locus-tag class description APE_0002 IPR036390 Winged helix DNA-binding domain superfamily APE_0002 IPR011991 ArsR-like helix-turn-helix domain APE_0002 IPR005149 Transcription regulator PadR, N-terminal APE_0002 IPR036388 Winged helix-like DNA-binding domain superfamily APE_0009.1 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ APE_0009.1 IPR006122 Heavy metal-associated domain, copper ion-binding APE_0009.1 IPR006121 Heavy metal-associated domain, HMA APE_0009.1 IPR036163 Heavy metal-associated domain superfamily APE_0009.1 IPR017969 Heavy-metal-associated, conserved site APE_0010.1 IPR002293 Amino acid/polyamine transporter I APE_0011.1 IPR013785 Aldolase-type TIM barrel APE_0011.1 IPR002915 DeoC/FbaB/ lacD aldolase APE_0011.1 IPR041720 Aldolase FbaB-like, archaeal-type APE_0011.1 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase APE_0012 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes APE_0012 IPR029056 Ribokinase-like APE_0012 IPR011611 Carbohydrate kinase PfkB APE_0012 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily APE_0012 IPR030830 5-Dehydro-2-deoxygluconokinase APE_0012 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site APE_0013.1 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase APE_0013.1 IPR037237 IlvD/EDD, N-terminal domain APE_0013.1 IPR004404 Dihydroxy-acid dehydratase APE_0013.1 IPR042096 Dihydroxy-acid dehydratase, C-terminal APE_0013.1 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site APE_0017.1 IPR006002 Gluconate kinase APE_0017.1 IPR018484 Carbohydrate kinase, FGGY, N-terminal APE_0017.1 IPR018483 Carbohydrate kinase, FGGY, conserved site APE_0017.1 IPR018485 Carbohydrate kinase, FGGY, C-terminal APE_0017.1 IPR000577 Carbohydrate kinase, FGGY APE_0020.1 IPR002129 Pyridoxal phosphate-dependent decarboxylase APE_0020.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_0020.1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_0020.1 IPR021115 Pyridoxal-phosphate binding site APE_0026 IPR008279 PEP-utilising enzyme, mobile domain APE_0026 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding APE_0026 IPR036637 Phosphohistidine domain superfamily APE_0026 IPR013815 ATP-grasp fold, subdomain 1 APE_0028 IPR008279 PEP-utilising enzyme, mobile domain APE_0028 IPR036637 Phosphohistidine domain superfamily APE_0028 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding APE_0028 IPR013815 ATP-grasp fold, subdomain 1 APE_0031.1 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG APE_0031.1 IPR005829 Sugar transporter, conserved site APE_0031.1 IPR036388 Winged helix-like DNA-binding domain superfamily APE_0031.1 IPR036390 Winged helix DNA-binding domain superfamily APE_0031.1 IPR036259 MFS transporter superfamily APE_0031.1 IPR020846 Major facilitator superfamily domain APE_0031.1 IPR011701 Major facilitator superfamily APE_0033.1 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal APE_0033.1 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal APE_0033.1 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site APE_0033.1 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising APE_0035.1 IPR006059 Bacterial extracellular solute-binding protein APE_0035.1 IPR006061 Solute-binding family 1, conserved site APE_0038.1 IPR035906 MetI-like superfamily APE_0038.1 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_0040.1 IPR035906 MetI-like superfamily APE_0040.1 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_0043.1 IPR005116 Transport-associated OB, type 1 APE_0043.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0043.1 IPR040582 MalK, OB fold domain APE_0043.1 IPR008995 Molybdate/tungstate binding, C-terminal APE_0043.1 IPR003593 AAA+ ATPase domain APE_0043.1 IPR003439 ABC transporter-like APE_0043.1 IPR017871 ABC transporter, conserved site APE_0045 IPR024370 PBP domain APE_0047.1 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_0047.1 IPR035906 MetI-like superfamily APE_0047.1 IPR011864 Phosphate ABC transporter, permease protein PstC APE_0048 IPR005672 Phosphate transport system permease protein PstA APE_0048 IPR035906 MetI-like superfamily APE_0048 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_0050 IPR003439 ABC transporter-like APE_0050 IPR017871 ABC transporter, conserved site APE_0050 IPR015850 ABC transporter, phosphate import, PstB APE_0050 IPR003593 AAA+ ATPase domain APE_0050 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0050 IPR005670 Phosphate transport system permease protein 1 APE_0051 IPR028366 Phosphate transport system protein PhoU APE_0051 IPR038078 PhoU-like domain superfamily APE_0051 IPR026022 PhoU domain APE_0053.1 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily APE_0053.1 IPR011234 Fumarylacetoacetase-like, C-terminal APE_0056.1 IPR029045 ClpP/crotonase-like domain superfamily APE_0056.1 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site APE_0056.1 IPR001753 Enoyl-CoA hydratase/isomerase APE_0056.1 IPR014748 Enoyl-CoA hydratase, C-terminal APE_0060.1 IPR005764 Adenine phosphoribosyl transferase APE_0060.1 IPR029057 Phosphoribosyltransferase-like APE_0060.1 IPR000836 Phosphoribosyltransferase domain APE_0063 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0063 IPR015861 ABC transporter, ribose import, RbsA APE_0063 IPR017871 ABC transporter, conserved site APE_0063 IPR003439 ABC transporter-like APE_0063 IPR003593 AAA+ ATPase domain APE_0067.1 IPR001851 ABC transporter, permease APE_0071.1 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily APE_0071.1 IPR000572 Oxidoreductase, molybdopterin-binding domain APE_0072 IPR002541 Cytochrome c assembly protein APE_0072 IPR017562 Cytochrome c-type biogenesis protein CcsA APE_0077 IPR036425 MoaB/Mog-like domain superfamily APE_0077 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA APE_0077 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily APE_0077 IPR001453 MoaB/Mog domain APE_0077 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain APE_0077 IPR023045 Molybdenum cofactor biosynthesis C APE_0077 IPR008284 Molybdenum cofactor biosynthesis, conserved site APE_0079 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic APE_0079 IPR016067 S-adenosylmethionine decarboxylase, core APE_0079 IPR017716 S-adenosylmethionine decarboxylase proenzyme APE_0084.1 IPR000415 Nitroreductase-like APE_0084.1 IPR016446 Flavin oxidoreductase Frp family APE_0084.1 IPR029479 Nitroreductase APE_0085.1 IPR004805 DNA polymerase III, alpha subunit APE_0085.1 IPR003141 Polymerase/histidinol phosphatase, N-terminal APE_0085.1 IPR029460 DNA polymerase, helix-hairpin-helix motif APE_0085.1 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain APE_0085.1 IPR040982 DNA polymerase III alpha subunit finger domain APE_0085.1 IPR023073 DNA polymerase, error-prone APE_0085.1 IPR016195 Polymerase/histidinol phosphatase-like APE_0085.1 IPR004013 PHP domain APE_0086 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APE_0086 IPR024706 Peroxiredoxin, AhpC-type APE_0086 IPR036249 Thioredoxin-like superfamily APE_0086 IPR013766 Thioredoxin domain APE_0089.1 IPR002510 Metalloprotease TldD/PmbA APE_0089.1 IPR025502 TldD APE_0089.1 IPR035068 Metalloprotease TldD/PmbA, N-terminal APE_0089.1 IPR036059 Metalloprotease TldD/PmbA superfamily APE_0092.1 IPR023696 Ureohydrolase domain superfamily APE_0092.1 IPR037138 Histone deacetylase domain superfamily APE_0092.1 IPR023801 Histone deacetylase domain APE_0092.1 IPR000286 Histone deacetylase family APE_0099 IPR036397 Ribonuclease H superfamily APE_0099 IPR012337 Ribonuclease H-like superfamily APE_0099 IPR023211 DNA polymerase, palm domain superfamily APE_0099 IPR042087 DNA polymerase family B, C-terminal domain APE_0099 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain APE_0099 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain APE_0099 IPR017964 DNA-directed DNA polymerase, family B, conserved site APE_0099 IPR006172 DNA-directed DNA polymerase, family B APE_0101.1 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APE_0101.1 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APE_0101.1 IPR036197 NarG-like superfamily APE_0101.1 IPR004017 Cysteine-rich domain APE_0101.1 IPR009051 Alpha-helical ferredoxin APE_0101.1 IPR023234 NarG-like domain APE_0105 IPR006073 GTP binding domain APE_0105 IPR016478 GTPase, MTG1 APE_0105 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0105 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily APE_0105 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain APE_0105 IPR019991 GTP-binding protein, ribosome biogenesis APE_0110 IPR013134 RAD50, zinc hook APE_0110 IPR003959 ATPase, AAA-type, core APE_0110 IPR003959 ATPase, AAA-type, core APE_0110 IPR029012 Helix hairpin bin domain superfamily APE_0110 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0110 IPR013134 RAD50, zinc hook APE_0110 IPR029012 Helix hairpin bin domain superfamily APE_0110 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0117.1 IPR012676 TGS-like APE_0117.1 IPR002320 Threonine-tRNA ligase, class IIa APE_0117.1 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily APE_0117.1 IPR006195 Aminoacyl-tRNA synthetase, class II APE_0117.1 IPR004095 TGS APE_0117.1 IPR012675 Beta-grasp domain superfamily APE_0117.1 IPR036621 Anticodon-binding domain superfamily APE_0117.1 IPR004154 Anticodon-binding APE_0117.1 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) APE_0117.1 IPR033728 Threonine-tRNA ligase catalytic core domain APE_0117.1 IPR012947 Threonyl/alanyl tRNA synthetase, SAD APE_0119 IPR003593 AAA+ ATPase domain APE_0119 IPR004504 DNA repair protein RadA APE_0119 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0119 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain APE_0119 IPR020568 Ribosomal protein S5 domain 2-type fold APE_0119 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_0119 IPR041166 LapB, rubredoxin metal binding domain APE_0122.1 IPR036265 HIT-like superfamily APE_0122.1 IPR011146 HIT-like domain APE_0122.1 IPR001310 Histidine triad (HIT) protein APE_0122.1 IPR039383 FHIT family APE_0127 IPR011703 ATPase, AAA-3 APE_0127 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0127 IPR041628 ChlI/MoxR, AAA lid domain APE_0134.1 IPR012255 Electron transfer flavoprotein, beta subunit APE_0134.1 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site APE_0134.1 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal APE_0134.1 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal APE_0134.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_0135 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site APE_0135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_0135 IPR029035 DHS-like NAD/FAD-binding domain superfamily APE_0135 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal APE_0135 IPR001308 Electron transfer flavoprotein alpha subunit/FixB APE_0135 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal APE_0137 IPR000101 Gamma-glutamyltranspeptidase APE_0137 IPR029055 Nucleophile aminohydrolases, N-terminal APE_0141.1 IPR002478 PUA domain APE_0141.1 IPR041532 RlmI, PUA-like domain APE_0141.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_0141.1 IPR019614 S-adenosylmethionine-dependent methyltransferase APE_0141.1 IPR023542 rRNA large subunit methyltransferase I APE_0141.1 IPR015947 PUA-like superfamily APE_0141.1 IPR036974 PUA domain superfamily APE_0146.1 IPR000304 Pyrroline-5-carboxylate reductase APE_0146.1 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APE_0146.1 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal APE_0146.1 IPR036291 NAD(P)-binding domain superfamily APE_0146.1 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain APE_0150.1 IPR005759 Endonuclease III APE_0150.1 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APE_0150.1 IPR000445 Helix-hairpin-helix motif APE_0150.1 IPR003265 HhH-GPD domain APE_0150.1 IPR004035 Endonuclease III, iron-sulphur binding site APE_0150.1 IPR004036 Endonuclease III-like, conserved site-2 APE_0150.1 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif APE_0150.1 IPR011257 DNA glycosylase APE_0159 IPR006369 Protohaem IX farnesyltransferase APE_0159 IPR000537 UbiA prenyltransferase family APE_0163.1 IPR016160 Aldehyde dehydrogenase, cysteine active site APE_0163.1 IPR016163 Aldehyde dehydrogenase, C-terminal APE_0163.1 IPR016162 Aldehyde dehydrogenase, N-terminal APE_0163.1 IPR016161 Aldehyde/histidinol dehydrogenase APE_0163.1 IPR015590 Aldehyde dehydrogenase domain APE_0169.1 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APE_0169.1 IPR004839 Aminotransferase, class I/classII APE_0169.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_0169.1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_0171.1 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain APE_0171.1 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain APE_0171.1 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site APE_0171.1 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family APE_0171.1 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I APE_0171.1 IPR036291 NAD(P)-binding domain superfamily APE_0173.1 IPR015911 Phosphoglycerate kinase, conserved site APE_0173.1 IPR036043 Phosphoglycerate kinase superfamily APE_0173.1 IPR015824 Phosphoglycerate kinase, N-terminal APE_0173.1 IPR001576 Phosphoglycerate kinase APE_0179 IPR029044 Nucleotide-diphospho-sugar transferases APE_0179 IPR013482 Molybdenum cofactor guanylyltransferase APE_0179 IPR025877 MobA-like NTP transferase APE_0181 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain APE_0181 IPR022712 Beta-Casp domain APE_0181 IPR001279 Metallo-beta-lactamase APE_0181 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APE_0182.1 IPR005228 Conserved hypothetical protein CHP00251 APE_0182.1 IPR036591 YggU-like superfamily APE_0182.1 IPR003746 Protein of unknown function DUF167 APE_0191.1 IPR014001 Helicase superfamily 1/2, ATP-binding domain APE_0191.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0191.1 IPR011545 DEAD/DEAH box helicase domain APE_0191.1 IPR001650 Helicase, C-terminal APE_0191.1 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal APE_0193.1 IPR036291 NAD(P)-binding domain superfamily APE_0193.1 IPR001509 NAD-dependent epimerase/dehydratase APE_0204.1 IPR042080 RNA 2'-phosphotransferase, N-terminal domain APE_0204.1 IPR022928 RNA 2'-phosphotransferase KptA, putative APE_0204.1 IPR002745 Phosphotransferase KptA/Tpt1 APE_0204.1 IPR042081 RNA 2'-phosphotransferase, C-terminal domain APE_0212.1 IPR001431 Peptidase M16, zinc-binding site APE_0212.1 IPR011765 Peptidase M16, N-terminal APE_0212.1 IPR007863 Peptidase M16, C-terminal APE_0212.1 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like APE_0216.1 IPR010233 Ubiquinone biosynthesis O-methyltransferase APE_0216.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_0218 IPR002171 Ribosomal protein L2 APE_0218 IPR014722 Ribosomal protein L2, domain 2 APE_0218 IPR022666 Ribosomal Proteins L2, RNA binding domain APE_0218 IPR012340 Nucleic acid-binding, OB-fold APE_0218 IPR022669 Ribosomal protein L2, C-terminal APE_0218 IPR008991 Translation protein SH3-like domain superfamily APE_0218 IPR014726 Ribosomal protein L2, domain 3 APE_0218 IPR005880 Ribosomal protein L2, bacterial/organellar-type APE_0218 IPR022671 Ribosomal protein L2, conserved site APE_0222.1 IPR012695 2-methylisocitrate lyase APE_0222.1 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APE_0222.1 IPR040442 Pyruvate kinase-like domain superfamily APE_0222.1 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site APE_0222.1 IPR039556 ICL/PEPM domain APE_0227 IPR000597 Ribosomal protein L3 APE_0227 IPR019927 Ribosomal protein L3, bacterial/organelle-type APE_0227 IPR009000 Translation protein, beta-barrel domain superfamily APE_0227 IPR019926 Ribosomal protein L3, conserved site APE_0228a.1 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily APE_0228a.1 IPR012678 Ribosomal protein L23/L15e core domain superfamily APE_0228a.1 IPR001014 Ribosomal protein L23/L25, conserved site APE_0228a.1 IPR013025 Ribosomal protein L25/L23 APE_0230.1 IPR019591 Mrp/NBP35 ATP-binding protein APE_0230.1 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 APE_0230.1 IPR034904 Fe-S cluster assembly domain superfamily APE_0230.1 IPR000808 Mrp, conserved site APE_0230.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0231 IPR000524 Transcription regulator HTH, GntR APE_0231 IPR006683 Thioesterase domain APE_0231 IPR029069 HotDog domain superfamily APE_0231 IPR036388 Winged helix-like DNA-binding domain superfamily APE_0231 IPR036390 Winged helix DNA-binding domain superfamily APE_0231 IPR000644 CBS domain APE_0231 IPR010766 DRTGG APE_0231 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily APE_0236.1 IPR028281 Siroheme synthase, central domain APE_0236.1 IPR019478 Sirohaem synthase, dimerisation domain APE_0236.1 IPR036291 NAD(P)-binding domain superfamily APE_0236.1 IPR006367 Sirohaem synthase, N-terminal APE_0236.1 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site APE_0236.1 IPR012409 Sirohaem synthase APE_0236.1 IPR000878 Tetrapyrrole methylase APE_0236.1 IPR014776 Tetrapyrrole methylase, subdomain 2 APE_0236.1 IPR035996 Tetrapyrrole methylase superfamily APE_0236.1 IPR014777 Tetrapyrrole methylase, subdomain 1 APE_0236.1 IPR006366 Uroporphyrin-III C-methyltransferase APE_0244.1 IPR021196 PdxT/SNO family, conserved site APE_0244.1 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO APE_0244.1 IPR029062 Class I glutamine amidotransferase-like APE_0246.1 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ APE_0246.1 IPR011060 Ribulose-phosphate binding barrel APE_0246.1 IPR033755 PdxS/SNZ N-terminal domain APE_0246.1 IPR013785 Aldolase-type TIM barrel APE_0248.1 IPR003773 Menaquinone biosynthesis enzyme APE_0248.1 IPR030869 1,4-dihydroxy-6-naphtoate synthase APE_0249.1 IPR034405 F420, menaquinone cofactor biosynthesis APE_0249.1 IPR006638 Elp3/MiaB/NifB APE_0249.1 IPR020050 FO synthase, subunit 2 APE_0249.1 IPR007197 Radical SAM APE_0249.1 IPR013785 Aldolase-type TIM barrel APE_0249.1 IPR022432 Aminodeoxyfutalosine synthase APE_0252 IPR013785 Aldolase-type TIM barrel APE_0252 IPR022432 Aminodeoxyfutalosine synthase APE_0252 IPR006638 Elp3/MiaB/NifB APE_0252 IPR034405 F420, menaquinone cofactor biosynthesis APE_0252 IPR020050 FO synthase, subunit 2 APE_0252 IPR007197 Radical SAM APE_0255.1 IPR013446 Glucose-1-phosphate cytidylyltransferase APE_0255.1 IPR005835 Nucleotidyl transferase domain APE_0255.1 IPR029044 Nucleotide-diphospho-sugar transferases APE_0258.1 IPR037171 NagB/RpiA transferase-like APE_0258.1 IPR022825 Lactate utilization protein B APE_0258.1 IPR003741 LUD domain APE_0258.1 IPR009051 Alpha-helical ferredoxin APE_0258.1 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily APE_0258.1 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APE_0258.1 IPR024569 4Fe-4S binding protein, C-terminal APE_0258.1 IPR004452 4Fe-4S binding protein APE_0258.1 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APE_0260.1 IPR013785 Aldolase-type TIM barrel APE_0260.1 IPR033888 Dihydroorotate dehydrogenase, class 1B APE_0260.1 IPR023359 Dihydroorotate dehydrogenase A, chain A, domain 2 APE_0260.1 IPR005720 Dihydroorotate dehydrogenase domain APE_0260.1 IPR024920 Dihydroorotate dehydrogenase, class 1 APE_0260.1 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 APE_0260.1 IPR001295 Dihydroorotate dehydrogenase, conserved site APE_0261.1 IPR032466 Metal-dependent hydrolase APE_0261.1 IPR006680 Amidohydrolase-related APE_0261.1 IPR004722 Dihydroorotase APE_0261.1 IPR002195 Dihydroorotase, conserved site APE_0261.1 IPR011059 Metal-dependent hydrolase, composite domain superfamily APE_0262 IPR030395 Glycerophosphodiester phosphodiesterase domain APE_0262 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily APE_0263.1 IPR034202 Subtilisin Carlsberg-like catalytic domain APE_0263.1 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily APE_0263.1 IPR022398 Peptidase S8, subtilisin, His-active site APE_0263.1 IPR023828 Peptidase S8, subtilisin, Ser-active site APE_0263.1 IPR000209 Peptidase S8/S53 domain APE_0263.1 IPR036852 Peptidase S8/S53 domain superfamily APE_0263.1 IPR023827 Peptidase S8, subtilisin, Asp-active site APE_0263.1 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 APE_0263.1 IPR015500 Peptidase S8, subtilisin-related APE_0267 IPR000644 CBS domain APE_0270.1 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_0270.1 IPR011867 Molybdate ABC transporter, permease protein APE_0270.1 IPR006469 NifC-like ABC-type porter APE_0270.1 IPR035906 MetI-like superfamily APE_0272.1 IPR005950 Molybdate ABC transporter, substrate-binding protein APE_0288 IPR000835 MarR-type HTH domain APE_0288 IPR036388 Winged helix-like DNA-binding domain superfamily APE_0288 IPR036390 Winged helix DNA-binding domain superfamily APE_0291 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APE_0291 IPR024706 Peroxiredoxin, AhpC-type APE_0291 IPR036249 Thioredoxin-like superfamily APE_0291 IPR013766 Thioredoxin domain APE_0300.1 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APE_0300.1 IPR017871 ABC transporter, conserved site APE_0300.1 IPR003439 ABC transporter-like APE_0300.1 IPR003593 AAA+ ATPase domain APE_0300.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0301.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0301.1 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APE_0301.1 IPR003439 ABC transporter-like APE_0301.1 IPR003593 AAA+ ATPase domain APE_0301.1 IPR017871 ABC transporter, conserved site APE_0302.1 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_0302.1 IPR035906 MetI-like superfamily APE_0302.1 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APE_0303 IPR035906 MetI-like superfamily APE_0303 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_0304.1 IPR030678 Peptide/nickel binding protein, MppA-type APE_0304.1 IPR000914 Solute-binding protein family 5 domain APE_0304.1 IPR023765 Solute-binding protein family 5, conserved site APE_0304.1 IPR039424 Solute-binding protein family 5 APE_0306.1 IPR018485 Carbohydrate kinase, FGGY, C-terminal APE_0306.1 IPR000577 Carbohydrate kinase, FGGY APE_0306.1 IPR018483 Carbohydrate kinase, FGGY, conserved site APE_0306.1 IPR018484 Carbohydrate kinase, FGGY, N-terminal APE_0306.1 IPR005999 Glycerol kinase APE_0308.1 IPR004113 FAD-linked oxidase, C-terminal APE_0308.1 IPR004490 Glycolate oxidase subunit GlcD APE_0308.1 IPR006094 FAD linked oxidase, N-terminal APE_0308.1 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 APE_0308.1 IPR016166 FAD-binding domain, PCMH-type APE_0308.1 IPR016164 FAD-linked oxidase-like, C-terminal APE_0308.1 IPR036318 FAD-binding, type PCMH-like superfamily APE_0309.1 IPR036188 FAD/NAD(P)-binding domain superfamily APE_0313.1 IPR023370 TrmO-like, N-terminal domain APE_0313.1 IPR023368 Uncharacterised protein family UPF0066, conserved site APE_0313.1 IPR036414 YaeB, N-terminal domain superfamily APE_0313.1 IPR036413 YaeB-like superfamily APE_0313.1 IPR040372 YaeB-like APE_0316.1 IPR005925 Agmatinase-related APE_0316.1 IPR006035 Ureohydrolase APE_0316.1 IPR023696 Ureohydrolase domain superfamily APE_0316.1 IPR020855 Ureohydrolase, manganese-binding site APE_0317.1 IPR005843 Alpha-D-phosphohexomutase, C-terminal APE_0317.1 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III APE_0317.1 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III APE_0317.1 IPR006352 Phosphoglucosamine mutase, bacterial type APE_0317.1 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II APE_0317.1 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I APE_0317.1 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily APE_0317.1 IPR016066 Alpha-D-phosphohexomutase, conserved site APE_0317.1 IPR005841 Alpha-D-phosphohexomutase superfamily APE_0319 IPR002818 DJ-1/PfpI APE_0319 IPR029062 Class I glutamine amidotransferase-like APE_0319 IPR006286 Deglycase PfpI APE_0320.1 IPR001080 3Fe-4S ferredoxin APE_0320.1 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APE_0320.1 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APE_0326.1 IPR003593 AAA+ ATPase domain APE_0326.1 IPR037219 Peptidase M41-like APE_0326.1 IPR000642 Peptidase M41 APE_0326.1 IPR005936 Peptidase, FtsH APE_0326.1 IPR003960 ATPase, AAA-type, conserved site APE_0326.1 IPR003959 ATPase, AAA-type, core APE_0326.1 IPR041569 AAA ATPase, AAA+ lid domain APE_0326.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0333.1 IPR033704 dUTPase, trimeric APE_0333.1 IPR036157 dUTPase-like superfamily APE_0333.1 IPR029054 dUTPase-like APE_0333.1 IPR011962 dCTP deaminase APE_0336.1 IPR014395 Penicillin/GL-7-ACA/AHL acylase APE_0336.1 IPR029055 Nucleophile aminohydrolases, N-terminal APE_0336.1 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase APE_0336.1 IPR023343 Penicillin amidase type, domain 1 APE_0338.1 IPR021860 Peptidase S12, Pab87-related, C-terminal APE_0338.1 IPR012338 Beta-lactamase/transpeptidase-like APE_0338.1 IPR001466 Beta-lactamase-related APE_0342.1 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain APE_0342.1 IPR006683 Thioesterase domain APE_0342.1 IPR029069 HotDog domain superfamily APE_0342.1 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase APE_0346 IPR013810 Ribosomal protein S5, N-terminal APE_0346 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_0346 IPR020568 Ribosomal protein S5 domain 2-type fold APE_0346 IPR005324 Ribosomal protein S5, C-terminal APE_0346 IPR005712 Ribosomal protein S5, bacterial-type APE_0346 IPR000851 Ribosomal protein S5 APE_0346 IPR018192 Ribosomal protein S5, N-terminal, conserved site APE_0350 IPR002358 Ribosomal protein L6, conserved site APE_0350 IPR000702 Ribosomal protein L6 APE_0350 IPR020040 Ribosomal protein L6, alpha-beta domain APE_0350 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily APE_0350 IPR019906 Ribosomal protein L6, bacterial-type APE_0352.1 IPR000630 Ribosomal protein S8 APE_0352.1 IPR035987 Ribosomal protein S8 superfamily APE_0354.1 IPR020930 Ribosomal protein L5, bacterial-type APE_0354.1 IPR031309 Ribosomal protein L5, C-terminal APE_0354.1 IPR022803 Ribosomal protein L5 domain superfamily APE_0354.1 IPR002132 Ribosomal protein L5 APE_0354.1 IPR031310 Ribosomal protein L5, N-terminal APE_0356.1 IPR036986 RNA-binding S4 domain superfamily APE_0356.1 IPR022801 Ribosomal protein S4/S9 APE_0356.1 IPR018079 Ribosomal protein S4, conserved site APE_0356.1 IPR002942 RNA-binding S4 domain APE_0356.1 IPR005709 Ribosomal protein S4, bacterial-type APE_0356.1 IPR001912 Ribosomal protein S4/S9, N-terminal APE_0358 IPR008991 Translation protein SH3-like domain superfamily APE_0358 IPR005824 KOW APE_0358 IPR041988 Ribosomal Protein L26/L24, KOW domain APE_0358 IPR014722 Ribosomal protein L2, domain 2 APE_0358 IPR003256 Ribosomal protein L24 APE_0358 IPR005825 Ribosomal protein L24/L26, conserved site APE_0359 IPR019972 Ribosomal protein L14P, conserved site APE_0359 IPR036853 Ribosomal protein L14 superfamily APE_0359 IPR005745 Ribosomal protein L14P, bacterial-type APE_0359 IPR000218 Ribosomal protein L14P APE_0360.1 IPR000266 Ribosomal protein S17/S11 APE_0360.1 IPR019984 30S ribosomal protein S17 APE_0360.1 IPR012340 Nucleic acid-binding, OB-fold APE_0362a IPR036049 Ribosomal protein L29/L35 superfamily APE_0362a IPR001854 Ribosomal protein L29/L35 APE_0362a IPR018254 Ribosomal protein L29, conserved site APE_0363 IPR004087 K Homology domain APE_0363 IPR015946 K homology domain-like, alpha/beta APE_0363 IPR001351 Ribosomal protein S3, C-terminal APE_0363 IPR005704 Ribosomal protein S3, bacterial-type APE_0363 IPR009019 K homology domain superfamily, prokaryotic type APE_0363 IPR004044 K Homology domain, type 2 APE_0363 IPR036419 Ribosomal protein S3, C-terminal domain superfamily APE_0363 IPR018280 Ribosomal protein S3, conserved site APE_0365 IPR001063 Ribosomal protein L22/L17 APE_0365 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type APE_0365 IPR036394 Ribosomal protein L22/L17 superfamily APE_0365 IPR018260 Ribosomal protein L22/L17, conserved site APE_0367.1 IPR002222 Ribosomal protein S19/S15 APE_0367.1 IPR005732 Ribosomal protein S19, bacterial-type APE_0367.1 IPR020934 Ribosomal protein S19 conserved site APE_0367.1 IPR023575 Ribosomal protein S19, superfamily APE_0374 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APE_0374 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_0374 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding APE_0374 IPR023586 Isoleucine-tRNA ligase, type 2 APE_0374 IPR002301 Isoleucine-tRNA ligase APE_0374 IPR033709 Isoleucyl tRNA synthetase type 2, anticodon-binding domain APE_0374 IPR002300 Aminoacyl-tRNA synthetase, class Ia APE_0374 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APE_0374 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain APE_0382 IPR001279 Metallo-beta-lactamase APE_0382 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APE_0383.1 IPR035474 KpsF-like, SIS domain APE_0383.1 IPR001347 Sugar isomerase (SIS) APE_0383.1 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type APE_0383.1 IPR000644 CBS domain APE_0385.1 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APE_0385.1 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain APE_0385.1 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APE_0385.1 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APE_0385.1 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APE_0385.1 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APE_0385.1 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APE_0392 IPR012302 Malic enzyme, NAD-binding APE_0392 IPR037062 Malic enzyme, N-terminal domain superfamily APE_0392 IPR036291 NAD(P)-binding domain superfamily APE_0392 IPR012301 Malic enzyme, N-terminal domain APE_0392 IPR001891 Malic oxidoreductase APE_0392 IPR015884 Malic enzyme, conserved site APE_0392 IPR002912 ACT domain APE_0396.1 IPR025110 AMP-binding enzyme, C-terminal domain APE_0396.1 IPR020845 AMP-binding, conserved site APE_0396.1 IPR000873 AMP-dependent synthetase/ligase APE_0396.1 IPR042099 AMP-dependent synthetase-like superfamily APE_0401.1 IPR001048 Aspartate/glutamate/uridylate kinase APE_0401.1 IPR011817 Uridylate kinase APE_0401.1 IPR015963 Uridylate kinase, bacteria APE_0401.1 IPR036393 Acetylglutamate kinase-like superfamily APE_0402.1 IPR002699 ATPase, V1 complex, subunit D APE_0404.1 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site APE_0404.1 IPR022879 V-type ATP synthase regulatory subunit B/beta APE_0404.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0404.1 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain APE_0404.1 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily APE_0404.1 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain APE_0405.1 IPR022878 V-type ATP synthase catalytic alpha chain APE_0405.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0405.1 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal APE_0405.1 IPR003593 AAA+ ATPase domain APE_0405.1 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension APE_0405.1 IPR005726 ATP synthase alpha chain, archaea APE_0405.1 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily APE_0405.1 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site APE_0405.1 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain APE_0405.1 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain APE_0405.1 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily APE_0412 IPR002129 Pyridoxal phosphate-dependent decarboxylase APE_0412 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent APE_0412 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_0412 IPR015424 Pyridoxal phosphate-dependent transferase APE_0413 IPR001650 Helicase, C-terminal APE_0413 IPR014001 Helicase superfamily 1/2, ATP-binding domain APE_0413 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0413 IPR038718 SNF2-like, N-terminal domain superfamily APE_0413 IPR000330 SNF2-related, N-terminal domain APE_0423.1 IPR001130 TatD family APE_0423.1 IPR032466 Metal-dependent hydrolase APE_0423.1 IPR018228 Deoxyribonuclease, TatD-related, conserved site APE_0426.1 IPR029044 Nucleotide-diphospho-sugar transferases APE_0426.1 IPR001173 Glycosyltransferase 2-like APE_0427.1 IPR005122 Uracil-DNA glycosylase-like APE_0427.1 IPR005273 Uracil-DNA glycosylase family 4 APE_0427.1 IPR036895 Uracil-DNA glycosylase-like domain superfamily APE_0436.1 IPR036612 K Homology domain, type 1 superfamily APE_0436.1 IPR012340 Nucleic acid-binding, OB-fold APE_0436.1 IPR012162 Polyribonucleotide nucleotidyltransferase APE_0436.1 IPR001247 Exoribonuclease, phosphorolytic domain 1 APE_0436.1 IPR027408 PNPase/RNase PH domain superfamily APE_0436.1 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain APE_0436.1 IPR036345 Exoribonuclease, PH domain 2 superfamily APE_0436.1 IPR022967 RNA-binding domain, S1 APE_0436.1 IPR003029 S1 domain APE_0436.1 IPR020568 Ribosomal protein S5 domain 2-type fold APE_0436.1 IPR015847 Exoribonuclease, phosphorolytic domain 2 APE_0436.1 IPR004087 K Homology domain APE_0436.1 IPR004088 K Homology domain, type 1 APE_0445 IPR022967 RNA-binding domain, S1 APE_0445 IPR012340 Nucleic acid-binding, OB-fold APE_0445 IPR003029 S1 domain APE_0449 IPR020798 Ribosomal protein L16, conserved site APE_0449 IPR036920 Ribosomal protein L10e/L16 superfamily APE_0449 IPR016180 Ribosomal protein L10e/L16 APE_0449 IPR000114 Ribosomal protein L16 APE_0450 IPR036135 MoeA, N-terminal and linker domain superfamily APE_0450 IPR005110 MoeA, N-terminal and linker domain APE_0450 IPR036688 MoeA, C-terminal, domain IV superfamily APE_0450 IPR005111 MoeA, C-terminal, domain IV APE_0450 IPR038987 Molybdopterin biosynthesis protein MoeA-like APE_0450 IPR036425 MoaB/Mog-like domain superfamily APE_0450 IPR001453 MoaB/Mog domain APE_0454 IPR041465 SfsA, N-terminal OB domain APE_0454 IPR040452 Sugar fermentation stimulation protein, C-terminal APE_0454 IPR005224 Sugar fermentation stimulation protein APE_0457 IPR015424 Pyridoxal phosphate-dependent transferase APE_0457 IPR004632 4-aminobutyrate aminotransferase, bacterial APE_0457 IPR005814 Aminotransferase class-III APE_0457 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APE_0457 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_0465.1 IPR001763 Rhodanese-like domain APE_0465.1 IPR004114 THUMP domain APE_0465.1 IPR036873 Rhodanese-like domain superfamily APE_0465.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_0465.1 IPR026340 Thiazole biosynthesis domain APE_0465.1 IPR003720 tRNA sulfurtransferase ThiI APE_0465.1 IPR020536 Thil, AANH domain APE_0471.1 IPR003593 AAA+ ATPase domain APE_0471.1 IPR003439 ABC transporter-like APE_0471.1 IPR017871 ABC transporter, conserved site APE_0471.1 IPR025302 Domain of unknown function DUF4162 APE_0471.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0475.1 IPR009000 Translation protein, beta-barrel domain superfamily APE_0475.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0475.1 IPR031157 Tr-type G domain, conserved site APE_0475.1 IPR011779 Sulphate adenylyltransferase, large subunit APE_0475.1 IPR002891 Adenylyl-sulfate kinase APE_0475.1 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APE_0475.1 IPR000795 Transcription factor, GTP-binding domain APE_0475.1 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain APE_0478.1 IPR006638 Elp3/MiaB/NifB APE_0478.1 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site APE_0478.1 IPR010505 Molybdenum cofactor synthesis C-terminal APE_0478.1 IPR007197 Radical SAM APE_0478.1 IPR013785 Aldolase-type TIM barrel APE_0478.1 IPR013483 Molybdenum cofactor biosynthesis protein A APE_0487 IPR006094 FAD linked oxidase, N-terminal APE_0487 IPR036318 FAD-binding, type PCMH-like superfamily APE_0487 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 APE_0487 IPR004490 Glycolate oxidase subunit GlcD APE_0487 IPR016166 FAD-binding domain, PCMH-type APE_0487 IPR004113 FAD-linked oxidase, C-terminal APE_0487 IPR016164 FAD-linked oxidase-like, C-terminal APE_0489 IPR001697 Pyruvate kinase APE_0489 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APE_0489 IPR040442 Pyruvate kinase-like domain superfamily APE_0489 IPR011037 Pyruvate kinase-like, insert domain superfamily APE_0489 IPR018209 Pyruvate kinase, active site APE_0489 IPR015793 Pyruvate kinase, barrel APE_0489 IPR015795 Pyruvate kinase, C-terminal APE_0489 IPR036918 Pyruvate kinase, C-terminal domain superfamily APE_0489 IPR015806 Pyruvate kinase, insert domain superfamily APE_0490.1 IPR029057 Phosphoribosyltransferase-like APE_0490.1 IPR000836 Phosphoribosyltransferase domain APE_0490.1 IPR023747 Xanthine-guanine phosphoribosyltransferase APE_0492.1 IPR029479 Nitroreductase APE_0492.1 IPR000415 Nitroreductase-like APE_0492.1 IPR020051 SagB-type dehydrogenase domain APE_0496.1 IPR024567 Ribonuclease HII/HIII domain APE_0496.1 IPR012337 Ribonuclease H-like superfamily APE_0496.1 IPR036397 Ribonuclease H superfamily APE_0496.1 IPR022898 Ribonuclease HII APE_0496.1 IPR001352 Ribonuclease HII/HIII APE_0506 IPR007581 Endonuclease V APE_0510.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0510.1 IPR006074 GTP1/OBG, conserved site APE_0510.1 IPR031167 OBG-type guanine nucleotide-binding (G) domain APE_0510.1 IPR006169 GTP1/OBG domain APE_0510.1 IPR036726 GTP1/OBG domain superfamily APE_0510.1 IPR006073 GTP binding domain APE_0510.1 IPR035101 GTP-binding protein, Obg-type APE_0510.1 IPR014100 GTP-binding protein Obg/CgtA APE_0511.1 IPR023797 RNA 3'-terminal phosphate cyclase domain APE_0511.1 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain APE_0511.1 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily APE_0511.1 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta APE_0511.1 IPR000228 RNA 3'-terminal phosphate cyclase APE_0511.1 IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site APE_0511.1 IPR017770 RNA 3'-terminal phosphate cyclase type 1 APE_0511.1 IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily APE_0514 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_0514 IPR023267 RNA (C5-cytosine) methyltransferase APE_0514 IPR011023 Nop2p APE_0514 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type APE_0514 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal APE_0514 IPR023545 rRNA small subunit methyltransferase F APE_0514 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain APE_0517 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain APE_0519.1 IPR032837 Glycerol-1-phosphate dehydrogenase APE_0519.1 IPR023003 Glycerol-1-phosphate dehydrogenase, bacteria APE_0521.1 IPR023333 Proteasome B-type subunit APE_0521.1 IPR029055 Nucleophile aminohydrolases, N-terminal APE_0521.1 IPR000243 Peptidase T1A, proteasome beta-subunit APE_0521.1 IPR001353 Proteasome, subunit alpha/beta APE_0521.1 IPR022483 Peptidase T1A, proteasome beta-subunit, actinobacteria APE_0522.1 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain APE_0522.1 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APE_0522.1 IPR001279 Metallo-beta-lactamase APE_0522.1 IPR022712 Beta-Casp domain APE_0525.1 IPR001048 Aspartate/glutamate/uridylate kinase APE_0525.1 IPR036974 PUA domain superfamily APE_0525.1 IPR015947 PUA-like superfamily APE_0525.1 IPR002478 PUA domain APE_0525.1 IPR036393 Acetylglutamate kinase-like superfamily APE_0525.1 IPR019797 Glutamate 5-kinase, conserved site APE_0525.1 IPR041739 Glutamate-5-kinase domain APE_0525.1 IPR001057 Glutamate/acetylglutamate kinase APE_0525.1 IPR011529 Glutamate 5-kinase APE_0525.1 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase APE_0526.1 IPR036005 Creatinase/aminopeptidase-like APE_0526.1 IPR001714 Peptidase M24, methionine aminopeptidase APE_0526.1 IPR000994 Peptidase M24 APE_0526.1 IPR000587 Creatinase, N-terminal APE_0526.1 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APE_0526.1 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site APE_0528 IPR004304 Acetamidase/Formamidase APE_0532.1 IPR017882 Zinc import ATP-binding protein ZnuC APE_0532.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0532.1 IPR017871 ABC transporter, conserved site APE_0532.1 IPR003439 ABC transporter-like APE_0532.1 IPR003593 AAA+ ATPase domain APE_0537.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_0537.1 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APE_0537.1 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase APE_0537.1 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type APE_0545.1 IPR029057 Phosphoribosyltransferase-like APE_0545.1 IPR034332 Uracil phosphoribosyltransferase, bacterial-type APE_0545.1 IPR005765 Uracil phosphoribosyl transferase APE_0545.1 IPR000836 Phosphoribosyltransferase domain APE_0553 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal APE_0553 IPR011530 Ribosomal RNA adenine dimethylase APE_0553 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site APE_0553 IPR023165 rRNA adenine dimethylase-like APE_0553 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APE_0553 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_0555.1 IPR029028 Alpha/beta knot methyltransferases APE_0555.1 IPR004384 RNA methyltransferase TrmJ/LasT APE_0555.1 IPR001537 tRNA/rRNA methyltransferase, SpoU type APE_0555.1 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APE_0557 IPR004114 THUMP domain APE_0557 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_0557 IPR000241 Putative RNA methylase domain APE_0564 IPR000453 Chorismate synthase APE_0564 IPR035904 Chorismate synthase AroC superfamily APE_0564 IPR020541 Chorismate synthase, conserved site APE_0569 IPR036968 Enolpyruvate transferase domain superfamily APE_0569 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase APE_0569 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site APE_0569 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta APE_0569 IPR001986 Enolpyruvate transferase domain APE_0574.1 IPR011342 Shikimate dehydrogenase APE_0574.1 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APE_0574.1 IPR022893 Shikimate dehydrogenase family APE_0574.1 IPR041121 SDH, C-terminal APE_0574.1 IPR036291 NAD(P)-binding domain superfamily APE_0574.1 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal APE_0579 IPR016037 3-dehydroquinate synthase AroB APE_0579 IPR030963 3-dehydroquinate synthase family APE_0579 IPR030960 3-dehydroquinate synthase domain APE_0581.1 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 APE_0581.1 IPR006218 DAHP synthetase I/KDSA APE_0581.1 IPR002701 Chorismate mutase II, prokaryotic-type APE_0581.1 IPR036979 Chorismate mutase domain superfamily APE_0581.1 IPR010954 Chorismate mutase, Firmicutes/Deinococcus APE_0581.1 IPR013785 Aldolase-type TIM barrel APE_0583 IPR029061 Thiamin diphosphate-binding fold APE_0583 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II APE_0583 IPR005475 Transketolase-like, pyrimidine-binding domain APE_0583 IPR033248 Transketolase, C-terminal domain APE_0586.1 IPR029061 Thiamin diphosphate-binding fold APE_0586.1 IPR005474 Transketolase, N-terminal APE_0591.1 IPR014748 Enoyl-CoA hydratase, C-terminal APE_0591.1 IPR001753 Enoyl-CoA hydratase/isomerase APE_0591.1 IPR029045 ClpP/crotonase-like domain superfamily APE_0591.1 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB APE_0595.1 IPR036188 FAD/NAD(P)-binding domain superfamily APE_0595.1 IPR023753 FAD/NAD(P)-binding domain APE_0607 IPR036852 Peptidase S8/S53 domain superfamily APE_0607 IPR023827 Peptidase S8, subtilisin, Asp-active site APE_0607 IPR022398 Peptidase S8, subtilisin, His-active site APE_0607 IPR023828 Peptidase S8, subtilisin, Ser-active site APE_0607 IPR015500 Peptidase S8, subtilisin-related APE_0607 IPR003137 PA domain APE_0607 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily APE_0607 IPR025965 FlgD Ig-like domain APE_0607 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 APE_0607 IPR034213 Vpr-like peptidase, catalytic domain APE_0607 IPR000209 Peptidase S8/S53 domain APE_0621.1 IPR038597 GGGP/HepGP synthase superfamily APE_0621.1 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase APE_0621.1 IPR010946 Geranylgeranylglyceryl phosphate synthase APE_0624.1 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site APE_0624.1 IPR036291 NAD(P)-binding domain superfamily APE_0624.1 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain APE_0624.1 IPR000043 Adenosylhomocysteinase-like APE_0624.1 IPR042172 Adenosylhomocysteinase-like superfamily APE_0632.1 IPR002933 Peptidase M20 APE_0632.1 IPR011650 Peptidase M20, dimerisation domain APE_0632.1 IPR036264 Bacterial exopeptidase dimerisation domain APE_0632.1 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria APE_0632.1 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site APE_0639.1 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic APE_0639.1 IPR017716 S-adenosylmethionine decarboxylase proenzyme APE_0639.1 IPR016067 S-adenosylmethionine decarboxylase, core APE_0641 IPR005746 Thioredoxin APE_0641 IPR036249 Thioredoxin-like superfamily APE_0641 IPR013766 Thioredoxin domain APE_0641 IPR017937 Thioredoxin, conserved site APE_0650.1 IPR000121 PEP-utilising enzyme, C-terminal APE_0650.1 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APE_0650.1 IPR018274 PEP-utilising enzyme, active site APE_0650.1 IPR006319 Phosphoenolpyruvate synthase APE_0650.1 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding APE_0650.1 IPR008279 PEP-utilising enzyme, mobile domain APE_0650.1 IPR013815 ATP-grasp fold, subdomain 1 APE_0650.1 IPR023151 PEP-utilising enzyme, conserved site APE_0650.1 IPR036637 Phosphohistidine domain superfamily APE_0662.1 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain APE_0662.1 IPR004154 Anticodon-binding APE_0662.1 IPR006195 Aminoacyl-tRNA synthetase, class II APE_0662.1 IPR036621 Anticodon-binding domain superfamily APE_0662.1 IPR033656 Histidyl-anticodon-binding APE_0662.1 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit APE_0662.1 IPR015807 Histidine-tRNA ligase APE_0665 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup APE_0665 IPR004788 Ribose 5-phosphate isomerase, type A APE_0665 IPR037171 NagB/RpiA transferase-like APE_0669.1 IPR016084 Haem oxygenase-like, multi-helical APE_0669.1 IPR027574 Thiaminase II APE_0669.1 IPR004305 Thiaminase-2/PQQC APE_0672.1 IPR001557 L-lactate/malate dehydrogenase APE_0672.1 IPR036291 NAD(P)-binding domain superfamily APE_0672.1 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal APE_0672.1 IPR022383 Lactate/malate dehydrogenase, C-terminal APE_0672.1 IPR011275 Malate dehydrogenase, type 3 APE_0672.1 IPR001236 Lactate/malate dehydrogenase, N-terminal APE_0674.1 IPR004839 Aminotransferase, class I/classII APE_0674.1 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APE_0674.1 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site APE_0674.1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_0674.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_0675.1 IPR012340 Nucleic acid-binding, OB-fold APE_0675.1 IPR015413 Methionyl/Leucyl tRNA synthetase APE_0675.1 IPR033911 Methioninyl-tRNA synthetase core domain APE_0675.1 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain APE_0675.1 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding APE_0675.1 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APE_0675.1 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal APE_0675.1 IPR014758 Methionyl-tRNA synthetase APE_0675.1 IPR023457 Methionine-tRNA synthetase, type 2 APE_0675.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_0675.1 IPR002547 tRNA-binding domain APE_0676 IPR003700 Ketopantoate hydroxymethyltransferase APE_0676 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APE_0676 IPR040442 Pyruvate kinase-like domain superfamily APE_0677.1 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APE_0677.1 IPR013752 Ketopantoate reductase, C-terminal domain APE_0677.1 IPR013332 Ketopantoate reductase, N-terminal domain APE_0677.1 IPR036291 NAD(P)-binding domain superfamily APE_0677.1 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APE_0677.1 IPR003710 Ketopantoate reductase ApbA/PanE APE_0686 IPR000649 Initiation factor 2B-related APE_0686 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal APE_0686 IPR011559 Initiation factor 2B alpha/beta/delta APE_0686 IPR037171 NagB/RpiA transferase-like APE_0686 IPR005251 Methylthioribose-1-phosphate isomerase APE_0688 IPR037523 Vicinal oxygen chelate (VOC) domain APE_0688 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APE_0688 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APE_0689.1 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic APE_0689.1 IPR024084 Isopropylmalate dehydrogenase-like domain APE_0689.1 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site APE_0695.1 IPR014155 Type IV secretion system protein VirB11 APE_0695.1 IPR001482 Type II/IV secretion system protein APE_0695.1 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APE_0695.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0708.1 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APE_0708.1 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding APE_0708.1 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily APE_0708.1 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily APE_0712.1 IPR036849 Enolase-like, C-terminal domain superfamily APE_0712.1 IPR029017 Enolase-like, N-terminal APE_0712.1 IPR010197 o-Succinylbenzoate synthase, MenC type 2 APE_0712.1 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APE_0712.1 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APE_0712.1 IPR029065 Enolase C-terminal domain-like APE_0715.1 IPR004772 TrkH potassium transport family APE_0715.1 IPR003445 Cation transporter APE_0739 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APE_0739 IPR006089 Acyl-CoA dehydrogenase, conserved site APE_0739 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APE_0739 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APE_0739 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APE_0739 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APE_0739 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APE_0741 IPR001189 Manganese/iron superoxide dismutase APE_0741 IPR019833 Manganese/iron superoxide dismutase, binding site APE_0741 IPR019832 Manganese/iron superoxide dismutase, C-terminal APE_0741 IPR019831 Manganese/iron superoxide dismutase, N-terminal APE_0741 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily APE_0741 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily APE_0745.1 IPR010624 KaiC domain APE_0745.1 IPR014774 KaiC-like domain APE_0745.1 IPR022475 Uncharacterised protein family UPF0273, KaiC-like APE_0745.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0767.1 IPR001045 Spermidine/spermine synthases APE_0767.1 IPR035246 Spermidine synthase, tetramerisation domain APE_0767.1 IPR030374 Polyamine biosynthesis domain APE_0767.1 IPR030373 Polyamine biosynthesis domain, conserved site APE_0767.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_0767.1 IPR037163 Spermidine synthase, tetramerisation domain superfamily APE_0781.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0781.1 IPR003593 AAA+ ATPase domain APE_0781.1 IPR004948 Nucleoside-triphosphatase, THEP1 type APE_0782.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_0782.1 IPR002905 tRNA methyltransferase, Trm1 APE_0782.1 IPR022923 tRNA (guanine(26)-N(2))-dimethyltransferase, archaeal and bacterial APE_0782.1 IPR042296 tRNA methyltransferase, Trm1, C-terminal APE_0785.1 IPR006668 Magnesium transporter, MgtE intracellular domain APE_0785.1 IPR000644 CBS domain APE_0785.1 IPR006669 Magnesium transporter MgtE APE_0785.1 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily APE_0785.1 IPR006667 SLC41 divalent cation transporters, integral membrane domain APE_0785.1 IPR038048 Magnesium transporter MgtE, transmembrane domain APE_0785.1 IPR038076 MgtE, N-terminal domain superfamily APE_0792.1 IPR002429 Cytochrome c oxidase subunit II-like C-terminal APE_0792.1 IPR008972 Cupredoxin APE_0792.1 IPR014222 Cytochrome c oxidase, subunit II APE_0792.1 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain APE_0792.1 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily APE_0792.1 IPR001505 Copper centre Cu(A) APE_0793.1 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle APE_0793.1 IPR023616 Cytochrome c oxidase-like, subunit I domain APE_0793.1 IPR036927 Cytochrome c oxidase-like, subunit I superfamily APE_0793.1 IPR000298 Cytochrome c oxidase subunit III-like APE_0793.1 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site APE_0793.1 IPR000883 Cytochrome c oxidase subunit I APE_0793.1 IPR014241 Cytochrome c oxidase, subunit I bacterial type APE_0793.1 IPR035973 Cytochrome c oxidase subunit III-like superfamily APE_0801.1 IPR036523 SurE-like phosphatase/nucleotidase superfamily APE_0801.1 IPR002828 Survival protein SurE-like phosphatase/nucleotidase APE_0801.1 IPR030048 Survival protein SurE APE_0805 IPR002104 Integrase, catalytic domain APE_0805 IPR010998 Integrase/recombinase, N-terminal APE_0805 IPR013762 Integrase-like, catalytic domain superfamily APE_0805 IPR011932 Tyrosine recombinase XerD APE_0805 IPR023009 Tyrosine recombinase XerC/XerD APE_0805 IPR011010 DNA breaking-rejoining enzyme, catalytic core APE_0805 IPR004107 Integrase, SAM-like, N-terminal APE_0807.1 IPR016163 Aldehyde dehydrogenase, C-terminal APE_0807.1 IPR029510 Aldehyde dehydrogenase, glutamic acid active site APE_0807.1 IPR016160 Aldehyde dehydrogenase, cysteine active site APE_0807.1 IPR015590 Aldehyde dehydrogenase domain APE_0807.1 IPR016161 Aldehyde/histidinol dehydrogenase APE_0807.1 IPR005932 1-pyrroline-5-carboxylate dehydrogenase APE_0807.1 IPR016162 Aldehyde dehydrogenase, N-terminal APE_0809.1 IPR036621 Anticodon-binding domain superfamily APE_0809.1 IPR004154 Anticodon-binding APE_0809.1 IPR012947 Threonyl/alanyl tRNA synthetase, SAD APE_0809.1 IPR006195 Aminoacyl-tRNA synthetase, class II APE_0809.1 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) APE_0809.1 IPR033728 Threonine-tRNA ligase catalytic core domain APE_0809.1 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily APE_0809.1 IPR002320 Threonine-tRNA ligase, class IIa APE_0815.1 IPR004498 Ribosomal protein L11 methyltransferase APE_0815.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_0872.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_0872.1 IPR018117 DNA methylase, C-5 cytosine-specific, active site APE_0872.1 IPR001525 C-5 cytosine methyltransferase APE_0892.1 IPR008995 Molybdate/tungstate binding, C-terminal APE_0892.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0892.1 IPR017871 ABC transporter, conserved site APE_0892.1 IPR003439 ABC transporter-like APE_0892.1 IPR013611 Transport-associated OB, type 2 APE_0892.1 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC APE_0892.1 IPR003593 AAA+ ATPase domain APE_0903.1 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain APE_0903.1 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria APE_0903.1 IPR003156 DHHA1 domain APE_0903.1 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily APE_0903.1 IPR012947 Threonyl/alanyl tRNA synthetase, SAD APE_0903.1 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily APE_0903.1 IPR002318 Alanine-tRNA ligase, class IIc APE_0903.1 IPR009000 Translation protein, beta-barrel domain superfamily APE_0903.1 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal APE_0907.1 IPR001844 Chaperonin Cpn60 APE_0907.1 IPR002423 Chaperonin Cpn60/TCP-1 family APE_0907.1 IPR027409 GroEL-like apical domain superfamily APE_0907.1 IPR027413 GroEL-like equatorial domain superfamily APE_0907.1 IPR027410 TCP-1-like chaperonin intermediate domain superfamily APE_0912 IPR036291 NAD(P)-binding domain superfamily APE_0912 IPR002347 Short-chain dehydrogenase/reductase SDR APE_0912 IPR020904 Short-chain dehydrogenase/reductase, conserved site APE_0917 IPR028082 Periplasmic binding protein-like I APE_0917 IPR000709 Leu/Ile/Val-binding protein APE_0917 IPR028081 Leucine-binding protein domain APE_0919 IPR003439 ABC transporter-like APE_0919 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0919 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APE_0919 IPR017871 ABC transporter, conserved site APE_0919 IPR003593 AAA+ ATPase domain APE_0921 IPR003593 AAA+ ATPase domain APE_0921 IPR017871 ABC transporter, conserved site APE_0921 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0921 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APE_0921 IPR003439 ABC transporter-like APE_0929.1 IPR016039 Thiolase-like APE_0929.1 IPR002155 Thiolase APE_0929.1 IPR020616 Thiolase, N-terminal APE_0929.1 IPR020610 Thiolase, active site APE_0929.1 IPR020615 Thiolase, acyl-enzyme intermediate active site APE_0929.1 IPR020613 Thiolase, conserved site APE_0929.1 IPR020617 Thiolase, C-terminal APE_0935 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 APE_0935 IPR036188 FAD/NAD(P)-binding domain superfamily APE_0935 IPR023753 FAD/NAD(P)-binding domain APE_0935 IPR009051 Alpha-helical ferredoxin APE_0935 IPR028261 Dihydroprymidine dehydrogenase domain II APE_0941 IPR035906 MetI-like superfamily APE_0941 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_0943 IPR035906 MetI-like superfamily APE_0943 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_0944.1 IPR008995 Molybdate/tungstate binding, C-terminal APE_0944.1 IPR003593 AAA+ ATPase domain APE_0944.1 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA APE_0944.1 IPR013611 Transport-associated OB, type 2 APE_0944.1 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit APE_0944.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0944.1 IPR003439 ABC transporter-like APE_0944.1 IPR017871 ABC transporter, conserved site APE_0945.1 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein APE_0945.1 IPR006059 Bacterial extracellular solute-binding protein APE_0946 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site APE_0946 IPR036010 2Fe-2S ferredoxin-like superfamily APE_0946 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain APE_0946 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APE_0946 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal APE_0946 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APE_0946 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein APE_0946 IPR009051 Alpha-helical ferredoxin APE_0946 IPR012675 Beta-grasp domain superfamily APE_0948.1 IPR039023 Succinate dehydrogenase membrane subunit SdhC, prokaryotes APE_0948.1 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit APE_0948.1 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit APE_0948.1 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit APE_0950.1 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily APE_0950.1 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit APE_0950.1 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APE_0950.1 IPR005884 Fumarate reductase, flavoprotein subunit APE_0950.1 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site APE_0950.1 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily APE_0950.1 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal APE_0950.1 IPR036188 FAD/NAD(P)-binding domain superfamily APE_0951.1 IPR000089 Biotin/lipoyl attachment APE_0951.1 IPR002930 Glycine cleavage system H-protein APE_0951.1 IPR033753 Glycine cleavage system H-protein/Simiate APE_0951.1 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APE_0951.1 IPR011053 Single hybrid motif APE_0951.1 IPR017453 Glycine cleavage system H-protein, subgroup APE_0955 IPR014710 RmlC-like jelly roll fold APE_0955 IPR018488 Cyclic nucleotide-binding, conserved site APE_0955 IPR000595 Cyclic nucleotide-binding domain APE_0955 IPR005821 Ion transport domain APE_0955 IPR018490 Cyclic nucleotide-binding-like APE_0955 IPR028325 Voltage-gated potassium channel APE_0959 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain APE_0959 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding APE_0959 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily APE_0959 IPR018062 HTH domain AraC-type, conserved site APE_0959 IPR036388 Winged helix-like DNA-binding domain superfamily APE_0959 IPR035451 Ada-like domain superfamily APE_0959 IPR016221 Bifunctional regulatory protein Ada APE_0959 IPR018060 DNA binding HTH domain, AraC-type APE_0959 IPR009057 Homeobox-like domain superfamily APE_0959 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain APE_0959 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site APE_0959 IPR004026 Ada DNA repair, metal-binding APE_0960 IPR000642 Peptidase M41 APE_0960 IPR037219 Peptidase M41-like APE_0960 IPR011546 Peptidase M41, FtsH extracellular APE_0960 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0960 IPR003593 AAA+ ATPase domain APE_0960 IPR041569 AAA ATPase, AAA+ lid domain APE_0960 IPR003959 ATPase, AAA-type, core APE_0960 IPR003960 ATPase, AAA-type, conserved site APE_0960 IPR005936 Peptidase, FtsH APE_0966.1 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type APE_0966.1 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA APE_0966.1 IPR029052 Metallo-dependent phosphatase-like APE_0972.1 IPR038377 Sodium/glucose symporter superfamily APE_0972.1 IPR001734 Sodium/solute symporter APE_0972.1 IPR011851 Sodium/proline symporter APE_0974.1 IPR000644 CBS domain APE_0974.1 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type APE_0974.1 IPR035474 KpsF-like, SIS domain APE_0974.1 IPR001347 Sugar isomerase (SIS) APE_0978.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_0978.1 IPR033690 Adenylate kinase, conserved site APE_0978.1 IPR000850 Adenylate kinase/UMP-CMP kinase APE_0979.1 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit APE_0979.1 IPR000120 Amidase APE_0979.1 IPR020556 Amidase, conserved site APE_0979.1 IPR036928 Amidase signature (AS) superfamily APE_0979.1 IPR023631 Amidase signature domain APE_0986.1 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily APE_0986.1 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB APE_0993.1 IPR035994 Nucleoside phosphorylase superfamily APE_0993.1 IPR000845 Nucleoside phosphorylase domain APE_0993.1 IPR018016 Nucleoside phosphorylase, conserved site APE_0993.1 IPR004402 Purine nucleoside phosphorylase DeoD-type APE_0996.1 IPR037035 Glycerate kinase-like, C-terminal domain superfamily APE_0996.1 IPR025286 MOFRL-associated domain APE_0996.1 IPR038614 Glycerate kinase, N-terminal domain superfamily APE_0996.1 IPR007835 MOFRL domain APE_0996.1 IPR039760 MOFRL domain-containing protein APE_1011.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_1011.1 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase APE_1015 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding APE_1015 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APE_1015 IPR002300 Aminoacyl-tRNA synthetase, class Ia APE_1015 IPR002302 Leucine-tRNA ligase APE_1015 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APE_1015 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain APE_1015 IPR025709 Leucyl-tRNA synthetase, editing domain APE_1015 IPR015413 Methionyl/Leucyl tRNA synthetase APE_1015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_1026.1 IPR003439 ABC transporter-like APE_1026.1 IPR017871 ABC transporter, conserved site APE_1026.1 IPR005895 ABC transporter, haem export, CcmA APE_1026.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1026.1 IPR003593 AAA+ ATPase domain APE_1035.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1035.1 IPR011704 ATPase, dynein-related, AAA domain APE_1035.1 IPR003593 AAA+ ATPase domain APE_1035.1 IPR022547 ATPase, RavA, C-terminal APE_1035.1 IPR041538 ATPase RavA-like, AAA lid domain APE_1035.1 IPR023671 ATPase RavA APE_1038.1 IPR016192 APOBEC/CMP deaminase, zinc-binding APE_1038.1 IPR002125 Cytidine and deoxycytidylate deaminase domain APE_1038.1 IPR006262 Cytidine deaminase, homotetrameric APE_1038.1 IPR016193 Cytidine deaminase-like APE_1043.1 IPR023753 FAD/NAD(P)-binding domain APE_1043.1 IPR036188 FAD/NAD(P)-binding domain superfamily APE_1044 IPR000415 Nitroreductase-like APE_1044 IPR029479 Nitroreductase APE_1044 IPR016446 Flavin oxidoreductase Frp family APE_1045.1 IPR022919 Peptidase M48, protease HtpX, putative APE_1045.1 IPR001915 Peptidase M48 APE_1049.1 IPR002491 ABC transporter periplasmic binding domain APE_1049.1 IPR023544 ABC transporter, vitamin B12-binding protein APE_1053.1 IPR000522 ABC transporter, permease protein, BtuC-like APE_1053.1 IPR037294 ABC transporter, BtuC-like APE_1055.1 IPR003439 ABC transporter-like APE_1055.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1055.1 IPR017871 ABC transporter, conserved site APE_1055.1 IPR003593 AAA+ ATPase domain APE_1056.1 IPR023473 AMMECR1 APE_1056.1 IPR027623 AmmeMemoRadiSam system protein A APE_1056.1 IPR023472 Uncharacterised protein family MJ0810 APE_1056.1 IPR027485 AMMECR1, N-terminal APE_1056.1 IPR002733 AMMECR1 domain APE_1056.1 IPR036071 AMMECR1 domain superfamily APE_1061.1 IPR005982 Thioredoxin reductase APE_1061.1 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site APE_1061.1 IPR036188 FAD/NAD(P)-binding domain superfamily APE_1061.1 IPR023753 FAD/NAD(P)-binding domain APE_1065.1 IPR011761 ATP-grasp fold APE_1065.1 IPR005809 Succinate--CoA synthetase, beta subunit APE_1065.1 IPR013815 ATP-grasp fold, subdomain 1 APE_1065.1 IPR005811 ATP-citrate lyase/succinyl-CoA ligase APE_1065.1 IPR016102 Succinyl-CoA synthetase-like APE_1065.1 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type APE_1065.1 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site APE_1072.1 IPR005810 Succinyl-CoA ligase, alpha subunit APE_1072.1 IPR036291 NAD(P)-binding domain superfamily APE_1072.1 IPR016102 Succinyl-CoA synthetase-like APE_1072.1 IPR005811 ATP-citrate lyase/succinyl-CoA ligase APE_1072.1 IPR003781 CoA-binding APE_1072.1 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site APE_1072.1 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site APE_1073 IPR006935 Helicase/UvrB, N-terminal APE_1073 IPR014001 Helicase superfamily 1/2, ATP-binding domain APE_1073 IPR001650 Helicase, C-terminal APE_1073 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1073 IPR011332 Zinc-binding ribosomal protein APE_1081.1 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain APE_1081.1 IPR003593 AAA+ ATPase domain APE_1081.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1081.1 IPR013822 Signal recognition particle SRP54, helical bundle APE_1081.1 IPR004390 Signal-recognition particle receptor FtsY APE_1081.1 IPR036225 SRP/SRP receptor, N-terminal APE_1081.1 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily APE_1094.1 IPR016059 DNA ligase, ATP-dependent, conserved site APE_1094.1 IPR012309 DNA ligase, ATP-dependent, C-terminal APE_1094.1 IPR012340 Nucleic acid-binding, OB-fold APE_1094.1 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily APE_1094.1 IPR012310 DNA ligase, ATP-dependent, central APE_1094.1 IPR012308 DNA ligase, ATP-dependent, N-terminal APE_1094.1 IPR022865 DNA ligase, ATP-dependent, bacterial/archaeal APE_1094.1 IPR000977 DNA ligase, ATP-dependent APE_1098 IPR023267 RNA (C5-cytosine) methyltransferase APE_1098 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site APE_1098 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type APE_1098 IPR035926 NusB-like superfamily APE_1098 IPR006027 NusB/RsmB/TIM44 APE_1098 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_1098 IPR004573 rRNA small subunit methyltransferase B APE_1104.1 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal APE_1104.1 IPR002504 NAD kinase APE_1104.1 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily APE_1104.1 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal APE_1106.1 IPR010280 (Uracil-5)-methyltransferase family APE_1106.1 IPR002792 TRAM domain APE_1106.1 IPR012340 Nucleic acid-binding, OB-fold APE_1106.1 IPR030390 RNA methyltransferase TrmA, active site APE_1106.1 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD APE_1106.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_1109.1 IPR036076 Fructose-1,6-bisphosphatase, class V superfamily APE_1109.1 IPR002803 Fructose-1,6-bisphosphatase, class V APE_1117 IPR022877 Protein of unknown funcion UPF0173 APE_1117 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APE_1117 IPR001279 Metallo-beta-lactamase APE_1119.1 IPR003593 AAA+ ATPase domain APE_1119.1 IPR003439 ABC transporter-like APE_1119.1 IPR017871 ABC transporter, conserved site APE_1119.1 IPR015861 ABC transporter, ribose import, RbsA APE_1119.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1129 IPR015413 Methionyl/Leucyl tRNA synthetase APE_1129 IPR014758 Methionyl-tRNA synthetase APE_1129 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APE_1129 IPR023458 Methionine-tRNA ligase, type 1 APE_1129 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding APE_1129 IPR033911 Methioninyl-tRNA synthetase core domain APE_1129 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APE_1129 IPR029038 Methionyl-tRNA synthetase, Zn-domain APE_1129 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain APE_1129 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_1135 IPR000905 Gcp-like domain APE_1135 IPR017861 Kae1/TsaD family APE_1135 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD APE_1136.1 IPR008271 Serine/threonine-protein kinase, active site APE_1136.1 IPR011009 Protein kinase-like domain superfamily APE_1136.1 IPR005543 PASTA domain APE_1136.1 IPR000719 Protein kinase domain APE_1136.1 IPR017441 Protein kinase, ATP binding site APE_1138.1 IPR002637 Ham1-like protein APE_1138.1 IPR029001 Inosine triphosphate pyrophosphatase-like APE_1138.1 IPR020922 dITP/XTP pyrophosphatase APE_1139 IPR000589 Ribosomal protein S15 APE_1139 IPR005290 Ribosomal protein S15, bacterial-type APE_1139 IPR009068 S15/NS1, RNA-binding APE_1140.1 IPR018042 Aspartate kinase, conserved site APE_1140.1 IPR001341 Aspartate kinase APE_1140.1 IPR005260 Aspartate kinase, monofunctional class APE_1140.1 IPR001048 Aspartate/glutamate/uridylate kinase APE_1140.1 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain APE_1140.1 IPR002912 ACT domain APE_1140.1 IPR036393 Acetylglutamate kinase-like superfamily APE_1143 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site APE_1143 IPR005676 Aspartate-semialdehyde dehydrogenase, peptidoglycan lacking APE_1143 IPR036291 NAD(P)-binding domain superfamily APE_1143 IPR000534 Semialdehyde dehydrogenase, NAD-binding APE_1143 IPR012280 Semialdehyde dehydrogenase, dimerisation domain APE_1143 IPR012080 Aspartate-semialdehyde dehydrogenase APE_1144.1 IPR001342 Homoserine dehydrogenase, catalytic APE_1144.1 IPR036291 NAD(P)-binding domain superfamily APE_1144.1 IPR019811 Homoserine dehydrogenase, conserved site APE_1144.1 IPR016204 Homoserine dehydrogenase APE_1144.1 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding APE_1144.1 IPR002912 ACT domain APE_1156.1 IPR036873 Rhodanese-like domain superfamily APE_1156.1 IPR001763 Rhodanese-like domain APE_1156.1 IPR003720 tRNA sulfurtransferase ThiI APE_1156.1 IPR026340 Thiazole biosynthesis domain APE_1156.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_1156.1 IPR020536 Thil, AANH domain APE_1156.1 IPR004114 THUMP domain APE_1158.1 IPR002792 TRAM domain APE_1158.1 IPR006638 Elp3/MiaB/NifB APE_1158.1 IPR023404 Radical SAM, alpha/beta horseshoe APE_1158.1 IPR007197 Radical SAM APE_1158.1 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB APE_1158.1 IPR038135 Methylthiotransferase, N-terminal domain superfamily APE_1158.1 IPR013848 Methylthiotransferase, N-terminal APE_1158.1 IPR020612 Methylthiotransferase, conserved site APE_1158.1 IPR005839 Methylthiotransferase APE_1164 IPR012675 Beta-grasp domain superfamily APE_1164 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 APE_1164 IPR012676 TGS-like APE_1164 IPR031167 OBG-type guanine nucleotide-binding (G) domain APE_1164 IPR041706 YchF, N-terminal APE_1164 IPR004095 TGS APE_1164 IPR006073 GTP binding domain APE_1164 IPR013029 YchF, C-terminal domain APE_1164 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1164 IPR023192 TGS-like domain superfamily APE_1178 IPR014710 RmlC-like jelly roll fold APE_1178 IPR011051 RmlC-like cupin domain superfamily APE_1178 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related APE_1179.1 IPR036291 NAD(P)-binding domain superfamily APE_1179.1 IPR005913 dTDP-4-dehydrorhamnose reductase family APE_1179.1 IPR029903 RmlD-like substrate binding domain APE_1180 IPR036291 NAD(P)-binding domain superfamily APE_1180 IPR005888 dTDP-glucose 4,6-dehydratase APE_1180 IPR016040 NAD(P)-binding domain APE_1181 IPR005835 Nucleotidyl transferase domain APE_1181 IPR005908 Glucose-1-phosphate thymidylyltransferase, long form APE_1181 IPR029044 Nucleotide-diphospho-sugar transferases APE_1183 IPR004033 UbiE/COQ5 methyltransferase APE_1183 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_1183 IPR023576 UbiE/COQ5 methyltransferase, conserved site APE_1189.1 IPR029044 Nucleotide-diphospho-sugar transferases APE_1189.1 IPR001173 Glycosyltransferase 2-like APE_1191 IPR001296 Glycosyl transferase, family 1 APE_1191 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APE_1191 IPR017814 Mycothiol biosynthesis protein, MshA APE_1195.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1195.1 IPR002891 Adenylyl-sulfate kinase APE_1197.1 IPR025980 ATP-sulfurylase PUA-like domain APE_1197.1 IPR002650 Sulphate adenylyltransferase APE_1197.1 IPR024951 Sulphate adenylyltransferase catalytic domain APE_1197.1 IPR015947 PUA-like superfamily APE_1197.1 IPR020792 Sulphate adenylyltransferase, prokaryotic-type APE_1197.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_1202.1 IPR029044 Nucleotide-diphospho-sugar transferases APE_1202.1 IPR005908 Glucose-1-phosphate thymidylyltransferase, long form APE_1202.1 IPR005835 Nucleotidyl transferase domain APE_1205.1 IPR017932 Glutamine amidotransferase type 2 domain APE_1205.1 IPR035490 GlmS/FrlB, SIS domain 2 APE_1205.1 IPR029055 Nucleophile aminohydrolases, N-terminal APE_1205.1 IPR001347 Sugar isomerase (SIS) APE_1205.1 IPR035466 GlmS/AgaS, SIS domain 1 APE_1205.1 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising APE_1208.1 IPR029044 Nucleotide-diphospho-sugar transferases APE_1208.1 IPR005835 Nucleotidyl transferase domain APE_1208.1 IPR005908 Glucose-1-phosphate thymidylyltransferase, long form APE_1209f IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APE_1209f IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APE_1209f IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APE_1209f IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APE_1209f IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APE_1209f IPR006089 Acyl-CoA dehydrogenase, conserved site APE_1209f IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APE_1223.1 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APE_1223.1 IPR001926 Pyridoxal-phosphate dependent enzyme APE_1223.1 IPR005857 Cystathionine beta-synthase APE_1223.1 IPR000644 CBS domain APE_1226 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APE_1226 IPR015424 Pyridoxal phosphate-dependent transferase APE_1226 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme APE_1226 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_1232 IPR041372 Cas3, C-terminal APE_1232 IPR006483 CRISPR-associated Cas3-type HD domain APE_1232 IPR038257 CRISPR-associated Cas3-type HD domain superfamily APE_1232 IPR014001 Helicase superfamily 1/2, ATP-binding domain APE_1232 IPR006474 Helicase Cas3, CRISPR-associated, core APE_1232 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1232 IPR035011 CRISPR-associated endonuclease/helicase Cas3 APE_1245.1 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site APE_1245.1 IPR036291 NAD(P)-binding domain superfamily APE_1245.1 IPR020843 Polyketide synthase, enoylreductase domain APE_1245.1 IPR013149 Alcohol dehydrogenase, C-terminal APE_1245.1 IPR013154 Alcohol dehydrogenase, N-terminal APE_1245.1 IPR011032 GroES-like superfamily APE_1245.1 IPR004627 L-threonine 3-dehydrogenase APE_1253 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1253 IPR017871 ABC transporter, conserved site APE_1253 IPR003439 ABC transporter-like APE_1253 IPR003593 AAA+ ATPase domain APE_1255.1 IPR017871 ABC transporter, conserved site APE_1255.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1255.1 IPR003593 AAA+ ATPase domain APE_1255.1 IPR003439 ABC transporter-like APE_1260 IPR001279 Metallo-beta-lactamase APE_1260 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APE_1265.1 IPR002912 ACT domain APE_1265.1 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APE_1265.1 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APE_1265.1 IPR029009 Allosteric substrate binding domain superfamily APE_1265.1 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APE_1265.1 IPR036291 NAD(P)-binding domain superfamily APE_1265.1 IPR006236 D-3-phosphoglycerate dehydrogenase APE_1265.1 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APE_1275 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_1275 IPR013440 Tryptophanase APE_1275 IPR018176 Tryptophanase, conserved site APE_1275 IPR011166 Beta-eliminating lyase family APE_1275 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase APE_1275 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APE_1275 IPR015424 Pyridoxal phosphate-dependent transferase APE_1281 IPR006674 HD domain APE_1281 IPR003607 HD/PDEase domain APE_1285.1 IPR037138 Histone deacetylase domain superfamily APE_1285.1 IPR023696 Ureohydrolase domain superfamily APE_1285.1 IPR023801 Histone deacetylase domain APE_1285.1 IPR000286 Histone deacetylase family APE_1285.1 IPR003085 Acetoin utilization protein AcuC APE_1288.1 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site APE_1288.1 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site APE_1288.1 IPR037943 Nitrate reductase alpha subunit-like, MopB domain APE_1288.1 IPR006656 Molybdopterin oxidoreductase APE_1288.1 IPR028189 Nitrate reductase, alpha subunit, N-terminal APE_1288.1 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain APE_1288.1 IPR006657 Molybdopterin dinucleotide-binding domain APE_1288.1 IPR009010 Aspartate decarboxylase-like domain superfamily APE_1288.1 IPR006468 Nitrate reductase, alpha subunit APE_1294.1 IPR029263 Respiratory nitrate reductase beta, C-terminal APE_1294.1 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APE_1294.1 IPR006547 Nitrate reductase, beta subunit APE_1294.1 IPR038262 Nitrate reductase beta, C-terminal domain superfamily APE_1300.1 IPR042291 Nitrate reductase chaperone, NarJ, domain 2 APE_1300.1 IPR042290 Nitrate reductase chaperone, NarJ, domain 1 APE_1300.1 IPR036411 TorD-like superfamily APE_1300.1 IPR020945 DMSO/Nitrate reductase chaperone APE_1300.1 IPR003765 Nitrate reductase chaperone, NarJ APE_1301.1 IPR003593 AAA+ ATPase domain APE_1301.1 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APE_1301.1 IPR003439 ABC transporter-like APE_1301.1 IPR017871 ABC transporter, conserved site APE_1301.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1304.1 IPR001851 ABC transporter, permease APE_1304.1 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal APE_1307 IPR020845 AMP-binding, conserved site APE_1307 IPR000873 AMP-dependent synthetase/ligase APE_1307 IPR042099 AMP-dependent synthetase-like superfamily APE_1308 IPR003439 ABC transporter-like APE_1308 IPR003593 AAA+ ATPase domain APE_1308 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APE_1308 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1308 IPR017871 ABC transporter, conserved site APE_1310 IPR020845 AMP-binding, conserved site APE_1310 IPR000873 AMP-dependent synthetase/ligase APE_1310 IPR042099 AMP-dependent synthetase-like superfamily APE_1310 IPR025110 AMP-binding enzyme, C-terminal domain APE_1317 IPR011703 ATPase, AAA-3 APE_1317 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1317 IPR041628 ChlI/MoxR, AAA lid domain APE_1328.1 IPR008040 Hydantoinaseoxoprolinase, N-terminal APE_1328.1 IPR002821 Hydantoinase A/oxoprolinase APE_1333 IPR023953 Heme oxygenase IsdG APE_1333 IPR007138 Antibiotic biosynthesis monooxygenase domain APE_1333 IPR011008 Dimeric alpha-beta barrel APE_1335.1 IPR023367 Peptidase M42, domain 2 APE_1335.1 IPR008007 Peptidase M42 APE_1336.1 IPR036188 FAD/NAD(P)-binding domain superfamily APE_1340.1 IPR013497 DNA topoisomerase, type IA, central APE_1340.1 IPR040569 Reverse gyrase, zinc finger APE_1340.1 IPR006171 TOPRIM domain APE_1340.1 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APE_1340.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1340.1 IPR001650 Helicase, C-terminal APE_1340.1 IPR014001 Helicase superfamily 1/2, ATP-binding domain APE_1340.1 IPR005736 Reverse gyrase APE_1340.1 IPR003601 DNA topoisomerase, type IA, domain 2 APE_1340.1 IPR003593 AAA+ ATPase domain APE_1340.1 IPR011545 DEAD/DEAH box helicase domain APE_1340.1 IPR023405 DNA topoisomerase, type IA, core domain APE_1340.1 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 APE_1340.1 IPR003602 DNA topoisomerase, type IA, DNA-binding domain APE_1346.1 IPR020845 AMP-binding, conserved site APE_1346.1 IPR000873 AMP-dependent synthetase/ligase APE_1346.1 IPR025110 AMP-binding enzyme, C-terminal domain APE_1346.1 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain APE_1346.1 IPR011904 Acetate-CoA ligase APE_1346.1 IPR042099 AMP-dependent synthetase-like superfamily APE_1350.1 IPR023045 Molybdenum cofactor biosynthesis C APE_1350.1 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily APE_1350.1 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain APE_1353.1 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial APE_1353.1 IPR004589 DNA helicase, ATP-dependent, RecQ type APE_1353.1 IPR011545 DEAD/DEAH box helicase domain APE_1353.1 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain APE_1353.1 IPR001650 Helicase, C-terminal APE_1353.1 IPR014001 Helicase superfamily 1/2, ATP-binding domain APE_1353.1 IPR018982 RQC domain APE_1353.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1353.1 IPR002121 HRDC domain APE_1353.1 IPR010997 HRDC-like superfamily APE_1353.1 IPR036388 Winged helix-like DNA-binding domain superfamily APE_1366.1 IPR002180 Lumazine/riboflavin synthase APE_1366.1 IPR034964 Lumazine synthase APE_1366.1 IPR036467 Lumazine/riboflavin synthase superfamily APE_1367 IPR005936 Peptidase, FtsH APE_1367 IPR037219 Peptidase M41-like APE_1367 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1367 IPR000642 Peptidase M41 APE_1367 IPR011546 Peptidase M41, FtsH extracellular APE_1367 IPR003960 ATPase, AAA-type, conserved site APE_1367 IPR003959 ATPase, AAA-type, core APE_1367 IPR003593 AAA+ ATPase domain APE_1367 IPR041569 AAA ATPase, AAA+ lid domain APE_1376.1 IPR003593 AAA+ ATPase domain APE_1376.1 IPR040569 Reverse gyrase, zinc finger APE_1376.1 IPR034142 Reverse gyrase, TOPRIM domain APE_1376.1 IPR011545 DEAD/DEAH box helicase domain APE_1376.1 IPR014001 Helicase superfamily 1/2, ATP-binding domain APE_1376.1 IPR006171 TOPRIM domain APE_1376.1 IPR013497 DNA topoisomerase, type IA, central APE_1376.1 IPR003602 DNA topoisomerase, type IA, DNA-binding domain APE_1376.1 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APE_1376.1 IPR001650 Helicase, C-terminal APE_1376.1 IPR023405 DNA topoisomerase, type IA, core domain APE_1376.1 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 APE_1376.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1376.1 IPR005736 Reverse gyrase APE_1376.1 IPR003601 DNA topoisomerase, type IA, domain 2 APE_1380.1 IPR003439 ABC transporter-like APE_1380.1 IPR017871 ABC transporter, conserved site APE_1380.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1380.1 IPR003593 AAA+ ATPase domain APE_1385 IPR036424 Decaprenyl diphosphate synthase-like superfamily APE_1385 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site APE_1385 IPR001441 Decaprenyl diphosphate synthase-like APE_1386.1 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain APE_1386.1 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal APE_1386.1 IPR033524 Leu/Phe/Val dehydrogenases active site APE_1386.1 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase APE_1386.1 IPR036291 NAD(P)-binding domain superfamily APE_1386.1 IPR033922 NAD(P) binding domain of glutamate dehydrogenase APE_1386.1 IPR014362 Glutamate dehydrogenase APE_1390.1 IPR000914 Solute-binding protein family 5 domain APE_1390.1 IPR023765 Solute-binding protein family 5, conserved site APE_1390.1 IPR039424 Solute-binding protein family 5 APE_1390.1 IPR030678 Peptide/nickel binding protein, MppA-type APE_1395.1 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_1395.1 IPR035906 MetI-like superfamily APE_1396 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_1396 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APE_1396 IPR035906 MetI-like superfamily APE_1399 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1399 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APE_1399 IPR003593 AAA+ ATPase domain APE_1399 IPR017871 ABC transporter, conserved site APE_1399 IPR003439 ABC transporter-like APE_1402.1 IPR003593 AAA+ ATPase domain APE_1402.1 IPR003439 ABC transporter-like APE_1402.1 IPR017871 ABC transporter, conserved site APE_1402.1 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APE_1402.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1404.1 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase APE_1404.1 IPR036968 Enolpyruvate transferase domain superfamily APE_1404.1 IPR001986 Enolpyruvate transferase domain APE_1404.1 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site APE_1404.1 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta APE_1410.1 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit APE_1410.1 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 APE_1411.1 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup APE_1411.1 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit APE_1411.1 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal APE_1411.1 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 APE_1415 IPR010227 NADH-quinone oxidoreductase, chain M/4 APE_1415 IPR003918 NADH:ubiquinone oxidoreductase APE_1415 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit APE_1421.1 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site APE_1421.1 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H APE_1422 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H APE_1422 IPR029014 [NiFe]-hydrogenase, large subunit APE_1422 IPR001135 NADH-quinone oxidoreductase, subunit D APE_1422 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily APE_1426 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site APE_1426 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily APE_1426 IPR010218 NADH dehydrogenase, subunit C APE_1426 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit APE_1428.1 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit APE_1428.1 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit APE_1432 IPR005517 Translation elongation factor EFG/EF2, domain IV APE_1432 IPR004540 Translation elongation factor EFG/EF2 APE_1432 IPR000795 Transcription factor, GTP-binding domain APE_1432 IPR005225 Small GTP-binding protein domain APE_1432 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_1432 IPR020568 Ribosomal protein S5 domain 2-type fold APE_1432 IPR009000 Translation protein, beta-barrel domain superfamily APE_1432 IPR031157 Tr-type G domain, conserved site APE_1432 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1432 IPR041095 Elongation Factor G, domain II APE_1432 IPR009022 Elongation factor G, domain III APE_1432 IPR004161 Translation elongation factor EFTu-like, domain 2 APE_1432 IPR035649 EFG, domain V APE_1432 IPR000640 Elongation factor EFG, domain V-like APE_1432 IPR035647 EF-G domain III/V-like APE_1436.1 IPR038331 DisA, linker domain superfamily APE_1436.1 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily APE_1436.1 IPR018906 DNA integrity scanning, DisA, linker region APE_1436.1 IPR003390 DNA integrity scanning protein, DisA, N-terminal APE_1436.1 IPR023763 DNA integrity scanning protein, DisA APE_1436.1 IPR010994 RuvA domain 2-like APE_1445 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain APE_1445 IPR036345 Exoribonuclease, PH domain 2 superfamily APE_1445 IPR004088 K Homology domain, type 1 APE_1445 IPR036612 K Homology domain, type 1 superfamily APE_1445 IPR027408 PNPase/RNase PH domain superfamily APE_1445 IPR003029 S1 domain APE_1445 IPR022967 RNA-binding domain, S1 APE_1445 IPR020568 Ribosomal protein S5 domain 2-type fold APE_1445 IPR015847 Exoribonuclease, phosphorolytic domain 2 APE_1445 IPR012340 Nucleic acid-binding, OB-fold APE_1445 IPR012162 Polyribonucleotide nucleotidyltransferase APE_1445 IPR004087 K Homology domain APE_1445 IPR001247 Exoribonuclease, phosphorolytic domain 1 APE_1447 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily APE_1447 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain APE_1447 IPR027408 PNPase/RNase PH domain superfamily APE_1447 IPR012162 Polyribonucleotide nucleotidyltransferase APE_1447 IPR036612 K Homology domain, type 1 superfamily APE_1447 IPR004088 K Homology domain, type 1 APE_1447 IPR004087 K Homology domain APE_1447 IPR036345 Exoribonuclease, PH domain 2 superfamily APE_1447 IPR015847 Exoribonuclease, phosphorolytic domain 2 APE_1447 IPR001247 Exoribonuclease, phosphorolytic domain 1 APE_1447 IPR020568 Ribosomal protein S5 domain 2-type fold APE_1447 IPR012340 Nucleic acid-binding, OB-fold APE_1447 IPR003029 S1 domain APE_1447 IPR022967 RNA-binding domain, S1 APE_1454.1 IPR036412 HAD-like superfamily APE_1454.1 IPR023214 HAD superfamily APE_1454.1 IPR017969 Heavy-metal-associated, conserved site APE_1454.1 IPR018303 P-type ATPase, phosphorylation site APE_1454.1 IPR006122 Heavy metal-associated domain, copper ion-binding APE_1454.1 IPR006121 Heavy metal-associated domain, HMA APE_1454.1 IPR008250 P-type ATPase, A domain superfamily APE_1454.1 IPR027256 P-type ATPase, subfamily IB APE_1454.1 IPR001757 P-type ATPase APE_1454.1 IPR023299 P-type ATPase, cytoplasmic domain N APE_1454.1 IPR036163 Heavy metal-associated domain superfamily APE_1454.1 IPR023298 P-type ATPase, transmembrane domain superfamily APE_1458 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site APE_1458 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APE_1458 IPR023753 FAD/NAD(P)-binding domain APE_1458 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I APE_1458 IPR006258 Dihydrolipoamide dehydrogenase APE_1458 IPR036188 FAD/NAD(P)-binding domain superfamily APE_1458 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily APE_1461.1 IPR036393 Acetylglutamate kinase-like superfamily APE_1461.1 IPR001057 Glutamate/acetylglutamate kinase APE_1461.1 IPR037529 [LysW]-aminoadipate/[LysW]-glutamate kinase APE_1461.1 IPR004662 Acetylglutamate kinase family APE_1461.1 IPR001048 Aspartate/glutamate/uridylate kinase APE_1462 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 APE_1462 IPR012280 Semialdehyde dehydrogenase, dimerisation domain APE_1462 IPR000534 Semialdehyde dehydrogenase, NAD-binding APE_1462 IPR036291 NAD(P)-binding domain superfamily APE_1462 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site APE_1462 IPR037535 [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate reductase APE_1463 IPR011761 ATP-grasp fold APE_1463 IPR013651 ATP-grasp fold, RimK-type APE_1463 IPR013815 ATP-grasp fold, subdomain 1 APE_1463 IPR011870 Lysine biosynthesis enzyme LysX APE_1463 IPR016185 Pre-ATP-grasp domain superfamily APE_1463 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX APE_1464 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APE_1464 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_1464 IPR037537 [LysW]-aminoadipate semialdehyde/glutamate semialdehyde transaminase APE_1464 IPR005814 Aminotransferase class-III APE_1464 IPR015424 Pyridoxal phosphate-dependent transferase APE_1464 IPR004636 Acetylornithine/Succinylornithine transaminase family APE_1467.1 IPR002933 Peptidase M20 APE_1467.1 IPR010175 [LysW]-lysine/[LysW]-ornithine hydrolase APE_1470.1 IPR018317 Queuosine biosynthesis protein QueC APE_1470.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_1471.1 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 APE_1471.1 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF APE_1472 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding APE_1472 IPR029061 Thiamin diphosphate-binding fold APE_1473.1 IPR029061 Thiamin diphosphate-binding fold APE_1473.1 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain APE_1473.1 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II APE_1473.1 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit APE_1473.1 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II APE_1473.1 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain APE_1473.1 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal APE_1481.1 IPR000086 NUDIX hydrolase domain APE_1481.1 IPR020084 NUDIX hydrolase, conserved site APE_1481.1 IPR015797 NUDIX hydrolase-like domain superfamily APE_1481.1 IPR020476 NUDIX hydrolase APE_1481.1 IPR020605 Octanoyltransferase, conserved site APE_1481.1 IPR000544 Octanoyltransferase APE_1481.1 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain APE_1484.1 IPR029045 ClpP/crotonase-like domain superfamily APE_1484.1 IPR014748 Enoyl-CoA hydratase, C-terminal APE_1484.1 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site APE_1484.1 IPR001753 Enoyl-CoA hydratase/isomerase APE_1488.1 IPR004450 Threonine synthase-like APE_1488.1 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site APE_1488.1 IPR001926 Pyridoxal-phosphate dependent enzyme APE_1488.1 IPR026260 Threonine synthase, bacterial/archaeal APE_1488.1 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APE_1491.1 IPR014777 Tetrapyrrole methylase, subdomain 1 APE_1491.1 IPR019478 Sirohaem synthase, dimerisation domain APE_1491.1 IPR006367 Sirohaem synthase, N-terminal APE_1491.1 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site APE_1491.1 IPR014776 Tetrapyrrole methylase, subdomain 2 APE_1491.1 IPR006366 Uroporphyrin-III C-methyltransferase APE_1491.1 IPR028281 Siroheme synthase, central domain APE_1491.1 IPR036291 NAD(P)-binding domain superfamily APE_1491.1 IPR012409 Sirohaem synthase APE_1491.1 IPR037115 Sirohaem synthase, dimerisation domain superfamily APE_1491.1 IPR035996 Tetrapyrrole methylase superfamily APE_1491.1 IPR000878 Tetrapyrrole methylase APE_1495.1 IPR036812 NADP-dependent oxidoreductase domain superfamily APE_1495.1 IPR023210 NADP-dependent oxidoreductase domain APE_1495a IPR022988 Nickel-responsive transcriptional regulator NikR APE_1495a IPR013321 Arc-type ribbon-helix-helix APE_1495a IPR010985 Ribbon-helix-helix APE_1495a IPR014864 Transcription factor, NikR, nickel binding C-terminal APE_1495a IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal APE_1495a IPR002145 Ribbon-helix-helix protein, CopG APE_1498.1 IPR002912 ACT domain APE_1498.1 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site APE_1498.1 IPR005789 Threonine dehydratase, catabolic APE_1498.1 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APE_1498.1 IPR001926 Pyridoxal-phosphate dependent enzyme APE_1501.1 IPR006056 RidA family APE_1501.1 IPR006175 YjgF/YER057c/UK114 family APE_1501.1 IPR035959 RutC-like superfamily APE_1501.1 IPR019897 RidA, conserved site APE_1505.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1505.1 IPR014774 KaiC-like domain APE_1505.1 IPR022475 Uncharacterised protein family UPF0273, KaiC-like APE_1505.1 IPR010624 KaiC domain APE_1507.1 IPR001093 IMP dehydrogenase/GMP reductase APE_1507.1 IPR013785 Aldolase-type TIM barrel APE_1507.1 IPR015875 IMP dehydrogenase / GMP reductase, conserved site APE_1507.1 IPR005990 Inosine-5'-monophosphate dehydrogenase APE_1507.1 IPR000644 CBS domain APE_1516.1 IPR000462 CDP-alcohol phosphatidyltransferase APE_1516.1 IPR005835 Nucleotidyl transferase domain APE_1516.1 IPR029044 Nucleotide-diphospho-sugar transferases APE_1520.1 IPR001602 Uncharacterised protein family UPF0047 APE_1520.1 IPR035917 YjbQ-like superfamily APE_1522.1 IPR036388 Winged helix-like DNA-binding domain superfamily APE_1522.1 IPR003593 AAA+ ATPase domain APE_1522.1 IPR041445 RuvB, AAA lid domain APE_1522.1 IPR004605 DNA helicase, Holliday junction RuvB-type APE_1522.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1522.1 IPR008824 RuvB-like P-loop domain APE_1522.1 IPR008823 RuvB C-terminal winged helix domain APE_1522.1 IPR036390 Winged helix DNA-binding domain superfamily APE_1524.1 IPR003959 ATPase, AAA-type, core APE_1524.1 IPR003593 AAA+ ATPase domain APE_1524.1 IPR004815 Lon protease, bacterial/eukaryotic-type APE_1524.1 IPR008269 Peptidase S16, Lon proteolytic domain APE_1524.1 IPR027065 Lon protease APE_1524.1 IPR003111 Lon, substrate-binding domain APE_1524.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1524.1 IPR008268 Peptidase S16, active site APE_1524.1 IPR015947 PUA-like superfamily APE_1524.1 IPR020568 Ribosomal protein S5 domain 2-type fold APE_1524.1 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_1530.1 IPR005839 Methylthiotransferase APE_1530.1 IPR006638 Elp3/MiaB/NifB APE_1530.1 IPR023404 Radical SAM, alpha/beta horseshoe APE_1530.1 IPR007197 Radical SAM APE_1530.1 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site APE_1530.1 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB APE_1530.1 IPR038135 Methylthiotransferase, N-terminal domain superfamily APE_1530.1 IPR013848 Methylthiotransferase, N-terminal APE_1530.1 IPR020612 Methylthiotransferase, conserved site APE_1530.1 IPR002792 TRAM domain APE_1538.1 IPR033983 Thiazole synthase ThiG APE_1538.1 IPR013785 Aldolase-type TIM barrel APE_1538.1 IPR008867 Thiazole synthase APE_1543 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA APE_1543 IPR016181 Acyl-CoA N-acyltransferase APE_1543 IPR007807 Helicase domain APE_1543 IPR000182 GNAT domain APE_1543 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain APE_1543 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal APE_1543 IPR038321 TmcA, C-terminal domain superfamily APE_1543 IPR032672 TmcA/NAT10/Kre33 APE_1543 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1547.1 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily APE_1547.1 IPR029058 Alpha/Beta hydrolase fold APE_1547.1 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain APE_1547.1 IPR002469 Dipeptidylpeptidase IV, N-terminal domain APE_1548.1 IPR003593 AAA+ ATPase domain APE_1548.1 IPR005978 Nodulation ABC transporter, NodI APE_1548.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1548.1 IPR017871 ABC transporter, conserved site APE_1548.1 IPR003439 ABC transporter-like APE_1548.1 IPR015851 ABC transporter, NodI APE_1552 IPR001807 Chloride channel, voltage gated APE_1552 IPR014743 Chloride channel, core APE_1552 IPR023861 Chloride channel, ClcA APE_1555.1 IPR001807 Chloride channel, voltage gated APE_1555.1 IPR014743 Chloride channel, core APE_1557.1 IPR013154 Alcohol dehydrogenase, N-terminal APE_1557.1 IPR036291 NAD(P)-binding domain superfamily APE_1557.1 IPR011032 GroES-like superfamily APE_1557.1 IPR013149 Alcohol dehydrogenase, C-terminal APE_1564.1 IPR014856 PIN-domain ribonuclease APE_1571.1 IPR002830 UbiD decarboxylyase family APE_1571.1 IPR023677 UbiD decarboxylyase, bacteria APE_1576 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APE_1576 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1576 IPR003593 AAA+ ATPase domain APE_1576 IPR003439 ABC transporter-like APE_1576 IPR017871 ABC transporter, conserved site APE_1578 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1578 IPR003593 AAA+ ATPase domain APE_1578 IPR003439 ABC transporter-like APE_1578 IPR017871 ABC transporter, conserved site APE_1578 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APE_1581.1 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_1581.1 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APE_1581.1 IPR035906 MetI-like superfamily APE_1582 IPR035906 MetI-like superfamily APE_1582 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_1586 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APE_1586 IPR005859 Cysteine synthase CysK APE_1586 IPR005856 Cysteine synthase APE_1586 IPR001926 Pyridoxal-phosphate dependent enzyme APE_1586 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site APE_1586a IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APE_1586a IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APE_1586a IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APE_1586a IPR006089 Acyl-CoA dehydrogenase, conserved site APE_1586a IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APE_1586a IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APE_1586a IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APE_1588a IPR013815 ATP-grasp fold, subdomain 1 APE_1588a IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding APE_1588a IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APE_1588a IPR008279 PEP-utilising enzyme, mobile domain APE_1588a IPR006319 Phosphoenolpyruvate synthase APE_1588a IPR018274 PEP-utilising enzyme, active site APE_1588a IPR040442 Pyruvate kinase-like domain superfamily APE_1588a IPR036637 Phosphohistidine domain superfamily APE_1588a IPR023151 PEP-utilising enzyme, conserved site APE_1588a IPR000121 PEP-utilising enzyme, C-terminal APE_1588b IPR036637 Phosphohistidine domain superfamily APE_1588b IPR008279 PEP-utilising enzyme, mobile domain APE_1588b IPR013815 ATP-grasp fold, subdomain 1 APE_1588b IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding APE_1591.1 IPR036046 Acylphosphatase-like domain superfamily APE_1591.1 IPR020456 Acylphosphatase APE_1591.1 IPR017968 Acylphosphatase, conserved site APE_1591.1 IPR001792 Acylphosphatase-like domain APE_1592.1 IPR015803 Cysteine-tRNA ligase APE_1592.1 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR APE_1592.1 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase APE_1592.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_1592.1 IPR032678 tRNA synthetases class I, catalytic domain APE_1592.1 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APE_1594 IPR035985 Ubiquitin-activating enzyme APE_1594 IPR001763 Rhodanese-like domain APE_1594 IPR000594 THIF-type NAD/FAD binding fold APE_1594 IPR036873 Rhodanese-like domain superfamily APE_1596 IPR027790 S-adenosylmethionine synthase APE_1596 IPR002795 S-adenosylmethionine synthetase, archaea APE_1604 IPR017456 CTP synthase, N-terminal APE_1604 IPR029062 Class I glutamine amidotransferase-like APE_1604 IPR004468 CTP synthase APE_1604 IPR033828 CTP synthase GATase domain APE_1604 IPR017926 Glutamine amidotransferase APE_1604 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1605.1 IPR023214 HAD superfamily APE_1605.1 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 APE_1605.1 IPR006357 HAD-superfamily hydrolase, subfamily IIA APE_1605.1 IPR036412 HAD-like superfamily APE_1616.1 IPR042253 2,3-bisphosphoglycerate-independent phosphoglycerate mutase superfamily APE_1616.1 IPR006124 Metalloenzyme APE_1616.1 IPR023665 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, prokaryotes APE_1616.1 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase APE_1616.1 IPR017850 Alkaline-phosphatase-like, core domain superfamily APE_1618.1 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 APE_1618.1 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain APE_1618.1 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain APE_1618.1 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APE_1618.1 IPR036008 Aconitase, iron-sulfur domain APE_1618.1 IPR006249 Aconitase/Iron-responsive element-binding protein 2 APE_1618.1 IPR018136 Aconitase family, 4Fe-4S cluster binding site APE_1622.1 IPR002938 FAD-binding domain APE_1622.1 IPR036188 FAD/NAD(P)-binding domain superfamily APE_1623 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site APE_1623 IPR000883 Cytochrome c oxidase subunit I APE_1623 IPR036927 Cytochrome c oxidase-like, subunit I superfamily APE_1623 IPR033943 Ba3-like heme-copper oxidase subunit I APE_1623 IPR023616 Cytochrome c oxidase-like, subunit I domain APE_1632 IPR035906 MetI-like superfamily APE_1632 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_1635.1 IPR008995 Molybdate/tungstate binding, C-terminal APE_1635.1 IPR040582 MalK, OB fold domain APE_1635.1 IPR003439 ABC transporter-like APE_1635.1 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC APE_1635.1 IPR003593 AAA+ ATPase domain APE_1635.1 IPR017871 ABC transporter, conserved site APE_1635.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1637.1 IPR023696 Ureohydrolase domain superfamily APE_1637.1 IPR005925 Agmatinase-related APE_1637.1 IPR006035 Ureohydrolase APE_1637.1 IPR020855 Ureohydrolase, manganese-binding site APE_1639 IPR022961 Glycine-tRNA ligase, bacterial APE_1639 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) APE_1639 IPR033731 Glycyl-tRNA synthetase-like core domain APE_1639 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 APE_1639 IPR002315 Glycyl-tRNA synthetase APE_1639 IPR036621 Anticodon-binding domain superfamily APE_1639 IPR004154 Anticodon-binding APE_1639 IPR006195 Aminoacyl-tRNA synthetase, class II APE_1647 IPR036551 Flavin prenyltransferase-like APE_1647 IPR003382 Flavoprotein APE_1647 IPR004507 Flavin prenyltransferase UbiX-like APE_1648.1 IPR002589 Macro domain APE_1652 IPR013483 Molybdenum cofactor biosynthesis protein A APE_1652 IPR010505 Molybdenum cofactor synthesis C-terminal APE_1652 IPR007197 Radical SAM APE_1652 IPR013785 Aldolase-type TIM barrel APE_1652 IPR006638 Elp3/MiaB/NifB APE_1652 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site APE_1655 IPR030896 Heme b synthase APE_1655 IPR017200 Coenzyme PQQ synthesis protein E APE_1655 IPR034391 Cmo-like SPASM domain containing APE_1655 IPR006638 Elp3/MiaB/NifB APE_1655 IPR007197 Radical SAM APE_1655 IPR013785 Aldolase-type TIM barrel APE_1655 IPR023885 4Fe4S-binding SPASM domain APE_1659 IPR036812 NADP-dependent oxidoreductase domain superfamily APE_1659 IPR020471 Aldo/keto reductase APE_1659 IPR023210 NADP-dependent oxidoreductase domain APE_1662.1 IPR002801 Aspartate transcarbamylase regulatory subunit APE_1662.1 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal APE_1662.1 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily APE_1662.1 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily APE_1662.1 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal APE_1663.1 IPR002082 Aspartate carbamoyltransferase APE_1663.1 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain APE_1663.1 IPR006130 Aspartate/ornithine carbamoyltransferase APE_1663.1 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily APE_1663.1 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding APE_1668 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APE_1668 IPR011322 Nitrogen regulatory PII-like, alpha/beta APE_1668 IPR004323 Divalent ion tolerance protein, CutA APE_1669.1 IPR036188 FAD/NAD(P)-binding domain superfamily APE_1669.1 IPR023753 FAD/NAD(P)-binding domain APE_1669.1 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily APE_1669.1 IPR006258 Dihydrolipoamide dehydrogenase APE_1669.1 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I APE_1669.1 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APE_1669.1 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site APE_1671 IPR004167 Peripheral subunit-binding domain APE_1671 IPR011053 Single hybrid motif APE_1671 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily APE_1671 IPR036625 E3-binding domain superfamily APE_1671 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APE_1671 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain APE_1671 IPR000089 Biotin/lipoyl attachment APE_1674 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II APE_1674 IPR005475 Transketolase-like, pyrimidine-binding domain APE_1674 IPR029061 Thiamin diphosphate-binding fold APE_1674 IPR033248 Transketolase, C-terminal domain APE_1677.1 IPR029061 Thiamin diphosphate-binding fold APE_1677.1 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha APE_1677.1 IPR001017 Dehydrogenase, E1 component APE_1681.1 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APE_1681.1 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APE_1681.1 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APE_1681.1 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APE_1681.1 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APE_1681.1 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APE_1681.1 IPR006089 Acyl-CoA dehydrogenase, conserved site APE_1683.1 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB APE_1683.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1686.1 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic APE_1686.1 IPR006158 Cobalamin (vitamin B12)-binding domain APE_1686.1 IPR006159 Methylmalonyl-CoA mutase, C-terminal APE_1686.1 IPR036724 Cobalamin-binding domain superfamily APE_1686.1 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic APE_1686.1 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic APE_1687 IPR006159 Methylmalonyl-CoA mutase, C-terminal APE_1687 IPR006158 Cobalamin (vitamin B12)-binding domain APE_1687 IPR036724 Cobalamin-binding domain superfamily APE_1687 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic APE_1687 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic APE_1687 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic APE_1691 IPR003689 Zinc/iron permease APE_1692.1 IPR008162 Inorganic pyrophosphatase APE_1692.1 IPR036649 Inorganic pyrophosphatase superfamily APE_1694.1 IPR023755 Heme A synthase, type 1 APE_1694.1 IPR003780 COX15/CtaA family APE_1695.1 IPR006222 Aminomethyltransferase, folate-binding domain APE_1695.1 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal APE_1695.1 IPR006223 Glycine cleavage system T protein APE_1695.1 IPR022903 Glycine cleavage system T protein, bacteria APE_1695.1 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 APE_1695.1 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain APE_1695.1 IPR028896 Aminomethyltransferase-like APE_1702 IPR003593 AAA+ ATPase domain APE_1702 IPR003439 ABC transporter-like APE_1702 IPR010230 FeS cluster assembly SUF system, ATPase SufC APE_1702 IPR017871 ABC transporter, conserved site APE_1702 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1703 IPR010231 SUF system FeS cluster assembly, SufB APE_1703 IPR000825 SUF system FeS cluster assembly, SufBD APE_1703 IPR037284 SUF system FeS cluster assembly, SufBD superfamily APE_1713 IPR024176 Citrate synthase, bacterial-type APE_1713 IPR019810 Citrate synthase active site APE_1713 IPR002020 Citrate synthase APE_1713 IPR016143 Citrate synthase-like, small alpha subdomain APE_1713 IPR016142 Citrate synthase-like, large alpha subdomain APE_1713 IPR011278 2-methylcitrate synthase/citrate synthase type I APE_1713 IPR036969 Citrate synthase superfamily APE_1717.1 IPR023631 Amidase signature domain APE_1717.1 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit APE_1717.1 IPR036928 Amidase signature (AS) superfamily APE_1717.1 IPR020556 Amidase, conserved site APE_1717.1 IPR000120 Amidase APE_1718 IPR018027 Asn/Gln amidotransferase APE_1718 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain APE_1718 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site APE_1718 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 APE_1718 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 APE_1718 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like APE_1718 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit APE_1718 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E APE_1718 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic APE_1720 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily APE_1720 IPR008972 Cupredoxin APE_1720 IPR001505 Copper centre Cu(A) APE_1720 IPR002429 Cytochrome c oxidase subunit II-like C-terminal APE_1720 IPR034214 Ba3-like heme-copper oxidase subunit II, C-terminal APE_1720 IPR015209 Cytochrome C oxidase subunit IIa, transmembrane domain APE_1722 IPR005746 Thioredoxin APE_1722 IPR017937 Thioredoxin, conserved site APE_1722 IPR013766 Thioredoxin domain APE_1722 IPR036249 Thioredoxin-like superfamily APE_1723.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_1723.1 IPR002935 Class I-like SAM-dependent O-methyltransferase APE_1724.1 IPR017941 Rieske [2Fe-2S] iron-sulphur domain APE_1724.1 IPR014067 Arsenite oxidase, small subunit APE_1724.1 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily APE_1724.1 IPR006311 Twin-arginine translocation pathway, signal sequence APE_1724.1 IPR005805 Rieske iron-sulphur protein, C-terminal APE_1724.1 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APE_1724.1 IPR014349 Rieske iron-sulphur protein APE_1725 IPR030689 Cytochrome b APE_1725 IPR005798 Cytochrome b/b6, C-terminal APE_1725 IPR036150 Cytochrome b/b6, C-terminal domain superfamily APE_1725 IPR005797 Cytochrome b/b6, N-terminal APE_1725 IPR027387 Cytochrome b/b6-like domain superfamily APE_1725 IPR016174 Di-haem cytochrome, transmembrane APE_1730.1 IPR035906 MetI-like superfamily APE_1730.1 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_1732 IPR017871 ABC transporter, conserved site APE_1732 IPR013611 Transport-associated OB, type 2 APE_1732 IPR008995 Molybdate/tungstate binding, C-terminal APE_1732 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit APE_1732 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1732 IPR003439 ABC transporter-like APE_1732 IPR003593 AAA+ ATPase domain APE_1732 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA APE_1735 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain APE_1735 IPR022941 Signal recognition particle, SRP54 subunit APE_1735 IPR004125 Signal recognition particle, SRP54 subunit, M-domain APE_1735 IPR003593 AAA+ ATPase domain APE_1735 IPR013822 Signal recognition particle SRP54, helical bundle APE_1735 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily APE_1735 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1735 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily APE_1735 IPR004780 Signal recognition particle protein APE_1737.1 IPR001892 Ribosomal protein S13 APE_1737.1 IPR010979 Ribosomal protein S13-like, H2TH APE_1737.1 IPR018269 Ribosomal protein S13, conserved site APE_1737.1 IPR019980 Ribosomal protein S13, bacterial-type APE_1737.1 IPR027437 30s ribosomal protein S13, C-terminal APE_1739.1 IPR022801 Ribosomal protein S4/S9 APE_1739.1 IPR001912 Ribosomal protein S4/S9, N-terminal APE_1739.1 IPR005709 Ribosomal protein S4, bacterial-type APE_1739.1 IPR018079 Ribosomal protein S4, conserved site APE_1739.1 IPR002942 RNA-binding S4 domain APE_1739.1 IPR036986 RNA-binding S4 domain superfamily APE_1742.1 IPR019981 Ribosomal protein S11, bacterial-type APE_1742.1 IPR018102 Ribosomal S11, conserved site APE_1742.1 IPR036967 Ribosomal protein S11 superfamily APE_1742.1 IPR001971 Ribosomal protein S11 APE_1747 IPR036899 Ribosomal protein L13 superfamily APE_1747 IPR005822 Ribosomal protein L13 APE_1747 IPR005823 Ribosomal protein L13, bacterial-type APE_1749 IPR000754 Ribosomal protein S9 APE_1749 IPR023035 Ribosomal protein S9, bacterial/plastid APE_1749 IPR020574 Ribosomal protein S9, conserved site APE_1749 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_1749 IPR020568 Ribosomal protein S5 domain 2-type fold APE_1750 IPR001865 Ribosomal protein S2 APE_1750 IPR018130 Ribosomal protein S2, conserved site APE_1750 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid APE_1750 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily APE_1756 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APE_1756 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APE_1756 IPR001278 Arginine-tRNA ligase APE_1756 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_1756 IPR008909 DALR anticodon binding APE_1756 IPR005148 Arginyl tRNA synthetase N-terminal domain APE_1756 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily APE_1756 IPR035684 Arginyl-tRNA synthetase, catalytic core domain APE_1758.1 IPR036025 tRNA-splicing ligase RtcB-like superfamily APE_1758.1 IPR001233 tRNA-splicing ligase, RtcB APE_1764.1 IPR000092 Polyprenyl synthetase APE_1764.1 IPR033749 Polyprenyl synthetase, conserved site APE_1764.1 IPR008949 Isoprenoid synthase domain superfamily APE_1765.1 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent APE_1765.1 IPR000262 FMN-dependent dehydrogenase APE_1765.1 IPR013785 Aldolase-type TIM barrel APE_1771 IPR002737 MEMO1 family APE_1773.1 IPR002528 Multi antimicrobial extrusion protein APE_1775.1 IPR001333 Peptidase M32, carboxypeptidase Taq APE_1782.1 IPR029035 DHS-like NAD/FAD-binding domain superfamily APE_1782.1 IPR003000 Sirtuin family APE_1782.1 IPR026591 Sirtuin, catalytic core small domain superfamily APE_1782.1 IPR027546 Sirtuin, class III APE_1782.1 IPR026590 Sirtuin family, catalytic core domain APE_1786.1 IPR016161 Aldehyde/histidinol dehydrogenase APE_1786.1 IPR016163 Aldehyde dehydrogenase, C-terminal APE_1786.1 IPR016160 Aldehyde dehydrogenase, cysteine active site APE_1786.1 IPR016162 Aldehyde dehydrogenase, N-terminal APE_1786.1 IPR015590 Aldehyde dehydrogenase domain APE_1792 IPR004175 RNA 2',3'-cyclic phosphodiesterase APE_1792 IPR014051 Phosphoesterase, HXTX APE_1792 IPR009097 Cyclic phosphodiesterase APE_1794 IPR023406 DNA topoisomerase, type IA, active site APE_1794 IPR034144 DNA topoisomerase 3-like, TOPRIM domain APE_1794 IPR006171 TOPRIM domain APE_1794 IPR005738 DNA topoisomerase III APE_1794 IPR003602 DNA topoisomerase, type IA, DNA-binding domain APE_1794 IPR013497 DNA topoisomerase, type IA, central APE_1794 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APE_1794 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APE_1794 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 APE_1794 IPR023405 DNA topoisomerase, type IA, core domain APE_1794 IPR000380 DNA topoisomerase, type IA APE_1794 IPR003601 DNA topoisomerase, type IA, domain 2 APE_1797 IPR012340 Nucleic acid-binding, OB-fold APE_1797 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily APE_1797 IPR005121 Ferrodoxin-fold anticodon-binding domain APE_1797 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit APE_1797 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APE_1797 IPR005146 B3/B4 tRNA-binding domain APE_1797 IPR002547 tRNA-binding domain APE_1797 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain APE_1797 IPR005147 tRNA synthetase, B5-domain APE_1797 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain APE_1797 IPR009061 Putative DNA-binding domain superfamily APE_1798.1 IPR022337 Inositol monophosphatase, SuhB APE_1798.1 IPR020550 Inositol monophosphatase, conserved site APE_1798.1 IPR020583 Inositol monophosphatase, metal-binding site APE_1798.1 IPR033942 Inositol monophosphatase APE_1798.1 IPR000760 Inositol monophosphatase-like APE_1805.1 IPR002300 Aminoacyl-tRNA synthetase, class Ia APE_1805.1 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APE_1805.1 IPR033705 Valyl tRNA synthetase, anticodon-binding domain APE_1805.1 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding APE_1805.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_1805.1 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm APE_1805.1 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APE_1805.1 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily APE_1805.1 IPR002303 Valine-tRNA ligase APE_1805.1 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain APE_1805.1 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm APE_1816.1 IPR024083 Fumarase/histidase, N-terminal APE_1816.1 IPR008948 L-Aspartase-like APE_1816.1 IPR020557 Fumarate lyase, conserved site APE_1816.1 IPR018951 Fumarase C, C-terminal APE_1816.1 IPR005677 Fumarate hydratase, class II APE_1816.1 IPR022761 Fumarate lyase, N-terminal APE_1816.1 IPR000362 Fumarate lyase family APE_1820 IPR036188 FAD/NAD(P)-binding domain superfamily APE_1829 IPR017871 ABC transporter, conserved site APE_1829 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1829 IPR003439 ABC transporter-like APE_1829 IPR003593 AAA+ ATPase domain APE_1831.1 IPR036291 NAD(P)-binding domain superfamily APE_1831.1 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APE_1831.1 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APE_1831.1 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APE_1831.1 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APE_1832 IPR011042 Six-bladed beta-propeller, TolB-like APE_1832 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain APE_1832 IPR011659 WD40-like Beta Propeller APE_1832 IPR029058 Alpha/Beta hydrolase fold APE_1834.1 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site APE_1834.1 IPR000836 Phosphoribosyltransferase domain APE_1834.1 IPR029057 Phosphoribosyltransferase-like APE_1834.1 IPR005946 Ribose-phosphate pyrophosphokinase APE_1834.1 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type APE_1834.1 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain APE_1836.1 IPR001279 Metallo-beta-lactamase APE_1836.1 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APE_1836.1 IPR013471 Ribonuclease Z/BN APE_1838.1 IPR000644 CBS domain APE_1838.1 IPR001093 IMP dehydrogenase/GMP reductase APE_1838.1 IPR013785 Aldolase-type TIM barrel APE_1838.1 IPR015875 IMP dehydrogenase / GMP reductase, conserved site APE_1838.1 IPR005990 Inosine-5'-monophosphate dehydrogenase APE_1842 IPR036838 Ribosomal protein S10 domain superfamily APE_1842 IPR027486 Ribosomal protein S10 domain APE_1842 IPR018268 Ribosomal protein S10, conserved site APE_1842 IPR001848 Ribosomal protein S10 APE_1844 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1844 IPR004161 Translation elongation factor EFTu-like, domain 2 APE_1844 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain APE_1844 IPR031157 Tr-type G domain, conserved site APE_1844 IPR033720 Elongation factor Tu, domain 2 APE_1844 IPR005225 Small GTP-binding protein domain APE_1844 IPR009000 Translation protein, beta-barrel domain superfamily APE_1844 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APE_1844 IPR000795 Transcription factor, GTP-binding domain APE_1844 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APE_1844 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle APE_1846.1 IPR005717 Ribosomal protein S7, bacterial/organellar-type APE_1846.1 IPR000235 Ribosomal protein S5/S7 APE_1846.1 IPR023798 Ribosomal protein S7 domain APE_1846.1 IPR036823 Ribosomal protein S7 domain superfamily APE_1846.1 IPR020606 Ribosomal protein S7, conserved site APE_1852.1 IPR038120 RNA polymerase Rpb1, funnel domain superfamily APE_1852.1 IPR007081 RNA polymerase Rpb1, domain 5 APE_1852.1 IPR012754 DNA-directed RNA polymerase, subunit beta-prime APE_1852.1 IPR000722 RNA polymerase, alpha subunit APE_1852.1 IPR006592 RNA polymerase, N-terminal APE_1852.1 IPR007083 RNA polymerase Rpb1, domain 4 APE_1852.1 IPR042102 RNA polymerase Rpb1, domain 3 superfamily APE_1852.1 IPR007066 RNA polymerase Rpb1, domain 3 APE_1852.1 IPR007080 RNA polymerase Rpb1, domain 1 APE_1853.1 IPR007081 RNA polymerase Rpb1, domain 5 APE_1853.1 IPR007080 RNA polymerase Rpb1, domain 1 APE_1853.1 IPR042102 RNA polymerase Rpb1, domain 3 superfamily APE_1853.1 IPR007066 RNA polymerase Rpb1, domain 3 APE_1853.1 IPR000722 RNA polymerase, alpha subunit APE_1853.1 IPR007083 RNA polymerase Rpb1, domain 4 APE_1853.1 IPR012754 DNA-directed RNA polymerase, subunit beta-prime APE_1853.1 IPR006592 RNA polymerase, N-terminal APE_1853.1 IPR038120 RNA polymerase Rpb1, funnel domain superfamily APE_1856 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain APE_1856 IPR007645 RNA polymerase Rpb2, domain 3 APE_1856 IPR037034 RNA polymerase Rpb2, domain 2 superfamily APE_1856 IPR007642 RNA polymerase Rpb2, domain 2 APE_1856 IPR007644 RNA polymerase, beta subunit, protrusion APE_1856 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain APE_1856 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type APE_1856 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily APE_1856 IPR007121 RNA polymerase, beta subunit, conserved site APE_1856 IPR015712 DNA-directed RNA polymerase, subunit 2 APE_1856 IPR007641 RNA polymerase Rpb2, domain 7 APE_1856 IPR014724 RNA polymerase Rpb2, OB-fold APE_1856 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily APE_1873.1 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APE_1873.1 IPR016039 Thiolase-like APE_1873.1 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 APE_1873.1 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal APE_1874.1 IPR006638 Elp3/MiaB/NifB APE_1874.1 IPR010505 Molybdenum cofactor synthesis C-terminal APE_1874.1 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site APE_1874.1 IPR013483 Molybdenum cofactor biosynthesis protein A APE_1874.1 IPR007197 Radical SAM APE_1874.1 IPR013785 Aldolase-type TIM barrel APE_1877.1 IPR022764 Peptidase S54, rhomboid domain APE_1877.1 IPR035952 Rhomboid-like superfamily APE_1878 IPR030470 UbiA prenyltransferase conserved site APE_1878 IPR006369 Protohaem IX farnesyltransferase APE_1878 IPR000537 UbiA prenyltransferase family APE_1885 IPR000845 Nucleoside phosphorylase domain APE_1885 IPR010044 Methylthioadenosine phosphorylase (MTAP) APE_1885 IPR018099 Purine phosphorylase, family 2, conserved site APE_1885 IPR035994 Nucleoside phosphorylase superfamily APE_1889 IPR013216 Methyltransferase type 11 APE_1889 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_1891.1 IPR003593 AAA+ ATPase domain APE_1891.1 IPR003439 ABC transporter-like APE_1891.1 IPR017871 ABC transporter, conserved site APE_1891.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1891.1 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APE_1892 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APE_1892 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_1892 IPR035906 MetI-like superfamily APE_1893.1 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APE_1893.1 IPR023703 Membrane-bound lytic murein transglycosylase F APE_1893.1 IPR023346 Lysozyme-like domain superfamily APE_1893.1 IPR008258 Transglycosylase SLT domain 1 APE_1893.1 IPR000189 Prokaryotic transglycosylase, active site APE_1896.1 IPR001482 Type II/IV secretion system protein APE_1896.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1896.1 IPR014155 Type IV secretion system protein VirB11 APE_1898 IPR041166 LapB, rubredoxin metal binding domain APE_1898 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_1898 IPR003593 AAA+ ATPase domain APE_1898 IPR020568 Ribosomal protein S5 domain 2-type fold APE_1898 IPR004504 DNA repair protein RadA APE_1898 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1898 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain APE_1911.1 IPR026253 Methionine import ATP-binding protein MetN APE_1911.1 IPR003439 ABC transporter-like APE_1911.1 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal APE_1911.1 IPR003593 AAA+ ATPase domain APE_1911.1 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain APE_1911.1 IPR018449 NIL domain APE_1911.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1911.1 IPR017871 ABC transporter, conserved site APE_1917 IPR002933 Peptidase M20 APE_1917 IPR036264 Bacterial exopeptidase dimerisation domain APE_1917 IPR011650 Peptidase M20, dimerisation domain APE_1917 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria APE_1932.1 IPR032688 ABC-2 family transporter protein APE_1934.1 IPR003439 ABC transporter-like APE_1934.1 IPR003593 AAA+ ATPase domain APE_1934.1 IPR017871 ABC transporter, conserved site APE_1934.1 IPR015851 ABC transporter, NodI APE_1934.1 IPR005978 Nodulation ABC transporter, NodI APE_1934.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_1940.1 IPR001347 Sugar isomerase (SIS) APE_1940.1 IPR017552 3-hexulose-6-phosphate isomerase APE_1950.1 IPR031107 Small heat shock protein HSP20 APE_1950.1 IPR002068 Alpha crystallin/Hsp20 domain APE_1950.1 IPR008978 HSP20-like chaperone APE_1958.1 IPR003694 NAD(+) synthetase APE_1958.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_1958.1 IPR022310 NAD/GMP synthase APE_1958.1 IPR022926 NH(3)-dependent NAD(+) synthetase APE_1959.1 IPR003382 Flavoprotein APE_1959.1 IPR036551 Flavin prenyltransferase-like APE_1959.1 IPR035929 CoaB-like superfamily APE_1959.1 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC APE_1959.1 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal APE_1961 IPR020471 Aldo/keto reductase APE_1961 IPR018170 Aldo/keto reductase, conserved site APE_1961 IPR036812 NADP-dependent oxidoreductase domain superfamily APE_1961 IPR023210 NADP-dependent oxidoreductase domain APE_1962.1 IPR039429 Serine hydroxymethyltransferase-like domain APE_1962.1 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site APE_1962.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_1962.1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_1962.1 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APE_1962.1 IPR001085 Serine hydroxymethyltransferase APE_1963.1 IPR039697 Iron-type alcohol dehydrogenase-like APE_1963.1 IPR018211 Alcohol dehydrogenase, iron-type, conserved site APE_1963.1 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA APE_1968 IPR036393 Acetylglutamate kinase-like superfamily APE_1968 IPR003964 Carbamate kinase APE_1968 IPR001048 Aspartate/glutamate/uridylate kinase APE_1976.1 IPR006195 Aminoacyl-tRNA synthetase, class II APE_1976.1 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) APE_1976.1 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm APE_1976.1 IPR033729 Serine-tRNA ligase catalytic core domain APE_1976.1 IPR002317 Serine-tRNA ligase, type1 APE_1976.1 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily APE_1976.1 IPR015866 Serine-tRNA synthetase, type1, N-terminal APE_1979.1 IPR034904 Fe-S cluster assembly domain superfamily APE_1979.1 IPR002744 MIP18 family-like APE_1980.1 IPR036653 CinA-like, C-terminal APE_1980.1 IPR008136 CinA, C-terminal APE_1980.1 IPR036425 MoaB/Mog-like domain superfamily APE_1980.1 IPR001453 MoaB/Mog domain APE_1980.1 IPR008135 Competence-induced protein CinA APE_1980.1 IPR041424 CinA, KH domain APE_1992.1 IPR024904 Ornithine carbamoyltransferase APE_1992.1 IPR002292 Ornithine/putrescine carbamoyltransferase APE_1992.1 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily APE_1992.1 IPR006130 Aspartate/ornithine carbamoyltransferase APE_1992.1 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding APE_1992.1 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain APE_2002 IPR018117 DNA methylase, C-5 cytosine-specific, active site APE_2002 IPR001525 C-5 cytosine methyltransferase APE_2002 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site APE_2002 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_2007 IPR032305 GTP-binding protein, middle domain APE_2007 IPR006073 GTP binding domain APE_2007 IPR042108 GTPase HflX, N-terminal domain superfamily APE_2007 IPR025121 GTPase HflX, N-terminal APE_2007 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2007 IPR016496 GTPase HflX APE_2007 IPR030394 HflX-type guanine nucleotide-binding (G) domain APE_2012 IPR003960 ATPase, AAA-type, conserved site APE_2012 IPR041569 AAA ATPase, AAA+ lid domain APE_2012 IPR003593 AAA+ ATPase domain APE_2012 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2012 IPR003959 ATPase, AAA-type, core APE_2012 IPR000642 Peptidase M41 APE_2012 IPR005936 Peptidase, FtsH APE_2012 IPR011546 Peptidase M41, FtsH extracellular APE_2012 IPR037219 Peptidase M41-like APE_2017 IPR004803 tRNA-guanine transglycosylase APE_2017 IPR036511 Queuine tRNA-ribosyltransferase-like APE_2017 IPR002616 tRNA-guanine(15) transglycosylase-like APE_2021.1 IPR036388 Winged helix-like DNA-binding domain superfamily APE_2021.1 IPR002481 Ferric-uptake regulator APE_2021.1 IPR036390 Winged helix DNA-binding domain superfamily APE_2023 IPR010970 Cysteine desulfurase, SufS APE_2023 IPR000192 Aminotransferase class V domain APE_2023 IPR016454 Cysteine desulfurase APE_2023 IPR015424 Pyridoxal phosphate-dependent transferase APE_2023 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APE_2023 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APE_2023 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_2029.1 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily APE_2029.1 IPR002805 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, putative APE_2029.1 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like APE_2035.1 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site APE_2035.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_2035.1 IPR005861 Histidinol-phosphate aminotransferase family APE_2035.1 IPR004839 Aminotransferase, class I/classII APE_2035.1 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APE_2035.1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_2037.1 IPR003805 Adenosylcobinamide-GDP ribazoletransferase APE_2039.1 IPR004485 Cobalamin biosynthesis CobD/CbiB APE_2044.1 IPR010918 PurM-like, C-terminal domain APE_2044.1 IPR036676 PurM-like, C-terminal domain superfamily APE_2044.1 IPR016188 PurM-like, N-terminal domain APE_2044.1 IPR036921 PurM-like, N-terminal domain superfamily APE_2044.1 IPR011854 Carbamoyl dehydratase HypE APE_2048 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal APE_2048 IPR038071 UROD/MetE-like superfamily APE_2048 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal APE_2048 IPR006276 Cobalamin-independent methionine synthase APE_2050.1 IPR006276 Cobalamin-independent methionine synthase APE_2050.1 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal APE_2050.1 IPR038071 UROD/MetE-like superfamily APE_2050.1 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal APE_2052.1 IPR006169 GTP1/OBG domain APE_2052.1 IPR014100 GTP-binding protein Obg/CgtA APE_2052.1 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily APE_2052.1 IPR031167 OBG-type guanine nucleotide-binding (G) domain APE_2052.1 IPR006074 GTP1/OBG, conserved site APE_2052.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2052.1 IPR015349 GTP-binding protein OBG, C-terminal APE_2052.1 IPR006073 GTP binding domain APE_2052.1 IPR036726 GTP1/OBG domain superfamily APE_2060.1 IPR003593 AAA+ ATPase domain APE_2060.1 IPR017871 ABC transporter, conserved site APE_2060.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2060.1 IPR040582 MalK, OB fold domain APE_2060.1 IPR003439 ABC transporter-like APE_2060.1 IPR008995 Molybdate/tungstate binding, C-terminal APE_2060.1 IPR005116 Transport-associated OB, type 1 APE_2062.1 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal APE_2062.1 IPR013509 Ribonucleotide reductase large subunit, N-terminal APE_2062.1 IPR005144 ATP-cone domain APE_2062.1 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent APE_2062.1 IPR000788 Ribonucleotide reductase large subunit, C-terminal APE_2064.1 IPR036098 Thymidylate synthase ThyX superfamily APE_2064.1 IPR003669 Thymidylate synthase ThyX APE_2066.1 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APE_2067.1 IPR036554 GHMP kinase, C-terminal domain superfamily APE_2067.1 IPR006204 GHMP kinase N-terminal domain APE_2067.1 IPR006203 GHMP kinase, ATP-binding, conserved site APE_2067.1 IPR000870 Homoserine kinase APE_2067.1 IPR020568 Ribosomal protein S5 domain 2-type fold APE_2067.1 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_2067.1 IPR013750 GHMP kinase, C-terminal domain APE_2068 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APE_2068 IPR015424 Pyridoxal phosphate-dependent transferase APE_2068 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_2068 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme APE_2071.1 IPR000836 Phosphoribosyltransferase domain APE_2071.1 IPR023747 Xanthine-guanine phosphoribosyltransferase APE_2071.1 IPR029057 Phosphoribosyltransferase-like APE_2072.1 IPR018370 Chaperonin Cpn60, conserved site APE_2072.1 IPR027409 GroEL-like apical domain superfamily APE_2072.1 IPR027413 GroEL-like equatorial domain superfamily APE_2072.1 IPR001844 Chaperonin Cpn60 APE_2072.1 IPR002423 Chaperonin Cpn60/TCP-1 family APE_2072.1 IPR027410 TCP-1-like chaperonin intermediate domain superfamily APE_2074.1 IPR002942 RNA-binding S4 domain APE_2074.1 IPR036986 RNA-binding S4 domain superfamily APE_2074.1 IPR002307 Tyrosine-tRNA ligase APE_2074.1 IPR024088 Tyrosine-tRNA ligase, bacterial-type APE_2074.1 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 APE_2074.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2074.1 IPR002305 Aminoacyl-tRNA synthetase, class Ic APE_2078 IPR023677 UbiD decarboxylyase, bacteria APE_2078 IPR002830 UbiD decarboxylyase family APE_2080.1 IPR000086 NUDIX hydrolase domain APE_2080.1 IPR020476 NUDIX hydrolase APE_2080.1 IPR020084 NUDIX hydrolase, conserved site APE_2080.1 IPR015797 NUDIX hydrolase-like domain superfamily APE_2081.1 IPR000787 Peptidase M29 APE_2081.1 IPR035097 Peptidase M29, N-terminal APE_2085.1 IPR013185 Translation elongation factor, KOW-like APE_2085.1 IPR011768 Translation elongation factor P APE_2085.1 IPR008991 Translation protein SH3-like domain superfamily APE_2085.1 IPR012340 Nucleic acid-binding, OB-fold APE_2085.1 IPR015365 Elongation factor P, C-terminal APE_2085.1 IPR020599 Translation elongation factor P/YeiP APE_2085.1 IPR001059 Translation elongation factor P/YeiP, central APE_2085.1 IPR014722 Ribosomal protein L2, domain 2 APE_2086 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2086 IPR000541 Cytoplasmic tRNA 2-thiolation protein 1 APE_2086 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type APE_2086 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APE_2090 IPR018094 Thymidylate kinase APE_2090 IPR018095 Thymidylate kinase, conserved site APE_2090 IPR039430 Thymidylate kinase-like domain APE_2090 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2091.1 IPR000600 ROK family APE_2091.1 IPR023945 N-acetylmannosamine kinase, bacterial APE_2094.1 IPR000623 Shikimate kinase/Threonine synthase-like 1 APE_2094.1 IPR031322 Shikimate kinase/gluconokinase APE_2094.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2094.1 IPR023000 Shikimate kinase, conserved site APE_2104.1 IPR001719 AP endonuclease 2 APE_2104.1 IPR036237 Xylose isomerase-like superfamily APE_2104.1 IPR013022 Xylose isomerase-like, TIM barrel domain APE_2104.1 IPR018246 AP endonuclease 2, zinc binding site APE_2105.1 IPR000845 Nucleoside phosphorylase domain APE_2105.1 IPR018016 Nucleoside phosphorylase, conserved site APE_2105.1 IPR010058 Uridine phosphorylase APE_2105.1 IPR035994 Nucleoside phosphorylase superfamily APE_2106.1 IPR002139 Ribokinase/fructokinase APE_2106.1 IPR011611 Carbohydrate kinase PfkB APE_2106.1 IPR011877 Ribokinase APE_2106.1 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site APE_2106.1 IPR029056 Ribokinase-like APE_2108 IPR020616 Thiolase, N-terminal APE_2108 IPR020613 Thiolase, conserved site APE_2108 IPR020610 Thiolase, active site APE_2108 IPR002155 Thiolase APE_2108 IPR020617 Thiolase, C-terminal APE_2108 IPR016039 Thiolase-like APE_2109 IPR005839 Methylthiotransferase APE_2109 IPR006638 Elp3/MiaB/NifB APE_2109 IPR013848 Methylthiotransferase, N-terminal APE_2109 IPR038135 Methylthiotransferase, N-terminal domain superfamily APE_2109 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB APE_2109 IPR007197 Radical SAM APE_2109 IPR023404 Radical SAM, alpha/beta horseshoe APE_2109 IPR002792 TRAM domain APE_2109 IPR020612 Methylthiotransferase, conserved site APE_2121.1 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 APE_2121.1 IPR020581 Glycine cleavage system P protein APE_2121.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_2121.1 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APE_2121.1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_2124.1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_2124.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_2124.1 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 APE_2124.1 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APE_2124.1 IPR020581 Glycine cleavage system P protein APE_2125.1 IPR013766 Thioredoxin domain APE_2125.1 IPR036249 Thioredoxin-like superfamily APE_2125.1 IPR024706 Peroxiredoxin, AhpC-type APE_2125.1 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APE_2126.1 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II APE_2126.1 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain APE_2126.1 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal APE_2126.1 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain APE_2126.1 IPR029061 Thiamin diphosphate-binding fold APE_2126.1 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II APE_2126.1 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit APE_2128 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding APE_2128 IPR029061 Thiamin diphosphate-binding fold APE_2130.1 IPR005814 Aminotransferase class-III APE_2130.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_2130.1 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APE_2130.1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_2130.1 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase APE_2136.1 IPR011852 TRAP transporter solute receptor, TAXI family APE_2139a IPR006312 Sec-independent protein translocase protein TatA/E APE_2139a IPR003369 Sec-independent protein translocase protein TatA/B/E APE_2142.1 IPR027302 Glutamine synthetase, N-terminal conserved site APE_2142.1 IPR001637 Glutamine synthetase class-I, adenylation site APE_2142.1 IPR027303 Glutamine synthetase, glycine-rich site APE_2142.1 IPR008146 Glutamine synthetase, catalytic domain APE_2142.1 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain APE_2142.1 IPR004809 Glutamine synthetase type I APE_2142.1 IPR008147 Glutamine synthetase, beta-Grasp domain APE_2142.1 IPR036651 Glutamine synthetase, N-terminal domain superfamily APE_2144.1 IPR011545 DEAD/DEAH box helicase domain APE_2144.1 IPR014001 Helicase superfamily 1/2, ATP-binding domain APE_2144.1 IPR001650 Helicase, C-terminal APE_2144.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2144.1 IPR013701 DEAD/H associated APE_2144.1 IPR003593 AAA+ ATPase domain APE_2147.1 IPR042188 MmgE/PrpD superfamily, domain 2 APE_2147.1 IPR005656 MmgE/PrpD APE_2147.1 IPR042183 MmgE/PrpD superfamily, domain 1 APE_2147.1 IPR036148 MmgE/PrpD superfamily APE_2149.1 IPR022828 Thiazole biosynthetic enzyme, prokaryotic APE_2149.1 IPR002922 Thiazole biosynthetic enzyme Thi4 family APE_2149.1 IPR036188 FAD/NAD(P)-binding domain superfamily APE_2153.1 IPR001107 Band 7 domain APE_2153.1 IPR036013 Band 7/SPFH domain superfamily APE_2153.1 IPR032435 Band 7, C-terminal extension APE_2153.1 IPR001972 Stomatin family APE_2153.1 IPR018080 Band 7/stomatin-like, conserved site APE_2154.1 IPR019820 Sec-independent periplasmic protein translocase, conserved site APE_2154.1 IPR002033 Sec-independent periplasmic protein translocase TatC APE_2154a IPR003369 Sec-independent protein translocase protein TatA/B/E APE_2154a IPR006312 Sec-independent protein translocase protein TatA/E APE_2154b IPR003593 AAA+ ATPase domain APE_2154b IPR003439 ABC transporter-like APE_2154b IPR017871 ABC transporter, conserved site APE_2154b IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APE_2154b IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2156.1 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APE_2156.1 IPR001279 Metallo-beta-lactamase APE_2156.1 IPR017782 Hydroxyacylglutathione hydrolase APE_2156.1 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain APE_2156.1 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain APE_2158.1 IPR006089 Acyl-CoA dehydrogenase, conserved site APE_2158.1 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APE_2158.1 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APE_2158.1 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APE_2158.1 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APE_2158.1 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APE_2158.1 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APE_2162.1 IPR025299 CstA, C-terminal domain APE_2162.1 IPR003706 CstA, N-terminal domain APE_2164.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2164.1 IPR008978 HSP20-like chaperone APE_2164.1 IPR016300 Arsenical pump ATPase, ArsA/GET3 APE_2164.1 IPR025723 Anion-transporting ATPase-like domain APE_2164.1 IPR040612 ArsA, HSP20-like domain APE_2165 IPR025723 Anion-transporting ATPase-like domain APE_2165 IPR016300 Arsenical pump ATPase, ArsA/GET3 APE_2165 IPR008978 HSP20-like chaperone APE_2165 IPR040612 ArsA, HSP20-like domain APE_2165 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2166 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily APE_2166 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily APE_2166 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain APE_2166 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal APE_2166 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria APE_2166 IPR012947 Threonyl/alanyl tRNA synthetase, SAD APE_2166 IPR009000 Translation protein, beta-barrel domain superfamily APE_2166 IPR003156 DHHA1 domain APE_2166 IPR002318 Alanine-tRNA ligase, class IIc APE_2173.1 IPR023674 Ribosomal protein L1-like APE_2173.1 IPR002143 Ribosomal protein L1 APE_2173.1 IPR005878 Ribosomal protein L1, bacterial-type APE_2173.1 IPR023673 Ribosomal protein L1, conserved site APE_2173.1 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich APE_2173.1 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein APE_2174 IPR020783 Ribosomal protein L11, C-terminal APE_2174 IPR036769 Ribosomal protein L11, C-terminal domain superfamily APE_2174 IPR006519 Ribosomal protein L11, bacterial-type APE_2174 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily APE_2174 IPR000911 Ribosomal protein L11/L12 APE_2174 IPR020785 Ribosomal protein L11, conserved site APE_2174 IPR020784 Ribosomal protein L11, N-terminal APE_2188.1 IPR003593 AAA+ ATPase domain APE_2188.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2188.1 IPR001650 Helicase, C-terminal APE_2188.1 IPR014001 Helicase superfamily 1/2, ATP-binding domain APE_2188.1 IPR013701 DEAD/H associated APE_2188.1 IPR011545 DEAD/DEAH box helicase domain APE_2192.1 IPR012340 Nucleic acid-binding, OB-fold APE_2192.1 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb APE_2192.1 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type APE_2192.1 IPR006195 Aminoacyl-tRNA synthetase, class II APE_2192.1 IPR004523 Aspartate-tRNA synthetase, type 2 APE_2192.1 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) APE_2200 IPR037152 L-asparaginase, N-terminal domain superfamily APE_2200 IPR027474 L-asparaginase, N-terminal APE_2200 IPR040919 Asparaginase/glutaminase, C-terminal APE_2200 IPR027473 L-asparaginase, C-terminal APE_2200 IPR020827 Asparaginase/glutaminase, active site 1 APE_2200 IPR006034 Asparaginase/glutaminase-like APE_2200 IPR036152 Asparaginase/glutaminase-like superfamily APE_2200 IPR006033 Type I L-asparaginase family APE_2200 IPR041725 Type I (cytosolic) L-asparaginase APE_2200 IPR027475 Asparaginase/glutaminase, active site 2 APE_2202 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit APE_2202 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic APE_2202 IPR018027 Asn/Gln amidotransferase APE_2202 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like APE_2202 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 APE_2202 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site APE_2202 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain APE_2202 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E APE_2208.1 IPR014155 Type IV secretion system protein VirB11 APE_2208.1 IPR001482 Type II/IV secretion system protein APE_2208.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2213 IPR012675 Beta-grasp domain superfamily APE_2213 IPR036010 2Fe-2S ferredoxin-like superfamily APE_2213 IPR036884 [2Fe-2S]-binding domain superfamily APE_2213 IPR002888 [2Fe-2S]-binding APE_2213 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain APE_2216.1 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APE_2216.1 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily APE_2216.1 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding APE_2216.1 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily APE_2216.1 IPR012780 Carbon-monoxide dehydrogenase, large subunit APE_2219 IPR002346 Molybdopterin dehydrogenase, FAD-binding APE_2219 IPR036318 FAD-binding, type PCMH-like superfamily APE_2219 IPR016166 FAD-binding domain, PCMH-type APE_2219 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily APE_2219 IPR005107 CO dehydrogenase flavoprotein, C-terminal APE_2219 IPR016167 FAD-binding, type PCMH, subdomain 1 APE_2219 IPR016169 FAD-binding, type PCMH, subdomain 2 APE_2220.1 IPR003593 AAA+ ATPase domain APE_2220.1 IPR041445 RuvB, AAA lid domain APE_2220.1 IPR008823 RuvB C-terminal winged helix domain APE_2220.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2220.1 IPR004605 DNA helicase, Holliday junction RuvB-type APE_2220.1 IPR036388 Winged helix-like DNA-binding domain superfamily APE_2220.1 IPR036390 Winged helix DNA-binding domain superfamily APE_2220.1 IPR008824 RuvB-like P-loop domain APE_2227 IPR003777 XdhC- CoxI APE_2227 IPR027051 XdhC Rossmann domain APE_2227 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family APE_2239.1 IPR036291 NAD(P)-binding domain superfamily APE_2239.1 IPR020843 Polyketide synthase, enoylreductase domain APE_2239.1 IPR013149 Alcohol dehydrogenase, C-terminal APE_2239.1 IPR013154 Alcohol dehydrogenase, N-terminal APE_2239.1 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site APE_2239.1 IPR011032 GroES-like superfamily APE_2242.1 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 APE_2242.1 IPR000808 Mrp, conserved site APE_2242.1 IPR019591 Mrp/NBP35 ATP-binding protein APE_2242.1 IPR002744 MIP18 family-like APE_2242.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2242.1 IPR034904 Fe-S cluster assembly domain superfamily APE_2247 IPR003180 Methylpurine-DNA glycosylase APE_2247 IPR036995 Methylpurine-DNA glycosylase superfamily APE_2247 IPR011034 Formyl transferase-like, C-terminal domain superfamily APE_2248.1 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APE_2248.1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_2248.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_2248.1 IPR004839 Aminotransferase, class I/classII APE_2252.1 IPR035906 MetI-like superfamily APE_2252.1 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_2257 IPR030678 Peptide/nickel binding protein, MppA-type APE_2257 IPR039424 Solute-binding protein family 5 APE_2257 IPR023765 Solute-binding protein family 5, conserved site APE_2257 IPR000914 Solute-binding protein family 5 domain APE_2258 IPR035906 MetI-like superfamily APE_2258 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_2260 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APE_2260 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APE_2260 IPR035906 MetI-like superfamily APE_2261.1 IPR017871 ABC transporter, conserved site APE_2261.1 IPR003593 AAA+ ATPase domain APE_2261.1 IPR003439 ABC transporter-like APE_2261.1 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APE_2261.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2263.1 IPR003439 ABC transporter-like APE_2263.1 IPR003593 AAA+ ATPase domain APE_2263.1 IPR017871 ABC transporter, conserved site APE_2263.1 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APE_2263.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2272.1 IPR003593 AAA+ ATPase domain APE_2272.1 IPR003439 ABC transporter-like APE_2272.1 IPR017871 ABC transporter, conserved site APE_2272.1 IPR012693 ABC transporter, phosphonate import, PhnC APE_2272.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2273.1 IPR005746 Thioredoxin APE_2273.1 IPR013766 Thioredoxin domain APE_2273.1 IPR036249 Thioredoxin-like superfamily APE_2273.1 IPR017937 Thioredoxin, conserved site APE_2277.1 IPR001110 Uncharacterised protein family UPF0012, conserved site APE_2277.1 IPR036526 Carbon-nitrogen hydrolase superfamily APE_2277.1 IPR003010 Carbon-nitrogen hydrolase APE_2278 IPR013766 Thioredoxin domain APE_2278 IPR022915 Peroxiredoxin, TDXH subfamily APE_2278 IPR019479 Peroxiredoxin, C-terminal APE_2278 IPR024706 Peroxiredoxin, AhpC-type APE_2278 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APE_2278 IPR036249 Thioredoxin-like superfamily APE_2279.1 IPR020568 Ribosomal protein S5 domain 2-type fold APE_2279.1 IPR004815 Lon protease, bacterial/eukaryotic-type APE_2279.1 IPR008269 Peptidase S16, Lon proteolytic domain APE_2279.1 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_2279.1 IPR003111 Lon, substrate-binding domain APE_2279.1 IPR008268 Peptidase S16, active site APE_2279.1 IPR027065 Lon protease APE_2279.1 IPR003959 ATPase, AAA-type, core APE_2279.1 IPR015947 PUA-like superfamily APE_2279.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2279.1 IPR003593 AAA+ ATPase domain APE_2279.1 IPR027543 Lon protease, bacterial APE_2281.1 IPR011913 RfaE bifunctional protein, domain I APE_2281.1 IPR029056 Ribokinase-like APE_2281.1 IPR011611 Carbohydrate kinase PfkB APE_2281.1 IPR004821 Cytidyltransferase-like domain APE_2281.1 IPR023030 Bifunctional protein HldE APE_2281.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2284.1 IPR025110 AMP-binding enzyme, C-terminal domain APE_2284.1 IPR020845 AMP-binding, conserved site APE_2284.1 IPR000873 AMP-dependent synthetase/ligase APE_2284.1 IPR042099 AMP-dependent synthetase-like superfamily APE_2286 IPR026260 Threonine synthase, bacterial/archaeal APE_2286 IPR004450 Threonine synthase-like APE_2286 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site APE_2286 IPR001926 Pyridoxal-phosphate dependent enzyme APE_2286 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APE_2290.1 IPR011042 Six-bladed beta-propeller, TolB-like APE_2290.1 IPR011659 WD40-like Beta Propeller APE_2290.1 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain APE_2290.1 IPR029058 Alpha/Beta hydrolase fold APE_2291 IPR013446 Glucose-1-phosphate cytidylyltransferase APE_2291 IPR005835 Nucleotidyl transferase domain APE_2291 IPR029044 Nucleotide-diphospho-sugar transferases APE_2296 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily APE_2296 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily APE_2296 IPR018214 Glutamyl-tRNA reductase, conserved site APE_2296 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal APE_2296 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain APE_2296 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase APE_2296 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APE_2296 IPR036291 NAD(P)-binding domain superfamily APE_2298.1 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily APE_2298.1 IPR022418 Porphobilinogen deaminase, C-terminal APE_2298.1 IPR022417 Porphobilinogen deaminase, N-terminal APE_2298.1 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site APE_2298.1 IPR000860 Porphobilinogen deaminase APE_2299.1 IPR005814 Aminotransferase class-III APE_2299.1 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase APE_2299.1 IPR015424 Pyridoxal phosphate-dependent transferase APE_2299.1 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APE_2299.1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_2300.1 IPR030656 Delta-aminolevulinic acid dehydratase, active site APE_2300.1 IPR001731 Delta-aminolevulinic acid dehydratase APE_2300.1 IPR013785 Aldolase-type TIM barrel APE_2302.1 IPR022917 Phenylalanine-tRNA ligase alpha subunit, bacterial/archaeal APE_2302.1 IPR006195 Aminoacyl-tRNA synthetase, class II APE_2302.1 IPR002319 Phenylalanyl-tRNA synthetase APE_2302.1 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit APE_2305 IPR004531 Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic APE_2305 IPR005147 tRNA synthetase, B5-domain APE_2305 IPR040659 Phenylalanine--tRNA ligase beta subunit, B1 domain APE_2305 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain APE_2305 IPR022918 Phenylalanine-tRNA ligase beta chain 2, bacterial/archaeal APE_2305 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APE_2305 IPR009061 Putative DNA-binding domain superfamily APE_2305 IPR005146 B3/B4 tRNA-binding domain APE_2308 IPR003801 GTP cyclohydrolase FolE2/MptA APE_2308 IPR022838 GTP cyclohydrolase FolE2 APE_2316 IPR006316 Tryptophan synthase, beta chain-like APE_2316 IPR006654 Tryptophan synthase, beta chain APE_2316 IPR023026 Tryptophan synthase beta chain/beta chain-like APE_2316 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APE_2316 IPR001926 Pyridoxal-phosphate dependent enzyme APE_2316 IPR006653 Tryptophan synthase, beta chain, conserved site APE_2317.1 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain APE_2317.1 IPR000924 Glutamyl/glutaminyl-tRNA synthetase APE_2317.1 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial APE_2317.1 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APE_2317.1 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 APE_2317.1 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding APE_2317.1 IPR033910 Glutamyl-tRNA synthetase APE_2317.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2328 IPR036621 Anticodon-binding domain superfamily APE_2328 IPR004154 Anticodon-binding APE_2328 IPR006195 Aminoacyl-tRNA synthetase, class II APE_2328 IPR033721 Prolyl-tRNA synthetase, catalytic domain APE_2328 IPR017449 Prolyl-tRNA synthetase, class II APE_2328 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) APE_2328 IPR016061 Proline-tRNA ligase, class II, C-terminal APE_2328 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type APE_2328 IPR002316 Proline-tRNA ligase, class IIa APE_2341 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain APE_2341 IPR019491 Lipoate protein ligase, C-terminal APE_2341 IPR004562 Lipoyltransferase/lipoate-protein ligase APE_2342.1 IPR024898 Octanoyltransferase LipM APE_2342.1 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain APE_2344.1 IPR007197 Radical SAM APE_2344.1 IPR003698 Lipoyl synthase APE_2344.1 IPR031691 Lipoyl synthase, N-terminal APE_2344.1 IPR006638 Elp3/MiaB/NifB APE_2344.1 IPR013785 Aldolase-type TIM barrel APE_2347.1 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APE_2347.1 IPR000089 Biotin/lipoyl attachment APE_2347.1 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily APE_2347.1 IPR036625 E3-binding domain superfamily APE_2347.1 IPR004167 Peripheral subunit-binding domain APE_2347.1 IPR011053 Single hybrid motif APE_2347.1 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain APE_2348 IPR011060 Ribulose-phosphate binding barrel APE_2348 IPR001754 Orotidine 5'-phosphate decarboxylase domain APE_2348 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 APE_2348 IPR013785 Aldolase-type TIM barrel APE_2349.1 IPR029057 Phosphoribosyltransferase-like APE_2349.1 IPR004467 Orotate phosphoribosyl transferase domain APE_2349.1 IPR000836 Phosphoribosyltransferase domain APE_2349.1 IPR023031 Orotate phosphoribosyltransferase APE_2350.1 IPR019916 Isochorismatase, RutB APE_2350.1 IPR036380 Isochorismatase-like superfamily APE_2350.1 IPR000868 Isochorismatase-like APE_2354 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APE_2354 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APE_2354 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APE_2354 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APE_2354 IPR006089 Acyl-CoA dehydrogenase, conserved site APE_2354 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APE_2354 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APE_2362.1 IPR017953 Carbohydrate kinase, predicted, conserved site APE_2362.1 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr APE_2362.1 IPR029056 Ribokinase-like APE_2362.1 IPR004443 YjeF N-terminal domain APE_2362.1 IPR036652 YjeF N-terminal domain superfamily APE_2362.1 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase APE_2366.1 IPR015189 Translation elongation factor SelB, winged helix, type 1 APE_2366.1 IPR004161 Translation elongation factor EFTu-like, domain 2 APE_2366.1 IPR015190 Translation elongation factor SelB, winged helix, type 2 APE_2366.1 IPR036388 Winged helix-like DNA-binding domain superfamily APE_2366.1 IPR004535 Translation elongation factor, selenocysteine-specific APE_2366.1 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APE_2366.1 IPR036390 Winged helix DNA-binding domain superfamily APE_2366.1 IPR000795 Transcription factor, GTP-binding domain APE_2366.1 IPR005225 Small GTP-binding protein domain APE_2366.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2366.1 IPR015191 Translation elongation factor SelB, winged helix, type 3 APE_2366.1 IPR009000 Translation protein, beta-barrel domain superfamily APE_2374 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2374 IPR009000 Translation protein, beta-barrel domain superfamily APE_2374 IPR036925 Translation initiation factor IF-2, domain 3 superfamily APE_2374 IPR023115 Translation initiation factor IF- 2, domain 3 APE_2374 IPR015760 Translation initiation factor IF- 2 APE_2374 IPR000178 Translation initiation factor aIF-2, bacterial-like APE_2374 IPR000795 Transcription factor, GTP-binding domain APE_2374 IPR006847 Translation initiation factor IF-2, N-terminal APE_2374 IPR005225 Small GTP-binding protein domain APE_2377 IPR001564 Nucleoside diphosphate kinase APE_2377 IPR034907 Nucleoside diphosphate kinase-like domain APE_2377 IPR036850 Nucleoside diphosphate kinase-like domain superfamily APE_2377 IPR023005 Nucleoside diphosphate kinase, active site APE_2381.1 IPR006160 Short chain fatty acid transporter AtoE APE_2381.1 IPR006161 Conserved hypothetical protein CHP00336 APE_2392.1 IPR032672 TmcA/NAT10/Kre33 APE_2392.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2392.1 IPR007807 Helicase domain APE_2392.1 IPR000182 GNAT domain APE_2392.1 IPR016181 Acyl-CoA N-acyltransferase APE_2392.1 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain APE_2392.1 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA APE_2392.1 IPR038321 TmcA, C-terminal domain superfamily APE_2392.1 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal APE_2397 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily APE_2397 IPR005145 Putative GTP-binding controlling metal-binding domain APE_2397 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily APE_2397 IPR006070 YrdC-like domain APE_2397 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 APE_2400.1 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase APE_2400.1 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase APE_2400.1 IPR029056 Ribokinase-like APE_2406.1 IPR003439 ABC transporter-like APE_2406.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2406.1 IPR003593 AAA+ ATPase domain APE_2408.1 IPR003593 AAA+ ATPase domain APE_2408.1 IPR003439 ABC transporter-like APE_2408.1 IPR017871 ABC transporter, conserved site APE_2408.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2414.1 IPR002528 Multi antimicrobial extrusion protein APE_2418.1 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2418.1 IPR012255 Electron transfer flavoprotein, beta subunit APE_2418.1 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal APE_2418.1 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site APE_2418.1 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal APE_2419 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2419 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal APE_2419 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site APE_2419 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal APE_2419 IPR001308 Electron transfer flavoprotein alpha subunit/FixB APE_2419 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal APE_2419 IPR029035 DHS-like NAD/FAD-binding domain superfamily APE_2421 IPR039651 Protein FixC-like APE_2421 IPR036188 FAD/NAD(P)-binding domain superfamily APE_2421 IPR002938 FAD-binding domain APE_2423 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APE_2423 IPR015424 Pyridoxal phosphate-dependent transferase APE_2423 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase APE_2423 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_2423 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APE_2423 IPR000192 Aminotransferase class V domain APE_2433.1 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily APE_2433.1 IPR005843 Alpha-D-phosphohexomutase, C-terminal APE_2433.1 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III APE_2433.1 IPR006352 Phosphoglucosamine mutase, bacterial type APE_2433.1 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III APE_2433.1 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I APE_2433.1 IPR016066 Alpha-D-phosphohexomutase, conserved site APE_2433.1 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II APE_2433.1 IPR005841 Alpha-D-phosphohexomutase superfamily APE_2437.1 IPR013785 Aldolase-type TIM barrel APE_2437.1 IPR028581 Deoxyribose-phosphate aldolase type I APE_2437.1 IPR002915 DeoC/FbaB/ lacD aldolase APE_2437.1 IPR011343 Deoxyribose-phosphate aldolase APE_2439 IPR019539 Galactokinase galactose-binding domain APE_2439 IPR019741 Galactokinase, conserved site APE_2439 IPR022963 Galactokinase, bacterial APE_2439 IPR020568 Ribosomal protein S5 domain 2-type fold APE_2439 IPR000705 Galactokinase APE_2439 IPR006206 Mevalonate/galactokinase APE_2439 IPR013750 GHMP kinase, C-terminal domain APE_2439 IPR036554 GHMP kinase, C-terminal domain superfamily APE_2439 IPR006204 GHMP kinase N-terminal domain APE_2439 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APE_2439 IPR006203 GHMP kinase, ATP-binding, conserved site APE_2441.1 IPR011659 WD40-like Beta Propeller APE_2441.1 IPR029058 Alpha/Beta hydrolase fold APE_2441.1 IPR011042 Six-bladed beta-propeller, TolB-like APE_2441.1 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain APE_2446 IPR007841 Uncharacterised protein family UPF0210 APE_2450.1 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal APE_2450.1 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B APE_2450.1 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal APE_2450.1 IPR023042 Peptidase M17, leucine aminopeptidase APE_2452 IPR029062 Class I glutamine amidotransferase-like APE_2452 IPR017926 Glutamine amidotransferase APE_2452 IPR001674 GMP synthase, C-terminal APE_2452 IPR004739 GMP synthase, glutamine amidotransferase APE_2452 IPR022955 GMP synthase APE_2452 IPR025777 GMP synthetase ATP pyrophosphatase domain APE_2452 IPR022310 NAD/GMP synthase APE_2452 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APE_2458 IPR000941 Enolase APE_2458 IPR036849 Enolase-like, C-terminal domain superfamily APE_2458 IPR029017 Enolase-like, N-terminal APE_2458 IPR020810 Enolase, C-terminal TIM barrel domain APE_2458 IPR020809 Enolase, conserved site APE_2458 IPR020811 Enolase, N-terminal APE_2464.1 IPR002716 PIN domain APE_2464.1 IPR029060 PIN-like domain superfamily APE_2464.1 IPR003714 PhoH-like protein APE_2464.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2465.1 IPR004573 rRNA small subunit methyltransferase B APE_2465.1 IPR006027 NusB/RsmB/TIM44 APE_2465.1 IPR023267 RNA (C5-cytosine) methyltransferase APE_2465.1 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site APE_2465.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_2465.1 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae APE_2465.1 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type APE_2465.1 IPR035926 NusB-like superfamily APE_2468.1 IPR014388 3-oxoacid CoA-transferase APE_2468.1 IPR004165 Coenzyme A transferase family I APE_2468.1 IPR037171 NagB/RpiA transferase-like APE_2474.1 IPR011546 Peptidase M41, FtsH extracellular APE_2474.1 IPR003960 ATPase, AAA-type, conserved site APE_2474.1 IPR003593 AAA+ ATPase domain APE_2474.1 IPR041569 AAA ATPase, AAA+ lid domain APE_2474.1 IPR005936 Peptidase, FtsH APE_2474.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2474.1 IPR037219 Peptidase M41-like APE_2474.1 IPR000642 Peptidase M41 APE_2474.1 IPR003959 ATPase, AAA-type, core APE_2486.1 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APE_2486.1 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 APE_2489.1 IPR000644 CBS domain APE_2489.1 IPR001347 Sugar isomerase (SIS) APE_2489.1 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type APE_2489.1 IPR035474 KpsF-like, SIS domain APE_2495.1 IPR036265 HIT-like superfamily APE_2495.1 IPR011146 HIT-like domain APE_2495.1 IPR001310 Histidine triad (HIT) protein APE_2495.1 IPR019808 Histidine triad, conserved site APE_2495.1 IPR039384 HINT family APE_2497 IPR002771 Multiple antibiotic resistance (MarC)-related APE_2503.1 IPR020904 Short-chain dehydrogenase/reductase, conserved site APE_2503.1 IPR002347 Short-chain dehydrogenase/reductase SDR APE_2503.1 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase APE_2503.1 IPR036291 NAD(P)-binding domain superfamily APE_2507.1 IPR002912 ACT domain APE_2507.1 IPR006236 D-3-phosphoglycerate dehydrogenase APE_2507.1 IPR036291 NAD(P)-binding domain superfamily APE_2507.1 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APE_2507.1 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APE_2507.1 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APE_2507.1 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APE_2507.1 IPR029009 Allosteric substrate binding domain superfamily APE_2509 IPR000399 TPP-binding enzyme, conserved site APE_2509 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain APE_2509 IPR012000 Thiamine pyrophosphate enzyme, central domain APE_2509 IPR029061 Thiamin diphosphate-binding fold APE_2509 IPR029035 DHS-like NAD/FAD-binding domain superfamily APE_2509 IPR039368 Acetolactate synthase large subunit, TPP binding domain APE_2509 IPR012846 Acetolactate synthase, large subunit, biosynthetic APE_2509 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding APE_2516 IPR003439 ABC transporter-like APE_2516 IPR017871 ABC transporter, conserved site APE_2516 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA APE_2516 IPR025302 Domain of unknown function DUF4162 APE_2516 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2516 IPR003593 AAA+ ATPase domain APE_2520.1 IPR026286 Maleate isomerase/Arylmalonate decarboxylase APE_2520.1 IPR028615 Maleate isomerase APE_2521.1 IPR028081 Leucine-binding protein domain APE_2521.1 IPR000709 Leu/Ile/Val-binding protein APE_2521.1 IPR028082 Periplasmic binding protein-like I APE_2522.1 IPR001851 ABC transporter, permease APE_2524.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2524.1 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APE_2524.1 IPR003439 ABC transporter-like APE_2524.1 IPR003593 AAA+ ATPase domain APE_2524.1 IPR017871 ABC transporter, conserved site APE_2526 IPR017871 ABC transporter, conserved site APE_2526 IPR003439 ABC transporter-like APE_2526 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APE_2526 IPR003593 AAA+ ATPase domain APE_2526 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2528.1 IPR002821 Hydantoinase A/oxoprolinase APE_2528.1 IPR008040 Hydantoinaseoxoprolinase, N-terminal APE_2533.1 IPR036249 Thioredoxin-like superfamily APE_2533.1 IPR024705 Spermatogenesis-associated protein 20 APE_2533.1 IPR004879 Domain of unknown function DUF255 APE_2533.1 IPR012341 Six-hairpin glycosidase-like superfamily APE_2533.1 IPR008928 Six-hairpin glycosidase superfamily APE_2538 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal APE_2540.1 IPR006195 Aminoacyl-tRNA synthetase, class II APE_2540.1 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) APE_2540.1 IPR004154 Anticodon-binding APE_2540.1 IPR036621 Anticodon-binding domain superfamily APE_2540.1 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily APE_2540.1 IPR033730 Prokaryote proline-tRNA ligase core domain APE_2540.1 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 APE_2540.1 IPR002316 Proline-tRNA ligase, class IIa APE_2540.1 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type APE_2540.1 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain APE_2546 IPR013785 Aldolase-type TIM barrel APE_2546 IPR013798 Indole-3-glycerol phosphate synthase APE_2546 IPR001468 Indole-3-glycerol phosphate synthase, conserved site APE_2546 IPR011060 Ribulose-phosphate binding barrel APE_2548 IPR023026 Tryptophan synthase beta chain/beta chain-like APE_2548 IPR006653 Tryptophan synthase, beta chain, conserved site APE_2548 IPR006316 Tryptophan synthase, beta chain-like APE_2548 IPR006654 Tryptophan synthase, beta chain APE_2548 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APE_2548 IPR001926 Pyridoxal-phosphate dependent enzyme APE_2550 IPR002028 Tryptophan synthase, alpha chain APE_2550 IPR018204 Tryptophan synthase, alpha chain, active site APE_2550 IPR011060 Ribulose-phosphate binding barrel APE_2550 IPR013785 Aldolase-type TIM barrel APE_2551 IPR005940 Anthranilate phosphoribosyl transferase APE_2551 IPR017459 Glycosyl transferase family 3, N-terminal domain APE_2551 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily APE_2551 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily APE_2551 IPR000312 Glycosyl transferase, family 3 APE_2553.1 IPR005801 ADC synthase APE_2553.1 IPR019999 Anthranilate synthase component I-like APE_2553.1 IPR006805 Anthranilate synthase component I, N-terminal APE_2553.1 IPR015890 Chorismate-utilising enzyme, C-terminal APE_2555 IPR005940 Anthranilate phosphoribosyl transferase APE_2555 IPR029062 Class I glutamine amidotransferase-like APE_2555 IPR017926 Glutamine amidotransferase APE_2555 IPR000312 Glycosyl transferase, family 3 APE_2555 IPR017459 Glycosyl transferase family 3, N-terminal domain APE_2555 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily APE_2555 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily APE_2555 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain APE_2556.1 IPR006656 Molybdopterin oxidoreductase APE_2556.1 IPR041632 Arsenite oxidase subunit AioA, 3Fe-4S cluster APE_2556.1 IPR006657 Molybdopterin dinucleotide-binding domain APE_2556.1 IPR009010 Aspartate decarboxylase-like domain superfamily APE_2556.1 IPR014066 Arsenite oxidase, large subunit APE_2563 IPR014349 Rieske iron-sulphur protein APE_2563 IPR005805 Rieske iron-sulphur protein, C-terminal APE_2563 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily APE_2563 IPR014067 Arsenite oxidase, small subunit APE_2563 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APE_2563 IPR006311 Twin-arginine translocation pathway, signal sequence APE_2563 IPR017941 Rieske [2Fe-2S] iron-sulphur domain APE_2571.1 IPR001757 P-type ATPase APE_2571.1 IPR027256 P-type ATPase, subfamily IB APE_2571.1 IPR023214 HAD superfamily APE_2571.1 IPR036412 HAD-like superfamily APE_2571.1 IPR008250 P-type ATPase, A domain superfamily APE_2571.1 IPR023298 P-type ATPase, transmembrane domain superfamily APE_2571.1 IPR018303 P-type ATPase, phosphorylation site APE_2571.1 IPR023299 P-type ATPase, cytoplasmic domain N APE_2575 IPR004839 Aminotransferase, class I/classII APE_2575 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APE_2575 IPR005861 Histidinol-phosphate aminotransferase family APE_2575 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APE_2575 IPR015424 Pyridoxal phosphate-dependent transferase APE_2579.1 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2579.1 IPR017871 ABC transporter, conserved site APE_2579.1 IPR003439 ABC transporter-like APE_2579.1 IPR003593 AAA+ ATPase domain APE_2579.1 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA APE_2580 IPR012349 FMN-binding split barrel APE_2580 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APE_2580 IPR001279 Metallo-beta-lactamase APE_2580 IPR029039 Flavoprotein-like superfamily APE_2580 IPR002563 Flavin reductase like domain APE_2580 IPR008254 Flavodoxin/nitric oxide synthase APE_2581 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain APE_2581 IPR024898 Octanoyltransferase LipM APE_2583.1 IPR018107 Sodium:dicarboxylate symporter, conserved site APE_2583.1 IPR036458 Sodium:dicarboxylate symporter superfamily APE_2583.1 IPR001991 Sodium:dicarboxylate symporter APE_2583.1 IPR033380 Glutamate-aspartate symport protein GltP/GltT APE_2586.1 IPR001851 ABC transporter, permease APE_2587.1 IPR001851 ABC transporter, permease APE_2588 IPR003593 AAA+ ATPase domain APE_2588 IPR015861 ABC transporter, ribose import, RbsA APE_2588 IPR003439 ABC transporter-like APE_2588 IPR027417 P-loop containing nucleoside triphosphate hydrolase APE_2588 IPR017871 ABC transporter, conserved site APE_2595.1 IPR001763 Rhodanese-like domain APE_2595.1 IPR036873 Rhodanese-like domain superfamily APE_2595.1 IPR001307 Thiosulphate sulfurtransferase, conserved site APE_2598 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site APE_2598 IPR013785 Aldolase-type TIM barrel APE_2598 IPR006638 Elp3/MiaB/NifB APE_2598 IPR010505 Molybdenum cofactor synthesis C-terminal APE_2598 IPR013483 Molybdenum cofactor biosynthesis protein A APE_2598 IPR007197 Radical SAM APE_2601.1 IPR003876 Arginine deiminase APE_2604 IPR042099 AMP-dependent synthetase-like superfamily APE_2604 IPR000873 AMP-dependent synthetase/ligase APE_2604 IPR020845 AMP-binding, conserved site APE_2604 IPR025110 AMP-binding enzyme, C-terminal domain APE_2604 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain APE_2604 IPR011904 Acetate-CoA ligase APE_2604a.1 IPR042099 AMP-dependent synthetase-like superfamily APE_2604a.1 IPR025110 AMP-binding enzyme, C-terminal domain APE_2604a.1 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain APE_2604a.1 IPR011904 Acetate-CoA ligase APE_2604a.1 IPR000873 AMP-dependent synthetase/ligase APE_2604a.1 IPR020845 AMP-binding, conserved site APE_2605.1 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APE_2605.1 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APE_2605.1 IPR006311 Twin-arginine translocation pathway, signal sequence APE_2610 IPR037946 Tetrathionate reductase subunit A, MopB domain APE_2610 IPR009010 Aspartate decarboxylase-like domain superfamily APE_2610 IPR006657 Molybdopterin dinucleotide-binding domain APE_2610 IPR006656 Molybdopterin oxidoreductase APE_2610 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain APE_2610 IPR041929 Tetrathionate reductase subunit A, N-terminal APE_2615.1 IPR011701 Major facilitator superfamily APE_2615.1 IPR036259 MFS transporter superfamily