locus-tag class description KO461_RS00005 PF00308 Bacterial dnaA protein KO461_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix KO461_RS00005 PF11638 DnaA N-terminal domain KO461_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KO461_RS00010 PF02767 DNA polymerase III beta subunit, central domain KO461_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KO461_RS00015 PF02463 RecF/RecN/SMC N terminal domain KO461_RS00020 PF13649 Methyltransferase domain KO461_RS00025 PF00080 Copper/zinc superoxide dismutase (SODC) KO461_RS00035 PF03918 Cytochrome C biogenesis protein KO461_RS00040 PF08534 Redoxin KO461_RS00045 PF01578 Cytochrome C assembly protein KO461_RS00045 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KO461_RS00050 PF03916 Polysulphide reductase, NrfD KO461_RS00055 PF13247 4Fe-4S dicluster domain KO461_RS00065 PF02335 Cytochrome c552 KO461_RS00080 PF03918 Cytochrome C biogenesis protein KO461_RS00085 PF03918 Cytochrome C biogenesis protein KO461_RS00090 PF08534 Redoxin KO461_RS00095 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KO461_RS00095 PF01578 Cytochrome C assembly protein KO461_RS00100 PF03100 CcmE KO461_RS00105 PF04995 Heme exporter protein D (CcmD) KO461_RS00110 PF01578 Cytochrome C assembly protein KO461_RS00115 PF03379 CcmB protein KO461_RS00120 PF00005 ABC transporter KO461_RS00125 PF07690 Major Facilitator Superfamily KO461_RS00130 PF07690 Major Facilitator Superfamily KO461_RS00135 PF00849 RNA pseudouridylate synthase KO461_RS00135 PF01479 S4 domain KO461_RS00175 PF13276 HTH-like domain KO461_RS00175 PF00665 Integrase core domain KO461_RS00175 PF13333 Integrase core domain KO461_RS00180 PF00438 S-adenosylmethionine synthetase, N-terminal domain KO461_RS00180 PF02772 S-adenosylmethionine synthetase, central domain KO461_RS00180 PF02773 S-adenosylmethionine synthetase, C-terminal domain KO461_RS00185 PF00312 Ribosomal protein S15 KO461_RS00190 PF00561 alpha/beta hydrolase fold KO461_RS00195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KO461_RS00195 PF16582 Middle domain of thiamine pyrophosphate KO461_RS00195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KO461_RS00200 PF00425 chorismate binding enzyme KO461_RS00205 PF00155 Aminotransferase class I and II KO461_RS00210 PF00392 Bacterial regulatory proteins, gntR family KO461_RS00210 PF07840 FadR C-terminal domain KO461_RS00215 PF06450 Bacterial Na+/H+ antiporter B (NhaB) KO461_RS00220 PF02600 Disulfide bond formation protein DsbB KO461_RS00230 PF00497 Bacterial extracellular solute-binding proteins, family 3 KO461_RS00230 PF01464 Transglycosylase SLT domain KO461_RS00235 PF02152 Dihydroneopterin aldolase KO461_RS00240 PF02660 Glycerol-3-phosphate acyltransferase KO461_RS00245 PF01476 LysM domain KO461_RS00250 PF04228 Putative neutral zinc metallopeptidase KO461_RS00260 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KO461_RS00260 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KO461_RS00265 PF01515 Phosphate acetyl/butaryl transferase KO461_RS00265 PF03949 Malic enzyme, NAD binding domain KO461_RS00265 PF00390 Malic enzyme, N-terminal domain KO461_RS00300 PF13333 Integrase core domain KO461_RS00300 PF00665 Integrase core domain KO461_RS00300 PF13276 HTH-like domain KO461_RS00305 PF17283 SprT-like zinc ribbon domain KO461_RS00305 PF10263 SprT-like family KO461_RS00310 PF03222 Tryptophan/tyrosine permease family KO461_RS00315 PF03315 Serine dehydratase beta chain KO461_RS00315 PF03313 Serine dehydratase alpha chain KO461_RS00320 PF17763 Glutaminase/Asparaginase C-terminal domain KO461_RS00320 PF00710 Asparaginase, N-terminal KO461_RS00325 PF04055 Radical SAM superfamily KO461_RS00335 PF13464 Domain of unknown function (DUF4115) KO461_RS00340 PF04551 GcpE protein KO461_RS00345 PF03129 Anticodon binding domain KO461_RS00345 PF13393 Histidyl-tRNA synthetase KO461_RS00350 PF09976 Tetratricopeptide repeat-like domain KO461_RS00355 PF04191 Phospholipid methyltransferase KO461_RS00360 PF00308 Bacterial dnaA protein KO461_RS00365 PF00860 Permease family KO461_RS00375 PF13145 PPIC-type PPIASE domain KO461_RS00380 PF02190 ATP-dependent protease La (LON) substrate-binding domain KO461_RS00380 PF05362 Lon protease (S16) C-terminal proteolytic domain KO461_RS00380 PF00004 ATPase family associated with various cellular activities (AAA) KO461_RS00390 PF01740 STAS domain KO461_RS00390 PF00916 Sulfate permease family KO461_RS00405 PF03786 D-mannonate dehydratase (UxuA) KO461_RS00410 PF07729 FCD domain KO461_RS00410 PF00392 Bacterial regulatory proteins, gntR family KO461_RS00415 PF01055 Glycosyl hydrolases family 31 KO461_RS00415 PF16338 Domain of unknown function (DUF4968) KO461_RS00415 PF13802 Galactose mutarotase-like KO461_RS00415 PF17137 Domain of unknown function (DUF5110) KO461_RS00420 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KO461_RS00425 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KO461_RS00430 PF03480 Bacterial extracellular solute-binding protein, family 7 KO461_RS00435 PF00294 pfkB family carbohydrate kinase KO461_RS00440 PF00106 short chain dehydrogenase KO461_RS00445 PF02614 Glucuronate isomerase KO461_RS00450 PF01081 KDPG and KHG aldolase KO461_RS00455 PF01497 Periplasmic binding protein KO461_RS00460 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KO461_RS00460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KO461_RS00465 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KO461_RS00470 PF06969 HemN C-terminal domain KO461_RS00470 PF04055 Radical SAM superfamily KO461_RS00475 PF01906 Putative heavy-metal-binding KO461_RS00480 PF01725 Ham1 family KO461_RS00490 PF02401 LytB protein KO461_RS00495 PF01252 Signal peptidase (SPase) II KO461_RS00500 PF06827 Zinc finger found in FPG and IleRS KO461_RS00500 PF00133 tRNA synthetases class I (I, L, M and V) KO461_RS00500 PF08264 Anticodon-binding domain of tRNA KO461_RS00515 PF06574 FAD synthetase KO461_RS00515 PF01687 Riboflavin kinase KO461_RS00520 PF03023 Lipid II flippase MurJ KO461_RS00525 PF01649 Ribosomal protein S20 KO461_RS00530 PF10144 Bacterial virulence factor haemolysin KO461_RS00535 PF18429 Domain of unknown function (DUF5609) KO461_RS00540 PF04461 Protein of unknown function (DUF520) KO461_RS00545 PF01195 Peptidyl-tRNA hydrolase KO461_RS00550 PF01926 50S ribosome-binding GTPase KO461_RS00550 PF06071 Protein of unknown function (DUF933) KO461_RS00555 PF03167 Uracil DNA glycosylase superfamily KO461_RS00560 PF00291 Pyridoxal-phosphate dependent enzyme KO461_RS00570 PF04354 ZipA, C-terminal FtsZ-binding domain KO461_RS00575 PF00533 BRCA1 C Terminus (BRCT) domain KO461_RS00575 PF01653 NAD-dependent DNA ligase adenylation domain KO461_RS00575 PF03120 NAD-dependent DNA ligase OB-fold domain KO461_RS00575 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KO461_RS00575 PF12826 Helix-hairpin-helix motif KO461_RS00580 PF00265 Thymidine kinase KO461_RS00590 PF00814 Glycoprotease family KO461_RS00595 PF01165 Ribosomal protein S21 KO461_RS00600 PF10410 DnaB-helicase binding domain of primase KO461_RS00600 PF08278 DNA primase DnaG DnaB-binding KO461_RS00600 PF08275 DNA primase catalytic core, N-terminal domain KO461_RS00600 PF01807 CHC2 zinc finger KO461_RS00605 PF04546 Sigma-70, non-essential region KO461_RS00605 PF03979 Sigma-70 factor, region 1.1 KO461_RS00605 PF00140 Sigma-70 factor, region 1.2 KO461_RS00605 PF04542 Sigma-70 region 2 KO461_RS00605 PF04545 Sigma-70, region 4 KO461_RS00605 PF04539 Sigma-70 region 3 KO461_RS00615 PF13356 Arm DNA-binding domain KO461_RS00615 PF00589 Phage integrase family KO461_RS00625 PF13276 HTH-like domain KO461_RS00625 PF00665 Integrase core domain KO461_RS00625 PF13333 Integrase core domain KO461_RS00640 PF00366 Ribosomal protein S17 KO461_RS00645 PF00831 Ribosomal L29 protein KO461_RS00650 PF00252 Ribosomal protein L16p/L10e KO461_RS00655 PF00189 Ribosomal protein S3, C-terminal domain KO461_RS00655 PF07650 KH domain KO461_RS00660 PF00237 Ribosomal protein L22p/L17e KO461_RS00665 PF00203 Ribosomal protein S19 KO461_RS00670 PF03947 Ribosomal Proteins L2, C-terminal domain KO461_RS00670 PF00181 Ribosomal Proteins L2, RNA binding domain KO461_RS00675 PF00276 Ribosomal protein L23 KO461_RS00680 PF00573 Ribosomal protein L4/L1 family KO461_RS00685 PF00297 Ribosomal protein L3 KO461_RS00690 PF00338 Ribosomal protein S10p/S20e KO461_RS00700 PF01144 Coenzyme A transferase KO461_RS00705 PF01144 Coenzyme A transferase KO461_RS00710 PF02667 Short chain fatty acid transporter KO461_RS00715 PF02803 Thiolase, C-terminal domain KO461_RS00715 PF00108 Thiolase, N-terminal domain KO461_RS00720 PF13404 AsnC-type helix-turn-helix domain KO461_RS00720 PF01037 Lrp/AsnC ligand binding domain KO461_RS00725 PF03606 C4-dicarboxylate anaerobic carrier KO461_RS00730 PF00696 Amino acid kinase family KO461_RS00735 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KO461_RS00735 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KO461_RS00740 PF00654 Voltage gated chloride channel KO461_RS00745 PF01207 Dihydrouridine synthase (Dus) KO461_RS00750 PF03590 Aspartate-ammonia ligase KO461_RS00755 PF13404 AsnC-type helix-turn-helix domain KO461_RS00755 PF01037 Lrp/AsnC ligand binding domain KO461_RS00760 PF01048 Phosphorylase superfamily KO461_RS00765 PF01594 AI-2E family transporter KO461_RS00770 PF03960 ArsC family KO461_RS00775 PF17347 Family of unknown function (DUF5377) KO461_RS00780 PF03889 Alternative ribosome-rescue factor A KO461_RS00790 PF01451 Low molecular weight phosphotyrosine protein phosphatase KO461_RS00800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KO461_RS00810 PF06877 Regulator of ribonuclease activity B KO461_RS00815 PF01741 Large-conductance mechanosensitive channel, MscL KO461_RS00820 PF02254 TrkA-N domain KO461_RS00820 PF02080 TrkA-C domain KO461_RS00825 PF01029 NusB family KO461_RS00825 PF01189 16S rRNA methyltransferase RsmB/F KO461_RS00830 PF02911 Formyl transferase, C-terminal domain KO461_RS00830 PF00551 Formyl transferase KO461_RS00835 PF01327 Polypeptide deformylase KO461_RS00865 PF12724 Flavodoxin domain KO461_RS00870 PF02386 Cation transport protein KO461_RS00880 PF01206 Sulfurtransferase TusA KO461_RS00885 PF04380 Membrane fusogenic activity KO461_RS00890 PF13521 AAA domain KO461_RS00890 PF01467 Cytidylyltransferase-like KO461_RS00895 PF00149 Calcineurin-like phosphoesterase KO461_RS00900 PF03222 Tryptophan/tyrosine permease family KO461_RS00905 PF01196 Ribosomal protein L17 KO461_RS00910 PF01000 RNA polymerase Rpb3/RpoA insert domain KO461_RS00910 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KO461_RS00910 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KO461_RS00915 PF01479 S4 domain KO461_RS00915 PF00163 Ribosomal protein S4/S9 N-terminal domain KO461_RS00920 PF00411 Ribosomal protein S11 KO461_RS00925 PF00416 Ribosomal protein S13/S18 KO461_RS00930 PF00444 Ribosomal protein L36 KO461_RS00935 PF00344 SecY translocase KO461_RS00940 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KO461_RS00945 PF00327 Ribosomal protein L30p/L7e KO461_RS00950 PF00333 Ribosomal protein S5, N-terminal domain KO461_RS00950 PF03719 Ribosomal protein S5, C-terminal domain KO461_RS00955 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KO461_RS00960 PF00347 Ribosomal protein L6 KO461_RS00965 PF00410 Ribosomal protein S8 KO461_RS00970 PF00253 Ribosomal protein S14p/S29e KO461_RS00975 PF00281 Ribosomal protein L5 KO461_RS00975 PF00673 ribosomal L5P family C-terminus KO461_RS00980 PF00467 KOW motif KO461_RS00980 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KO461_RS00985 PF00238 Ribosomal protein L14p/L23e KO461_RS00995 PF00490 Delta-aminolevulinic acid dehydratase KO461_RS01000 PF00902 Sec-independent protein translocase protein (TatC) KO461_RS01010 PF02416 mttA/Hcf106 family KO461_RS01040 PF01430 Hsp33 protein KO461_RS01045 PF01479 S4 domain KO461_RS01050 PF13419 Haloacid dehalogenase-like hydrolase KO461_RS01055 PF00293 NUDIX domain KO461_RS01065 PF04224 Protein of unknown function, DUF417 KO461_RS01070 PF03169 OPT oligopeptide transporter protein KO461_RS01080 PF00459 Inositol monophosphatase family KO461_RS01085 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KO461_RS01085 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KO461_RS01090 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KO461_RS01100 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KO461_RS01100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KO461_RS01105 PF01544 CorA-like Mg2+ transporter protein KO461_RS01110 PF02325 YGGT family KO461_RS01115 PF02594 Uncharacterised ACR, YggU family COG1872 KO461_RS01120 PF00881 Nitroreductase family KO461_RS01140 PF02578 Multi-copper polyphenol oxidoreductase laccase KO461_RS01145 PF00849 RNA pseudouridylate synthase KO461_RS01145 PF01479 S4 domain KO461_RS01150 PF13525 Outer membrane lipoprotein KO461_RS01155 PF01812 5-formyltetrahydrofolate cyclo-ligase family KO461_RS01165 PF05164 Cell division protein ZapA KO461_RS01170 PF03695 Uncharacterised protein family (UPF0149) KO461_RS01175 PF05195 Aminopeptidase P, N-terminal domain KO461_RS01175 PF00557 Metallopeptidase family M24 KO461_RS01180 PF00886 Ribosomal protein S16 KO461_RS01185 PF05239 PRC-barrel domain KO461_RS01185 PF01782 RimM N-terminal domain KO461_RS01190 PF01746 tRNA (Guanine-1)-methyltransferase KO461_RS01195 PF01245 Ribosomal protein L19 KO461_RS01200 PF04093 rod shape-determining protein MreD KO461_RS01205 PF04085 rod shape-determining protein MreC KO461_RS01215 PF17876 Cold shock domain KO461_RS01215 PF08461 Ribonuclease R winged-helix domain KO461_RS01215 PF00773 RNB domain KO461_RS01215 PF00575 S1 RNA binding domain KO461_RS01215 PF08206 Ribonuclease B OB domain KO461_RS01220 PF00588 SpoU rRNA Methylase family KO461_RS01220 PF08032 RNA 2'-O ribose methyltransferase substrate binding KO461_RS01225 PF07690 Major Facilitator Superfamily KO461_RS01230 PF03009 Glycerophosphoryl diester phosphodiesterase family KO461_RS01235 PF02481 DNA recombination-mediator protein A KO461_RS01235 PF17782 DprA winged helix domain KO461_RS01240 PF01281 Ribosomal protein L9, N-terminal domain KO461_RS01240 PF03948 Ribosomal protein L9, C-terminal domain KO461_RS01245 PF01084 Ribosomal protein S18 KO461_RS01250 PF00436 Single-strand binding protein family KO461_RS01255 PF01250 Ribosomal protein S6 KO461_RS01260 PF01726 LexA DNA binding domain KO461_RS01260 PF00717 Peptidase S24-like KO461_RS01265 PF01553 Acyltransferase KO461_RS01270 PF00664 ABC transporter transmembrane region KO461_RS01270 PF00005 ABC transporter KO461_RS01275 PF02311 AraC-like ligand binding domain KO461_RS01275 PF12833 Helix-turn-helix domain KO461_RS01280 PF02627 Carboxymuconolactone decarboxylase family KO461_RS01285 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KO461_RS01295 PF01467 Cytidylyltransferase-like KO461_RS01300 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KO461_RS01300 PF00534 Glycosyl transferases group 1 KO461_RS01305 PF00535 Glycosyl transferase family 2 KO461_RS01320 PF13091 PLD-like domain KO461_RS01325 PF00588 SpoU rRNA Methylase family KO461_RS01325 PF08032 RNA 2'-O ribose methyltransferase substrate binding KO461_RS01330 PF00037 4Fe-4S binding domain KO461_RS01335 PF00445 Ribonuclease T2 family KO461_RS01340 PF00162 Phosphoglycerate kinase KO461_RS01345 PF01116 Fructose-bisphosphate aldolase class-II KO461_RS01350 PF04932 O-Antigen ligase KO461_RS01355 PF12146 Serine aminopeptidase, S33 KO461_RS01370 PF00009 Elongation factor Tu GTP binding domain KO461_RS01370 PF03144 Elongation factor Tu domain 2 KO461_RS01370 PF03143 Elongation factor Tu C-terminal domain KO461_RS01395 PF00485 Phosphoribulokinase / Uridine kinase family KO461_RS01400 PF18053 DNA gyrase B subunit insert domain KO461_RS01400 PF01751 Toprim domain KO461_RS01400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KO461_RS01400 PF00204 DNA gyrase B KO461_RS01400 PF00986 DNA gyrase B subunit, carboxyl terminus KO461_RS01405 PF09382 RQC domain KO461_RS01405 PF00270 DEAD/DEAH box helicase KO461_RS01405 PF00271 Helicase conserved C-terminal domain KO461_RS01405 PF00570 HRDC domain KO461_RS01405 PF16124 RecQ zinc-binding KO461_RS01410 PF01491 Frataxin-like domain KO461_RS01420 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KO461_RS01420 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KO461_RS01425 PF07274 Protein of unknown function (DUF1440) KO461_RS01430 PF03352 Methyladenine glycosylase KO461_RS01435 PF04453 LPS transport system D KO461_RS01435 PF03968 OstA-like protein KO461_RS01440 PF00156 Phosphoribosyl transferase domain KO461_RS01445 PF07687 Peptidase dimerisation domain KO461_RS01445 PF01546 Peptidase family M20/M25/M40 KO461_RS01450 PF00665 Integrase core domain KO461_RS01450 PF13333 Integrase core domain KO461_RS01450 PF13276 HTH-like domain KO461_RS01460 PF00106 short chain dehydrogenase KO461_RS01465 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KO461_RS01475 PF03888 MucB/RseB N-terminal domain KO461_RS01475 PF17188 MucB/RseB C-terminal domain KO461_RS01480 PF03872 Anti sigma-E protein RseA, N-terminal domain KO461_RS01480 PF03873 Anti sigma-E protein RseA, C-terminal domain KO461_RS01485 PF04542 Sigma-70 region 2 KO461_RS01485 PF08281 Sigma-70, region 4 KO461_RS01490 PF03937 Flavinator of succinate dehydrogenase KO461_RS01495 PF00893 Small Multidrug Resistance protein KO461_RS01500 PF03129 Anticodon binding domain KO461_RS01500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KO461_RS01500 PF04073 Aminoacyl-tRNA editing domain KO461_RS01505 PF12390 Selenocysteine synthase N terminal KO461_RS01505 PF03841 L-seryl-tRNA selenium transferase KO461_RS01510 PF00009 Elongation factor Tu GTP binding domain KO461_RS01510 PF09106 Elongation factor SelB, winged helix KO461_RS01510 PF09107 Elongation factor SelB, winged helix KO461_RS01510 PF03144 Elongation factor Tu domain 2 KO461_RS01545 PF00004 ATPase family associated with various cellular activities (AAA) KO461_RS01545 PF07724 AAA domain (Cdc48 subfamily) KO461_RS01545 PF17871 AAA lid domain KO461_RS01545 PF10431 C-terminal, D2-small domain, of ClpB protein KO461_RS01580 PF00994 Probable molybdopterin binding domain KO461_RS01595 PF01066 CDP-alcohol phosphatidyltransferase KO461_RS01600 PF03600 Citrate transporter KO461_RS01600 PF02080 TrkA-C domain KO461_RS01605 PF01351 Ribonuclease HII KO461_RS01610 PF02684 Lipid-A-disaccharide synthetase KO461_RS01615 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KO461_RS01615 PF00132 Bacterial transferase hexapeptide (six repeats) KO461_RS01620 PF07977 FabA-like domain KO461_RS01625 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KO461_RS01625 PF00132 Bacterial transferase hexapeptide (six repeats) KO461_RS01630 PF03938 Outer membrane protein (OmpH-like) KO461_RS01635 PF07244 Surface antigen variable number repeat KO461_RS01635 PF01103 Surface antigen KO461_RS01640 PF02163 Peptidase family M50 KO461_RS01640 PF00595 PDZ domain KO461_RS01640 PF17820 PDZ domain KO461_RS01650 PF01255 Putative undecaprenyl diphosphate synthase KO461_RS01655 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KO461_RS01655 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KO461_RS01655 PF13288 DXP reductoisomerase C-terminal domain KO461_RS01660 PF01765 Ribosome recycling factor KO461_RS01665 PF00696 Amino acid kinase family KO461_RS01670 PF06826 Predicted Permease Membrane Region KO461_RS01670 PF02080 TrkA-C domain KO461_RS01675 PF00005 ABC transporter KO461_RS01675 PF06472 ABC transporter transmembrane region 2 KO461_RS01685 PF08220 DeoR-like helix-turn-helix domain KO461_RS01685 PF00455 DeoR C terminal sensor domain KO461_RS01690 PF01694 Rhomboid family KO461_RS01695 PF17364 Family of unknown function (DUF5389) KO461_RS01700 PF00581 Rhodanese-like domain KO461_RS01705 PF03350 Uncharacterized protein family, UPF0114 KO461_RS01710 PF02646 RmuC family KO461_RS01715 PF01396 Topoisomerase DNA binding C4 zinc finger KO461_RS01720 PF01300 Telomere recombination KO461_RS01725 PF01488 Shikimate / quinate 5-dehydrogenase KO461_RS01725 PF08501 Shikimate dehydrogenase substrate binding domain KO461_RS01725 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KO461_RS01730 PF00892 EamA-like transporter family KO461_RS01735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KO461_RS01735 PF03466 LysR substrate binding domain KO461_RS01740 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KO461_RS01740 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KO461_RS01745 PF00164 Ribosomal protein S12/S23 KO461_RS01750 PF00177 Ribosomal protein S7p/S5e KO461_RS01755 PF03144 Elongation factor Tu domain 2 KO461_RS01755 PF00009 Elongation factor Tu GTP binding domain KO461_RS01755 PF03764 Elongation factor G, domain IV KO461_RS01755 PF14492 Elongation Factor G, domain II KO461_RS01755 PF00679 Elongation factor G C-terminus KO461_RS01760 PF00009 Elongation factor Tu GTP binding domain KO461_RS01760 PF03143 Elongation factor Tu C-terminal domain KO461_RS01760 PF03144 Elongation factor Tu domain 2 KO461_RS01765 PF13407 Periplasmic binding protein domain KO461_RS01770 PF00005 ABC transporter KO461_RS01775 PF02653 Branched-chain amino acid transport system / permease component KO461_RS01780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KO461_RS01780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KO461_RS01785 PF09371 Tex-like protein N-terminal domain KO461_RS01785 PF17674 HHH domain KO461_RS01785 PF00575 S1 RNA binding domain KO461_RS01785 PF16921 Tex protein YqgF-like domain KO461_RS01795 PF00665 Integrase core domain KO461_RS01795 PF13333 Integrase core domain KO461_RS01795 PF13276 HTH-like domain KO461_RS01800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KO461_RS01800 PF03466 LysR substrate binding domain KO461_RS01805 PF00939 Sodium:sulfate symporter transmembrane region KO461_RS01810 PF00300 Histidine phosphatase superfamily (branch 1) KO461_RS01820 PF01272 Transcription elongation factor, GreA/GreB, C-term KO461_RS01820 PF03449 Transcription elongation factor, N-terminal KO461_RS01830 PF04542 Sigma-70 region 2 KO461_RS01830 PF08281 Sigma-70, region 4 KO461_RS01840 PF02592 Putative vitamin uptake transporter KO461_RS01845 PF07219 HemY protein N-terminus KO461_RS01850 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase KO461_RS01855 PF02602 Uroporphyrinogen-III synthase HemD KO461_RS01860 PF03900 Porphobilinogen deaminase, C-terminal domain KO461_RS01860 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KO461_RS01865 PF01295 Adenylate cyclase, class-I KO461_RS01865 PF12633 Adenylate cyclase NT domain KO461_RS01870 PF00072 Response regulator receiver domain KO461_RS01870 PF00196 Bacterial regulatory proteins, luxR family KO461_RS01875 PF01103 Surface antigen KO461_RS01875 PF17243 POTRA domain TamA domain 1 KO461_RS01880 PF04357 TamB, inner membrane protein subunit of TAM complex KO461_RS01885 PF02541 Ppx/GppA phosphatase family KO461_RS01890 PF01293 Phosphoenolpyruvate carboxykinase KO461_RS01900 PF00293 NUDIX domain KO461_RS01900 PF09297 NADH pyrophosphatase zinc ribbon domain KO461_RS01905 PF01208 Uroporphyrinogen decarboxylase (URO-D) KO461_RS01910 PF04222 Protein of unknown function (DUF416) KO461_RS01915 PF00216 Bacterial DNA-binding protein KO461_RS01920 PF08220 DeoR-like helix-turn-helix domain KO461_RS01920 PF00455 DeoR C terminal sensor domain KO461_RS01925 PF01380 SIS domain KO461_RS01930 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KO461_RS01935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KO461_RS01935 PF03466 LysR substrate binding domain KO461_RS01945 PF00135 Carboxylesterase family KO461_RS01950 PF00248 Aldo/keto reductase family KO461_RS01955 PF00248 Aldo/keto reductase family KO461_RS01960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KO461_RS01960 PF03466 LysR substrate binding domain KO461_RS01970 PF05872 Bacterial protein of unknown function (DUF853) KO461_RS01975 PF03473 MOSC domain KO461_RS01980 PF02810 SEC-C motif KO461_RS01985 PF03631 Virulence factor BrkB KO461_RS01990 PF02580 D-Tyr-tRNA(Tyr) deacylase KO461_RS01995 PF03616 Sodium/glutamate symporter KO461_RS02000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KO461_RS02000 PF16527 Two-component sensor protein CpxA, periplasmic domain KO461_RS02000 PF00512 His Kinase A (phospho-acceptor) domain KO461_RS02000 PF00672 HAMP domain KO461_RS02005 PF00072 Response regulator receiver domain KO461_RS02005 PF00486 Transcriptional regulatory protein, C terminal KO461_RS02010 PF04355 SmpA / OmlA family KO461_RS02015 PF04245 37-kD nucleoid-associated bacterial protein KO461_RS02020 PF07208 Protein of unknown function (DUF1414) KO461_RS02025 PF00884 Sulfatase KO461_RS02025 PF11893 Domain of unknown function (DUF3413) KO461_RS02035 PF03819 MazG nucleotide pyrophosphohydrolase domain KO461_RS02040 PF00582 Universal stress protein family KO461_RS02045 PF02272 DHHA1 domain KO461_RS02045 PF01411 tRNA synthetases class II (A) KO461_RS02045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KO461_RS02050 PF02599 Global regulator protein family KO461_RS02055 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KO461_RS02055 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KO461_RS02055 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KO461_RS02055 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KO461_RS02060 PF00483 Nucleotidyl transferase KO461_RS02065 PF01340 Met Apo-repressor, MetJ KO461_RS02070 PF04452 RNA methyltransferase KO461_RS02075 PF02622 Uncharacterized ACR, COG1678 KO461_RS02080 PF03652 Holliday junction resolvase KO461_RS02085 PF00113 Enolase, C-terminal TIM barrel domain KO461_RS02085 PF03952 Enolase, N-terminal domain KO461_RS02095 PF04400 (Na+)-NQR maturation NqrM KO461_RS02100 PF02424 ApbE family KO461_RS02105 PF00175 Oxidoreductase NAD-binding domain KO461_RS02105 PF00111 2Fe-2S iron-sulfur cluster binding domain KO461_RS02105 PF00970 Oxidoreductase FAD-binding domain KO461_RS02110 PF02508 Rnf-Nqr subunit, membrane protein KO461_RS02115 PF02508 Rnf-Nqr subunit, membrane protein KO461_RS02120 PF04205 FMN-binding domain KO461_RS02125 PF03116 NQR2, RnfD, RnfE family KO461_RS02130 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) KO461_RS02130 PF11973 NQRA C-terminal domain KO461_RS02135 PF01722 BolA-like protein KO461_RS02140 PF03923 Uncharacterized lipoprotein KO461_RS02155 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain KO461_RS02155 PF01464 Transglycosylase SLT domain KO461_RS02160 PF04362 Bacterial Fe(2+) trafficking KO461_RS02165 PF14815 NUDIX domain KO461_RS02165 PF00730 HhH-GPD superfamily base excision DNA repair protein KO461_RS02170 PF02390 Putative methyltransferase KO461_RS02175 PF04320 Protein with unknown function (DUF469) KO461_RS02180 PF01547 Bacterial extracellular solute-binding protein KO461_RS02185 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS02190 PF00005 ABC transporter KO461_RS02195 PF01207 Dihydrouridine synthase (Dus) KO461_RS02200 PF00226 DnaJ domain KO461_RS02200 PF05099 Tellurite resistance protein TerB KO461_RS02205 PF00156 Phosphoribosyl transferase domain KO461_RS02210 PF01138 3' exoribonuclease family, domain 1 KO461_RS02210 PF03725 3' exoribonuclease family, domain 2 KO461_RS02215 PF08340 Domain of unknown function (DUF1732) KO461_RS02215 PF03755 YicC-like family, N-terminal region KO461_RS02220 PF01571 Aminomethyltransferase folate-binding domain KO461_RS02230 PF00318 Ribosomal protein S2 KO461_RS02235 PF00889 Elongation factor TS KO461_RS02240 PF11967 Recombination protein O N terminal KO461_RS02240 PF02565 Recombination protein O C terminal KO461_RS02245 PF01938 TRAM domain KO461_RS02245 PF05958 tRNA (Uracil-5-)-methyltransferase KO461_RS02250 PF13291 ACT domain KO461_RS02250 PF04607 Region found in RelA / SpoT proteins KO461_RS02250 PF02824 TGS domain KO461_RS02255 PF01219 Prokaryotic diacylglycerol kinase KO461_RS02265 PF13649 Methyltransferase domain KO461_RS02270 PF00873 AcrB/AcrD/AcrF family KO461_RS02275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KO461_RS02280 PF00440 Bacterial regulatory proteins, tetR family KO461_RS02285 PF05036 Sporulation related domain KO461_RS02290 PF00270 DEAD/DEAH box helicase KO461_RS02290 PF00271 Helicase conserved C-terminal domain KO461_RS02290 PF17764 3′ DNA-binding domain (3′BD) KO461_RS02290 PF18074 Primosomal protein N C-terminal domain KO461_RS02290 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KO461_RS02295 PF09612 Bacterial protein of unknown function (HtrL_YibB) KO461_RS02305 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) KO461_RS02310 PF01197 Ribosomal protein L31 KO461_RS02315 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) KO461_RS02330 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KO461_RS02330 PF06827 Zinc finger found in FPG and IleRS KO461_RS02330 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KO461_RS02335 PF00471 Ribosomal protein L33 KO461_RS02340 PF00830 Ribosomal L28 family KO461_RS02345 PF04002 RadC-like JAB domain KO461_RS02350 PF04127 DNA / pantothenate metabolism flavoprotein KO461_RS02350 PF02441 Flavoprotein KO461_RS02355 PF00692 dUTPase KO461_RS02360 PF00440 Bacterial regulatory proteins, tetR family KO461_RS02365 PF06794 Uncharacterised protein family (UPF0270) KO461_RS02370 PF13545 Crp-like helix-turn-helix domain KO461_RS02370 PF00027 Cyclic nucleotide-binding domain KO461_RS02375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KO461_RS02375 PF07992 Pyridine nucleotide-disulphide oxidoreductase KO461_RS02380 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KO461_RS02385 PF17092 Penicillin-binding protein OB-like domain KO461_RS02385 PF00912 Transglycosylase KO461_RS02385 PF00905 Penicillin binding protein transpeptidase domain KO461_RS02390 PF11104 Type IV pilus assembly protein PilM; KO461_RS02410 PF00263 Bacterial type II and III secretion system protein KO461_RS02410 PF03958 Bacterial type II/III secretion system short domain KO461_RS02415 PF01202 Shikimate kinase KO461_RS02420 PF01761 3-dehydroquinate synthase KO461_RS02425 PF02086 D12 class N6 adenine-specific DNA methyltransferase KO461_RS02440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KO461_RS02455 PF02810 SEC-C motif KO461_RS02455 PF07517 SecA DEAD-like domain KO461_RS02455 PF01043 SecA preprotein cross-linking domain KO461_RS02455 PF07516 SecA Wing and Scaffold domain KO461_RS02460 PF00873 AcrB/AcrD/AcrF family KO461_RS02465 PF00436 Single-strand binding protein family KO461_RS02470 PF17760 UvrA interaction domain KO461_RS02470 PF17755 UvrA DNA-binding domain KO461_RS02480 PF13333 Integrase core domain KO461_RS02480 PF00665 Integrase core domain KO461_RS02480 PF13276 HTH-like domain KO461_RS02485 PF13411 MerR HTH family regulatory protein KO461_RS02490 PF05258 Dna[CI] antecedent, DciA KO461_RS02500 PF02810 SEC-C motif KO461_RS02500 PF07517 SecA DEAD-like domain KO461_RS02500 PF01043 SecA preprotein cross-linking domain KO461_RS02500 PF07516 SecA Wing and Scaffold domain KO461_RS02505 PF00293 NUDIX domain KO461_RS02510 PF14840 Processivity clamp loader gamma complex DNA pol III C-term KO461_RS02510 PF06144 DNA polymerase III, delta subunit KO461_RS02515 PF04390 Lipopolysaccharide-assembly KO461_RS02520 PF08264 Anticodon-binding domain of tRNA KO461_RS02520 PF00133 tRNA synthetases class I (I, L, M and V) KO461_RS02520 PF13603 Leucyl-tRNA synthetase, Domain 2 KO461_RS02530 PF01909 Nucleotidyltransferase domain KO461_RS02535 PF08780 Nucleotidyltransferase substrate binding protein like KO461_RS02540 PF00149 Calcineurin-like phosphoesterase KO461_RS02545 PF00398 Ribosomal RNA adenine dimethylase KO461_RS02550 PF00639 PPIC-type PPIASE domain KO461_RS02550 PF09312 SurA N-terminal domain KO461_RS02555 PF00156 Phosphoribosyl transferase domain KO461_RS02565 PF04356 Protein of unknown function (DUF489) KO461_RS02570 PF08328 Adenylosuccinate lyase C-terminal KO461_RS02570 PF00206 Lyase KO461_RS02580 PF00106 short chain dehydrogenase KO461_RS02590 PF08240 Alcohol dehydrogenase GroES-like domain KO461_RS02590 PF00107 Zinc-binding dehydrogenase KO461_RS02595 PF00756 Putative esterase KO461_RS02600 PF00448 SRP54-type protein, GTPase domain KO461_RS02600 PF02881 SRP54-type protein, helical bundle domain KO461_RS02600 PF02978 Signal peptide binding domain KO461_RS02605 PF01578 Cytochrome C assembly protein KO461_RS02610 PF01595 Cyclin M transmembrane N-terminal domain KO461_RS02610 PF03471 Transporter associated domain KO461_RS02610 PF00571 CBS domain KO461_RS02615 PF01618 MotA/TolQ/ExbB proton channel family KO461_RS02620 PF02472 Biopolymer transport protein ExbD/TolR KO461_RS02625 PF03544 Gram-negative bacterial TonB protein C-terminal KO461_RS02630 PF01435 Peptidase family M48 KO461_RS02635 PF00719 Inorganic pyrophosphatase KO461_RS02640 PF03222 Tryptophan/tyrosine permease family KO461_RS02650 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KO461_RS02655 PF00227 Proteasome subunit KO461_RS02660 PF07724 AAA domain (Cdc48 subfamily) KO461_RS02660 PF00004 ATPase family associated with various cellular activities (AAA) KO461_RS02660 PF10431 C-terminal, D2-small domain, of ClpB protein KO461_RS02665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KO461_RS02670 PF04333 MlaA lipoprotein KO461_RS02675 PF03887 YfbU domain KO461_RS02685 PF04717 Type VI secretion system, phage-baseplate injector KO461_RS02710 PF00186 Dihydrofolate reductase KO461_RS02720 PF06738 Putative threonine/serine exporter KO461_RS02730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KO461_RS02730 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KO461_RS02735 PF02666 Phosphatidylserine decarboxylase KO461_RS02740 PF00202 Aminotransferase class-III KO461_RS02745 PF00155 Aminotransferase class I and II KO461_RS02755 PF08241 Methyltransferase domain KO461_RS02765 PF02620 Large ribosomal RNA subunit accumulation protein YceD KO461_RS02770 PF01783 Ribosomal L32p protein family KO461_RS02775 PF02504 Fatty acid synthesis protein KO461_RS02780 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KO461_RS02780 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KO461_RS02785 PF00698 Acyl transferase domain KO461_RS02795 PF00550 Phosphopantetheine attachment site KO461_RS02800 PF07690 Major Facilitator Superfamily KO461_RS02805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KO461_RS02805 PF07498 Rho termination factor, N-terminal domain KO461_RS02805 PF07497 Rho termination factor, RNA-binding domain KO461_RS02810 PF00271 Helicase conserved C-terminal domain KO461_RS02810 PF00270 DEAD/DEAH box helicase KO461_RS02820 PF02590 Predicted SPOUT methyltransferase KO461_RS02825 PF03717 Penicillin-binding Protein dimerisation domain KO461_RS02825 PF00905 Penicillin binding protein transpeptidase domain KO461_RS02830 PF01098 Cell cycle protein KO461_RS02835 PF05036 Sporulation related domain KO461_RS02835 PF03330 Lytic transglycolase KO461_RS02840 PF07943 Penicillin-binding protein 5, C-terminal domain KO461_RS02840 PF00768 D-alanyl-D-alanine carboxypeptidase KO461_RS02845 PF04359 Protein of unknown function (DUF493) KO461_RS02850 PF03099 Biotin/lipoate A/B protein ligase family KO461_RS02855 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KO461_RS02855 PF04055 Radical SAM superfamily KO461_RS02870 PF01266 FAD dependent oxidoreductase KO461_RS02875 PF00497 Bacterial extracellular solute-binding proteins, family 3 KO461_RS02880 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS02885 PF00005 ABC transporter KO461_RS02890 PF04077 DsrH like protein KO461_RS02895 PF02635 DsrE/DsrF-like family KO461_RS02900 PF02635 DsrE/DsrF-like family KO461_RS02905 PF08348 YheO-like PAS domain KO461_RS02905 PF13309 HTH domain KO461_RS02910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KO461_RS02910 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KO461_RS02915 PF04102 SlyX KO461_RS02920 PF00462 Glutaredoxin KO461_RS02920 PF08534 Redoxin KO461_RS02925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KO461_RS02925 PF03466 LysR substrate binding domain KO461_RS02930 PF00440 Bacterial regulatory proteins, tetR family KO461_RS02935 PF00005 ABC transporter KO461_RS02935 PF00664 ABC transporter transmembrane region KO461_RS02940 PF00664 ABC transporter transmembrane region KO461_RS02940 PF00005 ABC transporter KO461_RS02945 PF03605 Anaerobic c4-dicarboxylate membrane transporter KO461_RS02950 PF00581 Rhodanese-like domain KO461_RS02955 PF02556 Preprotein translocase subunit SecB KO461_RS02960 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KO461_RS02960 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KO461_RS02965 PF00132 Bacterial transferase hexapeptide (six repeats) KO461_RS02965 PF06426 Serine acetyltransferase, N-terminal KO461_RS02975 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KO461_RS02980 PF06005 Cell division protein ZapB KO461_RS02985 PF00258 Flavodoxin KO461_RS02990 PF13932 GidA associated domain KO461_RS02990 PF01134 Glucose inhibited division protein A KO461_RS02995 PF05368 NmrA-like family KO461_RS03000 PF01638 HxlR-like helix-turn-helix KO461_RS03005 PF02527 rRNA small subunit methyltransferase G KO461_RS03010 PF03899 ATP synthase I chain KO461_RS03015 PF00119 ATP synthase A chain KO461_RS03020 PF00137 ATP synthase subunit C KO461_RS03025 PF00430 ATP synthase B/B' CF(0) KO461_RS03030 PF00213 ATP synthase delta (OSCP) subunit KO461_RS03035 PF02874 ATP synthase alpha/beta family, beta-barrel domain KO461_RS03035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KO461_RS03035 PF00306 ATP synthase alpha/beta chain, C terminal domain KO461_RS03040 PF00231 ATP synthase KO461_RS03045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KO461_RS03045 PF02874 ATP synthase alpha/beta family, beta-barrel domain KO461_RS03050 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KO461_RS03055 PF13416 Bacterial extracellular solute-binding protein KO461_RS03060 PF01380 SIS domain KO461_RS03065 PF03702 Anhydro-N-acetylmuramic acid kinase KO461_RS03070 PF00132 Bacterial transferase hexapeptide (six repeats) KO461_RS03070 PF12804 MobA-like NTP transferase domain KO461_RS03080 PF00455 DeoR C terminal sensor domain KO461_RS03080 PF08220 DeoR-like helix-turn-helix domain KO461_RS03085 PF01791 DeoC/LacD family aldolase KO461_RS03120 PF04717 Type VI secretion system, phage-baseplate injector KO461_RS03205 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KO461_RS03205 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KO461_RS03210 PF00118 TCP-1/cpn60 chaperonin family KO461_RS03215 PF00166 Chaperonin 10 Kd subunit KO461_RS03225 PF00206 Lyase KO461_RS03225 PF10415 Fumarase C C-terminus KO461_RS03230 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KO461_RS03240 PF03613 PTS system mannose/fructose/sorbose family IID component KO461_RS03245 PF03609 PTS system sorbose-specific iic component KO461_RS03250 PF03610 PTS system fructose IIA component KO461_RS03250 PF03830 PTS system sorbose subfamily IIB component KO461_RS03255 PF07690 Major Facilitator Superfamily KO461_RS03260 PF12833 Helix-turn-helix domain KO461_RS03265 PF03553 Na+/H+ antiporter family KO461_RS03275 PF02653 Branched-chain amino acid transport system / permease component KO461_RS03280 PF00005 ABC transporter KO461_RS03295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KO461_RS03295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KO461_RS03305 PF13356 Arm DNA-binding domain KO461_RS03305 PF00589 Phage integrase family KO461_RS03355 PF08346 AntA/AntB antirepressor KO461_RS03355 PF10548 P22AR C-terminal domain KO461_RS03395 PF04993 TfoX N-terminal domain KO461_RS03395 PF04994 TfoX C-terminal domain KO461_RS03400 PF04542 Sigma-70 region 2 KO461_RS03400 PF04545 Sigma-70, region 4 KO461_RS03400 PF00140 Sigma-70 factor, region 1.2 KO461_RS03410 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KO461_RS03410 PF01565 FAD binding domain KO461_RS03415 PF00672 HAMP domain KO461_RS03415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KO461_RS03415 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KO461_RS03415 PF07730 Histidine kinase KO461_RS03420 PF03927 NapD protein KO461_RS03425 PF00384 Molybdopterin oxidoreductase KO461_RS03425 PF01568 Molydopterin dinucleotide binding domain KO461_RS03425 PF10518 TAT (twin-arginine translocation) pathway signal sequence KO461_RS03425 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KO461_RS03430 PF12838 4Fe-4S dicluster domain KO461_RS03430 PF12800 4Fe-4S binding domain KO461_RS03435 PF12837 4Fe-4S binding domain KO461_RS03435 PF12801 4Fe-4S binding domain KO461_RS03440 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) KO461_RS03445 PF03264 NapC/NirT cytochrome c family, N-terminal region KO461_RS03450 PF05257 CHAP domain KO461_RS03450 PF03738 Glutathionylspermidine synthase preATP-grasp KO461_RS03455 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KO461_RS03460 PF02661 Fic/DOC family KO461_RS03465 PF01370 NAD dependent epimerase/dehydratase family KO461_RS03475 PF02872 5'-nucleotidase, C-terminal domain KO461_RS03475 PF00149 Calcineurin-like phosphoesterase KO461_RS03495 PF02801 Beta-ketoacyl synthase, C-terminal domain KO461_RS03495 PF00109 Beta-ketoacyl synthase, N-terminal domain KO461_RS03510 PF00109 Beta-ketoacyl synthase, N-terminal domain KO461_RS03510 PF02801 Beta-ketoacyl synthase, C-terminal domain KO461_RS03565 PF00550 Phosphopantetheine attachment site KO461_RS03590 PF13419 Haloacid dehalogenase-like hydrolase KO461_RS03595 PF02899 Phage integrase, N-terminal SAM-like domain KO461_RS03595 PF00589 Phage integrase family KO461_RS03600 PF01678 Diaminopimelate epimerase KO461_RS03605 PF00551 Formyl transferase KO461_RS03610 PF02769 AIR synthase related protein, C-terminal domain KO461_RS03610 PF00586 AIR synthase related protein, N-terminal domain KO461_RS03615 PF16747 Surface-adhesin protein E KO461_RS03620 PF10431 C-terminal, D2-small domain, of ClpB protein KO461_RS03620 PF02861 Clp amino terminal domain, pathogenicity island component KO461_RS03620 PF07724 AAA domain (Cdc48 subfamily) KO461_RS03620 PF17871 AAA lid domain KO461_RS03620 PF00004 ATPase family associated with various cellular activities (AAA) KO461_RS03625 PF10531 SLBB domain KO461_RS03630 PF01118 Semialdehyde dehydrogenase, NAD binding domain KO461_RS03630 PF02774 Semialdehyde dehydrogenase, dimerisation domain KO461_RS03640 PF00156 Phosphoribosyl transferase domain KO461_RS03645 PF01106 NifU-like domain KO461_RS03645 PF01521 Iron-sulphur cluster biosynthesis KO461_RS03650 PF01502 Phosphoribosyl-AMP cyclohydrolase KO461_RS03650 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KO461_RS03655 PF05525 Branched-chain amino acid transport protein KO461_RS03660 PF06418 CTP synthase N-terminus KO461_RS03660 PF00117 Glutamine amidotransferase class-I KO461_RS03665 PF05746 DALR anticodon binding domain KO461_RS03665 PF02092 Glycyl-tRNA synthetase beta subunit KO461_RS03675 PF06250 YhcG PDDEXK nuclease domain KO461_RS03675 PF17761 DUF1016 N-terminal domain KO461_RS03690 PF02091 Glycyl-tRNA synthetase alpha subunit KO461_RS03700 PF02613 Nitrate reductase delta subunit KO461_RS03705 PF04976 DMSO reductase anchor subunit (DmsC) KO461_RS03710 PF13247 4Fe-4S dicluster domain KO461_RS03710 PF12800 4Fe-4S binding domain KO461_RS03725 PF00476 DNA polymerase family A KO461_RS03725 PF01612 3'-5' exonuclease KO461_RS03725 PF01367 5'-3' exonuclease, C-terminal SAM fold KO461_RS03725 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KO461_RS03735 PF07119 Protein of unknown function (DUF1375) KO461_RS03740 PF00580 UvrD/REP helicase N-terminal domain KO461_RS03740 PF13361 UvrD-like helicase C-terminal domain KO461_RS03760 PF00874 PRD domain KO461_RS03765 PF13419 Haloacid dehalogenase-like hydrolase KO461_RS03770 PF12464 Maltose acetyltransferase KO461_RS03770 PF00132 Bacterial transferase hexapeptide (six repeats) KO461_RS03780 PF02664 S-Ribosylhomocysteinase (LuxS) KO461_RS03810 PF13276 HTH-like domain KO461_RS03810 PF00665 Integrase core domain KO461_RS03810 PF13333 Integrase core domain KO461_RS03850 PF13617 YnbE-like lipoprotein KO461_RS03860 PF01914 MarC family integral membrane protein KO461_RS03865 PF00005 ABC transporter KO461_RS03865 PF12848 ABC transporter KO461_RS03870 PF00154 recA bacterial DNA recombination protein KO461_RS03875 PF02631 RecX family KO461_RS03880 PF01042 Endoribonuclease L-PSP KO461_RS03885 PF02779 Transketolase, pyrimidine binding domain KO461_RS03885 PF02780 Transketolase, C-terminal domain KO461_RS03885 PF00456 Transketolase, thiamine diphosphate binding domain KO461_RS03890 PF00923 Transaldolase/Fructose-6-phosphate aldolase KO461_RS03915 PF13936 Helix-turn-helix domain KO461_RS03915 PF00665 Integrase core domain KO461_RS03930 PF00665 Integrase core domain KO461_RS03930 PF13276 HTH-like domain KO461_RS03930 PF13333 Integrase core domain KO461_RS03945 PF00270 DEAD/DEAH box helicase KO461_RS03945 PF00271 Helicase conserved C-terminal domain KO461_RS03950 PF05175 Methyltransferase small domain KO461_RS03955 PF04973 Nicotinamide mononucleotide transporter KO461_RS03960 PF00849 RNA pseudouridylate synthase KO461_RS03965 PF04717 Type VI secretion system, phage-baseplate injector KO461_RS03970 PF04220 Der GTPase activator (YihI) KO461_RS03975 PF10675 Protein of unknown function (DUF2489) KO461_RS03980 PF06969 HemN C-terminal domain KO461_RS03980 PF04055 Radical SAM superfamily KO461_RS03990 PF00121 Triosephosphate isomerase KO461_RS03995 PF00378 Enoyl-CoA hydratase/isomerase KO461_RS04010 PF13378 Enolase C-terminal domain-like KO461_RS04015 PF01220 Dehydroquinase class II KO461_RS04020 PF00364 Biotin-requiring enzyme KO461_RS04025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KO461_RS04025 PF00289 Biotin carboxylase, N-terminal domain KO461_RS04025 PF02785 Biotin carboxylase C-terminal domain KO461_RS04030 PF17483 C-lobe handle domain of Tf-binding protein B KO461_RS04030 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B KO461_RS04030 PF17484 N-Lobe handle Tf-binding protein B KO461_RS04035 PF04575 Protein of unknown function (DUF560) KO461_RS04040 PF06196 Protein of unknown function (DUF997) KO461_RS04045 PF00474 Sodium:solute symporter family KO461_RS04050 PF02661 Fic/DOC family KO461_RS04060 PF01207 Dihydrouridine synthase (Dus) KO461_RS04065 PF02954 Bacterial regulatory protein, Fis family KO461_RS04070 PF17311 Family of unknown function (DUF5358) KO461_RS04075 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KO461_RS04080 PF01235 Sodium:alanine symporter family KO461_RS04090 PF03884 DNA gyrase inhibitor YacG KO461_RS04095 PF01121 Dephospho-CoA kinase KO461_RS04100 PF13333 Integrase core domain KO461_RS04100 PF00665 Integrase core domain KO461_RS04100 PF13276 HTH-like domain KO461_RS04115 PF13276 HTH-like domain KO461_RS04115 PF13333 Integrase core domain KO461_RS04115 PF00665 Integrase core domain KO461_RS04140 PF04262 Glutamate-cysteine ligase KO461_RS04140 PF02655 ATP-grasp domain KO461_RS04140 PF18419 ATP-grasp-like domain KO461_RS04145 PF00884 Sulfatase KO461_RS04150 PF00574 Clp protease KO461_RS04155 PF07724 AAA domain (Cdc48 subfamily) KO461_RS04155 PF10431 C-terminal, D2-small domain, of ClpB protein KO461_RS04155 PF06689 ClpX C4-type zinc finger KO461_RS04170 PF05675 Protein of unknown function (DUF817) KO461_RS04175 PF00403 Heavy-metal-associated domain KO461_RS04180 PF00403 Heavy-metal-associated domain KO461_RS04200 PF00717 Peptidase S24-like KO461_RS04200 PF01381 Helix-turn-helix KO461_RS04205 PF04997 RNA polymerase Rpb1, domain 1 KO461_RS04205 PF00623 RNA polymerase Rpb1, domain 2 KO461_RS04205 PF04983 RNA polymerase Rpb1, domain 3 KO461_RS04205 PF05000 RNA polymerase Rpb1, domain 4 KO461_RS04205 PF04998 RNA polymerase Rpb1, domain 5 KO461_RS04210 PF04563 RNA polymerase beta subunit KO461_RS04210 PF04561 RNA polymerase Rpb2, domain 2 KO461_RS04210 PF00562 RNA polymerase Rpb2, domain 6 KO461_RS04210 PF10385 RNA polymerase beta subunit external 1 domain KO461_RS04210 PF04560 RNA polymerase Rpb2, domain 7 KO461_RS04210 PF04565 RNA polymerase Rpb2, domain 3 KO461_RS04215 PF00542 Ribosomal protein L7/L12 C-terminal domain KO461_RS04215 PF16320 Ribosomal protein L7/L12 dimerisation domain KO461_RS04220 PF00466 Ribosomal protein L10 KO461_RS04225 PF00687 Ribosomal protein L1p/L10e family KO461_RS04230 PF00298 Ribosomal protein L11, RNA binding domain KO461_RS04230 PF03946 Ribosomal protein L11, N-terminal domain KO461_RS04235 PF00467 KOW motif KO461_RS04235 PF02357 Transcription termination factor nusG KO461_RS04240 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KO461_RS04290 PF00482 Type II secretion system (T2SS), protein F KO461_RS04300 PF07963 Prokaryotic N-terminal methylation motif KO461_RS04305 PF01510 N-acetylmuramoyl-L-alanine amidase KO461_RS04310 PF04074 YhcH/YjgK/YiaL KO461_RS04315 PF00575 S1 RNA binding domain KO461_RS04315 PF00013 KH domain KO461_RS04315 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KO461_RS04315 PF01138 3' exoribonuclease family, domain 1 KO461_RS04315 PF03725 3' exoribonuclease family, domain 2 KO461_RS04325 PF00271 Helicase conserved C-terminal domain KO461_RS04325 PF03880 DbpA RNA binding domain KO461_RS04325 PF00270 DEAD/DEAH box helicase KO461_RS04330 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KO461_RS04330 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KO461_RS04340 PF13556 PucR C-terminal helix-turn-helix domain KO461_RS04340 PF05651 Putative sugar diacid recognition KO461_RS04340 PF17853 GGDEF-like domain KO461_RS04345 PF02447 GntP family permease KO461_RS04350 PF02595 Glycerate kinase family KO461_RS04355 PF00156 Phosphoribosyl transferase domain KO461_RS04360 PF01523 Putative modulator of DNA gyrase KO461_RS04365 PF04751 Protein of unknown function (DUF615) KO461_RS04370 PF00939 Sodium:sulfate symporter transmembrane region KO461_RS04375 PF03737 Aldolase/RraA KO461_RS04380 PF01040 UbiA prenyltransferase family KO461_RS04385 PF01980 tRNA-methyltransferase O KO461_RS04385 PF18389 TrmO C-terminal domain KO461_RS04410 PF18075 FtsX extracellular domain KO461_RS04415 PF00005 ABC transporter KO461_RS04420 PF00448 SRP54-type protein, GTPase domain KO461_RS04420 PF02881 SRP54-type protein, helical bundle domain KO461_RS04430 PF03830 PTS system sorbose subfamily IIB component KO461_RS04430 PF03610 PTS system fructose IIA component KO461_RS04435 PF03609 PTS system sorbose-specific iic component KO461_RS04440 PF03613 PTS system mannose/fructose/sorbose family IID component KO461_RS04450 PF01773 Na+ dependent nucleoside transporter N-terminus KO461_RS04450 PF07662 Na+ dependent nucleoside transporter C-terminus KO461_RS04450 PF07670 Nucleoside recognition KO461_RS04455 PF01048 Phosphorylase superfamily KO461_RS04465 PF14883 Hypothetical glycosyl hydrolase family 13 KO461_RS04465 PF01522 Polysaccharide deacetylase KO461_RS04470 PF00535 Glycosyl transferase family 2 KO461_RS04480 PF07690 Major Facilitator Superfamily KO461_RS04485 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KO461_RS04485 PF01243 Pyridoxamine 5'-phosphate oxidase KO461_RS04505 PF00665 Integrase core domain KO461_RS04505 PF13333 Integrase core domain KO461_RS04505 PF13276 HTH-like domain KO461_RS04525 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KO461_RS04525 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KO461_RS04530 PF00625 Guanylate kinase KO461_RS04535 PF01192 RNA polymerase Rpb6 KO461_RS04540 PF13291 ACT domain KO461_RS04540 PF04607 Region found in RelA / SpoT proteins KO461_RS04540 PF02824 TGS domain KO461_RS04545 PF17191 RecG wedge domain KO461_RS04545 PF00271 Helicase conserved C-terminal domain KO461_RS04545 PF00270 DEAD/DEAH box helicase KO461_RS04550 PF04345 Chorismate lyase KO461_RS04555 PF01177 Asp/Glu/Hydantoin racemase KO461_RS04580 PF13936 Helix-turn-helix domain KO461_RS04580 PF00665 Integrase core domain KO461_RS04590 PF13276 HTH-like domain KO461_RS04590 PF00665 Integrase core domain KO461_RS04590 PF13333 Integrase core domain KO461_RS04635 PF00437 Type II/IV secretion system protein KO461_RS04650 PF04972 BON domain KO461_RS04650 PF13629 Pilus formation protein N terminal region KO461_RS04650 PF00263 Bacterial type II and III secretion system protein KO461_RS04675 PF02130 Uncharacterized protein family UPF0054 KO461_RS04685 PF17176 tRNA-binding domain KO461_RS04685 PF05127 Helicase KO461_RS04685 PF13718 GNAT acetyltransferase 2 KO461_RS04695 PF02559 CarD-like/TRCF domain KO461_RS04695 PF00270 DEAD/DEAH box helicase KO461_RS04695 PF00271 Helicase conserved C-terminal domain KO461_RS04695 PF03461 TRCF domain KO461_RS04695 PF17757 UvrB interaction domain KO461_RS04700 PF13580 SIS domain KO461_RS04705 PF00005 ABC transporter KO461_RS04710 PF00497 Bacterial extracellular solute-binding proteins, family 3 KO461_RS04715 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS04720 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS04725 PF02554 Carbon starvation protein CstA KO461_RS04730 PF02381 MraZ protein, putative antitoxin-like KO461_RS04735 PF01795 MraW methylase family KO461_RS04740 PF04999 Cell division protein FtsL KO461_RS04745 PF00905 Penicillin binding protein transpeptidase domain KO461_RS04745 PF03717 Penicillin-binding Protein dimerisation domain KO461_RS04750 PF02875 Mur ligase family, glutamate ligase domain KO461_RS04750 PF08245 Mur ligase middle domain KO461_RS04750 PF01225 Mur ligase family, catalytic domain KO461_RS04755 PF01225 Mur ligase family, catalytic domain KO461_RS04755 PF02875 Mur ligase family, glutamate ligase domain KO461_RS04755 PF08245 Mur ligase middle domain KO461_RS04760 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KO461_RS04760 PF00953 Glycosyl transferase family 4 KO461_RS04765 PF08245 Mur ligase middle domain KO461_RS04765 PF02875 Mur ligase family, glutamate ligase domain KO461_RS04770 PF01098 Cell cycle protein KO461_RS04775 PF04101 Glycosyltransferase family 28 C-terminal domain KO461_RS04775 PF03033 Glycosyltransferase family 28 N-terminal domain KO461_RS04780 PF01225 Mur ligase family, catalytic domain KO461_RS04780 PF02875 Mur ligase family, glutamate ligase domain KO461_RS04780 PF08245 Mur ligase middle domain KO461_RS04785 PF07478 D-ala D-ala ligase C-terminus KO461_RS04785 PF01820 D-ala D-ala ligase N-terminus KO461_RS04790 PF08478 POTRA domain, FtsQ-type KO461_RS04790 PF03799 Cell division protein FtsQ KO461_RS04795 PF02491 SHS2 domain inserted in FTSA KO461_RS04800 PF12327 FtsZ family, C-terminal domain KO461_RS04800 PF00091 Tubulin/FtsZ family, GTPase domain KO461_RS04805 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KO461_RS04810 PF01817 Chorismate mutase type II KO461_RS04810 PF00800 Prephenate dehydratase KO461_RS04815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KO461_RS04815 PF00183 Hsp90 protein KO461_RS04820 PF03960 ArsC family KO461_RS04825 PF07687 Peptidase dimerisation domain KO461_RS04825 PF01546 Peptidase family M20/M25/M40 KO461_RS04830 PF02557 D-alanyl-D-alanine carboxypeptidase KO461_RS04835 PF00293 NUDIX domain KO461_RS04840 PF00149 Calcineurin-like phosphoesterase KO461_RS04865 PF06508 Queuosine biosynthesis protein QueC KO461_RS04875 PF00107 Zinc-binding dehydrogenase KO461_RS04875 PF08240 Alcohol dehydrogenase GroES-like domain KO461_RS04880 PF02926 THUMP domain KO461_RS04880 PF01170 Putative RNA methylase family UPF0020 KO461_RS04880 PF10672 S-adenosylmethionine-dependent methyltransferase KO461_RS04885 PF02313 Fumarate reductase subunit D KO461_RS04890 PF02300 Fumarate reductase subunit C KO461_RS04895 PF13085 2Fe-2S iron-sulfur cluster binding domain KO461_RS04895 PF13183 4Fe-4S dicluster domain KO461_RS04900 PF00890 FAD binding domain KO461_RS04900 PF02910 Fumarate reductase flavoprotein C-term KO461_RS04905 PF00152 tRNA synthetases class II (D, K and N) KO461_RS04910 PF00005 ABC transporter KO461_RS04915 PF01032 FecCD transport family KO461_RS04920 PF01032 FecCD transport family KO461_RS04925 PF01497 Periplasmic binding protein KO461_RS04930 PF00149 Calcineurin-like phosphoesterase KO461_RS04935 PF02575 YbaB/EbfC DNA-binding family KO461_RS04940 PF02132 RecR protein KO461_RS04940 PF13662 Toprim domain KO461_RS04945 PF01131 DNA topoisomerase KO461_RS04945 PF01751 Toprim domain KO461_RS04950 PF03840 Preprotein translocase SecG subunit KO461_RS04965 PF00912 Transglycosylase KO461_RS04970 PF01371 Trp repressor protein KO461_RS04975 PF01464 Transglycosylase SLT domain KO461_RS04975 PF14718 Soluble lytic murein transglycosylase L domain KO461_RS04980 PF03795 YCII-related domain KO461_RS04985 PF03061 Thioesterase superfamily KO461_RS04990 PF04279 Intracellular septation protein A KO461_RS05000 PF03922 OmpW family KO461_RS05005 PF02463 RecF/RecN/SMC N terminal domain KO461_RS05010 PF01513 ATP-NAD kinase KO461_RS05015 PF01025 GrpE KO461_RS05020 PF07715 TonB-dependent Receptor Plug Domain KO461_RS05020 PF04886 PT repeat KO461_RS05020 PF00593 TonB dependent receptor KO461_RS05025 PF01266 FAD dependent oxidoreductase KO461_RS05025 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KO461_RS05030 PF00109 Beta-ketoacyl synthase, N-terminal domain KO461_RS05030 PF02801 Beta-ketoacyl synthase, C-terminal domain KO461_RS05035 PF00072 Response regulator receiver domain KO461_RS05035 PF00989 PAS fold KO461_RS05035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KO461_RS05035 PF18415 Histidine kinase receptor ArcB trans-membrane domain KO461_RS05035 PF00512 His Kinase A (phospho-acceptor) domain KO461_RS05035 PF01627 Hpt domain KO461_RS05040 PF02653 Branched-chain amino acid transport system / permease component KO461_RS05045 PF00005 ABC transporter KO461_RS05050 PF13407 Periplasmic binding protein domain KO461_RS05055 PF00356 Bacterial regulatory proteins, lacI family KO461_RS05060 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KO461_RS05060 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KO461_RS05065 PF10509 Galactokinase galactose-binding signature KO461_RS05065 PF08544 GHMP kinases C terminal KO461_RS05065 PF00288 GHMP kinases N terminal domain KO461_RS05070 PF01263 Aldose 1-epimerase KO461_RS05090 PF00939 Sodium:sulfate symporter transmembrane region KO461_RS05095 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KO461_RS05095 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase KO461_RS05100 PF04223 Citrate lyase, alpha subunit (CitF) KO461_RS05105 PF03328 HpcH/HpaI aldolase/citrate lyase family KO461_RS05110 PF06857 Malonate decarboxylase delta subunit (MdcD) KO461_RS05115 PF08218 Citrate lyase ligase C-terminal domain KO461_RS05120 PF03471 Transporter associated domain KO461_RS05120 PF00571 CBS domain KO461_RS05125 PF00795 Carbon-nitrogen hydrolase KO461_RS05130 PF01176 Translation initiation factor 1A / IF-1 KO461_RS05135 PF00883 Cytosol aminopeptidase family, catalytic domain KO461_RS05135 PF12404 Peptidase KO461_RS05140 PF00334 Nucleoside diphosphate kinase KO461_RS05145 PF00728 Glycosyl hydrolase family 20, catalytic domain KO461_RS05145 PF02838 Glycosyl hydrolase family 20, domain 2 KO461_RS05145 PF03173 Putative carbohydrate binding domain KO461_RS05145 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain KO461_RS05160 PF01476 LysM domain KO461_RS05160 PF01551 Peptidase family M23 KO461_RS05170 PF09335 SNARE associated Golgi protein KO461_RS05175 PF01975 Survival protein SurE KO461_RS05180 PF01142 tRNA pseudouridine synthase D (TruD) KO461_RS05185 PF02542 YgbB family KO461_RS05190 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KO461_RS05195 PF04977 Septum formation initiator KO461_RS05200 PF00834 Ribulose-phosphate 3 epimerase family KO461_RS05205 PF13419 Haloacid dehalogenase-like hydrolase KO461_RS05210 PF00579 tRNA synthetases class I (W and Y) KO461_RS05215 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KO461_RS05235 PF02308 MgtC family KO461_RS05250 PF13936 Helix-turn-helix domain KO461_RS05250 PF00665 Integrase core domain KO461_RS05295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KO461_RS05300 PF00294 pfkB family carbohydrate kinase KO461_RS05305 PF00381 PTS HPr component phosphorylation site KO461_RS05305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KO461_RS05315 PF12804 MobA-like NTP transferase domain KO461_RS05320 PF06288 Protein of unknown function (DUF1040) KO461_RS05325 PF01323 DSBA-like thioredoxin domain KO461_RS05330 PF04219 Protein of unknown function, DUF KO461_RS05335 PF05958 tRNA (Uracil-5-)-methyltransferase KO461_RS05340 PF04445 Putative SAM-dependent methyltransferase KO461_RS05370 PF01624 MutS domain I KO461_RS05370 PF05188 MutS domain II KO461_RS05370 PF05192 MutS domain III KO461_RS05370 PF05190 MutS family domain IV KO461_RS05370 PF00488 MutS domain V KO461_RS05385 PF04199 Putative cyclase KO461_RS05395 PF02447 GntP family permease KO461_RS05400 PF01261 Xylose isomerase-like TIM barrel KO461_RS05405 PF00596 Class II Aldolase and Adducin N-terminal domain KO461_RS05410 PF07005 Sugar-binding N-terminal domain KO461_RS05410 PF17042 Nucleotide-binding C-terminal domain KO461_RS05415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KO461_RS05415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KO461_RS05420 PF00455 DeoR C terminal sensor domain KO461_RS05420 PF08220 DeoR-like helix-turn-helix domain KO461_RS05425 PF00543 Nitrogen regulatory protein P-II KO461_RS05430 PF02618 YceG-like family KO461_RS05435 PF02223 Thymidylate kinase KO461_RS05440 PF09115 DNA polymerase III, delta subunit, C terminal KO461_RS05445 PF01026 TatD related DNase KO461_RS05450 PF07509 Protein of unknown function (DUF1523) KO461_RS05455 PF01595 Cyclin M transmembrane N-terminal domain KO461_RS05455 PF00571 CBS domain KO461_RS05455 PF03471 Transporter associated domain KO461_RS05460 PF13340 Putative transposase of IS4/5 family (DUF4096) KO461_RS05475 PF00300 Histidine phosphatase superfamily (branch 1) KO461_RS05480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KO461_RS05480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KO461_RS05480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KO461_RS05480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KO461_RS05485 PF01551 Peptidase family M23 KO461_RS05490 PF04748 Divergent polysaccharide deacetylase KO461_RS05505 PF00665 Integrase core domain KO461_RS05530 PF17728 BsuBI/PstI restriction endonuclease HTH domain KO461_RS05530 PF06616 BsuBI/PstI restriction endonuclease domain KO461_RS05535 PF07669 Eco57I restriction-modification methylase KO461_RS05540 PF00580 UvrD/REP helicase N-terminal domain KO461_RS05540 PF13361 UvrD-like helicase C-terminal domain KO461_RS05540 PF12462 DNA helicase IV / RNA helicase N terminal KO461_RS05565 PF01926 50S ribosome-binding GTPase KO461_RS05570 PF04393 Protein of unknown function (DUF535) KO461_RS05575 PF00588 SpoU rRNA Methylase family KO461_RS05585 PF03180 NLPA lipoprotein KO461_RS05590 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS05595 PF09383 NIL domain KO461_RS05595 PF00005 ABC transporter KO461_RS05655 PF01406 tRNA synthetases class I (C) catalytic domain KO461_RS05655 PF09190 DALR domain KO461_RS05660 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KO461_RS05675 PF01026 TatD related DNase KO461_RS05685 PF13597 Anaerobic ribonucleoside-triphosphate reductase KO461_RS05685 PF03477 ATP cone domain KO461_RS05695 PF00501 AMP-binding enzyme KO461_RS05700 PF02811 PHP domain KO461_RS05700 PF01336 OB-fold nucleic acid binding domain KO461_RS05700 PF14579 Helix-hairpin-helix motif KO461_RS05700 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KO461_RS05700 PF07733 Bacterial DNA polymerase III alpha NTPase domain KO461_RS05720 PF06628 Catalase-related immune-responsive KO461_RS05720 PF00199 Catalase KO461_RS05725 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KO461_RS05725 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KO461_RS05730 PF00206 Lyase KO461_RS05730 PF14698 Argininosuccinate lyase C-terminal KO461_RS05735 PF04488 Glycosyltransferase sugar-binding region containing DXD motif KO461_RS05755 PF00749 tRNA synthetases class I (E and Q), catalytic domain KO461_RS05765 PF00313 'Cold-shock' DNA-binding domain KO461_RS05770 PF00294 pfkB family carbohydrate kinase KO461_RS05775 PF13407 Periplasmic binding protein domain KO461_RS05780 PF02653 Branched-chain amino acid transport system / permease component KO461_RS05785 PF00005 ABC transporter KO461_RS05790 PF05025 RbsD / FucU transport protein family KO461_RS05795 PF00293 NUDIX domain KO461_RS05800 PF01925 Sulfite exporter TauE/SafE KO461_RS05805 PF01790 Prolipoprotein diacylglyceryl transferase KO461_RS05810 PF00303 Thymidylate synthase KO461_RS05815 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KO461_RS05845 PF04717 Type VI secretion system, phage-baseplate injector KO461_RS05850 PF10609 NUBPL iron-transfer P-loop NTPase KO461_RS05855 PF01588 Putative tRNA binding domain KO461_RS05855 PF09334 tRNA synthetases class I (M) KO461_RS05860 PF04384 Iron-sulphur cluster assembly KO461_RS05865 PF00111 2Fe-2S iron-sulfur cluster binding domain KO461_RS05870 PF00012 Hsp70 protein KO461_RS05875 PF07743 HSCB C-terminal oligomerisation domain KO461_RS05880 PF01521 Iron-sulphur cluster biosynthesis KO461_RS05885 PF01592 NifU-like N terminal domain KO461_RS05890 PF00266 Aminotransferase class-V KO461_RS05895 PF02082 Transcriptional regulator KO461_RS05900 PF00588 SpoU rRNA Methylase family KO461_RS05905 PF00459 Inositol monophosphatase family KO461_RS05955 PF01053 Cys/Met metabolism PLP-dependent enzyme KO461_RS05960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KO461_RS05960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KO461_RS05965 PF00085 Thioredoxin KO461_RS05970 PF01479 S4 domain KO461_RS05970 PF00849 RNA pseudouridylate synthase KO461_RS05975 PF10150 Ribonuclease E/G family KO461_RS05975 PF00575 S1 RNA binding domain KO461_RS05975 PF12111 Polyribonucleotide phosphorylase C terminal KO461_RS05985 PF07681 DoxX KO461_RS05990 PF11412 Disulphide bond corrector protein DsbC KO461_RS05990 PF02683 Cytochrome C biogenesis protein transmembrane region KO461_RS05990 PF00085 Thioredoxin KO461_RS05995 PF03641 Possible lysine decarboxylase KO461_RS06000 PF01197 Ribosomal protein L31 KO461_RS06010 PF00486 Transcriptional regulatory protein, C terminal KO461_RS06010 PF00072 Response regulator receiver domain KO461_RS06015 PF00005 ABC transporter KO461_RS06015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KO461_RS06020 PF00005 ABC transporter KO461_RS06020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KO461_RS06025 PF12911 N-terminal TM domain of oligopeptide transport permease C KO461_RS06025 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS06030 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS06035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KO461_RS06040 PF01668 SmpB protein KO461_RS06045 PF01926 50S ribosome-binding GTPase KO461_RS06045 PF01018 GTP1/OBG KO461_RS06050 PF00892 EamA-like transporter family KO461_RS06055 PF00892 EamA-like transporter family KO461_RS06060 PF01016 Ribosomal L27 protein KO461_RS06065 PF00829 Ribosomal prokaryotic L21 protein KO461_RS06070 PF00348 Polyprenyl synthetase KO461_RS06075 PF02677 Epoxyqueuosine reductase QueH KO461_RS06080 PF01494 FAD binding domain KO461_RS06085 PF00919 Uncharacterized protein family UPF0004 KO461_RS06085 PF01938 TRAM domain KO461_RS06085 PF04055 Radical SAM superfamily KO461_RS06095 PF13726 Na+-H+ antiporter family KO461_RS06095 PF03553 Na+/H+ antiporter family KO461_RS06100 PF00929 Exonuclease KO461_RS06105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KO461_RS06110 PF00593 TonB dependent receptor KO461_RS06110 PF07715 TonB-dependent Receptor Plug Domain KO461_RS06115 PF07690 Major Facilitator Superfamily KO461_RS06125 PF13649 Methyltransferase domain KO461_RS06130 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family KO461_RS06135 PF02938 GAD domain KO461_RS06135 PF00152 tRNA synthetases class II (D, K and N) KO461_RS06135 PF01336 OB-fold nucleic acid binding domain KO461_RS06140 PF13276 HTH-like domain KO461_RS06140 PF00665 Integrase core domain KO461_RS06140 PF13333 Integrase core domain KO461_RS06155 PF00293 NUDIX domain KO461_RS06160 PF01709 Transcriptional regulator KO461_RS06170 PF02075 Crossover junction endodeoxyribonuclease RuvC KO461_RS06175 PF01330 RuvA N terminal domain KO461_RS06175 PF07499 RuvA, C-terminal domain KO461_RS06180 PF17864 RuvB AAA lid domain KO461_RS06180 PF05491 RuvB C-terminal winged helix domain KO461_RS06180 PF05496 Holliday junction DNA helicase RuvB P-loop domain KO461_RS06185 PF17274 Family of unknown function (DUF5339) KO461_RS06190 PF01654 Cytochrome bd terminal oxidase subunit I KO461_RS06195 PF02322 Cytochrome bd terminal oxidase subunit II KO461_RS06210 PF03061 Thioesterase superfamily KO461_RS06215 PF01618 MotA/TolQ/ExbB proton channel family KO461_RS06220 PF02472 Biopolymer transport protein ExbD/TolR KO461_RS06225 PF06519 TolA C-terminal KO461_RS06230 PF04052 TolB amino-terminal domain KO461_RS06230 PF07676 WD40-like Beta Propeller Repeat KO461_RS06235 PF00691 OmpA family KO461_RS06255 PF07963 Prokaryotic N-terminal methylation motif KO461_RS06270 PF17344 Family of unknown function (DUF5374) KO461_RS06275 PF17946 RecC C-terminal domain KO461_RS06280 PF00583 Acetyltransferase (GNAT) family KO461_RS06285 PF03603 DNA polymerase III psi subunit KO461_RS06290 PF05175 Methyltransferase small domain KO461_RS06290 PF08468 Methyltransferase small domain N-terminal KO461_RS06305 PF00464 Serine hydroxymethyltransferase KO461_RS06315 PF02794 RTX toxin acyltransferase family KO461_RS06320 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) KO461_RS06320 PF02382 N-terminal domain in RTX protein KO461_RS06320 PF08339 RTX C-terminal domain KO461_RS06325 PF00664 ABC transporter transmembrane region KO461_RS06325 PF00005 ABC transporter KO461_RS06325 PF03412 Peptidase C39 family KO461_RS06335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KO461_RS06335 PF02378 Phosphotransferase system, EIIC KO461_RS06335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KO461_RS06340 PF01232 Mannitol dehydrogenase Rossmann domain KO461_RS06340 PF08125 Mannitol dehydrogenase C-terminal domain KO461_RS06345 PF05068 Mannitol repressor KO461_RS06350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KO461_RS06350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KO461_RS06355 PF01261 Xylose isomerase-like TIM barrel KO461_RS06360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KO461_RS06360 PF00205 Thiamine pyrophosphate enzyme, central domain KO461_RS06360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KO461_RS06365 PF00294 pfkB family carbohydrate kinase KO461_RS06390 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KO461_RS06395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KO461_RS06400 PF03611 PTS system sugar-specific permease component KO461_RS06410 PF00455 DeoR C terminal sensor domain KO461_RS06410 PF08220 DeoR-like helix-turn-helix domain KO461_RS06415 PF01261 Xylose isomerase-like TIM barrel KO461_RS06420 PF00596 Class II Aldolase and Adducin N-terminal domain KO461_RS06440 PF03222 Tryptophan/tyrosine permease family KO461_RS06445 PF02837 Glycosyl hydrolases family 2, sugar binding domain KO461_RS06445 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KO461_RS06445 PF00703 Glycosyl hydrolases family 2 KO461_RS06445 PF16353 Domain of unknown function(DUF4981) KO461_RS06445 PF02929 Beta galactosidase small chain KO461_RS06450 PF00462 Glutaredoxin KO461_RS06455 PF00881 Nitroreductase family KO461_RS06460 PF18030 RimK PreATP-grasp domain KO461_RS06460 PF08443 RimK-like ATP-grasp domain KO461_RS06475 PF16036 Chalcone isomerase-like KO461_RS06480 PF10415 Fumarase C C-terminus KO461_RS06480 PF00206 Lyase KO461_RS06485 PF04364 DNA polymerase III chi subunit, HolC KO461_RS06490 PF04266 ASCH domain KO461_RS06495 PF00133 tRNA synthetases class I (I, L, M and V) KO461_RS06495 PF10458 Valyl tRNA synthetase tRNA binding arm KO461_RS06495 PF08264 Anticodon-binding domain of tRNA KO461_RS06505 PF07804 HipA-like C-terminal domain KO461_RS06505 PF13657 HipA N-terminal domain KO461_RS06520 PF07690 Major Facilitator Superfamily KO461_RS06525 PF00529 HlyD membrane-fusion protein of T1SS KO461_RS06525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KO461_RS06530 PF00210 Ferritin-like domain KO461_RS06535 PF08206 Ribonuclease B OB domain KO461_RS06535 PF00773 RNB domain KO461_RS06535 PF00575 S1 RNA binding domain KO461_RS06545 PF01784 NIF3 (NGG1p interacting factor 3) KO461_RS06550 PF04055 Radical SAM superfamily KO461_RS06555 PF01242 6-pyruvoyl tetrahydropterin synthase KO461_RS06560 PF01867 CRISPR associated protein Cas1 KO461_RS06565 PF18019 HD domain KO461_RS06575 PF09615 CRISPR-associated protein (Cas_Csy3) KO461_RS06580 PF09614 CRISPR-associated protein (Cas_Csy2) KO461_RS06590 PF00171 Aldehyde dehydrogenase family KO461_RS06600 PF13407 Periplasmic binding protein domain KO461_RS06605 PF13407 Periplasmic binding protein domain KO461_RS06610 PF00005 ABC transporter KO461_RS06615 PF00005 ABC transporter KO461_RS06620 PF02653 Branched-chain amino acid transport system / permease component KO461_RS06625 PF00171 Aldehyde dehydrogenase family KO461_RS06625 PF00465 Iron-containing alcohol dehydrogenase KO461_RS06630 PF00593 TonB dependent receptor KO461_RS06630 PF07715 TonB-dependent Receptor Plug Domain KO461_RS06635 PF07549 SecD/SecF GG Motif KO461_RS06635 PF02355 Protein export membrane protein KO461_RS06640 PF07549 SecD/SecF GG Motif KO461_RS06640 PF13721 SecD export protein N-terminal TM region KO461_RS06640 PF02355 Protein export membrane protein KO461_RS06645 PF02699 Preprotein translocase subunit KO461_RS06650 PF01702 Queuine tRNA-ribosyltransferase KO461_RS06655 PF00155 Aminotransferase class I and II KO461_RS06660 PF02547 Queuosine biosynthesis protein KO461_RS06710 PF01136 Peptidase family U32 KO461_RS06710 PF16325 Peptidase family U32 C-terminal domain KO461_RS06725 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KO461_RS06745 PF00929 Exonuclease KO461_RS06750 PF00075 RNase H KO461_RS06755 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KO461_RS06765 PF00266 Aminotransferase class-V KO461_RS06770 PF04363 Protein of unknown function (DUF496) KO461_RS06775 PF02652 L-lactate permease KO461_RS06780 PF01070 FMN-dependent dehydrogenase KO461_RS06790 PF14572 Phosphoribosyl synthetase-associated domain KO461_RS06790 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KO461_RS06795 PF08544 GHMP kinases C terminal KO461_RS06795 PF00288 GHMP kinases N terminal domain KO461_RS06800 PF03550 Outer membrane lipoprotein LolB KO461_RS06805 PF01966 HD domain KO461_RS06805 PF01743 Poly A polymerase head domain KO461_RS06805 PF12627 Probable RNA and SrmB- binding site of polymerase A KO461_RS06810 PF08239 Bacterial SH3 domain KO461_RS06815 PF01384 Phosphate transporter family KO461_RS06820 PF01865 Protein of unknown function DUF47 KO461_RS06825 PF01928 CYTH domain KO461_RS06830 PF18073 Rubredoxin metal binding domain KO461_RS06835 PF05191 Adenylate kinase, active site lid KO461_RS06840 PF07690 Major Facilitator Superfamily KO461_RS06845 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA KO461_RS06850 PF01370 NAD dependent epimerase/dehydratase family KO461_RS06855 PF05656 Protein of unknown function (DUF805) KO461_RS06860 PF00860 Permease family KO461_RS06865 PF01171 PP-loop family KO461_RS06865 PF09179 TilS substrate binding domain KO461_RS06865 PF11734 TilS substrate C-terminal domain KO461_RS06870 PF08543 Phosphomethylpyrimidine kinase KO461_RS06875 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KO461_RS06880 PF00576 HIUase/Transthyretin family KO461_RS06890 PF00958 GMP synthase C terminal domain KO461_RS06890 PF02540 NAD synthase KO461_RS06890 PF00117 Glutamine amidotransferase class-I KO461_RS06895 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ KO461_RS06900 PF04221 RelB antitoxin KO461_RS06905 PF03606 C4-dicarboxylate anaerobic carrier KO461_RS06910 PF00665 Integrase core domain KO461_RS06910 PF13333 Integrase core domain KO461_RS06925 PF08534 Redoxin KO461_RS06930 PF02683 Cytochrome C biogenesis protein transmembrane region KO461_RS06935 PF01625 Peptide methionine sulfoxide reductase KO461_RS06935 PF01641 SelR domain KO461_RS06940 PF00484 Carbonic anhydrase KO461_RS06945 PF04972 BON domain KO461_RS06950 PF13580 SIS domain KO461_RS06955 PF02021 Uncharacterised protein family UPF0102 KO461_RS06960 PF04348 LppC putative lipoprotein KO461_RS06965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KO461_RS06970 PF01266 FAD dependent oxidoreductase KO461_RS06970 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KO461_RS06975 PF07992 Pyridine nucleotide-disulphide oxidoreductase KO461_RS06980 PF02525 Flavodoxin-like fold KO461_RS06985 PF01343 Peptidase family S49 KO461_RS06985 PF08496 Peptidase family S49 N-terminal KO461_RS06995 PF00043 Glutathione S-transferase, C-terminal domain KO461_RS06995 PF02798 Glutathione S-transferase, N-terminal domain KO461_RS07000 PF03989 DNA gyrase C-terminal domain, beta-propeller KO461_RS07000 PF00521 DNA gyrase/topoisomerase IV, subunit A KO461_RS07005 PF00204 DNA gyrase B KO461_RS07005 PF01751 Toprim domain KO461_RS07005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KO461_RS07005 PF00986 DNA gyrase B subunit, carboxyl terminus KO461_RS07010 PF03895 YadA-like membrane anchor domain KO461_RS07015 PF00005 ABC transporter KO461_RS07015 PF12848 ABC transporter KO461_RS07020 PF06226 Protein of unknown function (DUF1007) KO461_RS07025 PF03824 High-affinity nickel-transport protein KO461_RS07035 PF00271 Helicase conserved C-terminal domain KO461_RS07035 PF04851 Type III restriction enzyme, res subunit KO461_RS07035 PF02151 UvrB/uvrC motif KO461_RS07035 PF12344 Ultra-violet resistance protein B KO461_RS07035 PF17757 UvrB interaction domain KO461_RS07040 PF00691 OmpA family KO461_RS07040 PF01389 OmpA-like transmembrane domain KO461_RS07045 PF00595 PDZ domain KO461_RS07050 PF06295 Protein of unknown function (DUF1043) KO461_RS07055 PF18381 YcaO cyclodehydratase C-terminal domain KO461_RS07055 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding KO461_RS07060 PF01238 Phosphomannose isomerase type I KO461_RS07065 PF07411 Domain of unknown function (DUF1508) KO461_RS07070 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KO461_RS07070 PF00367 phosphotransferase system, EIIB KO461_RS07070 PF02378 Phosphotransferase system, EIIC KO461_RS07075 PF08241 Methyltransferase domain KO461_RS07080 PF16123 Hydroxyacylglutathione hydrolase C-terminus KO461_RS07080 PF00753 Metallo-beta-lactamase superfamily KO461_RS07085 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KO461_RS07085 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KO461_RS07085 PF01488 Shikimate / quinate 5-dehydrogenase KO461_RS07090 PF01047 MarR family KO461_RS07090 PF00480 ROK family KO461_RS07175 PF04717 Type VI secretion system, phage-baseplate injector KO461_RS07180 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KO461_RS07180 PF00367 phosphotransferase system, EIIB KO461_RS07180 PF02378 Phosphotransferase system, EIIC KO461_RS07185 PF01344 Kelch motif KO461_RS07190 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KO461_RS07190 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KO461_RS07195 PF03480 Bacterial extracellular solute-binding protein, family 7 KO461_RS07200 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase KO461_RS07205 PF00480 ROK family KO461_RS07210 PF01380 SIS domain KO461_RS07210 PF01418 Helix-turn-helix domain, rpiR family KO461_RS07215 PF00701 Dihydrodipicolinate synthetase family KO461_RS07220 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KO461_RS07225 PF01979 Amidohydrolase family KO461_RS07230 PF08534 Redoxin KO461_RS07235 PF00762 Ferrochelatase KO461_RS07240 PF03061 Thioesterase superfamily KO461_RS07245 PF02913 FAD linked oxidases, C-terminal domain KO461_RS07245 PF01565 FAD binding domain KO461_RS07245 PF13183 4Fe-4S dicluster domain KO461_RS07250 PF00691 OmpA family KO461_RS07250 PF01389 OmpA-like transmembrane domain KO461_RS07255 PF00462 Glutaredoxin KO461_RS07260 PF04284 Protein of unknown function (DUF441) KO461_RS07265 PF04241 Protein of unknown function (DUF423) KO461_RS07270 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KO461_RS07270 PF11898 Domain of unknown function (DUF3418) KO461_RS07270 PF04408 Helicase associated domain (HA2) KO461_RS07270 PF00271 Helicase conserved C-terminal domain KO461_RS07270 PF00270 DEAD/DEAH box helicase KO461_RS07280 PF13419 Haloacid dehalogenase-like hydrolase KO461_RS07290 PF00578 AhpC/TSA family KO461_RS07295 PF00005 ABC transporter KO461_RS07295 PF02687 FtsX-like permease family KO461_RS07295 PF12704 MacB-like periplasmic core domain KO461_RS07305 PF00005 ABC transporter KO461_RS07305 PF02687 FtsX-like permease family KO461_RS07305 PF12704 MacB-like periplasmic core domain KO461_RS07315 PF10634 Fe2+ transport protein KO461_RS07320 PF03239 Iron permease FTR1 family KO461_RS07325 PF00905 Penicillin binding protein transpeptidase domain KO461_RS07325 PF14814 Bifunctional transglycosylase second domain KO461_RS07325 PF00912 Transglycosylase KO461_RS07335 PF01521 Iron-sulphur cluster biosynthesis KO461_RS07340 PF00557 Metallopeptidase family M24 KO461_RS07345 PF08335 GlnD PII-uridylyltransferase KO461_RS07345 PF01966 HD domain KO461_RS07350 PF00202 Aminotransferase class-III KO461_RS07355 PF00953 Glycosyl transferase family 4 KO461_RS07400 PF00005 ABC transporter KO461_RS07405 PF00005 ABC transporter KO461_RS07405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KO461_RS07410 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS07410 PF12911 N-terminal TM domain of oligopeptide transport permease C KO461_RS07415 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS07420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KO461_RS07425 PF04317 YcjX-like family, DUF463 KO461_RS07430 PF05128 Domain of unknown function (DUF697) KO461_RS07435 PF18024 Helix-turn-helix domain KO461_RS07435 PF00158 Sigma-54 interaction domain KO461_RS07440 PF17209 Hfq protein KO461_RS07450 PF01119 DNA mismatch repair protein, C-terminal domain KO461_RS07450 PF08676 MutL C terminal dimerisation domain KO461_RS07455 PF01520 N-acetylmuramoyl-L-alanine amidase KO461_RS07455 PF01476 LysM domain KO461_RS07460 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KO461_RS07470 PF04138 GtrA-like protein KO461_RS07475 PF00535 Glycosyl transferase family 2 KO461_RS07480 PF17284 Spermidine synthase tetramerisation domain KO461_RS07490 PF00884 Sulfatase KO461_RS07495 PF00589 Phage integrase family KO461_RS07495 PF02899 Phage integrase, N-terminal SAM-like domain KO461_RS07525 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KO461_RS07535 PF03498 Cytolethal distending toxin A/C domain KO461_RS07540 PF03372 Endonuclease/Exonuclease/phosphatase family KO461_RS07600 PF00929 Exonuclease KO461_RS07605 PF03193 RsgA GTPase KO461_RS07610 PF00381 PTS HPr component phosphorylation site KO461_RS07615 PF02896 PEP-utilising enzyme, TIM barrel domain KO461_RS07615 PF00391 PEP-utilising enzyme, mobile domain KO461_RS07615 PF05524 PEP-utilising enzyme, N-terminal KO461_RS07620 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KO461_RS07625 PF01432 Peptidase family M3 KO461_RS07630 PF04304 Protein of unknown function (DUF454) KO461_RS07635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KO461_RS07655 PF04717 Type VI secretion system, phage-baseplate injector KO461_RS07660 PF01063 Amino-transferase class IV KO461_RS07665 PF00425 chorismate binding enzyme KO461_RS07670 PF00117 Glutamine amidotransferase class-I KO461_RS07675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KO461_RS07675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KO461_RS07680 PF00893 Small Multidrug Resistance protein KO461_RS07685 PF03881 Fructosamine kinase KO461_RS07690 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KO461_RS07690 PF03129 Anticodon binding domain KO461_RS07690 PF02824 TGS domain KO461_RS07690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KO461_RS07695 PF13276 HTH-like domain KO461_RS07695 PF13333 Integrase core domain KO461_RS07695 PF00665 Integrase core domain KO461_RS07710 PF00717 Peptidase S24-like KO461_RS07720 PF00478 IMP dehydrogenase / GMP reductase domain KO461_RS07720 PF00571 CBS domain KO461_RS07725 PF03099 Biotin/lipoate A/B protein ligase family KO461_RS07725 PF02237 Biotin protein ligase C terminal domain KO461_RS07770 PF00665 Integrase core domain KO461_RS07785 PF17384 RimP C-terminal SH3 domain KO461_RS07785 PF02576 RimP N-terminal domain KO461_RS07790 PF13184 NusA-like KH domain KO461_RS07790 PF08529 NusA N-terminal domain KO461_RS07790 PF00575 S1 RNA binding domain KO461_RS07795 PF00009 Elongation factor Tu GTP binding domain KO461_RS07795 PF11987 Translation-initiation factor 2 KO461_RS07795 PF08364 Bacterial translation initiation factor IF-2 associated region KO461_RS07795 PF04760 Translation initiation factor IF-2, N-terminal region KO461_RS07805 PF02033 Ribosome-binding factor A KO461_RS07810 PF16198 tRNA pseudouridylate synthase B C-terminal domain KO461_RS07810 PF01509 TruB family pseudouridylate synthase (N terminal domain) KO461_RS07810 PF09157 Pseudouridine synthase II TruB, C-terminal KO461_RS07820 PF00579 tRNA synthetases class I (W and Y) KO461_RS07820 PF01479 S4 domain KO461_RS07825 PF17746 SfsA N-terminal OB domain KO461_RS07825 PF03749 Sugar fermentation stimulation protein RE domain KO461_RS07830 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KO461_RS07830 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KO461_RS07830 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KO461_RS07835 PF02233 NAD(P) transhydrogenase beta subunit KO461_RS07845 PF02661 Fic/DOC family KO461_RS07845 PF12728 Helix-turn-helix domain KO461_RS07850 PF00586 AIR synthase related protein, N-terminal domain KO461_RS07850 PF02769 AIR synthase related protein, C-terminal domain KO461_RS07855 PF00005 ABC transporter KO461_RS07855 PF08402 TOBE domain KO461_RS07860 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS07865 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS07875 PF01541 GIY-YIG catalytic domain KO461_RS07875 PF02151 UvrB/uvrC motif KO461_RS07875 PF08459 UvrC Helix-hairpin-helix N-terminal KO461_RS07880 PF02348 Cytidylyltransferase KO461_RS07885 PF03966 Trm112p-like protein KO461_RS07890 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KO461_RS07895 PF00664 ABC transporter transmembrane region KO461_RS07895 PF00005 ABC transporter KO461_RS07900 PF03772 Competence protein KO461_RS07900 PF00753 Metallo-beta-lactamase superfamily KO461_RS07900 PF13567 Domain of unknown function (DUF4131) KO461_RS07905 PF01258 Prokaryotic dksA/traR C4-type zinc finger KO461_RS07910 PF01743 Poly A polymerase head domain KO461_RS07910 PF12626 Polymerase A arginine-rich C-terminus KO461_RS07910 PF12627 Probable RNA and SrmB- binding site of polymerase A KO461_RS07915 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KO461_RS07925 PF07085 DRTGG domain KO461_RS07925 PF01515 Phosphate acetyl/butaryl transferase KO461_RS07930 PF00871 Acetokinase family KO461_RS07935 PF04217 Protein of unknown function, DUF412 KO461_RS07940 PF02674 Colicin V production protein KO461_RS07945 PF02446 4-alpha-glucanotransferase KO461_RS07950 PF00343 Carbohydrate phosphorylase KO461_RS07955 PF17874 MalT-like TPR region KO461_RS07955 PF00196 Bacterial regulatory proteins, luxR family KO461_RS07960 PF03848 Tellurite resistance protein TehB KO461_RS07960 PF09313 Domain of unknown function (DUF1971) KO461_RS07965 PF00456 Transketolase, thiamine diphosphate binding domain KO461_RS07965 PF17831 Pyruvate dehydrogenase E1 component middle domain KO461_RS07970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KO461_RS07970 PF00364 Biotin-requiring enzyme KO461_RS07970 PF02817 e3 binding domain KO461_RS07975 PF07992 Pyridine nucleotide-disulphide oxidoreductase KO461_RS07975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KO461_RS07980 PF00881 Nitroreductase family KO461_RS07985 PF01343 Peptidase family S49 KO461_RS07995 PF01300 Telomere recombination KO461_RS08000 PF00849 RNA pseudouridylate synthase KO461_RS08000 PF01479 S4 domain KO461_RS08005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KO461_RS08005 PF03466 LysR substrate binding domain KO461_RS08010 PF00132 Bacterial transferase hexapeptide (six repeats) KO461_RS08010 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KO461_RS08010 PF14602 Hexapeptide repeat of succinyl-transferase KO461_RS08015 PF04269 Protein of unknown function, DUF440 KO461_RS08020 PF00356 Bacterial regulatory proteins, lacI family KO461_RS08025 PF00561 alpha/beta hydrolase fold KO461_RS08030 PF02698 DUF218 domain KO461_RS08035 PF00356 Bacterial regulatory proteins, lacI family KO461_RS08035 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KO461_RS08040 PF04717 Type VI secretion system, phage-baseplate injector KO461_RS08060 PF04962 KduI/IolB family KO461_RS08065 PF00459 Inositol monophosphatase family KO461_RS08070 PF07690 Major Facilitator Superfamily KO461_RS08080 PF13333 Integrase core domain KO461_RS08080 PF00665 Integrase core domain KO461_RS08080 PF13276 HTH-like domain KO461_RS08095 PF01336 OB-fold nucleic acid binding domain KO461_RS08095 PF00152 tRNA synthetases class II (D, K and N) KO461_RS08105 PF13098 Thioredoxin-like domain KO461_RS08105 PF10411 Disulfide bond isomerase protein N-terminus KO461_RS08110 PF17768 RecJ OB domain KO461_RS08110 PF02272 DHHA1 domain KO461_RS08110 PF01368 DHH family KO461_RS08120 PF01048 Phosphorylase superfamily KO461_RS08125 PF10670 Domain of unknown function (DUF4198) KO461_RS08135 PF01891 Cobalt uptake substrate-specific transmembrane region KO461_RS08145 PF00005 ABC transporter KO461_RS08150 PF02492 CobW/HypB/UreG, nucleotide-binding domain KO461_RS08155 PF01924 Hydrogenase formation hypA family KO461_RS08160 PF02769 AIR synthase related protein, C-terminal domain KO461_RS08160 PF00586 AIR synthase related protein, N-terminal domain KO461_RS08180 PF08501 Shikimate dehydrogenase substrate binding domain KO461_RS08185 PF02219 Methylenetetrahydrofolate reductase KO461_RS08190 PF03739 Lipopolysaccharide export system permease LptF/LptG KO461_RS08195 PF03739 Lipopolysaccharide export system permease LptF/LptG KO461_RS08200 PF00883 Cytosol aminopeptidase family, catalytic domain KO461_RS08200 PF02789 Cytosol aminopeptidase family, N-terminal domain KO461_RS08205 PF03459 TOBE domain KO461_RS08205 PF00005 ABC transporter KO461_RS08210 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS08220 PF03459 TOBE domain KO461_RS08220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KO461_RS08225 PF00939 Sodium:sulfate symporter transmembrane region KO461_RS08235 PF13180 PDZ domain KO461_RS08240 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KO461_RS08240 PF01872 RibD C-terminal domain KO461_RS08245 PF03477 ATP cone domain KO461_RS08250 PF01728 FtsJ-like methyltransferase KO461_RS08250 PF18125 RlmM ferredoxin-like domain KO461_RS08255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KO461_RS08255 PF03466 LysR substrate binding domain KO461_RS08260 PF01063 Amino-transferase class IV KO461_RS08270 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KO461_RS08270 PF00056 lactate/malate dehydrogenase, NAD binding domain KO461_RS08275 PF02863 Arginine repressor, C-terminal domain KO461_RS08275 PF01316 Arginine repressor, DNA binding domain KO461_RS08280 PF08338 Domain of unknown function (DUF1731) KO461_RS08280 PF01370 NAD dependent epimerase/dehydratase family KO461_RS08285 PF02508 Rnf-Nqr subunit, membrane protein KO461_RS08290 PF04060 Putative Fe-S cluster KO461_RS08295 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KO461_RS08295 PF12838 4Fe-4S dicluster domain KO461_RS08295 PF13375 RnfC Barrel sandwich hybrid domain KO461_RS08300 PF03116 NQR2, RnfD, RnfE family KO461_RS08305 PF04205 FMN-binding domain KO461_RS08310 PF02508 Rnf-Nqr subunit, membrane protein KO461_RS08315 PF00730 HhH-GPD superfamily base excision DNA repair protein KO461_RS08315 PF00633 Helix-hairpin-helix motif KO461_RS08315 PF10576 Iron-sulfur binding domain of endonuclease III KO461_RS08320 PF00209 Sodium:neurotransmitter symporter family KO461_RS08325 PF00950 ABC 3 transport family KO461_RS08330 PF00005 ABC transporter KO461_RS08340 PF01551 Peptidase family M23 KO461_RS08340 PF04225 Opacity-associated protein A LysM-like domain KO461_RS08345 PF00005 ABC transporter KO461_RS08350 PF01032 FecCD transport family KO461_RS08355 PF01032 FecCD transport family KO461_RS08360 PF01497 Periplasmic binding protein KO461_RS08365 PF00149 Calcineurin-like phosphoesterase KO461_RS08365 PF02872 5'-nucleotidase, C-terminal domain KO461_RS08370 PF04216 Protein involved in formate dehydrogenase formation KO461_RS08385 PF00512 His Kinase A (phospho-acceptor) domain KO461_RS08385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KO461_RS08385 PF08521 Two-component sensor kinase N-terminal KO461_RS08395 PF10688 Bacterial inner membrane protein KO461_RS08400 PF00764 Arginosuccinate synthase KO461_RS08405 PF01370 NAD dependent epimerase/dehydratase family KO461_RS08410 PF03144 Elongation factor Tu domain 2 KO461_RS08410 PF16658 Class II release factor RF3, C-terminal domain KO461_RS08410 PF00009 Elongation factor Tu GTP binding domain KO461_RS08415 PF05973 Phage derived protein Gp49-like (DUF891) KO461_RS08425 PF03710 Glutamate-ammonia ligase adenylyltransferase KO461_RS08425 PF08335 GlnD PII-uridylyltransferase KO461_RS08465 PF01717 Cobalamin-independent synthase, Catalytic domain KO461_RS08465 PF08267 Cobalamin-independent synthase, N-terminal domain KO461_RS08470 PF03466 LysR substrate binding domain KO461_RS08470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KO461_RS08475 PF03591 AzlC protein KO461_RS08480 PF05437 Branched-chain amino acid transport protein (AzlD) KO461_RS08485 PF05193 Peptidase M16 inactive domain KO461_RS08485 PF00675 Insulinase (Peptidase family M16) KO461_RS08490 PF07715 TonB-dependent Receptor Plug Domain KO461_RS08495 PF04393 Protein of unknown function (DUF535) KO461_RS08500 PF02224 Cytidylate kinase KO461_RS08505 PF00575 S1 RNA binding domain KO461_RS08510 PF00216 Bacterial DNA-binding protein KO461_RS08515 PF06305 Lipopolysaccharide assembly protein A domain KO461_RS08520 PF18073 Rubredoxin metal binding domain KO461_RS08525 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KO461_RS08530 PF01253 Translation initiation factor SUI1 KO461_RS08535 PF04247 Invasion gene expression up-regulator, SirB KO461_RS08540 PF00521 DNA gyrase/topoisomerase IV, subunit A KO461_RS08540 PF03989 DNA gyrase C-terminal domain, beta-propeller KO461_RS08545 PF01475 Ferric uptake regulator family KO461_RS08550 PF00258 Flavodoxin KO461_RS08560 PF00561 alpha/beta hydrolase fold KO461_RS08565 PF17206 SeqA protein N-terminal domain KO461_RS08565 PF03925 SeqA protein C-terminal domain KO461_RS08570 PF00501 AMP-binding enzyme KO461_RS08575 PF12794 Mechanosensitive ion channel inner membrane domain 1 KO461_RS08575 PF12795 Mechanosensitive ion channel porin domain KO461_RS08575 PF00924 Mechanosensitive ion channel KO461_RS08580 PF01264 Chorismate synthase KO461_RS08585 PF03411 Penicillin-insensitive murein endopeptidase KO461_RS08590 PF01925 Sulfite exporter TauE/SafE KO461_RS08595 PF03279 Bacterial lipid A biosynthesis acyltransferase KO461_RS08600 PF00156 Phosphoribosyl transferase domain KO461_RS08605 PF12170 DNA polymerase III tau subunit V interacting with alpha KO461_RS08605 PF12169 DNA polymerase III subunits gamma and tau domain III KO461_RS08610 PF03372 Endonuclease/Exonuclease/phosphatase family KO461_RS08615 PF00535 Glycosyl transferase family 2 KO461_RS08625 PF01042 Endoribonuclease L-PSP KO461_RS08630 PF14256 YwiC-like protein KO461_RS08635 PF08238 Sel1 repeat KO461_RS08640 PF03553 Na+/H+ antiporter family KO461_RS08645 PF00816 H-NS histone family KO461_RS08650 PF00551 Formyl transferase KO461_RS08650 PF01842 ACT domain KO461_RS08655 PF01728 FtsJ-like methyltransferase KO461_RS08660 PF01434 Peptidase family M41 KO461_RS08660 PF00004 ATPase family associated with various cellular activities (AAA) KO461_RS08660 PF17862 AAA+ lid domain KO461_RS08660 PF06480 FtsH Extracellular KO461_RS08665 PF04315 Elongation factor P hydroxylase KO461_RS08670 PF00005 ABC transporter KO461_RS08670 PF08402 TOBE domain KO461_RS08675 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS08680 PF00005 ABC transporter KO461_RS08680 PF08402 TOBE domain KO461_RS08700 PF00672 HAMP domain KO461_RS08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KO461_RS08700 PF00512 His Kinase A (phospho-acceptor) domain KO461_RS08705 PF00072 Response regulator receiver domain KO461_RS08705 PF14532 Sigma-54 interaction domain KO461_RS08705 PF02954 Bacterial regulatory protein, Fis family KO461_RS08710 PF14489 QueF-like protein KO461_RS08710 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KO461_RS08715 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) KO461_RS08720 PF04287 tRNA pseudouridine synthase C KO461_RS08725 PF00849 RNA pseudouridylate synthase KO461_RS08730 PF03701 Uncharacterised protein family (UPF0181) KO461_RS08735 PF00313 'Cold-shock' DNA-binding domain KO461_RS08740 PF17414 MatP C-terminal ribbon-helix-helix domain KO461_RS08740 PF06303 MatP N-terminal domain KO461_RS08745 PF05362 Lon protease (S16) C-terminal proteolytic domain KO461_RS08745 PF13654 AAA domain KO461_RS08750 PF07977 FabA-like domain KO461_RS08760 PF02635 DsrE/DsrF-like family KO461_RS08765 PF12705 PD-(D/E)XK nuclease superfamily KO461_RS08765 PF00580 UvrD/REP helicase N-terminal domain KO461_RS08765 PF13361 UvrD-like helicase C-terminal domain KO461_RS08770 PF13538 UvrD-like helicase C-terminal domain KO461_RS08780 PF00572 Ribosomal protein L13 KO461_RS08785 PF00380 Ribosomal protein S9/S16 KO461_RS08790 PF01416 tRNA pseudouridine synthase KO461_RS08805 PF00939 Sodium:sulfate symporter transmembrane region KO461_RS08810 PF04237 YjbR KO461_RS08815 PF00384 Molybdopterin oxidoreductase KO461_RS08815 PF18364 Molybdopterin oxidoreductase N-terminal domain KO461_RS08815 PF01568 Molydopterin dinucleotide binding domain KO461_RS08820 PF03264 NapC/NirT cytochrome c family, N-terminal region KO461_RS08825 PF02926 THUMP domain KO461_RS08825 PF02568 Thiamine biosynthesis protein (ThiI) KO461_RS08830 PF03575 Peptidase family S51 KO461_RS08840 PF13340 Putative transposase of IS4/5 family (DUF4096) KO461_RS08860 PF00589 Phage integrase family KO461_RS08870 PF03788 LrgA family KO461_RS08875 PF04172 LrgB-like family KO461_RS08880 PF13286 Phosphohydrolase-associated domain KO461_RS08880 PF01966 HD domain KO461_RS08890 PF05973 Phage derived protein Gp49-like (DUF891) KO461_RS08895 PF12848 ABC transporter KO461_RS08895 PF16326 ABC transporter C-terminal domain KO461_RS08895 PF00005 ABC transporter KO461_RS08930 PF00182 Chitinase class I KO461_RS08945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KO461_RS08945 PF02806 Alpha amylase, C-terminal all-beta domain KO461_RS08945 PF00128 Alpha amylase, catalytic domain KO461_RS08950 PF00128 Alpha amylase, catalytic domain KO461_RS08950 PF18390 Glycogen debranching enzyme C-terminal domain KO461_RS08950 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KO461_RS08955 PF00483 Nucleotidyl transferase KO461_RS08960 PF08323 Starch synthase catalytic domain KO461_RS08960 PF00534 Glycosyl transferases group 1 KO461_RS08965 PF00343 Carbohydrate phosphorylase KO461_RS08970 PF09335 SNARE associated Golgi protein KO461_RS08975 PF01386 Ribosomal L25p family KO461_RS08985 PF00768 D-alanyl-D-alanine carboxypeptidase KO461_RS08990 PF17192 MukF middle domain KO461_RS08990 PF17193 MukF C-terminal domain KO461_RS08990 PF03882 MukF winged-helix domain KO461_RS09000 PF13193 AMP-binding enzyme C-terminal domain KO461_RS09000 PF00501 AMP-binding enzyme KO461_RS09000 PF01553 Acyltransferase KO461_RS09005 PF04288 MukE-like family KO461_RS09010 PF04310 MukB N-terminal KO461_RS09010 PF16330 MukB hinge domain KO461_RS09020 PF08411 Exonuclease C-terminal KO461_RS09020 PF00929 Exonuclease KO461_RS09025 PF00210 Ferritin-like domain KO461_RS09030 PF00210 Ferritin-like domain KO461_RS09040 PF13545 Crp-like helix-turn-helix domain KO461_RS09040 PF00027 Cyclic nucleotide-binding domain KO461_RS09045 PF00582 Universal stress protein family KO461_RS09050 PF10670 Domain of unknown function (DUF4198) KO461_RS09055 PF01396 Topoisomerase DNA binding C4 zinc finger KO461_RS09055 PF01751 Toprim domain KO461_RS09055 PF01131 DNA topoisomerase KO461_RS09055 PF08272 Topoisomerase I zinc-ribbon-like KO461_RS09060 PF02811 PHP domain KO461_RS09065 PF01180 Dihydroorotate dehydrogenase KO461_RS09070 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KO461_RS09070 PF01433 Peptidase family M1 domain KO461_RS09070 PF11940 Domain of unknown function (DUF3458) Ig-like fold KO461_RS09075 PF00155 Aminotransferase class I and II KO461_RS09085 PF13533 Biotin-lipoyl like KO461_RS09090 PF00005 ABC transporter KO461_RS09100 PF08139 Prokaryotic membrane lipoprotein lipid attachment site KO461_RS09100 PF02321 Outer membrane efflux protein KO461_RS09110 PF00877 NlpC/P60 family KO461_RS09115 PF00216 Bacterial DNA-binding protein KO461_RS09120 PF03484 tRNA synthetase B5 domain KO461_RS09120 PF03147 Ferredoxin-fold anticodon binding domain KO461_RS09120 PF01588 Putative tRNA binding domain KO461_RS09120 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KO461_RS09120 PF03483 B3/4 domain KO461_RS09125 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KO461_RS09125 PF01409 tRNA synthetases class II core domain (F) KO461_RS09130 PF01435 Peptidase family M48 KO461_RS09140 PF01380 SIS domain KO461_RS09140 PF00571 CBS domain KO461_RS09150 PF00425 chorismate binding enzyme KO461_RS09150 PF04715 Anthranilate synthase component I, N terminal region KO461_RS09160 PF14552 Tautomerase enzyme KO461_RS09175 PF01381 Helix-turn-helix KO461_RS09180 PF00218 Indole-3-glycerol phosphate synthase KO461_RS09180 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KO461_RS09190 PF01455 HupF/HypC family KO461_RS09205 PF04277 Oxaloacetate decarboxylase, gamma chain KO461_RS09210 PF02436 Conserved carboxylase domain KO461_RS09210 PF00682 HMGL-like KO461_RS09210 PF00364 Biotin-requiring enzyme KO461_RS09215 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit KO461_RS09235 PF00291 Pyridoxal-phosphate dependent enzyme KO461_RS09240 PF00290 Tryptophan synthase alpha chain KO461_RS09245 PF00317 Ribonucleotide reductase, all-alpha domain KO461_RS09245 PF02867 Ribonucleotide reductase, barrel domain KO461_RS09245 PF03477 ATP cone domain KO461_RS09255 PF02887 Pyruvate kinase, alpha/beta domain KO461_RS09255 PF00224 Pyruvate kinase, barrel domain KO461_RS09260 PF03992 Antibiotic biosynthesis monooxygenase KO461_RS09265 PF01791 DeoC/LacD family aldolase KO461_RS09270 PF13407 Periplasmic binding protein domain KO461_RS09275 PF02653 Branched-chain amino acid transport system / permease component KO461_RS09280 PF02653 Branched-chain amino acid transport system / permease component KO461_RS09285 PF00005 ABC transporter KO461_RS09290 PF04198 Putative sugar-binding domain KO461_RS09290 PF00325 Bacterial regulatory proteins, crp family KO461_RS09295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KO461_RS09295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KO461_RS09305 PF00480 ROK family KO461_RS09310 PF01336 OB-fold nucleic acid binding domain KO461_RS09310 PF00152 tRNA synthetases class II (D, K and N) KO461_RS09315 PF04386 Stringent starvation protein B KO461_RS09320 PF13417 Glutathione S-transferase, N-terminal domain KO461_RS09320 PF00043 Glutathione S-transferase, C-terminal domain KO461_RS09325 PF02391 MoaE protein KO461_RS09330 PF02597 ThiS family KO461_RS09335 PF01967 MoaC family KO461_RS09340 PF04055 Radical SAM superfamily KO461_RS09340 PF06463 Molybdenum Cofactor Synthesis C KO461_RS09345 PF01933 Uncharacterised protein family UPF0052 KO461_RS09410 PF01555 DNA methylase KO461_RS09420 PF13340 Putative transposase of IS4/5 family (DUF4096) KO461_RS09435 PF01032 FecCD transport family KO461_RS09440 PF00005 ABC transporter KO461_RS09450 PF03459 TOBE domain KO461_RS09455 PF00593 TonB dependent receptor KO461_RS09455 PF07715 TonB-dependent Receptor Plug Domain KO461_RS09460 PF00005 ABC transporter KO461_RS09465 PF01032 FecCD transport family KO461_RS09470 PF01497 Periplasmic binding protein KO461_RS09480 PF00593 TonB dependent receptor KO461_RS09490 PF01171 PP-loop family KO461_RS09495 PF00565 Staphylococcal nuclease homologue KO461_RS09500 PF00266 Aminotransferase class-V KO461_RS09505 PF02657 Fe-S metabolism associated domain KO461_RS09510 PF00294 pfkB family carbohydrate kinase KO461_RS09510 PF01467 Cytidylyltransferase-like KO461_RS09515 PF03279 Bacterial lipid A biosynthesis acyltransferase KO461_RS09525 PF02525 Flavodoxin-like fold KO461_RS09535 PF16200 C-terminal region of band_7 KO461_RS09535 PF01145 SPFH domain / Band 7 family KO461_RS09545 PF03625 Domain of unknown function DUF302 KO461_RS09545 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KO461_RS09560 PF00034 Cytochrome c KO461_RS09560 PF03150 Di-haem cytochrome c peroxidase KO461_RS09560 PF14376 Haem-binding domain KO461_RS09565 PF01612 3'-5' exonuclease KO461_RS09565 PF00570 HRDC domain KO461_RS09575 PF03843 Outer membrane lipoprotein Slp family KO461_RS09580 PF00814 Glycoprotease family KO461_RS09585 PF06733 DEAD_2 KO461_RS09585 PF13307 Helicase C-terminal domain KO461_RS09590 PF01263 Aldose 1-epimerase KO461_RS09595 PF07148 Maltose operon periplasmic protein precursor (MalM) KO461_RS09600 PF02264 LamB porin KO461_RS09605 PF00005 ABC transporter KO461_RS09605 PF17912 MalK OB fold domain KO461_RS09610 PF01547 Bacterial extracellular solute-binding protein KO461_RS09615 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS09615 PF14785 Maltose transport system permease protein MalF P2 domain KO461_RS09620 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS09625 PF00128 Alpha amylase, catalytic domain KO461_RS09630 PF08402 TOBE domain KO461_RS09630 PF00005 ABC transporter KO461_RS09635 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS09645 PF18766 SWI2/SNF2 ATPase KO461_RS09645 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KO461_RS09645 PF12008 Type I restriction and modification enzyme - subunit R C terminal KO461_RS09650 PF02867 Ribonucleotide reductase, barrel domain KO461_RS09650 PF03477 ATP cone domain KO461_RS09650 PF00317 Ribonucleotide reductase, all-alpha domain KO461_RS09660 PF00268 Ribonucleotide reductase, small chain KO461_RS09665 PF00111 2Fe-2S iron-sulfur cluster binding domain KO461_RS09670 PF05173 Dihydrodipicolinate reductase, C-terminus KO461_RS09670 PF01113 Dihydrodipicolinate reductase, N-terminus KO461_RS09675 PF01810 LysE type translocator KO461_RS09680 PF04608 Phosphatidylglycerophosphatase A KO461_RS09685 PF02769 AIR synthase related protein, C-terminal domain KO461_RS09685 PF00586 AIR synthase related protein, N-terminal domain KO461_RS09690 PF01029 NusB family KO461_RS09695 PF00885 6,7-dimethyl-8-ribityllumazine synthase KO461_RS09705 PF00342 Phosphoglucose isomerase KO461_RS09710 PF00842 Alanine racemase, C-terminal domain KO461_RS09710 PF01168 Alanine racemase, N-terminal domain KO461_RS09715 PF03796 DnaB-like helicase C terminal domain KO461_RS09715 PF00772 DnaB-like helicase N terminal domain KO461_RS09720 PF00793 DAHP synthetase I family KO461_RS09725 PF12704 MacB-like periplasmic core domain KO461_RS09725 PF02687 FtsX-like permease family KO461_RS09730 PF00005 ABC transporter KO461_RS09735 PF12704 MacB-like periplasmic core domain KO461_RS09735 PF02687 FtsX-like permease family KO461_RS09760 PF03692 Putative zinc- or iron-chelating domain KO461_RS09775 PF00749 tRNA synthetases class I (E and Q), catalytic domain KO461_RS09775 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KO461_RS09780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KO461_RS09785 PF00005 ABC transporter KO461_RS09785 PF12704 MacB-like periplasmic core domain KO461_RS09785 PF02687 FtsX-like permease family KO461_RS09790 PF02321 Outer membrane efflux protein KO461_RS09800 PF08274 PhnA Zinc-Ribbon KO461_RS09800 PF03831 PhnA domain KO461_RS09810 PF00849 RNA pseudouridylate synthase KO461_RS09815 PF03956 Lysine exporter LysO KO461_RS09820 PF13396 Phospholipase_D-nuclease N-terminal KO461_RS09820 PF13091 PLD-like domain KO461_RS09825 PF00300 Histidine phosphatase superfamily (branch 1) KO461_RS09830 PF08245 Mur ligase middle domain KO461_RS09835 PF17848 Acetyl-coA carboxylase zinc finger domain KO461_RS09835 PF01039 Carboxyl transferase domain KO461_RS09840 PF02609 Exonuclease VII small subunit KO461_RS09845 PF00348 Polyprenyl synthetase KO461_RS09850 PF02780 Transketolase, C-terminal domain KO461_RS09850 PF02779 Transketolase, pyrimidine binding domain KO461_RS09850 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KO461_RS09855 PF08220 DeoR-like helix-turn-helix domain KO461_RS09855 PF00455 DeoR C terminal sensor domain KO461_RS09860 PF00107 Zinc-binding dehydrogenase KO461_RS09860 PF08240 Alcohol dehydrogenase GroES-like domain KO461_RS09865 PF03611 PTS system sugar-specific permease component KO461_RS09875 PF01791 DeoC/LacD family aldolase KO461_RS09885 PF00453 Ribosomal protein L20 KO461_RS09890 PF01632 Ribosomal protein L35 KO461_RS09895 PF05198 Translation initiation factor IF-3, N-terminal domain KO461_RS09895 PF00707 Translation initiation factor IF-3, C-terminal domain KO461_RS09900 PF00970 Oxidoreductase FAD-binding domain KO461_RS09900 PF00175 Oxidoreductase NAD-binding domain KO461_RS09910 PF13333 Integrase core domain KO461_RS09910 PF00665 Integrase core domain KO461_RS09910 PF13276 HTH-like domain KO461_RS09915 PF00817 impB/mucB/samB family KO461_RS09915 PF11798 IMS family HHH motif KO461_RS09920 PF00809 Pterin binding enzyme KO461_RS09925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KO461_RS09925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KO461_RS09925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KO461_RS09925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KO461_RS09930 PF00300 Histidine phosphatase superfamily (branch 1) KO461_RS09940 PF05209 Septum formation inhibitor MinC, N-terminal domain KO461_RS09940 PF03775 Septum formation inhibitor MinC, C-terminal domain KO461_RS09945 PF05166 YcgL domain KO461_RS09955 PF00877 NlpC/P60 family KO461_RS09960 PF00793 DAHP synthetase I family KO461_RS09965 PF13847 Methyltransferase domain KO461_RS09965 PF17827 PrmC N-terminal domain KO461_RS09970 PF03462 PCRF domain KO461_RS09970 PF00472 RF-1 domain KO461_RS09975 PF05433 Glycine zipper 2TM domain KO461_RS09985 PF00750 tRNA synthetases class I (R) KO461_RS09985 PF05746 DALR anticodon binding domain KO461_RS09985 PF03485 Arginyl tRNA synthetase N terminal domain KO461_RS09995 PF04073 Aminoacyl-tRNA editing domain KO461_RS10000 PF01554 MatE KO461_RS10005 PF00677 Lumazine binding domain KO461_RS10010 PF01381 Helix-turn-helix KO461_RS10015 PF05973 Phage derived protein Gp49-like (DUF891) KO461_RS10020 PF01985 CRS1 / YhbY (CRM) domain KO461_RS10025 PF01272 Transcription elongation factor, GreA/GreB, C-term KO461_RS10025 PF03449 Transcription elongation factor, N-terminal KO461_RS10030 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family KO461_RS10035 PF01227 GTP cyclohydrolase I KO461_RS10040 PF03453 MoeA N-terminal region (domain I and II) KO461_RS10040 PF00994 Probable molybdopterin binding domain KO461_RS10040 PF03454 MoeA C-terminal region (domain IV) KO461_RS10045 PF00899 ThiF family KO461_RS10055 PF07992 Pyridine nucleotide-disulphide oxidoreductase KO461_RS10060 PF00664 ABC transporter transmembrane region KO461_RS10060 PF00005 ABC transporter KO461_RS10065 PF00664 ABC transporter transmembrane region KO461_RS10065 PF00005 ABC transporter KO461_RS10075 PF02551 Acyl-CoA thioesterase KO461_RS10090 PF07273 Protein of unknown function (DUF1439) KO461_RS10095 PF00480 ROK family KO461_RS10100 PF01569 PAP2 superfamily KO461_RS10105 PF00925 GTP cyclohydrolase II KO461_RS10115 PF16363 GDP-mannose 4,6 dehydratase KO461_RS10120 PF06877 Regulator of ribonuclease activity B KO461_RS10120 PF05117 Family of unknown function (DUF695) KO461_RS10125 PF03372 Endonuclease/Exonuclease/phosphatase family KO461_RS10130 PF02397 Bacterial sugar transferase KO461_RS10135 PF00535 Glycosyl transferase family 2 KO461_RS10140 PF00535 Glycosyl transferase family 2 KO461_RS10150 PF00535 Glycosyl transferase family 2 KO461_RS10155 PF04138 GtrA-like protein KO461_RS10170 PF00005 ABC transporter KO461_RS10175 PF01061 ABC-2 type transporter KO461_RS10180 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KO461_RS10185 PF04321 RmlD substrate binding domain KO461_RS10190 PF00483 Nucleotidyl transferase KO461_RS10195 PF16363 GDP-mannose 4,6 dehydratase KO461_RS10200 PF13406 Transglycosylase SLT domain KO461_RS10205 PF00535 Glycosyl transferase family 2 KO461_RS10210 PF00535 Glycosyl transferase family 2 KO461_RS10220 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) KO461_RS10230 PF04230 Polysaccharide pyruvyl transferase KO461_RS10235 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KO461_RS10240 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system KO461_RS10245 PF02698 DUF218 domain KO461_RS10250 PF14743 DNA ligase OB-like domain KO461_RS10250 PF01068 ATP dependent DNA ligase domain KO461_RS10255 PF00580 UvrD/REP helicase N-terminal domain KO461_RS10255 PF13361 UvrD-like helicase C-terminal domain KO461_RS10260 PF02447 GntP family permease KO461_RS10265 PF01202 Shikimate kinase KO461_RS10270 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KO461_RS10270 PF00356 Bacterial regulatory proteins, lacI family KO461_RS10275 PF02634 FdhD/NarQ family KO461_RS10285 PF09163 Formate dehydrogenase N, transmembrane KO461_RS10285 PF13247 4Fe-4S dicluster domain KO461_RS10290 PF01292 Prokaryotic cytochrome b561 KO461_RS10295 PF17788 HypF Kae1-like domain KO461_RS10295 PF01300 Telomere recombination KO461_RS10295 PF07503 HypF finger KO461_RS10295 PF00708 Acylphosphatase KO461_RS10300 PF13247 4Fe-4S dicluster domain KO461_RS10305 PF00361 Proton-conducting membrane transporter KO461_RS10310 PF00146 NADH dehydrogenase KO461_RS10315 PF00361 Proton-conducting membrane transporter KO461_RS10315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KO461_RS10320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KO461_RS10325 PF00361 Proton-conducting membrane transporter KO461_RS10325 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KO461_RS10330 PF00374 Nickel-dependent hydrogenase KO461_RS10330 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KO461_RS10330 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KO461_RS10335 PF12838 4Fe-4S dicluster domain KO461_RS10340 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KO461_RS10345 PF07450 Formate hydrogenlyase maturation protein HycH KO461_RS10350 PF01750 Hydrogenase maturation protease KO461_RS10385 PF00549 CoA-ligase KO461_RS10385 PF02629 CoA binding domain KO461_RS10390 PF00549 CoA-ligase KO461_RS10390 PF08442 ATP-grasp domain KO461_RS10395 PF02817 e3 binding domain KO461_RS10395 PF00364 Biotin-requiring enzyme KO461_RS10395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KO461_RS10400 PF02779 Transketolase, pyrimidine binding domain KO461_RS10400 PF00676 Dehydrogenase E1 component KO461_RS10400 PF16078 2-oxoglutarate dehydrogenase N-terminus KO461_RS10400 PF16870 2-oxoglutarate dehydrogenase C-terminal KO461_RS10405 PF00753 Metallo-beta-lactamase superfamily KO461_RS10410 PF05951 Bacterial protein of unknown function (DUF882) KO461_RS10415 PF03734 L,D-transpeptidase catalytic domain KO461_RS10420 PF11818 C-terminal domain of tail specific protease (DUF3340) KO461_RS10420 PF03572 Peptidase family S41 KO461_RS10420 PF17804 Tail specific protease N-terminal domain KO461_RS10420 PF00595 PDZ domain KO461_RS10425 PF04352 ProQ/FINO family KO461_RS10425 PF17516 ProQ C-terminal domain KO461_RS10430 PF04403 Paraquat-inducible protein A KO461_RS10435 PF02470 MlaD protein KO461_RS10440 PF07687 Peptidase dimerisation domain KO461_RS10440 PF01546 Peptidase family M20/M25/M40 KO461_RS10445 PF00005 ABC transporter KO461_RS10445 PF08402 TOBE domain KO461_RS10450 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS10455 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS10460 PF13416 Bacterial extracellular solute-binding protein KO461_RS10465 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region KO461_RS10465 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KO461_RS10470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KO461_RS10470 PF02403 Seryl-tRNA synthetase N-terminal domain KO461_RS10475 PF03605 Anaerobic c4-dicarboxylate membrane transporter KO461_RS10480 PF16193 AAA C-terminal domain KO461_RS10480 PF00004 ATPase family associated with various cellular activities (AAA) KO461_RS10480 PF12002 MgsA AAA+ ATPase C terminal KO461_RS10485 PF03548 Outer membrane lipoprotein carrier protein LolA KO461_RS10490 PF01580 FtsK/SpoIIIE family KO461_RS10490 PF09397 Ftsk gamma domain KO461_RS10490 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KO461_RS10490 PF17854 FtsK alpha domain KO461_RS10495 PF01037 Lrp/AsnC ligand binding domain KO461_RS10500 PF04055 Radical SAM superfamily KO461_RS10500 PF06968 Biotin and Thiamin Synthesis associated domain KO461_RS10505 PF00005 ABC transporter KO461_RS10510 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS10520 PF08543 Phosphomethylpyrimidine kinase KO461_RS10520 PF08543 Phosphomethylpyrimidine kinase KO461_RS10555 PF09704 CRISPR-associated protein (Cas_Cas5) KO461_RS10590 PF00176 SNF2 family N-terminal domain KO461_RS10590 PF00271 Helicase conserved C-terminal domain KO461_RS10605 PF01027 Inhibitor of apoptosis-promoting Bax1 KO461_RS10610 PF04358 DsrC like protein KO461_RS10615 PF01297 Zinc-uptake complex component A periplasmic KO461_RS10620 PF00005 ABC transporter KO461_RS10625 PF00950 ABC 3 transport family KO461_RS10630 PF00950 ABC 3 transport family KO461_RS10635 PF00708 Acylphosphatase KO461_RS10640 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KO461_RS10645 PF02142 MGS-like domain KO461_RS10650 PF03733 Inner membrane component domain KO461_RS10655 PF12805 FUSC-like inner membrane protein yccS KO461_RS10660 PF01713 Smr domain KO461_RS10665 PF05175 Methyltransferase small domain KO461_RS10670 PF02779 Transketolase, pyrimidine binding domain KO461_RS10670 PF02780 Transketolase, C-terminal domain KO461_RS10675 PF00456 Transketolase, thiamine diphosphate binding domain KO461_RS10680 PF03611 PTS system sugar-specific permease component KO461_RS10710 PF04717 Type VI secretion system, phage-baseplate injector KO461_RS10715 PF06832 Penicillin-Binding Protein C-terminus Family KO461_RS10715 PF00905 Penicillin binding protein transpeptidase domain KO461_RS10715 PF00912 Transglycosylase KO461_RS10720 PF03601 Conserved hypothetical protein 698 KO461_RS10725 PF00207 Alpha-2-macroglobulin family KO461_RS10725 PF07703 Alpha-2-macroglobulin bait region domain KO461_RS10725 PF11974 Bacterial alpha-2-macroglobulin MG3 domain KO461_RS10725 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain KO461_RS10725 PF17962 Bacterial macroglobulin domain 6 KO461_RS10725 PF01835 MG2 domain KO461_RS10725 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain KO461_RS10730 PF01523 Putative modulator of DNA gyrase KO461_RS10735 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KO461_RS10735 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KO461_RS10745 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS10760 PF06097 Bacterial protein of unknown function (DUF945) KO461_RS10765 PF00012 Hsp70 protein KO461_RS10770 PF00226 DnaJ domain KO461_RS10770 PF01556 DnaJ C terminal domain KO461_RS10770 PF00684 DnaJ central domain KO461_RS10775 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KO461_RS10785 PF13609 Gram-negative porin KO461_RS10790 PF01053 Cys/Met metabolism PLP-dependent enzyme KO461_RS10795 PF01066 CDP-alcohol phosphatidyltransferase KO461_RS10815 PF13276 HTH-like domain KO461_RS10815 PF13333 Integrase core domain KO461_RS10815 PF00665 Integrase core domain KO461_RS10825 PF02146 Sir2 family KO461_RS10830 PF04399 Glutaredoxin 2, C terminal domain KO461_RS10830 PF13417 Glutathione S-transferase, N-terminal domain KO461_RS10835 PF00575 S1 RNA binding domain KO461_RS10835 PF10150 Ribonuclease E/G family KO461_RS10840 PF00474 Sodium:solute symporter family KO461_RS10845 PF08003 Protein of unknown function (DUF1698) KO461_RS10850 PF00709 Adenylosuccinate synthetase KO461_RS10860 PF01556 DnaJ C terminal domain KO461_RS10860 PF00226 DnaJ domain KO461_RS10865 PF01926 50S ribosome-binding GTPase KO461_RS10865 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KO461_RS10870 PF07690 Major Facilitator Superfamily KO461_RS10880 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) KO461_RS10885 PF00485 Phosphoribulokinase / Uridine kinase family KO461_RS10900 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS10905 PF00005 ABC transporter KO461_RS10905 PF08402 TOBE domain KO461_RS10925 PF03458 UPF0126 domain KO461_RS10935 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KO461_RS10940 PF01225 Mur ligase family, catalytic domain KO461_RS10940 PF02875 Mur ligase family, glutamate ligase domain KO461_RS10940 PF08245 Mur ligase middle domain KO461_RS10950 PF06725 3D domain KO461_RS10950 PF03562 MltA specific insert domain KO461_RS10955 PF00899 ThiF family KO461_RS10960 PF01297 Zinc-uptake complex component A periplasmic KO461_RS10965 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KO461_RS10970 PF00892 EamA-like transporter family KO461_RS10980 PF03658 RnfH family Ubiquitin KO461_RS10985 PF08007 Cupin superfamily protein KO461_RS10990 PF02601 Exonuclease VII, large subunit KO461_RS10990 PF13742 OB-fold nucleic acid binding domain KO461_RS10995 PF03668 P-loop ATPase protein family KO461_RS11000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KO461_RS11005 PF12399 Branched-chain amino acid ATP-binding cassette transporter KO461_RS11005 PF00005 ABC transporter KO461_RS11010 PF03968 OstA-like protein KO461_RS11015 PF06835 Lipopolysaccharide-assembly, LptC-related KO461_RS11020 PF00005 ABC transporter KO461_RS11025 PF02405 Permease MlaE KO461_RS11030 PF02470 MlaD protein KO461_RS11035 PF05494 MlaC protein KO461_RS11040 PF13466 STAS domain KO461_RS11045 PF01722 BolA-like protein KO461_RS11050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KO461_RS11055 PF04175 Protein of unknown function (DUF406) KO461_RS11060 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KO461_RS11065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KO461_RS11065 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KO461_RS11070 PF02976 DNA mismatch repair enzyme MutH KO461_RS11075 PF03741 Integral membrane protein TerC family KO461_RS11080 PF00120 Glutamine synthetase, catalytic domain KO461_RS11080 PF03951 Glutamine synthetase, beta-Grasp domain KO461_RS11085 PF03144 Elongation factor Tu domain 2 KO461_RS11085 PF00679 Elongation factor G C-terminus KO461_RS11085 PF00009 Elongation factor Tu GTP binding domain KO461_RS11090 PF03797 Autotransporter beta-domain KO461_RS11090 PF02395 Immunoglobulin A1 protease KO461_RS11090 PF03212 Pertactin KO461_RS11095 PF00578 AhpC/TSA family KO461_RS11100 PF00701 Dihydrodipicolinate synthetase family KO461_RS11105 PF06804 NlpB/DapX lipoprotein KO461_RS11110 PF00528 Binding-protein-dependent transport system inner membrane component KO461_RS11115 PF00005 ABC transporter KO461_RS11115 PF00571 CBS domain KO461_RS11120 PF01168 Alanine racemase, N-terminal domain KO461_RS11130 PF03447 Homoserine dehydrogenase, NAD binding domain KO461_RS11130 PF00742 Homoserine dehydrogenase KO461_RS11130 PF00696 Amino acid kinase family KO461_RS11130 PF13840 ACT domain KO461_RS11130 PF01842 ACT domain KO461_RS11135 PF08544 GHMP kinases C terminal KO461_RS11135 PF00288 GHMP kinases N terminal domain KO461_RS11145 PF00291 Pyridoxal-phosphate dependent enzyme KO461_RS11145 PF14821 Threonine synthase N terminus KO461_RS11150 PF01648 4'-phosphopantetheinyl transferase superfamily KO461_RS11155 PF01145 SPFH domain / Band 7 family KO461_RS11160 PF01145 SPFH domain / Band 7 family KO461_RS11165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KO461_RS11165 PF05698 Bacterial trigger factor protein (TF) C-terminus KO461_RS11165 PF05697 Bacterial trigger factor protein (TF) KO461_RS11170 PF00589 Phage integrase family KO461_RS11170 PF02899 Phage integrase, N-terminal SAM-like domain KO461_RS11180 PF04381 Putative exonuclease, RdgC KO461_RS11190 PF04225 Opacity-associated protein A LysM-like domain KO461_RS11190 PF08525 Opacity-associated protein A N-terminal motif KO461_RS11195 PF04055 Radical SAM superfamily KO461_RS11200 PF09285 Elongation factor P, C-terminal KO461_RS11200 PF08207 Elongation factor P (EF-P) KOW-like domain KO461_RS11200 PF01132 Elongation factor P (EF-P) OB domain KO461_RS11205 PF01212 Beta-eliminating lyase KO461_RS11210 PF03222 Tryptophan/tyrosine permease family KO461_RS11215 PF08348 YheO-like PAS domain KO461_RS11215 PF13309 HTH domain KO461_RS11220 PF10063 Uncharacterized integral membrane protein (DUF2301) KO461_RS11225 PF00149 Calcineurin-like phosphoesterase KO461_RS11230 PF01553 Acyltransferase KO461_RS11235 PF07732 Multicopper oxidase KO461_RS11240 PF00892 EamA-like transporter family KO461_RS11245 PF04055 Radical SAM superfamily KO461_RS11250 PF01228 Glycine radical KO461_RS11250 PF02901 Pyruvate formate lyase-like KO461_RS11255 PF01226 Formate/nitrite transporter KO461_RS11260 PF01230 HIT domain KO461_RS11270 PF00933 Glycosyl hydrolase family 3 N terminal domain KO461_RS11275 PF05958 tRNA (Uracil-5-)-methyltransferase KO461_RS11280 PF05958 tRNA (Uracil-5-)-methyltransferase KO461_RS11285 PF00365 Phosphofructokinase KO461_RS11290 PF16916 Dimerisation domain of Zinc Transporter KO461_RS11290 PF01545 Cation efflux family KO461_RS11300 PF03883 Peroxide stress protein YaaA KO461_RS11305 PF03167 Uracil DNA glycosylase superfamily KO461_RS11310 PF01228 Glycine radical KO461_RS11315 PF00679 Elongation factor G C-terminus KO461_RS11315 PF00009 Elongation factor Tu GTP binding domain KO461_RS11315 PF03144 Elongation factor Tu domain 2 KO461_RS11315 PF06421 GTP-binding protein LepA C-terminus KO461_RS11320 PF10502 Signal peptidase, peptidase S26 KO461_RS11325 PF00035 Double-stranded RNA binding motif KO461_RS11325 PF14622 Ribonuclease-III-like KO461_RS11330 PF07650 KH domain KO461_RS11330 PF01926 50S ribosome-binding GTPase KO461_RS11335 PF10396 GTP-binding protein TrmE N-terminus KO461_RS11335 PF01926 50S ribosome-binding GTPase KO461_RS11335 PF12631 MnmE helical domain KO461_RS11340 PF02096 60Kd inner membrane protein KO461_RS11340 PF14849 YidC periplasmic domain KO461_RS11345 PF01809 Putative membrane protein insertion efficiency factor KO461_RS11350 PF00825 Ribonuclease P KO461_RS11355 PF00468 Ribosomal protein L34 KO461_RS11405 PF03611 PTS system sugar-specific permease component