locus-tag class description Atu0001 PF03618 Kinase/pyrophosphorylase Atu0002 PF02545 Maf-like protein Atu0003 PF08501 Shikimate dehydrogenase substrate binding domain Atu0003 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Atu0003 PF01488 Shikimate / quinate 5-dehydrogenase Atu0004 PF01121 Dephospho-CoA kinase Atu0005 PF00929 Exonuclease Atu0006 PF02556 Preprotein translocase subunit SecB Atu0007 PF04186 FxsA cytoplasmic membrane protein Atu0009 PF03562 MltA specific insert domain Atu0009 PF06725 3D domain Atu0012 PF00204 DNA gyrase B Atu0012 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0012 PF00986 DNA gyrase B subunit, carboxyl terminus Atu0012 PF01751 Toprim domain Atu0014 PF01557 Fumarylacetoacetate (FAA) hydrolase family Atu0017 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Atu0018 PF00291 Pyridoxal-phosphate dependent enzyme Atu0019 PF00290 Tryptophan synthase alpha chain Atu0020 PF01039 Carboxyl transferase domain Atu0021 PF08245 Mur ligase middle domain Atu0021 PF02875 Mur ligase family, glutamate ligase domain Atu0022 PF00085 Thioredoxin Atu0023 PF12705 PD-(D/E)XK nuclease superfamily Atu0023 PF00580 UvrD/REP helicase N-terminal domain Atu0023 PF13361 UvrD-like helicase C-terminal domain Atu0025 PF12804 MobA-like NTP transferase domain Atu0026 PF01636 Phosphotransferase enzyme family Atu0027 PF00512 His Kinase A (phospho-acceptor) domain Atu0027 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0029 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Atu0029 PF05221 S-adenosyl-L-homocysteine hydrolase Atu0030 PF00381 PTS HPr component phosphorylation site Atu0031 PF03610 PTS system fructose IIA component Atu0031 PF03830 PTS system sorbose subfamily IIB component Atu0032 PF02603 HPr Serine kinase N terminus Atu0032 PF07475 HPr Serine kinase C-terminal domain Atu0033 PF13755 Sensor N-terminal transmembrane domain Atu0033 PF00512 His Kinase A (phospho-acceptor) domain Atu0033 PF13756 Stimulus-sensing domain Atu0033 PF00672 HAMP domain Atu0033 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0034 PF00486 Transcriptional regulatory protein, C terminal Atu0034 PF00072 Response regulator receiver domain Atu0035 PF01293 Phosphoenolpyruvate carboxykinase Atu0036 PF00472 RF-1 domain Atu0037 PF00485 Phosphoribulokinase / Uridine kinase family Atu0038 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Atu0039 PF00977 Histidine biosynthesis protein Atu0040 PF00977 Histidine biosynthesis protein Atu0041 PF00117 Glutamine amidotransferase class-I Atu0043 PF00475 Imidazoleglycerol-phosphate dehydratase Atu0044 PF00227 Proteasome subunit Atu0045 PF10431 C-terminal, D2-small domain, of ClpB protein Atu0045 PF07724 AAA domain (Cdc48 subfamily) Atu0045 PF00004 ATPase family associated with various cellular activities (AAA) Atu0047 PF01274 Malate synthase Atu0050 PF00072 Response regulator receiver domain Atu0051 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0051 PF00512 His Kinase A (phospho-acceptor) domain Atu0052 PF08482 ATP-dependent helicase C-terminal Atu0052 PF00271 Helicase conserved C-terminal domain Atu0052 PF04408 Helicase associated domain (HA2) Atu0052 PF00270 DEAD/DEAH box helicase Atu0061 PF00270 DEAD/DEAH box helicase Atu0061 PF09382 RQC domain Atu0061 PF00570 HRDC domain Atu0061 PF00271 Helicase conserved C-terminal domain Atu0061 PF16124 RecQ zinc-binding Atu0063 PF13407 Periplasmic binding protein domain Atu0064 PF02653 Branched-chain amino acid transport system / permease component Atu0065 PF00005 ABC transporter Atu0066 PF00485 Phosphoribulokinase / Uridine kinase family Atu0068 PF00462 Glutaredoxin Atu0069 PF07972 NrdI Flavodoxin like Atu0070 PF08343 Ribonucleotide reductase N-terminal Atu0070 PF00317 Ribonucleotide reductase, all-alpha domain Atu0070 PF02867 Ribonucleotide reductase, barrel domain Atu0071 PF00268 Ribonucleotide reductase, small chain Atu0073 PF02463 RecF/RecN/SMC N terminal domain Atu0074 PF00581 Rhodanese-like domain Atu0074 PF00899 ThiF family Atu0077 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Atu0077 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu0079 PF00294 pfkB family carbohydrate kinase Atu0081 PF05175 Methyltransferase small domain Atu0081 PF08468 Methyltransferase small domain N-terminal Atu0082 PF01138 3' exoribonuclease family, domain 1 Atu0082 PF00575 S1 RNA binding domain Atu0082 PF03725 3' exoribonuclease family, domain 2 Atu0082 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Atu0082 PF00013 KH domain Atu0084 PF00312 Ribosomal protein S15 Atu0085 PF09157 Pseudouridine synthase II TruB, C-terminal Atu0085 PF16198 tRNA pseudouridylate synthase B C-terminal domain Atu0085 PF01509 TruB family pseudouridylate synthase (N terminal domain) Atu0086 PF02033 Ribosome-binding factor A Atu0087 PF08364 Bacterial translation initiation factor IF-2 associated region Atu0087 PF11987 Translation-initiation factor 2 Atu0087 PF00009 Elongation factor Tu GTP binding domain Atu0087 PF04760 Translation initiation factor IF-2, N-terminal region Atu0087 PF03144 Elongation factor Tu domain 2 Atu0089 PF08529 NusA N-terminal domain Atu0089 PF13184 NusA-like KH domain Atu0089 PF00575 S1 RNA binding domain Atu0090 PF02576 RimP N-terminal domain Atu0090 PF17384 RimP C-terminal SH3 domain Atu0091 PF05977 Transmembrane secretion effector Atu0092 PF13406 Transglycosylase SLT domain Atu0093 PF13662 Toprim domain Atu0093 PF02132 RecR protein Atu0095 PF02575 YbaB/EbfC DNA-binding family Atu0096 PF12169 DNA polymerase III subunits gamma and tau domain III Atu0096 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Atu0096 PF12170 DNA polymerase III tau subunit V interacting with alpha Atu0098 PF00293 NUDIX domain Atu0098 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain Atu0098 PF09297 NADH pyrophosphatase zinc ribbon domain Atu0099 PF00800 Prephenate dehydratase Atu0099 PF01817 Chorismate mutase type II Atu0100 PF02348 Cytidylyltransferase Atu0101 PF00034 Cytochrome c Atu0102 PF02397 Bacterial sugar transferase Atu0103 PF00912 Transglycosylase Atu0103 PF00905 Penicillin binding protein transpeptidase domain Atu0104 PF04073 Aminoacyl-tRNA editing domain Atu0106 PF00313 'Cold-shock' DNA-binding domain Atu0108 PF07687 Peptidase dimerisation domain Atu0108 PF01546 Peptidase family M20/M25/M40 Atu0109 PF01047 MarR family Atu0110 PF01367 5'-3' exonuclease, C-terminal SAM fold Atu0110 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Atu0110 PF00476 DNA polymerase family A Atu0110 PF01612 3'-5' exonuclease Atu0112 PF01783 Ribosomal L32p protein family Atu0113 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0113 PF02743 Cache domain Atu0113 PF00512 His Kinase A (phospho-acceptor) domain Atu0114 PF02954 Bacterial regulatory protein, Fis family Atu0114 PF00072 Response regulator receiver domain Atu0114 PF00158 Sigma-54 interaction domain Atu0116 PF03401 Tripartite tricarboxylate transporter family receptor Atu0117 PF07331 Tripartite tricarboxylate transporter TctB family Atu0118 PF01970 Tripartite tricarboxylate transporter TctA family Atu0119 PF04102 SlyX Atu0121 PF00226 DnaJ domain Atu0121 PF01556 DnaJ C terminal domain Atu0121 PF00684 DnaJ central domain Atu0122 PF00012 Hsp70 protein Atu0125 PF01625 Peptide methionine sulfoxide reductase Atu0126 PF02608 ABC transporter substrate-binding protein PnrA-like Atu0127 PF00005 ABC transporter Atu0128 PF02653 Branched-chain amino acid transport system / permease component Atu0129 PF02653 Branched-chain amino acid transport system / permease component Atu0130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Atu0131 PF01048 Phosphorylase superfamily Atu0132 PF01791 DeoC/LacD family aldolase Atu0133 PF02885 Glycosyl transferase family, helical bundle domain Atu0133 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Atu0133 PF00591 Glycosyl transferase family, a/b domain Atu0136 PF00962 Adenosine/AMP deaminase Atu0137 PF01676 Metalloenzyme superfamily Atu0139 PF03626 Prokaryotic Cytochrome C oxidase subunit IV Atu0140 PF00510 Cytochrome c oxidase subunit III Atu0141 PF00115 Cytochrome C and Quinol oxidase polypeptide I Atu0142 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Atu0142 PF06481 COX Aromatic Rich Motif Atu0143 PF00083 Sugar (and other) transporter Atu0143 PF07690 Major Facilitator Superfamily Atu0145 PF01645 Conserved region in glutamate synthase Atu0145 PF04898 Glutamate synthase central domain Atu0145 PF01493 GXGXG motif Atu0145 PF00310 Glutamine amidotransferases class-II Atu0146 PF00175 Oxidoreductase NAD-binding domain Atu0146 PF00667 FAD binding domain Atu0146 PF00258 Flavodoxin Atu0150 PF02801 Beta-ketoacyl synthase, C-terminal domain Atu0150 PF00109 Beta-ketoacyl synthase, N-terminal domain Atu0151 PF07977 FabA-like domain Atu0154 PF03458 UPF0126 domain Atu0156 PF06912 Protein of unknown function (DUF1275) Atu0158 PF00528 Binding-protein-dependent transport system inner membrane component Atu0159 PF00005 ABC transporter Atu0160 PF00392 Bacterial regulatory proteins, gntR family Atu0160 PF07702 UTRA domain Atu0161 PF01618 MotA/TolQ/ExbB proton channel family Atu0162 PF02472 Biopolymer transport protein ExbD/TolR Atu0164 PF02615 Malate/L-lactate dehydrogenase Atu0168 PF00625 Guanylate kinase Atu0169 PF07969 Amidohydrolase family Atu0170 PF06299 Protein of unknown function (DUF1045) Atu0171 PF00528 Binding-protein-dependent transport system inner membrane component Atu0172 PF00528 Binding-protein-dependent transport system inner membrane component Atu0174 PF00005 ABC transporter Atu0176 PF00005 ABC transporter Atu0177 PF00005 ABC transporter Atu0178 PF06007 Phosphonate metabolism protein PhnJ Atu0179 PF05861 Bacterial phosphonate metabolism protein (PhnI) Atu0180 PF05845 Bacterial phosphonate metabolism protein (PhnH) Atu0181 PF06754 Phosphonate metabolism protein PhnG Atu0182 PF07702 UTRA domain Atu0182 PF00392 Bacterial regulatory proteins, gntR family Atu0183 PF01113 Dihydrodipicolinate reductase, N-terminus Atu0183 PF05173 Dihydrodipicolinate reductase, C-terminus Atu0184 PF02685 Glucokinase Atu0185 PF02142 MGS-like domain Atu0186 PF03411 Penicillin-insensitive murein endopeptidase Atu0187 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu0188 PF00528 Binding-protein-dependent transport system inner membrane component Atu0189 PF00528 Binding-protein-dependent transport system inner membrane component Atu0189 PF12911 N-terminal TM domain of oligopeptide transport permease C Atu0190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu0190 PF00005 ABC transporter Atu0193 PF00120 Glutamine synthetase, catalytic domain Atu0194 PF01266 FAD dependent oxidoreductase Atu0196 PF00528 Binding-protein-dependent transport system inner membrane component Atu0197 PF00005 ABC transporter Atu0198 PF00528 Binding-protein-dependent transport system inner membrane component Atu0199 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Atu0201 PF02082 Transcriptional regulator Atu0202 PF13416 Bacterial extracellular solute-binding protein Atu0204 PF05987 Bacterial protein of unknown function (DUF898) Atu0205 PF00171 Aldehyde dehydrogenase family Atu0207 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0207 PF03466 LysR substrate binding domain Atu0208 PF00892 EamA-like transporter family Atu0211 PF00877 NlpC/P60 family Atu0213 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Atu0213 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Atu0214 PF00883 Cytosol aminopeptidase family, catalytic domain Atu0214 PF02789 Cytosol aminopeptidase family, N-terminal domain Atu0218 PF00437 Type II/IV secretion system protein Atu0221 PF13629 Pilus formation protein N terminal region Atu0221 PF00263 Bacterial type II and III secretion system protein Atu0221 PF04972 BON domain Atu0232 PF07411 Domain of unknown function (DUF1508) Atu0233 PF01183 Glycosyl hydrolases family 25 Atu0234 PF00892 EamA-like transporter family Atu0235 PF00155 Aminotransferase class I and II Atu0235 PF00392 Bacterial regulatory proteins, gntR family Atu0241 PF03144 Elongation factor Tu domain 2 Atu0241 PF06421 GTP-binding protein LepA C-terminus Atu0241 PF00009 Elongation factor Tu GTP binding domain Atu0241 PF00679 Elongation factor G C-terminus Atu0242 PF00795 Carbon-nitrogen hydrolase Atu0248 PF02311 AraC-like ligand binding domain Atu0248 PF12833 Helix-turn-helix domain Atu0249 PF03480 Bacterial extracellular solute-binding protein, family 7 Atu0254 PF00707 Translation initiation factor IF-3, C-terminal domain Atu0254 PF05198 Translation initiation factor IF-3, N-terminal domain Atu0255 PF01632 Ribosomal protein L35 Atu0256 PF00453 Ribosomal protein L20 Atu0258 PF01409 tRNA synthetases class II core domain (F) Atu0258 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Atu0259 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Atu0259 PF01588 Putative tRNA binding domain Atu0259 PF03147 Ferredoxin-fold anticodon binding domain Atu0259 PF03484 tRNA synthetase B5 domain Atu0259 PF03483 B3/4 domain Atu0260 PF00248 Aldo/keto reductase family Atu0261 PF03466 LysR substrate binding domain Atu0261 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0263 PF00248 Aldo/keto reductase family Atu0264 PF01965 DJ-1/PfpI family Atu0264 PF12833 Helix-turn-helix domain Atu0266 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Atu0266 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu0269 PF13742 OB-fold nucleic acid binding domain Atu0269 PF02601 Exonuclease VII, large subunit Atu0270 PF13378 Enolase C-terminal domain-like Atu0270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu0271 PF07729 FCD domain Atu0271 PF00392 Bacterial regulatory proteins, gntR family Atu0272 PF01047 MarR family Atu0273 PF00892 EamA-like transporter family Atu0274 PF02073 Thermophilic metalloprotease (M29) Atu0275 PF04073 Aminoacyl-tRNA editing domain Atu0276 PF03960 ArsC family Atu0279 PF00440 Bacterial regulatory proteins, tetR family Atu0281 PF00117 Glutamine amidotransferase class-I Atu0281 PF00958 GMP synthase C terminal domain Atu0284 PF03073 TspO/MBR family Atu0289 PF01029 NusB family Atu0289 PF01189 16S rRNA methyltransferase RsmB/F Atu0290 PF03330 Lytic transglycolase Atu0292 PF08331 Domain of unknown function (DUF1730) Atu0293 PF00043 Glutathione S-transferase, C-terminal domain Atu0293 PF13417 Glutathione S-transferase, N-terminal domain Atu0294 PF02673 Bacitracin resistance protein BacA Atu0298 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Atu0300 PF00398 Ribosomal RNA adenine dimethylase Atu0301 PF00712 DNA polymerase III beta subunit, N-terminal domain Atu0301 PF02767 DNA polymerase III beta subunit, central domain Atu0301 PF02768 DNA polymerase III beta subunit, C-terminal domain Atu0302 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu0303 PF02021 Uncharacterised protein family UPF0102 Atu0304 PF14602 Hexapeptide repeat of succinyl-transferase Atu0304 PF12464 Maltose acetyltransferase Atu0305 PF13416 Bacterial extracellular solute-binding protein Atu0306 PF00528 Binding-protein-dependent transport system inner membrane component Atu0307 PF00528 Binding-protein-dependent transport system inner membrane component Atu0308 PF00005 ABC transporter Atu0310 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Atu0310 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Atu0311 PF13335 Magnesium chelatase, subunit ChlI C-terminal Atu0311 PF01078 Magnesium chelatase, subunit ChlI Atu0312 PF00291 Pyridoxal-phosphate dependent enzyme Atu0313 PF01810 LysE type translocator Atu0314 PF00692 dUTPase Atu0315 PF00009 Elongation factor Tu GTP binding domain Atu0315 PF03144 Elongation factor Tu domain 2 Atu0315 PF16658 Class II release factor RF3, C-terminal domain Atu0316 PF02441 Flavoprotein Atu0316 PF04127 DNA / pantothenate metabolism flavoprotein Atu0319 PF03109 ABC1 family Atu0320 PF01209 ubiE/COQ5 methyltransferase family Atu0321 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Atu0321 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Atu0321 PF06827 Zinc finger found in FPG and IleRS Atu0322 PF00378 Enoyl-CoA hydratase/isomerase Atu0323 PF01649 Ribosomal protein S20 Atu0324 PF08299 Bacterial dnaA protein helix-turn-helix Atu0324 PF00308 Bacterial dnaA protein Atu0324 PF11638 DnaA N-terminal domain Atu0325 PF04055 Radical SAM superfamily Atu0325 PF06969 HemN C-terminal domain Atu0326 PF01725 Ham1 family Atu0327 PF03725 3' exoribonuclease family, domain 2 Atu0327 PF01138 3' exoribonuclease family, domain 1 Atu0328 PF01628 HrcA protein C terminal domain Atu0329 PF01025 GrpE Atu0330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Atu0331 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Atu0331 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Atu0332 PF04552 Sigma-54, DNA binding domain Atu0332 PF04963 Sigma-54 factor, core binding domain Atu0332 PF00309 Sigma-54 factor, Activator interacting domain (AID) Atu0333 PF00005 ABC transporter Atu0334 PF03968 OstA-like protein Atu0337 PF01343 Peptidase family S49 Atu0338 PF00216 Bacterial DNA-binding protein Atu0340 PF10672 S-adenosylmethionine-dependent methyltransferase Atu0340 PF01170 Putative RNA methylase family UPF0020 Atu0340 PF02926 THUMP domain Atu0341 PF08032 RNA 2'-O ribose methyltransferase substrate binding Atu0341 PF00588 SpoU rRNA Methylase family Atu0342 PF01252 Signal peptidase (SPase) II Atu0343 PF00672 HAMP domain Atu0343 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0343 PF01627 Hpt domain Atu0343 PF00072 Response regulator receiver domain Atu0343 PF00512 His Kinase A (phospho-acceptor) domain Atu0343 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Atu0345 PF05190 MutS family domain IV Atu0345 PF00488 MutS domain V Atu0345 PF01624 MutS domain I Atu0345 PF05188 MutS domain II Atu0345 PF05192 MutS domain III Atu0346 PF01909 Nucleotidyltransferase domain Atu0346 PF01842 ACT domain Atu0346 PF08335 GlnD PII-uridylyltransferase Atu0346 PF01966 HD domain Atu0347 PF03023 Lipid II flippase MurJ Atu0349 PF00579 tRNA synthetases class I (W and Y) Atu0351 PF01106 NifU-like domain Atu0352 PF00814 Glycoprotease family Atu0354 PF01475 Ferric uptake regulator family Atu0355 PF01553 Acyltransferase Atu0356 PF04055 Radical SAM superfamily Atu0356 PF00919 Uncharacterized protein family UPF0004 Atu0356 PF01938 TRAM domain Atu0357 PF02562 PhoH-like protein Atu0358 PF02130 Uncharacterized protein family UPF0054 Atu0359 PF03471 Transporter associated domain Atu0359 PF00571 CBS domain Atu0360 PF00795 Carbon-nitrogen hydrolase Atu0361 PF01381 Helix-turn-helix Atu0362 PF00438 S-adenosylmethionine synthetase, N-terminal domain Atu0362 PF02773 S-adenosylmethionine synthetase, C-terminal domain Atu0362 PF02772 S-adenosylmethionine synthetase, central domain Atu0363 PF02390 Putative methyltransferase Atu0364 PF00294 pfkB family carbohydrate kinase Atu0365 PF02646 RmuC family Atu0366 PF01327 Polypeptide deformylase Atu0367 PF00551 Formyl transferase Atu0367 PF02911 Formyl transferase, C-terminal domain Atu0368 PF01416 tRNA pseudouridine synthase Atu0370 PF01546 Peptidase family M20/M25/M40 Atu0370 PF07687 Peptidase dimerisation domain Atu0371 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Atu0371 PF14602 Hexapeptide repeat of succinyl-transferase Atu0371 PF00132 Bacterial transferase hexapeptide (six repeats) Atu0373 PF00672 HAMP domain Atu0373 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0374 PF01156 Inosine-uridine preferring nucleoside hydrolase Atu0375 PF00011 Hsp20/alpha crystallin family Atu0380 PF00696 Amino acid kinase family Atu0383 PF01926 50S ribosome-binding GTPase Atu0384 PF14849 YidC periplasmic domain Atu0384 PF02096 60Kd inner membrane protein Atu0385 PF00825 Ribonuclease P Atu0387 PF02203 Tar ligand binding domain homologue Atu0387 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0387 PF00672 HAMP domain Atu0388 PF00512 His Kinase A (phospho-acceptor) domain Atu0388 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0388 PF00672 HAMP domain Atu0390 PF01209 ubiE/COQ5 methyltransferase family Atu0391 PF00005 ABC transporter Atu0392 PF00528 Binding-protein-dependent transport system inner membrane component Atu0393 PF00528 Binding-protein-dependent transport system inner membrane component Atu0395 PF00149 Calcineurin-like phosphoesterase Atu0396 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Atu0396 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Atu0398 PF05544 Proline racemase Atu0399 PF01979 Amidohydrolase family Atu0400 PF00156 Phosphoribosyl transferase domain Atu0401 PF00294 pfkB family carbohydrate kinase Atu0404 PF00342 Phosphoglucose isomerase Atu0405 PF00501 AMP-binding enzyme Atu0405 PF13193 AMP-binding enzyme C-terminal domain Atu0406 PF08402 TOBE domain Atu0406 PF00005 ABC transporter Atu0408 PF00528 Binding-protein-dependent transport system inner membrane component Atu0409 PF00593 TonB dependent receptor Atu0409 PF07715 TonB-dependent Receptor Plug Domain Atu0413 PF01679 Proteolipid membrane potential modulator Atu0418 PF03976 Polyphosphate kinase 2 (PPK2) Atu0419 PF00512 His Kinase A (phospho-acceptor) domain Atu0419 PF00989 PAS fold Atu0419 PF16736 Single Cache-like Atu0419 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0420 PF12849 PBP superfamily domain Atu0421 PF00528 Binding-protein-dependent transport system inner membrane component Atu0422 PF00528 Binding-protein-dependent transport system inner membrane component Atu0423 PF00005 ABC transporter Atu0424 PF01895 PhoU domain Atu0425 PF00072 Response regulator receiver domain Atu0425 PF00486 Transcriptional regulatory protein, C terminal Atu0428 PF00202 Aminotransferase class-III Atu0429 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Atu0429 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Atu0430 PF01430 Hsp33 protein Atu0431 PF04379 ApaG domain Atu0432 PF01053 Cys/Met metabolism PLP-dependent enzyme Atu0434 PF00692 dUTPase Atu0438 PF00589 Phage integrase family Atu0472 PF02469 Fasciclin domain Atu0476 PF00230 Major intrinsic protein Atu0484 PF00072 Response regulator receiver domain Atu0484 PF00196 Bacterial regulatory proteins, luxR family Atu0486 PF01180 Dihydroorotate dehydrogenase Atu0489 PF08241 Methyltransferase domain Atu0493 PF02082 Transcriptional regulator Atu0494 PF00270 DEAD/DEAH box helicase Atu0494 PF08494 DEAD/H associated Atu0494 PF00271 Helicase conserved C-terminal domain Atu0498 PF01925 Sulfite exporter TauE/SafE Atu0501 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu0501 PF02770 Acyl-CoA dehydrogenase, middle domain Atu0501 PF12806 Acetyl-CoA dehydrogenase C-terminal like Atu0501 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu0502 PF02803 Thiolase, C-terminal domain Atu0502 PF00108 Thiolase, N-terminal domain Atu0503 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Atu0503 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Atu0503 PF00378 Enoyl-CoA hydratase/isomerase Atu0507 PF03334 Na+/H+ antiporter subunit Atu0508 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Atu0509 PF01899 Na+/H+ ion antiporter subunit Atu0510 PF00361 Proton-conducting membrane transporter Atu0511 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Atu0514 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0516 PF00072 Response regulator receiver domain Atu0517 PF01584 CheW-like domain Atu0517 PF02895 Signal transducing histidine kinase, homodimeric domain Atu0517 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0517 PF01627 Hpt domain Atu0518 PF03705 CheR methyltransferase, all-alpha domain Atu0518 PF01739 CheR methyltransferase, SAM binding domain Atu0519 PF00072 Response regulator receiver domain Atu0519 PF01339 CheB methylesterase Atu0520 PF00072 Response regulator receiver domain Atu0521 PF03975 CheD chemotactic sensory transduction Atu0523 PF01514 Secretory protein of YscJ/FliF family Atu0523 PF08345 Flagellar M-ring protein C-terminal Atu0524 PF03472 Autoinducer binding domain Atu0524 PF00196 Bacterial regulatory proteins, luxR family Atu0526 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0526 PF00672 HAMP domain Atu0527 PF01627 Hpt domain Atu0527 PF00672 HAMP domain Atu0527 PF00072 Response regulator receiver domain Atu0527 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0527 PF00512 His Kinase A (phospho-acceptor) domain Atu0528 PF01741 Large-conductance mechanosensitive channel, MscL Atu0529 PF00155 Aminotransferase class I and II Atu0530 PF01370 NAD dependent epimerase/dehydratase family Atu0533 PF02545 Maf-like protein Atu0534 PF01176 Translation initiation factor 1A / IF-1 Atu0536 PF06793 Uncharacterised protein family (UPF0262) Atu0537 PF00815 Histidinol dehydrogenase Atu0539 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Atu0542 PF00700 Bacterial flagellin C-terminal helical region Atu0542 PF00669 Bacterial flagellin N-terminal helical region Atu0543 PF00700 Bacterial flagellin C-terminal helical region Atu0543 PF00669 Bacterial flagellin N-terminal helical region Atu0545 PF00700 Bacterial flagellin C-terminal helical region Atu0545 PF00669 Bacterial flagellin N-terminal helical region Atu0546 PF00813 FliP family Atu0548 PF02107 Flagellar L-ring protein Atu0550 PF02119 Flagellar P-ring protein Atu0551 PF13144 Chaperone for flagella basal body P-ring formation Atu0552 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atu0552 PF00460 Flagella basal body rod protein Atu0553 PF02049 Flagellar hook-basal body complex protein FliE Atu0554 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atu0555 PF00460 Flagella basal body rod protein Atu0557 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atu0557 PF18269 T3SS EscN ATPase C-terminal domain Atu0558 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atu0558 PF00460 Flagella basal body rod protein Atu0560 PF01618 MotA/TolQ/ExbB proton channel family Atu0561 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Atu0562 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Atu0563 PF01706 FliG C-terminal domain Atu0563 PF14841 FliG middle domain Atu0563 PF14842 FliG N-terminal domain Atu0564 PF01312 FlhB HrpN YscU SpaS Family Atu0567 PF00700 Bacterial flagellin C-terminal helical region Atu0567 PF00669 Bacterial flagellin N-terminal helical region Atu0569 PF13677 Membrane MotB of proton-channel complex MotA/MotB Atu0569 PF00691 OmpA family Atu0571 PF02120 Flagellar hook-length control protein FliK Atu0573 PF00486 Transcriptional regulatory protein, C terminal Atu0574 PF07559 Flagellar basal body protein FlaE Atu0574 PF00460 Flagella basal body rod protein Atu0574 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atu0578 PF07378 Flagellar protein FlbT Atu0579 PF03963 Flagellar hook capping protein - N-terminal region Atu0580 PF01313 Bacterial export proteins, family 3 Atu0581 PF00771 FHIPEP family Atu0582 PF01311 Bacterial export proteins, family 1 Atu0589 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Atu0589 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Atu0590 PF00356 Bacterial regulatory proteins, lacI family Atu0591 PF01547 Bacterial extracellular solute-binding protein Atu0592 PF00528 Binding-protein-dependent transport system inner membrane component Atu0593 PF00528 Binding-protein-dependent transport system inner membrane component Atu0594 PF00128 Alpha amylase, catalytic domain Atu0595 PF17912 MalK OB fold domain Atu0595 PF00005 ABC transporter Atu0595 PF03459 TOBE domain Atu0598 PF00920 Dehydratase family Atu0599 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Atu0600 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Atu0600 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Atu0601 PF01266 FAD dependent oxidoreductase Atu0602 PF00120 Glutamine synthetase, catalytic domain Atu0607 PF00463 Isocitrate lyase family Atu0608 PF09856 Predicted transcriptional regulator (DUF2083) Atu0608 PF06114 IrrE N-terminal-like domain Atu0608 PF01381 Helix-turn-helix Atu0609 PF13416 Bacterial extracellular solute-binding protein Atu0610 PF08402 TOBE domain Atu0610 PF00005 ABC transporter Atu0611 PF00528 Binding-protein-dependent transport system inner membrane component Atu0612 PF00528 Binding-protein-dependent transport system inner membrane component Atu0614 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0614 PF00512 His Kinase A (phospho-acceptor) domain Atu0614 PF13188 PAS domain Atu0614 PF13426 PAS domain Atu0614 PF00989 PAS fold Atu0619 PF02541 Ppx/GppA phosphatase family Atu0620 PF01728 FtsJ-like methyltransferase Atu0621 PF07690 Major Facilitator Superfamily Atu0622 PF00753 Metallo-beta-lactamase superfamily Atu0624 PF00571 CBS domain Atu0624 PF00478 IMP dehydrogenase / GMP reductase domain Atu0626 PF00107 Zinc-binding dehydrogenase Atu0626 PF08240 Alcohol dehydrogenase GroES-like domain Atu0627 PF01738 Dienelactone hydrolase family Atu0628 PF00672 HAMP domain Atu0628 PF00512 His Kinase A (phospho-acceptor) domain Atu0628 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0629 PF00486 Transcriptional regulatory protein, C terminal Atu0629 PF00072 Response regulator receiver domain Atu0631 PF00994 Probable molybdopterin binding domain Atu0632 PF00288 GHMP kinases N terminal domain Atu0632 PF08544 GHMP kinases C terminal Atu0634 PF00348 Polyprenyl synthetase Atu0637 PF01343 Peptidase family S49 Atu0637 PF06965 Na+/H+ antiporter 1 Atu0639 PF02091 Glycyl-tRNA synthetase alpha subunit Atu0641 PF04011 LemA family Atu0642 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Atu0644 PF02092 Glycyl-tRNA synthetase beta subunit Atu0644 PF05746 DALR anticodon binding domain Atu0645 PF04463 Protein of unknown function (DUF523) Atu0646 PF00672 HAMP domain Atu0646 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0647 PF02844 Phosphoribosylglycinamide synthetase, N domain Atu0647 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Atu0647 PF02843 Phosphoribosylglycinamide synthetase, C domain Atu0648 PF09371 Tex-like protein N-terminal domain Atu0648 PF00575 S1 RNA binding domain Atu0648 PF16921 Tex protein YqgF-like domain Atu0648 PF17674 HHH domain Atu0651 PF01040 UbiA prenyltransferase family Atu0654 PF03466 LysR substrate binding domain Atu0654 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0656 PF04107 Glutamate-cysteine ligase family 2(GCS2) Atu0657 PF04452 RNA methyltransferase Atu0658 PF01384 Phosphate transporter family Atu0660 PF05116 Sucrose-6F-phosphate phosphohydrolase Atu0661 PF13439 Glycosyltransferase Family 4 Atu0661 PF00534 Glycosyl transferases group 1 Atu0662 PF07729 FCD domain Atu0662 PF00392 Bacterial regulatory proteins, gntR family Atu0664 PF03466 LysR substrate binding domain Atu0664 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0665 PF02913 FAD linked oxidases, C-terminal domain Atu0665 PF01565 FAD binding domain Atu0666 PF02913 FAD linked oxidases, C-terminal domain Atu0666 PF01565 FAD binding domain Atu0667 PF13183 4Fe-4S dicluster domain Atu0667 PF02754 Cysteine-rich domain Atu0669 PF17969 L,D-transpeptidase C-terminal domain Atu0669 PF03734 L,D-transpeptidase catalytic domain Atu0670 PF03352 Methyladenine glycosylase Atu0670 PF13302 Acetyltransferase (GNAT) domain Atu0670 PF13673 Acetyltransferase (GNAT) domain Atu0670 PF00958 GMP synthase C terminal domain Atu0670 PF00117 Glutamine amidotransferase class-I Atu0671 PF03601 Conserved hypothetical protein 698 Atu0672 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0672 PF03466 LysR substrate binding domain Atu0676 PF13393 Histidyl-tRNA synthetase Atu0676 PF03129 Anticodon binding domain Atu0678 PF13393 Histidyl-tRNA synthetase Atu0679 PF01634 ATP phosphoribosyltransferase Atu0680 PF07681 DoxX Atu0682 PF00118 TCP-1/cpn60 chaperonin family Atu0683 PF00166 Chaperonin 10 Kd subunit Atu0685 PF06574 FAD synthetase Atu0685 PF01687 Riboflavin kinase Atu0686 PF08264 Anticodon-binding domain of tRNA Atu0686 PF00133 tRNA synthetases class I (I, L, M and V) Atu0688 PF14437 MafB19-like deaminase Atu0689 PF01479 S4 domain Atu0689 PF00849 RNA pseudouridylate synthase Atu0691 PF01734 Patatin-like phospholipase Atu0692 PF00999 Sodium/hydrogen exchanger family Atu0692 PF02254 TrkA-N domain Atu0693 PF01523 Putative modulator of DNA gyrase Atu0694 PF00459 Inositol monophosphatase family Atu0697 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Atu0699 PF08676 MutL C terminal dimerisation domain Atu0699 PF01119 DNA mismatch repair protein, C-terminal domain Atu0700 PF09456 RcsC Alpha-Beta-Loop (ABL) Atu0700 PF00072 Response regulator receiver domain Atu0700 PF00512 His Kinase A (phospho-acceptor) domain Atu0700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0701 PF00990 Diguanylate cyclase, GGDEF domain Atu0701 PF03707 Bacterial signalling protein N terminal repeat Atu0701 PF13188 PAS domain Atu0701 PF00563 EAL domain Atu0702 PF08450 SMP-30/Gluconolactonase/LRE-like region Atu0703 PF01081 KDPG and KHG aldolase Atu0704 PF05035 2-keto-3-deoxy-galactonokinase Atu0707 PF00196 Bacterial regulatory proteins, luxR family Atu0707 PF03472 Autoinducer binding domain Atu0709 PF10609 NUBPL iron-transfer P-loop NTPase Atu0710 PF01544 CorA-like Mg2+ transporter protein Atu0711 PF02705 K+ potassium transporter Atu0713 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter Atu0714 PF00119 ATP synthase A chain Atu0715 PF00137 ATP synthase subunit C Atu0716 PF00430 ATP synthase B/B' CF(0) Atu0717 PF00430 ATP synthase B/B' CF(0) Atu0719 PF00132 Bacterial transferase hexapeptide (six repeats) Atu0720 PF01351 Ribonuclease HII Atu0723 PF01565 FAD binding domain Atu0723 PF02913 FAD linked oxidases, C-terminal domain Atu0724 PF03481 Putative GTP-binding controlling metal-binding Atu0724 PF01300 Telomere recombination Atu0726 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Atu0726 PF00355 Rieske [2Fe-2S] domain Atu0727 PF00175 Oxidoreductase NAD-binding domain Atu0727 PF00111 2Fe-2S iron-sulfur cluster binding domain Atu0727 PF00970 Oxidoreductase FAD-binding domain Atu0728 PF07886 BA14K-like protein Atu0730 PF07886 BA14K-like protein Atu0732 PF12806 Acetyl-CoA dehydrogenase C-terminal like Atu0732 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu0732 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu0732 PF02770 Acyl-CoA dehydrogenase, middle domain Atu0735 PF05958 tRNA (Uracil-5-)-methyltransferase Atu0736 PF01479 S4 domain Atu0736 PF01728 FtsJ-like methyltransferase Atu0738 PF00672 HAMP domain Atu0738 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0745 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Atu0745 PF02779 Transketolase, pyrimidine binding domain Atu0745 PF02780 Transketolase, C-terminal domain Atu0746 PF02678 Pirin Atu0746 PF05726 Pirin C-terminal cupin domain Atu0747 PF02609 Exonuclease VII small subunit Atu0748 PF00850 Histone deacetylase domain Atu0749 PF02632 BioY family Atu0750 PF02361 Cobalt transport protein Atu0751 PF00005 ABC transporter Atu0752 PF06224 Winged helix DNA-binding domain Atu0753 PF00925 GTP cyclohydrolase II Atu0753 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Atu0754 PF01264 Chorismate synthase Atu0756 PF00300 Histidine phosphatase superfamily (branch 1) Atu0758 PF01556 DnaJ C terminal domain Atu0758 PF00684 DnaJ central domain Atu0758 PF00226 DnaJ domain Atu0760 PF01243 Pyridoxamine 5'-phosphate oxidase Atu0760 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Atu0763 PF13419 Haloacid dehalogenase-like hydrolase Atu0765 PF01523 Putative modulator of DNA gyrase Atu0767 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Atu0767 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Atu0768 PF00115 Cytochrome C and Quinol oxidase polypeptide I Atu0769 PF01040 UbiA prenyltransferase family Atu0770 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 Atu0771 PF00510 Cytochrome c oxidase subunit III Atu0773 PF02104 SURF1 family Atu0774 PF02401 LytB protein Atu0775 PF01636 Phosphotransferase enzyme family Atu0776 PF00075 RNase H Atu0779 PF08534 Redoxin Atu0779 PF00462 Glutaredoxin Atu0781 PF02622 Uncharacterized ACR, COG1678 Atu0783 PF15887 Putative zinc-binding metallo-peptidase Atu0783 PF10005 zinc-ribbon domain Atu0784 PF13185 GAF domain Atu0784 PF00563 EAL domain Atu0784 PF00990 Diguanylate cyclase, GGDEF domain Atu0785 PF13302 Acetyltransferase (GNAT) domain Atu0786 PF05193 Peptidase M16 inactive domain Atu0786 PF00675 Insulinase (Peptidase family M16) Atu0787 PF00291 Pyridoxal-phosphate dependent enzyme Atu0787 PF14821 Threonine synthase N terminus Atu0790 PF13419 Haloacid dehalogenase-like hydrolase Atu0791 PF00392 Bacterial regulatory proteins, gntR family Atu0791 PF07729 FCD domain Atu0794 PF18755 Restriction Enzyme Adenine Methylase Associated Atu0794 PF01555 DNA methylase Atu0798 PF00730 HhH-GPD superfamily base excision DNA repair protein Atu0798 PF14815 NUDIX domain Atu0800 PF13462 Thioredoxin Atu0801 PF02463 RecF/RecN/SMC N terminal domain Atu0802 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu0803 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Atu0803 PF00391 PEP-utilising enzyme, mobile domain Atu0803 PF02896 PEP-utilising enzyme, TIM barrel domain Atu0804 PF00375 Sodium:dicarboxylate symporter family Atu0811 PF06039 Malate:quinone oxidoreductase (Mqo) Atu0816 PF00009 Elongation factor Tu GTP binding domain Atu0817 PF01507 Phosphoadenosine phosphosulfate reductase family Atu0818 PF01507 Phosphoadenosine phosphosulfate reductase family Atu0819 PF02082 Transcriptional regulator Atu0821 PF00528 Binding-protein-dependent transport system inner membrane component Atu0822 PF00528 Binding-protein-dependent transport system inner membrane component Atu0823 PF00005 ABC transporter Atu0823 PF12857 TOBE-like domain Atu0825 PF02801 Beta-ketoacyl synthase, C-terminal domain Atu0825 PF00698 Acyl transferase domain Atu0825 PF14765 Polyketide synthase dehydratase Atu0825 PF08240 Alcohol dehydrogenase GroES-like domain Atu0825 PF00550 Phosphopantetheine attachment site Atu0825 PF08659 KR domain Atu0825 PF16197 Ketoacyl-synthetase C-terminal extension Atu0825 PF00109 Beta-ketoacyl synthase, N-terminal domain Atu0825 PF00107 Zinc-binding dehydrogenase Atu0826 PF00990 Diguanylate cyclase, GGDEF domain Atu0826 PF00563 EAL domain Atu0826 PF00989 PAS fold Atu0826 PF01590 GAF domain Atu0828 PF13977 BetI-type transcriptional repressor, C-terminal Atu0828 PF00440 Bacterial regulatory proteins, tetR family Atu0829 PF00171 Aldehyde dehydrogenase family Atu0830 PF00732 GMC oxidoreductase Atu0830 PF05199 GMC oxidoreductase Atu0832 PF00654 Voltage gated chloride channel Atu0838 PF07690 Major Facilitator Superfamily Atu0840 PF04675 DNA ligase N terminus Atu0840 PF01068 ATP dependent DNA ligase domain Atu0840 PF04679 ATP dependent DNA ligase C terminal region Atu0842 PF04488 Glycosyltransferase sugar-binding region containing DXD motif Atu0843 PF00403 Heavy-metal-associated domain Atu0844 PF03734 L,D-transpeptidase catalytic domain Atu0844 PF17969 L,D-transpeptidase C-terminal domain Atu0845 PF03734 L,D-transpeptidase catalytic domain Atu0845 PF17969 L,D-transpeptidase C-terminal domain Atu0846 PF01047 MarR family Atu0847 PF02566 OsmC-like protein Atu0850 PF00005 ABC transporter Atu0850 PF16326 ABC transporter C-terminal domain Atu0850 PF12848 ABC transporter Atu0852 PF01047 MarR family Atu0856 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0856 PF03466 LysR substrate binding domain Atu0857 PF00106 short chain dehydrogenase Atu0860 PF05872 Bacterial protein of unknown function (DUF853) Atu0863 PF01638 HxlR-like helix-turn-helix Atu0864 PF00106 short chain dehydrogenase Atu0865 PF12833 Helix-turn-helix domain Atu0867 PF00248 Aldo/keto reductase family Atu0868 PF13280 WYL domain Atu0868 PF08279 HTH domain Atu0871 PF01063 Amino-transferase class IV Atu0872 PF00672 HAMP domain Atu0872 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0873 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0873 PF03466 LysR substrate binding domain Atu0876 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Atu0876 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Atu0878 PF13280 WYL domain Atu0878 PF08279 HTH domain Atu0879 PF01810 LysE type translocator Atu0881 PF01322 Cytochrome C' Atu0882 PF00034 Cytochrome c Atu0888 PF09278 MerR, DNA binding Atu0888 PF00376 MerR family regulatory protein Atu0890 PF02583 Metal-sensitive transcriptional repressor Atu0891 PF01545 Cation efflux family Atu0893 PF00005 ABC transporter Atu0893 PF00571 CBS domain Atu0894 PF00528 Binding-protein-dependent transport system inner membrane component Atu0897 PF00326 Prolyl oligopeptidase family Atu0897 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Atu0899 PF00701 Dihydrodipicolinate synthetase family Atu0901 PF02805 Metal binding domain of Ada Atu0901 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Atu0901 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Atu0901 PF12833 Helix-turn-helix domain Atu0903 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu0906 PF03006 Haemolysin-III related Atu0908 PF01641 SelR domain Atu0909 PF13244 Domain of unknown function (DUF4040) Atu0909 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Atu0909 PF00361 Proton-conducting membrane transporter Atu0910 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Atu0911 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Atu0912 PF00361 Proton-conducting membrane transporter Atu0913 PF01899 Na+/H+ ion antiporter subunit Atu0914 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Atu0915 PF03334 Na+/H+ antiporter subunit Atu0916 PF05443 ROS/MUCR transcriptional regulator protein Atu0919 PF02657 Fe-S metabolism associated domain Atu0920 PF17264 Family of unknown function (DUF5330) Atu0921 PF00512 His Kinase A (phospho-acceptor) domain Atu0921 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0927 PF01810 LysE type translocator Atu0928 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0928 PF03466 LysR substrate binding domain Atu0929 PF00144 Beta-lactamase Atu0931 PF00905 Penicillin binding protein transpeptidase domain Atu0931 PF00912 Transglycosylase Atu0932 PF03692 Putative zinc- or iron-chelating domain Atu0933 PF00905 Penicillin binding protein transpeptidase domain Atu0934 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ Atu0935 PF04221 RelB antitoxin Atu0937 PF00403 Heavy-metal-associated domain Atu0938 PF09278 MerR, DNA binding Atu0938 PF00376 MerR family regulatory protein Atu0940 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Atu0942 PF07690 Major Facilitator Superfamily Atu0944 PF00251 Glycosyl hydrolases family 32 N-terminal domain Atu0944 PF08244 Glycosyl hydrolases family 32 C terminal Atu0945 PF02696 Uncharacterized ACR, YdiU/UPF0061 family Atu0947 PF01037 Lrp/AsnC ligand binding domain Atu0947 PF13404 AsnC-type helix-turn-helix domain Atu0954 PF04860 Phage portal protein Atu0970 PF00072 Response regulator receiver domain Atu0970 PF00486 Transcriptional regulatory protein, C terminal Atu0971 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0974 PF03100 CcmE Atu0975 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Atu0975 PF01578 Cytochrome C assembly protein Atu0976 PF03918 Cytochrome C biogenesis protein Atu0977 PF13180 PDZ domain Atu0978 PF00486 Transcriptional regulatory protein, C terminal Atu0978 PF00072 Response regulator receiver domain Atu0979 PF00512 His Kinase A (phospho-acceptor) domain Atu0979 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0979 PF00672 HAMP domain Atu0981 PF03710 Glutamate-ammonia ligase adenylyltransferase Atu0981 PF08335 GlnD PII-uridylyltransferase Atu0982 PF00512 His Kinase A (phospho-acceptor) domain Atu0982 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0982 PF00989 PAS fold Atu0984 PF01433 Peptidase family M1 domain Atu0984 PF11940 Domain of unknown function (DUF3458) Ig-like fold Atu0984 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Atu0985 PF00892 EamA-like transporter family Atu0988 PF00012 Hsp70 protein Atu0989 PF00563 EAL domain Atu0989 PF00990 Diguanylate cyclase, GGDEF domain Atu0989 PF03707 Bacterial signalling protein N terminal repeat Atu0993 PF00440 Bacterial regulatory proteins, tetR family Atu0993 PF16925 Tetracyclin repressor-like, C-terminal domain Atu0996 PF00107 Zinc-binding dehydrogenase Atu0996 PF08240 Alcohol dehydrogenase GroES-like domain Atu0997 PF01638 HxlR-like helix-turn-helix Atu0998 PF02673 Bacitracin resistance protein BacA Atu0999 PF03448 MgtE intracellular N domain Atu0999 PF00571 CBS domain Atu0999 PF01769 Divalent cation transporter Atu1000 PF07690 Major Facilitator Superfamily Atu1001 PF00781 Diacylglycerol kinase catalytic domain Atu1002 PF00202 Aminotransferase class-III Atu1005 PF09957 Bacterial antitoxin of type II TA system, VapB Atu1006 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus Atu1006 PF01048 Phosphorylase superfamily Atu1011 PF00155 Aminotransferase class I and II Atu1013 PF14759 Reductase C-terminal Atu1013 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu1014 PF03328 HpcH/HpaI aldolase/citrate lyase family Atu1020 PF02530 Porin subfamily Atu1021 PF02530 Porin subfamily Atu1022 PF01464 Transglycosylase SLT domain Atu1022 PF14718 Soluble lytic murein transglycosylase L domain Atu1024 PF00701 Dihydrodipicolinate synthetase family Atu1025 PF01668 SmpB protein Atu1027 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu1029 PF01192 RNA polymerase Rpb6 Atu1030 PF13291 ACT domain Atu1030 PF02824 TGS domain Atu1030 PF04607 Region found in RelA / SpoT proteins Atu1033 PF01648 4'-phosphopantetheinyl transferase superfamily Atu1034 PF10502 Signal peptidase, peptidase S26 Atu1035 PF14622 Ribonuclease-III-like Atu1035 PF00035 Double-stranded RNA binding motif Atu1036 PF01926 50S ribosome-binding GTPase Atu1036 PF07650 KH domain Atu1037 PF00027 Cyclic nucleotide-binding domain Atu1037 PF13545 Crp-like helix-turn-helix domain Atu1038 PF00072 Response regulator receiver domain Atu1039 PF02565 Recombination protein O C terminal Atu1039 PF11967 Recombination protein O N terminal Atu1040 PF07690 Major Facilitator Superfamily Atu1041 PF08241 Methyltransferase domain Atu1043 PF01966 HD domain Atu1045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu1047 PF00005 ABC transporter Atu1048 PF00528 Binding-protein-dependent transport system inner membrane component Atu1049 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment Atu1050 PF00924 Mechanosensitive ion channel Atu1050 PF05552 Conserved TM helix Atu1052 PF01966 HD domain Atu1053 PF01571 Aminomethyltransferase folate-binding domain Atu1057 PF00293 NUDIX domain Atu1058 PF02694 Uncharacterised BCR, YnfA/UPF0060 family Atu1060 PF00990 Diguanylate cyclase, GGDEF domain Atu1060 PF00072 Response regulator receiver domain Atu1062 PF01066 CDP-alcohol phosphatidyltransferase Atu1063 PF02666 Phosphatidylserine decarboxylase Atu1064 PF00005 ABC transporter Atu1064 PF00664 ABC transporter transmembrane region Atu1066 PF03641 Possible lysine decarboxylase Atu1067 PF03717 Penicillin-binding Protein dimerisation domain Atu1067 PF00905 Penicillin binding protein transpeptidase domain Atu1068 PF00892 EamA-like transporter family Atu1069 PF00561 alpha/beta hydrolase fold Atu1072 PF04480 Protein of unknown function (DUF559) Atu1073 PF01406 tRNA synthetases class I (C) catalytic domain Atu1073 PF09190 DALR domain Atu1074 PF00106 short chain dehydrogenase Atu1075 PF00156 Phosphoribosyl transferase domain Atu1075 PF13537 Glutamine amidotransferase domain Atu1076 PF02674 Colicin V production protein Atu1077 PF06745 KaiC Atu1077 PF18073 Rubredoxin metal binding domain Atu1080 PF00842 Alanine racemase, C-terminal domain Atu1080 PF01168 Alanine racemase, N-terminal domain Atu1081 PF12852 Cupin Atu1081 PF12833 Helix-turn-helix domain Atu1082 PF03591 AzlC protein Atu1084 PF03796 DnaB-like helicase C terminal domain Atu1084 PF00772 DnaB-like helicase N terminal domain Atu1085 PF01047 MarR family Atu1087 PF13533 Biotin-lipoyl like Atu1088 PF01281 Ribosomal protein L9, N-terminal domain Atu1088 PF03948 Ribosomal protein L9, C-terminal domain Atu1090 PF01084 Ribosomal protein S18 Atu1091 PF01250 Ribosomal protein S6 Atu1093 PF00248 Aldo/keto reductase family Atu1094 PF00698 Acyl transferase domain Atu1096 PF00550 Phosphopantetheine attachment site Atu1097 PF02801 Beta-ketoacyl synthase, C-terminal domain Atu1097 PF00109 Beta-ketoacyl synthase, N-terminal domain Atu1099 PF02618 YceG-like family Atu1100 PF03755 YicC-like family, N-terminal region Atu1100 PF08340 Domain of unknown function (DUF1732) Atu1101 PF00625 Guanylate kinase Atu1102 PF01738 Dienelactone hydrolase family Atu1103 PF00398 Ribosomal RNA adenine dimethylase Atu1104 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Atu1106 PF04453 LPS transport system D Atu1106 PF03968 OstA-like protein Atu1110 PF02789 Cytosol aminopeptidase family, N-terminal domain Atu1110 PF00883 Cytosol aminopeptidase family, catalytic domain Atu1112 PF03707 Bacterial signalling protein N terminal repeat Atu1112 PF00990 Diguanylate cyclase, GGDEF domain Atu1112 PF00563 EAL domain Atu1113 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu1114 PF00990 Diguanylate cyclase, GGDEF domain Atu1114 PF03707 Bacterial signalling protein N terminal repeat Atu1114 PF00563 EAL domain Atu1115 PF00512 His Kinase A (phospho-acceptor) domain Atu1115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1115 PF00989 PAS fold Atu1116 PF00196 Bacterial regulatory proteins, luxR family Atu1116 PF00072 Response regulator receiver domain Atu1118 PF12848 ABC transporter Atu1118 PF00005 ABC transporter Atu1119 PF00990 Diguanylate cyclase, GGDEF domain Atu1119 PF17158 Membrane-associated sensor, integral membrane domain Atu1121 PF13417 Glutathione S-transferase, N-terminal domain Atu1122 PF00334 Nucleoside diphosphate kinase Atu1126 PF02391 MoaE protein Atu1127 PF02597 ThiS family Atu1128 PF01066 CDP-alcohol phosphatidyltransferase Atu1129 PF02151 UvrB/uvrC motif Atu1129 PF08459 UvrC Helix-hairpin-helix N-terminal Atu1129 PF01541 GIY-YIG catalytic domain Atu1131 PF13505 Outer membrane protein beta-barrel domain Atu1132 PF00043 Glutathione S-transferase, C-terminal domain Atu1132 PF13417 Glutathione S-transferase, N-terminal domain Atu1133 PF00445 Ribonuclease T2 family Atu1135 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ Atu1136 PF01568 Molydopterin dinucleotide binding domain Atu1136 PF00384 Molybdopterin oxidoreductase Atu1136 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Atu1137 PF00293 NUDIX domain Atu1140 PF00551 Formyl transferase Atu1141 PF00586 AIR synthase related protein, N-terminal domain Atu1141 PF02769 AIR synthase related protein, C-terminal domain Atu1142 PF01594 AI-2E family transporter Atu1144 PF17941 Polyphosphate kinase C-terminal domain 1 Atu1144 PF13090 Polyphosphate kinase C-terminal domain 2 Atu1144 PF13089 Polyphosphate kinase N-terminal domain Atu1144 PF02503 Polyphosphate kinase middle domain Atu1145 PF02541 Ppx/GppA phosphatase family Atu1146 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1149 PF00211 Adenylate and Guanylate cyclase catalytic domain Atu1151 PF00570 HRDC domain Atu1151 PF01612 3'-5' exonuclease Atu1152 PF07690 Major Facilitator Superfamily Atu1153 PF00152 tRNA synthetases class II (D, K and N) Atu1153 PF01336 OB-fold nucleic acid binding domain Atu1153 PF02938 GAD domain Atu1155 PF06123 Inner membrane protein CreD Atu1156 PF00916 Sulfate permease family Atu1156 PF01740 STAS domain Atu1158 PF00521 DNA gyrase/topoisomerase IV, subunit A Atu1158 PF03989 DNA gyrase C-terminal domain, beta-propeller Atu1159 PF04377 Arginine-tRNA-protein transferase, C terminus Atu1159 PF04376 Arginine-tRNA-protein transferase, N terminus Atu1161 PF00490 Delta-aminolevulinic acid dehydratase Atu1165 PF00464 Serine hydroxymethyltransferase Atu1166 PF03477 ATP cone domain Atu1169 PF00677 Lumazine binding domain Atu1170 PF01810 LysE type translocator Atu1171 PF00885 6,7-dimethyl-8-ribityllumazine synthase Atu1172 PF01029 NusB family Atu1173 PF07690 Major Facilitator Superfamily Atu1174 PF03030 Inorganic H+ pyrophosphatase Atu1178 PF02504 Fatty acid synthesis protein Atu1179 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Atu1179 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Atu1180 PF00216 Bacterial DNA-binding protein Atu1181 PF13411 MerR HTH family regulatory protein Atu1195 PF00403 Heavy-metal-associated domain Atu1196 PF00970 Oxidoreductase FAD-binding domain Atu1196 PF00175 Oxidoreductase NAD-binding domain Atu1196 PF00111 2Fe-2S iron-sulfur cluster binding domain Atu1197 PF09278 MerR, DNA binding Atu1197 PF00376 MerR family regulatory protein Atu1198 PF00528 Binding-protein-dependent transport system inner membrane component Atu1199 PF00528 Binding-protein-dependent transport system inner membrane component Atu1199 PF12911 N-terminal TM domain of oligopeptide transport permease C Atu1200 PF00005 ABC transporter Atu1200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu1201 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu1201 PF00005 ABC transporter Atu1202 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu1204 PF02386 Cation transport protein Atu1205 PF00585 C-terminal regulatory domain of Threonine dehydratase Atu1205 PF00291 Pyridoxal-phosphate dependent enzyme Atu1207 PF00072 Response regulator receiver domain Atu1207 PF00990 Diguanylate cyclase, GGDEF domain Atu1208 PF02525 Flavodoxin-like fold Atu1209 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu1209 PF03466 LysR substrate binding domain Atu1210 PF00149 Calcineurin-like phosphoesterase Atu1210 PF02872 5'-nucleotidase, C-terminal domain Atu1215 PF00581 Rhodanese-like domain Atu1216 PF01411 tRNA synthetases class II (A) Atu1216 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Atu1216 PF02272 DHHA1 domain Atu1217 PF00571 CBS domain Atu1217 PF00291 Pyridoxal-phosphate dependent enzyme Atu1218 PF00875 DNA photolyase Atu1218 PF03441 FAD binding domain of DNA photolyase Atu1220 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Atu1220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Atu1226 PF06055 Exopolysaccharide synthesis, ExoD Atu1236 PF02397 Bacterial sugar transferase Atu1237 PF13439 Glycosyltransferase Family 4 Atu1237 PF00534 Glycosyl transferases group 1 Atu1242 PF02628 Cytochrome oxidase assembly protein Atu1243 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase Atu1244 PF01118 Semialdehyde dehydrogenase, NAD binding domain Atu1245 PF00491 Arginase family Atu1246 PF00380 Ribosomal protein S9/S16 Atu1247 PF00572 Ribosomal protein L13 Atu1250 PF13380 CoA binding domain Atu1251 PF01053 Cys/Met metabolism PLP-dependent enzyme Atu1256 PF00067 Cytochrome P450 Atu1257 PF00990 Diguanylate cyclase, GGDEF domain Atu1258 PF00574 Clp protease Atu1259 PF10431 C-terminal, D2-small domain, of ClpB protein Atu1259 PF07724 AAA domain (Cdc48 subfamily) Atu1259 PF06689 ClpX C4-type zinc finger Atu1261 PF00004 ATPase family associated with various cellular activities (AAA) Atu1261 PF05362 Lon protease (S16) C-terminal proteolytic domain Atu1261 PF02190 ATP-dependent protease La (LON) substrate-binding domain Atu1262 PF00216 Bacterial DNA-binding protein Atu1268 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Atu1269 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Atu1270 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Atu1272 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Atu1275 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Atu1275 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Atu1275 PF10531 SLBB domain Atu1276 PF00384 Molybdopterin oxidoreductase Atu1276 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Atu1276 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal Atu1277 PF00146 NADH dehydrogenase Atu1278 PF12838 4Fe-4S dicluster domain Atu1279 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Atu1280 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Atu1281 PF00361 Proton-conducting membrane transporter Atu1281 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Atu1282 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus Atu1282 PF00361 Proton-conducting membrane transporter Atu1283 PF00361 Proton-conducting membrane transporter Atu1284 PF08279 HTH domain Atu1284 PF02237 Biotin protein ligase C terminal domain Atu1284 PF03099 Biotin/lipoate A/B protein ligase family Atu1285 PF17770 Ribonuclease J C-terminal domain Atu1285 PF12706 Beta-lactamase superfamily domain Atu1285 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Atu1288 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Atu1288 PF03129 Anticodon binding domain Atu1289 PF12704 MacB-like periplasmic core domain Atu1289 PF02687 FtsX-like permease family Atu1290 PF00005 ABC transporter Atu1292 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Atu1292 PF02811 PHP domain Atu1292 PF07733 Bacterial DNA polymerase III alpha NTPase domain Atu1292 PF14579 Helix-hairpin-helix motif Atu1294 PF00817 impB/mucB/samB family Atu1294 PF11799 impB/mucB/samB family C-terminal domain Atu1296 PF00072 Response regulator receiver domain Atu1297 PF00990 Diguanylate cyclase, GGDEF domain Atu1297 PF00072 Response regulator receiver domain Atu1299 PF00471 Ribosomal protein L33 Atu1300 PF07690 Major Facilitator Superfamily Atu1303 PF17876 Cold shock domain Atu1303 PF00575 S1 RNA binding domain Atu1303 PF08461 Ribonuclease R winged-helix domain Atu1303 PF08206 Ribonuclease B OB domain Atu1303 PF00773 RNB domain Atu1304 PF01751 Toprim domain Atu1304 PF01396 Topoisomerase DNA binding C4 zinc finger Atu1304 PF01131 DNA topoisomerase Atu1304 PF13368 Topoisomerase C-terminal repeat Atu1305 PF17782 DprA winged helix domain Atu1305 PF02481 DNA recombination-mediator protein A Atu1306 PF02660 Glycerol-3-phosphate acyltransferase Atu1307 PF01979 Amidohydrolase family Atu1308 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Atu1308 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Atu1310 PF18158 Adaptive response protein AidB N-terminal domain Atu1310 PF02770 Acyl-CoA dehydrogenase, middle domain Atu1310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu1311 PF00583 Acetyltransferase (GNAT) family Atu1316 PF03652 Holliday junction resolvase Atu1318 PF02686 Glu-tRNAGln amidotransferase C subunit Atu1319 PF01425 Amidase Atu1320 PF00583 Acetyltransferase (GNAT) family Atu1320 PF13673 Acetyltransferase (GNAT) domain Atu1321 PF09857 Putative toxin of bacterial toxin-antitoxin pair Atu1324 PF02934 GatB/GatE catalytic domain Atu1324 PF02637 GatB domain Atu1326 PF00583 Acetyltransferase (GNAT) family Atu1329 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Atu1330 PF00289 Biotin carboxylase, N-terminal domain Atu1330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atu1330 PF02785 Biotin carboxylase C-terminal domain Atu1331 PF00364 Biotin-requiring enzyme Atu1332 PF01220 Dehydroquinase class II Atu1333 PF06965 Na+/H+ antiporter 1 Atu1333 PF13462 Thioredoxin Atu1334 PF00155 Aminotransferase class I and II Atu1339 PF12111 Polyribonucleotide phosphorylase C terminal Atu1339 PF00575 S1 RNA binding domain Atu1339 PF10150 Ribonuclease E/G family Atu1340 PF01520 N-acetylmuramoyl-L-alanine amidase Atu1341 PF00905 Penicillin binding protein transpeptidase domain Atu1341 PF00912 Transglycosylase Atu1341 PF17092 Penicillin-binding protein OB-like domain Atu1342 PF03462 PCRF domain Atu1342 PF00472 RF-1 domain Atu1345 PF01513 ATP-NAD kinase Atu1346 PF02567 Phenazine biosynthesis-like protein Atu1347 PF03764 Elongation factor G, domain IV Atu1347 PF00679 Elongation factor G C-terminus Atu1347 PF00009 Elongation factor Tu GTP binding domain Atu1350 PF00111 2Fe-2S iron-sulfur cluster binding domain Atu1352 PF00809 Pterin binding enzyme Atu1353 PF02152 Dihydroneopterin aldolase Atu1354 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Atu1356 PF05128 Domain of unknown function (DUF697) Atu1357 PF04317 YcjX-like family, DUF463 Atu1359 PF01258 Prokaryotic dksA/traR C4-type zinc finger Atu1362 PF00072 Response regulator receiver domain Atu1362 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1362 PF00512 His Kinase A (phospho-acceptor) domain Atu1362 PF08448 PAS fold Atu1362 PF13188 PAS domain Atu1363 PF02617 ATP-dependent Clp protease adaptor protein ClpS Atu1364 PF17871 AAA lid domain Atu1364 PF02861 Clp amino terminal domain, pathogenicity island component Atu1364 PF07724 AAA domain (Cdc48 subfamily) Atu1364 PF10431 C-terminal, D2-small domain, of ClpB protein Atu1364 PF00004 ATPase family associated with various cellular activities (AAA) Atu1367 PF03466 LysR substrate binding domain Atu1367 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu1369 PF01230 HIT domain Atu1374 PF00318 Ribosomal protein S2 Atu1375 PF00889 Elongation factor TS Atu1376 PF00696 Amino acid kinase family Atu1377 PF01765 Ribosome recycling factor Atu1378 PF01255 Putative undecaprenyl diphosphate synthase Atu1380 PF02163 Peptidase family M50 Atu1380 PF17820 PDZ domain Atu1381 PF01103 Surface antigen Atu1381 PF07244 Surface antigen variable number repeat Atu1382 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1382 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Atu1383 PF07977 FabA-like domain Atu1384 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1384 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Atu1385 PF06230 LpxI C-terminal domain Atu1385 PF17930 LpxI N-terminal domain Atu1386 PF02684 Lipid-A-disaccharide synthetase Atu1387 PF07729 FCD domain Atu1387 PF00392 Bacterial regulatory proteins, gntR family Atu1388 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu1389 PF00528 Binding-protein-dependent transport system inner membrane component Atu1390 PF00528 Binding-protein-dependent transport system inner membrane component Atu1391 PF00005 ABC transporter Atu1392 PF00285 Citrate synthase, C-terminal domain Atu1395 PF01726 LexA DNA binding domain Atu1395 PF00717 Peptidase S24-like Atu1396 PF00005 ABC transporter Atu1397 PF00528 Binding-protein-dependent transport system inner membrane component Atu1398 PF00528 Binding-protein-dependent transport system inner membrane component Atu1399 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu1400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Atu1400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu1401 PF00005 ABC transporter Atu1401 PF08402 TOBE domain Atu1402 PF00528 Binding-protein-dependent transport system inner membrane component Atu1403 PF00528 Binding-protein-dependent transport system inner membrane component Atu1404 PF01547 Bacterial extracellular solute-binding protein Atu1406 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu1406 PF13378 Enolase C-terminal domain-like Atu1408 PF00107 Zinc-binding dehydrogenase Atu1408 PF08240 Alcohol dehydrogenase GroES-like domain Atu1409 PF04115 Ureidoglycolate lyase Atu1410 PF00005 ABC transporter Atu1411 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu1411 PF00005 ABC transporter Atu1413 PF13458 Periplasmic binding protein Atu1414 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu1414 PF02770 Acyl-CoA dehydrogenase, middle domain Atu1414 PF12806 Acetyl-CoA dehydrogenase C-terminal like Atu1414 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu1415 PF00106 short chain dehydrogenase Atu1416 PF00550 Phosphopantetheine attachment site Atu1416 PF07993 Male sterility protein Atu1416 PF00501 AMP-binding enzyme Atu1417 PF00378 Enoyl-CoA hydratase/isomerase Atu1419 PF07729 FCD domain Atu1419 PF00392 Bacterial regulatory proteins, gntR family Atu1420 PF01571 Aminomethyltransferase folate-binding domain Atu1424 PF00793 DAHP synthetase I family Atu1426 PF00113 Enolase, C-terminal TIM barrel domain Atu1426 PF03952 Enolase, N-terminal domain Atu1429 PF00676 Dehydrogenase E1 component Atu1430 PF02779 Transketolase, pyrimidine binding domain Atu1430 PF00364 Biotin-requiring enzyme Atu1430 PF02780 Transketolase, C-terminal domain Atu1432 PF02817 e3 binding domain Atu1432 PF00364 Biotin-requiring enzyme Atu1432 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Atu1434 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu1434 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atu1436 PF04055 Radical SAM superfamily Atu1436 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Atu1437 PF00892 EamA-like transporter family Atu1441 PF03364 Polyketide cyclase / dehydrase and lipid transport Atu1442 PF02464 Competence-damaged protein Atu1443 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Atu1443 PF02542 YgbB family Atu1444 PF01207 Dihydrouridine synthase (Dus) Atu1445 PF00989 PAS fold Atu1445 PF00512 His Kinase A (phospho-acceptor) domain Atu1445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1446 PF00158 Sigma-54 interaction domain Atu1446 PF00072 Response regulator receiver domain Atu1446 PF02954 Bacterial regulatory protein, Fis family Atu1447 PF00989 PAS fold Atu1447 PF00672 HAMP domain Atu1447 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1447 PF00512 His Kinase A (phospho-acceptor) domain Atu1448 PF02954 Bacterial regulatory protein, Fis family Atu1448 PF00158 Sigma-54 interaction domain Atu1448 PF00072 Response regulator receiver domain Atu1449 PF02254 TrkA-N domain Atu1449 PF02080 TrkA-C domain Atu1450 PF17209 Hfq protein Atu1451 PF01926 50S ribosome-binding GTPase Atu1451 PF13167 GTP-binding GTPase N-terminal Atu1451 PF16360 GTP-binding GTPase Middle Region Atu1452 PF03819 MazG nucleotide pyrophosphohydrolase domain Atu1454 PF14824 Sirohaem biosynthesis protein central Atu1454 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu1454 PF10414 Sirohaem synthase dimerisation region Atu1457 PF01795 MraW methylase family Atu1458 PF00175 Oxidoreductase NAD-binding domain Atu1458 PF00970 Oxidoreductase FAD-binding domain Atu1459 PF07690 Major Facilitator Superfamily Atu1462 PF02347 Glycine cleavage system P-protein Atu1463 PF01597 Glycine cleavage H-protein Atu1464 PF08669 Glycine cleavage T-protein C-terminal barrel domain Atu1464 PF01571 Aminomethyltransferase folate-binding domain Atu1470 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Atu1471 PF01479 S4 domain Atu1471 PF00849 RNA pseudouridylate synthase Atu1472 PF13419 Haloacid dehalogenase-like hydrolase Atu1475 PF01042 Endoribonuclease L-PSP Atu1476 PF00756 Putative esterase Atu1478 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 Atu1480 PF00578 AhpC/TSA family Atu1480 PF10417 C-terminal domain of 1-Cys peroxiredoxin Atu1485 PF08281 Sigma-70, region 4 Atu1485 PF04542 Sigma-70 region 2 Atu1488 PF13936 Helix-turn-helix domain Atu1488 PF00665 Integrase core domain Atu1489 PF03358 NADPH-dependent FMN reductase Atu1490 PF03960 ArsC family Atu1491 PF01758 Sodium Bile acid symporter family Atu1493 PF00654 Voltage gated chloride channel Atu1494 PF03099 Biotin/lipoate A/B protein ligase family Atu1494 PF12706 Beta-lactamase superfamily domain Atu1495 PF01026 TatD related DNase Atu1496 PF08264 Anticodon-binding domain of tRNA Atu1496 PF09334 tRNA synthetases class I (M) Atu1497 PF09115 DNA polymerase III, delta subunit, C terminal Atu1498 PF02223 Thymidylate kinase Atu1499 PF07943 Penicillin-binding protein 5, C-terminal domain Atu1499 PF00768 D-alanyl-D-alanine carboxypeptidase Atu1500 PF03330 Lytic transglycolase Atu1500 PF05036 Sporulation related domain Atu1507 PF03989 DNA gyrase C-terminal domain, beta-propeller Atu1507 PF00521 DNA gyrase/topoisomerase IV, subunit A Atu1508 PF01914 MarC family integral membrane protein Atu1509 PF00571 CBS domain Atu1509 PF01743 Poly A polymerase head domain Atu1511 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH Atu1512 PF00436 Single-strand binding protein family Atu1513 PF17760 UvrA interaction domain Atu1513 PF17755 UvrA DNA-binding domain Atu1515 PF01207 Dihydrouridine synthase (Dus) Atu1516 PF01557 Fumarylacetoacetate (FAA) hydrolase family Atu1517 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1519 PF00950 ABC 3 transport family Atu1520 PF00005 ABC transporter Atu1521 PF01297 Zinc-uptake complex component A periplasmic Atu1522 PF00356 Bacterial regulatory proteins, lacI family Atu1524 PF00248 Aldo/keto reductase family Atu1526 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Atu1526 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Atu1527 PF03597 Cytochrome oxidase maturation protein cbb3-type Atu1529 PF05751 FixH Atu1530 PF13746 4Fe-4S dicluster domain Atu1530 PF12801 4Fe-4S binding domain Atu1530 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Atu1534 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Atu1534 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Atu1537 PF00115 Cytochrome C and Quinol oxidase polypeptide I Atu1539 PF00916 Sulfate permease family Atu1539 PF01740 STAS domain Atu1541 PF00924 Mechanosensitive ion channel Atu1542 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Atu1546 PF00376 MerR family regulatory protein Atu1546 PF09278 MerR, DNA binding Atu1547 PF01769 Divalent cation transporter Atu1547 PF00571 CBS domain Atu1547 PF03448 MgtE intracellular N domain Atu1548 PF00384 Molybdopterin oxidoreductase Atu1550 PF01327 Polypeptide deformylase Atu1556 PF03099 Biotin/lipoate A/B protein ligase family Atu1557 PF08240 Alcohol dehydrogenase GroES-like domain Atu1557 PF00107 Zinc-binding dehydrogenase Atu1562 PF07549 SecD/SecF GG Motif Atu1562 PF02355 Protein export membrane protein Atu1563 PF02699 Preprotein translocase subunit Atu1567 PF08240 Alcohol dehydrogenase GroES-like domain Atu1567 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Atu1568 PF00440 Bacterial regulatory proteins, tetR family Atu1569 PF00067 Cytochrome P450 Atu1571 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1571 PF06426 Serine acetyltransferase, N-terminal Atu1572 PF00561 alpha/beta hydrolase fold Atu1574 PF01494 FAD binding domain Atu1575 PF01053 Cys/Met metabolism PLP-dependent enzyme Atu1577 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu1578 PF00528 Binding-protein-dependent transport system inner membrane component Atu1579 PF00528 Binding-protein-dependent transport system inner membrane component Atu1580 PF00005 ABC transporter Atu1586 PF17768 RecJ OB domain Atu1586 PF02272 DHHA1 domain Atu1586 PF01368 DHH family Atu1588 PF00742 Homoserine dehydrogenase Atu1588 PF03447 Homoserine dehydrogenase, NAD binding domain Atu1588 PF01842 ACT domain Atu1589 PF00155 Aminotransferase class I and II Atu1590 PF01156 Inosine-uridine preferring nucleoside hydrolase Atu1591 PF01925 Sulfite exporter TauE/SafE Atu1595 PF08240 Alcohol dehydrogenase GroES-like domain Atu1595 PF00107 Zinc-binding dehydrogenase Atu1596 PF02801 Beta-ketoacyl synthase, C-terminal domain Atu1596 PF00109 Beta-ketoacyl synthase, N-terminal domain Atu1599 PF07977 FabA-like domain Atu1600 PF00550 Phosphopantetheine attachment site Atu1601 PF04055 Radical SAM superfamily Atu1602 PF13545 Crp-like helix-turn-helix domain Atu1602 PF00027 Cyclic nucleotide-binding domain Atu1604 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Atu1605 PF17746 SfsA N-terminal OB domain Atu1605 PF03749 Sugar fermentation stimulation protein RE domain Atu1606 PF00557 Metallopeptidase family M24 Atu1607 PF04002 RadC-like JAB domain Atu1610 PF01474 Class-II DAHP synthetase family Atu1611 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu1611 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atu1613 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Atu1614 PF13419 Haloacid dehalogenase-like hydrolase Atu1616 PF00206 Lyase Atu1616 PF10415 Fumarase C C-terminus Atu1618 PF06418 CTP synthase N-terminus Atu1618 PF00117 Glutamine amidotransferase class-I Atu1619 PF03840 Preprotein translocase SecG subunit Atu1620 PF00121 Triosephosphate isomerase Atu1622 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1622 PF00204 DNA gyrase B Atu1622 PF00986 DNA gyrase B subunit, carboxyl terminus Atu1622 PF01751 Toprim domain Atu1623 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu1624 PF00440 Bacterial regulatory proteins, tetR family Atu1624 PF16859 Tetracyclin repressor-like, C-terminal domain Atu1625 PF01209 ubiE/COQ5 methyltransferase family Atu1627 PF00574 Clp protease Atu1629 PF01022 Bacterial regulatory protein, arsR family Atu1630 PF13091 PLD-like domain Atu1631 PF00072 Response regulator receiver domain Atu1632 PF08669 Glycine cleavage T-protein C-terminal barrel domain Atu1632 PF01571 Aminomethyltransferase folate-binding domain Atu1632 PF16350 FAD dependent oxidoreductase central domain Atu1632 PF01266 FAD dependent oxidoreductase Atu1633 PF00924 Mechanosensitive ion channel Atu1633 PF12795 Mechanosensitive ion channel porin domain Atu1633 PF12794 Mechanosensitive ion channel inner membrane domain 1 Atu1646 PF00005 ABC transporter Atu1647 PF02405 Permease MlaE Atu1648 PF13378 Enolase C-terminal domain-like Atu1648 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu1652 PF00390 Malic enzyme, N-terminal domain Atu1652 PF01515 Phosphate acetyl/butaryl transferase Atu1652 PF03949 Malic enzyme, NAD binding domain Atu1654 PF00881 Nitroreductase family Atu1656 PF07676 WD40-like Beta Propeller Repeat Atu1657 PF02540 NAD synthase Atu1657 PF00795 Carbon-nitrogen hydrolase Atu1658 PF00884 Sulfatase Atu1661 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atu1661 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu1664 PF05697 Bacterial trigger factor protein (TF) Atu1664 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Atu1664 PF05698 Bacterial trigger factor protein (TF) C-terminus Atu1669 PF01134 Glucose inhibited division protein A Atu1670 PF00107 Zinc-binding dehydrogenase Atu1670 PF08240 Alcohol dehydrogenase GroES-like domain Atu1672 PF00975 Thioesterase domain Atu1672 PF00501 AMP-binding enzyme Atu1672 PF00668 Condensation domain Atu1672 PF13193 AMP-binding enzyme C-terminal domain Atu1672 PF00550 Phosphopantetheine attachment site Atu1673 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Atu1673 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Atu1676 PF00425 chorismate binding enzyme Atu1676 PF04715 Anthranilate synthase component I, N terminal region Atu1677 PF01702 Queuine tRNA-ribosyltransferase Atu1678 PF02547 Queuosine biosynthesis protein Atu1679 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Atu1680 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Atu1681 PF01467 Cytidylyltransferase-like Atu1687 PF02885 Glycosyl transferase family, helical bundle domain Atu1687 PF00591 Glycosyl transferase family, a/b domain Atu1688 PF00218 Indole-3-glycerol phosphate synthase Atu1689 PF01967 MoaC family Atu1690 PF03453 MoeA N-terminal region (domain I and II) Atu1690 PF03454 MoeA C-terminal region (domain IV) Atu1690 PF00994 Probable molybdopterin binding domain Atu1691 PF17158 Membrane-associated sensor, integral membrane domain Atu1691 PF00990 Diguanylate cyclase, GGDEF domain Atu1693 PF02254 TrkA-N domain Atu1693 PF00999 Sodium/hydrogen exchanger family Atu1695 PF04055 Radical SAM superfamily Atu1695 PF06463 Molybdenum Cofactor Synthesis C Atu1696 PF00892 EamA-like transporter family Atu1697 PF07690 Major Facilitator Superfamily Atu1698 PF12804 MobA-like NTP transferase domain Atu1699 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Atu1700 PF01551 Peptidase family M23 Atu1702 PF01975 Survival protein SurE Atu1703 PF02403 Seryl-tRNA synthetase N-terminal domain Atu1703 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Atu1704 PF00902 Sec-independent protein translocase protein (TatC) Atu1705 PF02416 mttA/Hcf106 family Atu1706 PF02416 mttA/Hcf106 family Atu1707 PF04079 Segregation and condensation complex subunit ScpB Atu1708 PF02616 Segregation and condensation protein ScpA Atu1709 PF00933 Glycosyl hydrolase family 3 N terminal domain Atu1711 PF00750 tRNA synthetases class I (R) Atu1711 PF05746 DALR anticodon binding domain Atu1711 PF03485 Arginyl tRNA synthetase N terminal domain Atu1712 PF13286 Phosphohydrolase-associated domain Atu1712 PF01966 HD domain Atu1713 PF01521 Iron-sulphur cluster biosynthesis Atu1715 PF08238 Sel1 repeat Atu1719 PF10458 Valyl tRNA synthetase tRNA binding arm Atu1719 PF00133 tRNA synthetases class I (I, L, M and V) Atu1719 PF08264 Anticodon-binding domain of tRNA Atu1728 PF03358 NADPH-dependent FMN reductase Atu1729 PF00994 Probable molybdopterin binding domain Atu1729 PF18146 Damage-inducible protein CinA KH domain Atu1729 PF02464 Competence-damaged protein Atu1730 PF00582 Universal stress protein family Atu1731 PF00156 Phosphoribosyl transferase domain Atu1733 PF08471 Class II vitamin B12-dependent ribonucleotide reductase Atu1733 PF02867 Ribonucleotide reductase, barrel domain Atu1736 PF01566 Natural resistance-associated macrophage protein Atu1738 PF00664 ABC transporter transmembrane region Atu1738 PF00005 ABC transporter Atu1739 PF01594 AI-2E family transporter Atu1740 PF00583 Acetyltransferase (GNAT) family Atu1743 PF01613 Flavin reductase like domain Atu1746 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Atu1746 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Atu1746 PF03129 Anticodon binding domain Atu1746 PF02824 TGS domain Atu1747 PF01809 Putative membrane protein insertion efficiency factor Atu1749 PF01227 GTP cyclohydrolase I Atu1750 PF01502 Phosphoribosyl-AMP cyclohydrolase Atu1751 PF01734 Patatin-like phospholipase Atu1752 PF00478 IMP dehydrogenase / GMP reductase domain Atu1752 PF00571 CBS domain Atu1759 PF03313 Serine dehydratase alpha chain Atu1759 PF03315 Serine dehydratase beta chain Atu1765 PF03466 LysR substrate binding domain Atu1765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu1767 PF01965 DJ-1/PfpI family Atu1767 PF12833 Helix-turn-helix domain Atu1768 PF03853 YjeF-related protein N-terminus Atu1768 PF01256 Carbohydrate kinase Atu1769 PF00543 Nitrogen regulatory protein P-II Atu1770 PF00120 Glutamine synthetase, catalytic domain Atu1770 PF03951 Glutamine synthetase, beta-Grasp domain Atu1774 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu1776 PF00892 EamA-like transporter family Atu1778 PF00271 Helicase conserved C-terminal domain Atu1778 PF00270 DEAD/DEAH box helicase Atu1778 PF03461 TRCF domain Atu1778 PF17757 UvrB interaction domain Atu1778 PF02559 CarD-like/TRCF domain Atu1780 PF00271 Helicase conserved C-terminal domain Atu1780 PF17191 RecG wedge domain Atu1780 PF00270 DEAD/DEAH box helicase Atu1782 PF05016 ParE toxin of type II toxin-antitoxin system, parDE Atu1783 PF01402 Ribbon-helix-helix protein, copG family Atu1786 PF01380 SIS domain Atu1787 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1787 PF14602 Hexapeptide repeat of succinyl-transferase Atu1787 PF12804 MobA-like NTP transferase domain Atu1788 PF00392 Bacterial regulatory proteins, gntR family Atu1788 PF07729 FCD domain Atu1789 PF02608 ABC transporter substrate-binding protein PnrA-like Atu1790 PF02653 Branched-chain amino acid transport system / permease component Atu1791 PF02653 Branched-chain amino acid transport system / permease component Atu1792 PF00005 ABC transporter Atu1794 PF01494 FAD binding domain Atu1795 PF03547 Membrane transport protein Atu1796 PF02683 Cytochrome C biogenesis protein transmembrane region Atu1803 PF00313 'Cold-shock' DNA-binding domain Atu1814 PF00561 alpha/beta hydrolase fold Atu1816 PF12704 MacB-like periplasmic core domain Atu1816 PF02687 FtsX-like permease family Atu1816 PF00005 ABC transporter Atu1817 PF12704 MacB-like periplasmic core domain Atu1817 PF00005 ABC transporter Atu1817 PF02687 FtsX-like permease family Atu1819 PF01521 Iron-sulphur cluster biosynthesis Atu1820 PF01883 Iron-sulfur cluster assembly protein Atu1821 PF00266 Aminotransferase class-V Atu1822 PF01458 Uncharacterized protein family (UPF0051) Atu1823 PF00005 ABC transporter Atu1824 PF01458 Uncharacterized protein family (UPF0051) Atu1825 PF00266 Aminotransferase class-V Atu1826 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Atu1827 PF03702 Anhydro-N-acetylmuramic acid kinase Atu1828 PF00579 tRNA synthetases class I (W and Y) Atu1830 PF00578 AhpC/TSA family Atu1831 PF04305 Protein of unknown function (DUF455) Atu1832 PF01476 LysM domain Atu1832 PF08525 Opacity-associated protein A N-terminal motif Atu1832 PF01551 Peptidase family M23 Atu1833 PF00270 DEAD/DEAH box helicase Atu1833 PF00271 Helicase conserved C-terminal domain Atu1839 PF00834 Ribulose-phosphate 3 epimerase family Atu1841 PF00206 Lyase Atu1841 PF10397 Adenylosuccinate lyase C-terminus Atu1843 PF01259 SAICAR synthetase Atu1844 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Atu1848 PF00155 Aminotransferase class I and II Atu1848 PF00392 Bacterial regulatory proteins, gntR family Atu1850 PF02769 AIR synthase related protein, C-terminal domain Atu1850 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Atu1850 PF00586 AIR synthase related protein, N-terminal domain Atu1854 PF00462 Glutaredoxin Atu1855 PF07690 Major Facilitator Superfamily Atu1856 PF00459 Inositol monophosphatase family Atu1857 PF00459 Inositol monophosphatase family Atu1858 PF01171 PP-loop family Atu1859 PF04960 Glutaminase Atu1860 PF00163 Ribosomal protein S4/S9 N-terminal domain Atu1860 PF01479 S4 domain Atu1861 PF03741 Integral membrane protein TerC family Atu1863 PF00892 EamA-like transporter family Atu1864 PF01810 LysE type translocator Atu1867 PF01177 Asp/Glu/Hydantoin racemase Atu1868 PF00588 SpoU rRNA Methylase family Atu1870 PF00180 Isocitrate/isopropylmalate dehydrogenase Atu1873 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Atu1873 PF01411 tRNA synthetases class II (A) Atu1873 PF02272 DHHA1 domain Atu1874 PF00154 recA bacterial DNA recombination protein Atu1875 PF00294 pfkB family carbohydrate kinase Atu1876 PF04227 Indigoidine synthase A like protein Atu1877 PF01389 OmpA-like transmembrane domain Atu1877 PF00691 OmpA family Atu1879 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu1880 PF00528 Binding-protein-dependent transport system inner membrane component Atu1881 PF00528 Binding-protein-dependent transport system inner membrane component Atu1882 PF06233 Usg-like family Atu1883 PF08241 Methyltransferase domain Atu1884 PF09084 NMT1/THI5 like Atu1885 PF01037 Lrp/AsnC ligand binding domain Atu1885 PF13404 AsnC-type helix-turn-helix domain Atu1886 PF03167 Uracil DNA glycosylase superfamily Atu1888 PF00512 His Kinase A (phospho-acceptor) domain Atu1888 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1888 PF00989 PAS fold Atu1889 PF01219 Prokaryotic diacylglycerol kinase Atu1890 PF02277 Phosphoribosyltransferase Atu1891 PF02654 Cobalamin-5-phosphate synthase Atu1895 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Atu1898 PF00005 ABC transporter Atu1899 PF13407 Periplasmic binding protein domain Atu1900 PF02653 Branched-chain amino acid transport system / permease component Atu1901 PF00456 Transketolase, thiamine diphosphate binding domain Atu1902 PF02780 Transketolase, C-terminal domain Atu1902 PF02779 Transketolase, pyrimidine binding domain Atu1903 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Atu1903 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Atu1904 PF04198 Putative sugar-binding domain Atu1905 PF00106 short chain dehydrogenase Atu1906 PF01061 ABC-2 type transporter Atu1907 PF00005 ABC transporter Atu1912 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu1912 PF08269 Cache domain Atu1914 PF12002 MgsA AAA+ ATPase C terminal Atu1914 PF00004 ATPase family associated with various cellular activities (AAA) Atu1914 PF16193 AAA C-terminal domain Atu1915 PF00595 PDZ domain Atu1915 PF13180 PDZ domain Atu1918 PF00920 Dehydratase family Atu1919 PF00174 Oxidoreductase molybdopterin binding domain Atu1920 PF01794 Ferric reductase like transmembrane component Atu1921 PF05675 Protein of unknown function (DUF817) Atu1922 PF01196 Ribosomal protein L17 Atu1923 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Atu1923 PF01000 RNA polymerase Rpb3/RpoA insert domain Atu1923 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Atu1924 PF00411 Ribosomal protein S11 Atu1925 PF00416 Ribosomal protein S13/S18 Atu1927 PF00344 SecY translocase Atu1928 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Atu1929 PF00333 Ribosomal protein S5, N-terminal domain Atu1929 PF03719 Ribosomal protein S5, C-terminal domain Atu1930 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Atu1931 PF00347 Ribosomal protein L6 Atu1932 PF00410 Ribosomal protein S8 Atu1933 PF00253 Ribosomal protein S14p/S29e Atu1934 PF00281 Ribosomal protein L5 Atu1934 PF00673 ribosomal L5P family C-terminus Atu1935 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Atu1935 PF00467 KOW motif Atu1936 PF00238 Ribosomal protein L14p/L23e Atu1937 PF00366 Ribosomal protein S17 Atu1938 PF00831 Ribosomal L29 protein Atu1939 PF00252 Ribosomal protein L16p/L10e Atu1940 PF00189 Ribosomal protein S3, C-terminal domain Atu1940 PF07650 KH domain Atu1941 PF00237 Ribosomal protein L22p/L17e Atu1942 PF00203 Ribosomal protein S19 Atu1943 PF00181 Ribosomal Proteins L2, RNA binding domain Atu1943 PF03947 Ribosomal Proteins L2, C-terminal domain Atu1944 PF00276 Ribosomal protein L23 Atu1945 PF00573 Ribosomal protein L4/L1 family Atu1946 PF00297 Ribosomal protein L3 Atu1947 PF00338 Ribosomal protein S10p/S20e Atu1948 PF00009 Elongation factor Tu GTP binding domain Atu1948 PF03144 Elongation factor Tu domain 2 Atu1948 PF03143 Elongation factor Tu C-terminal domain Atu1949 PF14492 Elongation Factor G, domain II Atu1949 PF00679 Elongation factor G C-terminus Atu1949 PF00009 Elongation factor Tu GTP binding domain Atu1949 PF03764 Elongation factor G, domain IV Atu1949 PF03144 Elongation factor Tu domain 2 Atu1950 PF00177 Ribosomal protein S7p/S5e Atu1951 PF00164 Ribosomal protein S12/S23 Atu1955 PF04998 RNA polymerase Rpb1, domain 5 Atu1955 PF05000 RNA polymerase Rpb1, domain 4 Atu1955 PF00623 RNA polymerase Rpb1, domain 2 Atu1955 PF04997 RNA polymerase Rpb1, domain 1 Atu1955 PF04983 RNA polymerase Rpb1, domain 3 Atu1956 PF00562 RNA polymerase Rpb2, domain 6 Atu1956 PF04560 RNA polymerase Rpb2, domain 7 Atu1956 PF04565 RNA polymerase Rpb2, domain 3 Atu1956 PF04561 RNA polymerase Rpb2, domain 2 Atu1956 PF10385 RNA polymerase beta subunit external 1 domain Atu1956 PF04563 RNA polymerase beta subunit Atu1957 PF16320 Ribosomal protein L7/L12 dimerisation domain Atu1957 PF00542 Ribosomal protein L7/L12 C-terminal domain Atu1958 PF00466 Ribosomal protein L10 Atu1959 PF00687 Ribosomal protein L1p/L10e family Atu1960 PF03946 Ribosomal protein L11, N-terminal domain Atu1960 PF00298 Ribosomal protein L11, RNA binding domain Atu1961 PF00467 KOW motif Atu1961 PF02357 Transcription termination factor nusG Atu1962 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Atu1965 PF02719 Polysaccharide biosynthesis protein Atu1965 PF08485 Polysaccharide biosynthesis protein C-terminal Atu1966 PF00009 Elongation factor Tu GTP binding domain Atu1966 PF03144 Elongation factor Tu domain 2 Atu1966 PF03143 Elongation factor Tu C-terminal domain Atu1967 PF03741 Integral membrane protein TerC family Atu1969 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme Atu1977 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Atu1977 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu1982 PF04545 Sigma-70, region 4 Atu1982 PF04542 Sigma-70 region 2 Atu1984 PF00158 Sigma-54 interaction domain Atu1984 PF02954 Bacterial regulatory protein, Fis family Atu1984 PF00072 Response regulator receiver domain Atu1985 PF08769 Sporulation initiation factor Spo0A C terminal Atu1985 PF00072 Response regulator receiver domain Atu1986 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1986 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu1986 PF01627 Hpt domain Atu1986 PF00512 His Kinase A (phospho-acceptor) domain Atu1986 PF00072 Response regulator receiver domain Atu1987 PF00072 Response regulator receiver domain Atu1988 PF13426 PAS domain Atu1988 PF08447 PAS fold Atu1988 PF07536 HWE histidine kinase Atu1989 PF00072 Response regulator receiver domain Atu1990 PF00512 His Kinase A (phospho-acceptor) domain Atu1990 PF08446 PAS fold Atu1990 PF00360 Phytochrome region Atu1990 PF01590 GAF domain Atu1990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1993 PF08032 RNA 2'-O ribose methyltransferase substrate binding Atu1993 PF00588 SpoU rRNA Methylase family Atu1994 PF03061 Thioesterase superfamily Atu1999 PF13460 NAD(P)H-binding Atu2000 PF01638 HxlR-like helix-turn-helix Atu2001 PF04851 Type III restriction enzyme, res subunit Atu2001 PF00271 Helicase conserved C-terminal domain Atu2001 PF12344 Ultra-violet resistance protein B Atu2001 PF17757 UvrB interaction domain Atu2001 PF02151 UvrB/uvrC motif Atu2002 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Atu2002 PF00756 Putative esterase Atu2006 PF00684 DnaJ central domain Atu2006 PF01556 DnaJ C terminal domain Atu2006 PF00226 DnaJ domain Atu2010 PF00990 Diguanylate cyclase, GGDEF domain Atu2010 PF17151 Periplasmic sensor domain Atu2012 PF00005 ABC transporter Atu2012 PF08402 TOBE domain Atu2014 PF01547 Bacterial extracellular solute-binding protein Atu2015 PF00155 Aminotransferase class I and II Atu2016 PF05025 RbsD / FucU transport protein family Atu2017 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system Atu2019 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Atu2019 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Atu2021 PF12833 Helix-turn-helix domain Atu2021 PF06719 AraC-type transcriptional regulator N-terminus Atu2022 PF00107 Zinc-binding dehydrogenase Atu2022 PF08240 Alcohol dehydrogenase GroES-like domain Atu2023 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu2024 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Atu2025 PF03472 Autoinducer binding domain Atu2025 PF00196 Bacterial regulatory proteins, luxR family Atu2026 PF13538 UvrD-like helicase C-terminal domain Atu2026 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain Atu2026 PF14490 Helix-hairpin-helix containing domain Atu2030 PF04542 Sigma-70 region 2 Atu2030 PF08281 Sigma-70, region 4 Atu2032 PF00248 Aldo/keto reductase family Atu2035 PF10369 Small subunit of acetolactate synthase Atu2036 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Atu2036 PF00205 Thiamine pyrophosphate enzyme, central domain Atu2036 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Atu2041 PF13302 Acetyltransferase (GNAT) domain Atu2043 PF13180 PDZ domain Atu2044 PF01145 SPFH domain / Band 7 family Atu2045 PF01145 SPFH domain / Band 7 family Atu2046 PF00186 Dihydrofolate reductase Atu2047 PF00303 Thymidylate synthase Atu2053 PF02913 FAD linked oxidases, C-terminal domain Atu2053 PF01565 FAD binding domain Atu2054 PF00873 AcrB/AcrD/AcrF family Atu2055 PF13533 Biotin-lipoyl like Atu2057 PF00580 UvrD/REP helicase N-terminal domain Atu2057 PF13361 UvrD-like helicase C-terminal domain Atu2059 PF00440 Bacterial regulatory proteins, tetR family Atu2059 PF13977 BetI-type transcriptional repressor, C-terminal Atu2060 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Atu2061 PF00561 alpha/beta hydrolase fold Atu2066 PF00857 Isochorismatase family Atu2070 PF01321 Creatinase/Prolidase N-terminal domain Atu2070 PF00557 Metallopeptidase family M24 Atu2073 PF02630 SCO1/SenC Atu2075 PF01584 CheW-like domain Atu2077 PF00929 Exonuclease Atu2078 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2078 PF03466 LysR substrate binding domain Atu2080 PF00583 Acetyltransferase (GNAT) family Atu2081 PF01636 Phosphotransferase enzyme family Atu2082 PF03120 NAD-dependent DNA ligase OB-fold domain Atu2082 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Atu2082 PF12826 Helix-hairpin-helix motif Atu2082 PF00533 BRCA1 C Terminus (BRCT) domain Atu2082 PF01653 NAD-dependent DNA ligase adenylation domain Atu2083 PF02463 RecF/RecN/SMC N terminal domain Atu2084 PF13525 Outer membrane lipoprotein Atu2085 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Atu2086 PF00091 Tubulin/FtsZ family, GTPase domain Atu2086 PF12327 FtsZ family, C-terminal domain Atu2087 PF02491 SHS2 domain inserted in FTSA Atu2088 PF08478 POTRA domain, FtsQ-type Atu2088 PF03799 Cell division protein FtsQ Atu2089 PF07478 D-ala D-ala ligase C-terminus Atu2089 PF01820 D-ala D-ala ligase N-terminus Atu2090 PF00083 Sugar (and other) transporter Atu2090 PF07690 Major Facilitator Superfamily Atu2091 PF00990 Diguanylate cyclase, GGDEF domain Atu2091 PF03707 Bacterial signalling protein N terminal repeat Atu2091 PF00563 EAL domain Atu2091 PF13188 PAS domain Atu2092 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Atu2092 PF01565 FAD binding domain Atu2093 PF02875 Mur ligase family, glutamate ligase domain Atu2093 PF01225 Mur ligase family, catalytic domain Atu2093 PF08245 Mur ligase middle domain Atu2094 PF03033 Glycosyltransferase family 28 N-terminal domain Atu2094 PF04101 Glycosyltransferase family 28 C-terminal domain Atu2095 PF01098 Cell cycle protein Atu2096 PF08245 Mur ligase middle domain Atu2096 PF02875 Mur ligase family, glutamate ligase domain Atu2097 PF00953 Glycosyl transferase family 4 Atu2097 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Atu2098 PF01225 Mur ligase family, catalytic domain Atu2098 PF08245 Mur ligase middle domain Atu2098 PF02875 Mur ligase family, glutamate ligase domain Atu2099 PF08245 Mur ligase middle domain Atu2099 PF01225 Mur ligase family, catalytic domain Atu2099 PF02875 Mur ligase family, glutamate ligase domain Atu2100 PF00905 Penicillin binding protein transpeptidase domain Atu2100 PF03717 Penicillin-binding Protein dimerisation domain Atu2102 PF01795 MraW methylase family Atu2103 PF02381 MraZ protein, putative antitoxin-like Atu2104 PF03994 Domain of Unknown Function (DUF350) Atu2106 PF03738 Glutathionylspermidine synthase preATP-grasp Atu2107 PF13333 Integrase core domain Atu2107 PF13276 HTH-like domain Atu2107 PF01527 Transposase Atu2107 PF00665 Integrase core domain Atu2108 PF03738 Glutathionylspermidine synthase preATP-grasp Atu2113 PF01510 N-acetylmuramoyl-L-alanine amidase Atu2114 PF00226 DnaJ domain Atu2114 PF05099 Tellurite resistance protein TerB Atu2115 PF00365 Phosphofructokinase Atu2120 PF13649 Methyltransferase domain Atu2121 PF01183 Glycosyl hydrolases family 25 Atu2123 PF02219 Methylenetetrahydrofolate reductase Atu2124 PF01209 ubiE/COQ5 methyltransferase family Atu2125 PF12848 ABC transporter Atu2125 PF00005 ABC transporter Atu2126 PF12146 Serine aminopeptidase, S33 Atu2127 PF02515 CoA-transferase family III Atu2128 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Atu2128 PF00205 Thiamine pyrophosphate enzyme, central domain Atu2128 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Atu2130 PF01042 Endoribonuclease L-PSP Atu2133 PF03734 L,D-transpeptidase catalytic domain Atu2133 PF01476 LysM domain Atu2134 PF07690 Major Facilitator Superfamily Atu2136 PF10609 NUBPL iron-transfer P-loop NTPase Atu2138 PF00465 Iron-containing alcohol dehydrogenase Atu2139 PF00171 Aldehyde dehydrogenase family Atu2142 PF00120 Glutamine synthetase, catalytic domain Atu2142 PF03951 Glutamine synthetase, beta-Grasp domain Atu2143 PF13520 Amino acid permease Atu2145 PF01380 SIS domain Atu2145 PF01418 Helix-turn-helix domain, rpiR family Atu2150 PF08402 TOBE domain Atu2150 PF00005 ABC transporter Atu2151 PF08240 Alcohol dehydrogenase GroES-like domain Atu2151 PF00107 Zinc-binding dehydrogenase Atu2154 PF07690 Major Facilitator Superfamily Atu2155 PF02574 Homocysteine S-methyltransferase Atu2155 PF00809 Pterin binding enzyme Atu2155 PF02607 B12 binding domain Atu2155 PF02965 Vitamin B12 dependent methionine synthase, activation domain Atu2155 PF02310 B12 binding domain Atu2159 PF13505 Outer membrane protein beta-barrel domain Atu2162 PF04402 Protein of unknown function (DUF541) Atu2164 PF01894 Uncharacterised protein family UPF0047 Atu2165 PF08446 PAS fold Atu2165 PF01590 GAF domain Atu2165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu2165 PF00360 Phytochrome region Atu2165 PF00512 His Kinase A (phospho-acceptor) domain Atu2167 PF04546 Sigma-70, non-essential region Atu2167 PF04545 Sigma-70, region 4 Atu2167 PF00140 Sigma-70 factor, region 1.2 Atu2167 PF04542 Sigma-70 region 2 Atu2167 PF03979 Sigma-70 factor, region 1.1 Atu2167 PF04539 Sigma-70 region 3 Atu2168 PF08275 DNA primase catalytic core, N-terminal domain Atu2168 PF01807 CHC2 zinc finger Atu2168 PF08278 DNA primase DnaG DnaB-binding Atu2168 PF10410 DnaB-helicase binding domain of primase Atu2170 PF00117 Glutamine amidotransferase class-I Atu2170 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Atu2171 PF00561 alpha/beta hydrolase fold Atu2172 PF01554 MatE Atu2173 PF02743 Cache domain Atu2173 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu2173 PF00672 HAMP domain Atu2175 PF04228 Putative neutral zinc metallopeptidase Atu2178 PF02142 MGS-like domain Atu2178 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atu2178 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Atu2179 PF00990 Diguanylate cyclase, GGDEF domain Atu2179 PF07694 5TMR of 5TMR-LYT Atu2182 PF01272 Transcription elongation factor, GreA/GreB, C-term Atu2182 PF03449 Transcription elongation factor, N-terminal Atu2183 PF00534 Glycosyl transferases group 1 Atu2184 PF01037 Lrp/AsnC ligand binding domain Atu2185 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu2186 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2186 PF03466 LysR substrate binding domain Atu2188 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Atu2191 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2191 PF03466 LysR substrate binding domain Atu2195 PF01699 Sodium/calcium exchanger protein Atu2196 PF00155 Aminotransferase class I and II Atu2197 PF00563 EAL domain Atu2197 PF05231 MASE1 Atu2200 PF00313 'Cold-shock' DNA-binding domain Atu2201 PF00753 Metallo-beta-lactamase superfamily Atu2205 PF12802 MarR family Atu2206 PF00486 Transcriptional regulatory protein, C terminal Atu2206 PF00072 Response regulator receiver domain Atu2207 PF16527 Two-component sensor protein CpxA, periplasmic domain Atu2207 PF00672 HAMP domain Atu2207 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu2207 PF00512 His Kinase A (phospho-acceptor) domain Atu2208 PF01588 Putative tRNA binding domain Atu2209 PF03807 NADP oxidoreductase coenzyme F420-dependent Atu2209 PF14748 Pyrroline-5-carboxylate reductase dimerisation Atu2213 PF01790 Prolipoprotein diacylglyceryl transferase Atu2215 PF02578 Multi-copper polyphenol oxidoreductase laccase Atu2218 PF14572 Phosphoribosyl synthetase-associated domain Atu2218 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Atu2220 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase Atu2222 PF00535 Glycosyl transferase family 2 Atu2223 PF00672 HAMP domain Atu2223 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu2224 PF00171 Aldehyde dehydrogenase family Atu2225 PF02954 Bacterial regulatory protein, Fis family Atu2226 PF03707 Bacterial signalling protein N terminal repeat Atu2226 PF00990 Diguanylate cyclase, GGDEF domain Atu2226 PF13188 PAS domain Atu2226 PF00563 EAL domain Atu2227 PF14693 Ribosomal protein TL5, C-terminal domain Atu2227 PF01386 Ribosomal L25p family Atu2228 PF00990 Diguanylate cyclase, GGDEF domain Atu2228 PF08447 PAS fold Atu2228 PF08448 PAS fold Atu2228 PF00563 EAL domain Atu2230 PF01195 Peptidyl-tRNA hydrolase Atu2232 PF02617 ATP-dependent Clp protease adaptor protein ClpS Atu2233 PF06071 Protein of unknown function (DUF933) Atu2233 PF01926 50S ribosome-binding GTPase Atu2236 PF00156 Phosphoribosyl transferase domain Atu2237 PF00033 Cytochrome b/b6/petB Atu2237 PF02167 Cytochrome C1 family Atu2237 PF00032 Cytochrome b(C-terminal)/b6/petD Atu2238 PF00032 Cytochrome b(C-terminal)/b6/petD Atu2238 PF00033 Cytochrome b/b6/petB Atu2239 PF00355 Rieske [2Fe-2S] domain Atu2239 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Atu2241 PF00664 ABC transporter transmembrane region Atu2241 PF00005 ABC transporter Atu2242 PF00664 ABC transporter transmembrane region Atu2242 PF00005 ABC transporter Atu2243 PF00149 Calcineurin-like phosphoesterase Atu2244 PF00588 SpoU rRNA Methylase family Atu2245 PF02690 Na+/Pi-cotransporter Atu2247 PF01218 Coproporphyrinogen III oxidase Atu2250 PF13735 tRNA nucleotidyltransferase domain 2 putative Atu2250 PF12627 Probable RNA and SrmB- binding site of polymerase A Atu2250 PF01743 Poly A polymerase head domain Atu2251 PF00293 NUDIX domain Atu2253 PF17863 AAA lid domain Atu2253 PF07726 ATPase family associated with various cellular activities (AAA) Atu2258 PF00583 Acetyltransferase (GNAT) family Atu2259 PF07690 Major Facilitator Superfamily Atu2261 PF13409 Glutathione S-transferase, N-terminal domain Atu2262 PF00293 NUDIX domain Atu2264 PF00682 HMGL-like Atu2264 PF08502 LeuA allosteric (dimerisation) domain Atu2265 PF03594 Benzoate membrane transport protein Atu2268 PF04542 Sigma-70 region 2 Atu2268 PF08281 Sigma-70, region 4 Atu2270 PF00574 Clp protease Atu2271 PF04955 HupE / UreJ protein Atu2273 PF14489 QueF-like protein Atu2274 PF01545 Cation efflux family Atu2274 PF16916 Dimerisation domain of Zinc Transporter Atu2276 PF13458 Periplasmic binding protein Atu2278 PF01022 Bacterial regulatory protein, arsR family Atu2279 PF00571 CBS domain Atu2279 PF00005 ABC transporter Atu2280 PF00528 Binding-protein-dependent transport system inner membrane component Atu2281 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Atu2282 PF00265 Thymidine kinase Atu2283 PF00127 Copper binding proteins, plastocyanin/azurin family Atu2285 PF00196 Bacterial regulatory proteins, luxR family Atu2285 PF03472 Autoinducer binding domain Atu2286 PF03350 Uncharacterized protein family, UPF0114 Atu2287 PF04886 PT repeat Atu2287 PF00593 TonB dependent receptor Atu2287 PF07715 TonB-dependent Receptor Plug Domain Atu2289 PF00117 Glutamine amidotransferase class-I Atu2289 PF04715 Anthranilate synthase component I, N terminal region Atu2289 PF00425 chorismate binding enzyme Atu2291 PF11871 Domain of unknown function (DUF3391) Atu2291 PF01966 HD domain Atu2292 PF13382 Adenine deaminase C-terminal domain Atu2292 PF01979 Amidohydrolase family Atu2294 PF00583 Acetyltransferase (GNAT) family Atu2295 PF00128 Alpha amylase, catalytic domain Atu2296 PF00294 pfkB family carbohydrate kinase Atu2300 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Atu2300 PF01926 50S ribosome-binding GTPase Atu2304 PF05992 SbmA/BacA-like family Atu2306 PF00557 Metallopeptidase family M24 Atu2309 PF00111 2Fe-2S iron-sulfur cluster binding domain Atu2309 PF01799 [2Fe-2S] binding domain Atu2310 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Atu2310 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Atu2312 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2312 PF03466 LysR substrate binding domain Atu2315 PF01979 Amidohydrolase family Atu2318 PF01070 FMN-dependent dehydrogenase Atu2319 PF00893 Small Multidrug Resistance protein Atu2320 PF00440 Bacterial regulatory proteins, tetR family Atu2320 PF17932 Tetracyclin repressor-like, C-terminal domain Atu2321 PF00768 D-alanyl-D-alanine carboxypeptidase Atu2321 PF07943 Penicillin-binding protein 5, C-terminal domain Atu2323 PF00576 HIUase/Transthyretin family Atu2324 PF04115 Ureidoglycolate lyase Atu2327 PF09349 OHCU decarboxylase Atu2327 PF01014 Uricase Atu2329 PF06299 Protein of unknown function (DUF1045) Atu2331 PF01266 FAD dependent oxidoreductase Atu2331 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Atu2332 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Atu2332 PF01627 Hpt domain Atu2332 PF00512 His Kinase A (phospho-acceptor) domain Atu2332 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu2332 PF00672 HAMP domain Atu2332 PF00072 Response regulator receiver domain Atu2333 PF00271 Helicase conserved C-terminal domain Atu2333 PF00270 DEAD/DEAH box helicase Atu2334 PF00892 EamA-like transporter family Atu2335 PF07681 DoxX Atu2336 PF01476 LysM domain Atu2336 PF03734 L,D-transpeptidase catalytic domain Atu2338 PF14403 Circularly permuted ATP-grasp type 2 Atu2340 PF01841 Transglutaminase-like superfamily Atu2340 PF08379 Bacterial transglutaminase-like N-terminal region Atu2343 PF00583 Acetyltransferase (GNAT) family Atu2346 PF02653 Branched-chain amino acid transport system / permease component Atu2347 PF00005 ABC transporter Atu2348 PF13407 Periplasmic binding protein domain Atu2350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2350 PF03466 LysR substrate binding domain Atu2358 PF01757 Acyltransferase family Atu2360 PF00672 HAMP domain Atu2360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu2361 PF07690 Major Facilitator Superfamily Atu2362 PF02965 Vitamin B12 dependent methionine synthase, activation domain Atu2362 PF02310 B12 binding domain Atu2362 PF00809 Pterin binding enzyme Atu2362 PF02574 Homocysteine S-methyltransferase Atu2362 PF02607 B12 binding domain Atu2363 PF00528 Binding-protein-dependent transport system inner membrane component Atu2364 PF00528 Binding-protein-dependent transport system inner membrane component Atu2365 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu2366 PF00005 ABC transporter Atu2371 PF00331 Glycosyl hydrolase family 10 Atu2372 PF00535 Glycosyl transferase family 2 Atu2375 PF03808 Glycosyl transferase WecB/TagA/CpsF family Atu2379 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Atu2379 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Atu2379 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Atu2379 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Atu2380 PF01152 Bacterial-like globin Atu2384 PF08362 YcdC-like protein, C-terminal region Atu2384 PF00440 Bacterial regulatory proteins, tetR family Atu2385 PF01546 Peptidase family M20/M25/M40 Atu2385 PF07687 Peptidase dimerisation domain Atu2386 PF01979 Amidohydrolase family Atu2387 PF00293 NUDIX domain Atu2388 PF00005 ABC transporter Atu2389 PF00528 Binding-protein-dependent transport system inner membrane component Atu2390 PF00528 Binding-protein-dependent transport system inner membrane component Atu2393 PF00873 AcrB/AcrD/AcrF family Atu2395 PF12706 Beta-lactamase superfamily domain Atu2395 PF00753 Metallo-beta-lactamase superfamily Atu2396 PF02492 CobW/HypB/UreG, nucleotide-binding domain Atu2397 PF01730 UreF Atu2398 PF02814 UreE urease accessory protein, N-terminal domain Atu2398 PF05194 UreE urease accessory protein, C-terminal domain Atu2399 PF08534 Redoxin Atu2401 PF01979 Amidohydrolase family Atu2401 PF00449 Urease alpha-subunit, N-terminal domain Atu2403 PF07007 Lysozyme inhibitor LprI Atu2405 PF00699 Urease beta subunit Atu2406 PF06906 Protein of unknown function (DUF1272) Atu2407 PF00547 Urease, gamma subunit Atu2408 PF01774 UreD urease accessory protein Atu2410 PF00005 ABC transporter Atu2411 PF00005 ABC transporter Atu2411 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu2413 PF02653 Branched-chain amino acid transport system / permease component Atu2415 PF10931 Protein of unknown function (DUF2735) Atu2416 PF00120 Glutamine synthetase, catalytic domain Atu2416 PF03951 Glutamine synthetase, beta-Grasp domain Atu2417 PF00106 short chain dehydrogenase Atu2418 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu2418 PF00512 His Kinase A (phospho-acceptor) domain Atu2418 PF00072 Response regulator receiver domain Atu2418 PF00989 PAS fold Atu2418 PF01627 Hpt domain Atu2418 PF18415 Histidine kinase receptor ArcB trans-membrane domain Atu2419 PF00072 Response regulator receiver domain Atu2421 PF01522 Polysaccharide deacetylase Atu2422 PF13458 Periplasmic binding protein Atu2424 PF00005 ABC transporter Atu2425 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu2425 PF00005 ABC transporter Atu2426 PF02653 Branched-chain amino acid transport system / permease component Atu2426 PF11862 Domain of unknown function (DUF3382) Atu2427 PF02653 Branched-chain amino acid transport system / permease component Atu2428 PF00459 Inositol monophosphatase family Atu2434 PF00486 Transcriptional regulatory protein, C terminal Atu2434 PF00072 Response regulator receiver domain Atu2438 PF10090 Histidine phosphotransferase C-terminal domain Atu2441 PF00588 SpoU rRNA Methylase family Atu2443 PF00849 RNA pseudouridylate synthase Atu2445 PF04542 Sigma-70 region 2 Atu2445 PF04545 Sigma-70, region 4 Atu2445 PF00140 Sigma-70 factor, region 1.2 Atu2447 PF00709 Adenylosuccinate synthetase Atu2453 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu2455 PF03167 Uracil DNA glycosylase superfamily Atu2456 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu2457 PF04304 Protein of unknown function (DUF454) Atu2458 PF00005 ABC transporter Atu2459 PF01032 FecCD transport family Atu2460 PF01497 Periplasmic binding protein Atu2462 PF06228 Haem utilisation ChuX/HutX Atu2464 PF00551 Formyl transferase Atu2465 PF00672 HAMP domain Atu2465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu2465 PF00512 His Kinase A (phospho-acceptor) domain Atu2466 PF00486 Transcriptional regulatory protein, C terminal Atu2466 PF00072 Response regulator receiver domain Atu2469 PF03401 Tripartite tricarboxylate transporter family receptor Atu2471 PF01970 Tripartite tricarboxylate transporter TctA family Atu2474 PF01032 FecCD transport family Atu2475 PF01032 FecCD transport family Atu2476 PF00005 ABC transporter Atu2477 PF00210 Ferritin-like domain Atu2480 PF03466 LysR substrate binding domain Atu2480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2481 PF07859 alpha/beta hydrolase fold Atu2482 PF13533 Biotin-lipoyl like Atu2483 PF00873 AcrB/AcrD/AcrF family Atu2486 PF13396 Phospholipase_D-nuclease N-terminal Atu2486 PF13091 PLD-like domain Atu2487 PF08543 Phosphomethylpyrimidine kinase Atu2488 PF00484 Carbonic anhydrase Atu2490 PF01118 Semialdehyde dehydrogenase, NAD binding domain Atu2490 PF02774 Semialdehyde dehydrogenase, dimerisation domain Atu2492 PF00083 Sugar (and other) transporter Atu2493 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Atu2493 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Atu2493 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Atu2494 PF02233 NAD(P) transhydrogenase beta subunit Atu2495 PF01613 Flavin reductase like domain Atu2496 PF00881 Nitroreductase family Atu2497 PF00561 alpha/beta hydrolase fold Atu2498 PF01042 Endoribonuclease L-PSP Atu2499 PF00857 Isochorismatase family Atu2500 PF00296 Luciferase-like monooxygenase Atu2502 PF01126 Heme oxygenase Atu2503 PF00701 Dihydrodipicolinate synthetase family Atu2504 PF07729 FCD domain Atu2504 PF00392 Bacterial regulatory proteins, gntR family Atu2506 PF00528 Binding-protein-dependent transport system inner membrane component Atu2507 PF00528 Binding-protein-dependent transport system inner membrane component Atu2508 PF03459 TOBE domain Atu2508 PF00005 ABC transporter Atu2508 PF17912 MalK OB fold domain Atu2509 PF00294 pfkB family carbohydrate kinase Atu2510 PF03576 Peptidase family S58 Atu2511 PF01063 Amino-transferase class IV Atu2512 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2512 PF03466 LysR substrate binding domain Atu2514 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu2514 PF00005 ABC transporter Atu2515 PF00005 ABC transporter Atu2515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu2516 PF00528 Binding-protein-dependent transport system inner membrane component Atu2516 PF12911 N-terminal TM domain of oligopeptide transport permease C Atu2517 PF00528 Binding-protein-dependent transport system inner membrane component Atu2518 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu2519 PF01244 Membrane dipeptidase (Peptidase family M19) Atu2521 PF09924 Uncharacterised conserved protein (DUF2156) Atu2521 PF03706 Lysylphosphatidylglycerol synthase TM region Atu2525 PF07690 Major Facilitator Superfamily Atu2527 PF00775 Dioxygenase Atu2527 PF04444 Catechol dioxygenase N terminus Atu2528 PF00465 Iron-containing alcohol dehydrogenase Atu2530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu2530 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Atu2531 PF01613 Flavin reductase like domain Atu2535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu2535 PF00512 His Kinase A (phospho-acceptor) domain Atu2536 PF00486 Transcriptional regulatory protein, C terminal Atu2536 PF00072 Response regulator receiver domain Atu2538 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Atu2548 PF01259 SAICAR synthetase Atu2550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Atu2550 PF00529 HlyD membrane-fusion protein of T1SS Atu2551 PF00873 AcrB/AcrD/AcrF family Atu2552 PF02321 Outer membrane efflux protein Atu2553 PF01132 Elongation factor P (EF-P) OB domain Atu2553 PF09285 Elongation factor P, C-terminal Atu2553 PF08207 Elongation factor P (EF-P) KOW-like domain Atu2554 PF00152 tRNA synthetases class II (D, K and N) Atu2555 PF12544 Lysine-2,3-aminomutase Atu2555 PF04055 Radical SAM superfamily Atu2559 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2559 PF03466 LysR substrate binding domain Atu2560 PF01266 FAD dependent oxidoreductase Atu2562 PF00528 Binding-protein-dependent transport system inner membrane component Atu2563 PF03459 TOBE domain Atu2563 PF00005 ABC transporter Atu2565 PF03576 Peptidase family S58 Atu2566 PF05690 Thiazole biosynthesis protein ThiG Atu2568 PF01266 FAD dependent oxidoreductase Atu2569 PF13667 ThiC-associated domain Atu2569 PF01964 Radical SAM ThiC family Atu2571 PF00550 Phosphopantetheine attachment site Atu2577 PF00005 ABC transporter Atu2577 PF00664 ABC transporter transmembrane region Atu2578 PF13545 Crp-like helix-turn-helix domain Atu2578 PF00027 Cyclic nucleotide-binding domain Atu2580 PF00672 HAMP domain Atu2580 PF00211 Adenylate and Guanylate cyclase catalytic domain Atu2582 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Atu2582 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Atu2582 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Atu2583 PF13439 Glycosyltransferase Family 4 Atu2583 PF00534 Glycosyl transferases group 1 Atu2586 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu2586 PF00005 ABC transporter Atu2587 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu2588 PF00528 Binding-protein-dependent transport system inner membrane component Atu2589 PF00528 Binding-protein-dependent transport system inner membrane component Atu2589 PF12911 N-terminal TM domain of oligopeptide transport permease C Atu2591 PF13439 Glycosyltransferase Family 4 Atu2591 PF00534 Glycosyl transferases group 1 Atu2592 PF04101 Glycosyltransferase family 28 C-terminal domain Atu2592 PF03033 Glycosyltransferase family 28 N-terminal domain Atu2593 PF03932 CutC family Atu2596 PF00728 Glycosyl hydrolase family 20, catalytic domain Atu2596 PF02838 Glycosyl hydrolase family 20, domain 2 Atu2598 PF01418 Helix-turn-helix domain, rpiR family Atu2598 PF01380 SIS domain Atu2600 PF17912 MalK OB fold domain Atu2600 PF00005 ABC transporter Atu2600 PF03459 TOBE domain Atu2601 PF01547 Bacterial extracellular solute-binding protein Atu2602 PF00528 Binding-protein-dependent transport system inner membrane component Atu2603 PF00528 Binding-protein-dependent transport system inner membrane component Atu2606 PF00392 Bacterial regulatory proteins, gntR family Atu2606 PF07702 UTRA domain Atu2607 PF01380 SIS domain Atu2608 PF01979 Amidohydrolase family Atu2609 PF00480 ROK family Atu2610 PF01494 FAD binding domain Atu2611 PF01569 PAP2 superfamily Atu2612 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Atu2612 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Atu2612 PF13288 DXP reductoisomerase C-terminal domain Atu2613 PF00155 Aminotransferase class I and II Atu2615 PF17243 POTRA domain TamA domain 1 Atu2615 PF07244 Surface antigen variable number repeat Atu2615 PF01103 Surface antigen Atu2617 PF01584 CheW-like domain Atu2618 PF08447 PAS fold Atu2618 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu2618 PF13426 PAS domain Atu2619 PF02634 FdhD/NarQ family Atu2621 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Atu2622 PF02874 ATP synthase alpha/beta family, beta-barrel domain Atu2622 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atu2623 PF00231 ATP synthase Atu2624 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atu2624 PF02874 ATP synthase alpha/beta family, beta-barrel domain Atu2624 PF00306 ATP synthase alpha/beta chain, C terminal domain Atu2625 PF00213 ATP synthase delta (OSCP) subunit Atu2627 PF18074 Primosomal protein N C-terminal domain Atu2627 PF00270 DEAD/DEAH box helicase Atu2627 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Atu2627 PF17764 3′ DNA-binding domain (3′BD) Atu2628 PF00589 Phage integrase family Atu2628 PF02899 Phage integrase, N-terminal SAM-like domain Atu2632 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atu2632 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu2633 PF01810 LysE type translocator Atu2635 PF02817 e3 binding domain Atu2635 PF00364 Biotin-requiring enzyme Atu2635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Atu2636 PF02779 Transketolase, pyrimidine binding domain Atu2636 PF00676 Dehydrogenase E1 component Atu2636 PF16870 2-oxoglutarate dehydrogenase C-terminal Atu2636 PF16078 2-oxoglutarate dehydrogenase N-terminus Atu2637 PF00549 CoA-ligase Atu2637 PF02629 CoA binding domain Atu2638 PF08442 ATP-grasp domain Atu2638 PF00549 CoA-ligase Atu2639 PF00056 lactate/malate dehydrogenase, NAD binding domain Atu2639 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Atu2640 PF03969 AFG1-like ATPase Atu2641 PF02974 Protease inhibitor Inh Atu2642 PF13237 4Fe-4S dicluster domain Atu2642 PF13085 2Fe-2S iron-sulfur cluster binding domain Atu2643 PF00890 FAD binding domain Atu2643 PF02910 Fumarate reductase flavoprotein C-term Atu2645 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Atu2650 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Atu2650 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Atu2651 PF00814 Glycoprotease family Atu2652 PF03900 Porphobilinogen deaminase, C-terminal domain Atu2652 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Atu2658 PF00117 Glutamine amidotransferase class-I Atu2660 PF02594 Uncharacterised ACR, YggU family COG1872 Atu2661 PF00719 Inorganic pyrophosphatase Atu2663 PF03144 Elongation factor Tu domain 2 Atu2663 PF00009 Elongation factor Tu GTP binding domain Atu2663 PF00679 Elongation factor G C-terminus Atu2664 PF01432 Peptidase family M3 Atu2665 PF01047 MarR family Atu2666 PF07690 Major Facilitator Superfamily Atu2667 PF00764 Arginosuccinate synthase Atu2668 PF00106 short chain dehydrogenase Atu2669 PF01810 LysE type translocator Atu2670 PF00005 ABC transporter Atu2671 PF02653 Branched-chain amino acid transport system / permease component Atu2673 PF04055 Radical SAM superfamily Atu2676 PF01329 Pterin 4 alpha carbinolamine dehydratase Atu2677 PF01451 Low molecular weight phosphotyrosine protein phosphatase Atu2678 PF02834 LigT like Phosphoesterase Atu2679 PF13472 GDSL-like Lipase/Acylhydrolase family Atu2680 PF00005 ABC transporter Atu2682 PF01027 Inhibitor of apoptosis-promoting Bax1 Atu2685 PF00694 Aconitase C-terminal domain Atu2685 PF00330 Aconitase family (aconitate hydratase) Atu2686 PF00005 ABC transporter Atu2687 PF03379 CcmB protein Atu2688 PF01578 Cytochrome C assembly protein Atu2690 PF08534 Redoxin Atu2691 PF00990 Diguanylate cyclase, GGDEF domain Atu2692 PF04279 Intracellular septation protein A Atu2693 PF00448 SRP54-type protein, GTPase domain Atu2693 PF02881 SRP54-type protein, helical bundle domain Atu2694 PF00919 Uncharacterized protein family UPF0004 Atu2694 PF04055 Radical SAM superfamily Atu2695 PF01678 Diaminopimelate epimerase Atu2696 PF12706 Beta-lactamase superfamily domain Atu2697 PF00448 SRP54-type protein, GTPase domain Atu2697 PF02978 Signal peptide binding domain Atu2697 PF02881 SRP54-type protein, helical bundle domain Atu2698 PF02153 Prephenate dehydrogenase Atu2698 PF01817 Chorismate mutase type II Atu2699 PF00886 Ribosomal protein S16 Atu2700 PF01782 RimM N-terminal domain Atu2700 PF05239 PRC-barrel domain Atu2701 PF01746 tRNA (Guanine-1)-methyltransferase Atu2703 PF01245 Ribosomal protein L19 Atu2705 PF00005 ABC transporter Atu2705 PF00664 ABC transporter transmembrane region Atu2706 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Atu2706 PF00529 HlyD membrane-fusion protein of T1SS Atu2708 PF07690 Major Facilitator Superfamily Atu2709 PF00330 Aconitase family (aconitate hydratase) Atu2710 PF01435 Peptidase family M48 Atu2712 PF00005 ABC transporter Atu2713 PF00528 Binding-protein-dependent transport system inner membrane component Atu2714 PF01547 Bacterial extracellular solute-binding protein Atu2716 PF16326 ABC transporter C-terminal domain Atu2716 PF00005 ABC transporter Atu2718 PF04204 Homoserine O-succinyltransferase Atu2719 PF01263 Aldose 1-epimerase Atu2720 PF00912 Transglycosylase Atu2721 PF00348 Polyprenyl synthetase Atu2722 PF00691 OmpA family Atu2722 PF13488 Glycine zipper Atu2723 PF04551 GcpE protein Atu2724 PF07690 Major Facilitator Superfamily Atu2725 PF00455 DeoR C terminal sensor domain Atu2725 PF08220 DeoR-like helix-turn-helix domain Atu2726 PF02436 Conserved carboxylase domain Atu2726 PF00364 Biotin-requiring enzyme Atu2726 PF02785 Biotin carboxylase C-terminal domain Atu2726 PF00289 Biotin carboxylase, N-terminal domain Atu2726 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atu2726 PF00682 HMGL-like Atu2727 PF00072 Response regulator receiver domain Atu2727 PF00196 Bacterial regulatory proteins, luxR family Atu2728 PF00005 ABC transporter Atu2728 PF00664 ABC transporter transmembrane region Atu2730 PF06165 Glycosyltransferase family 36 Atu2730 PF10091 Putative glucoamylase Atu2730 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain Atu2732 PF07687 Peptidase dimerisation domain Atu2732 PF01546 Peptidase family M20/M25/M40 Atu2734 PF01266 FAD dependent oxidoreductase Atu2735 PF00291 Pyridoxal-phosphate dependent enzyme Atu2736 PF00920 Dehydratase family Atu2737 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Atu2737 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Atu2738 PF01370 NAD dependent epimerase/dehydratase family Atu2739 PF02913 FAD linked oxidases, C-terminal domain Atu2739 PF01565 FAD binding domain Atu2740 PF07729 FCD domain Atu2740 PF00392 Bacterial regulatory proteins, gntR family Atu2742 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Atu2743 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Atu2744 PF03480 Bacterial extracellular solute-binding protein, family 7 Atu2745 PF16177 Acetyl-coenzyme A synthetase N-terminus Atu2745 PF13193 AMP-binding enzyme C-terminal domain Atu2745 PF00501 AMP-binding enzyme Atu2747 PF01168 Alanine racemase, N-terminal domain Atu2748 PF00133 tRNA synthetases class I (I, L, M and V) Atu2748 PF08264 Anticodon-binding domain of tRNA Atu2748 PF13603 Leucyl-tRNA synthetase, Domain 2 Atu2751 PF00037 4Fe-4S binding domain Atu2751 PF11953 Domain of unknown function (DUF3470) Atu2755 PF01494 FAD binding domain Atu2757 PF00543 Nitrogen regulatory protein P-II Atu2758 PF00909 Ammonium Transporter Family Atu2759 PF17854 FtsK alpha domain Atu2759 PF01580 FtsK/SpoIIIE family Atu2759 PF09397 Ftsk gamma domain Atu2759 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Atu2760 PF03548 Outer membrane lipoprotein carrier protein LolA Atu2763 PF00486 Transcriptional regulatory protein, C terminal Atu2763 PF00072 Response regulator receiver domain Atu2765 PF02559 CarD-like/TRCF domain Atu2766 PF05088 Bacterial NAD-glutamate dehydrogenase Atu2767 PF11700 Vacuole effluxer Atg22 like Atu2768 PF07879 PHB/PHA accumulation regulator DNA-binding domain Atu2768 PF05233 PHB accumulation regulatory domain Atu2769 PF00108 Thiolase, N-terminal domain Atu2769 PF02803 Thiolase, C-terminal domain Atu2771 PF00210 Ferritin-like domain Atu2772 PF00293 NUDIX domain Atu2774 PF03572 Peptidase family S41 Atu2774 PF13180 PDZ domain Atu2776 PF02590 Predicted SPOUT methyltransferase Atu2778 PF01467 Cytidylyltransferase-like Atu2779 PF00171 Aldehyde dehydrogenase family Atu2780 PF00696 Amino acid kinase family Atu2780 PF01472 PUA domain Atu2781 PF01018 GTP1/OBG Atu2781 PF01926 50S ribosome-binding GTPase Atu2782 PF13302 Acetyltransferase (GNAT) domain Atu2784 PF01016 Ribosomal L27 protein Atu2785 PF00829 Ribosomal prokaryotic L21 protein Atu2788 PF03328 HpcH/HpaI aldolase/citrate lyase family Atu2790 PF00694 Aconitase C-terminal domain Atu2791 PF00180 Isocitrate/isopropylmalate dehydrogenase Atu2792 PF03150 Di-haem cytochrome c peroxidase Atu2793 PF07685 CobB/CobQ-like glutamine amidotransferase domain Atu2793 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atu2794 PF14824 Sirohaem biosynthesis protein central Atu2794 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu2794 PF10414 Sirohaem synthase dimerisation region Atu2795 PF01888 CbiD Atu2796 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu2798 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu2799 PF02571 Precorrin-6x reductase CbiJ/CobK Atu2800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu2801 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu2802 PF02570 Precorrin-8X methylmutase Atu2803 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Atu2804 PF02514 CobN/Magnesium Chelatase Atu2805 PF07683 Cobalamin synthesis protein cobW C-terminal domain Atu2805 PF02492 CobW/HypB/UreG, nucleotide-binding domain Atu2807 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Atu2808 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atu2808 PF07685 CobB/CobQ-like glutamine amidotransferase domain Atu2809 PF03186 CobD/Cbib protein Atu2810 PF00155 Aminotransferase class I and II Atu2811 PF13378 Enolase C-terminal domain-like Atu2811 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu2812 PF05336 L-rhamnose mutarotase Atu2813 PF01232 Mannitol dehydrogenase Rossmann domain Atu2813 PF08125 Mannitol dehydrogenase C-terminal domain Atu2814 PF08240 Alcohol dehydrogenase GroES-like domain Atu2814 PF00107 Zinc-binding dehydrogenase Atu2816 PF00248 Aldo/keto reductase family Atu2818 PF02653 Branched-chain amino acid transport system / permease component Atu2819 PF00005 ABC transporter Atu2821 PF00392 Bacterial regulatory proteins, gntR family Atu2821 PF07729 FCD domain Atu2822 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Atu2822 PF08666 SAF domain Atu2823 PF01808 AICARFT/IMPCHase bienzyme Atu2823 PF02142 MGS-like domain Atu2825 PF01189 16S rRNA methyltransferase RsmB/F Atu2825 PF01029 NusB family Atu2826 PF01435 Peptidase family M48 Atu2828 PF02195 ParB-like nuclease domain Atu2828 PF17762 HTH domain found in ParB protein Atu2829 PF13614 AAA domain Atu2830 PF02527 rRNA small subunit methyltransferase G Atu2831 PF13932 GidA associated domain Atu2831 PF01134 Glucose inhibited division protein A Atu2832 PF10396 GTP-binding protein TrmE N-terminus Atu2832 PF12631 MnmE helical domain Atu2832 PF01926 50S ribosome-binding GTPase Atu2833 PF07497 Rho termination factor, RNA-binding domain Atu2833 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atu2833 PF07498 Rho termination factor, N-terminal domain Atu2834 PF03653 Uncharacterised protein family (UPF0093) Atu2835 PF01208 Uroporphyrinogen decarboxylase (URO-D) Atu3069 PF08343 Ribonucleotide reductase N-terminal Atu3069 PF00317 Ribonucleotide reductase, all-alpha domain Atu3069 PF02867 Ribonucleotide reductase, barrel domain Atu3079 PF00575 S1 RNA binding domain Atu3079 PF00013 KH domain Atu3079 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Atu3079 PF01138 3' exoribonuclease family, domain 1 Atu3079 PF03725 3' exoribonuclease family, domain 2 Atu3084 PF11987 Translation-initiation factor 2 Atu3084 PF08364 Bacterial translation initiation factor IF-2 associated region Atu3084 PF04760 Translation initiation factor IF-2, N-terminal region Atu3084 PF03144 Elongation factor Tu domain 2 Atu3084 PF00009 Elongation factor Tu GTP binding domain Atu3100 PF00905 Penicillin binding protein transpeptidase domain Atu3100 PF00912 Transglycosylase Atu3123 PF00005 ABC transporter Atu3124 PF00005 ABC transporter Atu3192 PF00005 ABC transporter Atu3206 PF02789 Cytosol aminopeptidase family, N-terminal domain Atu3206 PF00883 Cytosol aminopeptidase family, catalytic domain Atu3242 PF03466 LysR substrate binding domain Atu3242 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu3288 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Atu3288 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Atu3288 PF06827 Zinc finger found in FPG and IleRS Atu3289 PF00378 Enoyl-CoA hydratase/isomerase Atu3317 PF01553 Acyltransferase Atu3471 PF00512 His Kinase A (phospho-acceptor) domain Atu3471 PF01627 Hpt domain Atu3471 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu3471 PF00072 Response regulator receiver domain Atu3471 PF00672 HAMP domain Atu3539 PF01266 FAD dependent oxidoreductase Atu3562 PF01738 Dienelactone hydrolase family Atu3608 PF02754 Cysteine-rich domain Atu3608 PF13183 4Fe-4S dicluster domain Atu3617 PF03129 Anticodon binding domain Atu3617 PF13393 Histidyl-tRNA synthetase Atu3622 PF00118 TCP-1/cpn60 chaperonin family Atu3630 PF08264 Anticodon-binding domain of tRNA Atu3630 PF00133 tRNA synthetases class I (I, L, M and V) Atu3636 PF02254 TrkA-N domain Atu3636 PF00999 Sodium/hydrogen exchanger family Atu3648 PF00486 Transcriptional regulatory protein, C terminal Atu3648 PF00072 Response regulator receiver domain Atu3650 PF00563 EAL domain Atu3650 PF01590 GAF domain Atu3650 PF00990 Diguanylate cyclase, GGDEF domain Atu3650 PF00360 Phytochrome region Atu3692 PF00510 Cytochrome c oxidase subunit III Atu3718 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu3730 PF06039 Malate:quinone oxidoreductase (Mqo) Atu3773 PF00106 short chain dehydrogenase Atu3775 PF05872 Bacterial protein of unknown function (DUF853) Atu3831 PF00403 Heavy-metal-associated domain Atu3870 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Atu3870 PF01578 Cytochrome C assembly protein Atu3907 PF00155 Aminotransferase class I and II Atu3951 PF00664 ABC transporter transmembrane region Atu3951 PF00005 ABC transporter Atu3963 PF00156 Phosphoribosyl transferase domain Atu3963 PF13537 Glutamine amidotransferase domain Atu4028 PF00570 HRDC domain Atu4028 PF01612 3'-5' exonuclease Atu4029 PF07690 Major Facilitator Superfamily Atu4039 PF03989 DNA gyrase C-terminal domain, beta-propeller Atu4039 PF00521 DNA gyrase/topoisomerase IV, subunit A Atu4070 PF00403 Heavy-metal-associated domain Atu4085 PF02872 5'-nucleotidase, C-terminal domain Atu4085 PF00149 Calcineurin-like phosphoesterase Atu4086 PF00149 Calcineurin-like phosphoesterase Atu4086 PF02872 5'-nucleotidase, C-terminal domain Atu4130 PF02190 ATP-dependent protease La (LON) substrate-binding domain Atu4130 PF05362 Lon protease (S16) C-terminal proteolytic domain Atu4130 PF00004 ATPase family associated with various cellular activities (AAA) Atu4144 PF10531 SLBB domain Atu4144 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Atu4144 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Atu4155 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Atu4155 PF12706 Beta-lactamase superfamily domain Atu4155 PF17770 Ribonuclease J C-terminal domain Atu4169 PF00072 Response regulator receiver domain Atu4169 PF00990 Diguanylate cyclase, GGDEF domain Atu4202 PF12111 Polyribonucleotide phosphorylase C terminal Atu4202 PF00575 S1 RNA binding domain Atu4202 PF10150 Ribonuclease E/G family Atu4230 PF00072 Response regulator receiver domain Atu4230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu4230 PF08448 PAS fold Atu4230 PF13188 PAS domain Atu4230 PF00512 His Kinase A (phospho-acceptor) domain Atu4235 PF00004 ATPase family associated with various cellular activities (AAA) Atu4235 PF07724 AAA domain (Cdc48 subfamily) Atu4235 PF17871 AAA lid domain Atu4235 PF10431 C-terminal, D2-small domain, of ClpB protein Atu4235 PF02861 Clp amino terminal domain, pathogenicity island component Atu4255 PF02684 Lipid-A-disaccharide synthetase Atu4286 PF02770 Acyl-CoA dehydrogenase, middle domain Atu4286 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu4286 PF12806 Acetyl-CoA dehydrogenase C-terminal like Atu4286 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu4300 PF02780 Transketolase, C-terminal domain Atu4300 PF02779 Transketolase, pyrimidine binding domain Atu4300 PF00364 Biotin-requiring enzyme Atu4303 PF02817 e3 binding domain Atu4303 PF00364 Biotin-requiring enzyme Atu4303 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Atu4326 PF07690 Major Facilitator Superfamily Atu4330 PF02347 Glycine cleavage system P-protein Atu4367 PF17760 UvrA interaction domain Atu4367 PF17755 UvrA DNA-binding domain Atu4385 PF12801 4Fe-4S binding domain Atu4385 PF13746 4Fe-4S dicluster domain Atu4385 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Atu4396 PF00924 Mechanosensitive ion channel Atu4402 PF00384 Molybdopterin oxidoreductase Atu4409 PF00107 Zinc-binding dehydrogenase Atu4409 PF08240 Alcohol dehydrogenase GroES-like domain Atu4428 PF03447 Homoserine dehydrogenase, NAD binding domain Atu4428 PF00742 Homoserine dehydrogenase Atu4428 PF01842 ACT domain Atu4518 PF01702 Queuine tRNA-ribosyltransferase Atu4569 PF08471 Class II vitamin B12-dependent ribonucleotide reductase Atu4569 PF02867 Ribonucleotide reductase, barrel domain Atu4574 PF01566 Natural resistance-associated macrophage protein Atu4576 PF00664 ABC transporter transmembrane region Atu4576 PF00005 ABC transporter Atu4586 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Atu4586 PF02824 TGS domain Atu4586 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Atu4586 PF03129 Anticodon binding domain Atu4589 PF01227 GTP cyclohydrolase I Atu4653 PF03702 Anhydro-N-acetylmuramic acid kinase Atu4669 PF00586 AIR synthase related protein, N-terminal domain Atu4669 PF02769 AIR synthase related protein, C-terminal domain Atu4669 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Atu4690 PF00180 Isocitrate/isopropylmalate dehydrogenase Atu4711 PF00005 ABC transporter Atu4712 PF13407 Periplasmic binding protein domain Atu4718 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Atu4718 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Atu4742 PF00189 Ribosomal protein S3, C-terminal domain Atu4742 PF07650 KH domain Atu4859 PF13476 AAA domain Atu4895 PF03738 Glutathionylspermidine synthase preATP-grasp Atu5014 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Atu5021 PF13361 UvrD-like helicase C-terminal domain Atu5021 PF12705 PD-(D/E)XK nuclease superfamily Atu5021 PF00580 UvrD/REP helicase N-terminal domain Atu5028 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu5028 PF00512 His Kinase A (phospho-acceptor) domain Atu5049 PF01274 Malate synthase Atu5065 PF00271 Helicase conserved C-terminal domain Atu5065 PF09382 RQC domain Atu5065 PF16124 RecQ zinc-binding Atu5065 PF00570 HRDC domain Atu5065 PF00270 DEAD/DEAH box helicase Atu5072 PF02867 Ribonucleotide reductase, barrel domain Atu5072 PF00317 Ribonucleotide reductase, all-alpha domain Atu5072 PF08343 Ribonucleotide reductase N-terminal Atu5092 PF13406 Transglycosylase SLT domain Atu5096 PF12170 DNA polymerase III tau subunit V interacting with alpha Atu5096 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Atu5096 PF12169 DNA polymerase III subunits gamma and tau domain III Atu5144 PF04898 Glutamate synthase central domain Atu5144 PF00310 Glutamine amidotransferases class-II Atu5144 PF01645 Conserved region in glutamate synthase Atu5144 PF01493 GXGXG motif Atu5154 PF00667 FAD binding domain Atu5154 PF00258 Flavodoxin Atu5154 PF00175 Oxidoreductase NAD-binding domain Atu5159 PF02801 Beta-ketoacyl synthase, C-terminal domain Atu5159 PF00109 Beta-ketoacyl synthase, N-terminal domain Atu5276 PF00958 GMP synthase C terminal domain Atu5276 PF00117 Glutamine amidotransferase class-I Atu5293 PF02673 Bacitracin resistance protein BacA Atu5304 PF13416 Bacterial extracellular solute-binding protein Atu5308 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Atu5308 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Atu5380 PF01156 Inosine-uridine preferring nucleoside hydrolase Atu5404 PF00342 Phosphoglucose isomerase Atu5436 PF00692 dUTPase Atu5542 PF02107 Flagellar L-ring protein Atu6030 PF00977 Histidine biosynthesis protein Atu6060 PF08343 Ribonucleotide reductase N-terminal Atu6060 PF00317 Ribonucleotide reductase, all-alpha domain Atu6060 PF02867 Ribonucleotide reductase, barrel domain Atu6072 PF03725 3' exoribonuclease family, domain 2 Atu6072 PF01138 3' exoribonuclease family, domain 1 Atu6072 PF00013 KH domain Atu6072 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Atu6072 PF00575 S1 RNA binding domain Atu6106 PF01625 Peptide methionine sulfoxide reductase Atu6120 PF00962 Adenosine/AMP deaminase Atu6123 PF01676 Metalloenzyme superfamily Atu6158 PF00528 Binding-protein-dependent transport system inner membrane component Atu6174 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu6177 PF00528 Binding-protein-dependent transport system inner membrane component Atu6177 PF12911 N-terminal TM domain of oligopeptide transport permease C Atu8032 PF08345 Flagellar M-ring protein C-terminal Atu8032 PF01514 Secretory protein of YscJ/FliF family Atu8064 PF01546 Peptidase family M20/M25/M40 Atu8064 PF07687 Peptidase dimerisation domain Atu8065 PF00327 Ribosomal protein L30p/L7e Atu8066 PF00468 Ribosomal protein L34 Atu8092 PF10755 Protein of unknown function (DUF2585) Atu8110 PF11940 Domain of unknown function (DUF3458) Ig-like fold Atu8110 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Atu8110 PF01433 Peptidase family M1 domain Atu8131 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Atu8131 PF00361 Proton-conducting membrane transporter Atu8131 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Atu8131 PF13244 Domain of unknown function (DUF4040) Atu8143 PF06629 MltA-interacting protein MipA Atu8147 PF01476 LysM domain Atu8148 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Atu8148 PF01872 RibD C-terminal domain Atu8162 PF00550 Phosphopantetheine attachment site Atu8165 PF08755 Hemimethylated DNA-binding protein YccV like Atu8192 PF00009 Elongation factor Tu GTP binding domain