dba5a075e784c4945f6 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.7E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS05650 e6962469723c4dba5a075e784c4945f6 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.7E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS05650 e6962469723c4dba5a075e784c4945f6 194 SUPERFAMILY SSF54719 84 193 4.45E-43 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS05650 e6962469723c4dba5a075e784c4945f6 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 29-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS05650 e6962469723c4dba5a075e784c4945f6 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 6.2E-37 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS05650 e6962469723c4dba5a075e784c4945f6 194 PIRSF PIRSF000349 1 194 7.1E-84 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS05650 e6962469723c4dba5a075e784c4945f6 194 Gene3D G3DSA:1.10.287.990 20 82 2.4E-26 T 29-03-2018 CVS42_RS05650 e6962469723c4dba5a075e784c4945f6 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 7.7E-35 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS21770 6d5a0c39a005222668a4b053fed5da6f 307 Gene3D G3DSA:1.20.58.180 216 294 1.6E-32 T 29-03-2018 CVS42_RS21770 6d5a0c39a005222668a4b053fed5da6f 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CVS42_RS21770 6d5a0c39a005222668a4b053fed5da6f 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CVS42_RS21770 6d5a0c39a005222668a4b053fed5da6f 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CVS42_RS21770 6d5a0c39a005222668a4b053fed5da6f 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CVS42_RS21770 6d5a0c39a005222668a4b053fed5da6f 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CVS42_RS21770 6d5a0c39a005222668a4b053fed5da6f 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CVS42_RS21770 6d5a0c39a005222668a4b053fed5da6f 307 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.711 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CVS42_RS21770 6d5a0c39a005222668a4b053fed5da6f 307 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 300 3.6E-176 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CVS42_RS21770 6d5a0c39a005222668a4b053fed5da6f 307 SUPERFAMILY SSF55681 8 292 7.21E-134 T 29-03-2018 CVS42_RS21770 6d5a0c39a005222668a4b053fed5da6f 307 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 1.6E-150 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CVS42_RS21770 6d5a0c39a005222668a4b053fed5da6f 307 Gene3D G3DSA:3.30.930.10 1 214 8.1E-88 T 29-03-2018 CVS42_RS11580 f1032e22ebc5a89a92995f144e6335d8 308 SUPERFAMILY SSF52402 2 180 4.67E-46 T 29-03-2018 CVS42_RS11580 f1032e22ebc5a89a92995f144e6335d8 308 PIRSF PIRSF000089 1 308 4.1E-103 T 29-03-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CVS42_RS11580 f1032e22ebc5a89a92995f144e6335d8 308 Gene3D G3DSA:3.40.50.1220 184 308 2.5E-58 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CVS42_RS11580 f1032e22ebc5a89a92995f144e6335d8 308 Pfam PF01012 Electron transfer flavoprotein domain 3 169 4.3E-34 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CVS42_RS11580 f1032e22ebc5a89a92995f144e6335d8 308 Gene3D G3DSA:3.40.50.620 1 179 6.3E-38 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS11580 f1032e22ebc5a89a92995f144e6335d8 308 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 252 278 - T 29-03-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 CVS42_RS11580 f1032e22ebc5a89a92995f144e6335d8 308 SUPERFAMILY SSF52467 188 308 4.03E-46 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CVS42_RS11580 f1032e22ebc5a89a92995f144e6335d8 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 3.4E-35 T 29-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CVS42_RS11580 f1032e22ebc5a89a92995f144e6335d8 308 SMART SM00893 3 181 2.7E-38 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CVS42_RS13920 ca7487c78955ae255dde96340c9cf804 553 SUPERFAMILY SSF52374 9 336 1.89E-103 T 29-03-2018 CVS42_RS13920 ca7487c78955ae255dde96340c9cf804 553 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 27 336 3.3E-127 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CVS42_RS13920 ca7487c78955ae255dde96340c9cf804 553 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 339 527 3.3E-61 T 29-03-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CVS42_RS13920 ca7487c78955ae255dde96340c9cf804 553 Gene3D G3DSA:3.40.50.620 27 151 4.3E-40 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS13920 ca7487c78955ae255dde96340c9cf804 553 Gene3D G3DSA:3.40.50.620 154 259 1.7E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS13920 ca7487c78955ae255dde96340c9cf804 553 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 27 550 4.6E-293 T 29-03-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CVS42_RS13920 ca7487c78955ae255dde96340c9cf804 553 Gene3D G3DSA:2.40.240.10 343 461 9.7E-46 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CVS42_RS13920 ca7487c78955ae255dde96340c9cf804 553 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 548 53.162 T 29-03-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 CVS42_RS13920 ca7487c78955ae255dde96340c9cf804 553 SUPERFAMILY SSF50715 339 547 8.37E-76 T 29-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CVS42_RS13920 ca7487c78955ae255dde96340c9cf804 553 Gene3D G3DSA:1.10.1160.10 260 337 1.6E-36 T 29-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CVS42_RS13920 ca7487c78955ae255dde96340c9cf804 553 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 33 44 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS13920 ca7487c78955ae255dde96340c9cf804 553 PRINTS PR00987 Glutamyl-tRNA synthetase signature 209 219 7.4E-10 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CVS42_RS13920 ca7487c78955ae255dde96340c9cf804 553 PRINTS PR00987 Glutamyl-tRNA synthetase signature 30 42 7.4E-10 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CVS42_RS13920 ca7487c78955ae255dde96340c9cf804 553 PRINTS PR00987 Glutamyl-tRNA synthetase signature 44 55 7.4E-10 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CVS42_RS13920 ca7487c78955ae255dde96340c9cf804 553 PRINTS PR00987 Glutamyl-tRNA synthetase signature 59 72 7.4E-10 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CVS42_RS13920 ca7487c78955ae255dde96340c9cf804 553 Gene3D G3DSA:2.40.240.10 462 546 2.0E-33 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CVS42_RS20760 76453ec73100eb147b55cb2052d44bb1 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 6.1E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS20760 76453ec73100eb147b55cb2052d44bb1 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 423 6.1E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS20760 76453ec73100eb147b55cb2052d44bb1 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 430 6.4E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS20760 76453ec73100eb147b55cb2052d44bb1 449 SUPERFAMILY SSF55874 309 443 2.23E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS20760 76453ec73100eb147b55cb2052d44bb1 449 SMART SM00387 339 445 9.9E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS20760 76453ec73100eb147b55cb2052d44bb1 449 Gene3D G3DSA:3.30.565.10 219 443 1.3E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS09160 98df7d3f20e2b9eea7dab35302628d48 461 Pfam PF03315 Serine dehydratase beta chain 3 156 1.3E-58 T 29-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CVS42_RS09160 98df7d3f20e2b9eea7dab35302628d48 461 SUPERFAMILY SSF143548 16 158 1.41E-46 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CVS42_RS09160 98df7d3f20e2b9eea7dab35302628d48 461 Gene3D G3DSA:1.10.4100.10 274 451 8.6E-35 T 29-03-2018 CVS42_RS09160 98df7d3f20e2b9eea7dab35302628d48 461 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 458 1.7E-214 T 29-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CVS42_RS09160 98df7d3f20e2b9eea7dab35302628d48 461 Gene3D G3DSA:3.30.1330.90 10 159 2.1E-56 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CVS42_RS09160 98df7d3f20e2b9eea7dab35302628d48 461 Pfam PF03313 Serine dehydratase alpha chain 191 455 9.1E-103 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CVS42_RS07775 8258f8d988f13983bc9758fab49d9711 105 Pfam PF01906 Putative heavy-metal-binding 1 105 7.7E-41 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 CVS42_RS07775 8258f8d988f13983bc9758fab49d9711 105 Gene3D G3DSA:3.30.110.70 1 105 7.0E-38 T 29-03-2018 IPR035439 Uncharacterised protein family UPF0145/C2CD5 Reactome: R-HSA-1445148 CVS42_RS07775 8258f8d988f13983bc9758fab49d9711 105 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.987 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 CVS42_RS07775 8258f8d988f13983bc9758fab49d9711 105 SUPERFAMILY SSF117782 1 105 1.96E-39 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 CVS42_RS03745 36d708795fff02daa57b21e4c4a5e01f 89 Pfam PF03937 Flavinator of succinate dehydrogenase 8 77 7.6E-26 T 29-03-2018 IPR005631 Flavinator of succinate dehydrogenase CVS42_RS03745 36d708795fff02daa57b21e4c4a5e01f 89 SUPERFAMILY SSF109910 2 79 8.24E-27 T 29-03-2018 IPR005631 Flavinator of succinate dehydrogenase CVS42_RS03745 36d708795fff02daa57b21e4c4a5e01f 89 Gene3D G3DSA:1.10.150.250 2 86 4.4E-25 T 29-03-2018 CVS42_RS10720 2804facc07cfe4e8101bbc35f3e3d3bc 468 Pfam PF04932 O-Antigen ligase 236 373 6.5E-18 T 29-03-2018 IPR007016 O-antigen ligase-related CVS42_RS07545 787e394072b2c9824538f981d13de21a 188 PIRSF PIRSF000239 1 188 3.5E-55 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CVS42_RS07545 787e394072b2c9824538f981d13de21a 188 Pfam PF00578 AhpC/TSA family 7 133 3.6E-37 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CVS42_RS07545 787e394072b2c9824538f981d13de21a 188 Gene3D G3DSA:3.40.30.10 3 154 6.6E-36 T 29-03-2018 CVS42_RS07545 787e394072b2c9824538f981d13de21a 188 TIGRFAM TIGR03137 AhpC: peroxiredoxin 4 188 8.7E-106 T 29-03-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CVS42_RS07545 787e394072b2c9824538f981d13de21a 188 Gene3D G3DSA:3.30.1020.10 155 184 2.3E-10 T 29-03-2018 CVS42_RS07545 787e394072b2c9824538f981d13de21a 188 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 157 182 1.8E-6 T 29-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CVS42_RS07545 787e394072b2c9824538f981d13de21a 188 SUPERFAMILY SSF52833 5 187 5.43E-59 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS18850 c3d82b831ce6402202ff31f8d25bfd85 285 SUPERFAMILY SSF53955 5 152 4.36E-31 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS18850 c3d82b831ce6402202ff31f8d25bfd85 285 Gene3D G3DSA:1.10.530.10 2 157 1.8E-28 T 29-03-2018 CVS42_RS18850 c3d82b831ce6402202ff31f8d25bfd85 285 Pfam PF01464 Transglycosylase SLT domain 26 132 2.6E-20 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CVS42_RS19755 c8952d1e6b40d9134a3b90d909fc5d5f 163 SUPERFAMILY SSF142433 5 162 1.83E-56 T 29-03-2018 IPR008136 CinA, C-terminal CVS42_RS19755 c8952d1e6b40d9134a3b90d909fc5d5f 163 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 159 7.5E-52 T 29-03-2018 IPR008136 CinA, C-terminal CVS42_RS19755 c8952d1e6b40d9134a3b90d909fc5d5f 163 Gene3D G3DSA:3.90.950.20 2 163 6.0E-59 T 29-03-2018 CVS42_RS19755 c8952d1e6b40d9134a3b90d909fc5d5f 163 Pfam PF02464 Competence-damaged protein 9 161 5.1E-58 T 29-03-2018 IPR008136 CinA, C-terminal CVS42_RS07580 866afbadfd2f13fe03a8af0eff771307 122 Pfam PF00581 Rhodanese-like domain 25 115 1.6E-14 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS07580 866afbadfd2f13fe03a8af0eff771307 122 SUPERFAMILY SSF52821 5 122 1.44E-32 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS07580 866afbadfd2f13fe03a8af0eff771307 122 Gene3D G3DSA:3.40.250.10 11 122 1.4E-24 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS07580 866afbadfd2f13fe03a8af0eff771307 122 SMART SM00450 18 119 8.8E-17 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS04005 70cefac30438ce5e6bbadf7e7fdfa377 267 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 169 255 1.4E-27 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CVS42_RS04005 70cefac30438ce5e6bbadf7e7fdfa377 267 Gene3D G3DSA:3.10.50.40 143 259 2.5E-43 T 29-03-2018 CVS42_RS04005 70cefac30438ce5e6bbadf7e7fdfa377 267 Gene3D G3DSA:1.10.287.460 35 142 9.8E-29 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CVS42_RS04005 70cefac30438ce5e6bbadf7e7fdfa377 267 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 41 161 8.2E-36 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CVS42_RS04005 70cefac30438ce5e6bbadf7e7fdfa377 267 SUPERFAMILY SSF54534 52 257 7.66E-64 T 29-03-2018 CVS42_RS18405 8aeb7ac88dfed35725c5cfc8164afe71 371 Gene3D G3DSA:1.10.10.60 296 348 3.2E-5 T 29-03-2018 CVS42_RS18405 8aeb7ac88dfed35725c5cfc8164afe71 371 Pfam PF05651 Putative sugar diacid recognition 3 136 6.2E-53 T 29-03-2018 IPR008599 Putative sugar diacid recognition CVS42_RS18405 8aeb7ac88dfed35725c5cfc8164afe71 371 Pfam PF13556 PucR C-terminal helix-turn-helix domain 311 368 2.9E-20 T 29-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain CVS42_RS18405 8aeb7ac88dfed35725c5cfc8164afe71 371 Gene3D G3DSA:3.30.450.20 2 99 0.13 T 29-03-2018 CVS42_RS10350 98f904548e10133458c580e202948c26 199 SUPERFAMILY SSF88946 30 120 6.67E-22 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS10350 98f904548e10133458c580e202948c26 199 Pfam PF08281 Sigma-70, region 4 132 182 3.0E-14 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS10350 98f904548e10133458c580e202948c26 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 35 187 1.2E-24 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS10350 98f904548e10133458c580e202948c26 199 Gene3D G3DSA:1.10.1740.10 27 100 1.3E-20 T 29-03-2018 CVS42_RS10350 98f904548e10133458c580e202948c26 199 Gene3D G3DSA:1.10.10.10 101 190 1.8E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS10350 98f904548e10133458c580e202948c26 199 SUPERFAMILY SSF88659 125 188 6.17E-15 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS10350 98f904548e10133458c580e202948c26 199 Pfam PF04542 Sigma-70 region 2 39 105 3.4E-16 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS09250 604173a39020d561164848cb2937c415 334 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 156 253 7.9E-9 T 29-03-2018 IPR024534 Domain of unknown function DUF2220 CVS42_RS19525 fa4fdeb4a202d39a2cba28f9e66d9ee0 342 Pfam PF08468 Methyltransferase small domain N-terminal 9 165 2.8E-47 T 29-03-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS19525 fa4fdeb4a202d39a2cba28f9e66d9ee0 342 Gene3D G3DSA:3.40.50.150 168 341 2.2E-25 T 29-03-2018 CVS42_RS19525 fa4fdeb4a202d39a2cba28f9e66d9ee0 342 Pfam PF05175 Methyltransferase small domain 173 338 3.9E-55 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CVS42_RS19525 fa4fdeb4a202d39a2cba28f9e66d9ee0 342 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 271 277 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CVS42_RS19525 fa4fdeb4a202d39a2cba28f9e66d9ee0 342 SUPERFAMILY SSF53335 165 321 8.15E-25 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS19525 fa4fdeb4a202d39a2cba28f9e66d9ee0 342 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 5 342 44.135 T 29-03-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS14015 d8c815edf18d8742a14862966dca1ca0 277 Gene3D G3DSA:3.90.25.10 161 272 4.3E-7 T 29-03-2018 CVS42_RS14015 d8c815edf18d8742a14862966dca1ca0 277 Gene3D G3DSA:3.40.50.720 4 160 1.7E-15 T 29-03-2018 CVS42_RS14015 d8c815edf18d8742a14862966dca1ca0 277 Pfam PF13460 NAD(P)H-binding 15 187 5.6E-7 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS14015 d8c815edf18d8742a14862966dca1ca0 277 SUPERFAMILY SSF51735 12 263 1.82E-27 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS10370 ef2c33714825aa2e2afba169a9d4f050 407 Gene3D G3DSA:1.10.3210.10 195 353 5.2E-18 T 29-03-2018 CVS42_RS10370 ef2c33714825aa2e2afba169a9d4f050 407 SMART SM00052 1 195 5.4E-5 T 29-03-2018 IPR001633 EAL domain CVS42_RS10370 ef2c33714825aa2e2afba169a9d4f050 407 Gene3D G3DSA:3.20.20.450 3 194 5.0E-25 T 29-03-2018 IPR001633 EAL domain CVS42_RS10370 ef2c33714825aa2e2afba169a9d4f050 407 PIRSF PIRSF003180 1 403 3.3E-148 T 29-03-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing CVS42_RS10370 ef2c33714825aa2e2afba169a9d4f050 407 SUPERFAMILY SSF109604 181 398 2.64E-39 T 29-03-2018 CVS42_RS10370 ef2c33714825aa2e2afba169a9d4f050 407 SUPERFAMILY SSF141868 4 201 7.85E-32 T 29-03-2018 IPR001633 EAL domain CVS42_RS10370 ef2c33714825aa2e2afba169a9d4f050 407 Pfam PF00563 EAL domain 40 190 1.2E-17 T 29-03-2018 IPR001633 EAL domain CVS42_RS10370 ef2c33714825aa2e2afba169a9d4f050 407 Pfam PF08668 HDOD domain 202 319 2.6E-13 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD CVS42_RS19430 1049395d84a40ea5e2431d747c98fcb8 1461 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 691 726 7.4E-5 T 29-03-2018 IPR006530 YD repeat CVS42_RS19430 1049395d84a40ea5e2431d747c98fcb8 1461 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 821 860 7.8E-4 T 29-03-2018 IPR006530 YD repeat CVS42_RS19430 1049395d84a40ea5e2431d747c98fcb8 1461 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 502 537 0.0021 T 29-03-2018 IPR006530 YD repeat CVS42_RS19430 1049395d84a40ea5e2431d747c98fcb8 1461 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1127 1158 5.8E-4 T 29-03-2018 IPR006530 YD repeat CVS42_RS19430 1049395d84a40ea5e2431d747c98fcb8 1461 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 756 796 0.0026 T 29-03-2018 IPR006530 YD repeat CVS42_RS19430 1049395d84a40ea5e2431d747c98fcb8 1461 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 607 646 4.9E-4 T 29-03-2018 IPR006530 YD repeat CVS42_RS19430 1049395d84a40ea5e2431d747c98fcb8 1461 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 571 604 3.4E-5 T 29-03-2018 IPR006530 YD repeat CVS42_RS19430 1049395d84a40ea5e2431d747c98fcb8 1461 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 1346 1437 5.0E-17 T 29-03-2018 IPR032871 AHH domain-containing protein CVS42_RS19430 1049395d84a40ea5e2431d747c98fcb8 1461 Pfam PF05593 RHS Repeat 502 537 3.8E-5 T 29-03-2018 IPR031325 RHS repeat CVS42_RS19430 1049395d84a40ea5e2431d747c98fcb8 1461 Pfam PF05593 RHS Repeat 669 707 1.2E-5 T 29-03-2018 IPR031325 RHS repeat CVS42_RS19430 1049395d84a40ea5e2431d747c98fcb8 1461 Pfam PF05593 RHS Repeat 691 726 3.2E-5 T 29-03-2018 IPR031325 RHS repeat CVS42_RS19430 1049395d84a40ea5e2431d747c98fcb8 1461 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1266 1339 1.1E-20 T 29-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 CVS42_RS19430 1049395d84a40ea5e2431d747c98fcb8 1461 Pfam PF05488 PAAR motif 130 192 1.4E-15 T 29-03-2018 IPR008727 PAAR motif CVS42_RS19430 1049395d84a40ea5e2431d747c98fcb8 1461 Gene3D G3DSA:2.130.10.10 341 1175 0.0014 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CVS42_RS19430 1049395d84a40ea5e2431d747c98fcb8 1461 SUPERFAMILY SSF69304 789 841 1.83E-6 T 29-03-2018 CVS42_RS19430 1049395d84a40ea5e2431d747c98fcb8 1461 SUPERFAMILY SSF69304 608 684 1.83E-6 T 29-03-2018 CVS42_RS19910 a5ecb092fd3eecaff83c9c39d607058d 89 Pfam PF11656 YjbD family (DUF3811) 1 89 3.3E-25 T 29-03-2018 IPR020317 Uncharacterised protein family YjbD CVS42_RS19910 a5ecb092fd3eecaff83c9c39d607058d 89 Gene3D G3DSA:3.30.70.1530 1 75 0.001 T 29-03-2018 CVS42_RS04055 507b476cea04b4484cca01c4b2c4d00b 139 Pfam PF01894 Uncharacterised protein family UPF0047 29 135 3.7E-35 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CVS42_RS04055 507b476cea04b4484cca01c4b2c4d00b 139 Gene3D G3DSA:2.60.120.460 1 139 4.9E-56 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CVS42_RS04055 507b476cea04b4484cca01c4b2c4d00b 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 8 139 9.7E-42 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CVS42_RS04055 507b476cea04b4484cca01c4b2c4d00b 139 PIRSF PIRSF004681 1 139 9.2E-44 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CVS42_RS04055 507b476cea04b4484cca01c4b2c4d00b 139 SUPERFAMILY SSF111038 1 139 6.54E-46 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CVS42_RS04055 507b476cea04b4484cca01c4b2c4d00b 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CVS42_RS13835 55f4405ae8bb487c2a3b172dd9c5d497 193 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 59 107 2.0E-8 T 29-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CVS42_RS13835 55f4405ae8bb487c2a3b172dd9c5d497 193 SUPERFAMILY SSF69118 1 176 2.22E-43 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CVS42_RS13835 55f4405ae8bb487c2a3b172dd9c5d497 193 Gene3D G3DSA:1.20.1290.10 34 179 1.1E-33 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CVS42_RS13835 55f4405ae8bb487c2a3b172dd9c5d497 193 Pfam PF02627 Carboxymuconolactone decarboxylase family 40 123 2.0E-12 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CVS42_RS05890 10ccdc82e1d1228daf9a106421a9c4b6 612 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 39 510 6.8E-174 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CVS42_RS05890 10ccdc82e1d1228daf9a106421a9c4b6 612 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 455 488 - T 29-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 CVS42_RS05890 10ccdc82e1d1228daf9a106421a9c4b6 612 Pfam PF03958 Bacterial type II/III secretion system short domain 188 280 1.4E-18 T 29-03-2018 IPR005644 NolW-like CVS42_RS05890 10ccdc82e1d1228daf9a106421a9c4b6 612 Pfam PF03958 Bacterial type II/III secretion system short domain 115 175 2.4E-6 T 29-03-2018 IPR005644 NolW-like CVS42_RS05890 10ccdc82e1d1228daf9a106421a9c4b6 612 Pfam PF00263 Bacterial type II and III secretion system protein 350 510 9.7E-42 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 CVS42_RS05890 10ccdc82e1d1228daf9a106421a9c4b6 612 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 397 412 3.3E-38 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CVS42_RS05890 10ccdc82e1d1228daf9a106421a9c4b6 612 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 283 303 3.3E-38 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CVS42_RS05890 10ccdc82e1d1228daf9a106421a9c4b6 612 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 488 507 3.3E-38 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CVS42_RS05890 10ccdc82e1d1228daf9a106421a9c4b6 612 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 363 382 3.3E-38 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CVS42_RS05890 10ccdc82e1d1228daf9a106421a9c4b6 612 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 199 216 3.3E-38 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CVS42_RS18530 59ccc8927970a041ff48a9e4f43ac1af 416 Pfam PF13641 Glycosyltransferase like family 2 52 273 2.7E-38 T 29-03-2018 CVS42_RS18530 59ccc8927970a041ff48a9e4f43ac1af 416 Gene3D G3DSA:3.90.550.10 31 308 5.8E-59 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS18530 59ccc8927970a041ff48a9e4f43ac1af 416 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 10 409 2.8E-195 T 29-03-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 CVS42_RS18530 59ccc8927970a041ff48a9e4f43ac1af 416 ProDom PD339107 ALGINATE ALG8 BIOSYNTHESIS TRANSFERASE TRANSMEMBRANE MEMBRANE 2.4.1.- GLYCOSYL GLYCOSYLTRANSFERASE PRECURSOR 44 255 7.0E-5 T 29-03-2018 CVS42_RS18530 59ccc8927970a041ff48a9e4f43ac1af 416 SUPERFAMILY SSF53448 49 316 6.26E-62 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS20630 ce9da74d01bc53d75f5ff61ab31b7010 1434 SMART SM00663 235 514 3.7E-183 T 29-03-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20630 ce9da74d01bc53d75f5ff61ab31b7010 1434 Gene3D G3DSA:2.40.50.100 1180 1240 1.1E-16 T 29-03-2018 CVS42_RS20630 ce9da74d01bc53d75f5ff61ab31b7010 1434 Pfam PF04998 RNA polymerase Rpb1, domain 5 792 1343 1.9E-77 T 29-03-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20630 ce9da74d01bc53d75f5ff61ab31b7010 1434 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 670 4.8E-28 T 29-03-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20630 ce9da74d01bc53d75f5ff61ab31b7010 1434 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 7.6E-88 T 29-03-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20630 ce9da74d01bc53d75f5ff61ab31b7010 1434 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1401 18.885 T 29-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20630 ce9da74d01bc53d75f5ff61ab31b7010 1434 Gene3D G3DSA:2.40.40.20 346 488 4.7E-40 T 29-03-2018 CVS42_RS20630 ce9da74d01bc53d75f5ff61ab31b7010 1434 SUPERFAMILY SSF64484 1160 1391 0.0 T 29-03-2018 CVS42_RS20630 ce9da74d01bc53d75f5ff61ab31b7010 1434 SUPERFAMILY SSF64484 16 971 0.0 T 29-03-2018 CVS42_RS20630 ce9da74d01bc53d75f5ff61ab31b7010 1434 Gene3D G3DSA:2.40.50.100 934 1048 2.1E-30 T 29-03-2018 CVS42_RS20630 ce9da74d01bc53d75f5ff61ab31b7010 1434 Gene3D G3DSA:2.40.50.100 1049 1153 5.0E-13 T 29-03-2018 CVS42_RS20630 ce9da74d01bc53d75f5ff61ab31b7010 1434 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1060 0.0 T 29-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20630 ce9da74d01bc53d75f5ff61ab31b7010 1434 Pfam PF05000 RNA polymerase Rpb1, domain 4 700 785 1.1E-18 T 29-03-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20630 ce9da74d01bc53d75f5ff61ab31b7010 1434 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 2.1E-27 T 29-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS20630 ce9da74d01bc53d75f5ff61ab31b7010 1434 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 394 8.7E-8 T 29-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CVS42_RS08945 7e67d745a24f778c72da801d665bb87e 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site CVS42_RS08945 7e67d745a24f778c72da801d665bb87e 403 Gene3D G3DSA:3.40.47.10 4 257 1.0E-59 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS08945 7e67d745a24f778c72da801d665bb87e 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 4.2E-29 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CVS42_RS08945 7e67d745a24f778c72da801d665bb87e 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 8.0E-43 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CVS42_RS08945 7e67d745a24f778c72da801d665bb87e 403 SMART SM00825 Beta-ketoacyl synthase 4 403 1.5E-12 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CVS42_RS08945 7e67d745a24f778c72da801d665bb87e 403 Gene3D G3DSA:3.40.47.10 258 401 1.6E-40 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS08945 7e67d745a24f778c72da801d665bb87e 403 SUPERFAMILY SSF53901 213 400 1.07E-60 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS08945 7e67d745a24f778c72da801d665bb87e 403 SUPERFAMILY SSF53901 1 251 3.17E-65 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS19375 59cc7901cd558a5d2605921871272a6f 351 Gene3D G3DSA:2.40.160.10 6 351 1.1E-47 T 29-03-2018 CVS42_RS19375 59cc7901cd558a5d2605921871272a6f 351 Pfam PF13609 Gram-negative porin 6 325 9.6E-31 T 29-03-2018 CVS42_RS19375 59cc7901cd558a5d2605921871272a6f 351 SUPERFAMILY SSF56935 20 351 5.19E-52 T 29-03-2018 CVS42_RS21190 27f14cfa25e7572abcdda7c9cab052dd 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 499 2.4E-35 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS21190 27f14cfa25e7572abcdda7c9cab052dd 539 SMART SM00304 205 257 2.9E-5 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS21190 27f14cfa25e7572abcdda7c9cab052dd 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 447 476 4.6E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS21190 27f14cfa25e7572abcdda7c9cab052dd 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 293 322 4.6E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS21190 27f14cfa25e7572abcdda7c9cab052dd 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 399 428 4.6E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS21190 27f14cfa25e7572abcdda7c9cab052dd 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 370 397 4.6E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS21190 27f14cfa25e7572abcdda7c9cab052dd 539 Gene3D G3DSA:1.10.287.950 303 522 5.4E-41 T 29-03-2018 CVS42_RS21190 27f14cfa25e7572abcdda7c9cab052dd 539 SMART SM00283 272 533 1.0E-40 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS21190 27f14cfa25e7572abcdda7c9cab052dd 539 SUPERFAMILY SSF58104 228 534 1.57E-56 T 29-03-2018 CVS42_RS21190 27f14cfa25e7572abcdda7c9cab052dd 539 Gene3D G3DSA:1.10.287.950 34 302 2.0E-6 T 29-03-2018 CVS42_RS13270 f8939bc6704bbde7a3e54944e940a5db 116 Pfam PF01230 HIT domain 12 108 2.8E-28 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CVS42_RS13270 f8939bc6704bbde7a3e54944e940a5db 116 SUPERFAMILY SSF54197 2 112 2.32E-33 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CVS42_RS13270 f8939bc6704bbde7a3e54944e940a5db 116 PRINTS PR00332 Histidine triad family signature 6 22 1.8E-18 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CVS42_RS13270 f8939bc6704bbde7a3e54944e940a5db 116 PRINTS PR00332 Histidine triad family signature 27 45 1.8E-18 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CVS42_RS13270 f8939bc6704bbde7a3e54944e940a5db 116 PRINTS PR00332 Histidine triad family signature 95 105 1.8E-18 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CVS42_RS13270 f8939bc6704bbde7a3e54944e940a5db 116 Gene3D G3DSA:3.30.428.10 1 109 2.2E-27 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CVS42_RS13270 f8939bc6704bbde7a3e54944e940a5db 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 29-03-2018 IPR019808 Histidine triad, conserved site CVS42_RS19335 8f518260b23ce89f325701a72d5a693e 217 SUPERFAMILY SSF53474 6 215 2.7E-42 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS19335 8f518260b23ce89f325701a72d5a693e 217 Pfam PF02230 Phospholipase/Carboxylesterase 9 211 6.7E-41 T 29-03-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 CVS42_RS19335 8f518260b23ce89f325701a72d5a693e 217 Gene3D G3DSA:3.40.50.1820 4 215 5.8E-27 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS16695 94b8b803cf020ae454fb5c5946ac9e3e 83 PIRSF PIRSF006488 1 82 1.6E-19 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CVS42_RS16695 94b8b803cf020ae454fb5c5946ac9e3e 83 Gene3D G3DSA:1.10.287.1040 8 76 2.7E-22 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CVS42_RS16695 94b8b803cf020ae454fb5c5946ac9e3e 83 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 51 4.0E-12 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CVS42_RS16695 94b8b803cf020ae454fb5c5946ac9e3e 83 Pfam PF02609 Exonuclease VII small subunit 11 62 1.3E-18 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CVS42_RS16695 94b8b803cf020ae454fb5c5946ac9e3e 83 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.052 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CVS42_RS16695 94b8b803cf020ae454fb5c5946ac9e3e 83 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 2.6E-21 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CVS42_RS16695 94b8b803cf020ae454fb5c5946ac9e3e 83 SUPERFAMILY SSF116842 2 70 2.75E-20 T 29-03-2018 CVS42_RS11570 e85c515d390d7d4ac9a4ae403b0f981e 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 35.596 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CVS42_RS11570 e85c515d390d7d4ac9a4ae403b0f981e 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 2.8E-158 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CVS42_RS11570 e85c515d390d7d4ac9a4ae403b0f981e 427 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 29-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CVS42_RS11570 e85c515d390d7d4ac9a4ae403b0f981e 427 PIRSF PIRSF000505 3 427 1.7E-157 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CVS42_RS11570 e85c515d390d7d4ac9a4ae403b0f981e 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 2.9E-143 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CVS42_RS11570 e85c515d390d7d4ac9a4ae403b0f981e 427 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 29-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CVS42_RS11570 e85c515d390d7d4ac9a4ae403b0f981e 427 SUPERFAMILY SSF55205 1 423 1.44E-144 T 29-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CVS42_RS11570 e85c515d390d7d4ac9a4ae403b0f981e 427 Gene3D G3DSA:3.65.10.10 20 223 1.4E-62 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CVS42_RS11570 e85c515d390d7d4ac9a4ae403b0f981e 427 Gene3D G3DSA:3.65.10.10 224 425 7.4E-67 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CVS42_RS13345 39593c5f6947d4293ed68202bc6923bd 318 SUPERFAMILY SSF52768 20 299 1.06E-75 T 29-03-2018 CVS42_RS13345 39593c5f6947d4293ed68202bc6923bd 318 Pfam PF00850 Histone deacetylase domain 62 297 2.5E-47 T 29-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CVS42_RS13345 39593c5f6947d4293ed68202bc6923bd 318 PRINTS PR01270 Histone deacetylase superfamily signature 168 183 6.6E-16 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CVS42_RS13345 39593c5f6947d4293ed68202bc6923bd 318 PRINTS PR01270 Histone deacetylase superfamily signature 134 157 6.6E-16 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CVS42_RS13345 39593c5f6947d4293ed68202bc6923bd 318 PRINTS PR01270 Histone deacetylase superfamily signature 242 252 6.6E-16 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CVS42_RS13345 39593c5f6947d4293ed68202bc6923bd 318 Gene3D G3DSA:3.40.800.20 20 310 1.1E-59 T 29-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CVS42_RS21945 8eea4be16b5d7b0947a07b987f13e2ae 727 Gene3D G3DSA:2.60.40.10 430 506 1.2E-18 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS21945 8eea4be16b5d7b0947a07b987f13e2ae 727 SMART SM00636 35 318 0.0039 T 29-03-2018 IPR011583 Chitinase II GO:0008061 CVS42_RS21945 8eea4be16b5d7b0947a07b987f13e2ae 727 Gene3D G3DSA:2.60.40.10 350 429 2.2E-14 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS21945 8eea4be16b5d7b0947a07b987f13e2ae 727 SUPERFAMILY SSF51445 33 328 1.2E-58 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS21945 8eea4be16b5d7b0947a07b987f13e2ae 727 SMART SM00495 672 723 5.1E-9 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS21945 8eea4be16b5d7b0947a07b987f13e2ae 727 SMART SM00495 511 556 1.6E-11 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS21945 8eea4be16b5d7b0947a07b987f13e2ae 727 ProSitePatterns PS01095 Chitinases family 18 active site. 147 155 - T 29-03-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CVS42_RS21945 8eea4be16b5d7b0947a07b987f13e2ae 727 Pfam PF00704 Glycosyl hydrolases family 18 37 318 1.4E-33 T 29-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 CVS42_RS21945 8eea4be16b5d7b0947a07b987f13e2ae 727 Gene3D G3DSA:2.10.10.20 510 554 2.4E-17 T 29-03-2018 CVS42_RS21945 8eea4be16b5d7b0947a07b987f13e2ae 727 SUPERFAMILY SSF51055 508 557 1.01E-13 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS21945 8eea4be16b5d7b0947a07b987f13e2ae 727 Pfam PF16403 Domain of unknown function (DUF5011) 357 426 5.8E-15 T 29-03-2018 IPR032179 Domain of unknown function DUF5011 CVS42_RS21945 8eea4be16b5d7b0947a07b987f13e2ae 727 Pfam PF16403 Domain of unknown function (DUF5011) 434 503 1.5E-18 T 29-03-2018 IPR032179 Domain of unknown function DUF5011 CVS42_RS21945 8eea4be16b5d7b0947a07b987f13e2ae 727 Gene3D G3DSA:2.10.10.20 660 725 6.6E-11 T 29-03-2018 CVS42_RS21945 8eea4be16b5d7b0947a07b987f13e2ae 727 Gene3D G3DSA:3.20.20.80 27 344 9.1E-57 T 29-03-2018 CVS42_RS21385 5d10452da84ffad1b79811739a3c410b 128 Gene3D G3DSA:2.40.50.140 24 128 3.7E-32 T 29-03-2018 CVS42_RS21385 5d10452da84ffad1b79811739a3c410b 128 SUPERFAMILY SSF50249 21 127 1.52E-31 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS21385 5d10452da84ffad1b79811739a3c410b 128 Pfam PF01588 Putative tRNA binding domain 31 125 4.7E-29 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CVS42_RS21650 61884c7a2c7971a1cb6f4af181c8cbb3 286 SUPERFAMILY SSF53850 38 244 1.09E-16 T 29-03-2018 CVS42_RS21650 61884c7a2c7971a1cb6f4af181c8cbb3 286 Gene3D G3DSA:3.40.190.10 145 250 7.5E-5 T 29-03-2018 CVS42_RS14375 2832d94ea6d5d5a973e20a4f60287c60 426 Pfam PF02397 Bacterial sugar transferase 238 420 1.1E-63 T 29-03-2018 IPR003362 Bacterial sugar transferase CVS42_RS14375 2832d94ea6d5d5a973e20a4f60287c60 426 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 185 425 2.0E-92 T 29-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CVS42_RS13610 ae6943dcca63377564d38f7367fa9326 274 SUPERFAMILY SSF47757 3 73 1.83E-13 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CVS42_RS13610 ae6943dcca63377564d38f7367fa9326 274 Gene3D G3DSA:1.10.155.10 1 72 8.5E-12 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CVS42_RS13610 ae6943dcca63377564d38f7367fa9326 274 PRINTS PR00996 Glutamate methyltransferase family signature 211 225 5.7E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CVS42_RS13610 ae6943dcca63377564d38f7367fa9326 274 PRINTS PR00996 Glutamate methyltransferase family signature 230 253 5.7E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CVS42_RS13610 ae6943dcca63377564d38f7367fa9326 274 PRINTS PR00996 Glutamate methyltransferase family signature 142 158 5.7E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CVS42_RS13610 ae6943dcca63377564d38f7367fa9326 274 PRINTS PR00996 Glutamate methyltransferase family signature 104 124 5.7E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CVS42_RS13610 ae6943dcca63377564d38f7367fa9326 274 PRINTS PR00996 Glutamate methyltransferase family signature 67 79 5.7E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CVS42_RS13610 ae6943dcca63377564d38f7367fa9326 274 PRINTS PR00996 Glutamate methyltransferase family signature 28 41 5.7E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CVS42_RS13610 ae6943dcca63377564d38f7367fa9326 274 Pfam PF01739 CheR methyltransferase, SAM binding domain 74 268 1.5E-62 T 29-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CVS42_RS13610 ae6943dcca63377564d38f7367fa9326 274 SUPERFAMILY SSF53335 74 269 1.62E-48 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS13610 ae6943dcca63377564d38f7367fa9326 274 Gene3D G3DSA:3.40.50.150 73 272 8.6E-45 T 29-03-2018 CVS42_RS13610 ae6943dcca63377564d38f7367fa9326 274 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 52 4.4E-10 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CVS42_RS13610 ae6943dcca63377564d38f7367fa9326 274 SMART SM00138 6 271 6.8E-110 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CVS42_RS09500 b6e829bbdf2d719f7d94350efd66299c 397 Gene3D G3DSA:3.30.750.80 74 166 1.6E-33 T 29-03-2018 CVS42_RS09500 b6e829bbdf2d719f7d94350efd66299c 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 171 339 4.2E-31 T 29-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CVS42_RS09500 b6e829bbdf2d719f7d94350efd66299c 397 SMART SM00359 3 88 7.3E-13 T 29-03-2018 IPR002478 PUA domain GO:0003723 CVS42_RS09500 b6e829bbdf2d719f7d94350efd66299c 397 SUPERFAMILY SSF53335 79 393 3.85E-78 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS09500 b6e829bbdf2d719f7d94350efd66299c 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 71.888 T 29-03-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CVS42_RS09500 b6e829bbdf2d719f7d94350efd66299c 397 Gene3D G3DSA:3.40.50.150 167 395 4.3E-42 T 29-03-2018 CVS42_RS09500 b6e829bbdf2d719f7d94350efd66299c 397 Gene3D G3DSA:2.30.130.10 4 72 8.8E-24 T 29-03-2018 IPR002478 PUA domain GO:0003723 CVS42_RS09500 b6e829bbdf2d719f7d94350efd66299c 397 SUPERFAMILY SSF88697 4 72 4.75E-17 T 29-03-2018 IPR015947 PUA-like domain CVS42_RS16645 d83ec9f9774b4ab0b2088a67c215bea2 254 Gene3D G3DSA:3.20.20.70 2 254 7.9E-93 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS16645 d83ec9f9774b4ab0b2088a67c215bea2 254 SUPERFAMILY SSF51351 4 250 7.07E-83 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS16645 d83ec9f9774b4ab0b2088a67c215bea2 254 ProSitePatterns PS00171 Triosephosphate isomerase active site. 166 176 - T 29-03-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS16645 d83ec9f9774b4ab0b2088a67c215bea2 254 Pfam PF00121 Triosephosphate isomerase 7 247 2.7E-85 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS16645 d83ec9f9774b4ab0b2088a67c215bea2 254 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 240 2.3E-62 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS16645 d83ec9f9774b4ab0b2088a67c215bea2 254 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 4 250 37.719 T 29-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CVS42_RS15990 84e15b6a5cc99d5cae01b5c95c8da28b 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 8.3E-176 T 29-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS15990 84e15b6a5cc99d5cae01b5c95c8da28b 1159 Gene3D G3DSA:1.10.150.280 785 894 6.4E-12 T 29-03-2018 CVS42_RS15990 84e15b6a5cc99d5cae01b5c95c8da28b 1159 SUPERFAMILY SSF89550 6 263 1.49E-12 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CVS42_RS15990 84e15b6a5cc99d5cae01b5c95c8da28b 1159 Pfam PF01336 OB-fold nucleic acid binding domain 996 1069 1.2E-8 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CVS42_RS15990 84e15b6a5cc99d5cae01b5c95c8da28b 1159 Pfam PF02811 PHP domain 8 171 6.0E-42 T 29-03-2018 IPR004013 PHP domain GO:0003824 CVS42_RS15990 84e15b6a5cc99d5cae01b5c95c8da28b 1159 Gene3D G3DSA:2.40.50.140 976 1073 5.1E-17 T 29-03-2018 CVS42_RS15990 84e15b6a5cc99d5cae01b5c95c8da28b 1159 Pfam PF14579 Helix-hairpin-helix motif 808 897 1.3E-25 T 29-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS15990 84e15b6a5cc99d5cae01b5c95c8da28b 1159 Gene3D G3DSA:3.20.20.140 1 247 3.2E-36 T 29-03-2018 CVS42_RS15990 84e15b6a5cc99d5cae01b5c95c8da28b 1159 SMART SM00481 7 74 1.3E-23 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CVS42_RS15990 84e15b6a5cc99d5cae01b5c95c8da28b 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 29-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.053 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 Gene3D G3DSA:3.30.930.10 229 531 4.8E-123 T 29-03-2018 CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 6.3E-240 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 1.3E-14 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 Gene3D G3DSA:3.10.20.30 1 64 6.8E-19 T 29-03-2018 IPR012675 Beta-grasp domain CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 Gene3D G3DSA:3.40.50.800 532 642 3.2E-27 T 29-03-2018 IPR004154 Anticodon-binding CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 SUPERFAMILY SSF55681 243 525 2.39E-99 T 29-03-2018 CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 SUPERFAMILY SSF52954 529 636 2.42E-32 T 29-03-2018 IPR004154 Anticodon-binding CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 2.0E-54 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 2.0E-54 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 2.0E-54 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 2.0E-54 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 2.0E-54 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 SUPERFAMILY SSF55186 63 241 1.18E-64 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 529 4.4E-49 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 Gene3D G3DSA:3.30.980.10 69 228 2.5E-39 T 29-03-2018 CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 SMART SM00863 170 219 1.4E-19 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 SUPERFAMILY SSF81271 3 61 8.17E-16 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 Pfam PF03129 Anticodon binding domain 541 629 2.1E-21 T 29-03-2018 IPR004154 Anticodon-binding CVS42_RS09600 e6dd63c52bfd7a4a324d6bc278f42125 642 Pfam PF02824 TGS domain 4 61 9.6E-12 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CVS42_RS13180 d55bf290bd7df3ac774c397271d208a2 219 Pfam PF09335 SNARE associated Golgi protein 44 169 7.1E-18 T 29-03-2018 IPR032816 SNARE associated Golgi protein CVS42_RS20840 b6ccde600889aba3f042b9480475f4fe 267 SMART SM00062 33 263 1.4E-6 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS20840 b6ccde600889aba3f042b9480475f4fe 267 Gene3D G3DSA:3.40.190.10 154 266 1.1E-4 T 29-03-2018 CVS42_RS20840 b6ccde600889aba3f042b9480475f4fe 267 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 260 7.8E-19 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS20840 b6ccde600889aba3f042b9480475f4fe 267 Gene3D G3DSA:3.40.190.10 28 153 7.1E-14 T 29-03-2018 CVS42_RS20840 b6ccde600889aba3f042b9480475f4fe 267 SUPERFAMILY SSF53850 38 260 5.43E-30 T 29-03-2018 CVS42_RS14760 b00c8598fefa2ff9831d95c899c6271c 141 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 3.2E-40 T 29-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CVS42_RS14760 b00c8598fefa2ff9831d95c899c6271c 141 SUPERFAMILY SSF52833 4 137 6.51E-40 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS14760 b00c8598fefa2ff9831d95c899c6271c 141 Pfam PF03960 ArsC family 7 114 4.4E-19 T 29-03-2018 IPR006660 Arsenate reductase-like CVS42_RS14760 b00c8598fefa2ff9831d95c899c6271c 141 Gene3D G3DSA:3.40.30.10 1 141 1.2E-45 T 29-03-2018 CVS42_RS19940 1c52584215692f26b4de8cf57dc939c2 360 SUPERFAMILY SSF56796 3 355 3.79E-95 T 29-03-2018 CVS42_RS19940 1c52584215692f26b4de8cf57dc939c2 360 PIRSF PIRSF000112 1 359 2.6E-98 T 29-03-2018 CVS42_RS19940 1c52584215692f26b4de8cf57dc939c2 360 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 1.2E-70 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CVS42_RS19940 1c52584215692f26b4de8cf57dc939c2 360 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CVS42_RS19940 1c52584215692f26b4de8cf57dc939c2 360 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CVS42_RS19940 1c52584215692f26b4de8cf57dc939c2 360 Gene3D G3DSA:1.20.1090.10 160 360 5.2E-42 T 29-03-2018 CVS42_RS19940 1c52584215692f26b4de8cf57dc939c2 360 Gene3D G3DSA:3.40.50.1970 4 159 4.6E-34 T 29-03-2018 CVS42_RS13010 63e9cd03babad6d4e283a98e9aea0c2b 354 Pfam PF11380 Stealth protein CR2, conserved region 2 41 142 5.0E-41 T 29-03-2018 IPR021520 Stealth protein CR2, conserved region 2 GO:0016772 CVS42_RS13010 63e9cd03babad6d4e283a98e9aea0c2b 354 Pfam PF17101 Stealth protein CR1, conserved region 1 7 32 1.3E-12 T 29-03-2018 IPR031358 Stealth protein CR1, conserved region 1 CVS42_RS12965 43f6df9d813e1df783e3aa924a4b8c4c 376 Gene3D G3DSA:3.40.50.2000 216 359 6.1E-33 T 29-03-2018 CVS42_RS12965 43f6df9d813e1df783e3aa924a4b8c4c 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 6 372 8.2E-147 T 29-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 CVS42_RS12965 43f6df9d813e1df783e3aa924a4b8c4c 376 Gene3D G3DSA:3.40.50.2000 5 215 8.4E-69 T 29-03-2018 CVS42_RS12965 43f6df9d813e1df783e3aa924a4b8c4c 376 SUPERFAMILY SSF53756 5 374 2.51E-128 T 29-03-2018 CVS42_RS12965 43f6df9d813e1df783e3aa924a4b8c4c 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 26 371 4.1E-112 T 29-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 CVS42_RS08445 a819432995b12d67d7242116c8687e2d 754 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 752 0.0 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CVS42_RS08445 a819432995b12d67d7242116c8687e2d 754 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 752 36.613 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CVS42_RS08445 a819432995b12d67d7242116c8687e2d 754 SUPERFAMILY SSF51726 390 751 5.76E-118 T 29-03-2018 CVS42_RS08445 a819432995b12d67d7242116c8687e2d 754 SUPERFAMILY SSF51726 4 377 1.57E-107 T 29-03-2018 CVS42_RS08445 a819432995b12d67d7242116c8687e2d 754 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 311 7.2E-120 T 29-03-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CVS42_RS08445 a819432995b12d67d7242116c8687e2d 754 Gene3D G3DSA:3.20.20.210 385 753 9.1E-125 T 29-03-2018 CVS42_RS08445 a819432995b12d67d7242116c8687e2d 754 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 425 747 1.5E-150 T 29-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CVS42_RS08445 a819432995b12d67d7242116c8687e2d 754 Gene3D G3DSA:3.20.20.210 2 384 1.3E-135 T 29-03-2018 CVS42_RS08445 a819432995b12d67d7242116c8687e2d 754 PIRSF PIRSF000382 1 754 0.0 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CVS42_RS03290 d71d8bc338661348396f145876bffcd4 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 30 103 5.9E-26 T 29-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CVS42_RS03290 d71d8bc338661348396f145876bffcd4 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 232 3.4E-7 T 29-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CVS42_RS03290 d71d8bc338661348396f145876bffcd4 265 SUPERFAMILY SSF101386 139 239 6.54E-24 T 29-03-2018 CVS42_RS03290 d71d8bc338661348396f145876bffcd4 265 Gene3D G3DSA:1.10.287.1080 140 265 8.8E-27 T 29-03-2018 CVS42_RS03290 d71d8bc338661348396f145876bffcd4 265 TIGRFAM TIGR00444 mazG: MazG family protein 13 260 5.0E-105 T 29-03-2018 IPR011551 NTP pyrophosphohydrolase MazG CVS42_RS03290 d71d8bc338661348396f145876bffcd4 265 Gene3D G3DSA:1.10.287.1080 6 125 1.3E-38 T 29-03-2018 CVS42_RS03290 d71d8bc338661348396f145876bffcd4 265 SUPERFAMILY SSF101386 5 107 7.52E-26 T 29-03-2018 CVS42_RS05590 d976354cd3995f8aeab8ece2f3e4ffbf 162 SMART SM00260 14 151 6.4E-49 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS05590 d976354cd3995f8aeab8ece2f3e4ffbf 162 Gene3D G3DSA:2.40.50.180 133 160 0.027 T 29-03-2018 CVS42_RS05590 d976354cd3995f8aeab8ece2f3e4ffbf 162 Pfam PF01584 CheW-like domain 18 154 5.2E-40 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS05590 d976354cd3995f8aeab8ece2f3e4ffbf 162 SUPERFAMILY SSF50341 14 157 7.06E-42 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS05590 d976354cd3995f8aeab8ece2f3e4ffbf 162 Gene3D G3DSA:2.40.50.180 35 98 3.2E-22 T 29-03-2018 CVS42_RS05590 d976354cd3995f8aeab8ece2f3e4ffbf 162 Gene3D G3DSA:2.30.30.40 99 132 1.1E-16 T 29-03-2018 CVS42_RS10430 860a47b4d38ae841627567bc7471a2cd 347 Gene3D G3DSA:3.40.50.410 92 321 2.2E-40 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS10430 860a47b4d38ae841627567bc7471a2cd 347 SUPERFAMILY SSF53300 95 293 2.37E-34 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS10430 860a47b4d38ae841627567bc7471a2cd 347 Pfam PF00092 von Willebrand factor type A domain 99 289 9.7E-24 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS10430 860a47b4d38ae841627567bc7471a2cd 347 SMART SM00327 97 286 4.2E-21 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS00945 2d0464b521c146beedcdcb54d26c4f3c 455 SUPERFAMILY SSF56024 253 429 1.13E-20 T 29-03-2018 CVS42_RS00945 2d0464b521c146beedcdcb54d26c4f3c 455 PIRSF PIRSF000850 5 455 4.7E-186 T 29-03-2018 CVS42_RS00945 2d0464b521c146beedcdcb54d26c4f3c 455 Gene3D G3DSA:3.30.870.10 200 430 1.1E-18 T 29-03-2018 CVS42_RS00945 2d0464b521c146beedcdcb54d26c4f3c 455 SUPERFAMILY SSF56024 23 207 4.71E-28 T 29-03-2018 CVS42_RS00945 2d0464b521c146beedcdcb54d26c4f3c 455 Gene3D G3DSA:3.30.870.10 10 199 7.9E-18 T 29-03-2018 CVS42_RS00945 2d0464b521c146beedcdcb54d26c4f3c 455 SMART SM00155 356 383 0.041 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CVS42_RS00945 2d0464b521c146beedcdcb54d26c4f3c 455 SMART SM00155 135 161 0.13 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CVS42_RS00945 2d0464b521c146beedcdcb54d26c4f3c 455 Pfam PF13091 PLD-like domain 263 398 1.5E-19 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CVS42_RS14950 7a72466cfc542e7c53f2ada634c031d0 1250 SUPERFAMILY SSF52540 1145 1231 4.91E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS14950 7a72466cfc542e7c53f2ada634c031d0 1250 SUPERFAMILY SSF52540 30 82 4.91E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS14950 7a72466cfc542e7c53f2ada634c031d0 1250 SUPERFAMILY SSF52540 138 211 4.91E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS14950 7a72466cfc542e7c53f2ada634c031d0 1250 Gene3D G3DSA:1.20.120.330 818 955 0.0033 T 29-03-2018 CVS42_RS14950 7a72466cfc542e7c53f2ada634c031d0 1250 Gene3D G3DSA:1.20.120.330 626 807 6.7E-5 T 29-03-2018 CVS42_RS14950 7a72466cfc542e7c53f2ada634c031d0 1250 Gene3D G3DSA:3.40.50.300 1 248 1.5E-25 T 29-03-2018 CVS42_RS14950 7a72466cfc542e7c53f2ada634c031d0 1250 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1152 1208 3.8E-11 T 29-03-2018 CVS42_RS14950 7a72466cfc542e7c53f2ada634c031d0 1250 Pfam PF13476 AAA domain 5 396 1.8E-20 T 29-03-2018 CVS42_RS14950 7a72466cfc542e7c53f2ada634c031d0 1250 Gene3D G3DSA:3.40.50.300 971 1241 2.2E-11 T 29-03-2018 CVS42_RS17635 7e1591bb210bfe89874a0618e7c52e15 643 Gene3D G3DSA:3.30.70.270 201 369 2.6E-40 T 29-03-2018 CVS42_RS17635 7e1591bb210bfe89874a0618e7c52e15 643 SUPERFAMILY SSF141868 378 626 6.54E-74 T 29-03-2018 IPR001633 EAL domain CVS42_RS17635 7e1591bb210bfe89874a0618e7c52e15 643 Pfam PF00563 EAL domain 382 614 2.0E-63 T 29-03-2018 IPR001633 EAL domain CVS42_RS17635 7e1591bb210bfe89874a0618e7c52e15 643 Pfam PF00990 Diguanylate cyclase, GGDEF domain 206 355 2.0E-28 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS17635 7e1591bb210bfe89874a0618e7c52e15 643 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 205 354 5.9E-23 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS17635 7e1591bb210bfe89874a0618e7c52e15 643 Gene3D G3DSA:3.20.20.450 370 632 4.0E-85 T 29-03-2018 IPR001633 EAL domain CVS42_RS17635 7e1591bb210bfe89874a0618e7c52e15 643 SUPERFAMILY SSF55073 211 357 1.02E-32 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS17635 7e1591bb210bfe89874a0618e7c52e15 643 SMART SM00052 372 619 7.6E-87 T 29-03-2018 IPR001633 EAL domain CVS42_RS17635 7e1591bb210bfe89874a0618e7c52e15 643 SMART SM00267 195 362 3.9E-30 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS10320 c18f07aec9406a8f0fc966247da6843f 316 SUPERFAMILY SSF52540 6 288 2.85E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS10320 c18f07aec9406a8f0fc966247da6843f 316 Gene3D G3DSA:1.10.8.300 197 313 2.9E-28 T 29-03-2018 CVS42_RS10320 c18f07aec9406a8f0fc966247da6843f 316 Gene3D G3DSA:3.40.50.300 17 183 2.8E-25 T 29-03-2018 CVS42_RS10320 c18f07aec9406a8f0fc966247da6843f 316 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 9.3E-61 T 29-03-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 CVS42_RS10320 c18f07aec9406a8f0fc966247da6843f 316 PIRSF PIRSF002849 1 316 2.6E-118 T 29-03-2018 CVS42_RS06560 3a8095d77785b1eabb151820a0bce6e9 668 SMART SM00283 406 667 1.1E-73 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS06560 3a8095d77785b1eabb151820a0bce6e9 668 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 562 2.6E-8 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS06560 3a8095d77785b1eabb151820a0bce6e9 668 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 2.6E-8 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS06560 3a8095d77785b1eabb151820a0bce6e9 668 SUPERFAMILY SSF58104 359 666 3.14E-74 T 29-03-2018 CVS42_RS06560 3a8095d77785b1eabb151820a0bce6e9 668 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 632 1.8E-40 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS06560 3a8095d77785b1eabb151820a0bce6e9 668 Gene3D G3DSA:1.20.120.230 63 365 0.035 T 29-03-2018 CVS42_RS06560 3a8095d77785b1eabb151820a0bce6e9 668 Gene3D G3DSA:1.10.287.950 440 668 2.4E-48 T 29-03-2018 CVS42_RS06560 3a8095d77785b1eabb151820a0bce6e9 668 SMART SM00304 339 391 0.003 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS03220 fefd2eed26e0ad04ebe3f243481e18ac 176 Gene3D G3DSA:3.40.50.2020 2 176 3.4E-41 T 29-03-2018 CVS42_RS03220 fefd2eed26e0ad04ebe3f243481e18ac 176 Pfam PF00156 Phosphoribosyl transferase domain 13 159 4.4E-21 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CVS42_RS03220 fefd2eed26e0ad04ebe3f243481e18ac 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 3.5E-70 T 29-03-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 CVS42_RS03220 fefd2eed26e0ad04ebe3f243481e18ac 176 SUPERFAMILY SSF53271 3 175 1.97E-52 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CVS42_RS02245 176422d6671c494b0a9efeb2543cd89e 274 Gene3D G3DSA:3.40.190.10 71 165 2.2E-9 T 29-03-2018 CVS42_RS02245 176422d6671c494b0a9efeb2543cd89e 274 Gene3D G3DSA:3.40.190.10 166 252 4.7E-16 T 29-03-2018 CVS42_RS02245 176422d6671c494b0a9efeb2543cd89e 274 SUPERFAMILY SSF53850 139 269 5.79E-22 T 29-03-2018 CVS42_RS02245 176422d6671c494b0a9efeb2543cd89e 274 SUPERFAMILY SSF46785 1 85 8.17E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02245 176422d6671c494b0a9efeb2543cd89e 274 Pfam PF03466 LysR substrate binding domain 144 268 1.2E-22 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS02245 176422d6671c494b0a9efeb2543cd89e 274 Gene3D G3DSA:1.10.10.10 1 70 4.6E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02245 176422d6671c494b0a9efeb2543cd89e 274 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 2.5E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS02245 176422d6671c494b0a9efeb2543cd89e 274 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.3E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS02245 176422d6671c494b0a9efeb2543cd89e 274 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.3E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS02245 176422d6671c494b0a9efeb2543cd89e 274 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.3E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS20220 1fbb8cec78b438144930c1bbacd7f32b 1287 Pfam PF13502 AsmA-like C-terminal region 997 1239 2.4E-58 T 29-03-2018 IPR032712 AsmA-like, C-terminal CVS42_RS20220 1fbb8cec78b438144930c1bbacd7f32b 1287 Pfam PF13116 Protein of unknown function 485 764 2.1E-81 T 29-03-2018 IPR025263 Domain of unknown function DUF3971 CVS42_RS20220 1fbb8cec78b438144930c1bbacd7f32b 1287 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 5 1242 7.3E-252 T 29-03-2018 IPR011836 Conserved hypothetical protein CHP02099 CVS42_RS04495 c64f6b1fd8cb38b1cb30d1285285547f 394 Gene3D G3DSA:3.40.50.150 144 387 3.1E-27 T 29-03-2018 CVS42_RS04495 c64f6b1fd8cb38b1cb30d1285285547f 394 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 8.1E-6 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS04495 c64f6b1fd8cb38b1cb30d1285285547f 394 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 8.1E-6 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS04495 c64f6b1fd8cb38b1cb30d1285285547f 394 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 8.1E-6 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS04495 c64f6b1fd8cb38b1cb30d1285285547f 394 SUPERFAMILY SSF53335 138 375 1.52E-26 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS04495 c64f6b1fd8cb38b1cb30d1285285547f 394 SUPERFAMILY SSF46955 1 101 1.06E-21 T 29-03-2018 IPR009061 Putative DNA-binding domain CVS42_RS04495 c64f6b1fd8cb38b1cb30d1285285547f 394 Pfam PF13649 Methyltransferase domain 191 268 1.1E-11 T 29-03-2018 CVS42_RS04495 c64f6b1fd8cb38b1cb30d1285285547f 394 Pfam PF13411 MerR HTH family regulatory protein 1 61 3.4E-14 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS04495 c64f6b1fd8cb38b1cb30d1285285547f 394 Gene3D G3DSA:1.10.1660.10 1 54 4.0E-17 T 29-03-2018 CVS42_RS04495 c64f6b1fd8cb38b1cb30d1285285547f 394 SMART SM00422 1 69 1.2E-16 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS04495 c64f6b1fd8cb38b1cb30d1285285547f 394 Gene3D G3DSA:1.10.1660.10 55 116 2.2E-5 T 29-03-2018 CVS42_RS16850 cc9b835a717ed868ba96298bc291ca62 152 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 108 125 - T 29-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CVS42_RS16850 cc9b835a717ed868ba96298bc291ca62 152 SUPERFAMILY SSF51230 77 152 2.49E-24 T 29-03-2018 IPR011053 Single hybrid motif CVS42_RS16850 cc9b835a717ed868ba96298bc291ca62 152 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 152 1.8E-58 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CVS42_RS16850 cc9b835a717ed868ba96298bc291ca62 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 98 112 7.1E-16 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CVS42_RS16850 cc9b835a717ed868ba96298bc291ca62 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 81 94 7.1E-16 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CVS42_RS16850 cc9b835a717ed868ba96298bc291ca62 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 113 126 7.1E-16 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CVS42_RS16850 cc9b835a717ed868ba96298bc291ca62 152 Gene3D G3DSA:2.40.50.100 4 152 5.3E-21 T 29-03-2018 CVS42_RS16850 cc9b835a717ed868ba96298bc291ca62 152 Pfam PF00364 Biotin-requiring enzyme 79 151 9.7E-25 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CVS42_RS18635 ed2080ad45c8c97edaa5ae0b9ba81c87 186 SUPERFAMILY SSF55811 3 182 3.79E-37 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CVS42_RS18635 ed2080ad45c8c97edaa5ae0b9ba81c87 186 Gene3D G3DSA:3.90.79.10 8 186 1.1E-33 T 29-03-2018 CVS42_RS18635 ed2080ad45c8c97edaa5ae0b9ba81c87 186 Pfam PF00293 NUDIX domain 47 130 3.0E-12 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CVS42_RS05815 948866680b8c4b57740dd3d4bf40c821 121 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 1 121 3.9E-45 T 29-03-2018 IPR012672 Type III secretion system YscX CVS42_RS05815 948866680b8c4b57740dd3d4bf40c821 121 TIGRFAM TIGR02502 type_III_YscX: type III secretion protein, YscX family 1 121 1.3E-48 T 29-03-2018 IPR012672 Type III secretion system YscX CVS42_RS12190 fe8cfb8c4fbb66b4781b6decff76d9df 798 Gene3D G3DSA:2.60.120.640 186 300 6.2E-11 T 29-03-2018 CVS42_RS12190 fe8cfb8c4fbb66b4781b6decff76d9df 798 Gene3D G3DSA:2.60.120.640 671 774 0.48 T 29-03-2018 CVS42_RS12190 fe8cfb8c4fbb66b4781b6decff76d9df 798 Gene3D G3DSA:2.60.40.810 424 670 0.18 T 29-03-2018 CVS42_RS03295 f6992b6b2db77df17eba0316ed1772b7 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 6.0E-62 T 29-03-2018 IPR017926 Glutamine amidotransferase CVS42_RS03295 f6992b6b2db77df17eba0316ed1772b7 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 2.0E-261 T 29-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CVS42_RS03295 f6992b6b2db77df17eba0316ed1772b7 545 Gene3D G3DSA:3.40.50.880 286 543 2.1E-73 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS03295 f6992b6b2db77df17eba0316ed1772b7 545 Gene3D G3DSA:3.40.50.300 1 285 1.8E-129 T 29-03-2018 CVS42_RS03295 f6992b6b2db77df17eba0316ed1772b7 545 SUPERFAMILY SSF52317 289 541 2.82E-88 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS03295 f6992b6b2db77df17eba0316ed1772b7 545 Pfam PF06418 CTP synthase N-terminus 4 266 3.3E-125 T 29-03-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CVS42_RS03295 f6992b6b2db77df17eba0316ed1772b7 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 50.779 T 29-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CVS42_RS03295 f6992b6b2db77df17eba0316ed1772b7 545 SUPERFAMILY SSF52540 3 269 3.32E-121 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS17290 fdc37f0a17d2f22eef430e1caf7b8637 503 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 240 501 22.16 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CVS42_RS17290 fdc37f0a17d2f22eef430e1caf7b8637 503 Gene3D G3DSA:3.40.1190.20 241 499 5.1E-48 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS17290 fdc37f0a17d2f22eef430e1caf7b8637 503 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 243 497 2.0E-63 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CVS42_RS17290 fdc37f0a17d2f22eef430e1caf7b8637 503 SUPERFAMILY SSF53613 238 496 2.12E-71 T 29-03-2018 IPR029056 Ribokinase-like CVS42_RS17290 fdc37f0a17d2f22eef430e1caf7b8637 503 Pfam PF01256 Carbohydrate kinase 263 491 2.9E-56 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CVS42_RS17290 fdc37f0a17d2f22eef430e1caf7b8637 503 Pfam PF03853 YjeF-related protein N-terminus 44 206 2.9E-42 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CVS42_RS17290 fdc37f0a17d2f22eef430e1caf7b8637 503 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 22 227 4.9E-42 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CVS42_RS17290 fdc37f0a17d2f22eef430e1caf7b8637 503 SUPERFAMILY SSF64153 22 261 3.01E-59 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CVS42_RS17290 fdc37f0a17d2f22eef430e1caf7b8637 503 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 23 227 21.78 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CVS42_RS17290 fdc37f0a17d2f22eef430e1caf7b8637 503 PIRSF PIRSF017184 20 502 1.5E-124 T 29-03-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 CVS42_RS17290 fdc37f0a17d2f22eef430e1caf7b8637 503 Gene3D G3DSA:3.40.50.10260 10 240 2.1E-58 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CVS42_RS11775 523e72da111945c9d5902859aa0dc9ec 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 230 1.1E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS11775 523e72da111945c9d5902859aa0dc9ec 236 SMART SM00862 154 230 1.2E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS11775 523e72da111945c9d5902859aa0dc9ec 236 SUPERFAMILY SSF46894 133 231 2.38E-26 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS11775 523e72da111945c9d5902859aa0dc9ec 236 Gene3D G3DSA:3.40.50.2300 1 123 3.9E-27 T 29-03-2018 CVS42_RS11775 523e72da111945c9d5902859aa0dc9ec 236 SMART SM00448 2 112 9.9E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS11775 523e72da111945c9d5902859aa0dc9ec 236 Pfam PF00072 Response regulator receiver domain 4 112 9.0E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS11775 523e72da111945c9d5902859aa0dc9ec 236 Gene3D G3DSA:1.10.10.10 124 236 7.4E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS11775 523e72da111945c9d5902859aa0dc9ec 236 SUPERFAMILY SSF52172 1 126 8.54E-32 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 SMART SM00671 115 149 21.0 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 SMART SM00671 79 114 1.2E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 SMART SM00671 380 415 0.018 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 SMART SM00671 183 218 0.012 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 SMART SM00671 247 282 3.5E-4 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 SMART SM00671 344 379 4.1E-4 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 SMART SM00671 150 182 5.7 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 SMART SM00671 312 343 6.8 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 SMART SM00671 38 69 0.28 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 SUPERFAMILY SSF81901 232 418 3.58E-33 T 29-03-2018 CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 Gene3D G3DSA:2.60.40.1180 169 226 6.5E-12 T 29-03-2018 CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 Gene3D G3DSA:2.60.40.1180 326 455 4.1E-22 T 29-03-2018 CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 Gene3D G3DSA:2.60.40.1180 293 325 0.0063 T 29-03-2018 CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 Gene3D G3DSA:2.60.40.1180 227 291 2.8E-8 T 29-03-2018 CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 Gene3D G3DSA:2.60.40.1180 135 168 0.0012 T 29-03-2018 CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 Gene3D G3DSA:2.60.40.1180 60 134 2.5E-13 T 29-03-2018 CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 Pfam PF08238 Sel1 repeat 167 182 1.2 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 Pfam PF08238 Sel1 repeat 291 310 4.7 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 Pfam PF08238 Sel1 repeat 80 114 7.5E-7 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 Pfam PF08238 Sel1 repeat 184 216 0.012 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 Pfam PF08238 Sel1 repeat 40 67 0.35 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 Pfam PF08238 Sel1 repeat 247 282 2.8E-5 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 Pfam PF08238 Sel1 repeat 346 379 2.1 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 Pfam PF08238 Sel1 repeat 117 149 0.018 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 Pfam PF08238 Sel1 repeat 381 414 2.4E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 SUPERFAMILY SSF81901 79 226 1.05E-25 T 29-03-2018 CVS42_RS15150 026ec5e729163adb78bc0f51aa404c67 455 Gene3D G3DSA:1.25.40.10 3 59 0.096 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS17755 5219bd6a14a764481e2b51ce55519f04 184 Gene3D G3DSA:1.20.950.20 3 182 8.2E-26 T 29-03-2018 CVS42_RS17755 5219bd6a14a764481e2b51ce55519f04 184 Pfam PF01292 Prokaryotic cytochrome b561 10 169 3.7E-22 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CVS42_RS17755 5219bd6a14a764481e2b51ce55519f04 184 SUPERFAMILY SSF81342 6 169 6.04E-25 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CVS42_RS14870 336f2fc6dbf397bf8c29cee3096bc79d 162 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 162 85.823 T 29-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria CVS42_RS14870 336f2fc6dbf397bf8c29cee3096bc79d 162 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 4.5E-33 T 29-03-2018 IPR005134 Uncharacterised protein family UPF0114 CVS42_RS14870 336f2fc6dbf397bf8c29cee3096bc79d 162 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 161 1.8E-69 T 29-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria CVS42_RS15645 4168db194621e916dc9d602ca2f7e348 705 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 704 3.1E-201 T 29-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 CVS42_RS15645 4168db194621e916dc9d602ca2f7e348 705 Pfam PF03477 ATP cone domain 4 89 7.7E-21 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CVS42_RS15645 4168db194621e916dc9d602ca2f7e348 705 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 704 3.0E-180 T 29-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 CVS42_RS15645 4168db194621e916dc9d602ca2f7e348 705 Gene3D G3DSA:3.20.70.20 121 686 3.2E-204 T 29-03-2018 CVS42_RS15645 4168db194621e916dc9d602ca2f7e348 705 SUPERFAMILY SSF51998 121 686 1.65E-195 T 29-03-2018 CVS42_RS15645 4168db194621e916dc9d602ca2f7e348 705 ProSitePatterns PS00850 Glycine radical domain signature. 675 683 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CVS42_RS09485 036fe35e030eb3d57b085ea1db299ca6 305 Pfam PF13737 Transposase DDE domain 19 130 1.1E-38 T 29-03-2018 IPR025668 Transposase DDE domain CVS42_RS07345 8bcc41debf5672293d8bb731f48a20bf 160 SUPERFAMILY SSF52833 27 149 1.25E-26 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS07345 8bcc41debf5672293d8bb731f48a20bf 160 Gene3D G3DSA:3.40.30.10 22 160 4.6E-24 T 29-03-2018 CVS42_RS07345 8bcc41debf5672293d8bb731f48a20bf 160 Pfam PF08534 Redoxin 28 109 2.5E-11 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CVS42_RS07345 8bcc41debf5672293d8bb731f48a20bf 160 ProSitePatterns PS00194 Thioredoxin family active site. 51 69 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CVS42_RS13930 f9505ca3a4bc5331eb6c84d457f1d748 492 Gene3D G3DSA:3.30.1360.60 416 491 5.1E-25 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CVS42_RS13930 f9505ca3a4bc5331eb6c84d457f1d748 492 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 431 448 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CVS42_RS13930 f9505ca3a4bc5331eb6c84d457f1d748 492 Pfam PF02378 Phosphotransferase system, EIIC 12 331 1.5E-78 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CVS42_RS13930 f9505ca3a4bc5331eb6c84d457f1d748 492 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 391 478 6.9E-23 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CVS42_RS13930 f9505ca3a4bc5331eb6c84d457f1d748 492 Pfam PF00367 phosphotransferase system, EIIB 420 453 1.5E-13 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CVS42_RS13930 f9505ca3a4bc5331eb6c84d457f1d748 492 SUPERFAMILY SSF55604 417 490 3.53E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CVS42_RS13930 f9505ca3a4bc5331eb6c84d457f1d748 492 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 489 1.2E-214 T 29-03-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 CVS42_RS08050 abe4bef46b3139405cde29e845483edb 578 SUPERFAMILY SSF52091 462 568 1.86E-14 T 29-03-2018 IPR002645 STAS domain CVS42_RS08050 abe4bef46b3139405cde29e845483edb 578 Pfam PF01740 STAS domain 465 566 4.3E-12 T 29-03-2018 IPR002645 STAS domain CVS42_RS08050 abe4bef46b3139405cde29e845483edb 578 Pfam PF00916 Sulfate permease family 31 417 6.8E-76 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CVS42_RS08050 abe4bef46b3139405cde29e845483edb 578 Gene3D G3DSA:3.30.750.24 452 569 6.0E-17 T 29-03-2018 IPR002645 STAS domain CVS42_RS08050 abe4bef46b3139405cde29e845483edb 578 TIGRFAM TIGR00815 sulP: sulfate permease 23 566 8.1E-121 T 29-03-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 CVS42_RS01545 f7f222973a2d0f9ac24a2ecb9710ebb2 107 Pfam PF10761 Protein of unknown function (DUF2590) 7 105 2.8E-39 T 29-03-2018 IPR019697 Bacteriophage HP1, Orf28 CVS42_RS18060 2336571ecff08cbc4108d72e0f329aaa 200 SUPERFAMILY SSF53955 18 183 2.25E-25 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS18060 2336571ecff08cbc4108d72e0f329aaa 200 Gene3D G3DSA:1.10.530.10 35 195 5.7E-17 T 29-03-2018 CVS42_RS08950 0c2a3dbd7a9d3dd3688224de546706aa 561 SUPERFAMILY SSF116726 294 377 2.22E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS08950 0c2a3dbd7a9d3dd3688224de546706aa 561 Pfam PF06826 Predicted Permease Membrane Region 389 556 4.3E-37 T 29-03-2018 IPR006512 YidE/YbjL duplication CVS42_RS08950 0c2a3dbd7a9d3dd3688224de546706aa 561 Pfam PF06826 Predicted Permease Membrane Region 17 184 2.0E-35 T 29-03-2018 IPR006512 YidE/YbjL duplication CVS42_RS08950 0c2a3dbd7a9d3dd3688224de546706aa 561 SUPERFAMILY SSF116726 230 285 3.01E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS08950 0c2a3dbd7a9d3dd3688224de546706aa 561 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 58.626 T 29-03-2018 IPR023017 Transport protein YbjL, putative CVS42_RS08950 0c2a3dbd7a9d3dd3688224de546706aa 561 Gene3D G3DSA:3.30.70.1450 217 288 1.7E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS08950 0c2a3dbd7a9d3dd3688224de546706aa 561 Gene3D G3DSA:3.30.70.1450 298 378 5.9E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS08950 0c2a3dbd7a9d3dd3688224de546706aa 561 Pfam PF02080 TrkA-C domain 309 375 4.7E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS08950 0c2a3dbd7a9d3dd3688224de546706aa 561 Pfam PF02080 TrkA-C domain 232 281 2.2E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS08950 0c2a3dbd7a9d3dd3688224de546706aa 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 543 1.3E-34 T 29-03-2018 IPR006512 YidE/YbjL duplication CVS42_RS08950 0c2a3dbd7a9d3dd3688224de546706aa 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 22 171 1.3E-27 T 29-03-2018 IPR006512 YidE/YbjL duplication CVS42_RS14420 a068f58e088a8d2dc484c646879301da 203 SUPERFAMILY SSF52540 22 193 1.1E-32 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS14420 a068f58e088a8d2dc484c646879301da 203 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 23 194 35.636 T 29-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CVS42_RS14420 a068f58e088a8d2dc484c646879301da 203 Gene3D G3DSA:3.40.50.300 20 198 5.5E-44 T 29-03-2018 CVS42_RS14420 a068f58e088a8d2dc484c646879301da 203 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 7 189 8.7E-72 T 29-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CVS42_RS14420 a068f58e088a8d2dc484c646879301da 203 Pfam PF01583 Adenylylsulphate kinase 24 175 7.8E-64 T 29-03-2018 CVS42_RS01075 ce77069d62f77534055295372201da5b 210 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 29-03-2018 IPR019926 Ribosomal protein L3, conserved site CVS42_RS01075 ce77069d62f77534055295372201da5b 210 Gene3D G3DSA:4.10.960.10 58 166 7.1E-33 T 29-03-2018 CVS42_RS01075 ce77069d62f77534055295372201da5b 210 SUPERFAMILY SSF50447 1 209 3.27E-82 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CVS42_RS01075 ce77069d62f77534055295372201da5b 210 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 40.974 T 29-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01075 ce77069d62f77534055295372201da5b 210 Pfam PF00297 Ribosomal protein L3 101 183 9.8E-12 T 29-03-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01075 ce77069d62f77534055295372201da5b 210 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 5.7E-93 T 29-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS14515 7357c91a81ae9adc423087f5be7b04ca 136 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS14515 7357c91a81ae9adc423087f5be7b04ca 136 Pfam PF08334 Type II secretion system (T2SS), protein G 31 134 2.6E-35 T 29-03-2018 IPR013545 Type II secretion system protein G CVS42_RS14515 7357c91a81ae9adc423087f5be7b04ca 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 1.8E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS14515 7357c91a81ae9adc423087f5be7b04ca 136 SUPERFAMILY SSF54523 36 134 5.23E-28 T 29-03-2018 CVS42_RS14515 7357c91a81ae9adc423087f5be7b04ca 136 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 7 135 5.7E-44 T 29-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 CVS42_RS14515 7357c91a81ae9adc423087f5be7b04ca 136 Gene3D G3DSA:3.30.700.10 23 136 2.5E-20 T 29-03-2018 CVS42_RS14515 7357c91a81ae9adc423087f5be7b04ca 136 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 6.5E-15 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CVS42_RS14515 7357c91a81ae9adc423087f5be7b04ca 136 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 6.5E-15 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CVS42_RS14515 7357c91a81ae9adc423087f5be7b04ca 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 6.0E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS16260 bd4872be22cebd6e7ee2ae0465a64754 102 PIRSF PIRSF003113 1 97 1.8E-35 T 29-03-2018 IPR002634 BolA protein CVS42_RS16260 bd4872be22cebd6e7ee2ae0465a64754 102 Gene3D G3DSA:3.30.300.90 1 89 1.7E-30 T 29-03-2018 CVS42_RS16260 bd4872be22cebd6e7ee2ae0465a64754 102 SUPERFAMILY SSF82657 2 87 1.15E-30 T 29-03-2018 IPR002634 BolA protein CVS42_RS16260 bd4872be22cebd6e7ee2ae0465a64754 102 Pfam PF01722 BolA-like protein 9 82 4.8E-31 T 29-03-2018 IPR002634 BolA protein CVS42_RS12155 94e9288814e21cccb29927db2031ef6e 487 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 4.0E-129 T 29-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CVS42_RS12155 94e9288814e21cccb29927db2031ef6e 487 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.652 T 29-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CVS42_RS12155 94e9288814e21cccb29927db2031ef6e 487 Pfam PF00361 Proton-conducting membrane transporter 122 420 3.8E-77 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS20545 a9c11d9a800a4eecaa43946412a9280c 206 SUPERFAMILY SSF46689 4 77 2.54E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS20545 a9c11d9a800a4eecaa43946412a9280c 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 58 1.5E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS20545 a9c11d9a800a4eecaa43946412a9280c 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CVS42_RS20545 a9c11d9a800a4eecaa43946412a9280c 206 Gene3D G3DSA:1.10.357.10 2 204 6.4E-28 T 29-03-2018 CVS42_RS15295 6d8eae7d8b5f6bb35d1b1aa26e1fbe43 176 Gene3D G3DSA:3.40.140.10 40 165 4.2E-36 T 29-03-2018 CVS42_RS15295 6d8eae7d8b5f6bb35d1b1aa26e1fbe43 176 Pfam PF04002 RadC-like JAB domain 50 161 7.4E-35 T 29-03-2018 IPR025657 RadC-like JAB domain CVS42_RS17430 36b5f0f202a571abb7ea11c29f013f86 303 Gene3D G3DSA:3.90.550.10 2 303 7.1E-55 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS17430 36b5f0f202a571abb7ea11c29f013f86 303 Pfam PF00483 Nucleotidyl transferase 11 280 2.0E-25 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CVS42_RS17430 36b5f0f202a571abb7ea11c29f013f86 303 SUPERFAMILY SSF53448 8 289 8.56E-61 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS17430 36b5f0f202a571abb7ea11c29f013f86 303 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 277 2.8E-116 T 29-03-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 CVS42_RS13825 5638554726c3b9ba5b28383c2872760a 319 Pfam PF10137 Predicted nucleotide-binding protein containing TIR-like domain 179 296 2.1E-35 T 29-03-2018 IPR019302 Nucleotide-binding protein, predicted, TIR-like domain CVS42_RS13825 5638554726c3b9ba5b28383c2872760a 319 PIRSF PIRSF032620 143 317 4.9E-60 T 29-03-2018 IPR014571 Uncharacterised conserved protein UCP032620 CVS42_RS13825 5638554726c3b9ba5b28383c2872760a 319 PIRSF PIRSF032620 29 135 170.0 T 29-03-2018 IPR014571 Uncharacterised conserved protein UCP032620 CVS42_RS01735 5e5ed1e25bd9411424d59b7f0d1a3a50 636 Pfam PF00672 HAMP domain 306 355 7.9E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS01735 5e5ed1e25bd9411424d59b7f0d1a3a50 636 SUPERFAMILY SSF58104 327 636 3.27E-76 T 29-03-2018 CVS42_RS01735 5e5ed1e25bd9411424d59b7f0d1a3a50 636 Gene3D G3DSA:1.10.287.1060 302 386 0.0079 T 29-03-2018 CVS42_RS01735 5e5ed1e25bd9411424d59b7f0d1a3a50 636 Gene3D G3DSA:1.10.287.950 400 636 1.7E-54 T 29-03-2018 CVS42_RS01735 5e5ed1e25bd9411424d59b7f0d1a3a50 636 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 501 530 2.7E-7 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS01735 5e5ed1e25bd9411424d59b7f0d1a3a50 636 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 388 417 2.7E-7 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS01735 5e5ed1e25bd9411424d59b7f0d1a3a50 636 Pfam PF02743 Cache domain 43 267 4.2E-13 T 29-03-2018 IPR033479 Double Cache domain 1 CVS42_RS01735 5e5ed1e25bd9411424d59b7f0d1a3a50 636 SMART SM00304 305 359 4.8E-12 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS01735 5e5ed1e25bd9411424d59b7f0d1a3a50 636 Gene3D G3DSA:3.30.450.20 157 284 4.9E-14 T 29-03-2018 CVS42_RS01735 5e5ed1e25bd9411424d59b7f0d1a3a50 636 SMART SM00283 374 635 1.6E-86 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS01735 5e5ed1e25bd9411424d59b7f0d1a3a50 636 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 420 603 1.1E-39 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS17535 c2eaff4d960cffce29ee9ae4beb441a1 369 Gene3D G3DSA:3.40.50.2000 1 177 5.2E-12 T 29-03-2018 CVS42_RS17535 c2eaff4d960cffce29ee9ae4beb441a1 369 SUPERFAMILY SSF53756 1 298 6.52E-20 T 29-03-2018 CVS42_RS17535 c2eaff4d960cffce29ee9ae4beb441a1 369 Gene3D G3DSA:3.40.50.2000 178 319 2.9E-10 T 29-03-2018 CVS42_RS17535 c2eaff4d960cffce29ee9ae4beb441a1 369 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 301 5.7E-67 T 29-03-2018 IPR005262 Conserved hypothetical protein CHP00661 CVS42_RS17535 c2eaff4d960cffce29ee9ae4beb441a1 369 Pfam PF13528 Glycosyl transferase family 1 1 299 6.4E-44 T 29-03-2018 CVS42_RS22100 4eb2709788d743947e6d86b220295ff6 458 Pfam PF06123 Inner membrane protein CreD 7 432 2.5E-148 T 29-03-2018 IPR010364 Uncharacterised protein family, inner membrane CreD CVS42_RS22100 4eb2709788d743947e6d86b220295ff6 458 PIRSF PIRSF004548 1 450 2.0E-168 T 29-03-2018 IPR010364 Uncharacterised protein family, inner membrane CreD CVS42_RS10830 8e55d13ccc65236edc5a806947b2c443 607 Gene3D G3DSA:1.10.287.130 218 289 2.8E-20 T 29-03-2018 CVS42_RS10830 8e55d13ccc65236edc5a806947b2c443 607 Gene3D G3DSA:3.30.565.10 297 460 1.1E-48 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS10830 8e55d13ccc65236edc5a806947b2c443 607 SMART SM00448 474 588 4.5E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS10830 8e55d13ccc65236edc5a806947b2c443 607 SMART SM00387 340 456 1.2E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS10830 8e55d13ccc65236edc5a806947b2c443 607 Pfam PF00072 Response regulator receiver domain 476 588 1.4E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS10830 8e55d13ccc65236edc5a806947b2c443 607 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 1.5E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS10830 8e55d13ccc65236edc5a806947b2c443 607 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 1.5E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS10830 8e55d13ccc65236edc5a806947b2c443 607 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 1.5E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS10830 8e55d13ccc65236edc5a806947b2c443 607 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 1.5E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS10830 8e55d13ccc65236edc5a806947b2c443 607 Gene3D G3DSA:3.40.50.2300 468 604 1.3E-40 T 29-03-2018 CVS42_RS10830 8e55d13ccc65236edc5a806947b2c443 607 SMART SM00388 228 293 2.2E-24 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS10830 8e55d13ccc65236edc5a806947b2c443 607 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 453 2.2E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS10830 8e55d13ccc65236edc5a806947b2c443 607 SUPERFAMILY SSF47384 212 294 6.47E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS10830 8e55d13ccc65236edc5a806947b2c443 607 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 293 6.7E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS10830 8e55d13ccc65236edc5a806947b2c443 607 SUPERFAMILY SSF55874 282 454 2.88E-44 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS10830 8e55d13ccc65236edc5a806947b2c443 607 SUPERFAMILY SSF52172 473 599 1.57E-39 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS14460 b3f8f2ccf40935adb73b6c1f75fc7465 246 Gene3D G3DSA:3.40.50.300 3 246 1.2E-37 T 29-03-2018 CVS42_RS14460 b3f8f2ccf40935adb73b6c1f75fc7465 246 SUPERFAMILY SSF52540 5 244 5.51E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS14460 b3f8f2ccf40935adb73b6c1f75fc7465 246 Pfam PF00685 Sulfotransferase domain 5 204 1.5E-12 T 29-03-2018 IPR000863 Sulfotransferase domain GO:0008146 CVS42_RS18120 c3ebdbd62db604aad8a06249c912d884 137 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 5 73 3.0E-19 T 29-03-2018 IPR013362 Pilus modification type IV, PilV CVS42_RS18120 c3ebdbd62db604aad8a06249c912d884 137 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 7.4E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS01855 46b9e852a8977fe608e38da1ae39e9c3 335 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 147 1.2E-26 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CVS42_RS01855 46b9e852a8977fe608e38da1ae39e9c3 335 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 165 312 1.1E-12 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CVS42_RS01855 46b9e852a8977fe608e38da1ae39e9c3 335 SMART SM00859 3 148 2.4E-46 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CVS42_RS01855 46b9e852a8977fe608e38da1ae39e9c3 335 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 151 167 - T 29-03-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CVS42_RS01855 46b9e852a8977fe608e38da1ae39e9c3 335 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 334 1.2E-111 T 29-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CVS42_RS01855 46b9e852a8977fe608e38da1ae39e9c3 335 SUPERFAMILY SSF51735 3 178 8.07E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS01855 46b9e852a8977fe608e38da1ae39e9c3 335 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 335 36.962 T 29-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CVS42_RS01855 46b9e852a8977fe608e38da1ae39e9c3 335 Gene3D G3DSA:3.30.360.10 165 309 2.4E-48 T 29-03-2018 CVS42_RS01855 46b9e852a8977fe608e38da1ae39e9c3 335 Gene3D G3DSA:3.40.50.720 1 164 9.2E-35 T 29-03-2018 CVS42_RS01855 46b9e852a8977fe608e38da1ae39e9c3 335 SUPERFAMILY SSF55347 156 309 6.64E-48 T 29-03-2018 CVS42_RS14410 74950118d3e45faa5e31d1fce56a675a 318 Gene3D G3DSA:3.40.50.720 4 314 3.6E-53 T 29-03-2018 CVS42_RS14410 74950118d3e45faa5e31d1fce56a675a 318 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 175 0.0069 T 29-03-2018 CVS42_RS14410 74950118d3e45faa5e31d1fce56a675a 318 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 225 8.6E-31 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CVS42_RS14410 74950118d3e45faa5e31d1fce56a675a 318 SUPERFAMILY SSF51735 6 312 1.28E-63 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS07405 8d24f961a3b05f58b3bac5c890998032 219 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 214 4.0E-75 T 29-03-2018 IPR006508 Pseudouridine synthase, RluA-like CVS42_RS07405 8d24f961a3b05f58b3bac5c890998032 219 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 51 65 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS07405 8d24f961a3b05f58b3bac5c890998032 219 Gene3D G3DSA:3.30.2350.10 1 211 4.7E-50 T 29-03-2018 CVS42_RS07405 8d24f961a3b05f58b3bac5c890998032 219 Pfam PF00849 RNA pseudouridylate synthase 11 157 3.2E-24 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS07405 8d24f961a3b05f58b3bac5c890998032 219 SUPERFAMILY SSF55120 3 200 6.88E-47 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS06800 6de94b8fe4ce1a1722d6f7408c4d6d2b 305 Gene3D G3DSA:3.40.50.1980 24 139 5.3E-23 T 29-03-2018 CVS42_RS06800 6de94b8fe4ce1a1722d6f7408c4d6d2b 305 SUPERFAMILY SSF53807 25 297 9.03E-49 T 29-03-2018 CVS42_RS06800 6de94b8fe4ce1a1722d6f7408c4d6d2b 305 Gene3D G3DSA:3.40.50.1980 140 305 9.1E-31 T 29-03-2018 CVS42_RS06800 6de94b8fe4ce1a1722d6f7408c4d6d2b 305 Pfam PF01497 Periplasmic binding protein 78 273 7.1E-19 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CVS42_RS04655 3cb1c57bf11d9cb90487dbe0ebf35f38 374 Pfam PF07687 Peptidase dimerisation domain 175 272 5.3E-22 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CVS42_RS04655 3cb1c57bf11d9cb90487dbe0ebf35f38 374 Gene3D G3DSA:3.40.630.10 6 180 1.4E-16 T 29-03-2018 CVS42_RS04655 3cb1c57bf11d9cb90487dbe0ebf35f38 374 Pfam PF01546 Peptidase family M20/M25/M40 73 370 1.7E-23 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CVS42_RS04655 3cb1c57bf11d9cb90487dbe0ebf35f38 374 PIRSF PIRSF037238 1 373 2.9E-145 T 29-03-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase CVS42_RS04655 3cb1c57bf11d9cb90487dbe0ebf35f38 374 SUPERFAMILY SSF53187 3 186 3.83E-42 T 29-03-2018 CVS42_RS04655 3cb1c57bf11d9cb90487dbe0ebf35f38 374 SUPERFAMILY SSF53187 298 373 3.83E-42 T 29-03-2018 CVS42_RS04655 3cb1c57bf11d9cb90487dbe0ebf35f38 374 SUPERFAMILY SSF55031 177 283 2.99E-24 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CVS42_RS04655 3cb1c57bf11d9cb90487dbe0ebf35f38 374 Gene3D G3DSA:3.40.630.10 282 374 1.4E-9 T 29-03-2018 CVS42_RS04655 3cb1c57bf11d9cb90487dbe0ebf35f38 374 Gene3D G3DSA:3.30.70.360 181 281 9.7E-23 T 29-03-2018 CVS42_RS16770 25a49e87f49b3748dd498575bf61f43f 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.4E-74 T 29-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CVS42_RS16770 25a49e87f49b3748dd498575bf61f43f 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.746 T 29-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CVS42_RS16770 25a49e87f49b3748dd498575bf61f43f 149 Pfam PF03477 ATP cone domain 50 136 1.9E-17 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CVS42_RS04235 beaeb0ec1ad854b5e178cca2f2dac220 203 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 26 185 9.8E-25 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain CVS42_RS04235 beaeb0ec1ad854b5e178cca2f2dac220 203 SUPERFAMILY SSF52266 23 201 2.44E-48 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain CVS42_RS04235 beaeb0ec1ad854b5e178cca2f2dac220 203 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 24 34 - T 29-03-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 CVS42_RS04235 beaeb0ec1ad854b5e178cca2f2dac220 203 Gene3D G3DSA:3.40.50.1110 20 203 2.8E-36 T 29-03-2018 CVS42_RS06210 47cea9085b8f9f0d0c1bd4995c3549e2 821 Pfam PF13954 PapC N-terminal domain 37 178 1.7E-36 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CVS42_RS06210 47cea9085b8f9f0d0c1bd4995c3549e2 821 SUPERFAMILY SSF141729 36 152 1.57E-24 T 29-03-2018 CVS42_RS06210 47cea9085b8f9f0d0c1bd4995c3549e2 821 Pfam PF13953 PapC C-terminal domain 746 806 3.4E-7 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CVS42_RS06210 47cea9085b8f9f0d0c1bd4995c3549e2 821 Pfam PF00577 Outer membrane usher protein 195 735 6.5E-135 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS10565 7086aad663477a02780a0dc5d9e5ae56 622 TIGRFAM TIGR00794 kup: potassium uptake protein 101 549 3.3E-177 T 29-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CVS42_RS10565 7086aad663477a02780a0dc5d9e5ae56 622 Pfam PF02705 K+ potassium transporter 14 544 4.0E-204 T 29-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CVS42_RS10565 7086aad663477a02780a0dc5d9e5ae56 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.218 T 29-03-2018 IPR023051 Potassium uptake protein, low affinity, Kup CVS42_RS01890 462fe3a210b020702a64443a606b6a3b 1027 Pfam PF00912 Transglycosylase 155 352 1.2E-24 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CVS42_RS01890 462fe3a210b020702a64443a606b6a3b 1027 Gene3D G3DSA:1.10.3810.10 146 386 1.4E-30 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CVS42_RS01890 462fe3a210b020702a64443a606b6a3b 1027 SUPERFAMILY SSF53955 164 384 4.5E-10 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS01890 462fe3a210b020702a64443a606b6a3b 1027 SUPERFAMILY SSF56601 573 674 6.69E-31 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CVS42_RS01890 462fe3a210b020702a64443a606b6a3b 1027 SUPERFAMILY SSF56601 839 1017 6.69E-31 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CVS42_RS01890 462fe3a210b020702a64443a606b6a3b 1027 Gene3D G3DSA:3.40.710.10 403 1019 3.6E-63 T 29-03-2018 CVS42_RS08460 11892a87f903342a15c4a5bd76494a0b 477 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 29-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CVS42_RS08460 11892a87f903342a15c4a5bd76494a0b 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 395 406 1.6E-17 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CVS42_RS08460 11892a87f903342a15c4a5bd76494a0b 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 1.6E-17 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CVS42_RS08460 11892a87f903342a15c4a5bd76494a0b 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 1.6E-17 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CVS42_RS08460 11892a87f903342a15c4a5bd76494a0b 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 374 382 1.6E-17 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CVS42_RS08460 11892a87f903342a15c4a5bd76494a0b 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 433 1.6E-17 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CVS42_RS08460 11892a87f903342a15c4a5bd76494a0b 477 SUPERFAMILY SSF51445 8 475 9.81E-170 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS08460 11892a87f903342a15c4a5bd76494a0b 477 Gene3D G3DSA:3.20.20.80 1 477 5.6E-171 T 29-03-2018 CVS42_RS08460 11892a87f903342a15c4a5bd76494a0b 477 Pfam PF00232 Glycosyl hydrolase family 1 7 474 1.2E-172 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CVS42_RS12850 15abd930bd135f7e843c8902c82165a0 888 Gene3D G3DSA:3.40.50.1970 430 641 7.3E-48 T 29-03-2018 CVS42_RS12850 15abd930bd135f7e843c8902c82165a0 888 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 718 738 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CVS42_RS12850 15abd930bd135f7e843c8902c82165a0 888 Gene3D G3DSA:3.40.605.10 1 229 2.4E-33 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS12850 15abd930bd135f7e843c8902c82165a0 888 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 848 2.8E-112 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CVS42_RS12850 15abd930bd135f7e843c8902c82165a0 888 PIRSF PIRSF000111 1 864 0.0 T 29-03-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 CVS42_RS12850 15abd930bd135f7e843c8902c82165a0 888 Gene3D G3DSA:1.20.1090.10 642 866 9.3E-60 T 29-03-2018 CVS42_RS12850 15abd930bd135f7e843c8902c82165a0 888 Gene3D G3DSA:3.40.309.10 230 403 6.0E-24 T 29-03-2018 CVS42_RS12850 15abd930bd135f7e843c8902c82165a0 888 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 630 658 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CVS42_RS12850 15abd930bd135f7e843c8902c82165a0 888 SUPERFAMILY SSF56796 451 862 6.41E-114 T 29-03-2018 CVS42_RS12850 15abd930bd135f7e843c8902c82165a0 888 SUPERFAMILY SSF53720 6 453 9.95E-85 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CVS42_RS12850 15abd930bd135f7e843c8902c82165a0 888 Pfam PF00171 Aldehyde dehydrogenase family 6 401 4.1E-29 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS02800 251d91a74178cdca57c0d0c637fac9ae 204 Gene3D G3DSA:2.40.50.140 1 55 1.3E-24 T 29-03-2018 CVS42_RS02800 251d91a74178cdca57c0d0c637fac9ae 204 Gene3D G3DSA:1.10.150.280 56 81 0.1 T 29-03-2018 CVS42_RS02800 251d91a74178cdca57c0d0c637fac9ae 204 SUPERFAMILY SSF47781 66 137 1.56E-20 T 29-03-2018 IPR010994 RuvA domain 2-like CVS42_RS02800 251d91a74178cdca57c0d0c637fac9ae 204 Gene3D G3DSA:1.10.8.10 159 203 4.0E-15 T 29-03-2018 CVS42_RS02800 251d91a74178cdca57c0d0c637fac9ae 204 Gene3D G3DSA:1.10.150.20 82 142 2.9E-14 T 29-03-2018 CVS42_RS02800 251d91a74178cdca57c0d0c637fac9ae 204 SMART SM00278 73 92 1.3 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CVS42_RS02800 251d91a74178cdca57c0d0c637fac9ae 204 SMART SM00278 108 127 0.051 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CVS42_RS02800 251d91a74178cdca57c0d0c637fac9ae 204 SUPERFAMILY SSF50249 2 63 2.46E-18 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS02800 251d91a74178cdca57c0d0c637fac9ae 204 SUPERFAMILY SSF46929 159 203 1.57E-11 T 29-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CVS42_RS02800 251d91a74178cdca57c0d0c637fac9ae 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 5.0E-66 T 29-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CVS42_RS02800 251d91a74178cdca57c0d0c637fac9ae 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 2.2E-14 T 29-03-2018 CVS42_RS02800 251d91a74178cdca57c0d0c637fac9ae 204 Pfam PF01330 RuvA N terminal domain 2 62 6.2E-21 T 29-03-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CVS42_RS02800 251d91a74178cdca57c0d0c637fac9ae 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 30.97 T 29-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CVS42_RS02800 251d91a74178cdca57c0d0c637fac9ae 204 Pfam PF07499 RuvA, C-terminal domain 159 203 4.6E-16 T 29-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CVS42_RS05020 2a0d09499a380cda2485fb3f57498dbb 126 ProSitePatterns PS00850 Glycine radical domain signature. 96 104 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CVS42_RS05020 2a0d09499a380cda2485fb3f57498dbb 126 SUPERFAMILY SSF51998 66 125 1.97E-22 T 29-03-2018 CVS42_RS05020 2a0d09499a380cda2485fb3f57498dbb 126 PIRSF PIRSF000378 2 126 1.1E-51 T 29-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CVS42_RS05020 2a0d09499a380cda2485fb3f57498dbb 126 Gene3D G3DSA:3.20.70.20 9 126 3.7E-28 T 29-03-2018 CVS42_RS05020 2a0d09499a380cda2485fb3f57498dbb 126 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 126 8.6E-69 T 29-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CVS42_RS05020 2a0d09499a380cda2485fb3f57498dbb 126 Pfam PF01228 Glycine radical 10 107 8.0E-23 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CVS42_RS19095 1fea00146309b50701dbd80ed10a4cf6 244 Gene3D G3DSA:1.10.760.10 24 209 1.6E-59 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS19095 1fea00146309b50701dbd80ed10a4cf6 244 Gene3D G3DSA:1.20.5.100 212 244 7.0E-14 T 29-03-2018 CVS42_RS19095 1fea00146309b50701dbd80ed10a4cf6 244 SUPERFAMILY SSF46626 16 208 5.82E-52 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS19095 1fea00146309b50701dbd80ed10a4cf6 244 PRINTS PR00603 Cytochrome C1 signature 209 224 8.9E-6 T 29-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CVS42_RS19095 1fea00146309b50701dbd80ed10a4cf6 244 PRINTS PR00603 Cytochrome C1 signature 190 209 8.9E-6 T 29-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CVS42_RS19095 1fea00146309b50701dbd80ed10a4cf6 244 PRINTS PR00603 Cytochrome C1 signature 42 61 8.9E-6 T 29-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CVS42_RS19095 1fea00146309b50701dbd80ed10a4cf6 244 Pfam PF02167 Cytochrome C1 family 33 76 4.0E-5 T 29-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CVS42_RS19095 1fea00146309b50701dbd80ed10a4cf6 244 Pfam PF02167 Cytochrome C1 family 84 243 2.7E-13 T 29-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CVS42_RS04875 ca45ed3fa22a30aa71daa74536d645fe 922 SUPERFAMILY SSF46565 1 48 3.4E-5 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS04875 ca45ed3fa22a30aa71daa74536d645fe 922 Gene3D G3DSA:1.10.287.110 1 152 1.5E-6 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS17860 cf3c25ba32b5c7675746114a655d13b7 537 Pfam PF07728 AAA domain (dynein-related subfamily) 50 180 2.5E-21 T 29-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CVS42_RS17860 cf3c25ba32b5c7675746114a655d13b7 537 Gene3D G3DSA:3.40.50.300 14 214 1.3E-15 T 29-03-2018 CVS42_RS17860 cf3c25ba32b5c7675746114a655d13b7 537 Gene3D G3DSA:1.10.8.300 215 292 8.1E-7 T 29-03-2018 CVS42_RS17860 cf3c25ba32b5c7675746114a655d13b7 537 SUPERFAMILY SSF52540 22 295 4.1E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS17860 cf3c25ba32b5c7675746114a655d13b7 537 Pfam PF12592 Protein of unknown function (DUF3763) 475 522 7.5E-13 T 29-03-2018 IPR022547 ATPase, RavA, C-terminal GO:0016820 CVS42_RS17860 cf3c25ba32b5c7675746114a655d13b7 537 SMART SM00382 47 190 1.1E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS06795 9b83a9d813a8ec34701654373ecc8ca8 267 SUPERFAMILY SSF52540 3 228 4.7E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS06795 9b83a9d813a8ec34701654373ecc8ca8 267 Gene3D G3DSA:3.40.50.300 1 240 3.0E-63 T 29-03-2018 CVS42_RS06795 9b83a9d813a8ec34701654373ecc8ca8 267 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS06795 9b83a9d813a8ec34701654373ecc8ca8 267 SMART SM00382 27 214 1.7E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS06795 9b83a9d813a8ec34701654373ecc8ca8 267 Pfam PF00005 ABC transporter 18 167 1.6E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS12240 00ae54a6e807b13fe7d0583ae44c2bc4 192 Gene3D G3DSA:3.40.50.150 16 178 1.4E-30 T 29-03-2018 CVS42_RS12240 00ae54a6e807b13fe7d0583ae44c2bc4 192 Pfam PF01596 O-methyltransferase 11 158 2.1E-22 T 29-03-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 CVS42_RS12240 00ae54a6e807b13fe7d0583ae44c2bc4 192 SUPERFAMILY SSF53335 19 191 4.29E-35 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS09345 3b42cc58fe9f1c785918aab0bcff65b4 292 Gene3D G3DSA:3.30.43.10 4 56 5.3E-14 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CVS42_RS09345 3b42cc58fe9f1c785918aab0bcff65b4 292 SMART SM01092 181 283 8.0E-27 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CVS42_RS09345 3b42cc58fe9f1c785918aab0bcff65b4 292 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 182 280 1.1E-24 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CVS42_RS09345 3b42cc58fe9f1c785918aab0bcff65b4 292 Gene3D G3DSA:3.30.465.10 57 173 1.9E-31 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CVS42_RS09345 3b42cc58fe9f1c785918aab0bcff65b4 292 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 6 170 1.6E-50 T 29-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CVS42_RS09345 3b42cc58fe9f1c785918aab0bcff65b4 292 Gene3D G3DSA:3.30.390.50 177 292 8.3E-27 T 29-03-2018 CVS42_RS09345 3b42cc58fe9f1c785918aab0bcff65b4 292 SUPERFAMILY SSF56176 6 171 7.36E-50 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CVS42_RS09345 3b42cc58fe9f1c785918aab0bcff65b4 292 SUPERFAMILY SSF55447 181 286 2.62E-26 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CVS42_RS01840 d973a94e5ca685b28500bbe3135d7a2d 411 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 29-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS01840 d973a94e5ca685b28500bbe3135d7a2d 411 SUPERFAMILY SSF52402 5 168 6.52E-44 T 29-03-2018 CVS42_RS01840 d973a94e5ca685b28500bbe3135d7a2d 411 Pfam PF00764 Arginosuccinate synthase 8 394 7.7E-143 T 29-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS01840 d973a94e5ca685b28500bbe3135d7a2d 411 Gene3D G3DSA:1.20.5.470 366 399 2.0E-13 T 29-03-2018 CVS42_RS01840 d973a94e5ca685b28500bbe3135d7a2d 411 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 400 50.358 T 29-03-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS01840 d973a94e5ca685b28500bbe3135d7a2d 411 Gene3D G3DSA:3.90.1260.10 165 356 2.1E-79 T 29-03-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS01840 d973a94e5ca685b28500bbe3135d7a2d 411 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 397 1.4E-132 T 29-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS01840 d973a94e5ca685b28500bbe3135d7a2d 411 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 119 130 - T 29-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS01840 d973a94e5ca685b28500bbe3135d7a2d 411 SUPERFAMILY SSF69864 174 400 9.81E-84 T 29-03-2018 CVS42_RS01840 d973a94e5ca685b28500bbe3135d7a2d 411 Gene3D G3DSA:3.40.50.620 1 164 3.1E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS02275 43e976ea2e0880d3ce786a55dc5b3c80 220 Pfam PF04012 PspA/IM30 family 2 218 5.0E-36 T 29-03-2018 IPR007157 PspA/IM30 CVS42_RS02275 43e976ea2e0880d3ce786a55dc5b3c80 220 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 217 9.7E-83 T 29-03-2018 IPR014319 Phage shock protein, PspA CVS42_RS22065 34a19fd8f83c2c5e586030005c1ec026 258 Pfam PF03472 Autoinducer binding domain 19 165 1.6E-31 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CVS42_RS22065 34a19fd8f83c2c5e586030005c1ec026 258 SUPERFAMILY SSF46894 167 243 5.44E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS22065 34a19fd8f83c2c5e586030005c1ec026 258 SUPERFAMILY SSF75516 5 171 4.97E-38 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CVS42_RS22065 34a19fd8f83c2c5e586030005c1ec026 258 Pfam PF00196 Bacterial regulatory proteins, luxR family 183 235 5.9E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS22065 34a19fd8f83c2c5e586030005c1ec026 258 Gene3D G3DSA:1.10.10.10 167 246 1.6E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS22065 34a19fd8f83c2c5e586030005c1ec026 258 SMART SM00421 180 237 2.3E-21 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS22065 34a19fd8f83c2c5e586030005c1ec026 258 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 197 1.1E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS22065 34a19fd8f83c2c5e586030005c1ec026 258 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 213 225 1.1E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS22065 34a19fd8f83c2c5e586030005c1ec026 258 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 197 213 1.1E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CVS42_RS22065 34a19fd8f83c2c5e586030005c1ec026 258 Gene3D G3DSA:3.30.450.80 1 166 7.6E-39 T 29-03-2018 CVS42_RS05300 de29990329d655671babbf3267fde6d6 451 Gene3D G3DSA:1.10.10.60 407 451 2.7E-11 T 29-03-2018 CVS42_RS05300 de29990329d655671babbf3267fde6d6 451 Gene3D G3DSA:3.40.50.300 146 321 1.7E-28 T 29-03-2018 CVS42_RS05300 de29990329d655671babbf3267fde6d6 451 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 362 371 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CVS42_RS05300 de29990329d655671babbf3267fde6d6 451 Gene3D G3DSA:3.40.50.2300 8 140 2.4E-30 T 29-03-2018 CVS42_RS05300 de29990329d655671babbf3267fde6d6 451 SMART SM00382 170 312 2.5E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS05300 de29990329d655671babbf3267fde6d6 451 Pfam PF00072 Response regulator receiver domain 14 122 1.6E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS05300 de29990329d655671babbf3267fde6d6 451 SUPERFAMILY SSF46689 398 450 6.81E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS05300 de29990329d655671babbf3267fde6d6 451 Pfam PF00158 Sigma-54 interaction domain 150 315 1.9E-65 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CVS42_RS05300 de29990329d655671babbf3267fde6d6 451 Pfam PF02954 Bacterial regulatory protein, Fis family 408 448 1.0E-10 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS05300 de29990329d655671babbf3267fde6d6 451 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 174 187 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CVS42_RS05300 de29990329d655671babbf3267fde6d6 451 SMART SM00448 11 122 2.6E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS05300 de29990329d655671babbf3267fde6d6 451 SUPERFAMILY SSF52172 11 195 1.71E-40 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS05300 de29990329d655671babbf3267fde6d6 451 Gene3D G3DSA:1.10.8.60 322 406 2.8E-19 T 29-03-2018 CVS42_RS05300 de29990329d655671babbf3267fde6d6 451 SUPERFAMILY SSF52540 150 379 8.91E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS02495 563370aa4dbc3511be25dd44fc9de39f 1165 Pfam PF06761 Intracellular multiplication and human macrophage-killing 506 819 1.9E-74 T 29-03-2018 IPR009612 ImcF-related CVS42_RS02495 563370aa4dbc3511be25dd44fc9de39f 1165 Gene3D G3DSA:3.40.50.300 130 429 1.4E-5 T 29-03-2018 CVS42_RS02495 563370aa4dbc3511be25dd44fc9de39f 1165 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 24 1162 0.0 T 29-03-2018 IPR017731 Type VI secretion system, IcmF CVS42_RS02495 563370aa4dbc3511be25dd44fc9de39f 1165 Pfam PF06744 Type VI secretion protein IcmF C-terminal 918 1113 4.8E-55 T 29-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal CVS42_RS02495 563370aa4dbc3511be25dd44fc9de39f 1165 SUPERFAMILY SSF52540 100 300 1.21E-5 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS02495 563370aa4dbc3511be25dd44fc9de39f 1165 Pfam PF14331 ImcF-related N-terminal domain 201 454 3.2E-73 T 29-03-2018 IPR025743 ImcF-related, N-terminal domain CVS42_RS08960 7bb0ec721fc1ec86acee3a999623e31c 670 Pfam PF12344 Ultra-violet resistance protein B 552 593 2.1E-19 T 29-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain CVS42_RS08960 7bb0ec721fc1ec86acee3a999623e31c 670 SMART SM00487 9 426 4.2E-26 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS08960 7bb0ec721fc1ec86acee3a999623e31c 670 Pfam PF04851 Type III restriction enzyme, res subunit 13 138 6.7E-9 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CVS42_RS08960 7bb0ec721fc1ec86acee3a999623e31c 670 SMART SM00490 460 546 1.3E-19 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS08960 7bb0ec721fc1ec86acee3a999623e31c 670 SUPERFAMILY SSF52540 3 415 2.33E-139 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS08960 7bb0ec721fc1ec86acee3a999623e31c 670 Gene3D G3DSA:3.40.50.300 415 589 2.1E-30 T 29-03-2018 CVS42_RS08960 7bb0ec721fc1ec86acee3a999623e31c 670 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 664 0.0 T 29-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CVS42_RS08960 7bb0ec721fc1ec86acee3a999623e31c 670 Pfam PF02151 UvrB/uvrC motif 632 665 6.3E-9 T 29-03-2018 IPR001943 UVR domain GO:0005515 CVS42_RS08960 7bb0ec721fc1ec86acee3a999623e31c 670 Pfam PF00271 Helicase conserved C-terminal domain 435 544 4.8E-18 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS08960 7bb0ec721fc1ec86acee3a999623e31c 670 SUPERFAMILY SSF52540 36 80 2.9E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS08960 7bb0ec721fc1ec86acee3a999623e31c 670 SUPERFAMILY SSF52540 470 592 2.9E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS08960 7bb0ec721fc1ec86acee3a999623e31c 670 Gene3D G3DSA:3.40.50.300 10 413 6.9E-34 T 29-03-2018 CVS42_RS08960 7bb0ec721fc1ec86acee3a999623e31c 670 SUPERFAMILY SSF46600 621 666 7.98E-12 T 29-03-2018 IPR001943 UVR domain GO:0005515 CVS42_RS08960 7bb0ec721fc1ec86acee3a999623e31c 670 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 666 43.609 T 29-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CVS42_RS08960 7bb0ec721fc1ec86acee3a999623e31c 670 Gene3D G3DSA:4.10.860.10 610 670 2.9E-15 T 29-03-2018 IPR001943 UVR domain GO:0005515 CVS42_RS03440 f6c0c5b3342d0c2150cdc2035a441584 230 Gene3D G3DSA:3.90.550.10 3 230 8.9E-52 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS03440 f6c0c5b3342d0c2150cdc2035a441584 230 SUPERFAMILY SSF53448 11 227 1.38E-63 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS03440 f6c0c5b3342d0c2150cdc2035a441584 230 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 9 226 44.485 T 29-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CVS42_RS03440 f6c0c5b3342d0c2150cdc2035a441584 230 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 225 1.6E-73 T 29-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CVS42_RS03440 f6c0c5b3342d0c2150cdc2035a441584 230 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 103 110 - T 29-03-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CVS42_RS03440 f6c0c5b3342d0c2150cdc2035a441584 230 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 227 2.2E-75 T 29-03-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CVS42_RS10030 7504dce27d3ba29f2bd61adfd883c084 295 Gene3D G3DSA:3.20.20.60 6 295 4.0E-88 T 29-03-2018 CVS42_RS10030 7504dce27d3ba29f2bd61adfd883c084 295 SUPERFAMILY SSF51621 10 291 1.53E-97 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CVS42_RS10030 7504dce27d3ba29f2bd61adfd883c084 295 Pfam PF13714 Phosphoenolpyruvate phosphomutase 14 255 6.2E-49 T 29-03-2018 CVS42_RS10030 7504dce27d3ba29f2bd61adfd883c084 295 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 6 293 48.861 T 29-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 CVS42_RS10030 7504dce27d3ba29f2bd61adfd883c084 295 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 9 292 1.4E-126 T 29-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 CVS42_RS10030 7504dce27d3ba29f2bd61adfd883c084 295 ProSitePatterns PS00161 Isocitrate lyase signature. 122 127 - T 29-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 CVS42_RS12625 31c5d44ae55b4929ed39f8114c9d1a98 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.6E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS12625 31c5d44ae55b4929ed39f8114c9d1a98 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.6E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS12625 31c5d44ae55b4929ed39f8114c9d1a98 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.6E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS12625 31c5d44ae55b4929ed39f8114c9d1a98 280 Pfam PF03466 LysR substrate binding domain 89 275 9.0E-30 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS12625 31c5d44ae55b4929ed39f8114c9d1a98 280 Gene3D G3DSA:1.10.10.10 1 76 1.6E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS12625 31c5d44ae55b4929ed39f8114c9d1a98 280 SUPERFAMILY SSF46785 2 107 2.81E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS12625 31c5d44ae55b4929ed39f8114c9d1a98 280 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.6E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS12625 31c5d44ae55b4929ed39f8114c9d1a98 280 Gene3D G3DSA:3.40.190.10 171 252 2.8E-14 T 29-03-2018 CVS42_RS12625 31c5d44ae55b4929ed39f8114c9d1a98 280 Gene3D G3DSA:3.40.190.10 77 170 2.3E-17 T 29-03-2018 CVS42_RS12625 31c5d44ae55b4929ed39f8114c9d1a98 280 SUPERFAMILY SSF53850 89 275 4.13E-30 T 29-03-2018 CVS42_RS03450 df0de3b277ad1228b838aafeb9106ecc 352 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 3 233 7.2E-57 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS03450 df0de3b277ad1228b838aafeb9106ecc 352 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 3 337 28.08 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS03450 df0de3b277ad1228b838aafeb9106ecc 352 Gene3D G3DSA:3.30.2340.10 165 298 5.0E-36 T 29-03-2018 CVS42_RS03450 df0de3b277ad1228b838aafeb9106ecc 352 SUPERFAMILY SSF55120 3 334 3.16E-97 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS03450 df0de3b277ad1228b838aafeb9106ecc 352 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 75 88 - T 29-03-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 CVS42_RS03450 df0de3b277ad1228b838aafeb9106ecc 352 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 5 166 4.2E-41 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS03450 df0de3b277ad1228b838aafeb9106ecc 352 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 185 332 3.0E-21 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS02020 7a146e2cf73141a33c18e0e7ebe6c865 338 SMART SM00260 22 164 7.3E-26 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS02020 7a146e2cf73141a33c18e0e7ebe6c865 338 SUPERFAMILY SSF52172 195 313 6.55E-30 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS02020 7a146e2cf73141a33c18e0e7ebe6c865 338 PIRSF PIRSF002867 2 330 1.1E-111 T 29-03-2018 IPR024181 Chemotaxis response regulator CheV CVS42_RS02020 7a146e2cf73141a33c18e0e7ebe6c865 338 Gene3D G3DSA:2.40.50.180 48 111 1.7E-17 T 29-03-2018 CVS42_RS02020 7a146e2cf73141a33c18e0e7ebe6c865 338 SUPERFAMILY SSF50341 12 169 4.71E-34 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS02020 7a146e2cf73141a33c18e0e7ebe6c865 338 Pfam PF01584 CheW-like domain 41 166 1.1E-32 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS02020 7a146e2cf73141a33c18e0e7ebe6c865 338 Pfam PF00072 Response regulator receiver domain 199 316 1.2E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS02020 7a146e2cf73141a33c18e0e7ebe6c865 338 SMART SM00448 197 322 9.8E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS02020 7a146e2cf73141a33c18e0e7ebe6c865 338 Gene3D G3DSA:2.30.30.40 112 158 9.5E-13 T 29-03-2018 CVS42_RS02020 7a146e2cf73141a33c18e0e7ebe6c865 338 Gene3D G3DSA:3.40.50.2300 190 330 5.2E-30 T 29-03-2018 CVS42_RS14840 9a4ac07fb11ce1abddc269477bb067eb 332 Gene3D G3DSA:3.40.50.720 58 309 2.4E-18 T 29-03-2018 CVS42_RS14840 9a4ac07fb11ce1abddc269477bb067eb 332 Pfam PF01370 NAD dependent epimerase/dehydratase family 87 211 3.5E-10 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CVS42_RS14840 9a4ac07fb11ce1abddc269477bb067eb 332 SUPERFAMILY SSF51735 1 300 1.85E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS14840 9a4ac07fb11ce1abddc269477bb067eb 332 Gene3D G3DSA:3.40.50.720 1 57 1.7E-5 T 29-03-2018 CVS42_RS21925 1419854da95402a9b49e7ec2f5968220 249 Gene3D G3DSA:3.40.50.150 53 248 1.3E-40 T 29-03-2018 CVS42_RS21925 1419854da95402a9b49e7ec2f5968220 249 SUPERFAMILY SSF53335 21 243 1.17E-75 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS21925 1419854da95402a9b49e7ec2f5968220 249 Pfam PF04445 Putative SAM-dependent methyltransferase 21 242 4.4E-105 T 29-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CVS42_RS21925 1419854da95402a9b49e7ec2f5968220 249 Gene3D G3DSA:3.40.1630.10 1 52 5.0E-15 T 29-03-2018 CVS42_RS21925 1419854da95402a9b49e7ec2f5968220 249 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 1 244 39.801 T 29-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CVS42_RS03800 bb95143f4b9f11baa1d892633fdd83ad 236 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 21.507 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CVS42_RS03800 bb95143f4b9f11baa1d892633fdd83ad 236 SUPERFAMILY SSF57863 82 207 1.1E-11 T 29-03-2018 CVS42_RS03800 bb95143f4b9f11baa1d892633fdd83ad 236 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 227 6.2E-29 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CVS42_RS03800 bb95143f4b9f11baa1d892633fdd83ad 236 Gene3D G3DSA:2.40.50.140 1 74 8.1E-25 T 29-03-2018 CVS42_RS03800 bb95143f4b9f11baa1d892633fdd83ad 236 Pfam PF02565 Recombination protein O C terminal 81 225 5.1E-23 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CVS42_RS03800 bb95143f4b9f11baa1d892633fdd83ad 236 Pfam PF11967 Recombination protein O N terminal 3 72 2.4E-23 T 29-03-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal CVS42_RS03800 bb95143f4b9f11baa1d892633fdd83ad 236 SUPERFAMILY SSF50249 3 72 1.1E-14 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS09840 29a22bbe6e962ba4940fd3e52e9bb2b4 178 Pfam PF07126 Cell-division protein ZapC 3 166 2.2E-63 T 29-03-2018 IPR009809 Cell division protein ZapC CVS42_RS09840 29a22bbe6e962ba4940fd3e52e9bb2b4 178 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 177 38.302 T 29-03-2018 IPR009809 Cell division protein ZapC CVS42_RS09840 29a22bbe6e962ba4940fd3e52e9bb2b4 178 PIRSF PIRSF010252 1 178 2.6E-65 T 29-03-2018 IPR009809 Cell division protein ZapC CVS42_RS14695 655a2df2835ea932269be724ab7181ce 544 Pfam PF00425 chorismate binding enzyme 252 512 1.1E-84 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CVS42_RS14695 655a2df2835ea932269be724ab7181ce 544 SUPERFAMILY SSF56322 17 520 1.44E-151 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CVS42_RS14695 655a2df2835ea932269be724ab7181ce 544 Pfam PF04715 Anthranilate synthase component I, N terminal region 23 197 1.6E-18 T 29-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CVS42_RS14695 655a2df2835ea932269be724ab7181ce 544 PRINTS PR00095 Anthranilate synthase component I signature 374 387 4.2E-23 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CVS42_RS14695 655a2df2835ea932269be724ab7181ce 544 PRINTS PR00095 Anthranilate synthase component I signature 469 483 4.2E-23 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CVS42_RS14695 655a2df2835ea932269be724ab7181ce 544 PRINTS PR00095 Anthranilate synthase component I signature 454 468 4.2E-23 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CVS42_RS14695 655a2df2835ea932269be724ab7181ce 544 PRINTS PR00095 Anthranilate synthase component I signature 360 373 4.2E-23 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CVS42_RS14695 655a2df2835ea932269be724ab7181ce 544 Gene3D G3DSA:3.60.120.10 7 529 9.6E-154 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CVS42_RS14695 655a2df2835ea932269be724ab7181ce 544 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 21 524 1.0E-207 T 29-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CVS42_RS14695 655a2df2835ea932269be724ab7181ce 544 PIRSF PIRSF001373 1 531 5.2E-247 T 29-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CVS42_RS03395 c3b0274eea2b2895ff8f9fedc4756b5f 232 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 2.5E-60 T 29-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS03395 c3b0274eea2b2895ff8f9fedc4756b5f 232 Gene3D G3DSA:3.40.50.1860 118 215 5.6E-24 T 29-03-2018 CVS42_RS03395 c3b0274eea2b2895ff8f9fedc4756b5f 232 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 231 1.6E-69 T 29-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 CVS42_RS03395 c3b0274eea2b2895ff8f9fedc4756b5f 232 SUPERFAMILY SSF53681 119 229 8.01E-33 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS03395 c3b0274eea2b2895ff8f9fedc4756b5f 232 SUPERFAMILY SSF53681 1 116 3.14E-35 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CVS42_RS03395 c3b0274eea2b2895ff8f9fedc4756b5f 232 Gene3D G3DSA:3.40.50.1860 1 117 1.0E-29 T 29-03-2018 CVS42_RS07075 46ed413a1f597c530c345b7db601c437 403 Gene3D G3DSA:3.30.70.1170 145 210 6.4E-12 T 29-03-2018 CVS42_RS07075 46ed413a1f597c530c345b7db601c437 403 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 384 401 5.0E-27 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS07075 46ed413a1f597c530c345b7db601c437 403 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 347 363 5.0E-27 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS07075 46ed413a1f597c530c345b7db601c437 403 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 297 309 5.0E-27 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS07075 46ed413a1f597c530c345b7db601c437 403 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 201 215 5.0E-27 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS07075 46ed413a1f597c530c345b7db601c437 403 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 230 240 5.0E-27 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS07075 46ed413a1f597c530c345b7db601c437 403 SUPERFAMILY SSF53335 117 402 4.75E-67 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS07075 46ed413a1f597c530c345b7db601c437 403 Gene3D G3DSA:3.40.50.150 211 385 1.1E-51 T 29-03-2018 CVS42_RS07075 46ed413a1f597c530c345b7db601c437 403 Pfam PF01189 16S rRNA methyltransferase RsmB/F 219 388 1.3E-45 T 29-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS13620 3e21005d91b7659a102122188699d2dd 227 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 93 225 1.7E-36 T 29-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CVS42_RS13620 3e21005d91b7659a102122188699d2dd 227 Pfam PF13144 Chaperone for flagella basal body P-ring formation 27 225 6.6E-52 T 29-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CVS42_RS13620 3e21005d91b7659a102122188699d2dd 227 Gene3D G3DSA:3.90.1210.10 103 167 2.6E-7 T 29-03-2018 CVS42_RS13620 3e21005d91b7659a102122188699d2dd 227 SMART SM00858 105 167 7.1E-10 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CVS42_RS07510 8788f6714cdbc80a8e9351b8a1c6ea52 153 Pfam PF03061 Thioesterase superfamily 57 133 4.2E-15 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CVS42_RS07510 8788f6714cdbc80a8e9351b8a1c6ea52 153 Gene3D G3DSA:3.10.129.10 5 152 3.6E-28 T 29-03-2018 CVS42_RS07510 8788f6714cdbc80a8e9351b8a1c6ea52 153 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 140 4.5E-39 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CVS42_RS07510 8788f6714cdbc80a8e9351b8a1c6ea52 153 SUPERFAMILY SSF54637 15 145 5.73E-31 T 29-03-2018 IPR029069 HotDog domain CVS42_RS05405 1293325b51203e5e1b2a2210f167899c 265 SUPERFAMILY SSF46894 12 114 2.83E-11 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS05405 1293325b51203e5e1b2a2210f167899c 265 Pfam PF00486 Transcriptional regulatory protein, C terminal 42 113 4.3E-9 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS05405 1293325b51203e5e1b2a2210f167899c 265 Gene3D G3DSA:1.10.10.10 8 119 6.8E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS05405 1293325b51203e5e1b2a2210f167899c 265 SMART SM00862 39 113 2.5E-7 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS18130 68fd6ca94b1715dd66cab3b6caae6f13 311 Pfam PF02401 LytB protein 3 282 7.2E-94 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CVS42_RS18130 68fd6ca94b1715dd66cab3b6caae6f13 311 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 38.867 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CVS42_RS18130 68fd6ca94b1715dd66cab3b6caae6f13 311 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 5.0E-102 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CVS42_RS18130 68fd6ca94b1715dd66cab3b6caae6f13 311 Gene3D G3DSA:3.40.50.720 13 254 7.0E-4 T 29-03-2018 CVS42_RS15415 5516754979c0e742cd84f51754056ae7 446 PIRSF PIRSF006060 1 445 1.1E-65 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS15415 5516754979c0e742cd84f51754056ae7 446 Pfam PF13520 Amino acid permease 11 421 6.8E-49 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS08265 4c4841425275c96aacbcec1544b9c815 402 Gene3D G3DSA:1.10.150.130 89 212 1.1E-17 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CVS42_RS08265 4c4841425275c96aacbcec1544b9c815 402 Gene3D G3DSA:1.10.443.10 213 388 8.6E-21 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS08265 4c4841425275c96aacbcec1544b9c815 402 Pfam PF13356 Arm DNA-binding domain 4 91 5.3E-11 T 29-03-2018 IPR025166 Integrase, DNA-binding domain CVS42_RS08265 4c4841425275c96aacbcec1544b9c815 402 SUPERFAMILY SSF56349 99 388 5.59E-51 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CVS42_RS08265 4c4841425275c96aacbcec1544b9c815 402 Pfam PF00589 Phage integrase family 234 376 2.6E-15 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS14355 110b728b260c39c55658135de7349bf8 657 Pfam PF12704 MacB-like periplasmic core domain 282 499 1.8E-39 T 29-03-2018 IPR025857 MacB-like periplasmic core domain CVS42_RS14355 110b728b260c39c55658135de7349bf8 657 Pfam PF00005 ABC transporter 30 178 4.7E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS14355 110b728b260c39c55658135de7349bf8 657 Pfam PF02687 FtsX-like permease family 562 650 2.0E-12 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CVS42_RS14355 110b728b260c39c55658135de7349bf8 657 Gene3D G3DSA:3.40.50.300 7 272 4.5E-63 T 29-03-2018 CVS42_RS14355 110b728b260c39c55658135de7349bf8 657 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS14355 110b728b260c39c55658135de7349bf8 657 SMART SM00382 39 226 2.2E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS14355 110b728b260c39c55658135de7349bf8 657 SUPERFAMILY SSF52540 10 236 1.57E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS18015 18ba97c9d781e8265f6d9033f6a50ee9 402 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 400 4.2E-173 T 29-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CVS42_RS18015 18ba97c9d781e8265f6d9033f6a50ee9 402 SUPERFAMILY SSF53649 1 112 4.45E-73 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CVS42_RS18015 18ba97c9d781e8265f6d9033f6a50ee9 402 SUPERFAMILY SSF53649 232 402 4.45E-73 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CVS42_RS18015 18ba97c9d781e8265f6d9033f6a50ee9 402 Gene3D G3DSA:3.30.70.1250 114 220 1.2E-52 T 29-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CVS42_RS18015 18ba97c9d781e8265f6d9033f6a50ee9 402 Pfam PF01676 Metalloenzyme superfamily 2 393 9.0E-40 T 29-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CVS42_RS18015 18ba97c9d781e8265f6d9033f6a50ee9 402 PIRSF PIRSF001491 1 402 6.6E-161 T 29-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CVS42_RS18015 18ba97c9d781e8265f6d9033f6a50ee9 402 SUPERFAMILY SSF143856 115 231 2.22E-50 T 29-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CVS42_RS18015 18ba97c9d781e8265f6d9033f6a50ee9 402 Hamap MF_00740 Phosphopentomutase [deoB]. 1 402 54.297 T 29-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CVS42_RS18015 18ba97c9d781e8265f6d9033f6a50ee9 402 Gene3D G3DSA:3.40.720.10 221 401 7.4E-16 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CVS42_RS10490 904b56b2be019973da47c0e57899d2e1 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CVS42_RS10490 904b56b2be019973da47c0e57899d2e1 294 PIRSF PIRSF006334 14 294 1.3E-99 T 29-03-2018 CVS42_RS10490 904b56b2be019973da47c0e57899d2e1 294 SUPERFAMILY SSF53927 1 146 1.19E-39 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CVS42_RS10490 904b56b2be019973da47c0e57899d2e1 294 Gene3D G3DSA:3.40.140.10 36 170 1.6E-24 T 29-03-2018 CVS42_RS10490 904b56b2be019973da47c0e57899d2e1 294 Gene3D G3DSA:3.40.140.10 182 292 3.3E-16 T 29-03-2018 CVS42_RS10490 904b56b2be019973da47c0e57899d2e1 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 45.058 T 29-03-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CVS42_RS10490 904b56b2be019973da47c0e57899d2e1 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 156 277 4.5E-42 T 29-03-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CVS42_RS10490 904b56b2be019973da47c0e57899d2e1 294 SUPERFAMILY SSF53927 153 292 2.37E-36 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CVS42_RS10490 904b56b2be019973da47c0e57899d2e1 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 61 144 5.5E-11 T 29-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CVS42_RS10490 904b56b2be019973da47c0e57899d2e1 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 291 1.6E-84 T 29-03-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CVS42_RS06405 0a2a62cdd6c1d80db24ed8bfe2f8c695 196 PIRSF PIRSF000013 1 196 2.2E-101 T 29-03-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 CVS42_RS06405 0a2a62cdd6c1d80db24ed8bfe2f8c695 196 Gene3D G3DSA:1.10.468.10 58 194 2.4E-28 T 29-03-2018 CVS42_RS06405 0a2a62cdd6c1d80db24ed8bfe2f8c695 196 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 7 191 1.1E-98 T 29-03-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 CVS42_RS06405 0a2a62cdd6c1d80db24ed8bfe2f8c695 196 SUPERFAMILY SSF48695 14 194 2.72E-61 T 29-03-2018 IPR011031 Multihaem cytochrome CVS42_RS06405 0a2a62cdd6c1d80db24ed8bfe2f8c695 196 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 18 190 2.1E-77 T 29-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal CVS42_RS13320 d13e4ed336fd65216216f9396bf92c1a 357 Gene3D G3DSA:3.20.20.70 9 355 1.9E-125 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS13320 d13e4ed336fd65216216f9396bf92c1a 357 PIRSF PIRSF001361 1 353 1.2E-158 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CVS42_RS13320 d13e4ed336fd65216216f9396bf92c1a 357 SUPERFAMILY SSF51569 8 346 6.32E-136 T 29-03-2018 CVS42_RS13320 d13e4ed336fd65216216f9396bf92c1a 357 Pfam PF00793 DAHP synthetase I family 40 339 2.9E-99 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CVS42_RS13320 d13e4ed336fd65216216f9396bf92c1a 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 11 347 5.1E-156 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CVS42_RS16155 3146baa50c0716c1d5d8fbee9e6af216 760 SUPERFAMILY SSF48452 182 355 1.25E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS16155 3146baa50c0716c1d5d8fbee9e6af216 760 Gene3D G3DSA:1.25.40.10 375 523 0.012 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS16155 3146baa50c0716c1d5d8fbee9e6af216 760 Gene3D G3DSA:1.25.40.10 171 374 5.3E-18 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS16155 3146baa50c0716c1d5d8fbee9e6af216 760 Gene3D G3DSA:1.25.40.10 44 157 0.011 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS16155 3146baa50c0716c1d5d8fbee9e6af216 760 SMART SM00028 288 321 32.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS16155 3146baa50c0716c1d5d8fbee9e6af216 760 SMART SM00028 368 401 120.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS16155 3146baa50c0716c1d5d8fbee9e6af216 760 SMART SM00028 85 118 4.6 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS16155 3146baa50c0716c1d5d8fbee9e6af216 760 SMART SM00028 328 361 180.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS16155 3146baa50c0716c1d5d8fbee9e6af216 760 SMART SM00028 408 441 320.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS16155 3146baa50c0716c1d5d8fbee9e6af216 760 SUPERFAMILY SSF48452 329 440 1.33E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS20065 93814980b741a8ba91972007087284e9 719 Pfam PF13166 AAA domain 28 705 2.8E-118 T 29-03-2018 IPR026866 Protein CR006, P-loop domain CVS42_RS20065 93814980b741a8ba91972007087284e9 719 SUPERFAMILY SSF52540 358 420 2.48E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS20065 93814980b741a8ba91972007087284e9 719 SUPERFAMILY SSF52540 479 573 2.48E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS20065 93814980b741a8ba91972007087284e9 719 SUPERFAMILY SSF52540 1 148 2.48E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS20065 93814980b741a8ba91972007087284e9 719 Gene3D G3DSA:3.40.50.300 1 300 4.4E-14 T 29-03-2018 CVS42_RS20065 93814980b741a8ba91972007087284e9 719 Gene3D G3DSA:1.10.287.510 327 452 0.041 T 29-03-2018 CVS42_RS20065 93814980b741a8ba91972007087284e9 719 Gene3D G3DSA:3.40.50.300 453 611 0.3 T 29-03-2018 CVS42_RS20460 918cb276f1354ce34db7538862a4f50a 323 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 321 1.3E-96 T 29-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family CVS42_RS20460 918cb276f1354ce34db7538862a4f50a 323 SUPERFAMILY SSF53850 28 322 4.43E-76 T 29-03-2018 CVS42_RS20460 918cb276f1354ce34db7538862a4f50a 323 Gene3D G3DSA:3.40.190.10 24 168 2.4E-18 T 29-03-2018 CVS42_RS20460 918cb276f1354ce34db7538862a4f50a 323 Gene3D G3DSA:3.40.190.10 175 323 1.8E-36 T 29-03-2018 CVS42_RS20460 918cb276f1354ce34db7538862a4f50a 323 Pfam PF16868 NMT1-like family 32 321 6.7E-88 T 29-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family CVS42_RS10945 3bd8d32201224b8c24bc6c1adf87e345 269 Gene3D G3DSA:3.40.390.10 55 248 5.9E-26 T 29-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CVS42_RS10945 3bd8d32201224b8c24bc6c1adf87e345 269 SUPERFAMILY SSF55486 59 248 1.25E-35 T 29-03-2018 CVS42_RS10945 3bd8d32201224b8c24bc6c1adf87e345 269 Pfam PF06167 Glucose-regulated metallo-peptidase M90 22 245 1.1E-76 T 29-03-2018 IPR010384 MtfA family CVS42_RS13865 b7a51ebd2d833bf556cbc450df6d6284 363 SUPERFAMILY SSF53955 55 357 6.89E-95 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS13865 b7a51ebd2d833bf556cbc450df6d6284 363 Gene3D G3DSA:1.10.8.350 132 236 7.0E-39 T 29-03-2018 CVS42_RS13865 b7a51ebd2d833bf556cbc450df6d6284 363 Gene3D G3DSA:1.10.8.350 55 131 3.6E-9 T 29-03-2018 CVS42_RS13865 b7a51ebd2d833bf556cbc450df6d6284 363 Pfam PF13406 Transglycosylase SLT domain 60 353 1.9E-95 T 29-03-2018 IPR031304 Transglycosylase SLT domain 2 CVS42_RS13865 b7a51ebd2d833bf556cbc450df6d6284 363 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 65 355 1.3E-117 T 29-03-2018 IPR011757 Lytic transglycosylase MltB CVS42_RS13865 b7a51ebd2d833bf556cbc450df6d6284 363 Gene3D G3DSA:1.10.530.10 241 362 4.1E-31 T 29-03-2018 CVS42_RS10825 67ebe56dcbb0812a7daecb71daa16c73 163 SUPERFAMILY SSF56524 28 162 3.4E-16 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CVS42_RS10825 67ebe56dcbb0812a7daecb71daa16c73 163 Pfam PF00174 Oxidoreductase molybdopterin binding domain 70 137 9.0E-6 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CVS42_RS10825 67ebe56dcbb0812a7daecb71daa16c73 163 Gene3D G3DSA:3.90.420.10 12 163 9.1E-24 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CVS42_RS12160 8f52c30deef36bd2700d4169b83125af 378 Pfam PF10442 FIST C domain 217 356 5.2E-13 T 29-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CVS42_RS12160 8f52c30deef36bd2700d4169b83125af 378 SMART SM00897 23 216 0.0058 T 29-03-2018 IPR013702 FIST domain, N-terminal CVS42_RS12160 8f52c30deef36bd2700d4169b83125af 378 Pfam PF08495 FIST N domain 40 215 8.8E-14 T 29-03-2018 IPR013702 FIST domain, N-terminal CVS42_RS12160 8f52c30deef36bd2700d4169b83125af 378 SMART SM01204 217 358 1.9E-12 T 29-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CVS42_RS20395 d0a47efd223a31bda20b45b30f4dcfbb 222 Pfam PF00005 ABC transporter 18 165 2.0E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS20395 d0a47efd223a31bda20b45b30f4dcfbb 222 SUPERFAMILY SSF52540 1 219 1.06E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS20395 d0a47efd223a31bda20b45b30f4dcfbb 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 8.8E-89 T 29-03-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 CVS42_RS20395 d0a47efd223a31bda20b45b30f4dcfbb 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS20395 d0a47efd223a31bda20b45b30f4dcfbb 222 Gene3D G3DSA:3.40.50.300 1 221 3.8E-61 T 29-03-2018 CVS42_RS20395 d0a47efd223a31bda20b45b30f4dcfbb 222 SMART SM00382 27 214 1.9E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS08135 cc593a106665378183a642ef68c9d1d1 165 Pfam PF04002 RadC-like JAB domain 44 163 1.9E-39 T 29-03-2018 IPR025657 RadC-like JAB domain CVS42_RS08135 cc593a106665378183a642ef68c9d1d1 165 Gene3D G3DSA:3.40.140.10 40 165 4.4E-42 T 29-03-2018 CVS42_RS08135 cc593a106665378183a642ef68c9d1d1 165 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 114 119 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CVS42_RS08135 cc593a106665378183a642ef68c9d1d1 165 TIGRFAM TIGR00608 radc: DNA repair protein RadC 27 165 2.4E-40 T 29-03-2018 IPR001405 RadC protein CVS42_RS17750 c545f597de5b5970a08d4d3921f137ed 428 Pfam PF13356 Arm DNA-binding domain 3 93 4.3E-15 T 29-03-2018 IPR025166 Integrase, DNA-binding domain CVS42_RS17750 c545f597de5b5970a08d4d3921f137ed 428 Gene3D G3DSA:1.10.443.10 228 406 6.1E-24 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS17750 c545f597de5b5970a08d4d3921f137ed 428 Gene3D G3DSA:1.10.150.130 99 227 5.4E-11 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CVS42_RS17750 c545f597de5b5970a08d4d3921f137ed 428 SUPERFAMILY SSF56349 112 406 1.47E-42 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CVS42_RS17750 c545f597de5b5970a08d4d3921f137ed 428 Pfam PF00589 Phage integrase family 228 386 5.5E-14 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS07370 db6d3503c28203b93668debfcace2b00 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CVS42_RS07370 db6d3503c28203b93668debfcace2b00 260 Gene3D G3DSA:3.40.190.10 141 259 1.7E-18 T 29-03-2018 CVS42_RS07370 db6d3503c28203b93668debfcace2b00 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 254 5.3E-64 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS07370 db6d3503c28203b93668debfcace2b00 260 Gene3D G3DSA:3.40.190.10 17 140 1.6E-39 T 29-03-2018 CVS42_RS07370 db6d3503c28203b93668debfcace2b00 260 SUPERFAMILY SSF53850 2 257 4.47E-70 T 29-03-2018 CVS42_RS07370 db6d3503c28203b93668debfcace2b00 260 SMART SM00062 28 256 3.9E-69 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS07370 db6d3503c28203b93668debfcace2b00 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 8 253 9.4E-85 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CVS42_RS07370 db6d3503c28203b93668debfcace2b00 260 SMART SM00079 28 255 2.4E-4 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CVS42_RS08145 bf4ed4bdcdb60230c203093f9147b7ba 139 Pfam PF10980 Protein of unknown function (DUF2787) 18 136 1.0E-32 T 29-03-2018 IPR021248 Protein of unknown function DUF2787 CVS42_RS12785 da0d6290e10b9276ec5bebf6b2e99fbb 335 Gene3D G3DSA:1.10.3470.10 8 335 6.7E-65 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CVS42_RS12785 da0d6290e10b9276ec5bebf6b2e99fbb 335 Pfam PF01032 FecCD transport family 23 328 3.4E-81 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CVS42_RS12785 da0d6290e10b9276ec5bebf6b2e99fbb 335 SUPERFAMILY SSF81345 7 329 3.4E-77 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CVS42_RS07115 572d673cfcb2d8bce15161a9d075d270 204 Gene3D G3DSA:3.40.30.10 1 86 7.0E-26 T 29-03-2018 CVS42_RS07115 572d673cfcb2d8bce15161a9d075d270 204 SUPERFAMILY SSF47616 76 194 1.34E-28 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CVS42_RS07115 572d673cfcb2d8bce15161a9d075d270 204 SUPERFAMILY SSF52833 1 86 5.04E-23 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS07115 572d673cfcb2d8bce15161a9d075d270 204 Gene3D G3DSA:1.20.1050.10 87 198 4.5E-26 T 29-03-2018 CVS42_RS07115 572d673cfcb2d8bce15161a9d075d270 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 112 192 1.0E-10 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CVS42_RS07115 572d673cfcb2d8bce15161a9d075d270 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 6.8E-16 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CVS42_RS15540 3b2076dd72c8d3424ccf15f907c47273 324 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 11 309 2.0E-85 T 29-03-2018 IPR011862 Phosphate binding protein GO:0006810 CVS42_RS15540 3b2076dd72c8d3424ccf15f907c47273 324 SUPERFAMILY SSF53850 35 320 4.62E-73 T 29-03-2018 CVS42_RS15540 3b2076dd72c8d3424ccf15f907c47273 324 Gene3D G3DSA:3.40.190.10 177 322 2.8E-27 T 29-03-2018 CVS42_RS15540 3b2076dd72c8d3424ccf15f907c47273 324 Gene3D G3DSA:3.40.190.10 42 176 1.3E-32 T 29-03-2018 CVS42_RS15540 3b2076dd72c8d3424ccf15f907c47273 324 Pfam PF12849 PBP superfamily domain 37 294 2.3E-32 T 29-03-2018 IPR024370 PBP domain CVS42_RS13330 19722f1fb495a03557e22c90b80ac8c6 341 Pfam PF13609 Gram-negative porin 7 322 3.7E-33 T 29-03-2018 CVS42_RS13330 19722f1fb495a03557e22c90b80ac8c6 341 Gene3D G3DSA:2.40.160.10 9 341 2.7E-46 T 29-03-2018 CVS42_RS13330 19722f1fb495a03557e22c90b80ac8c6 341 SUPERFAMILY SSF56935 21 341 2.32E-55 T 29-03-2018 CVS42_RS20890 9bb969093bac8d9a2bc92ab231485a6a 222 Pfam PF08348 YheO-like PAS domain 22 125 5.8E-33 T 29-03-2018 IPR013559 YheO-like CVS42_RS20890 9bb969093bac8d9a2bc92ab231485a6a 222 Pfam PF13309 HTH domain 153 213 8.4E-15 T 29-03-2018 CVS42_RS20890 9bb969093bac8d9a2bc92ab231485a6a 222 Gene3D G3DSA:1.10.10.60 165 222 8.5E-4 T 29-03-2018 CVS42_RS20890 9bb969093bac8d9a2bc92ab231485a6a 222 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 20 120 1.0E-22 T 29-03-2018 IPR013559 YheO-like CVS42_RS06525 fd06c330ad51415017f556f9f0013c87 407 SUPERFAMILY SSF53187 320 401 1.17E-76 T 29-03-2018 CVS42_RS06525 fd06c330ad51415017f556f9f0013c87 407 SUPERFAMILY SSF53187 1 208 1.17E-76 T 29-03-2018 CVS42_RS06525 fd06c330ad51415017f556f9f0013c87 407 Pfam PF07687 Peptidase dimerisation domain 204 304 1.0E-10 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CVS42_RS06525 fd06c330ad51415017f556f9f0013c87 407 Pfam PF01546 Peptidase family M20/M25/M40 137 400 5.6E-14 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CVS42_RS06525 fd06c330ad51415017f556f9f0013c87 407 PIRSF PIRSF037215 1 405 2.3E-178 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CVS42_RS06525 fd06c330ad51415017f556f9f0013c87 407 Gene3D G3DSA:3.40.630.10 1 406 4.9E-49 T 29-03-2018 CVS42_RS06525 fd06c330ad51415017f556f9f0013c87 407 SUPERFAMILY SSF55031 207 317 3.87E-39 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CVS42_RS06525 fd06c330ad51415017f556f9f0013c87 407 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 403 8.0E-158 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CVS42_RS06525 fd06c330ad51415017f556f9f0013c87 407 Hamap MF_00550 Peptidase T [pepT]. 1 402 53.584 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CVS42_RS06525 fd06c330ad51415017f556f9f0013c87 407 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 136 175 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CVS42_RS06525 fd06c330ad51415017f556f9f0013c87 407 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 72 81 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 631 4.5E-83 T 29-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 TIGRFAM TIGR03145 cyt_nit_nrfE: cytochrome c nitrate reductase biogenesis protein NrfE 2 629 4.9E-293 T 29-03-2018 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 632 1.9E-212 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 Pfam PF01578 Cytochrome C assembly protein 89 295 5.4E-48 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 6.8E-22 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 6.8E-22 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 6.8E-22 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 6.8E-22 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 6.8E-22 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 6.8E-22 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 5.1E-75 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 5.1E-75 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 5.1E-75 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 5.1E-75 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 5.1E-75 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 5.1E-75 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 5.1E-75 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS08685 ebeedbc1e5e12ca49b7e30bd7e0e0439 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 5.1E-75 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS15745 4df44978519b7fdaa84ffe4bd77e5f93 381 Pfam PF01734 Patatin-like phospholipase 8 219 3.7E-20 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CVS42_RS15745 4df44978519b7fdaa84ffe4bd77e5f93 381 SUPERFAMILY SSF52151 1 288 3.66E-48 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CVS42_RS15745 4df44978519b7fdaa84ffe4bd77e5f93 381 Gene3D G3DSA:3.40.1090.10 1 268 4.3E-37 T 29-03-2018 CVS42_RS21905 38dcb7bd48193e59053dba9d78ed2b63 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 106 1.1E-39 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CVS42_RS21905 38dcb7bd48193e59053dba9d78ed2b63 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 29-03-2018 CVS42_RS21905 38dcb7bd48193e59053dba9d78ed2b63 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 29-03-2018 CVS42_RS21905 38dcb7bd48193e59053dba9d78ed2b63 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 29-03-2018 CVS42_RS21905 38dcb7bd48193e59053dba9d78ed2b63 108 Pfam PF00085 Thioredoxin 5 105 9.1E-35 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 CVS42_RS21905 38dcb7bd48193e59053dba9d78ed2b63 108 PIRSF PIRSF000077 2 108 1.6E-44 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CVS42_RS21905 38dcb7bd48193e59053dba9d78ed2b63 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CVS42_RS21905 38dcb7bd48193e59053dba9d78ed2b63 108 Gene3D G3DSA:3.40.30.10 5 72 1.2E-27 T 29-03-2018 CVS42_RS21905 38dcb7bd48193e59053dba9d78ed2b63 108 Gene3D G3DSA:3.40.30.10 73 107 5.6E-5 T 29-03-2018 CVS42_RS21905 38dcb7bd48193e59053dba9d78ed2b63 108 SUPERFAMILY SSF52833 2 107 3.03E-40 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS05900 459c5358e1efc234129c12869970de31 70 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 2 65 4.3E-18 T 29-03-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 CVS42_RS05900 459c5358e1efc234129c12869970de31 70 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 2 65 2.9E-25 T 29-03-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 CVS42_RS06385 e3c93a9aec875066281cfe0f701d4fe8 829 SMART SM00926 41 95 6.3E-14 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS06385 e3c93a9aec875066281cfe0f701d4fe8 829 Gene3D G3DSA:2.40.40.20 668 829 5.6E-38 T 29-03-2018 CVS42_RS06385 e3c93a9aec875066281cfe0f701d4fe8 829 Gene3D G3DSA:3.40.50.740 101 290 7.5E-39 T 29-03-2018 CVS42_RS06385 e3c93a9aec875066281cfe0f701d4fe8 829 Gene3D G3DSA:3.40.50.740 306 667 2.1E-67 T 29-03-2018 CVS42_RS06385 e3c93a9aec875066281cfe0f701d4fe8 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 2.4E-17 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS06385 e3c93a9aec875066281cfe0f701d4fe8 829 Pfam PF01568 Molydopterin dinucleotide binding domain 715 823 5.1E-28 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CVS42_RS06385 e3c93a9aec875066281cfe0f701d4fe8 829 SUPERFAMILY SSF50692 689 829 1.76E-43 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CVS42_RS06385 e3c93a9aec875066281cfe0f701d4fe8 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 829 0.0 T 29-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 CVS42_RS06385 e3c93a9aec875066281cfe0f701d4fe8 829 SUPERFAMILY SSF53706 38 700 4.19E-206 T 29-03-2018 CVS42_RS06385 e3c93a9aec875066281cfe0f701d4fe8 829 Hamap MF_01630 Nitrate reductase [napA]. 1 829 29.774 T 29-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 CVS42_RS06385 e3c93a9aec875066281cfe0f701d4fe8 829 Gene3D G3DSA:2.20.25.90 36 97 1.3E-14 T 29-03-2018 CVS42_RS06385 e3c93a9aec875066281cfe0f701d4fe8 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 3.9E-90 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS06385 e3c93a9aec875066281cfe0f701d4fe8 829 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 24 2.5E-5 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CVS42_RS06385 e3c93a9aec875066281cfe0f701d4fe8 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CVS42_RS06385 e3c93a9aec875066281cfe0f701d4fe8 829 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 23 1.1E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CVS42_RS02640 58abe653b38604304caced804156067b 328 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 86 104 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CVS42_RS02640 58abe653b38604304caced804156067b 328 Pfam PF01207 Dihydrouridine synthase (Dus) 8 306 1.9E-92 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CVS42_RS02640 58abe653b38604304caced804156067b 328 Gene3D G3DSA:3.20.20.70 2 241 2.2E-47 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS02640 58abe653b38604304caced804156067b 328 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 320 52.708 T 29-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CVS42_RS02640 58abe653b38604304caced804156067b 328 PIRSF PIRSF006621 1 319 2.6E-76 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CVS42_RS02640 58abe653b38604304caced804156067b 328 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 5 319 8.6E-159 T 29-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CVS42_RS02640 58abe653b38604304caced804156067b 328 SUPERFAMILY SSF51395 5 310 2.44E-79 T 29-03-2018 CVS42_RS09790 2711c0f90b14b52eb947a935f0218d22 204 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 7 182 3.4E-82 T 29-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CVS42_RS09790 2711c0f90b14b52eb947a935f0218d22 204 Gene3D G3DSA:1.10.760.10 38 204 1.1E-26 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS09790 2711c0f90b14b52eb947a935f0218d22 204 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 7 183 1.2E-79 T 29-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CVS42_RS09790 2711c0f90b14b52eb947a935f0218d22 204 SUPERFAMILY SSF46626 21 200 1.74E-29 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS06340 78c060219d1934a0763a99f07dd3eb19 304 Gene3D G3DSA:3.40.50.10680 89 303 9.7E-38 T 29-03-2018 CVS42_RS06340 78c060219d1934a0763a99f07dd3eb19 304 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 256 2.3E-93 T 29-03-2018 IPR010119 Gluconeogenesis factor CVS42_RS06340 78c060219d1934a0763a99f07dd3eb19 304 Hamap MF_00973 Gluconeogenesis factor. 8 299 31.157 T 29-03-2018 IPR010119 Gluconeogenesis factor CVS42_RS06340 78c060219d1934a0763a99f07dd3eb19 304 Pfam PF01933 Uncharacterised protein family UPF0052 12 290 5.7E-74 T 29-03-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CVS42_RS06340 78c060219d1934a0763a99f07dd3eb19 304 SUPERFAMILY SSF142338 11 293 1.05E-82 T 29-03-2018 CVS42_RS11545 3f59ea79ac70789ae26b74bd5aad23e4 158 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 29-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 CVS42_RS11545 3f59ea79ac70789ae26b74bd5aad23e4 158 PRINTS PR01011 Glutathione peroxidase family signature 21 38 6.6E-21 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CVS42_RS11545 3f59ea79ac70789ae26b74bd5aad23e4 158 PRINTS PR01011 Glutathione peroxidase family signature 56 72 6.6E-21 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CVS42_RS11545 3f59ea79ac70789ae26b74bd5aad23e4 158 PRINTS PR01011 Glutathione peroxidase family signature 122 131 6.6E-21 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CVS42_RS11545 3f59ea79ac70789ae26b74bd5aad23e4 158 Gene3D G3DSA:3.40.30.10 1 158 3.4E-50 T 29-03-2018 CVS42_RS11545 3f59ea79ac70789ae26b74bd5aad23e4 158 Pfam PF00255 Glutathione peroxidase 6 110 4.6E-42 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CVS42_RS11545 3f59ea79ac70789ae26b74bd5aad23e4 158 SUPERFAMILY SSF52833 1 158 5.85E-63 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS11545 3f59ea79ac70789ae26b74bd5aad23e4 158 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 29-03-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 CVS42_RS11545 3f59ea79ac70789ae26b74bd5aad23e4 158 PIRSF PIRSF000303 2 158 1.9E-63 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 SUPERFAMILY SSF81901 29 216 1.05E-27 T 29-03-2018 CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 Gene3D G3DSA:2.60.40.1180 325 455 2.4E-22 T 29-03-2018 CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 Gene3D G3DSA:2.60.40.1180 134 166 5.9E-4 T 29-03-2018 CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 Gene3D G3DSA:2.60.40.1180 226 290 2.4E-9 T 29-03-2018 CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 Gene3D G3DSA:2.60.40.1180 291 324 0.0055 T 29-03-2018 CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 Gene3D G3DSA:2.60.40.1180 48 133 4.1E-13 T 29-03-2018 CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 Gene3D G3DSA:2.60.40.1180 167 225 1.8E-11 T 29-03-2018 CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 Pfam PF08238 Sel1 repeat 345 379 0.018 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 Pfam PF08238 Sel1 repeat 151 182 0.47 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 Pfam PF08238 Sel1 repeat 117 149 0.0045 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 Pfam PF08238 Sel1 repeat 184 216 0.012 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 Pfam PF08238 Sel1 repeat 247 282 9.6E-7 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 Pfam PF08238 Sel1 repeat 50 67 1.3 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 Pfam PF08238 Sel1 repeat 295 310 10.0 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 Pfam PF08238 Sel1 repeat 381 414 2.4E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 Pfam PF08238 Sel1 repeat 80 114 1.4E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 SMART SM00671 183 218 0.034 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 SMART SM00671 115 149 14.0 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 SMART SM00671 380 415 0.018 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 SMART SM00671 247 282 6.4E-5 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 SMART SM00671 79 114 1.4E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 SMART SM00671 312 343 1.6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 SMART SM00671 150 182 3.6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 SMART SM00671 344 379 2.6E-5 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 SMART SM00671 38 69 3.1 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS19460 66786f57744f1dcf92ff338f112af3ad 455 SUPERFAMILY SSF81901 232 417 8.72E-35 T 29-03-2018 CVS42_RS21140 d9f402ea8a3c94de914718e32470b311 150 SUPERFAMILY SSF46785 2 133 4.13E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS21140 d9f402ea8a3c94de914718e32470b311 150 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 29-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CVS42_RS21140 d9f402ea8a3c94de914718e32470b311 150 Gene3D G3DSA:1.10.10.10 1 137 5.1E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS21140 d9f402ea8a3c94de914718e32470b311 150 Pfam PF02082 Transcriptional regulator 1 80 2.6E-23 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CVS42_RS21140 d9f402ea8a3c94de914718e32470b311 150 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 129 1.0E-32 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CVS42_RS02095 8493f35624de37d0ae39c31a18d0143c 459 SMART SM00490 256 337 1.4E-27 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS02095 8493f35624de37d0ae39c31a18d0143c 459 Gene3D G3DSA:3.40.50.300 221 457 7.6E-42 T 29-03-2018 CVS42_RS02095 8493f35624de37d0ae39c31a18d0143c 459 Pfam PF00271 Helicase conserved C-terminal domain 231 337 3.3E-26 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS02095 8493f35624de37d0ae39c31a18d0143c 459 SMART SM00487 23 220 3.2E-51 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS02095 8493f35624de37d0ae39c31a18d0143c 459 Pfam PF03880 DbpA RNA binding domain 386 456 2.5E-23 T 29-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CVS42_RS02095 8493f35624de37d0ae39c31a18d0143c 459 Gene3D G3DSA:3.40.50.300 10 220 5.5E-57 T 29-03-2018 CVS42_RS02095 8493f35624de37d0ae39c31a18d0143c 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CVS42_RS02095 8493f35624de37d0ae39c31a18d0143c 459 SUPERFAMILY SSF52540 73 358 1.35E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS02095 8493f35624de37d0ae39c31a18d0143c 459 Pfam PF00270 DEAD/DEAH box helicase 28 192 1.4E-45 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CVS42_RS02750 8819e7601465c97d01f33ffc9b65b449 119 Pfam PF17209 Hfq protein 21 80 4.9E-27 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CVS42_RS02750 8819e7601465c97d01f33ffc9b65b449 119 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 20 78 1.0E-21 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CVS42_RS02750 8819e7601465c97d01f33ffc9b65b449 119 SUPERFAMILY SSF50182 19 81 1.11E-17 T 29-03-2018 IPR010920 LSM domain CVS42_RS02750 8819e7601465c97d01f33ffc9b65b449 119 Gene3D G3DSA:2.30.30.100 18 81 5.0E-22 T 29-03-2018 CVS42_RS02750 8819e7601465c97d01f33ffc9b65b449 119 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 13 79 26.125 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CVS42_RS07670 c8d5a53a168cd9cf28b4f1c1953bf7a2 263 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 13 250 1.8E-67 T 29-03-2018 IPR013360 Pilus biogenesis/stability type IV, PilW CVS42_RS07670 c8d5a53a168cd9cf28b4f1c1953bf7a2 263 Pfam PF13181 Tetratricopeptide repeat 151 183 0.021 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS07670 c8d5a53a168cd9cf28b4f1c1953bf7a2 263 Pfam PF14559 Tetratricopeptide repeat 58 101 7.3E-6 T 29-03-2018 CVS42_RS07670 c8d5a53a168cd9cf28b4f1c1953bf7a2 263 Gene3D G3DSA:1.25.40.10 126 189 2.0E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS07670 c8d5a53a168cd9cf28b4f1c1953bf7a2 263 Gene3D G3DSA:1.25.40.10 190 263 0.014 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS07670 c8d5a53a168cd9cf28b4f1c1953bf7a2 263 Gene3D G3DSA:1.25.40.10 98 125 7.5E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS07670 c8d5a53a168cd9cf28b4f1c1953bf7a2 263 SMART SM00028 115 148 120.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS07670 c8d5a53a168cd9cf28b4f1c1953bf7a2 263 SMART SM00028 151 184 6.5 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS07670 c8d5a53a168cd9cf28b4f1c1953bf7a2 263 SMART SM00028 81 114 0.0079 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS07670 c8d5a53a168cd9cf28b4f1c1953bf7a2 263 SMART SM00028 47 80 0.021 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS07670 c8d5a53a168cd9cf28b4f1c1953bf7a2 263 Gene3D G3DSA:1.25.40.10 41 97 3.8E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS07670 c8d5a53a168cd9cf28b4f1c1953bf7a2 263 Pfam PF13431 Tetratricopeptide repeat 104 135 1.1E-7 T 29-03-2018 CVS42_RS07670 c8d5a53a168cd9cf28b4f1c1953bf7a2 263 SUPERFAMILY SSF48452 52 215 2.15E-21 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS17385 50b994c41a742cce8791e7d13ca4b7a8 375 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 363 36.36 T 29-03-2018 IPR014524 Outer membrane protein assembly factor BamC CVS42_RS17385 50b994c41a742cce8791e7d13ca4b7a8 375 Pfam PF06804 NlpB/DapX lipoprotein 49 362 2.1E-95 T 29-03-2018 IPR010653 NlpB/DapX lipoprotein CVS42_RS15275 afc6f2d1d8823ce0022862a0747cd947 108 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 8 105 4.1E-17 T 29-03-2018 IPR009320 Antitoxin CbeA GO:0051495 CVS42_RS15275 afc6f2d1d8823ce0022862a0747cd947 108 SUPERFAMILY SSF143737 6 105 1.57E-21 T 29-03-2018 CVS42_RS15275 afc6f2d1d8823ce0022862a0747cd947 108 Gene3D G3DSA:3.30.450.20 16 108 2.0E-22 T 29-03-2018 CVS42_RS08105 afc6f2d1d8823ce0022862a0747cd947 108 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 8 105 4.1E-17 T 29-03-2018 IPR009320 Antitoxin CbeA GO:0051495 CVS42_RS08105 afc6f2d1d8823ce0022862a0747cd947 108 SUPERFAMILY SSF143737 6 105 1.57E-21 T 29-03-2018 CVS42_RS08105 afc6f2d1d8823ce0022862a0747cd947 108 Gene3D G3DSA:3.30.450.20 16 108 2.0E-22 T 29-03-2018 CVS42_RS19210 b67ded534646b30145517a2b01507dde 241 SMART SM00382 28 202 5.1E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS19210 b67ded534646b30145517a2b01507dde 241 Pfam PF00005 ABC transporter 20 166 1.4E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS19210 b67ded534646b30145517a2b01507dde 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 5.3E-120 T 29-03-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 CVS42_RS19210 b67ded534646b30145517a2b01507dde 241 SUPERFAMILY SSF52540 3 236 5.58E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS19210 b67ded534646b30145517a2b01507dde 241 Gene3D G3DSA:3.40.50.300 1 236 1.7E-59 T 29-03-2018 CVS42_RS19210 b67ded534646b30145517a2b01507dde 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 4.2E-8 T 29-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CVS42_RS19210 b67ded534646b30145517a2b01507dde 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS14175 d427adc791350a773f57e04a5f03c50d 98 Pfam PF09904 Winged helix-turn helix 6 95 2.5E-40 T 29-03-2018 IPR017162 Uncharacterised conserved protein UCP037266 CVS42_RS14175 d427adc791350a773f57e04a5f03c50d 98 PIRSF PIRSF037266 1 98 3.2E-39 T 29-03-2018 IPR017162 Uncharacterised conserved protein UCP037266 CVS42_RS03460 4651e57ebc2dc3d9fa5b64b19811c397 205 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 3 203 9.8E-77 T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CVS42_RS03460 4651e57ebc2dc3d9fa5b64b19811c397 205 SUPERFAMILY SSF53335 9 202 1.7E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS03460 4651e57ebc2dc3d9fa5b64b19811c397 205 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 127 142 - T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CVS42_RS03460 4651e57ebc2dc3d9fa5b64b19811c397 205 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 4 202 1.9E-66 T 29-03-2018 CVS42_RS03460 4651e57ebc2dc3d9fa5b64b19811c397 205 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 2 205 36.425 T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CVS42_RS03460 4651e57ebc2dc3d9fa5b64b19811c397 205 Gene3D G3DSA:3.40.50.150 2 203 1.2E-32 T 29-03-2018 CVS42_RS19855 492e02aa209ba6decd83e8993249cbef 296 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 3.2E-103 T 29-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CVS42_RS19855 492e02aa209ba6decd83e8993249cbef 296 Gene3D G3DSA:3.20.20.220 1 296 7.6E-96 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like CVS42_RS19855 492e02aa209ba6decd83e8993249cbef 296 SUPERFAMILY SSF51730 22 294 1.59E-95 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like CVS42_RS19855 492e02aa209ba6decd83e8993249cbef 296 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 1.3E-102 T 29-03-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 CVS42_RS12640 40b44d2324975cc2d89824e1086895ae 526 SUPERFAMILY SSF53474 111 343 9.28E-23 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS12640 40b44d2324975cc2d89824e1086895ae 526 Gene3D G3DSA:3.40.50.1820 107 378 1.1E-20 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS12640 40b44d2324975cc2d89824e1086895ae 526 Pfam PF12146 Serine aminopeptidase, S33 118 342 1.5E-11 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CVS42_RS08760 2754f9687a84b080fd64750994b1d711 305 Pfam PF00892 EamA-like transporter family 149 285 9.4E-13 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS08760 2754f9687a84b080fd64750994b1d711 305 Pfam PF00892 EamA-like transporter family 4 134 2.5E-12 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS08760 2754f9687a84b080fd64750994b1d711 305 SUPERFAMILY SSF103481 35 136 1.28E-11 T 29-03-2018 CVS42_RS08760 2754f9687a84b080fd64750994b1d711 305 SUPERFAMILY SSF103481 185 288 3.92E-7 T 29-03-2018 CVS42_RS06865 87ebba8d1827ede7bb99b9c51416e5d8 146 TIGRFAM TIGR02695 azurin: azurin 22 145 2.6E-55 T 29-03-2018 IPR014068 Azurin CVS42_RS06865 87ebba8d1827ede7bb99b9c51416e5d8 146 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 21 146 2.3E-23 T 29-03-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 CVS42_RS06865 87ebba8d1827ede7bb99b9c51416e5d8 146 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 26 144 9.0E-41 T 29-03-2018 CVS42_RS06865 87ebba8d1827ede7bb99b9c51416e5d8 146 SUPERFAMILY SSF49503 21 145 3.95E-43 T 29-03-2018 IPR008972 Cupredoxin CVS42_RS06865 87ebba8d1827ede7bb99b9c51416e5d8 146 Gene3D G3DSA:2.60.40.420 20 146 8.0E-13 T 29-03-2018 IPR008972 Cupredoxin CVS42_RS14195 a5b27c1ca2a3d37ab58ed0cd9b866eaf 251 SUPERFAMILY SSF53167 4 247 4.71E-75 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CVS42_RS14195 a5b27c1ca2a3d37ab58ed0cd9b866eaf 251 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 4 251 6.0E-120 T 29-03-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 CVS42_RS14195 a5b27c1ca2a3d37ab58ed0cd9b866eaf 251 Gene3D G3DSA:3.40.50.1580 1 251 2.0E-57 T 29-03-2018 CVS42_RS14195 a5b27c1ca2a3d37ab58ed0cd9b866eaf 251 Pfam PF01048 Phosphorylase superfamily 19 226 2.9E-41 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CVS42_RS14195 a5b27c1ca2a3d37ab58ed0cd9b866eaf 251 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 64 79 - T 29-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS21890 ccc8f1757ff81a256e2c147baa965aa1 489 Gene3D G3DSA:1.20.5.570 460 487 4.5E-18 T 29-03-2018 CVS42_RS21890 ccc8f1757ff81a256e2c147baa965aa1 489 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 5.3E-167 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CVS42_RS21890 ccc8f1757ff81a256e2c147baa965aa1 489 SUPERFAMILY SSF50475 3 322 6.28E-123 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CVS42_RS21890 ccc8f1757ff81a256e2c147baa965aa1 489 Gene3D G3DSA:3.40.1670.10 323 459 3.4E-52 T 29-03-2018 CVS42_RS21890 ccc8f1757ff81a256e2c147baa965aa1 489 SUPERFAMILY SSF143968 323 485 1.05E-67 T 29-03-2018 CVS42_RS21890 ccc8f1757ff81a256e2c147baa965aa1 489 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 1.1E-172 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CVS42_RS21890 ccc8f1757ff81a256e2c147baa965aa1 489 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 73.084 T 29-03-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CVS42_RS08365 3e44aaa1936c9bd7d576e44e495380a9 162 Gene3D G3DSA:3.30.1330.60 29 162 1.1E-33 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS08365 3e44aaa1936c9bd7d576e44e495380a9 162 Pfam PF00691 OmpA family 59 153 4.0E-20 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS08365 3e44aaa1936c9bd7d576e44e495380a9 162 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 122 141 7.7E-6 T 29-03-2018 CVS42_RS08365 3e44aaa1936c9bd7d576e44e495380a9 162 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 142 162 7.7E-6 T 29-03-2018 CVS42_RS08365 3e44aaa1936c9bd7d576e44e495380a9 162 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 7.7E-6 T 29-03-2018 CVS42_RS08365 3e44aaa1936c9bd7d576e44e495380a9 162 SUPERFAMILY SSF103088 40 159 3.53E-32 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS08365 3e44aaa1936c9bd7d576e44e495380a9 162 PRINTS PR01021 OMPA domain signature 59 81 1.6E-11 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS08365 3e44aaa1936c9bd7d576e44e495380a9 162 PRINTS PR01021 OMPA domain signature 104 120 1.6E-11 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS08365 3e44aaa1936c9bd7d576e44e495380a9 162 PRINTS PR01021 OMPA domain signature 89 104 1.6E-11 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS07815 7fcf6667936113076c5916e5ed2b5bc0 751 Gene3D G3DSA:3.40.720.10 360 700 1.9E-15 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CVS42_RS07815 7fcf6667936113076c5916e5ed2b5bc0 751 SUPERFAMILY SSF53649 465 677 1.39E-15 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CVS42_RS07815 7fcf6667936113076c5916e5ed2b5bc0 751 Pfam PF00884 Sulfatase 466 678 2.2E-19 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CVS42_RS16200 f92d432c7d69c389da5e4b4f8271b5ae 306 SUPERFAMILY SSF53850 93 295 5.43E-36 T 29-03-2018 CVS42_RS16200 f92d432c7d69c389da5e4b4f8271b5ae 306 Pfam PF03466 LysR substrate binding domain 91 290 9.9E-36 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS16200 f92d432c7d69c389da5e4b4f8271b5ae 306 SUPERFAMILY SSF46785 3 85 2.16E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS16200 f92d432c7d69c389da5e4b4f8271b5ae 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.7E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS16200 f92d432c7d69c389da5e4b4f8271b5ae 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.7E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS16200 f92d432c7d69c389da5e4b4f8271b5ae 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.7E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS16200 f92d432c7d69c389da5e4b4f8271b5ae 306 Gene3D G3DSA:3.40.190.10 179 263 6.8E-19 T 29-03-2018 CVS42_RS16200 f92d432c7d69c389da5e4b4f8271b5ae 306 Gene3D G3DSA:1.10.10.10 3 88 2.5E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS16200 f92d432c7d69c389da5e4b4f8271b5ae 306 Gene3D G3DSA:3.40.190.10 91 178 3.7E-14 T 29-03-2018 CVS42_RS16200 f92d432c7d69c389da5e4b4f8271b5ae 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 8.2E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS12480 05a8babb5c0ff0d093737775e6728e88 252 SUPERFAMILY SSF100950 73 233 3.64E-28 T 29-03-2018 CVS42_RS12480 05a8babb5c0ff0d093737775e6728e88 252 SMART SM01134 72 233 4.2E-71 T 29-03-2018 CVS42_RS12480 05a8babb5c0ff0d093737775e6728e88 252 SMART SM00420 6 58 1.0E-22 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CVS42_RS12480 05a8babb5c0ff0d093737775e6728e88 252 SUPERFAMILY SSF46785 3 77 7.44E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS12480 05a8babb5c0ff0d093737775e6728e88 252 Gene3D G3DSA:3.40.50.1360 65 229 2.1E-39 T 29-03-2018 CVS42_RS12480 05a8babb5c0ff0d093737775e6728e88 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.2E-11 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CVS42_RS12480 05a8babb5c0ff0d093737775e6728e88 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.2E-11 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CVS42_RS12480 05a8babb5c0ff0d093737775e6728e88 252 Pfam PF00455 DeoR C terminal sensor domain 75 232 3.8E-54 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CVS42_RS12480 05a8babb5c0ff0d093737775e6728e88 252 Gene3D G3DSA:1.10.10.10 1 64 1.0E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS12480 05a8babb5c0ff0d093737775e6728e88 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CVS42_RS12480 05a8babb5c0ff0d093737775e6728e88 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 62 2.9E-22 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CVS42_RS10505 00eec182229ee2e43a83082235a0c0a0 506 SUPERFAMILY SSF48173 223 492 1.09E-60 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CVS42_RS10505 00eec182229ee2e43a83082235a0c0a0 506 Gene3D G3DSA:1.10.579.10 315 493 1.4E-29 T 29-03-2018 CVS42_RS10505 00eec182229ee2e43a83082235a0c0a0 506 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 4 217 7.7E-65 T 29-03-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein CVS42_RS10505 00eec182229ee2e43a83082235a0c0a0 506 Gene3D G3DSA:1.25.40.80 105 314 1.0E-39 T 29-03-2018 CVS42_RS21545 70833463bdeeadcdbd2291188987a65a 112 Pfam PF10973 Protein of unknown function (DUF2799) 28 109 8.4E-19 T 29-03-2018 IPR021242 Protein of unknown function DUF2799 CVS42_RS11590 c4cabb3387b2e1997eed8cf2355f3444 547 Gene3D G3DSA:3.50.50.60 1 384 2.1E-45 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS11590 c4cabb3387b2e1997eed8cf2355f3444 547 SUPERFAMILY SSF54373 205 304 3.69E-30 T 29-03-2018 CVS42_RS11590 c4cabb3387b2e1997eed8cf2355f3444 547 Pfam PF01946 Thi4 family 4 61 2.0E-7 T 29-03-2018 CVS42_RS11590 c4cabb3387b2e1997eed8cf2355f3444 547 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 444 544 9.1E-47 T 29-03-2018 CVS42_RS11590 c4cabb3387b2e1997eed8cf2355f3444 547 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 336 355 9.0E-5 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS11590 c4cabb3387b2e1997eed8cf2355f3444 547 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 9.0E-5 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS11590 c4cabb3387b2e1997eed8cf2355f3444 547 SUPERFAMILY SSF51905 1 205 3.86E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS11590 c4cabb3387b2e1997eed8cf2355f3444 547 SUPERFAMILY SSF51905 305 446 3.86E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS11590 c4cabb3387b2e1997eed8cf2355f3444 547 SUPERFAMILY SSF54862 448 547 3.09E-25 T 29-03-2018 CVS42_RS00430 3042720934aaa086c5f407eafe19f774 758 Gene3D G3DSA:3.30.70.270 314 494 7.1E-61 T 29-03-2018 CVS42_RS00430 3042720934aaa086c5f407eafe19f774 758 SUPERFAMILY SSF55073 336 495 3.06E-49 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS00430 3042720934aaa086c5f407eafe19f774 758 SMART SM00052 501 748 6.5E-80 T 29-03-2018 IPR001633 EAL domain CVS42_RS00430 3042720934aaa086c5f407eafe19f774 758 Gene3D G3DSA:3.20.20.450 503 757 1.3E-75 T 29-03-2018 IPR001633 EAL domain CVS42_RS00430 3042720934aaa086c5f407eafe19f774 758 Pfam PF00990 Diguanylate cyclase, GGDEF domain 331 489 9.4E-52 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS00430 3042720934aaa086c5f407eafe19f774 758 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 327 491 6.3E-47 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS00430 3042720934aaa086c5f407eafe19f774 758 SUPERFAMILY SSF141868 506 754 9.15E-73 T 29-03-2018 IPR001633 EAL domain CVS42_RS00430 3042720934aaa086c5f407eafe19f774 758 Pfam PF00563 EAL domain 507 743 4.4E-71 T 29-03-2018 IPR001633 EAL domain CVS42_RS00430 3042720934aaa086c5f407eafe19f774 758 SMART SM00267 320 493 1.4E-71 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS00905 bacc672a0bd4efc498f4a70fca2fc16e 408 Pfam PF03222 Tryptophan/tyrosine permease family 3 394 2.9E-127 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CVS42_RS00905 bacc672a0bd4efc498f4a70fca2fc16e 408 PRINTS PR00166 Aromatic amino acid permease signature 84 104 1.2E-82 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS00905 bacc672a0bd4efc498f4a70fca2fc16e 408 PRINTS PR00166 Aromatic amino acid permease signature 281 300 1.2E-82 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS00905 bacc672a0bd4efc498f4a70fca2fc16e 408 PRINTS PR00166 Aromatic amino acid permease signature 220 239 1.2E-82 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS00905 bacc672a0bd4efc498f4a70fca2fc16e 408 PRINTS PR00166 Aromatic amino acid permease signature 144 164 1.2E-82 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS00905 bacc672a0bd4efc498f4a70fca2fc16e 408 PRINTS PR00166 Aromatic amino acid permease signature 12 35 1.2E-82 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS00905 bacc672a0bd4efc498f4a70fca2fc16e 408 PRINTS PR00166 Aromatic amino acid permease signature 182 204 1.2E-82 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS00905 bacc672a0bd4efc498f4a70fca2fc16e 408 PRINTS PR00166 Aromatic amino acid permease signature 39 58 1.2E-82 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS00905 bacc672a0bd4efc498f4a70fca2fc16e 408 PRINTS PR00166 Aromatic amino acid permease signature 315 333 1.2E-82 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS00905 bacc672a0bd4efc498f4a70fca2fc16e 408 PRINTS PR00166 Aromatic amino acid permease signature 336 355 1.2E-82 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS00905 bacc672a0bd4efc498f4a70fca2fc16e 408 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 9 387 2.4E-129 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS12780 3bc913c3ce86746e8809a7fc7bc7e144 249 Pfam PF00005 ABC transporter 15 162 2.1E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS12780 3bc913c3ce86746e8809a7fc7bc7e144 249 Gene3D G3DSA:3.40.50.300 12 227 5.1E-47 T 29-03-2018 CVS42_RS12780 3bc913c3ce86746e8809a7fc7bc7e144 249 SMART SM00382 22 211 2.7E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS12780 3bc913c3ce86746e8809a7fc7bc7e144 249 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS12780 3bc913c3ce86746e8809a7fc7bc7e144 249 SUPERFAMILY SSF52540 13 219 1.27E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00360 c1132ed8af2f55eee5eec29ebb79af93 100 Gene3D G3DSA:3.30.70.120 3 100 1.6E-13 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CVS42_RS00360 c1132ed8af2f55eee5eec29ebb79af93 100 SUPERFAMILY SSF54913 1 100 1.86E-19 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CVS42_RS13515 eeed1f0cba9a9092b3d2942522b62e16 447 Pfam PF00072 Response regulator receiver domain 6 115 5.3E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS13515 eeed1f0cba9a9092b3d2942522b62e16 447 SMART SM00448 4 115 4.0E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS13515 eeed1f0cba9a9092b3d2942522b62e16 447 SUPERFAMILY SSF52540 133 370 2.61E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS13515 eeed1f0cba9a9092b3d2942522b62e16 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CVS42_RS13515 eeed1f0cba9a9092b3d2942522b62e16 447 Pfam PF02954 Bacterial regulatory protein, Fis family 398 437 5.0E-12 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CVS42_RS13515 eeed1f0cba9a9092b3d2942522b62e16 447 Gene3D G3DSA:3.40.50.300 136 300 2.5E-27 T 29-03-2018 CVS42_RS13515 eeed1f0cba9a9092b3d2942522b62e16 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CVS42_RS13515 eeed1f0cba9a9092b3d2942522b62e16 447 Gene3D G3DSA:3.40.50.2300 1 135 6.8E-36 T 29-03-2018 CVS42_RS13515 eeed1f0cba9a9092b3d2942522b62e16 447 SUPERFAMILY SSF52172 1 174 2.85E-44 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS13515 eeed1f0cba9a9092b3d2942522b62e16 447 SMART SM00382 149 293 1.8E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS13515 eeed1f0cba9a9092b3d2942522b62e16 447 Gene3D G3DSA:1.10.8.60 302 372 4.8E-24 T 29-03-2018 CVS42_RS13515 eeed1f0cba9a9092b3d2942522b62e16 447 SUPERFAMILY SSF46689 342 437 3.72E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS13515 eeed1f0cba9a9092b3d2942522b62e16 447 Pfam PF00158 Sigma-54 interaction domain 133 295 1.4E-66 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CVS42_RS13515 eeed1f0cba9a9092b3d2942522b62e16 447 Gene3D G3DSA:1.10.10.60 373 444 1.8E-11 T 29-03-2018 CVS42_RS13350 86f4174f8090c862fda5353e08528ce1 316 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 272 2.3E-101 T 29-03-2018 IPR019991 GTP-binding protein, ribosome biogenesis CVS42_RS13350 86f4174f8090c862fda5353e08528ce1 316 Gene3D G3DSA:1.10.1580.10 176 266 5.4E-21 T 29-03-2018 IPR023179 GTP-binding protein, orthogonal bundle domain CVS42_RS13350 86f4174f8090c862fda5353e08528ce1 316 PIRSF PIRSF006230 1 277 4.9E-96 T 29-03-2018 IPR016478 GTPase, MTG1 CVS42_RS13350 86f4174f8090c862fda5353e08528ce1 316 PIRSF PIRSF006230 281 315 1500.0 T 29-03-2018 IPR016478 GTPase, MTG1 CVS42_RS13350 86f4174f8090c862fda5353e08528ce1 316 Pfam PF01926 50S ribosome-binding GTPase 117 206 1.5E-15 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS13350 86f4174f8090c862fda5353e08528ce1 316 Gene3D G3DSA:3.40.50.300 12 173 1.5E-26 T 29-03-2018 CVS42_RS13350 86f4174f8090c862fda5353e08528ce1 316 SUPERFAMILY SSF52540 9 254 1.54E-38 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS01575 19520098f4185fb8314cde642c35f840 69 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 36 60 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CVS42_RS01575 19520098f4185fb8314cde642c35f840 69 SUPERFAMILY SSF57716 35 67 2.85E-7 T 29-03-2018 CVS42_RS01575 19520098f4185fb8314cde642c35f840 69 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 66 1.8E-11 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CVS42_RS01575 19520098f4185fb8314cde642c35f840 69 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 2 65 8.6E-19 T 29-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type CVS42_RS21325 29d8f8bc1389922206eaad20b13a8fb0 129 SMART SM00422 1 70 1.4E-31 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS21325 29d8f8bc1389922206eaad20b13a8fb0 129 Pfam PF09278 MerR, DNA binding 44 108 6.0E-18 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding CVS42_RS21325 29d8f8bc1389922206eaad20b13a8fb0 129 Gene3D G3DSA:1.10.1660.10 58 129 1.3E-18 T 29-03-2018 CVS42_RS21325 29d8f8bc1389922206eaad20b13a8fb0 129 Pfam PF00376 MerR family regulatory protein 2 39 7.4E-17 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS21325 29d8f8bc1389922206eaad20b13a8fb0 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.8E-10 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS21325 29d8f8bc1389922206eaad20b13a8fb0 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.8E-10 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS21325 29d8f8bc1389922206eaad20b13a8fb0 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.8E-10 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS21325 29d8f8bc1389922206eaad20b13a8fb0 129 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS21325 29d8f8bc1389922206eaad20b13a8fb0 129 Gene3D G3DSA:1.10.1660.10 1 57 2.2E-23 T 29-03-2018 CVS42_RS21325 29d8f8bc1389922206eaad20b13a8fb0 129 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 7.2E-51 T 29-03-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 CVS42_RS21325 29d8f8bc1389922206eaad20b13a8fb0 129 SUPERFAMILY SSF46955 1 126 3.02E-38 T 29-03-2018 IPR009061 Putative DNA-binding domain CVS42_RS18555 d024a983371b78cc6b2b28331ba84c31 747 SUPERFAMILY SSF160246 489 627 1.02E-23 T 29-03-2018 CVS42_RS18555 d024a983371b78cc6b2b28331ba84c31 747 Gene3D G3DSA:3.90.550.10 38 374 4.3E-11 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS18555 d024a983371b78cc6b2b28331ba84c31 747 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 526 629 1.3E-12 T 29-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 CVS42_RS18555 d024a983371b78cc6b2b28331ba84c31 747 Pfam PF13632 Glycosyl transferase family group 2 167 385 3.8E-42 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CVS42_RS18555 d024a983371b78cc6b2b28331ba84c31 747 SUPERFAMILY SSF53448 326 408 1.97E-15 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS18555 d024a983371b78cc6b2b28331ba84c31 747 SUPERFAMILY SSF53448 73 298 1.97E-15 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS02900 3c79c3bacd82aaef69b30c76b9dbafa9 239 SUPERFAMILY SSF53850 21 227 9.87E-27 T 29-03-2018 CVS42_RS02900 3c79c3bacd82aaef69b30c76b9dbafa9 239 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 211 4.9E-13 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS02900 3c79c3bacd82aaef69b30c76b9dbafa9 239 Gene3D G3DSA:3.40.190.10 12 113 6.6E-7 T 29-03-2018 CVS42_RS02900 3c79c3bacd82aaef69b30c76b9dbafa9 239 Gene3D G3DSA:3.40.190.10 114 197 2.3E-5 T 29-03-2018 CVS42_RS09225 6f5072377facee2e9554959a366c5760 167 Hamap MF_00163 Peptide deformylase [def]. 2 162 28.656 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS09225 6f5072377facee2e9554959a366c5760 167 Pfam PF01327 Polypeptide deformylase 4 152 5.6E-45 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS09225 6f5072377facee2e9554959a366c5760 167 PRINTS PR01576 Peptide deformylase signature 120 149 1.3E-30 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS09225 6f5072377facee2e9554959a366c5760 167 PRINTS PR01576 Peptide deformylase signature 89 100 1.3E-30 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS09225 6f5072377facee2e9554959a366c5760 167 PRINTS PR01576 Peptide deformylase signature 33 62 1.3E-30 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS09225 6f5072377facee2e9554959a366c5760 167 PRINTS PR01576 Peptide deformylase signature 101 119 1.3E-30 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS09225 6f5072377facee2e9554959a366c5760 167 SUPERFAMILY SSF56420 2 162 1.83E-54 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS09225 6f5072377facee2e9554959a366c5760 167 PIRSF PIRSF004749 1 167 2.3E-49 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS09225 6f5072377facee2e9554959a366c5760 167 Gene3D G3DSA:3.90.45.10 2 167 2.3E-50 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS09225 6f5072377facee2e9554959a366c5760 167 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.4E-48 T 29-03-2018 IPR023635 Peptide deformylase CVS42_RS00685 bb05c013dc5dd44cf7247abb078efe47 352 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 149 166 - T 29-03-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CVS42_RS00685 bb05c013dc5dd44cf7247abb078efe47 352 Gene3D G3DSA:3.30.428.10 44 162 2.1E-47 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CVS42_RS00685 bb05c013dc5dd44cf7247abb078efe47 352 PIRSF PIRSF000808 1 339 5.1E-120 T 29-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CVS42_RS00685 bb05c013dc5dd44cf7247abb078efe47 352 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 2 344 1.4E-180 T 29-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CVS42_RS00685 bb05c013dc5dd44cf7247abb078efe47 352 Gene3D G3DSA:3.30.428.10 163 344 7.3E-55 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CVS42_RS00685 bb05c013dc5dd44cf7247abb078efe47 352 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 3 174 3.7E-67 T 29-03-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CVS42_RS00685 bb05c013dc5dd44cf7247abb078efe47 352 SUPERFAMILY SSF54197 177 343 1.13E-52 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CVS42_RS00685 bb05c013dc5dd44cf7247abb078efe47 352 SUPERFAMILY SSF54197 2 175 2.27E-69 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CVS42_RS00685 bb05c013dc5dd44cf7247abb078efe47 352 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 181 344 1.7E-65 T 29-03-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CVS42_RS00860 d04fbc6db6ebf6b56c8fe2f936d1b3a2 224 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 202 9.1E-59 T 29-03-2018 IPR003744 Queuosine precursor transporter CVS42_RS00860 d04fbc6db6ebf6b56c8fe2f936d1b3a2 224 Pfam PF02592 Putative vitamin uptake transporter 42 198 1.5E-35 T 29-03-2018 IPR003744 Queuosine precursor transporter CVS42_RS06975 5a0869270d32433fe1c8e5f02468cfd6 250 SMART SM00892 44 236 4.0E-62 T 29-03-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 CVS42_RS06975 5a0869270d32433fe1c8e5f02468cfd6 250 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 104 112 - T 29-03-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 CVS42_RS06975 5a0869270d32433fe1c8e5f02468cfd6 250 Gene3D G3DSA:3.40.570.10 22 246 3.1E-67 T 29-03-2018 CVS42_RS06975 5a0869270d32433fe1c8e5f02468cfd6 250 Pfam PF01223 DNA/RNA non-specific endonuclease 29 235 6.5E-51 T 29-03-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 CVS42_RS06975 5a0869270d32433fe1c8e5f02468cfd6 250 SUPERFAMILY SSF54060 33 244 6.47E-64 T 29-03-2018 CVS42_RS06975 5a0869270d32433fe1c8e5f02468cfd6 250 SMART SM00477 45 236 1.1E-47 T 29-03-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 CVS42_RS20525 6ceb7c2308735ad1d83183ae25137a5c 517 SUPERFAMILY SSF103473 3 194 9.55E-61 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS20525 6ceb7c2308735ad1d83183ae25137a5c 517 SUPERFAMILY SSF103473 248 419 9.55E-61 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS20525 6ceb7c2308735ad1d83183ae25137a5c 517 SUPERFAMILY SSF103473 479 513 9.55E-61 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS20525 6ceb7c2308735ad1d83183ae25137a5c 517 Gene3D G3DSA:1.20.1250.20 5 188 2.0E-25 T 29-03-2018 CVS42_RS20525 6ceb7c2308735ad1d83183ae25137a5c 517 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 499 5.4E-126 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CVS42_RS20525 6ceb7c2308735ad1d83183ae25137a5c 517 Gene3D G3DSA:1.20.1250.20 252 516 1.7E-27 T 29-03-2018 CVS42_RS20525 6ceb7c2308735ad1d83183ae25137a5c 517 Pfam PF07690 Major Facilitator Superfamily 16 409 3.2E-43 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS00315 90ca6ebee4c8c8de75a512a8a7c2797a 145 Gene3D G3DSA:3.40.50.620 6 145 1.0E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS00315 90ca6ebee4c8c8de75a512a8a7c2797a 145 PIRSF PIRSF006276 1 145 2.1E-52 T 29-03-2018 IPR006015 Universal stress protein A CVS42_RS00315 90ca6ebee4c8c8de75a512a8a7c2797a 145 Pfam PF00582 Universal stress protein family 7 142 1.8E-20 T 29-03-2018 IPR006016 UspA GO:0006950 CVS42_RS00315 90ca6ebee4c8c8de75a512a8a7c2797a 145 SUPERFAMILY SSF52402 7 142 7.87E-32 T 29-03-2018 CVS42_RS14590 3a843893bdb9c539dc8813998c9efa01 193 SUPERFAMILY SSF53146 19 128 7.72E-17 T 29-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CVS42_RS14590 3a843893bdb9c539dc8813998c9efa01 193 Gene3D G3DSA:3.30.420.130 7 193 1.8E-15 T 29-03-2018 CVS42_RS14590 3a843893bdb9c539dc8813998c9efa01 193 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 22 97 5.2E-11 T 29-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CVS42_RS03125 6da831d8b2c88c41aa0d70fd863383eb 133 SUPERFAMILY SSF54593 6 130 3.09E-32 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS03125 6da831d8b2c88c41aa0d70fd863383eb 133 Gene3D G3DSA:3.10.180.10 8 131 1.7E-28 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS03125 6da831d8b2c88c41aa0d70fd863383eb 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 1.3E-19 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CVS42_RS08660 83680e6a766ac129af4221fd4dfbfe91 279 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 14 267 3.0E-106 T 29-03-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 CVS42_RS08660 83680e6a766ac129af4221fd4dfbfe91 279 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 213 1.1E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS08660 83680e6a766ac129af4221fd4dfbfe91 279 Gene3D G3DSA:3.40.50.1000 107 274 5.1E-20 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS08660 83680e6a766ac129af4221fd4dfbfe91 279 SUPERFAMILY SSF56784 14 269 4.85E-52 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS08660 83680e6a766ac129af4221fd4dfbfe91 279 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 279 135.14 T 29-03-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 CVS42_RS08660 83680e6a766ac129af4221fd4dfbfe91 279 Gene3D G3DSA:1.10.150.240 32 106 5.4E-29 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CVS42_RS18830 a4ee24bcbf344a8346388b19acd43546 104 Hamap MF_00910 Cell division protein FtsL [ftsL]. 18 101 14.29 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CVS42_RS18830 a4ee24bcbf344a8346388b19acd43546 104 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 20 92 2.1E-18 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CVS42_RS18830 a4ee24bcbf344a8346388b19acd43546 104 Pfam PF04999 Cell division protein FtsL 8 102 5.0E-29 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CVS42_RS05930 e1225e4a45957222c08b4b2f5488f7ff 208 Pfam PF06578 YOP proteins translocation protein K (YscK) 5 208 4.8E-67 T 29-03-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 CVS42_RS05930 e1225e4a45957222c08b4b2f5488f7ff 208 ProDom PD023059 PLASMID TYPE PROTEINS YOP III YSCK VIRULENCE K TRANSLOCATION PSCK 5 207 5.0E-74 T 29-03-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 CVS42_RS17475 d4ef43d01c388b7fb4f95ac7f6f0cce9 449 Pfam PF02321 Outer membrane efflux protein 14 226 5.2E-22 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CVS42_RS17475 d4ef43d01c388b7fb4f95ac7f6f0cce9 449 Pfam PF02321 Outer membrane efflux protein 247 431 3.3E-23 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CVS42_RS17475 d4ef43d01c388b7fb4f95ac7f6f0cce9 449 SUPERFAMILY SSF56954 11 64 1.7E-67 T 29-03-2018 CVS42_RS17475 d4ef43d01c388b7fb4f95ac7f6f0cce9 449 SUPERFAMILY SSF56954 96 438 1.7E-67 T 29-03-2018 CVS42_RS17475 d4ef43d01c388b7fb4f95ac7f6f0cce9 449 Gene3D G3DSA:1.20.1600.10 4 440 3.5E-61 T 29-03-2018 CVS42_RS16210 057513013b774e01fe9098bc9fd5ac78 351 SUPERFAMILY SSF56672 1 234 6.23E-88 T 29-03-2018 CVS42_RS16210 057513013b774e01fe9098bc9fd5ac78 351 Pfam PF11798 IMS family HHH motif 166 194 2.7E-6 T 29-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CVS42_RS16210 057513013b774e01fe9098bc9fd5ac78 351 Gene3D G3DSA:3.30.70.270 41 112 6.6E-24 T 29-03-2018 CVS42_RS16210 057513013b774e01fe9098bc9fd5ac78 351 Gene3D G3DSA:3.30.70.270 113 170 9.6E-20 T 29-03-2018 CVS42_RS16210 057513013b774e01fe9098bc9fd5ac78 351 SUPERFAMILY SSF100879 241 349 2.35E-19 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CVS42_RS16210 057513013b774e01fe9098bc9fd5ac78 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 348 35.874 T 29-03-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CVS42_RS16210 057513013b774e01fe9098bc9fd5ac78 351 Pfam PF00817 impB/mucB/samB family 7 154 1.5E-48 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CVS42_RS16210 057513013b774e01fe9098bc9fd5ac78 351 Gene3D G3DSA:3.30.1490.100 243 350 7.0E-17 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CVS42_RS16210 057513013b774e01fe9098bc9fd5ac78 351 Gene3D G3DSA:1.10.150.20 171 242 5.1E-21 T 29-03-2018 CVS42_RS12145 4e8e1ac1a4cdcf3c2fede20a15a11abd 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 419 441 1.2E-9 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CVS42_RS12145 4e8e1ac1a4cdcf3c2fede20a15a11abd 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 86 106 1.2E-9 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CVS42_RS12145 4e8e1ac1a4cdcf3c2fede20a15a11abd 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 60 84 1.2E-9 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CVS42_RS12145 4e8e1ac1a4cdcf3c2fede20a15a11abd 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 267 289 1.2E-9 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CVS42_RS12145 4e8e1ac1a4cdcf3c2fede20a15a11abd 615 Pfam PF00361 Proton-conducting membrane transporter 135 427 6.0E-91 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12145 4e8e1ac1a4cdcf3c2fede20a15a11abd 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 1.3E-53 T 29-03-2018 CVS42_RS12145 4e8e1ac1a4cdcf3c2fede20a15a11abd 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 249 275 1.3E-53 T 29-03-2018 CVS42_RS12145 4e8e1ac1a4cdcf3c2fede20a15a11abd 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 227 248 1.3E-53 T 29-03-2018 CVS42_RS12145 4e8e1ac1a4cdcf3c2fede20a15a11abd 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 420 439 1.3E-53 T 29-03-2018 CVS42_RS12145 4e8e1ac1a4cdcf3c2fede20a15a11abd 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 1.3E-53 T 29-03-2018 CVS42_RS12145 4e8e1ac1a4cdcf3c2fede20a15a11abd 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 159 180 1.3E-53 T 29-03-2018 CVS42_RS12145 4e8e1ac1a4cdcf3c2fede20a15a11abd 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 317 329 1.3E-53 T 29-03-2018 CVS42_RS12145 4e8e1ac1a4cdcf3c2fede20a15a11abd 615 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 3 612 1.6E-224 T 29-03-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12145 4e8e1ac1a4cdcf3c2fede20a15a11abd 615 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 123 5.3E-21 T 29-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS16715 405964700c21b2113d17e3bb9c4cd0df 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 1.1E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS16715 405964700c21b2113d17e3bb9c4cd0df 324 SUPERFAMILY SSF161098 90 303 1.68E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS16715 405964700c21b2113d17e3bb9c4cd0df 324 Gene3D G3DSA:1.10.3720.10 3 308 4.3E-36 T 29-03-2018 CVS42_RS01920 7f91161395803e4cc716c2c761917116 172 SUPERFAMILY SSF52799 11 168 8.43E-31 T 29-03-2018 IPR029021 Protein-tyrosine phosphatase-like CVS42_RS01920 7f91161395803e4cc716c2c761917116 172 Pfam PF00782 Dual specificity phosphatase, catalytic domain 69 160 2.0E-8 T 29-03-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 CVS42_RS01920 7f91161395803e4cc716c2c761917116 172 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 113 123 - T 29-03-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 CVS42_RS01920 7f91161395803e4cc716c2c761917116 172 Gene3D G3DSA:3.90.190.10 11 172 3.5E-18 T 29-03-2018 IPR029021 Protein-tyrosine phosphatase-like CVS42_RS02070 6e31546334fff5f7c37275618c22aedb 440 Gene3D G3DSA:3.60.120.10 2 440 4.8E-95 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CVS42_RS02070 6e31546334fff5f7c37275618c22aedb 440 Hamap MF_01935 Isochorismate synthase MenF [menF]. 2 440 29.649 T 29-03-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CVS42_RS02070 6e31546334fff5f7c37275618c22aedb 440 SUPERFAMILY SSF56322 18 440 7.85E-93 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CVS42_RS02070 6e31546334fff5f7c37275618c22aedb 440 Pfam PF00425 chorismate binding enzyme 177 431 2.9E-64 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CVS42_RS02070 6e31546334fff5f7c37275618c22aedb 440 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 90 438 3.4E-100 T 29-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CVS42_RS12010 a4942698f266abf9a94de8bc70911c5e 301 Gene3D G3DSA:1.10.3720.10 20 300 4.7E-45 T 29-03-2018 CVS42_RS12010 a4942698f266abf9a94de8bc70911c5e 301 SUPERFAMILY SSF161098 69 138 6.15E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS12010 a4942698f266abf9a94de8bc70911c5e 301 SUPERFAMILY SSF161098 165 284 6.15E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS12010 a4942698f266abf9a94de8bc70911c5e 301 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 68 136 7.9E-15 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CVS42_RS12010 a4942698f266abf9a94de8bc70911c5e 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 295 4.5E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS14700 97e02363944d2cf1dfe9a11e577f53fc 204 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 5.6E-14 T 29-03-2018 CVS42_RS14700 97e02363944d2cf1dfe9a11e577f53fc 204 PRINTS PR00096 Glutamine amidotransferase superfamily signature 167 180 5.6E-14 T 29-03-2018 CVS42_RS14700 97e02363944d2cf1dfe9a11e577f53fc 204 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 5.6E-14 T 29-03-2018 CVS42_RS14700 97e02363944d2cf1dfe9a11e577f53fc 204 PRINTS PR00097 Anthranilate synthase component II signature 167 180 4.0E-35 T 29-03-2018 CVS42_RS14700 97e02363944d2cf1dfe9a11e577f53fc 204 PRINTS PR00097 Anthranilate synthase component II signature 105 113 4.0E-35 T 29-03-2018 CVS42_RS14700 97e02363944d2cf1dfe9a11e577f53fc 204 PRINTS PR00097 Anthranilate synthase component II signature 125 137 4.0E-35 T 29-03-2018 CVS42_RS14700 97e02363944d2cf1dfe9a11e577f53fc 204 PRINTS PR00097 Anthranilate synthase component II signature 4 18 4.0E-35 T 29-03-2018 CVS42_RS14700 97e02363944d2cf1dfe9a11e577f53fc 204 PRINTS PR00097 Anthranilate synthase component II signature 53 62 4.0E-35 T 29-03-2018 CVS42_RS14700 97e02363944d2cf1dfe9a11e577f53fc 204 PRINTS PR00097 Anthranilate synthase component II signature 80 91 4.0E-35 T 29-03-2018 CVS42_RS14700 97e02363944d2cf1dfe9a11e577f53fc 204 SUPERFAMILY SSF52317 3 189 2.75E-47 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS14700 97e02363944d2cf1dfe9a11e577f53fc 204 Gene3D G3DSA:3.40.50.880 1 194 1.0E-49 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS14700 97e02363944d2cf1dfe9a11e577f53fc 204 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 187 4.6E-52 T 29-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CVS42_RS14700 97e02363944d2cf1dfe9a11e577f53fc 204 Pfam PF00117 Glutamine amidotransferase class-I 6 188 8.6E-44 T 29-03-2018 IPR017926 Glutamine amidotransferase CVS42_RS14700 97e02363944d2cf1dfe9a11e577f53fc 204 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 1.7E-5 T 29-03-2018 CVS42_RS14700 97e02363944d2cf1dfe9a11e577f53fc 204 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 1.7E-5 T 29-03-2018 CVS42_RS05240 a4e206527774ad1b9d2e598139046566 250 Pfam PF09836 Putative DNA-binding domain 6 96 2.3E-18 T 29-03-2018 IPR018640 Putative DNA-binding domain, bacteria CVS42_RS08280 f79cb5a69d345600ecc3572c70ff5a7f 261 SUPERFAMILY SSF52540 6 251 2.88E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS08280 f79cb5a69d345600ecc3572c70ff5a7f 261 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS08280 f79cb5a69d345600ecc3572c70ff5a7f 261 Pfam PF00005 ABC transporter 32 179 6.3E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS08280 f79cb5a69d345600ecc3572c70ff5a7f 261 Gene3D G3DSA:3.40.50.300 4 261 4.2E-61 T 29-03-2018 CVS42_RS08280 f79cb5a69d345600ecc3572c70ff5a7f 261 SMART SM00382 40 229 1.6E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS05935 538ab5448b5007905f34b0784fc4ea23 221 Pfam PF02108 Flagellar assembly protein FliH 71 194 1.5E-19 T 29-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CVS42_RS05935 538ab5448b5007905f34b0784fc4ea23 221 Gene3D G3DSA:1.20.5.620 29 98 0.0015 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain CVS42_RS05935 538ab5448b5007905f34b0784fc4ea23 221 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 187 4.7E-45 T 29-03-2018 IPR012842 Type III secretion system HrpE/YscL CVS42_RS05935 538ab5448b5007905f34b0784fc4ea23 221 SUPERFAMILY SSF160527 96 202 2.09E-6 T 29-03-2018 CVS42_RS06450 763d06e0a9ee1199a90b7e2ec1cbb4cc 347 Pfam PF06406 StbA protein 5 324 4.4E-102 T 29-03-2018 IPR009440 Plasmid segregation protein ParM/StbA CVS42_RS06450 763d06e0a9ee1199a90b7e2ec1cbb4cc 347 Gene3D G3DSA:3.30.420.40 5 176 8.2E-30 T 29-03-2018 CVS42_RS06450 763d06e0a9ee1199a90b7e2ec1cbb4cc 347 SUPERFAMILY SSF53067 169 327 1.3E-21 T 29-03-2018 CVS42_RS06450 763d06e0a9ee1199a90b7e2ec1cbb4cc 347 Gene3D G3DSA:3.30.420.40 177 311 2.9E-11 T 29-03-2018 CVS42_RS06450 763d06e0a9ee1199a90b7e2ec1cbb4cc 347 SUPERFAMILY SSF53067 5 162 2.01E-47 T 29-03-2018 CVS42_RS08740 407c13a2661c6be9d5ac0883f284f7e0 403 Gene3D G3DSA:3.30.420.40 220 370 2.1E-33 T 29-03-2018 CVS42_RS08740 407c13a2661c6be9d5ac0883f284f7e0 403 SUPERFAMILY SSF53067 85 374 4.59E-41 T 29-03-2018 CVS42_RS08740 407c13a2661c6be9d5ac0883f284f7e0 403 Pfam PF00480 ROK family 87 357 4.2E-42 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CVS42_RS08740 407c13a2661c6be9d5ac0883f284f7e0 403 SUPERFAMILY SSF46785 11 75 7.63E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08740 407c13a2661c6be9d5ac0883f284f7e0 403 Gene3D G3DSA:1.10.10.10 19 79 1.3E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08740 407c13a2661c6be9d5ac0883f284f7e0 403 Gene3D G3DSA:3.30.420.40 82 219 3.1E-19 T 29-03-2018 CVS42_RS21340 dd30bd1f6827bdb7c5a372c1954ffec7 238 Hamap MF_00564 Ribonuclease PH [rph]. 2 238 48.175 T 29-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CVS42_RS21340 dd30bd1f6827bdb7c5a372c1954ffec7 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 223 6.5E-12 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CVS42_RS21340 dd30bd1f6827bdb7c5a372c1954ffec7 238 Pfam PF01138 3' exoribonuclease family, domain 1 11 141 9.0E-25 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CVS42_RS21340 dd30bd1f6827bdb7c5a372c1954ffec7 238 ProSitePatterns PS01277 Ribonuclease PH signature. 117 129 - T 29-03-2018 IPR018336 Ribonuclease PH, conserved site CVS42_RS21340 dd30bd1f6827bdb7c5a372c1954ffec7 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 3 237 3.2E-114 T 29-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CVS42_RS21340 dd30bd1f6827bdb7c5a372c1954ffec7 238 SUPERFAMILY SSF55666 154 237 8.9E-26 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CVS42_RS21340 dd30bd1f6827bdb7c5a372c1954ffec7 238 SUPERFAMILY SSF54211 3 182 2.08E-45 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS21340 dd30bd1f6827bdb7c5a372c1954ffec7 238 Gene3D G3DSA:3.30.230.70 2 238 3.0E-58 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CVS42_RS17670 78d8510a1f65529137c4a3bcced78cfb 439 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 438 2.8E-173 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CVS42_RS17670 78d8510a1f65529137c4a3bcced78cfb 439 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 371 2.1E-144 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CVS42_RS17670 78d8510a1f65529137c4a3bcced78cfb 439 PIRSF PIRSF004539 1 439 2.3E-165 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CVS42_RS18640 9f9e0bf6ebaa31b73502b0861c1ebe67 270 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 217 231 - T 29-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CVS42_RS18640 9f9e0bf6ebaa31b73502b0861c1ebe67 270 SUPERFAMILY SSF56655 11 267 1.7E-72 T 29-03-2018 CVS42_RS18640 9f9e0bf6ebaa31b73502b0861c1ebe67 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 214 238 6.3E-11 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS18640 9f9e0bf6ebaa31b73502b0861c1ebe67 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 182 203 6.3E-11 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS18640 9f9e0bf6ebaa31b73502b0861c1ebe67 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 6.3E-11 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS18640 9f9e0bf6ebaa31b73502b0861c1ebe67 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 6.3E-11 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS18640 9f9e0bf6ebaa31b73502b0861c1ebe67 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 6.3E-11 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS18640 9f9e0bf6ebaa31b73502b0861c1ebe67 270 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 9 257 1.2E-88 T 29-03-2018 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 CVS42_RS18640 9f9e0bf6ebaa31b73502b0861c1ebe67 270 Gene3D G3DSA:3.40.190.80 161 268 4.4E-30 T 29-03-2018 CVS42_RS18640 9f9e0bf6ebaa31b73502b0861c1ebe67 270 Gene3D G3DSA:3.30.540.10 3 160 1.5E-37 T 29-03-2018 CVS42_RS18640 9f9e0bf6ebaa31b73502b0861c1ebe67 270 Pfam PF00459 Inositol monophosphatase family 13 248 1.9E-51 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS03925 68d0b283a7d188172b3a8a9775f8edaf 362 Pfam PF00267 Gram-negative porin 29 362 1.1E-55 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CVS42_RS03925 68d0b283a7d188172b3a8a9775f8edaf 362 Gene3D G3DSA:2.40.160.10 10 362 1.9E-44 T 29-03-2018 CVS42_RS03925 68d0b283a7d188172b3a8a9775f8edaf 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 91 113 6.3E-14 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CVS42_RS03925 68d0b283a7d188172b3a8a9775f8edaf 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 6.3E-14 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CVS42_RS03925 68d0b283a7d188172b3a8a9775f8edaf 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 239 256 6.3E-14 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CVS42_RS03925 68d0b283a7d188172b3a8a9775f8edaf 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 270 289 6.3E-14 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CVS42_RS03925 68d0b283a7d188172b3a8a9775f8edaf 362 SUPERFAMILY SSF56935 22 362 4.27E-61 T 29-03-2018 CVS42_RS07150 8bc71fcfa52eae361ac467d711ab3865 320 SMART SM01126 140 292 4.5E-45 T 29-03-2018 IPR024445 ISXO2-like transposase domain CVS42_RS07150 8bc71fcfa52eae361ac467d711ab3865 320 Gene3D G3DSA:1.10.10.10 6 151 1.4E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS07150 8bc71fcfa52eae361ac467d711ab3865 320 Pfam PF12762 ISXO2-like transposase domain 142 287 1.5E-14 T 29-03-2018 IPR024445 ISXO2-like transposase domain CVS42_RS07150 8bc71fcfa52eae361ac467d711ab3865 320 Pfam PF13384 Homeodomain-like domain 100 130 1.5E-6 T 29-03-2018 CVS42_RS04150 d37eac01504dfeb72639b225900c5d7c 69 SMART SM00530 6 62 8.9E-7 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS04150 d37eac01504dfeb72639b225900c5d7c 69 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 4.9E-22 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS04150 d37eac01504dfeb72639b225900c5d7c 69 SUPERFAMILY SSF47413 1 67 9.85E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS04150 d37eac01504dfeb72639b225900c5d7c 69 Gene3D G3DSA:1.10.260.40 2 69 1.3E-12 T 29-03-2018 CVS42_RS03240 c2dc369fdd9836e792595d2543ba3079 233 Gene3D G3DSA:1.20.144.10 10 225 1.5E-13 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CVS42_RS03240 c2dc369fdd9836e792595d2543ba3079 233 Pfam PF01569 PAP2 superfamily 87 203 9.0E-11 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CVS42_RS03240 c2dc369fdd9836e792595d2543ba3079 233 SMART SM00014 85 205 3.4E-11 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CVS42_RS03240 c2dc369fdd9836e792595d2543ba3079 233 SUPERFAMILY SSF48317 15 213 3.14E-18 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CVS42_RS02000 a308a80bce297caa8abfa890c7799fe9 68 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 2.1E-13 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CVS42_RS21235 3be9b0b9767596b87731c7636e59c94b 506 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 6 504 5.5E-238 T 29-03-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CVS42_RS21235 3be9b0b9767596b87731c7636e59c94b 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 419 504 8.8E-23 T 29-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CVS42_RS21235 3be9b0b9767596b87731c7636e59c94b 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 320 410 6.3E-23 T 29-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CVS42_RS21235 3be9b0b9767596b87731c7636e59c94b 506 Gene3D G3DSA:3.40.50.1100 161 324 3.2E-38 T 29-03-2018 CVS42_RS21235 3be9b0b9767596b87731c7636e59c94b 506 SUPERFAMILY SSF55021 411 504 2.15E-25 T 29-03-2018 CVS42_RS21235 3be9b0b9767596b87731c7636e59c94b 506 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 307 2.8E-84 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CVS42_RS21235 3be9b0b9767596b87731c7636e59c94b 506 Gene3D G3DSA:3.40.1020.10 329 505 6.9E-69 T 29-03-2018 CVS42_RS21235 3be9b0b9767596b87731c7636e59c94b 506 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 44 57 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CVS42_RS21235 3be9b0b9767596b87731c7636e59c94b 506 SUPERFAMILY SSF53686 16 355 1.83E-103 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CVS42_RS21235 3be9b0b9767596b87731c7636e59c94b 506 Gene3D G3DSA:3.40.50.1100 14 160 3.4E-42 T 29-03-2018 CVS42_RS18040 84822437e63de136fd156ad396ed6b2e 257 PIRSF PIRSF005902 1 257 2.3E-66 T 29-03-2018 IPR001130 TatD family GO:0016788 CVS42_RS18040 84822437e63de136fd156ad396ed6b2e 257 SUPERFAMILY SSF51556 3 254 1.22E-75 T 29-03-2018 IPR032466 Metal-dependent hydrolase CVS42_RS18040 84822437e63de136fd156ad396ed6b2e 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CVS42_RS18040 84822437e63de136fd156ad396ed6b2e 257 Pfam PF01026 TatD related DNase 4 254 6.4E-64 T 29-03-2018 IPR001130 TatD family GO:0016788 CVS42_RS18040 84822437e63de136fd156ad396ed6b2e 257 Gene3D G3DSA:3.20.20.140 1 257 4.1E-76 T 29-03-2018 CVS42_RS03735 ce8afe99414320e73da85bb4c041d892 293 SUPERFAMILY SSF46785 4 87 5.44E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS03735 ce8afe99414320e73da85bb4c041d892 293 Pfam PF03466 LysR substrate binding domain 89 290 2.5E-25 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS03735 ce8afe99414320e73da85bb4c041d892 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS03735 ce8afe99414320e73da85bb4c041d892 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS03735 ce8afe99414320e73da85bb4c041d892 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS03735 ce8afe99414320e73da85bb4c041d892 293 Gene3D G3DSA:1.10.10.10 2 85 4.2E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS03735 ce8afe99414320e73da85bb4c041d892 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.1E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS03735 ce8afe99414320e73da85bb4c041d892 293 Gene3D G3DSA:3.40.190.10 90 180 7.9E-17 T 29-03-2018 CVS42_RS03735 ce8afe99414320e73da85bb4c041d892 293 SUPERFAMILY SSF53850 91 292 2.17E-31 T 29-03-2018 CVS42_RS03735 ce8afe99414320e73da85bb4c041d892 293 Gene3D G3DSA:3.40.190.10 181 261 8.2E-8 T 29-03-2018 CVS42_RS17480 af68947b7a6dba8dabb14c37b5263184 321 Gene3D G3DSA:1.10.1200.80 252 321 7.1E-19 T 29-03-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CVS42_RS17480 af68947b7a6dba8dabb14c37b5263184 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 317 1.7E-125 T 29-03-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CVS42_RS17480 af68947b7a6dba8dabb14c37b5263184 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.279 T 29-03-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 CVS42_RS17480 af68947b7a6dba8dabb14c37b5263184 321 Pfam PF01207 Dihydrouridine synthase (Dus) 13 314 3.2E-105 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CVS42_RS17480 af68947b7a6dba8dabb14c37b5263184 321 PIRSF PIRSF006621 1 320 2.4E-103 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CVS42_RS17480 af68947b7a6dba8dabb14c37b5263184 321 SUPERFAMILY SSF51395 11 318 4.76E-89 T 29-03-2018 CVS42_RS17480 af68947b7a6dba8dabb14c37b5263184 321 Gene3D G3DSA:3.20.20.70 6 248 4.2E-57 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS17480 af68947b7a6dba8dabb14c37b5263184 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CVS42_RS14475 04c4881403ac3395ec6133dc05b9be27 609 Pfam PF00263 Bacterial type II and III secretion system protein 423 583 5.0E-48 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 CVS42_RS14475 04c4881403ac3395ec6133dc05b9be27 609 PRINTS PR00811 Bacterial general secretion pathway protein D signature 548 566 1.5E-17 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS14475 04c4881403ac3395ec6133dc05b9be27 609 PRINTS PR00811 Bacterial general secretion pathway protein D signature 416 440 1.5E-17 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS14475 04c4881403ac3395ec6133dc05b9be27 609 PRINTS PR00811 Bacterial general secretion pathway protein D signature 362 372 1.5E-17 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS14475 04c4881403ac3395ec6133dc05b9be27 609 PRINTS PR00811 Bacterial general secretion pathway protein D signature 571 585 1.5E-17 T 29-03-2018 IPR001775 GspD/PilQ family CVS42_RS14475 04c4881403ac3395ec6133dc05b9be27 609 Pfam PF03958 Bacterial type II/III secretion system short domain 245 362 8.1E-7 T 29-03-2018 IPR005644 NolW-like CVS42_RS16045 a4f525d6e73e649a0a14316cc2734f0e 258 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 243 39.494 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CVS42_RS16045 a4f525d6e73e649a0a14316cc2734f0e 258 SUPERFAMILY SSF64005 13 238 6.93E-85 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CVS42_RS16045 a4f525d6e73e649a0a14316cc2734f0e 258 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 242 1.2E-78 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CVS42_RS16045 a4f525d6e73e649a0a14316cc2734f0e 258 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 29-03-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199 CVS42_RS16045 a4f525d6e73e649a0a14316cc2734f0e 258 Gene3D G3DSA:3.40.1180.10 5 245 1.8E-89 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CVS42_RS16045 a4f525d6e73e649a0a14316cc2734f0e 258 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 15 242 5.5E-97 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CVS42_RS05315 d9b46240ca784d91b207db130083f400 285 PIRSF PIRSF015626 2 270 4.2E-90 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CVS42_RS05315 d9b46240ca784d91b207db130083f400 285 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 9 266 27.06 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CVS42_RS05315 d9b46240ca784d91b207db130083f400 285 SUPERFAMILY SSF53927 15 266 4.51E-72 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CVS42_RS05315 d9b46240ca784d91b207db130083f400 285 Gene3D G3DSA:3.10.20.10 35 91 1.0E-12 T 29-03-2018 CVS42_RS05315 d9b46240ca784d91b207db130083f400 285 Gene3D G3DSA:3.40.140.10 131 270 9.0E-49 T 29-03-2018 CVS42_RS05315 d9b46240ca784d91b207db130083f400 285 Pfam PF02634 FdhD/NarQ family 34 265 1.4E-74 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CVS42_RS08770 095eec08533d8bb2cf137591abce3db0 545 SUPERFAMILY SSF52540 1 328 1.24E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS08770 095eec08533d8bb2cf137591abce3db0 545 Gene3D G3DSA:3.40.50.300 1 339 4.2E-17 T 29-03-2018 CVS42_RS08770 095eec08533d8bb2cf137591abce3db0 545 Pfam PF11398 Protein of unknown function (DUF2813) 1 371 6.8E-139 T 29-03-2018 IPR022602 Protein of unknown function DUF2813 CVS42_RS03530 59ad248ac685167a56e24c943752fa2a 254 SUPERFAMILY SSF56281 30 253 1.96E-46 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS03530 59ad248ac685167a56e24c943752fa2a 254 Pfam PF00753 Metallo-beta-lactamase superfamily 51 190 4.3E-15 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS03530 59ad248ac685167a56e24c943752fa2a 254 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 92 111 - T 29-03-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 CVS42_RS03530 59ad248ac685167a56e24c943752fa2a 254 ProSitePatterns PS00744 Beta-lactamases class B signature 2. 184 196 - T 29-03-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 CVS42_RS03530 59ad248ac685167a56e24c943752fa2a 254 Gene3D G3DSA:3.60.15.10 25 252 3.5E-28 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS03530 59ad248ac685167a56e24c943752fa2a 254 SMART SM00849 49 231 1.1E-18 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS18490 887b4b3b43f1f665d4529ed8ae1cae5e 107 Pfam PF08850 Domain of unknown function (DUF1820) 7 99 1.7E-39 T 29-03-2018 IPR014949 Protein of unknown function DUF1820 CVS42_RS20650 16ab293ac98d70ccad7b66e3bd578dca 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.924 T 29-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CVS42_RS20650 16ab293ac98d70ccad7b66e3bd578dca 233 Gene3D G3DSA:3.40.50.790 68 149 1.7E-34 T 29-03-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CVS42_RS20650 16ab293ac98d70ccad7b66e3bd578dca 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 5.9E-50 T 29-03-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CVS42_RS20650 16ab293ac98d70ccad7b66e3bd578dca 233 SUPERFAMILY SSF56808 6 225 2.22E-81 T 29-03-2018 IPR023674 Ribosomal protein L1-like CVS42_RS20650 16ab293ac98d70ccad7b66e3bd578dca 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 29-03-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS20650 16ab293ac98d70ccad7b66e3bd578dca 233 PIRSF PIRSF002155 1 227 7.6E-78 T 29-03-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS20650 16ab293ac98d70ccad7b66e3bd578dca 233 Gene3D G3DSA:3.30.190.20 150 228 2.3E-20 T 29-03-2018 CVS42_RS20650 16ab293ac98d70ccad7b66e3bd578dca 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 3.4E-106 T 29-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CVS42_RS19125 a1d9df1d9c0c2b9c4b9014b941561a8d 126 Pfam PF06295 Protein of unknown function (DUF1043) 11 123 1.8E-28 T 29-03-2018 IPR009386 Protein of unknown function DUF1043 CVS42_RS19125 a1d9df1d9c0c2b9c4b9014b941561a8d 126 SUPERFAMILY SSF47170 31 92 2.75E-5 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CVS42_RS19125 a1d9df1d9c0c2b9c4b9014b941561a8d 126 Gene3D G3DSA:1.20.120.30 16 105 6.4E-4 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CVS42_RS19125 a1d9df1d9c0c2b9c4b9014b941561a8d 126 PIRSF PIRSF006318 1 126 4.3E-36 T 29-03-2018 IPR009386 Protein of unknown function DUF1043 CVS42_RS02160 b2256b2897d696ee1e38af81aa85c103 439 Pfam PF02321 Outer membrane efflux protein 229 416 9.3E-34 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CVS42_RS02160 b2256b2897d696ee1e38af81aa85c103 439 Pfam PF02321 Outer membrane efflux protein 24 205 1.3E-24 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CVS42_RS02160 b2256b2897d696ee1e38af81aa85c103 439 Gene3D G3DSA:1.20.1600.10 11 426 2.0E-74 T 29-03-2018 CVS42_RS02160 b2256b2897d696ee1e38af81aa85c103 439 SUPERFAMILY SSF56954 1 418 7.06E-89 T 29-03-2018 CVS42_RS02160 b2256b2897d696ee1e38af81aa85c103 439 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 19 428 1.0E-112 T 29-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CVS42_RS00085 caddd70d3a0295d7f0183c50df1eac78 256 Gene3D G3DSA:3.60.15.10 1 256 2.7E-29 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS00085 caddd70d3a0295d7f0183c50df1eac78 256 Pfam PF13483 Beta-lactamase superfamily domain 3 208 4.3E-13 T 29-03-2018 CVS42_RS00085 caddd70d3a0295d7f0183c50df1eac78 256 SUPERFAMILY SSF56281 1 242 1.7E-20 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS19495 b1399a1fa5c7c29c3d6ed2b75ffad489 92 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 82 2.0E-23 T 29-03-2018 IPR027354 YcgL domain CVS42_RS19495 b1399a1fa5c7c29c3d6ed2b75ffad489 92 Pfam PF05166 YcgL domain 3 75 2.3E-29 T 29-03-2018 IPR027354 YcgL domain CVS42_RS19495 b1399a1fa5c7c29c3d6ed2b75ffad489 92 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 26.98 T 29-03-2018 IPR027354 YcgL domain CVS42_RS19495 b1399a1fa5c7c29c3d6ed2b75ffad489 92 SUPERFAMILY SSF160191 1 89 3.4E-35 T 29-03-2018 CVS42_RS02055 e300dc2a48ffb26ecc80252cae953267 286 Pfam PF00378 Enoyl-CoA hydratase/isomerase 32 280 6.1E-79 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CVS42_RS02055 e300dc2a48ffb26ecc80252cae953267 286 Gene3D G3DSA:3.90.226.10 8 225 3.8E-63 T 29-03-2018 CVS42_RS02055 e300dc2a48ffb26ecc80252cae953267 286 TIGRFAM TIGR01929 menB: naphthoate synthase 23 282 2.9E-146 T 29-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 CVS42_RS02055 e300dc2a48ffb26ecc80252cae953267 286 SUPERFAMILY SSF52096 18 281 5.83E-79 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS02055 e300dc2a48ffb26ecc80252cae953267 286 Gene3D G3DSA:1.10.12.10 226 274 4.3E-14 T 29-03-2018 IPR014748 Crontonase, C-terminal CVS42_RS02055 e300dc2a48ffb26ecc80252cae953267 286 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 16 285 55.608 T 29-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 CVS42_RS02055 e300dc2a48ffb26ecc80252cae953267 286 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 124 144 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CVS42_RS17585 928c6dbca78167b574ff8c6cccee171c 539 SUPERFAMILY SSF161098 300 528 6.8E-30 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS17585 928c6dbca78167b574ff8c6cccee171c 539 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 258 5.6E-6 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS17585 928c6dbca78167b574ff8c6cccee171c 539 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 378 528 3.3E-11 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS17585 928c6dbca78167b574ff8c6cccee171c 539 Gene3D G3DSA:1.10.3720.10 48 268 2.6E-26 T 29-03-2018 CVS42_RS17585 928c6dbca78167b574ff8c6cccee171c 539 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 10 527 2.1E-159 T 29-03-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 CVS42_RS17585 928c6dbca78167b574ff8c6cccee171c 539 SUPERFAMILY SSF161098 11 265 1.74E-37 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS17585 928c6dbca78167b574ff8c6cccee171c 539 Gene3D G3DSA:1.10.3720.10 321 531 4.0E-26 T 29-03-2018 CVS42_RS06815 6eec1a6d817906e51c08c1a8c73c094b 502 SUPERFAMILY SSF111369 118 314 1.83E-19 T 29-03-2018 CVS42_RS06815 6eec1a6d817906e51c08c1a8c73c094b 502 Gene3D G3DSA:2.40.50.100 196 424 3.3E-7 T 29-03-2018 CVS42_RS06815 6eec1a6d817906e51c08c1a8c73c094b 502 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 99 307 8.5E-81 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CVS42_RS06815 6eec1a6d817906e51c08c1a8c73c094b 502 Pfam PF11604 Copper binding periplasmic protein CusF 405 470 1.9E-21 T 29-03-2018 IPR021647 Copper binding periplasmic protein CusF CVS42_RS06815 6eec1a6d817906e51c08c1a8c73c094b 502 Gene3D G3DSA:2.40.50.100 117 195 2.6E-5 T 29-03-2018 CVS42_RS06815 6eec1a6d817906e51c08c1a8c73c094b 502 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 174 386 4.5E-39 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CVS42_RS08430 ee4c40a767ba53fc36a3e815c71dc39a 245 SUPERFAMILY SSF52499 43 220 1.44E-40 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CVS42_RS08430 ee4c40a767ba53fc36a3e815c71dc39a 245 Gene3D G3DSA:3.40.50.850 42 244 2.8E-33 T 29-03-2018 CVS42_RS08430 ee4c40a767ba53fc36a3e815c71dc39a 245 Pfam PF00857 Isochorismatase family 54 204 1.4E-21 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CVS42_RS11425 618eb39c856ae729b33899cad7265700 413 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 411 6.7E-137 T 29-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CVS42_RS11425 618eb39c856ae729b33899cad7265700 413 Pfam PF02687 FtsX-like permease family 301 403 9.8E-10 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CVS42_RS11425 618eb39c856ae729b33899cad7265700 413 Pfam PF12704 MacB-like periplasmic core domain 29 200 3.2E-14 T 29-03-2018 IPR025857 MacB-like periplasmic core domain CVS42_RS20280 b8e24183457e3e75c5a008abc982d2a6 223 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 42 5.0E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS20280 b8e24183457e3e75c5a008abc982d2a6 223 Gene3D G3DSA:3.30.700.10 22 222 2.3E-15 T 29-03-2018 CVS42_RS20280 b8e24183457e3e75c5a008abc982d2a6 223 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 42 2.9E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS20280 b8e24183457e3e75c5a008abc982d2a6 223 SUPERFAMILY SSF54523 22 122 1.96E-13 T 29-03-2018 CVS42_RS20280 b8e24183457e3e75c5a008abc982d2a6 223 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS19315 933f7a5b979b6f709bff3c98168d6632 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 38.981 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CVS42_RS19315 933f7a5b979b6f709bff3c98168d6632 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 3 274 2.7E-100 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CVS42_RS19315 933f7a5b979b6f709bff3c98168d6632 276 Gene3D G3DSA:3.10.310.10 1 126 7.0E-48 T 29-03-2018 CVS42_RS19315 933f7a5b979b6f709bff3c98168d6632 276 SUPERFAMILY SSF54506 3 275 1.05E-53 T 29-03-2018 CVS42_RS19315 933f7a5b979b6f709bff3c98168d6632 276 Pfam PF01678 Diaminopimelate epimerase 154 269 4.7E-30 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CVS42_RS19315 933f7a5b979b6f709bff3c98168d6632 276 Pfam PF01678 Diaminopimelate epimerase 5 125 9.8E-34 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CVS42_RS19315 933f7a5b979b6f709bff3c98168d6632 276 Gene3D G3DSA:3.10.310.10 127 263 1.3E-49 T 29-03-2018 CVS42_RS19315 933f7a5b979b6f709bff3c98168d6632 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 29-03-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CVS42_RS18610 47483e3d818b216b68c0572aeb1ca06c 420 Pfam PF02308 MgtC family 12 135 3.7E-14 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CVS42_RS18610 47483e3d818b216b68c0572aeb1ca06c 420 Pfam PF13194 Domain of unknown function (DUF4010) 184 393 4.9E-63 T 29-03-2018 IPR025105 Domain of unknown function DUF4010 CVS42_RS04540 f5562370e473f943e14f03955f717b12 312 SUPERFAMILY SSF55073 152 309 1.18E-43 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS04540 f5562370e473f943e14f03955f717b12 312 Gene3D G3DSA:3.30.450.20 1 139 4.5E-13 T 29-03-2018 CVS42_RS04540 f5562370e473f943e14f03955f717b12 312 Gene3D G3DSA:3.30.70.270 140 311 4.2E-50 T 29-03-2018 CVS42_RS04540 f5562370e473f943e14f03955f717b12 312 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 145 309 3.8E-46 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS04540 f5562370e473f943e14f03955f717b12 312 SMART SM00267 136 310 2.1E-55 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS04540 f5562370e473f943e14f03955f717b12 312 SUPERFAMILY SSF55785 9 134 2.51E-6 T 29-03-2018 IPR000014 PAS domain CVS42_RS04540 f5562370e473f943e14f03955f717b12 312 Pfam PF00990 Diguanylate cyclase, GGDEF domain 148 306 1.1E-44 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS10820 08bd00e0713fe815f816dacd52875101 116 SUPERFAMILY SSF52091 1 104 4.32E-20 T 29-03-2018 IPR002645 STAS domain CVS42_RS10820 08bd00e0713fe815f816dacd52875101 116 Pfam PF01740 STAS domain 39 102 4.3E-10 T 29-03-2018 IPR002645 STAS domain CVS42_RS10820 08bd00e0713fe815f816dacd52875101 116 Gene3D G3DSA:3.30.750.24 1 108 3.1E-14 T 29-03-2018 IPR002645 STAS domain CVS42_RS05140 9efaffe7db052908dec1441ed1d952c6 445 Gene3D G3DSA:3.75.10.20 2 445 4.0E-222 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CVS42_RS05140 9efaffe7db052908dec1441ed1d952c6 445 SUPERFAMILY SSF55909 3 445 2.35E-209 T 29-03-2018 CVS42_RS05140 9efaffe7db052908dec1441ed1d952c6 445 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 445 60.625 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CVS42_RS05140 9efaffe7db052908dec1441ed1d952c6 445 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 4 444 4.7E-224 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CVS42_RS05140 9efaffe7db052908dec1441ed1d952c6 445 Pfam PF04996 Succinylarginine dihydrolase 3 444 1.6E-226 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CVS42_RS05835 279a17108797a8a7e95fb8391dca5b60 94 Pfam PF07216 LcrG protein 8 94 1.9E-26 T 29-03-2018 IPR009863 Type III secretion protein, LcrG CVS42_RS05835 279a17108797a8a7e95fb8391dca5b60 94 TIGRFAM TIGR02573 LcrG_PcrG: type III secretion protein LcrG 9 94 4.3E-27 T 29-03-2018 IPR009863 Type III secretion protein, LcrG CVS42_RS05835 279a17108797a8a7e95fb8391dca5b60 94 ProDom PD020116 PLASMID ACRG TYPE III G SECRETION REGULATOR LCRG LOCUS RESPONSE 9 94 4.0E-41 T 29-03-2018 IPR009863 Type III secretion protein, LcrG CVS42_RS02560 be0556585304d1aa380d9472658041b6 198 Pfam PF01725 Ham1 family 4 192 7.6E-56 T 29-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 CVS42_RS02560 be0556585304d1aa380d9472658041b6 198 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 7.5E-59 T 29-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 CVS42_RS02560 be0556585304d1aa380d9472658041b6 198 SUPERFAMILY SSF52972 1 194 1.65E-71 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CVS42_RS02560 be0556585304d1aa380d9472658041b6 198 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 48.397 T 29-03-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 CVS42_RS02560 be0556585304d1aa380d9472658041b6 198 Gene3D G3DSA:3.90.950.10 1 198 7.6E-76 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CVS42_RS06470 c5a02856d0ee175ba6877769dc5ab05e 218 SUPERFAMILY SSF55620 22 216 6.82E-76 T 29-03-2018 CVS42_RS06470 c5a02856d0ee175ba6877769dc5ab05e 218 Gene3D G3DSA:3.30.1130.10 87 217 9.8E-47 T 29-03-2018 CVS42_RS06470 c5a02856d0ee175ba6877769dc5ab05e 218 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 4.2E-81 T 29-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CVS42_RS06470 c5a02856d0ee175ba6877769dc5ab05e 218 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 34.932 T 29-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CVS42_RS06470 c5a02856d0ee175ba6877769dc5ab05e 218 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 29-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CVS42_RS06470 c5a02856d0ee175ba6877769dc5ab05e 218 Gene3D G3DSA:1.10.286.10 7 83 2.8E-24 T 29-03-2018 CVS42_RS06470 c5a02856d0ee175ba6877769dc5ab05e 218 Pfam PF01227 GTP cyclohydrolase I 38 214 1.0E-64 T 29-03-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CVS42_RS06470 c5a02856d0ee175ba6877769dc5ab05e 218 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 29-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CVS42_RS00385 2b8136715ed3b9028f5aab9e2a8dc54f 163 SMART SM00360 73 145 2.6E-21 T 29-03-2018 IPR000504 RNA recognition motif domain GO:0003676 CVS42_RS00385 2b8136715ed3b9028f5aab9e2a8dc54f 163 Gene3D G3DSA:3.30.70.330 55 163 6.5E-27 T 29-03-2018 CVS42_RS00385 2b8136715ed3b9028f5aab9e2a8dc54f 163 SUPERFAMILY SSF54928 60 155 2.15E-26 T 29-03-2018 IPR000504 RNA recognition motif domain GO:0003676 CVS42_RS00385 2b8136715ed3b9028f5aab9e2a8dc54f 163 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 74 143 1.3E-18 T 29-03-2018 IPR000504 RNA recognition motif domain GO:0003676 CVS42_RS04030 912f39c706088366defe0542c91ed516 574 Pfam PF00149 Calcineurin-like phosphoesterase 39 260 5.3E-19 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CVS42_RS04030 912f39c706088366defe0542c91ed516 574 ProSitePatterns PS00786 5'-nucleotidase signature 2. 114 125 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04030 912f39c706088366defe0542c91ed516 574 Gene3D G3DSA:3.60.21.10 33 379 1.8E-76 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS04030 912f39c706088366defe0542c91ed516 574 Pfam PF02872 5'-nucleotidase, C-terminal domain 380 528 4.5E-31 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04030 912f39c706088366defe0542c91ed516 574 SUPERFAMILY SSF55816 380 555 8.76E-41 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04030 912f39c706088366defe0542c91ed516 574 PRINTS PR01607 Apyrase family signature 434 457 5.9E-46 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04030 912f39c706088366defe0542c91ed516 574 PRINTS PR01607 Apyrase family signature 503 522 5.9E-46 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04030 912f39c706088366defe0542c91ed516 574 PRINTS PR01607 Apyrase family signature 244 267 5.9E-46 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04030 912f39c706088366defe0542c91ed516 574 PRINTS PR01607 Apyrase family signature 37 55 5.9E-46 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04030 912f39c706088366defe0542c91ed516 574 PRINTS PR01607 Apyrase family signature 213 230 5.9E-46 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04030 912f39c706088366defe0542c91ed516 574 PRINTS PR01607 Apyrase family signature 290 310 5.9E-46 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04030 912f39c706088366defe0542c91ed516 574 Gene3D G3DSA:3.90.780.10 380 564 1.3E-36 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04030 912f39c706088366defe0542c91ed516 574 SUPERFAMILY SSF56300 35 357 1.94E-86 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS04030 912f39c706088366defe0542c91ed516 574 ProSitePatterns PS00785 5'-nucleotidase signature 1. 39 51 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS14190 53fce1229a00e396718eee1563ae460c 231 Pfam PF00849 RNA pseudouridylate synthase 25 179 1.8E-25 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS14190 53fce1229a00e396718eee1563ae460c 231 SUPERFAMILY SSF55120 12 230 3.04E-56 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS14190 53fce1229a00e396718eee1563ae460c 231 Gene3D G3DSA:3.30.2350.10 16 231 1.1E-54 T 29-03-2018 CVS42_RS14190 53fce1229a00e396718eee1563ae460c 231 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS12475 ecec9187d64b9341b3b99402cabac33a 495 Gene3D G3DSA:3.50.50.60 2 390 1.5E-60 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS12475 ecec9187d64b9341b3b99402cabac33a 495 Pfam PF01266 FAD dependent oxidoreductase 6 323 5.2E-46 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CVS42_RS12475 ecec9187d64b9341b3b99402cabac33a 495 SUPERFAMILY SSF54373 226 319 3.92E-5 T 29-03-2018 CVS42_RS12475 ecec9187d64b9341b3b99402cabac33a 495 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 10 27 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CVS42_RS12475 ecec9187d64b9341b3b99402cabac33a 495 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 480 1.4E-8 T 29-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CVS42_RS12475 ecec9187d64b9341b3b99402cabac33a 495 SUPERFAMILY SSF51905 312 368 2.43E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS12475 ecec9187d64b9341b3b99402cabac33a 495 SUPERFAMILY SSF51905 1 260 2.43E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS12475 ecec9187d64b9341b3b99402cabac33a 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 34 46 1.9E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CVS42_RS12475 ecec9187d64b9341b3b99402cabac33a 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 79 91 1.9E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CVS42_RS12475 ecec9187d64b9341b3b99402cabac33a 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 18 28 1.9E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CVS42_RS12475 ecec9187d64b9341b3b99402cabac33a 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 1.9E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CVS42_RS12475 ecec9187d64b9341b3b99402cabac33a 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 1.9E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CVS42_RS12475 ecec9187d64b9341b3b99402cabac33a 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 5 17 1.9E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CVS42_RS12475 ecec9187d64b9341b3b99402cabac33a 495 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CVS42_RS20070 53afb00792a3cc88c64b67fbd33ec6a5 406 SMART SM00876 291 395 9.6E-30 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CVS42_RS20070 53afb00792a3cc88c64b67fbd33ec6a5 406 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 291 394 7.1E-22 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CVS42_RS20070 53afb00792a3cc88c64b67fbd33ec6a5 406 Gene3D G3DSA:3.20.20.70 49 402 1.2E-45 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS20070 53afb00792a3cc88c64b67fbd33ec6a5 406 Pfam PF04055 Radical SAM superfamily 115 252 2.9E-8 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS20070 53afb00792a3cc88c64b67fbd33ec6a5 406 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 37 401 2.8E-158 T 29-03-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 CVS42_RS20070 53afb00792a3cc88c64b67fbd33ec6a5 406 SUPERFAMILY SSF102114 71 366 4.84E-50 T 29-03-2018 CVS42_RS02360 8afe7482f3d20b5847182d43ae51b7fd 193 Gene3D G3DSA:1.20.1590.10 5 191 1.8E-61 T 29-03-2018 IPR023381 YP001051499.1-like domain CVS42_RS02360 8afe7482f3d20b5847182d43ae51b7fd 193 Pfam PF04222 Protein of unknown function (DUF416) 6 190 4.0E-67 T 29-03-2018 IPR007338 Protein of unknown function DUF416 CVS42_RS11400 8b5be0da9a8fb820107f5ee16b5fe401 200 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 9 199 43.568 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CVS42_RS11400 8b5be0da9a8fb820107f5ee16b5fe401 200 Pfam PF00574 Clp protease 19 198 9.3E-89 T 29-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CVS42_RS11400 8b5be0da9a8fb820107f5ee16b5fe401 200 PRINTS PR00127 Clp protease catalytic subunit P signature 65 85 3.3E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CVS42_RS11400 8b5be0da9a8fb820107f5ee16b5fe401 200 PRINTS PR00127 Clp protease catalytic subunit P signature 96 113 3.3E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CVS42_RS11400 8b5be0da9a8fb820107f5ee16b5fe401 200 PRINTS PR00127 Clp protease catalytic subunit P signature 25 40 3.3E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CVS42_RS11400 8b5be0da9a8fb820107f5ee16b5fe401 200 PRINTS PR00127 Clp protease catalytic subunit P signature 117 136 3.3E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CVS42_RS11400 8b5be0da9a8fb820107f5ee16b5fe401 200 PRINTS PR00127 Clp protease catalytic subunit P signature 174 193 3.3E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CVS42_RS11400 8b5be0da9a8fb820107f5ee16b5fe401 200 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 96 107 - T 29-03-2018 IPR018215 ClpP, Ser active site CVS42_RS11400 8b5be0da9a8fb820107f5ee16b5fe401 200 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 118 131 - T 29-03-2018 IPR033135 ClpP, histidine active site CVS42_RS11400 8b5be0da9a8fb820107f5ee16b5fe401 200 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 8 197 1.7E-107 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CVS42_RS11400 8b5be0da9a8fb820107f5ee16b5fe401 200 Gene3D G3DSA:3.90.226.10 8 200 5.9E-47 T 29-03-2018 CVS42_RS11400 8b5be0da9a8fb820107f5ee16b5fe401 200 SUPERFAMILY SSF52096 17 198 1.34E-74 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS16350 e7588708045513180480417415d36b8c 473 Gene3D G3DSA:3.40.50.620 1 150 1.5E-46 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS16350 e7588708045513180480417415d36b8c 473 SUPERFAMILY SSF48173 201 471 1.11E-108 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CVS42_RS16350 e7588708045513180480417415d36b8c 473 Gene3D G3DSA:1.10.579.10 294 473 8.3E-74 T 29-03-2018 CVS42_RS16350 e7588708045513180480417415d36b8c 473 Pfam PF03441 FAD binding domain of DNA photolyase 276 469 1.4E-82 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CVS42_RS16350 e7588708045513180480417415d36b8c 473 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 346 365 - T 29-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CVS42_RS16350 e7588708045513180480417415d36b8c 473 Gene3D G3DSA:1.25.40.80 151 292 1.5E-32 T 29-03-2018 CVS42_RS16350 e7588708045513180480417415d36b8c 473 SUPERFAMILY SSF52425 2 189 2.09E-52 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CVS42_RS16350 e7588708045513180480417415d36b8c 473 Pfam PF00875 DNA photolyase 3 169 4.4E-49 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CVS42_RS16350 e7588708045513180480417415d36b8c 473 PRINTS PR00147 DNA photolyase signature 385 399 1.3E-28 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CVS42_RS16350 e7588708045513180480417415d36b8c 473 PRINTS PR00147 DNA photolyase signature 346 364 1.3E-28 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CVS42_RS16350 e7588708045513180480417415d36b8c 473 PRINTS PR00147 DNA photolyase signature 326 342 1.3E-28 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CVS42_RS16350 e7588708045513180480417415d36b8c 473 PRINTS PR00147 DNA photolyase signature 142 158 1.3E-28 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CVS42_RS16350 e7588708045513180480417415d36b8c 473 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 326 338 - T 29-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CVS42_RS13205 75abcac01e069dc70bed3e62ef9b6600 430 Gene3D G3DSA:3.50.50.60 2 136 8.4E-15 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS13205 75abcac01e069dc70bed3e62ef9b6600 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 5.6E-13 T 29-03-2018 CVS42_RS13205 75abcac01e069dc70bed3e62ef9b6600 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.6E-13 T 29-03-2018 CVS42_RS13205 75abcac01e069dc70bed3e62ef9b6600 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 5.6E-13 T 29-03-2018 CVS42_RS13205 75abcac01e069dc70bed3e62ef9b6600 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 5.6E-13 T 29-03-2018 CVS42_RS13205 75abcac01e069dc70bed3e62ef9b6600 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 334 6.3E-65 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS13205 75abcac01e069dc70bed3e62ef9b6600 430 Gene3D G3DSA:3.50.50.60 137 344 6.4E-35 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS13205 75abcac01e069dc70bed3e62ef9b6600 430 SUPERFAMILY SSF51905 2 337 1.3E-32 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS13205 75abcac01e069dc70bed3e62ef9b6600 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 1.7E-7 T 29-03-2018 CVS42_RS13205 75abcac01e069dc70bed3e62ef9b6600 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.7E-7 T 29-03-2018 CVS42_RS13205 75abcac01e069dc70bed3e62ef9b6600 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.7E-7 T 29-03-2018 CVS42_RS10950 8588406ff3ef521b6124aae101297ee9 145 Gene3D G3DSA:3.40.630.30 1 143 3.7E-22 T 29-03-2018 CVS42_RS10950 8588406ff3ef521b6124aae101297ee9 145 SUPERFAMILY SSF55729 4 138 1.42E-22 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS10950 8588406ff3ef521b6124aae101297ee9 145 Pfam PF00583 Acetyltransferase (GNAT) family 43 129 3.7E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS14885 0b214c788fee4f90cc143e8c61c64c25 425 Gene3D G3DSA:3.50.50.60 17 404 2.2E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS14885 0b214c788fee4f90cc143e8c61c64c25 425 Pfam PF01266 FAD dependent oxidoreductase 29 379 1.1E-53 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CVS42_RS14885 0b214c788fee4f90cc143e8c61c64c25 425 SUPERFAMILY SSF51905 28 251 4.75E-41 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS14885 0b214c788fee4f90cc143e8c61c64c25 425 SUPERFAMILY SSF51905 353 411 4.75E-41 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS00900 b9d0a0f46ce7690f9e445e7739e0f40a 484 SUPERFAMILY SSF55961 337 476 6.47E-13 T 29-03-2018 CVS42_RS00900 b9d0a0f46ce7690f9e445e7739e0f40a 484 SUPERFAMILY SSF51735 8 294 2.3E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS00900 b9d0a0f46ce7690f9e445e7739e0f40a 484 Gene3D G3DSA:3.40.50.720 8 302 7.5E-24 T 29-03-2018 CVS42_RS00900 b9d0a0f46ce7690f9e445e7739e0f40a 484 Gene3D G3DSA:3.30.530.20 326 482 9.5E-12 T 29-03-2018 IPR023393 START-like domain CVS42_RS00900 b9d0a0f46ce7690f9e445e7739e0f40a 484 Pfam PF11066 Protein of unknown function (DUF2867) 337 466 4.1E-16 T 29-03-2018 IPR021295 Protein of unknown function DUF2867 CVS42_RS00900 b9d0a0f46ce7690f9e445e7739e0f40a 484 Pfam PF13460 NAD(P)H-binding 15 121 4.0E-13 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS10655 8b9bcf17cd5b6da90a04d451f3def424 262 Gene3D G3DSA:3.40.50.300 1 253 1.8E-44 T 29-03-2018 CVS42_RS10655 8b9bcf17cd5b6da90a04d451f3def424 262 Pfam PF00005 ABC transporter 26 175 1.5E-16 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS10655 8b9bcf17cd5b6da90a04d451f3def424 262 SMART SM00382 35 222 3.5E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS10655 8b9bcf17cd5b6da90a04d451f3def424 262 SUPERFAMILY SSF52540 22 235 5.43E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS14210 1385093c6ea606b01c93f8dad64ac9d7 209 Pfam PF13460 NAD(P)H-binding 8 148 9.9E-11 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS14210 1385093c6ea606b01c93f8dad64ac9d7 209 Gene3D G3DSA:3.40.50.720 2 205 1.3E-26 T 29-03-2018 CVS42_RS14210 1385093c6ea606b01c93f8dad64ac9d7 209 SUPERFAMILY SSF51735 2 197 1.65E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS10435 909508b81d055d4f64fe6fe693e09285 576 Pfam PF13519 von Willebrand factor type A domain 102 207 1.3E-13 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS10435 909508b81d055d4f64fe6fe693e09285 576 Gene3D G3DSA:1.25.40.10 358 559 2.1E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS10435 909508b81d055d4f64fe6fe693e09285 576 SUPERFAMILY SSF48452 370 448 6.75E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS10435 909508b81d055d4f64fe6fe693e09285 576 SUPERFAMILY SSF53300 102 269 1.16E-15 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS10435 909508b81d055d4f64fe6fe693e09285 576 SMART SM00327 99 274 9.5E-5 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS10435 909508b81d055d4f64fe6fe693e09285 576 Gene3D G3DSA:3.40.50.410 100 279 5.3E-15 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS08675 04edadcfb9a7a7dad1ca65b8d004a645 401 Pfam PF03918 Cytochrome C biogenesis protein 13 135 8.4E-44 T 29-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family CVS42_RS08675 04edadcfb9a7a7dad1ca65b8d004a645 401 SUPERFAMILY SSF48452 275 378 3.53E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS08675 04edadcfb9a7a7dad1ca65b8d004a645 401 Gene3D G3DSA:1.25.40.10 317 400 1.4E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS08675 04edadcfb9a7a7dad1ca65b8d004a645 401 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 10 129 6.5E-53 T 29-03-2018 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF CVS42_RS08675 04edadcfb9a7a7dad1ca65b8d004a645 401 Gene3D G3DSA:1.25.40.10 174 316 1.2E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS00940 505a9ea906ac2fe09768b7cb4cfb0e62 690 SMART SM00490 502 586 3.1E-22 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS00940 505a9ea906ac2fe09768b7cb4cfb0e62 690 Gene3D G3DSA:2.40.50.140 51 142 8.7E-13 T 29-03-2018 CVS42_RS00940 505a9ea906ac2fe09768b7cb4cfb0e62 690 Pfam PF00271 Helicase conserved C-terminal domain 478 585 5.5E-16 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS00940 505a9ea906ac2fe09768b7cb4cfb0e62 690 Pfam PF00270 DEAD/DEAH box helicase 289 405 7.5E-17 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CVS42_RS00940 505a9ea906ac2fe09768b7cb4cfb0e62 690 Pfam PF17191 RecG wedge domain 12 169 1.2E-19 T 29-03-2018 IPR033454 RecG, wedge domain CVS42_RS00940 505a9ea906ac2fe09768b7cb4cfb0e62 690 SMART SM00487 263 457 4.5E-29 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS00940 505a9ea906ac2fe09768b7cb4cfb0e62 690 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 26 661 1.1E-226 T 29-03-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 CVS42_RS00940 505a9ea906ac2fe09768b7cb4cfb0e62 690 SUPERFAMILY SSF52540 290 340 7.34E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00940 505a9ea906ac2fe09768b7cb4cfb0e62 690 SUPERFAMILY SSF52540 505 650 7.34E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00940 505a9ea906ac2fe09768b7cb4cfb0e62 690 Gene3D G3DSA:1.10.150.20 2 50 5.6E-6 T 29-03-2018 CVS42_RS00940 505a9ea906ac2fe09768b7cb4cfb0e62 690 Gene3D G3DSA:3.40.50.300 455 627 9.7E-27 T 29-03-2018 CVS42_RS00940 505a9ea906ac2fe09768b7cb4cfb0e62 690 SUPERFAMILY SSF50249 7 173 3.43E-39 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS00940 505a9ea906ac2fe09768b7cb4cfb0e62 690 SUPERFAMILY SSF52540 215 451 2.06E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00940 505a9ea906ac2fe09768b7cb4cfb0e62 690 Gene3D G3DSA:3.40.50.300 247 454 8.8E-36 T 29-03-2018 CVS42_RS13055 7a6ef7296d5733e037650eef95c7ed41 231 SUPERFAMILY SSF53448 3 224 2.11E-57 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS13055 7a6ef7296d5733e037650eef95c7ed41 231 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 3 224 1.5E-102 T 29-03-2018 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 CVS42_RS13055 7a6ef7296d5733e037650eef95c7ed41 231 Pfam PF02348 Cytidylyltransferase 3 134 2.2E-32 T 29-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CVS42_RS13055 7a6ef7296d5733e037650eef95c7ed41 231 Gene3D G3DSA:3.90.550.10 2 228 1.7E-32 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS03965 c14962616ca2e43737606a0da75f05d0 383 SMART SM00267 208 382 6.4E-68 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS03965 c14962616ca2e43737606a0da75f05d0 383 Pfam PF00990 Diguanylate cyclase, GGDEF domain 219 378 4.0E-51 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS03965 c14962616ca2e43737606a0da75f05d0 383 SUPERFAMILY SSF55073 224 381 3.53E-50 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS03965 c14962616ca2e43737606a0da75f05d0 383 Pfam PF17178 Membrane-associated sensor 28 218 5.4E-27 T 29-03-2018 IPR033444 Membrane-associated sensor MASE5 CVS42_RS03965 c14962616ca2e43737606a0da75f05d0 383 Gene3D G3DSA:3.30.70.270 212 383 1.5E-57 T 29-03-2018 CVS42_RS03965 c14962616ca2e43737606a0da75f05d0 383 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 215 382 1.4E-50 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS18565 39068739c7f7cc5984846720465fd60f 610 SUPERFAMILY SSF55486 6 544 6.59E-68 T 29-03-2018 CVS42_RS18565 39068739c7f7cc5984846720465fd60f 610 Gene3D G3DSA:1.10.1370.10 2 557 1.8E-45 T 29-03-2018 CVS42_RS18565 39068739c7f7cc5984846720465fd60f 610 Pfam PF01432 Peptidase family M3 139 543 5.0E-21 T 29-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CVS42_RS19080 2332d0aa0c71129fc81e62549c716ade 192 SMART SM00749 129 192 7.1E-7 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CVS42_RS19080 2332d0aa0c71129fc81e62549c716ade 192 SMART SM00749 51 114 12.0 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CVS42_RS19080 2332d0aa0c71129fc81e62549c716ade 192 Pfam PF04972 BON domain 124 190 1.2E-16 T 29-03-2018 IPR007055 BON domain CVS42_RS19080 2332d0aa0c71129fc81e62549c716ade 192 Pfam PF04972 BON domain 46 114 1.6E-11 T 29-03-2018 IPR007055 BON domain CVS42_RS05500 57539764bd50c3207986dc0a66dc790e 130 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 50 120 2.4E-24 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CVS42_RS05500 57539764bd50c3207986dc0a66dc790e 130 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 48 121 9.1E-33 T 29-03-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CVS42_RS05500 57539764bd50c3207986dc0a66dc790e 130 PRINTS PR00956 Flagellar motor switch protein FliN signature 50 66 2.7E-28 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CVS42_RS05500 57539764bd50c3207986dc0a66dc790e 130 PRINTS PR00956 Flagellar motor switch protein FliN signature 67 83 2.7E-28 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CVS42_RS05500 57539764bd50c3207986dc0a66dc790e 130 PRINTS PR00956 Flagellar motor switch protein FliN signature 83 96 2.7E-28 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CVS42_RS05500 57539764bd50c3207986dc0a66dc790e 130 PRINTS PR00956 Flagellar motor switch protein FliN signature 96 111 2.7E-28 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CVS42_RS05500 57539764bd50c3207986dc0a66dc790e 130 SUPERFAMILY SSF101801 48 128 3.66E-24 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CVS42_RS05500 57539764bd50c3207986dc0a66dc790e 130 Gene3D G3DSA:2.30.330.10 36 130 1.7E-29 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CVS42_RS19520 446cc80e2c0edcd2211332fabf515b29 290 PIRSF PIRSF001365 1 290 1.9E-92 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CVS42_RS19520 446cc80e2c0edcd2211332fabf515b29 290 Pfam PF00701 Dihydrodipicolinate synthetase family 2 286 1.2E-87 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CVS42_RS19520 446cc80e2c0edcd2211332fabf515b29 290 SMART SM01130 1 288 8.3E-140 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CVS42_RS19520 446cc80e2c0edcd2211332fabf515b29 290 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 37 54 - T 29-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS19520 446cc80e2c0edcd2211332fabf515b29 290 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 286 62.327 T 29-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS19520 446cc80e2c0edcd2211332fabf515b29 290 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 132 162 - T 29-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CVS42_RS19520 446cc80e2c0edcd2211332fabf515b29 290 Gene3D G3DSA:3.20.20.70 1 290 3.6E-98 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS19520 446cc80e2c0edcd2211332fabf515b29 290 SUPERFAMILY SSF51569 2 288 2.41E-101 T 29-03-2018 CVS42_RS19520 446cc80e2c0edcd2211332fabf515b29 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 5.2E-29 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CVS42_RS19520 446cc80e2c0edcd2211332fabf515b29 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 5.2E-29 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CVS42_RS19520 446cc80e2c0edcd2211332fabf515b29 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 5.2E-29 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CVS42_RS19520 446cc80e2c0edcd2211332fabf515b29 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 5.2E-29 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CVS42_RS19520 446cc80e2c0edcd2211332fabf515b29 290 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 286 1.4E-93 T 29-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS10920 0bccf06e4248f67c1a6295ced22b1a9d 1000 Pfam PF05359 Domain of Unknown Function (DUF748) 397 551 2.1E-27 T 29-03-2018 IPR008023 Protein of unknown function DUF748 CVS42_RS10920 0bccf06e4248f67c1a6295ced22b1a9d 1000 Pfam PF05359 Domain of Unknown Function (DUF748) 158 312 2.8E-25 T 29-03-2018 IPR008023 Protein of unknown function DUF748 CVS42_RS10920 0bccf06e4248f67c1a6295ced22b1a9d 1000 Pfam PF05359 Domain of Unknown Function (DUF748) 612 758 7.8E-35 T 29-03-2018 IPR008023 Protein of unknown function DUF748 CVS42_RS10920 0bccf06e4248f67c1a6295ced22b1a9d 1000 Gene3D G3DSA:3.30.1330.60 817 987 7.7E-15 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS12150 14392b84e089feba721bf32501b66466 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 345 364 6.4E-38 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12150 14392b84e089feba721bf32501b66466 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 147 166 6.4E-38 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12150 14392b84e089feba721bf32501b66466 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 257 281 6.4E-38 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12150 14392b84e089feba721bf32501b66466 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 397 423 6.4E-38 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12150 14392b84e089feba721bf32501b66466 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 182 206 6.4E-38 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12150 14392b84e089feba721bf32501b66466 514 Pfam PF00361 Proton-conducting membrane transporter 141 439 1.2E-70 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12150 14392b84e089feba721bf32501b66466 514 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 5 502 6.1E-174 T 29-03-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS09975 2f6f7bef3c8a0277bf5ea449b6f2020c 291 Pfam PF00561 alpha/beta hydrolase fold 153 205 1.2E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS09975 2f6f7bef3c8a0277bf5ea449b6f2020c 291 Gene3D G3DSA:3.40.50.1820 93 291 1.2E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS09975 2f6f7bef3c8a0277bf5ea449b6f2020c 291 SUPERFAMILY SSF53474 104 274 1.17E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 SMART SM00437 278 558 1.4E-89 T 29-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 Pfam PF01751 Toprim domain 3 133 4.6E-14 T 29-03-2018 IPR006171 TOPRIM domain CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 Pfam PF01131 DNA topoisomerase 155 592 4.8E-116 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 SMART SM00436 126 221 9.0E-36 T 29-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 644 59.456 T 29-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 Gene3D G3DSA:3.40.50.140 1 154 1.5E-40 T 29-03-2018 CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 635 4.2E-242 T 29-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 6.5E-24 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 6.5E-24 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 6.5E-24 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 6.5E-24 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 6.5E-24 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 Gene3D G3DSA:2.70.20.10 363 481 8.0E-25 T 29-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 330 - T 29-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 SMART SM00493 1 124 1.6E-21 T 29-03-2018 IPR006171 TOPRIM domain CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 SUPERFAMILY SSF56712 1 606 3.92E-187 T 29-03-2018 IPR023405 DNA topoisomerase, type IA, core domain CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 Gene3D G3DSA:1.10.460.10 155 358 1.5E-38 T 29-03-2018 CVS42_RS20730 4c4334c48338c5b077500f08b2dab38e 651 Gene3D G3DSA:1.10.460.10 482 651 6.7E-24 T 29-03-2018 CVS42_RS05840 1e6e336ac9b621b679d81badf5af9a62 361 Pfam PF04792 V antigen (LcrV) protein 270 361 4.8E-44 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 CVS42_RS05840 1e6e336ac9b621b679d81badf5af9a62 361 Pfam PF04792 V antigen (LcrV) protein 4 263 4.7E-38 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 CVS42_RS05840 1e6e336ac9b621b679d81badf5af9a62 361 SUPERFAMILY SSF103388 31 219 8.24E-108 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 CVS42_RS05840 1e6e336ac9b621b679d81badf5af9a62 361 SUPERFAMILY SSF103388 261 360 8.24E-108 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 CVS42_RS05840 1e6e336ac9b621b679d81badf5af9a62 361 PRINTS PR01592 Low calcium response V antigen signature 128 148 6.7E-13 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 CVS42_RS05840 1e6e336ac9b621b679d81badf5af9a62 361 PRINTS PR01592 Low calcium response V antigen signature 106 124 6.7E-13 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 CVS42_RS05840 1e6e336ac9b621b679d81badf5af9a62 361 PRINTS PR01592 Low calcium response V antigen signature 151 173 6.7E-13 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 CVS42_RS18325 1ced805ed76112ea39e884dc8151b142 163 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 5 154 41.032 T 29-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 CVS42_RS18325 1ced805ed76112ea39e884dc8151b142 163 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 69 8.0E-8 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CVS42_RS18325 1ced805ed76112ea39e884dc8151b142 163 SUPERFAMILY SSF46767 73 154 9.42E-34 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CVS42_RS18325 1ced805ed76112ea39e884dc8151b142 163 SUPERFAMILY SSF53155 1 78 2.55E-14 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CVS42_RS18325 1ced805ed76112ea39e884dc8151b142 163 Gene3D G3DSA:1.10.10.10 70 156 7.3E-36 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18325 1ced805ed76112ea39e884dc8151b142 163 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 124 130 - T 29-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CVS42_RS18325 1ced805ed76112ea39e884dc8151b142 163 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 75 154 2.3E-34 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CVS42_RS18325 1ced805ed76112ea39e884dc8151b142 163 Gene3D G3DSA:3.30.160.70 1 69 3.2E-15 T 29-03-2018 CVS42_RS18325 1ced805ed76112ea39e884dc8151b142 163 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 74 153 3.4E-38 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CVS42_RS02435 ca59b2a1e86793f23536aed149c6e82a 493 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 67 490 9.7E-182 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CVS42_RS02435 ca59b2a1e86793f23536aed149c6e82a 493 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 491 5.4E-216 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CVS42_RS20440 27567ecfa2a4149e480bbf3b38461f94 280 SUPERFAMILY SSF51735 40 264 3.66E-62 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS20440 27567ecfa2a4149e480bbf3b38461f94 280 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 44 203 0.0037 T 29-03-2018 CVS42_RS20440 27567ecfa2a4149e480bbf3b38461f94 280 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 173 201 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CVS42_RS20440 27567ecfa2a4149e480bbf3b38461f94 280 Pfam PF00106 short chain dehydrogenase 46 228 3.6E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS20440 27567ecfa2a4149e480bbf3b38461f94 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 242 262 1.3E-30 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS20440 27567ecfa2a4149e480bbf3b38461f94 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 45 62 1.3E-30 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS20440 27567ecfa2a4149e480bbf3b38461f94 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 224 1.3E-30 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS20440 27567ecfa2a4149e480bbf3b38461f94 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 176 1.3E-30 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS20440 27567ecfa2a4149e480bbf3b38461f94 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 205 1.3E-30 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS20440 27567ecfa2a4149e480bbf3b38461f94 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 113 124 1.3E-30 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS20440 27567ecfa2a4149e480bbf3b38461f94 280 Gene3D G3DSA:3.40.50.720 28 272 1.8E-56 T 29-03-2018 CVS42_RS20440 27567ecfa2a4149e480bbf3b38461f94 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 113 124 9.7E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS20440 27567ecfa2a4149e480bbf3b38461f94 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 174 9.7E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS20440 27567ecfa2a4149e480bbf3b38461f94 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 205 9.7E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS04500 70fc65d164740ec23ecb0921128d89e3 514 Gene3D G3DSA:3.60.110.10 216 488 9.7E-41 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CVS42_RS04500 70fc65d164740ec23ecb0921128d89e3 514 Pfam PF00795 Carbon-nitrogen hydrolase 220 473 2.3E-34 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CVS42_RS04500 70fc65d164740ec23ecb0921128d89e3 514 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 62 455 1.5E-96 T 29-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CVS42_RS04500 70fc65d164740ec23ecb0921128d89e3 514 SUPERFAMILY SSF56317 217 489 2.09E-42 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CVS42_RS04500 70fc65d164740ec23ecb0921128d89e3 514 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 9 493 24.367 T 29-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CVS42_RS01160 7e93e6e0ce48e099b04deba75dbcc295 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 9.7E-69 T 29-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CVS42_RS01160 7e93e6e0ce48e099b04deba75dbcc295 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 29-03-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site CVS42_RS01160 7e93e6e0ce48e099b04deba75dbcc295 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 75 2.5E-29 T 29-03-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CVS42_RS01160 7e93e6e0ce48e099b04deba75dbcc295 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 5.6E-30 T 29-03-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CVS42_RS01160 7e93e6e0ce48e099b04deba75dbcc295 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.216 T 29-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CVS42_RS01160 7e93e6e0ce48e099b04deba75dbcc295 166 Gene3D G3DSA:3.30.230.10 76 166 2.2E-33 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CVS42_RS01160 7e93e6e0ce48e099b04deba75dbcc295 166 Gene3D G3DSA:3.30.160.20 10 71 1.3E-27 T 29-03-2018 CVS42_RS01160 7e93e6e0ce48e099b04deba75dbcc295 166 SUPERFAMILY SSF54211 79 158 4.05E-27 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS01160 7e93e6e0ce48e099b04deba75dbcc295 166 SUPERFAMILY SSF54768 9 76 1.99E-23 T 29-03-2018 CVS42_RS06200 0f15a49edd5299f52118391a8d833525 220 SMART SM00448 1 117 3.5E-7 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06200 0f15a49edd5299f52118391a8d833525 220 SUPERFAMILY SSF52172 1 120 3.13E-18 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS06200 0f15a49edd5299f52118391a8d833525 220 SUPERFAMILY SSF47226 101 206 2.09E-11 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CVS42_RS06200 0f15a49edd5299f52118391a8d833525 220 Pfam PF00072 Response regulator receiver domain 3 116 9.8E-13 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06200 0f15a49edd5299f52118391a8d833525 220 Gene3D G3DSA:3.40.50.2300 1 108 1.4E-14 T 29-03-2018 CVS42_RS06200 0f15a49edd5299f52118391a8d833525 220 Gene3D G3DSA:1.20.120.160 109 216 3.5E-10 T 29-03-2018 CVS42_RS08605 58eaf667849ae0e2414c2d5cee27c740 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 2.1E-16 T 29-03-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CVS42_RS08605 58eaf667849ae0e2414c2d5cee27c740 935 PIRSF PIRSF000157 1 935 0.0 T 29-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CVS42_RS08605 58eaf667849ae0e2414c2d5cee27c740 935 Pfam PF00676 Dehydrogenase E1 component 219 517 3.0E-52 T 29-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 CVS42_RS08605 58eaf667849ae0e2414c2d5cee27c740 935 Pfam PF02779 Transketolase, pyrimidine binding domain 594 788 2.7E-64 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CVS42_RS08605 58eaf667849ae0e2414c2d5cee27c740 935 SUPERFAMILY SSF52518 156 555 2.12E-86 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS08605 58eaf667849ae0e2414c2d5cee27c740 935 Gene3D G3DSA:1.10.287.1150 83 167 5.4E-22 T 29-03-2018 CVS42_RS08605 58eaf667849ae0e2414c2d5cee27c740 935 SMART SM00861 594 787 5.3E-60 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CVS42_RS08605 58eaf667849ae0e2414c2d5cee27c740 935 Gene3D G3DSA:3.40.50.970 590 803 2.5E-55 T 29-03-2018 CVS42_RS08605 58eaf667849ae0e2414c2d5cee27c740 935 SUPERFAMILY SSF52518 576 794 9.81E-53 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS08605 58eaf667849ae0e2414c2d5cee27c740 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 792 933 3.3E-53 T 29-03-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CVS42_RS08605 58eaf667849ae0e2414c2d5cee27c740 935 Gene3D G3DSA:3.40.50.970 168 525 1.3E-93 T 29-03-2018 CVS42_RS08605 58eaf667849ae0e2414c2d5cee27c740 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 29-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CVS42_RS01865 edd56a85336ecf6e21120bbb5bbc3382 877 SUPERFAMILY SSF51621 6 877 0.0 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CVS42_RS01865 edd56a85336ecf6e21120bbb5bbc3382 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 18.312 T 29-03-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CVS42_RS01865 edd56a85336ecf6e21120bbb5bbc3382 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 128 877 6.2E-281 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CVS42_RS01865 edd56a85336ecf6e21120bbb5bbc3382 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 706 732 1.6E-64 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CVS42_RS01865 edd56a85336ecf6e21120bbb5bbc3382 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.6E-64 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CVS42_RS01865 edd56a85336ecf6e21120bbb5bbc3382 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.6E-64 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CVS42_RS01865 edd56a85336ecf6e21120bbb5bbc3382 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 532 552 1.6E-64 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CVS42_RS01865 edd56a85336ecf6e21120bbb5bbc3382 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 383 403 1.6E-64 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CVS42_RS01865 edd56a85336ecf6e21120bbb5bbc3382 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 574 603 1.6E-64 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CVS42_RS01865 edd56a85336ecf6e21120bbb5bbc3382 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.6E-64 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CVS42_RS01865 edd56a85336ecf6e21120bbb5bbc3382 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 29-03-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CVS42_RS01865 edd56a85336ecf6e21120bbb5bbc3382 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 534 546 - T 29-03-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CVS42_RS01865 edd56a85336ecf6e21120bbb5bbc3382 877 Gene3D G3DSA:1.20.1440.90 274 385 2.2E-24 T 29-03-2018 CVS42_RS13760 fde8ea5a9b557fac714669ae021d47f4 650 Gene3D G3DSA:2.170.130.10 45 171 4.0E-34 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS13760 fde8ea5a9b557fac714669ae021d47f4 650 Pfam PF00593 TonB dependent receptor 268 647 3.7E-61 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS13760 fde8ea5a9b557fac714669ae021d47f4 650 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 156 9.8E-27 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS13760 fde8ea5a9b557fac714669ae021d47f4 650 SUPERFAMILY SSF56935 37 650 6.87E-124 T 29-03-2018 CVS42_RS13760 fde8ea5a9b557fac714669ae021d47f4 650 Gene3D G3DSA:2.40.170.20 172 650 1.3E-77 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS10095 b5b11f123c91db326c0bd9bdc738b9c3 78 Gene3D G3DSA:1.10.1200.10 1 78 2.0E-27 T 29-03-2018 CVS42_RS10095 b5b11f123c91db326c0bd9bdc738b9c3 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 6.5E-16 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CVS42_RS10095 b5b11f123c91db326c0bd9bdc738b9c3 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 1.9E-36 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CVS42_RS10095 b5b11f123c91db326c0bd9bdc738b9c3 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.126 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CVS42_RS10095 b5b11f123c91db326c0bd9bdc738b9c3 78 SUPERFAMILY SSF47336 2 76 5.37E-23 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CVS42_RS10095 b5b11f123c91db326c0bd9bdc738b9c3 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site CVS42_RS08440 7e025edfa0dc6c8a4313b5861ce98415 302 Gene3D G3DSA:3.40.190.10 183 274 8.1E-19 T 29-03-2018 CVS42_RS08440 7e025edfa0dc6c8a4313b5861ce98415 302 SUPERFAMILY SSF46785 6 119 4.3E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08440 7e025edfa0dc6c8a4313b5861ce98415 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 3.1E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS08440 7e025edfa0dc6c8a4313b5861ce98415 302 SUPERFAMILY SSF53850 96 300 1.92E-39 T 29-03-2018 CVS42_RS08440 7e025edfa0dc6c8a4313b5861ce98415 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 3.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS08440 7e025edfa0dc6c8a4313b5861ce98415 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 3.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS08440 7e025edfa0dc6c8a4313b5861ce98415 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 3.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS08440 7e025edfa0dc6c8a4313b5861ce98415 302 Gene3D G3DSA:3.40.190.10 96 182 6.8E-19 T 29-03-2018 CVS42_RS08440 7e025edfa0dc6c8a4313b5861ce98415 302 Pfam PF03466 LysR substrate binding domain 95 299 1.5E-38 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS08440 7e025edfa0dc6c8a4313b5861ce98415 302 Gene3D G3DSA:1.10.10.10 4 91 1.2E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS01255 00e153b8625dc1587ce57b5728bad2cb 240 SUPERFAMILY SSF52172 4 130 7.4E-44 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS01255 00e153b8625dc1587ce57b5728bad2cb 240 Pfam PF00072 Response regulator receiver domain 8 117 2.7E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS01255 00e153b8625dc1587ce57b5728bad2cb 240 SMART SM00862 157 233 1.0E-25 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS01255 00e153b8625dc1587ce57b5728bad2cb 240 SUPERFAMILY SSF46894 138 234 1.28E-25 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS01255 00e153b8625dc1587ce57b5728bad2cb 240 SMART SM00448 6 116 3.8E-47 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS01255 00e153b8625dc1587ce57b5728bad2cb 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 233 3.8E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS01255 00e153b8625dc1587ce57b5728bad2cb 240 Gene3D G3DSA:1.10.10.10 135 240 1.3E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS01255 00e153b8625dc1587ce57b5728bad2cb 240 Gene3D G3DSA:3.40.50.2300 1 134 1.7E-41 T 29-03-2018 CVS42_RS04965 c7d67f57d72200c2986db73fc711a7ab 662 SUPERFAMILY SSF55816 399 602 2.35E-26 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04965 c7d67f57d72200c2986db73fc711a7ab 662 Pfam PF00149 Calcineurin-like phosphoesterase 31 274 1.7E-9 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CVS42_RS04965 c7d67f57d72200c2986db73fc711a7ab 662 Gene3D G3DSA:3.90.780.10 414 662 1.8E-29 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04965 c7d67f57d72200c2986db73fc711a7ab 662 SUPERFAMILY SSF56300 26 359 3.13E-73 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS04965 c7d67f57d72200c2986db73fc711a7ab 662 Gene3D G3DSA:3.60.21.10 18 396 4.8E-75 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS04965 c7d67f57d72200c2986db73fc711a7ab 662 Pfam PF02872 5'-nucleotidase, C-terminal domain 420 577 3.6E-21 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04965 c7d67f57d72200c2986db73fc711a7ab 662 PRINTS PR01607 Apyrase family signature 257 280 2.6E-22 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04965 c7d67f57d72200c2986db73fc711a7ab 662 PRINTS PR01607 Apyrase family signature 469 492 2.6E-22 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04965 c7d67f57d72200c2986db73fc711a7ab 662 PRINTS PR01607 Apyrase family signature 28 46 2.6E-22 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04965 c7d67f57d72200c2986db73fc711a7ab 662 PRINTS PR01607 Apyrase family signature 238 255 2.6E-22 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04965 c7d67f57d72200c2986db73fc711a7ab 662 PRINTS PR01607 Apyrase family signature 303 323 2.6E-22 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS04965 c7d67f57d72200c2986db73fc711a7ab 662 PRINTS PR01607 Apyrase family signature 551 570 2.6E-22 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CVS42_RS15485 671af7f2b70c1d8ca53a50e35842f918 322 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 312 2.3E-73 T 29-03-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 CVS42_RS15485 671af7f2b70c1d8ca53a50e35842f918 322 Pfam PF01699 Sodium/calcium exchanger protein 4 144 3.0E-23 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CVS42_RS15485 671af7f2b70c1d8ca53a50e35842f918 322 Pfam PF01699 Sodium/calcium exchanger protein 173 316 2.1E-31 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CVS42_RS20500 928c0ea84d80fc303a23c42a4f1ca4bb 81 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 4 80 1.0E-34 T 29-03-2018 IPR019620 Putative metal-binding protein CVS42_RS20500 928c0ea84d80fc303a23c42a4f1ca4bb 81 Pfam PF10678 Protein of unknown function (DUF2492) 3 79 1.2E-34 T 29-03-2018 IPR019620 Putative metal-binding protein CVS42_RS21380 c6d3d3d33acbc24c5fbd7936bf2af18e 481 Pfam PF13520 Amino acid permease 11 444 1.2E-32 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS21380 c6d3d3d33acbc24c5fbd7936bf2af18e 481 PIRSF PIRSF006060 1 474 1.6E-40 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS12935 717c89c7e14ee6629b9cfcc892cac5c9 334 SUPERFAMILY SSF51735 1 265 1.47E-48 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS12935 717c89c7e14ee6629b9cfcc892cac5c9 334 Pfam PF02719 Polysaccharide biosynthesis protein 7 279 2.5E-103 T 29-03-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CVS42_RS12935 717c89c7e14ee6629b9cfcc892cac5c9 334 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 327 2.7E-166 T 29-03-2018 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00010+4.2.1.11|KEGG: 00520+4.2.1.115|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6143|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 CVS42_RS12935 717c89c7e14ee6629b9cfcc892cac5c9 334 Gene3D G3DSA:3.40.50.720 1 330 1.6E-57 T 29-03-2018 CVS42_RS22085 5902eb107050d7c790b221d687edfc24 473 Gene3D G3DSA:3.30.565.10 307 473 4.6E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS22085 5902eb107050d7c790b221d687edfc24 473 Gene3D G3DSA:3.30.450.20 28 177 1.3E-24 T 29-03-2018 CVS42_RS22085 5902eb107050d7c790b221d687edfc24 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 472 3.2E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS22085 5902eb107050d7c790b221d687edfc24 473 SUPERFAMILY SSF103190 77 176 1.29E-10 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CVS42_RS22085 5902eb107050d7c790b221d687edfc24 473 SUPERFAMILY SSF55874 310 472 3.14E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS22085 5902eb107050d7c790b221d687edfc24 473 Gene3D G3DSA:1.10.287.130 232 306 1.6E-10 T 29-03-2018 CVS42_RS22085 5902eb107050d7c790b221d687edfc24 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 5.5E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS22085 5902eb107050d7c790b221d687edfc24 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 452 5.5E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS22085 5902eb107050d7c790b221d687edfc24 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 471 5.5E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS22085 5902eb107050d7c790b221d687edfc24 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 5.5E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS22085 5902eb107050d7c790b221d687edfc24 473 SMART SM00387 364 473 6.3E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS22085 5902eb107050d7c790b221d687edfc24 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 320 1.5E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS22085 5902eb107050d7c790b221d687edfc24 473 SMART SM00388 255 320 1.0E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS22085 5902eb107050d7c790b221d687edfc24 473 SUPERFAMILY SSF47384 254 321 2.35E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CVS42_RS18260 bef4f8ec8741764a4bb0c1b59ce06c0d 194 SMART SM00671 58 93 0.054 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS18260 bef4f8ec8741764a4bb0c1b59ce06c0d 194 SMART SM00671 94 129 0.0044 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS18260 bef4f8ec8741764a4bb0c1b59ce06c0d 194 SUPERFAMILY SSF81901 56 190 5.1E-19 T 29-03-2018 CVS42_RS18260 bef4f8ec8741764a4bb0c1b59ce06c0d 194 Gene3D G3DSA:2.60.40.1180 109 194 1.2E-11 T 29-03-2018 CVS42_RS18260 bef4f8ec8741764a4bb0c1b59ce06c0d 194 Gene3D G3DSA:2.60.40.1180 21 108 1.0E-10 T 29-03-2018 CVS42_RS18200 396da24abbe75bbeaf6b907c8ef9c727 175 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 157 37.018 T 29-03-2018 IPR022927 RNA pyrophosphohydrolase RppH CVS42_RS18200 396da24abbe75bbeaf6b907c8ef9c727 175 Pfam PF00293 NUDIX domain 7 147 4.1E-27 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CVS42_RS18200 396da24abbe75bbeaf6b907c8ef9c727 175 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CVS42_RS18200 396da24abbe75bbeaf6b907c8ef9c727 175 PRINTS PR00502 NUDIX hydrolase family signature 47 62 4.8E-8 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CVS42_RS18200 396da24abbe75bbeaf6b907c8ef9c727 175 PRINTS PR00502 NUDIX hydrolase family signature 33 47 4.8E-8 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CVS42_RS18200 396da24abbe75bbeaf6b907c8ef9c727 175 SUPERFAMILY SSF55811 7 155 8.12E-34 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CVS42_RS18200 396da24abbe75bbeaf6b907c8ef9c727 175 Gene3D G3DSA:3.90.79.10 1 162 7.3E-34 T 29-03-2018 CVS42_RS12565 239d20a7e869c22909eae07e686a304e 264 Pfam PF09836 Putative DNA-binding domain 38 96 8.9E-8 T 29-03-2018 IPR018640 Putative DNA-binding domain, bacteria CVS42_RS01790 5ccadfe74eb4a7339ccab0ee634abf18 169 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 1.1E-27 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CVS42_RS01790 5ccadfe74eb4a7339ccab0ee634abf18 169 Gene3D G3DSA:3.30.70.560 1 163 7.6E-43 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CVS42_RS01790 5ccadfe74eb4a7339ccab0ee634abf18 169 SUPERFAMILY SSF55083 1 153 6.41E-44 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CVS42_RS01790 5ccadfe74eb4a7339ccab0ee634abf18 169 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 85 96 - T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CVS42_RS01790 5ccadfe74eb4a7339ccab0ee634abf18 169 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 1.5E-24 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CVS42_RS09930 3e06cd76f1b5f7fb3b080abc0ec8525c 379 Gene3D G3DSA:3.40.50.300 2 195 4.7E-18 T 29-03-2018 CVS42_RS09930 3e06cd76f1b5f7fb3b080abc0ec8525c 379 SUPERFAMILY SSF52540 7 143 5.33E-7 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09930 3e06cd76f1b5f7fb3b080abc0ec8525c 379 Pfam PF05707 Zonular occludens toxin (Zot) 1 193 2.2E-30 T 29-03-2018 IPR008900 Zona occludens toxin CVS42_RS04060 06c7cc4b661a6b194dfa467740eab823 241 Gene3D G3DSA:3.40.50.880 1 231 2.9E-41 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS04060 06c7cc4b661a6b194dfa467740eab823 241 SUPERFAMILY SSF52317 1 206 5.89E-37 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS04060 06c7cc4b661a6b194dfa467740eab823 241 Pfam PF03575 Peptidase family S51 3 205 1.1E-46 T 29-03-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 CVS42_RS03670 cc4adc6cc71df3349eca739a04aec122 355 Gene3D G3DSA:3.20.20.210 1 355 4.6E-114 T 29-03-2018 CVS42_RS03670 cc4adc6cc71df3349eca739a04aec122 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CVS42_RS03670 cc4adc6cc71df3349eca739a04aec122 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.581 T 29-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CVS42_RS03670 cc4adc6cc71df3349eca739a04aec122 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 3.3E-138 T 29-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CVS42_RS03670 cc4adc6cc71df3349eca739a04aec122 355 SUPERFAMILY SSF51726 3 353 6.98E-126 T 29-03-2018 CVS42_RS03670 cc4adc6cc71df3349eca739a04aec122 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CVS42_RS03670 cc4adc6cc71df3349eca739a04aec122 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 8.6E-144 T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CVS42_RS06400 bc82c6001f26df7a3fc07e84c82a9f1b 151 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 28 146 2.6E-47 T 29-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CVS42_RS06400 bc82c6001f26df7a3fc07e84c82a9f1b 151 SUPERFAMILY SSF48695 35 147 1.13E-40 T 29-03-2018 IPR011031 Multihaem cytochrome CVS42_RS06400 bc82c6001f26df7a3fc07e84c82a9f1b 151 Gene3D G3DSA:1.10.1130.10 65 131 1.2E-26 T 29-03-2018 CVS42_RS06400 bc82c6001f26df7a3fc07e84c82a9f1b 151 PIRSF PIRSF006105 1 151 2.1E-48 T 29-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CVS42_RS01170 e7217a66f70b5d82c47a70edc413782c 145 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 145 17.506 T 29-03-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CVS42_RS01170 e7217a66f70b5d82c47a70edc413782c 145 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 29-03-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01170 e7217a66f70b5d82c47a70edc413782c 145 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 1.1E-26 T 29-03-2018 IPR021131 Ribosomal protein L18e/L15P CVS42_RS01170 e7217a66f70b5d82c47a70edc413782c 145 SUPERFAMILY SSF52080 4 144 3.79E-41 T 29-03-2018 IPR021131 Ribosomal protein L18e/L15P CVS42_RS01170 e7217a66f70b5d82c47a70edc413782c 145 Gene3D G3DSA:3.100.10.10 40 145 1.1E-20 T 29-03-2018 CVS42_RS01170 e7217a66f70b5d82c47a70edc413782c 145 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 1.5E-42 T 29-03-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17815 cd883d848ef4e10d74921bc40566f0ec 184 Pfam PF13302 Acetyltransferase (GNAT) domain 15 150 2.8E-22 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS17815 cd883d848ef4e10d74921bc40566f0ec 184 SUPERFAMILY SSF55729 7 175 2.16E-45 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS17815 cd883d848ef4e10d74921bc40566f0ec 184 Gene3D G3DSA:3.40.630.30 6 184 1.9E-32 T 29-03-2018 CVS42_RS21085 5ef0777c12f1cf8ff39d3e933a5d45db 458 SUPERFAMILY SSF116726 147 226 6.8E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS21085 5ef0777c12f1cf8ff39d3e933a5d45db 458 Gene3D G3DSA:3.30.70.1450 140 232 1.8E-14 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS21085 5ef0777c12f1cf8ff39d3e933a5d45db 458 Gene3D G3DSA:3.30.70.1450 367 458 1.7E-16 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS21085 5ef0777c12f1cf8ff39d3e933a5d45db 458 Gene3D G3DSA:3.40.50.720 233 366 2.6E-24 T 29-03-2018 CVS42_RS21085 5ef0777c12f1cf8ff39d3e933a5d45db 458 SUPERFAMILY SSF51735 232 376 1.68E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS21085 5ef0777c12f1cf8ff39d3e933a5d45db 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.0E-34 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CVS42_RS21085 5ef0777c12f1cf8ff39d3e933a5d45db 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.0E-34 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CVS42_RS21085 5ef0777c12f1cf8ff39d3e933a5d45db 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.0E-34 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CVS42_RS21085 5ef0777c12f1cf8ff39d3e933a5d45db 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.0E-34 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CVS42_RS21085 5ef0777c12f1cf8ff39d3e933a5d45db 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.0E-34 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CVS42_RS21085 5ef0777c12f1cf8ff39d3e933a5d45db 458 SUPERFAMILY SSF116726 390 451 1.44E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS21085 5ef0777c12f1cf8ff39d3e933a5d45db 458 SUPERFAMILY SSF51735 1 152 3.63E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS21085 5ef0777c12f1cf8ff39d3e933a5d45db 458 Gene3D G3DSA:3.40.50.720 2 139 2.9E-26 T 29-03-2018 CVS42_RS21085 5ef0777c12f1cf8ff39d3e933a5d45db 458 Pfam PF02254 TrkA-N domain 235 350 9.6E-26 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CVS42_RS21085 5ef0777c12f1cf8ff39d3e933a5d45db 458 Pfam PF02254 TrkA-N domain 3 106 3.3E-29 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CVS42_RS21085 5ef0777c12f1cf8ff39d3e933a5d45db 458 Pfam PF02080 TrkA-C domain 156 225 3.8E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS21085 5ef0777c12f1cf8ff39d3e933a5d45db 458 Pfam PF02080 TrkA-C domain 391 451 8.0E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS11965 877376b43d04b0075e4dff7013bea63a 339 Gene3D G3DSA:3.40.640.10 1 246 1.3E-41 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS11965 877376b43d04b0075e4dff7013bea63a 339 Pfam PF01212 Beta-eliminating lyase 5 286 6.3E-94 T 29-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 CVS42_RS11965 877376b43d04b0075e4dff7013bea63a 339 PIRSF PIRSF017617 1 339 4.6E-132 T 29-03-2018 IPR023603 Threonine aldolase CVS42_RS11965 877376b43d04b0075e4dff7013bea63a 339 Gene3D G3DSA:3.90.1150.10 247 338 2.4E-23 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS11965 877376b43d04b0075e4dff7013bea63a 339 SUPERFAMILY SSF53383 3 336 1.86E-113 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS00110 585e647d48ef1aecd1c31d2936be936b 274 Gene3D G3DSA:3.90.1240.10 179 223 5.0E-8 T 29-03-2018 CVS42_RS00110 585e647d48ef1aecd1c31d2936be936b 274 SMART SM00342 170 252 1.8E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS00110 585e647d48ef1aecd1c31d2936be936b 274 SUPERFAMILY SSF46689 206 253 8.06E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS00110 585e647d48ef1aecd1c31d2936be936b 274 Gene3D G3DSA:1.10.10.60 224 257 1.8E-10 T 29-03-2018 CVS42_RS00110 585e647d48ef1aecd1c31d2936be936b 274 Pfam PF12833 Helix-turn-helix domain 176 252 4.0E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS00110 585e647d48ef1aecd1c31d2936be936b 274 Gene3D G3DSA:2.60.120.10 13 178 4.0E-9 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS00110 585e647d48ef1aecd1c31d2936be936b 274 SUPERFAMILY SSF51182 30 170 2.54E-14 T 29-03-2018 IPR011051 RmlC-like cupin domain CVS42_RS12590 34e21087732bfae19f1ae511a044fb7d 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 361 9.2E-85 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CVS42_RS12590 34e21087732bfae19f1ae511a044fb7d 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 1.2E-114 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CVS42_RS12590 34e21087732bfae19f1ae511a044fb7d 379 PIRSF PIRSF000267 1 378 1.3E-105 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CVS42_RS15830 747ba5884a13d636506fdd03c04d8d4c 470 PIRSF PIRSF006603 1 453 2.4E-50 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS15830 747ba5884a13d636506fdd03c04d8d4c 470 Pfam PF01554 MatE 22 185 1.4E-23 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS15830 747ba5884a13d636506fdd03c04d8d4c 470 Pfam PF01554 MatE 246 408 1.8E-12 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS17830 b9ccb969d46f7bdec5a91c7c4dee87a6 398 Pfam PF07690 Major Facilitator Superfamily 18 309 3.2E-30 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS17830 b9ccb969d46f7bdec5a91c7c4dee87a6 398 Gene3D G3DSA:1.20.1250.20 197 396 2.7E-19 T 29-03-2018 CVS42_RS17830 b9ccb969d46f7bdec5a91c7c4dee87a6 398 Gene3D G3DSA:1.20.1250.20 1 192 2.1E-25 T 29-03-2018 CVS42_RS17830 b9ccb969d46f7bdec5a91c7c4dee87a6 398 SUPERFAMILY SSF103473 11 389 3.92E-48 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS17830 b9ccb969d46f7bdec5a91c7c4dee87a6 398 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 396 37.296 T 29-03-2018 IPR022855 Multidrug resistance protein MdtH CVS42_RS09570 355200d053b25948922a87806ba527da 231 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 12 222 3.6E-49 T 29-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CVS42_RS09570 355200d053b25948922a87806ba527da 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 187 2.9E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS09570 355200d053b25948922a87806ba527da 231 Gene3D G3DSA:3.40.50.1000 83 231 7.6E-32 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS09570 355200d053b25948922a87806ba527da 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 4.9E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS09570 355200d053b25948922a87806ba527da 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 4.9E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS09570 355200d053b25948922a87806ba527da 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 4.9E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS09570 355200d053b25948922a87806ba527da 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 4.9E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS09570 355200d053b25948922a87806ba527da 231 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 190 1.4E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CVS42_RS09570 355200d053b25948922a87806ba527da 231 SUPERFAMILY SSF56784 9 223 4.8E-54 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS09570 355200d053b25948922a87806ba527da 231 Gene3D G3DSA:1.10.150.240 24 82 5.0E-12 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CVS42_RS09570 355200d053b25948922a87806ba527da 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 192 1.4E-30 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS15100 ce9f21a5ca81e42a42805e206b912cbf 402 Pfam PF00589 Phage integrase family 232 376 1.5E-17 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS15100 ce9f21a5ca81e42a42805e206b912cbf 402 Pfam PF13356 Arm DNA-binding domain 4 87 1.1E-9 T 29-03-2018 IPR025166 Integrase, DNA-binding domain CVS42_RS15100 ce9f21a5ca81e42a42805e206b912cbf 402 Gene3D G3DSA:1.10.150.130 89 212 1.6E-16 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CVS42_RS15100 ce9f21a5ca81e42a42805e206b912cbf 402 Gene3D G3DSA:1.10.443.10 213 388 1.7E-22 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS15100 ce9f21a5ca81e42a42805e206b912cbf 402 SUPERFAMILY SSF56349 100 388 1.91E-51 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CVS42_RS02060 8ddd5ec54ab34a1bf4ccf4c1f2a1be4d 265 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 19 256 8.7E-79 T 29-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 CVS42_RS02060 8ddd5ec54ab34a1bf4ccf4c1f2a1be4d 265 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 16 257 32.309 T 29-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 CVS42_RS02060 8ddd5ec54ab34a1bf4ccf4c1f2a1be4d 265 Pfam PF12697 Alpha/beta hydrolase family 20 250 6.4E-19 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS02060 8ddd5ec54ab34a1bf4ccf4c1f2a1be4d 265 Gene3D G3DSA:3.40.50.1820 9 258 1.1E-42 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS02060 8ddd5ec54ab34a1bf4ccf4c1f2a1be4d 265 SUPERFAMILY SSF53474 4 258 5.99E-44 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS00080 51a05b496daf1bd8f83b2e2328250418 319 Pfam PF01965 DJ-1/PfpI family 88 172 7.2E-7 T 29-03-2018 IPR002818 DJ-1/PfpI CVS42_RS00080 51a05b496daf1bd8f83b2e2328250418 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 265 307 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CVS42_RS00080 51a05b496daf1bd8f83b2e2328250418 319 Pfam PF12833 Helix-turn-helix domain 234 312 4.8E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS00080 51a05b496daf1bd8f83b2e2328250418 319 SUPERFAMILY SSF52317 6 193 2.78E-40 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS00080 51a05b496daf1bd8f83b2e2328250418 319 Gene3D G3DSA:1.10.10.60 211 266 1.7E-13 T 29-03-2018 CVS42_RS00080 51a05b496daf1bd8f83b2e2328250418 319 SMART SM00342 228 311 1.5E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS00080 51a05b496daf1bd8f83b2e2328250418 319 Gene3D G3DSA:3.40.50.880 2 210 1.2E-49 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS00080 51a05b496daf1bd8f83b2e2328250418 319 SUPERFAMILY SSF46689 265 315 3.7E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS00080 51a05b496daf1bd8f83b2e2328250418 319 SUPERFAMILY SSF46689 212 261 2.58E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS00080 51a05b496daf1bd8f83b2e2328250418 319 Gene3D G3DSA:1.10.10.60 267 319 4.8E-11 T 29-03-2018 CVS42_RS21965 5376bb01df29fcde54b866d9228b3aec 251 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 224 7.7E-77 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CVS42_RS21965 5376bb01df29fcde54b866d9228b3aec 251 Pfam PF00902 Sec-independent protein translocase protein (TatC) 11 220 1.1E-65 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CVS42_RS21965 5376bb01df29fcde54b866d9228b3aec 251 ProSitePatterns PS01218 TatC family signature. 153 172 - T 29-03-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site CVS42_RS21965 5376bb01df29fcde54b866d9228b3aec 251 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 239 18.408 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CVS42_RS21965 5376bb01df29fcde54b866d9228b3aec 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 102 128 8.2E-51 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CVS42_RS21965 5376bb01df29fcde54b866d9228b3aec 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 153 181 8.2E-51 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CVS42_RS21965 5376bb01df29fcde54b866d9228b3aec 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 84 102 8.2E-51 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CVS42_RS21965 5376bb01df29fcde54b866d9228b3aec 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 8.2E-51 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CVS42_RS10540 2b09c364bbfaff1d17ecf896e5cb2803 199 SUPERFAMILY SSF54862 2 184 1.58E-42 T 29-03-2018 CVS42_RS10540 2b09c364bbfaff1d17ecf896e5cb2803 199 Gene3D G3DSA:3.30.70.20 21 80 1.6E-7 T 29-03-2018 CVS42_RS10540 2b09c364bbfaff1d17ecf896e5cb2803 199 Gene3D G3DSA:3.30.70.20 81 112 5.8E-9 T 29-03-2018 CVS42_RS10540 2b09c364bbfaff1d17ecf896e5cb2803 199 Gene3D G3DSA:3.30.70.20 1 20 0.001 T 29-03-2018 CVS42_RS10540 2b09c364bbfaff1d17ecf896e5cb2803 199 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 106 117 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS10540 2b09c364bbfaff1d17ecf896e5cb2803 199 Gene3D G3DSA:3.30.70.20 113 197 3.3E-17 T 29-03-2018 CVS42_RS10540 2b09c364bbfaff1d17ecf896e5cb2803 199 Pfam PF12838 4Fe-4S dicluster domain 105 168 2.0E-9 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS21040 32b094627318e595e514dccae36e7cd4 186 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 2 184 40.85 T 29-03-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 CVS42_RS21040 32b094627318e595e514dccae36e7cd4 186 Gene3D G3DSA:3.90.870.10 1 184 2.8E-53 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CVS42_RS21040 32b094627318e595e514dccae36e7cd4 186 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 5 177 1.2E-36 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 CVS42_RS21040 32b094627318e595e514dccae36e7cd4 186 SUPERFAMILY SSF55821 3 183 7.02E-54 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CVS42_RS21040 32b094627318e595e514dccae36e7cd4 186 Pfam PF01300 Telomere recombination 11 184 7.0E-44 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 CVS42_RS07565 39f11db3f0751820c71f919299f9b04a 111 Pfam PF02699 Preprotein translocase subunit 23 100 1.7E-25 T 29-03-2018 IPR003849 Preprotein translocase YajC CVS42_RS07565 39f11db3f0751820c71f919299f9b04a 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 7.3E-15 T 29-03-2018 IPR003849 Preprotein translocase YajC CVS42_RS07565 39f11db3f0751820c71f919299f9b04a 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 7.3E-15 T 29-03-2018 IPR003849 Preprotein translocase YajC CVS42_RS07565 39f11db3f0751820c71f919299f9b04a 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 103 1.5E-30 T 29-03-2018 IPR003849 Preprotein translocase YajC CVS42_RS07565 39f11db3f0751820c71f919299f9b04a 111 SMART SM01323 19 103 1.8E-37 T 29-03-2018 IPR003849 Preprotein translocase YajC CVS42_RS12725 b034b3c86363f8c02c19105e041a72b3 383 Pfam PF07759 Protein of unknown function (DUF1615) 63 377 1.6E-142 T 29-03-2018 IPR011673 Protein of unknown function DUF1615 CVS42_RS12725 b034b3c86363f8c02c19105e041a72b3 383 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 48 376 9.0E-127 T 29-03-2018 IPR011673 Protein of unknown function DUF1615 CVS42_RS14130 a1142bc7017f0e2a6054e83f4bd78530 375 Pfam PF07687 Peptidase dimerisation domain 175 282 1.2E-24 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CVS42_RS14130 a1142bc7017f0e2a6054e83f4bd78530 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 5.1E-42 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CVS42_RS14130 a1142bc7017f0e2a6054e83f4bd78530 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 52.937 T 29-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CVS42_RS14130 a1142bc7017f0e2a6054e83f4bd78530 375 Gene3D G3DSA:3.40.630.10 302 373 3.9E-4 T 29-03-2018 CVS42_RS14130 a1142bc7017f0e2a6054e83f4bd78530 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 373 8.7E-175 T 29-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CVS42_RS14130 a1142bc7017f0e2a6054e83f4bd78530 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 135 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CVS42_RS14130 a1142bc7017f0e2a6054e83f4bd78530 375 SUPERFAMILY SSF55031 179 288 4.04E-29 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CVS42_RS14130 a1142bc7017f0e2a6054e83f4bd78530 375 SUPERFAMILY SSF53187 2 178 4.19E-65 T 29-03-2018 CVS42_RS14130 a1142bc7017f0e2a6054e83f4bd78530 375 SUPERFAMILY SSF53187 292 374 4.19E-65 T 29-03-2018 CVS42_RS14130 a1142bc7017f0e2a6054e83f4bd78530 375 Gene3D G3DSA:3.40.630.10 1 280 1.7E-58 T 29-03-2018 CVS42_RS01000 e9765646a30c1558b21fb55399750471 143 Gene3D G3DSA:3.40.250.10 23 143 5.7E-27 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS01000 e9765646a30c1558b21fb55399750471 143 SMART SM00450 40 138 5.4E-23 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS01000 e9765646a30c1558b21fb55399750471 143 SUPERFAMILY SSF52821 20 141 7.73E-32 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS01000 e9765646a30c1558b21fb55399750471 143 Pfam PF00581 Rhodanese-like domain 48 134 4.4E-17 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS06375 9ec00c26c30331386bde052a66dbdd05 180 SUPERFAMILY SSF54862 25 161 3.07E-20 T 29-03-2018 CVS42_RS06375 9ec00c26c30331386bde052a66dbdd05 180 Gene3D G3DSA:3.30.70.20 116 144 1.7E-8 T 29-03-2018 CVS42_RS06375 9ec00c26c30331386bde052a66dbdd05 180 Gene3D G3DSA:3.30.70.20 48 74 3.2E-9 T 29-03-2018 CVS42_RS06375 9ec00c26c30331386bde052a66dbdd05 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS06375 9ec00c26c30331386bde052a66dbdd05 180 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 9 158 1.8E-43 T 29-03-2018 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055|GO:0055114 CVS42_RS06375 9ec00c26c30331386bde052a66dbdd05 180 Gene3D G3DSA:3.30.70.20 75 115 1.6E-4 T 29-03-2018 CVS42_RS06375 9ec00c26c30331386bde052a66dbdd05 180 Pfam PF13187 4Fe-4S dicluster domain 38 82 5.4E-7 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS06375 9ec00c26c30331386bde052a66dbdd05 180 Gene3D G3DSA:1.10.1060.10 10 47 0.0014 T 29-03-2018 CVS42_RS06375 9ec00c26c30331386bde052a66dbdd05 180 Gene3D G3DSA:3.30.70.20 145 179 1.6E-6 T 29-03-2018 CVS42_RS06375 9ec00c26c30331386bde052a66dbdd05 180 Pfam PF12838 4Fe-4S dicluster domain 112 156 2.5E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS16740 c6beb81848a9f5cc55089b09dd54bba4 137 Pfam PF01029 NusB family 7 132 9.9E-36 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CVS42_RS16740 c6beb81848a9f5cc55089b09dd54bba4 137 SUPERFAMILY SSF48013 3 135 5.36E-44 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CVS42_RS16740 c6beb81848a9f5cc55089b09dd54bba4 137 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 5 133 4.3E-44 T 29-03-2018 IPR011605 NusB antitermination factor GO:0006353 CVS42_RS16740 c6beb81848a9f5cc55089b09dd54bba4 137 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 23.097 T 29-03-2018 IPR011605 NusB antitermination factor GO:0006353 CVS42_RS16740 c6beb81848a9f5cc55089b09dd54bba4 137 Gene3D G3DSA:1.10.940.10 1 137 2.4E-42 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CVS42_RS12950 8151bcd2f3531ad2d1ec7e29042dd848 110 SUPERFAMILY SSF56235 7 109 1.2E-29 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS12950 8151bcd2f3531ad2d1ec7e29042dd848 110 Pfam PF13522 Glutamine amidotransferase domain 18 108 2.8E-24 T 29-03-2018 CVS42_RS12950 8151bcd2f3531ad2d1ec7e29042dd848 110 Gene3D G3DSA:3.60.20.10 3 109 7.9E-25 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS18560 1b2d337b185c956c560a90fb676a71a7 365 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 8 359 2.9E-115 T 29-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 CVS42_RS18560 1b2d337b185c956c560a90fb676a71a7 365 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 359 3.3E-96 T 29-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 CVS42_RS18560 1b2d337b185c956c560a90fb676a71a7 365 Gene3D G3DSA:3.40.50.2000 7 202 2.3E-61 T 29-03-2018 CVS42_RS18560 1b2d337b185c956c560a90fb676a71a7 365 SUPERFAMILY SSF53756 6 362 3.92E-105 T 29-03-2018 CVS42_RS18560 1b2d337b185c956c560a90fb676a71a7 365 Gene3D G3DSA:3.40.50.2000 203 342 8.9E-25 T 29-03-2018 CVS42_RS04035 51a3e2d1696f465d6c6c46d2377c04dc 286 SUPERFAMILY SSF54427 163 285 2.05E-22 T 29-03-2018 IPR032710 NTF2-like domain CVS42_RS04035 51a3e2d1696f465d6c6c46d2377c04dc 286 Pfam PF04280 Tim44-like domain 164 285 2.3E-19 T 29-03-2018 IPR007379 Tim44-like domain CVS42_RS04035 51a3e2d1696f465d6c6c46d2377c04dc 286 SMART SM00978 156 285 2.5E-36 T 29-03-2018 IPR007379 Tim44-like domain CVS42_RS19020 27640c09f526461e0ecb53feff469cdb 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 27 40 1.0E-53 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS19020 27640c09f526461e0ecb53feff469cdb 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 180 197 1.0E-53 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS19020 27640c09f526461e0ecb53feff469cdb 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 231 245 1.0E-53 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS19020 27640c09f526461e0ecb53feff469cdb 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 150 168 1.0E-53 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS19020 27640c09f526461e0ecb53feff469cdb 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 64 83 1.0E-53 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS19020 27640c09f526461e0ecb53feff469cdb 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 131 147 1.0E-53 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS19020 27640c09f526461e0ecb53feff469cdb 691 PIRSF PIRSF005419 2 691 2.2E-232 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS19020 27640c09f526461e0ecb53feff469cdb 691 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 12 689 1.8E-241 T 29-03-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 CVS42_RS19020 27640c09f526461e0ecb53feff469cdb 691 Pfam PF00771 FHIPEP family 20 682 1.3E-245 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS19020 27640c09f526461e0ecb53feff469cdb 691 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 136 159 - T 29-03-2018 IPR025505 FHIPEP conserved site CVS42_RS04775 a3d6214518ad06794dac1eca2cb485cf 172 Gene3D G3DSA:3.40.50.300 1 171 5.1E-35 T 29-03-2018 CVS42_RS04775 a3d6214518ad06794dac1eca2cb485cf 172 Pfam PF01202 Shikimate kinase 13 169 1.2E-54 T 29-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CVS42_RS04775 a3d6214518ad06794dac1eca2cb485cf 172 SUPERFAMILY SSF52540 4 170 4.97E-33 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS04775 a3d6214518ad06794dac1eca2cb485cf 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 29-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CVS42_RS04775 a3d6214518ad06794dac1eca2cb485cf 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 28.361 T 29-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CVS42_RS04775 a3d6214518ad06794dac1eca2cb485cf 172 PRINTS PR01100 Shikimate kinase family signature 98 115 4.7E-28 T 29-03-2018 CVS42_RS04775 a3d6214518ad06794dac1eca2cb485cf 172 PRINTS PR01100 Shikimate kinase family signature 59 67 4.7E-28 T 29-03-2018 CVS42_RS04775 a3d6214518ad06794dac1eca2cb485cf 172 PRINTS PR01100 Shikimate kinase family signature 7 22 4.7E-28 T 29-03-2018 CVS42_RS04775 a3d6214518ad06794dac1eca2cb485cf 172 PRINTS PR01100 Shikimate kinase family signature 31 44 4.7E-28 T 29-03-2018 CVS42_RS04775 a3d6214518ad06794dac1eca2cb485cf 172 PRINTS PR01100 Shikimate kinase family signature 77 86 4.7E-28 T 29-03-2018 CVS42_RS06750 bbba91fb3ed8868c800e6146f13c4deb 244 Pfam PF08241 Methyltransferase domain 83 129 1.1E-7 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CVS42_RS06750 bbba91fb3ed8868c800e6146f13c4deb 244 Gene3D G3DSA:3.40.50.150 63 220 7.6E-17 T 29-03-2018 CVS42_RS06750 bbba91fb3ed8868c800e6146f13c4deb 244 SUPERFAMILY SSF53335 82 195 1.93E-16 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS05610 722e01ab49ff451506fb30b3a9c86fc4 246 Pfam PF01578 Cytochrome C assembly protein 27 184 4.0E-32 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CVS42_RS05610 722e01ab49ff451506fb30b3a9c86fc4 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 2.1E-61 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05610 722e01ab49ff451506fb30b3a9c86fc4 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 2.1E-61 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05610 722e01ab49ff451506fb30b3a9c86fc4 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 2.1E-61 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05610 722e01ab49ff451506fb30b3a9c86fc4 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 2.1E-61 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05610 722e01ab49ff451506fb30b3a9c86fc4 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 2.1E-61 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05610 722e01ab49ff451506fb30b3a9c86fc4 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 2.1E-61 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05610 722e01ab49ff451506fb30b3a9c86fc4 246 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 227 2.9E-81 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS04545 e38dc1d090a24f76df0618c2bb42383a 200 SUPERFAMILY SSF55469 4 199 1.7E-70 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CVS42_RS04545 e38dc1d090a24f76df0618c2bb42383a 200 Pfam PF00881 Nitroreductase family 9 178 8.6E-15 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CVS42_RS04545 e38dc1d090a24f76df0618c2bb42383a 200 Gene3D G3DSA:3.40.109.10 4 197 1.8E-24 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CVS42_RS14110 81b055f73e8cb97c1e85bea707a0895e 379 Pfam PF01546 Peptidase family M20/M25/M40 78 374 4.0E-25 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CVS42_RS14110 81b055f73e8cb97c1e85bea707a0895e 379 SUPERFAMILY SSF53187 303 378 4.98E-43 T 29-03-2018 CVS42_RS14110 81b055f73e8cb97c1e85bea707a0895e 379 SUPERFAMILY SSF53187 8 191 4.98E-43 T 29-03-2018 CVS42_RS14110 81b055f73e8cb97c1e85bea707a0895e 379 PIRSF PIRSF037238 1 378 9.6E-134 T 29-03-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase CVS42_RS14110 81b055f73e8cb97c1e85bea707a0895e 379 Pfam PF07687 Peptidase dimerisation domain 180 277 4.1E-20 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CVS42_RS14110 81b055f73e8cb97c1e85bea707a0895e 379 Gene3D G3DSA:3.40.630.10 10 379 7.4E-51 T 29-03-2018 CVS42_RS14110 81b055f73e8cb97c1e85bea707a0895e 379 SUPERFAMILY SSF55031 182 289 3.93E-24 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CVS42_RS14110 81b055f73e8cb97c1e85bea707a0895e 379 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 77 86 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CVS42_RS00480 ae4ea8709f84e1614d1d0dd7e0df9062 353 Pfam PF13439 Glycosyltransferase Family 4 18 176 2.1E-10 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CVS42_RS00480 ae4ea8709f84e1614d1d0dd7e0df9062 353 SUPERFAMILY SSF53756 8 329 9.94E-48 T 29-03-2018 CVS42_RS00480 ae4ea8709f84e1614d1d0dd7e0df9062 353 Gene3D G3DSA:3.40.50.2000 181 332 3.1E-23 T 29-03-2018 CVS42_RS00480 ae4ea8709f84e1614d1d0dd7e0df9062 353 Pfam PF00534 Glycosyl transferases group 1 191 303 1.7E-21 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CVS42_RS00480 ae4ea8709f84e1614d1d0dd7e0df9062 353 Gene3D G3DSA:3.40.50.2000 4 180 9.4E-5 T 29-03-2018 CVS42_RS03180 4838503ed1fb903cd7c43f78ed2e2aa1 116 SUPERFAMILY SSF54909 5 86 6.6E-20 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CVS42_RS03180 4838503ed1fb903cd7c43f78ed2e2aa1 116 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 85 8.8E-13 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CVS42_RS03180 4838503ed1fb903cd7c43f78ed2e2aa1 116 Gene3D G3DSA:3.30.70.100 1 102 4.4E-16 T 29-03-2018 CVS42_RS12940 0aef95182e4c852ec5e429c6bab3103b 377 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 375 2.8E-165 T 29-03-2018 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase CVS42_RS12940 0aef95182e4c852ec5e429c6bab3103b 377 SUPERFAMILY SSF53383 2 374 7.17E-105 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS12940 0aef95182e4c852ec5e429c6bab3103b 377 Gene3D G3DSA:3.90.1150.10 253 376 1.7E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS12940 0aef95182e4c852ec5e429c6bab3103b 377 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 366 1.8E-103 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CVS42_RS12940 0aef95182e4c852ec5e429c6bab3103b 377 PIRSF PIRSF000390 1 377 6.5E-104 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CVS42_RS12940 0aef95182e4c852ec5e429c6bab3103b 377 Gene3D G3DSA:3.40.640.10 2 252 4.4E-51 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS21270 0da96c78686eb9b2bd0faa799973c5f4 299 Gene3D G3DSA:3.40.1130.10 47 256 6.0E-22 T 29-03-2018 CVS42_RS21270 0da96c78686eb9b2bd0faa799973c5f4 299 Pfam PF01553 Acyltransferase 77 230 4.8E-14 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CVS42_RS21270 0da96c78686eb9b2bd0faa799973c5f4 299 SUPERFAMILY SSF69593 22 289 2.75E-33 T 29-03-2018 CVS42_RS21270 0da96c78686eb9b2bd0faa799973c5f4 299 SMART SM00563 89 231 2.8E-21 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CVS42_RS15970 24fbeb1f623400b7141a20998b5dd9e0 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 5.1E-59 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS15970 24fbeb1f623400b7141a20998b5dd9e0 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 5.1E-59 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS15970 24fbeb1f623400b7141a20998b5dd9e0 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 5.1E-59 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS15970 24fbeb1f623400b7141a20998b5dd9e0 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 5.1E-59 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS15970 24fbeb1f623400b7141a20998b5dd9e0 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 5.1E-59 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS15970 24fbeb1f623400b7141a20998b5dd9e0 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 5.1E-59 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS15970 24fbeb1f623400b7141a20998b5dd9e0 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 7.5E-162 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS15970 24fbeb1f623400b7141a20998b5dd9e0 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS15970 24fbeb1f623400b7141a20998b5dd9e0 476 Pfam PF01235 Sodium:alanine symporter family 48 452 1.8E-161 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS04180 f82b72c3dcf70ddecb07de7350953a7d 1012 Gene3D G3DSA:2.60.40.10 807 899 7.4E-10 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS04180 f82b72c3dcf70ddecb07de7350953a7d 1012 Gene3D G3DSA:2.10.10.20 912 963 3.0E-15 T 29-03-2018 CVS42_RS04180 f82b72c3dcf70ddecb07de7350953a7d 1012 Gene3D G3DSA:2.10.10.20 966 1009 4.9E-12 T 29-03-2018 CVS42_RS04180 f82b72c3dcf70ddecb07de7350953a7d 1012 SUPERFAMILY SSF51055 966 1007 1.29E-11 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04180 f82b72c3dcf70ddecb07de7350953a7d 1012 Pfam PF02839 Carbohydrate binding domain 981 1003 7.4E-5 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04180 f82b72c3dcf70ddecb07de7350953a7d 1012 SMART SM00495 964 1006 6.7E-10 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04180 f82b72c3dcf70ddecb07de7350953a7d 1012 SMART SM00495 917 960 4.8E-15 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS04180 f82b72c3dcf70ddecb07de7350953a7d 1012 Pfam PF10462 Peptidase M66 254 554 2.7E-85 T 29-03-2018 IPR019503 Peptidase M66 domain GO:0004222 CVS42_RS04180 f82b72c3dcf70ddecb07de7350953a7d 1012 SUPERFAMILY SSF51055 908 961 1.24E-13 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS01715 1b3bb20858015caf55cf3b6e579c06ca 290 SUPERFAMILY SSF56349 23 258 2.15E-47 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CVS42_RS01715 1b3bb20858015caf55cf3b6e579c06ca 290 Gene3D G3DSA:1.10.443.10 125 264 7.0E-29 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS01715 1b3bb20858015caf55cf3b6e579c06ca 290 Gene3D G3DSA:1.10.150.130 18 124 1.6E-16 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CVS42_RS01715 1b3bb20858015caf55cf3b6e579c06ca 290 Pfam PF00589 Phage integrase family 123 258 2.2E-19 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS16855 df2332d824da88e00ff3dac9b36f98eb 446 SUPERFAMILY SSF51246 331 443 3.51E-43 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CVS42_RS16855 df2332d824da88e00ff3dac9b36f98eb 446 Gene3D G3DSA:3.30.1490.20 124 210 4.1E-21 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CVS42_RS16855 df2332d824da88e00ff3dac9b36f98eb 446 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 3.0E-239 T 29-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CVS42_RS16855 df2332d824da88e00ff3dac9b36f98eb 446 SUPERFAMILY SSF56059 83 345 1.22E-70 T 29-03-2018 CVS42_RS16855 df2332d824da88e00ff3dac9b36f98eb 446 SMART SM00878 336 441 1.0E-63 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CVS42_RS16855 df2332d824da88e00ff3dac9b36f98eb 446 Gene3D G3DSA:3.40.50.20 1 123 8.3E-51 T 29-03-2018 CVS42_RS16855 df2332d824da88e00ff3dac9b36f98eb 446 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.4E-43 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CVS42_RS16855 df2332d824da88e00ff3dac9b36f98eb 446 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CVS42_RS16855 df2332d824da88e00ff3dac9b36f98eb 446 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CVS42_RS16855 df2332d824da88e00ff3dac9b36f98eb 446 SUPERFAMILY SSF52440 1 113 1.22E-45 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CVS42_RS16855 df2332d824da88e00ff3dac9b36f98eb 446 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 2.4E-83 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CVS42_RS16855 df2332d824da88e00ff3dac9b36f98eb 446 Gene3D G3DSA:3.30.470.20 211 444 1.4E-98 T 29-03-2018 CVS42_RS16855 df2332d824da88e00ff3dac9b36f98eb 446 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 4.5E-38 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CVS42_RS20510 72e0b30bceda1f400c2b4958fcb0f5b1 104 Gene3D G3DSA:4.10.1060.10 68 104 3.9E-4 T 29-03-2018 CVS42_RS20510 72e0b30bceda1f400c2b4958fcb0f5b1 104 Pfam PF09413 Putative prokaryotic signal transducing protein 4 70 2.1E-14 T 29-03-2018 IPR018551 Domain of unknown function DUF2007 CVS42_RS20510 72e0b30bceda1f400c2b4958fcb0f5b1 104 SUPERFAMILY SSF54913 6 71 4.22E-5 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CVS42_RS20510 72e0b30bceda1f400c2b4958fcb0f5b1 104 Gene3D G3DSA:3.30.70.790 5 67 8.9E-15 T 29-03-2018 CVS42_RS21565 052fbe31a270e45469826a438a7a813b 344 SUPERFAMILY SSF53756 1 340 8.72E-100 T 29-03-2018 CVS42_RS21565 052fbe31a270e45469826a438a7a813b 344 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 341 8.3E-149 T 29-03-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 CVS42_RS21565 052fbe31a270e45469826a438a7a813b 344 Gene3D G3DSA:3.40.50.2000 160 344 9.8E-46 T 29-03-2018 CVS42_RS21565 052fbe31a270e45469826a438a7a813b 344 Gene3D G3DSA:3.40.50.2000 1 150 7.0E-33 T 29-03-2018 CVS42_RS21565 052fbe31a270e45469826a438a7a813b 344 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 322 4.1E-72 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CVS42_RS19175 1bd4532ba2d4261091679837937f54e3 246 Pfam PF07071 KDGP aldolase 8 224 2.6E-110 T 29-03-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CVS42_RS19175 1bd4532ba2d4261091679837937f54e3 246 Gene3D G3DSA:3.20.20.70 4 245 8.4E-118 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS19175 1bd4532ba2d4261091679837937f54e3 246 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 8 242 1.3E-120 T 29-03-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CVS42_RS19175 1bd4532ba2d4261091679837937f54e3 246 SUPERFAMILY SSF51569 80 208 2.86E-5 T 29-03-2018 CVS42_RS18165 ddce8252641a5a1d3a32722aa2f04521 100 SUPERFAMILY SSF46785 7 96 7.87E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18165 ddce8252641a5a1d3a32722aa2f04521 100 Gene3D G3DSA:1.10.10.10 6 100 6.6E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18165 ddce8252641a5a1d3a32722aa2f04521 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 4.8E-13 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CVS42_RS18165 ddce8252641a5a1d3a32722aa2f04521 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 4.8E-13 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CVS42_RS18165 ddce8252641a5a1d3a32722aa2f04521 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 4.8E-13 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CVS42_RS18165 ddce8252641a5a1d3a32722aa2f04521 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 4.8E-13 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CVS42_RS18165 ddce8252641a5a1d3a32722aa2f04521 100 Pfam PF01022 Bacterial regulatory protein, arsR family 23 66 4.8E-13 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CVS42_RS18165 ddce8252641a5a1d3a32722aa2f04521 100 SMART SM00418 15 93 7.5E-26 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CVS42_RS08625 413b52ad80348592d8442e5bcc2be8ae 468 Gene3D G3DSA:3.50.50.60 17 441 1.3E-35 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS08625 413b52ad80348592d8442e5bcc2be8ae 468 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 5 468 3.6E-251 T 29-03-2018 IPR017715 Putative aminophosphonate oxidoreductase CVS42_RS08625 413b52ad80348592d8442e5bcc2be8ae 468 SUPERFAMILY SSF51905 355 408 2.59E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS08625 413b52ad80348592d8442e5bcc2be8ae 468 SUPERFAMILY SSF51905 29 254 2.59E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS08625 413b52ad80348592d8442e5bcc2be8ae 468 Pfam PF01266 FAD dependent oxidoreductase 30 394 1.2E-53 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CVS42_RS13040 321378ce18bbacc06f919ee629a0a164 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 5.2E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13040 321378ce18bbacc06f919ee629a0a164 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 5.2E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13040 321378ce18bbacc06f919ee629a0a164 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.2E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13040 321378ce18bbacc06f919ee629a0a164 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 5.2E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13040 321378ce18bbacc06f919ee629a0a164 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 5.2E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13040 321378ce18bbacc06f919ee629a0a164 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 5.2E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13040 321378ce18bbacc06f919ee629a0a164 249 Gene3D G3DSA:3.40.50.720 47 249 2.4E-63 T 29-03-2018 CVS42_RS13040 321378ce18bbacc06f919ee629a0a164 249 Gene3D G3DSA:3.40.50.720 2 46 3.8E-9 T 29-03-2018 CVS42_RS13040 321378ce18bbacc06f919ee629a0a164 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.8E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13040 321378ce18bbacc06f919ee629a0a164 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 2.8E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13040 321378ce18bbacc06f919ee629a0a164 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 2.8E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS13040 321378ce18bbacc06f919ee629a0a164 249 SUPERFAMILY SSF51735 6 248 7.94E-83 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS13040 321378ce18bbacc06f919ee629a0a164 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 247 1.1E-68 T 29-03-2018 CVS42_RS13040 321378ce18bbacc06f919ee629a0a164 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CVS42_RS13040 321378ce18bbacc06f919ee629a0a164 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 188 0.0082 T 29-03-2018 CVS42_RS00355 aeed0168a84773d29abc83d515d2aa45 169 PIRSF PIRSF001338 2 167 2.7E-59 T 29-03-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 CVS42_RS00355 aeed0168a84773d29abc83d515d2aa45 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 7 160 29.626 T 29-03-2018 IPR033747 Class I PurE CVS42_RS00355 aeed0168a84773d29abc83d515d2aa45 169 Gene3D G3DSA:3.40.50.7700 1 166 1.1E-61 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CVS42_RS00355 aeed0168a84773d29abc83d515d2aa45 169 SUPERFAMILY SSF52255 4 160 3.66E-60 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CVS42_RS00355 aeed0168a84773d29abc83d515d2aa45 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 7 162 1.9E-57 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CVS42_RS00355 aeed0168a84773d29abc83d515d2aa45 169 Pfam PF00731 AIR carboxylase 7 156 1.7E-58 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CVS42_RS00355 aeed0168a84773d29abc83d515d2aa45 169 SMART SM01001 5 160 1.5E-92 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CVS42_RS13450 90a8ffcaaf0d86e09830f3b36fa0f561 272 SMART SM00382 50 259 9.2E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS13450 90a8ffcaaf0d86e09830f3b36fa0f561 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS13450 90a8ffcaaf0d86e09830f3b36fa0f561 272 Pfam PF00005 ABC transporter 42 197 4.3E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS13450 90a8ffcaaf0d86e09830f3b36fa0f561 272 SUPERFAMILY SSF52540 23 258 5.09E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS13450 90a8ffcaaf0d86e09830f3b36fa0f561 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 6.6E-128 T 29-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CVS42_RS13450 90a8ffcaaf0d86e09830f3b36fa0f561 272 Gene3D G3DSA:3.40.50.300 14 270 1.2E-63 T 29-03-2018 CVS42_RS15060 f4ba8bb3218350b0006ab9e40b27908d 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 4.2E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS15060 f4ba8bb3218350b0006ab9e40b27908d 143 Pfam PF08334 Type II secretion system (T2SS), protein G 31 137 1.3E-38 T 29-03-2018 IPR013545 Type II secretion system protein G CVS42_RS15060 f4ba8bb3218350b0006ab9e40b27908d 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS15060 f4ba8bb3218350b0006ab9e40b27908d 143 Gene3D G3DSA:3.30.700.10 22 137 3.0E-33 T 29-03-2018 CVS42_RS15060 f4ba8bb3218350b0006ab9e40b27908d 143 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 7 138 3.0E-57 T 29-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 CVS42_RS15060 f4ba8bb3218350b0006ab9e40b27908d 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 1.3E-22 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CVS42_RS15060 f4ba8bb3218350b0006ab9e40b27908d 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 1.3E-22 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CVS42_RS15060 f4ba8bb3218350b0006ab9e40b27908d 143 SUPERFAMILY SSF54523 34 139 4.66E-39 T 29-03-2018 CVS42_RS15060 f4ba8bb3218350b0006ab9e40b27908d 143 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 1.5E-10 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS13340 ff45d250a432dcb17539ace25e48e910 219 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 214 1.1E-48 T 29-03-2018 IPR018635 Uncharacterised protein family UPF0319 CVS42_RS06100 eae096bc06ba64bb849952c5ab672732 340 Gene3D G3DSA:3.30.870.10 21 145 7.6E-8 T 29-03-2018 CVS42_RS03470 26ced6d06c701aec098c1d086539da3e 356 Gene3D G3DSA:3.10.350.10 56 109 3.8E-14 T 29-03-2018 CVS42_RS03470 26ced6d06c701aec098c1d086539da3e 356 SUPERFAMILY SSF51261 118 353 1.2E-47 T 29-03-2018 IPR011055 Duplicated hybrid motif CVS42_RS03470 26ced6d06c701aec098c1d086539da3e 356 Pfam PF01476 LysM domain 118 160 8.8E-13 T 29-03-2018 IPR018392 LysM domain CVS42_RS03470 26ced6d06c701aec098c1d086539da3e 356 Pfam PF01476 LysM domain 60 102 2.7E-12 T 29-03-2018 IPR018392 LysM domain CVS42_RS03470 26ced6d06c701aec098c1d086539da3e 356 SMART SM00257 117 161 6.6E-13 T 29-03-2018 IPR018392 LysM domain CVS42_RS03470 26ced6d06c701aec098c1d086539da3e 356 SMART SM00257 59 103 1.3E-11 T 29-03-2018 IPR018392 LysM domain CVS42_RS03470 26ced6d06c701aec098c1d086539da3e 356 Gene3D G3DSA:2.70.70.10 202 356 3.8E-38 T 29-03-2018 CVS42_RS03470 26ced6d06c701aec098c1d086539da3e 356 SUPERFAMILY SSF54106 59 102 4.32E-10 T 29-03-2018 IPR018392 LysM domain CVS42_RS03470 26ced6d06c701aec098c1d086539da3e 356 Gene3D G3DSA:3.10.350.10 110 182 1.5E-15 T 29-03-2018 CVS42_RS03470 26ced6d06c701aec098c1d086539da3e 356 Pfam PF01551 Peptidase family M23 255 349 3.3E-29 T 29-03-2018 IPR016047 Peptidase M23 CVS42_RS18395 7da5c692681b8486421244d893246ee2 377 Pfam PF02595 Glycerate kinase family 3 373 4.7E-147 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CVS42_RS18395 7da5c692681b8486421244d893246ee2 377 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 1.5E-158 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CVS42_RS18395 7da5c692681b8486421244d893246ee2 377 PIRSF PIRSF006078 1 376 1.7E-134 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CVS42_RS18395 7da5c692681b8486421244d893246ee2 377 Gene3D G3DSA:3.90.1510.10 42 276 7.0E-94 T 29-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 CVS42_RS18395 7da5c692681b8486421244d893246ee2 377 SUPERFAMILY SSF110738 1 375 9.81E-141 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CVS42_RS00720 563772561a69d35aa598599d28edc937 577 SUPERFAMILY SSF58104 267 576 7.85E-73 T 29-03-2018 CVS42_RS00720 563772561a69d35aa598599d28edc937 577 SMART SM00304 245 299 9.9E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS00720 563772561a69d35aa598599d28edc937 577 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 363 542 4.4E-42 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS00720 563772561a69d35aa598599d28edc937 577 Gene3D G3DSA:1.10.287.950 35 349 3.1E-9 T 29-03-2018 CVS42_RS00720 563772561a69d35aa598599d28edc937 577 Gene3D G3DSA:1.10.287.950 350 577 5.1E-52 T 29-03-2018 CVS42_RS00720 563772561a69d35aa598599d28edc937 577 SMART SM00283 314 575 2.0E-66 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS16700 7c017c431b29a41928b164491d47b64b 296 SUPERFAMILY SSF48576 7 289 3.42E-88 T 29-03-2018 IPR008949 Isoprenoid synthase domain CVS42_RS16700 7c017c431b29a41928b164491d47b64b 296 Gene3D G3DSA:1.10.600.10 2 260 5.6E-83 T 29-03-2018 IPR008949 Isoprenoid synthase domain CVS42_RS16700 7c017c431b29a41928b164491d47b64b 296 Gene3D G3DSA:1.10.600.10 261 296 6.9E-4 T 29-03-2018 IPR008949 Isoprenoid synthase domain CVS42_RS16700 7c017c431b29a41928b164491d47b64b 296 Pfam PF00348 Polyprenyl synthetase 31 264 2.9E-59 T 29-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 CVS42_RS16700 7c017c431b29a41928b164491d47b64b 296 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site CVS42_RS16700 7c017c431b29a41928b164491d47b64b 296 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site CVS42_RS02285 0a3755b424742f41f0cc2581daa1d2b0 72 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 6.8E-21 T 29-03-2018 IPR014318 Phage shock protein, PspG CVS42_RS02285 0a3755b424742f41f0cc2581daa1d2b0 72 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 1.5E-16 T 29-03-2018 IPR014318 Phage shock protein, PspG CVS42_RS05370 dc8d1de804674c7ea6289e8e0064a1b5 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 245 2.9E-12 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS05370 dc8d1de804674c7ea6289e8e0064a1b5 254 Gene3D G3DSA:3.40.190.10 20 151 4.7E-9 T 29-03-2018 CVS42_RS05370 dc8d1de804674c7ea6289e8e0064a1b5 254 Gene3D G3DSA:3.40.190.10 152 254 3.9E-6 T 29-03-2018 CVS42_RS05370 dc8d1de804674c7ea6289e8e0064a1b5 254 SUPERFAMILY SSF53850 15 248 1.97E-28 T 29-03-2018 CVS42_RS02170 9b1826ef4e8b8186ae3c195a5825416b 149 Pfam PF06853 Protein of unknown function (DUF1249) 29 142 2.7E-42 T 29-03-2018 IPR009659 Protein of unknown function DUF1249 CVS42_RS04000 ecfbfa8f0791831495438983b7dafd09 322 Gene3D G3DSA:2.130.10.10 15 133 3.1E-13 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CVS42_RS04000 ecfbfa8f0791831495438983b7dafd09 322 SMART SM00320 23 60 23.0 T 29-03-2018 IPR001680 WD40 repeat GO:0005515 CVS42_RS04000 ecfbfa8f0791831495438983b7dafd09 322 SMART SM00320 190 227 5.1 T 29-03-2018 IPR001680 WD40 repeat GO:0005515 CVS42_RS04000 ecfbfa8f0791831495438983b7dafd09 322 SMART SM00320 107 146 100.0 T 29-03-2018 IPR001680 WD40 repeat GO:0005515 CVS42_RS04000 ecfbfa8f0791831495438983b7dafd09 322 SMART SM00320 230 271 2.1 T 29-03-2018 IPR001680 WD40 repeat GO:0005515 CVS42_RS04000 ecfbfa8f0791831495438983b7dafd09 322 SMART SM00320 149 187 2.0E-4 T 29-03-2018 IPR001680 WD40 repeat GO:0005515 CVS42_RS04000 ecfbfa8f0791831495438983b7dafd09 322 SMART SM00320 282 320 11.0 T 29-03-2018 IPR001680 WD40 repeat GO:0005515 CVS42_RS04000 ecfbfa8f0791831495438983b7dafd09 322 Gene3D G3DSA:2.130.10.10 134 322 5.1E-35 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CVS42_RS04000 ecfbfa8f0791831495438983b7dafd09 322 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 174 188 - T 29-03-2018 IPR019775 WD40 repeat, conserved site CVS42_RS04000 ecfbfa8f0791831495438983b7dafd09 322 SUPERFAMILY SSF50998 37 321 4.08E-47 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CVS42_RS04000 ecfbfa8f0791831495438983b7dafd09 322 Pfam PF00400 WD domain, G-beta repeat 155 187 0.003 T 29-03-2018 IPR001680 WD40 repeat GO:0005515 CVS42_RS17515 cc4ceefedf089843c1a90fa208f8b140 208 PIRSF PIRSF006324 1 208 2.6E-51 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CVS42_RS17515 cc4ceefedf089843c1a90fa208f8b140 208 Pfam PF01810 LysE type translocator 17 207 1.2E-38 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CVS42_RS08755 422cac2f2f1a4fc129630564e6928270 288 Gene3D G3DSA:1.10.10.10 1 86 2.3E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08755 422cac2f2f1a4fc129630564e6928270 288 Pfam PF03466 LysR substrate binding domain 90 280 1.6E-23 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS08755 422cac2f2f1a4fc129630564e6928270 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS08755 422cac2f2f1a4fc129630564e6928270 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS08755 422cac2f2f1a4fc129630564e6928270 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS08755 422cac2f2f1a4fc129630564e6928270 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 5.5E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS08755 422cac2f2f1a4fc129630564e6928270 288 SUPERFAMILY SSF46785 3 85 1.61E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08755 422cac2f2f1a4fc129630564e6928270 288 SUPERFAMILY SSF53850 90 282 2.35E-23 T 29-03-2018 CVS42_RS08755 422cac2f2f1a4fc129630564e6928270 288 Gene3D G3DSA:3.40.190.10 87 283 3.0E-13 T 29-03-2018 CVS42_RS01065 99ecff6e769debfee04f798cac631ccc 304 SUPERFAMILY SSF103481 191 291 5.1E-9 T 29-03-2018 CVS42_RS01065 99ecff6e769debfee04f798cac631ccc 304 Pfam PF00892 EamA-like transporter family 8 143 6.0E-17 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS01065 99ecff6e769debfee04f798cac631ccc 304 Pfam PF00892 EamA-like transporter family 157 286 4.1E-11 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS01065 99ecff6e769debfee04f798cac631ccc 304 SUPERFAMILY SSF103481 61 146 5.36E-11 T 29-03-2018 CVS42_RS03940 df42811ed5763e1b405e6ddf2818b47a 134 Gene3D G3DSA:2.20.25.10 1 29 2.2E-15 T 29-03-2018 CVS42_RS03940 df42811ed5763e1b405e6ddf2818b47a 134 SUPERFAMILY SSF82784 1 132 4.84E-42 T 29-03-2018 IPR003718 OsmC/Ohr family CVS42_RS03940 df42811ed5763e1b405e6ddf2818b47a 134 Pfam PF02566 OsmC-like protein 31 127 2.0E-19 T 29-03-2018 IPR003718 OsmC/Ohr family CVS42_RS03940 df42811ed5763e1b405e6ddf2818b47a 134 Gene3D G3DSA:3.30.300.20 35 133 2.5E-21 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CVS42_RS14980 51602fe35e77765d13762edec4e3b1f0 676 Pfam PF01431 Peptidase family M13 472 673 4.8E-75 T 29-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CVS42_RS14980 51602fe35e77765d13762edec4e3b1f0 676 Gene3D G3DSA:3.40.390.10 25 676 7.9E-127 T 29-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CVS42_RS14980 51602fe35e77765d13762edec4e3b1f0 676 Pfam PF05649 Peptidase family M13 45 420 2.1E-90 T 29-03-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 CVS42_RS14980 51602fe35e77765d13762edec4e3b1f0 676 SUPERFAMILY SSF55486 30 676 3.96E-203 T 29-03-2018 CVS42_RS14980 51602fe35e77765d13762edec4e3b1f0 676 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 482 494 2.1E-21 T 29-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CVS42_RS14980 51602fe35e77765d13762edec4e3b1f0 676 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 503 519 2.1E-21 T 29-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CVS42_RS14980 51602fe35e77765d13762edec4e3b1f0 676 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 574 585 2.1E-21 T 29-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CVS42_RS14980 51602fe35e77765d13762edec4e3b1f0 676 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 464 476 2.1E-21 T 29-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CVS42_RS06315 561ab454446217240a40ecaa1a9c240f 424 Pfam PF07687 Peptidase dimerisation domain 218 308 1.1E-8 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CVS42_RS06315 561ab454446217240a40ecaa1a9c240f 424 Gene3D G3DSA:3.40.630.10 2 253 4.9E-33 T 29-03-2018 CVS42_RS06315 561ab454446217240a40ecaa1a9c240f 424 Gene3D G3DSA:3.40.630.10 278 423 2.6E-16 T 29-03-2018 CVS42_RS06315 561ab454446217240a40ecaa1a9c240f 424 Pfam PF01546 Peptidase family M20/M25/M40 100 412 4.7E-24 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CVS42_RS06315 561ab454446217240a40ecaa1a9c240f 424 SUPERFAMILY SSF53187 329 415 1.42E-55 T 29-03-2018 CVS42_RS06315 561ab454446217240a40ecaa1a9c240f 424 SUPERFAMILY SSF53187 82 230 1.42E-55 T 29-03-2018 CVS42_RS06315 561ab454446217240a40ecaa1a9c240f 424 SUPERFAMILY SSF53187 4 45 1.42E-55 T 29-03-2018 CVS42_RS06315 561ab454446217240a40ecaa1a9c240f 424 SUPERFAMILY SSF55031 216 320 1.96E-24 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CVS42_RS06315 561ab454446217240a40ecaa1a9c240f 424 PIRSF PIRSF005962 1 420 4.7E-108 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CVS42_RS06315 561ab454446217240a40ecaa1a9c240f 424 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 7 404 2.9E-86 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CVS42_RS00795 6b79583fd08dae1fd44dd062d4f9bf04 365 SUPERFAMILY SSF53850 25 364 1.75E-100 T 29-03-2018 CVS42_RS00795 6b79583fd08dae1fd44dd062d4f9bf04 365 Gene3D G3DSA:3.40.190.10 18 202 1.3E-32 T 29-03-2018 CVS42_RS00795 6b79583fd08dae1fd44dd062d4f9bf04 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 154 168 1.9E-66 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00795 6b79583fd08dae1fd44dd062d4f9bf04 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 309 335 1.9E-66 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00795 6b79583fd08dae1fd44dd062d4f9bf04 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 264 283 1.9E-66 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00795 6b79583fd08dae1fd44dd062d4f9bf04 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 90 103 1.9E-66 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00795 6b79583fd08dae1fd44dd062d4f9bf04 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 177 196 1.9E-66 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00795 6b79583fd08dae1fd44dd062d4f9bf04 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 31 47 1.9E-66 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00795 6b79583fd08dae1fd44dd062d4f9bf04 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 47 68 1.9E-66 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00795 6b79583fd08dae1fd44dd062d4f9bf04 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 1.9E-66 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00795 6b79583fd08dae1fd44dd062d4f9bf04 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 74 88 1.9E-66 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00795 6b79583fd08dae1fd44dd062d4f9bf04 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 214 233 1.9E-66 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00795 6b79583fd08dae1fd44dd062d4f9bf04 365 PIRSF PIRSF019574 1 365 1.0E-137 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CVS42_RS00795 6b79583fd08dae1fd44dd062d4f9bf04 365 Pfam PF13416 Bacterial extracellular solute-binding protein 42 328 1.3E-29 T 29-03-2018 CVS42_RS00795 6b79583fd08dae1fd44dd062d4f9bf04 365 Gene3D G3DSA:3.40.190.10 203 331 1.2E-18 T 29-03-2018 CVS42_RS13995 b5f57d4de9fe3b68ee3ad500361efbf2 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 2.9E-47 T 29-03-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 CVS42_RS13995 b5f57d4de9fe3b68ee3ad500361efbf2 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 29-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CVS42_RS13995 b5f57d4de9fe3b68ee3ad500361efbf2 87 SUPERFAMILY SSF52833 4 81 7.79E-20 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS13995 b5f57d4de9fe3b68ee3ad500361efbf2 87 Gene3D G3DSA:3.40.30.10 1 83 5.8E-20 T 29-03-2018 CVS42_RS13995 b5f57d4de9fe3b68ee3ad500361efbf2 87 Pfam PF00462 Glutaredoxin 4 69 2.2E-15 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CVS42_RS13995 b5f57d4de9fe3b68ee3ad500361efbf2 87 PRINTS PR00160 Glutaredoxin signature 66 79 9.0E-11 T 29-03-2018 IPR014025 Glutaredoxin subgroup CVS42_RS13995 b5f57d4de9fe3b68ee3ad500361efbf2 87 PRINTS PR00160 Glutaredoxin signature 3 21 9.0E-11 T 29-03-2018 IPR014025 Glutaredoxin subgroup CVS42_RS13995 b5f57d4de9fe3b68ee3ad500361efbf2 87 PRINTS PR00160 Glutaredoxin signature 52 65 9.0E-11 T 29-03-2018 IPR014025 Glutaredoxin subgroup CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 Gene3D G3DSA:2.150.10.10 1003 1343 3.6E-24 T 29-03-2018 CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 Gene3D G3DSA:2.60.120.640 113 235 6.6E-5 T 29-03-2018 CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 Gene3D G3DSA:2.60.120.640 524 671 0.031 T 29-03-2018 CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 SMART SM00327 725 919 2.3E-14 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 SUPERFAMILY SSF53300 714 893 2.97E-22 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 1258 1353 1.1E-12 T 29-03-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 Gene3D G3DSA:2.60.40.10 243 371 0.012 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1199 1217 - T 29-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 Gene3D G3DSA:3.40.50.410 723 918 2.2E-29 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1190 1208 - T 29-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 SUPERFAMILY SSF51120 1098 1134 5.1E-25 T 29-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 SUPERFAMILY SSF51120 1179 1325 5.1E-25 T 29-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 Pfam PF13519 von Willebrand factor type A domain 729 839 3.8E-14 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 702 714 38.0 T 29-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1229 1245 13.0 T 29-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1193 1210 0.011 T 29-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1212 1228 2.4 T 29-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1103 1118 0.017 T 29-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1178 1192 0.0026 T 29-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 PRINTS PR00313 NodO calcium binding signature 1230 1239 2.2E-9 T 29-03-2018 CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 PRINTS PR00313 NodO calcium binding signature 1108 1119 2.2E-9 T 29-03-2018 CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 PRINTS PR00313 NodO calcium binding signature 1212 1220 2.2E-9 T 29-03-2018 CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 PRINTS PR00313 NodO calcium binding signature 1185 1193 2.2E-9 T 29-03-2018 CVS42_RS07525 511528f2d65eb9af9b79fb8cda640d6f 1356 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1217 1235 - T 29-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site CVS42_RS08855 7e0d73c7485281c30104aaae2b1a3fd7 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.7E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS08855 7e0d73c7485281c30104aaae2b1a3fd7 301 SUPERFAMILY SSF53850 89 295 5.07E-44 T 29-03-2018 CVS42_RS08855 7e0d73c7485281c30104aaae2b1a3fd7 301 SUPERFAMILY SSF46785 3 112 1.3E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08855 7e0d73c7485281c30104aaae2b1a3fd7 301 Pfam PF03466 LysR substrate binding domain 88 291 1.1E-50 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS08855 7e0d73c7485281c30104aaae2b1a3fd7 301 Gene3D G3DSA:1.10.10.10 1 84 1.2E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08855 7e0d73c7485281c30104aaae2b1a3fd7 301 Gene3D G3DSA:3.40.190.10 176 266 8.1E-24 T 29-03-2018 CVS42_RS08855 7e0d73c7485281c30104aaae2b1a3fd7 301 Gene3D G3DSA:3.40.190.10 88 175 1.4E-19 T 29-03-2018 CVS42_RS19580 612ad6d4ea295cf6ff4099d2cf15a91c 116 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 116 36.974 T 29-03-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 CVS42_RS19580 612ad6d4ea295cf6ff4099d2cf15a91c 116 Gene3D G3DSA:2.60.300.12 10 116 9.0E-41 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CVS42_RS19580 612ad6d4ea295cf6ff4099d2cf15a91c 116 Pfam PF01521 Iron-sulphur cluster biosynthesis 11 111 3.0E-22 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CVS42_RS19580 612ad6d4ea295cf6ff4099d2cf15a91c 116 SUPERFAMILY SSF89360 10 105 6.54E-32 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CVS42_RS19580 612ad6d4ea295cf6ff4099d2cf15a91c 116 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 29-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CVS42_RS19580 612ad6d4ea295cf6ff4099d2cf15a91c 116 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 11 115 3.2E-40 T 29-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CVS42_RS08180 ba0e3d4350db664fd69c051ace1a5f38 488 Pfam PF13148 Protein of unknown function (DUF3987) 32 391 6.7E-77 T 29-03-2018 IPR025048 Protein of unknown function DUF3987) CVS42_RS15000 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 Gene3D G3DSA:3.30.1340.10 1 85 3.3E-32 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS15000 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.0E-28 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS15000 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.0E-28 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS15000 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CVS42_RS15000 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.3E-19 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS15000 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.3E-19 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS15000 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.3E-19 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS15000 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 SUPERFAMILY SSF55594 1 82 9.03E-27 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CVS42_RS15000 ff99e6e9dd3e8b59b24b474e9a7afe5d 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CVS42_RS15790 9ea4cc06d18884fceb3071416c84ab57 517 SMART SM00862 24 100 5.9E-15 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS15790 9ea4cc06d18884fceb3071416c84ab57 517 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 1.6E-16 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS15790 9ea4cc06d18884fceb3071416c84ab57 517 Gene3D G3DSA:1.25.40.10 224 512 2.3E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS15790 9ea4cc06d18884fceb3071416c84ab57 517 Gene3D G3DSA:1.10.10.10 1 106 9.1E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS15790 9ea4cc06d18884fceb3071416c84ab57 517 SUPERFAMILY SSF46894 2 102 2.61E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS13900 d985c518f8da1346927ed2c8043d746f 98 Gene3D G3DSA:1.10.1220.10 21 90 7.1E-7 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CVS42_RS13900 d985c518f8da1346927ed2c8043d746f 98 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 88 4.5E-5 T 29-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 CVS42_RS16805 021090a5f963e483f48c5a4b9da9dbdb 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 231 8.7E-21 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS16805 021090a5f963e483f48c5a4b9da9dbdb 237 SMART SM00862 155 231 7.5E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS16805 021090a5f963e483f48c5a4b9da9dbdb 237 Gene3D G3DSA:3.40.50.2300 1 129 2.2E-34 T 29-03-2018 CVS42_RS16805 021090a5f963e483f48c5a4b9da9dbdb 237 Pfam PF00072 Response regulator receiver domain 5 113 9.2E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS16805 021090a5f963e483f48c5a4b9da9dbdb 237 Gene3D G3DSA:1.10.10.10 130 236 3.2E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS16805 021090a5f963e483f48c5a4b9da9dbdb 237 SMART SM00448 3 113 2.3E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS16805 021090a5f963e483f48c5a4b9da9dbdb 237 SUPERFAMILY SSF52172 2 123 2.28E-37 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS16805 021090a5f963e483f48c5a4b9da9dbdb 237 SUPERFAMILY SSF46894 132 232 4.25E-26 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS19840 c264b1e21a21795b4e09c7decf8f9db6 189 Gene3D G3DSA:1.10.260.40 1 69 2.8E-16 T 29-03-2018 CVS42_RS19840 c264b1e21a21795b4e09c7decf8f9db6 189 Gene3D G3DSA:2.60.120.10 70 185 1.7E-14 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS19840 c264b1e21a21795b4e09c7decf8f9db6 189 Pfam PF07883 Cupin domain 113 178 1.7E-9 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CVS42_RS19840 c264b1e21a21795b4e09c7decf8f9db6 189 Pfam PF01381 Helix-turn-helix 14 64 7.0E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS19840 c264b1e21a21795b4e09c7decf8f9db6 189 SUPERFAMILY SSF47413 2 70 2.33E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS19840 c264b1e21a21795b4e09c7decf8f9db6 189 SMART SM00530 11 66 1.6E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS19840 c264b1e21a21795b4e09c7decf8f9db6 189 SUPERFAMILY SSF51182 59 186 1.19E-24 T 29-03-2018 IPR011051 RmlC-like cupin domain CVS42_RS21165 0783bbc573936032134eb86455255c0c 443 Gene3D G3DSA:3.40.640.10 76 328 1.7E-69 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS21165 0783bbc573936032134eb86455255c0c 443 Gene3D G3DSA:3.90.1150.10 329 442 5.9E-31 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS21165 0783bbc573936032134eb86455255c0c 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 253 290 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS21165 0783bbc573936032134eb86455255c0c 443 Gene3D G3DSA:3.90.1150.10 5 75 8.3E-4 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS21165 0783bbc573936032134eb86455255c0c 443 SUPERFAMILY SSF53383 16 440 6.05E-121 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS21165 0783bbc573936032134eb86455255c0c 443 Pfam PF00202 Aminotransferase class-III 29 439 8.6E-93 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS12685 e347e052f083b77efc3db1eacc365c42 247 Pfam PF02508 Rnf-Nqr subunit, membrane protein 20 214 1.5E-65 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CVS42_RS12685 e347e052f083b77efc3db1eacc365c42 247 PIRSF PIRSF006102 15 233 1.2E-77 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CVS42_RS12685 e347e052f083b77efc3db1eacc365c42 247 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 15 224 27.595 T 29-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CVS42_RS12685 e347e052f083b77efc3db1eacc365c42 247 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 20 221 3.4E-83 T 29-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CVS42_RS19795 d245b7568123e6e73c8bda752c7e0a78 154 SUPERFAMILY SSF55826 2 152 2.09E-37 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CVS42_RS19795 d245b7568123e6e73c8bda752c7e0a78 154 Gene3D G3DSA:3.90.960.10 1 154 2.7E-34 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CVS42_RS19795 d245b7568123e6e73c8bda752c7e0a78 154 PIRSF PIRSF006181 1 154 1.4E-51 T 29-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CVS42_RS19795 d245b7568123e6e73c8bda752c7e0a78 154 Pfam PF04073 Aminoacyl-tRNA editing domain 31 141 3.3E-25 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CVS42_RS19795 d245b7568123e6e73c8bda752c7e0a78 154 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 150 4.3E-53 T 29-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CVS42_RS00815 a8b3012e9e37ef563937bd2d4b72bc64 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 266 1.6E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS00815 a8b3012e9e37ef563937bd2d4b72bc64 280 SUPERFAMILY SSF161098 4 261 3.27E-50 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS00815 a8b3012e9e37ef563937bd2d4b72bc64 280 Gene3D G3DSA:1.10.3720.10 4 268 2.1E-40 T 29-03-2018 CVS42_RS11865 162a44f4c4a6b593cc4505c00d07e50f 207 SMART SM01144 8 203 6.5E-62 T 29-03-2018 IPR005636 DTW CVS42_RS11865 162a44f4c4a6b593cc4505c00d07e50f 207 Pfam PF03942 DTW domain 10 195 2.5E-46 T 29-03-2018 IPR005636 DTW CVS42_RS05330 3f9c92ef7bb6e363162e015f1a3d56cc 197 Pfam PF11748 Protein of unknown function (DUF3306) 3 117 2.1E-16 T 29-03-2018 IPR021735 Protein of unknown function DUF3306 CVS42_RS14970 9a85651df8ea26e1da7b30bd4dd17265 1109 SUPERFAMILY SSF50182 916 981 9.81E-18 T 29-03-2018 IPR010920 LSM domain CVS42_RS14970 9a85651df8ea26e1da7b30bd4dd17265 1109 Gene3D G3DSA:2.30.30.60 932 982 8.1E-14 T 29-03-2018 CVS42_RS14970 9a85651df8ea26e1da7b30bd4dd17265 1109 Gene3D G3DSA:3.30.70.100 983 1077 4.1E-20 T 29-03-2018 CVS42_RS14970 9a85651df8ea26e1da7b30bd4dd17265 1109 Pfam PF12795 Mechanosensitive ion channel porin domain 43 274 3.4E-47 T 29-03-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain CVS42_RS14970 9a85651df8ea26e1da7b30bd4dd17265 1109 SUPERFAMILY SSF82861 830 914 1.57E-8 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CVS42_RS14970 9a85651df8ea26e1da7b30bd4dd17265 1109 SUPERFAMILY SSF82689 983 1083 2.35E-27 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CVS42_RS14970 9a85651df8ea26e1da7b30bd4dd17265 1109 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 496 812 3.3E-92 T 29-03-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CVS42_RS14970 9a85651df8ea26e1da7b30bd4dd17265 1109 Pfam PF00924 Mechanosensitive ion channel 873 1072 1.4E-57 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CVS42_RS08995 fd006c51bfce76ab14081dca84447dbe 185 PIRSF PIRSF011484 1 180 5.1E-71 T 29-03-2018 IPR009822 YaeQ CVS42_RS08995 fd006c51bfce76ab14081dca84447dbe 185 SUPERFAMILY SSF52980 2 178 5.36E-73 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CVS42_RS08995 fd006c51bfce76ab14081dca84447dbe 185 Pfam PF07152 YaeQ protein 1 172 1.1E-76 T 29-03-2018 IPR009822 YaeQ CVS42_RS08995 fd006c51bfce76ab14081dca84447dbe 185 SMART SM01322 1 176 1.5E-121 T 29-03-2018 IPR009822 YaeQ CVS42_RS08995 fd006c51bfce76ab14081dca84447dbe 185 Gene3D G3DSA:3.10.640.10 2 177 2.2E-78 T 29-03-2018 CVS42_RS00635 421830598f5282ea2b396d5d0c195a40 177 PIRSF PIRSF039093 1 175 5.1E-85 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CVS42_RS00635 421830598f5282ea2b396d5d0c195a40 177 Gene3D G3DSA:3.60.20.10 2 174 4.2E-32 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS00635 421830598f5282ea2b396d5d0c195a40 177 Pfam PF00227 Proteasome subunit 2 171 9.2E-24 T 29-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CVS42_RS00635 421830598f5282ea2b396d5d0c195a40 177 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 171 2.2E-84 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CVS42_RS00635 421830598f5282ea2b396d5d0c195a40 177 SUPERFAMILY SSF56235 2 172 6.51E-58 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS00635 421830598f5282ea2b396d5d0c195a40 177 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 40.548 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CVS42_RS15010 24794904df0efcd0460ecc7d6e39dd3a 280 SUPERFAMILY SSF52540 14 237 1.84E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS15010 24794904df0efcd0460ecc7d6e39dd3a 280 SMART SM00382 25 183 1.6E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS15010 24794904df0efcd0460ecc7d6e39dd3a 280 Gene3D G3DSA:3.40.50.300 4 214 2.7E-32 T 29-03-2018 CVS42_RS15010 24794904df0efcd0460ecc7d6e39dd3a 280 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 175 1.5E-12 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CVS42_RS16505 b5cc70f771e569275fae734bdeb2d31a 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 3.9E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS16505 b5cc70f771e569275fae734bdeb2d31a 139 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 1.4E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS16505 b5cc70f771e569275fae734bdeb2d31a 139 Gene3D G3DSA:3.30.700.10 6 115 5.7E-10 T 29-03-2018 CVS42_RS16505 b5cc70f771e569275fae734bdeb2d31a 139 Pfam PF12019 Type II transport protein GspH 42 131 9.5E-11 T 29-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 CVS42_RS16505 b5cc70f771e569275fae734bdeb2d31a 139 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS16505 b5cc70f771e569275fae734bdeb2d31a 139 SUPERFAMILY SSF54523 6 104 8.63E-13 T 29-03-2018 CVS42_RS21600 d2c3826ee2391ab1ce4ccedaa8bd2361 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 7.2E-27 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS21600 d2c3826ee2391ab1ce4ccedaa8bd2361 55 Pfam PF00471 Ribosomal protein L33 7 53 2.3E-17 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS21600 d2c3826ee2391ab1ce4ccedaa8bd2361 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 29-03-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS21600 d2c3826ee2391ab1ce4ccedaa8bd2361 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.053 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS21600 d2c3826ee2391ab1ce4ccedaa8bd2361 55 SUPERFAMILY SSF57829 1 53 4.27E-19 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CVS42_RS10595 29534f1dde776c1665aaa326e39016c8 271 SUPERFAMILY SSF56770 40 172 4.19E-51 T 29-03-2018 CVS42_RS10595 29534f1dde776c1665aaa326e39016c8 271 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 135 151 - T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10595 29534f1dde776c1665aaa326e39016c8 271 Gene3D G3DSA:3.40.50.700 24 187 1.7E-30 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10595 29534f1dde776c1665aaa326e39016c8 271 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 52 160 6.6E-24 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS01910 e23ec299aa6ef1ed6ca6631a48b8a97e 432 Gene3D G3DSA:1.10.3210.10 83 346 6.5E-31 T 29-03-2018 CVS42_RS01910 e23ec299aa6ef1ed6ca6631a48b8a97e 432 SUPERFAMILY SSF109604 184 344 1.14E-25 T 29-03-2018 CVS42_RS01910 e23ec299aa6ef1ed6ca6631a48b8a97e 432 Pfam PF11871 Domain of unknown function (DUF3391) 24 155 2.6E-32 T 29-03-2018 IPR021812 Protein of unknown function DUF3391 CVS42_RS01910 e23ec299aa6ef1ed6ca6631a48b8a97e 432 Pfam PF13487 HD domain 239 295 3.0E-11 T 29-03-2018 CVS42_RS12275 f87bed4a61b7334936813331992a7ef8 185 Pfam PF01169 Uncharacterized protein family UPF0016 104 178 9.8E-23 T 29-03-2018 IPR001727 Gdt1 family CVS42_RS12275 f87bed4a61b7334936813331992a7ef8 185 Pfam PF01169 Uncharacterized protein family UPF0016 5 80 2.5E-20 T 29-03-2018 IPR001727 Gdt1 family CVS42_RS16540 223fb2cce2ed0d514d8e775f48de808a 362 Gene3D G3DSA:3.40.47.10 195 323 1.3E-32 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS16540 223fb2cce2ed0d514d8e775f48de808a 362 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 322 2.5E-112 T 29-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CVS42_RS16540 223fb2cce2ed0d514d8e775f48de808a 362 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 105 182 6.2E-29 T 29-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CVS42_RS16540 223fb2cce2ed0d514d8e775f48de808a 362 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 233 322 2.3E-36 T 29-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CVS42_RS16540 223fb2cce2ed0d514d8e775f48de808a 362 SUPERFAMILY SSF53901 3 323 2.01E-66 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS16540 223fb2cce2ed0d514d8e775f48de808a 362 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 322 65.014 T 29-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CVS42_RS16540 223fb2cce2ed0d514d8e775f48de808a 362 Gene3D G3DSA:3.40.47.10 1 186 9.9E-47 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CVS42_RS14750 e1957a09952223af243655fe3a571b7d 699 Gene3D G3DSA:3.40.50.1440 64 410 4.7E-21 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CVS42_RS14750 e1957a09952223af243655fe3a571b7d 699 SUPERFAMILY SSF52490 133 330 3.33E-6 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CVS42_RS14750 e1957a09952223af243655fe3a571b7d 699 SUPERFAMILY SSF52490 62 84 3.33E-6 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CVS42_RS05980 224b7555a18b3210748915dfaedc3037 814 SUPERFAMILY SSF52743 209 665 4.19E-41 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CVS42_RS05980 224b7555a18b3210748915dfaedc3037 814 Pfam PF00082 Subtilase family 271 588 1.1E-29 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CVS42_RS05980 224b7555a18b3210748915dfaedc3037 814 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 274 285 - T 29-03-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site CVS42_RS05980 224b7555a18b3210748915dfaedc3037 814 PRINTS PR00723 Subtilisin serine protease family (S8) signature 269 288 1.1E-5 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CVS42_RS05980 224b7555a18b3210748915dfaedc3037 814 PRINTS PR00723 Subtilisin serine protease family (S8) signature 536 552 1.1E-5 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CVS42_RS05980 224b7555a18b3210748915dfaedc3037 814 PRINTS PR00723 Subtilisin serine protease family (S8) signature 308 321 1.1E-5 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CVS42_RS05980 224b7555a18b3210748915dfaedc3037 814 Gene3D G3DSA:3.40.50.200 258 623 5.0E-30 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CVS42_RS00890 8cad5c482e75be2a4b5fc4cf5228c393 735 Gene3D G3DSA:3.40.50.300 192 375 9.8E-24 T 29-03-2018 CVS42_RS00890 8cad5c482e75be2a4b5fc4cf5228c393 735 SUPERFAMILY SSF52540 222 444 1.36E-38 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00890 8cad5c482e75be2a4b5fc4cf5228c393 735 SUPERFAMILY SSF52540 507 604 1.36E-38 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00890 8cad5c482e75be2a4b5fc4cf5228c393 735 TIGRFAM TIGR00595 priA: primosomal protein N' 225 731 4.8E-182 T 29-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CVS42_RS00890 8cad5c482e75be2a4b5fc4cf5228c393 735 Pfam PF00270 DEAD/DEAH box helicase 222 368 5.7E-12 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CVS42_RS00890 8cad5c482e75be2a4b5fc4cf5228c393 735 Pfam PF00271 Helicase conserved C-terminal domain 524 592 4.0E-6 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS00890 8cad5c482e75be2a4b5fc4cf5228c393 735 Gene3D G3DSA:3.40.50.300 388 624 3.8E-22 T 29-03-2018 CVS42_RS00890 8cad5c482e75be2a4b5fc4cf5228c393 735 SMART SM00490 496 593 5.4E-10 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS00890 8cad5c482e75be2a4b5fc4cf5228c393 735 SMART SM00487 199 395 1.2E-16 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS00890 8cad5c482e75be2a4b5fc4cf5228c393 735 Hamap MF_00983 Probable primosomal protein N' [priA]. 12 734 24.539 T 29-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CVS42_RS00580 1a86ffb2a6714a485c006a3edf78c8b6 372 Gene3D G3DSA:1.10.3470.10 5 353 1.9E-38 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CVS42_RS00580 1a86ffb2a6714a485c006a3edf78c8b6 372 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 342 3.0E-36 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CVS42_RS08485 f86bed411a5f4cb233417817be998e15 161 Gene3D G3DSA:3.40.50.300 41 155 6.8E-11 T 29-03-2018 CVS42_RS08485 f86bed411a5f4cb233417817be998e15 161 SUPERFAMILY SSF52540 43 134 1.96E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS06170 a7299de945fd1c557e6e73b0ddef2d45 244 SMART SM00052 4 240 2.3E-12 T 29-03-2018 IPR001633 EAL domain CVS42_RS06170 a7299de945fd1c557e6e73b0ddef2d45 244 Pfam PF00563 EAL domain 20 235 1.4E-34 T 29-03-2018 IPR001633 EAL domain CVS42_RS06170 a7299de945fd1c557e6e73b0ddef2d45 244 SUPERFAMILY SSF141868 20 240 1.07E-40 T 29-03-2018 IPR001633 EAL domain CVS42_RS06170 a7299de945fd1c557e6e73b0ddef2d45 244 Gene3D G3DSA:3.20.20.450 4 244 1.5E-40 T 29-03-2018 IPR001633 EAL domain CVS42_RS10240 324708403db20b24456d65a9b0f872e5 487 SUPERFAMILY SSF51055 439 483 2.09E-14 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS10240 324708403db20b24456d65a9b0f872e5 487 SMART SM00495 442 484 1.9E-13 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS10240 324708403db20b24456d65a9b0f872e5 487 Gene3D G3DSA:2.10.10.20 441 484 3.2E-15 T 29-03-2018 CVS42_RS10240 324708403db20b24456d65a9b0f872e5 487 Gene3D G3DSA:1.10.530.10 89 347 2.8E-55 T 29-03-2018 CVS42_RS10240 324708403db20b24456d65a9b0f872e5 487 SUPERFAMILY SSF53955 91 354 1.55E-53 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS10240 324708403db20b24456d65a9b0f872e5 487 Pfam PF02839 Carbohydrate binding domain 459 481 2.2E-5 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CVS42_RS10240 324708403db20b24456d65a9b0f872e5 487 Pfam PF00182 Chitinase class I 110 330 1.8E-31 T 29-03-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CVS42_RS20735 bced087cc33f924f52c7baf4faecb934 165 Pfam PF00072 Response regulator receiver domain 7 127 7.7E-12 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS20735 bced087cc33f924f52c7baf4faecb934 165 SMART SM00448 5 126 4.9E-10 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS20735 bced087cc33f924f52c7baf4faecb934 165 SUPERFAMILY SSF52172 5 137 1.15E-18 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS20735 bced087cc33f924f52c7baf4faecb934 165 Gene3D G3DSA:3.40.50.2300 1 143 8.1E-18 T 29-03-2018 CVS42_RS18930 256b2d020a8fc5badf2aee0a1dc8e6f0 368 PRINTS PR01010 Flagellar P-ring protein signature 86 105 1.9E-75 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS18930 256b2d020a8fc5badf2aee0a1dc8e6f0 368 PRINTS PR01010 Flagellar P-ring protein signature 26 41 1.9E-75 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS18930 256b2d020a8fc5badf2aee0a1dc8e6f0 368 PRINTS PR01010 Flagellar P-ring protein signature 192 210 1.9E-75 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS18930 256b2d020a8fc5badf2aee0a1dc8e6f0 368 PRINTS PR01010 Flagellar P-ring protein signature 108 125 1.9E-75 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS18930 256b2d020a8fc5badf2aee0a1dc8e6f0 368 PRINTS PR01010 Flagellar P-ring protein signature 166 184 1.9E-75 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS18930 256b2d020a8fc5badf2aee0a1dc8e6f0 368 PRINTS PR01010 Flagellar P-ring protein signature 41 56 1.9E-75 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS18930 256b2d020a8fc5badf2aee0a1dc8e6f0 368 PRINTS PR01010 Flagellar P-ring protein signature 255 267 1.9E-75 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS18930 256b2d020a8fc5badf2aee0a1dc8e6f0 368 PRINTS PR01010 Flagellar P-ring protein signature 60 75 1.9E-75 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS18930 256b2d020a8fc5badf2aee0a1dc8e6f0 368 PRINTS PR01010 Flagellar P-ring protein signature 125 143 1.9E-75 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS18930 256b2d020a8fc5badf2aee0a1dc8e6f0 368 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 368 35.748 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS18930 256b2d020a8fc5badf2aee0a1dc8e6f0 368 Pfam PF02119 Flagellar P-ring protein 28 367 1.7E-133 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS14875 4c7874a135e8dcc735f1ba701638af18 142 Pfam PF13673 Acetyltransferase (GNAT) domain 32 140 6.5E-18 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS14875 4c7874a135e8dcc735f1ba701638af18 142 SUPERFAMILY SSF55729 1 136 2.27E-28 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS14875 4c7874a135e8dcc735f1ba701638af18 142 Gene3D G3DSA:3.40.630.30 1 77 3.7E-14 T 29-03-2018 CVS42_RS14875 4c7874a135e8dcc735f1ba701638af18 142 Gene3D G3DSA:3.40.630.30 78 142 1.9E-14 T 29-03-2018 CVS42_RS14240 a1d35d60bea71a8f2f7659c824c7f597 235 Gene3D G3DSA:3.40.50.300 1 226 1.5E-60 T 29-03-2018 CVS42_RS14240 a1d35d60bea71a8f2f7659c824c7f597 235 SUPERFAMILY SSF52540 4 223 1.12E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS14240 a1d35d60bea71a8f2f7659c824c7f597 235 Pfam PF00005 ABC transporter 24 172 2.0E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS14240 a1d35d60bea71a8f2f7659c824c7f597 235 SMART SM00382 33 221 3.3E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS14240 a1d35d60bea71a8f2f7659c824c7f597 235 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS19220 b80ae99aab21701f4b0bf6c984bb1a87 186 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 181 1.0E-44 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CVS42_RS19220 b80ae99aab21701f4b0bf6c984bb1a87 186 PIRSF PIRSF028513 1 185 7.0E-38 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CVS42_RS19220 b80ae99aab21701f4b0bf6c984bb1a87 186 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 178 3.9E-37 T 29-03-2018 IPR010664 Lipopolysaccharide assembly, LptC-related CVS42_RS19220 b80ae99aab21701f4b0bf6c984bb1a87 186 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 2 184 23.315 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CVS42_RS12330 3f96ce14728d07cd32e76220901c3a69 265 Pfam PF14091 Domain of unknown function (DUF4269) 49 209 1.8E-33 T 29-03-2018 IPR025365 Protein of unknown function DUF4269 CVS42_RS01445 0fefe790c80f1a57faaaa66d0d5230c3 482 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 333 341 - T 29-03-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CVS42_RS01445 0fefe790c80f1a57faaaa66d0d5230c3 482 Pfam PF06628 Catalase-related immune-responsive 417 477 1.3E-19 T 29-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CVS42_RS01445 0fefe790c80f1a57faaaa66d0d5230c3 482 Gene3D G3DSA:2.40.180.10 1 357 2.2E-165 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CVS42_RS01445 0fefe790c80f1a57faaaa66d0d5230c3 482 PRINTS PR00067 Catalase signature 83 101 7.8E-76 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CVS42_RS01445 0fefe790c80f1a57faaaa66d0d5230c3 482 PRINTS PR00067 Catalase signature 288 315 7.8E-76 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CVS42_RS01445 0fefe790c80f1a57faaaa66d0d5230c3 482 PRINTS PR00067 Catalase signature 20 43 7.8E-76 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CVS42_RS01445 0fefe790c80f1a57faaaa66d0d5230c3 482 PRINTS PR00067 Catalase signature 104 121 7.8E-76 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CVS42_RS01445 0fefe790c80f1a57faaaa66d0d5230c3 482 PRINTS PR00067 Catalase signature 123 141 7.8E-76 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CVS42_RS01445 0fefe790c80f1a57faaaa66d0d5230c3 482 PRINTS PR00067 Catalase signature 320 346 7.8E-76 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CVS42_RS01445 0fefe790c80f1a57faaaa66d0d5230c3 482 Pfam PF00199 Catalase 9 389 1.3E-192 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CVS42_RS01445 0fefe790c80f1a57faaaa66d0d5230c3 482 ProSitePatterns PS00438 Catalase proximal active site signature. 43 59 - T 29-03-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CVS42_RS01445 0fefe790c80f1a57faaaa66d0d5230c3 482 PIRSF PIRSF038928 1 482 8.4E-226 T 29-03-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CVS42_RS01445 0fefe790c80f1a57faaaa66d0d5230c3 482 SUPERFAMILY SSF56634 4 477 1.44E-207 T 29-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CVS42_RS01445 0fefe790c80f1a57faaaa66d0d5230c3 482 SMART SM01060 7 392 1.4E-284 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CVS42_RS19360 4925defd29ad1358a130c5dd3b846d9f 387 Gene3D G3DSA:1.25.40.10 78 160 0.013 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS19360 4925defd29ad1358a130c5dd3b846d9f 387 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 381 1.9E-92 T 29-03-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 CVS42_RS19360 4925defd29ad1358a130c5dd3b846d9f 387 Gene3D G3DSA:1.25.40.10 227 386 5.5E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS19360 4925defd29ad1358a130c5dd3b846d9f 387 Gene3D G3DSA:1.25.40.10 161 226 3.3E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS19360 4925defd29ad1358a130c5dd3b846d9f 387 SUPERFAMILY SSF48452 261 297 4.02E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS19360 4925defd29ad1358a130c5dd3b846d9f 387 SUPERFAMILY SSF48452 339 384 4.02E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS19360 4925defd29ad1358a130c5dd3b846d9f 387 SUPERFAMILY SSF48452 89 186 4.02E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS19360 4925defd29ad1358a130c5dd3b846d9f 387 Pfam PF07219 HemY protein N-terminus 26 132 2.8E-31 T 29-03-2018 IPR010817 HemY, N-terminal CVS42_RS01145 9348d0c39db3f4db860c757cada8b632 130 Pfam PF00410 Ribosomal protein S8 5 129 2.2E-47 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01145 9348d0c39db3f4db860c757cada8b632 130 SUPERFAMILY SSF56047 5 129 7.19E-46 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01145 9348d0c39db3f4db860c757cada8b632 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01145 9348d0c39db3f4db860c757cada8b632 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.688 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01145 9348d0c39db3f4db860c757cada8b632 130 Gene3D G3DSA:3.30.1370.30 1 66 1.5E-24 T 29-03-2018 CVS42_RS01145 9348d0c39db3f4db860c757cada8b632 130 Gene3D G3DSA:3.30.1490.10 74 129 2.1E-20 T 29-03-2018 CVS42_RS20140 d50115bb9649f6872ddeae8263b5d352 298 Gene3D G3DSA:3.40.50.20 1 102 4.2E-37 T 29-03-2018 CVS42_RS20140 d50115bb9649f6872ddeae8263b5d352 298 Gene3D G3DSA:3.30.1490.20 103 170 7.2E-10 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CVS42_RS20140 d50115bb9649f6872ddeae8263b5d352 298 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 284 1.1E-83 T 29-03-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 CVS42_RS20140 d50115bb9649f6872ddeae8263b5d352 298 Gene3D G3DSA:3.30.470.20 171 277 2.5E-36 T 29-03-2018 CVS42_RS20140 d50115bb9649f6872ddeae8263b5d352 298 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 51.771 T 29-03-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK CVS42_RS20140 d50115bb9649f6872ddeae8263b5d352 298 Pfam PF08443 RimK-like ATP-grasp domain 98 285 2.0E-69 T 29-03-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 CVS42_RS20140 d50115bb9649f6872ddeae8263b5d352 298 SUPERFAMILY SSF56059 98 287 7.58E-49 T 29-03-2018 CVS42_RS04645 531b4daa85bc2139e905306b5f69cc26 408 Pfam PF06224 Winged helix DNA-binding domain 38 382 1.9E-86 T 29-03-2018 IPR009351 Protein of unknown function DUF1006 CVS42_RS01775 b294c540d19edf9b2f254b50e4bf745b 202 SUPERFAMILY SSF46689 3 61 4.57E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS01775 b294c540d19edf9b2f254b50e4bf745b 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 1.0E-16 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS01775 b294c540d19edf9b2f254b50e4bf745b 202 Gene3D G3DSA:1.10.10.60 2 63 7.9E-20 T 29-03-2018 CVS42_RS01775 b294c540d19edf9b2f254b50e4bf745b 202 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 143 196 8.1E-6 T 29-03-2018 CVS42_RS01775 b294c540d19edf9b2f254b50e4bf745b 202 Gene3D G3DSA:1.10.357.10 66 202 2.6E-14 T 29-03-2018 CVS42_RS01775 b294c540d19edf9b2f254b50e4bf745b 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.2E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS01775 b294c540d19edf9b2f254b50e4bf745b 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 2.2E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS04140 23d1a83c0361f70e86ff15178e9270d6 384 PIRSF PIRSF004925 1 382 1.7E-102 T 29-03-2018 IPR026032 Probable 3-phenylpropionic acid transporter CVS42_RS04140 23d1a83c0361f70e86ff15178e9270d6 384 Gene3D G3DSA:1.20.1250.20 1 189 3.3E-13 T 29-03-2018 CVS42_RS04140 23d1a83c0361f70e86ff15178e9270d6 384 Pfam PF12832 MFS_1 like family 10 357 4.1E-42 T 29-03-2018 IPR024989 Major facilitator superfamily associated domain CVS42_RS04140 23d1a83c0361f70e86ff15178e9270d6 384 SUPERFAMILY SSF103473 4 369 1.44E-31 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS04140 23d1a83c0361f70e86ff15178e9270d6 384 Gene3D G3DSA:1.20.1250.20 190 381 2.4E-8 T 29-03-2018 CVS42_RS00535 8e144ca52f2ef29f6cbf1b578ec064f6 65 Pfam PF14001 YdfZ protein 2 65 1.4E-32 T 29-03-2018 IPR017704 Putative selenium-binding protein YdfZ CVS42_RS00535 8e144ca52f2ef29f6cbf1b578ec064f6 65 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 1 65 8.9E-35 T 29-03-2018 IPR017704 Putative selenium-binding protein YdfZ CVS42_RS17000 acc82e658f1b1ca0d3c15c447bbafc78 285 Gene3D G3DSA:1.10.530.10 138 282 1.9E-40 T 29-03-2018 CVS42_RS17000 acc82e658f1b1ca0d3c15c447bbafc78 285 Gene3D G3DSA:1.25.40.10 24 119 2.4E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS17000 acc82e658f1b1ca0d3c15c447bbafc78 285 SUPERFAMILY SSF81901 45 114 1.14E-7 T 29-03-2018 CVS42_RS17000 acc82e658f1b1ca0d3c15c447bbafc78 285 SUPERFAMILY SSF53955 145 280 9.85E-42 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS17000 acc82e658f1b1ca0d3c15c447bbafc78 285 Pfam PF01464 Transglycosylase SLT domain 166 264 2.0E-25 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CVS42_RS03665 e4ab4e59a4a9350269a0180916675769 259 ProSitePatterns PS00893 Nudix box signature. 165 186 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CVS42_RS03665 e4ab4e59a4a9350269a0180916675769 259 Gene3D G3DSA:3.90.79.10 129 258 4.9E-34 T 29-03-2018 CVS42_RS03665 e4ab4e59a4a9350269a0180916675769 259 SUPERFAMILY SSF55811 83 247 1.62E-37 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CVS42_RS03665 e4ab4e59a4a9350269a0180916675769 259 Pfam PF00293 NUDIX domain 133 249 3.3E-15 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CVS42_RS03665 e4ab4e59a4a9350269a0180916675769 259 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 97 121 1.9E-10 T 29-03-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CVS42_RS03665 e4ab4e59a4a9350269a0180916675769 259 SUPERFAMILY SSF55811 4 100 3.85E-18 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CVS42_RS14985 e4dfa33b1303aa94c00bd067debdd789 310 Gene3D G3DSA:3.30.450.20 4 160 9.8E-11 T 29-03-2018 CVS42_RS14985 e4dfa33b1303aa94c00bd067debdd789 310 Gene3D G3DSA:3.30.70.270 161 310 7.1E-52 T 29-03-2018 CVS42_RS14985 e4dfa33b1303aa94c00bd067debdd789 310 SMART SM00267 141 308 1.5E-57 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS14985 e4dfa33b1303aa94c00bd067debdd789 310 Pfam PF00990 Diguanylate cyclase, GGDEF domain 154 304 1.5E-41 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS14985 e4dfa33b1303aa94c00bd067debdd789 310 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 150 308 8.7E-42 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS14985 e4dfa33b1303aa94c00bd067debdd789 310 SUPERFAMILY SSF55073 157 307 3.61E-45 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS14985 e4dfa33b1303aa94c00bd067debdd789 310 SUPERFAMILY SSF55785 39 140 1.1E-8 T 29-03-2018 IPR000014 PAS domain CVS42_RS19005 56059d4571ca4b439a730945c4052742 564 PIRSF PIRSF004862 1 563 2.6E-119 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CVS42_RS19005 56059d4571ca4b439a730945c4052742 564 PRINTS PR01009 Flagellar M-ring protein signature 115 133 2.3E-29 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CVS42_RS19005 56059d4571ca4b439a730945c4052742 564 PRINTS PR01009 Flagellar M-ring protein signature 147 161 2.3E-29 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CVS42_RS19005 56059d4571ca4b439a730945c4052742 564 PRINTS PR01009 Flagellar M-ring protein signature 191 209 2.3E-29 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CVS42_RS19005 56059d4571ca4b439a730945c4052742 564 PRINTS PR01009 Flagellar M-ring protein signature 347 371 2.3E-29 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CVS42_RS19005 56059d4571ca4b439a730945c4052742 564 PRINTS PR01009 Flagellar M-ring protein signature 263 281 2.3E-29 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CVS42_RS19005 56059d4571ca4b439a730945c4052742 564 Pfam PF08345 Flagellar M-ring protein C-terminal 250 416 5.7E-35 T 29-03-2018 IPR013556 Flagellar M-ring C-terminal CVS42_RS19005 56059d4571ca4b439a730945c4052742 564 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 8 559 7.3E-74 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CVS42_RS19005 56059d4571ca4b439a730945c4052742 564 Pfam PF01514 Secretory protein of YscJ/FliF family 24 215 1.7E-63 T 29-03-2018 IPR006182 Secretory protein YscJ/FliF CVS42_RS20415 965b8170c10e835cae595722b01c1d68 333 Gene3D G3DSA:1.10.10.10 2 71 4.1E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS20415 965b8170c10e835cae595722b01c1d68 333 Pfam PF13280 WYL domain 159 330 7.7E-15 T 29-03-2018 IPR026881 WYL domain CVS42_RS01335 1debf08183cb5f86bf88316635a03cc9 277 Gene3D G3DSA:3.40.720.10 1 262 6.3E-34 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CVS42_RS01335 1debf08183cb5f86bf88316635a03cc9 277 SUPERFAMILY SSF53649 2 256 9.16E-45 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CVS42_RS01335 1debf08183cb5f86bf88316635a03cc9 277 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 143 208 1.3E-11 T 29-03-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 CVS42_RS20930 9c31bc8b54d8c09959f023421e67c75e 165 TIGRFAM TIGR03645 glyox_marine: lactoylglutathione lyase family protein 3 163 1.5E-95 T 29-03-2018 IPR019883 Lactoylglutathione lyase CVS42_RS20930 9c31bc8b54d8c09959f023421e67c75e 165 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 149 1.5E-12 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CVS42_RS20930 9c31bc8b54d8c09959f023421e67c75e 165 SUPERFAMILY SSF54593 5 154 7.25E-31 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS20930 9c31bc8b54d8c09959f023421e67c75e 165 Gene3D G3DSA:3.10.180.10 2 163 8.1E-28 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS14895 dd5119666272c59fe93d9a62fe047091 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 257 264 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CVS42_RS14895 dd5119666272c59fe93d9a62fe047091 487 Pfam PF00171 Aldehyde dehydrogenase family 21 480 5.5E-173 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS14895 dd5119666272c59fe93d9a62fe047091 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 285 296 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CVS42_RS14895 dd5119666272c59fe93d9a62fe047091 487 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 32 479 3.1E-206 T 29-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CVS42_RS14895 dd5119666272c59fe93d9a62fe047091 487 SUPERFAMILY SSF53720 8 484 2.75E-173 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CVS42_RS14895 dd5119666272c59fe93d9a62fe047091 487 Gene3D G3DSA:3.40.309.10 277 451 1.7E-75 T 29-03-2018 CVS42_RS14895 dd5119666272c59fe93d9a62fe047091 487 Gene3D G3DSA:3.40.605.10 7 276 3.5E-101 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS14880 9a67e4598c993a221aa4f28d402971ea 82 Pfam PF11730 Protein of unknown function (DUF3297) 11 81 9.8E-37 T 29-03-2018 IPR021724 Protein of unknown function DUF3297 CVS42_RS18690 174a56e59ccad6d7b7e637bfba938780 886 Gene3D G3DSA:3.40.50.970 471 705 1.1E-66 T 29-03-2018 CVS42_RS18690 174a56e59ccad6d7b7e637bfba938780 886 Gene3D G3DSA:3.40.50.920 706 886 6.8E-39 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CVS42_RS18690 174a56e59ccad6d7b7e637bfba938780 886 SUPERFAMILY SSF52922 701 885 9.6E-60 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CVS42_RS18690 174a56e59ccad6d7b7e637bfba938780 886 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 885 0.0 T 29-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CVS42_RS18690 174a56e59ccad6d7b7e637bfba938780 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 112 296 1.9E-6 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CVS42_RS18690 174a56e59ccad6d7b7e637bfba938780 886 PIRSF PIRSF000156 1 886 0.0 T 29-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CVS42_RS18690 174a56e59ccad6d7b7e637bfba938780 886 SUPERFAMILY SSF52518 58 466 1.37E-140 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS18690 174a56e59ccad6d7b7e637bfba938780 886 SUPERFAMILY SSF52518 473 700 5.53E-99 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS18690 174a56e59ccad6d7b7e637bfba938780 886 Gene3D G3DSA:3.40.50.970 56 470 3.8E-85 T 29-03-2018 CVS42_RS16820 2388b86b02ba2185e43ca186d8640a37 222 SUPERFAMILY SSF89155 8 217 4.97E-44 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CVS42_RS16820 2388b86b02ba2185e43ca186d8640a37 222 Pfam PF02613 Nitrate reductase delta subunit 51 181 3.4E-35 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CVS42_RS16820 2388b86b02ba2185e43ca186d8640a37 222 Gene3D G3DSA:1.10.3480.10 1 220 2.1E-44 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CVS42_RS16820 2388b86b02ba2185e43ca186d8640a37 222 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 30.949 T 29-03-2018 IPR023069 Chaperone TorD CVS42_RS18570 e6124a7cbc9f09e1e8e79da67ea6e890 560 Pfam PF00672 HAMP domain 207 245 9.8E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS18570 e6124a7cbc9f09e1e8e79da67ea6e890 560 Gene3D G3DSA:1.10.287.950 315 539 1.5E-49 T 29-03-2018 CVS42_RS18570 e6124a7cbc9f09e1e8e79da67ea6e890 560 Gene3D G3DSA:1.10.287.1060 236 314 3.3E-4 T 29-03-2018 CVS42_RS18570 e6124a7cbc9f09e1e8e79da67ea6e890 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 3.9E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS18570 e6124a7cbc9f09e1e8e79da67ea6e890 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 399 3.9E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS18570 e6124a7cbc9f09e1e8e79da67ea6e890 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 11 36 3.9E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS18570 e6124a7cbc9f09e1e8e79da67ea6e890 560 Pfam PF17200 Single Cache domain 2 39 181 3.5E-28 T 29-03-2018 IPR033480 Single Cache domain 2 CVS42_RS18570 e6124a7cbc9f09e1e8e79da67ea6e890 560 SMART SM01049 36 126 9.5E-22 T 29-03-2018 IPR033480 Single Cache domain 2 CVS42_RS18570 e6124a7cbc9f09e1e8e79da67ea6e890 560 SMART SM00283 274 535 4.6E-70 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS18570 e6124a7cbc9f09e1e8e79da67ea6e890 560 SMART SM00304 260 312 55.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS18570 e6124a7cbc9f09e1e8e79da67ea6e890 560 SMART SM00304 207 259 3.4E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS18570 e6124a7cbc9f09e1e8e79da67ea6e890 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 346 501 3.2E-43 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS18570 e6124a7cbc9f09e1e8e79da67ea6e890 560 Gene3D G3DSA:3.30.450.20 27 192 5.1E-35 T 29-03-2018 CVS42_RS18570 e6124a7cbc9f09e1e8e79da67ea6e890 560 SUPERFAMILY SSF58104 227 536 2.75E-71 T 29-03-2018 CVS42_RS02390 2ac0b7a86e00052b9e32f0556437ffa5 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.167 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CVS42_RS02390 2ac0b7a86e00052b9e32f0556437ffa5 90 PIRSF PIRSF029827 1 90 4.4E-41 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CVS42_RS02390 2ac0b7a86e00052b9e32f0556437ffa5 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 9.0E-33 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CVS42_RS02390 2ac0b7a86e00052b9e32f0556437ffa5 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 7.3E-40 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CVS42_RS02390 2ac0b7a86e00052b9e32f0556437ffa5 90 SUPERFAMILY SSF111148 1 89 4.97E-39 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CVS42_RS02390 2ac0b7a86e00052b9e32f0556437ffa5 90 Gene3D G3DSA:1.10.3880.10 2 89 6.9E-40 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CVS42_RS12425 1d23222f5a974579a706c9e8b4fccee2 587 Pfam PF00005 ABC transporter 359 509 9.1E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS12425 1d23222f5a974579a706c9e8b4fccee2 587 Gene3D G3DSA:1.20.1560.10 1 330 2.0E-66 T 29-03-2018 CVS42_RS12425 1d23222f5a974579a706c9e8b4fccee2 587 SUPERFAMILY SSF90123 11 327 8.63E-74 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CVS42_RS12425 1d23222f5a974579a706c9e8b4fccee2 587 Pfam PF00664 ABC transporter transmembrane region 38 297 8.2E-53 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CVS42_RS12425 1d23222f5a974579a706c9e8b4fccee2 587 SUPERFAMILY SSF52540 332 579 3.15E-94 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS12425 1d23222f5a974579a706c9e8b4fccee2 587 Gene3D G3DSA:3.40.50.300 339 576 8.8E-78 T 29-03-2018 CVS42_RS12425 1d23222f5a974579a706c9e8b4fccee2 587 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 13 581 6.1E-239 T 29-03-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 CVS42_RS12425 1d23222f5a974579a706c9e8b4fccee2 587 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS12425 1d23222f5a974579a706c9e8b4fccee2 587 SMART SM00382 368 555 4.7E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS12430 4cb1002fcf6958846dde967b5f60d298 761 SUPERFAMILY SSF56281 501 725 1.23E-34 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS12430 4cb1002fcf6958846dde967b5f60d298 761 SMART SM00849 513 696 4.1E-4 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS12430 4cb1002fcf6958846dde967b5f60d298 761 Pfam PF03772 Competence protein 229 480 9.2E-62 T 29-03-2018 IPR004477 ComEC/Rec2-related protein CVS42_RS12430 4cb1002fcf6958846dde967b5f60d298 761 Pfam PF00753 Metallo-beta-lactamase superfamily 510 576 5.3E-5 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS12430 4cb1002fcf6958846dde967b5f60d298 761 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 152 718 4.5E-111 T 29-03-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 CVS42_RS12430 4cb1002fcf6958846dde967b5f60d298 761 Gene3D G3DSA:3.60.15.10 500 730 5.2E-18 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS12430 4cb1002fcf6958846dde967b5f60d298 761 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 251 412 2.7E-28 T 29-03-2018 IPR004477 ComEC/Rec2-related protein CVS42_RS12430 4cb1002fcf6958846dde967b5f60d298 761 Pfam PF13567 Domain of unknown function (DUF4131) 47 196 3.8E-8 T 29-03-2018 IPR025405 Domain of unknown function DUF4131 CVS42_RS01725 8b97848ccef13058e96f721843cffd78 31 Pfam PF13683 Integrase core domain 4 23 9.0E-7 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CVS42_RS01725 8b97848ccef13058e96f721843cffd78 31 Gene3D G3DSA:3.30.420.10 2 31 1.0E-4 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS06575 b671e4acae1e37dc17a84e3af7945517 429 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 4 429 33.745 T 29-03-2018 IPR021144 Uncharacterised protein family UPF0597 CVS42_RS06575 b671e4acae1e37dc17a84e3af7945517 429 PIRSF PIRSF006054 1 429 1.2E-171 T 29-03-2018 IPR021144 Uncharacterised protein family UPF0597 CVS42_RS06575 b671e4acae1e37dc17a84e3af7945517 429 Pfam PF03313 Serine dehydratase alpha chain 133 424 1.6E-48 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CVS42_RS06575 b671e4acae1e37dc17a84e3af7945517 429 Gene3D G3DSA:1.10.4100.10 241 394 7.5E-6 T 29-03-2018 CVS42_RS20690 8b8f5dfde03a9f9343797bcacf5809c0 312 Hamap MF_00215 Pantothenate kinase [coaA]. 1 312 183.448 T 29-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CVS42_RS20690 8b8f5dfde03a9f9343797bcacf5809c0 312 Gene3D G3DSA:3.40.50.300 5 312 1.4E-56 T 29-03-2018 CVS42_RS20690 8b8f5dfde03a9f9343797bcacf5809c0 312 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 86 240 6.6E-15 T 29-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 CVS42_RS20690 8b8f5dfde03a9f9343797bcacf5809c0 312 PIRSF PIRSF000545 1 312 9.7E-148 T 29-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CVS42_RS20690 8b8f5dfde03a9f9343797bcacf5809c0 312 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 7 312 1.5E-155 T 29-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CVS42_RS20690 8b8f5dfde03a9f9343797bcacf5809c0 312 SUPERFAMILY SSF52540 3 312 2.17E-76 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS21860 56779aca848a7a7ee3cac29bfbd9abd7 107 Pfam PF00581 Rhodanese-like domain 9 98 4.4E-15 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS21860 56779aca848a7a7ee3cac29bfbd9abd7 107 SMART SM00450 7 102 1.9E-22 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS21860 56779aca848a7a7ee3cac29bfbd9abd7 107 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.256 T 29-03-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CVS42_RS21860 56779aca848a7a7ee3cac29bfbd9abd7 107 SUPERFAMILY SSF52821 1 99 8.38E-30 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS21860 56779aca848a7a7ee3cac29bfbd9abd7 107 Gene3D G3DSA:3.40.250.10 1 106 1.3E-26 T 29-03-2018 IPR001763 Rhodanese-like domain CVS42_RS19380 05262f3a1548e1c19fc5af5d1259c55b 306 Gene3D G3DSA:3.40.50.2300 26 147 3.1E-6 T 29-03-2018 CVS42_RS19380 05262f3a1548e1c19fc5af5d1259c55b 306 Pfam PF04392 ABC transporter substrate binding protein 31 288 3.8E-29 T 29-03-2018 IPR007487 ABC transporter, substrate-binding protein CVS42_RS19380 05262f3a1548e1c19fc5af5d1259c55b 306 Gene3D G3DSA:3.40.50.2300 148 277 5.1E-4 T 29-03-2018 CVS42_RS09680 6890193ffcfd8156351990276274b03b 322 Gene3D G3DSA:1.10.3470.10 39 320 4.1E-39 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CVS42_RS09680 6890193ffcfd8156351990276274b03b 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 9.7E-53 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CVS42_RS14390 d4b8fc26154f7b1c20ef561ab9535feb 259 Gene3D G3DSA:3.90.550.10 1 240 4.5E-34 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS14390 d4b8fc26154f7b1c20ef561ab9535feb 259 SUPERFAMILY SSF53448 1 221 4.5E-41 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS14390 d4b8fc26154f7b1c20ef561ab9535feb 259 Pfam PF00535 Glycosyl transferase family 2 3 121 3.0E-29 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CVS42_RS07195 cc2991aebc6e71a3e0329a08f783db26 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 176 8.3E-34 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CVS42_RS07195 cc2991aebc6e71a3e0329a08f783db26 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 17 151 8.9E-11 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CVS42_RS07195 cc2991aebc6e71a3e0329a08f783db26 189 SUPERFAMILY SSF101327 7 175 3.92E-36 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CVS42_RS04970 823417495515e335fe1c3c46c00a6b92 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 8.7E-127 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CVS42_RS04970 823417495515e335fe1c3c46c00a6b92 315 SMART SM01400 4 121 1.2E-77 T 29-03-2018 CVS42_RS04970 823417495515e335fe1c3c46c00a6b92 315 SUPERFAMILY SSF53271 69 306 4.3E-67 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CVS42_RS04970 823417495515e335fe1c3c46c00a6b92 315 Gene3D G3DSA:3.40.50.2020 1 156 6.3E-67 T 29-03-2018 CVS42_RS04970 823417495515e335fe1c3c46c00a6b92 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 50.015 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CVS42_RS04970 823417495515e335fe1c3c46c00a6b92 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 3.2E-31 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CVS42_RS04970 823417495515e335fe1c3c46c00a6b92 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 29-03-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CVS42_RS04970 823417495515e335fe1c3c46c00a6b92 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 6.7E-50 T 29-03-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CVS42_RS04970 823417495515e335fe1c3c46c00a6b92 315 Gene3D G3DSA:3.40.50.2020 157 307 1.8E-43 T 29-03-2018 CVS42_RS05110 3f6d4db0ec06ca7b4622056f090a56a9 82 Gene3D G3DSA:3.30.70.20 21 45 7.1E-8 T 29-03-2018 CVS42_RS05110 3f6d4db0ec06ca7b4622056f090a56a9 82 SUPERFAMILY SSF54862 4 76 2.42E-19 T 29-03-2018 CVS42_RS05110 3f6d4db0ec06ca7b4622056f090a56a9 82 Gene3D G3DSA:3.30.70.20 46 82 0.0026 T 29-03-2018 CVS42_RS05110 3f6d4db0ec06ca7b4622056f090a56a9 82 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS05110 3f6d4db0ec06ca7b4622056f090a56a9 82 Gene3D G3DSA:3.30.70.20 1 20 0.0013 T 29-03-2018 CVS42_RS05110 3f6d4db0ec06ca7b4622056f090a56a9 82 Pfam PF12838 4Fe-4S dicluster domain 8 57 3.4E-6 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS05225 ad5bd6cd0e9a670fb7394330c30d8ce1 442 SUPERFAMILY SSF53098 50 375 1.37E-24 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS05225 ad5bd6cd0e9a670fb7394330c30d8ce1 442 Pfam PF01609 Transposase DDE domain 125 350 1.4E-25 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CVS42_RS05225 ad5bd6cd0e9a670fb7394330c30d8ce1 442 Pfam PF13006 Insertion element 4 transposase N-terminal 17 107 3.3E-25 T 29-03-2018 IPR024473 Transposase, IS4, N-terminal CVS42_RS05225 ad5bd6cd0e9a670fb7394330c30d8ce1 442 Gene3D G3DSA:3.90.350.10 99 331 1.0E-11 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CVS42_RS02610 8dbf7f18cb0628e916c47a2dc2be316a 236 SUPERFAMILY SSF53335 7 166 1.96E-30 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS02610 8dbf7f18cb0628e916c47a2dc2be316a 236 Pfam PF05175 Methyltransferase small domain 37 132 1.1E-13 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CVS42_RS02610 8dbf7f18cb0628e916c47a2dc2be316a 236 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 110 116 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CVS42_RS02610 8dbf7f18cb0628e916c47a2dc2be316a 236 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 107 119 4.6E-6 T 29-03-2018 CVS42_RS02610 8dbf7f18cb0628e916c47a2dc2be316a 236 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 42 56 4.6E-6 T 29-03-2018 CVS42_RS02610 8dbf7f18cb0628e916c47a2dc2be316a 236 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 137 161 4.6E-6 T 29-03-2018 CVS42_RS02610 8dbf7f18cb0628e916c47a2dc2be316a 236 Gene3D G3DSA:3.40.50.150 2 230 4.5E-33 T 29-03-2018 CVS42_RS02610 8dbf7f18cb0628e916c47a2dc2be316a 236 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 5 236 54.316 T 29-03-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 CVS42_RS15920 be9794b6fc442e3db287adea84e5189b 243 Gene3D G3DSA:3.40.1280.10 74 243 2.3E-54 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CVS42_RS15920 be9794b6fc442e3db287adea84e5189b 243 SUPERFAMILY SSF88697 2 68 1.64E-17 T 29-03-2018 IPR015947 PUA-like domain CVS42_RS15920 be9794b6fc442e3db287adea84e5189b 243 SUPERFAMILY SSF75217 75 242 2.67E-50 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CVS42_RS15920 be9794b6fc442e3db287adea84e5189b 243 Gene3D G3DSA:2.40.240.20 1 73 1.3E-22 T 29-03-2018 CVS42_RS15920 be9794b6fc442e3db287adea84e5189b 243 Pfam PF04452 RNA methyltransferase 20 236 5.3E-71 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CVS42_RS15920 be9794b6fc442e3db287adea84e5189b 243 PIRSF PIRSF015601 3 242 1.7E-53 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CVS42_RS15920 be9794b6fc442e3db287adea84e5189b 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 242 6.4E-81 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CVS42_RS04830 7dc9e81af2306a9207a0c57e93ddb999 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CVS42_RS04830 7dc9e81af2306a9207a0c57e93ddb999 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CVS42_RS04830 7dc9e81af2306a9207a0c57e93ddb999 489 Gene3D G3DSA:3.40.309.10 262 456 1.5E-42 T 29-03-2018 CVS42_RS04830 7dc9e81af2306a9207a0c57e93ddb999 489 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 4 489 58.694 T 29-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 CVS42_RS04830 7dc9e81af2306a9207a0c57e93ddb999 489 Gene3D G3DSA:3.40.605.10 2 261 1.1E-82 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS04830 7dc9e81af2306a9207a0c57e93ddb999 489 SUPERFAMILY SSF53720 6 458 1.7E-128 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CVS42_RS04830 7dc9e81af2306a9207a0c57e93ddb999 489 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 6 489 1.1E-255 T 29-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 CVS42_RS04830 7dc9e81af2306a9207a0c57e93ddb999 489 Pfam PF00171 Aldehyde dehydrogenase family 12 463 4.1E-126 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS21520 f440614be0f4ff57f0c9af56045918be 807 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 801 0.0 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CVS42_RS21520 f440614be0f4ff57f0c9af56045918be 807 PIRSF PIRSF000437 19 806 5.2E-284 T 29-03-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 CVS42_RS21520 f440614be0f4ff57f0c9af56045918be 807 SMART SM00563 304 431 4.4E-26 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CVS42_RS21520 f440614be0f4ff57f0c9af56045918be 807 PIRSF PIRSF500064 4 806 6.6E-296 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CVS42_RS21520 f440614be0f4ff57f0c9af56045918be 807 Pfam PF01553 Acyltransferase 288 427 1.3E-23 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CVS42_RS21520 f440614be0f4ff57f0c9af56045918be 807 SUPERFAMILY SSF69593 241 518 5.36E-27 T 29-03-2018 CVS42_RS21520 f440614be0f4ff57f0c9af56045918be 807 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 805 29.173 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CVS42_RS21520 f440614be0f4ff57f0c9af56045918be 807 Gene3D G3DSA:3.40.1130.10 244 517 1.6E-33 T 29-03-2018 CVS42_RS17050 44ea77ade8fcc81e555bc4fcb726830a 69 SMART SM00357 6 69 3.5E-29 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CVS42_RS17050 44ea77ade8fcc81e555bc4fcb726830a 69 PIRSF PIRSF002599 1 69 5.0E-25 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CVS42_RS17050 44ea77ade8fcc81e555bc4fcb726830a 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 29-03-2018 IPR019844 Cold-shock conserved site CVS42_RS17050 44ea77ade8fcc81e555bc4fcb726830a 69 PRINTS PR00050 Cold shock protein signature 42 60 4.7E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CVS42_RS17050 44ea77ade8fcc81e555bc4fcb726830a 69 PRINTS PR00050 Cold shock protein signature 27 36 4.7E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CVS42_RS17050 44ea77ade8fcc81e555bc4fcb726830a 69 PRINTS PR00050 Cold shock protein signature 7 22 4.7E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CVS42_RS17050 44ea77ade8fcc81e555bc4fcb726830a 69 Gene3D G3DSA:2.40.50.140 4 69 1.2E-27 T 29-03-2018 CVS42_RS17050 44ea77ade8fcc81e555bc4fcb726830a 69 SUPERFAMILY SSF50249 5 68 4.68E-24 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS17050 44ea77ade8fcc81e555bc4fcb726830a 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 7.7E-30 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CVS42_RS09685 8c10df423e7b8cf4c30e0d468a34cab5 509 SMART SM00382 283 477 2.8E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS09685 8c10df423e7b8cf4c30e0d468a34cab5 509 SMART SM00382 35 224 4.6E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS09685 8c10df423e7b8cf4c30e0d468a34cab5 509 SUPERFAMILY SSF52540 272 487 4.28E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09685 8c10df423e7b8cf4c30e0d468a34cab5 509 Gene3D G3DSA:3.40.50.300 1 258 8.1E-54 T 29-03-2018 CVS42_RS09685 8c10df423e7b8cf4c30e0d468a34cab5 509 SUPERFAMILY SSF52540 9 235 7.78E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09685 8c10df423e7b8cf4c30e0d468a34cab5 509 Pfam PF00005 ABC transporter 275 428 2.8E-23 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS09685 8c10df423e7b8cf4c30e0d468a34cab5 509 Pfam PF00005 ABC transporter 27 175 5.1E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS09685 8c10df423e7b8cf4c30e0d468a34cab5 509 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS09685 8c10df423e7b8cf4c30e0d468a34cab5 509 Gene3D G3DSA:3.40.50.300 262 509 1.0E-42 T 29-03-2018 CVS42_RS00920 3beeb8d2c25fd43fcb29bfa615188443 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 33.894 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CVS42_RS00920 3beeb8d2c25fd43fcb29bfa615188443 145 Gene3D G3DSA:3.50.80.10 1 145 2.4E-51 T 29-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain CVS42_RS00920 3beeb8d2c25fd43fcb29bfa615188443 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 3.5E-51 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CVS42_RS00920 3beeb8d2c25fd43fcb29bfa615188443 145 SUPERFAMILY SSF69500 2 144 5.62E-53 T 29-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain CVS42_RS00920 3beeb8d2c25fd43fcb29bfa615188443 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 145 4.2E-63 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CVS42_RS16010 2ca1843afcbc0b7f02cb028140470fa2 153 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 9 149 5.2E-59 T 29-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CVS42_RS16010 2ca1843afcbc0b7f02cb028140470fa2 153 SUPERFAMILY SSF54637 8 149 5.45E-49 T 29-03-2018 IPR029069 HotDog domain CVS42_RS16010 2ca1843afcbc0b7f02cb028140470fa2 153 Pfam PF07977 FabA-like domain 17 145 2.0E-38 T 29-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CVS42_RS16010 2ca1843afcbc0b7f02cb028140470fa2 153 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 152 36.314 T 29-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CVS42_RS16010 2ca1843afcbc0b7f02cb028140470fa2 153 Gene3D G3DSA:3.10.129.10 2 152 5.9E-53 T 29-03-2018 CVS42_RS13410 1419aeddcad7902adf74487fd05b438e 247 PIRSF PIRSF039085 5 247 1.8E-107 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CVS42_RS13410 1419aeddcad7902adf74487fd05b438e 247 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS13410 1419aeddcad7902adf74487fd05b438e 247 Pfam PF00005 ABC transporter 25 172 8.8E-37 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS13410 1419aeddcad7902adf74487fd05b438e 247 Gene3D G3DSA:3.40.50.300 4 246 8.6E-73 T 29-03-2018 CVS42_RS13410 1419aeddcad7902adf74487fd05b438e 247 SMART SM00382 34 220 5.3E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS13410 1419aeddcad7902adf74487fd05b438e 247 SUPERFAMILY SSF52540 8 242 3.59E-79 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09200 4ebe072ffdfb2df9e2fc49d170edfd73 239 Pfam PF04288 MukE-like family 10 234 4.3E-112 T 29-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 CVS42_RS00565 4e481d48f705b124241aea3c30b92c3c 723 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 3.8E-72 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CVS42_RS00565 4e481d48f705b124241aea3c30b92c3c 723 SUPERFAMILY SSF52540 6 642 1.57E-178 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS00565 4e481d48f705b124241aea3c30b92c3c 723 Gene3D G3DSA:3.40.50.300 283 384 8.4E-26 T 29-03-2018 CVS42_RS00565 4e481d48f705b124241aea3c30b92c3c 723 Gene3D G3DSA:3.40.50.300 160 282 3.4E-31 T 29-03-2018 CVS42_RS00565 4e481d48f705b124241aea3c30b92c3c 723 Gene3D G3DSA:3.40.50.300 4 147 2.2E-27 T 29-03-2018 CVS42_RS00565 4e481d48f705b124241aea3c30b92c3c 723 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 6.0E-77 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CVS42_RS00565 4e481d48f705b124241aea3c30b92c3c 723 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 721 0.0 T 29-03-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 CVS42_RS00565 4e481d48f705b124241aea3c30b92c3c 723 Gene3D G3DSA:3.40.50.300 385 674 1.1E-53 T 29-03-2018 CVS42_RS00305 3b678c4364db14c122496bd099df49a1 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 1.1E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS00305 3b678c4364db14c122496bd099df49a1 319 Gene3D G3DSA:3.40.190.10 100 188 3.9E-11 T 29-03-2018 CVS42_RS00305 3b678c4364db14c122496bd099df49a1 319 Gene3D G3DSA:1.10.10.10 2 93 1.7E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS00305 3b678c4364db14c122496bd099df49a1 319 Gene3D G3DSA:3.40.190.10 189 273 6.0E-10 T 29-03-2018 CVS42_RS00305 3b678c4364db14c122496bd099df49a1 319 SUPERFAMILY SSF53850 92 299 4.34E-31 T 29-03-2018 CVS42_RS00305 3b678c4364db14c122496bd099df49a1 319 SUPERFAMILY SSF46785 6 88 4.54E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS00305 3b678c4364db14c122496bd099df49a1 319 Pfam PF03466 LysR substrate binding domain 97 298 1.5E-19 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS00305 3b678c4364db14c122496bd099df49a1 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.2E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS00305 3b678c4364db14c122496bd099df49a1 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.2E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS00305 3b678c4364db14c122496bd099df49a1 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.2E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS17905 b5ca00bb0a4db9c9075400c0ad61cbe9 329 Gene3D G3DSA:3.90.180.10 2 145 2.4E-35 T 29-03-2018 CVS42_RS17905 b5ca00bb0a4db9c9075400c0ad61cbe9 329 SUPERFAMILY SSF51735 123 249 1.2E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS17905 b5ca00bb0a4db9c9075400c0ad61cbe9 329 SUPERFAMILY SSF50129 2 156 2.59E-31 T 29-03-2018 IPR011032 GroES-like CVS42_RS17905 b5ca00bb0a4db9c9075400c0ad61cbe9 329 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 151 172 - T 29-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 CVS42_RS17905 b5ca00bb0a4db9c9075400c0ad61cbe9 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 96 2.0E-8 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CVS42_RS17905 b5ca00bb0a4db9c9075400c0ad61cbe9 329 SMART SM00829 14 319 1.0E-18 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CVS42_RS17905 b5ca00bb0a4db9c9075400c0ad61cbe9 329 Gene3D G3DSA:3.40.50.720 146 304 3.6E-31 T 29-03-2018 CVS42_RS17905 b5ca00bb0a4db9c9075400c0ad61cbe9 329 Pfam PF13602 Zinc-binding dehydrogenase 193 319 3.0E-20 T 29-03-2018 CVS42_RS13385 da98169ebe5bb16ef5d5c7d53d864578 506 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 414 498 8.5E-6 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS13385 da98169ebe5bb16ef5d5c7d53d864578 506 Pfam PF07730 Histidine kinase 306 371 3.2E-12 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CVS42_RS13385 da98169ebe5bb16ef5d5c7d53d864578 506 SMART SM00387 410 500 2.9E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS13385 da98169ebe5bb16ef5d5c7d53d864578 506 Gene3D G3DSA:3.30.565.10 368 506 1.8E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS13385 da98169ebe5bb16ef5d5c7d53d864578 506 SUPERFAMILY SSF55874 386 497 3.54E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS13385 da98169ebe5bb16ef5d5c7d53d864578 506 Pfam PF05231 MASE1 13 278 3.0E-10 T 29-03-2018 IPR007895 MASE1 CVS42_RS01965 158abbebfa8aac3b17da9e15e0ffe13f 248 Gene3D G3DSA:3.40.50.720 1 235 5.5E-57 T 29-03-2018 CVS42_RS01965 158abbebfa8aac3b17da9e15e0ffe13f 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CVS42_RS01965 158abbebfa8aac3b17da9e15e0ffe13f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.0E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS01965 158abbebfa8aac3b17da9e15e0ffe13f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.0E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS01965 158abbebfa8aac3b17da9e15e0ffe13f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.0E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS01965 158abbebfa8aac3b17da9e15e0ffe13f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.0E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS01965 158abbebfa8aac3b17da9e15e0ffe13f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.0E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS01965 158abbebfa8aac3b17da9e15e0ffe13f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 1.0E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS01965 158abbebfa8aac3b17da9e15e0ffe13f 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.0E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS01965 158abbebfa8aac3b17da9e15e0ffe13f 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.0E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS01965 158abbebfa8aac3b17da9e15e0ffe13f 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.0E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS01965 158abbebfa8aac3b17da9e15e0ffe13f 248 Pfam PF00106 short chain dehydrogenase 2 186 2.5E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS01965 158abbebfa8aac3b17da9e15e0ffe13f 248 SUPERFAMILY SSF51735 2 231 2.08E-61 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS05845 f62ac78678a560e2cc20017fc7632485 167 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 20 154 6.5E-40 T 29-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 CVS42_RS05845 f62ac78678a560e2cc20017fc7632485 167 PIRSF PIRSF003165 1 160 1.8E-53 T 29-03-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup CVS42_RS05845 f62ac78678a560e2cc20017fc7632485 167 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 22 45 1.5E-43 T 29-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 CVS42_RS05845 f62ac78678a560e2cc20017fc7632485 167 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 71 93 1.5E-43 T 29-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 CVS42_RS05845 f62ac78678a560e2cc20017fc7632485 167 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 103 125 1.5E-43 T 29-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 CVS42_RS05845 f62ac78678a560e2cc20017fc7632485 167 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 47 66 1.5E-43 T 29-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 CVS42_RS05845 f62ac78678a560e2cc20017fc7632485 167 SUPERFAMILY SSF48452 27 139 8.85E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS05845 f62ac78678a560e2cc20017fc7632485 167 Gene3D G3DSA:1.25.40.10 19 160 3.3E-16 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS05845 f62ac78678a560e2cc20017fc7632485 167 Pfam PF07720 Tetratricopeptide repeat 36 68 0.0037 T 29-03-2018 IPR011716 Tetratricopeptide TPR-3 CVS42_RS06220 7ac5c2876f8e15ee832562b7c74444ba 176 Gene3D G3DSA:2.60.40.1090 24 176 2.0E-25 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CVS42_RS06220 7ac5c2876f8e15ee832562b7c74444ba 176 Pfam PF00419 Fimbrial protein 26 175 5.9E-12 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CVS42_RS06220 7ac5c2876f8e15ee832562b7c74444ba 176 SUPERFAMILY SSF49401 25 176 1.09E-17 T 29-03-2018 IPR008966 Adhesion domain CVS42_RS21155 d7d49c2e490f0be32b6bbde99cc5f010 242 Pfam PF00117 Glutamine amidotransferase class-I 24 191 9.5E-11 T 29-03-2018 IPR017926 Glutamine amidotransferase CVS42_RS21155 d7d49c2e490f0be32b6bbde99cc5f010 242 SUPERFAMILY SSF52317 46 202 4.89E-39 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS21155 d7d49c2e490f0be32b6bbde99cc5f010 242 Gene3D G3DSA:3.40.50.880 19 235 1.4E-33 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS10050 07c3067df9c2ce249fe604e434388f1c 476 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 188 199 - T 29-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS10050 07c3067df9c2ce249fe604e434388f1c 476 Gene3D G3DSA:3.30.70.1170 28 98 2.6E-19 T 29-03-2018 CVS42_RS10050 07c3067df9c2ce249fe604e434388f1c 476 Gene3D G3DSA:3.40.50.150 99 319 2.4E-58 T 29-03-2018 CVS42_RS10050 07c3067df9c2ce249fe604e434388f1c 476 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 474 64.562 T 29-03-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS10050 07c3067df9c2ce249fe604e434388f1c 476 Pfam PF01189 16S rRNA methyltransferase RsmB/F 117 309 9.9E-49 T 29-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS10050 07c3067df9c2ce249fe604e434388f1c 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 189 201 6.2E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS10050 07c3067df9c2ce249fe604e434388f1c 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 293 310 6.2E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS10050 07c3067df9c2ce249fe604e434388f1c 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 6.2E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS10050 07c3067df9c2ce249fe604e434388f1c 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 239 255 6.2E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS10050 07c3067df9c2ce249fe604e434388f1c 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 122 132 6.2E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS10050 07c3067df9c2ce249fe604e434388f1c 476 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 2.9E-26 T 29-03-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 CVS42_RS10050 07c3067df9c2ce249fe604e434388f1c 476 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 420 469 7.3E-13 T 29-03-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CVS42_RS10050 07c3067df9c2ce249fe604e434388f1c 476 SUPERFAMILY SSF53335 7 310 6.1E-63 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS10050 07c3067df9c2ce249fe604e434388f1c 476 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 310 6.7E-95 T 29-03-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 CVS42_RS09060 f83fe53d3563053858ed77d1e0382c8c 67 PIRSF PIRSF037225 1 65 8.5E-24 T 29-03-2018 IPR017143 Uncharacterised conserved protein UCP037225 CVS42_RS09060 f83fe53d3563053858ed77d1e0382c8c 67 Pfam PF14255 Cysteine-rich CPXCG 9 59 8.0E-22 T 29-03-2018 IPR025990 Cysteine-rich CPXCG protein CVS42_RS13545 ff3245c570a1b9f23af3e01f1f1684ea 496 PIRSF PIRSF001267 1 495 7.8E-190 T 29-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CVS42_RS13545 ff3245c570a1b9f23af3e01f1f1684ea 496 Gene3D G3DSA:3.30.420.40 1 118 1.0E-40 T 29-03-2018 CVS42_RS13545 ff3245c570a1b9f23af3e01f1f1684ea 496 SUPERFAMILY SSF53067 5 125 2.69E-37 T 29-03-2018 CVS42_RS13545 ff3245c570a1b9f23af3e01f1f1684ea 496 Gene3D G3DSA:3.30.420.150 119 298 2.0E-34 T 29-03-2018 CVS42_RS13545 ff3245c570a1b9f23af3e01f1f1684ea 496 SUPERFAMILY SSF53067 130 304 3.52E-44 T 29-03-2018 CVS42_RS13545 ff3245c570a1b9f23af3e01f1f1684ea 496 SUPERFAMILY SSF109604 306 494 4.71E-49 T 29-03-2018 CVS42_RS13545 ff3245c570a1b9f23af3e01f1f1684ea 496 Pfam PF02541 Ppx/GppA phosphatase family 19 300 5.2E-83 T 29-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CVS42_RS13545 ff3245c570a1b9f23af3e01f1f1684ea 496 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 6 298 1.3E-99 T 29-03-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 CVS42_RS13590 a8d5c95354d0285710686aabb6133e6f 461 Gene3D G3DSA:2.60.98.20 157 342 1.4E-31 T 29-03-2018 IPR011491 Flagellar hook protein FlgE CVS42_RS13590 a8d5c95354d0285710686aabb6133e6f 461 Pfam PF00460 Flagella basal body rod protein 3 33 5.8E-9 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CVS42_RS13590 a8d5c95354d0285710686aabb6133e6f 461 Pfam PF07559 Flagellar basal body protein FlaE 198 341 1.2E-24 T 29-03-2018 IPR011491 Flagellar hook protein FlgE CVS42_RS13590 a8d5c95354d0285710686aabb6133e6f 461 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CVS42_RS13590 a8d5c95354d0285710686aabb6133e6f 461 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 443 1.6E-100 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CVS42_RS13590 a8d5c95354d0285710686aabb6133e6f 461 SUPERFAMILY SSF117143 80 422 4.97E-74 T 29-03-2018 CVS42_RS13590 a8d5c95354d0285710686aabb6133e6f 461 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 382 460 3.3E-15 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CVS42_RS07940 725c26871cfbca45a95a1f3fb5e49a68 342 SUPERFAMILY SSF52540 34 247 1.18E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS07940 725c26871cfbca45a95a1f3fb5e49a68 342 Gene3D G3DSA:3.40.50.300 21 259 2.7E-16 T 29-03-2018 CVS42_RS07940 725c26871cfbca45a95a1f3fb5e49a68 342 Pfam PF13481 AAA domain 31 196 6.0E-35 T 29-03-2018 CVS42_RS05615 f93d47666335995fa23eeb9a1f8017a0 68 Gene3D G3DSA:1.20.1070.10 1 64 3.1E-4 T 29-03-2018 CVS42_RS05615 f93d47666335995fa23eeb9a1f8017a0 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 4.4E-18 T 29-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CVS42_RS05615 f93d47666335995fa23eeb9a1f8017a0 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 1.6E-20 T 29-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CVS42_RS04905 fb4dc916b63b40caa032ac4eeeb0da10 238 Pfam PF04973 Nicotinamide mononucleotide transporter 25 227 2.3E-52 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CVS42_RS04905 fb4dc916b63b40caa032ac4eeeb0da10 238 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 232 2.3E-56 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CVS42_RS20725 ef782121f972dc3fede57a75e94d6be8 146 Pfam PF04224 Protein of unknown function, DUF417 6 133 8.4E-29 T 29-03-2018 IPR007339 Protein of unknown function DUF417 CVS42_RS20725 ef782121f972dc3fede57a75e94d6be8 146 PIRSF PIRSF028065 1 141 5.5E-50 T 29-03-2018 IPR016865 Inner membrane protein RclC CVS42_RS07125 ba2b673f2fe3abc9b5af3c2a5d9509c2 179 SUPERFAMILY SSF55729 1 161 1.72E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS07125 ba2b673f2fe3abc9b5af3c2a5d9509c2 179 Pfam PF00583 Acetyltransferase (GNAT) family 13 120 7.0E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS07125 ba2b673f2fe3abc9b5af3c2a5d9509c2 179 Gene3D G3DSA:3.40.630.30 1 159 1.0E-16 T 29-03-2018 CVS42_RS18470 e838c34e0117bcb5940303251cc1e526 323 Pfam PF01545 Cation efflux family 28 246 9.1E-41 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CVS42_RS18470 e838c34e0117bcb5940303251cc1e526 323 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 22 320 5.3E-65 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CVS42_RS18470 e838c34e0117bcb5940303251cc1e526 323 Gene3D G3DSA:1.20.1510.10 20 246 1.2E-49 T 29-03-2018 CVS42_RS18470 e838c34e0117bcb5940303251cc1e526 323 SUPERFAMILY SSF161111 179 247 1.28E-50 T 29-03-2018 CVS42_RS18470 e838c34e0117bcb5940303251cc1e526 323 SUPERFAMILY SSF161111 21 151 1.28E-50 T 29-03-2018 CVS42_RS15345 384205b2a676656e8d00841bfd01df7a 202 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 32 160 3.2E-16 T 29-03-2018 CVS42_RS15345 384205b2a676656e8d00841bfd01df7a 202 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.0E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS15345 384205b2a676656e8d00841bfd01df7a 202 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 146 6.0E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS15345 384205b2a676656e8d00841bfd01df7a 202 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 56 67 6.0E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS15345 384205b2a676656e8d00841bfd01df7a 202 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 164 6.0E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS15345 384205b2a676656e8d00841bfd01df7a 202 SUPERFAMILY SSF51735 2 201 7.39E-28 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS15345 384205b2a676656e8d00841bfd01df7a 202 Gene3D G3DSA:3.40.50.720 1 185 5.2E-28 T 29-03-2018 CVS42_RS10455 ced0dfb285b877eac30df3c4e753e743 371 Gene3D G3DSA:1.25.40.10 56 348 1.5E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS10455 ced0dfb285b877eac30df3c4e753e743 371 SUPERFAMILY SSF48452 183 321 1.95E-16 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS10455 ced0dfb285b877eac30df3c4e753e743 371 SUPERFAMILY SSF48371 82 152 3.21E-5 T 29-03-2018 IPR016024 Armadillo-type fold GO:0005488 CVS42_RS14185 8351d7e82fe8ecfd64b17e2548f26865 311 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 300 1.4E-92 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CVS42_RS14185 8351d7e82fe8ecfd64b17e2548f26865 311 Gene3D G3DSA:3.90.245.10 2 311 2.3E-117 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CVS42_RS14185 8351d7e82fe8ecfd64b17e2548f26865 311 SUPERFAMILY SSF53590 4 308 1.96E-106 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CVS42_RS14185 8351d7e82fe8ecfd64b17e2548f26865 311 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 29-03-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 CVS42_RS05695 35439e97a9b28c2271dea6886cef1289 101 Gene3D G3DSA:3.40.50.2300 2 98 2.0E-38 T 29-03-2018 CVS42_RS05695 35439e97a9b28c2271dea6886cef1289 101 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 85 2.4E-33 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CVS42_RS05695 35439e97a9b28c2271dea6886cef1289 101 SUPERFAMILY SSF52794 2 96 4.53E-34 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CVS42_RS05695 35439e97a9b28c2271dea6886cef1289 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 95 1.7E-19 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CVS42_RS14520 49059f12e3b177d5616ef98dbc971427 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 375 394 3.5E-13 T 29-03-2018 IPR003004 GspF/PilC family CVS42_RS14520 49059f12e3b177d5616ef98dbc971427 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 57 69 3.5E-13 T 29-03-2018 IPR003004 GspF/PilC family CVS42_RS14520 49059f12e3b177d5616ef98dbc971427 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 359 373 3.5E-13 T 29-03-2018 IPR003004 GspF/PilC family CVS42_RS14520 49059f12e3b177d5616ef98dbc971427 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 156 184 3.5E-13 T 29-03-2018 IPR003004 GspF/PilC family CVS42_RS14520 49059f12e3b177d5616ef98dbc971427 395 Pfam PF00482 Type II secretion system (T2SS), protein F 62 184 2.0E-24 T 29-03-2018 IPR018076 Type II secretion system F domain CVS42_RS14520 49059f12e3b177d5616ef98dbc971427 395 Pfam PF00482 Type II secretion system (T2SS), protein F 264 384 4.7E-21 T 29-03-2018 IPR018076 Type II secretion system F domain CVS42_RS07685 b45198b2a00a1091f48b35f8ecf90cf4 425 SUPERFAMILY SSF55681 5 319 2.59E-101 T 29-03-2018 CVS42_RS07685 b45198b2a00a1091f48b35f8ecf90cf4 425 Pfam PF13393 Histidyl-tRNA synthetase 10 312 1.2E-46 T 29-03-2018 CVS42_RS07685 b45198b2a00a1091f48b35f8ecf90cf4 425 Gene3D G3DSA:3.40.50.800 325 424 1.9E-14 T 29-03-2018 IPR004154 Anticodon-binding CVS42_RS07685 b45198b2a00a1091f48b35f8ecf90cf4 425 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 422 33.191 T 29-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CVS42_RS07685 b45198b2a00a1091f48b35f8ecf90cf4 425 Gene3D G3DSA:3.30.930.10 2 324 2.4E-72 T 29-03-2018 CVS42_RS07685 b45198b2a00a1091f48b35f8ecf90cf4 425 PIRSF PIRSF001549 2 424 9.2E-122 T 29-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CVS42_RS07685 b45198b2a00a1091f48b35f8ecf90cf4 425 Pfam PF03129 Anticodon binding domain 331 422 5.5E-9 T 29-03-2018 IPR004154 Anticodon-binding CVS42_RS07685 b45198b2a00a1091f48b35f8ecf90cf4 425 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 3.7E-155 T 29-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CVS42_RS07685 b45198b2a00a1091f48b35f8ecf90cf4 425 SUPERFAMILY SSF52954 328 421 2.45E-21 T 29-03-2018 IPR004154 Anticodon-binding CVS42_RS19785 c09518100c9c8488105b08581a191fb8 294 Pfam PF03466 LysR substrate binding domain 89 290 4.7E-46 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS19785 c09518100c9c8488105b08581a191fb8 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.2E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS19785 c09518100c9c8488105b08581a191fb8 294 Gene3D G3DSA:3.40.190.10 92 176 3.6E-15 T 29-03-2018 CVS42_RS19785 c09518100c9c8488105b08581a191fb8 294 SUPERFAMILY SSF53850 90 292 4.25E-40 T 29-03-2018 CVS42_RS19785 c09518100c9c8488105b08581a191fb8 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS19785 c09518100c9c8488105b08581a191fb8 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS19785 c09518100c9c8488105b08581a191fb8 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS19785 c09518100c9c8488105b08581a191fb8 294 Gene3D G3DSA:1.10.10.10 1 91 2.6E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS19785 c09518100c9c8488105b08581a191fb8 294 SUPERFAMILY SSF46785 1 86 4.44E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS19785 c09518100c9c8488105b08581a191fb8 294 Gene3D G3DSA:3.40.190.10 177 265 1.9E-23 T 29-03-2018 CVS42_RS20610 ab947b5344e455db6c029d4d1e8e0473 119 Gene3D G3DSA:3.40.1260.10 1 119 3.1E-24 T 29-03-2018 CVS42_RS20610 ab947b5344e455db6c029d4d1e8e0473 119 SUPERFAMILY SSF75169 3 119 1.06E-36 T 29-03-2018 IPR027396 DsrEFH-like CVS42_RS20610 ab947b5344e455db6c029d4d1e8e0473 119 Pfam PF02635 DsrE/DsrF-like family 3 119 2.5E-27 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CVS42_RS20610 ab947b5344e455db6c029d4d1e8e0473 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 4 119 1.9E-44 T 29-03-2018 IPR017462 Sulphur relay, TusC/DsrF CVS42_RS07425 2ce093dcb33f655906fa302b7c415b98 331 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 323 4.3E-38 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CVS42_RS07425 2ce093dcb33f655906fa302b7c415b98 331 SUPERFAMILY SSF56529 77 326 2.75E-58 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CVS42_RS07425 2ce093dcb33f655906fa302b7c415b98 331 Gene3D G3DSA:3.90.850.10 26 324 1.0E-54 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CVS42_RS15115 eb258a72736e0cf26cc8135d405a1aa4 99 Pfam PF05488 PAAR motif 20 90 9.3E-17 T 29-03-2018 IPR008727 PAAR motif CVS42_RS16440 5195bb5406cfe7f8027dbd317678549d 294 Pfam PF00892 EamA-like transporter family 147 279 1.2E-18 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS16440 5195bb5406cfe7f8027dbd317678549d 294 Pfam PF00892 EamA-like transporter family 13 134 1.6E-7 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS16440 5195bb5406cfe7f8027dbd317678549d 294 SUPERFAMILY SSF103481 183 285 1.11E-12 T 29-03-2018 CVS42_RS16440 5195bb5406cfe7f8027dbd317678549d 294 SUPERFAMILY SSF103481 39 137 8.76E-8 T 29-03-2018 CVS42_RS17245 d3e18cec0f30e263cba616bc775aed2d 62 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 6 60 6.7E-19 T 29-03-2018 IPR019201 Protein of unknown function DUF2065 CVS42_RS12415 a94e17a277b00f56a994fa8f392d2bbc 62 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 3 56 26.557 T 29-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 CVS42_RS12415 a94e17a277b00f56a994fa8f392d2bbc 62 SUPERFAMILY SSF158997 2 58 6.02E-19 T 29-03-2018 CVS42_RS12415 a94e17a277b00f56a994fa8f392d2bbc 62 Gene3D G3DSA:2.20.25.10 10 61 2.0E-17 T 29-03-2018 CVS42_RS12415 a94e17a277b00f56a994fa8f392d2bbc 62 Pfam PF03966 Trm112p-like protein 5 43 2.5E-8 T 29-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 CVS42_RS15200 122e847bc38190ff860faa025d5a9568 84 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 15 70 3.8E-14 T 29-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CVS42_RS15200 122e847bc38190ff860faa025d5a9568 84 Gene3D G3DSA:1.10.10.10 18 82 3.6E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS09895 200bb1baf85f3ebdd625db2e3a868096 118 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 19 27 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CVS42_RS14160 ad89866cfd4ee7696dece7f0545cd5a1 210 Pfam PF01810 LysE type translocator 19 209 3.1E-20 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CVS42_RS14160 ad89866cfd4ee7696dece7f0545cd5a1 210 PIRSF PIRSF006324 5 210 2.3E-42 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CVS42_RS13405 835528162eb3ef779df06efb724c3826 319 SUPERFAMILY SSF161098 117 308 1.96E-48 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS13405 835528162eb3ef779df06efb724c3826 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 311 8.2E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS13405 835528162eb3ef779df06efb724c3826 319 Gene3D G3DSA:1.10.3720.10 8 319 5.0E-54 T 29-03-2018 CVS42_RS13405 835528162eb3ef779df06efb724c3826 319 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 117 210 2.0E-25 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CVS42_RS18220 6945bc9a8f047f8f9d1754276f789336 249 SUPERFAMILY SSF75217 1 244 9.94E-102 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CVS42_RS18220 6945bc9a8f047f8f9d1754276f789336 249 Gene3D G3DSA:1.10.1270.20 170 249 2.9E-32 T 29-03-2018 CVS42_RS18220 6945bc9a8f047f8f9d1754276f789336 249 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 249 118.636 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CVS42_RS18220 6945bc9a8f047f8f9d1754276f789336 249 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 233 2.7E-108 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CVS42_RS18220 6945bc9a8f047f8f9d1754276f789336 249 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 9.1E-69 T 29-03-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CVS42_RS18220 6945bc9a8f047f8f9d1754276f789336 249 PIRSF PIRSF000386 1 247 7.1E-102 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CVS42_RS18220 6945bc9a8f047f8f9d1754276f789336 249 Gene3D G3DSA:3.40.1280.10 1 169 5.4E-75 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CVS42_RS04265 70a3456c63653e192a64e3d163db0fc6 237 Pfam PF02390 Putative methyltransferase 62 231 1.6E-62 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CVS42_RS04265 70a3456c63653e192a64e3d163db0fc6 237 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 22 236 30.726 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CVS42_RS04265 70a3456c63653e192a64e3d163db0fc6 237 SUPERFAMILY SSF53335 14 235 1.74E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS04265 70a3456c63653e192a64e3d163db0fc6 237 Gene3D G3DSA:3.40.50.150 28 237 6.0E-33 T 29-03-2018 CVS42_RS04265 70a3456c63653e192a64e3d163db0fc6 237 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 53 236 2.1E-68 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CVS42_RS21780 ad666c3bc500d6544a118cbf965fc32e 433 Pfam PF12358 Protein of unknown function (DUF3644) 128 195 1.5E-10 T 29-03-2018 IPR022104 Protein of unknown function DUF3644 CVS42_RS21780 ad666c3bc500d6544a118cbf965fc32e 433 Gene3D G3DSA:1.20.120.330 88 196 6.3E-4 T 29-03-2018 CVS42_RS10065 1d1b3fdeace73838a46e5b72f03c7de6 259 Pfam PF01026 TatD related DNase 4 255 4.7E-77 T 29-03-2018 IPR001130 TatD family GO:0016788 CVS42_RS10065 1d1b3fdeace73838a46e5b72f03c7de6 259 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CVS42_RS10065 1d1b3fdeace73838a46e5b72f03c7de6 259 Gene3D G3DSA:3.20.20.140 1 259 5.4E-81 T 29-03-2018 CVS42_RS10065 1d1b3fdeace73838a46e5b72f03c7de6 259 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 255 6.2E-89 T 29-03-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 CVS42_RS10065 1d1b3fdeace73838a46e5b72f03c7de6 259 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CVS42_RS10065 1d1b3fdeace73838a46e5b72f03c7de6 259 PIRSF PIRSF005902 1 259 1.1E-80 T 29-03-2018 IPR001130 TatD family GO:0016788 CVS42_RS10065 1d1b3fdeace73838a46e5b72f03c7de6 259 SUPERFAMILY SSF51556 3 256 7.85E-87 T 29-03-2018 IPR032466 Metal-dependent hydrolase CVS42_RS21485 5e92ab3b7a82b6328abc8b63220511ef 231 SUPERFAMILY SSF46894 127 228 3.12E-24 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS21485 5e92ab3b7a82b6328abc8b63220511ef 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 1.8E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS21485 5e92ab3b7a82b6328abc8b63220511ef 231 Pfam PF00072 Response regulator receiver domain 4 113 6.2E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS21485 5e92ab3b7a82b6328abc8b63220511ef 231 SUPERFAMILY SSF52172 2 125 4.7E-44 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS21485 5e92ab3b7a82b6328abc8b63220511ef 231 SMART SM00862 151 227 9.6E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS21485 5e92ab3b7a82b6328abc8b63220511ef 231 Gene3D G3DSA:1.10.10.10 137 231 1.9E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS21485 5e92ab3b7a82b6328abc8b63220511ef 231 Gene3D G3DSA:3.40.50.2300 2 136 7.5E-42 T 29-03-2018 CVS42_RS21485 5e92ab3b7a82b6328abc8b63220511ef 231 SMART SM00448 2 112 1.6E-46 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS21940 64e830d5a64a2012a743a2c032b09b6b 680 Pfam PF01432 Peptidase family M3 222 677 4.3E-162 T 29-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CVS42_RS21940 64e830d5a64a2012a743a2c032b09b6b 680 SUPERFAMILY SSF55486 1 677 7.45E-213 T 29-03-2018 CVS42_RS21940 64e830d5a64a2012a743a2c032b09b6b 680 Gene3D G3DSA:1.10.1370.10 140 437 2.4E-59 T 29-03-2018 CVS42_RS21940 64e830d5a64a2012a743a2c032b09b6b 680 Gene3D G3DSA:1.10.1370.10 458 680 8.5E-70 T 29-03-2018 CVS42_RS21940 64e830d5a64a2012a743a2c032b09b6b 680 Gene3D G3DSA:1.20.1050.40 5 138 1.1E-35 T 29-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal CVS42_RS15740 3254f5e57ec520ee22ee924854b7f718 275 Pfam PF12146 Serine aminopeptidase, S33 65 183 6.1E-13 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CVS42_RS15740 3254f5e57ec520ee22ee924854b7f718 275 SUPERFAMILY SSF53474 34 252 1.4E-22 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS15740 3254f5e57ec520ee22ee924854b7f718 275 Gene3D G3DSA:3.40.50.1820 5 267 1.7E-20 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS10175 89df4e7f9e4ed2cf8ee61a53b53b0f85 397 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 375 6.2E-106 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS10175 89df4e7f9e4ed2cf8ee61a53b53b0f85 397 PIRSF PIRSF006060 2 59 0.3 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS10175 89df4e7f9e4ed2cf8ee61a53b53b0f85 397 PIRSF PIRSF006060 63 297 4.4E-7 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS10175 89df4e7f9e4ed2cf8ee61a53b53b0f85 397 PIRSF PIRSF006060 300 396 6.2 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS10175 89df4e7f9e4ed2cf8ee61a53b53b0f85 397 PRINTS PR00166 Aromatic amino acid permease signature 81 101 2.6E-74 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS10175 89df4e7f9e4ed2cf8ee61a53b53b0f85 397 PRINTS PR00166 Aromatic amino acid permease signature 311 329 2.6E-74 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS10175 89df4e7f9e4ed2cf8ee61a53b53b0f85 397 PRINTS PR00166 Aromatic amino acid permease signature 180 202 2.6E-74 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS10175 89df4e7f9e4ed2cf8ee61a53b53b0f85 397 PRINTS PR00166 Aromatic amino acid permease signature 277 296 2.6E-74 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS10175 89df4e7f9e4ed2cf8ee61a53b53b0f85 397 PRINTS PR00166 Aromatic amino acid permease signature 37 56 2.6E-74 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS10175 89df4e7f9e4ed2cf8ee61a53b53b0f85 397 PRINTS PR00166 Aromatic amino acid permease signature 146 166 2.6E-74 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS10175 89df4e7f9e4ed2cf8ee61a53b53b0f85 397 PRINTS PR00166 Aromatic amino acid permease signature 10 33 2.6E-74 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS10175 89df4e7f9e4ed2cf8ee61a53b53b0f85 397 PRINTS PR00166 Aromatic amino acid permease signature 219 238 2.6E-74 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS10175 89df4e7f9e4ed2cf8ee61a53b53b0f85 397 PRINTS PR00166 Aromatic amino acid permease signature 332 351 2.6E-74 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CVS42_RS10175 89df4e7f9e4ed2cf8ee61a53b53b0f85 397 Pfam PF03222 Tryptophan/tyrosine permease family 2 385 3.2E-104 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CVS42_RS02165 40afe2c485a2e1ee4524ced79a7f9b37 213 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 16 200 1.0E-63 T 29-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 CVS42_RS02165 40afe2c485a2e1ee4524ced79a7f9b37 213 ProSitePatterns PS00893 Nudix box signature. 98 119 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CVS42_RS02165 40afe2c485a2e1ee4524ced79a7f9b37 213 SUPERFAMILY SSF55811 26 202 1.62E-45 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CVS42_RS02165 40afe2c485a2e1ee4524ced79a7f9b37 213 Gene3D G3DSA:3.90.79.10 3 210 3.4E-39 T 29-03-2018 CVS42_RS02165 40afe2c485a2e1ee4524ced79a7f9b37 213 Pfam PF00293 NUDIX domain 60 182 1.4E-9 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CVS42_RS22180 8237d1feb3da2e165862813893fc6711 698 Gene3D G3DSA:2.40.170.20 174 698 7.1E-75 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS22180 8237d1feb3da2e165862813893fc6711 698 Pfam PF00593 TonB dependent receptor 250 697 2.8E-54 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS22180 8237d1feb3da2e165862813893fc6711 698 SUPERFAMILY SSF56935 38 698 7.59E-121 T 29-03-2018 CVS42_RS22180 8237d1feb3da2e165862813893fc6711 698 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 61 697 5.2E-101 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CVS42_RS22180 8237d1feb3da2e165862813893fc6711 698 Gene3D G3DSA:2.170.130.10 34 171 1.2E-23 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS22180 8237d1feb3da2e165862813893fc6711 698 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 29-03-2018 IPR010916 TonB box, conserved site CVS42_RS22180 8237d1feb3da2e165862813893fc6711 698 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 159 2.2E-14 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS01555 cfdd90904fe6ea3cbd0c9fc01a3b1781 88 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 7 87 1.0E-22 T 29-03-2018 IPR024406 Phage tail assembly chaperone TAC_10 CVS42_RS01555 cfdd90904fe6ea3cbd0c9fc01a3b1781 88 Pfam PF10963 Phage tail assembly chaperone 7 88 1.5E-34 T 29-03-2018 IPR024406 Phage tail assembly chaperone TAC_10 CVS42_RS01555 cfdd90904fe6ea3cbd0c9fc01a3b1781 88 Gene3D G3DSA:3.30.2220.10 3 87 2.6E-20 T 29-03-2018 CVS42_RS17165 ded957ca6bddddf284c896e1e446365b 336 Gene3D G3DSA:3.30.200.20 1 87 9.8E-18 T 29-03-2018 CVS42_RS17165 ded957ca6bddddf284c896e1e446365b 336 Gene3D G3DSA:3.90.1200.10 88 333 2.2E-29 T 29-03-2018 CVS42_RS17165 ded957ca6bddddf284c896e1e446365b 336 SUPERFAMILY SSF56112 8 306 1.75E-41 T 29-03-2018 IPR011009 Protein kinase-like domain CVS42_RS17165 ded957ca6bddddf284c896e1e446365b 336 Pfam PF01636 Phosphotransferase enzyme family 24 241 5.1E-21 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CVS42_RS16195 c6ea05d6b0dcb7e77a63b122a4829928 209 Pfam PF12697 Alpha/beta hydrolase family 16 176 6.9E-7 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS16195 c6ea05d6b0dcb7e77a63b122a4829928 209 Gene3D G3DSA:3.40.50.1820 7 209 8.7E-18 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS16195 c6ea05d6b0dcb7e77a63b122a4829928 209 SUPERFAMILY SSF53474 15 206 2.59E-22 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS04070 5beb226d60d73d96bcb18f9d55c55f44 270 Pfam PF00005 ABC transporter 28 184 1.2E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS04070 5beb226d60d73d96bcb18f9d55c55f44 270 SUPERFAMILY SSF52540 11 244 2.83E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS04070 5beb226d60d73d96bcb18f9d55c55f44 270 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS04070 5beb226d60d73d96bcb18f9d55c55f44 270 SMART SM00382 37 232 8.9E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS04070 5beb226d60d73d96bcb18f9d55c55f44 270 Gene3D G3DSA:3.40.50.300 2 251 2.2E-56 T 29-03-2018 CVS42_RS01740 869a3e6e648ff91f82d3313ea2099bd9 753 Gene3D G3DSA:3.40.1090.10 24 376 4.3E-44 T 29-03-2018 CVS42_RS01740 869a3e6e648ff91f82d3313ea2099bd9 753 SUPERFAMILY SSF52151 30 102 4.71E-49 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CVS42_RS01740 869a3e6e648ff91f82d3313ea2099bd9 753 SUPERFAMILY SSF52151 132 253 4.71E-49 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CVS42_RS01740 869a3e6e648ff91f82d3313ea2099bd9 753 Pfam PF01734 Patatin-like phospholipase 36 226 3.7E-28 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CVS42_RS20665 110a32359cd9c0647e1fb1101d536db7 123 Gene3D G3DSA:1.20.5.1030 66 117 4.8E-18 T 29-03-2018 CVS42_RS20665 110a32359cd9c0647e1fb1101d536db7 123 PRINTS PR01650 Bacterial translocase SecE signature 42 63 1.0E-30 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CVS42_RS20665 110a32359cd9c0647e1fb1101d536db7 123 PRINTS PR01650 Bacterial translocase SecE signature 63 83 1.0E-30 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CVS42_RS20665 110a32359cd9c0647e1fb1101d536db7 123 PRINTS PR01650 Bacterial translocase SecE signature 107 123 1.0E-30 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CVS42_RS20665 110a32359cd9c0647e1fb1101d536db7 123 PRINTS PR01650 Bacterial translocase SecE signature 87 107 1.0E-30 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CVS42_RS20665 110a32359cd9c0647e1fb1101d536db7 123 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 68 120 2.5E-20 T 29-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CVS42_RS20665 110a32359cd9c0647e1fb1101d536db7 123 Hamap MF_00422 Protein translocase subunit SecE [secE]. 65 119 13.104 T 29-03-2018 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CVS42_RS20665 110a32359cd9c0647e1fb1101d536db7 123 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 68 121 1.1E-18 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CVS42_RS20665 110a32359cd9c0647e1fb1101d536db7 123 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 69 97 - T 29-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CVS42_RS19415 556fee884a726841893c90f5a16c534e 172 SUPERFAMILY SSF141452 3 168 7.98E-39 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS19415 556fee884a726841893c90f5a16c534e 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 6.5E-64 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS19415 556fee884a726841893c90f5a16c534e 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 1.3E-31 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS19415 556fee884a726841893c90f5a16c534e 172 Gene3D G3DSA:2.30.110.20 2 172 1.4E-50 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CVS42_RS04710 b9006608e0d2f0f23bc6eb876859a1e6 273 Gene3D G3DSA:2.70.70.10 115 273 1.2E-42 T 29-03-2018 CVS42_RS04710 b9006608e0d2f0f23bc6eb876859a1e6 273 Pfam PF01551 Peptidase family M23 170 264 4.2E-27 T 29-03-2018 IPR016047 Peptidase M23 CVS42_RS04710 b9006608e0d2f0f23bc6eb876859a1e6 273 SUPERFAMILY SSF51261 128 268 1.36E-47 T 29-03-2018 IPR011055 Duplicated hybrid motif CVS42_RS04710 b9006608e0d2f0f23bc6eb876859a1e6 273 Gene3D G3DSA:2.60.40.1590 26 114 5.4E-30 T 29-03-2018 CVS42_RS19075 a1afd8737e5cefaee1b29b9e22534f8c 196 SUPERFAMILY SSF53697 1 191 2.43E-47 T 29-03-2018 CVS42_RS19075 a1afd8737e5cefaee1b29b9e22534f8c 196 Pfam PF13580 SIS domain 8 144 3.9E-31 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CVS42_RS19075 a1afd8737e5cefaee1b29b9e22534f8c 196 Gene3D G3DSA:3.40.50.10490 1 196 1.2E-31 T 29-03-2018 CVS42_RS19025 fe1a81e5e18e9ad362ae2eaeda45a513 378 SUPERFAMILY SSF160544 252 353 6.67E-32 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CVS42_RS19025 fe1a81e5e18e9ad362ae2eaeda45a513 378 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 352 1.5E-110 T 29-03-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 CVS42_RS19025 fe1a81e5e18e9ad362ae2eaeda45a513 378 Gene3D G3DSA:3.40.1690.10 218 353 5.4E-48 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CVS42_RS19025 fe1a81e5e18e9ad362ae2eaeda45a513 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.0E-30 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS19025 fe1a81e5e18e9ad362ae2eaeda45a513 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.0E-30 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS19025 fe1a81e5e18e9ad362ae2eaeda45a513 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.0E-30 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS19025 fe1a81e5e18e9ad362ae2eaeda45a513 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.0E-30 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS19025 fe1a81e5e18e9ad362ae2eaeda45a513 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.0E-30 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS19025 fe1a81e5e18e9ad362ae2eaeda45a513 378 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 3.9E-111 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS02595 d65f3fcf18f60f902b9dcd8258f29233 190 Pfam PF00027 Cyclic nucleotide-binding domain 30 113 7.4E-8 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CVS42_RS02595 d65f3fcf18f60f902b9dcd8258f29233 190 Gene3D G3DSA:2.60.120.10 6 173 2.0E-10 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS02595 d65f3fcf18f60f902b9dcd8258f29233 190 SUPERFAMILY SSF51206 15 129 2.88E-16 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CVS42_RS12095 40ecc1c5fb90df64cd943ffb09f32a7d 134 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 24 121 4.6E-34 T 29-03-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12095 40ecc1c5fb90df64cd943ffb09f32a7d 134 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 5 122 20.638 T 29-03-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 CVS42_RS19960 8e1b8e687d1922ee533c6ba1ee9378ff 359 Pfam PF01594 AI-2E family transporter 14 341 7.5E-37 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like CVS42_RS10730 98f5b275108fe6f445e1e52b225a55be 251 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 183 216 2.4E-7 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS10730 98f5b275108fe6f445e1e52b225a55be 251 SUPERFAMILY SSF51161 85 239 4.71E-31 T 29-03-2018 IPR011004 Trimeric LpxA-like CVS42_RS10730 98f5b275108fe6f445e1e52b225a55be 251 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 190 218 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CVS42_RS10730 98f5b275108fe6f445e1e52b225a55be 251 Gene3D G3DSA:2.160.10.10 88 251 5.7E-30 T 29-03-2018 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 SUPERFAMILY SSF51905 2 313 1.79E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 29-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.6E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 2.6E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.6E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 2.6E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.6E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.6E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 2.6E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 2.6E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 2.6E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 Gene3D G3DSA:3.50.50.60 2 137 9.3E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 2.2E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 4.3E-124 T 29-03-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.1E-39 T 29-03-2018 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 7.1E-39 T 29-03-2018 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 7.1E-39 T 29-03-2018 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 7.1E-39 T 29-03-2018 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 7.1E-39 T 29-03-2018 CVS42_RS11710 fbe2dbf9ff6f095c9ec58f7019c50231 316 Gene3D G3DSA:3.40.50.720 144 316 3.0E-24 T 29-03-2018 CVS42_RS02030 5480f6e4a62e2a135f2316ce29d5c4b0 204 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 6.6E-26 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS02030 5480f6e4a62e2a135f2316ce29d5c4b0 204 PRINTS PR01703 Manganese superoxide dismutase signature 163 175 6.6E-26 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS02030 5480f6e4a62e2a135f2316ce29d5c4b0 204 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 6.6E-26 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS02030 5480f6e4a62e2a135f2316ce29d5c4b0 204 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 6.6E-26 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS02030 5480f6e4a62e2a135f2316ce29d5c4b0 204 PRINTS PR01703 Manganese superoxide dismutase signature 126 134 6.6E-26 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS02030 5480f6e4a62e2a135f2316ce29d5c4b0 204 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 165 172 - T 29-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS02030 5480f6e4a62e2a135f2316ce29d5c4b0 204 Gene3D G3DSA:1.10.287.990 20 90 5.7E-28 T 29-03-2018 CVS42_RS02030 5480f6e4a62e2a135f2316ce29d5c4b0 204 SUPERFAMILY SSF54719 89 202 4.06E-45 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS02030 5480f6e4a62e2a135f2316ce29d5c4b0 204 SUPERFAMILY SSF46609 1 91 3.8E-34 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS02030 5480f6e4a62e2a135f2316ce29d5c4b0 204 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 198 3.3E-39 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS02030 5480f6e4a62e2a135f2316ce29d5c4b0 204 PIRSF PIRSF000349 1 204 5.7E-80 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS02030 5480f6e4a62e2a135f2316ce29d5c4b0 204 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 90 5.7E-29 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CVS42_RS15090 744b6f0830d4e87be6e36803ddb79654 163 Gene3D G3DSA:3.30.1360.100 85 160 6.1E-21 T 29-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain CVS42_RS15090 744b6f0830d4e87be6e36803ddb79654 163 Pfam PF04612 Type II secretion system (T2SS), protein M 2 161 1.7E-48 T 29-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 CVS42_RS15090 744b6f0830d4e87be6e36803ddb79654 163 PIRSF PIRSF006291 1 161 2.4E-45 T 29-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 CVS42_RS15090 744b6f0830d4e87be6e36803ddb79654 163 SUPERFAMILY SSF103054 84 161 9.15E-21 T 29-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain CVS42_RS21375 46e6f54fd6bb42f1978e28d3fd570929 316 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 4 312 1.1E-103 T 29-03-2018 IPR016833 Putative sodium bile acid cotransporter CVS42_RS21375 46e6f54fd6bb42f1978e28d3fd570929 316 PIRSF PIRSF026166 1 316 8.2E-128 T 29-03-2018 IPR016833 Putative sodium bile acid cotransporter CVS42_RS13065 4aad4a46756ed5b63c8708426639d82e 348 SUPERFAMILY SSF51269 283 345 1.23E-16 T 29-03-2018 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 CVS42_RS13065 4aad4a46756ed5b63c8708426639d82e 348 Pfam PF03102 NeuB family 35 272 8.8E-89 T 29-03-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 CVS42_RS13065 4aad4a46756ed5b63c8708426639d82e 348 SMART SM00858 287 345 2.5E-12 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CVS42_RS13065 4aad4a46756ed5b63c8708426639d82e 348 Gene3D G3DSA:3.20.20.70 1 274 2.8E-85 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS13065 4aad4a46756ed5b63c8708426639d82e 348 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 14 339 1.1E-148 T 29-03-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 CVS42_RS13065 4aad4a46756ed5b63c8708426639d82e 348 SUPERFAMILY SSF51569 1 297 4.15E-89 T 29-03-2018 CVS42_RS13065 4aad4a46756ed5b63c8708426639d82e 348 Gene3D G3DSA:3.90.1210.10 278 344 3.0E-23 T 29-03-2018 CVS42_RS13065 4aad4a46756ed5b63c8708426639d82e 348 Pfam PF08666 SAF domain 288 341 6.0E-11 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CVS42_RS00410 91352980480bfc6a9d38f85f87f24684 278 SUPERFAMILY SSF69572 4 260 1.01E-68 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CVS42_RS00410 91352980480bfc6a9d38f85f87f24684 278 Gene3D G3DSA:3.40.50.720 1 266 7.0E-56 T 29-03-2018 CVS42_RS00410 91352980480bfc6a9d38f85f87f24684 278 Pfam PF00899 ThiF family 17 264 6.6E-44 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CVS42_RS19070 a371839dd445714fb701826f39f3adda 130 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 20 130 1.0E-35 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 CVS42_RS19070 a371839dd445714fb701826f39f3adda 130 Gene3D G3DSA:3.40.1350.10 26 130 3.1E-36 T 29-03-2018 CVS42_RS19070 a371839dd445714fb701826f39f3adda 130 Hamap MF_00048 UPF0102 protein YraN [yraN]. 19 130 21.021 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 CVS42_RS19070 a371839dd445714fb701826f39f3adda 130 SUPERFAMILY SSF52980 21 125 2.41E-20 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CVS42_RS19070 a371839dd445714fb701826f39f3adda 130 Pfam PF02021 Uncharacterised protein family UPF0102 27 117 7.4E-28 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 CVS42_RS05605 54c4e9e79f4a86d95712d554fada6b26 222 Pfam PF03379 CcmB protein 6 219 2.9E-87 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05605 54c4e9e79f4a86d95712d554fada6b26 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 2.0E-69 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05605 54c4e9e79f4a86d95712d554fada6b26 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 2.0E-69 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05605 54c4e9e79f4a86d95712d554fada6b26 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 2.0E-69 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05605 54c4e9e79f4a86d95712d554fada6b26 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 2.0E-69 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05605 54c4e9e79f4a86d95712d554fada6b26 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 2.0E-69 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05605 54c4e9e79f4a86d95712d554fada6b26 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 2.0E-69 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CVS42_RS05605 54c4e9e79f4a86d95712d554fada6b26 222 PIRSF PIRSF002764 1 222 1.4E-83 T 29-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CVS42_RS05605 54c4e9e79f4a86d95712d554fada6b26 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 3.6E-88 T 29-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CVS42_RS05655 df4bd682da7635e1483caf7f0f2c4df0 114 SUPERFAMILY SSF52833 1 103 6.66E-34 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS05655 df4bd682da7635e1483caf7f0f2c4df0 114 Gene3D G3DSA:3.40.30.10 1 114 6.1E-29 T 29-03-2018 CVS42_RS05655 df4bd682da7635e1483caf7f0f2c4df0 114 Pfam PF00462 Glutaredoxin 16 80 1.3E-17 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CVS42_RS05655 df4bd682da7635e1483caf7f0f2c4df0 114 PIRSF PIRSF005894 1 107 1.5E-50 T 29-03-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 CVS42_RS05655 df4bd682da7635e1483caf7f0f2c4df0 114 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.7E-45 T 29-03-2018 IPR004480 Monothiol glutaredoxin-related CVS42_RS21345 f481671e45b564de5d6d3b988a97c67c 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 2.6E-42 T 29-03-2018 IPR013527 YicC-like, N-terminal CVS42_RS21345 f481671e45b564de5d6d3b988a97c67c 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.1E-34 T 29-03-2018 IPR013551 Domain of unknown function DUF1732 CVS42_RS21345 f481671e45b564de5d6d3b988a97c67c 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 7.4E-116 T 29-03-2018 IPR005229 Conserved hypothetical protein CHP00255 CVS42_RS13005 aa1bc3b58392898baa2592363945bfb0 479 Pfam PF00534 Glycosyl transferases group 1 309 434 2.3E-28 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CVS42_RS13005 aa1bc3b58392898baa2592363945bfb0 479 Pfam PF13439 Glycosyltransferase Family 4 131 288 1.8E-7 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CVS42_RS13005 aa1bc3b58392898baa2592363945bfb0 479 Gene3D G3DSA:3.40.50.2000 119 297 1.7E-4 T 29-03-2018 CVS42_RS13005 aa1bc3b58392898baa2592363945bfb0 479 Gene3D G3DSA:3.40.50.2000 299 461 2.9E-33 T 29-03-2018 CVS42_RS13005 aa1bc3b58392898baa2592363945bfb0 479 SUPERFAMILY SSF53756 123 478 3.77E-59 T 29-03-2018 CVS42_RS13005 aa1bc3b58392898baa2592363945bfb0 479 Gene3D G3DSA:3.40.50.720 2 97 2.2E-5 T 29-03-2018 CVS42_RS01550 959418f8e2d0bb4f5b7c844c04a98874 684 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 52 392 5.4E-25 T 29-03-2018 IPR010090 Phage tail tape measure protein CVS42_RS01550 959418f8e2d0bb4f5b7c844c04a98874 684 Pfam PF10145 Phage-related minor tail protein 96 287 9.5E-26 T 29-03-2018 IPR010090 Phage tail tape measure protein CVS42_RS09995 185f7881ce37af43c350da9f94ff74bc 213 SUPERFAMILY SSF46689 4 82 8.21E-18 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS09995 185f7881ce37af43c350da9f94ff74bc 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 2.4E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS09995 185f7881ce37af43c350da9f94ff74bc 213 Pfam PF13972 Bacterial transcriptional repressor 62 202 9.1E-40 T 29-03-2018 IPR025722 Bacterial transcriptional repressor TetR CVS42_RS09995 185f7881ce37af43c350da9f94ff74bc 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 7.8E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS09995 185f7881ce37af43c350da9f94ff74bc 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 7.8E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS09995 185f7881ce37af43c350da9f94ff74bc 213 Gene3D G3DSA:1.10.357.10 6 213 5.9E-33 T 29-03-2018 CVS42_RS21225 74a6f392ebe63ba1751aba69978e5d18 443 Pfam PF10117 McrBC 5-methylcytosine restriction system component 59 391 1.2E-90 T 29-03-2018 IPR019292 5-methylcytosine restriction system component CVS42_RS08730 37aa8aa24b9398b76038283841a82777 151 SUPERFAMILY SSF103642 131 151 2.94E-7 T 29-03-2018 CVS42_RS08730 37aa8aa24b9398b76038283841a82777 151 Gene3D G3DSA:3.10.450.50 2 126 4.3E-37 T 29-03-2018 CVS42_RS08730 37aa8aa24b9398b76038283841a82777 151 SUPERFAMILY SSF54427 23 124 6.31E-34 T 29-03-2018 IPR032710 NTF2-like domain CVS42_RS08730 37aa8aa24b9398b76038283841a82777 151 Pfam PF02810 SEC-C motif 134 151 6.3E-9 T 29-03-2018 IPR004027 SEC-C motif CVS42_RS08065 81dbbe6a70c460212a7d5099c254a10d 421 Gene3D G3DSA:3.40.50.620 137 354 2.2E-8 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS08065 81dbbe6a70c460212a7d5099c254a10d 421 SUPERFAMILY SSF52402 140 341 8.79E-6 T 29-03-2018 CVS42_RS01100 4584137175f5c052bbdee3274aed7c26 114 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 1.4E-38 T 29-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CVS42_RS01100 4584137175f5c052bbdee3274aed7c26 114 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 2.8E-47 T 29-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01100 4584137175f5c052bbdee3274aed7c26 114 SUPERFAMILY SSF54843 1 110 5.49E-44 T 29-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CVS42_RS01100 4584137175f5c052bbdee3274aed7c26 114 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 29-03-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01100 4584137175f5c052bbdee3274aed7c26 114 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.123 T 29-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01100 4584137175f5c052bbdee3274aed7c26 114 Gene3D G3DSA:3.90.470.10 1 113 1.2E-45 T 29-03-2018 CVS42_RS09495 5bd011c6d75b9957dda8d5b40a40bc9d 394 Pfam PF01757 Acyltransferase family 11 362 4.2E-25 T 29-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CVS42_RS10850 8a77d38e4861c82736c1e33a509e33af 478 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 476 9.5E-175 T 29-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CVS42_RS10850 8a77d38e4861c82736c1e33a509e33af 478 PIRSF PIRSF006060 1 469 4.9E-51 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS10850 8a77d38e4861c82736c1e33a509e33af 478 Pfam PF13520 Amino acid permease 5 416 7.6E-72 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS10850 8a77d38e4861c82736c1e33a509e33af 478 TIGRFAM TIGR03810 arg_ornith_anti: arginine-ornithine antiporter 3 476 1.0E-181 T 29-03-2018 IPR022461 Arginine/ornithine antiporter GO:0005887|GO:0006527|GO:0043858 CVS42_RS03230 9284ac55f5a82855b55abbb86326a2ab 203 SUPERFAMILY SSF52507 3 199 2.22E-57 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CVS42_RS03230 9284ac55f5a82855b55abbb86326a2ab 203 Pfam PF02441 Flavoprotein 4 179 1.2E-24 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CVS42_RS03230 9284ac55f5a82855b55abbb86326a2ab 203 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 5 198 2.4E-60 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CVS42_RS03230 9284ac55f5a82855b55abbb86326a2ab 203 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 3 200 34.771 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CVS42_RS03230 9284ac55f5a82855b55abbb86326a2ab 203 Gene3D G3DSA:3.40.50.1950 3 203 1.2E-50 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CVS42_RS05025 bce0b87ed4fe2d984853c9b63f9c12ea 246 SUPERFAMILY SSF53850 28 245 4.49E-32 T 29-03-2018 CVS42_RS05025 bce0b87ed4fe2d984853c9b63f9c12ea 246 Gene3D G3DSA:3.40.190.10 21 146 2.2E-11 T 29-03-2018 CVS42_RS05025 bce0b87ed4fe2d984853c9b63f9c12ea 246 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 243 1.6E-14 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS05025 bce0b87ed4fe2d984853c9b63f9c12ea 246 Gene3D G3DSA:3.40.190.10 147 246 4.1E-5 T 29-03-2018 CVS42_RS17465 9a56c19342f14d0d9097563ef83fdfd3 384 Pfam PF12698 ABC-2 family transporter protein 20 357 2.7E-36 T 29-03-2018 CVS42_RS17465 9a56c19342f14d0d9097563ef83fdfd3 384 Gene3D G3DSA:3.40.1710.10 38 192 5.5E-22 T 29-03-2018 CVS42_RS07660 c18c642cbbb4d57c2cabb9112750b35c 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 6.6E-38 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CVS42_RS07660 c18c642cbbb4d57c2cabb9112750b35c 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 6.6E-38 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CVS42_RS07660 c18c642cbbb4d57c2cabb9112750b35c 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 6.6E-38 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CVS42_RS07660 c18c642cbbb4d57c2cabb9112750b35c 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 6.6E-38 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CVS42_RS07660 c18c642cbbb4d57c2cabb9112750b35c 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 6.6E-38 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CVS42_RS07660 c18c642cbbb4d57c2cabb9112750b35c 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.5E-56 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CVS42_RS07660 c18c642cbbb4d57c2cabb9112750b35c 142 SUPERFAMILY SSF54919 1 140 3.4E-59 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CVS42_RS07660 c18c642cbbb4d57c2cabb9112750b35c 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.053 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CVS42_RS07660 c18c642cbbb4d57c2cabb9112750b35c 142 SMART SM00562 3 140 2.0E-88 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CVS42_RS07660 c18c642cbbb4d57c2cabb9112750b35c 142 Gene3D G3DSA:3.30.70.141 56 140 3.4E-34 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CVS42_RS07660 c18c642cbbb4d57c2cabb9112750b35c 142 Gene3D G3DSA:3.30.70.141 1 55 1.5E-16 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CVS42_RS07660 c18c642cbbb4d57c2cabb9112750b35c 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 29-03-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS11420 2e2d53de0de4ed0d83621359fc846a8c 196 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 195 42.116 T 29-03-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 CVS42_RS11420 2e2d53de0de4ed0d83621359fc846a8c 196 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 183 9.0E-32 T 29-03-2018 CVS42_RS11420 2e2d53de0de4ed0d83621359fc846a8c 196 Pfam PF13023 HD domain 11 160 6.9E-17 T 29-03-2018 IPR006674 HD domain CVS42_RS11420 2e2d53de0de4ed0d83621359fc846a8c 196 SMART SM00471 26 151 3.7E-8 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS11420 2e2d53de0de4ed0d83621359fc846a8c 196 SUPERFAMILY SSF109604 4 184 2.69E-46 T 29-03-2018 CVS42_RS11420 2e2d53de0de4ed0d83621359fc846a8c 196 Gene3D G3DSA:1.10.3210.10 1 194 4.6E-49 T 29-03-2018 CVS42_RS04335 870052f15c42581a16ec7dec1ce676e6 511 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 22 511 45.023 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CVS42_RS04335 870052f15c42581a16ec7dec1ce676e6 511 Gene3D G3DSA:2.40.50.140 16 155 3.4E-42 T 29-03-2018 CVS42_RS04335 870052f15c42581a16ec7dec1ce676e6 511 Pfam PF01336 OB-fold nucleic acid binding domain 69 147 2.0E-18 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CVS42_RS04335 870052f15c42581a16ec7dec1ce676e6 511 Pfam PF00152 tRNA synthetases class II (D, K and N) 164 507 2.7E-79 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS04335 870052f15c42581a16ec7dec1ce676e6 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 216 232 3.8E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CVS42_RS04335 870052f15c42581a16ec7dec1ce676e6 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 392 408 3.8E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CVS42_RS04335 870052f15c42581a16ec7dec1ce676e6 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 200 210 3.8E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CVS42_RS04335 870052f15c42581a16ec7dec1ce676e6 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 245 258 3.8E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CVS42_RS04335 870052f15c42581a16ec7dec1ce676e6 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 263 280 3.8E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CVS42_RS04335 870052f15c42581a16ec7dec1ce676e6 511 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 511 1.1E-223 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CVS42_RS04335 870052f15c42581a16ec7dec1ce676e6 511 PIRSF PIRSF039101 2 511 2.5E-205 T 29-03-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CVS42_RS04335 870052f15c42581a16ec7dec1ce676e6 511 SUPERFAMILY SSF55681 163 508 1.93E-117 T 29-03-2018 CVS42_RS04335 870052f15c42581a16ec7dec1ce676e6 511 Gene3D G3DSA:3.30.930.10 173 511 4.1E-99 T 29-03-2018 CVS42_RS04335 870052f15c42581a16ec7dec1ce676e6 511 SUPERFAMILY SSF50249 14 156 2.23E-47 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS11935 8c9f6baa2f51d2cd32b4b0b9cf8e523d 241 SUPERFAMILY SSF55469 1 241 4.71E-75 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CVS42_RS11935 8c9f6baa2f51d2cd32b4b0b9cf8e523d 241 Gene3D G3DSA:3.40.109.10 1 241 1.8E-59 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CVS42_RS11935 8c9f6baa2f51d2cd32b4b0b9cf8e523d 241 PIRSF PIRSF005426 1 241 3.5E-89 T 29-03-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 CVS42_RS11935 8c9f6baa2f51d2cd32b4b0b9cf8e523d 241 Pfam PF00881 Nitroreductase family 8 159 1.6E-18 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CVS42_RS14675 a94ae14649a888bb2e4420bf72a4d8a5 190 PIRSF PIRSF019345 3 182 7.4E-56 T 29-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CVS42_RS14675 a94ae14649a888bb2e4420bf72a4d8a5 190 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 7 172 1.6E-36 T 29-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CVS42_RS14675 a94ae14649a888bb2e4420bf72a4d8a5 190 Gene3D G3DSA:1.10.10.10 88 178 8.5E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS14675 a94ae14649a888bb2e4420bf72a4d8a5 190 SUPERFAMILY SSF46785 87 162 1.56E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS14675 a94ae14649a888bb2e4420bf72a4d8a5 190 Gene3D G3DSA:1.10.10.10 2 87 1.1E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS14675 a94ae14649a888bb2e4420bf72a4d8a5 190 SUPERFAMILY SSF46785 4 84 1.09E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS14675 a94ae14649a888bb2e4420bf72a4d8a5 190 Pfam PF04079 Segregation and condensation complex subunit ScpB 11 171 5.6E-53 T 29-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CVS42_RS11735 f74052d9dc8b7cbec8ed43142602b3d1 72 SUPERFAMILY SSF50249 1 70 3.83E-28 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS11735 f74052d9dc8b7cbec8ed43142602b3d1 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.975 T 29-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CVS42_RS11735 f74052d9dc8b7cbec8ed43142602b3d1 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 7.2E-27 T 29-03-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CVS42_RS11735 f74052d9dc8b7cbec8ed43142602b3d1 72 SMART SM00316 4 72 4.6E-6 T 29-03-2018 IPR022967 RNA-binding domain, S1 CVS42_RS11735 f74052d9dc8b7cbec8ed43142602b3d1 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.2E-37 T 29-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CVS42_RS11735 f74052d9dc8b7cbec8ed43142602b3d1 72 Gene3D G3DSA:2.40.50.140 1 72 2.7E-35 T 29-03-2018 CVS42_RS18765 1de8c17533fe6dabcbddb30b7b4fa22a 301 Gene3D G3DSA:1.20.1170.10 41 183 7.5E-9 T 29-03-2018 CVS42_RS18765 1de8c17533fe6dabcbddb30b7b4fa22a 301 Gene3D G3DSA:2.70.70.10 184 301 2.9E-38 T 29-03-2018 CVS42_RS18765 1de8c17533fe6dabcbddb30b7b4fa22a 301 SUPERFAMILY SSF51261 138 296 5.75E-53 T 29-03-2018 IPR011055 Duplicated hybrid motif CVS42_RS18765 1de8c17533fe6dabcbddb30b7b4fa22a 301 Pfam PF01551 Peptidase family M23 198 292 2.6E-30 T 29-03-2018 IPR016047 Peptidase M23 CVS42_RS02150 c548857cf52118f9ceefa08c6d5082f2 307 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 306 1.4E-122 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CVS42_RS02150 c548857cf52118f9ceefa08c6d5082f2 307 PIRSF PIRSF026649 4 304 2.6E-90 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CVS42_RS02150 c548857cf52118f9ceefa08c6d5082f2 307 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 10 297 3.3E-79 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CVS42_RS02150 c548857cf52118f9ceefa08c6d5082f2 307 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 307 49.486 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CVS42_RS18255 0fc288650888539b233a1f6a72305b85 397 Pfam PF00042 Globin 7 102 9.1E-12 T 29-03-2018 IPR000971 Globin GO:0020037 CVS42_RS18255 0fc288650888539b233a1f6a72305b85 397 Gene3D G3DSA:1.10.490.10 1 159 8.5E-43 T 29-03-2018 CVS42_RS18255 0fc288650888539b233a1f6a72305b85 397 Pfam PF00970 Oxidoreductase FAD-binding domain 159 255 1.6E-10 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CVS42_RS18255 0fc288650888539b233a1f6a72305b85 397 SUPERFAMILY SSF52343 258 394 7.86E-38 T 29-03-2018 CVS42_RS18255 0fc288650888539b233a1f6a72305b85 397 Pfam PF00175 Oxidoreductase NAD-binding domain 266 373 1.2E-15 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CVS42_RS18255 0fc288650888539b233a1f6a72305b85 397 Gene3D G3DSA:2.40.30.10 160 254 2.5E-27 T 29-03-2018 CVS42_RS18255 0fc288650888539b233a1f6a72305b85 397 Gene3D G3DSA:3.40.50.80 255 397 7.9E-25 T 29-03-2018 CVS42_RS18255 0fc288650888539b233a1f6a72305b85 397 SUPERFAMILY SSF46458 2 143 1.46E-39 T 29-03-2018 IPR009050 Globin-like CVS42_RS18255 0fc288650888539b233a1f6a72305b85 397 Hamap MF_01252 Flavohemoprotein [hmp]. 1 397 56.835 T 29-03-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 CVS42_RS18255 0fc288650888539b233a1f6a72305b85 397 PRINTS PR00410 Phenol hydroxylase reductase family signature 265 284 3.4E-10 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CVS42_RS18255 0fc288650888539b233a1f6a72305b85 397 PRINTS PR00410 Phenol hydroxylase reductase family signature 359 367 3.4E-10 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CVS42_RS18255 0fc288650888539b233a1f6a72305b85 397 PRINTS PR00410 Phenol hydroxylase reductase family signature 249 258 3.4E-10 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CVS42_RS18255 0fc288650888539b233a1f6a72305b85 397 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 3.4E-10 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CVS42_RS18255 0fc288650888539b233a1f6a72305b85 397 SUPERFAMILY SSF63380 150 255 1.69E-29 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CVS42_RS02730 edde41cb4183b5a7fa0d654f9a830d89 450 Gene3D G3DSA:3.40.50.150 74 445 9.8E-57 T 29-03-2018 CVS42_RS02730 edde41cb4183b5a7fa0d654f9a830d89 450 SUPERFAMILY SSF50249 4 58 3.37E-10 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS02730 edde41cb4183b5a7fa0d654f9a830d89 450 Pfam PF01938 TRAM domain 4 57 1.9E-7 T 29-03-2018 IPR002792 TRAM domain CVS42_RS02730 edde41cb4183b5a7fa0d654f9a830d89 450 SUPERFAMILY SSF53335 75 444 1.73E-79 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS02730 edde41cb4183b5a7fa0d654f9a830d89 450 Gene3D G3DSA:2.40.50.140 2 73 1.1E-16 T 29-03-2018 CVS42_RS02730 edde41cb4183b5a7fa0d654f9a830d89 450 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 429 439 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site CVS42_RS02730 edde41cb4183b5a7fa0d654f9a830d89 450 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 377 408 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site CVS42_RS02730 edde41cb4183b5a7fa0d654f9a830d89 450 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 15 439 3.6E-131 T 29-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CVS42_RS02730 edde41cb4183b5a7fa0d654f9a830d89 450 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 268 441 1.9E-16 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CVS42_RS07560 435f08da242d490655fc3fec13069262 378 SUPERFAMILY SSF51713 1 364 5.23E-161 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CVS42_RS07560 435f08da242d490655fc3fec13069262 378 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 2.2E-184 T 29-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CVS42_RS07560 435f08da242d490655fc3fec13069262 378 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 2.2E-91 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CVS42_RS07560 435f08da242d490655fc3fec13069262 378 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 368 2.7E-175 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CVS42_RS07560 435f08da242d490655fc3fec13069262 378 Gene3D G3DSA:3.20.20.105 1 368 2.5E-158 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CVS42_RS07560 435f08da242d490655fc3fec13069262 378 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 56.648 T 29-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CVS42_RS12690 ebcece894f2116155cae2039aa1ab6c4 213 Gene3D G3DSA:1.10.1670.10 118 213 1.6E-30 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CVS42_RS12690 ebcece894f2116155cae2039aa1ab6c4 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 29-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CVS42_RS12690 ebcece894f2116155cae2039aa1ab6c4 213 Gene3D G3DSA:1.10.340.30 21 117 1.3E-22 T 29-03-2018 CVS42_RS12690 ebcece894f2116155cae2039aa1ab6c4 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 38.065 T 29-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CVS42_RS12690 ebcece894f2116155cae2039aa1ab6c4 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 6.3E-90 T 29-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CVS42_RS12690 ebcece894f2116155cae2039aa1ab6c4 213 PIRSF PIRSF001435 1 210 4.8E-53 T 29-03-2018 CVS42_RS12690 ebcece894f2116155cae2039aa1ab6c4 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 29-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CVS42_RS12690 ebcece894f2116155cae2039aa1ab6c4 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 5.0E-18 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CVS42_RS12690 ebcece894f2116155cae2039aa1ab6c4 213 Pfam PF00633 Helix-hairpin-helix motif 99 127 3.0E-8 T 29-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CVS42_RS12690 ebcece894f2116155cae2039aa1ab6c4 213 SUPERFAMILY SSF48150 2 207 8.48E-73 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CVS42_RS12690 ebcece894f2116155cae2039aa1ab6c4 213 SMART SM00525 186 206 6.5E-6 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CVS42_RS12690 ebcece894f2116155cae2039aa1ab6c4 213 SMART SM00478 38 185 2.1E-53 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CVS42_RS12690 ebcece894f2116155cae2039aa1ab6c4 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.5E-4 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CVS42_RS21020 98cd06e85707696a35bddfe04a43b5f6 218 Pfam PF01926 50S ribosome-binding GTPase 30 148 8.1E-19 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CVS42_RS21020 98cd06e85707696a35bddfe04a43b5f6 218 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 16 199 27.364 T 29-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CVS42_RS21020 98cd06e85707696a35bddfe04a43b5f6 218 SUPERFAMILY SSF52540 18 199 1.04E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS21020 98cd06e85707696a35bddfe04a43b5f6 218 Gene3D G3DSA:3.40.50.300 9 205 9.0E-26 T 29-03-2018 CVS42_RS21020 98cd06e85707696a35bddfe04a43b5f6 218 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 12 195 4.3E-73 T 29-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CVS42_RS10415 567fb9ae29dfa024159dfb16f41bf236 325 Gene3D G3DSA:3.40.50.300 19 187 2.4E-28 T 29-03-2018 CVS42_RS10415 567fb9ae29dfa024159dfb16f41bf236 325 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 169 2.2E-61 T 29-03-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 CVS42_RS10415 567fb9ae29dfa024159dfb16f41bf236 325 SUPERFAMILY SSF52540 8 218 5.34E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS10415 567fb9ae29dfa024159dfb16f41bf236 325 SUPERFAMILY SSF52540 253 297 5.34E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS10415 567fb9ae29dfa024159dfb16f41bf236 325 PIRSF PIRSF002849 1 325 2.3E-123 T 29-03-2018 CVS42_RS10415 567fb9ae29dfa024159dfb16f41bf236 325 Gene3D G3DSA:1.10.8.300 206 322 1.9E-30 T 29-03-2018 CVS42_RS16175 fdf225361eea5f4eeb3e9f507f24f862 335 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 331 2.8E-111 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CVS42_RS16175 fdf225361eea5f4eeb3e9f507f24f862 335 Gene3D G3DSA:3.40.718.10 1 335 4.4E-140 T 29-03-2018 CVS42_RS16175 fdf225361eea5f4eeb3e9f507f24f862 335 SMART SM01329 5 331 1.5E-190 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CVS42_RS16175 fdf225361eea5f4eeb3e9f507f24f862 335 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 29-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CVS42_RS16175 fdf225361eea5f4eeb3e9f507f24f862 335 SUPERFAMILY SSF53659 3 335 5.58E-130 T 29-03-2018 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 SUPERFAMILY SSF50249 429 540 8.21E-23 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 SUPERFAMILY SSF50249 363 447 6.93E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 SUPERFAMILY SSF50249 88 174 6.19E-13 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 8.9E-234 T 29-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 SUPERFAMILY SSF50249 2 112 1.55E-17 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.4E-97 T 29-03-2018 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.4E-97 T 29-03-2018 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.4E-97 T 29-03-2018 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.4E-97 T 29-03-2018 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.4E-97 T 29-03-2018 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.4E-97 T 29-03-2018 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.4E-97 T 29-03-2018 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.4E-97 T 29-03-2018 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.4E-97 T 29-03-2018 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 SMART SM00316 275 347 6.9E-25 T 29-03-2018 IPR022967 RNA-binding domain, S1 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 SMART SM00316 19 87 5.8E-5 T 29-03-2018 IPR022967 RNA-binding domain, S1 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 SMART SM00316 449 520 2.7E-20 T 29-03-2018 IPR022967 RNA-binding domain, S1 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 SMART SM00316 190 260 7.0E-28 T 29-03-2018 IPR022967 RNA-binding domain, S1 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 SMART SM00316 103 171 7.4E-8 T 29-03-2018 IPR022967 RNA-binding domain, S1 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 SMART SM00316 362 434 9.7E-23 T 29-03-2018 IPR022967 RNA-binding domain, S1 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 Gene3D G3DSA:2.40.50.140 276 348 1.5E-25 T 29-03-2018 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 Gene3D G3DSA:2.40.50.140 361 434 3.6E-21 T 29-03-2018 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 PIRSF PIRSF002111 1 536 6.5E-216 T 29-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 SUPERFAMILY SSF50249 255 369 1.43E-27 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 SUPERFAMILY SSF50249 189 275 1.64E-26 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 Gene3D G3DSA:2.40.50.140 97 177 6.9E-6 T 29-03-2018 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 Gene3D G3DSA:2.40.50.140 182 266 1.3E-25 T 29-03-2018 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 Pfam PF00575 S1 RNA binding domain 19 84 1.1E-6 T 29-03-2018 IPR003029 S1 domain GO:0003676 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 Pfam PF00575 S1 RNA binding domain 449 520 1.7E-15 T 29-03-2018 IPR003029 S1 domain GO:0003676 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 Pfam PF00575 S1 RNA binding domain 190 260 1.2E-21 T 29-03-2018 IPR003029 S1 domain GO:0003676 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 Pfam PF00575 S1 RNA binding domain 278 347 4.1E-19 T 29-03-2018 IPR003029 S1 domain GO:0003676 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 Pfam PF00575 S1 RNA binding domain 105 171 2.1E-7 T 29-03-2018 IPR003029 S1 domain GO:0003676 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 Pfam PF00575 S1 RNA binding domain 361 434 3.7E-21 T 29-03-2018 IPR003029 S1 domain GO:0003676 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 Gene3D G3DSA:2.40.50.140 2 92 3.2E-7 T 29-03-2018 CVS42_RS11895 673c7b4e6ecdb02eca52e6494e9483aa 556 Gene3D G3DSA:2.40.50.140 435 523 1.2E-18 T 29-03-2018 CVS42_RS21930 958628b964d24ae35867e5d2b5252b95 246 SUPERFAMILY SSF53850 17 232 9.78E-35 T 29-03-2018 CVS42_RS21930 958628b964d24ae35867e5d2b5252b95 246 Gene3D G3DSA:3.40.190.10 6 246 9.5E-24 T 29-03-2018 CVS42_RS21930 958628b964d24ae35867e5d2b5252b95 246 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 20 75 6.8E-6 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS21930 958628b964d24ae35867e5d2b5252b95 246 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 99 230 1.0E-12 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS21930 958628b964d24ae35867e5d2b5252b95 246 SMART SM00062 16 231 2.3E-7 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS10590 db8eba08d323c1788872c19d6104e9ab 181 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS10590 db8eba08d323c1788872c19d6104e9ab 181 Gene3D G3DSA:3.30.70.20 78 159 3.1E-9 T 29-03-2018 CVS42_RS10590 db8eba08d323c1788872c19d6104e9ab 181 SUPERFAMILY SSF54862 18 118 2.3E-22 T 29-03-2018 CVS42_RS10590 db8eba08d323c1788872c19d6104e9ab 181 Pfam PF12838 4Fe-4S dicluster domain 39 89 3.5E-12 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS10590 db8eba08d323c1788872c19d6104e9ab 181 Gene3D G3DSA:3.40.50.360 7 50 0.016 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS10590 db8eba08d323c1788872c19d6104e9ab 181 Gene3D G3DSA:3.30.70.20 51 77 3.2E-13 T 29-03-2018 CVS42_RS07000 e21f9edf218b5627530d87bc7c0d3ad2 417 SUPERFAMILY SSF53659 4 417 2.11E-145 T 29-03-2018 CVS42_RS07000 e21f9edf218b5627530d87bc7c0d3ad2 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 29-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CVS42_RS07000 e21f9edf218b5627530d87bc7c0d3ad2 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 417 6.6E-231 T 29-03-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CVS42_RS07000 e21f9edf218b5627530d87bc7c0d3ad2 417 Gene3D G3DSA:3.40.718.10 9 417 2.3E-132 T 29-03-2018 CVS42_RS07000 e21f9edf218b5627530d87bc7c0d3ad2 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 411 2.0E-114 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CVS42_RS07000 e21f9edf218b5627530d87bc7c0d3ad2 417 SMART SM01329 29 413 9.1E-174 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CVS42_RS17490 07aaec34925e1deafaa964ea474dd1e9 293 SUPERFAMILY SSF103481 179 280 9.68E-12 T 29-03-2018 CVS42_RS17490 07aaec34925e1deafaa964ea474dd1e9 293 SUPERFAMILY SSF103481 39 138 3.66E-10 T 29-03-2018 CVS42_RS17490 07aaec34925e1deafaa964ea474dd1e9 293 Pfam PF00892 EamA-like transporter family 5 135 1.5E-13 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS17490 07aaec34925e1deafaa964ea474dd1e9 293 Pfam PF00892 EamA-like transporter family 146 277 1.5E-14 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS17490 07aaec34925e1deafaa964ea474dd1e9 293 Gene3D G3DSA:1.10.287.70 1 201 0.0018 T 29-03-2018 CVS42_RS02120 707001b9f70fcf365feab697a707b7e4 170 Gene3D G3DSA:2.30.30.60 106 158 1.7E-13 T 29-03-2018 CVS42_RS02120 707001b9f70fcf365feab697a707b7e4 170 SUPERFAMILY SSF50182 91 157 4.58E-12 T 29-03-2018 IPR010920 LSM domain CVS42_RS02120 707001b9f70fcf365feab697a707b7e4 170 Pfam PF00924 Mechanosensitive ion channel 46 157 1.8E-13 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CVS42_RS22190 2cc8ad468f49a20d8f4e4a7445612363 254 Pfam PF00005 ABC transporter 18 165 2.5E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS22190 2cc8ad468f49a20d8f4e4a7445612363 254 Gene3D G3DSA:3.40.50.300 1 233 1.9E-53 T 29-03-2018 CVS42_RS22190 2cc8ad468f49a20d8f4e4a7445612363 254 SUPERFAMILY SSF52540 2 231 9.15E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS22190 2cc8ad468f49a20d8f4e4a7445612363 254 SMART SM00382 26 214 2.2E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS00690 fd0e24f498e0fad4e32d9e48cd5f9b28 337 Gene3D G3DSA:3.40.50.720 1 206 2.6E-39 T 29-03-2018 CVS42_RS00690 fd0e24f498e0fad4e32d9e48cd5f9b28 337 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 6.8E-5 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CVS42_RS00690 fd0e24f498e0fad4e32d9e48cd5f9b28 337 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 6.8E-5 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CVS42_RS00690 fd0e24f498e0fad4e32d9e48cd5f9b28 337 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 6.8E-5 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CVS42_RS00690 fd0e24f498e0fad4e32d9e48cd5f9b28 337 Gene3D G3DSA:3.90.25.10 256 336 1.7E-20 T 29-03-2018 CVS42_RS00690 fd0e24f498e0fad4e32d9e48cd5f9b28 337 Gene3D G3DSA:3.90.25.10 207 255 6.2E-12 T 29-03-2018 CVS42_RS00690 fd0e24f498e0fad4e32d9e48cd5f9b28 337 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 1.7E-139 T 29-03-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-70370 CVS42_RS00690 fd0e24f498e0fad4e32d9e48cd5f9b28 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 5.9E-61 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS00690 fd0e24f498e0fad4e32d9e48cd5f9b28 337 SUPERFAMILY SSF51735 1 336 5.51E-97 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS07095 d22ce3ef505083677df47ec3030edf0b 652 Gene3D G3DSA:3.40.390.10 170 386 2.4E-29 T 29-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CVS42_RS07095 d22ce3ef505083677df47ec3030edf0b 652 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 174 365 1.4E-31 T 29-03-2018 CVS42_RS07095 d22ce3ef505083677df47ec3030edf0b 652 Gene3D G3DSA:2.60.40.10 387 513 7.1E-17 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS07095 d22ce3ef505083677df47ec3030edf0b 652 SUPERFAMILY SSF55486 174 380 1.49E-23 T 29-03-2018 CVS42_RS05585 d3c0410231281c2ab6f9c689020bccdb 290 Pfam PF01584 CheW-like domain 151 278 1.1E-14 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS05585 d3c0410231281c2ab6f9c689020bccdb 290 SMART SM00260 147 278 2.4E-5 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS05585 d3c0410231281c2ab6f9c689020bccdb 290 Gene3D G3DSA:2.40.50.180 170 258 8.8E-5 T 29-03-2018 CVS42_RS05585 d3c0410231281c2ab6f9c689020bccdb 290 PIRSF PIRSF020479 18 289 4.0E-74 T 29-03-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like CVS42_RS05585 d3c0410231281c2ab6f9c689020bccdb 290 SUPERFAMILY SSF50341 147 278 2.88E-16 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CVS42_RS15530 63df348bd8f2241af16f92e14f67ccd1 168 Pfam PF00583 Acetyltransferase (GNAT) family 54 143 2.6E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS15530 63df348bd8f2241af16f92e14f67ccd1 168 SUPERFAMILY SSF55729 4 167 1.62E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS15530 63df348bd8f2241af16f92e14f67ccd1 168 Gene3D G3DSA:3.40.630.30 4 167 2.1E-26 T 29-03-2018 CVS42_RS11480 76a0f2d732e56b154ab7df8eee7ec7fe 215 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 213 2.4E-58 T 29-03-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 CVS42_RS11480 76a0f2d732e56b154ab7df8eee7ec7fe 215 SUPERFAMILY SSF53335 1 213 8.68E-51 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS11480 76a0f2d732e56b154ab7df8eee7ec7fe 215 PIRSF PIRSF023956 1 214 4.8E-64 T 29-03-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 CVS42_RS11480 76a0f2d732e56b154ab7df8eee7ec7fe 215 Gene3D G3DSA:3.40.50.150 16 213 3.2E-19 T 29-03-2018 CVS42_RS11480 76a0f2d732e56b154ab7df8eee7ec7fe 215 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 213 34.456 T 29-03-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 CVS42_RS11480 76a0f2d732e56b154ab7df8eee7ec7fe 215 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 211 1.7E-67 T 29-03-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 CVS42_RS18995 5c4cf2386ec5c19aab5ba248089349a5 230 PRINTS PR01003 Flagellar assembly protein FliH signature 52 74 4.6E-6 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CVS42_RS18995 5c4cf2386ec5c19aab5ba248089349a5 230 PRINTS PR01003 Flagellar assembly protein FliH signature 181 197 4.6E-6 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CVS42_RS18995 5c4cf2386ec5c19aab5ba248089349a5 230 PRINTS PR01003 Flagellar assembly protein FliH signature 114 131 4.6E-6 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CVS42_RS18995 5c4cf2386ec5c19aab5ba248089349a5 230 PRINTS PR01003 Flagellar assembly protein FliH signature 75 93 4.6E-6 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CVS42_RS18995 5c4cf2386ec5c19aab5ba248089349a5 230 Pfam PF02108 Flagellar assembly protein FliH 97 216 2.1E-17 T 29-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CVS42_RS07410 50eb3beccc3c405d8b6021a7e9ff5022 227 Pfam PF12710 haloacid dehalogenase-like hydrolase 18 194 1.0E-17 T 29-03-2018 CVS42_RS07410 50eb3beccc3c405d8b6021a7e9ff5022 227 SUPERFAMILY SSF56784 13 196 1.84E-7 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS13645 029804e2ba647bb5933a0aca6ca1178f 299 Pfam PF00892 EamA-like transporter family 4 135 1.2E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS13645 029804e2ba647bb5933a0aca6ca1178f 299 Pfam PF00892 EamA-like transporter family 155 294 9.5E-13 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS13645 029804e2ba647bb5933a0aca6ca1178f 299 SUPERFAMILY SSF103481 208 297 8.37E-12 T 29-03-2018 CVS42_RS13645 029804e2ba647bb5933a0aca6ca1178f 299 SUPERFAMILY SSF103481 36 140 5.23E-13 T 29-03-2018 CVS42_RS07460 8e8cbb7f0a6745417d81953f6d78f659 122 SUPERFAMILY SSF51182 19 117 2.88E-25 T 29-03-2018 IPR011051 RmlC-like cupin domain CVS42_RS07460 8e8cbb7f0a6745417d81953f6d78f659 122 Gene3D G3DSA:2.60.120.10 11 117 6.0E-19 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS07460 8e8cbb7f0a6745417d81953f6d78f659 122 Pfam PF05899 Protein of unknown function (DUF861) 42 114 2.9E-20 T 29-03-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 CVS42_RS12320 edf0fe59745f2a3439d8e886bdc1dc4c 458 Pfam PF09190 DALR domain 340 401 7.6E-26 T 29-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CVS42_RS12320 edf0fe59745f2a3439d8e886bdc1dc4c 458 SUPERFAMILY SSF47323 316 457 2.22E-38 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CVS42_RS12320 edf0fe59745f2a3439d8e886bdc1dc4c 458 SMART SM00840 340 401 1.7E-30 T 29-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CVS42_RS12320 edf0fe59745f2a3439d8e886bdc1dc4c 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 2.3E-29 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CVS42_RS12320 edf0fe59745f2a3439d8e886bdc1dc4c 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 2.3E-29 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CVS42_RS12320 edf0fe59745f2a3439d8e886bdc1dc4c 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 2.3E-29 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CVS42_RS12320 edf0fe59745f2a3439d8e886bdc1dc4c 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 2.3E-29 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CVS42_RS12320 edf0fe59745f2a3439d8e886bdc1dc4c 458 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 457 7.6E-187 T 29-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CVS42_RS12320 edf0fe59745f2a3439d8e886bdc1dc4c 458 SUPERFAMILY SSF52374 1 313 7.24E-103 T 29-03-2018 CVS42_RS12320 edf0fe59745f2a3439d8e886bdc1dc4c 458 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 457 39.171 T 29-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CVS42_RS12320 edf0fe59745f2a3439d8e886bdc1dc4c 458 Gene3D G3DSA:1.20.120.640 306 393 3.6E-21 T 29-03-2018 CVS42_RS12320 edf0fe59745f2a3439d8e886bdc1dc4c 458 Gene3D G3DSA:3.40.50.620 1 305 1.1E-93 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS12320 edf0fe59745f2a3439d8e886bdc1dc4c 458 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 6.4E-137 T 29-03-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CVS42_RS17205 20209a61441b981f5210d5dd7ad54841 141 Gene3D G3DSA:3.10.180.10 5 140 3.4E-21 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS17205 20209a61441b981f5210d5dd7ad54841 141 SUPERFAMILY SSF54593 9 133 1.88E-21 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS17205 20209a61441b981f5210d5dd7ad54841 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 131 3.6E-6 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CVS42_RS20860 8c2d6c665d4fba932ebd1f8ad067fea5 245 SUPERFAMILY SSF64438 2 243 1.19E-87 T 29-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CVS42_RS20860 8c2d6c665d4fba932ebd1f8ad067fea5 245 Gene3D G3DSA:3.60.140.10 1 245 2.6E-95 T 29-03-2018 CVS42_RS20860 8c2d6c665d4fba932ebd1f8ad067fea5 245 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 27 243 4.3E-63 T 29-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase CVS42_RS20860 8c2d6c665d4fba932ebd1f8ad067fea5 245 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 242 6.0E-80 T 29-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase CVS42_RS12075 19a8823db621dd3ad7b35bbb32c82b44 668 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 37 88 1.3E-6 T 29-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CVS42_RS12075 19a8823db621dd3ad7b35bbb32c82b44 668 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 132 385 1.2E-16 T 29-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CVS42_RS12075 19a8823db621dd3ad7b35bbb32c82b44 668 SUPERFAMILY SSF50993 35 396 2.12E-40 T 29-03-2018 CVS42_RS12075 19a8823db621dd3ad7b35bbb32c82b44 668 SUPERFAMILY SSF53474 410 649 6.74E-39 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS12075 19a8823db621dd3ad7b35bbb32c82b44 668 Gene3D G3DSA:2.130.10.120 36 391 2.6E-35 T 29-03-2018 CVS42_RS12075 19a8823db621dd3ad7b35bbb32c82b44 668 Pfam PF00326 Prolyl oligopeptidase family 457 657 3.2E-55 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CVS42_RS12075 19a8823db621dd3ad7b35bbb32c82b44 668 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 582 597 2.6E-35 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CVS42_RS12075 19a8823db621dd3ad7b35bbb32c82b44 668 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 524 544 2.6E-35 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CVS42_RS12075 19a8823db621dd3ad7b35bbb32c82b44 668 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 600 622 2.6E-35 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CVS42_RS12075 19a8823db621dd3ad7b35bbb32c82b44 668 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 439 457 2.6E-35 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CVS42_RS12075 19a8823db621dd3ad7b35bbb32c82b44 668 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 465 489 2.6E-35 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CVS42_RS12075 19a8823db621dd3ad7b35bbb32c82b44 668 Gene3D G3DSA:3.40.50.1820 392 667 1.2E-47 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS18360 05fc81192a2c84b6325ff9c01e94c055 183 Pfam PF02325 YGGT family 9 76 3.4E-21 T 29-03-2018 IPR003425 CCB3/YggT GO:0016020 CVS42_RS18360 05fc81192a2c84b6325ff9c01e94c055 183 Pfam PF02325 YGGT family 107 172 3.8E-19 T 29-03-2018 IPR003425 CCB3/YggT GO:0016020 CVS42_RS21530 02da414a83d4c2a7bb2d43ce413e169b 178 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 13 174 22.53 T 29-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 CVS42_RS21530 02da414a83d4c2a7bb2d43ce413e169b 178 Pfam PF04345 Chorismate lyase 15 175 3.4E-30 T 29-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 CVS42_RS21530 02da414a83d4c2a7bb2d43ce413e169b 178 Gene3D G3DSA:3.40.1410.10 14 173 1.1E-35 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CVS42_RS21530 02da414a83d4c2a7bb2d43ce413e169b 178 SUPERFAMILY SSF64288 13 171 1.57E-33 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CVS42_RS10325 4675db5c64efee7ae352d62fed68767b 300 Gene3D G3DSA:3.40.50.410 60 154 5.3E-9 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS10325 4675db5c64efee7ae352d62fed68767b 300 Pfam PF01882 Protein of unknown function DUF58 48 129 3.1E-22 T 29-03-2018 IPR002881 Domain of unknown function DUF58 CVS42_RS04835 ad57db69d87964135e5a85bfaec2a86d 265 Pfam PF07063 Domain of unknown function (DUF1338) 36 262 3.4E-46 T 29-03-2018 IPR009770 Domain of unknown function DUF1338 CVS42_RS04835 ad57db69d87964135e5a85bfaec2a86d 265 SMART SM01150 5 263 2.3E-119 T 29-03-2018 IPR009770 Domain of unknown function DUF1338 CVS42_RS16055 918739544d24049c8b3febb4d47b4115 244 PIRSF PIRSF005650 4 244 7.4E-89 T 29-03-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 CVS42_RS16055 918739544d24049c8b3febb4d47b4115 244 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.078 T 29-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CVS42_RS16055 918739544d24049c8b3febb4d47b4115 244 Gene3D G3DSA:3.40.1160.10 2 241 3.2E-44 T 29-03-2018 CVS42_RS16055 918739544d24049c8b3febb4d47b4115 244 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.1E-102 T 29-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CVS42_RS16055 918739544d24049c8b3febb4d47b4115 244 Pfam PF00696 Amino acid kinase family 11 219 1.3E-28 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS16055 918739544d24049c8b3febb4d47b4115 244 SUPERFAMILY SSF53633 7 240 6.81E-72 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS02445 a812ca025aaadd18d630134cc92ddb64 588 PIRSF PIRSF028304 1 588 4.6E-182 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like CVS42_RS02445 a812ca025aaadd18d630134cc92ddb64 588 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 3 588 3.6E-204 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like CVS42_RS02445 a812ca025aaadd18d630134cc92ddb64 588 Pfam PF05947 Type VI secretion system, TssF 5 586 3.1E-195 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like CVS42_RS13425 2505bb5d9ea8eec6378cacec5ed00d9f 471 PIRSF PIRSF006060 1 440 2.4E-48 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS13425 2505bb5d9ea8eec6378cacec5ed00d9f 471 Pfam PF13520 Amino acid permease 6 416 1.5E-71 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS13425 2505bb5d9ea8eec6378cacec5ed00d9f 471 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 468 2.3E-157 T 29-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CVS42_RS01035 59335f8ac3854f2dbc67e8e6e757116e 252 Pfam PF12118 SprA-related family 20 215 3.7E-46 T 29-03-2018 IPR021973 SprA-related family CVS42_RS10570 92f70836747eb76476f938a66e35cb20 221 Gene3D G3DSA:3.30.70.20 1 19 8.6E-4 T 29-03-2018 CVS42_RS10570 92f70836747eb76476f938a66e35cb20 221 Gene3D G3DSA:3.30.70.20 55 85 1.0E-9 T 29-03-2018 CVS42_RS10570 92f70836747eb76476f938a66e35cb20 221 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CVS42_RS10570 92f70836747eb76476f938a66e35cb20 221 Pfam PF00037 4Fe-4S binding domain 76 98 5.1E-9 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS10570 92f70836747eb76476f938a66e35cb20 221 Gene3D G3DSA:3.30.70.20 86 207 4.9E-18 T 29-03-2018 CVS42_RS10570 92f70836747eb76476f938a66e35cb20 221 Pfam PF12837 4Fe-4S binding domain 5 24 2.1E-5 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS10570 92f70836747eb76476f938a66e35cb20 221 SUPERFAMILY SSF54862 1 101 3.24E-38 T 29-03-2018 CVS42_RS10570 92f70836747eb76476f938a66e35cb20 221 SUPERFAMILY SSF54862 144 188 3.24E-38 T 29-03-2018 CVS42_RS10570 92f70836747eb76476f938a66e35cb20 221 Gene3D G3DSA:3.30.70.20 20 54 4.1E-9 T 29-03-2018 CVS42_RS10570 92f70836747eb76476f938a66e35cb20 221 Pfam PF12798 4Fe-4S binding domain 151 171 0.083 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CVS42_RS00100 40abea857ea57b37cbe00ccb4eaf83d7 416 Gene3D G3DSA:3.90.1150.10 293 412 8.7E-17 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS00100 40abea857ea57b37cbe00ccb4eaf83d7 416 Gene3D G3DSA:3.40.640.10 69 292 1.0E-35 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS00100 40abea857ea57b37cbe00ccb4eaf83d7 416 SUPERFAMILY SSF53383 16 411 2.61E-61 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS00100 40abea857ea57b37cbe00ccb4eaf83d7 416 Pfam PF00155 Aminotransferase class I and II 64 402 9.3E-24 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CVS42_RS09040 9ccb4cd6fa6b3ce78d9e25b6792d6099 459 Pfam PF01554 MatE 17 176 2.5E-34 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS09040 9ccb4cd6fa6b3ce78d9e25b6792d6099 459 Pfam PF01554 MatE 243 403 8.5E-37 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS09040 9ccb4cd6fa6b3ce78d9e25b6792d6099 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 8.8E-112 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS09040 9ccb4cd6fa6b3ce78d9e25b6792d6099 459 PIRSF PIRSF006603 6 451 7.4E-64 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS10445 f8a1285ac49e6fed7730d2b4bf563bc4 311 Gene3D G3DSA:1.10.10.10 4 87 1.9E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS10445 f8a1285ac49e6fed7730d2b4bf563bc4 311 Gene3D G3DSA:3.40.190.10 95 185 9.6E-11 T 29-03-2018 CVS42_RS10445 f8a1285ac49e6fed7730d2b4bf563bc4 311 Pfam PF03466 LysR substrate binding domain 96 298 8.8E-19 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS10445 f8a1285ac49e6fed7730d2b4bf563bc4 311 Gene3D G3DSA:3.40.190.10 186 256 1.6E-9 T 29-03-2018 CVS42_RS10445 f8a1285ac49e6fed7730d2b4bf563bc4 311 SUPERFAMILY SSF46785 5 85 3.63E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS10445 f8a1285ac49e6fed7730d2b4bf563bc4 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 2.5E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS10445 f8a1285ac49e6fed7730d2b4bf563bc4 311 SUPERFAMILY SSF53850 91 298 2.35E-37 T 29-03-2018 CVS42_RS10445 f8a1285ac49e6fed7730d2b4bf563bc4 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 4.6E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS10445 f8a1285ac49e6fed7730d2b4bf563bc4 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 4.6E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS10445 f8a1285ac49e6fed7730d2b4bf563bc4 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 4.6E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS10445 f8a1285ac49e6fed7730d2b4bf563bc4 311 Gene3D G3DSA:3.40.190.10 257 305 3.7E-5 T 29-03-2018 CVS42_RS08975 b69385e733589733dfb19a31afcdd6e3 173 Pfam PF02600 Disulfide bond formation protein DsbB 12 160 1.3E-45 T 29-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CVS42_RS08975 b69385e733589733dfb19a31afcdd6e3 173 Gene3D G3DSA:1.20.1550.10 1 171 3.1E-49 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain CVS42_RS08975 b69385e733589733dfb19a31afcdd6e3 173 SUPERFAMILY SSF158442 15 160 6.8E-45 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain CVS42_RS08975 b69385e733589733dfb19a31afcdd6e3 173 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 168 22.564 T 29-03-2018 IPR022920 Disulphide bond formation protein DsbB CVS42_RS13110 86e0d522a58bdfd6cc8f53009468396c 668 Gene3D G3DSA:3.90.1480.10 266 533 4.5E-42 T 29-03-2018 CVS42_RS13110 86e0d522a58bdfd6cc8f53009468396c 668 Pfam PF01973 Protein of unknown function DUF115 274 429 7.2E-32 T 29-03-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like CVS42_RS09900 eecc0d2acabaad1263d7f5bb46658ef3 683 Gene3D G3DSA:3.90.1150.10 228 339 0.033 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS09900 eecc0d2acabaad1263d7f5bb46658ef3 683 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 186 442 2.0E-64 T 29-03-2018 IPR008766 Replication gene A protein GO:0006260 CVS42_RS09595 ff29b67e4ec0a686a0a33c13f93c936f 217 SMART SM00671 116 151 1.7E-10 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS09595 ff29b67e4ec0a686a0a33c13f93c936f 217 SMART SM00671 152 187 0.0019 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS09595 ff29b67e4ec0a686a0a33c13f93c936f 217 SMART SM00671 80 115 3.4E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS09595 ff29b67e4ec0a686a0a33c13f93c936f 217 Gene3D G3DSA:2.60.40.1180 55 136 5.2E-20 T 29-03-2018 CVS42_RS09595 ff29b67e4ec0a686a0a33c13f93c936f 217 Gene3D G3DSA:2.60.40.1180 137 205 1.3E-13 T 29-03-2018 CVS42_RS09595 ff29b67e4ec0a686a0a33c13f93c936f 217 Pfam PF08238 Sel1 repeat 117 151 4.6E-9 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS09595 ff29b67e4ec0a686a0a33c13f93c936f 217 Pfam PF08238 Sel1 repeat 153 187 0.0041 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS09595 ff29b67e4ec0a686a0a33c13f93c936f 217 Pfam PF08238 Sel1 repeat 80 115 5.7E-4 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS09595 ff29b67e4ec0a686a0a33c13f93c936f 217 SUPERFAMILY SSF81901 55 195 1.03E-30 T 29-03-2018 CVS42_RS18545 95e9cb844d09c909263b5ae8ddd39cae 297 Pfam PF14488 Domain of unknown function (DUF4434) 25 190 7.6E-22 T 29-03-2018 IPR027849 Protein of unknown function DUF4434 CVS42_RS18545 95e9cb844d09c909263b5ae8ddd39cae 297 Gene3D G3DSA:3.20.20.80 32 262 2.1E-8 T 29-03-2018 CVS42_RS18545 95e9cb844d09c909263b5ae8ddd39cae 297 SUPERFAMILY SSF51445 40 212 1.58E-6 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS18825 5fd390fd69d6c14c9c7217c198076f04 584 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 220 9.1E-15 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CVS42_RS18825 5fd390fd69d6c14c9c7217c198076f04 584 SUPERFAMILY SSF56601 235 564 3.22E-90 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CVS42_RS18825 5fd390fd69d6c14c9c7217c198076f04 584 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 551 8.0E-78 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CVS42_RS18825 5fd390fd69d6c14c9c7217c198076f04 584 Gene3D G3DSA:3.90.1310.10 37 235 1.5E-44 T 29-03-2018 CVS42_RS18825 5fd390fd69d6c14c9c7217c198076f04 584 Gene3D G3DSA:3.40.710.10 236 581 2.1E-84 T 29-03-2018 CVS42_RS18825 5fd390fd69d6c14c9c7217c198076f04 584 SUPERFAMILY SSF56519 63 234 1.57E-42 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 SMART SM00671 150 182 9.2 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 SMART SM00671 380 415 0.016 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 SMART SM00671 183 218 0.0057 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 SMART SM00671 79 114 2.2E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 SMART SM00671 38 69 12.0 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 SMART SM00671 115 149 9.7 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 SMART SM00671 344 379 5.8E-4 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 SMART SM00671 312 343 37.0 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 SMART SM00671 247 282 0.12 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 SUPERFAMILY SSF81901 80 224 2.16E-24 T 29-03-2018 CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 SUPERFAMILY SSF81901 230 418 3.31E-31 T 29-03-2018 CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 Gene3D G3DSA:2.60.40.1180 46 133 1.2E-13 T 29-03-2018 CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 Gene3D G3DSA:2.60.40.1180 227 291 3.1E-7 T 29-03-2018 CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 Gene3D G3DSA:2.60.40.1180 319 456 1.6E-20 T 29-03-2018 CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 Gene3D G3DSA:2.60.40.1180 169 226 3.3E-12 T 29-03-2018 CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 Gene3D G3DSA:2.60.40.1180 134 168 0.003 T 29-03-2018 CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 Pfam PF08238 Sel1 repeat 382 414 4.9E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 Pfam PF08238 Sel1 repeat 150 182 0.028 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 Pfam PF08238 Sel1 repeat 117 149 0.0038 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 Pfam PF08238 Sel1 repeat 247 282 7.3E-4 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 Pfam PF08238 Sel1 repeat 345 379 0.46 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 Pfam PF08238 Sel1 repeat 80 114 2.2E-6 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 Pfam PF08238 Sel1 repeat 184 216 0.0096 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 Pfam PF08238 Sel1 repeat 51 66 2.7 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS15105 38116df0e3af3a91c39b4c1f06ac802d 456 Pfam PF08238 Sel1 repeat 300 310 14.0 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS18100 da6a5624611610695dc13f6da1d62409 133 SUPERFAMILY SSF54523 5 121 2.35E-25 T 29-03-2018 CVS42_RS18100 da6a5624611610695dc13f6da1d62409 133 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 26 113 4.7E-20 T 29-03-2018 IPR031982 Type IV minor pilin ComP CVS42_RS18100 da6a5624611610695dc13f6da1d62409 133 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS18100 da6a5624611610695dc13f6da1d62409 133 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 5.8E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS18100 da6a5624611610695dc13f6da1d62409 133 Gene3D G3DSA:3.30.700.10 5 132 7.7E-25 T 29-03-2018 CVS42_RS18100 da6a5624611610695dc13f6da1d62409 133 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 1.9E-10 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS20645 2e3c93275d37ab80737f93bdca2a7de3 166 SUPERFAMILY SSF160369 5 161 3.14E-49 T 29-03-2018 CVS42_RS20645 2e3c93275d37ab80737f93bdca2a7de3 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 29-03-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS20645 2e3c93275d37ab80737f93bdca2a7de3 166 Pfam PF00466 Ribosomal protein L10 6 101 4.8E-27 T 29-03-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CVS42_RS20645 2e3c93275d37ab80737f93bdca2a7de3 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 27.112 T 29-03-2018 IPR022973 Ribosomal protein L10 CVS42_RS15410 d559ed4791be8228965f547616e1aa21 291 Gene3D G3DSA:3.40.1090.10 1 274 3.9E-41 T 29-03-2018 CVS42_RS15410 d559ed4791be8228965f547616e1aa21 291 Pfam PF01734 Patatin-like phospholipase 9 167 5.2E-20 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CVS42_RS15410 d559ed4791be8228965f547616e1aa21 291 SUPERFAMILY SSF52151 4 282 2.12E-59 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CVS42_RS20335 bb73e1be082f951a549c9dc72fcf9d37 307 Gene3D G3DSA:3.40.50.1100 159 297 3.3E-10 T 29-03-2018 CVS42_RS20335 bb73e1be082f951a549c9dc72fcf9d37 307 Gene3D G3DSA:3.40.50.1100 49 158 2.7E-25 T 29-03-2018 CVS42_RS20335 bb73e1be082f951a549c9dc72fcf9d37 307 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 13 293 3.7E-22 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CVS42_RS20335 bb73e1be082f951a549c9dc72fcf9d37 307 PIRSF PIRSF006278 10 307 9.0E-78 T 29-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CVS42_RS20335 bb73e1be082f951a549c9dc72fcf9d37 307 SUPERFAMILY SSF53686 13 302 8.35E-60 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CVS42_RS10220 4f51b49eadcfbceaf48c3cbee4b804db 174 Pfam PF01713 Smr domain 96 170 1.3E-18 T 29-03-2018 IPR002625 Smr domain CVS42_RS10220 4f51b49eadcfbceaf48c3cbee4b804db 174 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 172 36.941 T 29-03-2018 IPR022990 Uncharacterised protein family UPF0115 CVS42_RS10220 4f51b49eadcfbceaf48c3cbee4b804db 174 SUPERFAMILY SSF160443 93 170 3.66E-11 T 29-03-2018 IPR002625 Smr domain CVS42_RS10220 4f51b49eadcfbceaf48c3cbee4b804db 174 SMART SM00463 93 171 3.1E-18 T 29-03-2018 IPR002625 Smr domain CVS42_RS04890 b6bd9bf9df2c8d9ca18f1cd79e873c36 108 SMART SM01022 9 107 2.2E-33 T 29-03-2018 IPR007374 ASCH domain CVS42_RS04890 b6bd9bf9df2c8d9ca18f1cd79e873c36 108 PIRSF PIRSF029143 4 108 4.8E-40 T 29-03-2018 IPR008314 Uncharacterised conserved protein UCP029143 CVS42_RS04890 b6bd9bf9df2c8d9ca18f1cd79e873c36 108 Pfam PF04266 ASCH domain 10 106 1.9E-16 T 29-03-2018 IPR007374 ASCH domain CVS42_RS04890 b6bd9bf9df2c8d9ca18f1cd79e873c36 108 SUPERFAMILY SSF88697 6 106 9.2E-34 T 29-03-2018 IPR015947 PUA-like domain CVS42_RS04890 b6bd9bf9df2c8d9ca18f1cd79e873c36 108 Gene3D G3DSA:2.30.130.30 6 106 4.4E-22 T 29-03-2018 CVS42_RS09365 8da087c02f11c35b72ccf64ccd83a3bc 540 Gene3D G3DSA:3.40.50.980 192 344 7.8E-34 T 29-03-2018 CVS42_RS09365 8da087c02f11c35b72ccf64ccd83a3bc 540 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 529 4.7E-23 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CVS42_RS09365 8da087c02f11c35b72ccf64ccd83a3bc 540 SUPERFAMILY SSF56801 13 538 1.7E-134 T 29-03-2018 CVS42_RS09365 8da087c02f11c35b72ccf64ccd83a3bc 540 Gene3D G3DSA:3.40.50.980 22 191 2.1E-34 T 29-03-2018 CVS42_RS09365 8da087c02f11c35b72ccf64ccd83a3bc 540 Pfam PF00501 AMP-binding enzyme 31 446 1.9E-90 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CVS42_RS09365 8da087c02f11c35b72ccf64ccd83a3bc 540 Gene3D G3DSA:3.30.300.30 442 539 6.3E-29 T 29-03-2018 CVS42_RS09365 8da087c02f11c35b72ccf64ccd83a3bc 540 Gene3D G3DSA:2.30.38.10 366 440 4.9E-19 T 29-03-2018 CVS42_RS01660 e1d631c697de251856e01c9f70a5bd20 88 Gene3D G3DSA:1.10.260.40 2 81 1.5E-10 T 29-03-2018 CVS42_RS01660 e1d631c697de251856e01c9f70a5bd20 88 SUPERFAMILY SSF47413 7 65 3.22E-9 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS01660 e1d631c697de251856e01c9f70a5bd20 88 Pfam PF01381 Helix-turn-helix 15 65 4.3E-8 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS01660 e1d631c697de251856e01c9f70a5bd20 88 SMART SM00530 14 69 6.0E-6 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS06215 8a6b44a2baca13c752128292774c8184 249 Gene3D G3DSA:2.60.40.10 155 245 4.7E-14 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS06215 8a6b44a2baca13c752128292774c8184 249 Gene3D G3DSA:2.60.40.10 37 153 2.5E-33 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS06215 8a6b44a2baca13c752128292774c8184 249 SUPERFAMILY SSF49584 146 234 1.16E-18 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CVS42_RS06215 8a6b44a2baca13c752128292774c8184 249 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 38 152 6.7E-37 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CVS42_RS06215 8a6b44a2baca13c752128292774c8184 249 PRINTS PR00969 Pili chaperone signature 169 184 1.5E-31 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CVS42_RS06215 8a6b44a2baca13c752128292774c8184 249 PRINTS PR00969 Pili chaperone signature 111 128 1.5E-31 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CVS42_RS06215 8a6b44a2baca13c752128292774c8184 249 PRINTS PR00969 Pili chaperone signature 83 104 1.5E-31 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CVS42_RS06215 8a6b44a2baca13c752128292774c8184 249 PRINTS PR00969 Pili chaperone signature 38 47 1.5E-31 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CVS42_RS06215 8a6b44a2baca13c752128292774c8184 249 PRINTS PR00969 Pili chaperone signature 134 149 1.5E-31 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CVS42_RS06215 8a6b44a2baca13c752128292774c8184 249 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 175 230 7.6E-7 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CVS42_RS06215 8a6b44a2baca13c752128292774c8184 249 SUPERFAMILY SSF49354 32 152 8.5E-38 T 29-03-2018 IPR008962 PapD-like CVS42_RS17120 c43fffc4ae00d12468cb0220ca889a10 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 406 4.7E-167 T 29-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CVS42_RS17120 c43fffc4ae00d12468cb0220ca889a10 417 Pfam PF00171 Aldehyde dehydrogenase family 4 283 4.0E-16 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS17120 c43fffc4ae00d12468cb0220ca889a10 417 SUPERFAMILY SSF53720 4 409 1.83E-109 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CVS42_RS17120 c43fffc4ae00d12468cb0220ca889a10 417 PIRSF PIRSF000151 1 417 5.5E-165 T 29-03-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CVS42_RS17120 c43fffc4ae00d12468cb0220ca889a10 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 29-03-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CVS42_RS17120 c43fffc4ae00d12468cb0220ca889a10 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 416 40.093 T 29-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CVS42_RS17120 c43fffc4ae00d12468cb0220ca889a10 417 Gene3D G3DSA:3.40.605.10 239 417 1.8E-29 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS17120 c43fffc4ae00d12468cb0220ca889a10 417 Gene3D G3DSA:3.40.605.10 2 238 3.5E-41 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS21625 010c91e6f84d4417987ef8d4f3fb3f11 198 Gene3D G3DSA:1.10.357.10 57 197 2.8E-15 T 29-03-2018 CVS42_RS21625 010c91e6f84d4417987ef8d4f3fb3f11 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 58 4.4E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS21625 010c91e6f84d4417987ef8d4f3fb3f11 198 SUPERFAMILY SSF46689 6 72 2.36E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS21625 010c91e6f84d4417987ef8d4f3fb3f11 198 Gene3D G3DSA:1.10.10.60 2 56 2.6E-14 T 29-03-2018 CVS42_RS21625 010c91e6f84d4417987ef8d4f3fb3f11 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 40.906 T 29-03-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 CVS42_RS13120 b8324f098081da1cd1a522bf087b1a74 141 TIGRFAM TIGR00208 fliS: flagellar protein FliS 3 122 1.0E-20 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CVS42_RS13120 b8324f098081da1cd1a522bf087b1a74 141 Gene3D G3DSA:1.20.120.340 1 126 3.6E-35 T 29-03-2018 CVS42_RS13120 b8324f098081da1cd1a522bf087b1a74 141 PIRSF PIRSF039090 1 133 3.4E-46 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CVS42_RS13120 b8324f098081da1cd1a522bf087b1a74 141 SUPERFAMILY SSF101116 8 126 8.11E-33 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CVS42_RS13120 b8324f098081da1cd1a522bf087b1a74 141 Pfam PF02561 Flagellar protein FliS 8 122 2.6E-30 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CVS42_RS16240 8ba3dbde4972a98251966d4702b1a5cc 459 SUPERFAMILY SSF103473 19 449 3.14E-38 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS16240 8ba3dbde4972a98251966d4702b1a5cc 459 Pfam PF07690 Major Facilitator Superfamily 38 258 4.4E-11 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS16240 8ba3dbde4972a98251966d4702b1a5cc 459 Gene3D G3DSA:1.20.1250.20 257 456 3.5E-13 T 29-03-2018 CVS42_RS16240 8ba3dbde4972a98251966d4702b1a5cc 459 Gene3D G3DSA:1.20.1250.20 10 232 3.7E-20 T 29-03-2018 CVS42_RS10805 e3dcfe76e7da0f699a9d72ccde08668b 222 Gene3D G3DSA:3.40.50.300 21 221 1.2E-17 T 29-03-2018 CVS42_RS10805 e3dcfe76e7da0f699a9d72ccde08668b 222 SUPERFAMILY SSF52540 24 184 1.8E-15 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11260 bfb253aff042d9ea771ae45ba6aa66aa 259 Gene3D G3DSA:3.40.190.10 16 247 1.5E-13 T 29-03-2018 CVS42_RS11260 bfb253aff042d9ea771ae45ba6aa66aa 259 SUPERFAMILY SSF53850 20 230 4.46E-21 T 29-03-2018 CVS42_RS11260 bfb253aff042d9ea771ae45ba6aa66aa 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 118 230 4.8E-7 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS12795 8d0e613b46cac73262c149c3be16439a 118 PIRSF PIRSF021239 1 114 2.1E-57 T 29-03-2018 IPR007437 Putative member of DMT superfamily CVS42_RS12795 8d0e613b46cac73262c149c3be16439a 118 Pfam PF04342 Putative member of DMT superfamily (DUF486) 8 111 1.3E-47 T 29-03-2018 IPR007437 Putative member of DMT superfamily CVS42_RS15490 7c13fafd2da86ce6697fd7846fb29e46 157 Pfam PF08534 Redoxin 5 154 3.4E-33 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CVS42_RS15490 7c13fafd2da86ce6697fd7846fb29e46 157 SUPERFAMILY SSF52833 1 154 1.89E-32 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS15490 7c13fafd2da86ce6697fd7846fb29e46 157 Gene3D G3DSA:3.40.30.10 1 157 5.2E-27 T 29-03-2018 CVS42_RS15735 ccdf47a18d6dd25d4827661f0a94b634 198 Gene3D G3DSA:1.10.10.60 1 58 1.0E-11 T 29-03-2018 CVS42_RS15735 ccdf47a18d6dd25d4827661f0a94b634 198 SUPERFAMILY SSF46689 3 70 1.15E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS15735 ccdf47a18d6dd25d4827661f0a94b634 198 SUPERFAMILY SSF48498 81 172 8.9E-12 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CVS42_RS15735 ccdf47a18d6dd25d4827661f0a94b634 198 Gene3D G3DSA:1.10.357.10 59 197 9.9E-11 T 29-03-2018 CVS42_RS15735 ccdf47a18d6dd25d4827661f0a94b634 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 1.2E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS02045 3176dcca2c184282125798fc4b36f631 475 Gene3D G3DSA:3.30.300.30 367 470 5.1E-19 T 29-03-2018 CVS42_RS02045 3176dcca2c184282125798fc4b36f631 475 Pfam PF00501 AMP-binding enzyme 17 373 2.1E-47 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CVS42_RS02045 3176dcca2c184282125798fc4b36f631 475 Pfam PF13193 AMP-binding enzyme C-terminal domain 383 442 8.2E-11 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CVS42_RS02045 3176dcca2c184282125798fc4b36f631 475 Gene3D G3DSA:3.40.50.980 11 153 6.7E-21 T 29-03-2018 CVS42_RS02045 3176dcca2c184282125798fc4b36f631 475 SUPERFAMILY SSF56801 15 449 1.15E-92 T 29-03-2018 CVS42_RS02045 3176dcca2c184282125798fc4b36f631 475 ProSitePatterns PS00455 Putative AMP-binding domain signature. 148 159 - T 29-03-2018 IPR020845 AMP-binding, conserved site CVS42_RS02045 3176dcca2c184282125798fc4b36f631 475 Gene3D G3DSA:3.40.50.980 154 296 5.3E-26 T 29-03-2018 CVS42_RS02045 3176dcca2c184282125798fc4b36f631 475 Gene3D G3DSA:2.30.38.10 297 366 9.7E-10 T 29-03-2018 CVS42_RS02045 3176dcca2c184282125798fc4b36f631 475 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 35 449 1.1E-101 T 29-03-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 CVS42_RS04450 4862cac4abf01d0577e61154541964f6 164 Pfam PF07295 Zinc-ribbon containing domain 18 161 4.2E-45 T 29-03-2018 IPR009912 Zinc-ribbon containing domain CVS42_RS10125 b0e0e335975883d21975e47042fd0321 173 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 7.1E-17 T 29-03-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CVS42_RS03995 228022073641ffb040de26a052437778 71 Gene3D G3DSA:1.20.5.300 3 49 1.1E-15 T 29-03-2018 CVS42_RS03995 228022073641ffb040de26a052437778 71 Pfam PF04102 SlyX 5 71 1.6E-24 T 29-03-2018 IPR007236 SlyX CVS42_RS03995 228022073641ffb040de26a052437778 71 Hamap MF_00715 Protein SlyX [slyX]. 4 71 16.545 T 29-03-2018 IPR007236 SlyX CVS42_RS12740 8274dcb4046155b2f7a7fe9eb80b0c86 270 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 268 34.545 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS12740 8274dcb4046155b2f7a7fe9eb80b0c86 270 PIRSF PIRSF000161 3 270 1.0E-86 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS12740 8274dcb4046155b2f7a7fe9eb80b0c86 270 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 128 6.2E-40 T 29-03-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS12740 8274dcb4046155b2f7a7fe9eb80b0c86 270 Gene3D G3DSA:3.40.50.720 2 143 3.5E-28 T 29-03-2018 CVS42_RS12740 8274dcb4046155b2f7a7fe9eb80b0c86 270 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 131 267 6.2E-42 T 29-03-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS12740 8274dcb4046155b2f7a7fe9eb80b0c86 270 Gene3D G3DSA:3.30.360.10 144 237 1.4E-35 T 29-03-2018 CVS42_RS12740 8274dcb4046155b2f7a7fe9eb80b0c86 270 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 267 1.0E-101 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS12740 8274dcb4046155b2f7a7fe9eb80b0c86 270 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 153 170 - T 29-03-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CVS42_RS12740 8274dcb4046155b2f7a7fe9eb80b0c86 270 SUPERFAMILY SSF51735 3 129 2.19E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS12740 8274dcb4046155b2f7a7fe9eb80b0c86 270 SUPERFAMILY SSF51735 239 269 2.19E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS12740 8274dcb4046155b2f7a7fe9eb80b0c86 270 SUPERFAMILY SSF55347 130 239 1.07E-37 T 29-03-2018 CVS42_RS02090 90c750f2d415e096ff8e55caca077207 96 Pfam PF03692 Putative zinc- or iron-chelating domain 11 80 9.3E-11 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CVS42_RS06835 5063e86db3deeaa42e979890982b59ab 399 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 298 5.2E-9 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CVS42_RS06835 5063e86db3deeaa42e979890982b59ab 399 Gene3D G3DSA:2.40.50.100 172 379 0.16 T 29-03-2018 CVS42_RS06835 5063e86db3deeaa42e979890982b59ab 399 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 379 1.3E-80 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CVS42_RS06835 5063e86db3deeaa42e979890982b59ab 399 SUPERFAMILY SSF111369 55 305 1.31E-70 T 29-03-2018 CVS42_RS06835 5063e86db3deeaa42e979890982b59ab 399 Gene3D G3DSA:1.10.287.470 125 171 1.6E-11 T 29-03-2018 CVS42_RS06835 5063e86db3deeaa42e979890982b59ab 399 Gene3D G3DSA:2.40.50.100 67 124 5.6E-17 T 29-03-2018 CVS42_RS19010 be1a95a1b14fa056e2d64c8706d282f7 108 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 108 14.336 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CVS42_RS19010 be1a95a1b14fa056e2d64c8706d282f7 108 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 72 88 1.3E-8 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CVS42_RS19010 be1a95a1b14fa056e2d64c8706d282f7 108 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 93 106 1.3E-8 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CVS42_RS19010 be1a95a1b14fa056e2d64c8706d282f7 108 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 38 54 1.3E-8 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CVS42_RS19010 be1a95a1b14fa056e2d64c8706d282f7 108 Pfam PF02049 Flagellar hook-basal body complex protein FliE 25 107 3.8E-22 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CVS42_RS19010 be1a95a1b14fa056e2d64c8706d282f7 108 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 15 106 1.7E-14 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CVS42_RS01305 339ebcbc0afdeac62a4a0f569ab8784e 159 SUPERFAMILY SSF55729 12 146 9.43E-19 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS01305 339ebcbc0afdeac62a4a0f569ab8784e 159 Gene3D G3DSA:3.40.630.30 4 147 7.0E-17 T 29-03-2018 CVS42_RS01305 339ebcbc0afdeac62a4a0f569ab8784e 159 Pfam PF00583 Acetyltransferase (GNAT) family 52 138 1.7E-8 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS19370 b10779f47d32bccd48fc081009d5f389 336 SUPERFAMILY SSF56655 2 325 1.95E-110 T 29-03-2018 CVS42_RS19370 b10779f47d32bccd48fc081009d5f389 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 2.3E-171 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CVS42_RS19370 b10779f47d32bccd48fc081009d5f389 336 PIRSF PIRSF004532 1 332 7.4E-139 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CVS42_RS19370 b10779f47d32bccd48fc081009d5f389 336 Gene3D G3DSA:3.30.540.10 152 336 5.1E-53 T 29-03-2018 CVS42_RS19370 b10779f47d32bccd48fc081009d5f389 336 Gene3D G3DSA:3.30.540.10 1 148 6.0E-60 T 29-03-2018 CVS42_RS19370 b10779f47d32bccd48fc081009d5f389 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 8.5E-133 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CVS42_RS08200 76f0cf76e878b04cb5f01639689c6264 293 SUPERFAMILY SSF46689 234 286 3.23E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS08200 76f0cf76e878b04cb5f01639689c6264 293 Gene3D G3DSA:2.60.120.280 32 170 1.6E-9 T 29-03-2018 CVS42_RS08200 76f0cf76e878b04cb5f01639689c6264 293 Pfam PF02311 AraC-like ligand binding domain 41 161 1.4E-6 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CVS42_RS08200 76f0cf76e878b04cb5f01639689c6264 293 Gene3D G3DSA:1.10.10.60 241 288 1.4E-14 T 29-03-2018 CVS42_RS08200 76f0cf76e878b04cb5f01639689c6264 293 Pfam PF12833 Helix-turn-helix domain 204 283 3.6E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS08200 76f0cf76e878b04cb5f01639689c6264 293 Gene3D G3DSA:1.10.10.60 171 240 5.5E-6 T 29-03-2018 CVS42_RS08200 76f0cf76e878b04cb5f01639689c6264 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 235 277 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CVS42_RS08200 76f0cf76e878b04cb5f01639689c6264 293 SMART SM00342 198 281 1.1E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CVS42_RS08200 76f0cf76e878b04cb5f01639689c6264 293 SUPERFAMILY SSF51215 34 162 1.57E-9 T 29-03-2018 CVS42_RS08200 76f0cf76e878b04cb5f01639689c6264 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 265 1.7E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS08200 76f0cf76e878b04cb5f01639689c6264 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 281 1.7E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CVS42_RS05750 62a5b8f67b7d13cfbe92ec68394257d3 140 SUPERFAMILY SSF69635 3 108 1.33E-5 T 29-03-2018 CVS42_RS05750 62a5b8f67b7d13cfbe92ec68394257d3 140 Gene3D G3DSA:3.30.1460.10 2 111 8.9E-10 T 29-03-2018 CVS42_RS21970 0e541c4ba1af847a6342f5c8e58fa339 154 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 139 18.607 T 29-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CVS42_RS21970 0e541c4ba1af847a6342f5c8e58fa339 154 Pfam PF02416 mttA/Hcf106 family 4 52 4.6E-7 T 29-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CVS42_RS21970 0e541c4ba1af847a6342f5c8e58fa339 154 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.3E-28 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CVS42_RS21970 0e541c4ba1af847a6342f5c8e58fa339 154 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.3E-28 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CVS42_RS21970 0e541c4ba1af847a6342f5c8e58fa339 154 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.3E-28 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CVS42_RS21970 0e541c4ba1af847a6342f5c8e58fa339 154 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 7.8E-32 T 29-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CVS42_RS11455 a53e1b3c2a55515274263d340c1b9694 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 458 8.6E-90 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CVS42_RS11455 a53e1b3c2a55515274263d340c1b9694 538 Gene3D G3DSA:3.40.190.10 173 306 4.6E-39 T 29-03-2018 CVS42_RS11455 a53e1b3c2a55515274263d340c1b9694 538 Gene3D G3DSA:3.10.105.10 307 507 7.9E-63 T 29-03-2018 CVS42_RS11455 a53e1b3c2a55515274263d340c1b9694 538 Gene3D G3DSA:3.90.76.10 59 172 1.0E-34 T 29-03-2018 CVS42_RS11455 a53e1b3c2a55515274263d340c1b9694 538 PIRSF PIRSF002741 2 538 4.1E-107 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CVS42_RS11455 a53e1b3c2a55515274263d340c1b9694 538 SUPERFAMILY SSF53850 33 526 1.09E-141 T 29-03-2018 CVS42_RS20200 cffc395ca5d45376f914724f04fcb143 479 SUPERFAMILY SSF111283 18 478 4.97E-134 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CVS42_RS20200 cffc395ca5d45376f914724f04fcb143 479 PIRSF PIRSF004919 12 479 5.2E-143 T 29-03-2018 IPR025502 TldD CVS42_RS20200 cffc395ca5d45376f914724f04fcb143 479 Pfam PF01523 Putative modulator of DNA gyrase 35 330 2.2E-69 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CVS42_RS20200 cffc395ca5d45376f914724f04fcb143 479 Gene3D G3DSA:3.30.2290.10 16 238 2.9E-58 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CVS42_RS21695 ebdf4f889e585e765e4868a7701223b9 197 SUPERFAMILY SSF52218 26 189 6.29E-30 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS21695 ebdf4f889e585e765e4868a7701223b9 197 Pfam PF12724 Flavodoxin domain 28 174 3.5E-45 T 29-03-2018 IPR026816 Flavodoxin domain CVS42_RS21695 ebdf4f889e585e765e4868a7701223b9 197 Gene3D G3DSA:3.40.50.360 26 196 1.1E-15 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS15630 a3f6da4064fe9c560b3ddff3540a039e 130 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 61 127 1.7E-7 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CVS42_RS15630 a3f6da4064fe9c560b3ddff3540a039e 130 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 64 126 9.6E-11 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CVS42_RS15630 a3f6da4064fe9c560b3ddff3540a039e 130 Gene3D G3DSA:3.30.2420.10 58 130 8.5E-10 T 29-03-2018 CVS42_RS15630 a3f6da4064fe9c560b3ddff3540a039e 130 SUPERFAMILY SSF74653 63 123 3.79E-10 T 29-03-2018 CVS42_RS16955 8ae6c41d2e993293e7566dff82042e90 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 342 5.1E-26 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS16955 8ae6c41d2e993293e7566dff82042e90 347 Gene3D G3DSA:1.10.3720.10 9 331 2.5E-35 T 29-03-2018 CVS42_RS16955 8ae6c41d2e993293e7566dff82042e90 347 SUPERFAMILY SSF161098 139 325 3.14E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS05760 338158b16539bb36c6a605fe8621bdb6 352 SUPERFAMILY SSF160544 238 345 2.49E-33 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CVS42_RS05760 338158b16539bb36c6a605fe8621bdb6 352 Gene3D G3DSA:3.40.1690.10 212 347 5.8E-49 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CVS42_RS05760 338158b16539bb36c6a605fe8621bdb6 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 3.2E-46 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS05760 338158b16539bb36c6a605fe8621bdb6 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 3.2E-46 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS05760 338158b16539bb36c6a605fe8621bdb6 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 3.2E-46 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS05760 338158b16539bb36c6a605fe8621bdb6 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 3.2E-46 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS05760 338158b16539bb36c6a605fe8621bdb6 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 3.2E-46 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS05760 338158b16539bb36c6a605fe8621bdb6 352 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 340 1.3E-115 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CVS42_RS05760 338158b16539bb36c6a605fe8621bdb6 352 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 4.4E-143 T 29-03-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 CVS42_RS02355 bdc40ecb72370a2b7674a4f80047bed7 314 Gene3D G3DSA:3.40.50.720 3 112 3.0E-13 T 29-03-2018 CVS42_RS02355 bdc40ecb72370a2b7674a4f80047bed7 314 Gene3D G3DSA:3.40.50.720 113 282 9.6E-50 T 29-03-2018 CVS42_RS02355 bdc40ecb72370a2b7674a4f80047bed7 314 SUPERFAMILY SSF51735 101 279 3.05E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS02355 bdc40ecb72370a2b7674a4f80047bed7 314 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 278 2.5E-54 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CVS42_RS16985 ccff3a6e55ca23acb569a3c7d01ff5b1 337 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 237 4.2E-56 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CVS42_RS16985 ccff3a6e55ca23acb569a3c7d01ff5b1 337 Gene3D G3DSA:3.90.25.10 190 337 2.3E-36 T 29-03-2018 CVS42_RS16985 ccff3a6e55ca23acb569a3c7d01ff5b1 337 SUPERFAMILY SSF51735 1 333 2.06E-90 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS16985 ccff3a6e55ca23acb569a3c7d01ff5b1 337 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 1.5E-24 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CVS42_RS16985 ccff3a6e55ca23acb569a3c7d01ff5b1 337 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.5E-24 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CVS42_RS16985 ccff3a6e55ca23acb569a3c7d01ff5b1 337 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 1.5E-24 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CVS42_RS16985 ccff3a6e55ca23acb569a3c7d01ff5b1 337 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 1.5E-24 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CVS42_RS16985 ccff3a6e55ca23acb569a3c7d01ff5b1 337 Gene3D G3DSA:3.40.50.720 2 189 3.1E-34 T 29-03-2018 CVS42_RS08870 0add56d4fc065a086befe6c633d37eb1 332 PIRSF PIRSF026649 11 315 3.0E-109 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CVS42_RS08870 0add56d4fc065a086befe6c633d37eb1 332 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 305 4.6E-68 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CVS42_RS08870 0add56d4fc065a086befe6c633d37eb1 332 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 6 311 46.266 T 29-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 CVS42_RS09710 dd7988fcd9331e76d1ff85ba9f2ab2b9 134 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 19 114 5.0E-34 T 29-03-2018 IPR020358 Uncharacterised protein family Y4oB CVS42_RS09710 dd7988fcd9331e76d1ff85ba9f2ab2b9 134 Pfam PF09722 Protein of unknown function (DUF2384) 79 132 1.2E-6 T 29-03-2018 IPR024467 Domain of unknown function DUF2384 CVS42_RS11540 1e79a4af9733a428a015499c4859c75b 202 SMART SM00702 13 189 1.1E-30 T 29-03-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 CVS42_RS11540 1e79a4af9733a428a015499c4859c75b 202 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 99 189 1.5E-20 T 29-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CVS42_RS11540 1e79a4af9733a428a015499c4859c75b 202 Gene3D G3DSA:2.60.120.620 9 197 9.8E-37 T 29-03-2018 CVS42_RS16685 80fe5b682ad3e18b4cc2762dcbd154fb 297 Pfam PF00691 OmpA family 176 274 1.8E-15 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS16685 80fe5b682ad3e18b4cc2762dcbd154fb 297 SUPERFAMILY SSF103088 163 280 5.49E-31 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS16685 80fe5b682ad3e18b4cc2762dcbd154fb 297 Gene3D G3DSA:3.30.1330.60 118 293 4.9E-39 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS16685 80fe5b682ad3e18b4cc2762dcbd154fb 297 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 9 54 1.1E-16 T 29-03-2018 IPR025713 Motility protein B, N-terminal domain CVS42_RS12855 31d4e19f1be7ae0691a71e48cec53222 246 Gene3D G3DSA:1.10.10.200 1 78 2.3E-30 T 29-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like CVS42_RS12855 31d4e19f1be7ae0691a71e48cec53222 246 Pfam PF01709 Transcriptional regulator 5 235 7.2E-97 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CVS42_RS12855 31d4e19f1be7ae0691a71e48cec53222 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 6.4E-102 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CVS42_RS12855 31d4e19f1be7ae0691a71e48cec53222 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 36.477 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CVS42_RS12855 31d4e19f1be7ae0691a71e48cec53222 246 SUPERFAMILY SSF75625 3 244 6.8E-97 T 29-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CVS42_RS12855 31d4e19f1be7ae0691a71e48cec53222 246 Gene3D G3DSA:3.30.70.980 178 237 9.6E-9 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CVS42_RS12855 31d4e19f1be7ae0691a71e48cec53222 246 Gene3D G3DSA:3.30.70.980 83 177 2.4E-33 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CVS42_RS22075 26bf6b7eea31abcea94c1373930d2685 257 SUPERFAMILY SSF46785 7 67 6.72E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS22075 26bf6b7eea31abcea94c1373930d2685 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CVS42_RS22075 26bf6b7eea31abcea94c1373930d2685 257 SMART SM01134 73 234 1.3E-61 T 29-03-2018 CVS42_RS22075 26bf6b7eea31abcea94c1373930d2685 257 Gene3D G3DSA:1.10.10.10 1 72 3.6E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS22075 26bf6b7eea31abcea94c1373930d2685 257 Pfam PF00455 DeoR C terminal sensor domain 77 233 1.1E-43 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CVS42_RS22075 26bf6b7eea31abcea94c1373930d2685 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 1.7E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CVS42_RS22075 26bf6b7eea31abcea94c1373930d2685 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 1.7E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CVS42_RS22075 26bf6b7eea31abcea94c1373930d2685 257 SMART SM00420 9 61 9.4E-15 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CVS42_RS22075 26bf6b7eea31abcea94c1373930d2685 257 Pfam PF08220 DeoR-like helix-turn-helix domain 9 60 2.8E-15 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CVS42_RS22075 26bf6b7eea31abcea94c1373930d2685 257 SUPERFAMILY SSF100950 76 233 1.47E-31 T 29-03-2018 CVS42_RS22075 26bf6b7eea31abcea94c1373930d2685 257 Gene3D G3DSA:3.40.50.1360 73 244 5.4E-34 T 29-03-2018 CVS42_RS21750 52679a1b6be0ff0e9e5d5f12d712c45c 81 Gene3D G3DSA:3.30.110.40 5 81 1.7E-27 T 29-03-2018 IPR001455 TusA-like domain CVS42_RS21750 52679a1b6be0ff0e9e5d5f12d712c45c 81 Pfam PF01206 Sulfurtransferase TusA 10 79 3.2E-24 T 29-03-2018 IPR001455 TusA-like domain CVS42_RS21750 52679a1b6be0ff0e9e5d5f12d712c45c 81 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 28.313 T 29-03-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 CVS42_RS21750 52679a1b6be0ff0e9e5d5f12d712c45c 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 29-03-2018 IPR001455 TusA-like domain CVS42_RS21750 52679a1b6be0ff0e9e5d5f12d712c45c 81 SUPERFAMILY SSF64307 8 80 1.03E-25 T 29-03-2018 IPR001455 TusA-like domain CVS42_RS16320 a0d7f9311d531f5eac7894e19033380c 158 Pfam PF11086 Protein of unknown function (DUF2878) 4 146 2.1E-32 T 29-03-2018 IPR021306 Protein of unknown function DUF2878 CVS42_RS01990 9ce351a3a8aa1a49807a29c32e9b4035 703 Pfam PF05960 Bacterial protein of unknown function (DUF885) 63 694 2.8E-99 T 29-03-2018 IPR010281 Protein of unknown function DUF885 CVS42_RS13305 28e08b6071524136cf1660a859234b05 600 SUPERFAMILY SSF82866 395 591 6.15E-38 T 29-03-2018 CVS42_RS13305 28e08b6071524136cf1660a859234b05 600 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 124 586 2.0E-113 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CVS42_RS13305 28e08b6071524136cf1660a859234b05 600 Pfam PF13721 SecD export protein N-terminal TM region 9 95 1.6E-11 T 29-03-2018 IPR027398 SecD export protein N-terminal TM domain CVS42_RS13305 28e08b6071524136cf1660a859234b05 600 Gene3D G3DSA:1.20.1640.10 347 587 1.9E-24 T 29-03-2018 CVS42_RS13305 28e08b6071524136cf1660a859234b05 600 Pfam PF07549 SecD/SecF GG Motif 120 140 2.4E-4 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CVS42_RS13305 28e08b6071524136cf1660a859234b05 600 Pfam PF02355 Protein export membrane protein 419 585 1.9E-20 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CVS42_RS13305 28e08b6071524136cf1660a859234b05 600 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 10 599 43.718 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CVS42_RS13305 28e08b6071524136cf1660a859234b05 600 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 336 579 3.0E-68 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CVS42_RS13910 d3440f0adf27834bacc14e417f18265c 160 SUPERFAMILY SSF54637 10 155 1.67E-22 T 29-03-2018 IPR029069 HotDog domain CVS42_RS13910 d3440f0adf27834bacc14e417f18265c 160 Pfam PF14539 Domain of unknown function (DUF4442) 17 151 1.8E-27 T 29-03-2018 IPR027961 Protein of unknown function DUF4442 CVS42_RS13910 d3440f0adf27834bacc14e417f18265c 160 Gene3D G3DSA:3.10.129.10 8 160 6.0E-22 T 29-03-2018 CVS42_RS21710 895400d0feec869292933d08f9578182 440 Gene3D G3DSA:3.90.230.10 158 439 1.4E-52 T 29-03-2018 CVS42_RS21710 895400d0feec869292933d08f9578182 440 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 333 345 - T 29-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CVS42_RS21710 895400d0feec869292933d08f9578182 440 SUPERFAMILY SSF55920 161 436 8.77E-53 T 29-03-2018 IPR000994 Peptidase M24 CVS42_RS21710 895400d0feec869292933d08f9578182 440 Pfam PF00557 Metallopeptidase family M24 166 427 3.3E-43 T 29-03-2018 IPR000994 Peptidase M24 CVS42_RS21710 895400d0feec869292933d08f9578182 440 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 440 58.662 T 29-03-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 CVS42_RS04660 85e62d1f7c73597d503ccd2d72f744c8 155 Pfam PF07670 Nucleoside recognition 31 122 3.9E-7 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CVS42_RS00785 f211cf1e40e978794500234574ce81f6 443 SUPERFAMILY SSF54368 2 104 5.1E-22 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CVS42_RS00785 f211cf1e40e978794500234574ce81f6 443 Gene3D G3DSA:3.30.590.10 106 442 7.7E-100 T 29-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CVS42_RS00785 f211cf1e40e978794500234574ce81f6 443 Pfam PF00120 Glutamine synthetase, catalytic domain 109 437 5.2E-113 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CVS42_RS00785 f211cf1e40e978794500234574ce81f6 443 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 243 258 - T 29-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CVS42_RS00785 f211cf1e40e978794500234574ce81f6 443 Gene3D G3DSA:3.10.20.70 1 105 2.5E-21 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CVS42_RS00785 f211cf1e40e978794500234574ce81f6 443 SMART SM01230 107 362 8.9E-115 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CVS42_RS00785 f211cf1e40e978794500234574ce81f6 443 SUPERFAMILY SSF55931 108 440 2.65E-113 T 29-03-2018 CVS42_RS01980 5b026e69d4bef7b9b9747bc6c3cb1fec 391 SUPERFAMILY SSF56796 10 389 5.63E-105 T 29-03-2018 CVS42_RS01980 5b026e69d4bef7b9b9747bc6c3cb1fec 391 Gene3D G3DSA:3.40.50.1970 17 187 2.8E-41 T 29-03-2018 CVS42_RS01980 5b026e69d4bef7b9b9747bc6c3cb1fec 391 Pfam PF00465 Iron-containing alcohol dehydrogenase 17 371 2.5E-91 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CVS42_RS01980 5b026e69d4bef7b9b9747bc6c3cb1fec 391 Gene3D G3DSA:1.20.1090.10 188 391 7.7E-43 T 29-03-2018 CVS42_RS03895 ea163144b07cf0b3f31fbc7c1efbd283 302 SUPERFAMILY SSF110581 4 301 3.27E-118 T 29-03-2018 CVS42_RS03895 ea163144b07cf0b3f31fbc7c1efbd283 302 Gene3D G3DSA:3.40.1790.10 1 302 2.4E-144 T 29-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 CVS42_RS03895 ea163144b07cf0b3f31fbc7c1efbd283 302 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 10 302 44.028 T 29-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 CVS42_RS03895 ea163144b07cf0b3f31fbc7c1efbd283 302 Pfam PF04227 Indigoidine synthase A like protein 11 300 1.0E-136 T 29-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 CVS42_RS20270 c7839acb16a19c207281afbcbd02901c 162 SUPERFAMILY SSF54523 7 126 1.18E-9 T 29-03-2018 CVS42_RS20270 c7839acb16a19c207281afbcbd02901c 162 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 7.0E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS20270 c7839acb16a19c207281afbcbd02901c 162 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 26 4.3E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS20270 c7839acb16a19c207281afbcbd02901c 162 Gene3D G3DSA:3.30.700.10 7 158 7.3E-9 T 29-03-2018 CVS42_RS20270 c7839acb16a19c207281afbcbd02901c 162 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS03635 d3298dcf3ca4438fe890022baffa00bc 176 SUPERFAMILY SSF55729 6 139 1.99E-17 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS03635 d3298dcf3ca4438fe890022baffa00bc 176 Gene3D G3DSA:3.40.630.30 1 150 6.8E-19 T 29-03-2018 CVS42_RS03635 d3298dcf3ca4438fe890022baffa00bc 176 Pfam PF00583 Acetyltransferase (GNAT) family 16 126 3.2E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS10580 21a3a907bf92e076cf379d090b3670e3 317 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 47 62 - T 29-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10580 21a3a907bf92e076cf379d090b3670e3 317 Pfam PF00146 NADH dehydrogenase 17 311 1.1E-47 T 29-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS09385 7c9aad21119dbae22e322ac7adb86650 257 SUPERFAMILY SSF51366 1 256 8.63E-72 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CVS42_RS09385 7c9aad21119dbae22e322ac7adb86650 257 Pfam PF00977 Histidine biosynthesis protein 5 239 1.1E-75 T 29-03-2018 IPR006062 Histidine biosynthesis GO:0000105 CVS42_RS09385 7c9aad21119dbae22e322ac7adb86650 257 Gene3D G3DSA:3.20.20.70 4 252 2.9E-59 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS09385 7c9aad21119dbae22e322ac7adb86650 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 43.888 T 29-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CVS42_RS09385 7c9aad21119dbae22e322ac7adb86650 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 3.9E-109 T 29-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CVS42_RS14345 1aebdf167351cbb846f5f80cc1e37afa 296 Pfam PF01368 DHH family 2 142 1.7E-16 T 29-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CVS42_RS14345 1aebdf167351cbb846f5f80cc1e37afa 296 Gene3D G3DSA:3.90.1640.10 1 184 4.7E-50 T 29-03-2018 CVS42_RS14345 1aebdf167351cbb846f5f80cc1e37afa 296 SUPERFAMILY SSF64182 1 293 1.44E-55 T 29-03-2018 CVS42_RS14345 1aebdf167351cbb846f5f80cc1e37afa 296 SMART SM01131 177 293 1.1E-22 T 29-03-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CVS42_RS14345 1aebdf167351cbb846f5f80cc1e37afa 296 Pfam PF02833 DHHA2 domain 179 290 4.1E-14 T 29-03-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CVS42_RS02290 cf7b23b72833f1984e6d9f44b92720fc 114 Pfam PF01541 GIY-YIG catalytic domain 19 88 2.2E-12 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CVS42_RS02290 cf7b23b72833f1984e6d9f44b92720fc 114 Gene3D G3DSA:3.40.1440.10 12 107 1.7E-6 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CVS42_RS02290 cf7b23b72833f1984e6d9f44b92720fc 114 SMART SM00465 18 97 8.5E-4 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CVS42_RS02290 cf7b23b72833f1984e6d9f44b92720fc 114 SUPERFAMILY SSF82771 18 89 6.93E-11 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CVS42_RS02290 cf7b23b72833f1984e6d9f44b92720fc 114 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 16 110 29.207 T 29-03-2018 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease CVS42_RS17285 d5077c966f9ffc428a0a2b727bbb09c2 157 SUPERFAMILY SSF52540 28 151 3.1E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS17285 d5077c966f9ffc428a0a2b727bbb09c2 157 Gene3D G3DSA:3.40.50.300 2 154 2.9E-51 T 29-03-2018 CVS42_RS17285 d5077c966f9ffc428a0a2b727bbb09c2 157 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 134 2.3E-40 T 29-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CVS42_RS17285 d5077c966f9ffc428a0a2b727bbb09c2 157 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 9 140 3.1E-49 T 29-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CVS42_RS01635 f1f40567abfa0f790eb1391862b4c04a 84 Pfam PF04606 Ogr/Delta-like zinc finger 5 48 6.6E-12 T 29-03-2018 IPR007684 Zinc finger, Ogr/Delta-type CVS42_RS05455 96ab34f8ffba7861cbad97640d58e3b8 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 69 85 1.5E-10 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CVS42_RS05455 96ab34f8ffba7861cbad97640d58e3b8 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 34 50 1.5E-10 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CVS42_RS05455 96ab34f8ffba7861cbad97640d58e3b8 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 90 103 1.5E-10 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CVS42_RS05455 96ab34f8ffba7861cbad97640d58e3b8 105 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 105 15.629 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CVS42_RS05455 96ab34f8ffba7861cbad97640d58e3b8 105 Pfam PF02049 Flagellar hook-basal body complex protein FliE 23 105 1.2E-28 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CVS42_RS05455 96ab34f8ffba7861cbad97640d58e3b8 105 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 30 104 1.9E-18 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CVS42_RS04360 085ad3273fe74732109e9843719b5ffd 97 Pfam PF07023 Protein of unknown function (DUF1315) 11 88 5.6E-26 T 29-03-2018 IPR009749 Protein of unknown function DUF1315 CVS42_RS00170 a8eb74198e21911bd5557e274433dbcf 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 8.4E-17 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS00170 a8eb74198e21911bd5557e274433dbcf 198 SUPERFAMILY SSF46689 4 65 1.5E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS00170 a8eb74198e21911bd5557e274433dbcf 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CVS42_RS00170 a8eb74198e21911bd5557e274433dbcf 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 1.2E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS00170 a8eb74198e21911bd5557e274433dbcf 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 1.2E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS00170 a8eb74198e21911bd5557e274433dbcf 198 Gene3D G3DSA:1.10.10.60 3 43 6.4E-18 T 29-03-2018 CVS42_RS00170 a8eb74198e21911bd5557e274433dbcf 198 Gene3D G3DSA:1.10.10.60 44 181 1.2E-9 T 29-03-2018 CVS42_RS19270 b26a3b6e80762ed571ac73451e72aeb0 447 SUPERFAMILY SSF111283 13 446 1.96E-124 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CVS42_RS19270 b26a3b6e80762ed571ac73451e72aeb0 447 Gene3D G3DSA:3.30.2290.10 1 233 8.2E-53 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CVS42_RS19270 b26a3b6e80762ed571ac73451e72aeb0 447 Pfam PF01523 Putative modulator of DNA gyrase 33 322 6.5E-55 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CVS42_RS10185 de105cbede5ad712d2b7fc7d5be946b9 128 SUPERFAMILY SSF161084 2 125 1.83E-24 T 29-03-2018 CVS42_RS10185 de105cbede5ad712d2b7fc7d5be946b9 128 Pfam PF01124 MAPEG family 6 121 1.4E-22 T 29-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CVS42_RS10185 de105cbede5ad712d2b7fc7d5be946b9 128 Gene3D G3DSA:1.20.120.550 1 127 6.8E-19 T 29-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain CVS42_RS16545 f55605d437a371331270e3f81a8e6290 404 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 36 56 6.2E-18 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS16545 f55605d437a371331270e3f81a8e6290 404 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 227 256 6.2E-18 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS16545 f55605d437a371331270e3f81a8e6290 404 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 198 225 6.2E-18 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS16545 f55605d437a371331270e3f81a8e6290 404 SMART SM00283 102 348 1.8E-4 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS16545 f55605d437a371331270e3f81a8e6290 404 SUPERFAMILY SSF58104 108 349 1.57E-34 T 29-03-2018 CVS42_RS16545 f55605d437a371331270e3f81a8e6290 404 Gene3D G3DSA:1.10.287.950 99 357 1.3E-31 T 29-03-2018 CVS42_RS16545 f55605d437a371331270e3f81a8e6290 404 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 177 320 2.0E-23 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS04815 a699770d1d82ca47e602210b2f961562 193 Gene3D G3DSA:3.40.50.880 1 193 3.3E-56 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS04815 a699770d1d82ca47e602210b2f961562 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 2.7E-12 T 29-03-2018 CVS42_RS04815 a699770d1d82ca47e602210b2f961562 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 2.7E-12 T 29-03-2018 CVS42_RS04815 a699770d1d82ca47e602210b2f961562 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 2.7E-12 T 29-03-2018 CVS42_RS04815 a699770d1d82ca47e602210b2f961562 193 Pfam PF00117 Glutamine amidotransferase class-I 3 191 2.0E-52 T 29-03-2018 IPR017926 Glutamine amidotransferase CVS42_RS04815 a699770d1d82ca47e602210b2f961562 193 SUPERFAMILY SSF52317 1 191 1.62E-52 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS04815 a699770d1d82ca47e602210b2f961562 193 PRINTS PR00097 Anthranilate synthase component II signature 99 107 5.6E-35 T 29-03-2018 CVS42_RS04815 a699770d1d82ca47e602210b2f961562 193 PRINTS PR00097 Anthranilate synthase component II signature 74 85 5.6E-35 T 29-03-2018 CVS42_RS04815 a699770d1d82ca47e602210b2f961562 193 PRINTS PR00097 Anthranilate synthase component II signature 169 182 5.6E-35 T 29-03-2018 CVS42_RS04815 a699770d1d82ca47e602210b2f961562 193 PRINTS PR00097 Anthranilate synthase component II signature 2 16 5.6E-35 T 29-03-2018 CVS42_RS04815 a699770d1d82ca47e602210b2f961562 193 PRINTS PR00097 Anthranilate synthase component II signature 119 131 5.6E-35 T 29-03-2018 CVS42_RS04815 a699770d1d82ca47e602210b2f961562 193 PRINTS PR00097 Anthranilate synthase component II signature 47 56 5.6E-35 T 29-03-2018 CVS42_RS04815 a699770d1d82ca47e602210b2f961562 193 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 2.1E-88 T 29-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CVS42_RS08725 e0f7e510c3bd8d7fec2e518ef31d2354 557 Pfam PF04324 BFD-like [2Fe-2S] binding domain 426 479 1.6E-9 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CVS42_RS08725 e0f7e510c3bd8d7fec2e518ef31d2354 557 SUPERFAMILY SSF51905 6 316 6.32E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS08725 e0f7e510c3bd8d7fec2e518ef31d2354 557 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 349 359 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CVS42_RS08725 e0f7e510c3bd8d7fec2e518ef31d2354 557 Pfam PF01266 FAD dependent oxidoreductase 8 356 8.3E-52 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CVS42_RS08725 e0f7e510c3bd8d7fec2e518ef31d2354 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 6 18 8.6E-19 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CVS42_RS08725 e0f7e510c3bd8d7fec2e518ef31d2354 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 308 314 8.6E-19 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CVS42_RS08725 e0f7e510c3bd8d7fec2e518ef31d2354 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 344 356 8.6E-19 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CVS42_RS08725 e0f7e510c3bd8d7fec2e518ef31d2354 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 47 8.6E-19 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CVS42_RS08725 e0f7e510c3bd8d7fec2e518ef31d2354 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 29 8.6E-19 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CVS42_RS08725 e0f7e510c3bd8d7fec2e518ef31d2354 557 Gene3D G3DSA:3.50.50.60 2 389 2.2E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS08725 e0f7e510c3bd8d7fec2e518ef31d2354 557 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 7 532 6.2E-259 T 29-03-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CVS42_RS12455 f7def9bad989a56b46d897f062633ea9 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.6E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS12455 f7def9bad989a56b46d897f062633ea9 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.6E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS12455 f7def9bad989a56b46d897f062633ea9 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.6E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS12455 f7def9bad989a56b46d897f062633ea9 290 SUPERFAMILY SSF46785 1 81 1.82E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS12455 f7def9bad989a56b46d897f062633ea9 290 Gene3D G3DSA:1.10.10.10 1 83 9.4E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS12455 f7def9bad989a56b46d897f062633ea9 290 Gene3D G3DSA:3.40.190.10 85 275 4.5E-11 T 29-03-2018 CVS42_RS12455 f7def9bad989a56b46d897f062633ea9 290 SUPERFAMILY SSF53850 88 274 4.03E-24 T 29-03-2018 CVS42_RS12455 f7def9bad989a56b46d897f062633ea9 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.4E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS12455 f7def9bad989a56b46d897f062633ea9 290 Pfam PF03466 LysR substrate binding domain 87 274 3.1E-21 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS04565 77a8355d5252f1e0512f3eed16c23086 254 Pfam PF12048 Protein of unknown function (DUF3530) 105 249 3.0E-21 T 29-03-2018 IPR022529 Protein of unknown function DUF3530 CVS42_RS05340 2b46617fe389e9b7c2476293f4aaf7be 205 Gene3D G3DSA:1.10.3480.10 10 195 5.7E-36 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CVS42_RS05340 2b46617fe389e9b7c2476293f4aaf7be 205 Pfam PF02613 Nitrate reductase delta subunit 63 165 3.4E-27 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CVS42_RS05340 2b46617fe389e9b7c2476293f4aaf7be 205 SUPERFAMILY SSF89155 13 193 1.11E-44 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CVS42_RS12020 70f054a8cc398f3c2ac572a621403136 196 SUPERFAMILY SSF140478 31 181 8.5E-54 T 29-03-2018 IPR023353 LemA-like domain CVS42_RS12020 70f054a8cc398f3c2ac572a621403136 196 Gene3D G3DSA:1.20.1440.20 18 195 7.5E-57 T 29-03-2018 CVS42_RS12020 70f054a8cc398f3c2ac572a621403136 196 Pfam PF04011 LemA family 16 195 2.8E-66 T 29-03-2018 IPR007156 LemA CVS42_RS06495 ea820fbdfc903563b84073bc9adfb425 299 Gene3D G3DSA:3.40.190.10 177 261 8.7E-28 T 29-03-2018 CVS42_RS06495 ea820fbdfc903563b84073bc9adfb425 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.7E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS06495 ea820fbdfc903563b84073bc9adfb425 299 Gene3D G3DSA:1.10.10.10 3 84 3.8E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS06495 ea820fbdfc903563b84073bc9adfb425 299 Pfam PF03466 LysR substrate binding domain 88 289 2.2E-46 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS06495 ea820fbdfc903563b84073bc9adfb425 299 SUPERFAMILY SSF46785 5 111 1.34E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS06495 ea820fbdfc903563b84073bc9adfb425 299 SUPERFAMILY SSF53850 88 290 2.17E-49 T 29-03-2018 CVS42_RS06495 ea820fbdfc903563b84073bc9adfb425 299 Gene3D G3DSA:3.40.190.10 89 176 1.1E-13 T 29-03-2018 CVS42_RS12985 c53d013a4902e97235639d48620eb050 331 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 68 291 9.3E-19 T 29-03-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 CVS42_RS04635 b7a97adfacc2a69cd810faa0a487328c 307 Gene3D G3DSA:1.20.1560.10 18 209 2.9E-7 T 29-03-2018 CVS42_RS04635 b7a97adfacc2a69cd810faa0a487328c 307 Pfam PF13748 ABC transporter transmembrane region 27 262 7.4E-93 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CVS42_RS04635 b7a97adfacc2a69cd810faa0a487328c 307 SUPERFAMILY SSF90123 26 298 9.81E-16 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CVS42_RS04635 b7a97adfacc2a69cd810faa0a487328c 307 Gene3D G3DSA:1.20.1560.10 210 300 0.018 T 29-03-2018 CVS42_RS11555 dfc0fb61130ac344013815ec34487e16 453 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 18 431 5.9E-161 T 29-03-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW CVS42_RS11555 dfc0fb61130ac344013815ec34487e16 453 SUPERFAMILY SSF102114 53 428 6.02E-70 T 29-03-2018 CVS42_RS11555 dfc0fb61130ac344013815ec34487e16 453 Pfam PF04055 Radical SAM superfamily 60 230 7.6E-12 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CVS42_RS11555 dfc0fb61130ac344013815ec34487e16 453 Gene3D G3DSA:3.20.20.70 52 331 1.3E-26 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS11555 dfc0fb61130ac344013815ec34487e16 453 SMART SM00729 55 274 8.6E-35 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CVS42_RS07165 66b2b2ebcc2e0290a011cecab4149fc6 284 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 228 242 - T 29-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CVS42_RS07165 66b2b2ebcc2e0290a011cecab4149fc6 284 Gene3D G3DSA:3.40.190.80 167 284 2.1E-37 T 29-03-2018 CVS42_RS07165 66b2b2ebcc2e0290a011cecab4149fc6 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 98 114 5.5E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS07165 66b2b2ebcc2e0290a011cecab4149fc6 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 147 170 5.5E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS07165 66b2b2ebcc2e0290a011cecab4149fc6 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 194 215 5.5E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS07165 66b2b2ebcc2e0290a011cecab4149fc6 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 225 249 5.5E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS07165 66b2b2ebcc2e0290a011cecab4149fc6 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 77 93 5.5E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS07165 66b2b2ebcc2e0290a011cecab4149fc6 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 55 75 5.5E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS07165 66b2b2ebcc2e0290a011cecab4149fc6 284 Pfam PF00459 Inositol monophosphatase family 18 278 4.7E-72 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CVS42_RS07165 66b2b2ebcc2e0290a011cecab4149fc6 284 PRINTS PR01959 SuhB family inositol monophosphatase signature 121 140 2.4E-36 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CVS42_RS07165 66b2b2ebcc2e0290a011cecab4149fc6 284 PRINTS PR01959 SuhB family inositol monophosphatase signature 215 227 2.4E-36 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CVS42_RS07165 66b2b2ebcc2e0290a011cecab4149fc6 284 PRINTS PR01959 SuhB family inositol monophosphatase signature 34 56 2.4E-36 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CVS42_RS07165 66b2b2ebcc2e0290a011cecab4149fc6 284 PRINTS PR01959 SuhB family inositol monophosphatase signature 173 199 2.4E-36 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CVS42_RS07165 66b2b2ebcc2e0290a011cecab4149fc6 284 Gene3D G3DSA:3.30.540.10 17 166 1.2E-47 T 29-03-2018 CVS42_RS07165 66b2b2ebcc2e0290a011cecab4149fc6 284 SUPERFAMILY SSF56655 17 278 3.01E-86 T 29-03-2018 CVS42_RS15055 6816ef7b0ac3d07ccd841410d8e35d0a 406 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 29-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 CVS42_RS15055 6816ef7b0ac3d07ccd841410d8e35d0a 406 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 404 1.8E-164 T 29-03-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 CVS42_RS15055 6816ef7b0ac3d07ccd841410d8e35d0a 406 Gene3D G3DSA:1.20.1180.10 56 115 0.001 T 29-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CVS42_RS15055 6816ef7b0ac3d07ccd841410d8e35d0a 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 2.1E-41 T 29-03-2018 IPR003004 GspF/PilC family CVS42_RS15055 6816ef7b0ac3d07ccd841410d8e35d0a 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 2.1E-41 T 29-03-2018 IPR003004 GspF/PilC family CVS42_RS15055 6816ef7b0ac3d07ccd841410d8e35d0a 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 2.1E-41 T 29-03-2018 IPR003004 GspF/PilC family CVS42_RS15055 6816ef7b0ac3d07ccd841410d8e35d0a 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 2.1E-41 T 29-03-2018 IPR003004 GspF/PilC family CVS42_RS15055 6816ef7b0ac3d07ccd841410d8e35d0a 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 394 5.4E-26 T 29-03-2018 IPR018076 Type II secretion system F domain CVS42_RS15055 6816ef7b0ac3d07ccd841410d8e35d0a 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 6.2E-32 T 29-03-2018 IPR018076 Type II secretion system F domain CVS42_RS13850 861e85567e016741a351a0a6b0e61eb4 542 Gene3D G3DSA:1.10.3720.10 34 259 2.9E-16 T 29-03-2018 CVS42_RS13850 861e85567e016741a351a0a6b0e61eb4 542 SUPERFAMILY SSF161098 3 256 9.81E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS13850 861e85567e016741a351a0a6b0e61eb4 542 Gene3D G3DSA:1.10.3720.10 322 534 9.1E-14 T 29-03-2018 CVS42_RS13850 861e85567e016741a351a0a6b0e61eb4 542 SUPERFAMILY SSF161098 290 528 1.21E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS01850 31bbf550c154fccc064d1f50aa2d3b1b 259 SUPERFAMILY SSF53633 4 257 5.37E-62 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS01850 31bbf550c154fccc064d1f50aa2d3b1b 259 PIRSF PIRSF000728 1 258 3.7E-69 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CVS42_RS01850 31bbf550c154fccc064d1f50aa2d3b1b 259 Gene3D G3DSA:3.40.1160.10 1 259 3.5E-45 T 29-03-2018 CVS42_RS01850 31bbf550c154fccc064d1f50aa2d3b1b 259 TIGRFAM TIGR00761 argB: acetylglutamate kinase 5 234 8.7E-64 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CVS42_RS01850 31bbf550c154fccc064d1f50aa2d3b1b 259 Pfam PF00696 Amino acid kinase family 5 236 2.4E-41 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CVS42_RS01850 31bbf550c154fccc064d1f50aa2d3b1b 259 Hamap MF_00082_B Acetylglutamate kinase [argB]. 2 259 26.508 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CVS42_RS19105 47ec3b9802ba0bc0cfa8372ff79b0ee2 196 SUPERFAMILY SSF50022 30 193 5.76E-45 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CVS42_RS19105 47ec3b9802ba0bc0cfa8372ff79b0ee2 196 Gene3D G3DSA:1.20.5.510 4 33 9.4E-16 T 29-03-2018 CVS42_RS19105 47ec3b9802ba0bc0cfa8372ff79b0ee2 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 3 40 4.4E-15 T 29-03-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 CVS42_RS19105 47ec3b9802ba0bc0cfa8372ff79b0ee2 196 Gene3D G3DSA:2.102.10.10 34 196 3.6E-43 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CVS42_RS19105 47ec3b9802ba0bc0cfa8372ff79b0ee2 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 9.2E-8 T 29-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CVS42_RS19105 47ec3b9802ba0bc0cfa8372ff79b0ee2 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 9.2E-8 T 29-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CVS42_RS19105 47ec3b9802ba0bc0cfa8372ff79b0ee2 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 9.2E-8 T 29-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CVS42_RS19105 47ec3b9802ba0bc0cfa8372ff79b0ee2 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 3.5E-74 T 29-03-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 CVS42_RS19105 47ec3b9802ba0bc0cfa8372ff79b0ee2 196 Pfam PF00355 Rieske [2Fe-2S] domain 59 176 3.4E-11 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CVS42_RS11875 f38a5a8da4ce8ecd19c1e0a21264c249 233 SUPERFAMILY SSF51366 3 229 3.05E-76 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CVS42_RS11875 f38a5a8da4ce8ecd19c1e0a21264c249 233 Gene3D G3DSA:3.20.20.70 1 231 4.0E-69 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS11875 f38a5a8da4ce8ecd19c1e0a21264c249 233 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 39.82 T 29-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS11875 f38a5a8da4ce8ecd19c1e0a21264c249 233 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 29-03-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS11875 f38a5a8da4ce8ecd19c1e0a21264c249 233 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 7 226 5.0E-59 T 29-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS11875 f38a5a8da4ce8ecd19c1e0a21264c249 233 SMART SM00934 5 226 2.1E-96 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS11875 f38a5a8da4ce8ecd19c1e0a21264c249 233 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 223 4.3E-51 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CVS42_RS10660 901f3038e6a1a0a942df7a407167d612 271 SUPERFAMILY SSF161098 65 255 5.49E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS10660 901f3038e6a1a0a942df7a407167d612 271 Gene3D G3DSA:1.10.3720.10 6 269 6.8E-26 T 29-03-2018 CVS42_RS10660 901f3038e6a1a0a942df7a407167d612 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 262 2.9E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS12560 cb0b6d2b1c154e14c39183775f0eb81f 202 Pfam PF07681 DoxX 23 111 5.1E-13 T 29-03-2018 IPR032808 DoxX family CVS42_RS12180 ad240782f716b6262dc6892d4e708ea1 160 Gene3D G3DSA:3.90.420.10 16 159 1.8E-24 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CVS42_RS12180 ad240782f716b6262dc6892d4e708ea1 160 SUPERFAMILY SSF56524 38 158 9.94E-18 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CVS42_RS18170 7dc2c538231b5b8d5754d1ab4e6b0dc6 310 Gene3D G3DSA:1.10.10.10 1 85 1.5E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18170 7dc2c538231b5b8d5754d1ab4e6b0dc6 310 SUPERFAMILY SSF46785 2 85 2.3E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18170 7dc2c538231b5b8d5754d1ab4e6b0dc6 310 Pfam PF03466 LysR substrate binding domain 97 286 4.3E-11 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS18170 7dc2c538231b5b8d5754d1ab4e6b0dc6 310 SUPERFAMILY SSF53850 90 287 7.14E-23 T 29-03-2018 CVS42_RS18170 7dc2c538231b5b8d5754d1ab4e6b0dc6 310 Gene3D G3DSA:3.40.190.10 90 220 1.7E-4 T 29-03-2018 CVS42_RS18170 7dc2c538231b5b8d5754d1ab4e6b0dc6 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.2E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS16720 000c8eebbc775e567549df09e54863e8 518 SUPERFAMILY SSF53850 26 514 3.41E-122 T 29-03-2018 CVS42_RS16720 000c8eebbc775e567549df09e54863e8 518 Gene3D G3DSA:3.90.76.10 33 176 1.2E-32 T 29-03-2018 CVS42_RS16720 000c8eebbc775e567549df09e54863e8 518 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site CVS42_RS16720 000c8eebbc775e567549df09e54863e8 518 PIRSF PIRSF002741 23 510 3.0E-91 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CVS42_RS16720 000c8eebbc775e567549df09e54863e8 518 Gene3D G3DSA:3.10.105.10 281 488 1.1E-50 T 29-03-2018 CVS42_RS16720 000c8eebbc775e567549df09e54863e8 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 429 8.0E-83 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CVS42_RS16720 000c8eebbc775e567549df09e54863e8 518 Gene3D G3DSA:3.40.190.10 179 280 8.3E-22 T 29-03-2018 CVS42_RS01300 a6d7dee72b7edf8260c2f501b71af437 236 Gene3D G3DSA:1.10.10.10 36 101 0.023 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS01300 a6d7dee72b7edf8260c2f501b71af437 236 SUPERFAMILY SSF46785 47 95 6.96E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS06625 31ddb684aaedc323009b7dae839ffab5 202 Pfam PF07273 Protein of unknown function (DUF1439) 42 194 1.1E-43 T 29-03-2018 IPR010835 Protein of unknown function DUF1439 CVS42_RS02405 541561395f866a754d23d99053fc2856 345 SUPERFAMILY SSF52266 27 239 3.67E-20 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain CVS42_RS02405 541561395f866a754d23d99053fc2856 345 SUPERFAMILY SSF52266 302 339 3.67E-20 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain CVS42_RS02405 541561395f866a754d23d99053fc2856 345 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 28 330 6.7E-19 T 29-03-2018 IPR001087 GDSL lipase/esterase GO:0016788 CVS42_RS02405 541561395f866a754d23d99053fc2856 345 Gene3D G3DSA:3.40.50.1110 11 344 3.0E-60 T 29-03-2018 CVS42_RS02405 541561395f866a754d23d99053fc2856 345 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 28 39 - T 29-03-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 CVS42_RS12585 3395eaa941ea7fc744e80eb6f5b1ba74 36 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 27 4.7E-9 T 29-03-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 CVS42_RS12585 3395eaa941ea7fc744e80eb6f5b1ba74 36 Pfam PF08173 Membrane bound YbgT-like protein 1 27 8.2E-12 T 29-03-2018 IPR012994 Membrane bound YbgT-like CVS42_RS18535 4ad0f28e3cab2aa5e0082bd346e2c385 652 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 28 624 4.2E-242 T 29-03-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0042710 CVS42_RS18535 4ad0f28e3cab2aa5e0082bd346e2c385 652 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 301 604 2.5E-119 T 29-03-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal CVS42_RS18535 4ad0f28e3cab2aa5e0082bd346e2c385 652 Gene3D G3DSA:3.20.20.370 52 475 4.1E-46 T 29-03-2018 CVS42_RS18535 4ad0f28e3cab2aa5e0082bd346e2c385 652 SUPERFAMILY SSF88713 50 333 8.01E-36 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CVS42_RS18535 4ad0f28e3cab2aa5e0082bd346e2c385 652 Pfam PF01522 Polysaccharide deacetylase 86 251 3.7E-25 T 29-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CVS42_RS06445 d60eb79f1d03e8df7234b9d620cf1859 252 SUPERFAMILY SSF53474 7 250 8.51E-48 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS06445 d60eb79f1d03e8df7234b9d620cf1859 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 7.0E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS06445 d60eb79f1d03e8df7234b9d620cf1859 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 40 55 7.0E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS06445 d60eb79f1d03e8df7234b9d620cf1859 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 7.0E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS06445 d60eb79f1d03e8df7234b9d620cf1859 252 Pfam PF00561 alpha/beta hydrolase fold 15 132 4.0E-18 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS06445 d60eb79f1d03e8df7234b9d620cf1859 252 Gene3D G3DSA:3.40.50.1820 2 252 5.5E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS06650 c76d7fffb7d5693ab40a502ae66fb84b 80 SUPERFAMILY SSF58042 18 79 7.33E-19 T 29-03-2018 CVS42_RS06650 c76d7fffb7d5693ab40a502ae66fb84b 80 Gene3D G3DSA:1.20.5.190 24 75 6.3E-13 T 29-03-2018 CVS42_RS06650 c76d7fffb7d5693ab40a502ae66fb84b 80 Pfam PF04728 Lipoprotein leucine-zipper 29 80 2.7E-17 T 29-03-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 CVS42_RS06650 c76d7fffb7d5693ab40a502ae66fb84b 80 PIRSF PIRSF002855 1 80 7.2E-23 T 29-03-2018 IPR016367 Murein-lipoprotein CVS42_RS20430 c460dc991aef94e8fe570d86ac537c5b 198 Gene3D G3DSA:3.40.50.360 1 180 5.2E-33 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS20430 c460dc991aef94e8fe570d86ac537c5b 198 Pfam PF02525 Flavodoxin-like fold 2 171 2.6E-44 T 29-03-2018 IPR003680 Flavodoxin-like fold CVS42_RS20430 c460dc991aef94e8fe570d86ac537c5b 198 SUPERFAMILY SSF52218 1 179 7.22E-50 T 29-03-2018 IPR029039 Flavoprotein-like domain CVS42_RS10675 612462dc268ef476ba845e4fa2fd7426 179 Pfam PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE 30 171 1.6E-38 T 29-03-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE CVS42_RS10675 612462dc268ef476ba845e4fa2fd7426 179 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 36 158 1.0E-31 T 29-03-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE CVS42_RS10675 612462dc268ef476ba845e4fa2fd7426 179 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 34 171 3.1E-44 T 29-03-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE CVS42_RS17660 d99e6f9a2015a6afb22c6fc4884210dc 158 Pfam PF04186 FxsA cytoplasmic membrane protein 7 109 1.7E-32 T 29-03-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 CVS42_RS09510 3362cb2671dc6a3958011926b0b770c4 90 Pfam PF00708 Acylphosphatase 7 87 4.5E-24 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CVS42_RS09510 3362cb2671dc6a3958011926b0b770c4 90 Gene3D G3DSA:3.30.70.100 1 90 4.0E-25 T 29-03-2018 CVS42_RS09510 3362cb2671dc6a3958011926b0b770c4 90 SUPERFAMILY SSF54975 4 87 1.53E-25 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CVS42_RS09510 3362cb2671dc6a3958011926b0b770c4 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 29-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CVS42_RS16285 429822414618fe7ecee68db0caede451 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 196 4.1E-104 T 29-03-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CVS42_RS16285 429822414618fe7ecee68db0caede451 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.362 T 29-03-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CVS42_RS16285 429822414618fe7ecee68db0caede451 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 7.7E-60 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CVS42_RS16285 429822414618fe7ecee68db0caede451 198 PIRSF PIRSF006102 1 198 8.0E-65 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CVS42_RS13510 7cfa12e33cf06f28ea2207bd6a07e3b6 253 Gene3D G3DSA:3.40.1390.30 111 224 9.5E-34 T 29-03-2018 CVS42_RS13510 7cfa12e33cf06f28ea2207bd6a07e3b6 253 SUPERFAMILY SSF102705 4 252 5.49E-84 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CVS42_RS13510 7cfa12e33cf06f28ea2207bd6a07e3b6 253 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 4 252 5.1E-73 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CVS42_RS13510 7cfa12e33cf06f28ea2207bd6a07e3b6 253 Gene3D G3DSA:3.40.1390.30 2 110 3.4E-28 T 29-03-2018 CVS42_RS13510 7cfa12e33cf06f28ea2207bd6a07e3b6 253 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 237 1.4E-62 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CVS42_RS05170 918e50f08543b0ee7c35885e3ea81199 573 Gene3D G3DSA:1.50.10.10 96 548 1.7E-57 T 29-03-2018 CVS42_RS05170 918e50f08543b0ee7c35885e3ea81199 573 Pfam PF02927 Cellulase N-terminal ig-like domain 4 80 5.0E-11 T 29-03-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 CVS42_RS05170 918e50f08543b0ee7c35885e3ea81199 573 Gene3D G3DSA:2.60.40.10 1 95 7.6E-22 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS05170 918e50f08543b0ee7c35885e3ea81199 573 Pfam PF00759 Glycosyl hydrolase family 9 103 503 3.5E-20 T 29-03-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CVS42_RS05170 918e50f08543b0ee7c35885e3ea81199 573 SUPERFAMILY SSF48208 86 565 3.52E-78 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CVS42_RS05170 918e50f08543b0ee7c35885e3ea81199 573 SUPERFAMILY SSF81296 2 96 2.73E-16 T 29-03-2018 IPR014756 Immunoglobulin E-set CVS42_RS00195 56fc299d3993a3acf553bd88d328b197 171 SMART SM00458 46 155 3.0E-10 T 29-03-2018 IPR000772 Ricin B, lectin domain CVS42_RS00195 56fc299d3993a3acf553bd88d328b197 171 SUPERFAMILY SSF50370 52 153 1.93E-17 T 29-03-2018 IPR000772 Ricin B, lectin domain CVS42_RS00195 56fc299d3993a3acf553bd88d328b197 171 Pfam PF00652 Ricin-type beta-trefoil lectin domain 55 152 3.3E-12 T 29-03-2018 IPR000772 Ricin B, lectin domain CVS42_RS00195 56fc299d3993a3acf553bd88d328b197 171 Gene3D G3DSA:2.80.10.50 45 156 1.0E-17 T 29-03-2018 CVS42_RS00205 dad9febd8d1f235079df6495b4d7cb6f 445 SUPERFAMILY SSF103473 18 438 3.92E-60 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS00205 dad9febd8d1f235079df6495b4d7cb6f 445 PIRSF PIRSF002808 12 444 1.6E-99 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CVS42_RS00205 dad9febd8d1f235079df6495b4d7cb6f 445 Gene3D G3DSA:1.20.1250.20 238 441 8.1E-20 T 29-03-2018 CVS42_RS00205 dad9febd8d1f235079df6495b4d7cb6f 445 Gene3D G3DSA:1.20.1250.20 20 218 3.6E-26 T 29-03-2018 CVS42_RS00205 dad9febd8d1f235079df6495b4d7cb6f 445 Pfam PF07690 Major Facilitator Superfamily 37 391 4.6E-40 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS02905 359e18c7a5ae42d7771684a7fb904422 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 85 111 8.8E-15 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CVS42_RS02905 359e18c7a5ae42d7771684a7fb904422 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 417 437 8.8E-15 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CVS42_RS02905 359e18c7a5ae42d7771684a7fb904422 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 8.8E-15 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CVS42_RS02905 359e18c7a5ae42d7771684a7fb904422 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 8.8E-15 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CVS42_RS02905 359e18c7a5ae42d7771684a7fb904422 437 SUPERFAMILY SSF161070 4 436 6.54E-123 T 29-03-2018 CVS42_RS02905 359e18c7a5ae42d7771684a7fb904422 437 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CVS42_RS02905 359e18c7a5ae42d7771684a7fb904422 437 Pfam PF00209 Sodium:neurotransmitter symporter family 150 435 2.5E-29 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CVS42_RS02905 359e18c7a5ae42d7771684a7fb904422 437 Pfam PF00209 Sodium:neurotransmitter symporter family 4 121 5.2E-22 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CVS42_RS11885 2c7ec37aa71ae0afd37e74bee78f2698 94 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 20.594 T 29-03-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 CVS42_RS11885 2c7ec37aa71ae0afd37e74bee78f2698 94 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 86 1.6E-16 T 29-03-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 CVS42_RS20405 bbbf7dc3450f0ffedb87a0d9ecfafd93 209 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 21 201 7.0E-62 T 29-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CVS42_RS20405 bbbf7dc3450f0ffedb87a0d9ecfafd93 209 Pfam PF03602 Conserved hypothetical protein 95 24 199 1.8E-62 T 29-03-2018 CVS42_RS20405 bbbf7dc3450f0ffedb87a0d9ecfafd93 209 Gene3D G3DSA:3.40.50.150 12 209 6.3E-41 T 29-03-2018 CVS42_RS20405 bbbf7dc3450f0ffedb87a0d9ecfafd93 209 SUPERFAMILY SSF53335 24 201 1.28E-54 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS20405 bbbf7dc3450f0ffedb87a0d9ecfafd93 209 PIRSF PIRSF004553 23 203 8.8E-57 T 29-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CVS42_RS20405 bbbf7dc3450f0ffedb87a0d9ecfafd93 209 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 136 142 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CVS42_RS17300 4c674746cb7f3c51cfc5b795c6bc3911 246 Gene3D G3DSA:3.30.420.40 116 246 2.8E-28 T 29-03-2018 CVS42_RS17300 4c674746cb7f3c51cfc5b795c6bc3911 246 Pfam PF00480 ROK family 4 165 5.3E-22 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CVS42_RS17300 4c674746cb7f3c51cfc5b795c6bc3911 246 SUPERFAMILY SSF53067 1 244 1.95E-37 T 29-03-2018 CVS42_RS17300 4c674746cb7f3c51cfc5b795c6bc3911 246 Gene3D G3DSA:3.30.420.40 1 115 7.0E-25 T 29-03-2018 CVS42_RS01615 e848054a530e4f000aa080612b5f2710 709 Gene3D G3DSA:1.10.10.10 2 79 9.0E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS01615 e848054a530e4f000aa080612b5f2710 709 Pfam PF17289 Terminase RNaseH-like domain 427 585 4.9E-28 T 29-03-2018 IPR035421 Terminase, large subunit gp17-like CVS42_RS01615 e848054a530e4f000aa080612b5f2710 709 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 6 63 3.3E-11 T 29-03-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 CVS42_RS01615 e848054a530e4f000aa080612b5f2710 709 Pfam PF03237 Terminase-like family 179 400 4.1E-44 T 29-03-2018 CVS42_RS07630 c660a877aadfe34755919ae16c809945 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.5E-37 T 29-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CVS42_RS07630 c660a877aadfe34755919ae16c809945 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 37.29 T 29-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 CVS42_RS07630 c660a877aadfe34755919ae16c809945 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.1E-25 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CVS42_RS07630 c660a877aadfe34755919ae16c809945 107 SUPERFAMILY SSF89360 1 96 3.66E-33 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CVS42_RS07630 c660a877aadfe34755919ae16c809945 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.3E-58 T 29-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 CVS42_RS07630 c660a877aadfe34755919ae16c809945 107 Gene3D G3DSA:2.60.300.12 2 107 4.0E-38 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CVS42_RS07630 c660a877aadfe34755919ae16c809945 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 29-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CVS42_RS12205 a56cbf3bf16bd3504d4790c58e64e740 441 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 438 8.4E-100 T 29-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CVS42_RS12205 a56cbf3bf16bd3504d4790c58e64e740 441 Pfam PF02321 Outer membrane efflux protein 239 423 5.9E-28 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CVS42_RS12205 a56cbf3bf16bd3504d4790c58e64e740 441 Pfam PF02321 Outer membrane efflux protein 25 217 3.9E-23 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CVS42_RS12205 a56cbf3bf16bd3504d4790c58e64e740 441 Gene3D G3DSA:1.20.1600.10 17 431 1.3E-62 T 29-03-2018 CVS42_RS12205 a56cbf3bf16bd3504d4790c58e64e740 441 SUPERFAMILY SSF56954 5 426 8.76E-83 T 29-03-2018 CVS42_RS01355 05c2267f3c2c0d79421584b25b1328d8 217 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 188 7.0E-24 T 29-03-2018 CVS42_RS01355 05c2267f3c2c0d79421584b25b1328d8 217 Gene3D G3DSA:1.20.1440.100 16 80 3.0E-21 T 29-03-2018 CVS42_RS01355 05c2267f3c2c0d79421584b25b1328d8 217 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 187 1.9E-37 T 29-03-2018 CVS42_RS01355 05c2267f3c2c0d79421584b25b1328d8 217 Gene3D G3DSA:3.40.50.1000 81 207 5.7E-9 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS01355 05c2267f3c2c0d79421584b25b1328d8 217 SUPERFAMILY SSF56784 2 206 1.29E-27 T 29-03-2018 IPR023214 HAD-like domain CVS42_RS01355 05c2267f3c2c0d79421584b25b1328d8 217 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 199 2.9E-50 T 29-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CVS42_RS08965 c7cfad0689ba36c27642c01279a204df 85 Pfam PF06803 Protein of unknown function (DUF1232) 28 63 9.6E-11 T 29-03-2018 IPR010652 Protein of unknown function DUF1232 CVS42_RS05080 b8d1876180138f42cf0e9c0d6f0a3e93 251 SUPERFAMILY SSF51735 11 247 1.61E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS05080 b8d1876180138f42cf0e9c0d6f0a3e93 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 183 0.0012 T 29-03-2018 CVS42_RS05080 b8d1876180138f42cf0e9c0d6f0a3e93 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 160 2.7E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS05080 b8d1876180138f42cf0e9c0d6f0a3e93 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 2.7E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS05080 b8d1876180138f42cf0e9c0d6f0a3e93 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 189 2.7E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS05080 b8d1876180138f42cf0e9c0d6f0a3e93 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 2.7E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS05080 b8d1876180138f42cf0e9c0d6f0a3e93 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 2.7E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS05080 b8d1876180138f42cf0e9c0d6f0a3e93 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 157 185 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CVS42_RS05080 b8d1876180138f42cf0e9c0d6f0a3e93 251 Gene3D G3DSA:3.40.50.720 3 250 1.5E-55 T 29-03-2018 CVS42_RS05080 b8d1876180138f42cf0e9c0d6f0a3e93 251 Pfam PF00106 short chain dehydrogenase 14 213 4.8E-48 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS10345 29ff143a3e68af887f8550bdf6203b32 503 Pfam PF13584 Oxygen tolerance 31 372 1.6E-27 T 29-03-2018 IPR025738 Aerotolerance-related protein BatD CVS42_RS08910 b52ac534c4f27af151d263c504e4dec8 167 Pfam PF01863 Protein of unknown function DUF45 92 153 1.3E-13 T 29-03-2018 IPR002725 Protein of unknown function DUF45 CVS42_RS16270 3fd2ab57c69981040c07a329195fe418 409 Pfam PF03116 NQR2, RnfD, RnfE family 41 401 2.1E-105 T 29-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 CVS42_RS16270 3fd2ab57c69981040c07a329195fe418 409 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 4 404 4.7E-192 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CVS42_RS16270 3fd2ab57c69981040c07a329195fe418 409 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 408 36.646 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CVS42_RS16270 3fd2ab57c69981040c07a329195fe418 409 PIRSF PIRSF016055 1 409 1.1E-195 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CVS42_RS09805 16419c538f123a0763110476fc2f325a 152 Pfam PF13185 GAF domain 34 143 3.9E-11 T 29-03-2018 IPR003018 GAF domain GO:0005515 CVS42_RS09805 16419c538f123a0763110476fc2f325a 152 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 91 108 - T 29-03-2018 IPR000614 Free Met sulfoxide reductase conserved site CVS42_RS09805 16419c538f123a0763110476fc2f325a 152 SUPERFAMILY SSF55781 4 148 2.26E-41 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS09805 16419c538f123a0763110476fc2f325a 152 Gene3D G3DSA:3.30.450.40 4 151 9.9E-23 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS11055 797828da835f48cc5e91d3ff9cac66f8 518 Pfam PF12421 Fibronectin type III protein 348 457 1.8E-8 T 29-03-2018 IPR021034 Domain of unknown function, DUF3672 CVS42_RS11055 797828da835f48cc5e91d3ff9cac66f8 518 Gene3D G3DSA:2.60.40.10 70 174 8.9E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS11055 797828da835f48cc5e91d3ff9cac66f8 518 Pfam PF09327 Domain of unknown function (DUF1983) 198 268 1.1E-10 T 29-03-2018 IPR015406 Domain of unknown function DUF1983 CVS42_RS03225 d596d8fc6cd699564cacf52e1100b704 204 SUPERFAMILY SSF48498 92 202 1.91E-14 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CVS42_RS03225 d596d8fc6cd699564cacf52e1100b704 204 SUPERFAMILY SSF46689 8 92 5.13E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS03225 d596d8fc6cd699564cacf52e1100b704 204 Gene3D G3DSA:1.10.357.10 70 204 2.5E-14 T 29-03-2018 CVS42_RS03225 d596d8fc6cd699564cacf52e1100b704 204 Gene3D G3DSA:1.10.260.40 44 69 6.3E-11 T 29-03-2018 CVS42_RS03225 d596d8fc6cd699564cacf52e1100b704 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 1.2E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS03225 d596d8fc6cd699564cacf52e1100b704 204 Gene3D G3DSA:1.10.10.60 1 43 3.1E-12 T 29-03-2018 CVS42_RS03225 d596d8fc6cd699564cacf52e1100b704 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 1.1E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS03225 d596d8fc6cd699564cacf52e1100b704 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 1.1E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS21785 359f95b9d381910589e1bb36c77702f9 254 SUPERFAMILY SSF141868 24 241 6.15E-59 T 29-03-2018 IPR001633 EAL domain CVS42_RS21785 359f95b9d381910589e1bb36c77702f9 254 SMART SM00052 1 250 2.8E-25 T 29-03-2018 IPR001633 EAL domain CVS42_RS21785 359f95b9d381910589e1bb36c77702f9 254 Gene3D G3DSA:3.20.20.450 17 247 1.2E-55 T 29-03-2018 IPR001633 EAL domain CVS42_RS21785 359f95b9d381910589e1bb36c77702f9 254 Pfam PF00563 EAL domain 24 241 7.4E-50 T 29-03-2018 IPR001633 EAL domain CVS42_RS02455 4f855026c59fc964516518cedb360898 411 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 8 405 2.5E-128 T 29-03-2018 IPR017735 Type VI secretion system, FHA domain-containing protein CVS42_RS02455 4f855026c59fc964516518cedb360898 411 Pfam PF00498 FHA domain 34 101 6.3E-5 T 29-03-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CVS42_RS02455 4f855026c59fc964516518cedb360898 411 Gene3D G3DSA:2.60.200.20 4 110 4.6E-9 T 29-03-2018 CVS42_RS02455 4f855026c59fc964516518cedb360898 411 SUPERFAMILY SSF49879 9 107 1.56E-7 T 29-03-2018 IPR008984 SMAD/FHA domain GO:0005515 CVS42_RS18445 14210abee94db43bf0038b396448ed24 275 Gene3D G3DSA:3.40.190.10 146 253 1.3E-5 T 29-03-2018 CVS42_RS18445 14210abee94db43bf0038b396448ed24 275 SUPERFAMILY SSF53850 52 256 1.37E-16 T 29-03-2018 CVS42_RS18445 14210abee94db43bf0038b396448ed24 275 Gene3D G3DSA:3.40.190.10 12 140 0.001 T 29-03-2018 CVS42_RS18445 14210abee94db43bf0038b396448ed24 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 58 249 1.9E-6 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS17575 fe1db1432f79878dad4fb0c60c99a43a 96 Pfam PF07238 PilZ domain 7 94 2.6E-12 T 29-03-2018 IPR009875 PilZ domain GO:0035438 CVS42_RS17575 fe1db1432f79878dad4fb0c60c99a43a 96 Gene3D G3DSA:2.40.10.220 2 95 9.2E-14 T 29-03-2018 CVS42_RS17575 fe1db1432f79878dad4fb0c60c99a43a 96 SUPERFAMILY SSF141371 2 86 1.61E-14 T 29-03-2018 CVS42_RS19770 360f9cc4710b142b32284604b669db36 299 SUPERFAMILY SSF53850 104 256 1.07E-12 T 29-03-2018 CVS42_RS19770 360f9cc4710b142b32284604b669db36 299 Gene3D G3DSA:3.40.190.10 88 273 2.1E-5 T 29-03-2018 CVS42_RS06905 eecfeb53f34832680a9e71ad410598b0 607 Pfam PF01740 STAS domain 444 537 8.3E-14 T 29-03-2018 IPR002645 STAS domain CVS42_RS06905 eecfeb53f34832680a9e71ad410598b0 607 Pfam PF00916 Sulfate permease family 26 392 1.5E-85 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CVS42_RS06905 eecfeb53f34832680a9e71ad410598b0 607 SUPERFAMILY SSF52091 447 537 1.33E-9 T 29-03-2018 IPR002645 STAS domain CVS42_RS06905 eecfeb53f34832680a9e71ad410598b0 607 Gene3D G3DSA:3.30.750.24 422 559 4.5E-19 T 29-03-2018 IPR002645 STAS domain CVS42_RS20660 418e79c3b41aea463cf2e2f884b7b357 183 SMART SM00739 129 156 2.8E-6 T 29-03-2018 IPR005824 KOW CVS42_RS20660 418e79c3b41aea463cf2e2f884b7b357 183 SUPERFAMILY SSF50104 127 182 6.52E-19 T 29-03-2018 IPR008991 Translation protein SH3-like domain CVS42_RS20660 418e79c3b41aea463cf2e2f884b7b357 183 SUPERFAMILY SSF82679 9 119 2.09E-40 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CVS42_RS20660 418e79c3b41aea463cf2e2f884b7b357 183 Gene3D G3DSA:2.30.30.30 124 182 3.8E-21 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CVS42_RS20660 418e79c3b41aea463cf2e2f884b7b357 183 Pfam PF02357 Transcription termination factor nusG 9 114 2.8E-26 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CVS42_RS20660 418e79c3b41aea463cf2e2f884b7b357 183 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 8 183 25.202 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CVS42_RS20660 418e79c3b41aea463cf2e2f884b7b357 183 Gene3D G3DSA:3.30.70.940 8 121 1.2E-41 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CVS42_RS20660 418e79c3b41aea463cf2e2f884b7b357 183 SMART SM00738 8 117 3.2E-49 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CVS42_RS20660 418e79c3b41aea463cf2e2f884b7b357 183 PRINTS PR00338 Transcription termination factor NUSG signature 63 75 6.8E-21 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CVS42_RS20660 418e79c3b41aea463cf2e2f884b7b357 183 PRINTS PR00338 Transcription termination factor NUSG signature 141 156 6.8E-21 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CVS42_RS20660 418e79c3b41aea463cf2e2f884b7b357 183 PRINTS PR00338 Transcription termination factor NUSG signature 159 175 6.8E-21 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CVS42_RS20660 418e79c3b41aea463cf2e2f884b7b357 183 ProSitePatterns PS01014 Transcription termination factor nusG signature. 166 175 - T 29-03-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CVS42_RS20660 418e79c3b41aea463cf2e2f884b7b357 183 Pfam PF00467 KOW motif 132 162 4.5E-8 T 29-03-2018 IPR005824 KOW CVS42_RS20660 418e79c3b41aea463cf2e2f884b7b357 183 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 11 182 1.9E-69 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CVS42_RS13980 1bf4c76861ef77fc7b631185ee219837 345 SUPERFAMILY SSF111369 64 232 1.18E-16 T 29-03-2018 CVS42_RS13980 1bf4c76861ef77fc7b631185ee219837 345 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 289 5.6E-29 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CVS42_RS13980 1bf4c76861ef77fc7b631185ee219837 345 Pfam PF13533 Biotin-lipoyl like 64 109 3.1E-11 T 29-03-2018 CVS42_RS13980 1bf4c76861ef77fc7b631185ee219837 345 Gene3D G3DSA:1.20.1600.10 66 307 5.3E-19 T 29-03-2018 CVS42_RS17650 6ce99dfed6da441221c0c1f4c61b3ff4 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 2.1E-29 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CVS42_RS17650 6ce99dfed6da441221c0c1f4c61b3ff4 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.117 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CVS42_RS17650 6ce99dfed6da441221c0c1f4c61b3ff4 97 Gene3D G3DSA:2.30.33.40 1 96 1.4E-32 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CVS42_RS17650 6ce99dfed6da441221c0c1f4c61b3ff4 97 SMART SM00883 2 95 2.0E-48 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CVS42_RS17650 6ce99dfed6da441221c0c1f4c61b3ff4 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.3E-28 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CVS42_RS17650 6ce99dfed6da441221c0c1f4c61b3ff4 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.3E-28 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CVS42_RS17650 6ce99dfed6da441221c0c1f4c61b3ff4 97 PRINTS PR00297 10kDa chaperonin signature 82 95 1.3E-28 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CVS42_RS17650 6ce99dfed6da441221c0c1f4c61b3ff4 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.3E-28 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CVS42_RS17650 6ce99dfed6da441221c0c1f4c61b3ff4 97 SUPERFAMILY SSF50129 1 96 1.88E-30 T 29-03-2018 IPR011032 GroES-like CVS42_RS17650 6ce99dfed6da441221c0c1f4c61b3ff4 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 29-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CVS42_RS14205 2b97ed74cfa29fbc24aec2b8a111d2c4 112 Pfam PF04355 SmpA / OmlA family 30 98 5.0E-28 T 29-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CVS42_RS14205 2b97ed74cfa29fbc24aec2b8a111d2c4 112 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 6 106 31.208 T 29-03-2018 IPR026592 Outer membrane protein assembly factor BamE CVS42_RS14205 2b97ed74cfa29fbc24aec2b8a111d2c4 112 Gene3D G3DSA:3.30.1450.10 30 101 2.2E-14 T 29-03-2018 CVS42_RS13725 d41681ae6f6e01d44e9d922a2194189d 362 Pfam PF00676 Dehydrogenase E1 component 35 325 8.0E-79 T 29-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 CVS42_RS13725 d41681ae6f6e01d44e9d922a2194189d 362 Gene3D G3DSA:3.40.50.970 1 350 8.5E-81 T 29-03-2018 CVS42_RS13725 d41681ae6f6e01d44e9d922a2194189d 362 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 9 349 1.2E-135 T 29-03-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CVS42_RS13725 d41681ae6f6e01d44e9d922a2194189d 362 SUPERFAMILY SSF52518 3 350 1.02E-95 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CVS42_RS20050 f09747bb012bdd61119d316d55d4bae6 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 150 7.6E-10 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS20050 f09747bb012bdd61119d316d55d4bae6 211 SUPERFAMILY SSF51161 14 205 2.88E-48 T 29-03-2018 IPR011004 Trimeric LpxA-like CVS42_RS20050 f09747bb012bdd61119d316d55d4bae6 211 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 124 152 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CVS42_RS20050 f09747bb012bdd61119d316d55d4bae6 211 Gene3D G3DSA:2.160.10.10 9 211 8.5E-43 T 29-03-2018 CVS42_RS00750 85482ec39f147321fd40a1e6dd7bac5b 138 Pfam PF03724 META domain 25 128 1.0E-22 T 29-03-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ CVS42_RS17710 e45f0ab2068b140ba1224566b9b9385a 1586 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 332 454 7.9E-6 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CVS42_RS17710 e45f0ab2068b140ba1224566b9b9385a 1586 SUPERFAMILY SSF53474 13 178 2.21E-16 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS17710 e45f0ab2068b140ba1224566b9b9385a 1586 SMART SM00382 326 467 3.2E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS17710 e45f0ab2068b140ba1224566b9b9385a 1586 Gene3D G3DSA:1.25.10.20 1391 1554 0.028 T 29-03-2018 CVS42_RS17710 e45f0ab2068b140ba1224566b9b9385a 1586 Gene3D G3DSA:3.40.50.1820 6 253 6.0E-15 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS17710 e45f0ab2068b140ba1224566b9b9385a 1586 Gene3D G3DSA:3.40.50.300 283 467 1.2E-11 T 29-03-2018 CVS42_RS17710 e45f0ab2068b140ba1224566b9b9385a 1586 SUPERFAMILY SSF52540 312 478 1.5E-12 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11170 9cef104733b8bceedfef970b30522237 405 Pfam PF13252 Protein of unknown function (DUF4043) 50 398 5.1E-122 T 29-03-2018 IPR025267 Protein of unknown function DUF4043 CVS42_RS09440 e30071c1a6fb74e158c6258823090ff5 292 SUPERFAMILY SSF53474 14 289 1.02E-49 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS09440 e30071c1a6fb74e158c6258823090ff5 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 3.8E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS09440 e30071c1a6fb74e158c6258823090ff5 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 3.8E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS09440 e30071c1a6fb74e158c6258823090ff5 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 62 77 3.8E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS09440 e30071c1a6fb74e158c6258823090ff5 292 Pfam PF00561 alpha/beta hydrolase fold 38 277 6.3E-24 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS09440 e30071c1a6fb74e158c6258823090ff5 292 Gene3D G3DSA:3.40.50.1820 6 292 1.8E-42 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS02115 84a50ad34549714a41572626f726f288 328 Gene3D G3DSA:1.20.58.340 140 261 1.1E-22 T 29-03-2018 CVS42_RS02115 84a50ad34549714a41572626f726f288 328 Gene3D G3DSA:3.30.460.20 4 139 5.4E-16 T 29-03-2018 CVS42_RS02115 84a50ad34549714a41572626f726f288 328 SUPERFAMILY SSF143865 15 260 3.92E-51 T 29-03-2018 CVS42_RS02115 84a50ad34549714a41572626f726f288 328 Gene3D G3DSA:1.20.58.340 262 328 1.0E-16 T 29-03-2018 CVS42_RS02115 84a50ad34549714a41572626f726f288 328 SUPERFAMILY SSF144083 264 325 1.31E-13 T 29-03-2018 CVS42_RS02115 84a50ad34549714a41572626f726f288 328 Pfam PF01544 CorA-like Mg2+ transporter protein 42 323 1.4E-59 T 29-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CVS42_RS19090 db154a6b697c23c58760c5a9c5d5c8da 209 SUPERFAMILY SSF47616 82 206 1.42E-22 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CVS42_RS19090 db154a6b697c23c58760c5a9c5d5c8da 209 Gene3D G3DSA:1.20.1050.10 89 207 2.6E-15 T 29-03-2018 CVS42_RS19090 db154a6b697c23c58760c5a9c5d5c8da 209 SUPERFAMILY SSF52833 8 86 6.23E-21 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS19090 db154a6b697c23c58760c5a9c5d5c8da 209 Gene3D G3DSA:3.40.30.10 1 88 5.6E-22 T 29-03-2018 CVS42_RS19090 db154a6b697c23c58760c5a9c5d5c8da 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 192 4.0E-9 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CVS42_RS19090 db154a6b697c23c58760c5a9c5d5c8da 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 1.6E-14 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CVS42_RS18645 c99d5c5c8df8a1f31dc44c7b36c86eaf 423 Pfam PF03222 Tryptophan/tyrosine permease family 35 390 1.1E-8 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CVS42_RS20290 bbf2f2de3c6e2a1cadd424d03009fd69 406 Pfam PF00482 Type II secretion system (T2SS), protein F 70 193 6.1E-26 T 29-03-2018 IPR018076 Type II secretion system F domain CVS42_RS20290 bbf2f2de3c6e2a1cadd424d03009fd69 406 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 4.7E-29 T 29-03-2018 IPR018076 Type II secretion system F domain CVS42_RS20290 bbf2f2de3c6e2a1cadd424d03009fd69 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 3.8E-9 T 29-03-2018 IPR003004 GspF/PilC family CVS42_RS20290 bbf2f2de3c6e2a1cadd424d03009fd69 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 3.8E-9 T 29-03-2018 IPR003004 GspF/PilC family CVS42_RS20290 bbf2f2de3c6e2a1cadd424d03009fd69 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 3.8E-9 T 29-03-2018 IPR003004 GspF/PilC family CVS42_RS20290 bbf2f2de3c6e2a1cadd424d03009fd69 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 3.8E-9 T 29-03-2018 IPR003004 GspF/PilC family CVS42_RS20290 bbf2f2de3c6e2a1cadd424d03009fd69 406 Gene3D G3DSA:3.30.70.1120 82 169 1.1E-6 T 29-03-2018 CVS42_RS20290 bbf2f2de3c6e2a1cadd424d03009fd69 406 Gene3D G3DSA:3.30.70.1120 322 373 0.0055 T 29-03-2018 CVS42_RS08745 eb25c9f886d4b9fe5c6f1b29ae626e55 251 Pfam PF03942 DTW domain 33 217 8.1E-40 T 29-03-2018 IPR005636 DTW CVS42_RS08745 eb25c9f886d4b9fe5c6f1b29ae626e55 251 SMART SM01144 30 223 2.0E-71 T 29-03-2018 IPR005636 DTW CVS42_RS12745 1300bcb0a7572ac81d04c5660779cb87 326 SUPERFAMILY SSF53474 52 318 1.68E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS12745 1300bcb0a7572ac81d04c5660779cb87 326 Gene3D G3DSA:3.40.50.1820 52 323 9.8E-29 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS12745 1300bcb0a7572ac81d04c5660779cb87 326 Pfam PF12146 Serine aminopeptidase, S33 78 302 1.9E-20 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CVS42_RS15610 97c36ebc94c893c8194cf9edeaf5e0ca 351 SUPERFAMILY SSF111369 125 168 1.57E-12 T 29-03-2018 CVS42_RS15610 97c36ebc94c893c8194cf9edeaf5e0ca 351 SUPERFAMILY SSF111369 44 96 1.57E-12 T 29-03-2018 CVS42_RS15610 97c36ebc94c893c8194cf9edeaf5e0ca 351 Gene3D G3DSA:2.40.50.100 46 227 1.6E-15 T 29-03-2018 CVS42_RS15610 97c36ebc94c893c8194cf9edeaf5e0ca 351 Pfam PF13533 Biotin-lipoyl like 44 88 1.0E-14 T 29-03-2018 CVS42_RS16730 ec10b3ccc2dda0a3cbfe25d400500897 164 Gene3D G3DSA:1.10.3760.10 55 161 1.5E-33 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CVS42_RS16730 ec10b3ccc2dda0a3cbfe25d400500897 164 Pfam PF04608 Phosphatidylglycerophosphatase A 20 159 3.7E-50 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CVS42_RS16730 ec10b3ccc2dda0a3cbfe25d400500897 164 SUPERFAMILY SSF101307 14 160 1.1E-43 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CVS42_RS16730 ec10b3ccc2dda0a3cbfe25d400500897 164 PIRSF PIRSF006162 10 164 4.3E-46 T 29-03-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CVS42_RS09300 10aff82c6acd7ac6bc1cc70a504ef6cb 197 TIGRFAM TIGR03310 matur_MocA_YgfJ: molybdenum cofactor cytidylyltransferase 4 184 3.9E-58 T 29-03-2018 IPR017696 Molybdenum cofactor cytidylyltransferase KEGG: 00790+2.7.7.76|MetaCyc: PWY-6476 CVS42_RS09300 10aff82c6acd7ac6bc1cc70a504ef6cb 197 Pfam PF12804 MobA-like NTP transferase domain 5 160 4.6E-33 T 29-03-2018 IPR025877 MobA-like NTP transferase CVS42_RS09300 10aff82c6acd7ac6bc1cc70a504ef6cb 197 Gene3D G3DSA:3.90.550.10 2 185 1.3E-28 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS09300 10aff82c6acd7ac6bc1cc70a504ef6cb 197 SUPERFAMILY SSF53448 3 181 3.82E-26 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS07110 f2a7d2566e61fd4c3d8d4364d3d0993f 212 SUPERFAMILY SSF50475 15 212 1.48E-69 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CVS42_RS07110 f2a7d2566e61fd4c3d8d4364d3d0993f 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 2 212 1.4E-93 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CVS42_RS07110 f2a7d2566e61fd4c3d8d4364d3d0993f 212 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 182 195 - T 29-03-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CVS42_RS07110 f2a7d2566e61fd4c3d8d4364d3d0993f 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 10 212 38.847 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CVS42_RS07110 f2a7d2566e61fd4c3d8d4364d3d0993f 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 172 212 1.7E-19 T 29-03-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CVS42_RS07110 f2a7d2566e61fd4c3d8d4364d3d0993f 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 35 116 8.3E-24 T 29-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CVS42_RS07110 f2a7d2566e61fd4c3d8d4364d3d0993f 212 Gene3D G3DSA:2.30.110.10 11 212 9.2E-70 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CVS42_RS07110 f2a7d2566e61fd4c3d8d4364d3d0993f 212 PIRSF PIRSF000190 1 212 4.2E-80 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CVS42_RS02460 b5a09151501d3da887f294b023b25f05 171 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 12 160 3.1E-38 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CVS42_RS02460 b5a09151501d3da887f294b023b25f05 171 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 5 163 3.0E-44 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CVS42_RS08500 10d1ebf1af064ae73c90131523c857b2 460 Pfam PF00939 Sodium:sulfate symporter transmembrane region 41 456 6.4E-50 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CVS42_RS08500 10d1ebf1af064ae73c90131523c857b2 460 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 453 2.8E-110 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CVS42_RS08500 10d1ebf1af064ae73c90131523c857b2 460 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 407 423 - T 29-03-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 CVS42_RS15405 598ca05efccf384f0dbf6c2a1c1751f8 512 Gene3D G3DSA:3.30.450.20 221 338 5.3E-9 T 29-03-2018 CVS42_RS15405 598ca05efccf384f0dbf6c2a1c1751f8 512 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 348 505 4.4E-36 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS15405 598ca05efccf384f0dbf6c2a1c1751f8 512 SMART SM00267 340 507 1.5E-39 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS15405 598ca05efccf384f0dbf6c2a1c1751f8 512 SUPERFAMILY SSF103190 183 246 6.54E-6 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CVS42_RS15405 598ca05efccf384f0dbf6c2a1c1751f8 512 SUPERFAMILY SSF55073 356 506 4.08E-36 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS15405 598ca05efccf384f0dbf6c2a1c1751f8 512 Pfam PF00990 Diguanylate cyclase, GGDEF domain 352 503 1.6E-32 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS15405 598ca05efccf384f0dbf6c2a1c1751f8 512 Gene3D G3DSA:3.30.450.20 135 220 1.4E-9 T 29-03-2018 CVS42_RS15405 598ca05efccf384f0dbf6c2a1c1751f8 512 Gene3D G3DSA:3.30.70.270 339 508 2.0E-41 T 29-03-2018 CVS42_RS05505 e5f0a9c7456fc37b0def4b157b326a10 126 Pfam PF04347 Flagellar biosynthesis protein, FliO 46 120 7.1E-19 T 29-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CVS42_RS05505 e5f0a9c7456fc37b0def4b157b326a10 126 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 34 100 6.0E-21 T 29-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CVS42_RS02705 334bc02b378345279e0b205f9da6f65a 249 Gene3D G3DSA:1.10.12.10 213 247 8.2E-11 T 29-03-2018 IPR014748 Crontonase, C-terminal CVS42_RS02705 334bc02b378345279e0b205f9da6f65a 249 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 239 5.3E-49 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CVS42_RS02705 334bc02b378345279e0b205f9da6f65a 249 SUPERFAMILY SSF52096 4 248 8.15E-70 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CVS42_RS02705 334bc02b378345279e0b205f9da6f65a 249 Gene3D G3DSA:3.90.226.10 5 212 1.5E-57 T 29-03-2018 CVS42_RS21525 f31ab1c3cb4f1feeb1026bde23002d89 289 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 66 88 - T 29-03-2018 IPR030470 UbiA prenyltransferase conserved site CVS42_RS21525 f31ab1c3cb4f1feeb1026bde23002d89 289 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 4 287 30.093 T 29-03-2018 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CVS42_RS21525 f31ab1c3cb4f1feeb1026bde23002d89 289 Pfam PF01040 UbiA prenyltransferase family 27 269 1.3E-63 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CVS42_RS21525 f31ab1c3cb4f1feeb1026bde23002d89 289 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 11 287 3.0E-106 T 29-03-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CVS42_RS14075 0dc5459788488e50295043b6acfe9d1a 472 Pfam PF00202 Aminotransferase class-III 73 467 1.8E-128 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS14075 0dc5459788488e50295043b6acfe9d1a 472 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 288 325 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS14075 0dc5459788488e50295043b6acfe9d1a 472 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 47 470 50.61 T 29-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CVS42_RS14075 0dc5459788488e50295043b6acfe9d1a 472 PIRSF PIRSF000521 67 469 1.4E-27 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS14075 0dc5459788488e50295043b6acfe9d1a 472 Gene3D G3DSA:3.90.1150.10 38 257 3.2E-47 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS14075 0dc5459788488e50295043b6acfe9d1a 472 Gene3D G3DSA:3.90.1150.10 299 469 2.4E-44 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS14075 0dc5459788488e50295043b6acfe9d1a 472 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 59 467 1.7E-181 T 29-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CVS42_RS14075 0dc5459788488e50295043b6acfe9d1a 472 SUPERFAMILY SSF53383 51 469 1.61E-130 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS05575 45c33abb930fad2d7b7f82ae2e3f4141 306 Pfam PF00691 OmpA family 151 249 3.8E-18 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS05575 45c33abb930fad2d7b7f82ae2e3f4141 306 SUPERFAMILY SSF103088 140 255 1.83E-28 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS05575 45c33abb930fad2d7b7f82ae2e3f4141 306 Gene3D G3DSA:3.30.1330.60 108 259 4.0E-30 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS05575 45c33abb930fad2d7b7f82ae2e3f4141 306 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 8 58 9.5E-17 T 29-03-2018 IPR025713 Motility protein B, N-terminal domain CVS42_RS13955 f542f1aad8a99b36f63fb117b0146a5d 411 SUPERFAMILY SSF109604 157 326 1.07E-32 T 29-03-2018 CVS42_RS13955 f542f1aad8a99b36f63fb117b0146a5d 411 Pfam PF13487 HD domain 215 278 1.2E-17 T 29-03-2018 CVS42_RS13955 f542f1aad8a99b36f63fb117b0146a5d 411 TIGRFAM TIGR00277 HDIG: HDIG domain 164 255 1.0E-8 T 29-03-2018 IPR006675 HDIG domain CVS42_RS13955 f542f1aad8a99b36f63fb117b0146a5d 411 Pfam PF11871 Domain of unknown function (DUF3391) 5 126 1.0E-16 T 29-03-2018 IPR021812 Protein of unknown function DUF3391 CVS42_RS13955 f542f1aad8a99b36f63fb117b0146a5d 411 Gene3D G3DSA:1.10.3210.10 67 328 1.7E-37 T 29-03-2018 CVS42_RS13955 f542f1aad8a99b36f63fb117b0146a5d 411 SMART SM00471 160 296 1.0E-6 T 29-03-2018 IPR003607 HD/PDEase domain CVS42_RS00465 eeaabcfb59dddd243eb3a91c8bb673b2 408 Pfam PF04932 O-Antigen ligase 184 338 2.3E-18 T 29-03-2018 IPR007016 O-antigen ligase-related CVS42_RS14425 ee9bba7a4936ad54ec351d0973b2b6fd 575 SUPERFAMILY SSF116726 293 356 2.88E-12 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS14425 ee9bba7a4936ad54ec351d0973b2b6fd 575 Pfam PF02080 TrkA-C domain 209 276 8.0E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS14425 ee9bba7a4936ad54ec351d0973b2b6fd 575 Gene3D G3DSA:3.30.70.1450 290 365 1.2E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS14425 ee9bba7a4936ad54ec351d0973b2b6fd 575 Gene3D G3DSA:3.30.70.1450 206 287 3.4E-13 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS14425 ee9bba7a4936ad54ec351d0973b2b6fd 575 SUPERFAMILY SSF116726 207 282 9.94E-14 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CVS42_RS14425 ee9bba7a4936ad54ec351d0973b2b6fd 575 Pfam PF03600 Citrate transporter 33 520 1.0E-23 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 448 6.8E-33 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 Gene3D G3DSA:3.30.390.30 323 449 5.8E-36 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 SUPERFAMILY SSF55424 335 449 1.89E-33 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 5.7E-66 T 29-03-2018 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 5.7E-66 T 29-03-2018 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 5.7E-66 T 29-03-2018 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.7E-66 T 29-03-2018 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 5.7E-66 T 29-03-2018 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 5.7E-66 T 29-03-2018 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.7E-66 T 29-03-2018 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 5.7E-66 T 29-03-2018 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 5.7E-66 T 29-03-2018 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 449 7.5E-216 T 29-03-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 Gene3D G3DSA:3.50.50.60 1 163 1.4E-28 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 SUPERFAMILY SSF51905 1 358 6.48E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 9.2E-28 T 29-03-2018 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 9.2E-28 T 29-03-2018 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 9.2E-28 T 29-03-2018 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 9.2E-28 T 29-03-2018 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 9.2E-28 T 29-03-2018 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 PIRSF PIRSF000350 1 445 1.3E-84 T 29-03-2018 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 Gene3D G3DSA:3.40.50.720 164 322 2.2E-35 T 29-03-2018 CVS42_RS00150 592722fdcb9cfbf1a4edf7ce2ed274f4 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 317 1.1E-67 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS15565 861b87a4693a515c02fbe4fd23903607 505 Gene3D G3DSA:3.40.309.10 280 479 9.6E-66 T 29-03-2018 CVS42_RS15565 861b87a4693a515c02fbe4fd23903607 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CVS42_RS15565 861b87a4693a515c02fbe4fd23903607 505 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CVS42_RS15565 861b87a4693a515c02fbe4fd23903607 505 Gene3D G3DSA:3.40.605.10 15 279 7.3E-89 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS15565 861b87a4693a515c02fbe4fd23903607 505 Pfam PF00171 Aldehyde dehydrogenase family 27 492 7.7E-161 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS15565 861b87a4693a515c02fbe4fd23903607 505 SUPERFAMILY SSF53720 13 495 1.15E-158 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CVS42_RS20530 41602fa56032420bc959b65215d9a973 208 Pfam PF07947 YhhN family 26 206 9.2E-52 T 29-03-2018 IPR012506 YhhN-like GO:0016021 CVS42_RS16330 a95bb7fe5ec132688a27813930225ee3 260 Pfam PF07103 Protein of unknown function (DUF1365) 23 258 1.0E-71 T 29-03-2018 IPR010775 Protein of unknown function DUF1365 CVS42_RS13225 72da521a3b8bc802cbb564425bfa52ac 306 Pfam PF05661 Protein of unknown function (DUF808) 4 294 9.6E-116 T 29-03-2018 IPR008526 Inner membrane protein YedI CVS42_RS13225 72da521a3b8bc802cbb564425bfa52ac 306 PIRSF PIRSF016660 1 305 1.9E-121 T 29-03-2018 IPR008526 Inner membrane protein YedI CVS42_RS12515 1eba266808880ab9ee62c3ba8f446e05 300 SUPERFAMILY SSF53850 90 298 5.79E-41 T 29-03-2018 CVS42_RS12515 1eba266808880ab9ee62c3ba8f446e05 300 Gene3D G3DSA:3.40.190.10 176 264 6.8E-23 T 29-03-2018 CVS42_RS12515 1eba266808880ab9ee62c3ba8f446e05 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 7.6E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS12515 1eba266808880ab9ee62c3ba8f446e05 300 SUPERFAMILY SSF46785 6 113 2.16E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS12515 1eba266808880ab9ee62c3ba8f446e05 300 Gene3D G3DSA:3.40.190.10 90 175 6.2E-15 T 29-03-2018 CVS42_RS12515 1eba266808880ab9ee62c3ba8f446e05 300 Gene3D G3DSA:1.10.10.10 2 85 2.4E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS12515 1eba266808880ab9ee62c3ba8f446e05 300 Pfam PF03466 LysR substrate binding domain 89 295 1.9E-41 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS18245 d3c702556c482970f85f1dc3053c928e 426 SMART SM01091 339 417 1.7E-23 T 29-03-2018 IPR005170 Transporter-associated domain CVS42_RS18245 d3c702556c482970f85f1dc3053c928e 426 SUPERFAMILY SSF56176 337 423 3.54E-21 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CVS42_RS18245 d3c702556c482970f85f1dc3053c928e 426 Pfam PF00571 CBS domain 275 323 2.1E-4 T 29-03-2018 IPR000644 CBS domain CVS42_RS18245 d3c702556c482970f85f1dc3053c928e 426 SUPERFAMILY SSF54631 189 326 5.05E-26 T 29-03-2018 CVS42_RS18245 d3c702556c482970f85f1dc3053c928e 426 Pfam PF03471 Transporter associated domain 341 414 4.9E-15 T 29-03-2018 IPR005170 Transporter-associated domain CVS42_RS18245 d3c702556c482970f85f1dc3053c928e 426 Pfam PF01595 Domain of unknown function DUF21 11 179 5.9E-50 T 29-03-2018 IPR002550 Domain of unknown function DUF21 CVS42_RS18245 d3c702556c482970f85f1dc3053c928e 426 Gene3D G3DSA:3.10.580.10 183 335 4.8E-22 T 29-03-2018 CVS42_RS18245 d3c702556c482970f85f1dc3053c928e 426 Gene3D G3DSA:3.30.465.10 336 426 4.7E-15 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CVS42_RS08655 8fa2c3fca7dbacc67be8534e15e0e947 479 Gene3D G3DSA:3.90.1150.10 350 479 8.3E-32 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS08655 8fa2c3fca7dbacc67be8534e15e0e947 479 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 281 318 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS08655 8fa2c3fca7dbacc67be8534e15e0e947 479 SUPERFAMILY SSF53383 72 467 4.08E-106 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS08655 8fa2c3fca7dbacc67be8534e15e0e947 479 Gene3D G3DSA:3.40.640.10 105 349 2.4E-62 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS08655 8fa2c3fca7dbacc67be8534e15e0e947 479 Pfam PF00202 Aminotransferase class-III 73 465 1.9E-79 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS08655 8fa2c3fca7dbacc67be8534e15e0e947 479 PIRSF PIRSF000521 222 468 7.4E-19 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS08655 8fa2c3fca7dbacc67be8534e15e0e947 479 PIRSF PIRSF000521 55 175 2.6E-5 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS08655 8fa2c3fca7dbacc67be8534e15e0e947 479 PIRSF PIRSF000521 168 200 49.0 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS06690 095d2d05f7c24ba3595ec4630b42118b 318 Pfam PF03734 L,D-transpeptidase catalytic domain 105 241 1.7E-19 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CVS42_RS06690 095d2d05f7c24ba3595ec4630b42118b 318 Gene3D G3DSA:3.10.350.10 46 94 1.5E-4 T 29-03-2018 CVS42_RS06690 095d2d05f7c24ba3595ec4630b42118b 318 SUPERFAMILY SSF141523 102 241 2.09E-29 T 29-03-2018 CVS42_RS06690 095d2d05f7c24ba3595ec4630b42118b 318 Gene3D G3DSA:2.40.440.10 100 243 9.4E-29 T 29-03-2018 CVS42_RS18705 ac9d8dc299b761ed0a78a5b5c116d1d1 156 Gene3D G3DSA:2.40.70.10 36 143 4.2E-16 T 29-03-2018 IPR021109 Aspartic peptidase domain CVS42_RS18705 ac9d8dc299b761ed0a78a5b5c116d1d1 156 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 61 72 - T 29-03-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 CVS42_RS18705 ac9d8dc299b761ed0a78a5b5c116d1d1 156 Pfam PF13975 gag-polyprotein putative aspartyl protease 51 139 1.8E-20 T 29-03-2018 CVS42_RS18705 ac9d8dc299b761ed0a78a5b5c116d1d1 156 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 39 152 2.0E-23 T 29-03-2018 IPR011969 Clan AA aspartic peptidase, C-terminal CVS42_RS18705 ac9d8dc299b761ed0a78a5b5c116d1d1 156 SUPERFAMILY SSF50630 41 142 7.29E-17 T 29-03-2018 IPR021109 Aspartic peptidase domain CVS42_RS01285 c49cbb2560ec966d2460702b06a68855 1117 PIRSF PIRSF000980 1 1117 0.0 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CVS42_RS01285 c49cbb2560ec966d2460702b06a68855 1117 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1116 20.823 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CVS42_RS01285 c49cbb2560ec966d2460702b06a68855 1117 Gene3D G3DSA:1.10.486.10 435 642 1.4E-64 T 29-03-2018 CVS42_RS01285 c49cbb2560ec966d2460702b06a68855 1117 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1079 0.0 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CVS42_RS01285 c49cbb2560ec966d2460702b06a68855 1117 SUPERFAMILY SSF52540 359 807 1.24E-97 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS01285 c49cbb2560ec966d2460702b06a68855 1117 Gene3D G3DSA:1.10.10.160 86 196 7.4E-30 T 29-03-2018 CVS42_RS01285 c49cbb2560ec966d2460702b06a68855 1117 SUPERFAMILY SSF52540 1 345 2.92E-110 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS01285 c49cbb2560ec966d2460702b06a68855 1117 SUPERFAMILY SSF52980 820 1113 3.22E-76 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CVS42_RS01285 c49cbb2560ec966d2460702b06a68855 1117 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 801 3.6E-284 T 29-03-2018 CVS42_RS01340 5ba977ccf8b36e6dc8fb1f575163e434 299 Gene3D G3DSA:1.10.3720.10 26 293 9.7E-36 T 29-03-2018 CVS42_RS01340 5ba977ccf8b36e6dc8fb1f575163e434 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 280 3.4E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS01340 5ba977ccf8b36e6dc8fb1f575163e434 299 SUPERFAMILY SSF161098 21 291 2.9E-45 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS09045 34da3f45335219f410f753fb2cbc46e7 68 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 1.7E-32 T 29-03-2018 IPR009624 Uncharacterised protein family UPF0253 CVS42_RS09045 34da3f45335219f410f753fb2cbc46e7 68 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 68 28.583 T 29-03-2018 IPR009624 Uncharacterised protein family UPF0253 CVS42_RS09045 34da3f45335219f410f753fb2cbc46e7 68 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 5.0E-13 T 29-03-2018 IPR009624 Uncharacterised protein family UPF0253 CVS42_RS10630 5846ea1aa8748e103361ca9a489b48f3 372 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 9 369 2.9E-150 T 29-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CVS42_RS10630 5846ea1aa8748e103361ca9a489b48f3 372 Pfam PF01924 Hydrogenase formation hypA family 16 366 2.7E-150 T 29-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CVS42_RS10630 5846ea1aa8748e103361ca9a489b48f3 372 PIRSF PIRSF005622 5 372 1.6E-156 T 29-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CVS42_RS10630 5846ea1aa8748e103361ca9a489b48f3 372 Gene3D G3DSA:3.40.30.10 57 283 0.0017 T 29-03-2018 CVS42_RS20215 2665fc26bd0ef02ee423a60c1ccd8657 110 Gene3D G3DSA:3.30.70.100 1 102 7.1E-31 T 29-03-2018 CVS42_RS20215 2665fc26bd0ef02ee423a60c1ccd8657 110 Pfam PF07876 Stress responsive A/B Barrel Domain 2 97 3.9E-27 T 29-03-2018 IPR013097 Stress responsive alpha-beta barrel CVS42_RS20215 2665fc26bd0ef02ee423a60c1ccd8657 110 SMART SM00886 2 98 4.0E-33 T 29-03-2018 IPR013097 Stress responsive alpha-beta barrel CVS42_RS20215 2665fc26bd0ef02ee423a60c1ccd8657 110 SUPERFAMILY SSF54909 2 99 3.71E-28 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CVS42_RS14500 641206ce5cc2a6d84f91c9c68fba8fe4 234 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 2.6E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS14500 641206ce5cc2a6d84f91c9c68fba8fe4 234 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 1.3E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS14500 641206ce5cc2a6d84f91c9c68fba8fe4 234 Gene3D G3DSA:3.30.700.10 9 158 6.7E-4 T 29-03-2018 CVS42_RS08495 31f1a8d5e6342457fc5f79f889d5d33c 824 Pfam PF00343 Carbohydrate phosphorylase 104 817 0.0 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CVS42_RS08495 31f1a8d5e6342457fc5f79f889d5d33c 824 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 662 674 - T 29-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CVS42_RS08495 31f1a8d5e6342457fc5f79f889d5d33c 824 Gene3D G3DSA:3.40.50.2000 490 803 2.3E-125 T 29-03-2018 CVS42_RS08495 31f1a8d5e6342457fc5f79f889d5d33c 824 PIRSF PIRSF000460 1 824 1.7E-221 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CVS42_RS08495 31f1a8d5e6342457fc5f79f889d5d33c 824 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 818 0.0 T 29-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CVS42_RS08495 31f1a8d5e6342457fc5f79f889d5d33c 824 Gene3D G3DSA:3.40.50.2000 5 489 2.0E-193 T 29-03-2018 CVS42_RS08495 31f1a8d5e6342457fc5f79f889d5d33c 824 SUPERFAMILY SSF53756 11 822 0.0 T 29-03-2018 CVS42_RS03200 42512bb28b9bd113643397ef3052fb20 135 SUPERFAMILY SSF69635 2 122 2.12E-11 T 29-03-2018 CVS42_RS03200 42512bb28b9bd113643397ef3052fb20 135 Gene3D G3DSA:3.30.1460.10 1 114 9.6E-14 T 29-03-2018 CVS42_RS17460 91d09842a603b7b51db7241917adb089 398 Gene3D G3DSA:3.40.1710.10 43 199 1.7E-24 T 29-03-2018 CVS42_RS17460 91d09842a603b7b51db7241917adb089 398 Pfam PF12698 ABC-2 family transporter protein 23 373 2.8E-41 T 29-03-2018 CVS42_RS15815 167e14564d764e9722a77b247584c293 239 SUPERFAMILY SSF53850 25 231 8.95E-25 T 29-03-2018 CVS42_RS15815 167e14564d764e9722a77b247584c293 239 Gene3D G3DSA:3.40.190.10 88 198 2.4E-15 T 29-03-2018 CVS42_RS15815 167e14564d764e9722a77b247584c293 239 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 94 230 3.7E-15 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS15815 167e14564d764e9722a77b247584c293 239 Gene3D G3DSA:3.40.190.10 18 78 0.028 T 29-03-2018 CVS42_RS12085 f49a3a9b39508dc6eaad5cb0e1d9ed94 479 Pfam PF07603 Protein of unknown function (DUF1566) 283 431 1.5E-14 T 29-03-2018 IPR011460 Protein of unknown function DUF1566 CVS42_RS03675 2f1bd9e2a15dc0455294280bed39d38b 309 Gene3D G3DSA:3.30.420.40 121 309 2.9E-55 T 29-03-2018 CVS42_RS03675 2f1bd9e2a15dc0455294280bed39d38b 309 ProSitePatterns PS01125 ROK family signature. 140 167 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CVS42_RS03675 2f1bd9e2a15dc0455294280bed39d38b 309 SUPERFAMILY SSF53067 9 304 1.19E-63 T 29-03-2018 CVS42_RS03675 2f1bd9e2a15dc0455294280bed39d38b 309 Pfam PF00480 ROK family 9 300 1.2E-73 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CVS42_RS03675 2f1bd9e2a15dc0455294280bed39d38b 309 Gene3D G3DSA:3.30.420.40 3 120 3.5E-24 T 29-03-2018 CVS42_RS02375 40cce460e8e512ceb4189345d5a112bf 532 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 54 503 6.6E-152 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CVS42_RS02375 40cce460e8e512ceb4189345d5a112bf 532 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 17 503 1.4E-192 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CVS42_RS19765 a34261e3ea1229fb5dab8693d2891be8 287 Pfam PF01734 Patatin-like phospholipase 9 60 3.5E-6 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CVS42_RS19765 a34261e3ea1229fb5dab8693d2891be8 287 Gene3D G3DSA:3.40.1090.10 3 208 9.0E-24 T 29-03-2018 CVS42_RS19765 a34261e3ea1229fb5dab8693d2891be8 287 SUPERFAMILY SSF52151 4 226 5.75E-36 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CVS42_RS06425 6215a13649d9ec231ed044439e411190 157 Gene3D G3DSA:3.90.1170.40 6 156 5.0E-58 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CVS42_RS06425 6215a13649d9ec231ed044439e411190 157 SUPERFAMILY SSF54690 9 155 4.05E-53 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CVS42_RS06425 6215a13649d9ec231ed044439e411190 157 Pfam PF02391 MoaE protein 13 125 4.8E-38 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CVS42_RS12135 d36594ca6aa4776b4ac264a9f430dbc7 183 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 157 5.8E-30 T 29-03-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS00320 b261135da128b854a10b8e5632c2f9c8 395 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 391 50.139 T 29-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CVS42_RS00320 b261135da128b854a10b8e5632c2f9c8 395 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 78 8.8E-34 T 29-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CVS42_RS00320 b261135da128b854a10b8e5632c2f9c8 395 Pfam PF07055 Enoyl reductase FAD binding domain 323 385 1.6E-24 T 29-03-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CVS42_RS00320 b261135da128b854a10b8e5632c2f9c8 395 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 83 315 1.3E-101 T 29-03-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CVS42_RS00320 b261135da128b854a10b8e5632c2f9c8 395 SUPERFAMILY SSF51735 41 77 6.6E-5 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS00320 b261135da128b854a10b8e5632c2f9c8 395 SUPERFAMILY SSF51735 107 146 6.6E-5 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS00320 b261135da128b854a10b8e5632c2f9c8 395 Gene3D G3DSA:3.40.50.720 6 195 6.2E-7 T 29-03-2018 CVS42_RS16250 4afb4928633bbb4d975b47795e0e6697 194 Pfam PF03923 Uncharacterized lipoprotein 28 186 1.7E-38 T 29-03-2018 IPR005619 Uncharacterised protein family, YajG CVS42_RS15855 b401cc7b5cf7a36119aea9df9d8e511a 437 Pfam PF04225 Opacity-associated protein A LysM-like domain 77 136 2.4E-6 T 29-03-2018 IPR007340 Opacity-associated protein A CVS42_RS15855 b401cc7b5cf7a36119aea9df9d8e511a 437 Gene3D G3DSA:3.10.350.10 75 129 0.0012 T 29-03-2018 CVS42_RS15855 b401cc7b5cf7a36119aea9df9d8e511a 437 Pfam PF01551 Peptidase family M23 296 389 6.0E-31 T 29-03-2018 IPR016047 Peptidase M23 CVS42_RS15855 b401cc7b5cf7a36119aea9df9d8e511a 437 SUPERFAMILY SSF51261 149 391 5.23E-70 T 29-03-2018 IPR011055 Duplicated hybrid motif CVS42_RS15855 b401cc7b5cf7a36119aea9df9d8e511a 437 Pfam PF08525 Opacity-associated protein A N-terminal motif 7 33 7.5E-7 T 29-03-2018 IPR013731 Opacity-associated protein A, N-terminal CVS42_RS15855 b401cc7b5cf7a36119aea9df9d8e511a 437 Gene3D G3DSA:2.70.70.10 263 436 9.1E-41 T 29-03-2018 CVS42_RS15810 8406c44c9c379d24e90502dda875bba7 340 SUPERFAMILY SSF56281 46 320 2.03E-49 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS15810 8406c44c9c379d24e90502dda875bba7 340 Pfam PF12706 Beta-lactamase superfamily domain 93 286 6.7E-20 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS15810 8406c44c9c379d24e90502dda875bba7 340 SMART SM00849 62 262 3.1E-9 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS15810 8406c44c9c379d24e90502dda875bba7 340 Gene3D G3DSA:3.60.15.10 45 331 2.8E-48 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 Gene3D G3DSA:3.30.70.1430 40 140 4.2E-24 T 29-03-2018 CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 SUPERFAMILY SSF82866 288 490 7.72E-37 T 29-03-2018 CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.2E-42 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 5.2E-42 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 5.2E-42 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 5.2E-42 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.2E-42 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 5.2E-42 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 5.2E-42 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 Pfam PF00873 AcrB/AcrD/AcrF family 4 1005 1.6E-186 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 SUPERFAMILY SSF82693 40 133 1.31E-20 T 29-03-2018 CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 SUPERFAMILY SSF82866 780 1006 3.53E-41 T 29-03-2018 CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 SUPERFAMILY SSF82714 183 262 3.27E-7 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 Gene3D G3DSA:1.20.1640.10 265 493 1.0E-39 T 29-03-2018 CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 Gene3D G3DSA:1.20.1640.10 806 1009 1.3E-39 T 29-03-2018 CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 SUPERFAMILY SSF82714 697 781 6.02E-6 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 Gene3D G3DSA:3.30.2090.10 181 264 2.2E-7 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS05950 348e43b96c9c6100cbfb5621e15b7d91 1020 Gene3D G3DSA:3.30.2090.10 696 782 1.1E-10 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CVS42_RS13130 55f9fb71aadcaf94acf5b04e9bc37422 146 Pfam PF03646 FlaG protein 37 144 1.6E-23 T 29-03-2018 IPR005186 FlaG protein CVS42_RS13130 55f9fb71aadcaf94acf5b04e9bc37422 146 Gene3D G3DSA:3.30.160.170 16 131 9.5E-19 T 29-03-2018 IPR005186 FlaG protein CVS42_RS13130 55f9fb71aadcaf94acf5b04e9bc37422 146 SUPERFAMILY SSF160214 41 145 1.7E-20 T 29-03-2018 IPR005186 FlaG protein CVS42_RS15960 5c0aa7f87afbdd91a94b9e6c926549f4 331 Pfam PF01882 Protein of unknown function DUF58 217 290 5.9E-8 T 29-03-2018 IPR002881 Domain of unknown function DUF58 CVS42_RS15665 1dee49c3ecfe4348dfc3236abd8de04b 1124 SUPERFAMILY SSF52540 1 213 3.82E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS15665 1dee49c3ecfe4348dfc3236abd8de04b 1124 SUPERFAMILY SSF52540 1000 1116 3.82E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS15665 1dee49c3ecfe4348dfc3236abd8de04b 1124 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1107 1.1E-66 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CVS42_RS15665 1dee49c3ecfe4348dfc3236abd8de04b 1124 Gene3D G3DSA:3.40.50.300 1 183 4.0E-32 T 29-03-2018 CVS42_RS15665 1dee49c3ecfe4348dfc3236abd8de04b 1124 PIRSF PIRSF005719 1 544 4.0E-114 T 29-03-2018 IPR024704 Structural maintenance of chromosomes protein CVS42_RS15665 1dee49c3ecfe4348dfc3236abd8de04b 1124 PIRSF PIRSF005719 563 1123 2.5E-120 T 29-03-2018 IPR024704 Structural maintenance of chromosomes protein CVS42_RS15665 1dee49c3ecfe4348dfc3236abd8de04b 1124 Gene3D G3DSA:3.40.50.300 740 1119 1.1E-25 T 29-03-2018 CVS42_RS15665 1dee49c3ecfe4348dfc3236abd8de04b 1124 Gene3D G3DSA:1.20.120.330 429 689 1.9E-6 T 29-03-2018 CVS42_RS15665 1dee49c3ecfe4348dfc3236abd8de04b 1124 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1116 21.728 T 29-03-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CVS42_RS11505 3032a5b7126c055c010c4928a64fb1d3 90 Gene3D G3DSA:3.10.450.10 6 88 1.6E-4 T 29-03-2018 CVS42_RS11505 3032a5b7126c055c010c4928a64fb1d3 90 SUPERFAMILY SSF54403 7 85 5.95E-10 T 29-03-2018 CVS42_RS20485 1024f1044367661e4b44efb4abe6f01f 53 Pfam PF02416 mttA/Hcf106 family 8 50 1.1E-14 T 29-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CVS42_RS20485 1024f1044367661e4b44efb4abe6f01f 53 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 50 1.1E-19 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CVS42_RS20485 1024f1044367661e4b44efb4abe6f01f 53 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 3 53 17.78 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CVS42_RS06960 ec48b7e2e4f919227bca3c6f016f8d8c 641 Pfam PF13450 NAD(P)-binding Rossmann-like domain 85 141 4.8E-13 T 29-03-2018 CVS42_RS06960 ec48b7e2e4f919227bca3c6f016f8d8c 641 Gene3D G3DSA:3.50.50.60 77 641 9.1E-17 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS06960 ec48b7e2e4f919227bca3c6f016f8d8c 641 SUPERFAMILY SSF51905 569 638 2.12E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS06960 ec48b7e2e4f919227bca3c6f016f8d8c 641 SUPERFAMILY SSF51905 80 241 2.12E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS06960 ec48b7e2e4f919227bca3c6f016f8d8c 641 SUPERFAMILY SSF51905 374 443 2.12E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS14340 2b4cc4c162215c113ec34dea25855116 554 SUPERFAMILY SSF52540 284 507 7.32E-28 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS14340 2b4cc4c162215c113ec34dea25855116 554 SUPERFAMILY SSF52540 3 50 7.32E-28 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS14340 2b4cc4c162215c113ec34dea25855116 554 Gene3D G3DSA:3.40.50.300 1 206 2.5E-25 T 29-03-2018 CVS42_RS14340 2b4cc4c162215c113ec34dea25855116 554 PIRSF PIRSF003128 1 554 3.4E-160 T 29-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CVS42_RS14340 2b4cc4c162215c113ec34dea25855116 554 Gene3D G3DSA:3.40.50.300 254 533 9.7E-22 T 29-03-2018 CVS42_RS14340 2b4cc4c162215c113ec34dea25855116 554 SUPERFAMILY SSF52540 1 217 1.9E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS14340 2b4cc4c162215c113ec34dea25855116 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 513 3.2E-18 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CVS42_RS14340 2b4cc4c162215c113ec34dea25855116 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 553 2.4E-175 T 29-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CVS42_RS00735 9c96fa6febcb0eb1247d76e0bfc40c3e 177 Pfam PF01923 Cobalamin adenosyltransferase 30 160 1.4E-11 T 29-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CVS42_RS00735 9c96fa6febcb0eb1247d76e0bfc40c3e 177 SUPERFAMILY SSF89028 10 173 8.44E-30 T 29-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CVS42_RS00735 9c96fa6febcb0eb1247d76e0bfc40c3e 177 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 30 145 1.0E-16 T 29-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CVS42_RS00735 9c96fa6febcb0eb1247d76e0bfc40c3e 177 Gene3D G3DSA:1.20.1200.10 22 176 9.9E-19 T 29-03-2018 CVS42_RS21275 e754fc82858e9affad6f8299ed6f3b2e 321 Gene3D G3DSA:3.40.1130.10 43 292 2.9E-23 T 29-03-2018 CVS42_RS21275 e754fc82858e9affad6f8299ed6f3b2e 321 SMART SM00563 89 231 4.4E-21 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CVS42_RS21275 e754fc82858e9affad6f8299ed6f3b2e 321 Pfam PF01553 Acyltransferase 76 214 6.4E-14 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CVS42_RS21275 e754fc82858e9affad6f8299ed6f3b2e 321 SUPERFAMILY SSF69593 26 288 3.66E-30 T 29-03-2018 CVS42_RS14150 65340ea33f6c8084f7c6b9ec965ba2cb 367 SUPERFAMILY SSF51445 16 320 2.11E-86 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CVS42_RS14150 65340ea33f6c8084f7c6b9ec965ba2cb 367 Pfam PF07555 beta-N-acetylglucosaminidase 18 307 1.2E-55 T 29-03-2018 IPR011496 Beta-N-acetylglucosaminidase MetaCyc: PWY-7437 CVS42_RS14150 65340ea33f6c8084f7c6b9ec965ba2cb 367 Gene3D G3DSA:3.20.20.80 14 320 5.5E-79 T 29-03-2018 CVS42_RS18960 6441cbbae519c7582053f937ffea6213 141 Pfam PF00460 Flagella basal body rod protein 9 32 7.8E-7 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CVS42_RS18960 6441cbbae519c7582053f937ffea6213 141 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 137 3.4E-12 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CVS42_RS18960 6441cbbae519c7582053f937ffea6213 141 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 6 139 9.3E-39 T 29-03-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 CVS42_RS21090 81ef1c67858e76c20546757299c49552 480 PIRSF PIRSF006247 1 480 2.8E-166 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CVS42_RS21090 81ef1c67858e76c20546757299c49552 480 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 463 3.7E-110 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CVS42_RS21090 81ef1c67858e76c20546757299c49552 480 Pfam PF02386 Cation transport protein 61 474 6.3E-56 T 29-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CVS42_RS13100 33128fdcd84222d25c37a557f3365176 77 SUPERFAMILY SSF47336 13 72 3.2E-6 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CVS42_RS13100 33128fdcd84222d25c37a557f3365176 77 Gene3D G3DSA:1.10.1200.10 6 74 3.0E-4 T 29-03-2018 CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 Gene3D G3DSA:3.40.50.880 152 378 8.6E-66 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 297 7.6E-41 T 29-03-2018 CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 7.6E-41 T 29-03-2018 CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 305 316 7.6E-41 T 29-03-2018 CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 263 279 7.6E-41 T 29-03-2018 CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 7.6E-41 T 29-03-2018 CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 374 3.2E-150 T 29-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 PRINTS PR00097 Anthranilate synthase component II signature 235 244 1.1E-5 T 29-03-2018 CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 PRINTS PR00097 Anthranilate synthase component II signature 348 361 1.1E-5 T 29-03-2018 CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 PRINTS PR00097 Anthranilate synthase component II signature 263 274 1.1E-5 T 29-03-2018 CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 377 48.724 T 29-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 Pfam PF00117 Glutamine amidotransferase class-I 196 371 1.5E-48 T 29-03-2018 IPR017926 Glutamine amidotransferase CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 SUPERFAMILY SSF52317 153 377 9.76E-62 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 3.2E-53 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 263 274 3.1E-11 T 29-03-2018 CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 348 361 3.1E-11 T 29-03-2018 CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 3.1E-11 T 29-03-2018 CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 Gene3D G3DSA:3.50.30.20 2 151 1.2E-64 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 SUPERFAMILY SSF52021 4 142 5.75E-58 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS12735 6ff201938702bee5d462c33081858bba 378 SMART SM01097 3 133 8.0E-93 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CVS42_RS06620 660af96914ca9f344b2c128f555ea6b6 146 Gene3D G3DSA:3.40.630.30 2 114 1.1E-12 T 29-03-2018 CVS42_RS06620 660af96914ca9f344b2c128f555ea6b6 146 SUPERFAMILY SSF55729 1 111 4.03E-14 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS06620 660af96914ca9f344b2c128f555ea6b6 146 Pfam PF13673 Acetyltransferase (GNAT) domain 24 110 1.2E-10 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS05770 96a7567263f29eefcab3c7c633710429 88 PIRSF PIRSF004669 1 88 3.3E-26 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CVS42_RS05770 96a7567263f29eefcab3c7c633710429 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.3E-25 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CVS42_RS05770 96a7567263f29eefcab3c7c633710429 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.3E-25 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CVS42_RS05770 96a7567263f29eefcab3c7c633710429 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.3E-25 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CVS42_RS05770 96a7567263f29eefcab3c7c633710429 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 5.9E-27 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CVS42_RS05770 96a7567263f29eefcab3c7c633710429 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 2.4E-34 T 29-03-2018 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 CVS42_RS14010 26d544f710b15556f06e17a0dc5bde32 165 Gene3D G3DSA:3.10.129.10 23 164 1.2E-34 T 29-03-2018 CVS42_RS14010 26d544f710b15556f06e17a0dc5bde32 165 SUPERFAMILY SSF54637 39 162 6.85E-40 T 29-03-2018 IPR029069 HotDog domain CVS42_RS14010 26d544f710b15556f06e17a0dc5bde32 165 Pfam PF03061 Thioesterase superfamily 58 129 8.1E-19 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CVS42_RS14825 0e108064181f74c44c9fb8d0dd0cd10a 576 Gene3D G3DSA:1.20.1560.10 1 327 6.8E-25 T 29-03-2018 CVS42_RS14825 0e108064181f74c44c9fb8d0dd0cd10a 576 Pfam PF00005 ABC transporter 357 503 2.4E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS14825 0e108064181f74c44c9fb8d0dd0cd10a 576 SUPERFAMILY SSF52540 333 571 1.02E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS14825 0e108064181f74c44c9fb8d0dd0cd10a 576 SUPERFAMILY SSF90123 7 320 3.14E-36 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CVS42_RS14825 0e108064181f74c44c9fb8d0dd0cd10a 576 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 7 534 2.0E-140 T 29-03-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 CVS42_RS14825 0e108064181f74c44c9fb8d0dd0cd10a 576 SMART SM00382 365 552 4.0E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS14825 0e108064181f74c44c9fb8d0dd0cd10a 576 Gene3D G3DSA:3.40.50.300 328 572 3.8E-59 T 29-03-2018 CVS42_RS14825 0e108064181f74c44c9fb8d0dd0cd10a 576 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS15705 e94387ff88e0324bc8942a1f4f21b319 339 Pfam PF00535 Glycosyl transferase family 2 9 173 1.7E-33 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CVS42_RS15705 e94387ff88e0324bc8942a1f4f21b319 339 Gene3D G3DSA:3.90.550.10 3 214 4.0E-34 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS15705 e94387ff88e0324bc8942a1f4f21b319 339 SUPERFAMILY SSF53448 6 260 2.01E-42 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS05380 54f0d6afe0c085aef5efdaa90c68b2f1 113 Pfam PF16998 17 kDa outer membrane surface antigen 23 109 1.9E-10 T 29-03-2018 IPR032635 Surface antigen domain CVS42_RS09410 abc31cdab74968e0b1578b57890f0eff 441 Gene3D G3DSA:3.40.50.1980 26 222 2.0E-83 T 29-03-2018 CVS42_RS09410 abc31cdab74968e0b1578b57890f0eff 441 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 41.089 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CVS42_RS09410 abc31cdab74968e0b1578b57890f0eff 441 PIRSF PIRSF000099 1 427 1.2E-164 T 29-03-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CVS42_RS09410 abc31cdab74968e0b1578b57890f0eff 441 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 6.5E-162 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CVS42_RS09410 abc31cdab74968e0b1578b57890f0eff 441 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 1.2E-98 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CVS42_RS09410 abc31cdab74968e0b1578b57890f0eff 441 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 1.2E-98 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CVS42_RS09410 abc31cdab74968e0b1578b57890f0eff 441 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 1.2E-98 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CVS42_RS09410 abc31cdab74968e0b1578b57890f0eff 441 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 1.2E-98 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CVS42_RS09410 abc31cdab74968e0b1578b57890f0eff 441 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 1.2E-98 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CVS42_RS09410 abc31cdab74968e0b1578b57890f0eff 441 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.2E-98 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CVS42_RS09410 abc31cdab74968e0b1578b57890f0eff 441 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 1.2E-98 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CVS42_RS09410 abc31cdab74968e0b1578b57890f0eff 441 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 1.2E-98 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CVS42_RS09410 abc31cdab74968e0b1578b57890f0eff 441 SUPERFAMILY SSF53720 3 426 3.53E-89 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CVS42_RS09410 abc31cdab74968e0b1578b57890f0eff 441 Pfam PF00815 Histidinol dehydrogenase 25 424 3.2E-168 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CVS42_RS09410 abc31cdab74968e0b1578b57890f0eff 441 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 29-03-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 CVS42_RS09410 abc31cdab74968e0b1578b57890f0eff 441 Gene3D G3DSA:3.40.50.1980 223 368 5.3E-69 T 29-03-2018 CVS42_RS02910 121b600dc5a6da2d05a9e32956f6af3a 279 SUPERFAMILY SSF51197 7 276 2.06E-60 T 29-03-2018 CVS42_RS02910 121b600dc5a6da2d05a9e32956f6af3a 279 Gene3D G3DSA:2.60.120.330 2 279 1.9E-59 T 29-03-2018 IPR027443 Isopenicillin N synthase-like CVS42_RS02910 121b600dc5a6da2d05a9e32956f6af3a 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 3.5E-15 T 29-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CVS42_RS02910 121b600dc5a6da2d05a9e32956f6af3a 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 96 2.5E-10 T 29-03-2018 IPR026992 Non-haem dioxygenase N-terminal domain CVS42_RS20505 94f92cd765a715b1163ad0c879d4534f 427 Pfam PF00375 Sodium:dicarboxylate symporter family 19 403 1.8E-126 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS20505 94f92cd765a715b1163ad0c879d4534f 427 SUPERFAMILY SSF118215 19 404 4.05E-112 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS20505 94f92cd765a715b1163ad0c879d4534f 427 Gene3D G3DSA:1.10.3860.10 8 411 2.3E-128 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS20505 94f92cd765a715b1163ad0c879d4534f 427 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 299 322 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CVS42_RS20505 94f92cd765a715b1163ad0c879d4534f 427 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 7.1E-39 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS20505 94f92cd765a715b1163ad0c879d4534f 427 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 7.1E-39 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS20505 94f92cd765a715b1163ad0c879d4534f 427 PRINTS PR00173 Glutamate-aspartate symporter signature 17 37 7.1E-39 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS20505 94f92cd765a715b1163ad0c879d4534f 427 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 7.1E-39 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS20505 94f92cd765a715b1163ad0c879d4534f 427 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 7.1E-39 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS20505 94f92cd765a715b1163ad0c879d4534f 427 PRINTS PR00173 Glutamate-aspartate symporter signature 84 109 7.1E-39 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS20505 94f92cd765a715b1163ad0c879d4534f 427 PRINTS PR00173 Glutamate-aspartate symporter signature 229 248 7.1E-39 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS17010 a6efb510f67f3dc24ff306c60dbb6d57 191 Gene3D G3DSA:1.10.10.10 172 191 5.0E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS17010 a6efb510f67f3dc24ff306c60dbb6d57 191 SUPERFAMILY SSF51206 25 139 1.44E-16 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CVS42_RS17010 a6efb510f67f3dc24ff306c60dbb6d57 191 Gene3D G3DSA:2.60.120.10 18 119 3.5E-10 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS17010 a6efb510f67f3dc24ff306c60dbb6d57 191 Pfam PF00027 Cyclic nucleotide-binding domain 34 111 7.2E-9 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CVS42_RS17010 a6efb510f67f3dc24ff306c60dbb6d57 191 Gene3D G3DSA:1.10.10.60 126 171 8.1E-4 T 29-03-2018 CVS42_RS03830 15943418925ddc34fb354e323912053a 507 Gene3D G3DSA:3.90.1150.10 367 496 2.0E-19 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS03830 15943418925ddc34fb354e323912053a 507 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 65 412 7.8E-40 T 29-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 CVS42_RS03830 15943418925ddc34fb354e323912053a 507 SUPERFAMILY SSF53383 40 491 4.13E-99 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS03830 15943418925ddc34fb354e323912053a 507 Gene3D G3DSA:3.40.640.10 86 366 1.7E-47 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS21975 dfc7c7c89a5d160bc2623408ebec72b4 83 Pfam PF02416 mttA/Hcf106 family 4 56 1.2E-13 T 29-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CVS42_RS21975 dfc7c7c89a5d160bc2623408ebec72b4 83 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 80 24.627 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CVS42_RS21975 dfc7c7c89a5d160bc2623408ebec72b4 83 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 46 2.3E-20 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CVS42_RS14050 6bb898467f8b7b7a94da82a9c061c055 290 Pfam PF01435 Peptidase family M48 78 289 3.2E-39 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CVS42_RS14050 6bb898467f8b7b7a94da82a9c061c055 290 Hamap MF_00188 Protease HtpX [htpX]. 1 290 25.267 T 29-03-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 CVS42_RS14050 6bb898467f8b7b7a94da82a9c061c055 290 Gene3D G3DSA:3.30.2010.10 68 161 1.5E-20 T 29-03-2018 CVS42_RS20455 41daa265fcf771a9478e7387e2a4c810 734 SUPERFAMILY SSF50993 51 456 2.01E-94 T 29-03-2018 CVS42_RS20455 41daa265fcf771a9478e7387e2a4c810 734 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 55 453 2.7E-103 T 29-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CVS42_RS20455 41daa265fcf771a9478e7387e2a4c810 734 Pfam PF00326 Prolyl oligopeptidase family 516 728 1.0E-71 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CVS42_RS20455 41daa265fcf771a9478e7387e2a4c810 734 Gene3D G3DSA:3.40.50.1820 181 731 3.9E-63 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS20455 41daa265fcf771a9478e7387e2a4c810 734 Gene3D G3DSA:3.40.50.1820 38 178 3.0E-27 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS20455 41daa265fcf771a9478e7387e2a4c810 734 SUPERFAMILY SSF53474 463 712 1.3E-44 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS20455 41daa265fcf771a9478e7387e2a4c810 734 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 526 550 4.7E-55 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CVS42_RS20455 41daa265fcf771a9478e7387e2a4c810 734 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 642 657 4.7E-55 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CVS42_RS20455 41daa265fcf771a9478e7387e2a4c810 734 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 500 518 4.7E-55 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CVS42_RS20455 41daa265fcf771a9478e7387e2a4c810 734 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 660 682 4.7E-55 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CVS42_RS20455 41daa265fcf771a9478e7387e2a4c810 734 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 554 573 4.7E-55 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CVS42_RS20455 41daa265fcf771a9478e7387e2a4c810 734 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 584 604 4.7E-55 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CVS42_RS15135 39eb879e044ac2f909a9f8d362708adf 177 Gene3D G3DSA:3.40.1580.10 29 176 1.8E-11 T 29-03-2018 CVS42_RS15135 39eb879e044ac2f909a9f8d362708adf 177 SUPERFAMILY SSF160631 30 169 1.7E-11 T 29-03-2018 CVS42_RS15135 39eb879e044ac2f909a9f8d362708adf 177 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 31 169 1.9E-10 T 29-03-2018 IPR018958 Knr4/Smi1-like domain CVS42_RS03350 4bca3aa101561f5ac2d59da02b44f32a 284 SUPERFAMILY SSF53335 9 280 7.95E-92 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS03350 4bca3aa101561f5ac2d59da02b44f32a 284 Gene3D G3DSA:3.40.50.150 1 284 2.2E-83 T 29-03-2018 CVS42_RS03350 4bca3aa101561f5ac2d59da02b44f32a 284 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 279 2.8E-83 T 29-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CVS42_RS03350 4bca3aa101561f5ac2d59da02b44f32a 284 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 268 41.298 T 29-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CVS42_RS01130 176d67c8635138934312e5176a96fce4 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 102 1.6E-25 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01130 176d67c8635138934312e5176a96fce4 105 SUPERFAMILY SSF50104 4 102 4.59E-35 T 29-03-2018 IPR008991 Translation protein SH3-like domain CVS42_RS01130 176d67c8635138934312e5176a96fce4 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 4.9E-40 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS01130 176d67c8635138934312e5176a96fce4 105 Gene3D G3DSA:2.30.30.30 2 94 1.6E-32 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CVS42_RS01130 176d67c8635138934312e5176a96fce4 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 29-03-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS01130 176d67c8635138934312e5176a96fce4 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 98 20.354 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS14315 9003534e1a36e9541be69138992dfce8 501 Gene3D G3DSA:1.20.5.340 32 91 4.9E-4 T 29-03-2018 CVS42_RS14315 9003534e1a36e9541be69138992dfce8 501 Pfam PF11471 Maltoporin periplasmic N-terminal extension 5 60 1.2E-12 T 29-03-2018 IPR021570 LamB-type porin N-terminal domain CVS42_RS14315 9003534e1a36e9541be69138992dfce8 501 Pfam PF02264 LamB porin 95 501 1.5E-102 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CVS42_RS14315 9003534e1a36e9541be69138992dfce8 501 SUPERFAMILY SSF56935 92 501 1.59E-121 T 29-03-2018 CVS42_RS14315 9003534e1a36e9541be69138992dfce8 501 Gene3D G3DSA:2.40.170.10 92 501 7.1E-112 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CVS42_RS14315 9003534e1a36e9541be69138992dfce8 501 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 117 497 1.0E-134 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CVS42_RS08990 cce165647824a8d2260bb9dbad76e623 46 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 41 1.3E-26 T 29-03-2018 IPR014175 Conserved hypothetical protein CHP02808 CVS42_RS08990 cce165647824a8d2260bb9dbad76e623 46 Pfam PF09574 Protein of unknown function (Duf2374) 1 41 2.1E-23 T 29-03-2018 IPR014175 Conserved hypothetical protein CHP02808 CVS42_RS09295 a415120121d7acca1d4a90bcb91e93de 282 Gene3D G3DSA:3.40.50.300 30 198 1.9E-5 T 29-03-2018 CVS42_RS09295 a415120121d7acca1d4a90bcb91e93de 282 TIGRFAM TIGR03172 TIGR03172: putative selenium-dependent hydroxylase accessory protein YqeC 31 261 5.2E-84 T 29-03-2018 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC CVS42_RS17265 a37b4d73bebc7a557b14ad409d6c9d95 87 SUPERFAMILY SSF50182 7 69 1.67E-24 T 29-03-2018 IPR010920 LSM domain CVS42_RS17265 a37b4d73bebc7a557b14ad409d6c9d95 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.549 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CVS42_RS17265 a37b4d73bebc7a557b14ad409d6c9d95 87 Gene3D G3DSA:2.30.30.100 4 73 9.1E-34 T 29-03-2018 CVS42_RS17265 a37b4d73bebc7a557b14ad409d6c9d95 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.6E-30 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CVS42_RS17265 a37b4d73bebc7a557b14ad409d6c9d95 87 Pfam PF17209 Hfq protein 7 68 4.8E-31 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CVS42_RS00015 eafd2c9bfd8fe2e94541bc2b477a5da6 548 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 357 537 1.7E-72 T 29-03-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CVS42_RS00015 eafd2c9bfd8fe2e94541bc2b477a5da6 548 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 539 25.517 T 29-03-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 CVS42_RS00015 eafd2c9bfd8fe2e94541bc2b477a5da6 548 PRINTS PR01900 YidC translocation/secretion protein signature 492 516 2.4E-25 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CVS42_RS00015 eafd2c9bfd8fe2e94541bc2b477a5da6 548 PRINTS PR01900 YidC translocation/secretion protein signature 472 487 2.4E-25 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CVS42_RS00015 eafd2c9bfd8fe2e94541bc2b477a5da6 548 PRINTS PR01900 YidC translocation/secretion protein signature 343 359 2.4E-25 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CVS42_RS00015 eafd2c9bfd8fe2e94541bc2b477a5da6 548 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 355 1.7E-122 T 29-03-2018 IPR028053 Membrane insertase YidC, N-terminal CVS42_RS00015 eafd2c9bfd8fe2e94541bc2b477a5da6 548 Pfam PF14849 YidC periplasmic domain 68 347 2.8E-92 T 29-03-2018 IPR028053 Membrane insertase YidC, N-terminal CVS42_RS00015 eafd2c9bfd8fe2e94541bc2b477a5da6 548 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.5E-98 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CVS42_RS00015 eafd2c9bfd8fe2e94541bc2b477a5da6 548 PRINTS PR00701 60kDa inner membrane protein signature 221 239 1.5E-98 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CVS42_RS00015 eafd2c9bfd8fe2e94541bc2b477a5da6 548 PRINTS PR00701 60kDa inner membrane protein signature 73 94 1.5E-98 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CVS42_RS00015 eafd2c9bfd8fe2e94541bc2b477a5da6 548 PRINTS PR00701 60kDa inner membrane protein signature 164 184 1.5E-98 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CVS42_RS00015 eafd2c9bfd8fe2e94541bc2b477a5da6 548 PRINTS PR00701 60kDa inner membrane protein signature 503 526 1.5E-98 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CVS42_RS00015 eafd2c9bfd8fe2e94541bc2b477a5da6 548 PRINTS PR00701 60kDa inner membrane protein signature 419 442 1.5E-98 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CVS42_RS00015 eafd2c9bfd8fe2e94541bc2b477a5da6 548 PRINTS PR00701 60kDa inner membrane protein signature 254 269 1.5E-98 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CVS42_RS00015 eafd2c9bfd8fe2e94541bc2b477a5da6 548 PRINTS PR00701 60kDa inner membrane protein signature 466 488 1.5E-98 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CVS42_RS00015 eafd2c9bfd8fe2e94541bc2b477a5da6 548 PRINTS PR00701 60kDa inner membrane protein signature 328 348 1.5E-98 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CVS42_RS00015 eafd2c9bfd8fe2e94541bc2b477a5da6 548 Pfam PF02096 60Kd inner membrane protein 358 537 7.5E-63 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CVS42_RS13495 79ff25ac2ab220cb2efffb58be60e2c7 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 2.0E-62 T 29-03-2018 CVS42_RS13495 79ff25ac2ab220cb2efffb58be60e2c7 208 Gene3D G3DSA:3.40.50.2020 1 206 1.1E-57 T 29-03-2018 CVS42_RS13495 79ff25ac2ab220cb2efffb58be60e2c7 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 1.1E-88 T 29-03-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CVS42_RS13495 79ff25ac2ab220cb2efffb58be60e2c7 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 43.543 T 29-03-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CVS42_RS13495 79ff25ac2ab220cb2efffb58be60e2c7 208 SUPERFAMILY SSF53271 3 206 1.11E-65 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CVS42_RS01845 7d97a72cde25b07d82e39281f18e9b3a 338 Gene3D G3DSA:3.40.50.1370 27 174 1.6E-49 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS01845 7d97a72cde25b07d82e39281f18e9b3a 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 182 333 7.2E-46 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CVS42_RS01845 7d97a72cde25b07d82e39281f18e9b3a 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 37 175 3.0E-42 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CVS42_RS01845 7d97a72cde25b07d82e39281f18e9b3a 338 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 37 335 1.3E-97 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS01845 7d97a72cde25b07d82e39281f18e9b3a 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 253 263 2.0E-22 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS01845 7d97a72cde25b07d82e39281f18e9b3a 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 111 124 2.0E-22 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS01845 7d97a72cde25b07d82e39281f18e9b3a 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 151 165 2.0E-22 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS01845 7d97a72cde25b07d82e39281f18e9b3a 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 314 325 2.0E-22 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS01845 7d97a72cde25b07d82e39281f18e9b3a 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 78 92 2.0E-22 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CVS42_RS01845 7d97a72cde25b07d82e39281f18e9b3a 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 288 297 2.1E-19 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS01845 7d97a72cde25b07d82e39281f18e9b3a 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 80 99 2.1E-19 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS01845 7d97a72cde25b07d82e39281f18e9b3a 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 300 323 2.1E-19 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS01845 7d97a72cde25b07d82e39281f18e9b3a 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 162 173 2.1E-19 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS01845 7d97a72cde25b07d82e39281f18e9b3a 338 SUPERFAMILY SSF53671 35 337 4.58E-89 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS01845 7d97a72cde25b07d82e39281f18e9b3a 338 Gene3D G3DSA:3.40.50.1370 175 335 1.1E-47 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CVS42_RS14415 5449dd2ee6135cfc8d955e1f5a44b361 264 Gene3D G3DSA:3.90.550.10 1 264 1.7E-25 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS14415 5449dd2ee6135cfc8d955e1f5a44b361 264 SUPERFAMILY SSF53448 2 264 5.44E-33 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS05440 e5a29de513e718afd8a4be13324783fc 261 Gene3D G3DSA:1.20.120.20 21 216 9.8E-4 T 29-03-2018 CVS42_RS09605 c0ad200dd791a0a5964e9d0378ceaf9a 182 SUPERFAMILY SSF55200 93 181 6.93E-35 T 29-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CVS42_RS09605 c0ad200dd791a0a5964e9d0378ceaf9a 182 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 18 181 1.7E-72 T 29-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CVS42_RS09605 c0ad200dd791a0a5964e9d0378ceaf9a 182 SUPERFAMILY SSF54364 16 89 2.09E-28 T 29-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CVS42_RS09605 c0ad200dd791a0a5964e9d0378ceaf9a 182 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 94 179 8.2E-38 T 29-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CVS42_RS09605 c0ad200dd791a0a5964e9d0378ceaf9a 182 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 18 87 8.0E-30 T 29-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CVS42_RS09605 c0ad200dd791a0a5964e9d0378ceaf9a 182 ProSitePatterns PS00938 Initiation factor 3 signature. 69 82 - T 29-03-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 CVS42_RS09605 c0ad200dd791a0a5964e9d0378ceaf9a 182 Gene3D G3DSA:3.10.20.80 13 89 1.5E-30 T 29-03-2018 CVS42_RS09605 c0ad200dd791a0a5964e9d0378ceaf9a 182 Gene3D G3DSA:3.30.110.10 90 182 3.6E-36 T 29-03-2018 CVS42_RS09605 c0ad200dd791a0a5964e9d0378ceaf9a 182 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 12 181 31.068 T 29-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CVS42_RS01085 6e5ee782b93b78cbea476feb13e5fd26 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 29-03-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01085 6e5ee782b93b78cbea476feb13e5fd26 100 Gene3D G3DSA:3.30.70.330 6 100 3.6E-32 T 29-03-2018 CVS42_RS01085 6e5ee782b93b78cbea476feb13e5fd26 100 Pfam PF00276 Ribosomal protein L23 9 95 1.3E-31 T 29-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CVS42_RS01085 6e5ee782b93b78cbea476feb13e5fd26 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.883 T 29-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CVS42_RS01085 6e5ee782b93b78cbea476feb13e5fd26 100 SUPERFAMILY SSF54189 3 93 1.33E-31 T 29-03-2018 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS00345 1a2b2bd667524fbd1723cf307a83e376 394 SUPERFAMILY SSF103473 5 382 4.45E-45 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS00345 1a2b2bd667524fbd1723cf307a83e376 394 Pfam PF07690 Major Facilitator Superfamily 18 327 3.0E-24 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS00345 1a2b2bd667524fbd1723cf307a83e376 394 Gene3D G3DSA:1.20.1250.20 1 192 1.1E-19 T 29-03-2018 CVS42_RS00345 1a2b2bd667524fbd1723cf307a83e376 394 Gene3D G3DSA:1.20.1250.20 193 386 1.5E-18 T 29-03-2018 CVS42_RS11100 8166a181844ceb57230bea1a1f64a26b 136 SUPERFAMILY SSF81273 95 136 4.71E-9 T 29-03-2018 CVS42_RS11100 8166a181844ceb57230bea1a1f64a26b 136 Gene3D G3DSA:4.10.430.10 96 136 5.2E-16 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CVS42_RS11100 8166a181844ceb57230bea1a1f64a26b 136 PIRSF PIRSF002096 1 136 6.0E-52 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CVS42_RS11100 8166a181844ceb57230bea1a1f64a26b 136 SUPERFAMILY SSF81273 2 58 1.04E-13 T 29-03-2018 CVS42_RS11100 8166a181844ceb57230bea1a1f64a26b 136 SMART SM00528 90 136 1.1E-16 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CVS42_RS11100 8166a181844ceb57230bea1a1f64a26b 136 Pfam PF00816 H-NS histone family 33 129 4.1E-18 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CVS42_RS11100 8166a181844ceb57230bea1a1f64a26b 136 Gene3D G3DSA:1.10.287.1050 1 57 2.7E-17 T 29-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 CVS42_RS00040 8cb994c013fc90f7356798a09ec7b0c3 222 Gene3D G3DSA:1.10.3720.10 3 222 4.5E-43 T 29-03-2018 CVS42_RS00040 8cb994c013fc90f7356798a09ec7b0c3 222 SUPERFAMILY SSF161098 14 204 2.49E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS00040 8cb994c013fc90f7356798a09ec7b0c3 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 113 8.7E-26 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CVS42_RS00040 8cb994c013fc90f7356798a09ec7b0c3 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 219 8.5E-16 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS12980 caa24d5a0211769a88dee063dfdd305f 220 SUPERFAMILY SSF53328 4 182 1.44E-28 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CVS42_RS12980 caa24d5a0211769a88dee063dfdd305f 220 Gene3D G3DSA:3.40.50.170 2 185 2.6E-28 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CVS42_RS12980 caa24d5a0211769a88dee063dfdd305f 220 Pfam PF00551 Formyl transferase 4 150 1.2E-22 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CVS42_RS01330 d3523004bc525b28e70b33f805d2d4d4 353 Pfam PF13343 Bacterial extracellular solute-binding protein 89 312 1.7E-32 T 29-03-2018 CVS42_RS01330 d3523004bc525b28e70b33f805d2d4d4 353 Gene3D G3DSA:3.40.190.10 42 175 2.7E-13 T 29-03-2018 CVS42_RS01330 d3523004bc525b28e70b33f805d2d4d4 353 Gene3D G3DSA:3.40.190.10 176 351 9.7E-20 T 29-03-2018 CVS42_RS01330 d3523004bc525b28e70b33f805d2d4d4 353 SUPERFAMILY SSF53850 41 346 2.22E-48 T 29-03-2018 CVS42_RS10425 9ba74eaa1e9e3fd8210a92d41fd30f5e 173 Pfam PF14316 Domain of unknown function (DUF4381) 13 156 2.5E-18 T 29-03-2018 IPR025489 Protein of unknown function (DUF4381 CVS42_RS13240 96eb7999ceae43b154e4cd1294f97bd4 419 Gene3D G3DSA:1.10.3860.10 1 408 7.7E-114 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS13240 96eb7999ceae43b154e4cd1294f97bd4 419 SUPERFAMILY SSF118215 6 402 1.96E-111 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS13240 96eb7999ceae43b154e4cd1294f97bd4 419 PRINTS PR00173 Glutamate-aspartate symporter signature 49 69 7.4E-38 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS13240 96eb7999ceae43b154e4cd1294f97bd4 419 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 7.4E-38 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS13240 96eb7999ceae43b154e4cd1294f97bd4 419 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 7.4E-38 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS13240 96eb7999ceae43b154e4cd1294f97bd4 419 PRINTS PR00173 Glutamate-aspartate symporter signature 355 375 7.4E-38 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS13240 96eb7999ceae43b154e4cd1294f97bd4 419 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 7.4E-38 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS13240 96eb7999ceae43b154e4cd1294f97bd4 419 PRINTS PR00173 Glutamate-aspartate symporter signature 79 104 7.4E-38 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS13240 96eb7999ceae43b154e4cd1294f97bd4 419 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 7.4E-38 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS13240 96eb7999ceae43b154e4cd1294f97bd4 419 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 7.4E-38 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS13240 96eb7999ceae43b154e4cd1294f97bd4 419 Pfam PF00375 Sodium:dicarboxylate symporter family 6 400 1.4E-110 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS05485 09b19eb3d58b1b96674429ce94c14ca1 637 Pfam PF02120 Flagellar hook-length control protein FliK 502 586 9.6E-22 T 29-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal CVS42_RS14085 b59399335bb0372094cd494b30dc3ed4 114 Gene3D G3DSA:1.20.1630.10 9 114 2.3E-4 T 29-03-2018 CVS42_RS13595 99bb3b0c2b75faa52fee6777adfb7442 246 Pfam PF13861 FlgD Tudor-like domain 86 218 1.1E-12 T 29-03-2018 IPR025963 FlgD Tudor-like domain CVS42_RS13595 99bb3b0c2b75faa52fee6777adfb7442 246 Pfam PF03963 Flagellar hook capping protein - N-terminal region 12 77 2.5E-19 T 29-03-2018 IPR005648 Flagellar hook capping protein CVS42_RS13595 99bb3b0c2b75faa52fee6777adfb7442 246 Pfam PF13860 FlgD Ig-like domain 117 179 7.7E-15 T 29-03-2018 IPR025965 FlgD Ig-like domain CVS42_RS10045 79bd5d774b08847001bb4e65130eea17 850 Pfam PF02470 MlaD protein 380 435 3.8E-8 T 29-03-2018 IPR003399 Mce/MlaD CVS42_RS10045 79bd5d774b08847001bb4e65130eea17 850 Pfam PF02470 MlaD protein 724 781 7.8E-8 T 29-03-2018 IPR003399 Mce/MlaD CVS42_RS10045 79bd5d774b08847001bb4e65130eea17 850 Pfam PF02470 MlaD protein 624 682 5.6E-7 T 29-03-2018 IPR003399 Mce/MlaD CVS42_RS10045 79bd5d774b08847001bb4e65130eea17 850 Pfam PF02470 MlaD protein 40 131 1.1E-12 T 29-03-2018 IPR003399 Mce/MlaD CVS42_RS13890 a1b922591d235a9f7b88b920750a5576 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 78 91 8.3E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS13890 a1b922591d235a9f7b88b920750a5576 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 8.3E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS13890 a1b922591d235a9f7b88b920750a5576 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 35 50 8.3E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS13890 a1b922591d235a9f7b88b920750a5576 254 PRINTS PR00412 Epoxide hydrolase signature 35 50 9.8E-9 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CVS42_RS13890 a1b922591d235a9f7b88b920750a5576 254 PRINTS PR00412 Epoxide hydrolase signature 78 91 9.8E-9 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CVS42_RS13890 a1b922591d235a9f7b88b920750a5576 254 PRINTS PR00412 Epoxide hydrolase signature 227 249 9.8E-9 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CVS42_RS13890 a1b922591d235a9f7b88b920750a5576 254 PRINTS PR00412 Epoxide hydrolase signature 92 105 9.8E-9 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CVS42_RS13890 a1b922591d235a9f7b88b920750a5576 254 Pfam PF12697 Alpha/beta hydrolase family 12 243 4.0E-24 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS13890 a1b922591d235a9f7b88b920750a5576 254 Gene3D G3DSA:3.40.50.1820 4 252 1.3E-50 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS13890 a1b922591d235a9f7b88b920750a5576 254 SUPERFAMILY SSF53474 2 250 7.58E-56 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS02335 ea7d233b540757e245aafe226f27d104 224 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 62 167 6.4E-13 T 29-03-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted CVS42_RS09100 c87a89b8423c017f8e60ebd7c244368f 404 Pfam PF03695 Uncharacterised protein family (UPF0149) 9 123 2.5E-12 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CVS42_RS09100 c87a89b8423c017f8e60ebd7c244368f 404 SUPERFAMILY SSF48452 257 360 3.8E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS09100 c87a89b8423c017f8e60ebd7c244368f 404 Gene3D G3DSA:1.25.40.10 192 317 1.1E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS09100 c87a89b8423c017f8e60ebd7c244368f 404 SUPERFAMILY SSF101327 9 119 1.83E-13 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CVS42_RS07200 d656f0083b780e7932b33230c392312b 407 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 10 399 7.9E-130 T 29-03-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 CVS42_RS07200 d656f0083b780e7932b33230c392312b 407 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 303 316 - T 29-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CVS42_RS07200 d656f0083b780e7932b33230c392312b 407 Pfam PF01494 FAD binding domain 9 329 6.7E-20 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 CVS42_RS07200 d656f0083b780e7932b33230c392312b 407 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 10 398 1.1E-121 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CVS42_RS07200 d656f0083b780e7932b33230c392312b 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 4.5E-14 T 29-03-2018 CVS42_RS07200 d656f0083b780e7932b33230c392312b 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 304 4.5E-14 T 29-03-2018 CVS42_RS07200 d656f0083b780e7932b33230c392312b 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 320 4.5E-14 T 29-03-2018 CVS42_RS07200 d656f0083b780e7932b33230c392312b 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 165 180 4.5E-14 T 29-03-2018 CVS42_RS07200 d656f0083b780e7932b33230c392312b 407 Gene3D G3DSA:3.50.50.60 7 372 3.9E-39 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS07200 d656f0083b780e7932b33230c392312b 407 SUPERFAMILY SSF51905 276 391 4.46E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS07200 d656f0083b780e7932b33230c392312b 407 SUPERFAMILY SSF51905 9 186 4.46E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS10155 d68594e606ffdd78180c8c9eaaf2161d 574 Pfam PF02378 Phosphotransferase system, EIIC 244 507 1.5E-17 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CVS42_RS10155 d68594e606ffdd78180c8c9eaaf2161d 574 SUPERFAMILY SSF52794 120 221 3.49E-37 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CVS42_RS10155 d68594e606ffdd78180c8c9eaaf2161d 574 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 227 563 1.0E-140 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CVS42_RS10155 d68594e606ffdd78180c8c9eaaf2161d 574 Gene3D G3DSA:3.40.50.2300 2 99 1.5E-22 T 29-03-2018 CVS42_RS10155 d68594e606ffdd78180c8c9eaaf2161d 574 SUPERFAMILY SSF52794 4 102 1.03E-22 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CVS42_RS10155 d68594e606ffdd78180c8c9eaaf2161d 574 Gene3D G3DSA:3.40.50.2300 120 218 1.5E-38 T 29-03-2018 CVS42_RS10155 d68594e606ffdd78180c8c9eaaf2161d 574 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 122 205 2.5E-38 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CVS42_RS10155 d68594e606ffdd78180c8c9eaaf2161d 574 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 94 7.4E-12 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CVS42_RS10155 d68594e606ffdd78180c8c9eaaf2161d 574 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 123 209 2.4E-19 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CVS42_RS05830 f5fd0eb505df0023b5b63c3a1e628074 151 Pfam PF09621 Type III secretion system regulator (LcrR) 9 147 1.2E-54 T 29-03-2018 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 CVS42_RS05830 f5fd0eb505df0023b5b63c3a1e628074 151 TIGRFAM TIGR02572 LcrR: type III secretion system regulator LcrR 8 147 1.2E-55 T 29-03-2018 IPR013405 Type III secretion system regulator, LcrR CVS42_RS15420 18e8bdd6e82ff1a044c5dfd22f9084f2 88 Gene3D G3DSA:1.10.3100.10 1 87 5.2E-12 T 29-03-2018 IPR027910 YdiL-like domain CVS42_RS15420 18e8bdd6e82ff1a044c5dfd22f9084f2 88 Pfam PF01381 Helix-turn-helix 12 58 5.0E-9 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS15420 18e8bdd6e82ff1a044c5dfd22f9084f2 88 SMART SM00530 11 68 1.1E-5 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS15420 18e8bdd6e82ff1a044c5dfd22f9084f2 88 SUPERFAMILY SSF47413 4 64 5.63E-11 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS19160 956b01825665aa9fb87df16cc12d2ee8 216 TIGRFAM TIGR03579 EF_0833: conserved hypothetical protein EF_0833/AHA_3914 7 215 9.5E-122 T 29-03-2018 IPR025456 Protein of unknown function DUF4310 CVS42_RS19160 956b01825665aa9fb87df16cc12d2ee8 216 Pfam PF14187 Domain of unknown function (DUF4310) 6 213 1.3E-103 T 29-03-2018 IPR025456 Protein of unknown function DUF4310 CVS42_RS13285 de87692a723cc45f1abc741733abfce3 198 Pfam PF13036 Peptidoglycan-synthase activator LpoB 43 187 1.9E-51 T 29-03-2018 IPR014094 Penicillin-binding protein activator LpoB CVS42_RS13285 de87692a723cc45f1abc741733abfce3 198 Gene3D G3DSA:3.40.50.10070 61 194 9.4E-15 T 29-03-2018 CVS42_RS13285 de87692a723cc45f1abc741733abfce3 198 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 7 189 1.3E-64 T 29-03-2018 IPR014094 Penicillin-binding protein activator LpoB CVS42_RS01600 d321b557e55f8c478c448ce52955b73f 241 Pfam PF05944 Phage small terminase subunit 40 173 3.7E-36 T 29-03-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 CVS42_RS11605 5eb054a0a22542bde314415649d056d4 153 Pfam PF11143 Protein of unknown function (DUF2919) 4 149 4.9E-46 T 29-03-2018 IPR021318 Protein of unknown function DUF2919 CVS42_RS18875 255955726b2106f48ed92d208577d6c2 152 Pfam PF03748 Flagellar basal body-associated protein FliL 53 152 2.2E-11 T 29-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CVS42_RS05530 f2e7a99de669d8c9b87802e00b438404 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 37 50 6.6E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS05530 f2e7a99de669d8c9b87802e00b438404 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 190 207 6.6E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS05530 f2e7a99de669d8c9b87802e00b438404 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 74 93 6.6E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS05530 f2e7a99de669d8c9b87802e00b438404 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 241 255 6.6E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS05530 f2e7a99de669d8c9b87802e00b438404 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 160 178 6.6E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS05530 f2e7a99de669d8c9b87802e00b438404 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 141 157 6.6E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS05530 f2e7a99de669d8c9b87802e00b438404 697 PIRSF PIRSF005419 16 697 7.8E-246 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS05530 f2e7a99de669d8c9b87802e00b438404 697 Pfam PF00771 FHIPEP family 31 686 7.7E-269 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CVS42_RS05530 f2e7a99de669d8c9b87802e00b438404 697 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 146 169 - T 29-03-2018 IPR025505 FHIPEP conserved site CVS42_RS05530 f2e7a99de669d8c9b87802e00b438404 697 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 694 2.4E-265 T 29-03-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 CVS42_RS19880 85cbd1fc2e7fe3fcc1f819b93fefa7eb 557 Pfam PF05228 CHASE4 domain 57 213 2.2E-25 T 29-03-2018 IPR007892 CHASE4 CVS42_RS19880 85cbd1fc2e7fe3fcc1f819b93fefa7eb 557 SMART SM00267 355 526 2.7E-40 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS19880 85cbd1fc2e7fe3fcc1f819b93fefa7eb 557 SUPERFAMILY SSF55073 371 525 7.53E-36 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS19880 85cbd1fc2e7fe3fcc1f819b93fefa7eb 557 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 363 523 1.3E-32 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS19880 85cbd1fc2e7fe3fcc1f819b93fefa7eb 557 Gene3D G3DSA:3.30.70.270 360 538 1.0E-42 T 29-03-2018 CVS42_RS19880 85cbd1fc2e7fe3fcc1f819b93fefa7eb 557 Pfam PF00990 Diguanylate cyclase, GGDEF domain 366 522 4.6E-31 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS13295 167e50af2657c8eec41231870143ee48 285 PIRSF PIRSF028200 10 285 8.3E-63 T 29-03-2018 IPR016875 Uncharacterised conserved protein UCP028200 CVS42_RS20205 c51ad595d93b6b38b98d7be35759c038 272 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 154 174 - T 29-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site CVS42_RS20205 c51ad595d93b6b38b98d7be35759c038 272 Pfam PF00795 Carbon-nitrogen hydrolase 32 260 2.9E-54 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CVS42_RS20205 c51ad595d93b6b38b98d7be35759c038 272 Gene3D G3DSA:3.60.110.10 1 271 2.6E-74 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CVS42_RS20205 c51ad595d93b6b38b98d7be35759c038 272 SUPERFAMILY SSF56317 1 268 2.09E-79 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CVS42_RS02515 8e5ef04f1fe84de1ed44524f03b8325f 278 Pfam PF13503 Domain of unknown function (DUF4123) 14 127 9.5E-16 T 29-03-2018 IPR025391 Domain of unknown function DUF4123 CVS42_RS10420 65e9eb456d45ede3fd0e4e6f8fb0b27f 327 Gene3D G3DSA:3.40.50.410 77 261 1.2E-17 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS10420 65e9eb456d45ede3fd0e4e6f8fb0b27f 327 Pfam PF01882 Protein of unknown function DUF58 65 150 1.0E-20 T 29-03-2018 IPR002881 Domain of unknown function DUF58 CVS42_RS10420 65e9eb456d45ede3fd0e4e6f8fb0b27f 327 SUPERFAMILY SSF53300 101 221 1.17E-5 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS03150 ae8e8ad5ace1a99d016360f78bb34744 149 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 26 148 29.815 T 29-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CVS42_RS03150 ae8e8ad5ace1a99d016360f78bb34744 149 SUPERFAMILY SSF57716 109 147 6.41E-10 T 29-03-2018 CVS42_RS03150 ae8e8ad5ace1a99d016360f78bb34744 149 SUPERFAMILY SSF109635 8 108 6.02E-36 T 29-03-2018 CVS42_RS03150 ae8e8ad5ace1a99d016360f78bb34744 149 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 109 141 4.0E-10 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CVS42_RS03150 ae8e8ad5ace1a99d016360f78bb34744 149 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 30 138 5.8E-51 T 29-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CVS42_RS03150 ae8e8ad5ace1a99d016360f78bb34744 149 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 112 136 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CVS42_RS17685 86b268ab172130af1a88bd56071af6ef 147 Gene3D G3DSA:1.10.1510.10 1 90 1.0E-30 T 29-03-2018 CVS42_RS17685 86b268ab172130af1a88bd56071af6ef 147 SUPERFAMILY SSF89095 2 146 1.46E-40 T 29-03-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CVS42_RS17685 86b268ab172130af1a88bd56071af6ef 147 Pfam PF09424 Yqey-like protein 4 146 2.2E-54 T 29-03-2018 IPR019004 Uncharacterised domain YOR215C, mitochondrial CVS42_RS17685 86b268ab172130af1a88bd56071af6ef 147 Gene3D G3DSA:1.10.10.410 91 147 5.5E-15 T 29-03-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CVS42_RS12720 59c047a60fb5af8b860c75c4d38ac4b2 290 Gene3D G3DSA:3.30.65.10 230 290 1.3E-14 T 29-03-2018 CVS42_RS12720 59c047a60fb5af8b860c75c4d38ac4b2 290 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 247 284 1.9E-11 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CVS42_RS12720 59c047a60fb5af8b860c75c4d38ac4b2 290 SUPERFAMILY SSF144020 106 273 1.96E-5 T 29-03-2018 IPR024064 FdhE-like CVS42_RS12720 59c047a60fb5af8b860c75c4d38ac4b2 290 Pfam PF08378 Nuclease-related domain 33 144 7.0E-26 T 29-03-2018 IPR011528 Nuclease-related domain, NERD CVS42_RS12720 59c047a60fb5af8b860c75c4d38ac4b2 290 SUPERFAMILY SSF57783 232 282 6.8E-9 T 29-03-2018 CVS42_RS17375 b70a08ae9bfd58d3e6ce01ea7c95df6d 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 3.3E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS17375 b70a08ae9bfd58d3e6ce01ea7c95df6d 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 3.3E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS17375 b70a08ae9bfd58d3e6ce01ea7c95df6d 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 65 3.3E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS17375 b70a08ae9bfd58d3e6ce01ea7c95df6d 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 3.3E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS17375 b70a08ae9bfd58d3e6ce01ea7c95df6d 200 Gene3D G3DSA:3.40.50.720 1 199 2.6E-31 T 29-03-2018 CVS42_RS17375 b70a08ae9bfd58d3e6ce01ea7c95df6d 200 SUPERFAMILY SSF51735 1 200 8.9E-30 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS17375 b70a08ae9bfd58d3e6ce01ea7c95df6d 200 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 36 169 1.4E-15 T 29-03-2018 CVS42_RS17025 ca33bcd822aea6fc68dfd76c0dc137b2 447 Pfam PF00860 Permease family 33 406 1.4E-43 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CVS42_RS17025 ca33bcd822aea6fc68dfd76c0dc137b2 447 PIRSF PIRSF005353 7 446 4.0E-172 T 29-03-2018 IPR026033 Purine permease PbuG-like CVS42_RS14530 84c347028a5005c66566a8803191cf1d 263 Pfam PF01061 ABC-2 type transporter 13 224 1.4E-27 T 29-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CVS42_RS14530 84c347028a5005c66566a8803191cf1d 263 PIRSF PIRSF006648 2 256 2.1E-16 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CVS42_RS11500 9db5cf7e15b2ababea2cab386ecce9a4 581 Gene3D G3DSA:3.40.50.300 1 190 7.1E-11 T 29-03-2018 CVS42_RS11500 9db5cf7e15b2ababea2cab386ecce9a4 581 SUPERFAMILY SSF52540 3 214 2.28E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11500 9db5cf7e15b2ababea2cab386ecce9a4 581 Pfam PF07693 KAP family P-loop domain 5 65 1.5E-5 T 29-03-2018 IPR011646 KAP family P-loop domain CVS42_RS08450 e64cecfc76a5026fbfa870a3440cd338 249 Gene3D G3DSA:3.40.190.10 152 249 1.1E-8 T 29-03-2018 CVS42_RS08450 e64cecfc76a5026fbfa870a3440cd338 249 Gene3D G3DSA:3.40.190.10 15 151 3.1E-14 T 29-03-2018 CVS42_RS08450 e64cecfc76a5026fbfa870a3440cd338 249 SUPERFAMILY SSF53850 18 248 2.25E-31 T 29-03-2018 CVS42_RS08450 e64cecfc76a5026fbfa870a3440cd338 249 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 248 7.7E-20 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS08450 e64cecfc76a5026fbfa870a3440cd338 249 SMART SM00062 26 249 0.0085 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS09095 6dd573a143d2eb9b754fccf2ae8c90e5 189 PRINTS PR00598 Bacterial regulatory protein MarR family signature 125 141 2.6E-5 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS09095 6dd573a143d2eb9b754fccf2ae8c90e5 189 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 121 2.6E-5 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS09095 6dd573a143d2eb9b754fccf2ae8c90e5 189 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 2.6E-5 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS09095 6dd573a143d2eb9b754fccf2ae8c90e5 189 Gene3D G3DSA:1.10.10.10 13 186 1.5E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS09095 6dd573a143d2eb9b754fccf2ae8c90e5 189 Pfam PF12802 MarR family 71 128 5.8E-11 T 29-03-2018 CVS42_RS09095 6dd573a143d2eb9b754fccf2ae8c90e5 189 SUPERFAMILY SSF46785 43 182 7.52E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS09095 6dd573a143d2eb9b754fccf2ae8c90e5 189 SMART SM00347 65 164 6.5E-11 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CVS42_RS21910 8e65b6b6a4e8bef5fc4a27d238a6508c 429 SMART SM00490 270 351 1.4E-33 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS21910 8e65b6b6a4e8bef5fc4a27d238a6508c 429 Gene3D G3DSA:3.40.50.300 9 234 7.1E-49 T 29-03-2018 CVS42_RS21910 8e65b6b6a4e8bef5fc4a27d238a6508c 429 SMART SM00487 28 234 4.6E-49 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS21910 8e65b6b6a4e8bef5fc4a27d238a6508c 429 SUPERFAMILY SSF52540 84 365 1.28E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS21910 8e65b6b6a4e8bef5fc4a27d238a6508c 429 Pfam PF00270 DEAD/DEAH box helicase 33 206 6.8E-44 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CVS42_RS21910 8e65b6b6a4e8bef5fc4a27d238a6508c 429 Pfam PF00271 Helicase conserved C-terminal domain 242 351 1.5E-30 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS21910 8e65b6b6a4e8bef5fc4a27d238a6508c 429 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.276 T 29-03-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 CVS42_RS21910 8e65b6b6a4e8bef5fc4a27d238a6508c 429 Gene3D G3DSA:3.40.50.300 235 428 3.0E-47 T 29-03-2018 CVS42_RS21910 8e65b6b6a4e8bef5fc4a27d238a6508c 429 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CVS42_RS11130 ec15d149068d23d7e056c09ecd8e45c6 164 Pfam PF00959 Phage lysozyme 41 137 7.0E-10 T 29-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CVS42_RS11130 ec15d149068d23d7e056c09ecd8e45c6 164 Gene3D G3DSA:1.10.530.40 1 164 1.9E-38 T 29-03-2018 IPR023347 Lysozyme domain GO:0003796 CVS42_RS11130 ec15d149068d23d7e056c09ecd8e45c6 164 SUPERFAMILY SSF53955 6 163 4.3E-32 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS09110 a436c02d865f92827d9674d6710b6e9b 103 Pfam PF14375 Cysteine-rich CWC 53 95 2.0E-6 T 29-03-2018 IPR032720 Cysteine-rich CWC CVS42_RS09110 a436c02d865f92827d9674d6710b6e9b 103 Pfam PF06945 Protein of unknown function (DUF1289) 3 45 1.8E-16 T 29-03-2018 IPR010710 Protein of unknown function DUF1289 CVS42_RS00140 260401211fd8318c70664bf32061a09d 564 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 559 32.082 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CVS42_RS00140 260401211fd8318c70664bf32061a09d 564 Pfam PF03814 Potassium-transporting ATPase A subunit 10 557 9.5E-220 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CVS42_RS00140 260401211fd8318c70664bf32061a09d 564 PIRSF PIRSF001294 1 561 5.3E-221 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CVS42_RS00140 260401211fd8318c70664bf32061a09d 564 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 9 559 7.5E-206 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CVS42_RS16405 baa2a0730bae0e835222569af2782b60 384 Pfam PF16539 Flagellar assembly protein T, middle domain 110 263 2.6E-40 T 29-03-2018 IPR032386 Flagellar assembly protein T, middle domain CVS42_RS16405 baa2a0730bae0e835222569af2782b60 384 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 20 105 2.8E-20 T 29-03-2018 IPR032370 Flagellar assembly protein T, N-terminal CVS42_RS16405 baa2a0730bae0e835222569af2782b60 384 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 310 382 1.4E-19 T 29-03-2018 IPR032388 Flagellar assembly protein T, C-terminal CVS42_RS08890 7a32039411c78343afaa10234d08a590 164 Pfam PF04073 Aminoacyl-tRNA editing domain 19 145 2.9E-28 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CVS42_RS08890 7a32039411c78343afaa10234d08a590 164 Gene3D G3DSA:3.90.960.10 2 163 1.1E-31 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CVS42_RS08890 7a32039411c78343afaa10234d08a590 164 SUPERFAMILY SSF55826 4 158 6.54E-40 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CVS42_RS08590 13d95fd0a5790765f5e24b24652ed67c 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 1.0E-33 T 29-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CVS42_RS08590 13d95fd0a5790765f5e24b24652ed67c 114 PIRSF PIRSF000169 1 114 2.2E-38 T 29-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CVS42_RS08590 13d95fd0a5790765f5e24b24652ed67c 114 SUPERFAMILY SSF81343 5 114 1.7E-27 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS08590 13d95fd0a5790765f5e24b24652ed67c 114 Gene3D G3DSA:1.20.1300.10 1 114 2.9E-16 T 29-03-2018 CVS42_RS08590 13d95fd0a5790765f5e24b24652ed67c 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 103 1.0E-6 T 29-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CVS42_RS16940 850c4133601ea899975b1a7746a17148 254 PIRSF PIRSF028069 2 254 2.5E-87 T 29-03-2018 IPR016866 Uncharacterised conserved protein UCP028069 CVS42_RS16940 850c4133601ea899975b1a7746a17148 254 Pfam PF11932 Protein of unknown function (DUF3450) 10 248 1.1E-89 T 29-03-2018 IPR016866 Uncharacterised conserved protein UCP028069 CVS42_RS17235 c9814fde134530cd794f3ca05b86ac91 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 29-03-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS17235 c9814fde134530cd794f3ca05b86ac91 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.9E-38 T 29-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17235 c9814fde134530cd794f3ca05b86ac91 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 4.7E-43 T 29-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17235 c9814fde134530cd794f3ca05b86ac91 103 SUPERFAMILY SSF141091 1 102 4.32E-38 T 29-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS17235 c9814fde134530cd794f3ca05b86ac91 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.277 T 29-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CVS42_RS19510 9ce33d6fe555823a01cf57aa64d19121 226 Gene3D G3DSA:1.20.58.220 112 225 7.0E-6 T 29-03-2018 CVS42_RS19510 9ce33d6fe555823a01cf57aa64d19121 226 Pfam PF01865 Protein of unknown function DUF47 7 224 3.6E-66 T 29-03-2018 IPR018445 Putative phosphate transport regulator CVS42_RS19510 9ce33d6fe555823a01cf57aa64d19121 226 SUPERFAMILY SSF109755 29 209 1.06E-15 T 29-03-2018 CVS42_RS19510 9ce33d6fe555823a01cf57aa64d19121 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 5 226 5.6E-68 T 29-03-2018 IPR002727 Protein of unknown function DUF47 CVS42_RS19510 9ce33d6fe555823a01cf57aa64d19121 226 Gene3D G3DSA:1.20.58.220 11 111 0.086 T 29-03-2018 CVS42_RS19425 9a4f6f765f16432b4922342aa9c5e75a 135 SUPERFAMILY SSF55724 1 133 5.02E-38 T 29-03-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Reactome: R-HSA-5576892 CVS42_RS19425 9a4f6f765f16432b4922342aa9c5e75a 135 Gene3D G3DSA:3.40.1000.10 1 135 2.0E-20 T 29-03-2018 CVS42_RS19425 9a4f6f765f16432b4922342aa9c5e75a 135 Pfam PF08786 DcrB 6 130 1.4E-32 T 29-03-2018 IPR014894 Protein DcrB CVS42_RS15165 9a4f6f765f16432b4922342aa9c5e75a 135 SUPERFAMILY SSF55724 1 133 5.02E-38 T 29-03-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Reactome: R-HSA-5576892 CVS42_RS15165 9a4f6f765f16432b4922342aa9c5e75a 135 Gene3D G3DSA:3.40.1000.10 1 135 2.0E-20 T 29-03-2018 CVS42_RS15165 9a4f6f765f16432b4922342aa9c5e75a 135 Pfam PF08786 DcrB 6 130 1.4E-32 T 29-03-2018 IPR014894 Protein DcrB CVS42_RS04085 ede91ded114fa2d82d9a45f328be6f29 170 Pfam PF06228 Haem utilisation ChuX/HutX 23 160 1.0E-34 T 29-03-2018 IPR010413 Heme utilization carrier protein HutX-like CVS42_RS04085 ede91ded114fa2d82d9a45f328be6f29 170 PIRSF PIRSF030840 1 166 3.7E-58 T 29-03-2018 IPR010413 Heme utilization carrier protein HutX-like CVS42_RS04085 ede91ded114fa2d82d9a45f328be6f29 170 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 7 160 2.7E-63 T 29-03-2018 IPR010413 Heme utilization carrier protein HutX-like CVS42_RS04085 ede91ded114fa2d82d9a45f328be6f29 170 Gene3D G3DSA:3.40.1570.10 3 170 3.2E-46 T 29-03-2018 CVS42_RS04085 ede91ded114fa2d82d9a45f328be6f29 170 SUPERFAMILY SSF144064 4 162 2.09E-55 T 29-03-2018 CVS42_RS03500 834f2315be9f11d2eac5395c1ad2c132 567 Pfam PF01425 Amidase 25 347 5.2E-47 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CVS42_RS03500 834f2315be9f11d2eac5395c1ad2c132 567 Pfam PF01425 Amidase 462 544 4.3E-7 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CVS42_RS03500 834f2315be9f11d2eac5395c1ad2c132 567 SUPERFAMILY SSF75304 1 561 5.1E-88 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CVS42_RS03500 834f2315be9f11d2eac5395c1ad2c132 567 Gene3D G3DSA:3.90.1300.10 1 566 2.1E-118 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CVS42_RS11860 a684571ea17d43fd736920bb76ebef0d 235 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 1.2E-83 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CVS42_RS11860 a684571ea17d43fd736920bb76ebef0d 235 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 1.0E-84 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CVS42_RS11860 a684571ea17d43fd736920bb76ebef0d 235 PIRSF PIRSF006293 1 222 9.1E-83 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CVS42_RS11860 a684571ea17d43fd736920bb76ebef0d 235 Gene3D G3DSA:3.40.50.620 1 229 7.1E-55 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CVS42_RS11860 a684571ea17d43fd736920bb76ebef0d 235 SUPERFAMILY SSF52402 1 212 4.41E-67 T 29-03-2018 CVS42_RS11860 a684571ea17d43fd736920bb76ebef0d 235 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 50.188 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CVS42_RS08705 40cc7bf97fe25e69b257d1b9fa7b788d 480 Pfam PF02335 Cytochrome c552 45 474 1.4E-179 T 29-03-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CVS42_RS08705 40cc7bf97fe25e69b257d1b9fa7b788d 480 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 40 476 1.5E-245 T 29-03-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CVS42_RS08705 40cc7bf97fe25e69b257d1b9fa7b788d 480 Hamap MF_01182 Cytochrome c-552 [nrfA]. 5 479 57.552 T 29-03-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CVS42_RS08705 40cc7bf97fe25e69b257d1b9fa7b788d 480 Gene3D G3DSA:1.10.1130.10 43 345 1.8E-78 T 29-03-2018 CVS42_RS08705 40cc7bf97fe25e69b257d1b9fa7b788d 480 SUPERFAMILY SSF48695 39 474 2.1E-163 T 29-03-2018 IPR011031 Multihaem cytochrome CVS42_RS08705 40cc7bf97fe25e69b257d1b9fa7b788d 480 PIRSF PIRSF000243 28 480 2.5E-124 T 29-03-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CVS42_RS21015 9992983cc4d406b5fc85970208516ceb 218 SUPERFAMILY SSF46626 127 216 9.6E-23 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS21015 9992983cc4d406b5fc85970208516ceb 218 Pfam PF00034 Cytochrome c 38 118 6.8E-11 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS21015 9992983cc4d406b5fc85970208516ceb 218 Pfam PF00034 Cytochrome c 130 216 5.0E-12 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS21015 9992983cc4d406b5fc85970208516ceb 218 PRINTS PR00605 Class IC cytochrome C signature 192 214 5.5E-5 T 29-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CVS42_RS21015 9992983cc4d406b5fc85970208516ceb 218 PRINTS PR00605 Class IC cytochrome C signature 45 56 5.5E-5 T 29-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CVS42_RS21015 9992983cc4d406b5fc85970208516ceb 218 SUPERFAMILY SSF46626 32 117 3.75E-20 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS21015 9992983cc4d406b5fc85970208516ceb 218 Gene3D G3DSA:1.10.760.10 27 117 1.4E-21 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS21015 9992983cc4d406b5fc85970208516ceb 218 Gene3D G3DSA:1.10.760.10 118 216 1.5E-26 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CVS42_RS21015 9992983cc4d406b5fc85970208516ceb 218 PIRSF PIRSF000005 8 218 7.6E-65 T 29-03-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 CVS42_RS12040 05496e00d17c2717dd4af84c365a5a5e 239 Gene3D G3DSA:3.40.470.10 36 224 6.5E-4 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CVS42_RS21005 43959f75648d8e845fa0d0fe3a68de78 195 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 182 16.156 T 29-03-2018 IPR007336 Der GTPase activator GO:0005096 CVS42_RS21005 43959f75648d8e845fa0d0fe3a68de78 195 Pfam PF04220 Der GTPase activator (YihI) 9 152 2.6E-47 T 29-03-2018 IPR007336 Der GTPase activator GO:0005096 CVS42_RS14740 0db1db4891dcdd6cb1e26d312e2f074e 258 Pfam PF09825 Biotin-protein ligase, N terminal 152 226 2.7E-6 T 29-03-2018 IPR019197 Biotin-protein ligase, N-terminal Reactome: R-HSA-196780 CVS42_RS14740 0db1db4891dcdd6cb1e26d312e2f074e 258 SUPERFAMILY SSF52317 48 222 1.55E-13 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS14740 0db1db4891dcdd6cb1e26d312e2f074e 258 Gene3D G3DSA:3.40.50.880 6 257 1.3E-21 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS14740 0db1db4891dcdd6cb1e26d312e2f074e 258 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 70 124 1.9E-5 T 29-03-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CVS42_RS02040 572f3f0caa8f6bfa861f68cef8c18716 919 Pfam PF01752 Collagenase 642 851 1.1E-72 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CVS42_RS02040 572f3f0caa8f6bfa861f68cef8c18716 919 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 388 406 1.2E-25 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CVS42_RS02040 572f3f0caa8f6bfa861f68cef8c18716 919 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 785 800 1.2E-25 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CVS42_RS02040 572f3f0caa8f6bfa861f68cef8c18716 919 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 701 715 1.2E-25 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CVS42_RS02040 572f3f0caa8f6bfa861f68cef8c18716 919 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 719 735 1.2E-25 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CVS42_RS02040 572f3f0caa8f6bfa861f68cef8c18716 919 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 762 780 1.2E-25 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CVS42_RS02745 cdf43ade490ff22d0468d2879e65e168 423 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 12 414 5.1E-102 T 29-03-2018 IPR005219 Conserved hypothetical protein CHP00155 CVS42_RS02745 cdf43ade490ff22d0468d2879e65e168 423 Pfam PF04403 Paraquat-inducible protein A 60 208 7.3E-40 T 29-03-2018 IPR007498 Paraquat-inducible protein A CVS42_RS02745 cdf43ade490ff22d0468d2879e65e168 423 Pfam PF04403 Paraquat-inducible protein A 260 415 6.5E-56 T 29-03-2018 IPR007498 Paraquat-inducible protein A CVS42_RS13685 32477c7132bdebb0ffa6b68448771370 616 Gene3D G3DSA:3.90.76.10 87 182 3.0E-19 T 29-03-2018 CVS42_RS13685 32477c7132bdebb0ffa6b68448771370 616 Gene3D G3DSA:3.40.190.10 183 335 4.4E-20 T 29-03-2018 CVS42_RS13685 32477c7132bdebb0ffa6b68448771370 616 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 105 484 4.2E-58 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CVS42_RS13685 32477c7132bdebb0ffa6b68448771370 616 SUPERFAMILY SSF53850 56 559 9.77E-93 T 29-03-2018 CVS42_RS13685 32477c7132bdebb0ffa6b68448771370 616 Gene3D G3DSA:3.10.105.10 336 541 4.7E-34 T 29-03-2018 CVS42_RS13685 32477c7132bdebb0ffa6b68448771370 616 PIRSF PIRSF002741 21 569 1.0E-72 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CVS42_RS04625 b793cdd6b487345d4b795b0bc8e670b7 215 Gene3D G3DSA:3.40.50.150 39 111 0.0013 T 29-03-2018 CVS42_RS04625 b793cdd6b487345d4b795b0bc8e670b7 215 SUPERFAMILY SSF53335 60 195 6.99E-23 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS04625 b793cdd6b487345d4b795b0bc8e670b7 215 Gene3D G3DSA:3.40.50.150 112 202 1.1E-13 T 29-03-2018 CVS42_RS04625 b793cdd6b487345d4b795b0bc8e670b7 215 Pfam PF13489 Methyltransferase domain 66 198 7.5E-24 T 29-03-2018 CVS42_RS03085 cf94ca2343d8e42a8feaccc9deb0515f 180 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 21 178 3.0E-73 T 29-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CVS42_RS03085 cf94ca2343d8e42a8feaccc9deb0515f 180 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 4 179 1.4E-76 T 29-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CVS42_RS03085 cf94ca2343d8e42a8feaccc9deb0515f 180 Gene3D G3DSA:3.40.30.10 17 178 0.0011 T 29-03-2018 CVS42_RS09810 de47bb96485c471efa3c2642314bb268 212 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 212 27.508 T 29-03-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 CVS42_RS09810 de47bb96485c471efa3c2642314bb268 212 Gene3D G3DSA:1.10.1710.10 1 120 5.3E-36 T 29-03-2018 IPR016103 ProQ/FinO domain CVS42_RS09810 de47bb96485c471efa3c2642314bb268 212 Pfam PF17516 ProQ C-terminal domain 162 211 1.8E-22 T 29-03-2018 IPR035236 RNA chaperone ProQ, C-terminal CVS42_RS09810 de47bb96485c471efa3c2642314bb268 212 SUPERFAMILY SSF48657 2 109 2.35E-35 T 29-03-2018 IPR016103 ProQ/FinO domain CVS42_RS09810 de47bb96485c471efa3c2642314bb268 212 Pfam PF04352 ProQ/FINO family 8 115 1.0E-40 T 29-03-2018 IPR016103 ProQ/FinO domain CVS42_RS09810 de47bb96485c471efa3c2642314bb268 212 SMART SM00945 5 119 1.2E-59 T 29-03-2018 IPR016103 ProQ/FinO domain CVS42_RS10235 acefccf5d4ba5d927dfbf068f5945327 128 Gene3D G3DSA:3.90.1590.10 1 128 3.0E-36 T 29-03-2018 CVS42_RS10235 acefccf5d4ba5d927dfbf068f5945327 128 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 109 5.9E-20 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CVS42_RS10235 acefccf5d4ba5d927dfbf068f5945327 128 SUPERFAMILY SSF51316 6 127 2.72E-39 T 29-03-2018 IPR011057 Mss4-like CVS42_RS12990 3c3ff0f69c68035a420c047a12226f8f 215 Gene3D G3DSA:3.40.50.150 3 215 1.4E-18 T 29-03-2018 CVS42_RS12990 3c3ff0f69c68035a420c047a12226f8f 215 Pfam PF08241 Methyltransferase domain 61 160 5.7E-16 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CVS42_RS12990 3c3ff0f69c68035a420c047a12226f8f 215 SUPERFAMILY SSF53335 36 181 1.42E-23 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS09285 4ec7255d6cc5aa638901e218bc1be550 307 SUPERFAMILY SSF103481 42 142 1.12E-13 T 29-03-2018 CVS42_RS09285 4ec7255d6cc5aa638901e218bc1be550 307 SUPERFAMILY SSF103481 188 293 1.57E-15 T 29-03-2018 CVS42_RS09285 4ec7255d6cc5aa638901e218bc1be550 307 Pfam PF00892 EamA-like transporter family 151 288 7.4E-25 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS09285 4ec7255d6cc5aa638901e218bc1be550 307 Pfam PF00892 EamA-like transporter family 11 140 3.1E-20 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS03960 7754b78f7410317a77a037efc714c710 74 SUPERFAMILY SSF118001 1 70 1.18E-26 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CVS42_RS03960 7754b78f7410317a77a037efc714c710 74 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 1.4E-31 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CVS42_RS03960 7754b78f7410317a77a037efc714c710 74 PIRSF PIRSF006169 1 74 4.0E-32 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CVS42_RS03960 7754b78f7410317a77a037efc714c710 74 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 22.467 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CVS42_RS03960 7754b78f7410317a77a037efc714c710 74 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 68 5.0E-18 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CVS42_RS03960 7754b78f7410317a77a037efc714c710 74 Gene3D G3DSA:1.10.10.610 1 71 3.8E-31 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CVS42_RS11315 0d173483c4325b9fe55ffb94a58ebc4b 201 Gene3D G3DSA:1.10.260.40 1 73 2.3E-13 T 29-03-2018 CVS42_RS11315 0d173483c4325b9fe55ffb94a58ebc4b 201 SUPERFAMILY SSF51306 98 196 9.77E-7 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CVS42_RS11315 0d173483c4325b9fe55ffb94a58ebc4b 201 SMART SM00530 7 63 1.7E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS11315 0d173483c4325b9fe55ffb94a58ebc4b 201 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 7 60 1.7E-10 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS11315 0d173483c4325b9fe55ffb94a58ebc4b 201 SUPERFAMILY SSF47413 2 67 3.56E-11 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS20000 142b8523bd8f100e5c359e8cd3933a8d 134 Pfam PF11756 Nitrous oxide-stimulated promoter 25 126 6.6E-39 T 29-03-2018 IPR020483 Uncharacterised protein family YgbA CVS42_RS20000 142b8523bd8f100e5c359e8cd3933a8d 134 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 25 117 2.0E-22 T 29-03-2018 IPR020483 Uncharacterised protein family YgbA CVS42_RS08360 c95283ac43c9f55da182ae95ce30d56d 409 SUPERFAMILY SSF55073 254 403 3.84E-41 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS08360 c95283ac43c9f55da182ae95ce30d56d 409 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 403 1.2E-41 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS08360 c95283ac43c9f55da182ae95ce30d56d 409 Pfam PF17152 Periplasmic sensor domain 46 145 6.1E-26 T 29-03-2018 IPR033417 Periplasmic sensor domain CHASE8 CVS42_RS08360 c95283ac43c9f55da182ae95ce30d56d 409 SMART SM00267 238 407 1.1E-47 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS08360 c95283ac43c9f55da182ae95ce30d56d 409 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 247 405 3.3E-37 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS08360 c95283ac43c9f55da182ae95ce30d56d 409 Gene3D G3DSA:3.30.70.270 233 408 6.5E-55 T 29-03-2018 CVS42_RS09690 0243c3a8aa0bed8df857a64be638e6a9 139 Pfam PF05025 RbsD / FucU transport protein family 1 137 2.9E-43 T 29-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CVS42_RS09690 0243c3a8aa0bed8df857a64be638e6a9 139 SUPERFAMILY SSF102546 1 139 2.35E-40 T 29-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CVS42_RS09690 0243c3a8aa0bed8df857a64be638e6a9 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 31.238 T 29-03-2018 IPR023064 D-ribose pyranase GO:0016872 CVS42_RS09690 0243c3a8aa0bed8df857a64be638e6a9 139 Gene3D G3DSA:3.40.1650.10 3 139 7.2E-38 T 29-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CVS42_RS21290 84c60a0712517af7c86782a47948323f 211 SUPERFAMILY SSF52499 3 200 4.71E-32 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CVS42_RS21290 84c60a0712517af7c86782a47948323f 211 Gene3D G3DSA:3.40.50.850 2 207 4.5E-35 T 29-03-2018 CVS42_RS21290 84c60a0712517af7c86782a47948323f 211 Pfam PF00857 Isochorismatase family 5 200 2.8E-23 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CVS42_RS14290 dd6c20d2c8cbea282513855184eaa16c 242 PRINTS PR01837 MgtC/SapB protein signature 22 41 4.5E-41 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CVS42_RS14290 dd6c20d2c8cbea282513855184eaa16c 242 PRINTS PR01837 MgtC/SapB protein signature 98 122 4.5E-41 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CVS42_RS14290 dd6c20d2c8cbea282513855184eaa16c 242 PRINTS PR01837 MgtC/SapB protein signature 71 93 4.5E-41 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CVS42_RS14290 dd6c20d2c8cbea282513855184eaa16c 242 PRINTS PR01837 MgtC/SapB protein signature 41 59 4.5E-41 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CVS42_RS14290 dd6c20d2c8cbea282513855184eaa16c 242 Pfam PF02308 MgtC family 19 143 3.3E-35 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CVS42_RS01935 c33e73a54c0f69f9282b43b91a7e54b9 85 SUPERFAMILY SSF143880 2 75 1.57E-13 T 29-03-2018 IPR018841 Protein of unknown function DUF2442 CVS42_RS01935 c33e73a54c0f69f9282b43b91a7e54b9 85 Pfam PF10387 Protein of unknown function (DUF2442) 5 74 3.2E-8 T 29-03-2018 IPR018841 Protein of unknown function DUF2442 CVS42_RS01935 c33e73a54c0f69f9282b43b91a7e54b9 85 Gene3D G3DSA:3.30.2020.10 1 77 2.8E-12 T 29-03-2018 IPR018841 Protein of unknown function DUF2442 CVS42_RS09355 3dc5078faffa152a8b340d074f1c784a 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 2.0E-11 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CVS42_RS12335 16156e74d965024b29b0a21dbe9830c7 244 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 9.0E-11 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CVS42_RS12335 16156e74d965024b29b0a21dbe9830c7 244 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 126.207 T 29-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CVS42_RS12335 16156e74d965024b29b0a21dbe9830c7 244 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 227 1.4E-100 T 29-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CVS42_RS12335 16156e74d965024b29b0a21dbe9830c7 244 Gene3D G3DSA:3.60.21.10 1 233 1.2E-24 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS12335 16156e74d965024b29b0a21dbe9830c7 244 SUPERFAMILY SSF56300 1 219 1.58E-32 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CVS42_RS12845 b3b57ca6a6d3f6ff0fe76d02c2f2eebb 211 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 203 5.3E-64 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CVS42_RS12845 b3b57ca6a6d3f6ff0fe76d02c2f2eebb 211 Pfam PF01914 MarC family integral membrane protein 7 207 2.1E-61 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CVS42_RS20350 fe0e0b80ca9a374017b5187ce1a03d20 365 Pfam PF01699 Sodium/calcium exchanger protein 43 192 4.9E-18 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CVS42_RS20350 fe0e0b80ca9a374017b5187ce1a03d20 365 Pfam PF01699 Sodium/calcium exchanger protein 221 361 1.7E-9 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CVS42_RS05620 838ae0884362b82d5a3f464657cea1e5 163 SUPERFAMILY SSF82093 30 143 1.02E-38 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CVS42_RS05620 838ae0884362b82d5a3f464657cea1e5 163 Pfam PF03100 CcmE 4 138 5.7E-45 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CVS42_RS05620 838ae0884362b82d5a3f464657cea1e5 163 Gene3D G3DSA:2.40.50.140 27 132 1.7E-31 T 29-03-2018 CVS42_RS05620 838ae0884362b82d5a3f464657cea1e5 163 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 148 31.603 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CVS42_RS10710 e28309bd025665cd9d7c7589bbda231b 378 Pfam PF00534 Glycosyl transferases group 1 194 343 7.7E-11 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CVS42_RS10710 e28309bd025665cd9d7c7589bbda231b 378 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 127 134 - T 29-03-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CVS42_RS10710 e28309bd025665cd9d7c7589bbda231b 378 SUPERFAMILY SSF53756 12 366 4.71E-31 T 29-03-2018 CVS42_RS10710 e28309bd025665cd9d7c7589bbda231b 378 Gene3D G3DSA:3.40.50.2000 182 351 2.2E-20 T 29-03-2018 CVS42_RS21250 ea4f75193c991eda21b69f56521b9994 92 Pfam PF13710 ACT domain 23 81 1.3E-22 T 29-03-2018 CVS42_RS21250 ea4f75193c991eda21b69f56521b9994 92 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 14 81 3.0E-5 T 29-03-2018 CVS42_RS21250 ea4f75193c991eda21b69f56521b9994 92 Gene3D G3DSA:3.30.70.260 4 92 6.7E-10 T 29-03-2018 CVS42_RS21250 ea4f75193c991eda21b69f56521b9994 92 SUPERFAMILY SSF55021 13 82 3.12E-11 T 29-03-2018 CVS42_RS05580 6e4243f6d37cbbeee100e1e5c235081c 264 PIRSF PIRSF009320 107 228 1.9E-7 T 29-03-2018 CVS42_RS05580 6e4243f6d37cbbeee100e1e5c235081c 264 PIRSF PIRSF009320 1 112 6.3E-15 T 29-03-2018 CVS42_RS05580 6e4243f6d37cbbeee100e1e5c235081c 264 Pfam PF13614 AAA domain 5 179 2.3E-50 T 29-03-2018 IPR025669 AAA domain CVS42_RS05580 6e4243f6d37cbbeee100e1e5c235081c 264 Gene3D G3DSA:3.40.50.300 3 263 3.3E-52 T 29-03-2018 CVS42_RS05580 6e4243f6d37cbbeee100e1e5c235081c 264 SUPERFAMILY SSF52540 3 253 5.19E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11675 98fc92f89e908dad0091d448ec286546 162 Pfam PF02674 Colicin V production protein 4 142 4.8E-37 T 29-03-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CVS42_RS07355 9a822a0506a79ac75e32eaf36acaf45c 127 Pfam PF09842 Predicted membrane protein (DUF2069) 9 111 3.7E-35 T 29-03-2018 IPR018643 Protein of unknown function DUF2069, membrane CVS42_RS22135 78f5111105d1147ee04b444f391a3b2d 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 7.0E-36 T 29-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CVS42_RS22135 78f5111105d1147ee04b444f391a3b2d 156 SUPERFAMILY SSF81573 63 121 1.06E-14 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain CVS42_RS22135 78f5111105d1147ee04b444f391a3b2d 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.851 T 29-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CVS42_RS22135 78f5111105d1147ee04b444f391a3b2d 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.9E-55 T 29-03-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 CVS42_RS22135 78f5111105d1147ee04b444f391a3b2d 156 Gene3D G3DSA:1.20.5.620 62 122 2.4E-14 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain CVS42_RS20080 cb5c7acbc488d2cfb79381dc27790d02 77 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 14 77 3.0E-20 T 29-03-2018 IPR010035 ThiS, thiamine-biosynthesis CVS42_RS20080 cb5c7acbc488d2cfb79381dc27790d02 77 SUPERFAMILY SSF54285 12 77 3.63E-17 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CVS42_RS20080 cb5c7acbc488d2cfb79381dc27790d02 77 Pfam PF02597 ThiS family 14 77 1.2E-14 T 29-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CVS42_RS20080 cb5c7acbc488d2cfb79381dc27790d02 77 Gene3D G3DSA:3.10.20.30 13 77 1.7E-22 T 29-03-2018 IPR012675 Beta-grasp domain CVS42_RS03775 11a22d08afdf7ff9198840908fddc041 153 PIRSF PIRSF004923 1 152 3.5E-49 T 29-03-2018 IPR026268 Protein RseC CVS42_RS03775 11a22d08afdf7ff9198840908fddc041 153 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 141 1.8E-36 T 29-03-2018 IPR007359 Positive regulator of sigma(E), RseC/MucC CVS42_RS15800 38639a9292f23e3c76a7d008d1d72f94 426 Pfam PF13520 Amino acid permease 8 366 2.6E-40 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS15800 38639a9292f23e3c76a7d008d1d72f94 426 PIRSF PIRSF006060 1 412 2.3E-56 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS12630 808c666672f87c307c75b94ed2637fa2 420 Pfam PF07690 Major Facilitator Superfamily 33 351 1.3E-19 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS12630 808c666672f87c307c75b94ed2637fa2 420 SUPERFAMILY SSF103473 12 390 3.4E-40 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS12630 808c666672f87c307c75b94ed2637fa2 420 Gene3D G3DSA:1.20.1250.20 12 196 3.7E-11 T 29-03-2018 CVS42_RS12630 808c666672f87c307c75b94ed2637fa2 420 Gene3D G3DSA:1.20.1250.20 197 390 4.2E-21 T 29-03-2018 CVS42_RS01485 20ee5cc932086b2b850f546ab6a1d5a3 368 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 343 1.7E-115 T 29-03-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 CVS42_RS01485 20ee5cc932086b2b850f546ab6a1d5a3 368 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 343 1.7E-73 T 29-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CVS42_RS00270 e8ae5cc31e4cef2053355d529d0fe461 350 Gene3D G3DSA:3.40.50.2000 4 158 6.1E-34 T 29-03-2018 CVS42_RS00270 e8ae5cc31e4cef2053355d529d0fe461 350 Gene3D G3DSA:3.40.50.2000 161 348 4.6E-41 T 29-03-2018 CVS42_RS00270 e8ae5cc31e4cef2053355d529d0fe461 350 SUPERFAMILY SSF53756 10 345 2.51E-90 T 29-03-2018 CVS42_RS00270 e8ae5cc31e4cef2053355d529d0fe461 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 306 1.6E-54 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CVS42_RS18010 87bb8fa235607f85faecc17ad152032f 238 Pfam PF01048 Phosphorylase superfamily 16 217 3.2E-39 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CVS42_RS18010 87bb8fa235607f85faecc17ad152032f 238 SUPERFAMILY SSF53167 3 234 6.41E-95 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CVS42_RS18010 87bb8fa235607f85faecc17ad152032f 238 Gene3D G3DSA:3.40.50.1580 9 235 1.9E-56 T 29-03-2018 CVS42_RS18010 87bb8fa235607f85faecc17ad152032f 238 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.661 T 29-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CVS42_RS18010 87bb8fa235607f85faecc17ad152032f 238 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 29-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CVS42_RS18010 87bb8fa235607f85faecc17ad152032f 238 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 3.1E-123 T 29-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CVS42_RS15635 a9f33008920cce337fddc38a33d0a00a 56 Pfam PF01679 Proteolipid membrane potential modulator 4 51 2.3E-18 T 29-03-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 CVS42_RS00525 d145b5daed901bcfb8306a285107d8f3 170 SUPERFAMILY SSF51182 31 158 2.05E-21 T 29-03-2018 IPR011051 RmlC-like cupin domain CVS42_RS00525 d145b5daed901bcfb8306a285107d8f3 170 Pfam PF07883 Cupin domain 48 118 2.0E-17 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CVS42_RS00525 d145b5daed901bcfb8306a285107d8f3 170 Gene3D G3DSA:2.60.120.10 2 143 1.8E-18 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS18210 edbe2a3a1f779516dda6e5cb04a47953 107 Gene3D G3DSA:2.60.40.10 5 107 5.8E-13 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS18210 edbe2a3a1f779516dda6e5cb04a47953 107 SUPERFAMILY SSF81296 23 105 1.07E-10 T 29-03-2018 IPR014756 Immunoglobulin E-set CVS42_RS06325 68fc6a0c9e181641a52c2e30525d5e61 192 Gene3D G3DSA:3.40.50.10490 1 192 8.1E-42 T 29-03-2018 CVS42_RS06325 68fc6a0c9e181641a52c2e30525d5e61 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.827 T 29-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 CVS42_RS06325 68fc6a0c9e181641a52c2e30525d5e61 192 SUPERFAMILY SSF53697 1 189 7.89E-53 T 29-03-2018 CVS42_RS06325 68fc6a0c9e181641a52c2e30525d5e61 192 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 34 187 4.3E-82 T 29-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 CVS42_RS06325 68fc6a0c9e181641a52c2e30525d5e61 192 Pfam PF13580 SIS domain 23 146 6.8E-31 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CVS42_RS11135 c2dd1c71e27c15242ecaeca87c028e4d 186 Pfam PF10721 Protein of unknown function (DUF2514) 36 179 1.7E-36 T 29-03-2018 IPR019659 Protein of unknown function DUF2514 CVS42_RS18140 39acb4b656dc7eb8d52fa760e58be707 165 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 163 17.45 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CVS42_RS18140 39acb4b656dc7eb8d52fa760e58be707 165 ProSitePatterns PS00855 Signal peptidases II signature. 105 117 - T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CVS42_RS18140 39acb4b656dc7eb8d52fa760e58be707 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 4.3E-18 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CVS42_RS18140 39acb4b656dc7eb8d52fa760e58be707 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 102 117 4.3E-18 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CVS42_RS18140 39acb4b656dc7eb8d52fa760e58be707 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 138 154 4.3E-18 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CVS42_RS18140 39acb4b656dc7eb8d52fa760e58be707 165 Pfam PF01252 Signal peptidase (SPase) II 16 156 2.4E-39 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CVS42_RS18140 39acb4b656dc7eb8d52fa760e58be707 165 TIGRFAM TIGR00077 lspA: signal peptidase II 5 163 2.5E-48 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CVS42_RS14080 b0e2c8efe52e88b6d2ec6a2e75caf4f3 270 Pfam PF00672 HAMP domain 204 252 5.8E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS14080 b0e2c8efe52e88b6d2ec6a2e75caf4f3 270 SUPERFAMILY SSF158472 204 253 2.22E-6 T 29-03-2018 CVS42_RS14080 b0e2c8efe52e88b6d2ec6a2e75caf4f3 270 SMART SM00304 203 256 3.9E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS10645 b4b7359a49f387642e1d997d2c4e3f21 369 Gene3D G3DSA:3.40.50.300 328 369 5.0E-4 T 29-03-2018 CVS42_RS10645 b4b7359a49f387642e1d997d2c4e3f21 369 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 188 350 5.7E-38 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CVS42_RS10645 b4b7359a49f387642e1d997d2c4e3f21 369 SUPERFAMILY SSF52540 165 368 6.21E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS10645 b4b7359a49f387642e1d997d2c4e3f21 369 Gene3D G3DSA:3.40.50.300 186 327 3.9E-23 T 29-03-2018 CVS42_RS10645 b4b7359a49f387642e1d997d2c4e3f21 369 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 161 368 1.3E-91 T 29-03-2018 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 CVS42_RS09990 bf45afdf0cca6222fa5c93acd83f5a11 395 Gene3D G3DSA:3.40.1090.10 2 251 8.6E-38 T 29-03-2018 CVS42_RS09990 bf45afdf0cca6222fa5c93acd83f5a11 395 SUPERFAMILY SSF52151 3 79 1.02E-43 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CVS42_RS09990 bf45afdf0cca6222fa5c93acd83f5a11 395 SUPERFAMILY SSF52151 125 331 1.02E-43 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CVS42_RS09990 bf45afdf0cca6222fa5c93acd83f5a11 395 Pfam PF01734 Patatin-like phospholipase 7 219 6.4E-25 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CVS42_RS09115 dc8516c2e9ad0c83d93c98385cf16d5d 107 Pfam PF04269 Protein of unknown function, DUF440 4 103 4.9E-36 T 29-03-2018 IPR007376 dsDNA mimic, putative CVS42_RS09115 dc8516c2e9ad0c83d93c98385cf16d5d 107 SUPERFAMILY SSF102816 3 102 9.68E-24 T 29-03-2018 IPR007376 dsDNA mimic, putative CVS42_RS09115 dc8516c2e9ad0c83d93c98385cf16d5d 107 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 6 103 9.0E-16 T 29-03-2018 IPR007376 dsDNA mimic, putative CVS42_RS09115 dc8516c2e9ad0c83d93c98385cf16d5d 107 Gene3D G3DSA:3.10.450.140 5 102 5.6E-31 T 29-03-2018 IPR007376 dsDNA mimic, putative CVS42_RS14035 b9e7f0e8589d5f6c3e516d205a155a64 250 Gene3D G3DSA:3.40.190.10 130 243 1.8E-7 T 29-03-2018 CVS42_RS14035 b9e7f0e8589d5f6c3e516d205a155a64 250 SMART SM00062 20 243 0.0093 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS14035 b9e7f0e8589d5f6c3e516d205a155a64 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 239 6.0E-19 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS14035 b9e7f0e8589d5f6c3e516d205a155a64 250 Gene3D G3DSA:3.40.190.10 16 129 1.8E-12 T 29-03-2018 CVS42_RS14035 b9e7f0e8589d5f6c3e516d205a155a64 250 SUPERFAMILY SSF53850 17 239 3.26E-34 T 29-03-2018 CVS42_RS05075 51fa1ebdb1cf0e72749e8484e03fe355 304 Gene3D G3DSA:3.40.190.10 165 254 1.0E-8 T 29-03-2018 CVS42_RS05075 51fa1ebdb1cf0e72749e8484e03fe355 304 SUPERFAMILY SSF53850 94 291 3.44E-16 T 29-03-2018 CVS42_RS05075 51fa1ebdb1cf0e72749e8484e03fe355 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 5.6E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS05075 51fa1ebdb1cf0e72749e8484e03fe355 304 Gene3D G3DSA:1.10.10.10 1 87 6.3E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS05075 51fa1ebdb1cf0e72749e8484e03fe355 304 SUPERFAMILY SSF46785 8 91 9.68E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS05075 51fa1ebdb1cf0e72749e8484e03fe355 304 Pfam PF03466 LysR substrate binding domain 95 287 1.2E-13 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS17180 b55068bd6634e450360c2b75824f11da 331 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 324 37.051 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CVS42_RS17180 b55068bd6634e450360c2b75824f11da 331 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 320 3.1E-111 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CVS42_RS17180 b55068bd6634e450360c2b75824f11da 331 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 324 5.0E-132 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CVS42_RS17180 b55068bd6634e450360c2b75824f11da 331 Gene3D G3DSA:3.40.718.10 1 329 1.0E-134 T 29-03-2018 CVS42_RS17180 b55068bd6634e450360c2b75824f11da 331 SUPERFAMILY SSF53659 4 326 1.96E-117 T 29-03-2018 CVS42_RS07715 ab0e42c5cd0e0b06b6b785d1e6b0ef2e 494 SUPERFAMILY SSF53850 44 270 8.15E-40 T 29-03-2018 CVS42_RS07715 ab0e42c5cd0e0b06b6b785d1e6b0ef2e 494 Pfam PF01464 Transglycosylase SLT domain 299 406 5.6E-23 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CVS42_RS07715 ab0e42c5cd0e0b06b6b785d1e6b0ef2e 494 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 49 270 1.0E-39 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS07715 ab0e42c5cd0e0b06b6b785d1e6b0ef2e 494 Gene3D G3DSA:3.40.190.10 37 208 3.6E-30 T 29-03-2018 CVS42_RS07715 ab0e42c5cd0e0b06b6b785d1e6b0ef2e 494 SMART SM00062 48 271 5.5E-27 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS07715 ab0e42c5cd0e0b06b6b785d1e6b0ef2e 494 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 15 476 47.193 T 29-03-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 CVS42_RS07715 ab0e42c5cd0e0b06b6b785d1e6b0ef2e 494 SUPERFAMILY SSF53955 435 452 2.41E-36 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS07715 ab0e42c5cd0e0b06b6b785d1e6b0ef2e 494 SUPERFAMILY SSF53955 248 400 2.41E-36 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS07715 ab0e42c5cd0e0b06b6b785d1e6b0ef2e 494 Gene3D G3DSA:1.10.530.10 275 453 1.3E-34 T 29-03-2018 CVS42_RS07715 ab0e42c5cd0e0b06b6b785d1e6b0ef2e 494 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 312 340 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CVS42_RS20190 859c7fe9ac60049b6094ab2d28305dac 240 Pfam PF01914 MarC family integral membrane protein 4 204 4.2E-46 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CVS42_RS20190 859c7fe9ac60049b6094ab2d28305dac 240 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 201 6.8E-31 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CVS42_RS08340 f946f537dc05161f13f7617627e6e114 112 SUPERFAMILY SSF55248 16 110 3.14E-33 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CVS42_RS08340 f946f537dc05161f13f7617627e6e114 112 Gene3D G3DSA:3.30.1360.20 10 112 3.5E-30 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CVS42_RS08340 f946f537dc05161f13f7617627e6e114 112 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 18 110 1.6E-31 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CVS42_RS08340 f946f537dc05161f13f7617627e6e114 112 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 16 111 22.697 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CVS42_RS18160 26c73c0ec19bd1163976174771b549a1 87 SUPERFAMILY SSF46992 3 86 3.53E-32 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS18160 26c73c0ec19bd1163976174771b549a1 87 Gene3D G3DSA:1.20.58.110 1 87 8.9E-30 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS18160 26c73c0ec19bd1163976174771b549a1 87 Pfam PF01649 Ribosomal protein S20 2 84 3.9E-28 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS18160 26c73c0ec19bd1163976174771b549a1 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 2.6E-30 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS18160 26c73c0ec19bd1163976174771b549a1 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.874 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS18160 26c73c0ec19bd1163976174771b549a1 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 87 4.0E-21 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS00820 b33e2853ccaf939ce9908381d4be0f3e 234 Pfam PF03473 MOSC domain 44 162 1.8E-19 T 29-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CVS42_RS00820 b33e2853ccaf939ce9908381d4be0f3e 234 Pfam PF03475 3-alpha domain 174 216 3.4E-10 T 29-03-2018 IPR005163 3-alpha domain CVS42_RS00820 b33e2853ccaf939ce9908381d4be0f3e 234 SUPERFAMILY SSF50800 4 228 8.37E-67 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CVS42_RS00820 b33e2853ccaf939ce9908381d4be0f3e 234 Gene3D G3DSA:2.40.33.20 2 233 1.5E-47 T 29-03-2018 CVS42_RS15615 527b5800973941ffcdaaf8c546166d14 330 Pfam PF11168 Protein of unknown function (DUF2955) 3 142 3.2E-52 T 29-03-2018 IPR022604 Protein of unknown function DUF2955 CVS42_RS15615 527b5800973941ffcdaaf8c546166d14 330 Pfam PF13515 Fusaric acid resistance protein-like 179 311 3.3E-7 T 29-03-2018 CVS42_RS15615 527b5800973941ffcdaaf8c546166d14 330 PIRSF PIRSF029594 1 330 1.6E-142 T 29-03-2018 IPR016926 Uncharacterised conserved protein UCP029594 CVS42_RS07870 385e7869b476c83f3e50f105f9f594a6 226 SUPERFAMILY SSF52540 1 223 5.7E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS07870 385e7869b476c83f3e50f105f9f594a6 226 Gene3D G3DSA:3.40.50.300 1 225 3.6E-61 T 29-03-2018 CVS42_RS07870 385e7869b476c83f3e50f105f9f594a6 226 SMART SM00382 30 224 1.6E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS07870 385e7869b476c83f3e50f105f9f594a6 226 Pfam PF00005 ABC transporter 22 167 1.1E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS07870 385e7869b476c83f3e50f105f9f594a6 226 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS21205 0d470948f1bd66de1927081f5ca2f3c8 188 Gene3D G3DSA:1.10.10.60 2 49 4.4E-19 T 29-03-2018 CVS42_RS21205 0d470948f1bd66de1927081f5ca2f3c8 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.4E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS21205 0d470948f1bd66de1927081f5ca2f3c8 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.4E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS21205 0d470948f1bd66de1927081f5ca2f3c8 188 Gene3D G3DSA:1.10.357.10 50 176 3.9E-24 T 29-03-2018 CVS42_RS21205 0d470948f1bd66de1927081f5ca2f3c8 188 SUPERFAMILY SSF48498 76 175 1.72E-16 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CVS42_RS21205 0d470948f1bd66de1927081f5ca2f3c8 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 2.1E-16 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS21205 0d470948f1bd66de1927081f5ca2f3c8 188 SUPERFAMILY SSF46689 3 80 5.64E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS16975 360bab89fe29b901601601abce90d929 203 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 20 191 5.9E-32 T 29-03-2018 IPR003740 Uncharacterised membrane protein YitT CVS42_RS17845 1f51aa87735ecc393d801b189cf3d538 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 182 0.0093 T 29-03-2018 CVS42_RS17845 1f51aa87735ecc393d801b189cf3d538 240 SUPERFAMILY SSF51735 5 239 5.21E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS17845 1f51aa87735ecc393d801b189cf3d538 240 Gene3D G3DSA:3.40.50.720 3 240 2.9E-48 T 29-03-2018 CVS42_RS17845 1f51aa87735ecc393d801b189cf3d538 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 8.8E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS17845 1f51aa87735ecc393d801b189cf3d538 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 8.8E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS17845 1f51aa87735ecc393d801b189cf3d538 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 8.8E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS17845 1f51aa87735ecc393d801b189cf3d538 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 8.8E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS17845 1f51aa87735ecc393d801b189cf3d538 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 8.8E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS17845 1f51aa87735ecc393d801b189cf3d538 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 8.8E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS17845 1f51aa87735ecc393d801b189cf3d538 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 236 2.6E-35 T 29-03-2018 CVS42_RS18420 8e2c038e61b585edec94b9cb18b86885 245 Gene3D G3DSA:3.40.190.10 14 115 4.8E-6 T 29-03-2018 CVS42_RS18420 8e2c038e61b585edec94b9cb18b86885 245 SUPERFAMILY SSF53850 20 237 4.34E-25 T 29-03-2018 CVS42_RS18420 8e2c038e61b585edec94b9cb18b86885 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 236 2.5E-10 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS18420 8e2c038e61b585edec94b9cb18b86885 245 Gene3D G3DSA:3.40.190.10 116 241 4.6E-8 T 29-03-2018 CVS42_RS00715 ee8d4b9ebd5d6e4604a85b2065b5abfd 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 325 4.2E-47 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CVS42_RS00715 ee8d4b9ebd5d6e4604a85b2065b5abfd 336 Gene3D G3DSA:1.10.3470.10 34 331 2.3E-30 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CVS42_RS09765 2d3541a7c9ab87f9c8cc47634a6471d1 62 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 2.6E-19 T 29-03-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type CVS42_RS09765 2d3541a7c9ab87f9c8cc47634a6471d1 62 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 46 2.3E-15 T 29-03-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type CVS42_RS21160 db6aad2cd1ca03dee732332aea9b0d0f 498 Gene3D G3DSA:3.40.605.10 1 263 2.3E-85 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS21160 db6aad2cd1ca03dee732332aea9b0d0f 498 SUPERFAMILY SSF53720 2 484 1.83E-146 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CVS42_RS21160 db6aad2cd1ca03dee732332aea9b0d0f 498 Gene3D G3DSA:3.40.309.10 264 460 2.4E-62 T 29-03-2018 CVS42_RS21160 db6aad2cd1ca03dee732332aea9b0d0f 498 Pfam PF00171 Aldehyde dehydrogenase family 18 478 3.9E-139 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS21160 db6aad2cd1ca03dee732332aea9b0d0f 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CVS42_RS21160 db6aad2cd1ca03dee732332aea9b0d0f 498 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 482 3.3E-205 T 29-03-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 CVS42_RS21210 c0c54f4a427b6e9563250491ca70fe2c 150 Pfam PF04982 HPP family 33 146 4.0E-30 T 29-03-2018 IPR007065 HPP CVS42_RS16305 e5d11d227ab1a78d6c71d8173e88733b 179 Pfam PF12915 Protein of unknown function (DUF3833) 16 177 3.2E-62 T 29-03-2018 IPR024409 Protein of unknown function DUF3833 CVS42_RS11955 fd5166719a5edf612e2ea053f43444a0 340 SUPERFAMILY SSF103039 144 336 2.62E-43 T 29-03-2018 IPR028976 CheC-like domain CVS42_RS11955 fd5166719a5edf612e2ea053f43444a0 340 SMART SM00448 1 113 1.2E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS11955 fd5166719a5edf612e2ea053f43444a0 340 SUPERFAMILY SSF52172 1 116 7.68E-27 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS11955 fd5166719a5edf612e2ea053f43444a0 340 Gene3D G3DSA:3.40.1550.10 142 339 7.0E-35 T 29-03-2018 IPR028976 CheC-like domain CVS42_RS11955 fd5166719a5edf612e2ea053f43444a0 340 Gene3D G3DSA:3.40.50.2300 1 129 6.9E-25 T 29-03-2018 CVS42_RS11955 fd5166719a5edf612e2ea053f43444a0 340 Pfam PF00072 Response regulator receiver domain 3 113 1.6E-20 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS15870 0f0916f770384b2e1482919276e3cae6 421 SUPERFAMILY SSF55298 8 137 4.08E-38 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CVS42_RS15870 0f0916f770384b2e1482919276e3cae6 421 Pfam PF01042 Endoribonuclease L-PSP 14 128 3.5E-26 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CVS42_RS15870 0f0916f770384b2e1482919276e3cae6 421 Pfam PF01042 Endoribonuclease L-PSP 314 411 5.7E-23 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CVS42_RS15870 0f0916f770384b2e1482919276e3cae6 421 Pfam PF01042 Endoribonuclease L-PSP 173 272 2.9E-22 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CVS42_RS15870 0f0916f770384b2e1482919276e3cae6 421 SUPERFAMILY SSF55298 291 415 1.88E-32 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CVS42_RS15870 0f0916f770384b2e1482919276e3cae6 421 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 11 129 7.5E-33 T 29-03-2018 IPR006056 RidA family CVS42_RS15870 0f0916f770384b2e1482919276e3cae6 421 SUPERFAMILY SSF55298 145 280 8.33E-30 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CVS42_RS15870 0f0916f770384b2e1482919276e3cae6 421 Gene3D G3DSA:3.30.1330.40 148 289 2.0E-26 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CVS42_RS15870 0f0916f770384b2e1482919276e3cae6 421 Gene3D G3DSA:3.30.1330.40 292 420 5.3E-29 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CVS42_RS15870 0f0916f770384b2e1482919276e3cae6 421 Gene3D G3DSA:3.30.1330.40 6 137 5.5E-34 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CVS42_RS18720 802948e920df48c2e912406c9c09a0e6 128 SUPERFAMILY SSF54523 7 119 4.71E-22 T 29-03-2018 CVS42_RS18720 802948e920df48c2e912406c9c09a0e6 128 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.7E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS18720 802948e920df48c2e912406c9c09a0e6 128 Gene3D G3DSA:3.30.700.10 7 125 2.2E-26 T 29-03-2018 CVS42_RS18720 802948e920df48c2e912406c9c09a0e6 128 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 4.8E-11 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS18720 802948e920df48c2e912406c9c09a0e6 128 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS03390 4e7c0130a4692bc42049d2b1afc8eafd 196 Pfam PF01810 LysE type translocator 19 185 2.2E-18 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CVS42_RS03905 46df1adf78580c35d76adfcf6b1e9f85 150 SUPERFAMILY SSF75217 7 143 1.2E-25 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CVS42_RS03905 46df1adf78580c35d76adfcf6b1e9f85 150 Pfam PF00588 SpoU rRNA Methylase family 9 140 1.2E-17 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CVS42_RS03905 46df1adf78580c35d76adfcf6b1e9f85 150 Gene3D G3DSA:3.40.1280.10 2 149 7.1E-27 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CVS42_RS10845 9226a09166a586d56a8347e3e47c22ff 262 Pfam PF01925 Sulfite exporter TauE/SafE 7 257 1.5E-52 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CVS42_RS01905 5e2b9a70fe080e0ce9972c99746c3567 382 PIRSF PIRSF006728 289 369 6.2 T 29-03-2018 IPR008135 Competence-induced protein CinA CVS42_RS01905 5e2b9a70fe080e0ce9972c99746c3567 382 PIRSF PIRSF006728 1 299 1.8E-85 T 29-03-2018 IPR008135 Competence-induced protein CinA CVS42_RS01905 5e2b9a70fe080e0ce9972c99746c3567 382 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 281 6.0E-75 T 29-03-2018 IPR008135 Competence-induced protein CinA CVS42_RS01905 5e2b9a70fe080e0ce9972c99746c3567 382 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 382 93.446 T 29-03-2018 IPR008135 Competence-induced protein CinA CVS42_RS01905 5e2b9a70fe080e0ce9972c99746c3567 382 SUPERFAMILY SSF53218 1 202 2.36E-39 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS01905 5e2b9a70fe080e0ce9972c99746c3567 382 Gene3D G3DSA:3.40.980.10 1 171 4.8E-44 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS01905 5e2b9a70fe080e0ce9972c99746c3567 382 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 164 4.8E-28 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS01905 5e2b9a70fe080e0ce9972c99746c3567 382 SMART SM00852 4 171 2.4E-38 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS01905 5e2b9a70fe080e0ce9972c99746c3567 382 Pfam PF00994 Probable molybdopterin binding domain 4 169 1.8E-34 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS02780 a419e74ced5319cd976642163f9646f4 212 PRINTS PR01549 Autoinducer synthesis protein signature 62 80 2.7E-23 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CVS42_RS02780 a419e74ced5319cd976642163f9646f4 212 PRINTS PR01549 Autoinducer synthesis protein signature 142 163 2.7E-23 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CVS42_RS02780 a419e74ced5319cd976642163f9646f4 212 PRINTS PR01549 Autoinducer synthesis protein signature 120 141 2.7E-23 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CVS42_RS02780 a419e74ced5319cd976642163f9646f4 212 PRINTS PR01549 Autoinducer synthesis protein signature 39 61 2.7E-23 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CVS42_RS02780 a419e74ced5319cd976642163f9646f4 212 PRINTS PR01549 Autoinducer synthesis protein signature 95 107 2.7E-23 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CVS42_RS02780 a419e74ced5319cd976642163f9646f4 212 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 2.7E-23 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CVS42_RS02780 a419e74ced5319cd976642163f9646f4 212 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 48 - T 29-03-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CVS42_RS02780 a419e74ced5319cd976642163f9646f4 212 SUPERFAMILY SSF55729 9 201 7.54E-37 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS02780 a419e74ced5319cd976642163f9646f4 212 Gene3D G3DSA:3.40.630.30 1 210 1.9E-31 T 29-03-2018 CVS42_RS02780 a419e74ced5319cd976642163f9646f4 212 Pfam PF00765 Autoinducer synthase 14 168 6.2E-28 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CVS42_RS14485 571e76f585ca87720c540389b24d0bc3 207 Gene3D G3DSA:3.30.70.60 52 204 5.8E-5 T 29-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CVS42_RS07645 db614138554784b8e75b5a3354042f7e 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 91 2.5E-14 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CVS42_RS07645 db614138554784b8e75b5a3354042f7e 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 1.8E-56 T 29-03-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 CVS42_RS07645 db614138554784b8e75b5a3354042f7e 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 29-03-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CVS42_RS07645 db614138554784b8e75b5a3354042f7e 112 SUPERFAMILY SSF54292 5 104 9.99E-33 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CVS42_RS07645 db614138554784b8e75b5a3354042f7e 112 PRINTS PR00355 Adrenodoxin signature 42 52 5.9E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CVS42_RS07645 db614138554784b8e75b5a3354042f7e 112 PRINTS PR00355 Adrenodoxin signature 60 74 5.9E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CVS42_RS07645 db614138554784b8e75b5a3354042f7e 112 PRINTS PR00355 Adrenodoxin signature 83 91 5.9E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CVS42_RS07645 db614138554784b8e75b5a3354042f7e 112 Gene3D G3DSA:3.10.20.30 11 112 1.1E-31 T 29-03-2018 IPR012675 Beta-grasp domain CVS42_RS01495 6ee151d6a47bf03c5621de70fadeef29 208 Pfam PF06271 RDD family 53 190 1.3E-16 T 29-03-2018 IPR010432 RDD CVS42_RS17605 436ecfa6dfd460e8fe815f73d562bb05 715 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 24 659 2.7E-173 T 29-03-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CVS42_RS17605 436ecfa6dfd460e8fe815f73d562bb05 715 Gene3D G3DSA:3.20.70.20 6 657 2.9E-148 T 29-03-2018 CVS42_RS17605 436ecfa6dfd460e8fe815f73d562bb05 715 Pfam PF02867 Ribonucleotide reductase, barrel domain 101 651 3.3E-140 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS17605 436ecfa6dfd460e8fe815f73d562bb05 715 PRINTS PR01183 Ribonucleotide reductase large chain signature 355 378 1.2E-15 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS17605 436ecfa6dfd460e8fe815f73d562bb05 715 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 538 1.2E-15 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS17605 436ecfa6dfd460e8fe815f73d562bb05 715 PRINTS PR01183 Ribonucleotide reductase large chain signature 393 415 1.2E-15 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS17605 436ecfa6dfd460e8fe815f73d562bb05 715 PRINTS PR01183 Ribonucleotide reductase large chain signature 176 195 1.2E-15 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS17605 436ecfa6dfd460e8fe815f73d562bb05 715 PRINTS PR01183 Ribonucleotide reductase large chain signature 317 328 1.2E-15 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS17605 436ecfa6dfd460e8fe815f73d562bb05 715 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 22 89 4.7E-6 T 29-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CVS42_RS17605 436ecfa6dfd460e8fe815f73d562bb05 715 SUPERFAMILY SSF51998 509 691 7.02E-170 T 29-03-2018 CVS42_RS17605 436ecfa6dfd460e8fe815f73d562bb05 715 SUPERFAMILY SSF51998 13 218 7.02E-170 T 29-03-2018 CVS42_RS17605 436ecfa6dfd460e8fe815f73d562bb05 715 SUPERFAMILY SSF51998 283 441 7.02E-170 T 29-03-2018 CVS42_RS20020 870d8e155437ef3467424125864f234b 307 SUPERFAMILY SSF55073 154 299 8.63E-39 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS20020 870d8e155437ef3467424125864f234b 307 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 145 297 3.5E-35 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS20020 870d8e155437ef3467424125864f234b 307 SMART SM00267 138 300 1.4E-54 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS20020 870d8e155437ef3467424125864f234b 307 Pfam PF00990 Diguanylate cyclase, GGDEF domain 149 295 4.7E-37 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS20020 870d8e155437ef3467424125864f234b 307 Gene3D G3DSA:3.30.70.270 143 307 2.7E-45 T 29-03-2018 CVS42_RS07335 fae8f636db2c090e35680e479571a23b 77 Pfam PF01206 Sulfurtransferase TusA 3 65 8.3E-16 T 29-03-2018 IPR001455 TusA-like domain CVS42_RS07335 fae8f636db2c090e35680e479571a23b 77 SUPERFAMILY SSF64307 1 65 6.41E-16 T 29-03-2018 IPR001455 TusA-like domain CVS42_RS07335 fae8f636db2c090e35680e479571a23b 77 Gene3D G3DSA:3.30.110.40 1 70 3.4E-17 T 29-03-2018 IPR001455 TusA-like domain CVS42_RS18270 52e87b769d59de733e01408ae3c6cd47 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 214 5.0E-11 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS18270 52e87b769d59de733e01408ae3c6cd47 220 Gene3D G3DSA:1.10.3720.10 4 219 8.1E-29 T 29-03-2018 CVS42_RS18270 52e87b769d59de733e01408ae3c6cd47 220 SUPERFAMILY SSF161098 8 201 1.57E-27 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS18270 52e87b769d59de733e01408ae3c6cd47 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 110 3.6E-14 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CVS42_RS18880 aa8c1dc2a1180bb30a8c83d6d181af2a 386 Pfam PF02120 Flagellar hook-length control protein FliK 269 352 1.2E-18 T 29-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal CVS42_RS05150 4121d258990599e6473c0e470957198e 118 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 15 91 1.1E-17 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CVS42_RS05150 4121d258990599e6473c0e470957198e 118 SUPERFAMILY SSF46767 14 92 1.96E-17 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CVS42_RS05150 4121d258990599e6473c0e470957198e 118 Gene3D G3DSA:1.10.10.10 11 114 1.5E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS18615 80b6b8b77f39c16f05cc3b716fa2be9d 196 Pfam PF12464 Maltose acetyltransferase 8 57 3.9E-6 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CVS42_RS18615 80b6b8b77f39c16f05cc3b716fa2be9d 196 SUPERFAMILY SSF51161 17 190 4.71E-49 T 29-03-2018 IPR011004 Trimeric LpxA-like CVS42_RS18615 80b6b8b77f39c16f05cc3b716fa2be9d 196 SMART SM01266 5 59 4.3E-8 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CVS42_RS18615 80b6b8b77f39c16f05cc3b716fa2be9d 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 165 2.9E-11 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS18615 80b6b8b77f39c16f05cc3b716fa2be9d 196 Gene3D G3DSA:2.160.10.10 11 193 1.2E-49 T 29-03-2018 CVS42_RS18615 80b6b8b77f39c16f05cc3b716fa2be9d 196 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CVS42_RS09220 6fbc7a8390c06a9c719b960bfd4da1f7 156 SUPERFAMILY SSF55729 26 139 3.87E-21 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS09220 6fbc7a8390c06a9c719b960bfd4da1f7 156 Pfam PF00583 Acetyltransferase (GNAT) family 37 130 2.6E-12 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS09220 6fbc7a8390c06a9c719b960bfd4da1f7 156 Gene3D G3DSA:3.40.630.30 3 146 8.5E-19 T 29-03-2018 CVS42_RS13560 5081d1d1c2133ac6b924dd8eca2d8648 667 SUPERFAMILY SSF64518 449 666 5.89E-20 T 29-03-2018 CVS42_RS13560 5081d1d1c2133ac6b924dd8eca2d8648 667 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 1.7E-8 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CVS42_RS13560 5081d1d1c2133ac6b924dd8eca2d8648 667 PRINTS PR01005 Flagellar hook-associated protein signature 149 173 1.7E-8 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CVS42_RS13560 5081d1d1c2133ac6b924dd8eca2d8648 667 PRINTS PR01005 Flagellar hook-associated protein signature 404 421 1.7E-8 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CVS42_RS13560 5081d1d1c2133ac6b924dd8eca2d8648 667 PRINTS PR01005 Flagellar hook-associated protein signature 207 225 1.7E-8 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CVS42_RS13560 5081d1d1c2133ac6b924dd8eca2d8648 667 PRINTS PR01005 Flagellar hook-associated protein signature 116 136 1.7E-8 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CVS42_RS13560 5081d1d1c2133ac6b924dd8eca2d8648 667 Gene3D G3DSA:1.20.1170.10 16 310 0.0015 T 29-03-2018 CVS42_RS13560 5081d1d1c2133ac6b924dd8eca2d8648 667 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 609 664 7.6E-9 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CVS42_RS13560 5081d1d1c2133ac6b924dd8eca2d8648 667 SUPERFAMILY SSF64518 127 430 9.68E-20 T 29-03-2018 CVS42_RS13560 5081d1d1c2133ac6b924dd8eca2d8648 667 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 309 7.0E-51 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CVS42_RS02395 3c08836ef26cdd09d8acbe9ddd64665f 367 SUPERFAMILY SSF53955 156 356 5.35E-38 T 29-03-2018 IPR023346 Lysozyme-like domain CVS42_RS02395 3c08836ef26cdd09d8acbe9ddd64665f 367 Pfam PF01464 Transglycosylase SLT domain 197 318 5.8E-30 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CVS42_RS02395 3c08836ef26cdd09d8acbe9ddd64665f 367 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 214 242 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CVS42_RS02395 3c08836ef26cdd09d8acbe9ddd64665f 367 Gene3D G3DSA:1.10.530.10 176 359 8.1E-36 T 29-03-2018 CVS42_RS02395 3c08836ef26cdd09d8acbe9ddd64665f 367 Pfam PF11873 Domain of unknown function (DUF3393) 4 192 7.0E-66 T 29-03-2018 IPR024570 Murein transglycosylase-C, N-terminal CVS42_RS05290 5dc2c57b1e872db9bbe2ecf1dd68a7c1 233 SUPERFAMILY SSF161098 9 222 1.28E-29 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS05290 5dc2c57b1e872db9bbe2ecf1dd68a7c1 233 Gene3D G3DSA:1.10.3720.10 2 229 6.1E-20 T 29-03-2018 CVS42_RS05290 5dc2c57b1e872db9bbe2ecf1dd68a7c1 233 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 221 9.4E-7 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS21465 509e10dc035e9c353f392cf56dd852c4 130 Hamap MF_01196 Cell division protein ZapB [zapB]. 62 126 17.497 T 29-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 CVS42_RS21465 509e10dc035e9c353f392cf56dd852c4 130 Gene3D G3DSA:1.20.5.370 74 128 1.2E-16 T 29-03-2018 CVS42_RS21465 509e10dc035e9c353f392cf56dd852c4 130 Pfam PF06005 Cell division protein ZapB 62 125 2.0E-22 T 29-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 CVS42_RS10300 2d38589aa2fd64a919c9c2e8039a2975 423 SUPERFAMILY SSF53300 252 419 2.43E-5 T 29-03-2018 IPR002035 von Willebrand factor, type A CVS42_RS10300 2d38589aa2fd64a919c9c2e8039a2975 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 1.2E-188 T 29-03-2018 IPR006698 Uncharacterised protein family UPF0229 CVS42_RS10300 2d38589aa2fd64a919c9c2e8039a2975 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.14 T 29-03-2018 IPR006698 Uncharacterised protein family UPF0229 CVS42_RS01750 3c20e8fa0ed1b8f543472a1ab82c4f12 528 Pfam PF12792 CSS motif domain associated with EAL 43 231 1.8E-30 T 29-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CVS42_RS01750 3c20e8fa0ed1b8f543472a1ab82c4f12 528 Gene3D G3DSA:3.20.20.450 260 514 1.0E-79 T 29-03-2018 IPR001633 EAL domain CVS42_RS01750 3c20e8fa0ed1b8f543472a1ab82c4f12 528 SMART SM00052 257 503 1.1E-98 T 29-03-2018 IPR001633 EAL domain CVS42_RS01750 3c20e8fa0ed1b8f543472a1ab82c4f12 528 SUPERFAMILY SSF141868 263 508 2.35E-74 T 29-03-2018 IPR001633 EAL domain CVS42_RS01750 3c20e8fa0ed1b8f543472a1ab82c4f12 528 Pfam PF00563 EAL domain 264 498 2.8E-64 T 29-03-2018 IPR001633 EAL domain CVS42_RS01315 a4fb556111827279880607310ac2fe13 208 SUPERFAMILY SSF56925 23 208 1.54E-25 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS01315 a4fb556111827279880607310ac2fe13 208 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 140 208 9.1E-5 T 29-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CVS42_RS01315 a4fb556111827279880607310ac2fe13 208 Pfam PF13505 Outer membrane protein beta-barrel domain 9 208 5.5E-23 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel CVS42_RS01315 a4fb556111827279880607310ac2fe13 208 Gene3D G3DSA:2.40.160.20 8 208 2.3E-26 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS01580 a451bddaac0b023a6ab785c51e0da286 151 Pfam PF10772 Protein of unknown function (DUF2597) 9 141 2.3E-60 T 29-03-2018 IPR019708 Bacteriophage HP1, Orf24 CVS42_RS13970 dc0d865059e359e6327e3d6649a8583a 473 Pfam PF02554 Carbon starvation protein CstA 4 144 9.5E-33 T 29-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CVS42_RS13970 dc0d865059e359e6327e3d6649a8583a 473 Pfam PF02554 Carbon starvation protein CstA 151 279 9.8E-19 T 29-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CVS42_RS13970 dc0d865059e359e6327e3d6649a8583a 473 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 317 427 3.9E-23 T 29-03-2018 IPR025299 CstA, C-terminal domain CVS42_RS08230 69c8ff9e49eeb8f3f70c2dc928a1e988 95 Pfam PF05488 PAAR motif 20 87 2.3E-15 T 29-03-2018 IPR008727 PAAR motif CVS42_RS12680 978d8824c9b68a0ea0357dc5eb5529f8 210 SMART SM00900 101 193 2.5E-37 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CVS42_RS12680 978d8824c9b68a0ea0357dc5eb5529f8 210 Pfam PF04205 FMN-binding domain 101 190 3.9E-21 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CVS42_RS12680 978d8824c9b68a0ea0357dc5eb5529f8 210 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 195 25.908 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CVS42_RS12680 978d8824c9b68a0ea0357dc5eb5529f8 210 PIRSF PIRSF006091 1 205 5.0E-77 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CVS42_RS12680 978d8824c9b68a0ea0357dc5eb5529f8 210 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 194 3.1E-64 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CVS42_RS03355 c2a9b8afbcd637587cdcef17b0ab1f33 147 Pfam PF09523 Protein of unknown function (DUF2390) 17 111 7.0E-15 T 29-03-2018 IPR012659 Conserved hypothetical protein CHP02444 CVS42_RS14255 906fb9aa74031cdf4305e07ca2c837d8 345 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 267 2.8E-16 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CVS42_RS14255 906fb9aa74031cdf4305e07ca2c837d8 345 Gene3D G3DSA:1.10.287.470 113 159 1.8E-8 T 29-03-2018 CVS42_RS14255 906fb9aa74031cdf4305e07ca2c837d8 345 Gene3D G3DSA:2.40.50.100 160 292 2.6E-8 T 29-03-2018 CVS42_RS14255 906fb9aa74031cdf4305e07ca2c837d8 345 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 330 1.3E-58 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CVS42_RS14255 906fb9aa74031cdf4305e07ca2c837d8 345 Gene3D G3DSA:2.40.50.100 55 112 5.2E-15 T 29-03-2018 CVS42_RS14255 906fb9aa74031cdf4305e07ca2c837d8 345 SUPERFAMILY SSF111369 45 275 5.36E-27 T 29-03-2018 CVS42_RS08815 cb492dfef22728719ce89dbf8140aa73 239 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 4 226 4.0E-34 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS08815 cb492dfef22728719ce89dbf8140aa73 239 SUPERFAMILY SSF53850 1 226 8.54E-44 T 29-03-2018 CVS42_RS08815 cb492dfef22728719ce89dbf8140aa73 239 Gene3D G3DSA:3.40.190.10 1 122 1.1E-21 T 29-03-2018 CVS42_RS08815 cb492dfef22728719ce89dbf8140aa73 239 SMART SM00062 8 230 7.6E-21 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS08815 cb492dfef22728719ce89dbf8140aa73 239 Gene3D G3DSA:3.40.190.10 123 238 1.2E-9 T 29-03-2018 CVS42_RS17775 1d3f5147cac57446a8b9a41235396dad 151 Pfam PF13411 MerR HTH family regulatory protein 2 69 2.3E-20 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS17775 1d3f5147cac57446a8b9a41235396dad 151 Gene3D G3DSA:1.10.1660.10 58 141 3.3E-23 T 29-03-2018 CVS42_RS17775 1d3f5147cac57446a8b9a41235396dad 151 SMART SM00422 2 71 1.9E-32 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS17775 1d3f5147cac57446a8b9a41235396dad 151 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS17775 1d3f5147cac57446a8b9a41235396dad 151 Gene3D G3DSA:1.10.1660.10 1 57 1.8E-23 T 29-03-2018 CVS42_RS17775 1d3f5147cac57446a8b9a41235396dad 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.7E-12 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS17775 1d3f5147cac57446a8b9a41235396dad 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.7E-12 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS17775 1d3f5147cac57446a8b9a41235396dad 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.7E-12 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CVS42_RS17775 1d3f5147cac57446a8b9a41235396dad 151 SUPERFAMILY SSF46955 2 118 7.33E-35 T 29-03-2018 IPR009061 Putative DNA-binding domain CVS42_RS17775 1d3f5147cac57446a8b9a41235396dad 151 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 3.2E-57 T 29-03-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 CVS42_RS03740 c9ab774863d6e584c0cf879a73d43761 300 PIRSF PIRSF006487 145 258 4.6 T 29-03-2018 CVS42_RS03740 c9ab774863d6e584c0cf879a73d43761 300 PIRSF PIRSF006487 11 141 3.4E-8 T 29-03-2018 CVS42_RS03740 c9ab774863d6e584c0cf879a73d43761 300 Gene3D G3DSA:3.30.70.1400 18 214 3.0E-25 T 29-03-2018 CVS42_RS03740 c9ab774863d6e584c0cf879a73d43761 300 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 163 226 4.1E-25 T 29-03-2018 IPR017703 YgfZ/GcvT conserved site CVS42_RS03740 c9ab774863d6e584c0cf879a73d43761 300 SUPERFAMILY SSF103025 11 216 8.32E-51 T 29-03-2018 CVS42_RS03740 c9ab774863d6e584c0cf879a73d43761 300 SUPERFAMILY SSF101790 218 298 2.94E-23 T 29-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CVS42_RS03740 c9ab774863d6e584c0cf879a73d43761 300 Pfam PF01571 Aminomethyltransferase folate-binding domain 15 123 9.2E-7 T 29-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal CVS42_RS19110 c6d2cccf4fed308e0cbabc71124c4415 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 29-03-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CVS42_RS19110 c6d2cccf4fed308e0cbabc71124c4415 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.5E-46 T 29-03-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CVS42_RS19110 c6d2cccf4fed308e0cbabc71124c4415 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.25 T 29-03-2018 IPR023035 Ribosomal protein S9, bacterial/plastid CVS42_RS19110 c6d2cccf4fed308e0cbabc71124c4415 130 SUPERFAMILY SSF54211 5 130 1.4E-48 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CVS42_RS19110 c6d2cccf4fed308e0cbabc71124c4415 130 Gene3D G3DSA:3.30.230.10 3 130 5.9E-52 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CVS42_RS17545 7b789fe522cb534a0d566e4b234f4d3e 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 9.4E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CVS42_RS17545 7b789fe522cb534a0d566e4b234f4d3e 206 Gene3D G3DSA:1.10.357.10 74 205 9.1E-11 T 29-03-2018 CVS42_RS17545 7b789fe522cb534a0d566e4b234f4d3e 206 SUPERFAMILY SSF48498 88 192 5.78E-6 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CVS42_RS17545 7b789fe522cb534a0d566e4b234f4d3e 206 SUPERFAMILY SSF46689 6 80 2.36E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CVS42_RS17545 7b789fe522cb534a0d566e4b234f4d3e 206 Gene3D G3DSA:1.10.10.60 52 73 1.1E-8 T 29-03-2018 CVS42_RS17545 7b789fe522cb534a0d566e4b234f4d3e 206 Gene3D G3DSA:1.10.10.60 1 51 4.8E-15 T 29-03-2018 CVS42_RS02760 224ccb2795a3c9143a07427870211fdd 367 Gene3D G3DSA:1.10.3210.10 160 291 1.4E-13 T 29-03-2018 CVS42_RS02760 224ccb2795a3c9143a07427870211fdd 367 SUPERFAMILY SSF109604 151 363 4.71E-29 T 29-03-2018 CVS42_RS02760 224ccb2795a3c9143a07427870211fdd 367 Pfam PF08668 HDOD domain 174 291 6.0E-15 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD CVS42_RS02130 389b43f89a4bb564c3e2bf494057147c 190 SMART SM00271 139 189 6.0E-7 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS02130 389b43f89a4bb564c3e2bf494057147c 190 Gene3D G3DSA:1.10.287.110 106 190 5.4E-14 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS02130 389b43f89a4bb564c3e2bf494057147c 190 Pfam PF00226 DnaJ domain 144 188 4.1E-9 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS02130 389b43f89a4bb564c3e2bf494057147c 190 Pfam PF12339 DNA-J related protein 7 132 2.5E-35 T 29-03-2018 IPR021059 DnaJ-related protein, N-terminal CVS42_RS02130 389b43f89a4bb564c3e2bf494057147c 190 SUPERFAMILY SSF46565 82 189 3.27E-14 T 29-03-2018 IPR001623 DnaJ domain CVS42_RS18650 65e9c28811b200693f03cd29913721de 112 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 6 111 3.1E-45 T 29-03-2018 IPR008231 Probable chaperone CsaA CVS42_RS18650 65e9c28811b200693f03cd29913721de 112 Gene3D G3DSA:2.40.50.140 1 112 6.6E-15 T 29-03-2018 CVS42_RS18650 65e9c28811b200693f03cd29913721de 112 Pfam PF01588 Putative tRNA binding domain 14 109 8.0E-9 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CVS42_RS18650 65e9c28811b200693f03cd29913721de 112 SUPERFAMILY SSF50249 3 111 1.06E-27 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CVS42_RS20480 b0737259b46b03c31de89be51e7925dc 100 Gene3D G3DSA:3.30.70.860 20 98 8.2E-25 T 29-03-2018 IPR035571 UPF0234/UPF0381 domain CVS42_RS20480 b0737259b46b03c31de89be51e7925dc 100 Pfam PF04175 Protein of unknown function (DUF406) 10 98 2.8E-29 T 29-03-2018 IPR005272 Conserved hypothetical protein CHP00743 CVS42_RS21610 dc97c29bb356db901d3b730176e51226 224 SUPERFAMILY SSF47781 21 90 9.64E-11 T 29-03-2018 IPR010994 RuvA domain 2-like CVS42_RS21610 dc97c29bb356db901d3b730176e51226 224 Gene3D G3DSA:3.40.140.10 99 224 1.0E-44 T 29-03-2018 CVS42_RS21610 dc97c29bb356db901d3b730176e51226 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 2.1E-74 T 29-03-2018 IPR001405 RadC protein CVS42_RS21610 dc97c29bb356db901d3b730176e51226 224 SUPERFAMILY SSF102712 114 190 4.45E-7 T 29-03-2018 CVS42_RS21610 dc97c29bb356db901d3b730176e51226 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CVS42_RS21610 dc97c29bb356db901d3b730176e51226 224 Pfam PF04002 RadC-like JAB domain 104 222 1.1E-42 T 29-03-2018 IPR025657 RadC-like JAB domain CVS42_RS08020 12e500b6c7456865f07a28fc12ff6351 814 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 46 760 3.2E-91 T 29-03-2018 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY CVS42_RS11085 d2c8b12d6581686688c5f5ccdaccacd3 140 Pfam PF00717 Peptidase S24-like 56 119 1.5E-10 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CVS42_RS11085 d2c8b12d6581686688c5f5ccdaccacd3 140 Gene3D G3DSA:2.10.109.10 24 139 1.3E-26 T 29-03-2018 CVS42_RS11085 d2c8b12d6581686688c5f5ccdaccacd3 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 90 102 3.0E-11 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CVS42_RS11085 d2c8b12d6581686688c5f5ccdaccacd3 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 62 73 3.0E-11 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CVS42_RS11085 d2c8b12d6581686688c5f5ccdaccacd3 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 51 61 3.0E-11 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CVS42_RS11085 d2c8b12d6581686688c5f5ccdaccacd3 140 SUPERFAMILY SSF51306 18 135 2.62E-32 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CVS42_RS02695 575486b40c4cebc35287873f0e914a27 219 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 150 1.5E-10 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS02695 575486b40c4cebc35287873f0e914a27 219 SUPERFAMILY SSF51161 60 204 6.24E-42 T 29-03-2018 IPR011004 Trimeric LpxA-like CVS42_RS02695 575486b40c4cebc35287873f0e914a27 219 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 125 153 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CVS42_RS02695 575486b40c4cebc35287873f0e914a27 219 Gene3D G3DSA:2.160.10.10 1 216 3.3E-40 T 29-03-2018 CVS42_RS16710 c271068847c2c8154473adc88b696888 313 Gene3D G3DSA:1.10.3720.10 12 300 4.1E-49 T 29-03-2018 CVS42_RS16710 c271068847c2c8154473adc88b696888 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 310 1.6E-31 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS16710 c271068847c2c8154473adc88b696888 313 SUPERFAMILY SSF161098 92 296 5.76E-27 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS16710 c271068847c2c8154473adc88b696888 313 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 19 70 6.2E-11 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CVS42_RS02685 b72c32fca090470e8e7a4e7cce7723f2 534 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 449 3.9E-84 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CVS42_RS02685 b72c32fca090470e8e7a4e7cce7723f2 534 Gene3D G3DSA:3.10.105.10 303 503 6.7E-62 T 29-03-2018 CVS42_RS02685 b72c32fca090470e8e7a4e7cce7723f2 534 Gene3D G3DSA:3.90.76.10 55 167 2.3E-29 T 29-03-2018 CVS42_RS02685 b72c32fca090470e8e7a4e7cce7723f2 534 SUPERFAMILY SSF53850 26 522 1.99E-136 T 29-03-2018 CVS42_RS02685 b72c32fca090470e8e7a4e7cce7723f2 534 Gene3D G3DSA:3.40.190.10 168 302 1.2E-37 T 29-03-2018 CVS42_RS02685 b72c32fca090470e8e7a4e7cce7723f2 534 PIRSF PIRSF002741 5 534 2.5E-107 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CVS42_RS10995 299052a0b1888212d100092881535078 208 Pfam PF00929 Exonuclease 32 194 1.8E-18 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CVS42_RS10995 299052a0b1888212d100092881535078 208 SUPERFAMILY SSF53098 29 197 3.76E-33 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS10995 299052a0b1888212d100092881535078 208 Gene3D G3DSA:3.30.420.10 24 199 1.1E-27 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CVS42_RS10995 299052a0b1888212d100092881535078 208 SMART SM00479 30 203 2.7E-24 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CVS42_RS09620 ac0718792d31262a9160dd893c91beca 327 SUPERFAMILY SSF46589 14 99 4.45E-23 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 CVS42_RS09620 ac0718792d31262a9160dd893c91beca 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 5.6E-107 T 29-03-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CVS42_RS09620 ac0718792d31262a9160dd893c91beca 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 327 1.5E-115 T 29-03-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CVS42_RS09620 ac0718792d31262a9160dd893c91beca 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.441 T 29-03-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CVS42_RS09620 ac0718792d31262a9160dd893c91beca 327 SUPERFAMILY SSF55681 92 327 1.22E-82 T 29-03-2018 CVS42_RS09620 ac0718792d31262a9160dd893c91beca 327 Gene3D G3DSA:3.30.930.10 7 327 9.3E-92 T 29-03-2018 CVS42_RS09620 ac0718792d31262a9160dd893c91beca 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 3.5E-26 T 29-03-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CVS42_RS16495 5704634495e198f0c1b4aade164f534e 186 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 9.2E-4 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS16495 5704634495e198f0c1b4aade164f534e 186 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 31 1.3E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS16495 5704634495e198f0c1b4aade164f534e 186 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS06910 0898b00c1c1396372e3fb11370f7e085 196 Pfam PF06042 Nucleotidyltransferase 35 193 1.1E-55 T 29-03-2018 IPR009267 Putative nucleotidyltransferase CVS42_RS12315 f8765a607fab51fb7a4f0e92d95c54a7 1020 Pfam PF00271 Helicase conserved C-terminal domain 216 324 3.1E-9 T 29-03-2018 IPR001650 Helicase, C-terminal CVS42_RS12315 f8765a607fab51fb7a4f0e92d95c54a7 1020 SUPERFAMILY SSF52540 40 327 7.56E-28 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS12315 f8765a607fab51fb7a4f0e92d95c54a7 1020 SMART SM00487 12 213 2.0E-18 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CVS42_RS12315 f8765a607fab51fb7a4f0e92d95c54a7 1020 Pfam PF04851 Type III restriction enzyme, res subunit 15 175 1.7E-18 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CVS42_RS12315 f8765a607fab51fb7a4f0e92d95c54a7 1020 Gene3D G3DSA:3.40.50.300 1 185 2.1E-20 T 29-03-2018 CVS42_RS12315 f8765a607fab51fb7a4f0e92d95c54a7 1020 Gene3D G3DSA:3.40.50.300 194 369 4.8E-11 T 29-03-2018 CVS42_RS13915 6ebc733c06baf5169edb050c35d575a5 142 Gene3D G3DSA:1.10.10.10 4 90 1.9E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS13915 6ebc733c06baf5169edb050c35d575a5 142 SUPERFAMILY SSF46785 5 134 3.83E-43 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS13915 6ebc733c06baf5169edb050c35d575a5 142 Pfam PF01475 Ferric uptake regulator family 10 130 8.2E-46 T 29-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CVS42_RS11970 b7f1ef8c7eb43bf8dc6ca9f85eb180e5 233 Gene3D G3DSA:3.40.50.720 2 233 1.8E-22 T 29-03-2018 CVS42_RS11970 b7f1ef8c7eb43bf8dc6ca9f85eb180e5 233 SUPERFAMILY SSF51735 7 230 1.29E-23 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS11970 b7f1ef8c7eb43bf8dc6ca9f85eb180e5 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 3.6E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS11970 b7f1ef8c7eb43bf8dc6ca9f85eb180e5 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 3.6E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS11970 b7f1ef8c7eb43bf8dc6ca9f85eb180e5 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 214 3.6E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS11970 b7f1ef8c7eb43bf8dc6ca9f85eb180e5 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 17 3.6E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS09165 fba0b596a6982342df307d945f89f124 108 Pfam PF06865 Protein of unknown function (DUF1255) 17 106 4.4E-34 T 29-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase CVS42_RS09165 fba0b596a6982342df307d945f89f124 108 Gene3D G3DSA:2.60.120.10 17 106 7.9E-36 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CVS42_RS09165 fba0b596a6982342df307d945f89f124 108 SUPERFAMILY SSF51182 15 107 4.01E-35 T 29-03-2018 IPR011051 RmlC-like cupin domain CVS42_RS09165 fba0b596a6982342df307d945f89f124 108 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 15 107 24.979 T 29-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase CVS42_RS13575 d0c7929a5c670c5ee7d07029f6cc3ae5 223 Pfam PF02107 Flagellar L-ring protein 43 222 5.3E-61 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CVS42_RS13575 d0c7929a5c670c5ee7d07029f6cc3ae5 223 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 220 26.321 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CVS42_RS13575 d0c7929a5c670c5ee7d07029f6cc3ae5 223 PRINTS PR01008 Flagellar L-ring protein signature 136 151 2.2E-23 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CVS42_RS13575 d0c7929a5c670c5ee7d07029f6cc3ae5 223 PRINTS PR01008 Flagellar L-ring protein signature 162 178 2.2E-23 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CVS42_RS13575 d0c7929a5c670c5ee7d07029f6cc3ae5 223 PRINTS PR01008 Flagellar L-ring protein signature 199 213 2.2E-23 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CVS42_RS13575 d0c7929a5c670c5ee7d07029f6cc3ae5 223 PRINTS PR01008 Flagellar L-ring protein signature 64 76 2.2E-23 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CVS42_RS13575 d0c7929a5c670c5ee7d07029f6cc3ae5 223 PRINTS PR01008 Flagellar L-ring protein signature 183 197 2.2E-23 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CVS42_RS19665 8f5791d6915d93bcc38682df55aff969 315 Pfam PF13377 Periplasmic binding protein-like domain 168 305 1.2E-16 T 29-03-2018 CVS42_RS19665 8f5791d6915d93bcc38682df55aff969 315 SMART SM00354 4 74 5.0E-32 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS19665 8f5791d6915d93bcc38682df55aff969 315 SUPERFAMILY SSF53822 63 308 3.14E-59 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CVS42_RS19665 8f5791d6915d93bcc38682df55aff969 315 Gene3D G3DSA:1.10.10.10 2 19 0.056 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS19665 8f5791d6915d93bcc38682df55aff969 315 SUPERFAMILY SSF47413 3 61 3.38E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS19665 8f5791d6915d93bcc38682df55aff969 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 6.1E-20 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS19665 8f5791d6915d93bcc38682df55aff969 315 Gene3D G3DSA:1.10.260.40 20 56 7.7E-21 T 29-03-2018 CVS42_RS19665 8f5791d6915d93bcc38682df55aff969 315 Gene3D G3DSA:3.40.50.2300 57 173 2.6E-24 T 29-03-2018 CVS42_RS19665 8f5791d6915d93bcc38682df55aff969 315 Gene3D G3DSA:3.40.50.2300 174 304 6.0E-22 T 29-03-2018 CVS42_RS19665 8f5791d6915d93bcc38682df55aff969 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 303 1.2E-134 T 29-03-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 CVS42_RS19665 8f5791d6915d93bcc38682df55aff969 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 4.2E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS19665 8f5791d6915d93bcc38682df55aff969 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 4.2E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CVS42_RS19665 8f5791d6915d93bcc38682df55aff969 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 29-03-2018 CVS42_RS00790 0e222495757837d025651dc60f9a48f5 453 Pfam PF00202 Aminotransferase class-III 32 439 4.0E-94 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS00790 0e222495757837d025651dc60f9a48f5 453 Gene3D G3DSA:3.90.1150.10 325 452 2.9E-35 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS00790 0e222495757837d025651dc60f9a48f5 453 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 291 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS00790 0e222495757837d025651dc60f9a48f5 453 Gene3D G3DSA:3.90.1150.10 1 93 3.4E-9 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CVS42_RS00790 0e222495757837d025651dc60f9a48f5 453 PIRSF PIRSF000521 12 446 3.4E-27 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CVS42_RS00790 0e222495757837d025651dc60f9a48f5 453 Gene3D G3DSA:3.40.640.10 94 324 5.7E-47 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CVS42_RS00790 0e222495757837d025651dc60f9a48f5 453 SUPERFAMILY SSF53383 14 444 5.18E-127 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CVS42_RS09205 a3b5bae660822e221dfc9f19514a124e 1475 Gene3D G3DSA:1.20.5.50 833 958 1.7E-4 T 29-03-2018 CVS42_RS09205 a3b5bae660822e221dfc9f19514a124e 1475 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1423 1.0E-14 T 29-03-2018 CVS42_RS09205 a3b5bae660822e221dfc9f19514a124e 1475 Pfam PF16330 MukB hinge domain 644 809 8.5E-67 T 29-03-2018 IPR032520 MukB, hinge domain CVS42_RS09205 a3b5bae660822e221dfc9f19514a124e 1475 SUPERFAMILY SSF52540 1274 1431 5.32E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09205 a3b5bae660822e221dfc9f19514a124e 1475 SUPERFAMILY SSF52540 19 53 5.32E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09205 a3b5bae660822e221dfc9f19514a124e 1475 SUPERFAMILY SSF52540 20 222 8.48E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS09205 a3b5bae660822e221dfc9f19514a124e 1475 Pfam PF04310 MukB N-terminal 2 225 1.6E-120 T 29-03-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CVS42_RS09205 a3b5bae660822e221dfc9f19514a124e 1475 Gene3D G3DSA:3.40.50.300 3 470 6.4E-12 T 29-03-2018 CVS42_RS09205 a3b5bae660822e221dfc9f19514a124e 1475 Gene3D G3DSA:3.40.50.300 1165 1435 0.002 T 29-03-2018 CVS42_RS09550 80b6e6b8aec7612befd4ecff54439f87 383 SUPERFAMILY SSF50685 50 372 2.09E-103 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CVS42_RS09550 80b6e6b8aec7612befd4ecff54439f87 383 Gene3D G3DSA:2.40.240.50 77 276 5.3E-58 T 29-03-2018 CVS42_RS09550 80b6e6b8aec7612befd4ecff54439f87 383 SMART SM00925 142 275 3.8E-69 T 29-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CVS42_RS09550 80b6e6b8aec7612befd4ecff54439f87 383 PIRSF PIRSF019422 2 163 2.7E-10 T 29-03-2018 IPR026044 Membrane-bound lytic murein transglycosylase A CVS42_RS09550 80b6e6b8aec7612befd4ecff54439f87 383 PIRSF PIRSF019422 165 380 1.3E-65 T 29-03-2018 IPR026044 Membrane-bound lytic murein transglycosylase A CVS42_RS09550 80b6e6b8aec7612befd4ecff54439f87 383 Pfam PF06725 3D domain 295 371 2.6E-19 T 29-03-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 CVS42_RS09550 80b6e6b8aec7612befd4ecff54439f87 383 Pfam PF03562 MltA specific insert domain 168 275 1.4E-33 T 29-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CVS42_RS09550 80b6e6b8aec7612befd4ecff54439f87 383 Pfam PF03562 MltA specific insert domain 132 162 5.3E-7 T 29-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CVS42_RS11725 ebecc9cba2bdd262376fd0d421384dab 235 SUPERFAMILY SSF55729 5 229 1.48E-86 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS11725 ebecc9cba2bdd262376fd0d421384dab 235 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 206 4.6E-69 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CVS42_RS11725 ebecc9cba2bdd262376fd0d421384dab 235 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 34 219 6.9E-67 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CVS42_RS11725 ebecc9cba2bdd262376fd0d421384dab 235 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 235 94.607 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CVS42_RS09795 eaa5c960f3e5da3d68ce448cb6bdc133 496 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 36 465 7.4E-114 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CVS42_RS09795 eaa5c960f3e5da3d68ce448cb6bdc133 496 SUPERFAMILY SSF81442 32 486 3.53E-121 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CVS42_RS09795 eaa5c960f3e5da3d68ce448cb6bdc133 496 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 31 486 1.8E-228 T 29-03-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 CVS42_RS09795 eaa5c960f3e5da3d68ce448cb6bdc133 496 Gene3D G3DSA:1.20.210.10 25 492 3.6E-93 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CVS42_RS09795 eaa5c960f3e5da3d68ce448cb6bdc133 496 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 226 281 - T 29-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CVS42_RS14235 8b37152d39e6632b34e0ecbaa2f46cbb 404 Pfam PF02687 FtsX-like permease family 305 392 1.2E-11 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CVS42_RS14235 8b37152d39e6632b34e0ecbaa2f46cbb 404 Pfam PF12704 MacB-like periplasmic core domain 22 212 2.7E-22 T 29-03-2018 IPR025857 MacB-like periplasmic core domain CVS42_RS18345 60fe3f7938670c99ad6e11c8617d02e8 344 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CVS42_RS18345 60fe3f7938670c99ad6e11c8617d02e8 344 Gene3D G3DSA:3.40.50.300 273 344 1.4E-10 T 29-03-2018 CVS42_RS18345 60fe3f7938670c99ad6e11c8617d02e8 344 Gene3D G3DSA:3.40.50.300 118 272 1.2E-27 T 29-03-2018 CVS42_RS18345 60fe3f7938670c99ad6e11c8617d02e8 344 Gene3D G3DSA:3.30.450.90 1 100 8.6E-27 T 29-03-2018 CVS42_RS18345 60fe3f7938670c99ad6e11c8617d02e8 344 Pfam PF00437 Type II/IV secretion system protein 12 265 7.4E-47 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CVS42_RS18345 60fe3f7938670c99ad6e11c8617d02e8 344 SMART SM00382 122 247 7.1E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS18345 60fe3f7938670c99ad6e11c8617d02e8 344 SUPERFAMILY SSF52540 5 330 1.2E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS18345 60fe3f7938670c99ad6e11c8617d02e8 344 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 1.2E-153 T 29-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 CVS42_RS14935 d79bd67885cfcba934c3df5ba70ee986 303 Pfam PF04381 Putative exonuclease, RdgC 1 299 1.8E-128 T 29-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 CVS42_RS14935 d79bd67885cfcba934c3df5ba70ee986 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 39.756 T 29-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 CVS42_RS01440 03291037f2ac7f7efcee0232d6e1a621 105 Pfam PF07383 Protein of unknown function (DUF1496) 35 84 9.4E-17 T 29-03-2018 IPR009971 Protein of unknown function DUF1496 CVS42_RS10255 d902109addd6755bf3e2cf265156c112 192 SUPERFAMILY SSF82057 121 192 3.94E-23 T 29-03-2018 CVS42_RS10255 d902109addd6755bf3e2cf265156c112 192 SMART SM00782 6 52 1.9E-12 T 29-03-2018 IPR013991 PhnA protein N-terminal, proteobacterial CVS42_RS10255 d902109addd6755bf3e2cf265156c112 192 Gene3D G3DSA:2.30.30.40 126 191 1.5E-25 T 29-03-2018 CVS42_RS10255 d902109addd6755bf3e2cf265156c112 192 Pfam PF03831 PhnA domain 127 192 9.8E-26 T 29-03-2018 IPR013988 PhnA protein, C-terminal CVS42_RS08835 8e70fe7a5aee40fd9a119157a356f8fb 216 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 44 213 38.464 T 29-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CVS42_RS08835 8e70fe7a5aee40fd9a119157a356f8fb 216 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 45 212 3.5E-71 T 29-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CVS42_RS08835 8e70fe7a5aee40fd9a119157a356f8fb 216 Pfam PF00156 Phosphoribosyl transferase domain 67 190 1.9E-15 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CVS42_RS08835 8e70fe7a5aee40fd9a119157a356f8fb 216 SUPERFAMILY SSF53271 48 212 5.25E-53 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CVS42_RS08835 8e70fe7a5aee40fd9a119157a356f8fb 216 Gene3D G3DSA:3.40.50.2020 37 215 5.4E-43 T 29-03-2018 CVS42_RS11790 af2f9566d675a62e8cb1ea8ce73a3b15 849 Gene3D G3DSA:3.40.630.30 622 819 5.2E-14 T 29-03-2018 CVS42_RS11790 af2f9566d675a62e8cb1ea8ce73a3b15 849 SUPERFAMILY SSF55729 641 819 2.52E-13 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS11790 af2f9566d675a62e8cb1ea8ce73a3b15 849 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 18 292 2.4E-15 T 29-03-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CVS42_RS11790 af2f9566d675a62e8cb1ea8ce73a3b15 849 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 538 821 1.2E-92 T 29-03-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal CVS42_RS14865 bf54cebf5ef415b2c683ff520628910d 453 SUPERFAMILY SSF55874 318 453 1.44E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS14865 bf54cebf5ef415b2c683ff520628910d 453 Gene3D G3DSA:3.30.565.10 226 453 6.4E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS14865 bf54cebf5ef415b2c683ff520628910d 453 SMART SM00387 351 453 1.1E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS14865 bf54cebf5ef415b2c683ff520628910d 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 2.8E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS14865 bf54cebf5ef415b2c683ff520628910d 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 2.8E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS14865 bf54cebf5ef415b2c683ff520628910d 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 2.8E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS14865 bf54cebf5ef415b2c683ff520628910d 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 2.8E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CVS42_RS14865 bf54cebf5ef415b2c683ff520628910d 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 453 1.5E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CVS42_RS06765 1f702e8c54a4a2befa1007e9255e31a2 421 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 26 391 1.4E-113 T 29-03-2018 IPR020010 Conserved hypothetical protein CHP03503 CVS42_RS12360 80c50a8cd2a881cc5de4cffeb69584b3 143 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 5 137 6.3E-19 T 29-03-2018 IPR009936 Protein of unknown function DUF1468 CVS42_RS11430 0f1197704a978f480dab107754cf5eb1 263 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 41 259 1.6E-97 T 29-03-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 CVS42_RS11430 0f1197704a978f480dab107754cf5eb1 263 ProSitePatterns PS00211 ABC transporters family signature. 182 196 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS11430 0f1197704a978f480dab107754cf5eb1 263 Pfam PF00005 ABC transporter 61 209 7.4E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS11430 0f1197704a978f480dab107754cf5eb1 263 Gene3D G3DSA:3.40.50.300 37 262 1.8E-56 T 29-03-2018 CVS42_RS11430 0f1197704a978f480dab107754cf5eb1 263 SUPERFAMILY SSF52540 41 259 1.39E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS11430 0f1197704a978f480dab107754cf5eb1 263 SMART SM00382 70 258 2.1E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS16865 fe690865ff4830cf496ed92546cede4e 483 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 471 2.1E-217 T 29-03-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 CVS42_RS16865 fe690865ff4830cf496ed92546cede4e 483 Pfam PF00474 Sodium:solute symporter family 36 433 3.1E-111 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CVS42_RS16865 fe690865ff4830cf496ed92546cede4e 483 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 433 5.3E-96 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CVS42_RS14055 4c99db9b153c998ccefc5031cd7ea149 225 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 212 29.375 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CVS42_RS14055 4c99db9b153c998ccefc5031cd7ea149 225 Pfam PF13500 AAA domain 3 208 1.5E-33 T 29-03-2018 CVS42_RS14055 4c99db9b153c998ccefc5031cd7ea149 225 Gene3D G3DSA:3.40.50.300 1 216 5.7E-55 T 29-03-2018 CVS42_RS14055 4c99db9b153c998ccefc5031cd7ea149 225 SUPERFAMILY SSF52540 1 216 1.19E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS14055 4c99db9b153c998ccefc5031cd7ea149 225 PIRSF PIRSF006755 1 222 1.1E-71 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CVS42_RS14055 4c99db9b153c998ccefc5031cd7ea149 225 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 176 3.0E-48 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CVS42_RS20710 ebe05afb47ec5674cccd14fcd5aa8e19 451 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 45 423 2.9E-114 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CVS42_RS20710 ebe05afb47ec5674cccd14fcd5aa8e19 451 Pfam PF02386 Cation transport protein 44 431 1.6E-56 T 29-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CVS42_RS14280 a4a18b1bb223f3c6295c2301bd1d131f 423 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 307 9.3E-15 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS14280 a4a18b1bb223f3c6295c2301bd1d131f 423 SUPERFAMILY SSF51905 260 340 1.45E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS14280 a4a18b1bb223f3c6295c2301bd1d131f 423 SUPERFAMILY SSF51905 4 109 1.45E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS14280 a4a18b1bb223f3c6295c2301bd1d131f 423 Gene3D G3DSA:3.50.50.60 1 361 7.6E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS08865 f02c56a88f23506ce5ce83506daf3778 329 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 301 3.6E-74 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CVS42_RS08865 f02c56a88f23506ce5ce83506daf3778 329 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 8 308 1.1E-102 T 29-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 CVS42_RS08865 f02c56a88f23506ce5ce83506daf3778 329 PIRSF PIRSF026649 7 312 2.3E-102 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CVS42_RS08865 f02c56a88f23506ce5ce83506daf3778 329 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 2 308 47.411 T 29-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 CVS42_RS18935 e4395c395bfe56038aa8d4e91f5d923f 223 Pfam PF02107 Flagellar L-ring protein 47 219 7.9E-60 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CVS42_RS18935 e4395c395bfe56038aa8d4e91f5d923f 223 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 220 26.276 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CVS42_RS18935 e4395c395bfe56038aa8d4e91f5d923f 223 PRINTS PR01008 Flagellar L-ring protein signature 162 178 3.1E-23 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CVS42_RS18935 e4395c395bfe56038aa8d4e91f5d923f 223 PRINTS PR01008 Flagellar L-ring protein signature 68 80 3.1E-23 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CVS42_RS18935 e4395c395bfe56038aa8d4e91f5d923f 223 PRINTS PR01008 Flagellar L-ring protein signature 183 197 3.1E-23 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CVS42_RS18935 e4395c395bfe56038aa8d4e91f5d923f 223 PRINTS PR01008 Flagellar L-ring protein signature 136 151 3.1E-23 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CVS42_RS18935 e4395c395bfe56038aa8d4e91f5d923f 223 PRINTS PR01008 Flagellar L-ring protein signature 199 213 3.1E-23 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CVS42_RS10650 ed8e0e801af68b36d6e8cef5d9b866fe 213 ProSitePatterns PS00211 ABC transporters family signature. 125 139 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CVS42_RS10650 ed8e0e801af68b36d6e8cef5d9b866fe 213 Pfam PF00005 ABC transporter 19 153 2.4E-15 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CVS42_RS10650 ed8e0e801af68b36d6e8cef5d9b866fe 213 Gene3D G3DSA:3.40.50.300 1 211 1.4E-39 T 29-03-2018 CVS42_RS10650 ed8e0e801af68b36d6e8cef5d9b866fe 213 SMART SM00382 26 211 4.2E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS10650 ed8e0e801af68b36d6e8cef5d9b866fe 213 SUPERFAMILY SSF52540 2 198 6.63E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS21315 f098576ea54e145411d61b94813fb4fa 87 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 2.4E-44 T 29-03-2018 IPR009383 Protein of unknown function DUF1040 CVS42_RS21315 f098576ea54e145411d61b94813fb4fa 87 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 86 5.0E-31 T 29-03-2018 IPR009383 Protein of unknown function DUF1040 CVS42_RS14060 10e29c6a28adb959653d952bc06fc003 272 SUPERFAMILY SSF53335 16 206 1.49E-42 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS14060 10e29c6a28adb959653d952bc06fc003 272 Pfam PF08241 Methyltransferase domain 57 148 1.9E-27 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CVS42_RS14060 10e29c6a28adb959653d952bc06fc003 272 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 17 268 9.4E-61 T 29-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 CVS42_RS14060 10e29c6a28adb959653d952bc06fc003 272 Gene3D G3DSA:3.40.50.150 34 272 1.4E-37 T 29-03-2018 CVS42_RS14060 10e29c6a28adb959653d952bc06fc003 272 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 9 270 28.879 T 29-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 CVS42_RS11125 f661fd7fbc968d47dc16bd0443c429cd 71 Pfam PF10746 Phage holin T7 family, holin superfamily II 18 61 1.7E-10 T 29-03-2018 IPR019682 Bacteriophage T7, Gp17.5, holin GO:0019076|GO:0019835 CVS42_RS07735 2e8b2a3bc6070bfe976994744d4a9522 247 SMART SM00014 92 240 1.2E-24 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CVS42_RS07735 2e8b2a3bc6070bfe976994744d4a9522 247 SUPERFAMILY SSF48317 25 127 3.27E-26 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CVS42_RS07735 2e8b2a3bc6070bfe976994744d4a9522 247 SUPERFAMILY SSF48317 159 245 3.27E-26 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CVS42_RS07735 2e8b2a3bc6070bfe976994744d4a9522 247 Pfam PF01569 PAP2 superfamily 94 244 1.3E-23 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CVS42_RS07735 2e8b2a3bc6070bfe976994744d4a9522 247 Gene3D G3DSA:1.20.144.10 25 247 1.4E-23 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CVS42_RS15885 edccc956003bb55e088058678e1651a8 290 SUPERFAMILY SSF46785 1 87 2.45E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS15885 edccc956003bb55e088058678e1651a8 290 Gene3D G3DSA:1.10.10.10 1 84 1.7E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS15885 edccc956003bb55e088058678e1651a8 290 Pfam PF03466 LysR substrate binding domain 88 286 3.0E-30 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS15885 edccc956003bb55e088058678e1651a8 290 Gene3D G3DSA:3.40.190.10 177 256 2.2E-7 T 29-03-2018 CVS42_RS15885 edccc956003bb55e088058678e1651a8 290 Gene3D G3DSA:3.40.190.10 88 176 2.0E-14 T 29-03-2018 CVS42_RS15885 edccc956003bb55e088058678e1651a8 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.7E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS15885 edccc956003bb55e088058678e1651a8 290 SUPERFAMILY SSF53850 89 288 4.52E-35 T 29-03-2018 CVS42_RS10360 1aaddd9d8648de941bb904e4ac162758 441 Gene3D G3DSA:2.40.160.60 25 441 8.1E-84 T 29-03-2018 CVS42_RS10360 1aaddd9d8648de941bb904e4ac162758 441 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 16 441 2.3E-129 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CVS42_RS10360 1aaddd9d8648de941bb904e4ac162758 441 SUPERFAMILY SSF56935 25 441 1.83E-100 T 29-03-2018 CVS42_RS15505 1801cb6006eb4e1054a1cd62801aa8a8 72 Gene3D G3DSA:3.30.1910.10 1 62 1.5E-20 T 29-03-2018 CVS42_RS15505 1801cb6006eb4e1054a1cd62801aa8a8 72 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 1.0E-6 T 29-03-2018 IPR009491 Protein of unknown function DUF1107 CVS42_RS15505 1801cb6006eb4e1054a1cd62801aa8a8 72 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 5.3E-20 T 29-03-2018 IPR009491 Protein of unknown function DUF1107 CVS42_RS04730 4ce25ba5dc21a22bb38eef33a0af1019 214 SUPERFAMILY SSF52833 8 191 4.85E-27 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS04730 4ce25ba5dc21a22bb38eef33a0af1019 214 Gene3D G3DSA:3.40.30.10 6 198 7.5E-23 T 29-03-2018 CVS42_RS03860 9ba2b2674f22bb6bd6347935aef862af 111 SUPERFAMILY SSF89946 1 111 1.83E-37 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain CVS42_RS03860 9ba2b2674f22bb6bd6347935aef862af 111 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 1 111 29.732 T 29-03-2018 IPR016716 Regulator of ribonuclease activity B CVS42_RS03860 9ba2b2674f22bb6bd6347935aef862af 111 Pfam PF06877 Regulator of ribonuclease activity B 6 107 8.5E-32 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain CVS42_RS03860 9ba2b2674f22bb6bd6347935aef862af 111 Gene3D G3DSA:3.30.70.970 1 110 1.1E-37 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain CVS42_RS03860 9ba2b2674f22bb6bd6347935aef862af 111 PIRSF PIRSF018193 1 111 6.1E-48 T 29-03-2018 IPR016716 Regulator of ribonuclease activity B CVS42_RS14370 f3a4e610d39e1aef880d15473a611119 575 Pfam PF15864 Protein glycosylation ligase 156 180 4.9E-12 T 29-03-2018 IPR031726 Protein glycosylation ligase domain CVS42_RS14370 f3a4e610d39e1aef880d15473a611119 575 Pfam PF04932 O-Antigen ligase 198 341 1.4E-10 T 29-03-2018 IPR007016 O-antigen ligase-related CVS42_RS14370 f3a4e610d39e1aef880d15473a611119 575 Gene3D G3DSA:1.25.40.10 187 562 9.8E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS14370 f3a4e610d39e1aef880d15473a611119 575 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 364 549 8.3E-35 T 29-03-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal CVS42_RS07925 54cbc8497dd75b03c0ac7384eb25d157 329 Pfam PF11059 Protein of unknown function (DUF2860) 30 328 1.2E-68 T 29-03-2018 IPR016896 Protein of unknown function DUF2860 CVS42_RS07925 54cbc8497dd75b03c0ac7384eb25d157 329 PIRSF PIRSF028696 1 329 3.3E-76 T 29-03-2018 IPR016896 Protein of unknown function DUF2860 CVS42_RS02840 83ad5f42009aeb23eaa174f19fe7b026 148 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 146 2.0E-23 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CVS42_RS02840 83ad5f42009aeb23eaa174f19fe7b026 148 TIGRFAM TIGR02801 tolR: protein TolR 12 145 2.0E-39 T 29-03-2018 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 CVS42_RS00745 cc37c15e8952385a83572f6bab4e2c8d 276 Gene3D G3DSA:1.10.3210.10 1 256 2.5E-42 T 29-03-2018 CVS42_RS00745 cc37c15e8952385a83572f6bab4e2c8d 276 SUPERFAMILY SSF109604 4 269 1.44E-69 T 29-03-2018 CVS42_RS00745 cc37c15e8952385a83572f6bab4e2c8d 276 Pfam PF08668 HDOD domain 13 204 4.2E-57 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD CVS42_RS11415 b955ed24eeade44191006978dfe7241a 144 PIRSF PIRSF028777 4 141 3.1E-49 T 29-03-2018 IPR031308 Uncharacterised conserved protein UCP028777 CVS42_RS11415 b955ed24eeade44191006978dfe7241a 144 Pfam PF03733 Inner membrane component domain 79 129 1.1E-17 T 29-03-2018 IPR005185 Inner membrane component domain CVS42_RS11415 b955ed24eeade44191006978dfe7241a 144 Pfam PF03733 Inner membrane component domain 7 57 4.1E-14 T 29-03-2018 IPR005185 Inner membrane component domain CVS42_RS03310 cdb2df3932fb3192f38d8874ec6a66aa 251 Pfam PF12686 Protein of unknown function (DUF3800) 5 185 6.9E-18 T 29-03-2018 IPR024524 Protein of unknown function DUF3800 CVS42_RS06790 e28e23924be8d1dc8ee3a32b1aac3c7f 345 SUPERFAMILY SSF81345 20 338 2.48E-56 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CVS42_RS06790 e28e23924be8d1dc8ee3a32b1aac3c7f 345 Pfam PF01032 FecCD transport family 34 338 1.0E-66 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CVS42_RS06790 e28e23924be8d1dc8ee3a32b1aac3c7f 345 Gene3D G3DSA:1.10.3470.10 22 345 2.2E-49 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CVS42_RS07275 af695e6e7f5d11640405cb192459ce6b 274 Gene3D G3DSA:3.40.190.10 34 124 4.3E-18 T 29-03-2018 CVS42_RS07275 af695e6e7f5d11640405cb192459ce6b 274 SUPERFAMILY SSF53850 35 269 9.29E-65 T 29-03-2018 CVS42_RS07275 af695e6e7f5d11640405cb192459ce6b 274 Pfam PF03180 NLPA lipoprotein 36 269 3.0E-75 T 29-03-2018 IPR004872 Lipoprotein NlpA family CVS42_RS07275 af695e6e7f5d11640405cb192459ce6b 274 Gene3D G3DSA:3.40.190.10 125 224 1.8E-37 T 29-03-2018 CVS42_RS12395 2f8ce0d50d1c21d88748335d2faf6cce 184 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 48 70 - T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CVS42_RS12395 2f8ce0d50d1c21d88748335d2faf6cce 184 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 178 5.6E-60 T 29-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CVS42_RS12395 2f8ce0d50d1c21d88748335d2faf6cce 184 PIRSF PIRSF000847 1 183 8.5E-49 T 29-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CVS42_RS12395 2f8ce0d50d1c21d88748335d2faf6cce 184 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 70 5.1E-19 T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CVS42_RS05190 bfe2a5d8da7666b5c408b6fbf80f68a8 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 323 8.0E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS05190 bfe2a5d8da7666b5c408b6fbf80f68a8 327 Gene3D G3DSA:1.10.3720.10 3 312 1.3E-35 T 29-03-2018 CVS42_RS05190 bfe2a5d8da7666b5c408b6fbf80f68a8 327 SUPERFAMILY SSF161098 93 309 3.14E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS05870 638a5cb872823e90a6278a9106ca520b 133 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 25 120 4.2E-10 T 29-03-2018 CVS42_RS05870 638a5cb872823e90a6278a9106ca520b 133 TIGRFAM TIGR02567 YscW: type III secretion system chaperone YscW 7 132 7.0E-31 T 29-03-2018 IPR013400 Type III secretion system chaperone, YscW CVS42_RS16345 7c36e4d9175e65324873270257d9e5f7 142 Pfam PF12680 SnoaL-like domain 11 112 4.3E-13 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CVS42_RS16345 7c36e4d9175e65324873270257d9e5f7 142 SUPERFAMILY SSF54427 1 134 1.9E-23 T 29-03-2018 IPR032710 NTF2-like domain CVS42_RS16345 7c36e4d9175e65324873270257d9e5f7 142 Gene3D G3DSA:3.10.450.50 5 127 1.6E-20 T 29-03-2018 CVS42_RS05520 3484c70ee0b9e840b3c552dacec3950f 265 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 254 4.8E-68 T 29-03-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 CVS42_RS05520 3484c70ee0b9e840b3c552dacec3950f 265 Pfam PF01311 Bacterial export proteins, family 1 13 245 2.5E-61 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CVS42_RS05520 3484c70ee0b9e840b3c552dacec3950f 265 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 9.7E-21 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CVS42_RS05520 3484c70ee0b9e840b3c552dacec3950f 265 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 9.7E-21 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CVS42_RS05520 3484c70ee0b9e840b3c552dacec3950f 265 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 9.7E-21 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CVS42_RS05520 3484c70ee0b9e840b3c552dacec3950f 265 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 9.7E-21 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CVS42_RS14585 8129b53862cc03a0154178712f12627c 104 Gene3D G3DSA:1.10.10.10 61 93 6.4E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS14585 8129b53862cc03a0154178712f12627c 104 Pfam PF02001 Protein of unknown function DUF134 3 90 5.7E-20 T 29-03-2018 IPR002852 Uncharacterised protein family UPF0251 CVS42_RS14585 8129b53862cc03a0154178712f12627c 104 SUPERFAMILY SSF88659 33 81 9.16E-7 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CVS42_RS14585 8129b53862cc03a0154178712f12627c 104 Gene3D G3DSA:1.10.10.60 10 60 1.2E-5 T 29-03-2018 CVS42_RS14585 8129b53862cc03a0154178712f12627c 104 Hamap MF_00674 UPF0251 protein . 2 98 22.664 T 29-03-2018 IPR002852 Uncharacterised protein family UPF0251 CVS42_RS13845 215f7d72094b8e669251ce57048e9dcc 425 Gene3D G3DSA:3.40.190.10 194 372 3.6E-21 T 29-03-2018 CVS42_RS13845 215f7d72094b8e669251ce57048e9dcc 425 Pfam PF13416 Bacterial extracellular solute-binding protein 103 398 1.0E-25 T 29-03-2018 CVS42_RS13845 215f7d72094b8e669251ce57048e9dcc 425 Gene3D G3DSA:3.40.190.10 56 161 0.035 T 29-03-2018 CVS42_RS13845 215f7d72094b8e669251ce57048e9dcc 425 PIRSF PIRSF029172 39 425 8.8E-151 T 29-03-2018 IPR027020 Protein ynjB CVS42_RS13845 215f7d72094b8e669251ce57048e9dcc 425 SUPERFAMILY SSF53850 75 423 4.19E-38 T 29-03-2018 CVS42_RS09310 5d8753285e3cd1a98ff1cd267683d0f3 442 Pfam PF01979 Amidohydrolase family 53 410 2.1E-43 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CVS42_RS09310 5d8753285e3cd1a98ff1cd267683d0f3 442 TIGRFAM TIGR03314 Se_ssnA: putative selenium metabolism protein SsnA 2 438 5.4E-219 T 29-03-2018 IPR017700 Putative aminohydrolase SsnA CVS42_RS09310 5d8753285e3cd1a98ff1cd267683d0f3 442 Gene3D G3DSA:2.30.40.10 327 416 6.3E-13 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS09310 5d8753285e3cd1a98ff1cd267683d0f3 442 Gene3D G3DSA:3.20.20.140 68 326 1.6E-25 T 29-03-2018 CVS42_RS09310 5d8753285e3cd1a98ff1cd267683d0f3 442 SUPERFAMILY SSF51556 56 334 1.0E-53 T 29-03-2018 IPR032466 Metal-dependent hydrolase CVS42_RS09310 5d8753285e3cd1a98ff1cd267683d0f3 442 SUPERFAMILY SSF51338 361 435 3.09E-26 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS09310 5d8753285e3cd1a98ff1cd267683d0f3 442 SUPERFAMILY SSF51338 2 56 3.09E-26 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS09310 5d8753285e3cd1a98ff1cd267683d0f3 442 Gene3D G3DSA:2.30.40.10 1 67 1.5E-10 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CVS42_RS15210 4b3796514403901d735f68ddae327264 178 Pfam PF04970 Lecithin retinol acyltransferase 31 136 4.7E-19 T 29-03-2018 IPR007053 LRAT-like domain CVS42_RS07920 11e4dd50a22c3ecdf115a7599cf51adf 161 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 161 35.962 T 29-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria CVS42_RS07920 11e4dd50a22c3ecdf115a7599cf51adf 161 Pfam PF03350 Uncharacterized protein family, UPF0114 10 123 1.3E-21 T 29-03-2018 IPR005134 Uncharacterised protein family UPF0114 CVS42_RS14930 288a200b9c9648732cbe12d7b9941c51 593 Pfam PF01019 Gamma-glutamyltranspeptidase 68 588 1.0E-145 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CVS42_RS14930 288a200b9c9648732cbe12d7b9941c51 593 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 54 585 5.0E-109 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CVS42_RS14930 288a200b9c9648732cbe12d7b9941c51 593 SUPERFAMILY SSF56235 47 592 3.09E-158 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CVS42_RS14930 288a200b9c9648732cbe12d7b9941c51 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 411 429 1.8E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CVS42_RS14930 288a200b9c9648732cbe12d7b9941c51 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 496 513 1.8E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CVS42_RS14930 288a200b9c9648732cbe12d7b9941c51 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 165 1.8E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CVS42_RS14930 288a200b9c9648732cbe12d7b9941c51 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 282 1.8E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CVS42_RS14930 288a200b9c9648732cbe12d7b9941c51 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 296 315 1.8E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CVS42_RS14930 288a200b9c9648732cbe12d7b9941c51 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 470 485 1.8E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CVS42_RS14930 288a200b9c9648732cbe12d7b9941c51 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 433 451 1.8E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CVS42_RS14930 288a200b9c9648732cbe12d7b9941c51 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 75 100 1.8E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CVS42_RS14930 288a200b9c9648732cbe12d7b9941c51 593 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 165 184 1.8E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CVS42_RS16935 d20b2a08e6d888b1c485ce0a8a482e98 457 PIRSF PIRSF037714 2 457 6.4E-160 T 29-03-2018 IPR017270 Putative MotA/TolQ/ExbB family protein CVS42_RS16935 d20b2a08e6d888b1c485ce0a8a482e98 457 Pfam PF01618 MotA/TolQ/ExbB proton channel family 328 436 4.1E-29 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CVS42_RS16935 d20b2a08e6d888b1c485ce0a8a482e98 457 Gene3D G3DSA:2.40.320.10 43 196 6.0E-4 T 29-03-2018 CVS42_RS09245 4cb5f27c95207f77de450cbdbe5545ca 413 Pfam PF07819 PGAP1-like protein 148 274 1.0E-7 T 29-03-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 CVS42_RS09245 4cb5f27c95207f77de450cbdbe5545ca 413 Gene3D G3DSA:3.40.50.1820 146 412 1.8E-21 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS09245 4cb5f27c95207f77de450cbdbe5545ca 413 SUPERFAMILY SSF53474 148 405 7.42E-23 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS19035 875e74ed25a57955cf4472db00012973 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.3E-26 T 29-03-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 CVS42_RS19035 875e74ed25a57955cf4472db00012973 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.5E-14 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CVS42_RS19035 875e74ed25a57955cf4472db00012973 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.5E-14 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CVS42_RS19035 875e74ed25a57955cf4472db00012973 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.5E-14 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CVS42_RS19035 875e74ed25a57955cf4472db00012973 89 Pfam PF01313 Bacterial export proteins, family 3 8 77 6.6E-23 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CVS42_RS19035 875e74ed25a57955cf4472db00012973 89 PIRSF PIRSF004669 1 89 2.8E-25 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CVS42_RS01900 7f96d39d681a7ec4d21653724818060f 573 Pfam PF03961 Flagellar Assembly Protein A 104 563 2.7E-122 T 29-03-2018 IPR005646 Flagellar assembly protein A CVS42_RS01900 7f96d39d681a7ec4d21653724818060f 573 Gene3D G3DSA:2.160.20.70 278 362 7.4E-12 T 29-03-2018 CVS42_RS01900 7f96d39d681a7ec4d21653724818060f 573 SUPERFAMILY SSF63848 300 351 5.62E-6 T 29-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CVS42_RS07400 7198ee6b97a991ee3bdbb71d3308a6e0 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 116 7.0E-23 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CVS42_RS07400 7198ee6b97a991ee3bdbb71d3308a6e0 230 SUPERFAMILY SSF161098 10 210 1.44E-43 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS07400 7198ee6b97a991ee3bdbb71d3308a6e0 230 Gene3D G3DSA:1.10.3720.10 2 227 1.7E-45 T 29-03-2018 CVS42_RS07400 7198ee6b97a991ee3bdbb71d3308a6e0 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 216 1.3E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS08370 2ce573c6b07744073bd54aa6a37f0195 245 Pfam PF03741 Integral membrane protein TerC family 16 204 1.1E-49 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CVS42_RS14045 43295caf604efeda23716b8a6973a8c2 570 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 381 536 2.1E-47 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS14045 43295caf604efeda23716b8a6973a8c2 570 Gene3D G3DSA:1.10.287.950 134 337 1.0E-7 T 29-03-2018 CVS42_RS14045 43295caf604efeda23716b8a6973a8c2 570 SUPERFAMILY SSF58104 284 570 4.53E-72 T 29-03-2018 CVS42_RS14045 43295caf604efeda23716b8a6973a8c2 570 Gene3D G3DSA:1.10.287.950 338 534 1.8E-51 T 29-03-2018 CVS42_RS14045 43295caf604efeda23716b8a6973a8c2 570 SMART SM00283 308 569 1.2E-78 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS00300 fb6a00e4ca772aa687bd137ce7584efc 309 SUPERFAMILY SSF103481 47 148 1.22E-11 T 29-03-2018 CVS42_RS00300 fb6a00e4ca772aa687bd137ce7584efc 309 SUPERFAMILY SSF103481 196 297 4.58E-13 T 29-03-2018 CVS42_RS00300 fb6a00e4ca772aa687bd137ce7584efc 309 Pfam PF00892 EamA-like transporter family 157 290 1.1E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS00300 fb6a00e4ca772aa687bd137ce7584efc 309 Pfam PF00892 EamA-like transporter family 12 144 4.0E-18 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS20305 e29369af72e9f37fd13324b268803062 296 Pfam PF13401 AAA domain 42 173 5.4E-23 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS20305 e29369af72e9f37fd13324b268803062 296 SUPERFAMILY SSF52540 5 266 2.37E-32 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS20305 e29369af72e9f37fd13324b268803062 296 Gene3D G3DSA:3.40.50.300 26 209 4.5E-9 T 29-03-2018 CVS42_RS09540 5a9820c55018a0942954977eef67d4d0 489 Pfam PF01384 Phosphate transporter family 30 477 9.3E-82 T 29-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 CVS42_RS00020 648ee9445e8ad45377fbed484bfa76fb 82 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 3.0E-21 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CVS42_RS00020 648ee9445e8ad45377fbed484bfa76fb 82 SMART SM01234 8 75 9.6E-44 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CVS42_RS00020 648ee9445e8ad45377fbed484bfa76fb 82 Pfam PF01809 Haemolytic domain 10 75 4.0E-30 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CVS42_RS00020 648ee9445e8ad45377fbed484bfa76fb 82 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.619 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CVS42_RS00020 648ee9445e8ad45377fbed484bfa76fb 82 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 13 81 1.6E-32 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CVS42_RS04270 fa193253fee73a8c7ab98e1d2f22edc5 110 Pfam PF04320 Protein with unknown function (DUF469) 6 106 3.8E-39 T 29-03-2018 IPR007416 Protein of unknown function DUF469 CVS42_RS19845 e89dfac0556985e52cf2e4276ddc9044 391 TIGRFAM TIGR00843 benE: benzoate transporter 5 376 1.2E-128 T 29-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CVS42_RS19845 e89dfac0556985e52cf2e4276ddc9044 391 Pfam PF03594 Benzoate membrane transport protein 3 376 7.0E-150 T 29-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CVS42_RS14955 dbad6a4389e807fc140c58132edbe531 254 Gene3D G3DSA:3.40.830.10 1 254 8.9E-71 T 29-03-2018 CVS42_RS14955 dbad6a4389e807fc140c58132edbe531 254 PIRSF PIRSF006157 1 254 5.6E-70 T 29-03-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 CVS42_RS14955 dbad6a4389e807fc140c58132edbe531 254 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 34 242 1.5E-26 T 29-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CVS42_RS14955 dbad6a4389e807fc140c58132edbe531 254 SUPERFAMILY SSF53213 4 254 5.36E-71 T 29-03-2018 CVS42_RS20165 97c48c75e99a73b507964ee6574ad8dc 273 Pfam PF08668 HDOD domain 14 205 2.9E-48 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD CVS42_RS20165 97c48c75e99a73b507964ee6574ad8dc 273 SUPERFAMILY SSF109604 5 264 2.83E-60 T 29-03-2018 CVS42_RS20165 97c48c75e99a73b507964ee6574ad8dc 273 Gene3D G3DSA:1.10.3210.10 2 251 1.6E-44 T 29-03-2018 CVS42_RS02450 150a788c3a70121680054b16c2298054 332 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 18 318 1.2E-108 T 29-03-2018 IPR010732 Type VI secretion, TssG-like CVS42_RS02450 150a788c3a70121680054b16c2298054 332 Pfam PF06996 Type VI secretion, TssG 18 318 2.4E-95 T 29-03-2018 IPR010732 Type VI secretion, TssG-like CVS42_RS03985 7608cd600c24e8f74c92dc25decf0e1a 67 Gene3D G3DSA:3.90.820.10 12 65 0.0013 T 29-03-2018 CVS42_RS03985 7608cd600c24e8f74c92dc25decf0e1a 67 Pfam PF09526 Probable metal-binding protein (DUF2387) 6 60 2.9E-15 T 29-03-2018 IPR012658 Conserved hypothetical protein CHP02443 CVS42_RS03985 7608cd600c24e8f74c92dc25decf0e1a 67 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 5 62 1.0E-21 T 29-03-2018 IPR012658 Conserved hypothetical protein CHP02443 CVS42_RS15625 df13835b59d918fa308b2638029106ee 118 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 36 107 1.5E-20 T 29-03-2018 IPR018660 C-type lysozyme inhibitor CVS42_RS15625 df13835b59d918fa308b2638029106ee 118 SUPERFAMILY SSF141488 32 116 1.7E-18 T 29-03-2018 IPR018660 C-type lysozyme inhibitor CVS42_RS09760 3a45399693aa0ad4eaf065216e7d89de 228 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 10 218 1.8E-51 T 29-03-2018 CVS42_RS11870 9bec9283966d35863cea173c48e709bc 190 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 22 173 1.1E-43 T 29-03-2018 IPR023826 Rhomboid-like serine protease, proteobacteria CVS42_RS11870 9bec9283966d35863cea173c48e709bc 190 Gene3D G3DSA:1.20.1540.10 1 175 2.2E-16 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CVS42_RS11870 9bec9283966d35863cea173c48e709bc 190 SUPERFAMILY SSF144091 6 174 1.7E-21 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CVS42_RS11870 9bec9283966d35863cea173c48e709bc 190 Pfam PF01694 Rhomboid family 32 175 2.5E-10 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CVS42_RS13050 003468a052bd93760ced2af354b2187a 194 SUPERFAMILY SSF55729 27 168 1.44E-21 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS13050 003468a052bd93760ced2af354b2187a 194 Gene3D G3DSA:3.40.630.30 26 174 6.5E-14 T 29-03-2018 CVS42_RS13050 003468a052bd93760ced2af354b2187a 194 Pfam PF13302 Acetyltransferase (GNAT) domain 29 161 2.1E-12 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS16525 91bf6c510860beb638633f3938cc4f16 619 Pfam PF01136 Peptidase family U32 84 311 4.3E-67 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CVS42_RS16525 91bf6c510860beb638633f3938cc4f16 619 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CVS42_RS16525 91bf6c510860beb638633f3938cc4f16 619 Pfam PF12392 Collagenase 390 504 5.9E-23 T 29-03-2018 IPR020988 Peptidase U32, collagenase CVS42_RS16525 91bf6c510860beb638633f3938cc4f16 619 Gene3D G3DSA:3.20.20.70 18 281 3.1E-9 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS19920 df620e75cfc98ae822e9ab00e28a5131 447 Pfam PF00860 Permease family 25 407 3.7E-73 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CVS42_RS19505 41a73b1a64c73013752fbb16d7bb6771 421 Pfam PF01384 Phosphate transporter family 26 409 1.8E-113 T 29-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 CVS42_RS03565 638b9e3cd7d87e329fd9e6be183216b6 213 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 96 107 - T 29-03-2018 IPR033130 Ribonuclease T2, His active site 2 Reactome: R-HSA-6798695 CVS42_RS03565 638b9e3cd7d87e329fd9e6be183216b6 213 SUPERFAMILY SSF55895 27 196 4.45E-33 T 29-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CVS42_RS03565 638b9e3cd7d87e329fd9e6be183216b6 213 Pfam PF00445 Ribonuclease T2 family 30 190 1.7E-17 T 29-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CVS42_RS03565 638b9e3cd7d87e329fd9e6be183216b6 213 Gene3D G3DSA:3.90.730.10 23 213 3.1E-37 T 29-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CVS42_RS03565 638b9e3cd7d87e329fd9e6be183216b6 213 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 57 64 - T 29-03-2018 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CVS42_RS16550 cce6a5123a3618f2cf8162f6ec050e1d 122 Gene3D G3DSA:3.40.50.2300 1 121 2.1E-36 T 29-03-2018 CVS42_RS16550 cce6a5123a3618f2cf8162f6ec050e1d 122 SMART SM00448 3 116 1.2E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS16550 cce6a5123a3618f2cf8162f6ec050e1d 122 SUPERFAMILY SSF52172 3 120 4.55E-36 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS16550 cce6a5123a3618f2cf8162f6ec050e1d 122 Pfam PF00072 Response regulator receiver domain 5 116 1.6E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS06410 880a02619f48ab218c6308a75b7ac5e6 168 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 11 152 4.7E-31 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS06410 880a02619f48ab218c6308a75b7ac5e6 168 Gene3D G3DSA:3.40.980.10 2 168 1.2E-29 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS06410 880a02619f48ab218c6308a75b7ac5e6 168 Pfam PF00994 Probable molybdopterin binding domain 14 156 6.9E-27 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS06410 880a02619f48ab218c6308a75b7ac5e6 168 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 8 168 3.4E-73 T 29-03-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 CVS42_RS06410 880a02619f48ab218c6308a75b7ac5e6 168 SMART SM00852 14 158 2.8E-23 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS06410 880a02619f48ab218c6308a75b7ac5e6 168 PIRSF PIRSF006443 1 166 8.1E-56 T 29-03-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 CVS42_RS06410 880a02619f48ab218c6308a75b7ac5e6 168 SUPERFAMILY SSF53218 4 167 5.37E-41 T 29-03-2018 IPR001453 MoaB/Mog domain CVS42_RS15510 48f099a041a51c93e8d73872396b5044 104 Pfam PF11006 Protein of unknown function (DUF2845) 23 100 6.6E-22 T 29-03-2018 IPR021268 Protein of unknown function DUF2845 CVS42_RS16360 660db236e045cc2fd99fc06a69c3b548 315 Pfam PF04463 Protein of unknown function (DUF523) 6 146 2.4E-37 T 29-03-2018 IPR007553 Domain of unknown function DUF523 CVS42_RS16360 660db236e045cc2fd99fc06a69c3b548 315 Pfam PF08349 Protein of unknown function (DUF1722) 189 306 1.2E-43 T 29-03-2018 IPR013560 Domain of unknown function DUF1722 CVS42_RS16360 660db236e045cc2fd99fc06a69c3b548 315 PIRSF PIRSF037004 1 315 1.2E-129 T 29-03-2018 IPR017087 Uncharacterised conserved protein UCP037004 CVS42_RS21305 082c1ad19da40f7a88116f65d6175f2d 329 SUPERFAMILY SSF56112 5 329 4.52E-92 T 29-03-2018 IPR011009 Protein kinase-like domain CVS42_RS21305 082c1ad19da40f7a88116f65d6175f2d 329 Hamap MF_01497 Stress response kinase A [srkA]. 5 319 48.008 T 29-03-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 CVS42_RS21305 082c1ad19da40f7a88116f65d6175f2d 329 Gene3D G3DSA:3.90.1200.10 113 324 3.4E-22 T 29-03-2018 CVS42_RS21305 082c1ad19da40f7a88116f65d6175f2d 329 Pfam PF01636 Phosphotransferase enzyme family 36 263 5.8E-44 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CVS42_RS21305 082c1ad19da40f7a88116f65d6175f2d 329 Gene3D G3DSA:3.30.200.20 7 108 8.3E-20 T 29-03-2018 CVS42_RS03835 a81141969c1be305548a07b6a050050d 211 Pfam PF03006 Haemolysin-III related 9 203 3.1E-38 T 29-03-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 CVS42_RS03835 a81141969c1be305548a07b6a050050d 211 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 11 210 6.4E-69 T 29-03-2018 IPR005744 Hly-III GO:0016021|GO:0019835 CVS42_RS11825 71c58196a89bee77a0c6ec0b784236aa 445 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 20 407 5.2E-114 T 29-03-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA CVS42_RS11825 71c58196a89bee77a0c6ec0b784236aa 445 Pfam PF08014 Domain of unknown function (DUF1704) 40 411 5.2E-130 T 29-03-2018 IPR012548 Protein of unknown function DUF1704 CVS42_RS11825 71c58196a89bee77a0c6ec0b784236aa 445 SMART SM01154 38 415 4.9E-182 T 29-03-2018 IPR012548 Protein of unknown function DUF1704 CVS42_RS09005 b4999a0e518ed7c0733837ed4f9bb4ac 154 Gene3D G3DSA:2.40.10.220 35 145 1.3E-4 T 29-03-2018 CVS42_RS04410 08df1cc9a8b9341f81390b873d1b297a 393 Pfam PF01098 Cell cycle protein 43 390 4.4E-117 T 29-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 CVS42_RS04410 08df1cc9a8b9341f81390b873d1b297a 393 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 347 371 - T 29-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CVS42_RS04410 08df1cc9a8b9341f81390b873d1b297a 393 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 43 390 2.2E-136 T 29-03-2018 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CVS42_RS00495 32b06bfff535cba5215eebea5901341e 238 Gene3D G3DSA:3.40.190.10 7 127 1.4E-7 T 29-03-2018 CVS42_RS00495 32b06bfff535cba5215eebea5901341e 238 SUPERFAMILY SSF53850 13 222 6.09E-21 T 29-03-2018 CVS42_RS00495 32b06bfff535cba5215eebea5901341e 238 Gene3D G3DSA:3.40.190.10 128 233 0.043 T 29-03-2018 CVS42_RS00495 32b06bfff535cba5215eebea5901341e 238 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 20 217 1.4E-11 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS15450 146ab0e6d0bd547096758008a07327ac 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 419 5.0E-57 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS15450 146ab0e6d0bd547096758008a07327ac 459 PIRSF PIRSF006603 8 458 7.2E-62 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS15450 146ab0e6d0bd547096758008a07327ac 459 Pfam PF01554 MatE 253 416 2.4E-17 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS15450 146ab0e6d0bd547096758008a07327ac 459 Pfam PF01554 MatE 26 185 6.2E-28 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS21730 d3de2fa28c095c0717dbbf17798354c0 244 Pfam PF00072 Response regulator receiver domain 12 120 2.7E-34 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS21730 d3de2fa28c095c0717dbbf17798354c0 244 Gene3D G3DSA:1.10.10.10 134 243 6.8E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS21730 d3de2fa28c095c0717dbbf17798354c0 244 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 236 2.5E-17 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS21730 d3de2fa28c095c0717dbbf17798354c0 244 SUPERFAMILY SSF46894 141 238 8.5E-22 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CVS42_RS21730 d3de2fa28c095c0717dbbf17798354c0 244 SMART SM00448 9 119 4.0E-49 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS21730 d3de2fa28c095c0717dbbf17798354c0 244 Gene3D G3DSA:3.40.50.2300 7 133 1.8E-42 T 29-03-2018 CVS42_RS21730 d3de2fa28c095c0717dbbf17798354c0 244 SMART SM00862 160 236 2.6E-15 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CVS42_RS21730 d3de2fa28c095c0717dbbf17798354c0 244 SUPERFAMILY SSF52172 4 133 2.99E-46 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS00555 ae7aaa5c501c7c3a0c769431d987fb6a 145 PIRSF PIRSF012335 1 145 3.6E-39 T 29-03-2018 IPR016596 Protein of unknown function UCP012335 CVS42_RS00555 ae7aaa5c501c7c3a0c769431d987fb6a 145 Pfam PF11008 Protein of unknown function (DUF2846) 17 118 2.3E-21 T 29-03-2018 IPR022548 Domain of unknown function DUF2846 CVS42_RS06680 c694aee548b168a494d5062496a5a0ae 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 13 469 4.9E-46 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CVS42_RS06680 c694aee548b168a494d5062496a5a0ae 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 461 2.2E-77 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CVS42_RS13505 c69e5eb84a1b2cc7c8b16dec28937657 212 SUPERFAMILY SSF53328 2 196 1.7E-67 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CVS42_RS13505 c69e5eb84a1b2cc7c8b16dec28937657 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.748 T 29-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CVS42_RS13505 c69e5eb84a1b2cc7c8b16dec28937657 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 29-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CVS42_RS13505 c69e5eb84a1b2cc7c8b16dec28937657 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 6.4E-76 T 29-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CVS42_RS13505 c69e5eb84a1b2cc7c8b16dec28937657 212 Pfam PF00551 Formyl transferase 2 182 3.2E-64 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CVS42_RS13505 c69e5eb84a1b2cc7c8b16dec28937657 212 Gene3D G3DSA:3.40.50.170 1 199 1.3E-72 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CVS42_RS02280 34e7381b88d9a647dad97a99bc6cb10d 68 Pfam PF04024 PspC domain 9 59 4.5E-12 T 29-03-2018 IPR007168 Phage shock protein, PspC, N-terminal CVS42_RS10480 bfedaf1ed3f36ccb79435e0815d840f3 118 Pfam PF03788 LrgA family 21 111 1.2E-22 T 29-03-2018 IPR005538 LrgA/CidA family GO:0016021 CVS42_RS14830 64bd8dc848a9f8bc697b2f4373c0833b 123 Pfam PF16358 RcsF lipoprotein 33 120 1.9E-17 T 29-03-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 CVS42_RS05910 428ec03c5a9c0c85d55d6c34b34b2dff 117 Pfam PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) 2 115 8.1E-44 T 29-03-2018 IPR013348 Type III secretion system YscG GO:0009405 CVS42_RS05910 428ec03c5a9c0c85d55d6c34b34b2dff 117 TIGRFAM TIGR02508 type_III_yscG: type III secretion protein, YscG family 2 116 2.5E-61 T 29-03-2018 IPR013348 Type III secretion system YscG GO:0009405 CVS42_RS12080 f95f50e5afaee6d4e8061608a0916dc1 815 Pfam PF01483 Proprotein convertase P-domain 677 762 2.7E-13 T 29-03-2018 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 CVS42_RS12080 f95f50e5afaee6d4e8061608a0916dc1 815 SUPERFAMILY SSF55486 244 526 3.3E-28 T 29-03-2018 CVS42_RS12080 f95f50e5afaee6d4e8061608a0916dc1 815 Gene3D G3DSA:2.60.120.260 648 764 1.4E-15 T 29-03-2018 IPR008979 Galactose-binding domain-like CVS42_RS12080 f95f50e5afaee6d4e8061608a0916dc1 815 SUPERFAMILY SSF49785 667 762 2.13E-12 T 29-03-2018 IPR008979 Galactose-binding domain-like CVS42_RS21495 a3647fc022e17ab84e144a1dcb5694dc 154 Pfam PF00588 SpoU rRNA Methylase family 2 142 1.9E-33 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CVS42_RS21495 a3647fc022e17ab84e144a1dcb5694dc 154 SUPERFAMILY SSF75217 2 152 5.1E-43 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CVS42_RS21495 a3647fc022e17ab84e144a1dcb5694dc 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 32.441 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CVS42_RS21495 a3647fc022e17ab84e144a1dcb5694dc 154 PIRSF PIRSF029256 1 154 8.6E-66 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CVS42_RS21495 a3647fc022e17ab84e144a1dcb5694dc 154 Gene3D G3DSA:3.40.1280.10 1 154 1.4E-36 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CVS42_RS21495 a3647fc022e17ab84e144a1dcb5694dc 154 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 4.6E-63 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CVS42_RS16800 aa3bc2bf079d7c2f905b2575e8b42929 134 Gene3D G3DSA:3.90.1590.10 1 133 3.4E-34 T 29-03-2018 CVS42_RS16800 aa3bc2bf079d7c2f905b2575e8b42929 134 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 113 2.4E-18 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CVS42_RS16800 aa3bc2bf079d7c2f905b2575e8b42929 134 SUPERFAMILY SSF51316 2 133 2.3E-42 T 29-03-2018 IPR011057 Mss4-like CVS42_RS11925 c942d4e9ad194818912456edc4c5912f 181 SUPERFAMILY SSF54593 8 164 4.67E-28 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS11925 c942d4e9ad194818912456edc4c5912f 181 Pfam PF06185 YecM protein 12 121 4.1E-24 T 29-03-2018 IPR010393 Protein of unknown function DUF991 CVS42_RS11925 c942d4e9ad194818912456edc4c5912f 181 Gene3D G3DSA:3.10.180.10 2 165 2.8E-37 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CVS42_RS05915 b1a5ee67626d4f8920c869805133cb84 184 TIGRFAM TIGR02509 type_III_yopR: type III secretion effector, YopR family 52 182 1.3E-48 T 29-03-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 CVS42_RS05915 b1a5ee67626d4f8920c869805133cb84 184 Pfam PF09025 YopR, type III needle-polymerisation regulator 44 183 5.9E-34 T 29-03-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 CVS42_RS05915 b1a5ee67626d4f8920c869805133cb84 184 SUPERFAMILY SSF140591 60 164 8.24E-42 T 29-03-2018 CVS42_RS04665 c0f8aa3f3768c2ae0d522d38855299e7 242 Pfam PF07670 Nucleoside recognition 82 176 9.1E-11 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CVS42_RS21055 618cd161362423ff3dd6bc088db848a4 157 Hamap MF_00598 Protein Smg [smg]. 1 157 32.376 T 29-03-2018 IPR007456 Smg CVS42_RS21055 618cd161362423ff3dd6bc088db848a4 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 1.9E-61 T 29-03-2018 IPR007456 Smg CVS42_RS21055 618cd161362423ff3dd6bc088db848a4 157 Gene3D G3DSA:1.10.10.10 6 51 4.5E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS07380 fe85bc20f941796c8ab6feee4ac90567 300 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 140 281 6.0E-47 T 29-03-2018 IPR005642 Lysine exporter LysO CVS42_RS07380 fe85bc20f941796c8ab6feee4ac90567 300 Pfam PF03956 Lysine exporter LysO 113 296 5.6E-54 T 29-03-2018 IPR005642 Lysine exporter LysO CVS42_RS16925 ecc9e36b56825688ac1315471ddac977 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 132 1.6E-30 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CVS42_RS18895 d76ea9f18a69aafcf2e1424a22ddeadd 428 Pfam PF07196 Flagellin hook IN motif 132 173 1.2E-7 T 29-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 CVS42_RS18895 d76ea9f18a69aafcf2e1424a22ddeadd 428 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 207 425 9.0E-45 T 29-03-2018 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 CVS42_RS18895 d76ea9f18a69aafcf2e1424a22ddeadd 428 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 4 98 3.3E-17 T 29-03-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 CVS42_RS01375 0684396f92d29e4dd473091f4579cd09 208 SUPERFAMILY SSF47616 81 200 2.92E-23 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CVS42_RS01375 0684396f92d29e4dd473091f4579cd09 208 Gene3D G3DSA:3.40.30.10 1 73 1.6E-20 T 29-03-2018 CVS42_RS01375 0684396f92d29e4dd473091f4579cd09 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 125 192 4.1E-12 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CVS42_RS01375 0684396f92d29e4dd473091f4579cd09 208 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 8.3E-16 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CVS42_RS01375 0684396f92d29e4dd473091f4579cd09 208 SUPERFAMILY SSF52833 1 77 2.55E-20 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS01375 0684396f92d29e4dd473091f4579cd09 208 Gene3D G3DSA:1.20.1050.10 74 205 7.3E-21 T 29-03-2018 CVS42_RS18385 d62f11b427a815f2b9001d519e62d521 178 SUPERFAMILY SSF52833 26 171 1.01E-38 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS18385 d62f11b427a815f2b9001d519e62d521 178 Pfam PF00255 Glutathione peroxidase 29 129 1.2E-25 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CVS42_RS18385 d62f11b427a815f2b9001d519e62d521 178 PRINTS PR01011 Glutathione peroxidase family signature 138 147 1.8E-10 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CVS42_RS18385 d62f11b427a815f2b9001d519e62d521 178 PRINTS PR01011 Glutathione peroxidase family signature 42 59 1.8E-10 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CVS42_RS18385 d62f11b427a815f2b9001d519e62d521 178 PRINTS PR01011 Glutathione peroxidase family signature 77 93 1.8E-10 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CVS42_RS18385 d62f11b427a815f2b9001d519e62d521 178 Gene3D G3DSA:3.40.30.10 23 177 8.6E-26 T 29-03-2018 CVS42_RS18385 d62f11b427a815f2b9001d519e62d521 178 PIRSF PIRSF000303 1 177 4.7E-52 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CVS42_RS12295 acd7ec15abee7971ff0544ce7dde3ec9 248 Gene3D G3DSA:3.40.190.10 169 248 0.03 T 29-03-2018 CVS42_RS12295 acd7ec15abee7971ff0544ce7dde3ec9 248 Gene3D G3DSA:3.40.190.10 17 168 2.2E-17 T 29-03-2018 CVS42_RS12295 acd7ec15abee7971ff0544ce7dde3ec9 248 SMART SM00062 24 248 0.0037 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS12295 acd7ec15abee7971ff0544ce7dde3ec9 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 245 7.8E-22 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS12295 acd7ec15abee7971ff0544ce7dde3ec9 248 SUPERFAMILY SSF53850 27 246 2.76E-36 T 29-03-2018 CVS42_RS00505 4aff4db065e66cbceed4f6ab9d73405a 211 Pfam PF01810 LysE type translocator 15 202 1.9E-31 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CVS42_RS02250 2f10f4e6e44931e28148d5c1047e0f13 171 Pfam PF08534 Redoxin 48 154 1.1E-12 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CVS42_RS02250 2f10f4e6e44931e28148d5c1047e0f13 171 Gene3D G3DSA:3.40.30.10 35 161 2.2E-22 T 29-03-2018 CVS42_RS02250 2f10f4e6e44931e28148d5c1047e0f13 171 SUPERFAMILY SSF52833 35 162 2.96E-27 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS03065 2e4c9e933e53fc7c366e2720a9d6a350 415 Pfam PF12704 MacB-like periplasmic core domain 17 203 3.0E-11 T 29-03-2018 IPR025857 MacB-like periplasmic core domain CVS42_RS03065 2e4c9e933e53fc7c366e2720a9d6a350 415 Pfam PF02687 FtsX-like permease family 313 406 1.3E-10 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CVS42_RS18735 cb46e003585ae0a812ef85664a0f9706 290 Pfam PF01478 Type IV leader peptidase family 139 247 4.7E-29 T 29-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CVS42_RS18735 cb46e003585ae0a812ef85664a0f9706 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 227 242 5.4E-31 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CVS42_RS18735 cb46e003585ae0a812ef85664a0f9706 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 215 226 5.4E-31 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CVS42_RS18735 cb46e003585ae0a812ef85664a0f9706 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 147 164 5.4E-31 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CVS42_RS18735 cb46e003585ae0a812ef85664a0f9706 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 204 214 5.4E-31 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CVS42_RS18735 cb46e003585ae0a812ef85664a0f9706 290 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 21 126 1.1E-34 T 29-03-2018 IPR010627 Peptidase A24A, N-terminal CVS42_RS12925 52eb87824e0dcbd54cae0aef14bfb821 320 Pfam PF03186 CobD/Cbib protein 23 286 2.1E-22 T 29-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CVS42_RS02005 27f8643cf83385e3bccfeff2174b2da2 103 Pfam PF10115 Transcriptional activator HlyU 4 92 3.4E-36 T 29-03-2018 IPR018772 Transcription activator HlyU CVS42_RS06275 39a2d4c4d1b3cc148a48688e22ce9637 450 Gene3D G3DSA:1.10.150.130 98 220 1.4E-11 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CVS42_RS06275 39a2d4c4d1b3cc148a48688e22ce9637 450 Gene3D G3DSA:1.10.443.10 221 411 2.4E-20 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS06275 39a2d4c4d1b3cc148a48688e22ce9637 450 Pfam PF13356 Arm DNA-binding domain 5 91 6.8E-12 T 29-03-2018 IPR025166 Integrase, DNA-binding domain CVS42_RS06275 39a2d4c4d1b3cc148a48688e22ce9637 450 Pfam PF00589 Phage integrase family 262 394 2.8E-9 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS06275 39a2d4c4d1b3cc148a48688e22ce9637 450 SUPERFAMILY SSF56349 104 402 5.0E-45 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CVS42_RS20235 3855ba5db4216d738791892c92e73678 161 PIRSF PIRSF018472 2 161 9.3E-54 T 29-03-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type CVS42_RS20235 3855ba5db4216d738791892c92e73678 161 Pfam PF04093 rod shape-determining protein MreD 8 154 4.7E-31 T 29-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CVS42_RS20235 3855ba5db4216d738791892c92e73678 161 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 8 153 7.7E-44 T 29-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CVS42_RS11465 449222d9f71c42541d9bf911a1d7f06d 71 Pfam PF06526 Protein of unknown function (DUF1107) 4 66 4.8E-28 T 29-03-2018 IPR009491 Protein of unknown function DUF1107 CVS42_RS11465 449222d9f71c42541d9bf911a1d7f06d 71 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 4 66 2.0E-14 T 29-03-2018 IPR009491 Protein of unknown function DUF1107 CVS42_RS11465 449222d9f71c42541d9bf911a1d7f06d 71 Gene3D G3DSA:3.30.1910.10 4 65 1.1E-26 T 29-03-2018 CVS42_RS19575 fdb6cafe1807325126febe25bcc376d4 469 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 9 458 9.3E-165 T 29-03-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 CVS42_RS19575 fdb6cafe1807325126febe25bcc376d4 469 Pfam PF03553 Na+/H+ antiporter family 163 454 1.2E-61 T 29-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CVS42_RS04315 ab11a9e833608a1dba53fb31fdb159a8 163 SUPERFAMILY SSF53597 2 163 8.12E-61 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CVS42_RS04315 ab11a9e833608a1dba53fb31fdb159a8 163 Gene3D G3DSA:3.40.430.10 39 163 4.5E-42 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CVS42_RS04315 ab11a9e833608a1dba53fb31fdb159a8 163 Gene3D G3DSA:3.40.430.10 1 38 4.3E-13 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CVS42_RS04315 ab11a9e833608a1dba53fb31fdb159a8 163 PRINTS PR00070 Dihydrofolate reductase signature 28 36 4.8E-15 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CVS42_RS04315 ab11a9e833608a1dba53fb31fdb159a8 163 PRINTS PR00070 Dihydrofolate reductase signature 94 108 4.8E-15 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CVS42_RS04315 ab11a9e833608a1dba53fb31fdb159a8 163 PRINTS PR00070 Dihydrofolate reductase signature 14 24 4.8E-15 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CVS42_RS04315 ab11a9e833608a1dba53fb31fdb159a8 163 PRINTS PR00070 Dihydrofolate reductase signature 41 52 4.8E-15 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CVS42_RS04315 ab11a9e833608a1dba53fb31fdb159a8 163 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 29-03-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 CVS42_RS04315 ab11a9e833608a1dba53fb31fdb159a8 163 PIRSF PIRSF000194 1 163 2.2E-64 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CVS42_RS04315 ab11a9e833608a1dba53fb31fdb159a8 163 Pfam PF00186 Dihydrofolate reductase 2 162 4.1E-62 T 29-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CVS42_RS07610 297a38ce3799ffb0487afbc4ff45d059 240 PIRSF PIRSF004808 1 238 6.4E-77 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CVS42_RS07610 297a38ce3799ffb0487afbc4ff45d059 240 SUPERFAMILY SSF75217 4 166 1.05E-39 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CVS42_RS07610 297a38ce3799ffb0487afbc4ff45d059 240 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 235 5.4E-88 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CVS42_RS07610 297a38ce3799ffb0487afbc4ff45d059 240 Pfam PF00588 SpoU rRNA Methylase family 5 154 1.5E-34 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CVS42_RS07610 297a38ce3799ffb0487afbc4ff45d059 240 Gene3D G3DSA:3.40.1280.10 1 164 8.7E-46 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CVS42_RS05270 c1a0657230a29bab674847a9cbd1caea 352 Pfam PF04632 Fusaric acid resistance protein family 20 347 7.0E-19 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CVS42_RS00515 2dff57b156dd7539a49a6a4b0464ab10 218 Pfam PF11769 Protein of unknown function (DUF3313) 13 206 2.7E-42 T 29-03-2018 IPR021747 Protein of unknown function DUF3313 CVS42_RS21585 3b451552d1c0820d052682c89cd741c1 311 Pfam PF04393 Protein of unknown function (DUF535) 33 305 1.3E-77 T 29-03-2018 IPR007488 Protein of unknown function DUF535 CVS42_RS20030 7a4ed9d59341af89064e4880b3c9ef85 235 Pfam PF06055 Exopolysaccharide synthesis, ExoD 36 217 6.8E-52 T 29-03-2018 IPR010331 Exopolysaccharide synthesis, ExoD CVS42_RS20030 7a4ed9d59341af89064e4880b3c9ef85 235 PIRSF PIRSF033239 24 231 3.0E-53 T 29-03-2018 IPR010331 Exopolysaccharide synthesis, ExoD CVS42_RS07690 dd3e2079dba781430c19f81294cc5772 216 Gene3D G3DSA:1.25.40.10 44 216 2.8E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS07690 dd3e2079dba781430c19f81294cc5772 216 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 1.2E-57 T 29-03-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 CVS42_RS07690 dd3e2079dba781430c19f81294cc5772 216 PIRSF PIRSF006170 1 208 1.3E-52 T 29-03-2018 IPR026039 Uncharacterised protein family UPF0070 CVS42_RS07690 dd3e2079dba781430c19f81294cc5772 216 SUPERFAMILY SSF48452 91 186 1.33E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS13070 341b87438a7aa47b3b36a1e984cd6435 431 Gene3D G3DSA:3.90.1480.10 193 427 8.2E-37 T 29-03-2018 CVS42_RS13070 341b87438a7aa47b3b36a1e984cd6435 431 Pfam PF01973 Protein of unknown function DUF115 196 354 1.2E-34 T 29-03-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like CVS42_RS20005 ea7b139a490a2224cb77811d93de8f56 165 Gene3D G3DSA:3.40.630.30 2 150 3.5E-30 T 29-03-2018 CVS42_RS20005 ea7b139a490a2224cb77811d93de8f56 165 SUPERFAMILY SSF55729 7 150 1.69E-27 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS20005 ea7b139a490a2224cb77811d93de8f56 165 Pfam PF00583 Acetyltransferase (GNAT) family 27 127 3.4E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS11845 4b3963e86c668c89f87457ae190ee9c6 191 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 180 2.0E-50 T 29-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CVS42_RS11845 4b3963e86c668c89f87457ae190ee9c6 191 SUPERFAMILY SSF89028 1 181 1.67E-55 T 29-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CVS42_RS11845 4b3963e86c668c89f87457ae190ee9c6 191 Gene3D G3DSA:1.20.1200.10 12 186 1.4E-55 T 29-03-2018 CVS42_RS11845 4b3963e86c668c89f87457ae190ee9c6 191 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 182 4.0E-23 T 29-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CVS42_RS11845 4b3963e86c668c89f87457ae190ee9c6 191 Pfam PF01923 Cobalamin adenosyltransferase 3 168 4.9E-53 T 29-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CVS42_RS08670 e3ea436a9bb272a78ecb2ea810053951 209 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 23 206 3.2E-28 T 29-03-2018 IPR018728 Domain of unknown function DUF2268 CVS42_RS16450 14959bb359da5b95da35a069ffed9d5e 480 Gene3D G3DSA:2.40.160.10 1 480 6.5E-72 T 29-03-2018 CVS42_RS16450 14959bb359da5b95da35a069ffed9d5e 480 Pfam PF03573 outer membrane porin, OprD family 42 451 8.6E-23 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 CVS42_RS07860 3b867af536f10ba9e569a880f4762ce1 345 Gene3D G3DSA:2.40.370.10 222 345 4.2E-39 T 29-03-2018 IPR023374 AttH-like domain CVS42_RS07860 3b867af536f10ba9e569a880f4762ce1 345 Pfam PF17186 Lipocalin-like domain 221 345 7.9E-40 T 29-03-2018 CVS42_RS07860 3b867af536f10ba9e569a880f4762ce1 345 Pfam PF07143 CrtC N-terminal lipocalin domain 50 218 1.3E-52 T 29-03-2018 IPR010791 AttH domain CVS42_RS07860 3b867af536f10ba9e569a880f4762ce1 345 SUPERFAMILY SSF159245 26 345 8.63E-96 T 29-03-2018 CVS42_RS07860 3b867af536f10ba9e569a880f4762ce1 345 Gene3D G3DSA:2.40.370.10 37 221 7.6E-60 T 29-03-2018 IPR023374 AttH-like domain CVS42_RS16020 b4408c984aef6ff13cf171c3c2ec0c05 170 SMART SM00935 13 167 2.4E-52 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CVS42_RS16020 b4408c984aef6ff13cf171c3c2ec0c05 170 Pfam PF03938 Outer membrane protein (OmpH-like) 13 165 1.3E-33 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CVS42_RS16020 b4408c984aef6ff13cf171c3c2ec0c05 170 SUPERFAMILY SSF111384 24 166 3.92E-37 T 29-03-2018 IPR024930 Skp domain CVS42_RS16020 b4408c984aef6ff13cf171c3c2ec0c05 170 PIRSF PIRSF002094 1 170 3.2E-46 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CVS42_RS16020 b4408c984aef6ff13cf171c3c2ec0c05 170 Gene3D G3DSA:3.30.910.20 23 81 4.9E-6 T 29-03-2018 CVS42_RS16020 b4408c984aef6ff13cf171c3c2ec0c05 170 Gene3D G3DSA:3.30.910.20 82 167 1.6E-15 T 29-03-2018 CVS42_RS05990 8970a05e080888f1c28cebd544a19adb 135 SUPERFAMILY SSF143737 24 125 2.35E-41 T 29-03-2018 CVS42_RS05990 8970a05e080888f1c28cebd544a19adb 135 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 26 124 8.9E-41 T 29-03-2018 IPR009320 Antitoxin CbeA GO:0051495 CVS42_RS05990 8970a05e080888f1c28cebd544a19adb 135 Gene3D G3DSA:3.30.450.20 34 126 2.5E-39 T 29-03-2018 CVS42_RS08480 157bc3e71b5a883fa35c62f8a25ea33f 145 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 1.1E-8 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CVS42_RS08480 157bc3e71b5a883fa35c62f8a25ea33f 145 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 41.218 T 29-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 CVS42_RS08480 157bc3e71b5a883fa35c62f8a25ea33f 145 PIRSF PIRSF006173 1 145 3.9E-66 T 29-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 CVS42_RS05475 7f9ce9e28f9fc5f2e838a4bdb1c33a46 443 Gene3D G3DSA:3.40.50.300 94 365 1.8E-84 T 29-03-2018 CVS42_RS05475 7f9ce9e28f9fc5f2e838a4bdb1c33a46 443 SUPERFAMILY SSF52540 93 364 3.99E-96 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS05475 7f9ce9e28f9fc5f2e838a4bdb1c33a46 443 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 25 436 3.1E-200 T 29-03-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS05475 7f9ce9e28f9fc5f2e838a4bdb1c33a46 443 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS05475 7f9ce9e28f9fc5f2e838a4bdb1c33a46 443 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 358 1.6E-74 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS05475 7f9ce9e28f9fc5f2e838a4bdb1c33a46 443 SMART SM00382 159 342 2.1E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CVS42_RS05475 7f9ce9e28f9fc5f2e838a4bdb1c33a46 443 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 21 437 8.4E-180 T 29-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CVS42_RS12570 543a992a00550dd44c4a82c5252ef633 285 Gene3D G3DSA:3.20.20.150 5 283 5.2E-73 T 29-03-2018 CVS42_RS12570 543a992a00550dd44c4a82c5252ef633 285 Pfam PF05114 Protein of unknown function (DUF692) 10 268 7.1E-91 T 29-03-2018 IPR007801 Uncharacterised protein family UPF0276 CVS42_RS12570 543a992a00550dd44c4a82c5252ef633 285 SUPERFAMILY SSF51658 29 209 9.53E-10 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CVS42_RS12570 543a992a00550dd44c4a82c5252ef633 285 SUPERFAMILY SSF51658 245 256 9.53E-10 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CVS42_RS06825 e984379f9deac43d20c40f6e21ab0afd 250 SUPERFAMILY SSF53850 18 237 1.63E-29 T 29-03-2018 CVS42_RS06825 e984379f9deac43d20c40f6e21ab0afd 250 Gene3D G3DSA:3.40.190.10 3 111 1.0E-15 T 29-03-2018 CVS42_RS06825 e984379f9deac43d20c40f6e21ab0afd 250 Gene3D G3DSA:3.40.190.10 112 189 0.0061 T 29-03-2018 CVS42_RS06825 e984379f9deac43d20c40f6e21ab0afd 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 21 204 9.4E-18 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS05810 710a8f57f90a2f42be9142a4d02b7355 123 TIGRFAM TIGR02503 type_III_SycN: type III secretion chaperone SycN 4 122 9.3E-41 T 29-03-2018 IPR012673 Type III secretion system chaperone SycN GO:0009306 CVS42_RS05810 710a8f57f90a2f42be9142a4d02b7355 123 SUPERFAMILY SSF69635 2 121 1.02E-41 T 29-03-2018 CVS42_RS05810 710a8f57f90a2f42be9142a4d02b7355 123 Gene3D G3DSA:3.30.1460.10 4 119 3.1E-29 T 29-03-2018 CVS42_RS03765 45b2392a40f207aba5895a2ae72684cd 200 SUPERFAMILY SSF89069 4 67 1.96E-20 T 29-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 CVS42_RS03765 45b2392a40f207aba5895a2ae72684cd 200 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 78 1.6E-28 T 29-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 CVS42_RS03765 45b2392a40f207aba5895a2ae72684cd 200 PIRSF PIRSF016938 1 198 3.1E-37 T 29-03-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 CVS42_RS03765 45b2392a40f207aba5895a2ae72684cd 200 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 135 192 5.9E-22 T 29-03-2018 IPR005573 Anti sigma-E protein RseA, C-terminal CVS42_RS03370 ff09e61b057b4c2dbf1a3ffdb28deb19 553 Gene3D G3DSA:3.40.50.2300 1 138 3.3E-4 T 29-03-2018 CVS42_RS03370 ff09e61b057b4c2dbf1a3ffdb28deb19 553 SUPERFAMILY SSF52172 1 137 7.47E-5 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS16500 d9bde0f2042970b7c6987801639385b9 130 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 5.5E-4 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS02710 fd7cac0b1f73b8088e360d696c72f30f 149 SUPERFAMILY SSF110087 4 139 1.7E-41 T 29-03-2018 IPR007410 Copper chaperone PCuAC CVS42_RS02710 fd7cac0b1f73b8088e360d696c72f30f 149 Pfam PF04314 Copper chaperone PCu(A)C 26 129 1.8E-33 T 29-03-2018 IPR007410 Copper chaperone PCuAC CVS42_RS19190 874d6d257cd422177454b0125ca909bc 288 SUPERFAMILY SSF52540 1 154 1.6E-10 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS19190 874d6d257cd422177454b0125ca909bc 288 Gene3D G3DSA:3.40.50.300 1 154 7.5E-7 T 29-03-2018 CVS42_RS19190 874d6d257cd422177454b0125ca909bc 288 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 40.79 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 CVS42_RS19190 874d6d257cd422177454b0125ca909bc 288 Pfam PF03668 P-loop ATPase protein family 1 283 1.1E-108 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 CVS42_RS19190 874d6d257cd422177454b0125ca909bc 288 PIRSF PIRSF005052 1 285 2.2E-109 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 CVS42_RS04755 90a59b7c855fc11fdf9fbbe2ca65a1d5 192 Pfam PF05137 Fimbrial assembly protein (PilN) 100 175 2.7E-15 T 29-03-2018 IPR007813 Fimbrial assembly PilN CVS42_RS15670 8270eccf45b7a8b5ff1db5407f0463de 254 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 11 251 28.8 T 29-03-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 CVS42_RS15670 8270eccf45b7a8b5ff1db5407f0463de 254 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 17 233 1.1E-43 T 29-03-2018 CVS42_RS02600 5901225e3911fcbc6f087004cb393f4d 151 Gene3D G3DSA:3.40.630.30 1 151 2.0E-26 T 29-03-2018 CVS42_RS02600 5901225e3911fcbc6f087004cb393f4d 151 Pfam PF13673 Acetyltransferase (GNAT) domain 52 148 1.6E-12 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS02600 5901225e3911fcbc6f087004cb393f4d 151 SUPERFAMILY SSF55729 1 149 2.48E-31 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS01140 f9b34348470c0de4b7f32039d90ea0c1 101 SUPERFAMILY SSF57716 2 101 6.91E-39 T 29-03-2018 CVS42_RS01140 f9b34348470c0de4b7f32039d90ea0c1 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 29-03-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CVS42_RS01140 f9b34348470c0de4b7f32039d90ea0c1 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.936 T 29-03-2018 IPR023036 Ribosomal protein S14, bacterial/plastid CVS42_RS01140 f9b34348470c0de4b7f32039d90ea0c1 101 Gene3D G3DSA:4.10.830.10 1 101 3.1E-35 T 29-03-2018 CVS42_RS01140 f9b34348470c0de4b7f32039d90ea0c1 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.9E-27 T 29-03-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CVS42_RS02465 2e3c903ee0cc7de4a2f551a9e60ca046 444 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 441 2.8E-160 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CVS42_RS02465 2e3c903ee0cc7de4a2f551a9e60ca046 444 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 442 9.9E-166 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CVS42_RS08980 199dbf134a4785f007d99496d382711e 526 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 513 1.2E-284 T 29-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CVS42_RS08980 199dbf134a4785f007d99496d382711e 526 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 526 364.913 T 29-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CVS42_RS08980 199dbf134a4785f007d99496d382711e 526 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 513 2.6E-281 T 29-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CVS42_RS21215 846c49dd83c1fb09666a67ea6c08da9e 322 SMART SM00671 102 133 30.0 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS21215 846c49dd83c1fb09666a67ea6c08da9e 322 SMART SM00671 73 101 71.0 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS21215 846c49dd83c1fb09666a67ea6c08da9e 322 SMART SM00671 134 169 0.0013 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS21215 846c49dd83c1fb09666a67ea6c08da9e 322 SMART SM00671 170 203 210.0 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS21215 846c49dd83c1fb09666a67ea6c08da9e 322 Pfam PF08238 Sel1 repeat 36 70 110.0 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS21215 846c49dd83c1fb09666a67ea6c08da9e 322 Pfam PF08238 Sel1 repeat 135 169 2.0E-7 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS21215 846c49dd83c1fb09666a67ea6c08da9e 322 Pfam PF08238 Sel1 repeat 219 229 160.0 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS21215 846c49dd83c1fb09666a67ea6c08da9e 322 Pfam PF08238 Sel1 repeat 88 101 0.85 T 29-03-2018 IPR006597 Sel1-like repeat CVS42_RS21215 846c49dd83c1fb09666a67ea6c08da9e 322 Gene3D G3DSA:2.60.40.1180 116 206 2.1E-11 T 29-03-2018 CVS42_RS21215 846c49dd83c1fb09666a67ea6c08da9e 322 Gene3D G3DSA:2.60.40.1180 83 115 5.3E-4 T 29-03-2018 CVS42_RS21215 846c49dd83c1fb09666a67ea6c08da9e 322 Gene3D G3DSA:2.60.40.1180 18 82 0.093 T 29-03-2018 CVS42_RS21215 846c49dd83c1fb09666a67ea6c08da9e 322 SUPERFAMILY SSF81901 41 229 6.28E-23 T 29-03-2018 CVS42_RS19850 0a5cab2839dd6bff68d40c5e711a112c 354 Pfam PF11301 Protein of unknown function (DUF3103) 25 352 5.3E-135 T 29-03-2018 IPR021452 Protein of unknown function DUF3103 CVS42_RS16325 56faa38e8dd23a48ccf870625636d102 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 131 399 1.4E-80 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS16325 56faa38e8dd23a48ccf870625636d102 418 Gene3D G3DSA:3.40.50.150 124 403 1.4E-64 T 29-03-2018 CVS42_RS16325 56faa38e8dd23a48ccf870625636d102 418 PIRSF PIRSF003085 15 412 2.5E-116 T 29-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CVS42_RS16325 56faa38e8dd23a48ccf870625636d102 418 SUPERFAMILY SSF53335 18 357 2.98E-84 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS13395 7baf36b8451739f0e390f25cfdacefd0 375 SMART SM00267 215 374 6.4E-40 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS13395 7baf36b8451739f0e390f25cfdacefd0 375 SUPERFAMILY SSF55073 231 372 4.63E-33 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS13395 7baf36b8451739f0e390f25cfdacefd0 375 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 370 2.0E-29 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS13395 7baf36b8451739f0e390f25cfdacefd0 375 Gene3D G3DSA:3.30.70.270 216 375 4.3E-40 T 29-03-2018 CVS42_RS13395 7baf36b8451739f0e390f25cfdacefd0 375 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 372 4.6E-30 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS21220 7a57ed316f51ceef32c2e2b5e5ba818d 331 Gene3D G3DSA:1.10.10.10 2 68 2.3E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS21220 7a57ed316f51ceef32c2e2b5e5ba818d 331 Pfam PF13280 WYL domain 151 323 2.1E-33 T 29-03-2018 IPR026881 WYL domain CVS42_RS02110 3cabdfe93aae8805dfff52a0fc8fcd52 149 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.222 T 29-03-2018 IPR003791 Protein of unknown function UPF0178 CVS42_RS02110 3cabdfe93aae8805dfff52a0fc8fcd52 149 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 2.5E-50 T 29-03-2018 IPR003791 Protein of unknown function UPF0178 CVS42_RS00105 bfaba82e79fc6e43a13302a22f4f88d7 77 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 68 - T 29-03-2018 IPR010916 TonB box, conserved site CVS42_RS07475 413019342d588c623812760d5cd4c789 354 Gene3D G3DSA:3.20.20.140 11 349 2.9E-77 T 29-03-2018 CVS42_RS07475 413019342d588c623812760d5cd4c789 354 Pfam PF00962 Adenosine/AMP deaminase 23 338 4.5E-70 T 29-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 CVS42_RS07475 413019342d588c623812760d5cd4c789 354 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 23 340 4.0E-109 T 29-03-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 CVS42_RS07475 413019342d588c623812760d5cd4c789 354 SUPERFAMILY SSF51556 17 345 4.4E-88 T 29-03-2018 IPR032466 Metal-dependent hydrolase CVS42_RS07475 413019342d588c623812760d5cd4c789 354 Hamap MF_01962 Adenine deaminase. 19 331 81.724 T 29-03-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CVS42_RS14540 a307bfb9dfedae3768ebdc9c4a6b9fa6 292 Pfam PF00483 Nucleotidyl transferase 5 241 3.3E-73 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CVS42_RS14540 a307bfb9dfedae3768ebdc9c4a6b9fa6 292 SUPERFAMILY SSF53448 4 289 3.76E-97 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS14540 a307bfb9dfedae3768ebdc9c4a6b9fa6 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 289 1.4E-163 T 29-03-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CVS42_RS14540 a307bfb9dfedae3768ebdc9c4a6b9fa6 292 Gene3D G3DSA:3.90.550.10 5 292 2.9E-75 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CVS42_RS08575 d8bdb9f719b33c030519514fb83c321e 106 Pfam PF14302 Domain of unknown function (DUF4377) 28 102 2.2E-30 T 29-03-2018 IPR025485 Domain of unknown function DUF4377 CVS42_RS02895 487c71a48168948de6d6ad468ea1f3b9 437 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CVS42_RS02895 487c71a48168948de6d6ad468ea1f3b9 437 SUPERFAMILY SSF161070 5 436 1.02E-118 T 29-03-2018 CVS42_RS02895 487c71a48168948de6d6ad468ea1f3b9 437 Pfam PF00209 Sodium:neurotransmitter symporter family 5 121 3.2E-23 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CVS42_RS02895 487c71a48168948de6d6ad468ea1f3b9 437 Pfam PF00209 Sodium:neurotransmitter symporter family 151 436 4.2E-28 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CVS42_RS02895 487c71a48168948de6d6ad468ea1f3b9 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 5.7E-14 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CVS42_RS02895 487c71a48168948de6d6ad468ea1f3b9 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 412 431 5.7E-14 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CVS42_RS02895 487c71a48168948de6d6ad468ea1f3b9 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 5.7E-14 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CVS42_RS02895 487c71a48168948de6d6ad468ea1f3b9 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 309 329 5.7E-14 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CVS42_RS02895 487c71a48168948de6d6ad468ea1f3b9 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 85 111 5.7E-14 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CVS42_RS07120 52845148e0278a7c4f43f86e95a11e48 546 Pfam PF13302 Acetyltransferase (GNAT) domain 144 279 2.7E-24 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS07120 52845148e0278a7c4f43f86e95a11e48 546 SUPERFAMILY SSF55729 143 283 2.45E-27 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS07120 52845148e0278a7c4f43f86e95a11e48 546 Gene3D G3DSA:3.40.630.30 131 339 7.9E-16 T 29-03-2018 CVS42_RS14230 6f9072efa0a38018e791a22716027fc1 399 Pfam PF02687 FtsX-like permease family 305 392 1.9E-7 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CVS42_RS14230 6f9072efa0a38018e791a22716027fc1 399 Pfam PF12704 MacB-like periplasmic core domain 21 242 1.0E-29 T 29-03-2018 IPR025857 MacB-like periplasmic core domain CVS42_RS13145 189acaee088cac486da0fd734bd4e38f 210 Pfam PF03458 UPF0126 domain 98 170 3.0E-22 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 CVS42_RS13145 189acaee088cac486da0fd734bd4e38f 210 Pfam PF03458 UPF0126 domain 11 84 2.6E-21 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 CVS42_RS11655 84d669eacf2843713a566de050cc2c2c 332 Pfam PF00762 Ferrochelatase 12 330 5.6E-117 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CVS42_RS11655 84d669eacf2843713a566de050cc2c2c 332 Gene3D G3DSA:3.40.50.1400 9 183 2.6E-51 T 29-03-2018 CVS42_RS11655 84d669eacf2843713a566de050cc2c2c 332 ProSitePatterns PS00534 Ferrochelatase signature. 200 218 - T 29-03-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CVS42_RS11655 84d669eacf2843713a566de050cc2c2c 332 Gene3D G3DSA:3.40.50.1400 184 311 3.1E-44 T 29-03-2018 CVS42_RS11655 84d669eacf2843713a566de050cc2c2c 332 Hamap MF_00323 Ferrochelatase [hemH]. 11 331 37.465 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CVS42_RS11655 84d669eacf2843713a566de050cc2c2c 332 TIGRFAM TIGR00109 hemH: ferrochelatase 11 330 5.6E-106 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CVS42_RS11655 84d669eacf2843713a566de050cc2c2c 332 SUPERFAMILY SSF53800 11 331 8.76E-105 T 29-03-2018 CVS42_RS02100 9010265b811c15ceb848de13a5fd4880 401 Pfam PF07670 Nucleoside recognition 92 189 4.2E-6 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CVS42_RS02100 9010265b811c15ceb848de13a5fd4880 401 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 82 1.1E-15 T 29-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CVS42_RS02100 9010265b811c15ceb848de13a5fd4880 401 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 400 2.0E-58 T 29-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CVS42_RS08750 5f2626b79abe52813d378921a8e1a14b 258 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 4.0E-44 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CVS42_RS10555 3da056cc0bd14cbf7ca46384f3655878 140 Pfam PF00583 Acetyltransferase (GNAT) family 32 115 4.4E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS10555 3da056cc0bd14cbf7ca46384f3655878 140 SUPERFAMILY SSF55729 12 135 3.76E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS10555 3da056cc0bd14cbf7ca46384f3655878 140 Gene3D G3DSA:3.40.630.30 33 137 2.2E-19 T 29-03-2018 CVS42_RS22060 e24e3c1c75400103852d71f4f1e7dd96 245 PIRSF PIRSF028069 3 243 5.0E-72 T 29-03-2018 IPR016866 Uncharacterised conserved protein UCP028069 CVS42_RS22060 e24e3c1c75400103852d71f4f1e7dd96 245 Pfam PF11932 Protein of unknown function (DUF3450) 20 235 1.0E-69 T 29-03-2018 IPR016866 Uncharacterised conserved protein UCP028069 CVS42_RS13695 18df33eb0a17cb38da6152cccefaa169 182 SUPERFAMILY SSF82829 71 143 3.66E-5 T 29-03-2018 CVS42_RS18505 0cdde54e45d8d2762b3e3f90c189f142 164 Gene3D G3DSA:2.40.440.10 23 162 5.3E-22 T 29-03-2018 CVS42_RS18505 0cdde54e45d8d2762b3e3f90c189f142 164 Pfam PF03734 L,D-transpeptidase catalytic domain 30 162 2.0E-20 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CVS42_RS18505 0cdde54e45d8d2762b3e3f90c189f142 164 SUPERFAMILY SSF141523 29 162 1.27E-23 T 29-03-2018 CVS42_RS08295 e6db935bf62069290c579061da7e5f82 319 Gene3D G3DSA:1.10.3720.10 4 300 2.2E-36 T 29-03-2018 CVS42_RS08295 e6db935bf62069290c579061da7e5f82 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 311 1.3E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS08295 e6db935bf62069290c579061da7e5f82 319 SUPERFAMILY SSF161098 67 135 1.31E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS08295 e6db935bf62069290c579061da7e5f82 319 SUPERFAMILY SSF161098 175 294 1.31E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS04765 2cc347e4adf7e65410f9937f8e5ee1dc 177 PIRSF PIRSF016481 1 174 4.4E-42 T 29-03-2018 IPR007446 Pilus assembly protein PilP CVS42_RS04765 2cc347e4adf7e65410f9937f8e5ee1dc 177 Pfam PF04351 Pilus assembly protein, PilP 21 170 3.5E-47 T 29-03-2018 IPR007446 Pilus assembly protein PilP CVS42_RS12765 7548c87bbeeccfdd5cbd3a8226975310 445 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 154 330 1.0E-53 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CVS42_RS12765 7548c87bbeeccfdd5cbd3a8226975310 445 SUPERFAMILY SSF52283 43 174 1.08E-49 T 29-03-2018 CVS42_RS12765 7548c87bbeeccfdd5cbd3a8226975310 445 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 236 258 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CVS42_RS12765 7548c87bbeeccfdd5cbd3a8226975310 445 SUPERFAMILY SSF51735 144 331 3.6E-59 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS12765 7548c87bbeeccfdd5cbd3a8226975310 445 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 190 217 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CVS42_RS12765 7548c87bbeeccfdd5cbd3a8226975310 445 Gene3D G3DSA:3.40.50.720 173 331 1.2E-42 T 29-03-2018 CVS42_RS12765 7548c87bbeeccfdd5cbd3a8226975310 445 SUPERFAMILY SSF55021 373 444 6.87E-18 T 29-03-2018 CVS42_RS12765 7548c87bbeeccfdd5cbd3a8226975310 445 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 265 281 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CVS42_RS12765 7548c87bbeeccfdd5cbd3a8226975310 445 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 49 362 3.7E-37 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CVS42_RS12765 7548c87bbeeccfdd5cbd3a8226975310 445 Gene3D G3DSA:3.40.50.720 16 172 8.1E-43 T 29-03-2018 CVS42_RS12765 7548c87bbeeccfdd5cbd3a8226975310 445 Gene3D G3DSA:3.30.70.260 364 444 6.5E-16 T 29-03-2018 CVS42_RS18600 14f23351bf1b0903916970bfb50a7f6c 191 Pfam PF06821 Serine hydrolase 4 164 2.6E-52 T 29-03-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 CVS42_RS18600 14f23351bf1b0903916970bfb50a7f6c 191 SUPERFAMILY SSF53474 2 162 1.54E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS18600 14f23351bf1b0903916970bfb50a7f6c 191 Gene3D G3DSA:3.40.50.1820 3 170 1.6E-14 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS00520 cde4c44432203f1b16148c66356a77c2 120 Pfam PF00031 Cystatin domain 46 99 4.7E-5 T 29-03-2018 IPR000010 Cystatin domain GO:0004869 CVS42_RS00520 cde4c44432203f1b16148c66356a77c2 120 SUPERFAMILY SSF54403 28 103 4.86E-13 T 29-03-2018 CVS42_RS00520 cde4c44432203f1b16148c66356a77c2 120 ProSitePatterns PS00287 Cysteine proteases inhibitors signature. 68 81 - T 29-03-2018 IPR018073 Proteinase inhibitor I25, cystatin, conserved site CVS42_RS00520 cde4c44432203f1b16148c66356a77c2 120 Gene3D G3DSA:3.10.450.10 28 111 8.3E-10 T 29-03-2018 CVS42_RS11105 fe1e375d013a1506818d08d2cc76bf87 174 Pfam PF05488 PAAR motif 20 87 1.1E-16 T 29-03-2018 IPR008727 PAAR motif CVS42_RS04795 1faf9c3aee48363256acf04aa22a1890 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CVS42_RS04795 1faf9c3aee48363256acf04aa22a1890 224 SUPERFAMILY SSF51366 4 218 8.9E-75 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CVS42_RS04795 1faf9c3aee48363256acf04aa22a1890 224 PIRSF PIRSF001461 1 224 8.9E-106 T 29-03-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CVS42_RS04795 1faf9c3aee48363256acf04aa22a1890 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CVS42_RS04795 1faf9c3aee48363256acf04aa22a1890 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.9E-98 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CVS42_RS04795 1faf9c3aee48363256acf04aa22a1890 224 Gene3D G3DSA:3.20.20.70 1 220 3.1E-84 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS04795 1faf9c3aee48363256acf04aa22a1890 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 8.5E-91 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CVS42_RS02470 83fa1c882c81be6841317bd0b13899b2 236 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 15 225 1.8E-70 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU CVS42_RS02470 83fa1c882c81be6841317bd0b13899b2 236 Pfam PF09850 Type VI secretion system protein DotU 16 218 3.0E-62 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU CVS42_RS01365 a8111b34dc33ee3a6bacd4530d04d83a 146 Pfam PF09980 Predicted membrane protein (DUF2214) 5 140 2.5E-23 T 29-03-2018 IPR018706 Protein of unknown function DUF2214, membrane CVS42_RS18955 aa038ed461b465b07b4d24614809f11a 235 Gene3D G3DSA:2.60.120.380 89 218 3.8E-4 T 29-03-2018 CVS42_RS18955 aa038ed461b465b07b4d24614809f11a 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 27 89 9.3E-20 T 29-03-2018 IPR005648 Flagellar hook capping protein CVS42_RS18955 aa038ed461b465b07b4d24614809f11a 235 Pfam PF13861 FlgD Tudor-like domain 101 226 5.2E-10 T 29-03-2018 IPR025963 FlgD Tudor-like domain CVS42_RS18955 aa038ed461b465b07b4d24614809f11a 235 Pfam PF13860 FlgD Ig-like domain 120 187 4.4E-9 T 29-03-2018 IPR025965 FlgD Ig-like domain CVS42_RS02655 da39451bb214c8589d20674c79edf9cd 316 ProDom PD141294 TRANSMEMBRANE MEMBRANE PROTEIN GTRIV-SF YFDI PREDICTED 1 272 3.0E-50 T 29-03-2018 CVS42_RS17795 da39451bb214c8589d20674c79edf9cd 316 ProDom PD141294 TRANSMEMBRANE MEMBRANE PROTEIN GTRIV-SF YFDI PREDICTED 1 272 3.0E-50 T 29-03-2018 CVS42_RS03515 da39451bb214c8589d20674c79edf9cd 316 ProDom PD141294 TRANSMEMBRANE MEMBRANE PROTEIN GTRIV-SF YFDI PREDICTED 1 272 3.0E-50 T 29-03-2018 CVS42_RS04785 6feed805212e8df1c6a6df7d58205545 526 Gene3D G3DSA:3.40.50.300 7 174 5.1E-5 T 29-03-2018 CVS42_RS04785 6feed805212e8df1c6a6df7d58205545 526 SUPERFAMILY SSF52540 8 223 6.4E-12 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS04785 6feed805212e8df1c6a6df7d58205545 526 Pfam PF05036 Sporulation related domain 441 512 5.3E-7 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CVS42_RS18925 b2d0fc1dfb16eb84c19dbb726bb9ec5b 132 Pfam PF10135 Rod binding protein 47 97 2.6E-11 T 29-03-2018 IPR019301 Flagellar protein FlgJ, N-terminal CVS42_RS14920 fd3847601d07dde4c487035bcb92d77a 382 Pfam PF02690 Na+/Pi-cotransporter 28 183 9.8E-20 T 29-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CVS42_RS14920 fd3847601d07dde4c487035bcb92d77a 382 Pfam PF02690 Na+/Pi-cotransporter 216 329 3.7E-18 T 29-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CVS42_RS07105 576ce7dd813fc701a80e3c6d8a373e85 727 Gene3D G3DSA:3.40.390.10 184 424 1.4E-20 T 29-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CVS42_RS07105 576ce7dd813fc701a80e3c6d8a373e85 727 SUPERFAMILY SSF55486 190 418 4.81E-14 T 29-03-2018 CVS42_RS07105 576ce7dd813fc701a80e3c6d8a373e85 727 SUPERFAMILY SSF50939 598 663 7.85E-5 T 29-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CVS42_RS07105 576ce7dd813fc701a80e3c6d8a373e85 727 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 188 414 7.4E-21 T 29-03-2018 CVS42_RS07105 576ce7dd813fc701a80e3c6d8a373e85 727 Gene3D G3DSA:2.60.40.10 454 585 1.9E-14 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS12835 58747b1585167a6794aa8d997b9712f2 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 2.8E-37 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS12835 58747b1585167a6794aa8d997b9712f2 306 SUPERFAMILY SSF161098 88 290 5.89E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS12835 58747b1585167a6794aa8d997b9712f2 306 Gene3D G3DSA:1.10.3720.10 3 294 1.0E-36 T 29-03-2018 CVS42_RS08355 311824f2f105e0ca09920d681c6a8581 185 Pfam PF13689 Domain of unknown function (DUF4154) 41 179 1.7E-30 T 29-03-2018 IPR025293 Protein of unknown function DUF4154 CVS42_RS20240 f459481712f973a9520b8e835c8a7ebb 296 PIRSF PIRSF038471 2 284 1.6E-80 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CVS42_RS20240 f459481712f973a9520b8e835c8a7ebb 296 Pfam PF04085 rod shape-determining protein MreC 125 269 1.3E-38 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CVS42_RS20240 f459481712f973a9520b8e835c8a7ebb 296 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 276 4.6E-85 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CVS42_RS03920 e80811e7b4bf652bf1aa10e65bbb77b1 211 Gene3D G3DSA:2.40.440.10 65 210 2.2E-4 T 29-03-2018 CVS42_RS03920 e80811e7b4bf652bf1aa10e65bbb77b1 211 Pfam PF13645 L,D-transpeptidase catalytic domain 46 210 7.7E-67 T 29-03-2018 IPR032676 Putative L,D-transpeptidase catalytic domain CVS42_RS12675 a5535439c00efcbc5e9f42b151c55fed 350 Pfam PF03116 NQR2, RnfD, RnfE family 4 346 1.6E-101 T 29-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 CVS42_RS12675 a5535439c00efcbc5e9f42b151c55fed 350 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 2 348 27.818 T 29-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CVS42_RS12675 a5535439c00efcbc5e9f42b151c55fed 350 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 7 346 2.5E-133 T 29-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CVS42_RS10410 d03970d2d93fc1ffb87684a5d6285f74 521 Pfam PF00884 Sulfatase 28 353 2.3E-64 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CVS42_RS10410 d03970d2d93fc1ffb87684a5d6285f74 521 Gene3D G3DSA:3.30.1120.10 389 482 1.8E-12 T 29-03-2018 CVS42_RS10410 d03970d2d93fc1ffb87684a5d6285f74 521 Gene3D G3DSA:3.40.720.10 252 388 1.4E-32 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CVS42_RS10410 d03970d2d93fc1ffb87684a5d6285f74 521 Gene3D G3DSA:3.40.720.10 23 251 7.0E-50 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CVS42_RS10410 d03970d2d93fc1ffb87684a5d6285f74 521 SUPERFAMILY SSF53649 25 470 5.09E-116 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CVS42_RS12375 e3698ea59b20cf56092b35cae845eec6 304 Gene3D G3DSA:1.10.150.130 54 164 6.6E-15 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CVS42_RS12375 e3698ea59b20cf56092b35cae845eec6 304 SUPERFAMILY SSF56349 62 301 2.0E-47 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CVS42_RS12375 e3698ea59b20cf56092b35cae845eec6 304 Pfam PF00589 Phage integrase family 166 302 1.5E-19 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS12375 e3698ea59b20cf56092b35cae845eec6 304 Gene3D G3DSA:1.10.443.10 165 303 3.7E-29 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CVS42_RS18075 81981bb687e58c233550542a2bb02600 699 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 2.8E-4 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS18075 81981bb687e58c233550542a2bb02600 699 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 4.4E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CVS42_RS17150 8c1206cf6a16a956169c0304378fa8ff 483 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 480 3.2E-180 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CVS42_RS17150 8c1206cf6a16a956169c0304378fa8ff 483 Pfam PF01546 Peptidase family M20/M25/M40 73 478 4.8E-24 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CVS42_RS17150 8c1206cf6a16a956169c0304378fa8ff 483 PRINTS PR00934 X-His dipeptidase (M25) signature 249 268 2.6E-83 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CVS42_RS17150 8c1206cf6a16a956169c0304378fa8ff 483 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 2.6E-83 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CVS42_RS17150 8c1206cf6a16a956169c0304378fa8ff 483 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 2.6E-83 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CVS42_RS17150 8c1206cf6a16a956169c0304378fa8ff 483 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 2.6E-83 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CVS42_RS17150 8c1206cf6a16a956169c0304378fa8ff 483 PRINTS PR00934 X-His dipeptidase (M25) signature 361 379 2.6E-83 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CVS42_RS17150 8c1206cf6a16a956169c0304378fa8ff 483 PRINTS PR00934 X-His dipeptidase (M25) signature 205 222 2.6E-83 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CVS42_RS17150 8c1206cf6a16a956169c0304378fa8ff 483 PRINTS PR00934 X-His dipeptidase (M25) signature 426 442 2.6E-83 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CVS42_RS17150 8c1206cf6a16a956169c0304378fa8ff 483 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 2.6E-83 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CVS42_RS17150 8c1206cf6a16a956169c0304378fa8ff 483 PRINTS PR00934 X-His dipeptidase (M25) signature 448 470 2.6E-83 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CVS42_RS17150 8c1206cf6a16a956169c0304378fa8ff 483 SUPERFAMILY SSF53187 395 479 1.01E-63 T 29-03-2018 CVS42_RS17150 8c1206cf6a16a956169c0304378fa8ff 483 SUPERFAMILY SSF53187 12 182 1.01E-63 T 29-03-2018 CVS42_RS17150 8c1206cf6a16a956169c0304378fa8ff 483 Pfam PF07687 Peptidase dimerisation domain 207 287 1.1E-5 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CVS42_RS17150 8c1206cf6a16a956169c0304378fa8ff 483 Gene3D G3DSA:3.40.630.10 4 483 2.0E-53 T 29-03-2018 CVS42_RS17150 8c1206cf6a16a956169c0304378fa8ff 483 PIRSF PIRSF016599 1 483 2.7E-206 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CVS42_RS08310 2e2440b33003ed04d49e57ed9fd6127e 228 Gene3D G3DSA:1.20.1170.10 2 228 1.6E-4 T 29-03-2018 CVS42_RS08310 2e2440b33003ed04d49e57ed9fd6127e 228 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 216 6.9E-85 T 29-03-2018 IPR014319 Phage shock protein, PspA CVS42_RS08310 2e2440b33003ed04d49e57ed9fd6127e 228 Pfam PF04012 PspA/IM30 family 2 215 1.3E-43 T 29-03-2018 IPR007157 PspA/IM30 CVS42_RS19670 4f9fff27d3b89709c798f45968faccf6 316 Pfam PF03547 Membrane transport protein 16 148 2.9E-8 T 29-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CVS42_RS19670 4f9fff27d3b89709c798f45968faccf6 316 Pfam PF03547 Membrane transport protein 165 304 8.4E-8 T 29-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CVS42_RS06515 629988fedc4b9c30d0517194b86b17ff 102 Gene3D G3DSA:3.40.30.10 1 102 6.6E-41 T 29-03-2018 CVS42_RS06515 629988fedc4b9c30d0517194b86b17ff 102 SUPERFAMILY SSF52833 10 94 4.03E-27 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS06515 629988fedc4b9c30d0517194b86b17ff 102 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 13 84 5.2E-19 T 29-03-2018 IPR011893 Selenoprotein, Rdx type CVS42_RS06515 629988fedc4b9c30d0517194b86b17ff 102 Pfam PF10262 Rdx family 12 85 2.3E-30 T 29-03-2018 IPR011893 Selenoprotein, Rdx type CVS42_RS10575 1e7375e95ae44d880c0ee2fb6ce54b08 623 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 69 99 6.3E-7 T 29-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10575 1e7375e95ae44d880c0ee2fb6ce54b08 623 Pfam PF00361 Proton-conducting membrane transporter 125 410 1.5E-49 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS10575 1e7375e95ae44d880c0ee2fb6ce54b08 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 231 257 6.2E-12 T 29-03-2018 CVS42_RS10575 1e7375e95ae44d880c0ee2fb6ce54b08 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 102 122 6.2E-12 T 29-03-2018 CVS42_RS10575 1e7375e95ae44d880c0ee2fb6ce54b08 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 301 313 6.2E-12 T 29-03-2018 CVS42_RS10575 1e7375e95ae44d880c0ee2fb6ce54b08 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 146 167 6.2E-12 T 29-03-2018 CVS42_RS10575 1e7375e95ae44d880c0ee2fb6ce54b08 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 72 97 6.2E-12 T 29-03-2018 CVS42_RS10575 1e7375e95ae44d880c0ee2fb6ce54b08 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 209 230 6.2E-12 T 29-03-2018 CVS42_RS08935 2e6ffa7dba98f3194e3a5ed0e9a2e243 198 Pfam PF06037 Bacterial protein of unknown function (DUF922) 39 191 1.5E-28 T 29-03-2018 IPR010321 Protein of unknown function DUF922 CVS42_RS09655 521d33cb878074a6be1a1efab3bbc1ab 158 SUPERFAMILY SSF56524 34 158 5.49E-13 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CVS42_RS09655 521d33cb878074a6be1a1efab3bbc1ab 158 Gene3D G3DSA:3.90.420.10 20 158 1.2E-18 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CVS42_RS09505 3d02ebbfa77ca6b5cc712f7ffdf1ff47 476 Gene3D G3DSA:1.10.287.950 170 259 2.4E-8 T 29-03-2018 CVS42_RS09505 3d02ebbfa77ca6b5cc712f7ffdf1ff47 476 Gene3D G3DSA:1.10.287.950 260 476 9.4E-46 T 29-03-2018 CVS42_RS09505 3d02ebbfa77ca6b5cc712f7ffdf1ff47 476 SMART SM00283 214 475 1.2E-63 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS09505 3d02ebbfa77ca6b5cc712f7ffdf1ff47 476 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 262 440 2.1E-40 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS09505 3d02ebbfa77ca6b5cc712f7ffdf1ff47 476 SUPERFAMILY SSF58104 166 475 1.83E-69 T 29-03-2018 CVS42_RS09505 3d02ebbfa77ca6b5cc712f7ffdf1ff47 476 SMART SM00304 234 308 31.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS09505 3d02ebbfa77ca6b5cc712f7ffdf1ff47 476 SMART SM00304 146 199 0.38 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS14165 fd912a3e9091384da02e49d5ec0f509f 540 Gene3D G3DSA:1.10.287.950 26 312 2.5E-8 T 29-03-2018 CVS42_RS14165 fd912a3e9091384da02e49d5ec0f509f 540 Gene3D G3DSA:1.10.287.950 313 540 1.7E-49 T 29-03-2018 CVS42_RS14165 fd912a3e9091384da02e49d5ec0f509f 540 SUPERFAMILY SSF58104 233 540 6.28E-70 T 29-03-2018 CVS42_RS14165 fd912a3e9091384da02e49d5ec0f509f 540 SMART SM00283 278 539 8.4E-65 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS14165 fd912a3e9091384da02e49d5ec0f509f 540 SMART SM00304 211 263 7.9E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CVS42_RS14165 fd912a3e9091384da02e49d5ec0f509f 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 3.3E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS14165 fd912a3e9091384da02e49d5ec0f509f 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 376 403 3.3E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS14165 fd912a3e9091384da02e49d5ec0f509f 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 3.3E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CVS42_RS14165 fd912a3e9091384da02e49d5ec0f509f 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 352 505 8.2E-40 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CVS42_RS05365 6259138b73ede43db0d484133fb1dfd8 135 Gene3D G3DSA:2.60.120.380 27 134 4.5E-12 T 29-03-2018 CVS42_RS18155 fdaaf926b01de28c6ad86c963725fc8f 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 4 510 2.7E-132 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CVS42_RS18155 fdaaf926b01de28c6ad86c963725fc8f 520 PIRSF PIRSF002869 1 518 1.5E-150 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CVS42_RS18155 fdaaf926b01de28c6ad86c963725fc8f 520 PRINTS PR01806 Virulence factor MviN signature 142 166 4.8E-73 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CVS42_RS18155 fdaaf926b01de28c6ad86c963725fc8f 520 PRINTS PR01806 Virulence factor MviN signature 418 435 4.8E-73 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CVS42_RS18155 fdaaf926b01de28c6ad86c963725fc8f 520 PRINTS PR01806 Virulence factor MviN signature 366 385 4.8E-73 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CVS42_RS18155 fdaaf926b01de28c6ad86c963725fc8f 520 PRINTS PR01806 Virulence factor MviN signature 54 70 4.8E-73 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CVS42_RS18155 fdaaf926b01de28c6ad86c963725fc8f 520 PRINTS PR01806 Virulence factor MviN signature 268 294 4.8E-73 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CVS42_RS18155 fdaaf926b01de28c6ad86c963725fc8f 520 PRINTS PR01806 Virulence factor MviN signature 35 54 4.8E-73 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CVS42_RS18155 fdaaf926b01de28c6ad86c963725fc8f 520 PRINTS PR01806 Virulence factor MviN signature 166 187 4.8E-73 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CVS42_RS18155 fdaaf926b01de28c6ad86c963725fc8f 520 Pfam PF03023 MviN-like protein 30 478 2.6E-140 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CVS42_RS18155 fdaaf926b01de28c6ad86c963725fc8f 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.247 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CVS42_RS13025 e2605d5c357accc185525e36266c9d05 401 Pfam PF05893 Acyl-CoA reductase (LuxC) 85 293 2.3E-25 T 29-03-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 CVS42_RS13025 e2605d5c357accc185525e36266c9d05 401 Gene3D G3DSA:3.40.605.10 47 253 1.2E-10 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CVS42_RS13025 e2605d5c357accc185525e36266c9d05 401 SUPERFAMILY SSF53720 87 314 7.98E-9 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CVS42_RS01640 992b2f9980ea0b3e7359869ef5f191e7 108 Gene3D G3DSA:2.20.25.10 3 108 4.7E-4 T 29-03-2018 CVS42_RS09705 a9217428db32362f63d6360b01b8be0b 229 SMART SM00953 79 206 3.2E-31 T 29-03-2018 IPR014914 RES domain CVS42_RS09705 a9217428db32362f63d6360b01b8be0b 229 Pfam PF08808 RES domain 72 214 3.3E-23 T 29-03-2018 IPR014914 RES domain CVS42_RS20775 7e53111ab7c6b517dd278864979136c3 82 Pfam PF13670 Peptidase propeptide and YPEB domain 8 79 2.2E-8 T 29-03-2018 IPR025711 PepSY domain CVS42_RS22035 4151d5e48063a1745de38d21c19208de 392 SUPERFAMILY SSF48452 65 225 4.27E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS22035 4151d5e48063a1745de38d21c19208de 392 Gene3D G3DSA:1.25.40.10 40 116 0.0087 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS22035 4151d5e48063a1745de38d21c19208de 392 Gene3D G3DSA:1.25.40.10 173 379 2.8E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS22035 4151d5e48063a1745de38d21c19208de 392 Gene3D G3DSA:1.25.40.10 117 172 3.1E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS07820 08ba518aa2155886885f6cfb3a0aedda 361 Gene3D G3DSA:3.90.1200.10 2 198 3.6E-5 T 29-03-2018 CVS42_RS07820 08ba518aa2155886885f6cfb3a0aedda 361 SUPERFAMILY SSF56112 46 193 1.99E-11 T 29-03-2018 IPR011009 Protein kinase-like domain CVS42_RS05715 e6d6f59fdcacf304d16e8f48fa40e4df 391 Pfam PF04326 Putative DNA-binding domain 15 143 5.6E-15 T 29-03-2018 IPR007421 Schlafen, AAA domain GO:0005524 CVS42_RS08525 4078f38988519a4c51d870d7d63c8602 178 Pfam PF14539 Domain of unknown function (DUF4442) 38 126 3.0E-8 T 29-03-2018 IPR027961 Protein of unknown function DUF4442 CVS42_RS08525 4078f38988519a4c51d870d7d63c8602 178 Gene3D G3DSA:3.10.129.10 16 178 2.1E-13 T 29-03-2018 CVS42_RS08525 4078f38988519a4c51d870d7d63c8602 178 SUPERFAMILY SSF54637 33 156 7.09E-13 T 29-03-2018 IPR029069 HotDog domain CVS42_RS15950 5a9b694e46d425f7f0e22c2c24102a51 390 SUPERFAMILY SSF103473 4 379 8.63E-50 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS15950 5a9b694e46d425f7f0e22c2c24102a51 390 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 75 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CVS42_RS15950 5a9b694e46d425f7f0e22c2c24102a51 390 Gene3D G3DSA:1.20.1250.20 1 186 1.6E-29 T 29-03-2018 CVS42_RS15950 5a9b694e46d425f7f0e22c2c24102a51 390 Gene3D G3DSA:1.20.1250.20 195 389 1.2E-11 T 29-03-2018 CVS42_RS15950 5a9b694e46d425f7f0e22c2c24102a51 390 Pfam PF07690 Major Facilitator Superfamily 9 327 1.6E-40 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS09475 ce1de715b33a486bc385cc3b6a9714f7 347 Pfam PF04245 37-kD nucleoid-associated bacterial protein 19 333 1.3E-48 T 29-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CVS42_RS11010 289127cc85d66e2756a0355efb1b3c88 344 Pfam PF02661 Fic/DOC family 192 294 2.2E-14 T 29-03-2018 IPR003812 Fido domain CVS42_RS11010 289127cc85d66e2756a0355efb1b3c88 344 SUPERFAMILY SSF140931 172 338 4.32E-23 T 29-03-2018 IPR003812 Fido domain CVS42_RS11010 289127cc85d66e2756a0355efb1b3c88 344 Gene3D G3DSA:1.10.3290.10 150 343 4.7E-23 T 29-03-2018 IPR003812 Fido domain CVS42_RS11330 77fc68ec831ef69a137f032fc8b486ae 91 Gene3D G3DSA:1.10.260.40 15 87 7.1E-11 T 29-03-2018 CVS42_RS11330 77fc68ec831ef69a137f032fc8b486ae 91 SMART SM00530 22 79 1.0E-5 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS11330 77fc68ec831ef69a137f032fc8b486ae 91 SUPERFAMILY SSF47413 16 79 6.44E-10 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS11330 77fc68ec831ef69a137f032fc8b486ae 91 Pfam PF01381 Helix-turn-helix 23 73 8.8E-8 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CVS42_RS15755 b73dadfe0f8a728ea53006991212b930 300 SMART SM00267 133 299 1.2E-41 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS15755 b73dadfe0f8a728ea53006991212b930 300 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 295 4.5E-39 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS15755 b73dadfe0f8a728ea53006991212b930 300 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 144 296 1.0E-34 T 29-03-2018 IPR000160 GGDEF domain CVS42_RS15755 b73dadfe0f8a728ea53006991212b930 300 SUPERFAMILY SSF55073 149 295 1.1E-38 T 29-03-2018 IPR029787 Nucleotide cyclase CVS42_RS15755 b73dadfe0f8a728ea53006991212b930 300 Gene3D G3DSA:3.30.70.270 137 298 4.9E-44 T 29-03-2018 CVS42_RS13445 ef8774b6c1c25cc5f743d73bd0007ace 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 4.5E-75 T 29-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CVS42_RS13445 ef8774b6c1c25cc5f743d73bd0007ace 236 Pfam PF01895 PhoU domain 28 112 9.2E-21 T 29-03-2018 IPR026022 PhoU domain CVS42_RS13445 ef8774b6c1c25cc5f743d73bd0007ace 236 Pfam PF01895 PhoU domain 127 212 1.4E-17 T 29-03-2018 IPR026022 PhoU domain CVS42_RS13445 ef8774b6c1c25cc5f743d73bd0007ace 236 SUPERFAMILY SSF109755 13 228 1.15E-70 T 29-03-2018 CVS42_RS13445 ef8774b6c1c25cc5f743d73bd0007ace 236 Gene3D G3DSA:1.20.58.220 119 230 1.2E-29 T 29-03-2018 CVS42_RS13445 ef8774b6c1c25cc5f743d73bd0007ace 236 Gene3D G3DSA:1.20.58.220 6 118 6.5E-28 T 29-03-2018 CVS42_RS13445 ef8774b6c1c25cc5f743d73bd0007ace 236 PIRSF PIRSF003107 7 226 1.4E-70 T 29-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CVS42_RS02310 233894fdf48b22a357d47cc9865be75d 285 SUPERFAMILY SSF103481 179 276 1.29E-11 T 29-03-2018 CVS42_RS02310 233894fdf48b22a357d47cc9865be75d 285 SUPERFAMILY SSF103481 40 138 1.31E-14 T 29-03-2018 CVS42_RS02310 233894fdf48b22a357d47cc9865be75d 285 Pfam PF00892 EamA-like transporter family 143 267 5.5E-7 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS02310 233894fdf48b22a357d47cc9865be75d 285 Pfam PF00892 EamA-like transporter family 6 136 1.2E-12 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS13820 3d323c0689b6542042906a897c9853e8 92 Gene3D G3DSA:3.10.50.40 1 92 5.8E-28 T 29-03-2018 CVS42_RS13820 3d323c0689b6542042906a897c9853e8 92 SUPERFAMILY SSF54534 3 89 6.41E-26 T 29-03-2018 CVS42_RS13820 3d323c0689b6542042906a897c9853e8 92 Pfam PF00639 PPIC-type PPIASE domain 12 88 7.9E-19 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CVS42_RS07495 ccfb2468ac77fbf89267fc09225d453b 308 SUPERFAMILY SSF161111 15 219 8.89E-35 T 29-03-2018 CVS42_RS07495 ccfb2468ac77fbf89267fc09225d453b 308 Pfam PF01545 Cation efflux family 19 217 1.5E-32 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CVS42_RS07495 ccfb2468ac77fbf89267fc09225d453b 308 Gene3D G3DSA:1.20.1510.10 14 220 2.3E-29 T 29-03-2018 CVS42_RS07495 ccfb2468ac77fbf89267fc09225d453b 308 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 16 246 3.5E-25 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CVS42_RS11490 8eca84135a855aeac576e3e944fe614a 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 250 5.6E-65 T 29-03-2018 CVS42_RS11490 8eca84135a855aeac576e3e944fe614a 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 2.0E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS11490 8eca84135a855aeac576e3e944fe614a 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.0E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS11490 8eca84135a855aeac576e3e944fe614a 254 Gene3D G3DSA:3.40.50.720 42 254 1.6E-58 T 29-03-2018 CVS42_RS11490 8eca84135a855aeac576e3e944fe614a 254 Gene3D G3DSA:3.40.50.720 2 41 7.4E-10 T 29-03-2018 CVS42_RS11490 8eca84135a855aeac576e3e944fe614a 254 SUPERFAMILY SSF51735 6 251 1.45E-78 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS11490 8eca84135a855aeac576e3e944fe614a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS11490 8eca84135a855aeac576e3e944fe614a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS11490 8eca84135a855aeac576e3e944fe614a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 4.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS11490 8eca84135a855aeac576e3e944fe614a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS11490 8eca84135a855aeac576e3e944fe614a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 4.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS11490 8eca84135a855aeac576e3e944fe614a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS00925 77be93e75448ed691dea3091f127cd50 226 Gene3D G3DSA:3.40.50.150 12 221 3.6E-22 T 29-03-2018 CVS42_RS00925 77be93e75448ed691dea3091f127cd50 226 SUPERFAMILY SSF53335 2 190 1.08E-31 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS00925 77be93e75448ed691dea3091f127cd50 226 Pfam PF13649 Methyltransferase domain 72 169 2.3E-7 T 29-03-2018 CVS42_RS00935 a7381ea564f908192845cab61f478175 705 Pfam PF13502 AsmA-like C-terminal region 440 625 1.9E-11 T 29-03-2018 IPR032712 AsmA-like, C-terminal CVS42_RS12975 f67dc746e922081037d9ae3c74e6cf27 229 Pfam PF08889 WbqC-like protein family 7 218 1.8E-77 T 29-03-2018 IPR014985 WbqC-like protein family CVS42_RS01700 28bd6781abd27e34b2dc5a3296f02c3c 375 SUPERFAMILY SSF110849 52 100 1.92E-5 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CVS42_RS01700 28bd6781abd27e34b2dc5a3296f02c3c 375 Gene3D G3DSA:3.90.1530.10 5 140 5.8E-11 T 29-03-2018 CVS42_RS16300 8b6370bbb43c20d5293f74807131e7b3 74 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 2.3E-23 T 29-03-2018 IPR007495 (Na+)-NQR maturation factor NqrM CVS42_RS12235 84e36c4604ad2655b9dcd671a99e720a 132 SUPERFAMILY SSF54427 4 129 2.42E-36 T 29-03-2018 IPR032710 NTF2-like domain CVS42_RS12235 84e36c4604ad2655b9dcd671a99e720a 132 Pfam PF12680 SnoaL-like domain 12 107 8.8E-10 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CVS42_RS12235 84e36c4604ad2655b9dcd671a99e720a 132 Gene3D G3DSA:3.10.450.50 4 131 1.4E-17 T 29-03-2018 CVS42_RS01460 f62f697181affbd3a3e3e665be9c62c3 195 Pfam PF14163 Super-infection exclusion protein B 18 164 2.4E-40 T 29-03-2018 IPR025982 Superinfection exclusion protein B CVS42_RS02720 11ba1772b78ec3367a7a217c2051967c 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 5.6E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02720 11ba1772b78ec3367a7a217c2051967c 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 5.6E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02720 11ba1772b78ec3367a7a217c2051967c 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 5.6E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02720 11ba1772b78ec3367a7a217c2051967c 226 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 182 0.0027 T 29-03-2018 CVS42_RS02720 11ba1772b78ec3367a7a217c2051967c 226 Gene3D G3DSA:3.40.50.720 1 223 9.5E-42 T 29-03-2018 CVS42_RS02720 11ba1772b78ec3367a7a217c2051967c 226 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CVS42_RS02720 11ba1772b78ec3367a7a217c2051967c 226 SUPERFAMILY SSF51735 3 213 4.93E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain CVS42_RS02720 11ba1772b78ec3367a7a217c2051967c 226 Pfam PF00106 short chain dehydrogenase 3 187 7.7E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02720 11ba1772b78ec3367a7a217c2051967c 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 7.7E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02720 11ba1772b78ec3367a7a217c2051967c 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 7.7E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02720 11ba1772b78ec3367a7a217c2051967c 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 7.7E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS02720 11ba1772b78ec3367a7a217c2051967c 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 7.7E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CVS42_RS21825 bea37867fcc7cb47f3505746296a54bc 217 Gene3D G3DSA:3.40.50.10070 28 191 5.2E-10 T 29-03-2018 CVS42_RS21825 bea37867fcc7cb47f3505746296a54bc 217 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 10 208 1.3E-92 T 29-03-2018 IPR008517 Protein of unknown function DUF799 CVS42_RS08420 ff06a3043f9563bb3b0fd31fbaa7baaa 419 Pfam PF07690 Major Facilitator Superfamily 34 364 1.1E-31 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CVS42_RS08420 ff06a3043f9563bb3b0fd31fbaa7baaa 419 SUPERFAMILY SSF103473 9 396 1.09E-44 T 29-03-2018 IPR020846 Major facilitator superfamily domain CVS42_RS08420 ff06a3043f9563bb3b0fd31fbaa7baaa 419 Gene3D G3DSA:1.20.1250.20 10 203 3.3E-21 T 29-03-2018 CVS42_RS08420 ff06a3043f9563bb3b0fd31fbaa7baaa 419 Gene3D G3DSA:1.20.1250.20 206 417 1.6E-17 T 29-03-2018 CVS42_RS11975 81beb4671793b106e12ccc13eae411ab 135 SUPERFAMILY SSF47413 3 62 9.5E-6 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS11975 81beb4671793b106e12ccc13eae411ab 135 Gene3D G3DSA:1.10.260.40 4 117 4.2E-6 T 29-03-2018 CVS42_RS00705 85a74dc24e02b44280b28f261b777e7a 328 Pfam PF13407 Periplasmic binding protein domain 26 297 1.0E-61 T 29-03-2018 IPR025997 Periplasmic binding protein CVS42_RS00705 85a74dc24e02b44280b28f261b777e7a 328 SUPERFAMILY SSF53822 23 327 3.08E-82 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CVS42_RS00705 85a74dc24e02b44280b28f261b777e7a 328 Gene3D G3DSA:3.40.50.2300 134 328 3.2E-37 T 29-03-2018 CVS42_RS00705 85a74dc24e02b44280b28f261b777e7a 328 Gene3D G3DSA:3.40.50.2300 19 133 1.7E-17 T 29-03-2018 CVS42_RS03625 a515691eddee3a2374a611ec45e92fe1 266 Pfam PF11060 Protein of unknown function (DUF2861) 25 259 5.4E-22 T 29-03-2018 IPR021290 Protein of unknown function DUF2861 CVS42_RS02350 5ee7f22b9b51c55cb6278876829a41d2 445 Gene3D G3DSA:2.70.70.10 286 444 1.1E-39 T 29-03-2018 CVS42_RS02350 5ee7f22b9b51c55cb6278876829a41d2 445 Pfam PF01551 Peptidase family M23 318 411 7.6E-31 T 29-03-2018 IPR016047 Peptidase M23 CVS42_RS02350 5ee7f22b9b51c55cb6278876829a41d2 445 SUPERFAMILY SSF51261 168 413 5.75E-71 T 29-03-2018 IPR011055 Duplicated hybrid motif CVS42_RS02350 5ee7f22b9b51c55cb6278876829a41d2 445 Pfam PF04225 Opacity-associated protein A LysM-like domain 96 176 2.0E-9 T 29-03-2018 IPR007340 Opacity-associated protein A CVS42_RS15825 704a0e141568db08a5d96ce1f35b5d90 312 SUPERFAMILY SSF53850 92 301 5.97E-37 T 29-03-2018 CVS42_RS15825 704a0e141568db08a5d96ce1f35b5d90 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.1E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CVS42_RS15825 704a0e141568db08a5d96ce1f35b5d90 312 Pfam PF03466 LysR substrate binding domain 92 297 1.1E-33 T 29-03-2018 IPR005119 LysR, substrate-binding CVS42_RS15825 704a0e141568db08a5d96ce1f35b5d90 312 SUPERFAMILY SSF46785 2 84 1.92E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS15825 704a0e141568db08a5d96ce1f35b5d90 312 Gene3D G3DSA:3.40.190.10 181 268 4.3E-24 T 29-03-2018 CVS42_RS15825 704a0e141568db08a5d96ce1f35b5d90 312 Gene3D G3DSA:3.40.190.10 93 180 1.3E-10 T 29-03-2018 CVS42_RS15825 704a0e141568db08a5d96ce1f35b5d90 312 Gene3D G3DSA:1.10.10.10 1 88 1.3E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS01390 0c22c08ddc01c58d8ea8dfd41ffa40c0 577 Gene3D G3DSA:3.90.76.10 150 246 1.3E-14 T 29-03-2018 CVS42_RS01390 0c22c08ddc01c58d8ea8dfd41ffa40c0 577 SUPERFAMILY SSF53850 127 567 1.99E-61 T 29-03-2018 CVS42_RS01390 0c22c08ddc01c58d8ea8dfd41ffa40c0 577 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 175 323 2.7E-16 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CVS42_RS01390 0c22c08ddc01c58d8ea8dfd41ffa40c0 577 Gene3D G3DSA:1.10.10.10 14 113 1.3E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS01390 0c22c08ddc01c58d8ea8dfd41ffa40c0 577 Pfam PF12793 Sugar transport-related sRNA regulator N-term 15 129 5.7E-36 T 29-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CVS42_RS01390 0c22c08ddc01c58d8ea8dfd41ffa40c0 577 SUPERFAMILY SSF46785 17 106 7.45E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS01390 0c22c08ddc01c58d8ea8dfd41ffa40c0 577 Gene3D G3DSA:3.40.190.10 247 327 1.3E-9 T 29-03-2018 CVS42_RS00560 fe257a7b215e7bbccdfa98b871491425 176 SMART SM01321 9 133 3.8E-29 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CVS42_RS00560 fe257a7b215e7bbccdfa98b871491425 176 SUPERFAMILY SSF143422 1 138 1.15E-29 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CVS42_RS00560 fe257a7b215e7bbccdfa98b871491425 176 Pfam PF01797 Transposase IS200 like 18 131 9.8E-7 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CVS42_RS00560 fe257a7b215e7bbccdfa98b871491425 176 Gene3D G3DSA:3.30.70.1290 2 140 5.8E-31 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CVS42_RS08320 4a54883c5af355e8808e9d9f8312e836 148 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 23 148 4.1E-45 T 29-03-2018 IPR014320 Phage shock protein, PspC CVS42_RS08320 4a54883c5af355e8808e9d9f8312e836 148 Pfam PF04024 PspC domain 23 80 1.9E-17 T 29-03-2018 IPR007168 Phage shock protein, PspC, N-terminal CVS42_RS16465 57b22e1cf3378234b3449d86aad55a2d 295 Pfam PF01963 TraB family 26 285 9.4E-56 T 29-03-2018 IPR002816 Pheromone shutdown, TraB CVS42_RS12890 c7093c9df0f8584229b06eddc0888e23 512 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 182 8.4E-57 T 29-03-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices CVS42_RS12890 c7093c9df0f8584229b06eddc0888e23 512 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 2.4E-110 T 29-03-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase CVS42_RS18135 4c294c41aa3967fcda703746ff81081a 150 SUPERFAMILY SSF54534 4 143 2.55E-33 T 29-03-2018 CVS42_RS18135 4c294c41aa3967fcda703746ff81081a 150 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 141 9.6E-13 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CVS42_RS18135 4c294c41aa3967fcda703746ff81081a 150 Gene3D G3DSA:3.10.50.40 2 150 3.0E-20 T 29-03-2018 CVS42_RS15785 3fd6e7fa3f46f298a4f48db4159ca70e 444 PIRSF PIRSF006060 1 441 2.8E-44 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS15785 3fd6e7fa3f46f298a4f48db4159ca70e 444 Pfam PF13520 Amino acid permease 9 422 4.6E-33 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS13990 547e03537d23ae864a49cf4c02150f72 479 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 27 441 1.3E-95 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CVS42_RS13990 547e03537d23ae864a49cf4c02150f72 479 Gene3D G3DSA:3.40.710.10 12 454 2.6E-34 T 29-03-2018 CVS42_RS13990 547e03537d23ae864a49cf4c02150f72 479 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 43 433 1.1E-94 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CVS42_RS13990 547e03537d23ae864a49cf4c02150f72 479 SUPERFAMILY SSF56601 24 458 1.84E-81 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CVS42_RS13990 547e03537d23ae864a49cf4c02150f72 479 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 276 298 8.9E-28 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CVS42_RS13990 547e03537d23ae864a49cf4c02150f72 479 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 413 426 8.9E-28 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CVS42_RS13990 547e03537d23ae864a49cf4c02150f72 479 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 50 69 8.9E-28 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CVS42_RS13990 547e03537d23ae864a49cf4c02150f72 479 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 349 363 8.9E-28 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CVS42_RS13990 547e03537d23ae864a49cf4c02150f72 479 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 334 348 8.9E-28 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CVS42_RS02990 e226de4dcfae67a0e99359d99bc78370 288 PIRSF PIRSF016020 4 288 7.8E-60 T 29-03-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 CVS42_RS02990 e226de4dcfae67a0e99359d99bc78370 288 Pfam PF01263 Aldose 1-epimerase 22 286 1.4E-41 T 29-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CVS42_RS02990 e226de4dcfae67a0e99359d99bc78370 288 SUPERFAMILY SSF74650 18 285 1.51E-61 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CVS42_RS02990 e226de4dcfae67a0e99359d99bc78370 288 Gene3D G3DSA:2.70.98.10 4 288 1.6E-58 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CVS42_RS00950 37d974f4d4b333d34d6428dc11e6bb57 446 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 444 3.5E-149 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CVS42_RS00950 37d974f4d4b333d34d6428dc11e6bb57 446 PIRSF PIRSF002746 1 446 1.3E-153 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CVS42_RS00950 37d974f4d4b333d34d6428dc11e6bb57 446 Pfam PF02447 GntP family permease 5 442 2.1E-150 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CVS42_RS20895 0271ac1c8e68f4e239f347ca7dffe023 259 Gene3D G3DSA:3.40.190.10 20 140 3.8E-12 T 29-03-2018 CVS42_RS20895 0271ac1c8e68f4e239f347ca7dffe023 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 257 9.5E-22 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS20895 0271ac1c8e68f4e239f347ca7dffe023 259 SUPERFAMILY SSF53850 32 257 3.37E-32 T 29-03-2018 CVS42_RS20895 0271ac1c8e68f4e239f347ca7dffe023 259 Gene3D G3DSA:3.40.190.10 141 209 5.3E-4 T 29-03-2018 CVS42_RS09640 289ceeb73b58c3303694e6cba541fb8b 414 SUPERFAMILY SSF52172 118 239 2.7E-13 T 29-03-2018 IPR011006 CheY-like superfamily CVS42_RS09640 289ceeb73b58c3303694e6cba541fb8b 414 Gene3D G3DSA:3.40.50.2300 114 260 1.2E-14 T 29-03-2018 CVS42_RS09640 289ceeb73b58c3303694e6cba541fb8b 414 Pfam PF00072 Response regulator receiver domain 119 233 1.6E-7 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CVS42_RS19245 088a70198385091e852772c5137cc6d5 165 Pfam PF02470 MlaD protein 39 117 1.7E-19 T 29-03-2018 IPR003399 Mce/MlaD CVS42_RS19245 088a70198385091e852772c5137cc6d5 165 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 153 8.1E-54 T 29-03-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 CVS42_RS12605 c643a397e64ad4940303ab035f6d17cc 165 Gene3D G3DSA:3.40.630.30 2 163 1.9E-32 T 29-03-2018 CVS42_RS12605 c643a397e64ad4940303ab035f6d17cc 165 Pfam PF00583 Acetyltransferase (GNAT) family 39 156 7.1E-19 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS12605 c643a397e64ad4940303ab035f6d17cc 165 SUPERFAMILY SSF55729 13 161 7.81E-33 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS02300 762077d19689fffe08ed2507832920ed 296 Pfam PF00892 EamA-like transporter family 157 281 7.1E-9 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS02300 762077d19689fffe08ed2507832920ed 296 Pfam PF00892 EamA-like transporter family 9 141 2.5E-11 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS02300 762077d19689fffe08ed2507832920ed 296 SUPERFAMILY SSF103481 208 283 5.49E-10 T 29-03-2018 CVS42_RS02300 762077d19689fffe08ed2507832920ed 296 SUPERFAMILY SSF103481 45 141 2.62E-12 T 29-03-2018 CVS42_RS02300 762077d19689fffe08ed2507832920ed 296 TIGRFAM TIGR00688 rarD: protein RarD 9 256 4.1E-43 T 29-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 CVS42_RS04015 f7d4ad15536a8721bedd7b34d799aedf 289 Gene3D G3DSA:1.10.150.200 133 220 1.7E-7 T 29-03-2018 CVS42_RS04015 f7d4ad15536a8721bedd7b34d799aedf 289 Gene3D G3DSA:1.25.40.10 12 125 1.7E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS04015 f7d4ad15536a8721bedd7b34d799aedf 289 SUPERFAMILY SSF48452 78 114 2.33E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS04015 f7d4ad15536a8721bedd7b34d799aedf 289 SUPERFAMILY SSF48452 158 246 2.33E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS04015 f7d4ad15536a8721bedd7b34d799aedf 289 Pfam PF13181 Tetratricopeptide repeat 158 186 4.1E-4 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CVS42_RS09170 571876679c248a7a00b4e049824aa05d 413 SUPERFAMILY SSF118215 12 401 8.24E-108 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS09170 571876679c248a7a00b4e049824aa05d 413 PRINTS PR00173 Glutamate-aspartate symporter signature 355 375 1.6E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS09170 571876679c248a7a00b4e049824aa05d 413 PRINTS PR00173 Glutamate-aspartate symporter signature 144 166 1.6E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS09170 571876679c248a7a00b4e049824aa05d 413 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 1.6E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS09170 571876679c248a7a00b4e049824aa05d 413 PRINTS PR00173 Glutamate-aspartate symporter signature 45 65 1.6E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS09170 571876679c248a7a00b4e049824aa05d 413 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 1.6E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS09170 571876679c248a7a00b4e049824aa05d 413 PRINTS PR00173 Glutamate-aspartate symporter signature 75 100 1.6E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS09170 571876679c248a7a00b4e049824aa05d 413 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 1.6E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS09170 571876679c248a7a00b4e049824aa05d 413 PRINTS PR00173 Glutamate-aspartate symporter signature 227 246 1.6E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS09170 571876679c248a7a00b4e049824aa05d 413 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 1.6E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS09170 571876679c248a7a00b4e049824aa05d 413 Pfam PF00375 Sodium:dicarboxylate symporter family 12 400 5.2E-114 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS09170 571876679c248a7a00b4e049824aa05d 413 Gene3D G3DSA:1.10.3860.10 4 408 1.1E-115 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CVS42_RS13360 d2cb8079eb173c6414edec2a8f30575d 463 Pfam PF00245 Alkaline phosphatase 33 462 1.2E-108 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CVS42_RS13360 d2cb8079eb173c6414edec2a8f30575d 463 SMART SM00098 34 463 1.7E-100 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CVS42_RS13360 d2cb8079eb173c6414edec2a8f30575d 463 PRINTS PR00113 Alkaline phosphatase signature 197 207 8.6E-41 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CVS42_RS13360 d2cb8079eb173c6414edec2a8f30575d 463 PRINTS PR00113 Alkaline phosphatase signature 33 53 8.6E-41 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CVS42_RS13360 d2cb8079eb173c6414edec2a8f30575d 463 PRINTS PR00113 Alkaline phosphatase signature 279 308 8.6E-41 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CVS42_RS13360 d2cb8079eb173c6414edec2a8f30575d 463 PRINTS PR00113 Alkaline phosphatase signature 143 163 8.6E-41 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CVS42_RS13360 d2cb8079eb173c6414edec2a8f30575d 463 SUPERFAMILY SSF53649 12 463 1.01E-132 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CVS42_RS13360 d2cb8079eb173c6414edec2a8f30575d 463 Gene3D G3DSA:3.40.720.10 3 463 4.0E-132 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CVS42_RS18575 c6bae2aa2abb5bba7aaac98d34ee9c99 473 Gene3D G3DSA:2.10.10.20 416 472 5.5E-5 T 29-03-2018 CVS42_RS18575 c6bae2aa2abb5bba7aaac98d34ee9c99 473 Gene3D G3DSA:2.70.50.50 25 192 4.0E-57 T 29-03-2018 CVS42_RS18575 c6bae2aa2abb5bba7aaac98d34ee9c99 473 SUPERFAMILY SSF81296 25 192 2.52E-63 T 29-03-2018 IPR014756 Immunoglobulin E-set CVS42_RS18575 c6bae2aa2abb5bba7aaac98d34ee9c99 473 Gene3D G3DSA:2.60.40.10 302 399 9.0E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS18575 c6bae2aa2abb5bba7aaac98d34ee9c99 473 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 25 188 9.5E-39 T 29-03-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal CVS42_RS05385 d65f6ac3c1b6bf42ed4fbf7d3b6d5c94 450 Gene3D G3DSA:2.170.16.10 44 202 9.7E-18 T 29-03-2018 CVS42_RS05385 d65f6ac3c1b6bf42ed4fbf7d3b6d5c94 450 SUPERFAMILY SSF51294 46 139 8.63E-19 T 29-03-2018 IPR028992 Hedgehog/Intein (Hint) domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CVS42_RS03980 e050ef99162c7ca8d03e5db56e2146a1 219 Pfam PF02311 AraC-like ligand binding domain 11 93 1.9E-4 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CVS42_RS13975 cfe116ea1936fbc9e10656c7d1b6d838 112 PIRSF PIRSF028770 1 112 1.9E-56 T 29-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 CVS42_RS13975 cfe116ea1936fbc9e10656c7d1b6d838 112 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 2.2E-42 T 29-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 CVS42_RS05685 a44c06e94e1dc4a618819fef7440575a 304 SUPERFAMILY SSF55120 35 225 2.56E-46 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS05685 a44c06e94e1dc4a618819fef7440575a 304 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 80 94 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CVS42_RS05685 a44c06e94e1dc4a618819fef7440575a 304 Gene3D G3DSA:3.30.70.580 34 124 1.9E-20 T 29-03-2018 CVS42_RS05685 a44c06e94e1dc4a618819fef7440575a 304 Pfam PF00849 RNA pseudouridylate synthase 45 189 9.0E-18 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CVS42_RS05685 a44c06e94e1dc4a618819fef7440575a 304 Gene3D G3DSA:3.30.70.1560 125 201 1.1E-23 T 29-03-2018 CVS42_RS05685 a44c06e94e1dc4a618819fef7440575a 304 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 49 218 2.3E-56 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CVS42_RS12610 099d46c76fa9fabd56efc6302d292264 212 Pfam PF04391 Protein of unknown function (DUF533) 27 205 3.8E-62 T 29-03-2018 IPR007486 Inner membrane protein YebE CVS42_RS12610 099d46c76fa9fabd56efc6302d292264 212 SUPERFAMILY SSF158682 61 206 8.37E-21 T 29-03-2018 CVS42_RS12610 099d46c76fa9fabd56efc6302d292264 212 Gene3D G3DSA:1.10.3680.10 66 210 2.1E-13 T 29-03-2018 IPR029024 TerB-like CVS42_RS07810 dfbbec185944943054490fd2ad8df941 338 SUPERFAMILY SSF52317 2 157 1.1E-42 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CVS42_RS07810 dfbbec185944943054490fd2ad8df941 338 SUPERFAMILY SSF141986 175 327 2.35E-39 T 29-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain CVS42_RS07810 dfbbec185944943054490fd2ad8df941 338 Gene3D G3DSA:3.40.50.10740 3 166 1.0E-46 T 29-03-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain CVS42_RS07810 dfbbec185944943054490fd2ad8df941 338 Pfam PF02016 LD-carboxypeptidase 15 321 3.4E-70 T 29-03-2018 IPR003507 Peptidase family S66 CVS42_RS07810 dfbbec185944943054490fd2ad8df941 338 Gene3D G3DSA:3.50.30.60 168 338 2.6E-44 T 29-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain CVS42_RS07810 dfbbec185944943054490fd2ad8df941 338 PIRSF PIRSF028757 3 336 9.8E-84 T 29-03-2018 IPR003507 Peptidase family S66 CVS42_RS12865 731aa3c1d66f4dbde14e79e50d5270f0 83 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 2.0E-22 T 29-03-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain CVS42_RS12865 731aa3c1d66f4dbde14e79e50d5270f0 83 SMART SM00834 1 42 1.6E-19 T 29-03-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain CVS42_RS12865 731aa3c1d66f4dbde14e79e50d5270f0 83 Pfam PF09723 Zinc ribbon domain 1 41 3.4E-16 T 29-03-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain CVS42_RS03820 b146d2fe9c9e19362222820697df1b8d 98 Gene3D G3DSA:3.30.70.1060 1 98 6.4E-28 T 29-03-2018 CVS42_RS03820 b146d2fe9c9e19362222820697df1b8d 98 Pfam PF03795 YCII-related domain 1 95 1.1E-27 T 29-03-2018 IPR005545 YCII-related CVS42_RS03820 b146d2fe9c9e19362222820697df1b8d 98 SUPERFAMILY SSF54909 1 98 8.94E-31 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CVS42_RS03080 99c231670508234a0a204ee95e77c184 99 Pfam PF10795 Protein of unknown function (DUF2607) 11 90 2.0E-4 T 29-03-2018 IPR019731 Protein of unknown function DUF2607 CVS42_RS07865 b40bb932e33e94db4a8c42bb3c65660d 809 Pfam PF02687 FtsX-like permease family 719 808 2.1E-9 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CVS42_RS07865 b40bb932e33e94db4a8c42bb3c65660d 809 Pfam PF12704 MacB-like periplasmic core domain 473 653 4.7E-9 T 29-03-2018 IPR025857 MacB-like periplasmic core domain CVS42_RS13875 b7063622da35e27a0511c0d3ededdc41 293 SUPERFAMILY SSF103481 170 273 1.44E-16 T 29-03-2018 CVS42_RS13875 b7063622da35e27a0511c0d3ededdc41 293 Pfam PF00892 EamA-like transporter family 138 269 1.9E-20 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS13875 b7063622da35e27a0511c0d3ededdc41 293 Pfam PF00892 EamA-like transporter family 2 128 9.9E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS13875 b7063622da35e27a0511c0d3ededdc41 293 SUPERFAMILY SSF103481 35 131 6.93E-10 T 29-03-2018 CVS42_RS03435 812e77761e8577727f56223d66418da2 105 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 33.815 T 29-03-2018 IPR023081 Cell division protein FtsB CVS42_RS03435 812e77761e8577727f56223d66418da2 105 Pfam PF04977 Septum formation initiator 11 89 2.1E-23 T 29-03-2018 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 CVS42_RS16040 a2db48a299635fa72639b0b28086106a 285 Pfam PF01148 Cytidylyltransferase family 3 278 3.3E-64 T 29-03-2018 CVS42_RS16040 a2db48a299635fa72639b0b28086106a 285 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 29-03-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 CVS42_RS12580 19bb3d049f77fb2ddc49ceb6113ee6ed 319 SUPERFAMILY SSF56281 37 125 1.62E-40 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS12580 19bb3d049f77fb2ddc49ceb6113ee6ed 319 SUPERFAMILY SSF56281 170 308 1.62E-40 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS12580 19bb3d049f77fb2ddc49ceb6113ee6ed 319 Gene3D G3DSA:3.60.15.10 35 319 4.1E-36 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS12580 19bb3d049f77fb2ddc49ceb6113ee6ed 319 Pfam PF12706 Beta-lactamase superfamily domain 65 276 4.0E-14 T 29-03-2018 IPR001279 Metallo-beta-lactamase CVS42_RS06685 67ef6aa4b4b96910139d43b5dd129e2e 329 Gene3D G3DSA:2.40.160.40 95 329 1.1E-6 T 29-03-2018 CVS42_RS06685 67ef6aa4b4b96910139d43b5dd129e2e 329 Pfam PF04338 Protein of unknown function, DUF481 103 301 1.7E-15 T 29-03-2018 IPR007433 Protein of unknown function DUF481 CVS42_RS13730 ec479773d795f06752f61349fd311511 289 SUPERFAMILY SSF159501 8 180 1.2E-7 T 29-03-2018 CVS42_RS04960 4e670b68c9dd1a0a90b4329f30ae4a9a 198 SUPERFAMILY SSF53178 5 194 1.31E-70 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CVS42_RS04960 4e670b68c9dd1a0a90b4329f30ae4a9a 198 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 29-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CVS42_RS04960 4e670b68c9dd1a0a90b4329f30ae4a9a 198 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.625 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CVS42_RS04960 4e670b68c9dd1a0a90b4329f30ae4a9a 198 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 29-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CVS42_RS04960 4e670b68c9dd1a0a90b4329f30ae4a9a 198 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 192 4.3E-69 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CVS42_RS04960 4e670b68c9dd1a0a90b4329f30ae4a9a 198 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 6.7E-55 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CVS42_RS04960 4e670b68c9dd1a0a90b4329f30ae4a9a 198 Gene3D G3DSA:3.40.50.1470 1 196 1.0E-69 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CVS42_RS10955 d81934641756809083787dd47d086b9a 499 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS10955 d81934641756809083787dd47d086b9a 499 Pfam PF01235 Sodium:alanine symporter family 50 459 3.5E-154 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS10955 d81934641756809083787dd47d086b9a 499 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 447 7.3E-145 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS10955 d81934641756809083787dd47d086b9a 499 PRINTS PR00175 Sodium/alanine symporter signature 295 313 2.8E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS10955 d81934641756809083787dd47d086b9a 499 PRINTS PR00175 Sodium/alanine symporter signature 353 375 2.8E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS10955 d81934641756809083787dd47d086b9a 499 PRINTS PR00175 Sodium/alanine symporter signature 86 108 2.8E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS10955 d81934641756809083787dd47d086b9a 499 PRINTS PR00175 Sodium/alanine symporter signature 204 223 2.8E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS10955 d81934641756809083787dd47d086b9a 499 PRINTS PR00175 Sodium/alanine symporter signature 176 194 2.8E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS10955 d81934641756809083787dd47d086b9a 499 PRINTS PR00175 Sodium/alanine symporter signature 416 436 2.8E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CVS42_RS02835 de5ef7350a9d8637ca66d19ccd0a284c 229 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 5.6E-44 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CVS42_RS02835 de5ef7350a9d8637ca66d19ccd0a284c 229 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 1.5E-89 T 29-03-2018 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 CVS42_RS15860 e4e90e9f5198746005d64573b1dd53c6 373 SUPERFAMILY SSF53067 65 110 6.99E-18 T 29-03-2018 CVS42_RS15860 e4e90e9f5198746005d64573b1dd53c6 373 SUPERFAMILY SSF53067 5 35 6.99E-18 T 29-03-2018 CVS42_RS15860 e4e90e9f5198746005d64573b1dd53c6 373 SUPERFAMILY SSF53067 140 340 6.99E-18 T 29-03-2018 CVS42_RS15860 e4e90e9f5198746005d64573b1dd53c6 373 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 4 373 6.7E-138 T 29-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 CVS42_RS15860 e4e90e9f5198746005d64573b1dd53c6 373 Gene3D G3DSA:3.30.420.40 217 373 9.9E-24 T 29-03-2018 CVS42_RS15860 e4e90e9f5198746005d64573b1dd53c6 373 Gene3D G3DSA:3.30.420.40 2 178 2.4E-57 T 29-03-2018 CVS42_RS15860 e4e90e9f5198746005d64573b1dd53c6 373 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 3 373 41.01 T 29-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 CVS42_RS09075 1bfaa751d18b3b46453c53693b5a277f 296 SUPERFAMILY SSF103481 189 287 2.22E-12 T 29-03-2018 CVS42_RS09075 1bfaa751d18b3b46453c53693b5a277f 296 SUPERFAMILY SSF103481 48 149 3.92E-11 T 29-03-2018 CVS42_RS09075 1bfaa751d18b3b46453c53693b5a277f 296 Pfam PF00892 EamA-like transporter family 155 284 1.2E-10 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS09075 1bfaa751d18b3b46453c53693b5a277f 296 Pfam PF00892 EamA-like transporter family 11 146 4.1E-11 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS10725 909dc3dcd4a42861fcc7b56667eb04c2 439 Pfam PF13440 Polysaccharide biosynthesis protein 31 259 3.1E-15 T 29-03-2018 CVS42_RS06665 f6ef7953686148ead10673f2412e2453 166 SUPERFAMILY SSF54001 43 164 1.08E-40 T 29-03-2018 CVS42_RS06665 f6ef7953686148ead10673f2412e2453 166 Pfam PF00877 NlpC/P60 family 59 163 5.1E-32 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CVS42_RS06665 f6ef7953686148ead10673f2412e2453 166 Gene3D G3DSA:3.90.1720.10 43 165 2.3E-38 T 29-03-2018 CVS42_RS11230 abfd7214836acb3ffe5c1b354a3fbc56 232 Gene3D G3DSA:1.20.1580.10 42 231 9.3E-8 T 29-03-2018 CVS42_RS11230 abfd7214836acb3ffe5c1b354a3fbc56 232 TIGRFAM TIGR02642 phage_xxxx: uncharacterized phage protein 1 230 1.3E-60 T 29-03-2018 IPR013464 Conserved hypothetical protein CHP02642 CVS42_RS11230 abfd7214836acb3ffe5c1b354a3fbc56 232 SUPERFAMILY SSF57938 150 185 2.88E-6 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CVS42_RS07840 33727f7447082f5e84b291fb926f429a 111 Pfam PF12290 Protein of unknown function (DUF3802) 1 110 1.9E-46 T 29-03-2018 IPR020979 Uncharacterised protein family A0KLC6 CVS42_RS17610 68435ffcc1e5013e16dfd74816c256fb 150 Gene3D G3DSA:2.60.40.10 33 150 4.5E-12 T 29-03-2018 IPR013783 Immunoglobulin-like fold CVS42_RS12805 529585ca27c085d12e29fa1016c9ef84 149 Pfam PF04191 Phospholipid methyltransferase 35 138 1.7E-14 T 29-03-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 CVS42_RS12805 529585ca27c085d12e29fa1016c9ef84 149 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 103 148 3.0E-6 T 29-03-2018 CVS42_RS17410 f49d4f7f5ebb3024a04b3516538b0d94 146 Pfam PF04217 Protein of unknown function, DUF412 8 144 3.5E-55 T 29-03-2018 IPR007334 Uncharacterised protein family UPF0208 CVS42_RS11345 42fc998e4e64115696baaa31f744005a 352 Pfam PF03837 RecT family 41 225 2.2E-33 T 29-03-2018 IPR018330 RecT family GO:0003677|GO:0006259 CVS42_RS08380 2b1bc12bff5f1669a2fce0af79609d28 92 Pfam PF08891 YfcL protein 5 88 7.4E-32 T 29-03-2018 IPR014987 Uncharacterised protein family YfcL CVS42_RS20625 5354d918367da87b60662894dbe6694c 238 Gene3D G3DSA:1.10.10.60 147 237 0.003 T 29-03-2018 CVS42_RS20625 5354d918367da87b60662894dbe6694c 238 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 27 139 2.0E-37 T 29-03-2018 IPR013559 YheO-like CVS42_RS20625 5354d918367da87b60662894dbe6694c 238 Pfam PF08348 YheO-like PAS domain 28 136 1.3E-36 T 29-03-2018 IPR013559 YheO-like CVS42_RS20625 5354d918367da87b60662894dbe6694c 238 Pfam PF13309 HTH domain 171 228 1.4E-17 T 29-03-2018 CVS42_RS07485 2dd05e455754da434a79e7439d70fe03 373 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 342 2.3E-86 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CVS42_RS07485 2dd05e455754da434a79e7439d70fe03 373 SUPERFAMILY SSF51395 1 365 5.19E-121 T 29-03-2018 CVS42_RS07485 2dd05e455754da434a79e7439d70fe03 373 Gene3D G3DSA:3.20.20.70 1 373 1.2E-121 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CVS42_RS18965 6e4db057d8f2fd2363a5319fd5a47b5b 129 PIRSF PIRSF002889 1 129 1.4E-32 T 29-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CVS42_RS18965 6e4db057d8f2fd2363a5319fd5a47b5b 129 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 127 9.6E-29 T 29-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CVS42_RS16245 819215251b5123aac4539f80234181b1 195 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 21 158 6.6E-43 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CVS42_RS16245 819215251b5123aac4539f80234181b1 195 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 55 72 - T 29-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CVS42_RS16245 819215251b5123aac4539f80234181b1 195 SUPERFAMILY SSF50891 18 179 4.68E-47 T 29-03-2018 IPR029000 Cyclophilin-like domain CVS42_RS16245 819215251b5123aac4539f80234181b1 195 Gene3D G3DSA:2.40.100.10 15 194 1.8E-47 T 29-03-2018 IPR029000 Cyclophilin-like domain CVS42_RS16245 819215251b5123aac4539f80234181b1 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 133 148 1.2E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CVS42_RS16245 819215251b5123aac4539f80234181b1 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 34 49 1.2E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CVS42_RS16245 819215251b5123aac4539f80234181b1 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 60 72 1.2E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CVS42_RS09435 f9b9ffada5e91146b4baab658aeaffa0 171 PIRSF PIRSF004982 1 171 5.0E-55 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CVS42_RS09435 f9b9ffada5e91146b4baab658aeaffa0 171 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 2 165 4.5E-31 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CVS42_RS09435 f9b9ffada5e91146b4baab658aeaffa0 171 Pfam PF03843 Outer membrane lipoprotein Slp family 15 162 4.0E-44 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CVS42_RS10180 51925d0d8d6180261ef3bbbc67029edb 185 Gene3D G3DSA:3.10.450.50 16 185 2.7E-12 T 29-03-2018 CVS42_RS10180 51925d0d8d6180261ef3bbbc67029edb 185 SUPERFAMILY SSF54427 122 182 1.14E-6 T 29-03-2018 IPR032710 NTF2-like domain CVS42_RS10180 51925d0d8d6180261ef3bbbc67029edb 185 PIRSF PIRSF028288 4 185 2.3E-82 T 29-03-2018 IPR016878 Uncharacterised conserved protein UCP028288 CVS42_RS21805 de3cf80a79b32630c1543176e28220b6 164 Pfam PF10517 Electron transfer DM13 62 157 1.9E-18 T 29-03-2018 IPR019545 DM13 domain CVS42_RS14575 474db60569e29c19a886e8f65d084538 186 Gene3D G3DSA:3.40.50.150 5 181 2.4E-8 T 29-03-2018 CVS42_RS14575 474db60569e29c19a886e8f65d084538 186 SUPERFAMILY SSF53335 14 137 3.28E-8 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CVS42_RS16130 fcb9b6744251ac6b66939012614f9dff 78 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 1.5E-25 T 29-03-2018 IPR021250 Protein of unknown function DUF2789 CVS42_RS08970 2c20578429d8591b66fe9fd31c280189 215 Pfam PF09335 SNARE associated Golgi protein 49 174 3.5E-23 T 29-03-2018 IPR032816 SNARE associated Golgi protein CVS42_RS14680 be2ab24a3bee87bf500ecdc9af78da49 306 Gene3D G3DSA:1.10.10.580 228 291 6.2E-11 T 29-03-2018 CVS42_RS14680 be2ab24a3bee87bf500ecdc9af78da49 306 Pfam PF02616 Segregation and condensation protein ScpA 79 289 7.8E-26 T 29-03-2018 IPR003768 Segregation and condensation protein A CVS42_RS14680 be2ab24a3bee87bf500ecdc9af78da49 306 Hamap MF_01805 Segregation and condensation protein A [scpA]. 62 295 20.389 T 29-03-2018 IPR003768 Segregation and condensation protein A CVS42_RS12595 f03355e243fb16243cc24f5e176f156c 523 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 10 504 2.5E-169 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CVS42_RS12595 f03355e243fb16243cc24f5e176f156c 523 PIRSF PIRSF006446 3 522 3.8E-144 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CVS42_RS18900 54a1974208e857fca2e947eb56584faa 127 Pfam PF00700 Bacterial flagellin C-terminal helical region 43 126 1.8E-26 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CVS42_RS18900 54a1974208e857fca2e947eb56584faa 127 SUPERFAMILY SSF64518 7 127 1.18E-29 T 29-03-2018 CVS42_RS18900 54a1974208e857fca2e947eb56584faa 127 Gene3D G3DSA:1.20.1330.10 3 99 3.9E-22 T 29-03-2018 CVS42_RS09890 208b9762c48ccbd08daeede2ba2da0a1 130 Gene3D G3DSA:1.10.260.40 4 77 2.4E-4 T 29-03-2018 CVS42_RS17400 6b6450ab35a1aba4c9332c06b5e43798 154 SUPERFAMILY SSF52833 3 153 1.46E-48 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS17400 6b6450ab35a1aba4c9332c06b5e43798 154 Pfam PF00578 AhpC/TSA family 7 134 6.1E-39 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CVS42_RS17400 6b6450ab35a1aba4c9332c06b5e43798 154 PIRSF PIRSF000239 1 142 2.8E-17 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CVS42_RS17400 6b6450ab35a1aba4c9332c06b5e43798 154 Gene3D G3DSA:3.40.30.10 1 153 8.3E-42 T 29-03-2018 CVS42_RS05250 0d5328b1eb91387a26a039438621c6ac 159 SUPERFAMILY SSF55729 1 150 3.55E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CVS42_RS05250 0d5328b1eb91387a26a039438621c6ac 159 Gene3D G3DSA:3.40.630.30 1 150 1.8E-25 T 29-03-2018 CVS42_RS05250 0d5328b1eb91387a26a039438621c6ac 159 Pfam PF00583 Acetyltransferase (GNAT) family 49 146 7.7E-12 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CVS42_RS00670 fe5a00db9583b7a66ee3e2acee94dec5 271 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 262 1.3E-93 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CVS42_RS00670 fe5a00db9583b7a66ee3e2acee94dec5 271 Pfam PF02673 Bacitracin resistance protein BacA 10 263 2.5E-85 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CVS42_RS00670 fe5a00db9583b7a66ee3e2acee94dec5 271 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 269 18.315 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CVS42_RS05645 2ec9d5fd82bd8cbac3875b0df816c37f 262 Pfam PF04333 MlaA lipoprotein 40 230 2.3E-61 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CVS42_RS05645 2ec9d5fd82bd8cbac3875b0df816c37f 262 PRINTS PR01805 VacJ lipoprotein signature 146 163 6.4E-21 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CVS42_RS05645 2ec9d5fd82bd8cbac3875b0df816c37f 262 PRINTS PR01805 VacJ lipoprotein signature 41 54 6.4E-21 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CVS42_RS05645 2ec9d5fd82bd8cbac3875b0df816c37f 262 PRINTS PR01805 VacJ lipoprotein signature 110 127 6.4E-21 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CVS42_RS05645 2ec9d5fd82bd8cbac3875b0df816c37f 262 PRINTS PR01805 VacJ lipoprotein signature 59 75 6.4E-21 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CVS42_RS20330 b4d0adcbf571e9b306862b7914bef9a3 287 SUPERFAMILY SSF53067 42 143 1.14E-6 T 29-03-2018 CVS42_RS14095 2a3c33c2cc694f795b6ad10f805930a8 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 117 231 1.5E-8 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS14095 2a3c33c2cc694f795b6ad10f805930a8 251 Gene3D G3DSA:3.40.190.10 18 249 1.5E-14 T 29-03-2018 CVS42_RS14095 2a3c33c2cc694f795b6ad10f805930a8 251 SUPERFAMILY SSF53850 19 239 1.09E-24 T 29-03-2018 CVS42_RS22095 451142ef93161f3cdd2be72c31485286 159 Pfam PF07603 Protein of unknown function (DUF1566) 31 156 1.4E-17 T 29-03-2018 IPR011460 Protein of unknown function DUF1566 CVS42_RS21445 6529791e46c558cd867f9e9d5bfcc46e 179 SUPERFAMILY SSF51161 6 176 6.24E-44 T 29-03-2018 IPR011004 Trimeric LpxA-like CVS42_RS21445 6529791e46c558cd867f9e9d5bfcc46e 179 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 3.1E-8 T 29-03-2018 IPR001451 Hexapeptide repeat CVS42_RS21445 6529791e46c558cd867f9e9d5bfcc46e 179 Gene3D G3DSA:2.160.10.10 3 179 8.8E-37 T 29-03-2018 CVS42_RS19930 11273cee4ae4d4edf930eebbc71a2a9e 209 SUPERFAMILY SSF101473 3 205 2.49E-59 T 29-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CVS42_RS19930 11273cee4ae4d4edf930eebbc71a2a9e 209 Pfam PF02734 DAK2 domain 32 204 4.1E-57 T 29-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CVS42_RS19930 11273cee4ae4d4edf930eebbc71a2a9e 209 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 8 204 1.2E-76 T 29-03-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 CVS42_RS19930 11273cee4ae4d4edf930eebbc71a2a9e 209 SMART SM01120 31 205 2.9E-82 T 29-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CVS42_RS02790 d1f1d2ea6e2f524c91d31ff70a80df3a 202 Pfam PF01810 LysE type translocator 14 200 7.4E-37 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CVS42_RS02790 d1f1d2ea6e2f524c91d31ff70a80df3a 202 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 8.4E-70 T 29-03-2018 IPR004777 L-lysine exporter/arginine exporter GO:0016021 CVS42_RS21105 8b7c14903aa244202f9718e75fcdf490 193 Pfam PF13511 Domain of unknown function (DUF4124) 12 56 3.3E-13 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 CVS42_RS15595 8e3c58de40a2b90bbfc4235c42f2dd6c 438 Pfam PF03390 2-hydroxycarboxylate transporter family 22 431 6.0E-145 T 29-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 CVS42_RS15595 8e3c58de40a2b90bbfc4235c42f2dd6c 438 PIRSF PIRSF005348 3 438 6.1E-159 T 29-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 CVS42_RS03695 544b812554068a543aa7b5db3f12f19f 434 Pfam PF01266 FAD dependent oxidoreductase 37 390 1.3E-51 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CVS42_RS03695 544b812554068a543aa7b5db3f12f19f 434 SUPERFAMILY SSF51905 36 260 8.85E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS03695 544b812554068a543aa7b5db3f12f19f 434 SUPERFAMILY SSF51905 352 423 8.85E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS03695 544b812554068a543aa7b5db3f12f19f 434 Gene3D G3DSA:3.50.50.60 24 407 2.4E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CVS42_RS01685 43aa9739e31d5f9873d499d8d353ec9a 61 Gene3D G3DSA:1.10.260.40 1 60 1.2E-19 T 29-03-2018 CVS42_RS01685 43aa9739e31d5f9873d499d8d353ec9a 61 Pfam PF14549 DNA-binding transcriptional regulator Cro 3 60 3.3E-24 T 29-03-2018 CVS42_RS01685 43aa9739e31d5f9873d499d8d353ec9a 61 SUPERFAMILY SSF47413 1 56 2.44E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CVS42_RS02400 d0f78293d4444d204f5047533f665fbc 128 Gene3D G3DSA:2.40.50.200 12 117 2.4E-29 T 29-03-2018 CVS42_RS02400 d0f78293d4444d204f5047533f665fbc 128 SUPERFAMILY SSF101756 13 114 2.09E-32 T 29-03-2018 IPR005220 Bacterial OB-fold CVS42_RS02400 d0f78293d4444d204f5047533f665fbc 128 Pfam PF04076 Bacterial OB fold (BOF) protein 24 114 1.5E-27 T 29-03-2018 IPR005220 Bacterial OB-fold CVS42_RS01940 11d3c326c08d0023ae14141f93224495 655 SUPERFAMILY SSF56935 31 649 4.27E-86 T 29-03-2018 CVS42_RS01940 11d3c326c08d0023ae14141f93224495 655 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 47 649 3.5E-168 T 29-03-2018 IPR010100 TonB-dependent copper receptor CVS42_RS01940 11d3c326c08d0023ae14141f93224495 655 Pfam PF00593 TonB dependent receptor 194 648 1.6E-38 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS01940 11d3c326c08d0023ae14141f93224495 655 Gene3D G3DSA:2.40.170.20 156 649 1.3E-51 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CVS42_RS01940 11d3c326c08d0023ae14141f93224495 655 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 143 1.3E-7 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS01940 11d3c326c08d0023ae14141f93224495 655 Gene3D G3DSA:2.170.130.10 21 155 4.2E-9 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CVS42_RS02430 04a54a4640d928fef3b2ce81c30917e9 167 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 9 161 2.1E-53 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CVS42_RS02430 04a54a4640d928fef3b2ce81c30917e9 167 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 10 160 1.3E-55 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CVS42_RS02430 04a54a4640d928fef3b2ce81c30917e9 167 PIRSF PIRSF028301 3 167 4.3E-60 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CVS42_RS09650 38af92ea567e7360610f77e3ca580801 257 SUPERFAMILY SSF52467 6 234 1.36E-73 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CVS42_RS09650 38af92ea567e7360610f77e3ca580801 257 Gene3D G3DSA:3.40.50.1220 2 249 1.8E-52 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CVS42_RS09650 38af92ea567e7360610f77e3ca580801 257 Pfam PF02146 Sir2 family 13 186 1.9E-50 T 29-03-2018 IPR003000 Sirtuin family GO:0070403 CVS42_RS09650 38af92ea567e7360610f77e3ca580801 257 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 58.025 T 29-03-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 CVS42_RS13860 280e65cd665521005504ccdc9f39e4e4 204 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 1.2E-8 T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CVS42_RS13860 280e65cd665521005504ccdc9f39e4e4 204 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CVS42_RS07535 a5550f249cd4c2f7c7bd97071b4d2e8b 243 Pfam PF04402 Protein of unknown function (DUF541) 34 240 1.9E-39 T 29-03-2018 IPR007497 Protein of unknown function DUF541 CVS42_RS13830 b4b1e14d782d0ff898c8e9f4f5224df4 224 Pfam PF07386 Protein of unknown function (DUF1499) 84 210 1.5E-26 T 29-03-2018 IPR010865 Protein of unknown function DUF1499 CVS42_RS15385 a4f179ae24769aaaf562b50245435301 550 Gene3D G3DSA:3.40.50.300 1 510 5.5E-11 T 29-03-2018 CVS42_RS15385 a4f179ae24769aaaf562b50245435301 550 SUPERFAMILY SSF52540 311 400 1.59E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS15385 a4f179ae24769aaaf562b50245435301 550 SUPERFAMILY SSF52540 139 203 1.59E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS15385 a4f179ae24769aaaf562b50245435301 550 SUPERFAMILY SSF52540 18 107 1.59E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS13080 4d39778bef8a2d5ef3295771bbf9157c 248 Gene3D G3DSA:3.40.50.150 45 236 2.5E-5 T 29-03-2018 CVS42_RS14735 cefea1377f9b2c76a4a6329425f82160 175 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 168 1.3E-35 T 29-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CVS42_RS16870 fe4a8c7ea590067a150ada8d51f3c208 475 SUPERFAMILY SSF55604 381 450 3.66E-12 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CVS42_RS16870 fe4a8c7ea590067a150ada8d51f3c208 475 Gene3D G3DSA:3.30.1360.60 378 453 1.0E-12 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CVS42_RS16870 fe4a8c7ea590067a150ada8d51f3c208 475 Pfam PF02378 Phosphotransferase system, EIIC 20 294 7.3E-37 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CVS42_RS16870 fe4a8c7ea590067a150ada8d51f3c208 475 Pfam PF00367 phosphotransferase system, EIIB 383 415 2.7E-7 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CVS42_RS16870 fe4a8c7ea590067a150ada8d51f3c208 475 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 393 410 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CVS42_RS10485 64b716e067f2a00bf8c49bcb2759dc0d 228 Pfam PF04172 LrgB-like family 10 222 1.0E-73 T 29-03-2018 IPR007300 CidB/LrgB family CVS42_RS04455 a8656e372dece0e9b862a13618f1f33f 446 SUPERFAMILY SSF111283 3 446 9.55E-86 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CVS42_RS04455 a8656e372dece0e9b862a13618f1f33f 446 Gene3D G3DSA:3.30.2290.10 1 215 6.5E-35 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CVS42_RS04455 a8656e372dece0e9b862a13618f1f33f 446 Pfam PF01523 Putative modulator of DNA gyrase 23 311 6.8E-38 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CVS42_RS06890 93ac491621167d6e20cc28ee659f427f 71 Gene3D G3DSA:1.10.287.40 2 70 3.8E-4 T 29-03-2018 CVS42_RS06890 93ac491621167d6e20cc28ee659f427f 71 Pfam PF04325 Protein of unknown function (DUF465) 19 66 2.9E-14 T 29-03-2018 IPR007420 Protein of unknown function DUF465 CVS42_RS15680 2f0a15292580330ac213771ac02beca2 83 Gene3D G3DSA:3.30.1450.10 12 82 4.8E-14 T 29-03-2018 CVS42_RS02820 ac6508697c14be19c68ff2d8955e94b1 38 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 6.3E-20 T 29-03-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 CVS42_RS02820 ac6508697c14be19c68ff2d8955e94b1 38 Pfam PF08173 Membrane bound YbgT-like protein 1 26 5.7E-17 T 29-03-2018 IPR012994 Membrane bound YbgT-like CVS42_RS05115 4c8b8731d8bd5e4f3fc72bbb8554badb 453 Pfam PF01136 Peptidase family U32 75 343 1.3E-96 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CVS42_RS05115 4c8b8731d8bd5e4f3fc72bbb8554badb 453 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CVS42_RS05115 4c8b8731d8bd5e4f3fc72bbb8554badb 453 Pfam PF16325 Peptidase family U32 C-terminal domain 358 438 2.0E-21 T 29-03-2018 IPR032525 Peptidase family U32, C-terminal CVS42_RS01970 3e9517b94a4153f62a375f00f4f1b7aa 490 Pfam PF03577 Peptidase family C69 23 400 2.7E-92 T 29-03-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 CVS42_RS01970 3e9517b94a4153f62a375f00f4f1b7aa 490 Gene3D G3DSA:3.60.60.10 24 346 3.0E-45 T 29-03-2018 CVS42_RS06460 e618908ac99c4f57522629f31bcf1714 251 Pfam PF00899 ThiF family 13 245 5.0E-62 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CVS42_RS06460 e618908ac99c4f57522629f31bcf1714 251 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 9 248 7.2E-117 T 29-03-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 CVS42_RS06460 e618908ac99c4f57522629f31bcf1714 251 Gene3D G3DSA:3.40.50.720 2 250 2.8E-72 T 29-03-2018 CVS42_RS06460 e618908ac99c4f57522629f31bcf1714 251 SUPERFAMILY SSF69572 5 249 1.7E-83 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CVS42_RS18370 318c6ec1182b87fdf18523fe374e1386 139 Pfam PF14467 Domain of unknown function (DUF4426) 24 139 3.7E-44 T 29-03-2018 IPR025218 Domain of unknown function DUF4426 CVS42_RS21985 4d2266f767cf0c712c7ae490061aef00 202 Pfam PF02036 SCP-2 sterol transfer family 15 111 5.4E-18 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CVS42_RS21985 4d2266f767cf0c712c7ae490061aef00 202 SUPERFAMILY SSF55718 13 118 1.1E-5 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CVS42_RS10305 6c7563acf6fb63102f5f58e500a539c4 506 Pfam PF04293 SpoVR like protein 16 446 2.4E-174 T 29-03-2018 IPR007390 Sporulation stage V, protein R CVS42_RS17985 31b9eed75cc479ea3c5178e797279d83 792 Pfam PF07238 PilZ domain 144 203 2.3E-6 T 29-03-2018 IPR009875 PilZ domain GO:0035438 CVS42_RS17985 31b9eed75cc479ea3c5178e797279d83 792 SUPERFAMILY SSF141371 144 201 5.49E-6 T 29-03-2018 CVS42_RS17985 31b9eed75cc479ea3c5178e797279d83 792 SUPERFAMILY SSF141371 474 530 9.02E-7 T 29-03-2018 CVS42_RS17985 31b9eed75cc479ea3c5178e797279d83 792 Gene3D G3DSA:2.40.10.220 469 604 1.4E-9 T 29-03-2018 CVS42_RS17985 31b9eed75cc479ea3c5178e797279d83 792 Gene3D G3DSA:2.40.10.220 143 265 2.9E-10 T 29-03-2018 CVS42_RS15195 094a03638c26132b736fcbde39a464d6 494 Pfam PF13148 Protein of unknown function (DUF3987) 47 410 1.1E-88 T 29-03-2018 IPR025048 Protein of unknown function DUF3987) CVS42_RS17970 8e1935e9e0e130254ad0eb3647657089 160 PIRSF PIRSF016548 1 160 7.1E-50 T 29-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 CVS42_RS17970 8e1935e9e0e130254ad0eb3647657089 160 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 150 5.5E-53 T 29-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 CVS42_RS12290 d3ebfcd14967adaf7fac0e42a3879972 172 Pfam PF14345 GDYXXLXY protein 18 157 1.1E-33 T 29-03-2018 IPR025833 GDYXXLXY protein CVS42_RS17960 7187da215ccdd8dc97798abc25b68192 147 Pfam PF05232 Chlorhexidine efflux transporter 79 139 2.4E-17 T 29-03-2018 IPR007896 Chlorhexidine efflux transporter CVS42_RS17960 7187da215ccdd8dc97798abc25b68192 147 Pfam PF05232 Chlorhexidine efflux transporter 7 66 1.6E-17 T 29-03-2018 IPR007896 Chlorhexidine efflux transporter CVS42_RS18115 6eaf925a87c0173795528e2799993a2c 366 Pfam PF16074 Type IV Pilus-assembly protein W 253 363 1.1E-17 T 29-03-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 CVS42_RS03115 2738178bc465a764b537f58c0248dcce 128 SUPERFAMILY SSF103481 12 112 1.83E-12 T 29-03-2018 CVS42_RS03115 2738178bc465a764b537f58c0248dcce 128 Pfam PF00893 Small Multidrug Resistance protein 11 100 1.5E-15 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CVS42_RS17495 031e6628121fb24c24abd836ef231a4b 272 Pfam PF11299 Protein of unknown function (DUF3100) 25 264 1.4E-75 T 29-03-2018 IPR021450 Protein of unknown function DUF3100 CVS42_RS17495 031e6628121fb24c24abd836ef231a4b 272 Gene3D G3DSA:1.20.1250.20 8 266 5.2E-6 T 29-03-2018 CVS42_RS13370 98c6c9cbb87e00866e98b9ce72fb7a24 245 SUPERFAMILY SSF53850 24 239 5.7E-29 T 29-03-2018 CVS42_RS13370 98c6c9cbb87e00866e98b9ce72fb7a24 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 239 4.0E-18 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CVS42_RS13370 98c6c9cbb87e00866e98b9ce72fb7a24 245 Gene3D G3DSA:3.40.190.10 16 244 1.6E-18 T 29-03-2018 CVS42_RS04100 f38a5f4656b56fc949be3e4ace12cff9 184 SUPERFAMILY SSF52499 3 176 4.19E-44 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CVS42_RS04100 f38a5f4656b56fc949be3e4ace12cff9 184 Gene3D G3DSA:3.40.50.850 1 180 9.2E-43 T 29-03-2018 CVS42_RS04100 f38a5f4656b56fc949be3e4ace12cff9 184 Pfam PF00857 Isochorismatase family 3 148 6.3E-36 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CVS42_RS10190 b6619300e1dc3aac2a7cd464ea6237e7 216 SUPERFAMILY SSF53850 37 214 3.14E-6 T 29-03-2018 CVS42_RS15675 a99a9983f3fb78dd4ce53172497c8b77 204 Pfam PF03458 UPF0126 domain 5 76 2.2E-18 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 CVS42_RS15675 a99a9983f3fb78dd4ce53172497c8b77 204 Pfam PF03458 UPF0126 domain 90 162 1.2E-18 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 CVS42_RS03210 8449b7c57967a01e73ef5529a1645aa7 257 PIRSF PIRSF006648 14 254 2.4E-22 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CVS42_RS03210 8449b7c57967a01e73ef5529a1645aa7 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 3.0E-10 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CVS42_RS03210 8449b7c57967a01e73ef5529a1645aa7 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 177 196 3.0E-10 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CVS42_RS03210 8449b7c57967a01e73ef5529a1645aa7 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 59 81 3.0E-10 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CVS42_RS03210 8449b7c57967a01e73ef5529a1645aa7 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 3.0E-10 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CVS42_RS03210 8449b7c57967a01e73ef5529a1645aa7 257 Pfam PF01061 ABC-2 type transporter 10 219 4.5E-38 T 29-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CVS42_RS06075 30997e6010cbe82938b6ffbc033c1def 186 Pfam PF04970 Lecithin retinol acyltransferase 4 104 5.2E-21 T 29-03-2018 IPR007053 LRAT-like domain CVS42_RS05790 e9e75f7a4d79664a6445696b1e12f1cc 153 Pfam PF07321 Type III secretion protein YscO 3 149 1.3E-32 T 29-03-2018 IPR009929 Type III secretion sytem,YscO CVS42_RS01825 d750504037d30061a471a33166f1a928 390 Gene3D G3DSA:1.20.1250.20 120 390 2.9E-4 T 29-03-2018 CVS42_RS02930 6d5a02a7adc47688bae523031678fccc 207 SUPERFAMILY SSF46785 6 184 1.58E-33 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS02930 6d5a02a7adc47688bae523031678fccc 207 Gene3D G3DSA:1.10.10.10 1 75 1.4E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS08860 f6196c2bc36d5bacd59d68c95e3e1159 330 Pfam PF03595 Voltage-dependent anion channel 21 306 1.1E-30 T 29-03-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 CVS42_RS17130 66bcbeb83fb036a8ed9744fe9d05d419 130 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 125 26.459 T 29-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 CVS42_RS17130 66bcbeb83fb036a8ed9744fe9d05d419 130 Pfam PF07417 Transcriptional regulator Crl 4 119 1.3E-47 T 29-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 CVS42_RS01870 5d77379922e38f86c1a628d25fa7fc44 1110 Gene3D G3DSA:3.40.50.300 22 761 0.0011 T 29-03-2018 CVS42_RS21390 a369b74cabf6c31879a058d4bd0e1129 481 Pfam PF13520 Amino acid permease 11 439 1.4E-28 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS21390 a369b74cabf6c31879a058d4bd0e1129 481 PIRSF PIRSF006060 1 475 2.5E-51 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CVS42_RS09740 a37d5d3d13f160739e91aa716a1836bc 228 Pfam PF11205 Protein of unknown function (DUF2987) 31 171 6.3E-43 T 29-03-2018 IPR021370 Protein of unknown function DUF2987 CVS42_RS06805 4452ff1447d736c9e75b2adad0479ec5 117 Pfam PF11604 Copper binding periplasmic protein CusF 50 116 2.4E-26 T 29-03-2018 IPR021647 Copper binding periplasmic protein CusF CVS42_RS05325 dcb8fca446cecff0b9af24404e407220 192 Pfam PF11749 Protein of unknown function (DUF3305) 31 139 6.9E-18 T 29-03-2018 IPR021736 Protein of unknown function DUF3305 CVS42_RS11835 409884c7e535afa2fc44294494f87d2d 526 Pfam PF03553 Na+/H+ antiporter family 165 491 3.0E-87 T 29-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CVS42_RS20780 cb362d59304d9ae730ded761ce8b36ea 208 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 5 202 20.268 T 29-03-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 CVS42_RS20780 cb362d59304d9ae730ded761ce8b36ea 208 Pfam PF01794 Ferric reductase like transmembrane component 53 161 2.3E-16 T 29-03-2018 IPR013130 Ferric reductase transmembrane component-like domain CVS42_RS06305 c72c0a566e8f43cdd22e42e7f06e9547 144 Gene3D G3DSA:3.30.530.20 1 144 7.1E-33 T 29-03-2018 IPR023393 START-like domain CVS42_RS06305 c72c0a566e8f43cdd22e42e7f06e9547 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 13 134 1.1E-31 T 29-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 CVS42_RS06305 c72c0a566e8f43cdd22e42e7f06e9547 144 SUPERFAMILY SSF55961 1 143 4.18E-34 T 29-03-2018 CVS42_RS02855 466b595424261035e925a8ffe88ad83c 174 SUPERFAMILY SSF103088 60 173 9.68E-34 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS02855 466b595424261035e925a8ffe88ad83c 174 Gene3D G3DSA:3.30.1330.60 50 174 1.1E-33 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS02855 466b595424261035e925a8ffe88ad83c 174 ProSitePatterns PS01068 OmpA-like domain. 106 150 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CVS42_RS02855 466b595424261035e925a8ffe88ad83c 174 PRINTS PR01021 OMPA domain signature 119 135 6.8E-16 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS02855 466b595424261035e925a8ffe88ad83c 174 PRINTS PR01021 OMPA domain signature 104 119 6.8E-16 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS02855 466b595424261035e925a8ffe88ad83c 174 PRINTS PR01021 OMPA domain signature 74 96 6.8E-16 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CVS42_RS02855 466b595424261035e925a8ffe88ad83c 174 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 72 174 9.6E-44 T 29-03-2018 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 CVS42_RS02855 466b595424261035e925a8ffe88ad83c 174 Pfam PF00691 OmpA family 73 168 4.6E-22 T 29-03-2018 IPR006665 OmpA-like domain CVS42_RS01530 9c021b41b815e20880f9874d3b3deb6b 251 Pfam PF12571 Phage tail-collar fibre protein 3 150 7.6E-25 T 29-03-2018 IPR022225 Phage tail fibre protein CVS42_RS07235 8863aebdda305d1becc7dbebdbfbe0d2 356 Pfam PF03773 Predicted permease 10 353 2.1E-52 T 29-03-2018 IPR005524 Predicted permease DUF318 CVS42_RS16530 cb6d37986ed52599f5bfa516a85b3e43 202 Pfam PF01810 LysE type translocator 15 202 4.2E-32 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CVS42_RS16530 cb6d37986ed52599f5bfa516a85b3e43 202 PIRSF PIRSF006324 1 202 1.7E-46 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CVS42_RS01625 9abac1af0e31f7a34417b2403d5e1eae 84 Pfam PF04606 Ogr/Delta-like zinc finger 5 48 9.9E-12 T 29-03-2018 IPR007684 Zinc finger, Ogr/Delta-type CVS42_RS00365 085c9eeed21666f62c37eedb8d619205 308 Pfam PF05982 Na+-dependent bicarbonate transporter superfamily 5 303 5.2E-109 T 29-03-2018 IPR010293 Na+-dependent bicarbonate transporter superfamily CVS42_RS07325 a3d21db127472693e87acc0a7c609b70 268 Pfam PF06629 MltA-interacting protein MipA 51 266 3.6E-37 T 29-03-2018 IPR010583 MltA-interacting MipA CVS42_RS07325 a3d21db127472693e87acc0a7c609b70 268 Gene3D G3DSA:2.40.160.20 55 266 9.5E-4 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS15380 03d24b80470e0f3382b675a2e50e7d66 362 Pfam PF14130 Domain of unknown function (DUF4297) 13 217 8.0E-50 T 29-03-2018 IPR025382 Domain of unknown function DUF4297 CVS42_RS16370 105294fd00ecaf131a6268e855f2f036 190 Pfam PF11355 Protein of unknown function (DUF3157) 8 172 2.9E-34 T 29-03-2018 IPR021501 Protein of unknown function DUF3157 CVS42_RS12125 18460c3dcfe4940fbc9e0e3857adc6f9 322 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 208 221 - T 29-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12125 18460c3dcfe4940fbc9e0e3857adc6f9 322 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 53 68 - T 29-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12125 18460c3dcfe4940fbc9e0e3857adc6f9 322 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 7 320 24.032 T 29-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS12125 18460c3dcfe4940fbc9e0e3857adc6f9 322 Pfam PF00146 NADH dehydrogenase 15 314 2.3E-120 T 29-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CVS42_RS00210 f242b9e720a04584021a45d45185d91b 404 SUPERFAMILY SSF53850 9 270 1.27E-47 T 29-03-2018 CVS42_RS00210 f242b9e720a04584021a45d45185d91b 404 Pfam PF13343 Bacterial extracellular solute-binding protein 61 270 2.8E-21 T 29-03-2018 CVS42_RS00210 f242b9e720a04584021a45d45185d91b 404 Gene3D G3DSA:3.40.190.10 7 124 2.5E-13 T 29-03-2018 CVS42_RS00210 f242b9e720a04584021a45d45185d91b 404 Gene3D G3DSA:3.40.190.10 125 274 2.7E-26 T 29-03-2018 CVS42_RS08330 5160254deef8e78b55705cc923a31457 343 Pfam PF05128 Domain of unknown function (DUF697) 178 336 2.5E-54 T 29-03-2018 IPR021147 Protein of unknown function DUF697 CVS42_RS08330 5160254deef8e78b55705cc923a31457 343 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 80 336 7.4E-76 T 29-03-2018 IPR006507 Uncharacterised protein family UPF0283 CVS42_RS03465 af55a7523d739f01f89bb757ccd6438b 191 Pfam PF09335 SNARE associated Golgi protein 51 156 2.7E-13 T 29-03-2018 IPR032816 SNARE associated Golgi protein CVS42_RS15350 913464e7643c3858224e9cc42e681e91 177 Pfam PF05163 DinB family 1 162 2.7E-20 T 29-03-2018 IPR007837 DNA damage-inducible protein DinB CVS42_RS15350 913464e7643c3858224e9cc42e681e91 177 Gene3D G3DSA:1.20.120.450 1 163 1.4E-18 T 29-03-2018 CVS42_RS15350 913464e7643c3858224e9cc42e681e91 177 SUPERFAMILY SSF109854 9 156 2.75E-29 T 29-03-2018 IPR034660 DinB/YfiT-like putative metalloenzymes CVS42_RS14115 48f541ffd267951da7717dd56d31dbf4 458 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 54 447 1.6E-110 T 29-03-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 CVS42_RS14115 48f541ffd267951da7717dd56d31dbf4 458 Pfam PF03606 C4-dicarboxylate anaerobic carrier 1 451 4.1E-86 T 29-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 CVS42_RS20390 e31007bf8e145742187c340858f55a4e 317 PIRSF PIRSF003097 19 313 3.5E-71 T 29-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 CVS42_RS19310 8f474bbcf671d9530655eac1746ebe2f 216 Pfam PF04340 Protein of unknown function, DUF484 1 210 2.8E-45 T 29-03-2018 IPR007435 Protein of unknown function DUF484 CVS42_RS19310 8f474bbcf671d9530655eac1746ebe2f 216 Gene3D G3DSA:3.30.450.40 35 210 1.5E-5 T 29-03-2018 IPR029016 GAF domain-like CVS42_RS19410 c3ee4f96dde88782564d017d79eaac89 207 Pfam PF16357 Putative PepSY_TM-like 13 205 8.4E-12 T 29-03-2018 IPR032307 Putative PepSY TM-like protein CVS42_RS15770 81b6bd89394c4a1157ce416a2af204a9 145 Pfam PF16743 Periplasmic lysozyme inhibitor of I-type lysozyme 22 142 2.7E-41 T 29-03-2018 IPR031948 Periplasmic lysozyme inhibitor, I-type CVS42_RS01415 968a0a259e4fe122a0f6874b892c27cd 303 Pfam PF00561 alpha/beta hydrolase fold 27 191 9.8E-18 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS01415 968a0a259e4fe122a0f6874b892c27cd 303 Gene3D G3DSA:3.40.50.1820 18 303 1.3E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS01415 968a0a259e4fe122a0f6874b892c27cd 303 SUPERFAMILY SSF53474 22 300 2.17E-49 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS11440 fa1471727d9db53daa2105baa8163f04 191 Gene3D G3DSA:2.40.10.220 106 191 3.5E-5 T 29-03-2018 CVS42_RS13570 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 252 264 7.5E-83 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS13570 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 56 71 7.5E-83 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS13570 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 121 139 7.5E-83 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS13570 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 188 206 7.5E-83 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS13570 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 82 101 7.5E-83 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS13570 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 162 180 7.5E-83 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS13570 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 38 53 7.5E-83 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS13570 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 23 38 7.5E-83 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS13570 a7ba0d3067942275ce8adde67195a898 365 PRINTS PR01010 Flagellar P-ring protein signature 104 121 7.5E-83 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS13570 a7ba0d3067942275ce8adde67195a898 365 Pfam PF02119 Flagellar P-ring protein 23 364 6.5E-137 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS13570 a7ba0d3067942275ce8adde67195a898 365 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 365 38.687 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CVS42_RS05880 a671f8d9ee241af1990939f3a2e2d033 271 Pfam PF16806 Antiactivator protein ExsD 41 266 1.6E-51 T 29-03-2018 IPR031835 Antiactivator protein ExsD CVS42_RS10550 431e5336f94ca321461d7077796814b0 348 Pfam PF04607 Region found in RelA / SpoT proteins 57 178 2.2E-24 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CVS42_RS10550 431e5336f94ca321461d7077796814b0 348 SUPERFAMILY SSF81301 25 208 1.63E-35 T 29-03-2018 CVS42_RS10550 431e5336f94ca321461d7077796814b0 348 Gene3D G3DSA:1.10.287.860 163 211 3.6E-11 T 29-03-2018 CVS42_RS10550 431e5336f94ca321461d7077796814b0 348 Gene3D G3DSA:3.30.460.10 10 161 2.2E-26 T 29-03-2018 CVS42_RS10550 431e5336f94ca321461d7077796814b0 348 SMART SM00954 57 180 5.6E-18 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CVS42_RS05345 4ed983a6a89999ecfc717779f1699e2c 67 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 63 3.5E-27 T 29-03-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing CVS42_RS05345 4ed983a6a89999ecfc717779f1699e2c 67 PIRSF PIRSF036704 1 65 1.2E-11 T 29-03-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing CVS42_RS02105 c601cd8bcbcd93a1b36df0820b2a6db2 166 PIRSF PIRSF030780 1 164 1.1E-54 T 29-03-2018 IPR016956 Inner membrane protein YdjM CVS42_RS02105 c601cd8bcbcd93a1b36df0820b2a6db2 166 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 157 1.7E-34 T 29-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CVS42_RS13530 ac765efad56feb2b1687925b65de42a8 292 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 248 288 9.5E-11 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CVS42_RS13530 ac765efad56feb2b1687925b65de42a8 292 Pfam PF10881 Protein of unknown function (DUF2726) 36 157 7.3E-42 T 29-03-2018 IPR024402 Domain of unknown function DUF2726 CVS42_RS13530 ac765efad56feb2b1687925b65de42a8 292 SUPERFAMILY SSF57783 245 288 1.43E-7 T 29-03-2018 CVS42_RS13530 ac765efad56feb2b1687925b65de42a8 292 Gene3D G3DSA:3.30.65.10 234 292 6.6E-13 T 29-03-2018 CVS42_RS07905 725e38c9281431f683019d2a0496b118 279 Pfam PF03239 Iron permease FTR1 family 1 257 9.3E-35 T 29-03-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 CVS42_RS00490 d44e36dbba7231b2280f3ed33cc01016 179 Gene3D G3DSA:2.30.30.410 34 170 4.4E-6 T 29-03-2018 CVS42_RS21800 757e85e701eb2041126ea7bf5642ace4 125 PIRSF PIRSF011271 1 118 9.2E-63 T 29-03-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 CVS42_RS21800 757e85e701eb2041126ea7bf5642ace4 125 Pfam PF05932 Tir chaperone protein (CesT) family 8 114 9.3E-20 T 29-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 CVS42_RS21800 757e85e701eb2041126ea7bf5642ace4 125 SUPERFAMILY SSF69635 5 116 3.11E-41 T 29-03-2018 CVS42_RS21800 757e85e701eb2041126ea7bf5642ace4 125 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 97 115 2.3E-40 T 29-03-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 CVS42_RS21800 757e85e701eb2041126ea7bf5642ace4 125 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 79 97 2.3E-40 T 29-03-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 CVS42_RS21800 757e85e701eb2041126ea7bf5642ace4 125 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 60 76 2.3E-40 T 29-03-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 CVS42_RS21800 757e85e701eb2041126ea7bf5642ace4 125 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 5 28 2.3E-40 T 29-03-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 CVS42_RS21800 757e85e701eb2041126ea7bf5642ace4 125 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 30 51 2.3E-40 T 29-03-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 CVS42_RS21800 757e85e701eb2041126ea7bf5642ace4 125 Gene3D G3DSA:3.30.1460.10 2 118 2.7E-23 T 29-03-2018 CVS42_RS16990 4d506dde2d8d59db781bba87858df648 201 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 100 171 6.3E-16 T 29-03-2018 IPR018648 Protein of unknown function DUF2076 CVS42_RS16990 4d506dde2d8d59db781bba87858df648 201 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 108 6.7E-35 T 29-03-2018 IPR018648 Protein of unknown function DUF2076 CVS42_RS10600 7b90743e9ee33356a1d1a86050a0dd25 137 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 4 135 8.8E-53 T 29-03-2018 IPR010005 Formate hydrogenlyase maturation HycH CVS42_RS10600 7b90743e9ee33356a1d1a86050a0dd25 137 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 1 135 7.0E-32 T 29-03-2018 IPR010005 Formate hydrogenlyase maturation HycH CVS42_RS02440 b6551a48feadcd3c055a20585e7b13bf 143 SUPERFAMILY SSF160719 34 136 6.15E-21 T 29-03-2018 CVS42_RS02440 b6551a48feadcd3c055a20585e7b13bf 143 Gene3D G3DSA:3.10.450.40 16 138 7.3E-23 T 29-03-2018 CVS42_RS02440 b6551a48feadcd3c055a20585e7b13bf 143 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 13 142 1.1E-40 T 29-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein CVS42_RS02440 b6551a48feadcd3c055a20585e7b13bf 143 Pfam PF04965 Gene 25-like lysozyme 34 121 1.0E-18 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD CVS42_RS02025 99ec4c2511ae43a3b73de62c10ace52b 159 SUPERFAMILY SSF48452 23 93 5.58E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS02025 99ec4c2511ae43a3b73de62c10ace52b 159 Gene3D G3DSA:1.25.40.10 13 153 5.2E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS13030 16d8c63c4cee153120109536ebe438b3 351 Gene3D G3DSA:3.40.50.980 65 263 1.7E-5 T 29-03-2018 CVS42_RS13030 16d8c63c4cee153120109536ebe438b3 351 SUPERFAMILY SSF56801 66 337 3.53E-9 T 29-03-2018 CVS42_RS13030 16d8c63c4cee153120109536ebe438b3 351 Pfam PF04443 Acyl-protein synthetase, LuxE 55 349 6.5E-41 T 29-03-2018 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723 CVS42_RS17365 60150c1d9033dfdaf53231f10ef050f6 213 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 28 208 1.8E-36 T 29-03-2018 IPR018635 Uncharacterised protein family UPF0319 CVS42_RS01465 78247fe3cba875945577b2b5b5066451 350 Pfam PF01699 Sodium/calcium exchanger protein 27 177 5.7E-13 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CVS42_RS01465 78247fe3cba875945577b2b5b5066451 350 Pfam PF01699 Sodium/calcium exchanger protein 212 341 2.9E-10 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CVS42_RS19950 e81e1efc79356fc620aea126ce642e35 277 Pfam PF09509 Protein of unknown function (Hypoth_ymh) 175 253 2.4E-9 T 29-03-2018 IPR012654 Conserved hypothetical protein CHP02391 CVS42_RS03425 e5e61ff15a1b4f4e04c988d118986a20 297 Pfam PF04393 Protein of unknown function (DUF535) 25 291 3.4E-62 T 29-03-2018 IPR007488 Protein of unknown function DUF535 CVS42_RS20795 d71fa020ab759bdebb83c795896a1d07 160 Pfam PF06496 Protein of unknown function (DUF1097) 8 140 4.5E-36 T 29-03-2018 IPR009476 Protein of unknown function DUF1097 CVS42_RS13275 411742d1c6db5a82462fe3e9ebcbadb7 448 SUPERFAMILY SSF48452 185 244 5.14E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS13275 411742d1c6db5a82462fe3e9ebcbadb7 448 SUPERFAMILY SSF48452 102 136 5.14E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS13275 411742d1c6db5a82462fe3e9ebcbadb7 448 Gene3D G3DSA:1.25.40.10 177 254 8.9E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS13275 411742d1c6db5a82462fe3e9ebcbadb7 448 Gene3D G3DSA:1.25.40.10 39 171 0.028 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CVS42_RS17955 bcc2e65a4348b36fc9a9e0bdf459c043 285 SUPERFAMILY SSF55186 117 265 1.12E-10 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CVS42_RS17955 bcc2e65a4348b36fc9a9e0bdf459c043 285 Gene3D G3DSA:3.30.980.10 117 283 5.7E-17 T 29-03-2018 CVS42_RS03385 beab5a0131a6a045636cdf5308bb4cf6 198 Pfam PF01810 LysE type translocator 19 190 8.3E-15 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CVS42_RS15535 d3f59326fe6da7fbcaa7c21ad7fe0eac 268 Pfam PF01435 Peptidase family M48 62 245 2.5E-40 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CVS42_RS15535 d3f59326fe6da7fbcaa7c21ad7fe0eac 268 Gene3D G3DSA:3.30.2010.10 48 146 2.6E-24 T 29-03-2018 CVS42_RS02575 a93133b06df6831099b4a2852a20ac99 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 292 1.4E-23 T 29-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CVS42_RS02575 a93133b06df6831099b4a2852a20ac99 347 Pfam PF01548 Transposase 10 149 1.0E-14 T 29-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CVS42_RS14000 47c56160c63b3d51bbf3e7770a0c87fb 281 SUPERFAMILY SSF56219 60 274 3.66E-24 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS14000 47c56160c63b3d51bbf3e7770a0c87fb 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 81 267 3.1E-9 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS14000 47c56160c63b3d51bbf3e7770a0c87fb 281 Gene3D G3DSA:3.60.10.10 56 278 5.9E-14 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CVS42_RS20105 da0ed1ae9e501cb520aeb1b8711df95b 182 Pfam PF06693 Protein of unknown function (DUF1190) 34 171 2.9E-18 T 29-03-2018 IPR009576 Biofilm formation YgiB CVS42_RS04390 a986e9f77b77b9d4b3572b773b2b340b 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 4.2E-28 T 29-03-2018 IPR007454 Uncharacterised protein family UPF0250 CVS42_RS04390 a986e9f77b77b9d4b3572b773b2b340b 87 SUPERFAMILY SSF117991 1 87 1.31E-30 T 29-03-2018 IPR027471 YbeD-like domain CVS42_RS04390 a986e9f77b77b9d4b3572b773b2b340b 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 25.277 T 29-03-2018 IPR007454 Uncharacterised protein family UPF0250 CVS42_RS04390 a986e9f77b77b9d4b3572b773b2b340b 87 Gene3D G3DSA:3.30.70.260 5 87 2.2E-28 T 29-03-2018 CVS42_RS02485 534e79336f9419d63693d1db79ec45f4 201 Pfam PF11319 Type VI secretion system VasI, EvfG, VC_A0118 28 201 3.1E-44 T 29-03-2018 IPR017738 Type VI secretion system-associated, VCA0118 CVS42_RS02485 534e79336f9419d63693d1db79ec45f4 201 TIGRFAM TIGR03360 VI_minor_1: type VI secretion-associated protein, VC_A0118 family 24 201 3.1E-63 T 29-03-2018 IPR017738 Type VI secretion system-associated, VCA0118 CVS42_RS00975 89db44eadb6a4fd88a00a9979c67a71c 129 Gene3D G3DSA:3.10.450.50 3 120 5.5E-10 T 29-03-2018 CVS42_RS00975 89db44eadb6a4fd88a00a9979c67a71c 129 SUPERFAMILY SSF54427 3 108 9.16E-11 T 29-03-2018 IPR032710 NTF2-like domain CVS42_RS00975 89db44eadb6a4fd88a00a9979c67a71c 129 Pfam PF12680 SnoaL-like domain 22 108 8.8E-8 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CVS42_RS01570 333f92fe0225a4908641b2080e8758a7 108 TIGRFAM TIGR01594 holin_lambda: phage holin, lambda family 1 102 1.2E-40 T 29-03-2018 IPR006481 Bacteriophage lambda, GpS, holin CVS42_RS01570 333f92fe0225a4908641b2080e8758a7 108 Pfam PF05106 Phage holin family (Lysis protein S) 4 101 1.3E-30 T 29-03-2018 IPR006481 Bacteriophage lambda, GpS, holin CVS42_RS11325 682f215473e38f09c2de2cd552f08f66 440 Pfam PF07670 Nucleoside recognition 127 225 8.0E-7 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CVS42_RS05490 f0ce44efcdebb831eda60a7b11e36e85 171 Pfam PF03748 Flagellar basal body-associated protein FliL 70 171 6.6E-21 T 29-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CVS42_RS03770 4b35bbc02027a0769879230bf0082d3a 326 Pfam PF17188 MucB/RseB C-terminal domain 219 317 1.6E-30 T 29-03-2018 IPR033436 MucB/RseB, C-terminal CVS42_RS03770 4b35bbc02027a0769879230bf0082d3a 326 Pfam PF03888 MucB/RseB N-terminal domain 25 199 2.7E-52 T 29-03-2018 IPR033434 MucB/RseB, N-terminal CVS42_RS03770 4b35bbc02027a0769879230bf0082d3a 326 Gene3D G3DSA:2.50.20.10 18 264 7.5E-17 T 29-03-2018 CVS42_RS03770 4b35bbc02027a0769879230bf0082d3a 326 PIRSF PIRSF005427 1 323 3.6E-110 T 29-03-2018 IPR005588 MucB/RseB CVS42_RS17990 b3555b6139ab8d8a973342ea1c56f6e8 301 Pfam PF00561 alpha/beta hydrolase fold 32 174 2.3E-14 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CVS42_RS17990 b3555b6139ab8d8a973342ea1c56f6e8 301 SUPERFAMILY SSF53474 13 295 5.98E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS17990 b3555b6139ab8d8a973342ea1c56f6e8 301 Gene3D G3DSA:3.40.50.1820 11 299 4.0E-25 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS04515 e43be110c8ff52126cdbd1dc5cb96f16 349 SUPERFAMILY SSF52540 96 298 1.54E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CVS42_RS04515 e43be110c8ff52126cdbd1dc5cb96f16 349 Gene3D G3DSA:3.40.50.300 119 326 3.0E-29 T 29-03-2018 CVS42_RS04515 e43be110c8ff52126cdbd1dc5cb96f16 349 Pfam PF02562 PhoH-like protein 123 326 6.6E-96 T 29-03-2018 IPR003714 PhoH-like protein GO:0005524 CVS42_RS17220 af303c4d8ce5a737c0fd6bdc86af168f 456 Pfam PF07670 Nucleoside recognition 142 237 1.5E-7 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CVS42_RS11620 133825e2f30abaf593cdf728963954d4 665 Gene3D G3DSA:1.50.10.20 281 665 1.4E-11 T 29-03-2018 CVS42_RS11620 133825e2f30abaf593cdf728963954d4 665 SUPERFAMILY SSF48208 471 578 1.31E-6 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CVS42_RS04025 c78caaaa2804f0c5e0000274062630d6 114 Pfam PF11169 Protein of unknown function (DUF2956) 8 110 1.2E-40 T 29-03-2018 IPR021339 Protein of unknown function DUF2956 CVS42_RS06965 33e4b3661502374af02c3a0a4491969b 124 Pfam PF05656 Protein of unknown function (DUF805) 11 113 1.8E-34 T 29-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 CVS42_RS22055 ac7716b31c0d2919e05e7bf6824b9127 434 Gene3D G3DSA:1.20.120.330 17 428 6.2E-4 T 29-03-2018 CVS42_RS22055 ac7716b31c0d2919e05e7bf6824b9127 434 Pfam PF01618 MotA/TolQ/ExbB proton channel family 298 412 6.2E-30 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CVS42_RS22055 ac7716b31c0d2919e05e7bf6824b9127 434 PIRSF PIRSF037714 18 434 4.8E-129 T 29-03-2018 IPR017270 Putative MotA/TolQ/ExbB family protein CVS42_RS18885 31981d34754b3212cf90a1ef6c91a776 112 Gene3D G3DSA:1.20.120.530 6 105 7.2E-5 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CVS42_RS21360 b97aa790f0abb92ccd6e632dccca316f 278 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 4 278 7.1E-122 T 29-03-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 CVS42_RS21360 b97aa790f0abb92ccd6e632dccca316f 278 Gene3D G3DSA:3.40.50.1820 1 278 2.6E-45 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS21360 b97aa790f0abb92ccd6e632dccca316f 278 Pfam PF00756 Putative esterase 25 273 3.2E-65 T 29-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CVS42_RS21360 b97aa790f0abb92ccd6e632dccca316f 278 SUPERFAMILY SSF53474 3 278 2.28E-90 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CVS42_RS07190 91ae51e3e95ecd0d6ba521ee354f04e7 124 Pfam PF05164 Cell division protein ZapA 20 104 1.6E-20 T 29-03-2018 IPR007838 Cell division protein ZapA-like CVS42_RS07190 91ae51e3e95ecd0d6ba521ee354f04e7 124 SUPERFAMILY SSF102829 20 108 6.15E-24 T 29-03-2018 IPR007838 Cell division protein ZapA-like CVS42_RS12280 758b9ad6cf670212b4139538ad174e4b 312 Pfam PF09925 Predicted membrane protein (DUF2157) 11 152 1.6E-32 T 29-03-2018 IPR018677 Domain of unknown function DUF2157 CVS42_RS19615 c6d361d42fb67b857a79a4631fdc0a76 249 Gene3D G3DSA:3.40.30.10 68 248 6.0E-41 T 29-03-2018 CVS42_RS19615 c6d361d42fb67b857a79a4631fdc0a76 249 Pfam PF13462 Thioredoxin 80 240 9.1E-27 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS19615 c6d361d42fb67b857a79a4631fdc0a76 249 SUPERFAMILY SSF52833 74 229 5.37E-42 T 29-03-2018 IPR012336 Thioredoxin-like fold CVS42_RS04105 fa45b0f3938fa5869a77fbe8c03ccca1 323 SUPERFAMILY SSF159501 30 287 2.98E-66 T 29-03-2018 CVS42_RS04105 fa45b0f3938fa5869a77fbe8c03ccca1 323 PIRSF PIRSF020419 1 303 9.6E-56 T 29-03-2018 IPR016773 Ferric uptake regulator, CjrA, predicted CVS42_RS04105 fa45b0f3938fa5869a77fbe8c03ccca1 323 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 51 257 2.2E-56 T 29-03-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN CVS42_RS04105 fa45b0f3938fa5869a77fbe8c03ccca1 323 Gene3D G3DSA:3.40.50.2300 28 248 0.0026 T 29-03-2018 CVS42_RS17715 427dc9f1548cc24a064e8d8731ac6105 22 Pfam PF13438 Domain of unknown function (DUF4113) 2 21 3.1E-6 T 29-03-2018 IPR025188 Domain of unknown function DUF4113 CVS42_RS12930 66680d2eeaf04644ebdb14cdf42823a4 247 SUPERFAMILY SSF53807 2 245 5.89E-60 T 29-03-2018 CVS42_RS12930 66680d2eeaf04644ebdb14cdf42823a4 247 Gene3D G3DSA:3.40.50.1980 106 247 3.0E-27 T 29-03-2018 CVS42_RS12930 66680d2eeaf04644ebdb14cdf42823a4 247 Pfam PF01497 Periplasmic binding protein 5 223 3.6E-29 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CVS42_RS12930 66680d2eeaf04644ebdb14cdf42823a4 247 Gene3D G3DSA:3.40.50.1980 1 105 2.2E-30 T 29-03-2018 CVS42_RS15035 40226f77da4aa26db829550039fda637 230 Pfam PF16537 Type II secretion system protein B 165 224 3.5E-20 T 29-03-2018 IPR032389 Type II secretion system protein B CVS42_RS18390 1bc3ba644d8853e0e503738a1d164a58 187 Pfam PF07298 NnrU protein 4 185 4.4E-44 T 29-03-2018 IPR009915 NnrU domain CVS42_RS18000 2ae60d78a74c650e28b5d381b8e96c32 206 Pfam PF10144 Bacterial virulence factor haemolysin 17 152 1.2E-17 T 29-03-2018 IPR019305 Uncharacterised protein family Smp CVS42_RS18000 2ae60d78a74c650e28b5d381b8e96c32 206 Gene3D G3DSA:3.30.450.20 30 153 4.6E-4 T 29-03-2018 CVS42_RS07880 e7ade1be167c9d054b22d31521bc6e8f 474 Pfam PF03600 Citrate transporter 44 419 6.2E-54 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CVS42_RS02330 2606185b696fe75a517dfd74c7f9bbd7 312 Gene3D G3DSA:3.40.50.1980 196 311 6.5E-25 T 29-03-2018 CVS42_RS02330 2606185b696fe75a517dfd74c7f9bbd7 312 Gene3D G3DSA:3.40.50.1980 19 195 2.4E-46 T 29-03-2018 CVS42_RS02330 2606185b696fe75a517dfd74c7f9bbd7 312 SUPERFAMILY SSF53807 20 311 3.14E-80 T 29-03-2018 CVS42_RS02330 2606185b696fe75a517dfd74c7f9bbd7 312 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 311 2.0E-61 T 29-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CVS42_RS06265 becc793fb3c40b4d9962c2c1c96a3e4e 223 Pfam PF13737 Transposase DDE domain 19 106 1.6E-28 T 29-03-2018 IPR025668 Transposase DDE domain CVS42_RS20830 d0c6b56e5991eb990297b26c488351ac 134 SUPERFAMILY SSF54631 1 128 3.03E-27 T 29-03-2018 CVS42_RS20830 d0c6b56e5991eb990297b26c488351ac 134 Gene3D G3DSA:3.10.580.10 1 132 2.3E-28 T 29-03-2018 CVS42_RS20830 d0c6b56e5991eb990297b26c488351ac 134 SMART SM00116 78 125 0.21 T 29-03-2018 IPR000644 CBS domain CVS42_RS20830 d0c6b56e5991eb990297b26c488351ac 134 SMART SM00116 11 59 0.66 T 29-03-2018 IPR000644 CBS domain CVS42_RS20830 d0c6b56e5991eb990297b26c488351ac 134 Pfam PF00571 CBS domain 19 55 4.9E-5 T 29-03-2018 IPR000644 CBS domain CVS42_RS20830 d0c6b56e5991eb990297b26c488351ac 134 Pfam PF00571 CBS domain 71 124 5.7E-11 T 29-03-2018 IPR000644 CBS domain CVS42_RS06580 bd65e93d8de359eca9f75900b70e28d8 217 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 12 129 6.0E-54 T 29-03-2018 IPR013559 YheO-like CVS42_RS06580 bd65e93d8de359eca9f75900b70e28d8 217 Pfam PF08348 YheO-like PAS domain 14 119 3.7E-34 T 29-03-2018 IPR013559 YheO-like CVS42_RS06580 bd65e93d8de359eca9f75900b70e28d8 217 Pfam PF13309 HTH domain 155 212 1.6E-14 T 29-03-2018 CVS42_RS02500 529c50cb9b8dfb1eb8a43d34e1ba7d6a 475 Pfam PF12486 Type VI secretion system, EvfB, or VasL 323 469 6.2E-48 T 29-03-2018 IPR021069 ImpA, C-terminal CVS42_RS02500 529c50cb9b8dfb1eb8a43d34e1ba7d6a 475 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 115 3.1E-22 T 29-03-2018 IPR010657 ImpA, N-terminal CVS42_RS14275 9dd3b3cb7acb5a4b4982c8bbdacace26 61 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 7.5E-15 T 29-03-2018 IPR021309 Protein of unknown function DUF2892 CVS42_RS10935 0838b48a70f128acad4ac8b4d4c65e9b 333 SUPERFAMILY SSF52980 2 111 3.38E-5 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CVS42_RS10935 0838b48a70f128acad4ac8b4d4c65e9b 333 Gene3D G3DSA:3.40.1350.10 1 122 0.0016 T 29-03-2018 CVS42_RS10275 35602f8eefcd9e034f0b08b5f2b59043 432 Pfam PF03222 Tryptophan/tyrosine permease family 38 395 3.6E-14 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CVS42_RS10275 35602f8eefcd9e034f0b08b5f2b59043 432 TIGRFAM TIGR00814 stp: serine transporter 27 421 1.4E-163 T 29-03-2018 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 CVS42_RS21700 ba5cd7aafe964def712019e21287c47b 485 PIRSF PIRSF006247 1 485 1.3E-177 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CVS42_RS21700 ba5cd7aafe964def712019e21287c47b 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 468 2.0E-114 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CVS42_RS21700 ba5cd7aafe964def712019e21287c47b 485 Pfam PF02386 Cation transport protein 38 479 9.7E-91 T 29-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CVS42_RS05105 7d324e6c3a78ce6173bf7827b62dc942 130 Pfam PF06476 Protein of unknown function (DUF1090) 13 113 5.7E-28 T 29-03-2018 IPR009468 Protein of unknown function DUF1090 CVS42_RS13200 820d20440668bbe848b9220fa77d8be1 213 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 6 201 1.1E-9 T 29-03-2018 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 CVS42_RS03950 12ba498f4e596d464d2023b012fa4820 177 Pfam PF13590 Domain of unknown function (DUF4136) 65 175 1.6E-10 T 29-03-2018 IPR025411 Domain of unknown function DUF4136 CVS42_RS15820 8768c39b831713d297eec457e49fd137 427 Pfam PF03222 Tryptophan/tyrosine permease family 29 393 2.1E-14 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CVS42_RS15820 8768c39b831713d297eec457e49fd137 427 TIGRFAM TIGR00814 stp: serine transporter 18 416 7.8E-180 T 29-03-2018 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 CVS42_RS09970 7eebb1870f673350c92207d0fa280e0d 100 Pfam PF07130 YebG protein 1 74 1.7E-31 T 29-03-2018 IPR009813 Uncharacterised protein family YebG CVS42_RS09970 7eebb1870f673350c92207d0fa280e0d 100 Gene3D G3DSA:1.10.10.710 22 84 2.3E-22 T 29-03-2018 CVS42_RS20410 d8e22f83e753b3ef38ea2549861f3393 103 Pfam PF06611 Protein of unknown function (DUF1145) 5 60 1.3E-16 T 29-03-2018 IPR009525 Protein of unknown function DUF1145 CVS42_RS01020 bc74a69968b60f4e05ba1f6616411b22 242 Gene3D G3DSA:3.40.50.2020 83 242 1.3E-30 T 29-03-2018 CVS42_RS01020 bc74a69968b60f4e05ba1f6616411b22 242 SUPERFAMILY SSF53271 68 240 1.85E-32 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CVS42_RS21365 e1b3d99f71d7388a652e0175a0f745b9 240 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 48 223 3.4E-38 T 29-03-2018 IPR021255 Putative auto-transporter adhesin, head GIN domain CVS42_RS04865 dec6db584da6a729736abe233da86722 123 Pfam PF07784 Protein of unknown function (DUF1622) 35 97 1.0E-23 T 29-03-2018 IPR012427 Protein of unknown function DUF1622 CVS42_RS21025 81bf9c853767bc931d8f7bbb4520d714 86 SUPERFAMILY SSF160272 1 86 8.11E-29 T 29-03-2018 IPR009962 Protein of unknown function DUF1488 CVS42_RS21025 81bf9c853767bc931d8f7bbb4520d714 86 Pfam PF07369 Protein of unknown function (DUF1488) 5 86 1.2E-26 T 29-03-2018 IPR009962 Protein of unknown function DUF1488 CVS42_RS21025 81bf9c853767bc931d8f7bbb4520d714 86 Gene3D G3DSA:3.30.160.140 5 85 4.9E-28 T 29-03-2018 IPR009962 Protein of unknown function DUF1488 CVS42_RS14800 5b3e0aad45733b0b2f6aa90402ba0f06 135 Pfam PF11697 Protein of unknown function (DUF3293) 27 99 3.7E-17 T 29-03-2018 IPR021710 Protein of unknown function DUF3293 CVS42_RS03205 54a398ef73920c188b55635c25463c1c 700 Gene3D G3DSA:2.40.160.20 386 620 0.0012 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS19585 56a40ba8b148c1f1193841a28e9b4777 231 Gene3D G3DSA:1.10.287.620 23 149 2.8E-5 T 29-03-2018 CVS42_RS14380 6d8f1be6dba638fcae603aeb1ee78127 377 Pfam PF13477 Glycosyl transferase 4-like 5 148 1.2E-16 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CVS42_RS14380 6d8f1be6dba638fcae603aeb1ee78127 377 Pfam PF00534 Glycosyl transferases group 1 188 346 2.9E-21 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CVS42_RS14380 6d8f1be6dba638fcae603aeb1ee78127 377 SUPERFAMILY SSF53756 17 366 8.28E-59 T 29-03-2018 CVS42_RS14380 6d8f1be6dba638fcae603aeb1ee78127 377 Gene3D G3DSA:3.40.50.2000 182 353 1.4E-32 T 29-03-2018 CVS42_RS14380 6d8f1be6dba638fcae603aeb1ee78127 377 Gene3D G3DSA:3.40.50.2000 2 181 4.4E-14 T 29-03-2018 CVS42_RS14790 7fe5f7aa898d2542602b2e3261ad798b 159 Gene3D G3DSA:2.40.160.20 29 159 3.8E-6 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS14790 7fe5f7aa898d2542602b2e3261ad798b 159 SUPERFAMILY SSF56925 48 116 4.19E-6 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS14790 7fe5f7aa898d2542602b2e3261ad798b 159 SUPERFAMILY SSF56925 145 159 4.19E-6 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CVS42_RS08010 ee85751a47c3713f4cc3911241ac518d 481 Pfam PF03432 Relaxase/Mobilisation nuclease domain 17 254 1.3E-19 T 29-03-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 CVS42_RS08175 b647e7be114cdadca0dc1f63d9c7ca36 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 9 65 2.5E-15 T 29-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CVS42_RS16475 f559d612d42cd7d1244f0a7c1937cbe2 193 SUPERFAMILY SSF160443 93 175 1.26E-15 T 29-03-2018 IPR002625 Smr domain CVS42_RS16475 f559d612d42cd7d1244f0a7c1937cbe2 193 SMART SM00463 92 175 8.5E-15 T 29-03-2018 IPR002625 Smr domain CVS42_RS16475 f559d612d42cd7d1244f0a7c1937cbe2 193 Pfam PF01713 Smr domain 95 175 3.7E-22 T 29-03-2018 IPR002625 Smr domain CVS42_RS01540 03780d5cd9f01524f130e865d5ea3722 393 Pfam PF04865 Baseplate J-like protein 84 332 5.2E-18 T 29-03-2018 IPR006949 Baseplate protein J-like CVS42_RS03060 7055d56f93dfe97a5856339776c7c007 157 Pfam PF11736 Protein of unknown function (DUF3299) 54 152 9.1E-42 T 29-03-2018 IPR021727 Protein of unknown function DUF3299 CVS42_RS12090 9921cc3fe056dd27a0b83c8a528fb9a4 189 Pfam PF07603 Protein of unknown function (DUF1566) 43 173 2.8E-20 T 29-03-2018 IPR011460 Protein of unknown function DUF1566 CVS42_RS11340 70e4c8cb06bdc9c4a73e41ca4464f7cd 470 Pfam PF12684 PDDEXK-like domain of unknown function (DUF3799) 246 385 1.4E-18 T 29-03-2018 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain CVS42_RS06380 d3172bcd7993585ae1950dc0f8656129 84 Pfam PF03927 NapD protein 6 80 2.2E-27 T 29-03-2018 IPR005623 Chaperone NapD, nitrate reductase assembly CVS42_RS14630 4e5cc2ebdf95e49e21f90e2360f3b94f 281 Pfam PF14491 Protein of unknown function (DUF4435) 21 237 2.6E-19 T 29-03-2018 IPR029492 Domain of unknown function DUF4435 CVS42_RS05850 a7951803a5e57749810d7940d025c967 390 Gene3D G3DSA:1.20.1170.10 34 385 3.3E-5 T 29-03-2018 CVS42_RS05850 a7951803a5e57749810d7940d025c967 390 Pfam PF04888 Secretion system effector C (SseC) like family 104 385 2.6E-43 T 29-03-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 CVS42_RS11640 dfdf4480b8b2251d84181c8828d03710 120 Pfam PF11042 Protein of unknown function (DUF2750) 13 115 2.5E-35 T 29-03-2018 IPR021284 Protein of unknown function DUF2750 CVS42_RS22150 160b620b5c57ab150ee579961876510a 130 Pfam PF03899 ATP synthase I chain 16 113 1.3E-13 T 29-03-2018 IPR005598 ATP synthase protein I CVS42_RS12440 6b22ec921fb95f4bc497e6e9de881377 167 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 24 158 8.0E-32 T 29-03-2018 IPR018639 Domain of unknown function DUF2062 CVS42_RS20965 26a6d13163c743ae4e10a872cd57fca0 468 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 461 2.7E-131 T 29-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 CVS42_RS08185 2bc29f7dd1f850d8c262dca35706cce1 198 Pfam PF11726 Inovirus Gp2 15 195 3.2E-48 T 29-03-2018 CVS42_RS14135 a4330cb58aa5b11c13dfd16149db879c 229 SUPERFAMILY SSF55166 17 178 1.8E-19 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CVS42_RS14135 a4330cb58aa5b11c13dfd16149db879c 229 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 22 178 4.4E-36 T 29-03-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 CVS42_RS14135 a4330cb58aa5b11c13dfd16149db879c 229 Gene3D G3DSA:3.30.1380.10 15 188 1.6E-30 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CVS42_RS11310 3fe8a125dd5c2b07e2d010d158ec0ffe 67 Gene3D G3DSA:1.10.260.40 1 65 5.9E-9 T 29-03-2018 CVS42_RS03630 45c2b6de1877ca0dda540180a8ff4f53 732 Pfam PF11308 Glycosyl hydrolases related to GH101 family, GH129 361 684 1.6E-119 T 29-03-2018 IPR021459 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 CVS42_RS15320 f10dd6ff2cbbe95d4f100e79440c2c63 218 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 18 213 2.5E-46 T 29-03-2018 IPR006214 Bax inhibitor 1-related CVS42_RS19385 371e11fa3284fb499e2c3caf9f0268ba 292 SUPERFAMILY SSF103481 49 148 5.62E-11 T 29-03-2018 CVS42_RS19385 371e11fa3284fb499e2c3caf9f0268ba 292 SUPERFAMILY SSF103481 193 291 4.19E-13 T 29-03-2018 CVS42_RS19385 371e11fa3284fb499e2c3caf9f0268ba 292 Pfam PF00892 EamA-like transporter family 156 288 1.3E-12 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CVS42_RS04310 5dfba1d387f4c599f8f6a0b2f39a205c 155 Pfam PF12821 Threonine/Serine exporter, ThrE 12 146 2.4E-37 T 29-03-2018 IPR024528 Threonine/Serine exporter, ThrE CVS42_RS17110 eff374b846243012b6fa3031f07cc649 83 Pfam PF11173 Protein of unknown function (DUF2960) 1 80 1.4E-35 T 29-03-2018 IPR021343 Protein of unknown function DUF2960 CVS42_RS05855 c0b0733878a182c76ce605f72398a5fe 298 Pfam PF05844 YopD protein 2 297 8.8E-102 T 29-03-2018 IPR008898 YopD-like CVS42_RS08530 d7a37e274970abd5793c56ac7230b453 77 Gene3D G3DSA:3.10.290.10 1 70 2.5E-9 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CVS42_RS08530 d7a37e274970abd5793c56ac7230b453 77 SUPERFAMILY SSF55174 5 68 9.16E-18 T 29-03-2018 CVS42_RS08530 d7a37e274970abd5793c56ac7230b453 77 Pfam PF13275 S4 domain 8 68 2.2E-21 T 29-03-2018 CVS42_RS19400 7eefbf4fd611a644d2352ea676e1d4a7 345 Pfam PF01757 Acyltransferase family 4 327 5.3E-24 T 29-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CVS42_RS13420 bc7d5bb39ecc7b36698706a3cf98d9fc 279 Pfam PF04116 Fatty acid hydroxylase superfamily 85 219 5.2E-29 T 29-03-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 CVS42_RS19445 e61527aeabf0ab554e270b4fc8bd4c69 136 Pfam PF15655 NTF2 fold immunity protein 10 134 1.5E-43 T 29-03-2018 IPR028049 NTF2 fold immunity protein CVS42_RS21195 6c13e571ae1a758d9a5c78e5ea52bac3 344 Pfam PF04143 Sulphur transport 20 333 3.8E-41 T 29-03-2018 IPR007272 Sulphur transport domain CVS42_RS05230 05740a4b6a196b841d0e95a4040482d3 87 Pfam PF10048 Predicted integral membrane protein (DUF2282) 34 84 7.1E-22 T 29-03-2018 IPR018740 Protein of unknown function DUF2282, integral membrane CVS42_RS19140 e689cdc0d4127acbf6d198436cd96e3c 118 SUPERFAMILY SSF63520 21 111 1.15E-7 T 29-03-2018 IPR011608 PRD domain GO:0006355 CVS42_RS19140 e689cdc0d4127acbf6d198436cd96e3c 118 Gene3D G3DSA:1.10.1790.10 2 112 1.4E-8 T 29-03-2018 IPR011608 PRD domain GO:0006355 CVS42_RS19140 e689cdc0d4127acbf6d198436cd96e3c 118 TIGRFAM TIGR03582 EF_0829: PRD domain protein, EF_0829/AHA_3910 family 3 111 9.4E-45 T 29-03-2018 IPR020044 PRD domain protein, EF0829/AHA3910 CVS42_RS01345 e739fa76258bbb05b3e659a791960e59 258 Gene3D G3DSA:1.10.3720.10 11 258 9.6E-37 T 29-03-2018 CVS42_RS01345 e739fa76258bbb05b3e659a791960e59 258 SUPERFAMILY SSF161098 12 257 8.69E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS01345 e739fa76258bbb05b3e659a791960e59 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 256 6.0E-11 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CVS42_RS15230 63e775baf5f0018a0e2764e77597cc24 141 Pfam PF10980 Protein of unknown function (DUF2787) 18 138 2.5E-35 T 29-03-2018 IPR021248 Protein of unknown function DUF2787 CVS42_RS12750 2c9434d1749565130ec2fa8f5a05ffbc 444 Pfam PF03553 Na+/H+ antiporter family 23 217 1.4E-15 T 29-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CVS42_RS10965 2337cb79f87df96018e8d71a30fde27d 241 Gene3D G3DSA:1.20.5.170 5 102 3.0E-4 T 29-03-2018 CVS42_RS03120 1aa4b957a50ada83c2e02ca249418db0 106 SUPERFAMILY SSF103481 7 104 2.09E-12 T 29-03-2018 CVS42_RS03120 1aa4b957a50ada83c2e02ca249418db0 106 Pfam PF00893 Small Multidrug Resistance protein 4 95 1.9E-17 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CVS42_RS01645 cc3caa2c740a141db88dcd059e69f895 922 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 213 509 4.8E-70 T 29-03-2018 IPR008766 Replication gene A protein GO:0006260 CVS42_RS16125 947fb13fd12c5c084a78e674ee47d4b7 99 Pfam PF11743 Protein of unknown function (DUF3301) 6 93 6.6E-28 T 29-03-2018 IPR021732 Protein of unknown function DUF3301 CVS42_RS00990 b674c5a2daefe614b7aae93725f83958 450 Gene3D G3DSA:2.70.70.10 167 450 3.3E-34 T 29-03-2018 CVS42_RS00990 b674c5a2daefe614b7aae93725f83958 450 SUPERFAMILY SSF51261 269 447 2.56E-45 T 29-03-2018 IPR011055 Duplicated hybrid motif CVS42_RS00990 b674c5a2daefe614b7aae93725f83958 450 Pfam PF01551 Peptidase family M23 350 443 3.6E-26 T 29-03-2018 IPR016047 Peptidase M23 CVS42_RS16930 91684adc02494d11b47b9b2e065c7971 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 65 169 6.6E-22 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CVS42_RS12460 ef707c6ce5f720b11db6590381c5cd11 123 Pfam PF04219 Protein of unknown function, DUF 8 94 2.9E-32 T 29-03-2018 IPR007335 Protein of unknown function DUF413 CVS42_RS16470 86e9d8c317756634585a35153deea875 59 Pfam PF11346 Protein of unknown function (DUF3149) 4 42 6.3E-15 T 29-03-2018 IPR021494 Protein of unknown function DUF3149 CVS42_RS12620 d595937ffa219e60a1bf7a91a5578ee0 51 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 6.1E-23 T 29-03-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related CVS42_RS16310 8ec6c446b2670436792d4427a7a31f0b 163 Gene3D G3DSA:3.50.70.10 7 145 4.3E-19 T 29-03-2018 IPR016088 Chalcone isomerase, 3-layer sandwich GO:0009813|GO:0045430 CVS42_RS16310 8ec6c446b2670436792d4427a7a31f0b 163 Pfam PF16036 Chalcone isomerase-like 26 161 3.1E-12 T 29-03-2018 IPR016087 Chalcone isomerase GO:0016872 CVS42_RS10355 437523d42a663642aa336b9c21a09c74 259 Pfam PF11859 Protein of unknown function (DUF3379) 1 254 4.6E-76 T 29-03-2018 IPR021806 Protein of unknown function DUF3379 CVS42_RS12030 d5da384a2384a3774897f037003870e9 205 Pfam PF04536 TPM domain 109 180 2.2E-8 T 29-03-2018 IPR007621 TPM domain CVS42_RS22005 f7b86511aac6fb58688df9b66933dec9 414 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 12 397 3.8E-63 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 CVS42_RS07330 c47938b1860e437d13173a01f72a5d73 356 Pfam PF01594 AI-2E family transporter 20 345 1.9E-76 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like CVS42_RS09945 238bfb47f88729f96fdaab4e6f415406 118 Pfam PF12375 Phage protein 64 91 3.4E-6 T 29-03-2018 IPR021077 Bacteriophage phi-Lf, Orf112 CVS42_RS01680 a30bf0693c314c4f959d5362fced0785 95 Gene3D G3DSA:1.10.1660.10 21 83 4.1E-5 T 29-03-2018 CVS42_RS04620 9c953123db31bb413423732b3c2917e0 224 Pfam PF12261 Thermostable hemolysin 16 185 2.4E-59 T 29-03-2018 IPR022050 Thermostable hemolysin CVS42_RS06635 d4db5ef8ef396bdcdb426ecd6b168b98 420 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 417 4.7E-24 T 29-03-2018 IPR010352 Protein of unknown function DUF945 CVS42_RS06115 6bc3e686404b99e9582369addae4f203 521 Pfam PF13148 Protein of unknown function (DUF3987) 31 396 2.8E-77 T 29-03-2018 IPR025048 Protein of unknown function DUF3987) CVS42_RS14835 de4050dd83bcdcffa6e2f5730b5aae4c 128 Pfam PF04343 Protein of unknown function, DUF488 12 120 1.6E-14 T 29-03-2018 IPR007438 Protein of unknown function DUF488 CVS42_RS12200 945769793f8edf800ee029993272587d 197 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 35 139 7.5E-12 T 29-03-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted CVS42_RS09985 885a217b1e499907b4d2236b22aaced2 190 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 14 123 3.8E-35 T 29-03-2018 IPR008769 Poly granule associated CVS42_RS06120 ed41f7588d35c53092c8803529fba80a 75 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 6 62 9.0E-19 T 29-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CVS42_RS06120 ed41f7588d35c53092c8803529fba80a 75 Gene3D G3DSA:1.10.10.10 9 74 1.5E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CVS42_RS03750 067c9f2902485dd4b709c306e17220c4 130 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 11 122 1.1E-4 T 29-03-2018 IPR009883 Inner membrane protein YgfX CVS42_RS05785 0929be3238a91b9223bbcabc44283066 185 TIGRFAM TIGR02514 type_III_yscP: type III secretion system needle length determinant 60 185 6.0E-49 T 29-03-2018 IPR013354 Type III secretion system needle length determinant, C-terminal domain GO:0009405 CVS42_RS04810 9b7b6e7821bb0e3537835477c890a35c 71 Gene3D G3DSA:1.20.1280.40 13 71 1.4E-13 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA CVS42_RS12025 11f360f9643f7fe267820737b3d8d49a 241 Pfam PF04536 TPM domain 32 155 1.0E-40 T 29-03-2018 IPR007621 TPM domain CVS42_RS10250 aa12aaa84c048ce2746a5732b5169839 406 Gene3D G3DSA:3.40.50.150 14 374 4.7E-7 T 29-03-2018 CVS42_RS10250 aa12aaa84c048ce2746a5732b5169839 406 Pfam PF13679 Methyltransferase domain 132 238 1.4E-12 T 29-03-2018 IPR025714 Methyltransferase domain CVS42_RS06055 0d21dd96101fc64733cb3a9fd75d7178 141 Pfam PF10980 Protein of unknown function (DUF2787) 17 138 1.1E-34 T 29-03-2018 IPR021248 Protein of unknown function DUF2787 CVS42_RS02825 a993d086a46195cae500ac3c5c46450c 81 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 1 74 1.4E-20 T 29-03-2018 IPR011846 Cyd operon protein YbgE CVS42_RS11940 19e79d9634bfc267690eb4f1b1dbef3b 521 Pfam PF03806 AbgT putative transporter family 20 518 3.3E-198 T 29-03-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 CVS42_RS03075 7799d90429bba6002f3dcd19c81aef97 198 Pfam PF10986 Protein of unknown function (DUF2796) 28 194 8.9E-55 T 29-03-2018 IPR021253 Protein of unknown function DUF2796 CVS42_RS09775 2a7c0be5747a420c5dc48600967811a3 166 Pfam PF05751 FixH 11 151 2.9E-39 T 29-03-2018 IPR008620 Nitrogen fixation protein FixH CVS42_RS15095 d6dbe43f74e1852470398d0403628c15 255 Pfam PF01203 Type II secretion system (T2SS), protein N 42 250 1.7E-51 T 29-03-2018 IPR022792 Type II secretion system, protein N CVS42_RS21280 a8c94b26c5393612e69f91d5cff22b3c 168 Pfam PF04463 Protein of unknown function (DUF523) 9 144 6.3E-43 T 29-03-2018 IPR007553 Domain of unknown function DUF523 CVS42_RS05245 dc5df23d4ec5aaffde527be88e6e250b 147 Pfam PF07681 DoxX 25 105 2.2E-16 T 29-03-2018 IPR032808 DoxX family CVS42_RS11000 a8c5f682e200a0ba361773e136272a75 103 Pfam PF04341 Protein of unknown function, DUF485 10 98 3.4E-35 T 29-03-2018 IPR007436 Protein of unknown function DUF485 CVS42_RS02700 d3334cc201c17658a86d01cf9d6019b0 142 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 6 141 2.0E-32 T 29-03-2018 IPR020206 Uncharacterised protein family, VP2110 CVS42_RS02700 d3334cc201c17658a86d01cf9d6019b0 142 Pfam PF10952 Protein of unknown function (DUF2753) 6 142 5.6E-61 T 29-03-2018 IPR020206 Uncharacterised protein family, VP2110 CVS42_RS16120 af0e5e2ff1ea7e2b93bdbc9f78102e0a 346 Pfam PF12069 Protein of unknown function (DUF3549) 7 343 6.3E-121 T 29-03-2018 IPR021936 Protein of unknown function DUF3549 CVS42_RS19835 605e4caef0c433ca9f70f71b9c5c767a 398 Pfam PF05940 NnrS protein 15 392 7.3E-110 T 29-03-2018 IPR010266 NnrS CVS42_RS00770 4060bba21f706df34eeb972546a34c57 148 Pfam PF06127 Protein of unknown function (DUF962) 1 143 1.0E-21 T 29-03-2018 IPR009305 Protein of unknown function DUF962 CVS42_RS14265 aedf9e23445d5cff90dd99bc68a357dc 136 Pfam PF04143 Sulphur transport 24 126 2.1E-9 T 29-03-2018 IPR007272 Sulphur transport domain CVS42_RS09545 49771403ecf8ab042a7b83a7cfb50f33 83 Pfam PF06945 Protein of unknown function (DUF1289) 11 57 3.5E-19 T 29-03-2018 IPR010710 Protein of unknown function DUF1289 CVS42_RS03610 a6f8099e11a3c8cc0f1947fa89114547 720 Pfam PF05170 AsmA family 4 604 2.2E-76 T 29-03-2018 IPR007844 AsmA CVS42_RS18110 261abc194d2d2819315df757b9246a84 158 Pfam PF13681 Type IV pilus assembly protein PilX C-term 89 157 6.8E-16 T 29-03-2018 IPR025205 PilX/PilW C-terminal domain CVS42_RS18110 261abc194d2d2819315df757b9246a84 158 Pfam PF14341 PilX N-terminal 6 56 4.6E-14 T 29-03-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain CVS42_RS18475 5c8605fb9a6d4d8005d4b04472d5e6b3 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 87 4.4E-23 T 29-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CVS42_RS16490 0ecac651406eb75ad9adc648af7030ec 543 Gene3D G3DSA:2.160.10.10 179 475 9.2E-4 T 29-03-2018 CVS42_RS15015 688d724ea84764b4712a84366e319be4 387 Pfam PF05762 VWA domain containing CoxE-like protein 184 271 1.5E-8 T 29-03-2018 IPR008912 Uncharacterised protein family CoxE-like CVS42_RS21500 f0f27734b7867742feb3226a48d8fb0a 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 421 8.8E-74 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS21500 f0f27734b7867742feb3226a48d8fb0a 453 Pfam PF01554 MatE 251 391 1.1E-16 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS21500 f0f27734b7867742feb3226a48d8fb0a 453 Pfam PF01554 MatE 24 184 3.9E-23 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CVS42_RS13790 b1562aba105263f5178bf49d20241a11 169 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 6 158 1.3E-32 T 29-03-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) CVS42_RS12250 68aba21545f180bed762597f66ccb364 216 Pfam PF11140 Protein of unknown function (DUF2913) 5 209 2.0E-74 T 29-03-2018 IPR021316 Protein of unknown function DUF2913 CVS42_RS00855 fabcdf171b19d059078f4e702996869a 95 Pfam PF12305 Protein of unknown function (DUF3630) 3 93 2.1E-26 T 29-03-2018 IPR022080 Protein of unknown function DUF3630 CVS42_RS04880 78bfff9d204e5252dfb1eb3c8b20058b 249 Pfam PF06889 Protein of unknown function (DUF1266) 47 225 1.6E-23 T 29-03-2018 IPR009677 Protein of unknown function DUF1266 CVS42_RS12705 7e23aec61b3b28062fe18ad386cc54af 321 Gene3D G3DSA:2.40.128.130 46 320 1.3E-7 T 29-03-2018 CVS42_RS12705 7e23aec61b3b28062fe18ad386cc54af 321 Pfam PF03797 Autotransporter beta-domain 55 224 6.6E-6 T 29-03-2018 IPR005546 Autotransporter beta-domain CVS42_RS10040 481412f771d1c6e85144a7c3056cae43 200 Pfam PF04403 Paraquat-inducible protein A 43 197 6.6E-45 T 29-03-2018 IPR007498 Paraquat-inducible protein A CVS42_RS01280 529e27efc2a1ceca67363cdfdd504b52 130 Pfam PF07681 DoxX 8 87 4.5E-18 T 29-03-2018 IPR032808 DoxX family CVS42_RS04290 f9aada5317f7b404738612675c69b0e3 133 Pfam PF10807 Protein of unknown function (DUF2541) 11 130 1.6E-10 T 29-03-2018 IPR020240 Uncharacterised protein family UPF0412, YaaI CVS42_RS18855 713b929b7741c0a72926fecb424cdaf3 153 Gene3D G3DSA:2.40.10.220 11 131 1.6E-5 T 29-03-2018 CVS42_RS04305 10f52332a76bd2f1561ff3a9d0a11dc3 265 Pfam PF06738 Putative threonine/serine exporter 20 257 5.9E-67 T 29-03-2018 IPR010619 Putative threonine/serine exporter CVS42_RS11720 afcc2f5b79bdcf91ea5b719c070b877b 156 Pfam PF05433 Glycine zipper 2TM domain 61 99 3.0E-11 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CVS42_RS15710 e9c1f46d85b75f82f666e63c2ed3b64e 123 Pfam PF04138 GtrA-like protein 12 122 2.4E-15 T 29-03-2018 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 CVS42_RS00875 4766f4369bc56b7d54a3f0c1452c0bb8 212 Pfam PF06206 CpeT/CpcT family (DUF1001) 35 208 8.9E-35 T 29-03-2018 IPR010404 Chromophore lyase CpcT/CpeT GO:0016829|GO:0017009 CVS42_RS05635 192086cf0ce0f5377285056ceb40ca00 159 Pfam PF03918 Cytochrome C biogenesis protein 11 153 2.8E-55 T 29-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family CVS42_RS02810 574762ec942b44aa341c24439b8bf034 518 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 1.2E-177 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CVS42_RS02810 574762ec942b44aa341c24439b8bf034 518 PIRSF PIRSF006446 341 516 5.9E-33 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CVS42_RS02810 574762ec942b44aa341c24439b8bf034 518 PIRSF PIRSF006446 2 334 7.8E-117 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CVS42_RS16315 677ca8fdef37d365aa153f16b7cb723f 73 Pfam PF09493 Tryptophan-rich protein (DUF2389) 13 72 6.6E-17 T 29-03-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich CVS42_RS02345 f85b8e4019dd5d3d77d5efeee63f5f9a 432 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 1.7E-32 T 29-03-2018 IPR032244 LapD/MoxY, periplasmic domain CVS42_RS07015 cb4e6c33cdb386ca174bad7a3209d6c0 445 PIRSF PIRSF002746 2 445 2.4E-139 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CVS42_RS07015 cb4e6c33cdb386ca174bad7a3209d6c0 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 6 445 1.5E-158 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CVS42_RS07015 cb4e6c33cdb386ca174bad7a3209d6c0 445 Pfam PF02447 GntP family permease 7 444 4.4E-153 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CVS42_RS05260 63b8f76aed42930e998c9e455ea74588 206 Pfam PF11810 Domain of unknown function (DUF3332) 32 197 7.4E-42 T 29-03-2018 IPR021768 Protein of unknown function DUF3332 CVS42_RS13700 48ac8f3f7b4a0081ddd17290ab98624d 82 Pfam PF06146 Phosphate-starvation-inducible E 11 74 5.1E-5 T 29-03-2018 IPR020948 Phosphate-starvation-induced PsiE-like CVS42_RS13700 48ac8f3f7b4a0081ddd17290ab98624d 82 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 8 80 1.8E-20 T 29-03-2018 IPR013468 Conserved hypothetical protein CHP02647 CVS42_RS20420 1b1ce6209bdae909a50da95ba766c6fe 128 Pfam PF04247 Invasion gene expression up-regulator, SirB 5 122 2.3E-39 T 29-03-2018 IPR007360 Invasion gene expression up-regulator, SirB CVS42_RS20420 1b1ce6209bdae909a50da95ba766c6fe 128 PIRSF PIRSF005610 1 121 1.1E-27 T 29-03-2018 IPR007360 Invasion gene expression up-regulator, SirB CVS42_RS06950 c578d1bf681482fe13e54091e7cda69d 106 Pfam PF12321 Protein of unknown function (DUF3634) 1 93 1.0E-17 T 29-03-2018 IPR022090 Protein of unknown function DUF3634 CVS42_RS15455 5b2d1cececad5f0c5ae216a71bff4244 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 81 9.6E-40 T 29-03-2018 IPR019633 Protein of unknown function DUF2498 CVS42_RS09335 50a3dfa50062503aef0b6b2c67685e5f 456 Pfam PF00860 Permease family 33 416 3.0E-76 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CVS42_RS07970 42b33cd64a1aae85fd4ea0032eb81909 254 Pfam PF13643 Domain of unknown function (DUF4145) 132 221 3.7E-13 T 29-03-2018 IPR025285 Domain of unknown function DUF4145 CVS42_RS08905 c91692f2132c7be7dfae36e19c384d41 287 Pfam PF11150 Protein of unknown function (DUF2927) 57 257 1.3E-61 T 29-03-2018 IPR021323 Protein of unknown function DUF2927 CVS42_RS13690 ee8c0d19dc9c48e0ce9892b87735470c 130 Pfam PF11042 Protein of unknown function (DUF2750) 22 121 3.1E-37 T 29-03-2018 IPR021284 Protein of unknown function DUF2750 CVS42_RS01960 880e39595a73c12519286f8bfcc9be45 81 Pfam PF12292 Protein of unknown function (DUF3624) 1 73 1.2E-24 T 29-03-2018 IPR022072 Protein of unknown function DUF3624 CVS42_RS06110 1efdb018246ab67cf020b073db8fde17 292 Pfam PF11726 Inovirus Gp2 113 261 1.7E-15 T 29-03-2018 CVS42_RS15980 db2783cd5b2e5b317330f0eeb59720f7 60 Pfam PF12065 Protein of unknown function (DUF3545) 1 58 1.3E-18 T 29-03-2018 IPR021932 Protein of unknown function DUF3545 CVS42_RS09825 5ce58d27cd058151c8a7c0edff7b6976 73 Pfam PF11197 Protein of unknown function (DUF2835) 4 71 7.8E-23 T 29-03-2018 IPR021363 Protein of unknown function DUF2835 CVS42_RS14405 b1bf028dfe90e9703919399b4940206f 341 Pfam PF00953 Glycosyl transferase family 4 80 231 2.2E-35 T 29-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CVS42_RS07290 cedd734c082b649861d2a9a71335f121 376 Pfam PF04245 37-kD nucleoid-associated bacterial protein 36 369 5.6E-92 T 29-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CVS42_RS12435 60b0908a487c92015fb9ab7881d068c7 172 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 22 164 8.5E-45 T 29-03-2018 IPR018639 Domain of unknown function DUF2062 CVS42_RS14785 2254751e21d174a13aff6f3bb6d43d54 132 Pfam PF03724 META domain 26 125 7.0E-25 T 29-03-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ CVS42_RS22045 eb3bfeeda5b271152fa87908de07edac 133 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 132 4.8E-35 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CVS42_RS12060 9190eb397180ec0905e76382be4ba5ee 252 Pfam PF01618 MotA/TolQ/ExbB proton channel family 98 216 2.0E-24 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CVS42_RS09090 5e6239b21d8f3e026ffae48dacedb5c6 62 Pfam PF14056 Domain of unknown function (DUF4250) 8 61 6.6E-24 T 29-03-2018 IPR025346 Protein of unknown function DUF4250 CVS42_RS15190 ea79bc199842ab2cd9e4d42d4ca955f4 227 Pfam PF11726 Inovirus Gp2 40 225 8.6E-55 T 29-03-2018 CVS42_RS11820 ba1a9b9eb6eae2a3aacfc6da3bffe3be 153 Pfam PF10722 Putative bacterial sensory transduction regulator 9 134 7.4E-12 T 29-03-2018 IPR019660 Putative sensory transduction regulator YbjN CVS42_RS11595 4509ffe2f057ed44fefb9eb8cb22cefb 31 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 5 28 5.7E-6 T 29-03-2018 CVS42_RS19780 2804126229c4f700d1f9d30189b0cde4 133 Pfam PF03788 LrgA family 22 115 6.3E-27 T 29-03-2018 IPR005538 LrgA/CidA family GO:0016021