locus-tag class description At12D13_RS00005 PF00308 Bacterial dnaA protein At12D13_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix At12D13_RS00005 PF11638 DnaA N-terminal domain At12D13_RS00010 PF06969 HemN C-terminal domain At12D13_RS00010 PF04055 Radical SAM superfamily At12D13_RS00015 PF01725 Ham1 family At12D13_RS00020 PF03725 3' exoribonuclease family, domain 2 At12D13_RS00020 PF01138 3' exoribonuclease family, domain 1 At12D13_RS00025 PF01628 HrcA protein C terminal domain At12D13_RS00030 PF01025 GrpE At12D13_RS00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 At12D13_RS00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus At12D13_RS00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein At12D13_RS00045 PF04552 Sigma-54, DNA binding domain At12D13_RS00045 PF04963 Sigma-54 factor, core binding domain At12D13_RS00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) At12D13_RS00050 PF00005 ABC transporter At12D13_RS00055 PF03968 OstA-like protein At12D13_RS00065 PF01343 Peptidase family S49 At12D13_RS00070 PF00216 Bacterial DNA-binding protein At12D13_RS00080 PF10672 S-adenosylmethionine-dependent methyltransferase At12D13_RS00080 PF02926 THUMP domain At12D13_RS00080 PF01170 Putative RNA methylase family UPF0020 At12D13_RS00085 PF00588 SpoU rRNA Methylase family At12D13_RS00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding At12D13_RS00090 PF01252 Signal peptidase (SPase) II At12D13_RS00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) At12D13_RS00095 PF00072 Response regulator receiver domain At12D13_RS00095 PF01627 Hpt domain At12D13_RS00095 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS00095 PF00672 HAMP domain At12D13_RS00105 PF05188 MutS domain II At12D13_RS00105 PF05192 MutS domain III At12D13_RS00105 PF05190 MutS family domain IV At12D13_RS00105 PF00488 MutS domain V At12D13_RS00105 PF01624 MutS domain I At12D13_RS00110 PF01909 Nucleotidyltransferase domain At12D13_RS00110 PF01966 HD domain At12D13_RS00110 PF08335 GlnD PII-uridylyltransferase At12D13_RS00110 PF01842 ACT domain At12D13_RS00115 PF03023 Lipid II flippase MurJ At12D13_RS00125 PF00579 tRNA synthetases class I (W and Y) At12D13_RS00135 PF01106 NifU-like domain At12D13_RS00140 PF00814 Glycoprotease family At12D13_RS00145 PF00583 Acetyltransferase (GNAT) family At12D13_RS00145 PF13508 Acetyltransferase (GNAT) domain At12D13_RS00150 PF01475 Ferric uptake regulator family At12D13_RS00155 PF01553 Acyltransferase At12D13_RS00160 PF04055 Radical SAM superfamily At12D13_RS00160 PF01938 TRAM domain At12D13_RS00160 PF00919 Uncharacterized protein family UPF0004 At12D13_RS00165 PF02562 PhoH-like protein At12D13_RS00170 PF02130 Uncharacterized protein family UPF0054 At12D13_RS00175 PF00571 CBS domain At12D13_RS00175 PF03471 Transporter associated domain At12D13_RS00180 PF00795 Carbon-nitrogen hydrolase At12D13_RS00185 PF01381 Helix-turn-helix At12D13_RS00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain At12D13_RS00190 PF02772 S-adenosylmethionine synthetase, central domain At12D13_RS00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain At12D13_RS00195 PF02390 Putative methyltransferase At12D13_RS00200 PF00294 pfkB family carbohydrate kinase At12D13_RS00205 PF02646 RmuC family At12D13_RS00210 PF01327 Polypeptide deformylase At12D13_RS00215 PF00551 Formyl transferase At12D13_RS00215 PF02911 Formyl transferase, C-terminal domain At12D13_RS00220 PF01416 tRNA pseudouridine synthase At12D13_RS00230 PF01546 Peptidase family M20/M25/M40 At12D13_RS00230 PF07687 Peptidase dimerisation domain At12D13_RS00235 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_RS00235 PF14602 Hexapeptide repeat of succinyl-transferase At12D13_RS00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal At12D13_RS00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS00245 PF00672 HAMP domain At12D13_RS00250 PF01156 Inosine-uridine preferring nucleoside hydrolase At12D13_RS00255 PF00011 Hsp20/alpha crystallin family At12D13_RS00280 PF00696 Amino acid kinase family At12D13_RS00295 PF01926 50S ribosome-binding GTPase At12D13_RS00300 PF14849 YidC periplasmic domain At12D13_RS00300 PF02096 60Kd inner membrane protein At12D13_RS00305 PF00825 Ribonuclease P At12D13_RS00310 PF00468 Ribosomal protein L34 At12D13_RS00320 PF02203 Tar ligand binding domain homologue At12D13_RS00320 PF00672 HAMP domain At12D13_RS00320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS00325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS00325 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS00355 PF00075 RNase H At12D13_RS00380 PF00239 Resolvase, N terminal domain At12D13_RS00380 PF02796 Helix-turn-helix domain of resolvase At12D13_RS00390 PF00145 C-5 cytosine-specific DNA methylase At12D13_RS00400 PF01209 ubiE/COQ5 methyltransferase family At12D13_RS00405 PF00005 ABC transporter At12D13_RS00410 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS00415 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS00425 PF00149 Calcineurin-like phosphoesterase At12D13_RS00430 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain At12D13_RS00430 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain At12D13_RS00440 PF05544 Proline racemase At12D13_RS00445 PF01979 Amidohydrolase family At12D13_RS00450 PF00156 Phosphoribosyl transferase domain At12D13_RS00455 PF00294 pfkB family carbohydrate kinase At12D13_RS00470 PF00342 Phosphoglucose isomerase At12D13_RS00475 PF13193 AMP-binding enzyme C-terminal domain At12D13_RS00475 PF00501 AMP-binding enzyme At12D13_RS00480 PF00005 ABC transporter At12D13_RS00480 PF08402 TOBE domain At12D13_RS00490 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS00495 PF00593 TonB dependent receptor At12D13_RS00495 PF07715 TonB-dependent Receptor Plug Domain At12D13_RS00515 PF01679 Proteolipid membrane potential modulator At12D13_RS00525 PF02796 Helix-turn-helix domain of resolvase At12D13_RS00525 PF00239 Resolvase, N terminal domain At12D13_RS00560 PF03976 Polyphosphate kinase 2 (PPK2) At12D13_RS00565 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS00565 PF00989 PAS fold At12D13_RS00565 PF16736 Single Cache-like At12D13_RS00565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS00570 PF12849 PBP superfamily domain At12D13_RS00575 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS00580 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS00585 PF00005 ABC transporter At12D13_RS00590 PF01895 PhoU domain At12D13_RS00595 PF00072 Response regulator receiver domain At12D13_RS00595 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS00610 PF00202 Aminotransferase class-III At12D13_RS00615 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain At12D13_RS00615 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain At12D13_RS00620 PF01430 Hsp33 protein At12D13_RS00625 PF04379 ApaG domain At12D13_RS00630 PF01053 Cys/Met metabolism PLP-dependent enzyme At12D13_RS00635 PF00692 dUTPase At12D13_RS00645 PF02469 Fasciclin domain At12D13_RS00665 PF00230 Major intrinsic protein At12D13_RS00705 PF00196 Bacterial regulatory proteins, luxR family At12D13_RS00705 PF00072 Response regulator receiver domain At12D13_RS00715 PF01180 Dihydroorotate dehydrogenase At12D13_RS00750 PF02082 Transcriptional regulator At12D13_RS00755 PF00270 DEAD/DEAH box helicase At12D13_RS00755 PF08494 DEAD/H associated At12D13_RS00755 PF00271 Helicase conserved C-terminal domain At12D13_RS00775 PF01925 Sulfite exporter TauE/SafE At12D13_RS00790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_RS00790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At12D13_RS00790 PF02770 Acyl-CoA dehydrogenase, middle domain At12D13_RS00790 PF12806 Acetyl-CoA dehydrogenase C-terminal like At12D13_RS00795 PF00108 Thiolase, N-terminal domain At12D13_RS00795 PF02803 Thiolase, C-terminal domain At12D13_RS00805 PF00378 Enoyl-CoA hydratase/isomerase At12D13_RS00805 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain At12D13_RS00805 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain At12D13_RS00830 PF03334 Na+/H+ antiporter subunit At12D13_RS00835 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) At12D13_RS00840 PF01899 Na+/H+ ion antiporter subunit At12D13_RS00845 PF00361 Proton-conducting membrane transporter At12D13_RS00850 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L At12D13_RS00855 PF00361 Proton-conducting membrane transporter At12D13_RS00855 PF13244 Domain of unknown function (DUF4040) At12D13_RS00855 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus At12D13_RS00855 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter At12D13_RS00865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS00875 PF00072 Response regulator receiver domain At12D13_RS00880 PF01627 Hpt domain At12D13_RS00880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS00880 PF02895 Signal transducing histidine kinase, homodimeric domain At12D13_RS00880 PF01584 CheW-like domain At12D13_RS00885 PF03705 CheR methyltransferase, all-alpha domain At12D13_RS00885 PF01739 CheR methyltransferase, SAM binding domain At12D13_RS00890 PF00072 Response regulator receiver domain At12D13_RS00890 PF01339 CheB methylesterase At12D13_RS00895 PF00072 Response regulator receiver domain At12D13_RS00900 PF03975 CheD chemotactic sensory transduction At12D13_RS00910 PF01514 Secretory protein of YscJ/FliF family At12D13_RS00910 PF08345 Flagellar M-ring protein C-terminal At12D13_RS00915 PF03472 Autoinducer binding domain At12D13_RS00915 PF00196 Bacterial regulatory proteins, luxR family At12D13_RS00925 PF00672 HAMP domain At12D13_RS00925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS00930 PF00672 HAMP domain At12D13_RS00930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS00930 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS00930 PF01627 Hpt domain At12D13_RS00930 PF00072 Response regulator receiver domain At12D13_RS00935 PF01741 Large-conductance mechanosensitive channel, MscL At12D13_RS00940 PF00155 Aminotransferase class I and II At12D13_RS00945 PF01370 NAD dependent epimerase/dehydratase family At12D13_RS00955 PF03884 DNA gyrase inhibitor YacG At12D13_RS00960 PF02545 Maf-like protein At12D13_RS00965 PF01176 Translation initiation factor 1A / IF-1 At12D13_RS00975 PF06793 Uncharacterised protein family (UPF0262) At12D13_RS00980 PF00815 Histidinol dehydrogenase At12D13_RS00990 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) At12D13_RS01005 PF00700 Bacterial flagellin C-terminal helical region At12D13_RS01005 PF00669 Bacterial flagellin N-terminal helical region At12D13_RS01010 PF00700 Bacterial flagellin C-terminal helical region At12D13_RS01010 PF00669 Bacterial flagellin N-terminal helical region At12D13_RS01020 PF00700 Bacterial flagellin C-terminal helical region At12D13_RS01020 PF00669 Bacterial flagellin N-terminal helical region At12D13_RS01025 PF00813 FliP family At12D13_RS01035 PF02107 Flagellar L-ring protein At12D13_RS01045 PF02119 Flagellar P-ring protein At12D13_RS01050 PF13144 Chaperone for flagella basal body P-ring formation At12D13_RS01055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At12D13_RS01055 PF00460 Flagella basal body rod protein At12D13_RS01060 PF02049 Flagellar hook-basal body complex protein FliE At12D13_RS01065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At12D13_RS01070 PF00460 Flagella basal body rod protein At12D13_RS01080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At12D13_RS01080 PF18269 T3SS EscN ATPase C-terminal domain At12D13_RS01085 PF00460 Flagella basal body rod protein At12D13_RS01085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At12D13_RS01095 PF01618 MotA/TolQ/ExbB proton channel family At12D13_RS01100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term At12D13_RS01105 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term At12D13_RS01110 PF14841 FliG middle domain At12D13_RS01110 PF01706 FliG C-terminal domain At12D13_RS01110 PF14842 FliG N-terminal domain At12D13_RS01115 PF01312 FlhB HrpN YscU SpaS Family At12D13_RS01130 PF00700 Bacterial flagellin C-terminal helical region At12D13_RS01130 PF00669 Bacterial flagellin N-terminal helical region At12D13_RS01140 PF00691 OmpA family At12D13_RS01140 PF13677 Membrane MotB of proton-channel complex MotA/MotB At12D13_RS01150 PF02120 Flagellar hook-length control protein FliK At12D13_RS01160 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS01165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At12D13_RS01165 PF00460 Flagella basal body rod protein At12D13_RS01165 PF07559 Flagellar basal body protein FlaE At12D13_RS01185 PF07378 Flagellar protein FlbT At12D13_RS01190 PF03963 Flagellar hook capping protein - N-terminal region At12D13_RS01195 PF01313 Bacterial export proteins, family 3 At12D13_RS01200 PF00771 FHIPEP family At12D13_RS01205 PF01311 Bacterial export proteins, family 1 At12D13_RS01240 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain At12D13_RS01240 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain At12D13_RS01245 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS01250 PF01547 Bacterial extracellular solute-binding protein At12D13_RS01255 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS01260 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS01265 PF00128 Alpha amylase, catalytic domain At12D13_RS01270 PF00005 ABC transporter At12D13_RS01270 PF17912 MalK OB fold domain At12D13_RS01270 PF03459 TOBE domain At12D13_RS01280 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH At12D13_RS01295 PF00920 Dehydratase family At12D13_RS01300 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase At12D13_RS01305 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain At12D13_RS01305 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain At12D13_RS01310 PF01266 FAD dependent oxidoreductase At12D13_RS01315 PF00120 Glutamine synthetase, catalytic domain At12D13_RS01340 PF00463 Isocitrate lyase family At12D13_RS01345 PF09856 Predicted transcriptional regulator (DUF2083) At12D13_RS01345 PF01381 Helix-turn-helix At12D13_RS01345 PF06114 IrrE N-terminal-like domain At12D13_RS01350 PF13416 Bacterial extracellular solute-binding protein At12D13_RS01355 PF00005 ABC transporter At12D13_RS01355 PF08402 TOBE domain At12D13_RS01360 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS01365 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS01375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS01375 PF13426 PAS domain At12D13_RS01375 PF13188 PAS domain At12D13_RS01375 PF00989 PAS fold At12D13_RS01375 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS01385 PF02541 Ppx/GppA phosphatase family At12D13_RS01390 PF01728 FtsJ-like methyltransferase At12D13_RS01395 PF07690 Major Facilitator Superfamily At12D13_RS01400 PF00753 Metallo-beta-lactamase superfamily At12D13_RS01410 PF00571 CBS domain At12D13_RS01410 PF00478 IMP dehydrogenase / GMP reductase domain At12D13_RS01420 PF00107 Zinc-binding dehydrogenase At12D13_RS01420 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS01425 PF01738 Dienelactone hydrolase family At12D13_RS01430 PF00672 HAMP domain At12D13_RS01430 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS01430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS01435 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS01435 PF00072 Response regulator receiver domain At12D13_RS01445 PF00994 Probable molybdopterin binding domain At12D13_RS01450 PF00288 GHMP kinases N terminal domain At12D13_RS01450 PF08544 GHMP kinases C terminal At12D13_RS01460 PF00348 Polyprenyl synthetase At12D13_RS01475 PF01343 Peptidase family S49 At12D13_RS01475 PF06965 Na+/H+ antiporter 1 At12D13_RS01485 PF02091 Glycyl-tRNA synthetase alpha subunit At12D13_RS01495 PF04011 LemA family At12D13_RS01500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) At12D13_RS01510 PF02092 Glycyl-tRNA synthetase beta subunit At12D13_RS01510 PF05746 DALR anticodon binding domain At12D13_RS01520 PF04463 Protein of unknown function (DUF523) At12D13_RS01525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS01525 PF00672 HAMP domain At12D13_RS01535 PF02844 Phosphoribosylglycinamide synthetase, N domain At12D13_RS01535 PF02843 Phosphoribosylglycinamide synthetase, C domain At12D13_RS01535 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain At12D13_RS01545 PF00575 S1 RNA binding domain At12D13_RS01545 PF09371 Tex-like protein N-terminal domain At12D13_RS01545 PF16921 Tex protein YqgF-like domain At12D13_RS01545 PF17674 HHH domain At12D13_RS01560 PF01040 UbiA prenyltransferase family At12D13_RS01575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS01575 PF03466 LysR substrate binding domain At12D13_RS01585 PF04107 Glutamate-cysteine ligase family 2(GCS2) At12D13_RS01590 PF04452 RNA methyltransferase At12D13_RS01595 PF01384 Phosphate transporter family At12D13_RS01605 PF05116 Sucrose-6F-phosphate phosphohydrolase At12D13_RS01610 PF00534 Glycosyl transferases group 1 At12D13_RS01610 PF13439 Glycosyltransferase Family 4 At12D13_RS01615 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS01615 PF07729 FCD domain At12D13_RS01630 PF03466 LysR substrate binding domain At12D13_RS01630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS01635 PF02913 FAD linked oxidases, C-terminal domain At12D13_RS01635 PF01565 FAD binding domain At12D13_RS01645 PF01565 FAD binding domain At12D13_RS01645 PF02913 FAD linked oxidases, C-terminal domain At12D13_RS01650 PF02754 Cysteine-rich domain At12D13_RS01650 PF13183 4Fe-4S dicluster domain At12D13_RS01660 PF17969 L,D-transpeptidase C-terminal domain At12D13_RS01660 PF03734 L,D-transpeptidase catalytic domain At12D13_RS01665 PF13673 Acetyltransferase (GNAT) domain At12D13_RS01665 PF13302 Acetyltransferase (GNAT) domain At12D13_RS01665 PF03352 Methyladenine glycosylase At12D13_RS01665 PF00117 Glutamine amidotransferase class-I At12D13_RS01665 PF00958 GMP synthase C terminal domain At12D13_RS01675 PF03601 Conserved hypothetical protein 698 At12D13_RS01680 PF03466 LysR substrate binding domain At12D13_RS01680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS01700 PF03129 Anticodon binding domain At12D13_RS01700 PF13393 Histidyl-tRNA synthetase At12D13_RS01710 PF13393 Histidyl-tRNA synthetase At12D13_RS01715 PF01634 ATP phosphoribosyltransferase At12D13_RS01720 PF07681 DoxX At12D13_RS01735 PF00118 TCP-1/cpn60 chaperonin family At12D13_RS01740 PF00166 Chaperonin 10 Kd subunit At12D13_RS01750 PF01687 Riboflavin kinase At12D13_RS01750 PF06574 FAD synthetase At12D13_RS01755 PF00133 tRNA synthetases class I (I, L, M and V) At12D13_RS01755 PF08264 Anticodon-binding domain of tRNA At12D13_RS01765 PF14437 MafB19-like deaminase At12D13_RS01770 PF00849 RNA pseudouridylate synthase At12D13_RS01770 PF01479 S4 domain At12D13_RS01780 PF01734 Patatin-like phospholipase At12D13_RS01785 PF00999 Sodium/hydrogen exchanger family At12D13_RS01785 PF02254 TrkA-N domain At12D13_RS01790 PF01523 Putative modulator of DNA gyrase At12D13_RS01795 PF00459 Inositol monophosphatase family At12D13_RS01805 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) At12D13_RS01805 PF00534 Glycosyl transferases group 1 At12D13_RS01815 PF02606 Tetraacyldisaccharide-1-P 4'-kinase At12D13_RS01825 PF08676 MutL C terminal dimerisation domain At12D13_RS01825 PF01119 DNA mismatch repair protein, C-terminal domain At12D13_RS01830 PF00072 Response regulator receiver domain At12D13_RS01830 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS01830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS01830 PF09456 RcsC Alpha-Beta-Loop (ABL) At12D13_RS01835 PF13188 PAS domain At12D13_RS01835 PF03707 Bacterial signalling protein N terminal repeat At12D13_RS01835 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS01835 PF00563 EAL domain At12D13_RS01840 PF08450 SMP-30/Gluconolactonase/LRE-like region At12D13_RS01845 PF01081 KDPG and KHG aldolase At12D13_RS01850 PF05035 2-keto-3-deoxy-galactonokinase At12D13_RS01865 PF03472 Autoinducer binding domain At12D13_RS01865 PF00196 Bacterial regulatory proteins, luxR family At12D13_RS01875 PF10609 NUBPL iron-transfer P-loop NTPase At12D13_RS01880 PF01544 CorA-like Mg2+ transporter protein At12D13_RS01885 PF02705 K+ potassium transporter At12D13_RS01895 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter At12D13_RS01900 PF00119 ATP synthase A chain At12D13_RS01905 PF00137 ATP synthase subunit C At12D13_RS01910 PF00430 ATP synthase B/B' CF(0) At12D13_RS01915 PF00430 ATP synthase B/B' CF(0) At12D13_RS01925 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_RS01930 PF01351 Ribonuclease HII At12D13_RS01945 PF01565 FAD binding domain At12D13_RS01945 PF02913 FAD linked oxidases, C-terminal domain At12D13_RS01950 PF01300 Telomere recombination At12D13_RS01950 PF03481 Putative GTP-binding controlling metal-binding At12D13_RS01960 PF00848 Ring hydroxylating alpha subunit (catalytic domain) At12D13_RS01960 PF00355 Rieske [2Fe-2S] domain At12D13_RS01965 PF00175 Oxidoreductase NAD-binding domain At12D13_RS01965 PF00111 2Fe-2S iron-sulfur cluster binding domain At12D13_RS01965 PF00970 Oxidoreductase FAD-binding domain At12D13_RS01970 PF07886 BA14K-like protein At12D13_RS01975 PF07886 BA14K-like protein At12D13_RS01985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At12D13_RS01985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_RS01985 PF02770 Acyl-CoA dehydrogenase, middle domain At12D13_RS01985 PF12806 Acetyl-CoA dehydrogenase C-terminal like At12D13_RS02005 PF05958 tRNA (Uracil-5-)-methyltransferase At12D13_RS02010 PF01728 FtsJ-like methyltransferase At12D13_RS02010 PF01479 S4 domain At12D13_RS02015 PF00672 HAMP domain At12D13_RS02015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS02025 PF13404 AsnC-type helix-turn-helix domain At12D13_RS02025 PF01037 Lrp/AsnC ligand binding domain At12D13_RS02055 PF02780 Transketolase, C-terminal domain At12D13_RS02055 PF02779 Transketolase, pyrimidine binding domain At12D13_RS02055 PF13292 1-deoxy-D-xylulose-5-phosphate synthase At12D13_RS02060 PF05726 Pirin C-terminal cupin domain At12D13_RS02060 PF02678 Pirin At12D13_RS02065 PF02609 Exonuclease VII small subunit At12D13_RS02070 PF00850 Histone deacetylase domain At12D13_RS02075 PF02632 BioY family At12D13_RS02080 PF02361 Cobalt transport protein At12D13_RS02085 PF00005 ABC transporter At12D13_RS02090 PF06224 Winged helix DNA-binding domain At12D13_RS02095 PF00925 GTP cyclohydrolase II At12D13_RS02095 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase At12D13_RS02100 PF01264 Chorismate synthase At12D13_RS02110 PF00300 Histidine phosphatase superfamily (branch 1) At12D13_RS02120 PF00226 DnaJ domain At12D13_RS02120 PF01556 DnaJ C terminal domain At12D13_RS02120 PF00684 DnaJ central domain At12D13_RS02130 PF01243 Pyridoxamine 5'-phosphate oxidase At12D13_RS02130 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region At12D13_RS02145 PF13419 Haloacid dehalogenase-like hydrolase At12D13_RS02155 PF01523 Putative modulator of DNA gyrase At12D13_RS02165 PF00116 Cytochrome C oxidase subunit II, periplasmic domain At12D13_RS02165 PF02790 Cytochrome C oxidase subunit II, transmembrane domain At12D13_RS02170 PF00115 Cytochrome C and Quinol oxidase polypeptide I At12D13_RS02175 PF01040 UbiA prenyltransferase family At12D13_RS02185 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 At12D13_RS02190 PF00510 Cytochrome c oxidase subunit III At12D13_RS02200 PF02104 SURF1 family At12D13_RS02205 PF02401 LytB protein At12D13_RS02210 PF01636 Phosphotransferase enzyme family At12D13_RS02215 PF00075 RNase H At12D13_RS02230 PF00462 Glutaredoxin At12D13_RS02230 PF08534 Redoxin At12D13_RS02240 PF02622 Uncharacterized ACR, COG1678 At12D13_RS02250 PF15887 Putative zinc-binding metallo-peptidase At12D13_RS02250 PF10005 zinc-ribbon domain At12D13_RS02255 PF13185 GAF domain At12D13_RS02255 PF00563 EAL domain At12D13_RS02255 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS02260 PF13302 Acetyltransferase (GNAT) domain At12D13_RS02265 PF05193 Peptidase M16 inactive domain At12D13_RS02265 PF00675 Insulinase (Peptidase family M16) At12D13_RS02270 PF00291 Pyridoxal-phosphate dependent enzyme At12D13_RS02270 PF14821 Threonine synthase N terminus At12D13_RS02280 PF13419 Haloacid dehalogenase-like hydrolase At12D13_RS02285 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS02285 PF07729 FCD domain At12D13_RS02305 PF01555 DNA methylase At12D13_RS02305 PF18755 Restriction Enzyme Adenine Methylase Associated At12D13_RS02315 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH At12D13_RS02330 PF00730 HhH-GPD superfamily base excision DNA repair protein At12D13_RS02330 PF14815 NUDIX domain At12D13_RS02340 PF13462 Thioredoxin At12D13_RS02345 PF02463 RecF/RecN/SMC N terminal domain At12D13_RS02355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At12D13_RS02360 PF02896 PEP-utilising enzyme, TIM barrel domain At12D13_RS02360 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain At12D13_RS02360 PF00391 PEP-utilising enzyme, mobile domain At12D13_RS02375 PF00375 Sodium:dicarboxylate symporter family At12D13_RS02415 PF06039 Malate:quinone oxidoreductase (Mqo) At12D13_RS02440 PF00009 Elongation factor Tu GTP binding domain At12D13_RS02445 PF01507 Phosphoadenosine phosphosulfate reductase family At12D13_RS02450 PF01507 Phosphoadenosine phosphosulfate reductase family At12D13_RS02455 PF02082 Transcriptional regulator At12D13_RS02465 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS02470 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS02475 PF12857 TOBE-like domain At12D13_RS02475 PF00005 ABC transporter At12D13_RS02490 PF00109 Beta-ketoacyl synthase, N-terminal domain At12D13_RS02490 PF00550 Phosphopantetheine attachment site At12D13_RS02490 PF08659 KR domain At12D13_RS02490 PF14765 Polyketide synthase dehydratase At12D13_RS02490 PF00698 Acyl transferase domain At12D13_RS02490 PF02801 Beta-ketoacyl synthase, C-terminal domain At12D13_RS02490 PF00107 Zinc-binding dehydrogenase At12D13_RS02490 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS02490 PF16197 Ketoacyl-synthetase C-terminal extension At12D13_RS02495 PF01590 GAF domain At12D13_RS02495 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS02495 PF00989 PAS fold At12D13_RS02495 PF00563 EAL domain At12D13_RS02505 PF00440 Bacterial regulatory proteins, tetR family At12D13_RS02505 PF13977 BetI-type transcriptional repressor, C-terminal At12D13_RS02510 PF00171 Aldehyde dehydrogenase family At12D13_RS02520 PF05199 GMC oxidoreductase At12D13_RS02520 PF00732 GMC oxidoreductase At12D13_RS02535 PF00654 Voltage gated chloride channel At12D13_RS02565 PF07690 Major Facilitator Superfamily At12D13_RS02575 PF01068 ATP dependent DNA ligase domain At12D13_RS02575 PF04679 ATP dependent DNA ligase C terminal region At12D13_RS02575 PF04675 DNA ligase N terminus At12D13_RS02585 PF04488 Glycosyltransferase sugar-binding region containing DXD motif At12D13_RS02590 PF00403 Heavy-metal-associated domain At12D13_RS02595 PF17969 L,D-transpeptidase C-terminal domain At12D13_RS02595 PF03734 L,D-transpeptidase catalytic domain At12D13_RS02600 PF17969 L,D-transpeptidase C-terminal domain At12D13_RS02600 PF03734 L,D-transpeptidase catalytic domain At12D13_RS02605 PF01047 MarR family At12D13_RS02610 PF02566 OsmC-like protein At12D13_RS02625 PF12848 ABC transporter At12D13_RS02625 PF00005 ABC transporter At12D13_RS02635 PF01047 MarR family At12D13_RS02655 PF03466 LysR substrate binding domain At12D13_RS02655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS02660 PF00106 short chain dehydrogenase At12D13_RS02675 PF05872 Bacterial protein of unknown function (DUF853) At12D13_RS02690 PF01638 HxlR-like helix-turn-helix At12D13_RS02695 PF00106 short chain dehydrogenase At12D13_RS02700 PF12833 Helix-turn-helix domain At12D13_RS02715 PF00248 Aldo/keto reductase family At12D13_RS02720 PF01062 Bestrophin, RFP-TM, chloride channel At12D13_RS02725 PF08279 HTH domain At12D13_RS02725 PF13280 WYL domain At12D13_RS02740 PF01063 Amino-transferase class IV At12D13_RS02745 PF02203 Tar ligand binding domain homologue At12D13_RS02745 PF00672 HAMP domain At12D13_RS02745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS02750 PF03466 LysR substrate binding domain At12D13_RS02750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS02765 PF02777 Iron/manganese superoxide dismutases, C-terminal domain At12D13_RS02765 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain At12D13_RS02775 PF08279 HTH domain At12D13_RS02775 PF13280 WYL domain At12D13_RS02780 PF01810 LysE type translocator At12D13_RS02785 PF01322 Cytochrome C' At12D13_RS02790 PF00034 Cytochrome c At12D13_RS02820 PF00376 MerR family regulatory protein At12D13_RS02820 PF09278 MerR, DNA binding At12D13_RS02830 PF02583 Metal-sensitive transcriptional repressor At12D13_RS02835 PF01545 Cation efflux family At12D13_RS02845 PF00571 CBS domain At12D13_RS02845 PF00005 ABC transporter At12D13_RS02850 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS02865 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain At12D13_RS02865 PF00326 Prolyl oligopeptidase family At12D13_RS02875 PF00701 Dihydrodipicolinate synthetase family At12D13_RS02885 PF12833 Helix-turn-helix domain At12D13_RS02885 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain At12D13_RS02885 PF02805 Metal binding domain of Ada At12D13_RS02885 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain At12D13_RS02895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At12D13_RS02915 PF03006 Haemolysin-III related At12D13_RS02925 PF01641 SelR domain At12D13_RS02930 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus At12D13_RS02930 PF00361 Proton-conducting membrane transporter At12D13_RS02930 PF13244 Domain of unknown function (DUF4040) At12D13_RS02935 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter At12D13_RS02940 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L At12D13_RS02945 PF00361 Proton-conducting membrane transporter At12D13_RS02950 PF01899 Na+/H+ ion antiporter subunit At12D13_RS02955 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) At12D13_RS02960 PF03334 Na+/H+ antiporter subunit At12D13_RS02965 PF05443 ROS/MUCR transcriptional regulator protein At12D13_RS02980 PF02657 Fe-S metabolism associated domain At12D13_RS02985 PF17264 Family of unknown function (DUF5330) At12D13_RS02990 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS02990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS03030 PF01810 LysE type translocator At12D13_RS03040 PF03466 LysR substrate binding domain At12D13_RS03040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS03050 PF00144 Beta-lactamase At12D13_RS03065 PF00912 Transglycosylase At12D13_RS03065 PF00905 Penicillin binding protein transpeptidase domain At12D13_RS03070 PF03692 Putative zinc- or iron-chelating domain At12D13_RS03075 PF00905 Penicillin binding protein transpeptidase domain At12D13_RS03085 PF00403 Heavy-metal-associated domain At12D13_RS03090 PF09278 MerR, DNA binding At12D13_RS03090 PF00376 MerR family regulatory protein At12D13_RS03105 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system At12D13_RS03125 PF00251 Glycosyl hydrolases family 32 N-terminal domain At12D13_RS03125 PF08244 Glycosyl hydrolases family 32 C terminal At12D13_RS03130 PF02696 Uncharacterized ACR, YdiU/UPF0061 family At12D13_RS03140 PF13404 AsnC-type helix-turn-helix domain At12D13_RS03140 PF01037 Lrp/AsnC ligand binding domain At12D13_RS03185 PF04860 Phage portal protein At12D13_RS03275 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS03275 PF00072 Response regulator receiver domain At12D13_RS03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS03295 PF03100 CcmE At12D13_RS03300 PF01578 Cytochrome C assembly protein At12D13_RS03300 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal At12D13_RS03305 PF03918 Cytochrome C biogenesis protein At12D13_RS03310 PF13180 PDZ domain At12D13_RS03315 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS03315 PF00072 Response regulator receiver domain At12D13_RS03320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS03320 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS03320 PF00672 HAMP domain At12D13_RS03325 PF06629 MltA-interacting protein MipA At12D13_RS03330 PF08335 GlnD PII-uridylyltransferase At12D13_RS03330 PF03710 Glutamate-ammonia ligase adenylyltransferase At12D13_RS03340 PF00989 PAS fold At12D13_RS03340 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS03340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS03350 PF17432 Domain of unknown function (DUF3458_C) ARM repeats At12D13_RS03350 PF01433 Peptidase family M1 domain At12D13_RS03350 PF11940 Domain of unknown function (DUF3458) Ig-like fold At12D13_RS03355 PF00892 EamA-like transporter family At12D13_RS03375 PF00012 Hsp70 protein At12D13_RS03380 PF00563 EAL domain At12D13_RS03380 PF03707 Bacterial signalling protein N terminal repeat At12D13_RS03380 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS03400 PF00440 Bacterial regulatory proteins, tetR family At12D13_RS03400 PF16925 Tetracyclin repressor-like, C-terminal domain At12D13_RS03415 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS03415 PF00107 Zinc-binding dehydrogenase At12D13_RS03420 PF01638 HxlR-like helix-turn-helix At12D13_RS03425 PF02673 Bacitracin resistance protein BacA At12D13_RS03430 PF00571 CBS domain At12D13_RS03430 PF01769 Divalent cation transporter At12D13_RS03430 PF03448 MgtE intracellular N domain At12D13_RS03435 PF07690 Major Facilitator Superfamily At12D13_RS03440 PF00781 Diacylglycerol kinase catalytic domain At12D13_RS03445 PF00202 Aminotransferase class-III At12D13_RS03460 PF09957 Bacterial antitoxin of type II TA system, VapB At12D13_RS03465 PF01048 Phosphorylase superfamily At12D13_RS03465 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus At12D13_RS03490 PF00155 Aminotransferase class I and II At12D13_RS03500 PF14759 Reductase C-terminal At12D13_RS03500 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_RS03505 PF03328 HpcH/HpaI aldolase/citrate lyase family At12D13_RS03530 PF02530 Porin subfamily At12D13_RS03535 PF02530 Porin subfamily At12D13_RS03540 PF14718 Soluble lytic murein transglycosylase L domain At12D13_RS03540 PF01464 Transglycosylase SLT domain At12D13_RS03550 PF00701 Dihydrodipicolinate synthetase family At12D13_RS03555 PF01668 SmpB protein At12D13_RS03565 PF00672 HAMP domain At12D13_RS03565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS03575 PF01192 RNA polymerase Rpb6 At12D13_RS03580 PF02824 TGS domain At12D13_RS03580 PF13291 ACT domain At12D13_RS03580 PF04607 Region found in RelA / SpoT proteins At12D13_RS03595 PF01648 4'-phosphopantetheinyl transferase superfamily At12D13_RS03600 PF10502 Signal peptidase, peptidase S26 At12D13_RS03605 PF14622 Ribonuclease-III-like At12D13_RS03605 PF00035 Double-stranded RNA binding motif At12D13_RS03610 PF07650 KH domain At12D13_RS03610 PF01926 50S ribosome-binding GTPase At12D13_RS03615 PF13545 Crp-like helix-turn-helix domain At12D13_RS03615 PF00027 Cyclic nucleotide-binding domain At12D13_RS03620 PF00072 Response regulator receiver domain At12D13_RS03625 PF11967 Recombination protein O N terminal At12D13_RS03625 PF02565 Recombination protein O C terminal At12D13_RS03630 PF07690 Major Facilitator Superfamily At12D13_RS03635 PF08241 Methyltransferase domain At12D13_RS03645 PF01966 HD domain At12D13_RS03655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At12D13_RS03665 PF00005 ABC transporter At12D13_RS03670 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS03675 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment At12D13_RS03680 PF05552 Conserved TM helix At12D13_RS03680 PF00924 Mechanosensitive ion channel At12D13_RS03690 PF01966 HD domain At12D13_RS03695 PF01571 Aminomethyltransferase folate-binding domain At12D13_RS03715 PF00293 NUDIX domain At12D13_RS03720 PF02694 Uncharacterised BCR, YnfA/UPF0060 family At12D13_RS03730 PF00072 Response regulator receiver domain At12D13_RS03730 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS03740 PF01066 CDP-alcohol phosphatidyltransferase At12D13_RS03745 PF02666 Phosphatidylserine decarboxylase At12D13_RS03750 PF00664 ABC transporter transmembrane region At12D13_RS03750 PF00005 ABC transporter At12D13_RS03755 PF01476 LysM domain At12D13_RS03760 PF03641 Possible lysine decarboxylase At12D13_RS03765 PF00905 Penicillin binding protein transpeptidase domain At12D13_RS03765 PF03717 Penicillin-binding Protein dimerisation domain At12D13_RS03770 PF00892 EamA-like transporter family At12D13_RS03775 PF00561 alpha/beta hydrolase fold At12D13_RS03790 PF04480 Protein of unknown function (DUF559) At12D13_RS03795 PF01406 tRNA synthetases class I (C) catalytic domain At12D13_RS03795 PF09190 DALR domain At12D13_RS03800 PF00106 short chain dehydrogenase At12D13_RS03805 PF13537 Glutamine amidotransferase domain At12D13_RS03805 PF00156 Phosphoribosyl transferase domain At12D13_RS03810 PF02674 Colicin V production protein At12D13_RS03815 PF18073 Rubredoxin metal binding domain At12D13_RS03815 PF06745 KaiC At12D13_RS03830 PF01168 Alanine racemase, N-terminal domain At12D13_RS03830 PF00842 Alanine racemase, C-terminal domain At12D13_RS03835 PF12833 Helix-turn-helix domain At12D13_RS03835 PF12852 Cupin At12D13_RS03840 PF03591 AzlC protein At12D13_RS03850 PF00664 ABC transporter transmembrane region At12D13_RS03850 PF00005 ABC transporter At12D13_RS03855 PF03796 DnaB-like helicase C terminal domain At12D13_RS03855 PF00772 DnaB-like helicase N terminal domain At12D13_RS03860 PF01047 MarR family At12D13_RS03870 PF13533 Biotin-lipoyl like At12D13_RS03880 PF03948 Ribosomal protein L9, C-terminal domain At12D13_RS03880 PF01281 Ribosomal protein L9, N-terminal domain At12D13_RS03890 PF01084 Ribosomal protein S18 At12D13_RS03895 PF01250 Ribosomal protein S6 At12D13_RS03905 PF00248 Aldo/keto reductase family At12D13_RS03910 PF00698 Acyl transferase domain At12D13_RS03920 PF00550 Phosphopantetheine attachment site At12D13_RS03925 PF02801 Beta-ketoacyl synthase, C-terminal domain At12D13_RS03925 PF00109 Beta-ketoacyl synthase, N-terminal domain At12D13_RS03935 PF02618 YceG-like family At12D13_RS03940 PF03755 YicC-like family, N-terminal region At12D13_RS03940 PF08340 Domain of unknown function (DUF1732) At12D13_RS03945 PF00625 Guanylate kinase At12D13_RS03955 PF00398 Ribosomal RNA adenine dimethylase At12D13_RS03960 PF04166 Pyridoxal phosphate biosynthetic protein PdxA At12D13_RS03970 PF04453 LPS transport system D At12D13_RS03970 PF03968 OstA-like protein At12D13_RS03985 PF00883 Cytosol aminopeptidase family, catalytic domain At12D13_RS03985 PF02789 Cytosol aminopeptidase family, N-terminal domain At12D13_RS03995 PF03707 Bacterial signalling protein N terminal repeat At12D13_RS03995 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS03995 PF00563 EAL domain At12D13_RS04000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS04005 PF03707 Bacterial signalling protein N terminal repeat At12D13_RS04005 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS04005 PF00563 EAL domain At12D13_RS04010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS04010 PF00989 PAS fold At12D13_RS04010 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS04015 PF00072 Response regulator receiver domain At12D13_RS04015 PF00196 Bacterial regulatory proteins, luxR family At12D13_RS04025 PF12848 ABC transporter At12D13_RS04025 PF00005 ABC transporter At12D13_RS04030 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS04030 PF17158 Membrane-associated sensor, integral membrane domain At12D13_RS04035 PF13417 Glutathione S-transferase, N-terminal domain At12D13_RS04040 PF00334 Nucleoside diphosphate kinase At12D13_RS04060 PF02391 MoaE protein At12D13_RS04065 PF02597 ThiS family At12D13_RS04070 PF01066 CDP-alcohol phosphatidyltransferase At12D13_RS04075 PF08459 UvrC Helix-hairpin-helix N-terminal At12D13_RS04075 PF02151 UvrB/uvrC motif At12D13_RS04075 PF01541 GIY-YIG catalytic domain At12D13_RS04085 PF13505 Outer membrane protein beta-barrel domain At12D13_RS04090 PF00043 Glutathione S-transferase, C-terminal domain At12D13_RS04090 PF13417 Glutathione S-transferase, N-terminal domain At12D13_RS04095 PF00445 Ribonuclease T2 family At12D13_RS04110 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ At12D13_RS04115 PF00384 Molybdopterin oxidoreductase At12D13_RS04115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At12D13_RS04115 PF01568 Molydopterin dinucleotide binding domain At12D13_RS04120 PF00293 NUDIX domain At12D13_RS04130 PF00551 Formyl transferase At12D13_RS04135 PF00586 AIR synthase related protein, N-terminal domain At12D13_RS04135 PF02769 AIR synthase related protein, C-terminal domain At12D13_RS04140 PF01594 AI-2E family transporter At12D13_RS04150 PF17941 Polyphosphate kinase C-terminal domain 1 At12D13_RS04150 PF13089 Polyphosphate kinase N-terminal domain At12D13_RS04150 PF02503 Polyphosphate kinase middle domain At12D13_RS04150 PF13090 Polyphosphate kinase C-terminal domain 2 At12D13_RS04155 PF02541 Ppx/GppA phosphatase family At12D13_RS04160 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_RS04180 PF00211 Adenylate and Guanylate cyclase catalytic domain At12D13_RS04190 PF01612 3'-5' exonuclease At12D13_RS04190 PF00570 HRDC domain At12D13_RS04195 PF07690 Major Facilitator Superfamily At12D13_RS04200 PF01336 OB-fold nucleic acid binding domain At12D13_RS04200 PF00152 tRNA synthetases class II (D, K and N) At12D13_RS04200 PF02938 GAD domain At12D13_RS04210 PF06123 Inner membrane protein CreD At12D13_RS04215 PF01740 STAS domain At12D13_RS04215 PF00916 Sulfate permease family At12D13_RS04225 PF03989 DNA gyrase C-terminal domain, beta-propeller At12D13_RS04225 PF00521 DNA gyrase/topoisomerase IV, subunit A At12D13_RS04230 PF04377 Arginine-tRNA-protein transferase, C terminus At12D13_RS04230 PF04376 Arginine-tRNA-protein transferase, N terminus At12D13_RS04240 PF00490 Delta-aminolevulinic acid dehydratase At12D13_RS04260 PF00464 Serine hydroxymethyltransferase At12D13_RS04265 PF03477 ATP cone domain At12D13_RS04270 PF01872 RibD C-terminal domain At12D13_RS04270 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region At12D13_RS04275 PF00677 Lumazine binding domain At12D13_RS04280 PF01810 LysE type translocator At12D13_RS04285 PF00885 6,7-dimethyl-8-ribityllumazine synthase At12D13_RS04290 PF01029 NusB family At12D13_RS04295 PF07690 Major Facilitator Superfamily At12D13_RS04300 PF03030 Inorganic H+ pyrophosphatase At12D13_RS04320 PF02504 Fatty acid synthesis protein At12D13_RS04325 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal At12D13_RS04325 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III At12D13_RS04330 PF00216 Bacterial DNA-binding protein At12D13_RS04335 PF13411 MerR HTH family regulatory protein At12D13_RS04350 PF00403 Heavy-metal-associated domain At12D13_RS04355 PF00175 Oxidoreductase NAD-binding domain At12D13_RS04355 PF00970 Oxidoreductase FAD-binding domain At12D13_RS04355 PF00111 2Fe-2S iron-sulfur cluster binding domain At12D13_RS04360 PF00376 MerR family regulatory protein At12D13_RS04360 PF09278 MerR, DNA binding At12D13_RS04365 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS04370 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS04370 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS04375 PF00005 ABC transporter At12D13_RS04375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS04380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS04380 PF00005 ABC transporter At12D13_RS04385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS04395 PF02386 Cation transport protein At12D13_RS04400 PF00291 Pyridoxal-phosphate dependent enzyme At12D13_RS04400 PF00585 C-terminal regulatory domain of Threonine dehydratase At12D13_RS04410 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS04410 PF00072 Response regulator receiver domain At12D13_RS04415 PF02525 Flavodoxin-like fold At12D13_RS04420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS04420 PF03466 LysR substrate binding domain At12D13_RS04425 PF02872 5'-nucleotidase, C-terminal domain At12D13_RS04425 PF00149 Calcineurin-like phosphoesterase At12D13_RS04450 PF00581 Rhodanese-like domain At12D13_RS04455 PF01411 tRNA synthetases class II (A) At12D13_RS04455 PF02272 DHHA1 domain At12D13_RS04455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain At12D13_RS04460 PF00291 Pyridoxal-phosphate dependent enzyme At12D13_RS04460 PF00571 CBS domain At12D13_RS04465 PF00875 DNA photolyase At12D13_RS04465 PF03441 FAD binding domain of DNA photolyase At12D13_RS04475 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain At12D13_RS04475 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain At12D13_RS04540 PF02796 Helix-turn-helix domain of resolvase At12D13_RS04540 PF00239 Resolvase, N terminal domain At12D13_RS04590 PF06055 Exopolysaccharide synthesis, ExoD At12D13_RS04640 PF02397 Bacterial sugar transferase At12D13_RS04645 PF00534 Glycosyl transferases group 1 At12D13_RS04670 PF02628 Cytochrome oxidase assembly protein At12D13_RS04675 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase At12D13_RS04680 PF01118 Semialdehyde dehydrogenase, NAD binding domain At12D13_RS04685 PF00491 Arginase family At12D13_RS04690 PF00380 Ribosomal protein S9/S16 At12D13_RS04695 PF00572 Ribosomal protein L13 At12D13_RS04710 PF13380 CoA binding domain At12D13_RS04715 PF01053 Cys/Met metabolism PLP-dependent enzyme At12D13_RS04740 PF00067 Cytochrome P450 At12D13_RS04745 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS04750 PF00574 Clp protease At12D13_RS04755 PF07724 AAA domain (Cdc48 subfamily) At12D13_RS04755 PF06689 ClpX C4-type zinc finger At12D13_RS04755 PF10431 C-terminal, D2-small domain, of ClpB protein At12D13_RS04765 PF02190 ATP-dependent protease La (LON) substrate-binding domain At12D13_RS04765 PF05362 Lon protease (S16) C-terminal proteolytic domain At12D13_RS04765 PF00004 ATPase family associated with various cellular activities (AAA) At12D13_RS04770 PF00216 Bacterial DNA-binding protein At12D13_RS04775 PF04166 Pyridoxal phosphate biosynthetic protein PdxA At12D13_RS04800 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 At12D13_RS04805 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit At12D13_RS04810 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit At12D13_RS04820 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit At12D13_RS04835 PF10531 SLBB domain At12D13_RS04835 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region At12D13_RS04835 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit At12D13_RS04840 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal At12D13_RS04840 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region At12D13_RS04840 PF00384 Molybdopterin oxidoreductase At12D13_RS04845 PF00146 NADH dehydrogenase At12D13_RS04850 PF12838 4Fe-4S dicluster domain At12D13_RS04855 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 At12D13_RS04860 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L At12D13_RS04865 PF00361 Proton-conducting membrane transporter At12D13_RS04865 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus At12D13_RS04870 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus At12D13_RS04870 PF00361 Proton-conducting membrane transporter At12D13_RS04875 PF00361 Proton-conducting membrane transporter At12D13_RS04880 PF08279 HTH domain At12D13_RS04880 PF02237 Biotin protein ligase C terminal domain At12D13_RS04880 PF03099 Biotin/lipoate A/B protein ligase family At12D13_RS04885 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain At12D13_RS04885 PF12706 Beta-lactamase superfamily domain At12D13_RS04885 PF17770 Ribonuclease J C-terminal domain At12D13_RS04900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) At12D13_RS04900 PF03129 Anticodon binding domain At12D13_RS04905 PF02687 FtsX-like permease family At12D13_RS04905 PF12704 MacB-like periplasmic core domain At12D13_RS04910 PF00005 ABC transporter At12D13_RS04920 PF07733 Bacterial DNA polymerase III alpha NTPase domain At12D13_RS04920 PF14579 Helix-hairpin-helix motif At12D13_RS04920 PF02811 PHP domain At12D13_RS04920 PF17657 Bacterial DNA polymerase III alpha subunit finger domain At12D13_RS04930 PF00817 impB/mucB/samB family At12D13_RS04930 PF11799 impB/mucB/samB family C-terminal domain At12D13_RS04940 PF00072 Response regulator receiver domain At12D13_RS04945 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS04945 PF00072 Response regulator receiver domain At12D13_RS04955 PF00471 Ribosomal protein L33 At12D13_RS04960 PF07690 Major Facilitator Superfamily At12D13_RS04975 PF08461 Ribonuclease R winged-helix domain At12D13_RS04975 PF08206 Ribonuclease B OB domain At12D13_RS04975 PF00773 RNB domain At12D13_RS04975 PF00575 S1 RNA binding domain At12D13_RS04975 PF17876 Cold shock domain At12D13_RS04980 PF01396 Topoisomerase DNA binding C4 zinc finger At12D13_RS04980 PF13368 Topoisomerase C-terminal repeat At12D13_RS04980 PF01751 Toprim domain At12D13_RS04980 PF01131 DNA topoisomerase At12D13_RS04990 PF02481 DNA recombination-mediator protein A At12D13_RS04990 PF17782 DprA winged helix domain At12D13_RS04995 PF02660 Glycerol-3-phosphate acyltransferase At12D13_RS05000 PF01979 Amidohydrolase family At12D13_RS05005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain At12D13_RS05005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain At12D13_RS05015 PF18158 Adaptive response protein AidB N-terminal domain At12D13_RS05015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At12D13_RS05015 PF02770 Acyl-CoA dehydrogenase, middle domain At12D13_RS05020 PF00583 Acetyltransferase (GNAT) family At12D13_RS05045 PF03652 Holliday junction resolvase At12D13_RS05055 PF02686 Glu-tRNAGln amidotransferase C subunit At12D13_RS05060 PF01425 Amidase At12D13_RS05065 PF00583 Acetyltransferase (GNAT) family At12D13_RS05065 PF13673 Acetyltransferase (GNAT) domain At12D13_RS05070 PF09857 Putative toxin of bacterial toxin-antitoxin pair At12D13_RS05085 PF02934 GatB/GatE catalytic domain At12D13_RS05085 PF02637 GatB domain At12D13_RS05095 PF00583 Acetyltransferase (GNAT) family At12D13_RS05110 PF03588 Leucyl/phenylalanyl-tRNA protein transferase At12D13_RS05115 PF02785 Biotin carboxylase C-terminal domain At12D13_RS05115 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At12D13_RS05115 PF00289 Biotin carboxylase, N-terminal domain At12D13_RS05120 PF00364 Biotin-requiring enzyme At12D13_RS05125 PF01220 Dehydroquinase class II At12D13_RS05130 PF13462 Thioredoxin At12D13_RS05130 PF06965 Na+/H+ antiporter 1 At12D13_RS05135 PF00155 Aminotransferase class I and II At12D13_RS05160 PF12111 Polyribonucleotide phosphorylase C terminal At12D13_RS05160 PF00575 S1 RNA binding domain At12D13_RS05160 PF10150 Ribonuclease E/G family At12D13_RS05170 PF01520 N-acetylmuramoyl-L-alanine amidase At12D13_RS05175 PF17092 Penicillin-binding protein OB-like domain At12D13_RS05175 PF00905 Penicillin binding protein transpeptidase domain At12D13_RS05175 PF00912 Transglycosylase At12D13_RS05195 PF01513 ATP-NAD kinase At12D13_RS05200 PF02567 Phenazine biosynthesis-like protein At12D13_RS05215 PF00111 2Fe-2S iron-sulfur cluster binding domain At12D13_RS05225 PF00809 Pterin binding enzyme At12D13_RS05230 PF02152 Dihydroneopterin aldolase At12D13_RS05235 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) At12D13_RS05245 PF05128 Domain of unknown function (DUF697) At12D13_RS05250 PF04317 YcjX-like family, DUF463 At12D13_RS05260 PF01258 Prokaryotic dksA/traR C4-type zinc finger At12D13_RS05275 PF00072 Response regulator receiver domain At12D13_RS05275 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS05275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS05275 PF13188 PAS domain At12D13_RS05275 PF08448 PAS fold At12D13_RS05280 PF02617 ATP-dependent Clp protease adaptor protein ClpS At12D13_RS05285 PF07724 AAA domain (Cdc48 subfamily) At12D13_RS05285 PF10431 C-terminal, D2-small domain, of ClpB protein At12D13_RS05285 PF02861 Clp amino terminal domain, pathogenicity island component At12D13_RS05285 PF17871 AAA lid domain At12D13_RS05285 PF00004 ATPase family associated with various cellular activities (AAA) At12D13_RS05300 PF03466 LysR substrate binding domain At12D13_RS05300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS05310 PF01230 HIT domain At12D13_RS05335 PF00318 Ribosomal protein S2 At12D13_RS05340 PF00889 Elongation factor TS At12D13_RS05345 PF00696 Amino acid kinase family At12D13_RS05350 PF01765 Ribosome recycling factor At12D13_RS05355 PF01255 Putative undecaprenyl diphosphate synthase At12D13_RS05365 PF02163 Peptidase family M50 At12D13_RS05365 PF17820 PDZ domain At12D13_RS05370 PF07244 Surface antigen variable number repeat At12D13_RS05370 PF01103 Surface antigen At12D13_RS05375 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_RS05375 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD At12D13_RS05380 PF07977 FabA-like domain At12D13_RS05385 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 At12D13_RS05385 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_RS05390 PF06230 LpxI C-terminal domain At12D13_RS05390 PF17930 LpxI N-terminal domain At12D13_RS05395 PF02684 Lipid-A-disaccharide synthetase At12D13_RS05400 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS05400 PF07729 FCD domain At12D13_RS05405 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_RS05410 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS05415 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS05420 PF00005 ABC transporter At12D13_RS05425 PF00285 Citrate synthase, C-terminal domain At12D13_RS05440 PF01726 LexA DNA binding domain At12D13_RS05440 PF00717 Peptidase S24-like At12D13_RS05445 PF00005 ABC transporter At12D13_RS05450 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS05455 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS05460 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_RS05465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_RS05465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_RS05470 PF00005 ABC transporter At12D13_RS05470 PF17912 MalK OB fold domain At12D13_RS05475 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS05480 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS05485 PF01547 Bacterial extracellular solute-binding protein At12D13_RS05495 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_RS05495 PF13378 Enolase C-terminal domain-like At12D13_RS05505 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS05505 PF00107 Zinc-binding dehydrogenase At12D13_RS05510 PF04115 Ureidoglycolate lyase At12D13_RS05515 PF00005 ABC transporter At12D13_RS05520 PF00005 ABC transporter At12D13_RS05520 PF12399 Branched-chain amino acid ATP-binding cassette transporter At12D13_RS05530 PF13458 Periplasmic binding protein At12D13_RS05535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_RS05535 PF02770 Acyl-CoA dehydrogenase, middle domain At12D13_RS05535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At12D13_RS05535 PF12806 Acetyl-CoA dehydrogenase C-terminal like At12D13_RS05540 PF00106 short chain dehydrogenase At12D13_RS05545 PF07993 Male sterility protein At12D13_RS05545 PF00550 Phosphopantetheine attachment site At12D13_RS05545 PF00501 AMP-binding enzyme At12D13_RS05550 PF00378 Enoyl-CoA hydratase/isomerase At12D13_RS05560 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS05560 PF07729 FCD domain At12D13_RS05565 PF01571 Aminomethyltransferase folate-binding domain At12D13_RS05585 PF00793 DAHP synthetase I family At12D13_RS05590 PF00113 Enolase, C-terminal TIM barrel domain At12D13_RS05590 PF03952 Enolase, N-terminal domain At12D13_RS05605 PF00676 Dehydrogenase E1 component At12D13_RS05610 PF00364 Biotin-requiring enzyme At12D13_RS05610 PF02779 Transketolase, pyrimidine binding domain At12D13_RS05610 PF02780 Transketolase, C-terminal domain At12D13_RS05620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) At12D13_RS05620 PF02817 e3 binding domain At12D13_RS05620 PF00364 Biotin-requiring enzyme At12D13_RS05630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At12D13_RS05630 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_RS05640 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family At12D13_RS05640 PF04055 Radical SAM superfamily At12D13_RS05645 PF00892 EamA-like transporter family At12D13_RS05670 PF03364 Polyketide cyclase / dehydrase and lipid transport At12D13_RS05675 PF02464 Competence-damaged protein At12D13_RS05680 PF02542 YgbB family At12D13_RS05680 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase At12D13_RS05685 PF01207 Dihydrouridine synthase (Dus) At12D13_RS05690 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS05690 PF00989 PAS fold At12D13_RS05690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS05695 PF00072 Response regulator receiver domain At12D13_RS05695 PF02954 Bacterial regulatory protein, Fis family At12D13_RS05695 PF00158 Sigma-54 interaction domain At12D13_RS05700 PF00989 PAS fold At12D13_RS05700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS05700 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS05700 PF00672 HAMP domain At12D13_RS05705 PF00158 Sigma-54 interaction domain At12D13_RS05705 PF00072 Response regulator receiver domain At12D13_RS05705 PF02954 Bacterial regulatory protein, Fis family At12D13_RS05710 PF02080 TrkA-C domain At12D13_RS05710 PF02254 TrkA-N domain At12D13_RS05715 PF17209 Hfq protein At12D13_RS05720 PF16360 GTP-binding GTPase Middle Region At12D13_RS05720 PF01926 50S ribosome-binding GTPase At12D13_RS05720 PF13167 GTP-binding GTPase N-terminal At12D13_RS05725 PF03819 MazG nucleotide pyrophosphohydrolase domain At12D13_RS05735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At12D13_RS05735 PF10414 Sirohaem synthase dimerisation region At12D13_RS05735 PF14824 Sirohaem biosynthesis protein central At12D13_RS05750 PF01795 MraW methylase family At12D13_RS05755 PF00175 Oxidoreductase NAD-binding domain At12D13_RS05755 PF00970 Oxidoreductase FAD-binding domain At12D13_RS05760 PF07690 Major Facilitator Superfamily At12D13_RS05775 PF02347 Glycine cleavage system P-protein At12D13_RS05780 PF01597 Glycine cleavage H-protein At12D13_RS05785 PF01571 Aminomethyltransferase folate-binding domain At12D13_RS05785 PF08669 Glycine cleavage T-protein C-terminal barrel domain At12D13_RS05810 PF02537 CrcB-like protein, Camphor Resistance (CrcB) At12D13_RS05815 PF01479 S4 domain At12D13_RS05815 PF00849 RNA pseudouridylate synthase At12D13_RS05820 PF13419 Haloacid dehalogenase-like hydrolase At12D13_RS05835 PF01042 Endoribonuclease L-PSP At12D13_RS05840 PF00756 Putative esterase At12D13_RS05850 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 At12D13_RS05860 PF10417 C-terminal domain of 1-Cys peroxiredoxin At12D13_RS05860 PF00578 AhpC/TSA family At12D13_RS05890 PF08281 Sigma-70, region 4 At12D13_RS05890 PF04542 Sigma-70 region 2 At12D13_RS05910 PF03358 NADPH-dependent FMN reductase At12D13_RS05915 PF03960 ArsC family At12D13_RS05935 PF00654 Voltage gated chloride channel At12D13_RS05940 PF03099 Biotin/lipoate A/B protein ligase family At12D13_RS05940 PF12706 Beta-lactamase superfamily domain At12D13_RS05945 PF01026 TatD related DNase At12D13_RS05950 PF09334 tRNA synthetases class I (M) At12D13_RS05950 PF08264 Anticodon-binding domain of tRNA At12D13_RS05955 PF09115 DNA polymerase III, delta subunit, C terminal At12D13_RS05960 PF02223 Thymidylate kinase At12D13_RS05965 PF00768 D-alanyl-D-alanine carboxypeptidase At12D13_RS05965 PF07943 Penicillin-binding protein 5, C-terminal domain At12D13_RS05970 PF05036 Sporulation related domain At12D13_RS05970 PF03330 Lytic transglycolase At12D13_RS06020 PF03989 DNA gyrase C-terminal domain, beta-propeller At12D13_RS06020 PF00521 DNA gyrase/topoisomerase IV, subunit A At12D13_RS06025 PF01914 MarC family integral membrane protein At12D13_RS06030 PF00571 CBS domain At12D13_RS06030 PF01743 Poly A polymerase head domain At12D13_RS06040 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH At12D13_RS06045 PF00436 Single-strand binding protein family At12D13_RS06050 PF17755 UvrA DNA-binding domain At12D13_RS06050 PF17760 UvrA interaction domain At12D13_RS06060 PF01207 Dihydrouridine synthase (Dus) At12D13_RS06065 PF01557 Fumarylacetoacetate (FAA) hydrolase family At12D13_RS06070 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_RS06080 PF00950 ABC 3 transport family At12D13_RS06085 PF00005 ABC transporter At12D13_RS06090 PF01297 Zinc-uptake complex component A periplasmic At12D13_RS06095 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS06105 PF00248 Aldo/keto reductase family At12D13_RS06115 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain At12D13_RS06115 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At12D13_RS06120 PF03597 Cytochrome oxidase maturation protein cbb3-type At12D13_RS06130 PF05751 FixH At12D13_RS06135 PF13746 4Fe-4S dicluster domain At12D13_RS06135 PF12801 4Fe-4S binding domain At12D13_RS06135 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase At12D13_RS06155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III At12D13_RS06155 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP At12D13_RS06170 PF00115 Cytochrome C and Quinol oxidase polypeptide I At12D13_RS06175 PF00916 Sulfate permease family At12D13_RS06175 PF01740 STAS domain At12D13_RS06185 PF00924 Mechanosensitive ion channel At12D13_RS06190 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase At12D13_RS06210 PF09278 MerR, DNA binding At12D13_RS06210 PF00376 MerR family regulatory protein At12D13_RS06215 PF03448 MgtE intracellular N domain At12D13_RS06215 PF01769 Divalent cation transporter At12D13_RS06215 PF00571 CBS domain At12D13_RS06220 PF00384 Molybdopterin oxidoreductase At12D13_RS06230 PF01327 Polypeptide deformylase At12D13_RS06260 PF03099 Biotin/lipoate A/B protein ligase family At12D13_RS06265 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS06265 PF00107 Zinc-binding dehydrogenase At12D13_RS06290 PF07549 SecD/SecF GG Motif At12D13_RS06290 PF02355 Protein export membrane protein At12D13_RS06295 PF02699 Preprotein translocase subunit At12D13_RS06315 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS06315 PF01262 Alanine dehydrogenase/PNT, C-terminal domain At12D13_RS06320 PF00440 Bacterial regulatory proteins, tetR family At12D13_RS06325 PF00067 Cytochrome P450 At12D13_RS06335 PF06426 Serine acetyltransferase, N-terminal At12D13_RS06335 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_RS06340 PF00561 alpha/beta hydrolase fold At12D13_RS06350 PF01494 FAD binding domain At12D13_RS06355 PF01053 Cys/Met metabolism PLP-dependent enzyme At12D13_RS06360 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_RS06365 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS06370 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS06375 PF00005 ABC transporter At12D13_RS06395 PF17768 RecJ OB domain At12D13_RS06395 PF02272 DHHA1 domain At12D13_RS06395 PF01368 DHH family At12D13_RS06405 PF03447 Homoserine dehydrogenase, NAD binding domain At12D13_RS06405 PF00742 Homoserine dehydrogenase At12D13_RS06405 PF01842 ACT domain At12D13_RS06410 PF00155 Aminotransferase class I and II At12D13_RS06415 PF01156 Inosine-uridine preferring nucleoside hydrolase At12D13_RS06420 PF01925 Sulfite exporter TauE/SafE At12D13_RS06435 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS06435 PF00107 Zinc-binding dehydrogenase At12D13_RS06440 PF00109 Beta-ketoacyl synthase, N-terminal domain At12D13_RS06440 PF02801 Beta-ketoacyl synthase, C-terminal domain At12D13_RS06450 PF07977 FabA-like domain At12D13_RS06455 PF00550 Phosphopantetheine attachment site At12D13_RS06460 PF04055 Radical SAM superfamily At12D13_RS06465 PF00027 Cyclic nucleotide-binding domain At12D13_RS06465 PF13545 Crp-like helix-turn-helix domain At12D13_RS06475 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus At12D13_RS06480 PF03749 Sugar fermentation stimulation protein RE domain At12D13_RS06480 PF17746 SfsA N-terminal OB domain At12D13_RS06485 PF00557 Metallopeptidase family M24 At12D13_RS06490 PF04002 RadC-like JAB domain At12D13_RS06505 PF01474 Class-II DAHP synthetase family At12D13_RS06510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At12D13_RS06510 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_RS06520 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) At12D13_RS06525 PF13419 Haloacid dehalogenase-like hydrolase At12D13_RS06535 PF10415 Fumarase C C-terminus At12D13_RS06535 PF00206 Lyase At12D13_RS06540 PF13472 GDSL-like Lipase/Acylhydrolase family At12D13_RS06540 PF07859 alpha/beta hydrolase fold At12D13_RS06545 PF06418 CTP synthase N-terminus At12D13_RS06545 PF00117 Glutamine amidotransferase class-I At12D13_RS06550 PF03840 Preprotein translocase SecG subunit At12D13_RS06555 PF00121 Triosephosphate isomerase At12D13_RS06565 PF00986 DNA gyrase B subunit, carboxyl terminus At12D13_RS06565 PF01751 Toprim domain At12D13_RS06565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS06565 PF00204 DNA gyrase B At12D13_RS06570 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_RS06575 PF00440 Bacterial regulatory proteins, tetR family At12D13_RS06575 PF16859 Tetracyclin repressor-like, C-terminal domain At12D13_RS06580 PF01209 ubiE/COQ5 methyltransferase family At12D13_RS06585 PF01370 NAD dependent epimerase/dehydratase family At12D13_RS06590 PF00574 Clp protease At12D13_RS06600 PF01022 Bacterial regulatory protein, arsR family At12D13_RS06605 PF13091 PLD-like domain At12D13_RS06610 PF00072 Response regulator receiver domain At12D13_RS06615 PF08669 Glycine cleavage T-protein C-terminal barrel domain At12D13_RS06615 PF01571 Aminomethyltransferase folate-binding domain At12D13_RS06615 PF01266 FAD dependent oxidoreductase At12D13_RS06615 PF16350 FAD dependent oxidoreductase central domain At12D13_RS06620 PF12794 Mechanosensitive ion channel inner membrane domain 1 At12D13_RS06620 PF12795 Mechanosensitive ion channel porin domain At12D13_RS06620 PF00924 Mechanosensitive ion channel At12D13_RS06690 PF00005 ABC transporter At12D13_RS06695 PF02405 Permease MlaE At12D13_RS06700 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_RS06700 PF13378 Enolase C-terminal domain-like At12D13_RS06715 PF03949 Malic enzyme, NAD binding domain At12D13_RS06715 PF00390 Malic enzyme, N-terminal domain At12D13_RS06715 PF01515 Phosphate acetyl/butaryl transferase At12D13_RS06725 PF00881 Nitroreductase family At12D13_RS06730 PF07676 WD40-like Beta Propeller Repeat At12D13_RS06735 PF00795 Carbon-nitrogen hydrolase At12D13_RS06735 PF02540 NAD synthase At12D13_RS06740 PF00884 Sulfatase At12D13_RS06755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At12D13_RS06755 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_RS06770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase At12D13_RS06770 PF05697 Bacterial trigger factor protein (TF) At12D13_RS06770 PF05698 Bacterial trigger factor protein (TF) C-terminus At12D13_RS06795 PF01134 Glucose inhibited division protein A At12D13_RS06800 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS06800 PF00107 Zinc-binding dehydrogenase At12D13_RS06810 PF00550 Phosphopantetheine attachment site At12D13_RS06815 PF00501 AMP-binding enzyme At12D13_RS06815 PF13193 AMP-binding enzyme C-terminal domain At12D13_RS06820 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain At12D13_RS06820 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At12D13_RS06825 PF00425 chorismate binding enzyme At12D13_RS06825 PF04715 Anthranilate synthase component I, N terminal region At12D13_RS06830 PF01702 Queuine tRNA-ribosyltransferase At12D13_RS06835 PF02547 Queuosine biosynthesis protein At12D13_RS06840 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD At12D13_RS06845 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD At12D13_RS06850 PF01467 Cytidylyltransferase-like At12D13_RS06875 PF00591 Glycosyl transferase family, a/b domain At12D13_RS06875 PF02885 Glycosyl transferase family, helical bundle domain At12D13_RS06880 PF00218 Indole-3-glycerol phosphate synthase At12D13_RS06885 PF01967 MoaC family At12D13_RS06890 PF00994 Probable molybdopterin binding domain At12D13_RS06890 PF03454 MoeA C-terminal region (domain IV) At12D13_RS06890 PF03453 MoeA N-terminal region (domain I and II) At12D13_RS06895 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS06895 PF17158 Membrane-associated sensor, integral membrane domain At12D13_RS06905 PF02254 TrkA-N domain At12D13_RS06905 PF00999 Sodium/hydrogen exchanger family At12D13_RS06915 PF06463 Molybdenum Cofactor Synthesis C At12D13_RS06915 PF04055 Radical SAM superfamily At12D13_RS06920 PF00892 EamA-like transporter family At12D13_RS06925 PF07690 Major Facilitator Superfamily At12D13_RS06930 PF12804 MobA-like NTP transferase domain At12D13_RS06935 PF03205 Molybdopterin guanine dinucleotide synthesis protein B At12D13_RS06940 PF01551 Peptidase family M23 At12D13_RS06950 PF01975 Survival protein SurE At12D13_RS06955 PF02403 Seryl-tRNA synthetase N-terminal domain At12D13_RS06955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) At12D13_RS06960 PF00902 Sec-independent protein translocase protein (TatC) At12D13_RS06965 PF02416 mttA/Hcf106 family At12D13_RS06970 PF02416 mttA/Hcf106 family At12D13_RS06975 PF04079 Segregation and condensation complex subunit ScpB At12D13_RS06980 PF02616 Segregation and condensation protein ScpA At12D13_RS06985 PF00933 Glycosyl hydrolase family 3 N terminal domain At12D13_RS06995 PF00750 tRNA synthetases class I (R) At12D13_RS06995 PF03485 Arginyl tRNA synthetase N terminal domain At12D13_RS06995 PF05746 DALR anticodon binding domain At12D13_RS07000 PF01966 HD domain At12D13_RS07000 PF13286 Phosphohydrolase-associated domain At12D13_RS07005 PF01521 Iron-sulphur cluster biosynthesis At12D13_RS07015 PF08238 Sel1 repeat At12D13_RS07035 PF08264 Anticodon-binding domain of tRNA At12D13_RS07035 PF10458 Valyl tRNA synthetase tRNA binding arm At12D13_RS07035 PF00133 tRNA synthetases class I (I, L, M and V) At12D13_RS07090 PF03358 NADPH-dependent FMN reductase At12D13_RS07095 PF18146 Damage-inducible protein CinA KH domain At12D13_RS07095 PF00994 Probable molybdopterin binding domain At12D13_RS07095 PF02464 Competence-damaged protein At12D13_RS07100 PF00582 Universal stress protein family At12D13_RS07105 PF00156 Phosphoribosyl transferase domain At12D13_RS07110 PF08471 Class II vitamin B12-dependent ribonucleotide reductase At12D13_RS07110 PF02867 Ribonucleotide reductase, barrel domain At12D13_RS07125 PF01566 Natural resistance-associated macrophage protein At12D13_RS07135 PF00005 ABC transporter At12D13_RS07135 PF00664 ABC transporter transmembrane region At12D13_RS07140 PF01594 AI-2E family transporter At12D13_RS07145 PF00583 Acetyltransferase (GNAT) family At12D13_RS07160 PF01613 Flavin reductase like domain At12D13_RS07175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain At12D13_RS07175 PF02824 TGS domain At12D13_RS07175 PF03129 Anticodon binding domain At12D13_RS07175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) At12D13_RS07185 PF01809 Putative membrane protein insertion efficiency factor At12D13_RS07195 PF01227 GTP cyclohydrolase I At12D13_RS07200 PF01502 Phosphoribosyl-AMP cyclohydrolase At12D13_RS07205 PF01734 Patatin-like phospholipase At12D13_RS07210 PF00571 CBS domain At12D13_RS07210 PF00478 IMP dehydrogenase / GMP reductase domain At12D13_RS07245 PF03313 Serine dehydratase alpha chain At12D13_RS07245 PF03315 Serine dehydratase beta chain At12D13_RS07280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS07280 PF03466 LysR substrate binding domain At12D13_RS07290 PF12833 Helix-turn-helix domain At12D13_RS07290 PF01965 DJ-1/PfpI family At12D13_RS07295 PF03853 YjeF-related protein N-terminus At12D13_RS07295 PF01256 Carbohydrate kinase At12D13_RS07300 PF00543 Nitrogen regulatory protein P-II At12D13_RS07305 PF03951 Glutamine synthetase, beta-Grasp domain At12D13_RS07305 PF00120 Glutamine synthetase, catalytic domain At12D13_RS07315 PF08755 Hemimethylated DNA-binding protein YccV like At12D13_RS07325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS07335 PF00892 EamA-like transporter family At12D13_RS07350 PF00270 DEAD/DEAH box helicase At12D13_RS07350 PF00271 Helicase conserved C-terminal domain At12D13_RS07350 PF03461 TRCF domain At12D13_RS07350 PF17757 UvrB interaction domain At12D13_RS07350 PF02559 CarD-like/TRCF domain At12D13_RS07360 PF17191 RecG wedge domain At12D13_RS07360 PF00271 Helicase conserved C-terminal domain At12D13_RS07360 PF00270 DEAD/DEAH box helicase At12D13_RS07370 PF05016 ParE toxin of type II toxin-antitoxin system, parDE At12D13_RS07375 PF01402 Ribbon-helix-helix protein, copG family At12D13_RS07390 PF01380 SIS domain At12D13_RS07395 PF14602 Hexapeptide repeat of succinyl-transferase At12D13_RS07395 PF12804 MobA-like NTP transferase domain At12D13_RS07395 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_RS07400 PF07729 FCD domain At12D13_RS07400 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS07405 PF02608 ABC transporter substrate-binding protein PnrA-like At12D13_RS07410 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS07415 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS07420 PF00005 ABC transporter At12D13_RS07430 PF01494 FAD binding domain At12D13_RS07435 PF03547 Membrane transport protein At12D13_RS07440 PF02683 Cytochrome C biogenesis protein transmembrane region At12D13_RS07480 PF00313 'Cold-shock' DNA-binding domain At12D13_RS07540 PF00561 alpha/beta hydrolase fold At12D13_RS07555 PF02687 FtsX-like permease family At12D13_RS07555 PF12704 MacB-like periplasmic core domain At12D13_RS07555 PF00005 ABC transporter At12D13_RS07560 PF00005 ABC transporter At12D13_RS07560 PF02687 FtsX-like permease family At12D13_RS07560 PF12704 MacB-like periplasmic core domain At12D13_RS07570 PF01521 Iron-sulphur cluster biosynthesis At12D13_RS07575 PF01883 Iron-sulfur cluster assembly protein At12D13_RS07580 PF00266 Aminotransferase class-V At12D13_RS07585 PF01458 Uncharacterized protein family (UPF0051) At12D13_RS07590 PF00005 ABC transporter At12D13_RS07600 PF01458 Uncharacterized protein family (UPF0051) At12D13_RS07605 PF00266 Aminotransferase class-V At12D13_RS07610 PF02129 X-Pro dipeptidyl-peptidase (S15 family) At12D13_RS07620 PF03702 Anhydro-N-acetylmuramic acid kinase At12D13_RS07625 PF00579 tRNA synthetases class I (W and Y) At12D13_RS07635 PF00578 AhpC/TSA family At12D13_RS07640 PF04305 Protein of unknown function (DUF455) At12D13_RS07645 PF01476 LysM domain At12D13_RS07645 PF01551 Peptidase family M23 At12D13_RS07645 PF08525 Opacity-associated protein A N-terminal motif At12D13_RS07650 PF00271 Helicase conserved C-terminal domain At12D13_RS07650 PF00270 DEAD/DEAH box helicase At12D13_RS07680 PF00834 Ribulose-phosphate 3 epimerase family At12D13_RS07690 PF10397 Adenylosuccinate lyase C-terminus At12D13_RS07690 PF00206 Lyase At12D13_RS07700 PF01259 SAICAR synthetase At12D13_RS07705 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase At12D13_RS07725 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS07725 PF00155 Aminotransferase class I and II At12D13_RS07735 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain At12D13_RS07735 PF02769 AIR synthase related protein, C-terminal domain At12D13_RS07735 PF00586 AIR synthase related protein, N-terminal domain At12D13_RS07755 PF00462 Glutaredoxin At12D13_RS07760 PF07690 Major Facilitator Superfamily At12D13_RS07765 PF00459 Inositol monophosphatase family At12D13_RS07770 PF00459 Inositol monophosphatase family At12D13_RS07775 PF01171 PP-loop family At12D13_RS07780 PF04960 Glutaminase At12D13_RS07785 PF00163 Ribosomal protein S4/S9 N-terminal domain At12D13_RS07785 PF01479 S4 domain At12D13_RS07790 PF03741 Integral membrane protein TerC family At12D13_RS07800 PF00892 EamA-like transporter family At12D13_RS07805 PF01810 LysE type translocator At12D13_RS07820 PF01177 Asp/Glu/Hydantoin racemase At12D13_RS07825 PF00588 SpoU rRNA Methylase family At12D13_RS07835 PF00180 Isocitrate/isopropylmalate dehydrogenase At12D13_RS07860 PF02272 DHHA1 domain At12D13_RS07860 PF01411 tRNA synthetases class II (A) At12D13_RS07860 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain At12D13_RS07865 PF00154 recA bacterial DNA recombination protein At12D13_RS07870 PF00294 pfkB family carbohydrate kinase At12D13_RS07875 PF04227 Indigoidine synthase A like protein At12D13_RS07880 PF00691 OmpA family At12D13_RS07880 PF01389 OmpA-like transmembrane domain At12D13_RS07890 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_RS07895 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS07900 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS07905 PF06233 Usg-like family At12D13_RS07910 PF08241 Methyltransferase domain At12D13_RS07915 PF09084 NMT1/THI5 like At12D13_RS07920 PF13404 AsnC-type helix-turn-helix domain At12D13_RS07920 PF01037 Lrp/AsnC ligand binding domain At12D13_RS07925 PF03167 Uracil DNA glycosylase superfamily At12D13_RS07935 PF00989 PAS fold At12D13_RS07935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS07935 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS07940 PF01219 Prokaryotic diacylglycerol kinase At12D13_RS07945 PF02277 Phosphoribosyltransferase At12D13_RS07950 PF02654 Cobalamin-5-phosphate synthase At12D13_RS07965 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase At12D13_RS07980 PF00005 ABC transporter At12D13_RS07985 PF13407 Periplasmic binding protein domain At12D13_RS07990 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS08000 PF00456 Transketolase, thiamine diphosphate binding domain At12D13_RS08005 PF02779 Transketolase, pyrimidine binding domain At12D13_RS08005 PF02780 Transketolase, C-terminal domain At12D13_RS08010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At12D13_RS08010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At12D13_RS08015 PF04198 Putative sugar-binding domain At12D13_RS08020 PF00106 short chain dehydrogenase At12D13_RS08025 PF01061 ABC-2 type transporter At12D13_RS08030 PF00005 ABC transporter At12D13_RS08035 PF01925 Sulfite exporter TauE/SafE At12D13_RS08055 PF08269 Cache domain At12D13_RS08055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS08065 PF12002 MgsA AAA+ ATPase C terminal At12D13_RS08065 PF00004 ATPase family associated with various cellular activities (AAA) At12D13_RS08065 PF16193 AAA C-terminal domain At12D13_RS08070 PF13180 PDZ domain At12D13_RS08070 PF00595 PDZ domain At12D13_RS08085 PF00920 Dehydratase family At12D13_RS08090 PF00174 Oxidoreductase molybdopterin binding domain At12D13_RS08095 PF01794 Ferric reductase like transmembrane component At12D13_RS08105 PF05675 Protein of unknown function (DUF817) At12D13_RS08110 PF01196 Ribosomal protein L17 At12D13_RS08115 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain At12D13_RS08115 PF01000 RNA polymerase Rpb3/RpoA insert domain At12D13_RS08115 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain At12D13_RS08120 PF00411 Ribosomal protein S11 At12D13_RS08125 PF00416 Ribosomal protein S13/S18 At12D13_RS08135 PF00344 SecY translocase At12D13_RS08140 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A At12D13_RS08145 PF00327 Ribosomal protein L30p/L7e At12D13_RS08150 PF00333 Ribosomal protein S5, N-terminal domain At12D13_RS08150 PF03719 Ribosomal protein S5, C-terminal domain At12D13_RS08155 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast At12D13_RS08160 PF00347 Ribosomal protein L6 At12D13_RS08165 PF00410 Ribosomal protein S8 At12D13_RS08170 PF00253 Ribosomal protein S14p/S29e At12D13_RS08175 PF00673 ribosomal L5P family C-terminus At12D13_RS08175 PF00281 Ribosomal protein L5 At12D13_RS08180 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 At12D13_RS08180 PF00467 KOW motif At12D13_RS08185 PF00238 Ribosomal protein L14p/L23e At12D13_RS08190 PF00366 Ribosomal protein S17 At12D13_RS08195 PF00831 Ribosomal L29 protein At12D13_RS08200 PF00252 Ribosomal protein L16p/L10e At12D13_RS08205 PF00189 Ribosomal protein S3, C-terminal domain At12D13_RS08205 PF07650 KH domain At12D13_RS08210 PF00237 Ribosomal protein L22p/L17e At12D13_RS08215 PF00203 Ribosomal protein S19 At12D13_RS08220 PF03947 Ribosomal Proteins L2, C-terminal domain At12D13_RS08220 PF00181 Ribosomal Proteins L2, RNA binding domain At12D13_RS08225 PF00276 Ribosomal protein L23 At12D13_RS08230 PF00573 Ribosomal protein L4/L1 family At12D13_RS08235 PF00297 Ribosomal protein L3 At12D13_RS08240 PF00338 Ribosomal protein S10p/S20e At12D13_RS08245 PF00009 Elongation factor Tu GTP binding domain At12D13_RS08245 PF03144 Elongation factor Tu domain 2 At12D13_RS08245 PF03143 Elongation factor Tu C-terminal domain At12D13_RS08250 PF00009 Elongation factor Tu GTP binding domain At12D13_RS08250 PF03144 Elongation factor Tu domain 2 At12D13_RS08250 PF14492 Elongation Factor G, domain II At12D13_RS08250 PF00679 Elongation factor G C-terminus At12D13_RS08250 PF03764 Elongation factor G, domain IV At12D13_RS08255 PF00177 Ribosomal protein S7p/S5e At12D13_RS08260 PF00164 Ribosomal protein S12/S23 At12D13_RS08285 PF04998 RNA polymerase Rpb1, domain 5 At12D13_RS08285 PF04997 RNA polymerase Rpb1, domain 1 At12D13_RS08285 PF05000 RNA polymerase Rpb1, domain 4 At12D13_RS08285 PF04983 RNA polymerase Rpb1, domain 3 At12D13_RS08285 PF00623 RNA polymerase Rpb1, domain 2 At12D13_RS08290 PF04565 RNA polymerase Rpb2, domain 3 At12D13_RS08290 PF00562 RNA polymerase Rpb2, domain 6 At12D13_RS08290 PF04561 RNA polymerase Rpb2, domain 2 At12D13_RS08290 PF10385 RNA polymerase beta subunit external 1 domain At12D13_RS08290 PF04560 RNA polymerase Rpb2, domain 7 At12D13_RS08290 PF04563 RNA polymerase beta subunit At12D13_RS08295 PF16320 Ribosomal protein L7/L12 dimerisation domain At12D13_RS08295 PF00542 Ribosomal protein L7/L12 C-terminal domain At12D13_RS08300 PF00466 Ribosomal protein L10 At12D13_RS08305 PF00687 Ribosomal protein L1p/L10e family At12D13_RS08310 PF00298 Ribosomal protein L11, RNA binding domain At12D13_RS08310 PF03946 Ribosomal protein L11, N-terminal domain At12D13_RS08315 PF00467 KOW motif At12D13_RS08315 PF02357 Transcription termination factor nusG At12D13_RS08320 PF00584 SecE/Sec61-gamma subunits of protein translocation complex At12D13_RS08330 PF08485 Polysaccharide biosynthesis protein C-terminal At12D13_RS08330 PF02719 Polysaccharide biosynthesis protein At12D13_RS08335 PF00009 Elongation factor Tu GTP binding domain At12D13_RS08335 PF03144 Elongation factor Tu domain 2 At12D13_RS08335 PF03143 Elongation factor Tu C-terminal domain At12D13_RS08340 PF03741 Integral membrane protein TerC family At12D13_RS08355 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme At12D13_RS08390 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_RS08390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At12D13_RS08415 PF04542 Sigma-70 region 2 At12D13_RS08415 PF04545 Sigma-70, region 4 At12D13_RS08425 PF00158 Sigma-54 interaction domain At12D13_RS08425 PF00072 Response regulator receiver domain At12D13_RS08425 PF02954 Bacterial regulatory protein, Fis family At12D13_RS08430 PF08769 Sporulation initiation factor Spo0A C terminal At12D13_RS08430 PF00072 Response regulator receiver domain At12D13_RS08435 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS08435 PF00072 Response regulator receiver domain At12D13_RS08435 PF01627 Hpt domain At12D13_RS08435 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_RS08435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS08440 PF00072 Response regulator receiver domain At12D13_RS08445 PF07536 HWE histidine kinase At12D13_RS08445 PF13426 PAS domain At12D13_RS08445 PF08447 PAS fold At12D13_RS08450 PF00072 Response regulator receiver domain At12D13_RS08455 PF00360 Phytochrome region At12D13_RS08455 PF08446 PAS fold At12D13_RS08455 PF01590 GAF domain At12D13_RS08455 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS08455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS08475 PF08032 RNA 2'-O ribose methyltransferase substrate binding At12D13_RS08475 PF00588 SpoU rRNA Methylase family At12D13_RS08480 PF03061 Thioesterase superfamily At12D13_RS08505 PF13460 NAD(P)H-binding At12D13_RS08510 PF01638 HxlR-like helix-turn-helix At12D13_RS08515 PF04851 Type III restriction enzyme, res subunit At12D13_RS08515 PF00271 Helicase conserved C-terminal domain At12D13_RS08515 PF17757 UvrB interaction domain At12D13_RS08515 PF12344 Ultra-violet resistance protein B At12D13_RS08515 PF02151 UvrB/uvrC motif At12D13_RS08540 PF00684 DnaJ central domain At12D13_RS08540 PF01556 DnaJ C terminal domain At12D13_RS08540 PF00226 DnaJ domain At12D13_RS08555 PF17151 Periplasmic sensor domain At12D13_RS08555 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS08565 PF08402 TOBE domain At12D13_RS08565 PF00005 ABC transporter At12D13_RS08575 PF01547 Bacterial extracellular solute-binding protein At12D13_RS08585 PF00155 Aminotransferase class I and II At12D13_RS08590 PF05025 RbsD / FucU transport protein family At12D13_RS08595 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system At12D13_RS08605 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain At12D13_RS08605 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain At12D13_RS08615 PF12833 Helix-turn-helix domain At12D13_RS08615 PF06719 AraC-type transcriptional regulator N-terminus At12D13_RS08620 PF00107 Zinc-binding dehydrogenase At12D13_RS08620 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS08625 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_RS08630 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ At12D13_RS08635 PF03472 Autoinducer binding domain At12D13_RS08635 PF00196 Bacterial regulatory proteins, luxR family At12D13_RS08640 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain At12D13_RS08640 PF14490 Helix-hairpin-helix containing domain At12D13_RS08640 PF13538 UvrD-like helicase C-terminal domain At12D13_RS08660 PF04542 Sigma-70 region 2 At12D13_RS08660 PF08281 Sigma-70, region 4 At12D13_RS08670 PF00248 Aldo/keto reductase family At12D13_RS08685 PF10369 Small subunit of acetolactate synthase At12D13_RS08690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At12D13_RS08690 PF00205 Thiamine pyrophosphate enzyme, central domain At12D13_RS08690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At12D13_RS08710 PF13302 Acetyltransferase (GNAT) domain At12D13_RS08720 PF13180 PDZ domain At12D13_RS08730 PF01145 SPFH domain / Band 7 family At12D13_RS08735 PF01145 SPFH domain / Band 7 family At12D13_RS08740 PF00186 Dihydrofolate reductase At12D13_RS08745 PF00303 Thymidylate synthase At12D13_RS08780 PF02913 FAD linked oxidases, C-terminal domain At12D13_RS08780 PF01565 FAD binding domain At12D13_RS08785 PF00873 AcrB/AcrD/AcrF family At12D13_RS08790 PF13533 Biotin-lipoyl like At12D13_RS08800 PF00580 UvrD/REP helicase N-terminal domain At12D13_RS08800 PF13361 UvrD-like helicase C-terminal domain At12D13_RS08810 PF13977 BetI-type transcriptional repressor, C-terminal At12D13_RS08810 PF00440 Bacterial regulatory proteins, tetR family At12D13_RS08815 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At12D13_RS08820 PF00561 alpha/beta hydrolase fold At12D13_RS08840 PF00857 Isochorismatase family At12D13_RS08860 PF00557 Metallopeptidase family M24 At12D13_RS08860 PF01321 Creatinase/Prolidase N-terminal domain At12D13_RS08875 PF02630 SCO1/SenC At12D13_RS08885 PF01584 CheW-like domain At12D13_RS08895 PF00929 Exonuclease At12D13_RS08900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS08900 PF03466 LysR substrate binding domain At12D13_RS08920 PF03119 NAD-dependent DNA ligase C4 zinc finger domain At12D13_RS08920 PF12826 Helix-hairpin-helix motif At12D13_RS08920 PF03120 NAD-dependent DNA ligase OB-fold domain At12D13_RS08920 PF01653 NAD-dependent DNA ligase adenylation domain At12D13_RS08920 PF00533 BRCA1 C Terminus (BRCT) domain At12D13_RS08925 PF02463 RecF/RecN/SMC N terminal domain At12D13_RS08930 PF13525 Outer membrane lipoprotein At12D13_RS08935 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase At12D13_RS08940 PF12327 FtsZ family, C-terminal domain At12D13_RS08940 PF00091 Tubulin/FtsZ family, GTPase domain At12D13_RS08945 PF02491 SHS2 domain inserted in FTSA At12D13_RS08950 PF08478 POTRA domain, FtsQ-type At12D13_RS08950 PF03799 Cell division protein FtsQ At12D13_RS08955 PF01820 D-ala D-ala ligase N-terminus At12D13_RS08955 PF07478 D-ala D-ala ligase C-terminus At12D13_RS08960 PF07690 Major Facilitator Superfamily At12D13_RS08960 PF00083 Sugar (and other) transporter At12D13_RS08965 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS08965 PF13188 PAS domain At12D13_RS08965 PF00563 EAL domain At12D13_RS08965 PF03707 Bacterial signalling protein N terminal repeat At12D13_RS08970 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain At12D13_RS08970 PF01565 FAD binding domain At12D13_RS08975 PF08245 Mur ligase middle domain At12D13_RS08975 PF01225 Mur ligase family, catalytic domain At12D13_RS08975 PF02875 Mur ligase family, glutamate ligase domain At12D13_RS08980 PF03033 Glycosyltransferase family 28 N-terminal domain At12D13_RS08980 PF04101 Glycosyltransferase family 28 C-terminal domain At12D13_RS08985 PF01098 Cell cycle protein At12D13_RS08990 PF08245 Mur ligase middle domain At12D13_RS08990 PF02875 Mur ligase family, glutamate ligase domain At12D13_RS08995 PF00953 Glycosyl transferase family 4 At12D13_RS08995 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 At12D13_RS09000 PF02875 Mur ligase family, glutamate ligase domain At12D13_RS09000 PF08245 Mur ligase middle domain At12D13_RS09000 PF01225 Mur ligase family, catalytic domain At12D13_RS09005 PF02875 Mur ligase family, glutamate ligase domain At12D13_RS09005 PF01225 Mur ligase family, catalytic domain At12D13_RS09005 PF08245 Mur ligase middle domain At12D13_RS09010 PF00905 Penicillin binding protein transpeptidase domain At12D13_RS09010 PF03717 Penicillin-binding Protein dimerisation domain At12D13_RS09020 PF01795 MraW methylase family At12D13_RS09025 PF02381 MraZ protein, putative antitoxin-like At12D13_RS09035 PF03994 Domain of Unknown Function (DUF350) At12D13_RS09045 PF03738 Glutathionylspermidine synthase preATP-grasp At12D13_RS09070 PF01510 N-acetylmuramoyl-L-alanine amidase At12D13_RS09075 PF05099 Tellurite resistance protein TerB At12D13_RS09075 PF00226 DnaJ domain At12D13_RS09080 PF00365 Phosphofructokinase At12D13_RS09100 PF13649 Methyltransferase domain At12D13_RS09105 PF01183 Glycosyl hydrolases family 25 At12D13_RS09115 PF02219 Methylenetetrahydrofolate reductase At12D13_RS09120 PF01209 ubiE/COQ5 methyltransferase family At12D13_RS09125 PF00005 ABC transporter At12D13_RS09125 PF12848 ABC transporter At12D13_RS09130 PF12146 Serine aminopeptidase, S33 At12D13_RS09135 PF02515 CoA-transferase family III At12D13_RS09140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At12D13_RS09140 PF00205 Thiamine pyrophosphate enzyme, central domain At12D13_RS09140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At12D13_RS09150 PF01042 Endoribonuclease L-PSP At12D13_RS09165 PF03734 L,D-transpeptidase catalytic domain At12D13_RS09165 PF01476 LysM domain At12D13_RS09170 PF07690 Major Facilitator Superfamily At12D13_RS09180 PF10609 NUBPL iron-transfer P-loop NTPase At12D13_RS09190 PF00465 Iron-containing alcohol dehydrogenase At12D13_RS09195 PF00171 Aldehyde dehydrogenase family At12D13_RS09210 PF03951 Glutamine synthetase, beta-Grasp domain At12D13_RS09210 PF00120 Glutamine synthetase, catalytic domain At12D13_RS09215 PF13520 Amino acid permease At12D13_RS09225 PF01418 Helix-turn-helix domain, rpiR family At12D13_RS09225 PF01380 SIS domain At12D13_RS09250 PF08402 TOBE domain At12D13_RS09250 PF00005 ABC transporter At12D13_RS09255 PF00107 Zinc-binding dehydrogenase At12D13_RS09255 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS09270 PF07690 Major Facilitator Superfamily At12D13_RS09275 PF02607 B12 binding domain At12D13_RS09275 PF02965 Vitamin B12 dependent methionine synthase, activation domain At12D13_RS09275 PF00809 Pterin binding enzyme At12D13_RS09275 PF02574 Homocysteine S-methyltransferase At12D13_RS09275 PF02310 B12 binding domain At12D13_RS09295 PF13505 Outer membrane protein beta-barrel domain At12D13_RS09415 PF04402 Protein of unknown function (DUF541) At12D13_RS09425 PF01894 Uncharacterised protein family UPF0047 At12D13_RS09430 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS09430 PF01590 GAF domain At12D13_RS09430 PF08446 PAS fold At12D13_RS09430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS09430 PF00360 Phytochrome region At12D13_RS09440 PF00140 Sigma-70 factor, region 1.2 At12D13_RS09440 PF04542 Sigma-70 region 2 At12D13_RS09440 PF04539 Sigma-70 region 3 At12D13_RS09440 PF04545 Sigma-70, region 4 At12D13_RS09440 PF04546 Sigma-70, non-essential region At12D13_RS09440 PF03979 Sigma-70 factor, region 1.1 At12D13_RS09445 PF01807 CHC2 zinc finger At12D13_RS09445 PF08278 DNA primase DnaG DnaB-binding At12D13_RS09445 PF10410 DnaB-helicase binding domain of primase At12D13_RS09445 PF08275 DNA primase catalytic core, N-terminal domain At12D13_RS09455 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain At12D13_RS09455 PF00117 Glutamine amidotransferase class-I At12D13_RS09460 PF01554 MatE At12D13_RS09465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS09465 PF00672 HAMP domain At12D13_RS09465 PF02743 Cache domain At12D13_RS09475 PF04228 Putative neutral zinc metallopeptidase At12D13_RS09490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At12D13_RS09490 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain At12D13_RS09490 PF02142 MGS-like domain At12D13_RS09500 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS09500 PF07694 5TMR of 5TMR-LYT At12D13_RS09515 PF03449 Transcription elongation factor, N-terminal At12D13_RS09515 PF01272 Transcription elongation factor, GreA/GreB, C-term At12D13_RS09520 PF00534 Glycosyl transferases group 1 At12D13_RS09525 PF01037 Lrp/AsnC ligand binding domain At12D13_RS09530 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_RS09535 PF03466 LysR substrate binding domain At12D13_RS09535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS09545 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At12D13_RS09560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS09560 PF03466 LysR substrate binding domain At12D13_RS09575 PF01699 Sodium/calcium exchanger protein At12D13_RS09580 PF00155 Aminotransferase class I and II At12D13_RS09585 PF00563 EAL domain At12D13_RS09585 PF05231 MASE1 At12D13_RS09605 PF00313 'Cold-shock' DNA-binding domain At12D13_RS09610 PF00753 Metallo-beta-lactamase superfamily At12D13_RS09625 PF12802 MarR family At12D13_RS09630 PF00072 Response regulator receiver domain At12D13_RS09630 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS09635 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS09635 PF00672 HAMP domain At12D13_RS09635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS09635 PF16527 Two-component sensor protein CpxA, periplasmic domain At12D13_RS09640 PF01588 Putative tRNA binding domain At12D13_RS09645 PF14748 Pyrroline-5-carboxylate reductase dimerisation At12D13_RS09645 PF03807 NADP oxidoreductase coenzyme F420-dependent At12D13_RS09660 PF01790 Prolipoprotein diacylglyceryl transferase At12D13_RS09670 PF02578 Multi-copper polyphenol oxidoreductase laccase At12D13_RS09685 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase At12D13_RS09685 PF14572 Phosphoribosyl synthetase-associated domain At12D13_RS09695 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase At12D13_RS09705 PF00535 Glycosyl transferase family 2 At12D13_RS09710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS09710 PF00672 HAMP domain At12D13_RS09715 PF00171 Aldehyde dehydrogenase family At12D13_RS09720 PF02954 Bacterial regulatory protein, Fis family At12D13_RS09725 PF13188 PAS domain At12D13_RS09725 PF03707 Bacterial signalling protein N terminal repeat At12D13_RS09725 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS09725 PF00563 EAL domain At12D13_RS09730 PF01386 Ribosomal L25p family At12D13_RS09730 PF14693 Ribosomal protein TL5, C-terminal domain At12D13_RS09735 PF08448 PAS fold At12D13_RS09735 PF08447 PAS fold At12D13_RS09735 PF00563 EAL domain At12D13_RS09735 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS09745 PF01195 Peptidyl-tRNA hydrolase At12D13_RS09755 PF02617 ATP-dependent Clp protease adaptor protein ClpS At12D13_RS09760 PF06071 Protein of unknown function (DUF933) At12D13_RS09760 PF01926 50S ribosome-binding GTPase At12D13_RS09775 PF00156 Phosphoribosyl transferase domain At12D13_RS09780 PF02167 Cytochrome C1 family At12D13_RS09780 PF00032 Cytochrome b(C-terminal)/b6/petD At12D13_RS09780 PF00033 Cytochrome b/b6/petB At12D13_RS09785 PF00032 Cytochrome b(C-terminal)/b6/petD At12D13_RS09785 PF00033 Cytochrome b/b6/petB At12D13_RS09790 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal At12D13_RS09790 PF00355 Rieske [2Fe-2S] domain At12D13_RS09800 PF00664 ABC transporter transmembrane region At12D13_RS09800 PF00005 ABC transporter At12D13_RS09805 PF00005 ABC transporter At12D13_RS09805 PF00664 ABC transporter transmembrane region At12D13_RS09810 PF00149 Calcineurin-like phosphoesterase At12D13_RS09815 PF00588 SpoU rRNA Methylase family At12D13_RS09820 PF02690 Na+/Pi-cotransporter At12D13_RS09830 PF01218 Coproporphyrinogen III oxidase At12D13_RS09845 PF01743 Poly A polymerase head domain At12D13_RS09845 PF13735 tRNA nucleotidyltransferase domain 2 putative At12D13_RS09845 PF12627 Probable RNA and SrmB- binding site of polymerase A At12D13_RS09850 PF00293 NUDIX domain At12D13_RS09860 PF17863 AAA lid domain At12D13_RS09860 PF07726 ATPase family associated with various cellular activities (AAA) At12D13_RS09880 PF00583 Acetyltransferase (GNAT) family At12D13_RS09885 PF07690 Major Facilitator Superfamily At12D13_RS09895 PF13409 Glutathione S-transferase, N-terminal domain At12D13_RS09900 PF00293 NUDIX domain At12D13_RS09900 PF13344 Haloacid dehalogenase-like hydrolase At12D13_RS09915 PF00682 HMGL-like At12D13_RS09915 PF08502 LeuA allosteric (dimerisation) domain At12D13_RS09920 PF03594 Benzoate membrane transport protein At12D13_RS09935 PF08281 Sigma-70, region 4 At12D13_RS09935 PF04542 Sigma-70 region 2 At12D13_RS09945 PF00574 Clp protease At12D13_RS09950 PF04955 HupE / UreJ protein At12D13_RS09960 PF14489 QueF-like protein At12D13_RS09965 PF01545 Cation efflux family At12D13_RS09965 PF16916 Dimerisation domain of Zinc Transporter At12D13_RS09975 PF13458 Periplasmic binding protein At12D13_RS09985 PF01022 Bacterial regulatory protein, arsR family At12D13_RS09990 PF00571 CBS domain At12D13_RS09990 PF00005 ABC transporter At12D13_RS09995 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS10000 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At12D13_RS10005 PF00265 Thymidine kinase At12D13_RS10010 PF00127 Copper binding proteins, plastocyanin/azurin family At12D13_RS10020 PF00196 Bacterial regulatory proteins, luxR family At12D13_RS10020 PF03472 Autoinducer binding domain At12D13_RS10025 PF03350 Uncharacterized protein family, UPF0114 At12D13_RS10030 PF07715 TonB-dependent Receptor Plug Domain At12D13_RS10030 PF04886 PT repeat At12D13_RS10030 PF00593 TonB dependent receptor At12D13_RS10040 PF04715 Anthranilate synthase component I, N terminal region At12D13_RS10040 PF00425 chorismate binding enzyme At12D13_RS10040 PF00117 Glutamine amidotransferase class-I At12D13_RS10050 PF01966 HD domain At12D13_RS10050 PF11871 Domain of unknown function (DUF3391) At12D13_RS10055 PF13382 Adenine deaminase C-terminal domain At12D13_RS10055 PF01979 Amidohydrolase family At12D13_RS10065 PF00583 Acetyltransferase (GNAT) family At12D13_RS10070 PF00128 Alpha amylase, catalytic domain At12D13_RS10075 PF00294 pfkB family carbohydrate kinase At12D13_RS10095 PF01926 50S ribosome-binding GTPase At12D13_RS10095 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal At12D13_RS10115 PF05992 SbmA/BacA-like family At12D13_RS10125 PF00557 Metallopeptidase family M24 At12D13_RS10145 PF01799 [2Fe-2S] binding domain At12D13_RS10145 PF00111 2Fe-2S iron-sulfur cluster binding domain At12D13_RS10150 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase At12D13_RS10150 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain At12D13_RS10160 PF03466 LysR substrate binding domain At12D13_RS10160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS10175 PF01979 Amidohydrolase family At12D13_RS10190 PF01070 FMN-dependent dehydrogenase At12D13_RS10195 PF00893 Small Multidrug Resistance protein At12D13_RS10200 PF00440 Bacterial regulatory proteins, tetR family At12D13_RS10200 PF17932 Tetracyclin repressor-like, C-terminal domain At12D13_RS10205 PF00768 D-alanyl-D-alanine carboxypeptidase At12D13_RS10205 PF07943 Penicillin-binding protein 5, C-terminal domain At12D13_RS10215 PF00576 HIUase/Transthyretin family At12D13_RS10220 PF04115 Ureidoglycolate lyase At12D13_RS10235 PF09349 OHCU decarboxylase At12D13_RS10235 PF01014 Uricase At12D13_RS10245 PF06299 Protein of unknown function (DUF1045) At12D13_RS10250 PF01266 FAD dependent oxidoreductase At12D13_RS10255 PF05430 S-adenosyl-L-methionine-dependent methyltransferase At12D13_RS10255 PF01266 FAD dependent oxidoreductase At12D13_RS10260 PF00672 HAMP domain At12D13_RS10260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS10260 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS10260 PF01627 Hpt domain At12D13_RS10260 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) At12D13_RS10260 PF00072 Response regulator receiver domain At12D13_RS10265 PF00271 Helicase conserved C-terminal domain At12D13_RS10265 PF00270 DEAD/DEAH box helicase At12D13_RS10270 PF00892 EamA-like transporter family At12D13_RS10275 PF07681 DoxX At12D13_RS10280 PF03734 L,D-transpeptidase catalytic domain At12D13_RS10280 PF01476 LysM domain At12D13_RS10290 PF14403 Circularly permuted ATP-grasp type 2 At12D13_RS10300 PF01841 Transglutaminase-like superfamily At12D13_RS10300 PF08379 Bacterial transglutaminase-like N-terminal region At12D13_RS10315 PF00583 Acetyltransferase (GNAT) family At12D13_RS10330 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS10335 PF00005 ABC transporter At12D13_RS10340 PF13407 Periplasmic binding protein domain At12D13_RS10350 PF03466 LysR substrate binding domain At12D13_RS10350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS10385 PF01757 Acyltransferase family At12D13_RS10395 PF00672 HAMP domain At12D13_RS10395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS10400 PF07690 Major Facilitator Superfamily At12D13_RS10405 PF02574 Homocysteine S-methyltransferase At12D13_RS10405 PF02219 Methylenetetrahydrofolate reductase At12D13_RS10410 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS10415 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS10420 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_RS10425 PF00005 ABC transporter At12D13_RS10450 PF00331 Glycosyl hydrolase family 10 At12D13_RS10455 PF00535 Glycosyl transferase family 2 At12D13_RS10470 PF03808 Glycosyl transferase WecB/TagA/CpsF family At12D13_RS10490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain At12D13_RS10490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I At12D13_RS10490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II At12D13_RS10490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III At12D13_RS10495 PF01152 Bacterial-like globin At12D13_RS10515 PF00440 Bacterial regulatory proteins, tetR family At12D13_RS10515 PF08362 YcdC-like protein, C-terminal region At12D13_RS10520 PF01546 Peptidase family M20/M25/M40 At12D13_RS10520 PF07687 Peptidase dimerisation domain At12D13_RS10525 PF01979 Amidohydrolase family At12D13_RS10530 PF00293 NUDIX domain At12D13_RS10535 PF00005 ABC transporter At12D13_RS10545 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS10550 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS10570 PF00873 AcrB/AcrD/AcrF family At12D13_RS10580 PF12706 Beta-lactamase superfamily domain At12D13_RS10580 PF00753 Metallo-beta-lactamase superfamily At12D13_RS10585 PF02492 CobW/HypB/UreG, nucleotide-binding domain At12D13_RS10595 PF01730 UreF At12D13_RS10600 PF02814 UreE urease accessory protein, N-terminal domain At12D13_RS10600 PF05194 UreE urease accessory protein, C-terminal domain At12D13_RS10605 PF08534 Redoxin At12D13_RS10615 PF00449 Urease alpha-subunit, N-terminal domain At12D13_RS10615 PF01979 Amidohydrolase family At12D13_RS10625 PF07007 Lysozyme inhibitor LprI At12D13_RS10635 PF00699 Urease beta subunit At12D13_RS10640 PF06906 Protein of unknown function (DUF1272) At12D13_RS10645 PF00547 Urease, gamma subunit At12D13_RS10650 PF01774 UreD urease accessory protein At12D13_RS10660 PF00005 ABC transporter At12D13_RS10665 PF12399 Branched-chain amino acid ATP-binding cassette transporter At12D13_RS10665 PF00005 ABC transporter At12D13_RS10675 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS10685 PF10931 Protein of unknown function (DUF2735) At12D13_RS10690 PF00120 Glutamine synthetase, catalytic domain At12D13_RS10690 PF03951 Glutamine synthetase, beta-Grasp domain At12D13_RS10695 PF00106 short chain dehydrogenase At12D13_RS10700 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS10700 PF00072 Response regulator receiver domain At12D13_RS10700 PF01627 Hpt domain At12D13_RS10700 PF18415 Histidine kinase receptor ArcB trans-membrane domain At12D13_RS10700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS10700 PF00989 PAS fold At12D13_RS10705 PF00072 Response regulator receiver domain At12D13_RS10715 PF01522 Polysaccharide deacetylase At12D13_RS10720 PF13458 Periplasmic binding protein At12D13_RS10730 PF00005 ABC transporter At12D13_RS10735 PF00005 ABC transporter At12D13_RS10735 PF12399 Branched-chain amino acid ATP-binding cassette transporter At12D13_RS10740 PF11862 Domain of unknown function (DUF3382) At12D13_RS10740 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS10745 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS10750 PF00459 Inositol monophosphatase family At12D13_RS10780 PF00072 Response regulator receiver domain At12D13_RS10780 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS10800 PF10090 Histidine phosphotransferase C-terminal domain At12D13_RS10820 PF00588 SpoU rRNA Methylase family At12D13_RS10830 PF00849 RNA pseudouridylate synthase At12D13_RS10840 PF04545 Sigma-70, region 4 At12D13_RS10840 PF04542 Sigma-70 region 2 At12D13_RS10840 PF00140 Sigma-70 factor, region 1.2 At12D13_RS10855 PF00709 Adenylosuccinate synthetase At12D13_RS10885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At12D13_RS10895 PF03167 Uracil DNA glycosylase superfamily At12D13_RS10900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At12D13_RS10905 PF04304 Protein of unknown function (DUF454) At12D13_RS10910 PF00005 ABC transporter At12D13_RS10915 PF01032 FecCD transport family At12D13_RS10920 PF01497 Periplasmic binding protein At12D13_RS10930 PF06228 Haem utilisation ChuX/HutX At12D13_RS10945 PF00551 Formyl transferase At12D13_RS10950 PF00672 HAMP domain At12D13_RS10950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS10950 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS10955 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS10955 PF00072 Response regulator receiver domain At12D13_RS10965 PF03401 Tripartite tricarboxylate transporter family receptor At12D13_RS10975 PF01970 Tripartite tricarboxylate transporter TctA family At12D13_RS10990 PF01032 FecCD transport family At12D13_RS10995 PF01032 FecCD transport family At12D13_RS11000 PF00005 ABC transporter At12D13_RS11005 PF00210 Ferritin-like domain At12D13_RS11020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS11020 PF03466 LysR substrate binding domain At12D13_RS11025 PF07859 alpha/beta hydrolase fold At12D13_RS11030 PF13533 Biotin-lipoyl like At12D13_RS11035 PF00873 AcrB/AcrD/AcrF family At12D13_RS11050 PF13091 PLD-like domain At12D13_RS11050 PF13396 Phospholipase_D-nuclease N-terminal At12D13_RS11055 PF08543 Phosphomethylpyrimidine kinase At12D13_RS11060 PF00484 Carbonic anhydrase At12D13_RS11070 PF01118 Semialdehyde dehydrogenase, NAD binding domain At12D13_RS11070 PF02774 Semialdehyde dehydrogenase, dimerisation domain At12D13_RS11080 PF00083 Sugar (and other) transporter At12D13_RS11085 PF01262 Alanine dehydrogenase/PNT, C-terminal domain At12D13_RS11085 PF05222 Alanine dehydrogenase/PNT, N-terminal domain At12D13_RS11085 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch At12D13_RS11090 PF02233 NAD(P) transhydrogenase beta subunit At12D13_RS11095 PF01613 Flavin reductase like domain At12D13_RS11100 PF00881 Nitroreductase family At12D13_RS11105 PF00561 alpha/beta hydrolase fold At12D13_RS11110 PF01042 Endoribonuclease L-PSP At12D13_RS11115 PF00857 Isochorismatase family At12D13_RS11120 PF00296 Luciferase-like monooxygenase At12D13_RS11125 PF01126 Heme oxygenase At12D13_RS11130 PF00701 Dihydrodipicolinate synthetase family At12D13_RS11135 PF07729 FCD domain At12D13_RS11135 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS11140 PF01547 Bacterial extracellular solute-binding protein At12D13_RS11145 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS11150 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS11155 PF03459 TOBE domain At12D13_RS11155 PF17912 MalK OB fold domain At12D13_RS11155 PF00005 ABC transporter At12D13_RS11160 PF00294 pfkB family carbohydrate kinase At12D13_RS11165 PF03576 Peptidase family S58 At12D13_RS11170 PF01063 Amino-transferase class IV At12D13_RS11175 PF03466 LysR substrate binding domain At12D13_RS11175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS11185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS11185 PF00005 ABC transporter At12D13_RS11190 PF00005 ABC transporter At12D13_RS11190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS11195 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS11195 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS11200 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS11205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS11210 PF01244 Membrane dipeptidase (Peptidase family M19) At12D13_RS11220 PF03706 Lysylphosphatidylglycerol synthase TM region At12D13_RS11220 PF09924 Uncharacterised conserved protein (DUF2156) At12D13_RS11240 PF07690 Major Facilitator Superfamily At12D13_RS11250 PF04444 Catechol dioxygenase N terminus At12D13_RS11250 PF00775 Dioxygenase At12D13_RS11255 PF00465 Iron-containing alcohol dehydrogenase At12D13_RS11260 PF04909 Amidohydrolase At12D13_RS11265 PF08028 Acyl-CoA dehydrogenase, C-terminal domain At12D13_RS11265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_RS11270 PF01613 Flavin reductase like domain At12D13_RS11290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS11290 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS11295 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS11295 PF00072 Response regulator receiver domain At12D13_RS11305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At12D13_RS11350 PF01259 SAICAR synthetase At12D13_RS11360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At12D13_RS11360 PF00529 HlyD membrane-fusion protein of T1SS At12D13_RS11365 PF00873 AcrB/AcrD/AcrF family At12D13_RS11370 PF02321 Outer membrane efflux protein At12D13_RS11375 PF09285 Elongation factor P, C-terminal At12D13_RS11375 PF01132 Elongation factor P (EF-P) OB domain At12D13_RS11375 PF08207 Elongation factor P (EF-P) KOW-like domain At12D13_RS11380 PF00152 tRNA synthetases class II (D, K and N) At12D13_RS11385 PF04055 Radical SAM superfamily At12D13_RS11385 PF12544 Lysine-2,3-aminomutase At12D13_RS11400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS11400 PF03466 LysR substrate binding domain At12D13_RS11405 PF01266 FAD dependent oxidoreductase At12D13_RS11415 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS11420 PF00005 ABC transporter At12D13_RS11420 PF03459 TOBE domain At12D13_RS11430 PF03576 Peptidase family S58 At12D13_RS11435 PF05690 Thiazole biosynthesis protein ThiG At12D13_RS11445 PF01266 FAD dependent oxidoreductase At12D13_RS11450 PF13667 ThiC-associated domain At12D13_RS11450 PF01964 Radical SAM ThiC family At12D13_RS11455 PF00550 Phosphopantetheine attachment site At12D13_RS11485 PF00005 ABC transporter At12D13_RS11485 PF00664 ABC transporter transmembrane region At12D13_RS11490 PF13545 Crp-like helix-turn-helix domain At12D13_RS11490 PF00027 Cyclic nucleotide-binding domain At12D13_RS11500 PF00211 Adenylate and Guanylate cyclase catalytic domain At12D13_RS11500 PF00672 HAMP domain At12D13_RS11510 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain At12D13_RS11510 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain At12D13_RS11510 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain At12D13_RS11515 PF00534 Glycosyl transferases group 1 At12D13_RS11515 PF13439 Glycosyltransferase Family 4 At12D13_RS11530 PF00005 ABC transporter At12D13_RS11530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS11535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS11540 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS11545 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS11545 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS11555 PF00534 Glycosyl transferases group 1 At12D13_RS11555 PF13439 Glycosyltransferase Family 4 At12D13_RS11560 PF03033 Glycosyltransferase family 28 N-terminal domain At12D13_RS11560 PF04101 Glycosyltransferase family 28 C-terminal domain At12D13_RS11565 PF03932 CutC family At12D13_RS11580 PF02838 Glycosyl hydrolase family 20, domain 2 At12D13_RS11580 PF00728 Glycosyl hydrolase family 20, catalytic domain At12D13_RS11590 PF01380 SIS domain At12D13_RS11590 PF01418 Helix-turn-helix domain, rpiR family At12D13_RS11600 PF00005 ABC transporter At12D13_RS11600 PF17912 MalK OB fold domain At12D13_RS11605 PF01547 Bacterial extracellular solute-binding protein At12D13_RS11610 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS11615 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS11630 PF07702 UTRA domain At12D13_RS11630 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS11635 PF01380 SIS domain At12D13_RS11640 PF01979 Amidohydrolase family At12D13_RS11645 PF00480 ROK family At12D13_RS11650 PF01494 FAD binding domain At12D13_RS11655 PF01569 PAP2 superfamily At12D13_RS11660 PF13288 DXP reductoisomerase C-terminal domain At12D13_RS11660 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase At12D13_RS11660 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain At12D13_RS11665 PF00155 Aminotransferase class I and II At12D13_RS11675 PF01103 Surface antigen At12D13_RS11675 PF17243 POTRA domain TamA domain 1 At12D13_RS11675 PF07244 Surface antigen variable number repeat At12D13_RS11685 PF01584 CheW-like domain At12D13_RS11690 PF08447 PAS fold At12D13_RS11690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS11690 PF13426 PAS domain At12D13_RS11695 PF02634 FdhD/NarQ family At12D13_RS11705 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain At12D13_RS11710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At12D13_RS11710 PF02874 ATP synthase alpha/beta family, beta-barrel domain At12D13_RS11715 PF00231 ATP synthase At12D13_RS11720 PF02874 ATP synthase alpha/beta family, beta-barrel domain At12D13_RS11720 PF00306 ATP synthase alpha/beta chain, C terminal domain At12D13_RS11720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At12D13_RS11725 PF00213 ATP synthase delta (OSCP) subunit At12D13_RS11735 PF18319 PriA DNA helicase Cys-rich region (CRR) domain At12D13_RS11735 PF18074 Primosomal protein N C-terminal domain At12D13_RS11735 PF17764 3′ DNA-binding domain (3′BD) At12D13_RS11735 PF00270 DEAD/DEAH box helicase At12D13_RS11740 PF00589 Phage integrase family At12D13_RS11740 PF02899 Phage integrase, N-terminal SAM-like domain At12D13_RS11760 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_RS11760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At12D13_RS11765 PF01810 LysE type translocator At12D13_RS11775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) At12D13_RS11775 PF00364 Biotin-requiring enzyme At12D13_RS11775 PF02817 e3 binding domain At12D13_RS11780 PF16078 2-oxoglutarate dehydrogenase N-terminus At12D13_RS11780 PF00676 Dehydrogenase E1 component At12D13_RS11780 PF16870 2-oxoglutarate dehydrogenase C-terminal At12D13_RS11780 PF02779 Transketolase, pyrimidine binding domain At12D13_RS11785 PF02629 CoA binding domain At12D13_RS11785 PF00549 CoA-ligase At12D13_RS11790 PF00549 CoA-ligase At12D13_RS11790 PF08442 ATP-grasp domain At12D13_RS11795 PF00056 lactate/malate dehydrogenase, NAD binding domain At12D13_RS11795 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain At12D13_RS11800 PF03969 AFG1-like ATPase At12D13_RS11805 PF02974 Protease inhibitor Inh At12D13_RS11810 PF13237 4Fe-4S dicluster domain At12D13_RS11810 PF13085 2Fe-2S iron-sulfur cluster binding domain At12D13_RS11815 PF00890 FAD binding domain At12D13_RS11815 PF02910 Fumarate reductase flavoprotein C-term At12D13_RS11825 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit At12D13_RS11850 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus At12D13_RS11850 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus At12D13_RS11855 PF00814 Glycoprotease family At12D13_RS11860 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain At12D13_RS11860 PF03900 Porphobilinogen deaminase, C-terminal domain At12D13_RS11885 PF00117 Glutamine amidotransferase class-I At12D13_RS11895 PF02594 Uncharacterised ACR, YggU family COG1872 At12D13_RS11900 PF00719 Inorganic pyrophosphatase At12D13_RS11915 PF03144 Elongation factor Tu domain 2 At12D13_RS11915 PF00679 Elongation factor G C-terminus At12D13_RS11915 PF00009 Elongation factor Tu GTP binding domain At12D13_RS11920 PF01432 Peptidase family M3 At12D13_RS11925 PF01047 MarR family At12D13_RS11930 PF07690 Major Facilitator Superfamily At12D13_RS11935 PF00764 Arginosuccinate synthase At12D13_RS11940 PF00106 short chain dehydrogenase At12D13_RS11945 PF01810 LysE type translocator At12D13_RS11950 PF00005 ABC transporter At12D13_RS11955 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS11965 PF04055 Radical SAM superfamily At12D13_RS11980 PF01329 Pterin 4 alpha carbinolamine dehydratase At12D13_RS11985 PF01451 Low molecular weight phosphotyrosine protein phosphatase At12D13_RS11990 PF02834 LigT like Phosphoesterase At12D13_RS11995 PF13472 GDSL-like Lipase/Acylhydrolase family At12D13_RS12000 PF00005 ABC transporter At12D13_RS12010 PF01027 Inhibitor of apoptosis-promoting Bax1 At12D13_RS12025 PF00330 Aconitase family (aconitate hydratase) At12D13_RS12025 PF00694 Aconitase C-terminal domain At12D13_RS12030 PF00005 ABC transporter At12D13_RS12040 PF03379 CcmB protein At12D13_RS12045 PF01578 Cytochrome C assembly protein At12D13_RS12055 PF08534 Redoxin At12D13_RS12060 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS12065 PF10755 Protein of unknown function (DUF2585) At12D13_RS12070 PF04279 Intracellular septation protein A At12D13_RS12075 PF02881 SRP54-type protein, helical bundle domain At12D13_RS12075 PF00448 SRP54-type protein, GTPase domain At12D13_RS12080 PF04055 Radical SAM superfamily At12D13_RS12080 PF00919 Uncharacterized protein family UPF0004 At12D13_RS12085 PF01678 Diaminopimelate epimerase At12D13_RS12090 PF12706 Beta-lactamase superfamily domain At12D13_RS12100 PF02978 Signal peptide binding domain At12D13_RS12100 PF02881 SRP54-type protein, helical bundle domain At12D13_RS12100 PF00448 SRP54-type protein, GTPase domain At12D13_RS12105 PF01817 Chorismate mutase type II At12D13_RS12105 PF02153 Prephenate dehydrogenase At12D13_RS12110 PF00886 Ribosomal protein S16 At12D13_RS12115 PF05239 PRC-barrel domain At12D13_RS12115 PF01782 RimM N-terminal domain At12D13_RS12120 PF01746 tRNA (Guanine-1)-methyltransferase At12D13_RS12130 PF01245 Ribosomal protein L19 At12D13_RS12140 PF00005 ABC transporter At12D13_RS12140 PF00664 ABC transporter transmembrane region At12D13_RS12145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At12D13_RS12145 PF00529 HlyD membrane-fusion protein of T1SS At12D13_RS12155 PF07690 Major Facilitator Superfamily At12D13_RS12165 PF00330 Aconitase family (aconitate hydratase) At12D13_RS12170 PF01435 Peptidase family M48 At12D13_RS12180 PF00005 ABC transporter At12D13_RS12185 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS12190 PF01547 Bacterial extracellular solute-binding protein At12D13_RS12200 PF00005 ABC transporter At12D13_RS12200 PF16326 ABC transporter C-terminal domain At12D13_RS12210 PF04204 Homoserine O-succinyltransferase At12D13_RS12215 PF01263 Aldose 1-epimerase At12D13_RS12220 PF00912 Transglycosylase At12D13_RS12225 PF00348 Polyprenyl synthetase At12D13_RS12230 PF00691 OmpA family At12D13_RS12230 PF13488 Glycine zipper At12D13_RS12235 PF04551 GcpE protein At12D13_RS12240 PF07690 Major Facilitator Superfamily At12D13_RS12245 PF00455 DeoR C terminal sensor domain At12D13_RS12245 PF08220 DeoR-like helix-turn-helix domain At12D13_RS12250 PF00682 HMGL-like At12D13_RS12250 PF00364 Biotin-requiring enzyme At12D13_RS12250 PF02785 Biotin carboxylase C-terminal domain At12D13_RS12250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At12D13_RS12250 PF02436 Conserved carboxylase domain At12D13_RS12250 PF00289 Biotin carboxylase, N-terminal domain At12D13_RS12255 PF00196 Bacterial regulatory proteins, luxR family At12D13_RS12255 PF00072 Response regulator receiver domain At12D13_RS12260 PF00664 ABC transporter transmembrane region At12D13_RS12260 PF00005 ABC transporter At12D13_RS12270 PF06165 Glycosyltransferase family 36 At12D13_RS12270 PF10091 Putative glucoamylase At12D13_RS12270 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain At12D13_RS12275 PF07687 Peptidase dimerisation domain At12D13_RS12275 PF01546 Peptidase family M20/M25/M40 At12D13_RS12285 PF01266 FAD dependent oxidoreductase At12D13_RS12290 PF00291 Pyridoxal-phosphate dependent enzyme At12D13_RS12295 PF00920 Dehydratase family At12D13_RS12300 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At12D13_RS12300 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At12D13_RS12305 PF01370 NAD dependent epimerase/dehydratase family At12D13_RS12310 PF02913 FAD linked oxidases, C-terminal domain At12D13_RS12310 PF01565 FAD binding domain At12D13_RS12315 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS12315 PF07729 FCD domain At12D13_RS12325 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At12D13_RS12330 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At12D13_RS12335 PF03480 Bacterial extracellular solute-binding protein, family 7 At12D13_RS12340 PF00501 AMP-binding enzyme At12D13_RS12340 PF16177 Acetyl-coenzyme A synthetase N-terminus At12D13_RS12340 PF13193 AMP-binding enzyme C-terminal domain At12D13_RS12350 PF01168 Alanine racemase, N-terminal domain At12D13_RS12355 PF13603 Leucyl-tRNA synthetase, Domain 2 At12D13_RS12355 PF00133 tRNA synthetases class I (I, L, M and V) At12D13_RS12355 PF08264 Anticodon-binding domain of tRNA At12D13_RS12370 PF00037 4Fe-4S binding domain At12D13_RS12370 PF11953 Domain of unknown function (DUF3470) At12D13_RS12390 PF01494 FAD binding domain At12D13_RS12400 PF00543 Nitrogen regulatory protein P-II At12D13_RS12405 PF00909 Ammonium Transporter Family At12D13_RS12410 PF13491 4TM region of DNA translocase FtsK/SpoIIIE At12D13_RS12410 PF17854 FtsK alpha domain At12D13_RS12410 PF01580 FtsK/SpoIIIE family At12D13_RS12410 PF09397 Ftsk gamma domain At12D13_RS12415 PF03548 Outer membrane lipoprotein carrier protein LolA At12D13_RS12430 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS12430 PF00072 Response regulator receiver domain At12D13_RS12440 PF02559 CarD-like/TRCF domain At12D13_RS12445 PF05088 Bacterial NAD-glutamate dehydrogenase At12D13_RS12450 PF11700 Vacuole effluxer Atg22 like At12D13_RS12455 PF07879 PHB/PHA accumulation regulator DNA-binding domain At12D13_RS12455 PF05233 PHB accumulation regulatory domain At12D13_RS12460 PF02803 Thiolase, C-terminal domain At12D13_RS12460 PF00108 Thiolase, N-terminal domain At12D13_RS12475 PF00210 Ferritin-like domain At12D13_RS12480 PF00293 NUDIX domain At12D13_RS12490 PF13180 PDZ domain At12D13_RS12490 PF03572 Peptidase family S41 At12D13_RS12500 PF02590 Predicted SPOUT methyltransferase At12D13_RS12510 PF01467 Cytidylyltransferase-like At12D13_RS12515 PF00171 Aldehyde dehydrogenase family At12D13_RS12520 PF00696 Amino acid kinase family At12D13_RS12520 PF01472 PUA domain At12D13_RS12525 PF01018 GTP1/OBG At12D13_RS12525 PF01926 50S ribosome-binding GTPase At12D13_RS12530 PF13302 Acetyltransferase (GNAT) domain At12D13_RS12540 PF01016 Ribosomal L27 protein At12D13_RS12545 PF00829 Ribosomal prokaryotic L21 protein At12D13_RS12560 PF03328 HpcH/HpaI aldolase/citrate lyase family At12D13_RS12570 PF00694 Aconitase C-terminal domain At12D13_RS12575 PF00180 Isocitrate/isopropylmalate dehydrogenase At12D13_RS12580 PF03150 Di-haem cytochrome c peroxidase At12D13_RS12585 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At12D13_RS12585 PF07685 CobB/CobQ-like glutamine amidotransferase domain At12D13_RS12590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At12D13_RS12590 PF14824 Sirohaem biosynthesis protein central At12D13_RS12590 PF10414 Sirohaem synthase dimerisation region At12D13_RS12595 PF01888 CbiD At12D13_RS12600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At12D13_RS12610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At12D13_RS12615 PF02571 Precorrin-6x reductase CbiJ/CobK At12D13_RS12620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At12D13_RS12625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At12D13_RS12630 PF02570 Precorrin-8X methylmutase At12D13_RS12635 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain At12D13_RS12640 PF02514 CobN/Magnesium Chelatase At12D13_RS12645 PF02492 CobW/HypB/UreG, nucleotide-binding domain At12D13_RS12645 PF07683 Cobalamin synthesis protein cobW C-terminal domain At12D13_RS12655 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP At12D13_RS12660 PF07685 CobB/CobQ-like glutamine amidotransferase domain At12D13_RS12660 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At12D13_RS12665 PF03186 CobD/Cbib protein At12D13_RS12670 PF00155 Aminotransferase class I and II At12D13_RS12675 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_RS12675 PF13378 Enolase C-terminal domain-like At12D13_RS12680 PF05336 L-rhamnose mutarotase At12D13_RS12685 PF01232 Mannitol dehydrogenase Rossmann domain At12D13_RS12685 PF08125 Mannitol dehydrogenase C-terminal domain At12D13_RS12690 PF00107 Zinc-binding dehydrogenase At12D13_RS12690 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS12700 PF00248 Aldo/keto reductase family At12D13_RS12710 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS12715 PF00005 ABC transporter At12D13_RS12720 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS12720 PF07729 FCD domain At12D13_RS12725 PF08666 SAF domain At12D13_RS12725 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus At12D13_RS12730 PF01808 AICARFT/IMPCHase bienzyme At12D13_RS12730 PF02142 MGS-like domain At12D13_RS12740 PF01189 16S rRNA methyltransferase RsmB/F At12D13_RS12740 PF01029 NusB family At12D13_RS12745 PF01435 Peptidase family M48 At12D13_RS12755 PF17762 HTH domain found in ParB protein At12D13_RS12755 PF02195 ParB-like nuclease domain At12D13_RS12760 PF13614 AAA domain At12D13_RS12765 PF02527 rRNA small subunit methyltransferase G At12D13_RS12770 PF13932 GidA associated domain At12D13_RS12770 PF01134 Glucose inhibited division protein A At12D13_RS12775 PF10396 GTP-binding protein TrmE N-terminus At12D13_RS12775 PF12631 MnmE helical domain At12D13_RS12775 PF01926 50S ribosome-binding GTPase At12D13_RS12780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At12D13_RS12780 PF07498 Rho termination factor, N-terminal domain At12D13_RS12780 PF07497 Rho termination factor, RNA-binding domain At12D13_RS12785 PF03653 Uncharacterised protein family (UPF0093) At12D13_RS12790 PF01208 Uroporphyrinogen decarboxylase (URO-D) At12D13_RS12795 PF03618 Kinase/pyrophosphorylase At12D13_RS12800 PF02545 Maf-like protein At12D13_RS12805 PF01488 Shikimate / quinate 5-dehydrogenase At12D13_RS12805 PF18317 Shikimate 5'-dehydrogenase C-terminal domain At12D13_RS12805 PF08501 Shikimate dehydrogenase substrate binding domain At12D13_RS12810 PF01121 Dephospho-CoA kinase At12D13_RS12815 PF00929 Exonuclease At12D13_RS12820 PF02556 Preprotein translocase subunit SecB At12D13_RS12825 PF04186 FxsA cytoplasmic membrane protein At12D13_RS12835 PF06725 3D domain At12D13_RS12835 PF03562 MltA specific insert domain At12D13_RS12850 PF00204 DNA gyrase B At12D13_RS12850 PF01751 Toprim domain At12D13_RS12850 PF00986 DNA gyrase B subunit, carboxyl terminus At12D13_RS12850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS12860 PF01557 Fumarylacetoacetate (FAA) hydrolase family At12D13_RS12875 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase At12D13_RS12880 PF00291 Pyridoxal-phosphate dependent enzyme At12D13_RS12885 PF00290 Tryptophan synthase alpha chain At12D13_RS12890 PF01039 Carboxyl transferase domain At12D13_RS12895 PF08245 Mur ligase middle domain At12D13_RS12895 PF02875 Mur ligase family, glutamate ligase domain At12D13_RS12900 PF00085 Thioredoxin At12D13_RS12905 PF12705 PD-(D/E)XK nuclease superfamily At12D13_RS12905 PF00580 UvrD/REP helicase N-terminal domain At12D13_RS12905 PF13361 UvrD-like helicase C-terminal domain At12D13_RS12915 PF12804 MobA-like NTP transferase domain At12D13_RS12920 PF01636 Phosphotransferase enzyme family At12D13_RS12925 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS12925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS12935 PF05221 S-adenosyl-L-homocysteine hydrolase At12D13_RS12935 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain At12D13_RS12940 PF00381 PTS HPr component phosphorylation site At12D13_RS12945 PF03830 PTS system sorbose subfamily IIB component At12D13_RS12945 PF03610 PTS system fructose IIA component At12D13_RS12950 PF07475 HPr Serine kinase C-terminal domain At12D13_RS12950 PF02603 HPr Serine kinase N terminus At12D13_RS12955 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS12955 PF13755 Sensor N-terminal transmembrane domain At12D13_RS12955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS12955 PF13756 Stimulus-sensing domain At12D13_RS12955 PF00672 HAMP domain At12D13_RS12960 PF00072 Response regulator receiver domain At12D13_RS12960 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS12965 PF01293 Phosphoenolpyruvate carboxykinase At12D13_RS12970 PF00472 RF-1 domain At12D13_RS12975 PF00485 Phosphoribulokinase / Uridine kinase family At12D13_RS12980 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase At12D13_RS12985 PF00977 Histidine biosynthesis protein At12D13_RS12990 PF00977 Histidine biosynthesis protein At12D13_RS12995 PF00117 Glutamine amidotransferase class-I At12D13_RS13005 PF00475 Imidazoleglycerol-phosphate dehydratase At12D13_RS13010 PF00227 Proteasome subunit At12D13_RS13015 PF00004 ATPase family associated with various cellular activities (AAA) At12D13_RS13015 PF10431 C-terminal, D2-small domain, of ClpB protein At12D13_RS13015 PF07724 AAA domain (Cdc48 subfamily) At12D13_RS13025 PF01274 Malate synthase At12D13_RS13040 PF00072 Response regulator receiver domain At12D13_RS13045 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS13045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS13050 PF08482 ATP-dependent helicase C-terminal At12D13_RS13050 PF00271 Helicase conserved C-terminal domain At12D13_RS13050 PF04408 Helicase associated domain (HA2) At12D13_RS13050 PF00270 DEAD/DEAH box helicase At12D13_RS13095 PF09382 RQC domain At12D13_RS13095 PF00570 HRDC domain At12D13_RS13095 PF00271 Helicase conserved C-terminal domain At12D13_RS13095 PF00270 DEAD/DEAH box helicase At12D13_RS13095 PF16124 RecQ zinc-binding At12D13_RS13105 PF13407 Periplasmic binding protein domain At12D13_RS13110 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS13115 PF00005 ABC transporter At12D13_RS13120 PF00485 Phosphoribulokinase / Uridine kinase family At12D13_RS13125 PF00462 Glutaredoxin At12D13_RS13130 PF07972 NrdI Flavodoxin like At12D13_RS13135 PF02867 Ribonucleotide reductase, barrel domain At12D13_RS13135 PF00317 Ribonucleotide reductase, all-alpha domain At12D13_RS13135 PF08343 Ribonucleotide reductase N-terminal At12D13_RS13140 PF00268 Ribonucleotide reductase, small chain At12D13_RS13150 PF02463 RecF/RecN/SMC N terminal domain At12D13_RS13155 PF00899 ThiF family At12D13_RS13155 PF00581 Rhodanese-like domain At12D13_RS13170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_RS13170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_RS13180 PF00294 pfkB family carbohydrate kinase At12D13_RS13190 PF05175 Methyltransferase small domain At12D13_RS13190 PF08468 Methyltransferase small domain N-terminal At12D13_RS13195 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain At12D13_RS13195 PF03725 3' exoribonuclease family, domain 2 At12D13_RS13195 PF00575 S1 RNA binding domain At12D13_RS13195 PF01138 3' exoribonuclease family, domain 1 At12D13_RS13195 PF00013 KH domain At12D13_RS13200 PF00312 Ribosomal protein S15 At12D13_RS13205 PF01509 TruB family pseudouridylate synthase (N terminal domain) At12D13_RS13205 PF16198 tRNA pseudouridylate synthase B C-terminal domain At12D13_RS13205 PF09157 Pseudouridine synthase II TruB, C-terminal At12D13_RS13210 PF02033 Ribosome-binding factor A At12D13_RS13215 PF00009 Elongation factor Tu GTP binding domain At12D13_RS13215 PF11987 Translation-initiation factor 2 At12D13_RS13215 PF04760 Translation initiation factor IF-2, N-terminal region At12D13_RS13215 PF03144 Elongation factor Tu domain 2 At12D13_RS13215 PF08364 Bacterial translation initiation factor IF-2 associated region At12D13_RS13225 PF13184 NusA-like KH domain At12D13_RS13225 PF00575 S1 RNA binding domain At12D13_RS13225 PF08529 NusA N-terminal domain At12D13_RS13230 PF02576 RimP N-terminal domain At12D13_RS13230 PF17384 RimP C-terminal SH3 domain At12D13_RS13235 PF05977 Transmembrane secretion effector At12D13_RS13240 PF13406 Transglycosylase SLT domain At12D13_RS13245 PF02132 RecR protein At12D13_RS13245 PF13662 Toprim domain At12D13_RS13255 PF02575 YbaB/EbfC DNA-binding family At12D13_RS13260 PF12169 DNA polymerase III subunits gamma and tau domain III At12D13_RS13260 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding At12D13_RS13260 PF12170 DNA polymerase III tau subunit V interacting with alpha At12D13_RS13275 PF09297 NADH pyrophosphatase zinc ribbon domain At12D13_RS13275 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain At12D13_RS13275 PF00293 NUDIX domain At12D13_RS13280 PF01817 Chorismate mutase type II At12D13_RS13280 PF00800 Prephenate dehydratase At12D13_RS13285 PF02348 Cytidylyltransferase At12D13_RS13290 PF00034 Cytochrome c At12D13_RS13295 PF02397 Bacterial sugar transferase At12D13_RS13300 PF00912 Transglycosylase At12D13_RS13300 PF00905 Penicillin binding protein transpeptidase domain At12D13_RS13305 PF04073 Aminoacyl-tRNA editing domain At12D13_RS13315 PF00313 'Cold-shock' DNA-binding domain At12D13_RS13325 PF07687 Peptidase dimerisation domain At12D13_RS13325 PF01546 Peptidase family M20/M25/M40 At12D13_RS13330 PF01047 MarR family At12D13_RS13340 PF00476 DNA polymerase family A At12D13_RS13340 PF01612 3'-5' exonuclease At12D13_RS13340 PF01367 5'-3' exonuclease, C-terminal SAM fold At12D13_RS13340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain At12D13_RS13350 PF01783 Ribosomal L32p protein family At12D13_RS13355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS13355 PF02743 Cache domain At12D13_RS13355 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS13360 PF00158 Sigma-54 interaction domain At12D13_RS13360 PF00072 Response regulator receiver domain At12D13_RS13360 PF02954 Bacterial regulatory protein, Fis family At12D13_RS13370 PF03401 Tripartite tricarboxylate transporter family receptor At12D13_RS13375 PF07331 Tripartite tricarboxylate transporter TctB family At12D13_RS13380 PF01970 Tripartite tricarboxylate transporter TctA family At12D13_RS13385 PF04102 SlyX At12D13_RS13395 PF00684 DnaJ central domain At12D13_RS13395 PF00226 DnaJ domain At12D13_RS13395 PF01556 DnaJ C terminal domain At12D13_RS13400 PF00012 Hsp70 protein At12D13_RS13415 PF01625 Peptide methionine sulfoxide reductase At12D13_RS13420 PF02608 ABC transporter substrate-binding protein PnrA-like At12D13_RS13425 PF00005 ABC transporter At12D13_RS13430 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS13435 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS13440 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region At12D13_RS13445 PF01048 Phosphorylase superfamily At12D13_RS13450 PF01791 DeoC/LacD family aldolase At12D13_RS13455 PF00591 Glycosyl transferase family, a/b domain At12D13_RS13455 PF02885 Glycosyl transferase family, helical bundle domain At12D13_RS13455 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain At12D13_RS13470 PF00962 Adenosine/AMP deaminase At12D13_RS13475 PF01676 Metalloenzyme superfamily At12D13_RS13485 PF03626 Prokaryotic Cytochrome C oxidase subunit IV At12D13_RS13490 PF00510 Cytochrome c oxidase subunit III At12D13_RS13495 PF00115 Cytochrome C and Quinol oxidase polypeptide I At12D13_RS13500 PF06481 COX Aromatic Rich Motif At12D13_RS13500 PF00116 Cytochrome C oxidase subunit II, periplasmic domain At12D13_RS13505 PF00083 Sugar (and other) transporter At12D13_RS13505 PF07690 Major Facilitator Superfamily At12D13_RS13515 PF01493 GXGXG motif At12D13_RS13515 PF01645 Conserved region in glutamate synthase At12D13_RS13515 PF00310 Glutamine amidotransferases class-II At12D13_RS13515 PF04898 Glutamate synthase central domain At12D13_RS13520 PF00258 Flavodoxin At12D13_RS13520 PF00175 Oxidoreductase NAD-binding domain At12D13_RS13520 PF00667 FAD binding domain At12D13_RS13540 PF02801 Beta-ketoacyl synthase, C-terminal domain At12D13_RS13540 PF00109 Beta-ketoacyl synthase, N-terminal domain At12D13_RS13545 PF07977 FabA-like domain At12D13_RS13560 PF03458 UPF0126 domain At12D13_RS13570 PF06912 Protein of unknown function (DUF1275) At12D13_RS13580 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS13585 PF00005 ABC transporter At12D13_RS13590 PF07702 UTRA domain At12D13_RS13590 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS13595 PF01618 MotA/TolQ/ExbB proton channel family At12D13_RS13600 PF02472 Biopolymer transport protein ExbD/TolR At12D13_RS13610 PF02615 Malate/L-lactate dehydrogenase At12D13_RS13630 PF00625 Guanylate kinase At12D13_RS13635 PF07969 Amidohydrolase family At12D13_RS13640 PF06299 Protein of unknown function (DUF1045) At12D13_RS13645 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS13650 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS13660 PF00005 ABC transporter At12D13_RS13670 PF00005 ABC transporter At12D13_RS13675 PF00005 ABC transporter At12D13_RS13680 PF06007 Phosphonate metabolism protein PhnJ At12D13_RS13685 PF05861 Bacterial phosphonate metabolism protein (PhnI) At12D13_RS13690 PF05845 Bacterial phosphonate metabolism protein (PhnH) At12D13_RS13695 PF06754 Phosphonate metabolism protein PhnG At12D13_RS13700 PF07702 UTRA domain At12D13_RS13700 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS13705 PF05173 Dihydrodipicolinate reductase, C-terminus At12D13_RS13705 PF01113 Dihydrodipicolinate reductase, N-terminus At12D13_RS13710 PF02685 Glucokinase At12D13_RS13715 PF02142 MGS-like domain At12D13_RS13720 PF03411 Penicillin-insensitive murein endopeptidase At12D13_RS13725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS13730 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS13735 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS13735 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS13740 PF00005 ABC transporter At12D13_RS13740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS13745 PF01266 FAD dependent oxidoreductase At12D13_RS13750 PF00120 Glutamine synthetase, catalytic domain At12D13_RS13755 PF01266 FAD dependent oxidoreductase At12D13_RS13765 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS13770 PF00005 ABC transporter At12D13_RS13775 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS13780 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At12D13_RS13790 PF02082 Transcriptional regulator At12D13_RS13795 PF13416 Bacterial extracellular solute-binding protein At12D13_RS13810 PF00171 Aldehyde dehydrogenase family At12D13_RS13820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS13820 PF03466 LysR substrate binding domain At12D13_RS13825 PF00892 EamA-like transporter family At12D13_RS13840 PF00877 NlpC/P60 family At12D13_RS13850 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family At12D13_RS13850 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain At12D13_RS13855 PF02789 Cytosol aminopeptidase family, N-terminal domain At12D13_RS13855 PF00883 Cytosol aminopeptidase family, catalytic domain At12D13_RS13875 PF00437 Type II/IV secretion system protein At12D13_RS13890 PF04972 BON domain At12D13_RS13890 PF13629 Pilus formation protein N terminal region At12D13_RS13890 PF00263 Bacterial type II and III secretion system protein At12D13_RS13945 PF07411 Domain of unknown function (DUF1508) At12D13_RS13950 PF01183 Glycosyl hydrolases family 25 At12D13_RS13955 PF00892 EamA-like transporter family At12D13_RS13960 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS13960 PF00155 Aminotransferase class I and II At12D13_RS13975 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_RS13975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At12D13_RS13990 PF06421 GTP-binding protein LepA C-terminus At12D13_RS13990 PF03144 Elongation factor Tu domain 2 At12D13_RS13990 PF00679 Elongation factor G C-terminus At12D13_RS13990 PF00009 Elongation factor Tu GTP binding domain At12D13_RS13995 PF00795 Carbon-nitrogen hydrolase At12D13_RS14025 PF12833 Helix-turn-helix domain At12D13_RS14025 PF02311 AraC-like ligand binding domain At12D13_RS14030 PF03480 Bacterial extracellular solute-binding protein, family 7 At12D13_RS14055 PF00707 Translation initiation factor IF-3, C-terminal domain At12D13_RS14055 PF05198 Translation initiation factor IF-3, N-terminal domain At12D13_RS14060 PF01632 Ribosomal protein L35 At12D13_RS14065 PF00453 Ribosomal protein L20 At12D13_RS14075 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain At12D13_RS14075 PF01409 tRNA synthetases class II core domain (F) At12D13_RS14080 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain At12D13_RS14080 PF03147 Ferredoxin-fold anticodon binding domain At12D13_RS14080 PF01588 Putative tRNA binding domain At12D13_RS14080 PF03483 B3/4 domain At12D13_RS14080 PF03484 tRNA synthetase B5 domain At12D13_RS14085 PF00248 Aldo/keto reductase family At12D13_RS14090 PF03466 LysR substrate binding domain At12D13_RS14090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS14100 PF00248 Aldo/keto reductase family At12D13_RS14105 PF01965 DJ-1/PfpI family At12D13_RS14105 PF12833 Helix-turn-helix domain At12D13_RS14115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS14115 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS14130 PF13742 OB-fold nucleic acid binding domain At12D13_RS14130 PF02601 Exonuclease VII, large subunit At12D13_RS14135 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_RS14135 PF13378 Enolase C-terminal domain-like At12D13_RS14140 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS14140 PF07729 FCD domain At12D13_RS14145 PF01047 MarR family At12D13_RS14150 PF00892 EamA-like transporter family At12D13_RS14155 PF02073 Thermophilic metalloprotease (M29) At12D13_RS14160 PF04073 Aminoacyl-tRNA editing domain At12D13_RS14165 PF03960 ArsC family At12D13_RS14180 PF00440 Bacterial regulatory proteins, tetR family At12D13_RS14190 PF00117 Glutamine amidotransferase class-I At12D13_RS14190 PF00958 GMP synthase C terminal domain At12D13_RS14205 PF03073 TspO/MBR family At12D13_RS14230 PF01189 16S rRNA methyltransferase RsmB/F At12D13_RS14230 PF01029 NusB family At12D13_RS14235 PF03330 Lytic transglycolase At12D13_RS14245 PF08331 Domain of unknown function (DUF1730) At12D13_RS14250 PF00043 Glutathione S-transferase, C-terminal domain At12D13_RS14250 PF13417 Glutathione S-transferase, N-terminal domain At12D13_RS14255 PF02673 Bacitracin resistance protein BacA At12D13_RS14275 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family At12D13_RS14285 PF00398 Ribosomal RNA adenine dimethylase At12D13_RS14290 PF00712 DNA polymerase III beta subunit, N-terminal domain At12D13_RS14290 PF02767 DNA polymerase III beta subunit, central domain At12D13_RS14290 PF02768 DNA polymerase III beta subunit, C-terminal domain At12D13_RS14295 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At12D13_RS14300 PF02021 Uncharacterised protein family UPF0102 At12D13_RS14305 PF12464 Maltose acetyltransferase At12D13_RS14305 PF14602 Hexapeptide repeat of succinyl-transferase At12D13_RS14310 PF13416 Bacterial extracellular solute-binding protein At12D13_RS14315 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS14320 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS14325 PF00005 ABC transporter At12D13_RS14335 PF02951 Prokaryotic glutathione synthetase, N-terminal domain At12D13_RS14335 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain At12D13_RS14340 PF13335 Magnesium chelatase, subunit ChlI C-terminal At12D13_RS14340 PF01078 Magnesium chelatase, subunit ChlI At12D13_RS14345 PF00291 Pyridoxal-phosphate dependent enzyme At12D13_RS14350 PF01810 LysE type translocator At12D13_RS14355 PF00692 dUTPase At12D13_RS14360 PF03144 Elongation factor Tu domain 2 At12D13_RS14360 PF00009 Elongation factor Tu GTP binding domain At12D13_RS14360 PF16658 Class II release factor RF3, C-terminal domain At12D13_RS14365 PF04127 DNA / pantothenate metabolism flavoprotein At12D13_RS14365 PF02441 Flavoprotein At12D13_RS14380 PF03109 ABC1 family At12D13_RS14385 PF01209 ubiE/COQ5 methyltransferase family At12D13_RS14390 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain At12D13_RS14390 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain At12D13_RS14390 PF06827 Zinc finger found in FPG and IleRS At12D13_RS14395 PF00378 Enoyl-CoA hydratase/isomerase At12D13_RS14400 PF01649 Ribosomal protein S20 At12D13_RS14445 PF01757 Acyltransferase family At12D13_RS14495 PF07729 FCD domain At12D13_RS14495 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS14500 PF00005 ABC transporter At12D13_RS14500 PF17912 MalK OB fold domain At12D13_RS14505 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS14510 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS14515 PF01547 Bacterial extracellular solute-binding protein At12D13_RS14535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_RS14535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_RS14545 PF13378 Enolase C-terminal domain-like At12D13_RS14545 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_RS14575 PF00196 Bacterial regulatory proteins, luxR family At12D13_RS14575 PF00072 Response regulator receiver domain At12D13_RS14580 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS14585 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS14585 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS14590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS14590 PF00005 ABC transporter At12D13_RS14605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS14620 PF01112 Asparaginase At12D13_RS14630 PF01266 FAD dependent oxidoreductase At12D13_RS14635 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS14635 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS14640 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS14645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS14650 PF01266 FAD dependent oxidoreductase At12D13_RS14655 PF00300 Histidine phosphatase superfamily (branch 1) At12D13_RS14655 PF00106 short chain dehydrogenase At12D13_RS14665 PF00005 ABC transporter At12D13_RS14665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS14680 PF03552 Cellulose synthase At12D13_RS14680 PF00535 Glycosyl transferase family 2 At12D13_RS14680 PF07238 PilZ domain At12D13_RS14690 PF00999 Sodium/hydrogen exchanger family At12D13_RS14695 PF06472 ABC transporter transmembrane region 2 At12D13_RS14695 PF00005 ABC transporter At12D13_RS14700 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS14705 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS14715 PF00005 ABC transporter At12D13_RS14720 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS14725 PF02126 Phosphotriesterase family At12D13_RS14735 PF00294 pfkB family carbohydrate kinase At12D13_RS14745 PF07687 Peptidase dimerisation domain At12D13_RS14745 PF01546 Peptidase family M20/M25/M40 At12D13_RS14755 PF00668 Condensation domain At12D13_RS14755 PF00501 AMP-binding enzyme At12D13_RS14755 PF00975 Thioesterase domain At12D13_RS14755 PF13193 AMP-binding enzyme C-terminal domain At12D13_RS14755 PF00550 Phosphopantetheine attachment site At12D13_RS14760 PF01177 Asp/Glu/Hydantoin racemase At12D13_RS14770 PF00440 Bacterial regulatory proteins, tetR family At12D13_RS14775 PF00860 Permease family At12D13_RS14780 PF00144 Beta-lactamase At12D13_RS14785 PF03466 LysR substrate binding domain At12D13_RS14785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS14815 PF08281 Sigma-70, region 4 At12D13_RS14815 PF04542 Sigma-70 region 2 At12D13_RS14820 PF01177 Asp/Glu/Hydantoin racemase At12D13_RS14825 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS14830 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS14840 PF00005 ABC transporter At12D13_RS14840 PF08402 TOBE domain At12D13_RS14865 PF08447 PAS fold At12D13_RS14865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS14865 PF13426 PAS domain At12D13_RS14875 PF13416 Bacterial extracellular solute-binding protein At12D13_RS14880 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS14885 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS14890 PF00005 ABC transporter At12D13_RS14890 PF17912 MalK OB fold domain At12D13_RS14895 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS14900 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS14910 PF17912 MalK OB fold domain At12D13_RS14910 PF00005 ABC transporter At12D13_RS14915 PF06964 Alpha-L-arabinofuranosidase C-terminal domain At12D13_RS14930 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS14940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_RS14940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_RS14945 PF01261 Xylose isomerase-like TIM barrel At12D13_RS14950 PF03459 TOBE domain At12D13_RS14950 PF17912 MalK OB fold domain At12D13_RS14950 PF00005 ABC transporter At12D13_RS14955 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS14960 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS14965 PF13416 Bacterial extracellular solute-binding protein At12D13_RS14970 PF00440 Bacterial regulatory proteins, tetR family At12D13_RS14970 PF17938 Tetracyclin repressor-like, C-terminal domain At12D13_RS14975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS14975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS14990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS14990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS15000 PF00313 'Cold-shock' DNA-binding domain At12D13_RS15010 PF01165 Ribosomal protein S21 At12D13_RS15030 PF07470 Glycosyl Hydrolase Family 88 At12D13_RS15035 PF00295 Glycosyl hydrolases family 28 At12D13_RS15045 PF00005 ABC transporter At12D13_RS15045 PF08402 TOBE domain At12D13_RS15050 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15055 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15060 PF12833 Helix-turn-helix domain At12D13_RS15060 PF02311 AraC-like ligand binding domain At12D13_RS15065 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At12D13_RS15075 PF03480 Bacterial extracellular solute-binding protein, family 7 At12D13_RS15080 PF04909 Amidohydrolase At12D13_RS15085 PF13378 Enolase C-terminal domain-like At12D13_RS15085 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_RS15090 PF00701 Dihydrodipicolinate synthetase family At12D13_RS15100 PF04962 KduI/IolB family At12D13_RS15105 PF01370 NAD dependent epimerase/dehydratase family At12D13_RS15110 PF07729 FCD domain At12D13_RS15110 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS15120 PF00557 Metallopeptidase family M24 At12D13_RS15120 PF01321 Creatinase/Prolidase N-terminal domain At12D13_RS15125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS15125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS15130 PF00005 ABC transporter At12D13_RS15130 PF17912 MalK OB fold domain At12D13_RS15135 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15140 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15145 PF13416 Bacterial extracellular solute-binding protein At12D13_RS15160 PF02311 AraC-like ligand binding domain At12D13_RS15160 PF12833 Helix-turn-helix domain At12D13_RS15165 PF07690 Major Facilitator Superfamily At12D13_RS15170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS15170 PF03466 LysR substrate binding domain At12D13_RS15175 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At12D13_RS15185 PF03480 Bacterial extracellular solute-binding protein, family 7 At12D13_RS15190 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At12D13_RS15190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At12D13_RS15205 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS15210 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS15210 PF16912 Glucose dehydrogenase C-terminus At12D13_RS15230 PF00294 pfkB family carbohydrate kinase At12D13_RS15235 PF08013 Tagatose 6 phosphate kinase At12D13_RS15240 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15245 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15250 PF08402 TOBE domain At12D13_RS15250 PF00005 ABC transporter At12D13_RS15255 PF00005 ABC transporter At12D13_RS15255 PF17912 MalK OB fold domain At12D13_RS15260 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15265 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15270 PF01547 Bacterial extracellular solute-binding protein At12D13_RS15275 PF01053 Cys/Met metabolism PLP-dependent enzyme At12D13_RS15285 PF00075 RNase H At12D13_RS15290 PF01297 Zinc-uptake complex component A periplasmic At12D13_RS15295 PF00950 ABC 3 transport family At12D13_RS15300 PF00005 ABC transporter At12D13_RS15305 PF02492 CobW/HypB/UreG, nucleotide-binding domain At12D13_RS15305 PF07683 Cobalamin synthesis protein cobW C-terminal domain At12D13_RS15320 PF02492 CobW/HypB/UreG, nucleotide-binding domain At12D13_RS15320 PF07683 Cobalamin synthesis protein cobW C-terminal domain At12D13_RS15325 PF13416 Bacterial extracellular solute-binding protein At12D13_RS15330 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15335 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15340 PF00005 ABC transporter At12D13_RS15340 PF08402 TOBE domain At12D13_RS15355 PF03922 OmpW family At12D13_RS15375 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At12D13_RS15375 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain At12D13_RS15380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS15380 PF03466 LysR substrate binding domain At12D13_RS15385 PF13407 Periplasmic binding protein domain At12D13_RS15390 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS15395 PF00005 ABC transporter At12D13_RS15400 PF00440 Bacterial regulatory proteins, tetR family At12D13_RS15400 PF08361 MAATS-type transcriptional repressor, C-terminal region At12D13_RS15405 PF00873 AcrB/AcrD/AcrF family At12D13_RS15410 PF00529 HlyD membrane-fusion protein of T1SS At12D13_RS15410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At12D13_RS15415 PF00563 EAL domain At12D13_RS15415 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS15415 PF03707 Bacterial signalling protein N terminal repeat At12D13_RS15420 PF05899 Protein of unknown function (DUF861) At12D13_RS15420 PF07883 Cupin domain At12D13_RS15430 PF00563 EAL domain At12D13_RS15430 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS15430 PF08447 PAS fold At12D13_RS15430 PF08448 PAS fold At12D13_RS15435 PF02615 Malate/L-lactate dehydrogenase At12D13_RS15440 PF13491 4TM region of DNA translocase FtsK/SpoIIIE At12D13_RS15440 PF17854 FtsK alpha domain At12D13_RS15440 PF09397 Ftsk gamma domain At12D13_RS15440 PF01580 FtsK/SpoIIIE family At12D13_RS15445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS15450 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15455 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15460 PF00005 ABC transporter At12D13_RS15460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS15465 PF00005 ABC transporter At12D13_RS15465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS15470 PF00266 Aminotransferase class-V At12D13_RS15485 PF00920 Dehydratase family At12D13_RS15495 PF13407 Periplasmic binding protein domain At12D13_RS15500 PF00005 ABC transporter At12D13_RS15505 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS15510 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS15515 PF07729 FCD domain At12D13_RS15515 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS15530 PF01336 OB-fold nucleic acid binding domain At12D13_RS15530 PF14579 Helix-hairpin-helix motif At12D13_RS15530 PF02811 PHP domain At12D13_RS15530 PF17657 Bacterial DNA polymerase III alpha subunit finger domain At12D13_RS15530 PF07733 Bacterial DNA polymerase III alpha NTPase domain At12D13_RS15550 PF13660 Domain of unknown function (DUF4147) At12D13_RS15550 PF05161 MOFRL family At12D13_RS15560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS15560 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS15570 PF03459 TOBE domain At12D13_RS15570 PF00005 ABC transporter At12D13_RS15570 PF17912 MalK OB fold domain At12D13_RS15575 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15580 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15585 PF01547 Bacterial extracellular solute-binding protein At12D13_RS15595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS15605 PF01425 Amidase At12D13_RS15610 PF13188 PAS domain At12D13_RS15610 PF03707 Bacterial signalling protein N terminal repeat At12D13_RS15610 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS15610 PF00563 EAL domain At12D13_RS15615 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_RS15625 PF03776 Septum formation topological specificity factor MinE At12D13_RS15630 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At12D13_RS15635 PF05209 Septum formation inhibitor MinC, N-terminal domain At12D13_RS15635 PF03775 Septum formation inhibitor MinC, C-terminal domain At12D13_RS15645 PF13419 Haloacid dehalogenase-like hydrolase At12D13_RS15650 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS15650 PF07729 FCD domain At12D13_RS15655 PF03480 Bacterial extracellular solute-binding protein, family 7 At12D13_RS15665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At12D13_RS15670 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS15670 PF00107 Zinc-binding dehydrogenase At12D13_RS15675 PF03786 D-mannonate dehydratase (UxuA) At12D13_RS15685 PF00171 Aldehyde dehydrogenase family At12D13_RS15690 PF03480 Bacterial extracellular solute-binding protein, family 7 At12D13_RS15695 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At12D13_RS15695 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At12D13_RS15700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS15700 PF00005 ABC transporter At12D13_RS15705 PF03841 L-seryl-tRNA selenium transferase At12D13_RS15720 PF01979 Amidohydrolase family At12D13_RS15725 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS15725 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15730 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS15750 PF00534 Glycosyl transferases group 1 At12D13_RS15750 PF13439 Glycosyltransferase Family 4 At12D13_RS15755 PF02563 Polysaccharide biosynthesis/export protein At12D13_RS15760 PF13533 Biotin-lipoyl like At12D13_RS15765 PF00873 AcrB/AcrD/AcrF family At12D13_RS15780 PF01613 Flavin reductase like domain At12D13_RS15785 PF00248 Aldo/keto reductase family At12D13_RS15790 PF00296 Luciferase-like monooxygenase At12D13_RS15800 PF00005 ABC transporter At12D13_RS15800 PF08402 TOBE domain At12D13_RS15805 PF01547 Bacterial extracellular solute-binding protein At12D13_RS15810 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15815 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15820 PF01055 Glycosyl hydrolases family 31 At12D13_RS15825 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS15830 PF09084 NMT1/THI5 like At12D13_RS15835 PF02110 Hydroxyethylthiazole kinase family At12D13_RS15840 PF02581 Thiamine monophosphate synthase At12D13_RS15845 PF08543 Phosphomethylpyrimidine kinase At12D13_RS15855 PF01037 Lrp/AsnC ligand binding domain At12D13_RS15860 PF00842 Alanine racemase, C-terminal domain At12D13_RS15860 PF01168 Alanine racemase, N-terminal domain At12D13_RS15865 PF01266 FAD dependent oxidoreductase At12D13_RS15880 PF00158 Sigma-54 interaction domain At12D13_RS15880 PF00072 Response regulator receiver domain At12D13_RS15880 PF02954 Bacterial regulatory protein, Fis family At12D13_RS15930 PF16363 GDP-mannose 4,6 dehydratase At12D13_RS15935 PF16363 GDP-mannose 4,6 dehydratase At12D13_RS15945 PF00072 Response regulator receiver domain At12D13_RS15945 PF00196 Bacterial regulatory proteins, luxR family At12D13_RS15965 PF00664 ABC transporter transmembrane region At12D13_RS15965 PF00005 ABC transporter At12D13_RS15970 PF00529 HlyD membrane-fusion protein of T1SS At12D13_RS15985 PF02563 Polysaccharide biosynthesis/export protein At12D13_RS15995 PF02397 Bacterial sugar transferase At12D13_RS16010 PF00202 Aminotransferase class-III At12D13_RS16015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS16015 PF00672 HAMP domain At12D13_RS16020 PF17969 L,D-transpeptidase C-terminal domain At12D13_RS16020 PF03734 L,D-transpeptidase catalytic domain At12D13_RS16020 PF01476 LysM domain At12D13_RS16040 PF02245 Methylpurine-DNA glycosylase (MPG) At12D13_RS16055 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS16060 PF01547 Bacterial extracellular solute-binding protein At12D13_RS16065 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS16070 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS16075 PF00005 ABC transporter At12D13_RS16075 PF17912 MalK OB fold domain At12D13_RS16075 PF03459 TOBE domain At12D13_RS16085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS16085 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS16090 PF04055 Radical SAM superfamily At12D13_RS16095 PF01242 6-pyruvoyl tetrahydropterin synthase At12D13_RS16100 PF06508 Queuosine biosynthesis protein QueC At12D13_RS16105 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS16105 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS16115 PF00005 ABC transporter At12D13_RS16115 PF17912 MalK OB fold domain At12D13_RS16120 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS16125 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS16130 PF01547 Bacterial extracellular solute-binding protein At12D13_RS16135 PF01050 Mannose-6-phosphate isomerase At12D13_RS16135 PF00483 Nucleotidyl transferase At12D13_RS16140 PF01011 PQQ enzyme repeat At12D13_RS16145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS16145 PF03466 LysR substrate binding domain At12D13_RS16150 PF01515 Phosphate acetyl/butaryl transferase At12D13_RS16150 PF03949 Malic enzyme, NAD binding domain At12D13_RS16150 PF00390 Malic enzyme, N-terminal domain At12D13_RS16155 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_RS16160 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS16165 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS16170 PF00005 ABC transporter At12D13_RS16175 PF03972 MmgE/PrpD family At12D13_RS16180 PF00296 Luciferase-like monooxygenase At12D13_RS16185 PF08447 PAS fold At12D13_RS16185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS16185 PF13426 PAS domain At12D13_RS16190 PF01266 FAD dependent oxidoreductase At12D13_RS16210 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At12D13_RS16215 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At12D13_RS16220 PF03480 Bacterial extracellular solute-binding protein, family 7 At12D13_RS16225 PF07722 Peptidase C26 At12D13_RS16230 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS16235 PF00005 ABC transporter At12D13_RS16240 PF13407 Periplasmic binding protein domain At12D13_RS16250 PF01546 Peptidase family M20/M25/M40 At12D13_RS16255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS16265 PF00005 ABC transporter At12D13_RS16265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS16270 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS16270 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS16275 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS16280 PF03466 LysR substrate binding domain At12D13_RS16280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS16285 PF00529 HlyD membrane-fusion protein of T1SS At12D13_RS16285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At12D13_RS16290 PF00005 ABC transporter At12D13_RS16290 PF00664 ABC transporter transmembrane region At12D13_RS16310 PF04542 Sigma-70 region 2 At12D13_RS16310 PF08281 Sigma-70, region 4 At12D13_RS16310 PF12680 SnoaL-like domain At12D13_RS16315 PF00005 ABC transporter At12D13_RS16320 PF01032 FecCD transport family At12D13_RS16335 PF01209 ubiE/COQ5 methyltransferase family At12D13_RS16340 PF00127 Copper binding proteins, plastocyanin/azurin family At12D13_RS16345 PF00005 ABC transporter At12D13_RS16350 PF01032 FecCD transport family At12D13_RS16365 PF07687 Peptidase dimerisation domain At12D13_RS16365 PF01546 Peptidase family M20/M25/M40 At12D13_RS16370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_RS16380 PF00171 Aldehyde dehydrogenase family At12D13_RS16385 PF00180 Isocitrate/isopropylmalate dehydrogenase At12D13_RS16390 PF00171 Aldehyde dehydrogenase family At12D13_RS16395 PF01266 FAD dependent oxidoreductase At12D13_RS16410 PF00202 Aminotransferase class-III At12D13_RS16420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS16425 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS16430 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS16430 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS16435 PF00005 ABC transporter At12D13_RS16435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS16440 PF01037 Lrp/AsnC ligand binding domain At12D13_RS16445 PF01266 FAD dependent oxidoreductase At12D13_RS16455 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_RS16460 PF00005 ABC transporter At12D13_RS16470 PF07687 Peptidase dimerisation domain At12D13_RS16470 PF01546 Peptidase family M20/M25/M40 At12D13_RS16475 PF00296 Luciferase-like monooxygenase At12D13_RS16480 PF00296 Luciferase-like monooxygenase At12D13_RS16485 PF02082 Transcriptional regulator At12D13_RS16495 PF01613 Flavin reductase like domain At12D13_RS16500 PF00296 Luciferase-like monooxygenase At12D13_RS16520 PF00296 Luciferase-like monooxygenase At12D13_RS16525 PF02770 Acyl-CoA dehydrogenase, middle domain At12D13_RS16525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_RS16525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At12D13_RS16535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS16540 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS16545 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS16550 PF00005 ABC transporter At12D13_RS16550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS16555 PF00005 ABC transporter At12D13_RS16555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS16560 PF00248 Aldo/keto reductase family At12D13_RS16565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_RS16565 PF08028 Acyl-CoA dehydrogenase, C-terminal domain At12D13_RS16570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS16570 PF03466 LysR substrate binding domain At12D13_RS16575 PF00296 Luciferase-like monooxygenase At12D13_RS16590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS16595 PF01546 Peptidase family M20/M25/M40 At12D13_RS16595 PF07687 Peptidase dimerisation domain At12D13_RS16600 PF00296 Luciferase-like monooxygenase At12D13_RS16605 PF05368 NmrA-like family At12D13_RS16615 PF00296 Luciferase-like monooxygenase At12D13_RS16620 PF00296 Luciferase-like monooxygenase At12D13_RS16625 PF13378 Enolase C-terminal domain-like At12D13_RS16625 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_RS16635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS16640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS16640 PF00005 ABC transporter At12D13_RS16645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS16645 PF00005 ABC transporter At12D13_RS16650 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS16650 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS16655 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS16665 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS16665 PF07729 FCD domain At12D13_RS16675 PF00561 alpha/beta hydrolase fold At12D13_RS16690 PF00753 Metallo-beta-lactamase superfamily At12D13_RS16690 PF04273 Putative phosphatase (DUF442) At12D13_RS16700 PF04143 Sulphur transport At12D13_RS16710 PF01676 Metalloenzyme superfamily At12D13_RS16710 PF06415 BPG-independent PGAM N-terminus (iPGM_N) At12D13_RS16720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) At12D13_RS16720 PF00364 Biotin-requiring enzyme At12D13_RS16720 PF02817 e3 binding domain At12D13_RS16725 PF02780 Transketolase, C-terminal domain At12D13_RS16725 PF02779 Transketolase, pyrimidine binding domain At12D13_RS16730 PF00676 Dehydrogenase E1 component At12D13_RS16730 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal At12D13_RS16735 PF02770 Acyl-CoA dehydrogenase, middle domain At12D13_RS16735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_RS16735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At12D13_RS16740 PF00108 Thiolase, N-terminal domain At12D13_RS16740 PF02803 Thiolase, C-terminal domain At12D13_RS16745 PF01037 Lrp/AsnC ligand binding domain At12D13_RS16750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_RS16750 PF02770 Acyl-CoA dehydrogenase, middle domain At12D13_RS16750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At12D13_RS16755 PF01039 Carboxyl transferase domain At12D13_RS16760 PF02785 Biotin carboxylase C-terminal domain At12D13_RS16760 PF00289 Biotin carboxylase, N-terminal domain At12D13_RS16760 PF00364 Biotin-requiring enzyme At12D13_RS16760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At12D13_RS16765 PF00682 HMGL-like At12D13_RS16770 PF00378 Enoyl-CoA hydratase/isomerase At12D13_RS16775 PF02569 Pantoate-beta-alanine ligase At12D13_RS16780 PF02548 Ketopantoate hydroxymethyltransferase At12D13_RS16785 PF01261 Xylose isomerase-like TIM barrel At12D13_RS16790 PF00596 Class II Aldolase and Adducin N-terminal domain At12D13_RS16795 PF00455 DeoR C terminal sensor domain At12D13_RS16795 PF08220 DeoR-like helix-turn-helix domain At12D13_RS16800 PF13407 Periplasmic binding protein domain At12D13_RS16810 PF00005 ABC transporter At12D13_RS16815 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS16820 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS16825 PF05336 L-rhamnose mutarotase At12D13_RS16835 PF00561 alpha/beta hydrolase fold At12D13_RS16845 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS16845 PF00563 EAL domain At12D13_RS16845 PF08447 PAS fold At12D13_RS16845 PF08448 PAS fold At12D13_RS16860 PF00171 Aldehyde dehydrogenase family At12D13_RS16865 PF08713 DNA alkylation repair enzyme At12D13_RS16870 PF00005 ABC transporter At12D13_RS16875 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS16880 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS16905 PF08241 Methyltransferase domain At12D13_RS16915 PF00795 Carbon-nitrogen hydrolase At12D13_RS16920 PF00462 Glutaredoxin At12D13_RS16930 PF08241 Methyltransferase domain At12D13_RS16945 PF00293 NUDIX domain At12D13_RS16950 PF13508 Acetyltransferase (GNAT) domain At12D13_RS16950 PF00583 Acetyltransferase (GNAT) family At12D13_RS16955 PF01960 ArgJ family At12D13_RS16965 PF07516 SecA Wing and Scaffold domain At12D13_RS16965 PF02810 SEC-C motif At12D13_RS16965 PF07517 SecA DEAD-like domain At12D13_RS16965 PF01043 SecA preprotein cross-linking domain At12D13_RS16970 PF00892 EamA-like transporter family At12D13_RS16975 PF01757 Acyltransferase family At12D13_RS17005 PF00248 Aldo/keto reductase family At12D13_RS17010 PF03786 D-mannonate dehydratase (UxuA) At12D13_RS17015 PF01232 Mannitol dehydrogenase Rossmann domain At12D13_RS17015 PF08125 Mannitol dehydrogenase C-terminal domain At12D13_RS17020 PF00106 short chain dehydrogenase At12D13_RS17025 PF07729 FCD domain At12D13_RS17025 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS17035 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS17040 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS17045 PF00005 ABC transporter At12D13_RS17075 PF00149 Calcineurin-like phosphoesterase At12D13_RS17080 PF02734 DAK2 domain At12D13_RS17080 PF02733 Dak1 domain At12D13_RS17085 PF03600 Citrate transporter At12D13_RS17085 PF02080 TrkA-C domain At12D13_RS17105 PF13439 Glycosyltransferase Family 4 At12D13_RS17115 PF01943 Polysaccharide biosynthesis protein At12D13_RS17125 PF00534 Glycosyl transferases group 1 At12D13_RS17125 PF13579 Glycosyl transferase 4-like domain At12D13_RS17145 PF13807 G-rich domain on putative tyrosine kinase At12D13_RS17145 PF02706 Chain length determinant protein At12D13_RS17145 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At12D13_RS17165 PF00534 Glycosyl transferases group 1 At12D13_RS17165 PF13439 Glycosyltransferase Family 4 At12D13_RS17170 PF13439 Glycosyltransferase Family 4 At12D13_RS17170 PF00534 Glycosyl transferases group 1 At12D13_RS17185 PF03449 Transcription elongation factor, N-terminal At12D13_RS17185 PF01272 Transcription elongation factor, GreA/GreB, C-term At12D13_RS17190 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) At12D13_RS17190 PF00722 Glycosyl hydrolases family 16 At12D13_RS17220 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding At12D13_RS17235 PF01381 Helix-turn-helix At12D13_RS17245 PF00005 ABC transporter At12D13_RS17250 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS17255 PF13407 Periplasmic binding protein domain At12D13_RS17265 PF01266 FAD dependent oxidoreductase At12D13_RS17265 PF16901 C-terminal domain of alpha-glycerophosphate oxidase At12D13_RS17275 PF01642 Methylmalonyl-CoA mutase At12D13_RS17275 PF02310 B12 binding domain At12D13_RS17280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At12D13_RS17280 PF00364 Biotin-requiring enzyme At12D13_RS17280 PF00289 Biotin carboxylase, N-terminal domain At12D13_RS17280 PF02785 Biotin carboxylase C-terminal domain At12D13_RS17280 PF18140 Propionyl-coenzyme A carboxylase BT domain At12D13_RS17290 PF02798 Glutathione S-transferase, N-terminal domain At12D13_RS17295 PF01039 Carboxyl transferase domain At12D13_RS17300 PF01381 Helix-turn-helix At12D13_RS17300 PF06114 IrrE N-terminal-like domain At12D13_RS17300 PF09856 Predicted transcriptional regulator (DUF2083) At12D13_RS17305 PF12833 Helix-turn-helix domain At12D13_RS17305 PF00730 HhH-GPD superfamily base excision DNA repair protein At12D13_RS17305 PF06029 AlkA N-terminal domain At12D13_RS17305 PF02805 Metal binding domain of Ada At12D13_RS17310 PF00749 tRNA synthetases class I (E and Q), catalytic domain At12D13_RS17320 PF00106 short chain dehydrogenase At12D13_RS17330 PF01923 Cobalamin adenosyltransferase At12D13_RS17340 PF01012 Electron transfer flavoprotein domain At12D13_RS17345 PF01012 Electron transfer flavoprotein domain At12D13_RS17345 PF00766 Electron transfer flavoprotein FAD-binding domain At12D13_RS17350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain At12D13_RS17350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain At12D13_RS17355 PF08534 Redoxin At12D13_RS17360 PF14698 Argininosuccinate lyase C-terminal At12D13_RS17360 PF00206 Lyase At12D13_RS17370 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At12D13_RS17370 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain At12D13_RS17380 PF00072 Response regulator receiver domain At12D13_RS17385 PF00156 Phosphoribosyl transferase domain At12D13_RS17395 PF00005 ABC transporter At12D13_RS17415 PF04752 ChaC-like protein At12D13_RS17430 PF02153 Prephenate dehydrogenase At12D13_RS17435 PF00155 Aminotransferase class I and II At12D13_RS17440 PF01209 ubiE/COQ5 methyltransferase family At12D13_RS17445 PF00753 Metallo-beta-lactamase superfamily At12D13_RS17445 PF16123 Hydroxyacylglutathione hydrolase C-terminus At12D13_RS17460 PF00830 Ribosomal L28 family At12D13_RS17465 PF02592 Putative vitamin uptake transporter At12D13_RS17475 PF11775 Cobalamin biosynthesis protein CobT VWA domain At12D13_RS17475 PF06213 Cobalamin biosynthesis protein CobT At12D13_RS17480 PF12556 Cobaltochelatase CobS subunit N terminal At12D13_RS17480 PF07728 AAA domain (dynein-related subfamily) At12D13_RS17480 PF08406 CbbQ/NirQ/NorQ C-terminal At12D13_RS17485 PF00226 DnaJ domain At12D13_RS17490 PF01722 BolA-like protein At12D13_RS17495 PF01761 3-dehydroquinate synthase At12D13_RS17500 PF01202 Shikimate kinase At12D13_RS17515 PF00589 Phage integrase family At12D13_RS17515 PF02899 Phage integrase, N-terminal SAM-like domain At12D13_RS17520 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit At12D13_RS17525 PF03734 L,D-transpeptidase catalytic domain At12D13_RS17530 PF00581 Rhodanese-like domain At12D13_RS17530 PF01206 Sulfurtransferase TusA At12D13_RS17540 PF02492 CobW/HypB/UreG, nucleotide-binding domain At12D13_RS17540 PF07683 Cobalamin synthesis protein cobW C-terminal domain At12D13_RS17545 PF00768 D-alanyl-D-alanine carboxypeptidase At12D13_RS17545 PF07943 Penicillin-binding protein 5, C-terminal domain At12D13_RS17550 PF07687 Peptidase dimerisation domain At12D13_RS17550 PF01546 Peptidase family M20/M25/M40 At12D13_RS17560 PF02082 Transcriptional regulator At12D13_RS17565 PF02261 Aspartate decarboxylase At12D13_RS17575 PF01554 MatE At12D13_RS17580 PF00501 AMP-binding enzyme At12D13_RS17580 PF13193 AMP-binding enzyme C-terminal domain At12D13_RS17580 PF00668 Condensation domain At12D13_RS17580 PF07993 Male sterility protein At12D13_RS17580 PF00550 Phosphopantetheine attachment site At12D13_RS17590 PF02801 Beta-ketoacyl synthase, C-terminal domain At12D13_RS17590 PF00109 Beta-ketoacyl synthase, N-terminal domain At12D13_RS17590 PF16197 Ketoacyl-synthetase C-terminal extension At12D13_RS17590 PF00668 Condensation domain At12D13_RS17590 PF00550 Phosphopantetheine attachment site At12D13_RS17590 PF00698 Acyl transferase domain At12D13_RS17595 PF00501 AMP-binding enzyme At12D13_RS17605 PF00501 AMP-binding enzyme At12D13_RS17605 PF13193 AMP-binding enzyme C-terminal domain At12D13_RS17605 PF00668 Condensation domain At12D13_RS17605 PF00550 Phosphopantetheine attachment site At12D13_RS17610 PF13649 Methyltransferase domain At12D13_RS17615 PF00202 Aminotransferase class-III At12D13_RS17615 PF00501 AMP-binding enzyme At12D13_RS17615 PF00668 Condensation domain At12D13_RS17615 PF02801 Beta-ketoacyl synthase, C-terminal domain At12D13_RS17615 PF00550 Phosphopantetheine attachment site At12D13_RS17615 PF16197 Ketoacyl-synthetase C-terminal extension At12D13_RS17615 PF00109 Beta-ketoacyl synthase, N-terminal domain At12D13_RS17615 PF13193 AMP-binding enzyme C-terminal domain At12D13_RS17635 PF02801 Beta-ketoacyl synthase, C-terminal domain At12D13_RS17635 PF00109 Beta-ketoacyl synthase, N-terminal domain At12D13_RS17635 PF16197 Ketoacyl-synthetase C-terminal extension At12D13_RS17635 PF00668 Condensation domain At12D13_RS17635 PF00698 Acyl transferase domain At12D13_RS17635 PF00550 Phosphopantetheine attachment site At12D13_RS17640 PF00668 Condensation domain At12D13_RS17640 PF00550 Phosphopantetheine attachment site At12D13_RS17640 PF13193 AMP-binding enzyme C-terminal domain At12D13_RS17640 PF00501 AMP-binding enzyme At12D13_RS17645 PF00550 Phosphopantetheine attachment site At12D13_RS17645 PF00501 AMP-binding enzyme At12D13_RS17645 PF13193 AMP-binding enzyme C-terminal domain At12D13_RS17645 PF00668 Condensation domain At12D13_RS17650 PF00550 Phosphopantetheine attachment site At12D13_RS17650 PF00668 Condensation domain At12D13_RS17650 PF13193 AMP-binding enzyme C-terminal domain At12D13_RS17650 PF00668 Condensation domain At12D13_RS17650 PF13193 AMP-binding enzyme C-terminal domain At12D13_RS17650 PF00501 AMP-binding enzyme At12D13_RS17650 PF00550 Phosphopantetheine attachment site At12D13_RS17650 PF07993 Male sterility protein At12D13_RS17650 PF00501 AMP-binding enzyme At12D13_RS17650 PF07993 Male sterility protein At12D13_RS17665 PF07715 TonB-dependent Receptor Plug Domain At12D13_RS17670 PF01497 Periplasmic binding protein At12D13_RS17675 PF01032 FecCD transport family At12D13_RS17680 PF01032 FecCD transport family At12D13_RS17685 PF00005 ABC transporter At12D13_RS17700 PF06832 Penicillin-Binding Protein C-terminus Family At12D13_RS17700 PF00912 Transglycosylase At12D13_RS17700 PF00905 Penicillin binding protein transpeptidase domain At12D13_RS17705 PF07678 A-macroglobulin TED domain At12D13_RS17705 PF17962 Bacterial macroglobulin domain 6 At12D13_RS17705 PF07703 Alpha-2-macroglobulin bait region domain At12D13_RS17705 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain At12D13_RS17705 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain At12D13_RS17705 PF01835 MG2 domain At12D13_RS17705 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain At12D13_RS17705 PF00207 Alpha-2-macroglobulin family At12D13_RS17705 PF11974 Bacterial alpha-2-macroglobulin MG3 domain At12D13_RS17710 PF03966 Trm112p-like protein At12D13_RS17720 PF00085 Thioredoxin At12D13_RS17735 PF02798 Glutathione S-transferase, N-terminal domain At12D13_RS17760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_RS17760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_RS17760 PF01842 ACT domain At12D13_RS17770 PF13505 Outer membrane protein beta-barrel domain At12D13_RS17775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I At12D13_RS17775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain At12D13_RS17775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III At12D13_RS17775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II At12D13_RS17780 PF17862 AAA+ lid domain At12D13_RS17780 PF00004 ATPase family associated with various cellular activities (AAA) At12D13_RS17780 PF06480 FtsH Extracellular At12D13_RS17780 PF01434 Peptidase family M41 At12D13_RS17785 PF01171 PP-loop family At12D13_RS17795 PF00691 OmpA family At12D13_RS17800 PF04052 TolB amino-terminal domain At12D13_RS17800 PF07676 WD40-like Beta Propeller Repeat At12D13_RS17810 PF02472 Biopolymer transport protein ExbD/TolR At12D13_RS17815 PF01618 MotA/TolQ/ExbB proton channel family At12D13_RS17820 PF03061 Thioesterase superfamily At12D13_RS17825 PF00293 NUDIX domain At12D13_RS17830 PF00293 NUDIX domain At12D13_RS17845 PF05491 RuvB C-terminal winged helix domain At12D13_RS17845 PF17864 RuvB AAA lid domain At12D13_RS17845 PF05496 Holliday junction DNA helicase RuvB P-loop domain At12D13_RS17850 PF01330 RuvA N terminal domain At12D13_RS17850 PF07499 RuvA, C-terminal domain At12D13_RS17855 PF02075 Crossover junction endodeoxyribonuclease RuvC At12D13_RS17860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS17860 PF00672 HAMP domain At12D13_RS17865 PF00296 Luciferase-like monooxygenase At12D13_RS17870 PF01709 Transcriptional regulator At12D13_RS17885 PF13277 YmdB-like protein At12D13_RS17895 PF03471 Transporter associated domain At12D13_RS17895 PF01595 Cyclin M transmembrane N-terminal domain At12D13_RS17895 PF00571 CBS domain At12D13_RS17920 PF02779 Transketolase, pyrimidine binding domain At12D13_RS17920 PF00456 Transketolase, thiamine diphosphate binding domain At12D13_RS17920 PF02780 Transketolase, C-terminal domain At12D13_RS17925 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain At12D13_RS17925 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain At12D13_RS17930 PF00999 Sodium/hydrogen exchanger family At12D13_RS17930 PF03471 Transporter associated domain At12D13_RS17930 PF02080 TrkA-C domain At12D13_RS17935 PF00162 Phosphoglycerate kinase At12D13_RS17940 PF00274 Fructose-bisphosphate aldolase class-I At12D13_RS17960 PF01197 Ribosomal protein L31 At12D13_RS17965 PF00664 ABC transporter transmembrane region At12D13_RS17965 PF00005 ABC transporter At12D13_RS17970 PF00890 FAD binding domain At12D13_RS17980 PF01389 OmpA-like transmembrane domain At12D13_RS17980 PF00691 OmpA family At12D13_RS17990 PF00459 Inositol monophosphatase family At12D13_RS18020 PF00731 AIR carboxylase At12D13_RS18025 PF02222 ATP-grasp domain At12D13_RS18025 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain At12D13_RS18030 PF00444 Ribosomal protein L36 At12D13_RS18040 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) At12D13_RS18060 PF00224 Pyruvate kinase, barrel domain At12D13_RS18060 PF02887 Pyruvate kinase, alpha/beta domain At12D13_RS18065 PF05951 Bacterial protein of unknown function (DUF882) At12D13_RS18070 PF02954 Bacterial regulatory protein, Fis family At12D13_RS18070 PF00072 Response regulator receiver domain At12D13_RS18070 PF00158 Sigma-54 interaction domain At12D13_RS18075 PF01432 Peptidase family M3 At12D13_RS18075 PF08439 Oligopeptidase F At12D13_RS18080 PF01063 Amino-transferase class IV At12D13_RS18085 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS18090 PF16653 Saccharopine dehydrogenase C-terminal domain At12D13_RS18090 PF03435 Saccharopine dehydrogenase NADP binding domain At12D13_RS18100 PF02872 5'-nucleotidase, C-terminal domain At12D13_RS18100 PF00149 Calcineurin-like phosphoesterase At12D13_RS18105 PF00762 Ferrochelatase At12D13_RS18110 PF01145 SPFH domain / Band 7 family At12D13_RS18110 PF16200 C-terminal region of band_7 At12D13_RS18120 PF01380 SIS domain At12D13_RS18120 PF00571 CBS domain At12D13_RS18140 PF00483 Nucleotidyl transferase At12D13_RS18145 PF13406 Transglycosylase SLT domain At12D13_RS18155 PF00072 Response regulator receiver domain At12D13_RS18155 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS18160 PF00672 HAMP domain At12D13_RS18160 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS18160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS18165 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster At12D13_RS18165 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_RS18170 PF00310 Glutamine amidotransferases class-II At12D13_RS18170 PF04898 Glutamate synthase central domain At12D13_RS18170 PF01645 Conserved region in glutamate synthase At12D13_RS18170 PF01493 GXGXG motif At12D13_RS18175 PF01212 Beta-eliminating lyase At12D13_RS18180 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS18180 PF00072 Response regulator receiver domain At12D13_RS18185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS18185 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS18185 PF13492 GAF domain At12D13_RS18185 PF02702 Osmosensitive K+ channel His kinase sensor domain At12D13_RS18185 PF13493 Domain of unknown function (DUF4118) At12D13_RS18190 PF02669 K+-transporting ATPase, c chain At12D13_RS18200 PF03814 Potassium-transporting ATPase A subunit At12D13_RS18210 PF17763 Glutaminase/Asparaginase C-terminal domain At12D13_RS18210 PF00710 Asparaginase, N-terminal At12D13_RS18215 PF00324 Amino acid permease At12D13_RS18220 PF10415 Fumarase C C-terminus At12D13_RS18220 PF00206 Lyase At12D13_RS18225 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS18225 PF07729 FCD domain At12D13_RS18230 PF00873 AcrB/AcrD/AcrF family At12D13_RS18240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At12D13_RS18240 PF00529 HlyD membrane-fusion protein of T1SS At12D13_RS18250 PF07702 UTRA domain At12D13_RS18250 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS18260 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS18265 PF00005 ABC transporter At12D13_RS18265 PF00571 CBS domain At12D13_RS18270 PF00221 Aromatic amino acid lyase At12D13_RS18275 PF07690 Major Facilitator Superfamily At12D13_RS18285 PF01053 Cys/Met metabolism PLP-dependent enzyme At12D13_RS18290 PF01037 Lrp/AsnC ligand binding domain At12D13_RS18295 PF03466 LysR substrate binding domain At12D13_RS18295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS18300 PF00248 Aldo/keto reductase family At12D13_RS18305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS18305 PF03466 LysR substrate binding domain At12D13_RS18310 PF00857 Isochorismatase family At12D13_RS18325 PF05336 L-rhamnose mutarotase At12D13_RS18330 PF07729 FCD domain At12D13_RS18330 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS18335 PF00248 Aldo/keto reductase family At12D13_RS18340 PF08666 SAF domain At12D13_RS18340 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus At12D13_RS18345 PF00005 ABC transporter At12D13_RS18350 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS18355 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS18360 PF13407 Periplasmic binding protein domain At12D13_RS18370 PF01717 Cobalamin-independent synthase, Catalytic domain At12D13_RS18370 PF08267 Cobalamin-independent synthase, N-terminal domain At12D13_RS18385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS18385 PF03466 LysR substrate binding domain At12D13_RS18395 PF03466 LysR substrate binding domain At12D13_RS18395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS18415 PF03061 Thioesterase superfamily At12D13_RS18435 PF14403 Circularly permuted ATP-grasp type 2 At12D13_RS18435 PF04168 A predicted alpha-helical domain with a conserved ER motif. At12D13_RS18440 PF01841 Transglutaminase-like superfamily At12D13_RS18440 PF08379 Bacterial transglutaminase-like N-terminal region At12D13_RS18450 PF00005 ABC transporter At12D13_RS18450 PF12848 ABC transporter At12D13_RS18455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_RS18455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_RS18460 PF01070 FMN-dependent dehydrogenase At12D13_RS18470 PF01047 MarR family At12D13_RS18480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At12D13_RS18480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At12D13_RS18485 PF01791 DeoC/LacD family aldolase At12D13_RS18490 PF16901 C-terminal domain of alpha-glycerophosphate oxidase At12D13_RS18490 PF01266 FAD dependent oxidoreductase At12D13_RS18495 PF00248 Aldo/keto reductase family At12D13_RS18505 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS18510 PF00005 ABC transporter At12D13_RS18515 PF13407 Periplasmic binding protein domain At12D13_RS18525 PF00072 Response regulator receiver domain At12D13_RS18535 PF00459 Inositol monophosphatase family At12D13_RS18550 PF00011 Hsp20/alpha crystallin family At12D13_RS18555 PF13593 SBF-like CPA transporter family (DUF4137) At12D13_RS18560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS18560 PF03466 LysR substrate binding domain At12D13_RS18565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At12D13_RS18565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At12D13_RS18580 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS18585 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS18590 PF17912 MalK OB fold domain At12D13_RS18590 PF00005 ABC transporter At12D13_RS18595 PF00005 ABC transporter At12D13_RS18595 PF03459 TOBE domain At12D13_RS18595 PF17912 MalK OB fold domain At12D13_RS18600 PF01266 FAD dependent oxidoreductase At12D13_RS18600 PF16901 C-terminal domain of alpha-glycerophosphate oxidase At12D13_RS18605 PF08220 DeoR-like helix-turn-helix domain At12D13_RS18605 PF00455 DeoR C terminal sensor domain At12D13_RS18610 PF10414 Sirohaem synthase dimerisation region At12D13_RS18610 PF14824 Sirohaem biosynthesis protein central At12D13_RS18610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At12D13_RS18615 PF01568 Molydopterin dinucleotide binding domain At12D13_RS18615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At12D13_RS18615 PF00384 Molybdopterin oxidoreductase At12D13_RS18615 PF04324 BFD-like [2Fe-2S] binding domain At12D13_RS18630 PF18267 Rubredoxin NAD+ reductase C-terminal domain At12D13_RS18630 PF04324 BFD-like [2Fe-2S] binding domain At12D13_RS18630 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_RS18630 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain At12D13_RS18630 PF01077 Nitrite and sulphite reductase 4Fe-4S domain At12D13_RS18635 PF00005 ABC transporter At12D13_RS18640 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS18655 PF08376 Nitrate and nitrite sensing At12D13_RS18655 PF03861 ANTAR domain At12D13_RS18660 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS18660 PF07729 FCD domain At12D13_RS18665 PF01566 Natural resistance-associated macrophage protein At12D13_RS18670 PF03746 LamB/YcsF family At12D13_RS18675 PF07286 Protein of unknown function (DUF1445) At12D13_RS18680 PF02626 Carboxyltransferase domain, subdomain A and B At12D13_RS18685 PF00289 Biotin carboxylase, N-terminal domain At12D13_RS18685 PF00364 Biotin-requiring enzyme At12D13_RS18685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At12D13_RS18685 PF02785 Biotin carboxylase C-terminal domain At12D13_RS18690 PF02806 Alpha amylase, C-terminal all-beta domain At12D13_RS18690 PF00128 Alpha amylase, catalytic domain At12D13_RS18695 PF09278 MerR, DNA binding At12D13_RS18695 PF00376 MerR family regulatory protein At12D13_RS18700 PF00593 TonB dependent receptor At12D13_RS18700 PF07715 TonB-dependent Receptor Plug Domain At12D13_RS18705 PF02885 Glycosyl transferase family, helical bundle domain At12D13_RS18705 PF00591 Glycosyl transferase family, a/b domain At12D13_RS18710 PF06772 Bacterial low temperature requirement A protein (LtrA) At12D13_RS18730 PF03428 Replication protein C N-terminal domain At12D13_RS18730 PF11800 Replication protein C C-terminal region At12D13_RS18735 PF02195 ParB-like nuclease domain At12D13_RS18735 PF07506 RepB plasmid partitioning protein At12D13_RS18740 PF13614 AAA domain At12D13_RS18750 PF01042 Endoribonuclease L-PSP At12D13_RS18755 PF01168 Alanine racemase, N-terminal domain At12D13_RS18755 PF14031 Putative serine dehydratase domain At12D13_RS18760 PF07171 MlrC C-terminus At12D13_RS18760 PF07364 Metallopeptidase family M81 At12D13_RS18765 PF05962 HutD At12D13_RS18775 PF01175 Urocanase Rossmann-like domain At12D13_RS18775 PF17391 Urocanase N-terminal domain At12D13_RS18775 PF17392 Urocanase C-terminal domain At12D13_RS18790 PF00221 Aromatic amino acid lyase At12D13_RS18795 PF01979 Amidohydrolase family At12D13_RS18800 PF01979 Amidohydrolase family At12D13_RS18860 PF01266 FAD dependent oxidoreductase At12D13_RS18865 PF01168 Alanine racemase, N-terminal domain At12D13_RS18865 PF14031 Putative serine dehydratase domain At12D13_RS18870 PF02423 Ornithine cyclodeaminase/mu-crystallin family At12D13_RS18875 PF00171 Aldehyde dehydrogenase family At12D13_RS18880 PF03466 LysR substrate binding domain At12D13_RS18880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS18885 PF01266 FAD dependent oxidoreductase At12D13_RS18890 PF05544 Proline racemase At12D13_RS18895 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS18900 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS18905 PF00571 CBS domain At12D13_RS18905 PF00005 ABC transporter At12D13_RS18915 PF01266 FAD dependent oxidoreductase At12D13_RS18920 PF00171 Aldehyde dehydrogenase family At12D13_RS18925 PF00701 Dihydrodipicolinate synthetase family At12D13_RS18945 PF07729 FCD domain At12D13_RS18945 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS18950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS18950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS18955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS18955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS18960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS18960 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS18970 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS18975 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS18980 PF17912 MalK OB fold domain At12D13_RS18980 PF03459 TOBE domain At12D13_RS18980 PF00005 ABC transporter At12D13_RS18985 PF00920 Dehydratase family At12D13_RS18990 PF01370 NAD dependent epimerase/dehydratase family At12D13_RS18995 PF03737 Aldolase/RraA At12D13_RS19005 PF03275 UDP-galactopyranose mutase At12D13_RS19020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS19020 PF03466 LysR substrate binding domain At12D13_RS19025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At12D13_RS19040 PF07969 Amidohydrolase family At12D13_RS19050 PF05977 Transmembrane secretion effector At12D13_RS19065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS19065 PF03466 LysR substrate binding domain At12D13_RS19070 PF07690 Major Facilitator Superfamily At12D13_RS19115 PF13673 Acetyltransferase (GNAT) domain At12D13_RS19125 PF06968 Biotin and Thiamin Synthesis associated domain At12D13_RS19125 PF04055 Radical SAM superfamily At12D13_RS19130 PF00155 Aminotransferase class I and II At12D13_RS19140 PF00202 Aminotransferase class-III At12D13_RS19145 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III At12D13_RS19145 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal At12D13_RS19175 PF00491 Arginase family At12D13_RS19180 PF02423 Ornithine cyclodeaminase/mu-crystallin family At12D13_RS19185 PF00892 EamA-like transporter family At12D13_RS19190 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS19190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS19200 PF00211 Adenylate and Guanylate cyclase catalytic domain At12D13_RS19210 PF11972 HTH DNA binding domain At12D13_RS19210 PF07756 Protein of unknown function (DUF1612) At12D13_RS19215 PF00083 Sugar (and other) transporter At12D13_RS19220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS19220 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS19225 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS19225 PF00072 Response regulator receiver domain At12D13_RS19230 PF08019 Phosphoethanolamine transferase EptA/EptB At12D13_RS19230 PF00884 Sulfatase At12D13_RS19240 PF03466 LysR substrate binding domain At12D13_RS19240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS19245 PF00593 TonB dependent receptor At12D13_RS19245 PF07715 TonB-dependent Receptor Plug Domain At12D13_RS19255 PF01032 FecCD transport family At12D13_RS19260 PF00005 ABC transporter At12D13_RS19270 PF00034 Cytochrome c At12D13_RS19275 PF02631 RecX family At12D13_RS19280 PF08450 SMP-30/Gluconolactonase/LRE-like region At12D13_RS19290 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS19295 PF00005 ABC transporter At12D13_RS19300 PF13407 Periplasmic binding protein domain At12D13_RS19310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS19310 PF07730 Histidine kinase At12D13_RS19315 PF00196 Bacterial regulatory proteins, luxR family At12D13_RS19315 PF00072 Response regulator receiver domain At12D13_RS19325 PF07995 Glucose / Sorbosone dehydrogenase At12D13_RS19335 PF04445 Putative SAM-dependent methyltransferase At12D13_RS19340 PF00849 RNA pseudouridylate synthase At12D13_RS19345 PF01205 Uncharacterized protein family UPF0029 At12D13_RS19350 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_RS19350 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At12D13_RS19355 PF00571 CBS domain At12D13_RS19355 PF00005 ABC transporter At12D13_RS19360 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS19370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS19370 PF13426 PAS domain At12D13_RS19370 PF00072 Response regulator receiver domain At12D13_RS19375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_RS19380 PF13807 G-rich domain on putative tyrosine kinase At12D13_RS19380 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At12D13_RS19380 PF02706 Chain length determinant protein At12D13_RS19385 PF00483 Nucleotidyl transferase At12D13_RS19390 PF00535 Glycosyl transferase family 2 At12D13_RS19395 PF00535 Glycosyl transferase family 2 At12D13_RS19405 PF00722 Glycosyl hydrolases family 16 At12D13_RS19410 PF01757 Acyltransferase family At12D13_RS19415 PF01943 Polysaccharide biosynthesis protein At12D13_RS19420 PF00535 Glycosyl transferase family 2 At12D13_RS19425 PF04230 Polysaccharide pyruvyl transferase At12D13_RS19430 PF00535 Glycosyl transferase family 2 At12D13_RS19435 PF11089 Exopolysaccharide production repressor At12D13_RS19450 PF01165 Ribosomal protein S21 At12D13_RS19460 PF01266 FAD dependent oxidoreductase At12D13_RS19475 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_RS19475 PF17806 Sarcosine oxidase A3 domain At12D13_RS19475 PF08669 Glycine cleavage T-protein C-terminal barrel domain At12D13_RS19475 PF01571 Aminomethyltransferase folate-binding domain At12D13_RS19490 PF01575 MaoC like domain At12D13_RS19495 PF18390 Glycogen debranching enzyme C-terminal domain At12D13_RS19495 PF00128 Alpha amylase, catalytic domain At12D13_RS19495 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At12D13_RS19500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain At12D13_RS19500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III At12D13_RS19500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II At12D13_RS19500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I At12D13_RS19505 PF00534 Glycosyl transferases group 1 At12D13_RS19505 PF08323 Starch synthase catalytic domain At12D13_RS19510 PF00483 Nucleotidyl transferase At12D13_RS19515 PF02806 Alpha amylase, C-terminal all-beta domain At12D13_RS19515 PF00128 Alpha amylase, catalytic domain At12D13_RS19515 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At12D13_RS19520 PF00343 Carbohydrate phosphorylase At12D13_RS19535 PF01177 Asp/Glu/Hydantoin racemase At12D13_RS19540 PF01037 Lrp/AsnC ligand binding domain At12D13_RS19550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At12D13_RS19550 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At12D13_RS19560 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS19560 PF00107 Zinc-binding dehydrogenase At12D13_RS19570 PF00664 ABC transporter transmembrane region At12D13_RS19570 PF00005 ABC transporter At12D13_RS19575 PF00005 ABC transporter At12D13_RS19575 PF00664 ABC transporter transmembrane region At12D13_RS19580 PF01654 Cytochrome bd terminal oxidase subunit I At12D13_RS19585 PF02322 Cytochrome bd terminal oxidase subunit II At12D13_RS19590 PF08173 Membrane bound YbgT-like protein At12D13_RS19610 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain At12D13_RS19610 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain At12D13_RS19615 PF02910 Fumarate reductase flavoprotein C-term At12D13_RS19615 PF00890 FAD binding domain At12D13_RS19620 PF02445 Quinolinate synthetase A protein At12D13_RS19650 PF02224 Cytidylate kinase At12D13_RS19655 PF00575 S1 RNA binding domain At12D13_RS19685 PF00106 short chain dehydrogenase At12D13_RS19695 PF00557 Metallopeptidase family M24 At12D13_RS19695 PF01321 Creatinase/Prolidase N-terminal domain At12D13_RS19700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS19705 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS19710 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS19710 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS19715 PF00005 ABC transporter At12D13_RS19715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS19720 PF00005 ABC transporter At12D13_RS19720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS19725 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS19725 PF07729 FCD domain At12D13_RS19730 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_RS19730 PF13378 Enolase C-terminal domain-like At12D13_RS19735 PF00296 Luciferase-like monooxygenase At12D13_RS19750 PF00005 ABC transporter At12D13_RS19750 PF12399 Branched-chain amino acid ATP-binding cassette transporter At12D13_RS19755 PF00005 ABC transporter At12D13_RS19760 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS19765 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS19765 PF11862 Domain of unknown function (DUF3382) At12D13_RS19770 PF00732 GMC oxidoreductase At12D13_RS19770 PF05199 GMC oxidoreductase At12D13_RS19775 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At12D13_RS19775 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At12D13_RS19780 PF00501 AMP-binding enzyme At12D13_RS19780 PF13193 AMP-binding enzyme C-terminal domain At12D13_RS19805 PF01011 PQQ enzyme repeat At12D13_RS19810 PF05974 Domain of unknown function (DUF892) At12D13_RS19820 PF03275 UDP-galactopyranose mutase At12D13_RS19840 PF01965 DJ-1/PfpI family At12D13_RS19865 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain At12D13_RS19865 PF02951 Prokaryotic glutathione synthetase, N-terminal domain At12D13_RS19870 PF16363 GDP-mannose 4,6 dehydratase At12D13_RS19875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain At12D13_RS19875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain At12D13_RS19875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain At12D13_RS19885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS19885 PF03466 LysR substrate binding domain At12D13_RS19890 PF00171 Aldehyde dehydrogenase family At12D13_RS19895 PF09084 NMT1/THI5 like At12D13_RS19900 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS19905 PF00005 ABC transporter At12D13_RS19910 PF01619 Proline dehydrogenase At12D13_RS19910 PF14850 DNA-binding domain of Proline dehydrogenase At12D13_RS19910 PF18327 Proline utilization A proline dehydrogenase N-terminal domain At12D13_RS19910 PF00171 Aldehyde dehydrogenase family At12D13_RS19920 PF01037 Lrp/AsnC ligand binding domain At12D13_RS19925 PF08281 Sigma-70, region 4 At12D13_RS19925 PF04542 Sigma-70 region 2 At12D13_RS19935 PF00072 Response regulator receiver domain At12D13_RS19940 PF07536 HWE histidine kinase At12D13_RS19940 PF08447 PAS fold At12D13_RS19940 PF13426 PAS domain At12D13_RS19945 PF13581 Histidine kinase-like ATPase domain At12D13_RS19945 PF07536 HWE histidine kinase At12D13_RS19945 PF13426 PAS domain At12D13_RS19955 PF16363 GDP-mannose 4,6 dehydratase At12D13_RS19970 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At12D13_RS19975 PF03435 Saccharopine dehydrogenase NADP binding domain At12D13_RS19975 PF16653 Saccharopine dehydrogenase C-terminal domain At12D13_RS19980 PF00270 DEAD/DEAH box helicase At12D13_RS19980 PF00271 Helicase conserved C-terminal domain At12D13_RS19990 PF00696 Amino acid kinase family At12D13_RS19990 PF01842 ACT domain At12D13_RS19990 PF13840 ACT domain At12D13_RS19995 PF00391 PEP-utilising enzyme, mobile domain At12D13_RS19995 PF01590 GAF domain At12D13_RS19995 PF05524 PEP-utilising enzyme, N-terminal At12D13_RS19995 PF02896 PEP-utilising enzyme, TIM barrel domain At12D13_RS20000 PF03462 PCRF domain At12D13_RS20000 PF00472 RF-1 domain At12D13_RS20005 PF05175 Methyltransferase small domain At12D13_RS20005 PF17827 PrmC N-terminal domain At12D13_RS20015 PF10431 C-terminal, D2-small domain, of ClpB protein At12D13_RS20015 PF02861 Clp amino terminal domain, pathogenicity island component At12D13_RS20015 PF17871 AAA lid domain At12D13_RS20015 PF07724 AAA domain (Cdc48 subfamily) At12D13_RS20015 PF00004 ATPase family associated with various cellular activities (AAA) At12D13_RS20020 PF10145 Phage-related minor tail protein At12D13_RS20020 PF01464 Transglycosylase SLT domain At12D13_RS20020 PF01551 Peptidase family M23 At12D13_RS20065 PF00701 Dihydrodipicolinate synthetase family At12D13_RS20070 PF08450 SMP-30/Gluconolactonase/LRE-like region At12D13_RS20075 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS20075 PF07729 FCD domain At12D13_RS20080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS20085 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS20090 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS20090 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS20095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS20095 PF00005 ABC transporter At12D13_RS20100 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_RS20100 PF13378 Enolase C-terminal domain-like At12D13_RS20120 PF03466 LysR substrate binding domain At12D13_RS20120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS20125 PF03746 LamB/YcsF family At12D13_RS20130 PF00364 Biotin-requiring enzyme At12D13_RS20135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At12D13_RS20135 PF00289 Biotin carboxylase, N-terminal domain At12D13_RS20135 PF02785 Biotin carboxylase C-terminal domain At12D13_RS20145 PF02626 Carboxyltransferase domain, subdomain A and B At12D13_RS20155 PF00005 ABC transporter At12D13_RS20155 PF08402 TOBE domain At12D13_RS20160 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS20185 PF08402 TOBE domain At12D13_RS20185 PF00005 ABC transporter At12D13_RS20190 PF01522 Polysaccharide deacetylase At12D13_RS20200 PF07683 Cobalamin synthesis protein cobW C-terminal domain At12D13_RS20200 PF02492 CobW/HypB/UreG, nucleotide-binding domain At12D13_RS20210 PF01425 Amidase At12D13_RS20230 PF03358 NADPH-dependent FMN reductase At12D13_RS20235 PF13649 Methyltransferase domain At12D13_RS20240 PF01161 Phosphatidylethanolamine-binding protein At12D13_RS20255 PF00440 Bacterial regulatory proteins, tetR family At12D13_RS20255 PF02909 Tetracyclin repressor-like, C-terminal domain At12D13_RS20260 PF07690 Major Facilitator Superfamily At12D13_RS20280 PF00313 'Cold-shock' DNA-binding domain At12D13_RS20295 PF00109 Beta-ketoacyl synthase, N-terminal domain At12D13_RS20295 PF02801 Beta-ketoacyl synthase, C-terminal domain At12D13_RS20310 PF00873 AcrB/AcrD/AcrF family At12D13_RS20315 PF00106 short chain dehydrogenase At12D13_RS20325 PF08669 Glycine cleavage T-protein C-terminal barrel domain At12D13_RS20325 PF01571 Aminomethyltransferase folate-binding domain At12D13_RS20325 PF17806 Sarcosine oxidase A3 domain At12D13_RS20325 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_RS20330 PF04267 Sarcosine oxidase, delta subunit family At12D13_RS20335 PF01266 FAD dependent oxidoreductase At12D13_RS20340 PF12833 Helix-turn-helix domain At12D13_RS20340 PF01965 DJ-1/PfpI family At12D13_RS20355 PF01493 GXGXG motif At12D13_RS20360 PF01645 Conserved region in glutamate synthase At12D13_RS20365 PF00120 Glutamine synthetase, catalytic domain At12D13_RS20370 PF00551 Formyl transferase At12D13_RS20375 PF07729 FCD domain At12D13_RS20375 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS20385 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS20390 PF00005 ABC transporter At12D13_RS20395 PF00465 Iron-containing alcohol dehydrogenase At12D13_RS20405 PF12697 Alpha/beta hydrolase family At12D13_RS20410 PF01613 Flavin reductase like domain At12D13_RS20415 PF00296 Luciferase-like monooxygenase At12D13_RS20420 PF00171 Aldehyde dehydrogenase family At12D13_RS20435 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS20440 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS20445 PF08402 TOBE domain At12D13_RS20445 PF00005 ABC transporter At12D13_RS20450 PF00171 Aldehyde dehydrogenase family At12D13_RS20460 PF17912 MalK OB fold domain At12D13_RS20460 PF00005 ABC transporter At12D13_RS20460 PF03459 TOBE domain At12D13_RS20465 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS20470 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS20480 PF00890 FAD binding domain At12D13_RS20480 PF04205 FMN-binding domain At12D13_RS20485 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS20485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family At12D13_RS20495 PF00005 ABC transporter At12D13_RS20495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS20500 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS20500 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS20505 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS20510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS20515 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS20520 PF00005 ABC transporter At12D13_RS20530 PF04303 PrpF protein At12D13_RS20535 PF03466 LysR substrate binding domain At12D13_RS20535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS20545 PF00155 Aminotransferase class I and II At12D13_RS20545 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS20555 PF01810 LysE type translocator At12D13_RS20560 PF02567 Phenazine biosynthesis-like protein At12D13_RS20565 PF00293 NUDIX domain At12D13_RS20570 PF03466 LysR substrate binding domain At12D13_RS20570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS20580 PF00364 Biotin-requiring enzyme At12D13_RS20585 PF00289 Biotin carboxylase, N-terminal domain At12D13_RS20585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At12D13_RS20585 PF02785 Biotin carboxylase C-terminal domain At12D13_RS20600 PF02626 Carboxyltransferase domain, subdomain A and B At12D13_RS20605 PF03746 LamB/YcsF family At12D13_RS20610 PF00155 Aminotransferase class I and II At12D13_RS20615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS20615 PF03466 LysR substrate binding domain At12D13_RS20620 PF00106 short chain dehydrogenase At12D13_RS20625 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS20630 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS20635 PF00005 ABC transporter At12D13_RS20640 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_RS20645 PF03737 Aldolase/RraA At12D13_RS20660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS20660 PF03466 LysR substrate binding domain At12D13_RS20665 PF00107 Zinc-binding dehydrogenase At12D13_RS20665 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS20670 PF03466 LysR substrate binding domain At12D13_RS20670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS20675 PF07690 Major Facilitator Superfamily At12D13_RS20680 PF00296 Luciferase-like monooxygenase At12D13_RS20685 PF00248 Aldo/keto reductase family At12D13_RS20690 PF18317 Shikimate 5'-dehydrogenase C-terminal domain At12D13_RS20690 PF08501 Shikimate dehydrogenase substrate binding domain At12D13_RS20690 PF01488 Shikimate / quinate 5-dehydrogenase At12D13_RS20695 PF05199 GMC oxidoreductase At12D13_RS20695 PF00732 GMC oxidoreductase At12D13_RS20700 PF02311 AraC-like ligand binding domain At12D13_RS20700 PF12833 Helix-turn-helix domain At12D13_RS20705 PF00924 Mechanosensitive ion channel At12D13_RS20715 PF00072 Response regulator receiver domain At12D13_RS20715 PF00196 Bacterial regulatory proteins, luxR family At12D13_RS20735 PF00924 Mechanosensitive ion channel At12D13_RS20740 PF13426 PAS domain At12D13_RS20740 PF13493 Domain of unknown function (DUF4118) At12D13_RS20740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS20740 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS20740 PF00989 PAS fold At12D13_RS20740 PF08447 PAS fold At12D13_RS20745 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) At12D13_RS20745 PF01627 Hpt domain At12D13_RS20745 PF00672 HAMP domain At12D13_RS20745 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS20745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS20745 PF00072 Response regulator receiver domain At12D13_RS20750 PF00753 Metallo-beta-lactamase superfamily At12D13_RS20750 PF16123 Hydroxyacylglutathione hydrolase C-terminus At12D13_RS20760 PF00034 Cytochrome c At12D13_RS20765 PF00116 Cytochrome C oxidase subunit II, periplasmic domain At12D13_RS20770 PF00115 Cytochrome C and Quinol oxidase polypeptide I At12D13_RS20775 PF00510 Cytochrome c oxidase subunit III At12D13_RS20780 PF00510 Cytochrome c oxidase subunit III At12D13_RS20795 PF01266 FAD dependent oxidoreductase At12D13_RS20805 PF01571 Aminomethyltransferase folate-binding domain At12D13_RS20805 PF17806 Sarcosine oxidase A3 domain At12D13_RS20805 PF08669 Glycine cleavage T-protein C-terminal barrel domain At12D13_RS20805 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_RS20815 PF00464 Serine hydroxymethyltransferase At12D13_RS20820 PF00551 Formyl transferase At12D13_RS20830 PF00440 Bacterial regulatory proteins, tetR family At12D13_RS20835 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS20835 PF00107 Zinc-binding dehydrogenase At12D13_RS20840 PF12833 Helix-turn-helix domain At12D13_RS20845 PF13407 Periplasmic binding protein domain At12D13_RS20850 PF00005 ABC transporter At12D13_RS20855 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS20860 PF00106 short chain dehydrogenase At12D13_RS20865 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At12D13_RS20865 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At12D13_RS20875 PF00083 Sugar (and other) transporter At12D13_RS20875 PF08946 Osmosensory transporter coiled coil At12D13_RS20885 PF02563 Polysaccharide biosynthesis/export protein At12D13_RS20900 PF14331 ImcF-related N-terminal domain At12D13_RS20900 PF06744 Type VI secretion protein IcmF C-terminal At12D13_RS20900 PF06761 Intracellular multiplication and human macrophage-killing At12D13_RS20905 PF00691 OmpA family At12D13_RS20910 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE At12D13_RS20925 PF05947 Type VI secretion system, TssF At12D13_RS20945 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath At12D13_RS20950 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 At12D13_RS20960 PF00004 ATPase family associated with various cellular activities (AAA) At12D13_RS20960 PF10431 C-terminal, D2-small domain, of ClpB protein At12D13_RS20960 PF17871 AAA lid domain At12D13_RS20960 PF07724 AAA domain (Cdc48 subfamily) At12D13_RS20980 PF04717 Type VI secretion system, phage-baseplate injector At12D13_RS21000 PF00563 EAL domain At12D13_RS21000 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS21000 PF08447 PAS fold At12D13_RS21000 PF08448 PAS fold At12D13_RS21020 PF03471 Transporter associated domain At12D13_RS21020 PF03741 Integral membrane protein TerC family At12D13_RS21035 PF00005 ABC transporter At12D13_RS21035 PF17912 MalK OB fold domain At12D13_RS21035 PF03459 TOBE domain At12D13_RS21040 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS21045 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS21050 PF13416 Bacterial extracellular solute-binding protein At12D13_RS21055 PF01261 Xylose isomerase-like TIM barrel At12D13_RS21060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS21060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS21065 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS21080 PF13407 Periplasmic binding protein domain At12D13_RS21085 PF00005 ABC transporter At12D13_RS21090 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS21095 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS21100 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS21110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS21110 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS21130 PF00034 Cytochrome c At12D13_RS21145 PF00394 Multicopper oxidase At12D13_RS21145 PF07732 Multicopper oxidase At12D13_RS21165 PF00092 von Willebrand factor type A domain At12D13_RS21170 PF08406 CbbQ/NirQ/NorQ C-terminal At12D13_RS21170 PF07728 AAA domain (dynein-related subfamily) At12D13_RS21175 PF00115 Cytochrome C and Quinol oxidase polypeptide I At12D13_RS21180 PF00034 Cytochrome c At12D13_RS21190 PF00510 Cytochrome c oxidase subunit III At12D13_RS21205 PF02441 Flavoprotein At12D13_RS21210 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase At12D13_RS21215 PF04343 Protein of unknown function, DUF488 At12D13_RS21225 PF01136 Peptidase family U32 At12D13_RS21255 PF00005 ABC transporter At12D13_RS21265 PF06796 Periplasmic nitrate reductase protein NapE At12D13_RS21280 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At12D13_RS21280 PF00384 Molybdopterin oxidoreductase At12D13_RS21280 PF01568 Molydopterin dinucleotide binding domain At12D13_RS21285 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) At12D13_RS21290 PF03264 NapC/NirT cytochrome c family, N-terminal region At12D13_RS21300 PF01648 4'-phosphopantetheinyl transferase superfamily At12D13_RS21300 PF17837 4'-phosphopantetheinyl transferase N-terminal domain At12D13_RS21305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_RS21305 PF02770 Acyl-CoA dehydrogenase, middle domain At12D13_RS21305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At12D13_RS21310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS21310 PF03466 LysR substrate binding domain At12D13_RS21315 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS21325 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS21335 PF00005 ABC transporter At12D13_RS21335 PF08402 TOBE domain At12D13_RS21345 PF13382 Adenine deaminase C-terminal domain At12D13_RS21345 PF01979 Amidohydrolase family At12D13_RS21350 PF03796 DnaB-like helicase C terminal domain At12D13_RS21355 PF07687 Peptidase dimerisation domain At12D13_RS21355 PF01546 Peptidase family M20/M25/M40 At12D13_RS21365 PF01244 Membrane dipeptidase (Peptidase family M19) At12D13_RS21370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS21375 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS21380 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS21380 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS21385 PF00005 ABC transporter At12D13_RS21385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS21390 PF00005 ABC transporter At12D13_RS21390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS21395 PF03466 LysR substrate binding domain At12D13_RS21395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS21400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS21405 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS21410 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS21410 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS21415 PF01425 Amidase At12D13_RS21420 PF01965 DJ-1/PfpI family At12D13_RS21430 PF07687 Peptidase dimerisation domain At12D13_RS21430 PF01546 Peptidase family M20/M25/M40 At12D13_RS21435 PF00005 ABC transporter At12D13_RS21435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS21440 PF04198 Putative sugar-binding domain At12D13_RS21450 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS21455 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS21460 PF00005 ABC transporter At12D13_RS21460 PF08402 TOBE domain At12D13_RS21465 PF01232 Mannitol dehydrogenase Rossmann domain At12D13_RS21465 PF08125 Mannitol dehydrogenase C-terminal domain At12D13_RS21470 PF13419 Haloacid dehalogenase-like hydrolase At12D13_RS21475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At12D13_RS21475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At12D13_RS21480 PF01380 SIS domain At12D13_RS21480 PF01418 Helix-turn-helix domain, rpiR family At12D13_RS21490 PF10576 Iron-sulfur binding domain of endonuclease III At12D13_RS21490 PF00633 Helix-hairpin-helix motif At12D13_RS21490 PF00730 HhH-GPD superfamily base excision DNA repair protein At12D13_RS21505 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain At12D13_RS21505 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain At12D13_RS21520 PF13936 Helix-turn-helix domain At12D13_RS21520 PF04198 Putative sugar-binding domain At12D13_RS21525 PF00923 Transaldolase/Fructose-6-phosphate aldolase At12D13_RS21530 PF09339 IclR helix-turn-helix domain At12D13_RS21530 PF01614 Bacterial transcriptional regulator At12D13_RS21545 PF00950 ABC 3 transport family At12D13_RS21550 PF00950 ABC 3 transport family At12D13_RS21555 PF00005 ABC transporter At12D13_RS21560 PF01297 Zinc-uptake complex component A periplasmic At12D13_RS21575 PF01336 OB-fold nucleic acid binding domain At12D13_RS21575 PF00152 tRNA synthetases class II (D, K and N) At12D13_RS21585 PF00749 tRNA synthetases class I (E and Q), catalytic domain At12D13_RS21590 PF02080 TrkA-C domain At12D13_RS21590 PF03600 Citrate transporter At12D13_RS21595 PF03471 Transporter associated domain At12D13_RS21595 PF03741 Integral membrane protein TerC family At12D13_RS21605 PF13533 Biotin-lipoyl like At12D13_RS21610 PF07690 Major Facilitator Superfamily At12D13_RS21620 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS21620 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family At12D13_RS21625 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At12D13_RS21625 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At12D13_RS21635 PF01261 Xylose isomerase-like TIM barrel At12D13_RS21645 PF00232 Glycosyl hydrolase family 1 At12D13_RS21650 PF00881 Nitroreductase family At12D13_RS21655 PF00005 ABC transporter At12D13_RS21655 PF09383 NIL domain At12D13_RS21660 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS21665 PF03180 NLPA lipoprotein At12D13_RS21670 PF13188 PAS domain At12D13_RS21670 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS21670 PF03707 Bacterial signalling protein N terminal repeat At12D13_RS21670 PF00563 EAL domain At12D13_RS21675 PF17773 UPF0176 acylphosphatase like domain At12D13_RS21675 PF00581 Rhodanese-like domain At12D13_RS21685 PF01928 CYTH domain At12D13_RS21690 PF01081 KDPG and KHG aldolase At12D13_RS21715 PF03824 High-affinity nickel-transport protein At12D13_RS21735 PF13505 Outer membrane protein beta-barrel domain At12D13_RS21750 PF07683 Cobalamin synthesis protein cobW C-terminal domain At12D13_RS21750 PF02492 CobW/HypB/UreG, nucleotide-binding domain At12D13_RS21755 PF02633 Creatinine amidohydrolase At12D13_RS21760 PF01047 MarR family At12D13_RS21765 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS21770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_RS21770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_RS21775 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS21775 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS21785 PF04962 KduI/IolB family At12D13_RS21790 PF01261 Xylose isomerase-like TIM barrel At12D13_RS21795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At12D13_RS21795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At12D13_RS21795 PF00205 Thiamine pyrophosphate enzyme, central domain At12D13_RS21800 PF00294 pfkB family carbohydrate kinase At12D13_RS21810 PF00005 ABC transporter At12D13_RS21815 PF12399 Branched-chain amino acid ATP-binding cassette transporter At12D13_RS21815 PF00005 ABC transporter At12D13_RS21830 PF13458 Periplasmic binding protein At12D13_RS21840 PF12833 Helix-turn-helix domain At12D13_RS21850 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS21850 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS21855 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS21860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS21865 PF00005 ABC transporter At12D13_RS21865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS21885 PF01261 Xylose isomerase-like TIM barrel At12D13_RS21885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At12D13_RS21895 PF01220 Dehydroquinase class II At12D13_RS21900 PF08501 Shikimate dehydrogenase substrate binding domain At12D13_RS21900 PF18317 Shikimate 5'-dehydrogenase C-terminal domain At12D13_RS21905 PF00005 ABC transporter At12D13_RS21910 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_RS21915 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_RS21920 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS21925 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS21930 PF10397 Adenylosuccinate lyase C-terminus At12D13_RS21930 PF00206 Lyase At12D13_RS21935 PF00775 Dioxygenase At12D13_RS21940 PF00775 Dioxygenase At12D13_RS21940 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal At12D13_RS21945 PF02627 Carboxymuconolactone decarboxylase family At12D13_RS21950 PF00561 alpha/beta hydrolase fold At12D13_RS21955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS21955 PF03466 LysR substrate binding domain At12D13_RS21960 PF01494 FAD binding domain At12D13_RS21970 PF09339 IclR helix-turn-helix domain At12D13_RS21970 PF01614 Bacterial transcriptional regulator At12D13_RS21975 PF01144 Coenzyme A transferase At12D13_RS21980 PF01144 Coenzyme A transferase At12D13_RS21985 PF02803 Thiolase, C-terminal domain At12D13_RS21985 PF00108 Thiolase, N-terminal domain At12D13_RS21990 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS21995 PF13407 Periplasmic binding protein domain At12D13_RS22000 PF13407 Periplasmic binding protein domain At12D13_RS22005 PF01261 Xylose isomerase-like TIM barrel At12D13_RS22010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS22010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS22020 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS22025 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22030 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22035 PF00005 ABC transporter At12D13_RS22035 PF17912 MalK OB fold domain At12D13_RS22045 PF07470 Glycosyl Hydrolase Family 88 At12D13_RS22065 PF01325 Iron dependent repressor, N-terminal DNA binding domain At12D13_RS22065 PF00480 ROK family At12D13_RS22075 PF17912 MalK OB fold domain At12D13_RS22075 PF00005 ABC transporter At12D13_RS22080 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22085 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22090 PF03009 Glycerophosphoryl diester phosphodiesterase family At12D13_RS22095 PF00459 Inositol monophosphatase family At12D13_RS22100 PF00106 short chain dehydrogenase At12D13_RS22105 PF12852 Cupin At12D13_RS22105 PF12833 Helix-turn-helix domain At12D13_RS22110 PF00480 ROK family At12D13_RS22120 PF00005 ABC transporter At12D13_RS22120 PF08402 TOBE domain At12D13_RS22125 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22140 PF11953 Domain of unknown function (DUF3470) At12D13_RS22140 PF00037 4Fe-4S binding domain At12D13_RS22145 PF02777 Iron/manganese superoxide dismutases, C-terminal domain At12D13_RS22145 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain At12D13_RS22175 PF13784 Fic/DOC family N-terminal At12D13_RS22175 PF02661 Fic/DOC family At12D13_RS22185 PF17841 BID domain of Bartonella effector protein (Bep) At12D13_RS22185 PF03389 MobA/MobL family At12D13_RS22185 PF01443 Viral (Superfamily 1) RNA helicase At12D13_RS22205 PF01758 Sodium Bile acid symporter family At12D13_RS22210 PF00248 Aldo/keto reductase family At12D13_RS22215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS22215 PF03466 LysR substrate binding domain At12D13_RS22225 PF01557 Fumarylacetoacetate (FAA) hydrolase family At12D13_RS22245 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22250 PF00005 ABC transporter At12D13_RS22255 PF01614 Bacterial transcriptional regulator At12D13_RS22255 PF09339 IclR helix-turn-helix domain At12D13_RS22260 PF00005 ABC transporter At12D13_RS22260 PF00664 ABC transporter transmembrane region At12D13_RS22295 PF00535 Glycosyl transferase family 2 At12D13_RS22320 PF05045 Rhamnan synthesis protein F At12D13_RS22330 PF00483 Nucleotidyl transferase At12D13_RS22335 PF04321 RmlD substrate binding domain At12D13_RS22340 PF16363 GDP-mannose 4,6 dehydratase At12D13_RS22345 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase At12D13_RS22350 PF13361 UvrD-like helicase C-terminal domain At12D13_RS22350 PF00580 UvrD/REP helicase N-terminal domain At12D13_RS22355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS22355 PF00005 ABC transporter At12D13_RS22360 PF00005 ABC transporter At12D13_RS22360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS22365 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS22365 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22370 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22375 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS22375 PF07729 FCD domain At12D13_RS22380 PF03786 D-mannonate dehydratase (UxuA) At12D13_RS22385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS22395 PF13188 PAS domain At12D13_RS22395 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS22395 PF03707 Bacterial signalling protein N terminal repeat At12D13_RS22395 PF00563 EAL domain At12D13_RS22410 PF02735 Ku70/Ku80 beta-barrel domain At12D13_RS22415 PF04679 ATP dependent DNA ligase C terminal region At12D13_RS22415 PF01068 ATP dependent DNA ligase domain At12D13_RS22415 PF13298 DNA polymerase Ligase (LigD) At12D13_RS22420 PF02735 Ku70/Ku80 beta-barrel domain At12D13_RS22425 PF01384 Phosphate transporter family At12D13_RS22430 PF01865 Protein of unknown function DUF47 At12D13_RS22440 PF00873 AcrB/AcrD/AcrF family At12D13_RS22445 PF13533 Biotin-lipoyl like At12D13_RS22450 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS22450 PF00072 Response regulator receiver domain At12D13_RS22455 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS22455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS22455 PF00672 HAMP domain At12D13_RS22465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS22465 PF03466 LysR substrate binding domain At12D13_RS22470 PF00141 Peroxidase At12D13_RS22480 PF12833 Helix-turn-helix domain At12D13_RS22480 PF02311 AraC-like ligand binding domain At12D13_RS22485 PF00171 Aldehyde dehydrogenase family At12D13_RS22490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS22490 PF03466 LysR substrate binding domain At12D13_RS22495 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At12D13_RS22500 PF00884 Sulfatase At12D13_RS22500 PF12411 Choline sulfatase enzyme C terminal At12D13_RS22505 PF00294 pfkB family carbohydrate kinase At12D13_RS22510 PF00005 ABC transporter At12D13_RS22510 PF08402 TOBE domain At12D13_RS22515 PF00206 Lyase At12D13_RS22515 PF14698 Argininosuccinate lyase C-terminal At12D13_RS22520 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22525 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22530 PF13416 Bacterial extracellular solute-binding protein At12D13_RS22535 PF00480 ROK family At12D13_RS22560 PF02056 Family 4 glycosyl hydrolase At12D13_RS22560 PF11975 Family 4 glycosyl hydrolase C-terminal domain At12D13_RS22565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS22570 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22575 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS22575 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22580 PF00005 ABC transporter At12D13_RS22580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS22585 PF02056 Family 4 glycosyl hydrolase At12D13_RS22585 PF11975 Family 4 glycosyl hydrolase C-terminal domain At12D13_RS22590 PF13533 Biotin-lipoyl like At12D13_RS22595 PF00005 ABC transporter At12D13_RS22615 PF00072 Response regulator receiver domain At12D13_RS22620 PF00091 Tubulin/FtsZ family, GTPase domain At12D13_RS22620 PF12327 FtsZ family, C-terminal domain At12D13_RS22625 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS22625 PF07729 FCD domain At12D13_RS22630 PF00701 Dihydrodipicolinate synthetase family At12D13_RS22635 PF02615 Malate/L-lactate dehydrogenase At12D13_RS22650 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22655 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22660 PF00005 ABC transporter At12D13_RS22665 PF01266 FAD dependent oxidoreductase At12D13_RS22675 PF05544 Proline racemase At12D13_RS22680 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS22690 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_RS22695 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22700 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22705 PF00005 ABC transporter At12D13_RS22710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_RS22710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_RS22715 PF03707 Bacterial signalling protein N terminal repeat At12D13_RS22715 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS22715 PF00563 EAL domain At12D13_RS22720 PF02530 Porin subfamily At12D13_RS22725 PF01979 Amidohydrolase family At12D13_RS22730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS22735 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22740 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS22740 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22745 PF01979 Amidohydrolase family At12D13_RS22750 PF01979 Amidohydrolase family At12D13_RS22755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS22755 PF00005 ABC transporter At12D13_RS22760 PF00005 ABC transporter At12D13_RS22760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS22765 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS22765 PF07729 FCD domain At12D13_RS22770 PF01613 Flavin reductase like domain At12D13_RS22775 PF01177 Asp/Glu/Hydantoin racemase At12D13_RS22780 PF03466 LysR substrate binding domain At12D13_RS22780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS22790 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region At12D13_RS22790 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit At12D13_RS22790 PF00037 4Fe-4S binding domain At12D13_RS22795 PF01568 Molydopterin dinucleotide binding domain At12D13_RS22795 PF00037 4Fe-4S binding domain At12D13_RS22795 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region At12D13_RS22795 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At12D13_RS22795 PF00384 Molybdopterin oxidoreductase At12D13_RS22805 PF07690 Major Facilitator Superfamily At12D13_RS22810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS22815 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS22815 PF00072 Response regulator receiver domain At12D13_RS22835 PF05532 CsbD-like At12D13_RS22845 PF07729 FCD domain At12D13_RS22845 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS22850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS22855 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22860 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS22860 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS22870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS22870 PF00005 ABC transporter At12D13_RS22885 PF02777 Iron/manganese superoxide dismutases, C-terminal domain At12D13_RS22885 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain At12D13_RS22890 PF03401 Tripartite tricarboxylate transporter family receptor At12D13_RS22895 PF00664 ABC transporter transmembrane region At12D13_RS22895 PF00005 ABC transporter At12D13_RS22900 PF00005 ABC transporter At12D13_RS22910 PF13953 PapC C-terminal domain At12D13_RS22910 PF00577 Outer membrane usher protein At12D13_RS22910 PF13954 PapC N-terminal domain At12D13_RS22925 PF06434 Aconitate hydratase 2 N-terminus At12D13_RS22925 PF00330 Aconitase family (aconitate hydratase) At12D13_RS22925 PF11791 Aconitate B N-terminal domain At12D13_RS22930 PF00672 HAMP domain At12D13_RS22930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS22940 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_RS22950 PF00107 Zinc-binding dehydrogenase At12D13_RS22950 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS22955 PF01590 GAF domain At12D13_RS22955 PF02954 Bacterial regulatory protein, Fis family At12D13_RS22955 PF00158 Sigma-54 interaction domain At12D13_RS22965 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS22975 PF00005 ABC transporter At12D13_RS22980 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS22985 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS22990 PF01261 Xylose isomerase-like TIM barrel At12D13_RS23000 PF01261 Xylose isomerase-like TIM barrel At12D13_RS23010 PF00005 ABC transporter At12D13_RS23015 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS23020 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS23025 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_RS23030 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family At12D13_RS23035 PF00557 Metallopeptidase family M24 At12D13_RS23035 PF01321 Creatinase/Prolidase N-terminal domain At12D13_RS23040 PF02423 Ornithine cyclodeaminase/mu-crystallin family At12D13_RS23045 PF00291 Pyridoxal-phosphate dependent enzyme At12D13_RS23050 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS23050 PF00155 Aminotransferase class I and II At12D13_RS23055 PF00202 Aminotransferase class-III At12D13_RS23060 PF00171 Aldehyde dehydrogenase family At12D13_RS23065 PF01037 Lrp/AsnC ligand binding domain At12D13_RS23070 PF13302 Acetyltransferase (GNAT) domain At12D13_RS23090 PF04199 Putative cyclase At12D13_RS23095 PF01494 FAD binding domain At12D13_RS23100 PF00190 Cupin At12D13_RS23110 PF00072 Response regulator receiver domain At12D13_RS23110 PF00196 Bacterial regulatory proteins, luxR family At12D13_RS23115 PF00196 Bacterial regulatory proteins, luxR family At12D13_RS23115 PF00072 Response regulator receiver domain At12D13_RS23120 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS23120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS23120 PF00072 Response regulator receiver domain At12D13_RS23120 PF08448 PAS fold At12D13_RS23120 PF13426 PAS domain At12D13_RS23125 PF00384 Molybdopterin oxidoreductase At12D13_RS23130 PF00210 Ferritin-like domain At12D13_RS23135 PF00561 alpha/beta hydrolase fold At12D13_RS23145 PF06441 Epoxide hydrolase N terminus At12D13_RS23150 PF00171 Aldehyde dehydrogenase family At12D13_RS23155 PF02566 OsmC-like protein At12D13_RS23160 PF00672 HAMP domain At12D13_RS23160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS23160 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS23165 PF00072 Response regulator receiver domain At12D13_RS23165 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS23170 PF00561 alpha/beta hydrolase fold At12D13_RS23180 PF00578 AhpC/TSA family At12D13_RS23180 PF02683 Cytochrome C biogenesis protein transmembrane region At12D13_RS23180 PF17991 Thioredoxin like C-terminal domain At12D13_RS23205 PF13426 PAS domain At12D13_RS23205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS23205 PF00072 Response regulator receiver domain At12D13_RS23210 PF00072 Response regulator receiver domain At12D13_RS23210 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS23225 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS23230 PF00005 ABC transporter At12D13_RS23230 PF08402 TOBE domain At12D13_RS23235 PF00459 Inositol monophosphatase family At12D13_RS23245 PF16363 GDP-mannose 4,6 dehydratase At12D13_RS23250 PF01370 NAD dependent epimerase/dehydratase family At12D13_RS23255 PF12708 Pectate lyase superfamily protein At12D13_RS23255 PF13229 Right handed beta helix region At12D13_RS23255 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) At12D13_RS23275 PF00072 Response regulator receiver domain At12D13_RS23275 PF00196 Bacterial regulatory proteins, luxR family At12D13_RS23280 PF02585 GlcNAc-PI de-N-acetylase At12D13_RS23285 PF00483 Nucleotidyl transferase At12D13_RS23290 PF08484 C-methyltransferase C-terminal domain At12D13_RS23290 PF08421 Putative zinc binding domain At12D13_RS23295 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase At12D13_RS23300 PF09940 Domain of unknown function (DUF2172) At12D13_RS23300 PF16254 Domain of unknown function (DUF4910) At12D13_RS23300 PF16221 winged helix-turn-helix At12D13_RS23305 PF16363 GDP-mannose 4,6 dehydratase At12D13_RS23315 PF00072 Response regulator receiver domain At12D13_RS23315 PF00196 Bacterial regulatory proteins, luxR family At12D13_RS23320 PF00196 Bacterial regulatory proteins, luxR family At12D13_RS23320 PF00072 Response regulator receiver domain At12D13_RS23340 PF13439 Glycosyltransferase Family 4 At12D13_RS23340 PF00534 Glycosyl transferases group 1 At12D13_RS23350 PF00953 Glycosyl transferase family 4 At12D13_RS23370 PF00534 Glycosyl transferases group 1 At12D13_RS23370 PF13439 Glycosyltransferase Family 4 At12D13_RS23375 PF13439 Glycosyltransferase Family 4 At12D13_RS23375 PF00534 Glycosyl transferases group 1 At12D13_RS23385 PF01037 Lrp/AsnC ligand binding domain At12D13_RS23410 PF00501 AMP-binding enzyme At12D13_RS23410 PF13193 AMP-binding enzyme C-terminal domain At12D13_RS23415 PF02803 Thiolase, C-terminal domain At12D13_RS23415 PF00108 Thiolase, N-terminal domain At12D13_RS23420 PF01614 Bacterial transcriptional regulator At12D13_RS23420 PF09339 IclR helix-turn-helix domain At12D13_RS23430 PF03480 Bacterial extracellular solute-binding protein, family 7 At12D13_RS23430 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At12D13_RS23435 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At12D13_RS23465 PF00723 Glycosyl hydrolases family 15 At12D13_RS23465 PF09137 Glucodextranase, domain N At12D13_RS23470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At12D13_RS23470 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain At12D13_RS23475 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain At12D13_RS23475 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain At12D13_RS23530 PF07506 RepB plasmid partitioning protein At12D13_RS23530 PF02195 ParB-like nuclease domain At12D13_RS23535 PF11800 Replication protein C C-terminal region At12D13_RS23535 PF03428 Replication protein C N-terminal domain At12D13_RS23545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS23545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS23550 PF00005 ABC transporter At12D13_RS23555 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_RS23560 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS23585 PF02525 Flavodoxin-like fold At12D13_RS23615 PF07756 Protein of unknown function (DUF1612) At12D13_RS23615 PF11972 HTH DNA binding domain At12D13_RS23625 PF13676 TIR domain At12D13_RS23635 PF02511 Thymidylate synthase complementing protein At12D13_RS23685 PF00248 Aldo/keto reductase family At12D13_RS23695 PF07690 Major Facilitator Superfamily At12D13_RS23700 PF01361 Tautomerase enzyme At12D13_RS23710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS23710 PF03466 LysR substrate binding domain At12D13_RS23715 PF01799 [2Fe-2S] binding domain At12D13_RS23715 PF00111 2Fe-2S iron-sulfur cluster binding domain At12D13_RS23720 PF03450 CO dehydrogenase flavoprotein C-terminal domain At12D13_RS23720 PF00941 FAD binding domain in molybdopterin dehydrogenase At12D13_RS23725 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase At12D13_RS23725 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain At12D13_RS23730 PF02625 XdhC and CoxI family At12D13_RS23730 PF13478 XdhC Rossmann domain At12D13_RS23755 PF02129 X-Pro dipeptidyl-peptidase (S15 family) At12D13_RS23760 PF07690 Major Facilitator Superfamily At12D13_RS23765 PF03466 LysR substrate binding domain At12D13_RS23765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS23795 PF01810 LysE type translocator At12D13_RS23810 PF00196 Bacterial regulatory proteins, luxR family At12D13_RS23810 PF00072 Response regulator receiver domain At12D13_RS23815 PF00672 HAMP domain At12D13_RS23815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS23815 PF07730 Histidine kinase At12D13_RS23830 PF01638 HxlR-like helix-turn-helix At12D13_RS23855 PF00873 AcrB/AcrD/AcrF family At12D13_RS23865 PF00440 Bacterial regulatory proteins, tetR family At12D13_RS23875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS23875 PF03466 LysR substrate binding domain At12D13_RS23880 PF12146 Serine aminopeptidase, S33 At12D13_RS23885 PF12146 Serine aminopeptidase, S33 At12D13_RS23895 PF00561 alpha/beta hydrolase fold At12D13_RS23920 PF04193 PQ loop repeat At12D13_RS23925 PF00664 ABC transporter transmembrane region At12D13_RS23925 PF00005 ABC transporter At12D13_RS23955 PF00072 Response regulator receiver domain At12D13_RS23980 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At12D13_RS23980 PF00128 Alpha amylase, catalytic domain At12D13_RS23990 PF04193 PQ loop repeat At12D13_RS24015 PF01566 Natural resistance-associated macrophage protein At12D13_RS24015 PF03358 NADPH-dependent FMN reductase At12D13_RS24030 PF18011 C-terminal domain found in long catalases At12D13_RS24030 PF06628 Catalase-related immune-responsive At12D13_RS24030 PF00199 Catalase At12D13_RS24035 PF05974 Domain of unknown function (DUF892) At12D13_RS24060 PF04542 Sigma-70 region 2 At12D13_RS24060 PF08281 Sigma-70, region 4 At12D13_RS24065 PF11941 Domain of unknown function (DUF3459) At12D13_RS24065 PF00128 Alpha amylase, catalytic domain At12D13_RS24065 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At12D13_RS24070 PF08323 Starch synthase catalytic domain At12D13_RS24070 PF00534 Glycosyl transferases group 1 At12D13_RS24160 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS24170 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS24175 PF00005 ABC transporter At12D13_RS24185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS24185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS24195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS24195 PF00005 ABC transporter At12D13_RS24200 PF00005 ABC transporter At12D13_RS24200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS24205 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS24205 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS24210 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS24215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS24220 PF07729 FCD domain At12D13_RS24220 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS24225 PF00701 Dihydrodipicolinate synthetase family At12D13_RS24230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_RS24230 PF13378 Enolase C-terminal domain-like At12D13_RS24235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS24235 PF03466 LysR substrate binding domain At12D13_RS24240 PF02798 Glutathione S-transferase, N-terminal domain At12D13_RS24240 PF00043 Glutathione S-transferase, C-terminal domain At12D13_RS24285 PF02735 Ku70/Ku80 beta-barrel domain At12D13_RS24290 PF02735 Ku70/Ku80 beta-barrel domain At12D13_RS24295 PF13298 DNA polymerase Ligase (LigD) At12D13_RS24295 PF04679 ATP dependent DNA ligase C terminal region At12D13_RS24295 PF01068 ATP dependent DNA ligase domain At12D13_RS24315 PF13298 DNA polymerase Ligase (LigD) At12D13_RS24315 PF01068 ATP dependent DNA ligase domain At12D13_RS24315 PF04679 ATP dependent DNA ligase C terminal region At12D13_RS24330 PF13416 Bacterial extracellular solute-binding protein At12D13_RS24335 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS24340 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS24350 PF08402 TOBE domain At12D13_RS24350 PF00005 ABC transporter At12D13_RS24355 PF01380 SIS domain At12D13_RS24355 PF01418 Helix-turn-helix domain, rpiR family At12D13_RS24360 PF01047 MarR family At12D13_RS24365 PF00561 alpha/beta hydrolase fold At12D13_RS24375 PF00701 Dihydrodipicolinate synthetase family At12D13_RS24380 PF00005 ABC transporter At12D13_RS24380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At12D13_RS24385 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS24385 PF12911 N-terminal TM domain of oligopeptide transport permease C At12D13_RS24390 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS24395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At12D13_RS24410 PF04166 Pyridoxal phosphate biosynthetic protein PdxA At12D13_RS24415 PF00465 Iron-containing alcohol dehydrogenase At12D13_RS24420 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS24420 PF07729 FCD domain At12D13_RS24425 PF07005 Sugar-binding N-terminal domain At12D13_RS24425 PF17042 Nucleotide-binding C-terminal domain At12D13_RS24440 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS24445 PF01547 Bacterial extracellular solute-binding protein At12D13_RS24450 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS24455 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS24470 PF17912 MalK OB fold domain At12D13_RS24470 PF00005 ABC transporter At12D13_RS24475 PF03466 LysR substrate binding domain At12D13_RS24475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS24490 PF06745 KaiC At12D13_RS24495 PF13426 PAS domain At12D13_RS24495 PF13581 Histidine kinase-like ATPase domain At12D13_RS24495 PF07536 HWE histidine kinase At12D13_RS24500 PF03466 LysR substrate binding domain At12D13_RS24500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS24505 PF00561 alpha/beta hydrolase fold At12D13_RS24515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At12D13_RS24520 PF00873 AcrB/AcrD/AcrF family At12D13_RS24530 PF00326 Prolyl oligopeptidase family At12D13_RS24530 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain At12D13_RS24540 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain At12D13_RS24540 PF00326 Prolyl oligopeptidase family At12D13_RS24550 PF00512 His Kinase A (phospho-acceptor) domain At12D13_RS24550 PF08521 Two-component sensor kinase N-terminal At12D13_RS24550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS24555 PF00072 Response regulator receiver domain At12D13_RS24555 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS24560 PF00202 Aminotransferase class-III At12D13_RS24565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS24565 PF03466 LysR substrate binding domain At12D13_RS24580 PF00285 Citrate synthase, C-terminal domain At12D13_RS24585 PF00285 Citrate synthase, C-terminal domain At12D13_RS24600 PF00593 TonB dependent receptor At12D13_RS24600 PF07715 TonB-dependent Receptor Plug Domain At12D13_RS24605 PF01497 Periplasmic binding protein At12D13_RS24615 PF01032 FecCD transport family At12D13_RS24620 PF01032 FecCD transport family At12D13_RS24625 PF00005 ABC transporter At12D13_RS24650 PF03358 NADPH-dependent FMN reductase At12D13_RS24660 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS24660 PF00107 Zinc-binding dehydrogenase At12D13_RS24665 PF03466 LysR substrate binding domain At12D13_RS24665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS24675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS24675 PF03466 LysR substrate binding domain At12D13_RS24680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_RS24680 PF01842 ACT domain At12D13_RS24680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_RS24685 PF03737 Aldolase/RraA At12D13_RS24700 PF01970 Tripartite tricarboxylate transporter TctA family At12D13_RS24705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At12D13_RS24705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_RS24710 PF13660 Domain of unknown function (DUF4147) At12D13_RS24710 PF05161 MOFRL family At12D13_RS24745 PF13426 PAS domain At12D13_RS24745 PF00072 Response regulator receiver domain At12D13_RS24745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS24755 PF12728 Helix-turn-helix domain At12D13_RS24755 PF02661 Fic/DOC family At12D13_RS24790 PF15975 Flotillin At12D13_RS24790 PF01145 SPFH domain / Band 7 family At12D13_RS24815 PF03466 LysR substrate binding domain At12D13_RS24815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS24845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS24845 PF03466 LysR substrate binding domain At12D13_RS24855 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS24860 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS24865 PF08402 TOBE domain At12D13_RS24865 PF00005 ABC transporter At12D13_RS24870 PF13454 FAD-NAD(P)-binding At12D13_RS24875 PF01323 DSBA-like thioredoxin domain At12D13_RS24890 PF01554 MatE At12D13_RS24915 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family At12D13_RS24915 PF00356 Bacterial regulatory proteins, lacI family At12D13_RS24920 PF01261 Xylose isomerase-like TIM barrel At12D13_RS24925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At12D13_RS24925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At12D13_RS24935 PF01261 Xylose isomerase-like TIM barrel At12D13_RS24940 PF01638 HxlR-like helix-turn-helix At12D13_RS24970 PF00672 HAMP domain At12D13_RS24970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At12D13_RS24980 PF00106 short chain dehydrogenase At12D13_RS24985 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At12D13_RS24990 PF00561 alpha/beta hydrolase fold At12D13_RS24995 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS24995 PF00107 Zinc-binding dehydrogenase At12D13_RS25000 PF05406 WGR domain At12D13_RS25005 PF00011 Hsp20/alpha crystallin family At12D13_RS25020 PF00005 ABC transporter At12D13_RS25025 PF12704 MacB-like periplasmic core domain At12D13_RS25025 PF02687 FtsX-like permease family At12D13_RS25040 PF05035 2-keto-3-deoxy-galactonokinase At12D13_RS25045 PF00701 Dihydrodipicolinate synthetase family At12D13_RS25050 PF13378 Enolase C-terminal domain-like At12D13_RS25050 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_RS25060 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS25065 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS25070 PF17912 MalK OB fold domain At12D13_RS25070 PF00005 ABC transporter At12D13_RS25075 PF16363 GDP-mannose 4,6 dehydratase At12D13_RS25080 PF09339 IclR helix-turn-helix domain At12D13_RS25080 PF01614 Bacterial transcriptional regulator At12D13_RS25090 PF02705 K+ potassium transporter At12D13_RS25105 PF00817 impB/mucB/samB family At12D13_RS25105 PF11799 impB/mucB/samB family C-terminal domain At12D13_RS25125 PF01063 Amino-transferase class IV At12D13_RS25130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At12D13_RS25140 PF06418 CTP synthase N-terminus At12D13_RS25140 PF00117 Glutamine amidotransferase class-I At12D13_RS25145 PF01321 Creatinase/Prolidase N-terminal domain At12D13_RS25145 PF00557 Metallopeptidase family M24 At12D13_RS25150 PF13378 Enolase C-terminal domain-like At12D13_RS25150 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At12D13_RS25155 PF07687 Peptidase dimerisation domain At12D13_RS25155 PF01546 Peptidase family M20/M25/M40 At12D13_RS25160 PF00005 ABC transporter At12D13_RS25165 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS25170 PF00497 Bacterial extracellular solute-binding proteins, family 3 At12D13_RS25175 PF00392 Bacterial regulatory proteins, gntR family At12D13_RS25175 PF07729 FCD domain At12D13_RS25210 PF04542 Sigma-70 region 2 At12D13_RS25210 PF08281 Sigma-70, region 4 At12D13_RS25220 PF00199 Catalase At12D13_RS25220 PF18011 C-terminal domain found in long catalases At12D13_RS25220 PF06628 Catalase-related immune-responsive At12D13_RS25235 PF05974 Domain of unknown function (DUF892) At12D13_RS25240 PF00561 alpha/beta hydrolase fold At12D13_RS25245 PF00440 Bacterial regulatory proteins, tetR family At12D13_RS25245 PF17925 Tetracyclin repressor-like, C-terminal domain At12D13_RS25250 PF02625 XdhC and CoxI family At12D13_RS25250 PF13478 XdhC Rossmann domain At12D13_RS25255 PF01799 [2Fe-2S] binding domain At12D13_RS25255 PF00111 2Fe-2S iron-sulfur cluster binding domain At12D13_RS25260 PF03450 CO dehydrogenase flavoprotein C-terminal domain At12D13_RS25260 PF00941 FAD binding domain in molybdopterin dehydrogenase At12D13_RS25265 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain At12D13_RS25265 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase At12D13_RS25270 PF12804 MobA-like NTP transferase domain At12D13_RS25270 PF00132 Bacterial transferase hexapeptide (six repeats) At12D13_RS25290 PF00486 Transcriptional regulatory protein, C terminal At12D13_RS25290 PF00072 Response regulator receiver domain At12D13_RS25295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS25310 PF13426 PAS domain At12D13_RS25310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS25310 PF00072 Response regulator receiver domain At12D13_RS25315 PF06745 KaiC At12D13_RS25330 PF00313 'Cold-shock' DNA-binding domain At12D13_RS25335 PF00226 DnaJ domain At12D13_RS25365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At12D13_RS25365 PF08028 Acyl-CoA dehydrogenase, C-terminal domain At12D13_RS25370 PF00005 ABC transporter At12D13_RS25380 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS25390 PF00005 ABC transporter At12D13_RS25390 PF12399 Branched-chain amino acid ATP-binding cassette transporter At12D13_RS25395 PF00296 Luciferase-like monooxygenase At12D13_RS25400 PF03358 NADPH-dependent FMN reductase At12D13_RS25405 PF13581 Histidine kinase-like ATPase domain At12D13_RS25405 PF07536 HWE histidine kinase At12D13_RS25405 PF13426 PAS domain At12D13_RS25420 PF13458 Periplasmic binding protein At12D13_RS25425 PF02653 Branched-chain amino acid transport system / permease component At12D13_RS25435 PF00005 ABC transporter At12D13_RS25435 PF12399 Branched-chain amino acid ATP-binding cassette transporter At12D13_RS25440 PF00005 ABC transporter At12D13_RS25440 PF09383 NIL domain At12D13_RS25445 PF00795 Carbon-nitrogen hydrolase At12D13_RS25460 PF07992 Pyridine nucleotide-disulphide oxidoreductase At12D13_RS25460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At12D13_RS25470 PF13533 Biotin-lipoyl like At12D13_RS25490 PF02311 AraC-like ligand binding domain At12D13_RS25490 PF12833 Helix-turn-helix domain At12D13_RS25510 PF03466 LysR substrate binding domain At12D13_RS25510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS25515 PF00753 Metallo-beta-lactamase superfamily At12D13_RS25530 PF13614 AAA domain At12D13_RS25535 PF07506 RepB plasmid partitioning protein At12D13_RS25535 PF02195 ParB-like nuclease domain At12D13_RS25540 PF03428 Replication protein C N-terminal domain At12D13_RS25540 PF11800 Replication protein C C-terminal region At12D13_RS25555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS25555 PF13426 PAS domain At12D13_RS25555 PF00072 Response regulator receiver domain At12D13_RS25565 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS25570 PF00528 Binding-protein-dependent transport system inner membrane component At12D13_RS25590 PF01566 Natural resistance-associated macrophage protein At12D13_RS25590 PF03358 NADPH-dependent FMN reductase At12D13_RS25605 PF06150 ChaB At12D13_RS25615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At12D13_RS25615 PF00205 Thiamine pyrophosphate enzyme, central domain At12D13_RS25615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At12D13_RS25635 PF01339 CheB methylesterase At12D13_RS25635 PF01739 CheR methyltransferase, SAM binding domain At12D13_RS25635 PF03705 CheR methyltransferase, all-alpha domain At12D13_RS25635 PF08448 PAS fold At12D13_RS25670 PF00115 Cytochrome C and Quinol oxidase polypeptide I At12D13_RS25675 PF00034 Cytochrome c At12D13_RS25675 PF02790 Cytochrome C oxidase subunit II, transmembrane domain At12D13_RS25675 PF00116 Cytochrome C oxidase subunit II, periplasmic domain At12D13_RS25680 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS25680 PF13823 Alcohol dehydrogenase GroES-associated At12D13_RS25680 PF00107 Zinc-binding dehydrogenase At12D13_RS25685 PF00384 Molybdopterin oxidoreductase At12D13_RS25695 PF00034 Cytochrome c At12D13_RS25695 PF02790 Cytochrome C oxidase subunit II, transmembrane domain At12D13_RS25695 PF00116 Cytochrome C oxidase subunit II, periplasmic domain At12D13_RS25700 PF00115 Cytochrome C and Quinol oxidase polypeptide I At12D13_RS25750 PF08241 Methyltransferase domain At12D13_RS25755 PF08281 Sigma-70, region 4 At12D13_RS25755 PF04542 Sigma-70 region 2 At12D13_RS25760 PF00128 Alpha amylase, catalytic domain At12D13_RS25760 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At12D13_RS25760 PF11941 Domain of unknown function (DUF3459) At12D13_RS25770 PF08323 Starch synthase catalytic domain At12D13_RS25770 PF00534 Glycosyl transferases group 1 At12D13_RS25775 PF00067 Cytochrome P450 At12D13_RS25805 PF05974 Domain of unknown function (DUF892) At12D13_RS25825 PF03167 Uracil DNA glycosylase superfamily At12D13_RS25835 PF01370 NAD dependent epimerase/dehydratase family At12D13_RS25860 PF16363 GDP-mannose 4,6 dehydratase At12D13_RS25865 PF01370 NAD dependent epimerase/dehydratase family At12D13_RS25870 PF00107 Zinc-binding dehydrogenase At12D13_RS25870 PF08240 Alcohol dehydrogenase GroES-like domain At12D13_RS25960 PF02661 Fic/DOC family At12D13_RS25960 PF13784 Fic/DOC family N-terminal At12D13_RS25975 PF12951 Passenger-associated-transport-repeat At12D13_RS25980 PF13505 Outer membrane protein beta-barrel domain At12D13_RS25990 PF13426 PAS domain At12D13_RS25990 PF08447 PAS fold At12D13_RS25990 PF07536 HWE histidine kinase At12D13_RS25995 PF06745 KaiC At12D13_RS26000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At12D13_RS26000 PF07730 Histidine kinase At12D13_RS26005 PF00072 Response regulator receiver domain At12D13_RS26030 PF03466 LysR substrate binding domain At12D13_RS26030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS26040 PF00011 Hsp20/alpha crystallin family At12D13_RS26045 PF00011 Hsp20/alpha crystallin family At12D13_RS26055 PF01192 RNA polymerase Rpb6 At12D13_RS26125 PF11972 HTH DNA binding domain At12D13_RS26125 PF07756 Protein of unknown function (DUF1612) At12D13_RS26145 PF01850 PIN domain At12D13_RS26155 PF00990 Diguanylate cyclase, GGDEF domain At12D13_RS26155 PF07694 5TMR of 5TMR-LYT At12D13_RS26160 PF12146 Serine aminopeptidase, S33 At12D13_RS26200 PF02796 Helix-turn-helix domain of resolvase At12D13_RS26200 PF00239 Resolvase, N terminal domain At12D13_RS26420 PF11799 impB/mucB/samB family C-terminal domain At12D13_RS26420 PF11798 IMS family HHH motif At12D13_RS26420 PF13438 Domain of unknown function (DUF4113) At12D13_RS26420 PF00817 impB/mucB/samB family At12D13_RS26425 PF00717 Peptidase S24-like At12D13_RS26535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At12D13_RS26535 PF03466 LysR substrate binding domain At12D13_RS26540 PF06441 Epoxide hydrolase N terminus