locus-tag class description LIN97_RS00005 PF00308 Bacterial dnaA protein LIN97_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix LIN97_RS00005 PF11638 DnaA N-terminal domain LIN97_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LIN97_RS00010 PF02767 DNA polymerase III beta subunit, central domain LIN97_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LIN97_RS00015 PF02463 RecF/RecN/SMC N terminal domain LIN97_RS00020 PF13649 Methyltransferase domain LIN97_RS00025 PF00080 Copper/zinc superoxide dismutase (SODC) LIN97_RS00035 PF13333 Integrase core domain LIN97_RS00035 PF13276 HTH-like domain LIN97_RS00035 PF00665 Integrase core domain LIN97_RS00045 PF00390 Malic enzyme, N-terminal domain LIN97_RS00045 PF03949 Malic enzyme, NAD binding domain LIN97_RS00055 PF03918 Cytochrome C biogenesis protein LIN97_RS00060 PF08534 Redoxin LIN97_RS00065 PF01578 Cytochrome C assembly protein LIN97_RS00065 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LIN97_RS00070 PF03916 Polysulphide reductase, NrfD LIN97_RS00075 PF13247 4Fe-4S dicluster domain LIN97_RS00085 PF02335 Cytochrome c552 LIN97_RS00100 PF03918 Cytochrome C biogenesis protein LIN97_RS00105 PF03918 Cytochrome C biogenesis protein LIN97_RS00110 PF08534 Redoxin LIN97_RS00115 PF01578 Cytochrome C assembly protein LIN97_RS00115 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LIN97_RS00120 PF03100 CcmE LIN97_RS00125 PF04995 Heme exporter protein D (CcmD) LIN97_RS00130 PF01578 Cytochrome C assembly protein LIN97_RS00135 PF03379 CcmB protein LIN97_RS00140 PF00005 ABC transporter LIN97_RS00185 PF07690 Major Facilitator Superfamily LIN97_RS00190 PF00849 RNA pseudouridylate synthase LIN97_RS00190 PF01479 S4 domain LIN97_RS00195 PF00390 Malic enzyme, N-terminal domain LIN97_RS00195 PF03949 Malic enzyme, NAD binding domain LIN97_RS00195 PF01515 Phosphate acetyl/butaryl transferase LIN97_RS00200 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LIN97_RS00200 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LIN97_RS00210 PF04228 Putative neutral zinc metallopeptidase LIN97_RS00215 PF01476 LysM domain LIN97_RS00220 PF02660 Glycerol-3-phosphate acyltransferase LIN97_RS00225 PF02152 Dihydroneopterin aldolase LIN97_RS00230 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIN97_RS00230 PF01464 Transglycosylase SLT domain LIN97_RS00240 PF02600 Disulfide bond formation protein DsbB LIN97_RS00245 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LIN97_RS00250 PF00392 Bacterial regulatory proteins, gntR family LIN97_RS00250 PF07840 FadR C-terminal domain LIN97_RS00255 PF00155 Aminotransferase class I and II LIN97_RS00260 PF00425 chorismate binding enzyme LIN97_RS00265 PF16582 Middle domain of thiamine pyrophosphate LIN97_RS00265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LIN97_RS00265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIN97_RS00270 PF00561 alpha/beta hydrolase fold LIN97_RS00275 PF00312 Ribosomal protein S15 LIN97_RS00280 PF02772 S-adenosylmethionine synthetase, central domain LIN97_RS00280 PF00438 S-adenosylmethionine synthetase, N-terminal domain LIN97_RS00280 PF02773 S-adenosylmethionine synthetase, C-terminal domain LIN97_RS00285 PF17283 SprT-like zinc ribbon domain LIN97_RS00285 PF10263 SprT-like family LIN97_RS00290 PF03222 Tryptophan/tyrosine permease family LIN97_RS00295 PF03315 Serine dehydratase beta chain LIN97_RS00295 PF03313 Serine dehydratase alpha chain LIN97_RS00300 PF17763 Glutaminase/Asparaginase C-terminal domain LIN97_RS00300 PF00710 Asparaginase, N-terminal LIN97_RS00305 PF04055 Radical SAM superfamily LIN97_RS00315 PF13464 Domain of unknown function (DUF4115) LIN97_RS00320 PF04551 GcpE protein LIN97_RS00325 PF13393 Histidyl-tRNA synthetase LIN97_RS00325 PF03129 Anticodon binding domain LIN97_RS00330 PF09976 Tetratricopeptide repeat-like domain LIN97_RS00335 PF04191 Phospholipid methyltransferase LIN97_RS00340 PF00308 Bacterial dnaA protein LIN97_RS00345 PF00860 Permease family LIN97_RS00355 PF13145 PPIC-type PPIASE domain LIN97_RS00360 PF02655 ATP-grasp domain LIN97_RS00360 PF18419 ATP-grasp-like domain LIN97_RS00360 PF04262 Glutamate-cysteine ligase LIN97_RS00365 PF00884 Sulfatase LIN97_RS00370 PF00574 Clp protease LIN97_RS00375 PF07724 AAA domain (Cdc48 subfamily) LIN97_RS00375 PF06689 ClpX C4-type zinc finger LIN97_RS00375 PF10431 C-terminal, D2-small domain, of ClpB protein LIN97_RS00390 PF05675 Protein of unknown function (DUF817) LIN97_RS00395 PF00403 Heavy-metal-associated domain LIN97_RS00400 PF00403 Heavy-metal-associated domain LIN97_RS00405 PF00376 MerR family regulatory protein LIN97_RS00405 PF09278 MerR, DNA binding LIN97_RS00425 PF01980 tRNA-methyltransferase O LIN97_RS00425 PF18389 TrmO C-terminal domain LIN97_RS00430 PF01040 UbiA prenyltransferase family LIN97_RS00435 PF03737 Aldolase/RraA LIN97_RS00440 PF00939 Sodium:sulfate symporter transmembrane region LIN97_RS00445 PF04751 Protein of unknown function (DUF615) LIN97_RS00450 PF01523 Putative modulator of DNA gyrase LIN97_RS00455 PF00156 Phosphoribosyl transferase domain LIN97_RS00460 PF02595 Glycerate kinase family LIN97_RS00465 PF02447 GntP family permease LIN97_RS00470 PF05651 Putative sugar diacid recognition LIN97_RS00470 PF17853 GGDEF-like domain LIN97_RS00470 PF13556 PucR C-terminal helix-turn-helix domain LIN97_RS00480 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LIN97_RS00480 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LIN97_RS00485 PF03880 DbpA RNA binding domain LIN97_RS00485 PF00270 DEAD/DEAH box helicase LIN97_RS00485 PF00271 Helicase conserved C-terminal domain LIN97_RS00495 PF00013 KH domain LIN97_RS00495 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LIN97_RS00495 PF01138 3' exoribonuclease family, domain 1 LIN97_RS00495 PF03725 3' exoribonuclease family, domain 2 LIN97_RS00495 PF00575 S1 RNA binding domain LIN97_RS00500 PF04074 YhcH/YjgK/YiaL LIN97_RS00505 PF01510 N-acetylmuramoyl-L-alanine amidase LIN97_RS00510 PF07963 Prokaryotic N-terminal methylation motif LIN97_RS00515 PF00437 Type II/IV secretion system protein LIN97_RS00515 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LIN97_RS00520 PF00482 Type II secretion system (T2SS), protein F LIN97_RS00530 PF01121 Dephospho-CoA kinase LIN97_RS00535 PF03884 DNA gyrase inhibitor YacG LIN97_RS00545 PF01235 Sodium:alanine symporter family LIN97_RS00550 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LIN97_RS00555 PF17311 Family of unknown function (DUF5358) LIN97_RS00560 PF02954 Bacterial regulatory protein, Fis family LIN97_RS00575 PF02661 Fic/DOC family LIN97_RS00580 PF00474 Sodium:solute symporter family LIN97_RS00585 PF06196 Protein of unknown function (DUF997) LIN97_RS00590 PF04575 Protein of unknown function (DUF560) LIN97_RS00595 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B LIN97_RS00595 PF17483 C-lobe handle domain of Tf-binding protein B LIN97_RS00595 PF17484 N-Lobe handle Tf-binding protein B LIN97_RS00605 PF02785 Biotin carboxylase C-terminal domain LIN97_RS00605 PF00289 Biotin carboxylase, N-terminal domain LIN97_RS00605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIN97_RS00610 PF00364 Biotin-requiring enzyme LIN97_RS00615 PF01220 Dehydroquinase class II LIN97_RS00620 PF13378 Enolase C-terminal domain-like LIN97_RS00635 PF00378 Enoyl-CoA hydratase/isomerase LIN97_RS00640 PF00121 Triosephosphate isomerase LIN97_RS00650 PF06969 HemN C-terminal domain LIN97_RS00650 PF04055 Radical SAM superfamily LIN97_RS00655 PF10675 Protein of unknown function (DUF2489) LIN97_RS00660 PF04220 Der GTPase activator (YihI) LIN97_RS00665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LIN97_RS00670 PF00303 Thymidylate synthase LIN97_RS00675 PF01790 Prolipoprotein diacylglyceryl transferase LIN97_RS00680 PF01925 Sulfite exporter TauE/SafE LIN97_RS00685 PF00293 NUDIX domain LIN97_RS00690 PF05025 RbsD / FucU transport protein family LIN97_RS00695 PF00005 ABC transporter LIN97_RS00705 PF13407 Periplasmic binding protein domain LIN97_RS00710 PF00294 pfkB family carbohydrate kinase LIN97_RS00715 PF00313 'Cold-shock' DNA-binding domain LIN97_RS00725 PF00749 tRNA synthetases class I (E and Q), catalytic domain LIN97_RS00745 PF04488 Glycosyltransferase sugar-binding region containing DXD motif LIN97_RS00750 PF14698 Argininosuccinate lyase C-terminal LIN97_RS00750 PF00206 Lyase LIN97_RS00755 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LIN97_RS00755 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LIN97_RS00760 PF06628 Catalase-related immune-responsive LIN97_RS00760 PF00199 Catalase LIN97_RS00770 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LIN97_RS00770 PF14579 Helix-hairpin-helix motif LIN97_RS00770 PF02811 PHP domain LIN97_RS00770 PF01336 OB-fold nucleic acid binding domain LIN97_RS00770 PF07733 Bacterial DNA polymerase III alpha NTPase domain LIN97_RS00775 PF00501 AMP-binding enzyme LIN97_RS00780 PF03895 YadA-like membrane anchor domain LIN97_RS00780 PF05658 Head domain of trimeric autotransporter adhesin LIN97_RS00780 PF05662 Coiled stalk of trimeric autotransporter adhesin LIN97_RS00780 PF13018 Extended Signal Peptide of Type V secretion system LIN97_RS00785 PF13597 Anaerobic ribonucleoside-triphosphate reductase LIN97_RS00785 PF03477 ATP cone domain LIN97_RS00795 PF01026 TatD related DNase LIN97_RS00810 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LIN97_RS00815 PF09190 DALR domain LIN97_RS00815 PF01406 tRNA synthetases class I (C) catalytic domain LIN97_RS00820 PF04055 Radical SAM superfamily LIN97_RS00820 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LIN97_RS00825 PF03099 Biotin/lipoate A/B protein ligase family LIN97_RS00830 PF04359 Protein of unknown function (DUF493) LIN97_RS00835 PF00768 D-alanyl-D-alanine carboxypeptidase LIN97_RS00835 PF07943 Penicillin-binding protein 5, C-terminal domain LIN97_RS00840 PF05036 Sporulation related domain LIN97_RS00840 PF03330 Lytic transglycolase LIN97_RS00845 PF01098 Cell cycle protein LIN97_RS00850 PF00905 Penicillin binding protein transpeptidase domain LIN97_RS00850 PF03717 Penicillin-binding Protein dimerisation domain LIN97_RS00855 PF02590 Predicted SPOUT methyltransferase LIN97_RS00865 PF00271 Helicase conserved C-terminal domain LIN97_RS00865 PF00270 DEAD/DEAH box helicase LIN97_RS00870 PF07497 Rho termination factor, RNA-binding domain LIN97_RS00870 PF07498 Rho termination factor, N-terminal domain LIN97_RS00870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LIN97_RS00880 PF00550 Phosphopantetheine attachment site LIN97_RS00890 PF00698 Acyl transferase domain LIN97_RS00895 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LIN97_RS00895 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LIN97_RS00900 PF02504 Fatty acid synthesis protein LIN97_RS00905 PF01783 Ribosomal L32p protein family LIN97_RS00910 PF02620 Large ribosomal RNA subunit accumulation protein YceD LIN97_RS00920 PF08241 Methyltransferase domain LIN97_RS00925 PF04301 Protein of unknown function (DUF452) LIN97_RS00930 PF00155 Aminotransferase class I and II LIN97_RS00935 PF00202 Aminotransferase class-III LIN97_RS00940 PF02666 Phosphatidylserine decarboxylase LIN97_RS00945 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LIN97_RS00945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LIN97_RS00955 PF06738 Putative threonine/serine exporter LIN97_RS00960 PF12821 Threonine/Serine exporter, ThrE LIN97_RS00960 PF06738 Putative threonine/serine exporter LIN97_RS00965 PF00186 Dihydrofolate reductase LIN97_RS00970 PF01595 Cyclin M transmembrane N-terminal domain LIN97_RS00970 PF03471 Transporter associated domain LIN97_RS00970 PF00571 CBS domain LIN97_RS00975 PF07509 Protein of unknown function (DUF1523) LIN97_RS00980 PF01026 TatD related DNase LIN97_RS00985 PF09115 DNA polymerase III, delta subunit, C terminal LIN97_RS00990 PF02223 Thymidylate kinase LIN97_RS00995 PF02618 YceG-like family LIN97_RS01000 PF00543 Nitrogen regulatory protein P-II LIN97_RS01005 PF08220 DeoR-like helix-turn-helix domain LIN97_RS01005 PF00455 DeoR C terminal sensor domain LIN97_RS01010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LIN97_RS01010 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LIN97_RS01015 PF17042 Nucleotide-binding C-terminal domain LIN97_RS01015 PF07005 Sugar-binding N-terminal domain LIN97_RS01020 PF00596 Class II Aldolase and Adducin N-terminal domain LIN97_RS01025 PF01261 Xylose isomerase-like TIM barrel LIN97_RS01045 PF01624 MutS domain I LIN97_RS01045 PF05188 MutS domain II LIN97_RS01045 PF05192 MutS domain III LIN97_RS01045 PF05190 MutS family domain IV LIN97_RS01045 PF00488 MutS domain V LIN97_RS01055 PF04445 Putative SAM-dependent methyltransferase LIN97_RS01060 PF05958 tRNA (Uracil-5-)-methyltransferase LIN97_RS01065 PF04219 Protein of unknown function, DUF LIN97_RS01070 PF01323 DSBA-like thioredoxin domain LIN97_RS01075 PF06288 Protein of unknown function (DUF1040) LIN97_RS01080 PF12804 MobA-like NTP transferase domain LIN97_RS01090 PF00381 PTS HPr component phosphorylation site LIN97_RS01090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIN97_RS01095 PF00294 pfkB family carbohydrate kinase LIN97_RS01100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIN97_RS01110 PF02525 Flavodoxin-like fold LIN97_RS01125 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LIN97_RS01130 PF00467 KOW motif LIN97_RS01130 PF02357 Transcription termination factor nusG LIN97_RS01135 PF00298 Ribosomal protein L11, RNA binding domain LIN97_RS01135 PF03946 Ribosomal protein L11, N-terminal domain LIN97_RS01140 PF00687 Ribosomal protein L1p/L10e family LIN97_RS01145 PF00466 Ribosomal protein L10 LIN97_RS01150 PF00542 Ribosomal protein L7/L12 C-terminal domain LIN97_RS01150 PF16320 Ribosomal protein L7/L12 dimerisation domain LIN97_RS01155 PF04563 RNA polymerase beta subunit LIN97_RS01155 PF04565 RNA polymerase Rpb2, domain 3 LIN97_RS01155 PF10385 RNA polymerase beta subunit external 1 domain LIN97_RS01155 PF00562 RNA polymerase Rpb2, domain 6 LIN97_RS01155 PF04560 RNA polymerase Rpb2, domain 7 LIN97_RS01155 PF04561 RNA polymerase Rpb2, domain 2 LIN97_RS01160 PF04997 RNA polymerase Rpb1, domain 1 LIN97_RS01160 PF04983 RNA polymerase Rpb1, domain 3 LIN97_RS01160 PF05000 RNA polymerase Rpb1, domain 4 LIN97_RS01160 PF04998 RNA polymerase Rpb1, domain 5 LIN97_RS01160 PF00623 RNA polymerase Rpb1, domain 2 LIN97_RS01170 PF00366 Ribosomal protein S17 LIN97_RS01175 PF00831 Ribosomal L29 protein LIN97_RS01180 PF00252 Ribosomal protein L16p/L10e LIN97_RS01185 PF07650 KH domain LIN97_RS01185 PF00189 Ribosomal protein S3, C-terminal domain LIN97_RS01190 PF00237 Ribosomal protein L22p/L17e LIN97_RS01195 PF00203 Ribosomal protein S19 LIN97_RS01200 PF00181 Ribosomal Proteins L2, RNA binding domain LIN97_RS01200 PF03947 Ribosomal Proteins L2, C-terminal domain LIN97_RS01205 PF00276 Ribosomal protein L23 LIN97_RS01210 PF00573 Ribosomal protein L4/L1 family LIN97_RS01215 PF00297 Ribosomal protein L3 LIN97_RS01220 PF00338 Ribosomal protein S10p/S20e LIN97_RS01225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIN97_RS01225 PF03466 LysR substrate binding domain LIN97_RS01235 PF01144 Coenzyme A transferase LIN97_RS01240 PF02667 Short chain fatty acid transporter LIN97_RS01245 PF02803 Thiolase, C-terminal domain LIN97_RS01245 PF00108 Thiolase, N-terminal domain LIN97_RS01250 PF13404 AsnC-type helix-turn-helix domain LIN97_RS01250 PF01037 Lrp/AsnC ligand binding domain LIN97_RS01255 PF03606 C4-dicarboxylate anaerobic carrier LIN97_RS01260 PF00696 Amino acid kinase family LIN97_RS01265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LIN97_RS01265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LIN97_RS01270 PF00654 Voltage gated chloride channel LIN97_RS01275 PF01207 Dihydrouridine synthase (Dus) LIN97_RS01280 PF03590 Aspartate-ammonia ligase LIN97_RS01285 PF01037 Lrp/AsnC ligand binding domain LIN97_RS01285 PF13404 AsnC-type helix-turn-helix domain LIN97_RS01290 PF01048 Phosphorylase superfamily LIN97_RS01295 PF01594 AI-2E family transporter LIN97_RS01300 PF03960 ArsC family LIN97_RS01305 PF17347 Family of unknown function (DUF5377) LIN97_RS01310 PF03889 Alternative ribosome-rescue factor A LIN97_RS01315 PF18693 TRAM domain LIN97_RS01315 PF00919 Uncharacterized protein family UPF0004 LIN97_RS01315 PF04055 Radical SAM superfamily LIN97_RS01320 PF01451 Low molecular weight phosphotyrosine protein phosphatase LIN97_RS01325 PF04325 Protein of unknown function (DUF465) LIN97_RS01330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LIN97_RS01340 PF06877 Regulator of ribonuclease activity B LIN97_RS01345 PF01741 Large-conductance mechanosensitive channel, MscL LIN97_RS01350 PF02254 TrkA-N domain LIN97_RS01350 PF02080 TrkA-C domain LIN97_RS01355 PF01029 NusB family LIN97_RS01355 PF01189 16S rRNA methyltransferase RsmB/F LIN97_RS01360 PF02911 Formyl transferase, C-terminal domain LIN97_RS01360 PF00551 Formyl transferase LIN97_RS01365 PF01327 Polypeptide deformylase LIN97_RS01395 PF12724 Flavodoxin domain LIN97_RS01400 PF02386 Cation transport protein LIN97_RS01410 PF01206 Sulfurtransferase TusA LIN97_RS01420 PF13521 AAA domain LIN97_RS01420 PF01467 Cytidylyltransferase-like LIN97_RS01425 PF00149 Calcineurin-like phosphoesterase LIN97_RS01430 PF03222 Tryptophan/tyrosine permease family LIN97_RS01440 PF01196 Ribosomal protein L17 LIN97_RS01445 PF01000 RNA polymerase Rpb3/RpoA insert domain LIN97_RS01445 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LIN97_RS01445 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LIN97_RS01450 PF00163 Ribosomal protein S4/S9 N-terminal domain LIN97_RS01450 PF01479 S4 domain LIN97_RS01455 PF00411 Ribosomal protein S11 LIN97_RS01460 PF00416 Ribosomal protein S13/S18 LIN97_RS01465 PF00444 Ribosomal protein L36 LIN97_RS01475 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LIN97_RS01480 PF00327 Ribosomal protein L30p/L7e LIN97_RS01485 PF00333 Ribosomal protein S5, N-terminal domain LIN97_RS01485 PF03719 Ribosomal protein S5, C-terminal domain LIN97_RS01490 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LIN97_RS01495 PF00347 Ribosomal protein L6 LIN97_RS01500 PF00410 Ribosomal protein S8 LIN97_RS01505 PF00253 Ribosomal protein S14p/S29e LIN97_RS01510 PF00281 Ribosomal protein L5 LIN97_RS01510 PF00673 ribosomal L5P family C-terminus LIN97_RS01515 PF00467 KOW motif LIN97_RS01515 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LIN97_RS01520 PF00238 Ribosomal protein L14p/L23e LIN97_RS01530 PF06418 CTP synthase N-terminus LIN97_RS01530 PF00117 Glutamine amidotransferase class-I LIN97_RS01535 PF05525 Branched-chain amino acid transport protein LIN97_RS01545 PF01521 Iron-sulphur cluster biosynthesis LIN97_RS01545 PF01106 NifU-like domain LIN97_RS01550 PF00156 Phosphoribosyl transferase domain LIN97_RS01560 PF01118 Semialdehyde dehydrogenase, NAD binding domain LIN97_RS01560 PF02774 Semialdehyde dehydrogenase, dimerisation domain LIN97_RS01565 PF10531 SLBB domain LIN97_RS01570 PF00004 ATPase family associated with various cellular activities (AAA) LIN97_RS01570 PF07724 AAA domain (Cdc48 subfamily) LIN97_RS01570 PF17871 AAA lid domain LIN97_RS01570 PF02861 Clp amino terminal domain, pathogenicity island component LIN97_RS01570 PF10431 C-terminal, D2-small domain, of ClpB protein LIN97_RS01575 PF16747 Surface-adhesin protein E LIN97_RS01580 PF00586 AIR synthase related protein, N-terminal domain LIN97_RS01580 PF02769 AIR synthase related protein, C-terminal domain LIN97_RS01585 PF00551 Formyl transferase LIN97_RS01590 PF01678 Diaminopimelate epimerase LIN97_RS01595 PF02899 Phage integrase, N-terminal SAM-like domain LIN97_RS01595 PF00589 Phage integrase family LIN97_RS01600 PF13419 Haloacid dehalogenase-like hydrolase LIN97_RS01625 PF00550 Phosphopantetheine attachment site LIN97_RS01680 PF00109 Beta-ketoacyl synthase, N-terminal domain LIN97_RS01680 PF02801 Beta-ketoacyl synthase, C-terminal domain LIN97_RS01695 PF02801 Beta-ketoacyl synthase, C-terminal domain LIN97_RS01695 PF00109 Beta-ketoacyl synthase, N-terminal domain LIN97_RS01700 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LIN97_RS01700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LIN97_RS01725 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LIN97_RS01730 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LIN97_RS01730 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LIN97_RS01735 PF00459 Inositol monophosphatase family LIN97_RS01745 PF03169 OPT oligopeptide transporter protein LIN97_RS01750 PF04224 Protein of unknown function, DUF417 LIN97_RS01755 PF02311 AraC-like ligand binding domain LIN97_RS01755 PF12833 Helix-turn-helix domain LIN97_RS01760 PF00293 NUDIX domain LIN97_RS01765 PF13419 Haloacid dehalogenase-like hydrolase LIN97_RS01770 PF01479 S4 domain LIN97_RS01775 PF01430 Hsp33 protein LIN97_RS01780 PF02416 mttA/Hcf106 family LIN97_RS01790 PF00902 Sec-independent protein translocase protein (TatC) LIN97_RS01795 PF00490 Delta-aminolevulinic acid dehydratase LIN97_RS01800 PF05746 DALR anticodon binding domain LIN97_RS01800 PF02092 Glycyl-tRNA synthetase beta subunit LIN97_RS01820 PF02091 Glycyl-tRNA synthetase alpha subunit LIN97_RS01825 PF12838 4Fe-4S dicluster domain LIN97_RS01825 PF00037 4Fe-4S binding domain LIN97_RS01830 PF02613 Nitrate reductase delta subunit LIN97_RS01835 PF04976 DMSO reductase anchor subunit (DmsC) LIN97_RS01840 PF12800 4Fe-4S binding domain LIN97_RS01840 PF13247 4Fe-4S dicluster domain LIN97_RS01845 PF00384 Molybdopterin oxidoreductase LIN97_RS01845 PF01568 Molydopterin dinucleotide binding domain LIN97_RS01845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LIN97_RS01860 PF17841 BID domain of Bartonella effector protein (Bep) LIN97_RS01860 PF02661 Fic/DOC family LIN97_RS01870 PF02661 Fic/DOC family LIN97_RS01870 PF17841 BID domain of Bartonella effector protein (Bep) LIN97_RS01890 PF03544 Gram-negative bacterial TonB protein C-terminal LIN97_RS01895 PF02472 Biopolymer transport protein ExbD/TolR LIN97_RS01900 PF01618 MotA/TolQ/ExbB proton channel family LIN97_RS01905 PF01595 Cyclin M transmembrane N-terminal domain LIN97_RS01905 PF03471 Transporter associated domain LIN97_RS01905 PF00571 CBS domain LIN97_RS01910 PF01578 Cytochrome C assembly protein LIN97_RS01915 PF02978 Signal peptide binding domain LIN97_RS01915 PF00448 SRP54-type protein, GTPase domain LIN97_RS01915 PF02881 SRP54-type protein, helical bundle domain LIN97_RS01920 PF00756 Putative esterase LIN97_RS01925 PF08240 Alcohol dehydrogenase GroES-like domain LIN97_RS01925 PF00107 Zinc-binding dehydrogenase LIN97_RS01935 PF00106 short chain dehydrogenase LIN97_RS01945 PF08328 Adenylosuccinate lyase C-terminal LIN97_RS01945 PF00206 Lyase LIN97_RS01950 PF04356 Protein of unknown function (DUF489) LIN97_RS01960 PF00156 Phosphoribosyl transferase domain LIN97_RS01965 PF00639 PPIC-type PPIASE domain LIN97_RS01965 PF09312 SurA N-terminal domain LIN97_RS01970 PF00398 Ribosomal RNA adenine dimethylase LIN97_RS01975 PF00149 Calcineurin-like phosphoesterase LIN97_RS01980 PF08780 Nucleotidyltransferase substrate binding protein like LIN97_RS01985 PF01909 Nucleotidyltransferase domain LIN97_RS01995 PF08264 Anticodon-binding domain of tRNA LIN97_RS01995 PF00133 tRNA synthetases class I (I, L, M and V) LIN97_RS01995 PF13603 Leucyl-tRNA synthetase, Domain 2 LIN97_RS02000 PF04390 Lipopolysaccharide-assembly LIN97_RS02005 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LIN97_RS02005 PF06144 DNA polymerase III, delta subunit LIN97_RS02010 PF00293 NUDIX domain LIN97_RS02015 PF07516 SecA Wing and Scaffold domain LIN97_RS02015 PF01043 SecA preprotein cross-linking domain LIN97_RS02015 PF02810 SEC-C motif LIN97_RS02015 PF07517 SecA DEAD-like domain LIN97_RS02025 PF05258 Dna[CI] antecedent, DciA LIN97_RS02030 PF13411 MerR HTH family regulatory protein LIN97_RS02035 PF13276 HTH-like domain LIN97_RS02035 PF13333 Integrase core domain LIN97_RS02035 PF00665 Integrase core domain LIN97_RS02045 PF17755 UvrA DNA-binding domain LIN97_RS02045 PF17760 UvrA interaction domain LIN97_RS02050 PF00436 Single-strand binding protein family LIN97_RS02055 PF02086 D12 class N6 adenine-specific DNA methyltransferase LIN97_RS02060 PF01761 3-dehydroquinate synthase LIN97_RS02065 PF01202 Shikimate kinase LIN97_RS02070 PF03958 Bacterial type II/III secretion system short domain LIN97_RS02070 PF00263 Bacterial type II and III secretion system protein LIN97_RS02090 PF11104 Type IV pilus assembly protein PilM; LIN97_RS02095 PF00905 Penicillin binding protein transpeptidase domain LIN97_RS02095 PF17092 Penicillin-binding protein OB-like domain LIN97_RS02095 PF00912 Transglycosylase LIN97_RS02100 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LIN97_RS02105 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIN97_RS02105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIN97_RS02110 PF00027 Cyclic nucleotide-binding domain LIN97_RS02110 PF13545 Crp-like helix-turn-helix domain LIN97_RS02115 PF06794 Uncharacterised protein family (UPF0270) LIN97_RS02120 PF00440 Bacterial regulatory proteins, tetR family LIN97_RS02125 PF00692 dUTPase LIN97_RS02130 PF04127 DNA / pantothenate metabolism flavoprotein LIN97_RS02130 PF02441 Flavoprotein LIN97_RS02135 PF04002 RadC-like JAB domain LIN97_RS02140 PF00830 Ribosomal L28 family LIN97_RS02145 PF00471 Ribosomal protein L33 LIN97_RS02150 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LIN97_RS02150 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LIN97_RS02150 PF06827 Zinc finger found in FPG and IleRS LIN97_RS02165 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) LIN97_RS02170 PF01197 Ribosomal protein L31 LIN97_RS02175 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) LIN97_RS02185 PF09612 Bacterial protein of unknown function (HtrL_YibB) LIN97_RS02190 PF17764 3′ DNA-binding domain (3′BD) LIN97_RS02190 PF00271 Helicase conserved C-terminal domain LIN97_RS02190 PF00270 DEAD/DEAH box helicase LIN97_RS02190 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LIN97_RS02190 PF18074 Primosomal protein N C-terminal domain LIN97_RS02195 PF05036 Sporulation related domain LIN97_RS02200 PF00440 Bacterial regulatory proteins, tetR family LIN97_RS02205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LIN97_RS02210 PF00873 AcrB/AcrD/AcrF family LIN97_RS02215 PF13649 Methyltransferase domain LIN97_RS02220 PF01544 CorA-like Mg2+ transporter protein LIN97_RS02225 PF02325 YGGT family LIN97_RS02230 PF02594 Uncharacterised ACR, YggU family COG1872 LIN97_RS02235 PF00881 Nitroreductase family LIN97_RS02240 PF00884 Sulfatase LIN97_RS02245 PF02578 Multi-copper polyphenol oxidoreductase laccase LIN97_RS02250 PF00849 RNA pseudouridylate synthase LIN97_RS02250 PF01479 S4 domain LIN97_RS02255 PF13525 Outer membrane lipoprotein LIN97_RS02260 PF01812 5-formyltetrahydrofolate cyclo-ligase family LIN97_RS02270 PF05164 Cell division protein ZapA LIN97_RS02275 PF03695 Uncharacterised protein family (UPF0149) LIN97_RS02280 PF00557 Metallopeptidase family M24 LIN97_RS02280 PF05195 Aminopeptidase P, N-terminal domain LIN97_RS02285 PF00886 Ribosomal protein S16 LIN97_RS02290 PF05239 PRC-barrel domain LIN97_RS02290 PF01782 RimM N-terminal domain LIN97_RS02295 PF01746 tRNA (Guanine-1)-methyltransferase LIN97_RS02300 PF01245 Ribosomal protein L19 LIN97_RS02305 PF04093 rod shape-determining protein MreD LIN97_RS02310 PF04085 rod shape-determining protein MreC LIN97_RS02320 PF17876 Cold shock domain LIN97_RS02320 PF08461 Ribonuclease R winged-helix domain LIN97_RS02320 PF08206 Ribonuclease B OB domain LIN97_RS02320 PF00773 RNB domain LIN97_RS02320 PF00575 S1 RNA binding domain LIN97_RS02325 PF00588 SpoU rRNA Methylase family LIN97_RS02325 PF08032 RNA 2'-O ribose methyltransferase substrate binding LIN97_RS02330 PF07690 Major Facilitator Superfamily LIN97_RS02335 PF03009 Glycerophosphoryl diester phosphodiesterase family LIN97_RS02340 PF02481 DNA recombination-mediator protein A LIN97_RS02340 PF17782 DprA winged helix domain LIN97_RS02345 PF01281 Ribosomal protein L9, N-terminal domain LIN97_RS02345 PF03948 Ribosomal protein L9, C-terminal domain LIN97_RS02350 PF01084 Ribosomal protein S18 LIN97_RS02355 PF00436 Single-strand binding protein family LIN97_RS02360 PF01250 Ribosomal protein S6 LIN97_RS02365 PF01726 LexA DNA binding domain LIN97_RS02365 PF00717 Peptidase S24-like LIN97_RS02370 PF01553 Acyltransferase LIN97_RS02375 PF00664 ABC transporter transmembrane region LIN97_RS02375 PF00005 ABC transporter LIN97_RS02380 PF02311 AraC-like ligand binding domain LIN97_RS02380 PF12833 Helix-turn-helix domain LIN97_RS02385 PF02627 Carboxymuconolactone decarboxylase family LIN97_RS02390 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LIN97_RS02400 PF01467 Cytidylyltransferase-like LIN97_RS02405 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LIN97_RS02405 PF00534 Glycosyl transferases group 1 LIN97_RS02410 PF00535 Glycosyl transferase family 2 LIN97_RS02420 PF01476 LysM domain LIN97_RS02420 PF01551 Peptidase family M23 LIN97_RS02430 PF09335 SNARE associated Golgi protein LIN97_RS02435 PF01975 Survival protein SurE LIN97_RS02440 PF01142 tRNA pseudouridine synthase D (TruD) LIN97_RS02445 PF02542 YgbB family LIN97_RS02450 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LIN97_RS02455 PF04977 Septum formation initiator LIN97_RS02460 PF00834 Ribulose-phosphate 3 epimerase family LIN97_RS02465 PF13419 Haloacid dehalogenase-like hydrolase LIN97_RS02470 PF00005 ABC transporter LIN97_RS02475 PF18075 FtsX extracellular domain LIN97_RS02495 PF12146 Serine aminopeptidase, S33 LIN97_RS02500 PF04932 O-Antigen ligase LIN97_RS02505 PF01116 Fructose-bisphosphate aldolase class-II LIN97_RS02510 PF00162 Phosphoglycerate kinase LIN97_RS02515 PF00445 Ribonuclease T2 family LIN97_RS02520 PF00037 4Fe-4S binding domain LIN97_RS02525 PF00588 SpoU rRNA Methylase family LIN97_RS02525 PF08032 RNA 2'-O ribose methyltransferase substrate binding LIN97_RS02530 PF13091 PLD-like domain LIN97_RS02535 PF13333 Integrase core domain LIN97_RS02535 PF13276 HTH-like domain LIN97_RS02535 PF00665 Integrase core domain LIN97_RS02555 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LIN97_RS02555 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LIN97_RS02565 PF13407 Periplasmic binding protein domain LIN97_RS02570 PF00005 ABC transporter LIN97_RS02575 PF02653 Branched-chain amino acid transport system / permease component LIN97_RS02580 PF00155 Aminotransferase class I and II LIN97_RS02585 PF03553 Na+/H+ antiporter family LIN97_RS02590 PF12833 Helix-turn-helix domain LIN97_RS02595 PF07690 Major Facilitator Superfamily LIN97_RS02600 PF03830 PTS system sorbose subfamily IIB component LIN97_RS02600 PF03610 PTS system fructose IIA component LIN97_RS02605 PF03609 PTS system sorbose-specific iic component LIN97_RS02610 PF03613 PTS system mannose/fructose/sorbose family IID component LIN97_RS02615 PF02384 N-6 DNA Methylase LIN97_RS02615 PF12161 HsdM N-terminal domain LIN97_RS02620 PF01420 Type I restriction modification DNA specificity domain LIN97_RS02635 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LIN97_RS02635 PF18766 SWI2/SNF2 ATPase LIN97_RS02635 PF12008 Type I restriction and modification enzyme - subunit R C terminal LIN97_RS02640 PF13416 Bacterial extracellular solute-binding protein LIN97_RS02645 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LIN97_RS02650 PF02874 ATP synthase alpha/beta family, beta-barrel domain LIN97_RS02650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LIN97_RS02655 PF00231 ATP synthase LIN97_RS02660 PF00306 ATP synthase alpha/beta chain, C terminal domain LIN97_RS02660 PF02874 ATP synthase alpha/beta family, beta-barrel domain LIN97_RS02660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LIN97_RS02665 PF00213 ATP synthase delta (OSCP) subunit LIN97_RS02670 PF00430 ATP synthase B/B' CF(0) LIN97_RS02675 PF00137 ATP synthase subunit C LIN97_RS02680 PF00119 ATP synthase A chain LIN97_RS02685 PF03899 ATP synthase I chain LIN97_RS02690 PF02527 rRNA small subunit methyltransferase G LIN97_RS02695 PF01638 HxlR-like helix-turn-helix LIN97_RS02700 PF05368 NmrA-like family LIN97_RS02705 PF01134 Glucose inhibited division protein A LIN97_RS02705 PF13932 GidA associated domain LIN97_RS02710 PF00258 Flavodoxin LIN97_RS02715 PF06005 Cell division protein ZapB LIN97_RS02720 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LIN97_RS02725 PF06426 Serine acetyltransferase, N-terminal LIN97_RS02725 PF00132 Bacterial transferase hexapeptide (six repeats) LIN97_RS02730 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LIN97_RS02730 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LIN97_RS02735 PF02556 Preprotein translocase subunit SecB LIN97_RS02740 PF00581 Rhodanese-like domain LIN97_RS02745 PF03605 Anaerobic c4-dicarboxylate membrane transporter LIN97_RS02750 PF00664 ABC transporter transmembrane region LIN97_RS02750 PF00005 ABC transporter LIN97_RS02755 PF00664 ABC transporter transmembrane region LIN97_RS02755 PF00005 ABC transporter LIN97_RS02760 PF00440 Bacterial regulatory proteins, tetR family LIN97_RS02765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIN97_RS02765 PF03466 LysR substrate binding domain LIN97_RS02770 PF00462 Glutaredoxin LIN97_RS02770 PF08534 Redoxin LIN97_RS02775 PF04102 SlyX LIN97_RS02780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LIN97_RS02780 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LIN97_RS02785 PF13309 HTH domain LIN97_RS02785 PF08348 YheO-like PAS domain LIN97_RS02790 PF02635 DsrE/DsrF-like family LIN97_RS02795 PF02635 DsrE/DsrF-like family LIN97_RS02800 PF04077 DsrH like protein LIN97_RS02805 PF00005 ABC transporter LIN97_RS02810 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS02815 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIN97_RS02820 PF01266 FAD dependent oxidoreductase LIN97_RS02830 PF13274 Protein of unknown function (DUF4065) LIN97_RS02835 PF04607 Region found in RelA / SpoT proteins LIN97_RS02840 PF01380 SIS domain LIN97_RS02845 PF03702 Anhydro-N-acetylmuramic acid kinase LIN97_RS02850 PF00132 Bacterial transferase hexapeptide (six repeats) LIN97_RS02850 PF12804 MobA-like NTP transferase domain LIN97_RS02860 PF08220 DeoR-like helix-turn-helix domain LIN97_RS02860 PF00455 DeoR C terminal sensor domain LIN97_RS02865 PF01791 DeoC/LacD family aldolase LIN97_RS02880 PF01914 MarC family integral membrane protein LIN97_RS02890 PF00154 recA bacterial DNA recombination protein LIN97_RS02895 PF02631 RecX family LIN97_RS02900 PF01042 Endoribonuclease L-PSP LIN97_RS02905 PF02779 Transketolase, pyrimidine binding domain LIN97_RS02905 PF02780 Transketolase, C-terminal domain LIN97_RS02905 PF00456 Transketolase, thiamine diphosphate binding domain LIN97_RS02910 PF00923 Transaldolase/Fructose-6-phosphate aldolase LIN97_RS02935 PF00994 Probable molybdopterin binding domain LIN97_RS02955 PF01351 Ribonuclease HII LIN97_RS02960 PF02684 Lipid-A-disaccharide synthetase LIN97_RS02965 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LIN97_RS02965 PF00132 Bacterial transferase hexapeptide (six repeats) LIN97_RS02970 PF07977 FabA-like domain LIN97_RS02975 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LIN97_RS02975 PF00132 Bacterial transferase hexapeptide (six repeats) LIN97_RS02980 PF03938 Outer membrane protein (OmpH-like) LIN97_RS02985 PF01103 Surface antigen LIN97_RS02985 PF07244 Surface antigen variable number repeat LIN97_RS02990 PF00595 PDZ domain LIN97_RS02990 PF17820 PDZ domain LIN97_RS02990 PF02163 Peptidase family M50 LIN97_RS03000 PF01255 Putative undecaprenyl diphosphate synthase LIN97_RS03005 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LIN97_RS03005 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LIN97_RS03005 PF13288 DXP reductoisomerase C-terminal domain LIN97_RS03010 PF01765 Ribosome recycling factor LIN97_RS03015 PF00696 Amino acid kinase family LIN97_RS03020 PF06826 Predicted Permease Membrane Region LIN97_RS03020 PF02080 TrkA-C domain LIN97_RS03025 PF06472 ABC transporter transmembrane region 2 LIN97_RS03025 PF00005 ABC transporter LIN97_RS03030 PF07715 TonB-dependent Receptor Plug Domain LIN97_RS03030 PF00593 TonB dependent receptor LIN97_RS03035 PF00455 DeoR C terminal sensor domain LIN97_RS03035 PF08220 DeoR-like helix-turn-helix domain LIN97_RS03040 PF01694 Rhomboid family LIN97_RS03045 PF17364 Family of unknown function (DUF5389) LIN97_RS03050 PF00581 Rhodanese-like domain LIN97_RS03055 PF03350 Uncharacterized protein family, UPF0114 LIN97_RS03060 PF02646 RmuC family LIN97_RS03065 PF01396 Topoisomerase DNA binding C4 zinc finger LIN97_RS03070 PF01300 Telomere recombination LIN97_RS03075 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LIN97_RS03075 PF08501 Shikimate dehydrogenase substrate binding domain LIN97_RS03075 PF01488 Shikimate / quinate 5-dehydrogenase LIN97_RS03080 PF00892 EamA-like transporter family LIN97_RS03085 PF03466 LysR substrate binding domain LIN97_RS03085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIN97_RS03090 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LIN97_RS03090 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LIN97_RS03095 PF00164 Ribosomal protein S12/S23 LIN97_RS03100 PF00177 Ribosomal protein S7p/S5e LIN97_RS03105 PF03144 Elongation factor Tu domain 2 LIN97_RS03105 PF00009 Elongation factor Tu GTP binding domain LIN97_RS03105 PF03764 Elongation factor G, domain IV LIN97_RS03105 PF14492 Elongation Factor G, domain II LIN97_RS03105 PF00679 Elongation factor G C-terminus LIN97_RS03110 PF03143 Elongation factor Tu C-terminal domain LIN97_RS03110 PF00009 Elongation factor Tu GTP binding domain LIN97_RS03110 PF03144 Elongation factor Tu domain 2 LIN97_RS03115 PF04994 TfoX C-terminal domain LIN97_RS03115 PF04993 TfoX N-terminal domain LIN97_RS03120 PF00140 Sigma-70 factor, region 1.2 LIN97_RS03120 PF04542 Sigma-70 region 2 LIN97_RS03120 PF04545 Sigma-70, region 4 LIN97_RS03130 PF01565 FAD binding domain LIN97_RS03130 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LIN97_RS03135 PF00672 HAMP domain LIN97_RS03135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIN97_RS03135 PF07730 Histidine kinase LIN97_RS03135 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LIN97_RS03140 PF03927 NapD protein LIN97_RS03145 PF01568 Molydopterin dinucleotide binding domain LIN97_RS03145 PF10518 TAT (twin-arginine translocation) pathway signal sequence LIN97_RS03145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LIN97_RS03145 PF00384 Molybdopterin oxidoreductase LIN97_RS03150 PF12838 4Fe-4S dicluster domain LIN97_RS03150 PF12800 4Fe-4S binding domain LIN97_RS03155 PF12801 4Fe-4S binding domain LIN97_RS03155 PF12837 4Fe-4S binding domain LIN97_RS03160 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LIN97_RS03165 PF03264 NapC/NirT cytochrome c family, N-terminal region LIN97_RS03170 PF05257 CHAP domain LIN97_RS03170 PF03738 Glutathionylspermidine synthase preATP-grasp LIN97_RS03175 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LIN97_RS03180 PF02661 Fic/DOC family LIN97_RS03185 PF01370 NAD dependent epimerase/dehydratase family LIN97_RS03195 PF02872 5'-nucleotidase, C-terminal domain LIN97_RS03195 PF00149 Calcineurin-like phosphoesterase LIN97_RS03210 PF01367 5'-3' exonuclease, C-terminal SAM fold LIN97_RS03210 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LIN97_RS03210 PF00476 DNA polymerase family A LIN97_RS03210 PF01612 3'-5' exonuclease LIN97_RS03220 PF07119 Protein of unknown function (DUF1375) LIN97_RS03225 PF00580 UvrD/REP helicase N-terminal domain LIN97_RS03225 PF13361 UvrD-like helicase C-terminal domain LIN97_RS03240 PF00874 PRD domain LIN97_RS03245 PF13419 Haloacid dehalogenase-like hydrolase LIN97_RS03250 PF00132 Bacterial transferase hexapeptide (six repeats) LIN97_RS03250 PF12464 Maltose acetyltransferase LIN97_RS03260 PF02664 S-Ribosylhomocysteinase (LuxS) LIN97_RS03270 PF00849 RNA pseudouridylate synthase LIN97_RS03275 PF04973 Nicotinamide mononucleotide transporter LIN97_RS03280 PF05175 Methyltransferase small domain LIN97_RS03285 PF00270 DEAD/DEAH box helicase LIN97_RS03285 PF00271 Helicase conserved C-terminal domain LIN97_RS03310 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LIN97_RS03310 PF01243 Pyridoxamine 5'-phosphate oxidase LIN97_RS03315 PF07690 Major Facilitator Superfamily LIN97_RS03325 PF00535 Glycosyl transferase family 2 LIN97_RS03330 PF14883 Hypothetical glycosyl hydrolase family 13 LIN97_RS03330 PF01522 Polysaccharide deacetylase LIN97_RS03340 PF01048 Phosphorylase superfamily LIN97_RS03345 PF07662 Na+ dependent nucleoside transporter C-terminus LIN97_RS03345 PF01773 Na+ dependent nucleoside transporter N-terminus LIN97_RS03345 PF07670 Nucleoside recognition LIN97_RS03355 PF03613 PTS system mannose/fructose/sorbose family IID component LIN97_RS03360 PF03609 PTS system sorbose-specific iic component LIN97_RS03365 PF03830 PTS system sorbose subfamily IIB component LIN97_RS03365 PF03610 PTS system fructose IIA component LIN97_RS03375 PF00448 SRP54-type protein, GTPase domain LIN97_RS03375 PF02881 SRP54-type protein, helical bundle domain LIN97_RS03380 PF00579 tRNA synthetases class I (W and Y) LIN97_RS03385 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LIN97_RS03390 PF01435 Peptidase family M48 LIN97_RS03395 PF00719 Inorganic pyrophosphatase LIN97_RS03400 PF03222 Tryptophan/tyrosine permease family LIN97_RS03410 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LIN97_RS03415 PF00227 Proteasome subunit LIN97_RS03420 PF10431 C-terminal, D2-small domain, of ClpB protein LIN97_RS03420 PF00004 ATPase family associated with various cellular activities (AAA) LIN97_RS03420 PF07724 AAA domain (Cdc48 subfamily) LIN97_RS03425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIN97_RS03430 PF04333 MlaA lipoprotein LIN97_RS03435 PF03887 YfbU domain LIN97_RS03440 PF00300 Histidine phosphatase superfamily (branch 1) LIN97_RS03445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LIN97_RS03445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LIN97_RS03445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LIN97_RS03445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LIN97_RS03450 PF01551 Peptidase family M23 LIN97_RS03455 PF04748 Divergent polysaccharide deacetylase LIN97_RS03470 PF00665 Integrase core domain LIN97_RS03525 PF03527 RHS protein LIN97_RS03550 PF06508 Queuosine biosynthesis protein QueC LIN97_RS03575 PF01926 50S ribosome-binding GTPase LIN97_RS03580 PF04393 Protein of unknown function (DUF535) LIN97_RS03585 PF00588 SpoU rRNA Methylase family LIN97_RS03595 PF03180 NLPA lipoprotein LIN97_RS03600 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS03605 PF00005 ABC transporter LIN97_RS03605 PF09383 NIL domain LIN97_RS03655 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LIN97_RS03665 PF13276 HTH-like domain LIN97_RS03665 PF00665 Integrase core domain LIN97_RS03665 PF13333 Integrase core domain LIN97_RS03685 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LIN97_RS03690 PF10415 Fumarase C C-terminus LIN97_RS03690 PF00206 Lyase LIN97_RS03700 PF00166 Chaperonin 10 Kd subunit LIN97_RS03705 PF00118 TCP-1/cpn60 chaperonin family LIN97_RS03710 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LIN97_RS03710 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LIN97_RS03725 PF00665 Integrase core domain LIN97_RS03725 PF13276 HTH-like domain LIN97_RS03725 PF13333 Integrase core domain LIN97_RS03735 PF01219 Prokaryotic diacylglycerol kinase LIN97_RS03740 PF13291 ACT domain LIN97_RS03740 PF04607 Region found in RelA / SpoT proteins LIN97_RS03740 PF02824 TGS domain LIN97_RS03745 PF01938 TRAM domain LIN97_RS03745 PF05958 tRNA (Uracil-5-)-methyltransferase LIN97_RS03750 PF11967 Recombination protein O N terminal LIN97_RS03750 PF02565 Recombination protein O C terminal LIN97_RS03755 PF00889 Elongation factor TS LIN97_RS03760 PF00318 Ribosomal protein S2 LIN97_RS03770 PF01571 Aminomethyltransferase folate-binding domain LIN97_RS03775 PF03755 YicC-like family, N-terminal region LIN97_RS03775 PF08340 Domain of unknown function (DUF1732) LIN97_RS03780 PF01138 3' exoribonuclease family, domain 1 LIN97_RS03780 PF03725 3' exoribonuclease family, domain 2 LIN97_RS03785 PF00156 Phosphoribosyl transferase domain LIN97_RS03790 PF00226 DnaJ domain LIN97_RS03790 PF05099 Tellurite resistance protein TerB LIN97_RS03800 PF00005 ABC transporter LIN97_RS03805 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS03810 PF01547 Bacterial extracellular solute-binding protein LIN97_RS03815 PF04320 Protein with unknown function (DUF469) LIN97_RS03820 PF02390 Putative methyltransferase LIN97_RS03825 PF00730 HhH-GPD superfamily base excision DNA repair protein LIN97_RS03825 PF14815 NUDIX domain LIN97_RS03830 PF04362 Bacterial Fe(2+) trafficking LIN97_RS03835 PF01464 Transglycosylase SLT domain LIN97_RS03835 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LIN97_RS03850 PF03923 Uncharacterized lipoprotein LIN97_RS03855 PF01722 BolA-like protein LIN97_RS03860 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LIN97_RS03860 PF11973 NQRA C-terminal domain LIN97_RS03865 PF03116 NQR2, RnfD, RnfE family LIN97_RS03870 PF04205 FMN-binding domain LIN97_RS03875 PF02508 Rnf-Nqr subunit, membrane protein LIN97_RS03880 PF02508 Rnf-Nqr subunit, membrane protein LIN97_RS03885 PF00970 Oxidoreductase FAD-binding domain LIN97_RS03885 PF00111 2Fe-2S iron-sulfur cluster binding domain LIN97_RS03885 PF00175 Oxidoreductase NAD-binding domain LIN97_RS03890 PF02424 ApbE family LIN97_RS03895 PF04400 (Na+)-NQR maturation NqrM LIN97_RS03905 PF03952 Enolase, N-terminal domain LIN97_RS03905 PF00113 Enolase, C-terminal TIM barrel domain LIN97_RS03910 PF03652 Holliday junction resolvase LIN97_RS03915 PF02622 Uncharacterized ACR, COG1678 LIN97_RS03920 PF04452 RNA methyltransferase LIN97_RS03925 PF01340 Met Apo-repressor, MetJ LIN97_RS03930 PF00483 Nucleotidyl transferase LIN97_RS03935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LIN97_RS03935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LIN97_RS03935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LIN97_RS03935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LIN97_RS03940 PF02599 Global regulator protein family LIN97_RS03945 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LIN97_RS03945 PF01411 tRNA synthetases class II (A) LIN97_RS03945 PF02272 DHHA1 domain LIN97_RS03950 PF00582 Universal stress protein family LIN97_RS03955 PF03819 MazG nucleotide pyrophosphohydrolase domain LIN97_RS03965 PF11893 Domain of unknown function (DUF3413) LIN97_RS03965 PF00884 Sulfatase LIN97_RS03970 PF07208 Protein of unknown function (DUF1414) LIN97_RS03975 PF04245 37-kD nucleoid-associated bacterial protein LIN97_RS03980 PF04355 SmpA / OmlA family LIN97_RS03985 PF00486 Transcriptional regulatory protein, C terminal LIN97_RS03985 PF00072 Response regulator receiver domain LIN97_RS03990 PF00512 His Kinase A (phospho-acceptor) domain LIN97_RS03990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIN97_RS03990 PF00672 HAMP domain LIN97_RS03990 PF16527 Two-component sensor protein CpxA, periplasmic domain LIN97_RS03995 PF03616 Sodium/glutamate symporter LIN97_RS04000 PF02580 D-Tyr-tRNA(Tyr) deacylase LIN97_RS04005 PF03631 Virulence factor BrkB LIN97_RS04010 PF02810 SEC-C motif LIN97_RS04015 PF03473 MOSC domain LIN97_RS04020 PF05872 Bacterial protein of unknown function (DUF853) LIN97_RS04030 PF03466 LysR substrate binding domain LIN97_RS04030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIN97_RS04035 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LIN97_RS04060 PF03743 Bacterial conjugation TrbI-like protein LIN97_RS04065 PF00437 Type II/IV secretion system protein LIN97_RS04070 PF02534 Type IV secretory system Conjugative DNA transfer LIN97_RS04095 PF13614 AAA domain LIN97_RS04120 PF00561 alpha/beta hydrolase fold LIN97_RS04125 PF01380 SIS domain LIN97_RS04130 PF00455 DeoR C terminal sensor domain LIN97_RS04130 PF08220 DeoR-like helix-turn-helix domain LIN97_RS04135 PF00216 Bacterial DNA-binding protein LIN97_RS04140 PF04222 Protein of unknown function (DUF416) LIN97_RS04145 PF01208 Uroporphyrinogen decarboxylase (URO-D) LIN97_RS04150 PF09297 NADH pyrophosphatase zinc ribbon domain LIN97_RS04150 PF00293 NUDIX domain LIN97_RS04160 PF01293 Phosphoenolpyruvate carboxykinase LIN97_RS04165 PF02541 Ppx/GppA phosphatase family LIN97_RS04170 PF04357 TamB, inner membrane protein subunit of TAM complex LIN97_RS04175 PF17243 POTRA domain TamA domain 1 LIN97_RS04175 PF01103 Surface antigen LIN97_RS04180 PF00072 Response regulator receiver domain LIN97_RS04180 PF00196 Bacterial regulatory proteins, luxR family LIN97_RS04185 PF12633 Adenylate cyclase NT domain LIN97_RS04185 PF01295 Adenylate cyclase, class-I LIN97_RS04190 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LIN97_RS04190 PF03900 Porphobilinogen deaminase, C-terminal domain LIN97_RS04195 PF02602 Uroporphyrinogen-III synthase HemD LIN97_RS04200 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LIN97_RS04205 PF07219 HemY protein N-terminus LIN97_RS04220 PF08281 Sigma-70, region 4 LIN97_RS04220 PF04542 Sigma-70 region 2 LIN97_RS04230 PF03449 Transcription elongation factor, N-terminal LIN97_RS04230 PF01272 Transcription elongation factor, GreA/GreB, C-term LIN97_RS04240 PF00300 Histidine phosphatase superfamily (branch 1) LIN97_RS04245 PF00939 Sodium:sulfate symporter transmembrane region LIN97_RS04250 PF03466 LysR substrate binding domain LIN97_RS04250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIN97_RS04255 PF09371 Tex-like protein N-terminal domain LIN97_RS04255 PF00575 S1 RNA binding domain LIN97_RS04255 PF17674 HHH domain LIN97_RS04255 PF16921 Tex protein YqgF-like domain LIN97_RS04265 PF02653 Branched-chain amino acid transport system / permease component LIN97_RS04270 PF00005 ABC transporter LIN97_RS04280 PF03144 Elongation factor Tu domain 2 LIN97_RS04280 PF03143 Elongation factor Tu C-terminal domain LIN97_RS04280 PF00009 Elongation factor Tu GTP binding domain LIN97_RS04305 PF00485 Phosphoribulokinase / Uridine kinase family LIN97_RS04310 PF01751 Toprim domain LIN97_RS04310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIN97_RS04310 PF18053 DNA gyrase B subunit insert domain LIN97_RS04310 PF00986 DNA gyrase B subunit, carboxyl terminus LIN97_RS04310 PF00204 DNA gyrase B LIN97_RS04315 PF00271 Helicase conserved C-terminal domain LIN97_RS04315 PF09382 RQC domain LIN97_RS04315 PF16124 RecQ zinc-binding LIN97_RS04315 PF00570 HRDC domain LIN97_RS04315 PF00270 DEAD/DEAH box helicase LIN97_RS04320 PF01491 Frataxin-like domain LIN97_RS04330 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LIN97_RS04330 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LIN97_RS04335 PF07274 Protein of unknown function (DUF1440) LIN97_RS04340 PF03352 Methyladenine glycosylase LIN97_RS04345 PF03968 OstA-like protein LIN97_RS04345 PF04453 LPS transport system D LIN97_RS04350 PF00156 Phosphoribosyl transferase domain LIN97_RS04355 PF07687 Peptidase dimerisation domain LIN97_RS04355 PF01546 Peptidase family M20/M25/M40 LIN97_RS04360 PF00106 short chain dehydrogenase LIN97_RS04365 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LIN97_RS04375 PF03888 MucB/RseB N-terminal domain LIN97_RS04375 PF17188 MucB/RseB C-terminal domain LIN97_RS04380 PF03873 Anti sigma-E protein RseA, C-terminal domain LIN97_RS04380 PF03872 Anti sigma-E protein RseA, N-terminal domain LIN97_RS04385 PF04542 Sigma-70 region 2 LIN97_RS04385 PF08281 Sigma-70, region 4 LIN97_RS04390 PF03937 Flavinator of succinate dehydrogenase LIN97_RS04395 PF00893 Small Multidrug Resistance protein LIN97_RS04400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIN97_RS04400 PF04073 Aminoacyl-tRNA editing domain LIN97_RS04400 PF03129 Anticodon binding domain LIN97_RS04405 PF03841 L-seryl-tRNA selenium transferase LIN97_RS04405 PF12390 Selenocysteine synthase N terminal LIN97_RS04410 PF09107 Elongation factor SelB, winged helix LIN97_RS04410 PF09106 Elongation factor SelB, winged helix LIN97_RS04410 PF03144 Elongation factor Tu domain 2 LIN97_RS04410 PF00009 Elongation factor Tu GTP binding domain LIN97_RS04420 PF02308 MgtC family LIN97_RS04430 PF00209 Sodium:neurotransmitter symporter family LIN97_RS04485 PF00437 Type II/IV secretion system protein LIN97_RS04500 PF13629 Pilus formation protein N terminal region LIN97_RS04500 PF00263 Bacterial type II and III secretion system protein LIN97_RS04500 PF04972 BON domain LIN97_RS04530 PF02130 Uncharacterized protein family UPF0054 LIN97_RS04540 PF05127 Helicase LIN97_RS04540 PF17176 tRNA-binding domain LIN97_RS04540 PF13718 GNAT acetyltransferase 2 LIN97_RS04550 PF17757 UvrB interaction domain LIN97_RS04550 PF03461 TRCF domain LIN97_RS04550 PF00271 Helicase conserved C-terminal domain LIN97_RS04550 PF00270 DEAD/DEAH box helicase LIN97_RS04550 PF02559 CarD-like/TRCF domain LIN97_RS04555 PF13580 SIS domain LIN97_RS04560 PF00005 ABC transporter LIN97_RS04565 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIN97_RS04570 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS04575 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS04580 PF02554 Carbon starvation protein CstA LIN97_RS04585 PF02381 MraZ protein, putative antitoxin-like LIN97_RS04590 PF01795 MraW methylase family LIN97_RS04595 PF04999 Cell division protein FtsL LIN97_RS04600 PF03717 Penicillin-binding Protein dimerisation domain LIN97_RS04600 PF00905 Penicillin binding protein transpeptidase domain LIN97_RS04605 PF08245 Mur ligase middle domain LIN97_RS04605 PF02875 Mur ligase family, glutamate ligase domain LIN97_RS04605 PF01225 Mur ligase family, catalytic domain LIN97_RS04610 PF08245 Mur ligase middle domain LIN97_RS04610 PF02875 Mur ligase family, glutamate ligase domain LIN97_RS04610 PF01225 Mur ligase family, catalytic domain LIN97_RS04615 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LIN97_RS04615 PF00953 Glycosyl transferase family 4 LIN97_RS04620 PF08245 Mur ligase middle domain LIN97_RS04620 PF02875 Mur ligase family, glutamate ligase domain LIN97_RS04625 PF01098 Cell cycle protein LIN97_RS04630 PF03033 Glycosyltransferase family 28 N-terminal domain LIN97_RS04630 PF04101 Glycosyltransferase family 28 C-terminal domain LIN97_RS04635 PF01225 Mur ligase family, catalytic domain LIN97_RS04635 PF08245 Mur ligase middle domain LIN97_RS04635 PF02875 Mur ligase family, glutamate ligase domain LIN97_RS04640 PF01820 D-ala D-ala ligase N-terminus LIN97_RS04640 PF07478 D-ala D-ala ligase C-terminus LIN97_RS04645 PF08478 POTRA domain, FtsQ-type LIN97_RS04645 PF03799 Cell division protein FtsQ LIN97_RS04650 PF02491 SHS2 domain inserted in FTSA LIN97_RS04655 PF00091 Tubulin/FtsZ family, GTPase domain LIN97_RS04655 PF12327 FtsZ family, C-terminal domain LIN97_RS04660 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LIN97_RS04665 PF00800 Prephenate dehydratase LIN97_RS04665 PF01817 Chorismate mutase type II LIN97_RS04670 PF00183 Hsp90 protein LIN97_RS04670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIN97_RS04675 PF03960 ArsC family LIN97_RS04680 PF01546 Peptidase family M20/M25/M40 LIN97_RS04680 PF07687 Peptidase dimerisation domain LIN97_RS04685 PF02557 D-alanyl-D-alanine carboxypeptidase LIN97_RS04690 PF00293 NUDIX domain LIN97_RS04695 PF00149 Calcineurin-like phosphoesterase LIN97_RS04720 PF06508 Queuosine biosynthesis protein QueC LIN97_RS04725 PF13173 AAA domain LIN97_RS04725 PF13635 Domain of unknown function (DUF4143) LIN97_RS04730 PF08240 Alcohol dehydrogenase GroES-like domain LIN97_RS04730 PF00107 Zinc-binding dehydrogenase LIN97_RS04735 PF01170 Putative RNA methylase family UPF0020 LIN97_RS04735 PF10672 S-adenosylmethionine-dependent methyltransferase LIN97_RS04735 PF02926 THUMP domain LIN97_RS04740 PF02313 Fumarate reductase subunit D LIN97_RS04745 PF02300 Fumarate reductase subunit C LIN97_RS04750 PF13085 2Fe-2S iron-sulfur cluster binding domain LIN97_RS04750 PF13183 4Fe-4S dicluster domain LIN97_RS04755 PF00890 FAD binding domain LIN97_RS04755 PF02910 Fumarate reductase flavoprotein C-term LIN97_RS04760 PF00152 tRNA synthetases class II (D, K and N) LIN97_RS04765 PF00005 ABC transporter LIN97_RS04770 PF01032 FecCD transport family LIN97_RS04775 PF01032 FecCD transport family LIN97_RS04780 PF01497 Periplasmic binding protein LIN97_RS04785 PF00149 Calcineurin-like phosphoesterase LIN97_RS04790 PF02575 YbaB/EbfC DNA-binding family LIN97_RS04795 PF02132 RecR protein LIN97_RS04795 PF13662 Toprim domain LIN97_RS04800 PF01131 DNA topoisomerase LIN97_RS04800 PF01751 Toprim domain LIN97_RS04805 PF03840 Preprotein translocase SecG subunit LIN97_RS04820 PF00912 Transglycosylase LIN97_RS04825 PF01371 Trp repressor protein LIN97_RS04830 PF01464 Transglycosylase SLT domain LIN97_RS04830 PF14718 Soluble lytic murein transglycosylase L domain LIN97_RS04835 PF03795 YCII-related domain LIN97_RS04840 PF03061 Thioesterase superfamily LIN97_RS04845 PF04279 Intracellular septation protein A LIN97_RS04855 PF03922 OmpW family LIN97_RS04860 PF02463 RecF/RecN/SMC N terminal domain LIN97_RS04865 PF01513 ATP-NAD kinase LIN97_RS04870 PF01025 GrpE LIN97_RS04880 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LIN97_RS04880 PF01266 FAD dependent oxidoreductase LIN97_RS04885 PF02801 Beta-ketoacyl synthase, C-terminal domain LIN97_RS04885 PF00109 Beta-ketoacyl synthase, N-terminal domain LIN97_RS04890 PF00989 PAS fold LIN97_RS04890 PF01627 Hpt domain LIN97_RS04890 PF18415 Histidine kinase receptor ArcB trans-membrane domain LIN97_RS04890 PF00512 His Kinase A (phospho-acceptor) domain LIN97_RS04890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIN97_RS04890 PF00072 Response regulator receiver domain LIN97_RS04895 PF02653 Branched-chain amino acid transport system / permease component LIN97_RS04905 PF13407 Periplasmic binding protein domain LIN97_RS04910 PF00356 Bacterial regulatory proteins, lacI family LIN97_RS04920 PF10509 Galactokinase galactose-binding signature LIN97_RS04920 PF00288 GHMP kinases N terminal domain LIN97_RS04920 PF08544 GHMP kinases C terminal LIN97_RS04925 PF01263 Aldose 1-epimerase LIN97_RS04945 PF00939 Sodium:sulfate symporter transmembrane region LIN97_RS04950 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase LIN97_RS04950 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LIN97_RS04955 PF04223 Citrate lyase, alpha subunit (CitF) LIN97_RS04960 PF03328 HpcH/HpaI aldolase/citrate lyase family LIN97_RS04965 PF06857 Malonate decarboxylase delta subunit (MdcD) LIN97_RS04970 PF08218 Citrate lyase ligase C-terminal domain LIN97_RS04975 PF03471 Transporter associated domain LIN97_RS04975 PF00571 CBS domain LIN97_RS04980 PF00795 Carbon-nitrogen hydrolase LIN97_RS04985 PF01176 Translation initiation factor 1A / IF-1 LIN97_RS04990 PF00883 Cytosol aminopeptidase family, catalytic domain LIN97_RS04990 PF12404 Peptidase LIN97_RS04995 PF00334 Nucleoside diphosphate kinase LIN97_RS05000 PF00728 Glycosyl hydrolase family 20, catalytic domain LIN97_RS05000 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain LIN97_RS05000 PF03173 Putative carbohydrate binding domain LIN97_RS05000 PF02838 Glycosyl hydrolase family 20, domain 2 LIN97_RS05005 PF10609 NUBPL iron-transfer P-loop NTPase LIN97_RS05010 PF09334 tRNA synthetases class I (M) LIN97_RS05010 PF01588 Putative tRNA binding domain LIN97_RS05015 PF04384 Iron-sulphur cluster assembly LIN97_RS05020 PF00111 2Fe-2S iron-sulfur cluster binding domain LIN97_RS05025 PF00012 Hsp70 protein LIN97_RS05030 PF07743 HSCB C-terminal oligomerisation domain LIN97_RS05035 PF01521 Iron-sulphur cluster biosynthesis LIN97_RS05040 PF01592 NifU-like N terminal domain LIN97_RS05045 PF00266 Aminotransferase class-V LIN97_RS05050 PF02082 Transcriptional regulator LIN97_RS05055 PF00588 SpoU rRNA Methylase family LIN97_RS05060 PF00459 Inositol monophosphatase family LIN97_RS05070 PF08402 TOBE domain LIN97_RS05070 PF00005 ABC transporter LIN97_RS05075 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS05090 PF00485 Phosphoribulokinase / Uridine kinase family LIN97_RS05095 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) LIN97_RS05105 PF07690 Major Facilitator Superfamily LIN97_RS05110 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LIN97_RS05110 PF01926 50S ribosome-binding GTPase LIN97_RS05115 PF01556 DnaJ C terminal domain LIN97_RS05115 PF00226 DnaJ domain LIN97_RS05125 PF00709 Adenylosuccinate synthetase LIN97_RS05130 PF08003 Protein of unknown function (DUF1698) LIN97_RS05135 PF00474 Sodium:solute symporter family LIN97_RS05140 PF10150 Ribonuclease E/G family LIN97_RS05140 PF00575 S1 RNA binding domain LIN97_RS05145 PF04399 Glutaredoxin 2, C terminal domain LIN97_RS05145 PF13417 Glutathione S-transferase, N-terminal domain LIN97_RS05150 PF02146 Sir2 family LIN97_RS05160 PF03498 Cytolethal distending toxin A/C domain LIN97_RS05165 PF03372 Endonuclease/Exonuclease/phosphatase family LIN97_RS05205 PF02899 Phage integrase, N-terminal SAM-like domain LIN97_RS05205 PF00589 Phage integrase family LIN97_RS05270 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LIN97_RS05270 PF10135 Rod binding protein LIN97_RS05390 PF04002 RadC-like JAB domain LIN97_RS05415 PF01751 Toprim domain LIN97_RS05415 PF01131 DNA topoisomerase LIN97_RS05440 PF01381 Helix-turn-helix LIN97_RS05440 PF00145 C-5 cytosine-specific DNA methylase LIN97_RS05460 PF00436 Single-strand binding protein family LIN97_RS05505 PF00772 DnaB-like helicase N terminal domain LIN97_RS05505 PF03796 DnaB-like helicase C terminal domain LIN97_RS05530 PF01066 CDP-alcohol phosphatidyltransferase LIN97_RS05535 PF01053 Cys/Met metabolism PLP-dependent enzyme LIN97_RS05540 PF13609 Gram-negative porin LIN97_RS05550 PF00684 DnaJ central domain LIN97_RS05550 PF01556 DnaJ C terminal domain LIN97_RS05550 PF00226 DnaJ domain LIN97_RS05555 PF00012 Hsp70 protein LIN97_RS05560 PF06097 Bacterial protein of unknown function (DUF945) LIN97_RS05565 PF00750 tRNA synthetases class I (R) LIN97_RS05565 PF05746 DALR anticodon binding domain LIN97_RS05565 PF03485 Arginyl tRNA synthetase N terminal domain LIN97_RS05570 PF06185 YecM protein LIN97_RS05575 PF05433 Glycine zipper 2TM domain LIN97_RS05580 PF00472 RF-1 domain LIN97_RS05580 PF03462 PCRF domain LIN97_RS05585 PF17827 PrmC N-terminal domain LIN97_RS05585 PF13847 Methyltransferase domain LIN97_RS05590 PF00793 DAHP synthetase I family LIN97_RS05595 PF00877 NlpC/P60 family LIN97_RS05600 PF05166 YcgL domain LIN97_RS05605 PF05209 Septum formation inhibitor MinC, N-terminal domain LIN97_RS05605 PF03775 Septum formation inhibitor MinC, C-terminal domain LIN97_RS05615 PF00300 Histidine phosphatase superfamily (branch 1) LIN97_RS05620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LIN97_RS05620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LIN97_RS05620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LIN97_RS05620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LIN97_RS05625 PF00809 Pterin binding enzyme LIN97_RS05630 PF11798 IMS family HHH motif LIN97_RS05630 PF00817 impB/mucB/samB family LIN97_RS05675 PF13333 Integrase core domain LIN97_RS05675 PF00665 Integrase core domain LIN97_RS05685 PF00478 IMP dehydrogenase / GMP reductase domain LIN97_RS05685 PF00571 CBS domain LIN97_RS05690 PF03099 Biotin/lipoate A/B protein ligase family LIN97_RS05690 PF02237 Biotin protein ligase C terminal domain LIN97_RS05720 PF00005 ABC transporter LIN97_RS05725 PF00005 ABC transporter LIN97_RS05725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIN97_RS05730 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS05730 PF12911 N-terminal TM domain of oligopeptide transport permease C LIN97_RS05735 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS05740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIN97_RS05745 PF04317 YcjX-like family, DUF463 LIN97_RS05750 PF05128 Domain of unknown function (DUF697) LIN97_RS05755 PF18024 Helix-turn-helix domain LIN97_RS05755 PF00158 Sigma-54 interaction domain LIN97_RS05760 PF17209 Hfq protein LIN97_RS05770 PF08676 MutL C terminal dimerisation domain LIN97_RS05770 PF01119 DNA mismatch repair protein, C-terminal domain LIN97_RS05775 PF01476 LysM domain LIN97_RS05775 PF01520 N-acetylmuramoyl-L-alanine amidase LIN97_RS05780 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LIN97_RS05790 PF04138 GtrA-like protein LIN97_RS05795 PF00535 Glycosyl transferase family 2 LIN97_RS05800 PF17284 Spermidine synthase tetramerisation domain LIN97_RS05810 PF00884 Sulfatase LIN97_RS05820 PF00929 Exonuclease LIN97_RS05825 PF03193 RsgA GTPase LIN97_RS05830 PF00381 PTS HPr component phosphorylation site LIN97_RS05835 PF00391 PEP-utilising enzyme, mobile domain LIN97_RS05835 PF05524 PEP-utilising enzyme, N-terminal LIN97_RS05835 PF02896 PEP-utilising enzyme, TIM barrel domain LIN97_RS05840 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIN97_RS05845 PF01432 Peptidase family M3 LIN97_RS05850 PF04304 Protein of unknown function (DUF454) LIN97_RS05855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIN97_RS05860 PF01063 Amino-transferase class IV LIN97_RS05865 PF00425 chorismate binding enzyme LIN97_RS05870 PF00117 Glutamine amidotransferase class-I LIN97_RS05875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIN97_RS05875 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIN97_RS05880 PF02687 FtsX-like permease family LIN97_RS05880 PF12704 MacB-like periplasmic core domain LIN97_RS05885 PF00005 ABC transporter LIN97_RS05890 PF02687 FtsX-like permease family LIN97_RS05890 PF12704 MacB-like periplasmic core domain LIN97_RS05895 PF00793 DAHP synthetase I family LIN97_RS05900 PF00772 DnaB-like helicase N terminal domain LIN97_RS05900 PF03796 DnaB-like helicase C terminal domain LIN97_RS05905 PF01168 Alanine racemase, N-terminal domain LIN97_RS05905 PF00842 Alanine racemase, C-terminal domain LIN97_RS05910 PF00342 Phosphoglucose isomerase LIN97_RS05915 PF00885 6,7-dimethyl-8-ribityllumazine synthase LIN97_RS05920 PF01029 NusB family LIN97_RS05925 PF02769 AIR synthase related protein, C-terminal domain LIN97_RS05925 PF00586 AIR synthase related protein, N-terminal domain LIN97_RS05930 PF04608 Phosphatidylglycerophosphatase A LIN97_RS05935 PF01810 LysE type translocator LIN97_RS05940 PF01113 Dihydrodipicolinate reductase, N-terminus LIN97_RS05940 PF05173 Dihydrodipicolinate reductase, C-terminus LIN97_RS05945 PF00111 2Fe-2S iron-sulfur cluster binding domain LIN97_RS05955 PF00268 Ribonucleotide reductase, small chain LIN97_RS05970 PF02867 Ribonucleotide reductase, barrel domain LIN97_RS05970 PF03477 ATP cone domain LIN97_RS05970 PF00317 Ribonucleotide reductase, all-alpha domain LIN97_RS05975 PF18766 SWI2/SNF2 ATPase LIN97_RS05975 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LIN97_RS05975 PF12008 Type I restriction and modification enzyme - subunit R C terminal LIN97_RS05985 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS05990 PF08402 TOBE domain LIN97_RS05990 PF00005 ABC transporter LIN97_RS05995 PF00128 Alpha amylase, catalytic domain LIN97_RS06000 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS06005 PF14785 Maltose transport system permease protein MalF P2 domain LIN97_RS06005 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS06010 PF01547 Bacterial extracellular solute-binding protein LIN97_RS06015 PF17912 MalK OB fold domain LIN97_RS06015 PF00005 ABC transporter LIN97_RS06020 PF02264 LamB porin LIN97_RS06025 PF07148 Maltose operon periplasmic protein precursor (MalM) LIN97_RS06030 PF00899 ThiF family LIN97_RS06035 PF03454 MoeA C-terminal region (domain IV) LIN97_RS06035 PF03453 MoeA N-terminal region (domain I and II) LIN97_RS06035 PF00994 Probable molybdopterin binding domain LIN97_RS06040 PF01227 GTP cyclohydrolase I LIN97_RS06045 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LIN97_RS06050 PF03449 Transcription elongation factor, N-terminal LIN97_RS06050 PF01272 Transcription elongation factor, GreA/GreB, C-term LIN97_RS06055 PF01985 CRS1 / YhbY (CRM) domain LIN97_RS06060 PF05973 Phage derived protein Gp49-like (DUF891) LIN97_RS06065 PF01381 Helix-turn-helix LIN97_RS06070 PF00677 Lumazine binding domain LIN97_RS06075 PF01554 MatE LIN97_RS06080 PF04073 Aminoacyl-tRNA editing domain LIN97_RS06095 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS06100 PF00005 ABC transporter LIN97_RS06105 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LIN97_RS06105 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LIN97_RS06110 PF01523 Putative modulator of DNA gyrase LIN97_RS06115 PF00207 Alpha-2-macroglobulin family LIN97_RS06115 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LIN97_RS06115 PF01835 MG2 domain LIN97_RS06115 PF17962 Bacterial macroglobulin domain 6 LIN97_RS06115 PF07703 Alpha-2-macroglobulin bait region domain LIN97_RS06115 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LIN97_RS06115 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LIN97_RS06120 PF03601 Conserved hypothetical protein 698 LIN97_RS06125 PF00905 Penicillin binding protein transpeptidase domain LIN97_RS06125 PF00912 Transglycosylase LIN97_RS06125 PF06832 Penicillin-Binding Protein C-terminus Family LIN97_RS06130 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LIN97_RS06135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIN97_RS06140 PF03611 PTS system sugar-specific permease component LIN97_RS06150 PF00455 DeoR C terminal sensor domain LIN97_RS06150 PF08220 DeoR-like helix-turn-helix domain LIN97_RS06155 PF01261 Xylose isomerase-like TIM barrel LIN97_RS06160 PF00596 Class II Aldolase and Adducin N-terminal domain LIN97_RS06165 PF03222 Tryptophan/tyrosine permease family LIN97_RS06170 PF16353 Domain of unknown function(DUF4981) LIN97_RS06170 PF00703 Glycosyl hydrolases family 2 LIN97_RS06170 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LIN97_RS06170 PF02837 Glycosyl hydrolases family 2, sugar binding domain LIN97_RS06170 PF02929 Beta galactosidase small chain LIN97_RS06175 PF00462 Glutaredoxin LIN97_RS06180 PF00881 Nitroreductase family LIN97_RS06185 PF08443 RimK-like ATP-grasp domain LIN97_RS06185 PF18030 RimK PreATP-grasp domain LIN97_RS06195 PF16036 Chalcone isomerase-like LIN97_RS06200 PF10415 Fumarase C C-terminus LIN97_RS06200 PF00206 Lyase LIN97_RS06205 PF04364 DNA polymerase III chi subunit, HolC LIN97_RS06220 PF08264 Anticodon-binding domain of tRNA LIN97_RS06220 PF00133 tRNA synthetases class I (I, L, M and V) LIN97_RS06220 PF10458 Valyl tRNA synthetase tRNA binding arm LIN97_RS06240 PF07804 HipA-like C-terminal domain LIN97_RS06240 PF13657 HipA N-terminal domain LIN97_RS06250 PF07690 Major Facilitator Superfamily LIN97_RS06255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LIN97_RS06255 PF00529 HlyD membrane-fusion protein of T1SS LIN97_RS06260 PF00210 Ferritin-like domain LIN97_RS06265 PF00575 S1 RNA binding domain LIN97_RS06265 PF00773 RNB domain LIN97_RS06265 PF08206 Ribonuclease B OB domain LIN97_RS06275 PF01784 NIF3 (NGG1p interacting factor 3) LIN97_RS06280 PF04055 Radical SAM superfamily LIN97_RS06285 PF01242 6-pyruvoyl tetrahydropterin synthase LIN97_RS06290 PF01336 OB-fold nucleic acid binding domain LIN97_RS06290 PF00152 tRNA synthetases class II (D, K and N) LIN97_RS06300 PF10411 Disulfide bond isomerase protein N-terminus LIN97_RS06300 PF13098 Thioredoxin-like domain LIN97_RS06305 PF17768 RecJ OB domain LIN97_RS06305 PF02272 DHHA1 domain LIN97_RS06305 PF01368 DHH family LIN97_RS06315 PF01048 Phosphorylase superfamily LIN97_RS06320 PF10670 Domain of unknown function (DUF4198) LIN97_RS06330 PF01891 Cobalt uptake substrate-specific transmembrane region LIN97_RS06340 PF00005 ABC transporter LIN97_RS06345 PF02492 CobW/HypB/UreG, nucleotide-binding domain LIN97_RS06350 PF01924 Hydrogenase formation hypA family LIN97_RS06355 PF02769 AIR synthase related protein, C-terminal domain LIN97_RS06355 PF00586 AIR synthase related protein, N-terminal domain LIN97_RS06365 PF08501 Shikimate dehydrogenase substrate binding domain LIN97_RS06370 PF02219 Methylenetetrahydrofolate reductase LIN97_RS06375 PF03739 Lipopolysaccharide export system permease LptF/LptG LIN97_RS06380 PF03739 Lipopolysaccharide export system permease LptF/LptG LIN97_RS06385 PF02789 Cytosol aminopeptidase family, N-terminal domain LIN97_RS06385 PF00883 Cytosol aminopeptidase family, catalytic domain LIN97_RS06390 PF00005 ABC transporter LIN97_RS06390 PF03459 TOBE domain LIN97_RS06395 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS06405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIN97_RS06405 PF03459 TOBE domain LIN97_RS06410 PF00939 Sodium:sulfate symporter transmembrane region LIN97_RS06420 PF13180 PDZ domain LIN97_RS06425 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LIN97_RS06425 PF01872 RibD C-terminal domain LIN97_RS06430 PF03477 ATP cone domain LIN97_RS06435 PF01728 FtsJ-like methyltransferase LIN97_RS06435 PF18125 RlmM ferredoxin-like domain LIN97_RS06440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIN97_RS06440 PF03466 LysR substrate binding domain LIN97_RS06445 PF01063 Amino-transferase class IV LIN97_RS06455 PF00056 lactate/malate dehydrogenase, NAD binding domain LIN97_RS06455 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LIN97_RS06460 PF02863 Arginine repressor, C-terminal domain LIN97_RS06460 PF01316 Arginine repressor, DNA binding domain LIN97_RS06465 PF01370 NAD dependent epimerase/dehydratase family LIN97_RS06465 PF08338 Domain of unknown function (DUF1731) LIN97_RS06470 PF02508 Rnf-Nqr subunit, membrane protein LIN97_RS06475 PF04060 Putative Fe-S cluster LIN97_RS06480 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LIN97_RS06480 PF12838 4Fe-4S dicluster domain LIN97_RS06480 PF13375 RnfC Barrel sandwich hybrid domain LIN97_RS06485 PF03116 NQR2, RnfD, RnfE family LIN97_RS06490 PF04205 FMN-binding domain LIN97_RS06495 PF02508 Rnf-Nqr subunit, membrane protein LIN97_RS06500 PF10576 Iron-sulfur binding domain of endonuclease III LIN97_RS06500 PF00730 HhH-GPD superfamily base excision DNA repair protein LIN97_RS06500 PF00633 Helix-hairpin-helix motif LIN97_RS06505 PF00209 Sodium:neurotransmitter symporter family LIN97_RS06510 PF00950 ABC 3 transport family LIN97_RS06515 PF00005 ABC transporter LIN97_RS06520 PF04225 Opacity-associated protein A LysM-like domain LIN97_RS06520 PF01551 Peptidase family M23 LIN97_RS06525 PF00005 ABC transporter LIN97_RS06530 PF01032 FecCD transport family LIN97_RS06535 PF01032 FecCD transport family LIN97_RS06540 PF01497 Periplasmic binding protein LIN97_RS06545 PF00149 Calcineurin-like phosphoesterase LIN97_RS06545 PF02872 5'-nucleotidase, C-terminal domain LIN97_RS06550 PF04216 Protein involved in formate dehydrogenase formation LIN97_RS06555 PF04076 Bacterial OB fold (BOF) protein LIN97_RS06580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIN97_RS06580 PF08521 Two-component sensor kinase N-terminal LIN97_RS06580 PF00512 His Kinase A (phospho-acceptor) domain LIN97_RS06590 PF10688 Bacterial inner membrane protein LIN97_RS06595 PF00764 Arginosuccinate synthase LIN97_RS06600 PF01370 NAD dependent epimerase/dehydratase family LIN97_RS06605 PF03144 Elongation factor Tu domain 2 LIN97_RS06605 PF16658 Class II release factor RF3, C-terminal domain LIN97_RS06605 PF00009 Elongation factor Tu GTP binding domain LIN97_RS06610 PF05973 Phage derived protein Gp49-like (DUF891) LIN97_RS06620 PF08335 GlnD PII-uridylyltransferase LIN97_RS06620 PF03710 Glutamate-ammonia ligase adenylyltransferase LIN97_RS06635 PF09704 CRISPR-associated protein (Cas_Cas5) LIN97_RS06655 PF02463 RecF/RecN/SMC N terminal domain LIN97_RS06660 PF01867 CRISPR associated protein Cas1 LIN97_RS06665 PF09827 CRISPR associated protein Cas2 LIN97_RS06680 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS06685 PF00005 ABC transporter LIN97_RS06690 PF06968 Biotin and Thiamin Synthesis associated domain LIN97_RS06690 PF04055 Radical SAM superfamily LIN97_RS06695 PF00595 PDZ domain LIN97_RS06700 PF06295 Protein of unknown function (DUF1043) LIN97_RS06705 PF18381 YcaO cyclodehydratase C-terminal domain LIN97_RS06705 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LIN97_RS06710 PF01238 Phosphomannose isomerase type I LIN97_RS06715 PF07411 Domain of unknown function (DUF1508) LIN97_RS06720 PF00367 phosphotransferase system, EIIB LIN97_RS06720 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIN97_RS06720 PF02378 Phosphotransferase system, EIIC LIN97_RS06730 PF16123 Hydroxyacylglutathione hydrolase C-terminus LIN97_RS06730 PF00753 Metallo-beta-lactamase superfamily LIN97_RS06735 PF01488 Shikimate / quinate 5-dehydrogenase LIN97_RS06735 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LIN97_RS06735 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LIN97_RS06740 PF00480 ROK family LIN97_RS06740 PF01047 MarR family LIN97_RS06765 PF05191 Adenylate kinase, active site lid LIN97_RS06770 PF07690 Major Facilitator Superfamily LIN97_RS06775 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LIN97_RS06780 PF01370 NAD dependent epimerase/dehydratase family LIN97_RS06785 PF05656 Protein of unknown function (DUF805) LIN97_RS06790 PF00860 Permease family LIN97_RS06795 PF01171 PP-loop family LIN97_RS06795 PF09179 TilS substrate binding domain LIN97_RS06795 PF11734 TilS substrate C-terminal domain LIN97_RS06800 PF08543 Phosphomethylpyrimidine kinase LIN97_RS06805 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LIN97_RS06810 PF00576 HIUase/Transthyretin family LIN97_RS06845 PF00717 Peptidase S24-like LIN97_RS06845 PF01726 LexA DNA binding domain LIN97_RS06865 PF02824 TGS domain LIN97_RS06865 PF04607 Region found in RelA / SpoT proteins LIN97_RS06865 PF13291 ACT domain LIN97_RS06895 PF02540 NAD synthase LIN97_RS06895 PF00117 Glutamine amidotransferase class-I LIN97_RS06895 PF00958 GMP synthase C terminal domain LIN97_RS06900 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LIN97_RS06905 PF04221 RelB antitoxin LIN97_RS06910 PF03606 C4-dicarboxylate anaerobic carrier LIN97_RS06920 PF17384 RimP C-terminal SH3 domain LIN97_RS06920 PF02576 RimP N-terminal domain LIN97_RS06925 PF00575 S1 RNA binding domain LIN97_RS06925 PF08529 NusA N-terminal domain LIN97_RS06925 PF13184 NusA-like KH domain LIN97_RS06930 PF08364 Bacterial translation initiation factor IF-2 associated region LIN97_RS06930 PF04760 Translation initiation factor IF-2, N-terminal region LIN97_RS06930 PF11987 Translation-initiation factor 2 LIN97_RS06930 PF00009 Elongation factor Tu GTP binding domain LIN97_RS06935 PF18273 Type III R-M EcoP15I C-terminal domain LIN97_RS06935 PF01555 DNA methylase LIN97_RS06940 PF00176 SNF2 family N-terminal domain LIN97_RS06940 PF00271 Helicase conserved C-terminal domain LIN97_RS06945 PF02033 Ribosome-binding factor A LIN97_RS06950 PF16198 tRNA pseudouridylate synthase B C-terminal domain LIN97_RS06950 PF09157 Pseudouridine synthase II TruB, C-terminal LIN97_RS06950 PF01509 TruB family pseudouridylate synthase (N terminal domain) LIN97_RS06960 PF00579 tRNA synthetases class I (W and Y) LIN97_RS06960 PF01479 S4 domain LIN97_RS06965 PF17746 SfsA N-terminal OB domain LIN97_RS06965 PF03749 Sugar fermentation stimulation protein RE domain LIN97_RS06970 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LIN97_RS06970 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LIN97_RS06970 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LIN97_RS06975 PF02233 NAD(P) transhydrogenase beta subunit LIN97_RS06985 PF12728 Helix-turn-helix domain LIN97_RS06985 PF02661 Fic/DOC family LIN97_RS06990 PF00586 AIR synthase related protein, N-terminal domain LIN97_RS06990 PF02769 AIR synthase related protein, C-terminal domain LIN97_RS07000 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS07005 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS07015 PF08459 UvrC Helix-hairpin-helix N-terminal LIN97_RS07015 PF02151 UvrB/uvrC motif LIN97_RS07015 PF01541 GIY-YIG catalytic domain LIN97_RS07020 PF02348 Cytidylyltransferase LIN97_RS07025 PF03966 Trm112p-like protein LIN97_RS07030 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LIN97_RS07035 PF00005 ABC transporter LIN97_RS07035 PF00664 ABC transporter transmembrane region LIN97_RS07040 PF00753 Metallo-beta-lactamase superfamily LIN97_RS07040 PF13567 Domain of unknown function (DUF4131) LIN97_RS07040 PF03772 Competence protein LIN97_RS07045 PF01258 Prokaryotic dksA/traR C4-type zinc finger LIN97_RS07050 PF12626 Polymerase A arginine-rich C-terminus LIN97_RS07050 PF12627 Probable RNA and SrmB- binding site of polymerase A LIN97_RS07050 PF01743 Poly A polymerase head domain LIN97_RS07055 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LIN97_RS07065 PF07085 DRTGG domain LIN97_RS07065 PF01515 Phosphate acetyl/butaryl transferase LIN97_RS07070 PF00871 Acetokinase family LIN97_RS07075 PF04217 Protein of unknown function, DUF412 LIN97_RS07080 PF02674 Colicin V production protein LIN97_RS07085 PF02446 4-alpha-glucanotransferase LIN97_RS07090 PF00343 Carbohydrate phosphorylase LIN97_RS07095 PF00196 Bacterial regulatory proteins, luxR family LIN97_RS07095 PF17874 MalT-like TPR region LIN97_RS07100 PF03848 Tellurite resistance protein TehB LIN97_RS07100 PF09313 Domain of unknown function (DUF1971) LIN97_RS07105 PF00456 Transketolase, thiamine diphosphate binding domain LIN97_RS07105 PF17831 Pyruvate dehydrogenase E1 component middle domain LIN97_RS07110 PF02817 e3 binding domain LIN97_RS07110 PF00364 Biotin-requiring enzyme LIN97_RS07110 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LIN97_RS07115 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIN97_RS07115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIN97_RS07120 PF00881 Nitroreductase family LIN97_RS07125 PF01343 Peptidase family S49 LIN97_RS07135 PF01300 Telomere recombination LIN97_RS07140 PF01479 S4 domain LIN97_RS07140 PF00849 RNA pseudouridylate synthase LIN97_RS07145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIN97_RS07145 PF03466 LysR substrate binding domain LIN97_RS07150 PF00132 Bacterial transferase hexapeptide (six repeats) LIN97_RS07150 PF14602 Hexapeptide repeat of succinyl-transferase LIN97_RS07150 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LIN97_RS07155 PF04269 Protein of unknown function, DUF440 LIN97_RS07160 PF00356 Bacterial regulatory proteins, lacI family LIN97_RS07165 PF00561 alpha/beta hydrolase fold LIN97_RS07170 PF02698 DUF218 domain LIN97_RS07175 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LIN97_RS07175 PF00356 Bacterial regulatory proteins, lacI family LIN97_RS07190 PF08534 Redoxin LIN97_RS07195 PF02683 Cytochrome C biogenesis protein transmembrane region LIN97_RS07200 PF01625 Peptide methionine sulfoxide reductase LIN97_RS07200 PF01641 SelR domain LIN97_RS07205 PF00484 Carbonic anhydrase LIN97_RS07210 PF04972 BON domain LIN97_RS07215 PF13580 SIS domain LIN97_RS07220 PF02021 Uncharacterised protein family UPF0102 LIN97_RS07225 PF04348 LppC putative lipoprotein LIN97_RS07230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIN97_RS07235 PF01266 FAD dependent oxidoreductase LIN97_RS07235 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LIN97_RS07240 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIN97_RS07250 PF01343 Peptidase family S49 LIN97_RS07250 PF08496 Peptidase family S49 N-terminal LIN97_RS07255 PF00691 OmpA family LIN97_RS07255 PF05736 OprF membrane domain LIN97_RS07260 PF03881 Fructosamine kinase LIN97_RS07265 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LIN97_RS07265 PF02824 TGS domain LIN97_RS07265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIN97_RS07265 PF03129 Anticodon binding domain LIN97_RS07270 PF18273 Type III R-M EcoP15I C-terminal domain LIN97_RS07270 PF01555 DNA methylase LIN97_RS07285 PF00175 Oxidoreductase NAD-binding domain LIN97_RS07285 PF00970 Oxidoreductase FAD-binding domain LIN97_RS07290 PF05198 Translation initiation factor IF-3, N-terminal domain LIN97_RS07290 PF00707 Translation initiation factor IF-3, C-terminal domain LIN97_RS07295 PF01632 Ribosomal protein L35 LIN97_RS07300 PF00453 Ribosomal protein L20 LIN97_RS07305 PF01791 DeoC/LacD family aldolase LIN97_RS07310 PF08013 Tagatose 6 phosphate kinase LIN97_RS07315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIN97_RS07320 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIN97_RS07325 PF03611 PTS system sugar-specific permease component LIN97_RS07335 PF00107 Zinc-binding dehydrogenase LIN97_RS07335 PF08240 Alcohol dehydrogenase GroES-like domain LIN97_RS07340 PF08220 DeoR-like helix-turn-helix domain LIN97_RS07340 PF00455 DeoR C terminal sensor domain LIN97_RS07345 PF02780 Transketolase, C-terminal domain LIN97_RS07345 PF02779 Transketolase, pyrimidine binding domain LIN97_RS07345 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LIN97_RS07350 PF00348 Polyprenyl synthetase LIN97_RS07355 PF02609 Exonuclease VII small subunit LIN97_RS07360 PF01039 Carboxyl transferase domain LIN97_RS07360 PF17848 Acetyl-coA carboxylase zinc finger domain LIN97_RS07365 PF08245 Mur ligase middle domain LIN97_RS07370 PF00300 Histidine phosphatase superfamily (branch 1) LIN97_RS07375 PF13396 Phospholipase_D-nuclease N-terminal LIN97_RS07375 PF13091 PLD-like domain LIN97_RS07380 PF03956 Lysine exporter LysO LIN97_RS07385 PF00849 RNA pseudouridylate synthase LIN97_RS07395 PF03831 PhnA domain LIN97_RS07395 PF08274 PhnA Zinc-Ribbon LIN97_RS07425 PF02321 Outer membrane efflux protein LIN97_RS07430 PF02687 FtsX-like permease family LIN97_RS07430 PF12704 MacB-like periplasmic core domain LIN97_RS07430 PF00005 ABC transporter LIN97_RS07435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LIN97_RS07440 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LIN97_RS07440 PF00749 tRNA synthetases class I (E and Q), catalytic domain LIN97_RS07455 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LIN97_RS07455 PF00128 Alpha amylase, catalytic domain LIN97_RS07455 PF02806 Alpha amylase, C-terminal all-beta domain LIN97_RS07460 PF00128 Alpha amylase, catalytic domain LIN97_RS07460 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LIN97_RS07460 PF18390 Glycogen debranching enzyme C-terminal domain LIN97_RS07465 PF00483 Nucleotidyl transferase LIN97_RS07470 PF00534 Glycosyl transferases group 1 LIN97_RS07470 PF08323 Starch synthase catalytic domain LIN97_RS07475 PF00343 Carbohydrate phosphorylase LIN97_RS07480 PF09335 SNARE associated Golgi protein LIN97_RS07485 PF01386 Ribosomal L25p family LIN97_RS07495 PF00768 D-alanyl-D-alanine carboxypeptidase LIN97_RS07500 PF03882 MukF winged-helix domain LIN97_RS07500 PF17192 MukF middle domain LIN97_RS07500 PF17193 MukF C-terminal domain LIN97_RS07510 PF00501 AMP-binding enzyme LIN97_RS07510 PF01553 Acyltransferase LIN97_RS07510 PF13193 AMP-binding enzyme C-terminal domain LIN97_RS07515 PF04288 MukE-like family LIN97_RS07520 PF16330 MukB hinge domain LIN97_RS07520 PF04310 MukB N-terminal LIN97_RS07530 PF00929 Exonuclease LIN97_RS07530 PF08411 Exonuclease C-terminal LIN97_RS07550 PF00210 Ferritin-like domain LIN97_RS07555 PF00210 Ferritin-like domain LIN97_RS07565 PF13545 Crp-like helix-turn-helix domain LIN97_RS07565 PF00027 Cyclic nucleotide-binding domain LIN97_RS07570 PF00582 Universal stress protein family LIN97_RS07575 PF10670 Domain of unknown function (DUF4198) LIN97_RS07580 PF01396 Topoisomerase DNA binding C4 zinc finger LIN97_RS07580 PF01131 DNA topoisomerase LIN97_RS07580 PF01751 Toprim domain LIN97_RS07580 PF08272 Topoisomerase I zinc-ribbon-like LIN97_RS07585 PF02811 PHP domain LIN97_RS07590 PF01180 Dihydroorotate dehydrogenase LIN97_RS07595 PF01433 Peptidase family M1 domain LIN97_RS07595 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LIN97_RS07595 PF11940 Domain of unknown function (DUF3458) Ig-like fold LIN97_RS07600 PF00155 Aminotransferase class I and II LIN97_RS07610 PF13533 Biotin-lipoyl like LIN97_RS07615 PF00005 ABC transporter LIN97_RS07630 PF01032 FecCD transport family LIN97_RS07635 PF00005 ABC transporter LIN97_RS07640 PF01497 Periplasmic binding protein LIN97_RS07645 PF03459 TOBE domain LIN97_RS07650 PF07715 TonB-dependent Receptor Plug Domain LIN97_RS07650 PF00593 TonB dependent receptor LIN97_RS07655 PF07715 TonB-dependent Receptor Plug Domain LIN97_RS07655 PF00593 TonB dependent receptor LIN97_RS07660 PF07715 TonB-dependent Receptor Plug Domain LIN97_RS07660 PF00593 TonB dependent receptor LIN97_RS07665 PF00005 ABC transporter LIN97_RS07670 PF01032 FecCD transport family LIN97_RS07675 PF01497 Periplasmic binding protein LIN97_RS07695 PF01171 PP-loop family LIN97_RS07700 PF00877 NlpC/P60 family LIN97_RS07705 PF00216 Bacterial DNA-binding protein LIN97_RS07710 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LIN97_RS07710 PF01588 Putative tRNA binding domain LIN97_RS07710 PF03147 Ferredoxin-fold anticodon binding domain LIN97_RS07710 PF03484 tRNA synthetase B5 domain LIN97_RS07710 PF03483 B3/4 domain LIN97_RS07715 PF01409 tRNA synthetases class II core domain (F) LIN97_RS07715 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LIN97_RS07720 PF01435 Peptidase family M48 LIN97_RS07730 PF01380 SIS domain LIN97_RS07730 PF00571 CBS domain LIN97_RS07740 PF04715 Anthranilate synthase component I, N terminal region LIN97_RS07740 PF00425 chorismate binding enzyme LIN97_RS07745 PF00117 Glutamine amidotransferase class-I LIN97_RS07750 PF14552 Tautomerase enzyme LIN97_RS07755 PF02885 Glycosyl transferase family, helical bundle domain LIN97_RS07755 PF00591 Glycosyl transferase family, a/b domain LIN97_RS07765 PF01381 Helix-turn-helix LIN97_RS07770 PF00218 Indole-3-glycerol phosphate synthase LIN97_RS07770 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LIN97_RS07775 PF01455 HupF/HypC family LIN97_RS07790 PF04277 Oxaloacetate decarboxylase, gamma chain LIN97_RS07795 PF00364 Biotin-requiring enzyme LIN97_RS07795 PF00682 HMGL-like LIN97_RS07795 PF02436 Conserved carboxylase domain LIN97_RS07800 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit LIN97_RS07805 PF00593 TonB dependent receptor LIN97_RS07805 PF07715 TonB-dependent Receptor Plug Domain LIN97_RS07830 PF02914 Bacteriophage Mu transposase LIN97_RS07830 PF02316 Mu DNA-binding domain LIN97_RS07830 PF09039 Mu DNA binding, I gamma subdomain LIN97_RS07830 PF09299 Mu transposase, C-terminal LIN97_RS07835 PF13693 Winged helix-turn-helix DNA-binding LIN97_RS07840 PF00717 Peptidase S24-like LIN97_RS07840 PF01381 Helix-turn-helix LIN97_RS07860 PF00291 Pyridoxal-phosphate dependent enzyme LIN97_RS07865 PF00290 Tryptophan synthase alpha chain LIN97_RS07870 PF02867 Ribonucleotide reductase, barrel domain LIN97_RS07870 PF03477 ATP cone domain LIN97_RS07870 PF00317 Ribonucleotide reductase, all-alpha domain LIN97_RS07880 PF00224 Pyruvate kinase, barrel domain LIN97_RS07880 PF02887 Pyruvate kinase, alpha/beta domain LIN97_RS07885 PF03992 Antibiotic biosynthesis monooxygenase LIN97_RS07895 PF13407 Periplasmic binding protein domain LIN97_RS07900 PF02653 Branched-chain amino acid transport system / permease component LIN97_RS07905 PF02653 Branched-chain amino acid transport system / permease component LIN97_RS07915 PF00325 Bacterial regulatory proteins, crp family LIN97_RS07915 PF04198 Putative sugar-binding domain LIN97_RS07920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LIN97_RS07920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LIN97_RS07930 PF00480 ROK family LIN97_RS07935 PF01336 OB-fold nucleic acid binding domain LIN97_RS07935 PF00152 tRNA synthetases class II (D, K and N) LIN97_RS07940 PF04386 Stringent starvation protein B LIN97_RS07945 PF13417 Glutathione S-transferase, N-terminal domain LIN97_RS07945 PF00043 Glutathione S-transferase, C-terminal domain LIN97_RS07950 PF02391 MoaE protein LIN97_RS07955 PF02597 ThiS family LIN97_RS07960 PF01967 MoaC family LIN97_RS07965 PF04055 Radical SAM superfamily LIN97_RS07965 PF06463 Molybdenum Cofactor Synthesis C LIN97_RS07970 PF01933 Uncharacterised protein family UPF0052 LIN97_RS07985 PF02568 Thiamine biosynthesis protein (ThiI) LIN97_RS07985 PF02926 THUMP domain LIN97_RS07990 PF03264 NapC/NirT cytochrome c family, N-terminal region LIN97_RS07995 PF01568 Molydopterin dinucleotide binding domain LIN97_RS07995 PF18364 Molybdopterin oxidoreductase N-terminal domain LIN97_RS07995 PF00384 Molybdopterin oxidoreductase LIN97_RS08000 PF04237 YjbR LIN97_RS08005 PF00939 Sodium:sulfate symporter transmembrane region LIN97_RS08020 PF01416 tRNA pseudouridine synthase LIN97_RS08025 PF00380 Ribosomal protein S9/S16 LIN97_RS08030 PF00572 Ribosomal protein L13 LIN97_RS08040 PF13538 UvrD-like helicase C-terminal domain LIN97_RS08045 PF12705 PD-(D/E)XK nuclease superfamily LIN97_RS08045 PF00580 UvrD/REP helicase N-terminal domain LIN97_RS08045 PF13361 UvrD-like helicase C-terminal domain LIN97_RS08050 PF02635 DsrE/DsrF-like family LIN97_RS08060 PF07977 FabA-like domain LIN97_RS08065 PF05362 Lon protease (S16) C-terminal proteolytic domain LIN97_RS08065 PF13654 AAA domain LIN97_RS08070 PF17414 MatP C-terminal ribbon-helix-helix domain LIN97_RS08070 PF06303 MatP N-terminal domain LIN97_RS08075 PF00313 'Cold-shock' DNA-binding domain LIN97_RS08080 PF03701 Uncharacterised protein family (UPF0181) LIN97_RS08085 PF00849 RNA pseudouridylate synthase LIN97_RS08090 PF04287 tRNA pseudouridine synthase C LIN97_RS08095 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) LIN97_RS08100 PF14489 QueF-like protein LIN97_RS08100 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LIN97_RS08105 PF02954 Bacterial regulatory protein, Fis family LIN97_RS08105 PF14532 Sigma-54 interaction domain LIN97_RS08105 PF00072 Response regulator receiver domain LIN97_RS08110 PF00486 Transcriptional regulatory protein, C terminal LIN97_RS08110 PF00072 Response regulator receiver domain LIN97_RS08115 PF00512 His Kinase A (phospho-acceptor) domain LIN97_RS08115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIN97_RS08115 PF00672 HAMP domain LIN97_RS08130 PF04315 Elongation factor P hydroxylase LIN97_RS08135 PF01434 Peptidase family M41 LIN97_RS08135 PF06480 FtsH Extracellular LIN97_RS08135 PF00004 ATPase family associated with various cellular activities (AAA) LIN97_RS08135 PF17862 AAA+ lid domain LIN97_RS08140 PF01728 FtsJ-like methyltransferase LIN97_RS08145 PF01842 ACT domain LIN97_RS08145 PF00551 Formyl transferase LIN97_RS08150 PF00816 H-NS histone family LIN97_RS08155 PF03553 Na+/H+ antiporter family LIN97_RS08185 PF01177 Asp/Glu/Hydantoin racemase LIN97_RS08190 PF04345 Chorismate lyase LIN97_RS08195 PF00270 DEAD/DEAH box helicase LIN97_RS08195 PF00271 Helicase conserved C-terminal domain LIN97_RS08195 PF17191 RecG wedge domain LIN97_RS08200 PF13291 ACT domain LIN97_RS08200 PF02824 TGS domain LIN97_RS08200 PF04607 Region found in RelA / SpoT proteins LIN97_RS08205 PF01192 RNA polymerase Rpb6 LIN97_RS08210 PF00625 Guanylate kinase LIN97_RS08215 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LIN97_RS08215 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LIN97_RS08220 PF00892 EamA-like transporter family LIN97_RS08225 PF03364 Polyketide cyclase / dehydrase and lipid transport LIN97_RS08230 PF03658 RnfH family Ubiquitin LIN97_RS08235 PF08007 Cupin superfamily protein LIN97_RS08240 PF13742 OB-fold nucleic acid binding domain LIN97_RS08240 PF02601 Exonuclease VII, large subunit LIN97_RS08245 PF03668 P-loop ATPase protein family LIN97_RS08250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIN97_RS08255 PF12399 Branched-chain amino acid ATP-binding cassette transporter LIN97_RS08255 PF00005 ABC transporter LIN97_RS08260 PF03968 OstA-like protein LIN97_RS08265 PF06835 Lipopolysaccharide-assembly, LptC-related LIN97_RS08270 PF00005 ABC transporter LIN97_RS08275 PF02405 Permease MlaE LIN97_RS08280 PF02470 MlaD protein LIN97_RS08285 PF05494 MlaC protein LIN97_RS08290 PF13466 STAS domain LIN97_RS08295 PF01722 BolA-like protein LIN97_RS08300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LIN97_RS08310 PF00664 ABC transporter transmembrane region LIN97_RS08310 PF00005 ABC transporter LIN97_RS08310 PF03412 Peptidase C39 family LIN97_RS08315 PF00535 Glycosyl transferase family 2 LIN97_RS08325 PF04175 Protein of unknown function (DUF406) LIN97_RS08330 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LIN97_RS08335 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LIN97_RS08335 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LIN97_RS08340 PF02976 DNA mismatch repair enzyme MutH LIN97_RS08345 PF03741 Integral membrane protein TerC family LIN97_RS08355 PF13276 HTH-like domain LIN97_RS08355 PF00665 Integrase core domain LIN97_RS08355 PF13333 Integrase core domain LIN97_RS08360 PF03951 Glutamine synthetase, beta-Grasp domain LIN97_RS08360 PF00120 Glutamine synthetase, catalytic domain LIN97_RS08365 PF00679 Elongation factor G C-terminus LIN97_RS08365 PF00009 Elongation factor Tu GTP binding domain LIN97_RS08365 PF03144 Elongation factor Tu domain 2 LIN97_RS08370 PF03797 Autotransporter beta-domain LIN97_RS08370 PF02395 Immunoglobulin A1 protease LIN97_RS08370 PF03212 Pertactin LIN97_RS08375 PF00578 AhpC/TSA family LIN97_RS08380 PF00701 Dihydrodipicolinate synthetase family LIN97_RS08390 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS08395 PF00005 ABC transporter LIN97_RS08395 PF00571 CBS domain LIN97_RS08400 PF01168 Alanine racemase, N-terminal domain LIN97_RS08410 PF01842 ACT domain LIN97_RS08410 PF03447 Homoserine dehydrogenase, NAD binding domain LIN97_RS08410 PF00696 Amino acid kinase family LIN97_RS08410 PF13840 ACT domain LIN97_RS08410 PF00742 Homoserine dehydrogenase LIN97_RS08415 PF00288 GHMP kinases N terminal domain LIN97_RS08415 PF08544 GHMP kinases C terminal LIN97_RS08425 PF14821 Threonine synthase N terminus LIN97_RS08425 PF00291 Pyridoxal-phosphate dependent enzyme LIN97_RS08430 PF01648 4'-phosphopantetheinyl transferase superfamily LIN97_RS08435 PF01145 SPFH domain / Band 7 family LIN97_RS08440 PF01145 SPFH domain / Band 7 family LIN97_RS08450 PF01725 Ham1 family LIN97_RS08455 PF01906 Putative heavy-metal-binding LIN97_RS08460 PF06969 HemN C-terminal domain LIN97_RS08460 PF04055 Radical SAM superfamily LIN97_RS08465 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LIN97_RS08470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIN97_RS08470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIN97_RS08475 PF01497 Periplasmic binding protein LIN97_RS08480 PF01081 KDPG and KHG aldolase LIN97_RS08485 PF02614 Glucuronate isomerase LIN97_RS08490 PF00106 short chain dehydrogenase LIN97_RS08495 PF00294 pfkB family carbohydrate kinase LIN97_RS08500 PF03480 Bacterial extracellular solute-binding protein, family 7 LIN97_RS08505 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LIN97_RS08510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LIN97_RS08515 PF17137 Domain of unknown function (DUF5110) LIN97_RS08515 PF01055 Glycosyl hydrolases family 31 LIN97_RS08515 PF13802 Galactose mutarotase-like LIN97_RS08515 PF16338 Domain of unknown function (DUF4968) LIN97_RS08520 PF00392 Bacterial regulatory proteins, gntR family LIN97_RS08520 PF07729 FCD domain LIN97_RS08525 PF03786 D-mannonate dehydratase (UxuA) LIN97_RS08540 PF01740 STAS domain LIN97_RS08540 PF00916 Sulfate permease family LIN97_RS08550 PF02190 ATP-dependent protease La (LON) substrate-binding domain LIN97_RS08550 PF00004 ATPase family associated with various cellular activities (AAA) LIN97_RS08550 PF05362 Lon protease (S16) C-terminal proteolytic domain LIN97_RS08555 PF00140 Sigma-70 factor, region 1.2 LIN97_RS08555 PF04539 Sigma-70 region 3 LIN97_RS08555 PF04545 Sigma-70, region 4 LIN97_RS08555 PF03979 Sigma-70 factor, region 1.1 LIN97_RS08555 PF04542 Sigma-70 region 2 LIN97_RS08555 PF04546 Sigma-70, non-essential region LIN97_RS08560 PF10410 DnaB-helicase binding domain of primase LIN97_RS08560 PF08278 DNA primase DnaG DnaB-binding LIN97_RS08560 PF01807 CHC2 zinc finger LIN97_RS08560 PF08275 DNA primase catalytic core, N-terminal domain LIN97_RS08565 PF01165 Ribosomal protein S21 LIN97_RS08570 PF00814 Glycoprotease family LIN97_RS08585 PF12826 Helix-hairpin-helix motif LIN97_RS08585 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LIN97_RS08585 PF03120 NAD-dependent DNA ligase OB-fold domain LIN97_RS08585 PF00533 BRCA1 C Terminus (BRCT) domain LIN97_RS08585 PF01653 NAD-dependent DNA ligase adenylation domain LIN97_RS08590 PF04354 ZipA, C-terminal FtsZ-binding domain LIN97_RS08600 PF00291 Pyridoxal-phosphate dependent enzyme LIN97_RS08605 PF03167 Uracil DNA glycosylase superfamily LIN97_RS08610 PF06071 Protein of unknown function (DUF933) LIN97_RS08610 PF01926 50S ribosome-binding GTPase LIN97_RS08615 PF01195 Peptidyl-tRNA hydrolase LIN97_RS08620 PF13276 HTH-like domain LIN97_RS08620 PF00665 Integrase core domain LIN97_RS08620 PF13333 Integrase core domain LIN97_RS08675 PF00953 Glycosyl transferase family 4 LIN97_RS08680 PF00202 Aminotransferase class-III LIN97_RS08685 PF01966 HD domain LIN97_RS08685 PF08335 GlnD PII-uridylyltransferase LIN97_RS08690 PF00557 Metallopeptidase family M24 LIN97_RS08695 PF01521 Iron-sulphur cluster biosynthesis LIN97_RS08705 PF00912 Transglycosylase LIN97_RS08705 PF00905 Penicillin binding protein transpeptidase domain LIN97_RS08705 PF14814 Bifunctional transglycosylase second domain LIN97_RS08710 PF03239 Iron permease FTR1 family LIN97_RS08715 PF10634 Fe2+ transport protein LIN97_RS08725 PF02687 FtsX-like permease family LIN97_RS08725 PF12704 MacB-like periplasmic core domain LIN97_RS08735 PF00005 ABC transporter LIN97_RS08735 PF12704 MacB-like periplasmic core domain LIN97_RS08735 PF02687 FtsX-like permease family LIN97_RS08740 PF00578 AhpC/TSA family LIN97_RS08750 PF13419 Haloacid dehalogenase-like hydrolase LIN97_RS08755 PF01609 Transposase DDE domain LIN97_RS08765 PF04408 Helicase associated domain (HA2) LIN97_RS08765 PF00270 DEAD/DEAH box helicase LIN97_RS08765 PF11898 Domain of unknown function (DUF3418) LIN97_RS08765 PF00271 Helicase conserved C-terminal domain LIN97_RS08765 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LIN97_RS08770 PF04241 Protein of unknown function (DUF423) LIN97_RS08775 PF04284 Protein of unknown function (DUF441) LIN97_RS08780 PF00462 Glutaredoxin LIN97_RS08785 PF01389 OmpA-like transmembrane domain LIN97_RS08785 PF00691 OmpA family LIN97_RS08790 PF13183 4Fe-4S dicluster domain LIN97_RS08790 PF01565 FAD binding domain LIN97_RS08790 PF02913 FAD linked oxidases, C-terminal domain LIN97_RS08795 PF03061 Thioesterase superfamily LIN97_RS08800 PF00762 Ferrochelatase LIN97_RS08805 PF08534 Redoxin LIN97_RS08810 PF01979 Amidohydrolase family LIN97_RS08815 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LIN97_RS08820 PF00701 Dihydrodipicolinate synthetase family LIN97_RS08825 PF01380 SIS domain LIN97_RS08825 PF01418 Helix-turn-helix domain, rpiR family LIN97_RS08830 PF00480 ROK family LIN97_RS08835 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase LIN97_RS08840 PF03480 Bacterial extracellular solute-binding protein, family 7 LIN97_RS08845 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LIN97_RS08845 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LIN97_RS08850 PF01344 Kelch motif LIN97_RS08855 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIN97_RS08855 PF02378 Phosphotransferase system, EIIC LIN97_RS08855 PF00367 phosphotransferase system, EIIB LIN97_RS08865 PF01389 OmpA-like transmembrane domain LIN97_RS08865 PF00691 OmpA family LIN97_RS08870 PF12344 Ultra-violet resistance protein B LIN97_RS08870 PF00271 Helicase conserved C-terminal domain LIN97_RS08870 PF04851 Type III restriction enzyme, res subunit LIN97_RS08870 PF02151 UvrB/uvrC motif LIN97_RS08870 PF17757 UvrB interaction domain LIN97_RS08880 PF03824 High-affinity nickel-transport protein LIN97_RS08885 PF06226 Protein of unknown function (DUF1007) LIN97_RS08890 PF12848 ABC transporter LIN97_RS08890 PF00005 ABC transporter LIN97_RS08895 PF03895 YadA-like membrane anchor domain LIN97_RS08900 PF00204 DNA gyrase B LIN97_RS08900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIN97_RS08900 PF01751 Toprim domain LIN97_RS08900 PF00986 DNA gyrase B subunit, carboxyl terminus LIN97_RS08905 PF03989 DNA gyrase C-terminal domain, beta-propeller LIN97_RS08905 PF00521 DNA gyrase/topoisomerase IV, subunit A LIN97_RS08910 PF00043 Glutathione S-transferase, C-terminal domain LIN97_RS08910 PF02798 Glutathione S-transferase, N-terminal domain LIN97_RS08915 PF08238 Sel1 repeat LIN97_RS08920 PF14256 YwiC-like protein LIN97_RS08925 PF01042 Endoribonuclease L-PSP LIN97_RS08940 PF00535 Glycosyl transferase family 2 LIN97_RS08945 PF03372 Endonuclease/Exonuclease/phosphatase family LIN97_RS08950 PF12169 DNA polymerase III subunits gamma and tau domain III LIN97_RS08950 PF12170 DNA polymerase III tau subunit V interacting with alpha LIN97_RS08955 PF00156 Phosphoribosyl transferase domain LIN97_RS08960 PF03279 Bacterial lipid A biosynthesis acyltransferase LIN97_RS08965 PF01925 Sulfite exporter TauE/SafE LIN97_RS08970 PF03411 Penicillin-insensitive murein endopeptidase LIN97_RS08975 PF01264 Chorismate synthase LIN97_RS08980 PF00924 Mechanosensitive ion channel LIN97_RS08980 PF12794 Mechanosensitive ion channel inner membrane domain 1 LIN97_RS08980 PF12795 Mechanosensitive ion channel porin domain LIN97_RS08985 PF00501 AMP-binding enzyme LIN97_RS08990 PF03925 SeqA protein C-terminal domain LIN97_RS08990 PF17206 SeqA protein N-terminal domain LIN97_RS08995 PF00561 alpha/beta hydrolase fold LIN97_RS09005 PF00258 Flavodoxin LIN97_RS09010 PF01475 Ferric uptake regulator family LIN97_RS09015 PF00521 DNA gyrase/topoisomerase IV, subunit A LIN97_RS09015 PF03989 DNA gyrase C-terminal domain, beta-propeller LIN97_RS09020 PF04247 Invasion gene expression up-regulator, SirB LIN97_RS09025 PF01253 Translation initiation factor SUI1 LIN97_RS09030 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LIN97_RS09035 PF18073 Rubredoxin metal binding domain LIN97_RS09040 PF06305 Lipopolysaccharide assembly protein A domain LIN97_RS09045 PF00216 Bacterial DNA-binding protein LIN97_RS09050 PF00575 S1 RNA binding domain LIN97_RS09055 PF02224 Cytidylate kinase LIN97_RS09060 PF04393 Protein of unknown function (DUF535) LIN97_RS09065 PF07715 TonB-dependent Receptor Plug Domain LIN97_RS09070 PF00675 Insulinase (Peptidase family M16) LIN97_RS09070 PF05193 Peptidase M16 inactive domain LIN97_RS09075 PF05437 Branched-chain amino acid transport protein (AzlD) LIN97_RS09080 PF03591 AzlC protein LIN97_RS09085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIN97_RS09085 PF03466 LysR substrate binding domain LIN97_RS09090 PF01717 Cobalamin-independent synthase, Catalytic domain LIN97_RS09090 PF08267 Cobalamin-independent synthase, N-terminal domain LIN97_RS09095 PF17761 DUF1016 N-terminal domain LIN97_RS09095 PF06250 YhcG PDDEXK nuclease domain LIN97_RS09115 PF01027 Inhibitor of apoptosis-promoting Bax1 LIN97_RS09120 PF04358 DsrC like protein LIN97_RS09125 PF01297 Zinc-uptake complex component A periplasmic LIN97_RS09130 PF00005 ABC transporter LIN97_RS09135 PF00950 ABC 3 transport family LIN97_RS09140 PF00950 ABC 3 transport family LIN97_RS09145 PF00708 Acylphosphatase LIN97_RS09150 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LIN97_RS09155 PF02142 MGS-like domain LIN97_RS09160 PF03733 Inner membrane component domain LIN97_RS09165 PF12805 FUSC-like inner membrane protein yccS LIN97_RS09170 PF01713 Smr domain LIN97_RS09175 PF05175 Methyltransferase small domain LIN97_RS09180 PF02779 Transketolase, pyrimidine binding domain LIN97_RS09180 PF02780 Transketolase, C-terminal domain LIN97_RS09185 PF00456 Transketolase, thiamine diphosphate binding domain LIN97_RS09205 PF00005 ABC transporter LIN97_RS09205 PF12848 ABC transporter LIN97_RS09205 PF16326 ABC transporter C-terminal domain LIN97_RS09210 PF01966 HD domain LIN97_RS09210 PF13286 Phosphohydrolase-associated domain LIN97_RS09215 PF04172 LrgB-like family LIN97_RS09220 PF03788 LrgA family LIN97_RS09230 PF00565 Staphylococcal nuclease homologue LIN97_RS09235 PF00266 Aminotransferase class-V LIN97_RS09240 PF02657 Fe-S metabolism associated domain LIN97_RS09245 PF01467 Cytidylyltransferase-like LIN97_RS09245 PF00294 pfkB family carbohydrate kinase LIN97_RS09250 PF03279 Bacterial lipid A biosynthesis acyltransferase LIN97_RS09260 PF02525 Flavodoxin-like fold LIN97_RS09270 PF16200 C-terminal region of band_7 LIN97_RS09270 PF01145 SPFH domain / Band 7 family LIN97_RS09280 PF03625 Domain of unknown function DUF302 LIN97_RS09280 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LIN97_RS09295 PF03150 Di-haem cytochrome c peroxidase LIN97_RS09295 PF14376 Haem-binding domain LIN97_RS09295 PF00034 Cytochrome c LIN97_RS09300 PF00570 HRDC domain LIN97_RS09300 PF01612 3'-5' exonuclease LIN97_RS09305 PF00501 AMP-binding enzyme LIN97_RS09305 PF13193 AMP-binding enzyme C-terminal domain LIN97_RS09310 PF03843 Outer membrane lipoprotein Slp family LIN97_RS09315 PF00814 Glycoprotease family LIN97_RS09320 PF06733 DEAD_2 LIN97_RS09320 PF13307 Helicase C-terminal domain LIN97_RS09325 PF01263 Aldose 1-epimerase LIN97_RS09335 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIN97_RS09340 PF00005 ABC transporter LIN97_RS09340 PF00664 ABC transporter transmembrane region LIN97_RS09345 PF00664 ABC transporter transmembrane region LIN97_RS09345 PF00005 ABC transporter LIN97_RS09355 PF02551 Acyl-CoA thioesterase LIN97_RS09370 PF07273 Protein of unknown function (DUF1439) LIN97_RS09375 PF00480 ROK family LIN97_RS09380 PF01569 PAP2 superfamily LIN97_RS09385 PF00925 GTP cyclohydrolase II LIN97_RS09400 PF06877 Regulator of ribonuclease activity B LIN97_RS09400 PF05117 Family of unknown function (DUF695) LIN97_RS09405 PF03372 Endonuclease/Exonuclease/phosphatase family LIN97_RS09410 PF02397 Bacterial sugar transferase LIN97_RS09415 PF00535 Glycosyl transferase family 2 LIN97_RS09420 PF00535 Glycosyl transferase family 2 LIN97_RS09430 PF00535 Glycosyl transferase family 2 LIN97_RS09435 PF04138 GtrA-like protein LIN97_RS09455 PF00535 Glycosyl transferase family 2 LIN97_RS09460 PF00005 ABC transporter LIN97_RS09465 PF01061 ABC-2 type transporter LIN97_RS09470 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LIN97_RS09475 PF04321 RmlD substrate binding domain LIN97_RS09480 PF00483 Nucleotidyl transferase LIN97_RS09485 PF16363 GDP-mannose 4,6 dehydratase LIN97_RS09490 PF13406 Transglycosylase SLT domain LIN97_RS09495 PF00535 Glycosyl transferase family 2 LIN97_RS09500 PF00535 Glycosyl transferase family 2 LIN97_RS09510 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) LIN97_RS09520 PF04230 Polysaccharide pyruvyl transferase LIN97_RS09525 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LIN97_RS09530 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system LIN97_RS09535 PF02698 DUF218 domain LIN97_RS09540 PF01068 ATP dependent DNA ligase domain LIN97_RS09540 PF14743 DNA ligase OB-like domain LIN97_RS09545 PF00580 UvrD/REP helicase N-terminal domain LIN97_RS09545 PF13361 UvrD-like helicase C-terminal domain LIN97_RS09550 PF02447 GntP family permease LIN97_RS09555 PF01202 Shikimate kinase LIN97_RS09560 PF00356 Bacterial regulatory proteins, lacI family LIN97_RS09560 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LIN97_RS09565 PF02634 FdhD/NarQ family LIN97_RS09610 PF13401 AAA domain LIN97_RS09610 PF09077 Mu B transposition protein, C terminal LIN97_RS09625 PF01292 Prokaryotic cytochrome b561 LIN97_RS09630 PF07503 HypF finger LIN97_RS09630 PF00708 Acylphosphatase LIN97_RS09630 PF17788 HypF Kae1-like domain LIN97_RS09630 PF01300 Telomere recombination LIN97_RS09635 PF00037 4Fe-4S binding domain LIN97_RS09635 PF12798 4Fe-4S binding domain LIN97_RS09640 PF00361 Proton-conducting membrane transporter LIN97_RS09645 PF00146 NADH dehydrogenase LIN97_RS09650 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LIN97_RS09650 PF00361 Proton-conducting membrane transporter LIN97_RS09655 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LIN97_RS09660 PF00361 Proton-conducting membrane transporter LIN97_RS09660 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LIN97_RS09665 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LIN97_RS09665 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LIN97_RS09665 PF00374 Nickel-dependent hydrogenase LIN97_RS09670 PF12838 4Fe-4S dicluster domain LIN97_RS09675 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LIN97_RS09680 PF07450 Formate hydrogenlyase maturation protein HycH LIN97_RS09685 PF01750 Hydrogenase maturation protease LIN97_RS09695 PF00549 CoA-ligase LIN97_RS09695 PF02629 CoA binding domain LIN97_RS09700 PF08442 ATP-grasp domain LIN97_RS09700 PF00549 CoA-ligase LIN97_RS09705 PF02817 e3 binding domain LIN97_RS09705 PF00364 Biotin-requiring enzyme LIN97_RS09705 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LIN97_RS09710 PF16870 2-oxoglutarate dehydrogenase C-terminal LIN97_RS09710 PF00676 Dehydrogenase E1 component LIN97_RS09710 PF16078 2-oxoglutarate dehydrogenase N-terminus LIN97_RS09710 PF02779 Transketolase, pyrimidine binding domain LIN97_RS09715 PF00753 Metallo-beta-lactamase superfamily LIN97_RS09720 PF05951 Bacterial protein of unknown function (DUF882) LIN97_RS09725 PF03734 L,D-transpeptidase catalytic domain LIN97_RS09730 PF03572 Peptidase family S41 LIN97_RS09730 PF17804 Tail specific protease N-terminal domain LIN97_RS09730 PF00595 PDZ domain LIN97_RS09730 PF11818 C-terminal domain of tail specific protease (DUF3340) LIN97_RS09735 PF17516 ProQ C-terminal domain LIN97_RS09735 PF04352 ProQ/FINO family LIN97_RS09740 PF04403 Paraquat-inducible protein A LIN97_RS09745 PF02470 MlaD protein LIN97_RS09750 PF07687 Peptidase dimerisation domain LIN97_RS09750 PF01546 Peptidase family M20/M25/M40 LIN97_RS09755 PF00005 ABC transporter LIN97_RS09755 PF08402 TOBE domain LIN97_RS09760 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS09765 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS09770 PF13416 Bacterial extracellular solute-binding protein LIN97_RS09775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LIN97_RS09775 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LIN97_RS09780 PF02403 Seryl-tRNA synthetase N-terminal domain LIN97_RS09780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIN97_RS09785 PF03605 Anaerobic c4-dicarboxylate membrane transporter LIN97_RS09790 PF12002 MgsA AAA+ ATPase C terminal LIN97_RS09790 PF16193 AAA C-terminal domain LIN97_RS09790 PF00004 ATPase family associated with various cellular activities (AAA) LIN97_RS09795 PF03548 Outer membrane lipoprotein carrier protein LolA LIN97_RS09800 PF01580 FtsK/SpoIIIE family LIN97_RS09800 PF09397 Ftsk gamma domain LIN97_RS09800 PF17854 FtsK alpha domain LIN97_RS09800 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LIN97_RS09805 PF01037 Lrp/AsnC ligand binding domain LIN97_RS09810 PF18073 Rubredoxin metal binding domain LIN97_RS09815 PF01928 CYTH domain LIN97_RS09820 PF01865 Protein of unknown function DUF47 LIN97_RS09825 PF01384 Phosphate transporter family LIN97_RS09830 PF08239 Bacterial SH3 domain LIN97_RS09835 PF01966 HD domain LIN97_RS09835 PF01743 Poly A polymerase head domain LIN97_RS09835 PF12627 Probable RNA and SrmB- binding site of polymerase A LIN97_RS09840 PF03550 Outer membrane lipoprotein LolB LIN97_RS09845 PF00288 GHMP kinases N terminal domain LIN97_RS09845 PF08544 GHMP kinases C terminal LIN97_RS09850 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LIN97_RS09850 PF14572 Phosphoribosyl synthetase-associated domain LIN97_RS09860 PF01070 FMN-dependent dehydrogenase LIN97_RS09865 PF02652 L-lactate permease LIN97_RS09870 PF04363 Protein of unknown function (DUF496) LIN97_RS09875 PF00266 Aminotransferase class-V LIN97_RS09880 PF00155 Aminotransferase class I and II LIN97_RS09915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LIN97_RS09920 PF00075 RNase H LIN97_RS09925 PF00929 Exonuclease LIN97_RS09945 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LIN97_RS09960 PF16325 Peptidase family U32 C-terminal domain LIN97_RS09960 PF01136 Peptidase family U32 LIN97_RS09965 PF02547 Queuosine biosynthesis protein LIN97_RS09970 PF00155 Aminotransferase class I and II LIN97_RS09975 PF01702 Queuine tRNA-ribosyltransferase LIN97_RS09980 PF02699 Preprotein translocase subunit LIN97_RS09985 PF13721 SecD export protein N-terminal TM region LIN97_RS09985 PF02355 Protein export membrane protein LIN97_RS09985 PF07549 SecD/SecF GG Motif LIN97_RS09990 PF02355 Protein export membrane protein LIN97_RS09990 PF07549 SecD/SecF GG Motif LIN97_RS09995 PF00593 TonB dependent receptor LIN97_RS09995 PF07715 TonB-dependent Receptor Plug Domain LIN97_RS10000 PF00465 Iron-containing alcohol dehydrogenase LIN97_RS10000 PF00171 Aldehyde dehydrogenase family LIN97_RS10005 PF02653 Branched-chain amino acid transport system / permease component LIN97_RS10010 PF00005 ABC transporter LIN97_RS10015 PF13407 Periplasmic binding protein domain LIN97_RS10020 PF13407 Periplasmic binding protein domain LIN97_RS10025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIN97_RS10025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIN97_RS10030 PF00171 Aldehyde dehydrogenase family LIN97_RS10035 PF07690 Major Facilitator Superfamily LIN97_RS10040 PF00459 Inositol monophosphatase family LIN97_RS10045 PF04962 KduI/IolB family LIN97_RS10055 PF00294 pfkB family carbohydrate kinase LIN97_RS10060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIN97_RS10060 PF00205 Thiamine pyrophosphate enzyme, central domain LIN97_RS10060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LIN97_RS10065 PF01261 Xylose isomerase-like TIM barrel LIN97_RS10070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIN97_RS10070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIN97_RS10075 PF05068 Mannitol repressor LIN97_RS10080 PF08125 Mannitol dehydrogenase C-terminal domain LIN97_RS10080 PF01232 Mannitol dehydrogenase Rossmann domain LIN97_RS10085 PF02378 Phosphotransferase system, EIIC LIN97_RS10085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIN97_RS10085 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIN97_RS10095 PF00664 ABC transporter transmembrane region LIN97_RS10095 PF03412 Peptidase C39 family LIN97_RS10095 PF00005 ABC transporter LIN97_RS10100 PF02382 N-terminal domain in RTX protein LIN97_RS10100 PF08339 RTX C-terminal domain LIN97_RS10100 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LIN97_RS10105 PF02794 RTX toxin acyltransferase family LIN97_RS10115 PF00464 Serine hydroxymethyltransferase LIN97_RS10130 PF08468 Methyltransferase small domain N-terminal LIN97_RS10130 PF05175 Methyltransferase small domain LIN97_RS10135 PF03603 DNA polymerase III psi subunit LIN97_RS10140 PF00583 Acetyltransferase (GNAT) family LIN97_RS10145 PF17946 RecC C-terminal domain LIN97_RS10150 PF17344 Family of unknown function (DUF5374) LIN97_RS10170 PF00691 OmpA family LIN97_RS10175 PF07676 WD40-like Beta Propeller Repeat LIN97_RS10175 PF04052 TolB amino-terminal domain LIN97_RS10180 PF06519 TolA C-terminal LIN97_RS10185 PF02472 Biopolymer transport protein ExbD/TolR LIN97_RS10190 PF01618 MotA/TolQ/ExbB proton channel family LIN97_RS10195 PF03061 Thioesterase superfamily LIN97_RS10210 PF02322 Cytochrome bd terminal oxidase subunit II LIN97_RS10215 PF01654 Cytochrome bd terminal oxidase subunit I LIN97_RS10220 PF17274 Family of unknown function (DUF5339) LIN97_RS10225 PF17864 RuvB AAA lid domain LIN97_RS10225 PF05496 Holliday junction DNA helicase RuvB P-loop domain LIN97_RS10225 PF05491 RuvB C-terminal winged helix domain LIN97_RS10230 PF07499 RuvA, C-terminal domain LIN97_RS10230 PF01330 RuvA N terminal domain LIN97_RS10235 PF02075 Crossover junction endodeoxyribonuclease RuvC LIN97_RS10245 PF01709 Transcriptional regulator LIN97_RS10250 PF00293 NUDIX domain LIN97_RS10260 PF01336 OB-fold nucleic acid binding domain LIN97_RS10260 PF00152 tRNA synthetases class II (D, K and N) LIN97_RS10260 PF02938 GAD domain LIN97_RS10265 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family LIN97_RS10270 PF13649 Methyltransferase domain LIN97_RS10280 PF07690 Major Facilitator Superfamily LIN97_RS10285 PF07715 TonB-dependent Receptor Plug Domain LIN97_RS10285 PF00593 TonB dependent receptor LIN97_RS10290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIN97_RS10295 PF00929 Exonuclease LIN97_RS10300 PF13726 Na+-H+ antiporter family LIN97_RS10300 PF03553 Na+/H+ antiporter family LIN97_RS10310 PF04055 Radical SAM superfamily LIN97_RS10310 PF01938 TRAM domain LIN97_RS10310 PF00919 Uncharacterized protein family UPF0004 LIN97_RS10315 PF01494 FAD binding domain LIN97_RS10325 PF02677 Epoxyqueuosine reductase QueH LIN97_RS10330 PF00348 Polyprenyl synthetase LIN97_RS10335 PF00829 Ribosomal prokaryotic L21 protein LIN97_RS10340 PF01016 Ribosomal L27 protein LIN97_RS10345 PF00892 EamA-like transporter family LIN97_RS10350 PF00892 EamA-like transporter family LIN97_RS10355 PF01018 GTP1/OBG LIN97_RS10355 PF01926 50S ribosome-binding GTPase LIN97_RS10360 PF01668 SmpB protein LIN97_RS10365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIN97_RS10375 PF12911 N-terminal TM domain of oligopeptide transport permease C LIN97_RS10375 PF00528 Binding-protein-dependent transport system inner membrane component LIN97_RS10380 PF00005 ABC transporter LIN97_RS10380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIN97_RS10385 PF00486 Transcriptional regulatory protein, C terminal LIN97_RS10385 PF00072 Response regulator receiver domain LIN97_RS10390 PF00444 Ribosomal protein L36 LIN97_RS10395 PF01197 Ribosomal protein L31 LIN97_RS10400 PF03641 Possible lysine decarboxylase LIN97_RS10405 PF00085 Thioredoxin LIN97_RS10405 PF02683 Cytochrome C biogenesis protein transmembrane region LIN97_RS10405 PF11412 Disulphide bond corrector protein DsbC LIN97_RS10410 PF07681 DoxX LIN97_RS10420 PF00575 S1 RNA binding domain LIN97_RS10420 PF10150 Ribonuclease E/G family LIN97_RS10420 PF12111 Polyribonucleotide phosphorylase C terminal LIN97_RS10425 PF00849 RNA pseudouridylate synthase LIN97_RS10425 PF01479 S4 domain LIN97_RS10430 PF00085 Thioredoxin LIN97_RS10435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIN97_RS10435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIN97_RS10440 PF01053 Cys/Met metabolism PLP-dependent enzyme LIN97_RS10455 PF01464 Transglycosylase SLT domain LIN97_RS10460 PF04956 TrbC/VIRB2 family LIN97_RS10465 PF03524 Conjugal transfer protein LIN97_RS10480 PF03458 UPF0126 domain LIN97_RS10490 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LIN97_RS10495 PF01225 Mur ligase family, catalytic domain LIN97_RS10495 PF02875 Mur ligase family, glutamate ligase domain LIN97_RS10495 PF08245 Mur ligase middle domain LIN97_RS10505 PF03562 MltA specific insert domain LIN97_RS10505 PF06725 3D domain LIN97_RS10510 PF00899 ThiF family LIN97_RS10515 PF01297 Zinc-uptake complex component A periplasmic LIN97_RS10520 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LIN97_RS10525 PF04461 Protein of unknown function (DUF520) LIN97_RS10530 PF18429 Domain of unknown function (DUF5609) LIN97_RS10535 PF10144 Bacterial virulence factor haemolysin LIN97_RS10540 PF01649 Ribosomal protein S20 LIN97_RS10545 PF03023 Lipid II flippase MurJ LIN97_RS10550 PF06574 FAD synthetase LIN97_RS10550 PF01687 Riboflavin kinase LIN97_RS10560 PF06827 Zinc finger found in FPG and IleRS LIN97_RS10560 PF00133 tRNA synthetases class I (I, L, M and V) LIN97_RS10560 PF08264 Anticodon-binding domain of tRNA LIN97_RS10565 PF01252 Signal peptidase (SPase) II LIN97_RS10570 PF02401 LytB protein LIN97_RS10575 PF05698 Bacterial trigger factor protein (TF) C-terminus LIN97_RS10575 PF05697 Bacterial trigger factor protein (TF) LIN97_RS10575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LIN97_RS10580 PF02899 Phage integrase, N-terminal SAM-like domain LIN97_RS10580 PF00589 Phage integrase family LIN97_RS10585 PF12832 MFS_1 like family LIN97_RS10595 PF04381 Putative exonuclease, RdgC LIN97_RS10605 PF08525 Opacity-associated protein A N-terminal motif LIN97_RS10605 PF04225 Opacity-associated protein A LysM-like domain LIN97_RS10610 PF04055 Radical SAM superfamily LIN97_RS10615 PF09285 Elongation factor P, C-terminal LIN97_RS10615 PF08207 Elongation factor P (EF-P) KOW-like domain LIN97_RS10615 PF01132 Elongation factor P (EF-P) OB domain LIN97_RS10620 PF01212 Beta-eliminating lyase LIN97_RS10625 PF03222 Tryptophan/tyrosine permease family LIN97_RS10630 PF13309 HTH domain LIN97_RS10630 PF08348 YheO-like PAS domain LIN97_RS10635 PF10063 Uncharacterized integral membrane protein (DUF2301) LIN97_RS10640 PF00149 Calcineurin-like phosphoesterase LIN97_RS10645 PF01553 Acyltransferase LIN97_RS10650 PF07732 Multicopper oxidase LIN97_RS10655 PF00892 EamA-like transporter family LIN97_RS10660 PF04055 Radical SAM superfamily LIN97_RS10665 PF02901 Pyruvate formate lyase-like LIN97_RS10665 PF01228 Glycine radical LIN97_RS10670 PF01226 Formate/nitrite transporter LIN97_RS10675 PF01230 HIT domain LIN97_RS10685 PF00933 Glycosyl hydrolase family 3 N terminal domain LIN97_RS10690 PF05958 tRNA (Uracil-5-)-methyltransferase LIN97_RS10695 PF00365 Phosphofructokinase LIN97_RS10710 PF03883 Peroxide stress protein YaaA LIN97_RS10715 PF03167 Uracil DNA glycosylase superfamily LIN97_RS10720 PF01228 Glycine radical LIN97_RS10725 PF00679 Elongation factor G C-terminus LIN97_RS10725 PF00009 Elongation factor Tu GTP binding domain LIN97_RS10725 PF03144 Elongation factor Tu domain 2 LIN97_RS10725 PF06421 GTP-binding protein LepA C-terminus LIN97_RS10730 PF10502 Signal peptidase, peptidase S26 LIN97_RS10735 PF00035 Double-stranded RNA binding motif LIN97_RS10735 PF14622 Ribonuclease-III-like LIN97_RS10740 PF01926 50S ribosome-binding GTPase LIN97_RS10740 PF07650 KH domain LIN97_RS10745 PF01926 50S ribosome-binding GTPase LIN97_RS10745 PF12631 MnmE helical domain LIN97_RS10745 PF10396 GTP-binding protein TrmE N-terminus LIN97_RS10750 PF02096 60Kd inner membrane protein LIN97_RS10750 PF14849 YidC periplasmic domain LIN97_RS10755 PF01809 Putative membrane protein insertion efficiency factor LIN97_RS10760 PF00825 Ribonuclease P LIN97_RS10765 PF00468 Ribosomal protein L34