Atu0001 PF03618 Atu0001 Atu0002 PF02545 Maf-like protein Atu0003 PF01488 Shikimate / quinate 5-dehydrogenase Atu0003 PF08501 Shikimate dehydrogenase substrate binding domain Atu0004 PF01121 Dephospho-CoA kinase Atu0005 PF00929 Exonuclease Atu0006 PF02556 Preprotein translocase subunit SecB Atu0007 PF04186 Atu0007 Atu0008 PF04280 Tim44-like domain Atu0009 PF03562 MltA specific insert domain Atu0009 PF06725 3D domain Atu0010 PF01713 Smr domain Atu0011 PF01381 Helix-turn-helix Atu0012 PF00204 DNA gyrase B Atu0012 PF00986 DNA gyrase B subunit, carboxyl terminus Atu0012 PF01751 Toprim domain Atu0012 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0013 PF00881 Nitroreductase family Atu0014 PF01557 Fumarylacetoacetate (FAA) hydrolase family Atu0015 PF06850 Atu0015 Atu0016 PF01863 Protein of unknown function DUF45 Atu0017 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Atu0018 PF00291 Pyridoxal-phosphate dependent enzyme Atu0019 PF00290 Tryptophan synthase alpha chain Atu0020 PF01039 Carboxyl transferase domain Atu0021 PF08245 Mur ligase middle domain Atu0022 PF00085 Thioredoxin Atu0023 PF00580 UvrD/REP helicase N-terminal domain Atu0023 PF12705 PD-(D/E)XK nuclease superfamily Atu0023 PF13361 UvrD-like helicase C-terminal domain Atu0024 PF12705 PD-(D/E)XK nuclease superfamily Atu0025 PF12804 MobA-like NTP transferase domain Atu0026 PF01636 Phosphotransferase enzyme family Atu0026 PF02367 Uncharacterised P-loop hydrolase UPF0079 Atu0027 PF00512 His Kinase A (phospho-acceptor) domain Atu0027 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0027 PF12860 Atu0027 Atu0029 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Atu0029 PF05221 S-adenosyl-L-homocysteine hydrolase Atu0030 PF00381 PTS HPr component phosphorylation site Atu0031 PF03610 PTS system fructose IIA component Atu0032 PF07475 HPr Serine kinase C-terminal domain Atu0033 PF00512 His Kinase A (phospho-acceptor) domain Atu0033 PF00672 HAMP domain Atu0033 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0033 PF13755 Atu0033 Atu0033 PF13756 Atu0033 Atu0034 PF00072 Response regulator receiver domain Atu0034 PF00486 Transcriptional regulatory protein, C terminal Atu0035 PF01293 Phosphoenolpyruvate carboxykinase Atu0036 PF00472 RF-1 domain Atu0037 PF00485 Phosphoribulokinase / Uridine kinase family Atu0038 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Atu0039 PF00977 Histidine biosynthesis protein Atu0040 PF00977 Histidine biosynthesis protein Atu0041 PF00117 Glutamine amidotransferase class-I Atu0043 PF00475 Imidazoleglycerol-phosphate dehydratase Atu0044 PF00227 Proteasome subunit Atu0045 PF00004 ATPase family associated with various cellular activities (AAA) Atu0045 PF07724 AAA domain (Cdc48 subfamily) Atu0045 PF10431 C-terminal, D2-small domain, of ClpB protein Atu0046 PF07182 Atu0046 Atu0047 PF01274 Malate synthase Atu0048 PF03734 L,D-transpeptidase catalytic domain Atu0049 PF06319 Protein of unknown function (DUF1052) Atu0050 PF00072 Response regulator receiver domain Atu0050 PF02954 Bacterial regulatory protein, Fis family Atu0051 PF00512 His Kinase A (phospho-acceptor) domain Atu0051 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0052 PF00270 DEAD/DEAH box helicase Atu0052 PF00271 Helicase conserved C-terminal domain Atu0052 PF04408 Helicase associated domain (HA2) Atu0052 PF08482 Atu0052 Atu0061 PF00270 DEAD/DEAH box helicase Atu0061 PF00271 Helicase conserved C-terminal domain Atu0061 PF00570 HRDC domain Atu0061 PF09382 RQC domain Atu0061 PF16124 Atu0061 Atu0062 PF00480 ROK family Atu0062 PF13412 Winged helix-turn-helix DNA-binding Atu0063 PF13407 Periplasmic binding protein domain Atu0064 PF02653 Atu0064 Atu0065 PF00005 ABC transporter Atu0066 PF00485 Phosphoribulokinase / Uridine kinase family Atu0068 PF00462 Glutaredoxin Atu0069 PF07972 NrdI Flavodoxin like Atu0070 PF00317 Ribonucleotide reductase, all-alpha domain Atu0070 PF02867 Ribonucleotide reductase, barrel domain Atu0070 PF08343 Ribonucleotide reductase N-terminal Atu0071 PF00268 Ribonucleotide reductase, small chain Atu0072 PF05990 Alpha/beta hydrolase of unknown function (DUF900) Atu0073 PF02463 RecF/RecN/SMC N terminal domain Atu0074 PF00899 ThiF family Atu0075 PF00583 Acetyltransferase (GNAT) family Atu0077 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Atu0077 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu0078 PF06347 Bacterial SH3 domain Atu0079 PF00294 pfkB family carbohydrate kinase Atu0080 PF03547 Atu0080 Atu0081 PF05175 Methyltransferase small domain Atu0082 PF00013 KH domain Atu0082 PF00575 S1 RNA binding domain Atu0082 PF01138 3' exoribonuclease family, domain 1 Atu0082 PF03725 3' exoribonuclease family, domain 2 Atu0082 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Atu0084 PF00312 Ribosomal protein S15 Atu0085 PF01509 TruB family pseudouridylate synthase (N terminal domain) Atu0085 PF09157 Pseudouridine synthase II TruB, C-terminal Atu0085 PF16198 Atu0085 Atu0086 PF02033 Ribosome-binding factor A Atu0087 PF00009 Elongation factor Tu GTP binding domain Atu0087 PF03144 Elongation factor Tu domain 2 Atu0087 PF04760 Translation initiation factor IF-2, N-terminal region Atu0087 PF08364 Atu0087 Atu0087 PF11987 Translation-initiation factor 2 Atu0088 PF04296 Protein of unknown function (DUF448) Atu0089 PF00575 S1 RNA binding domain Atu0089 PF08529 NusA N-terminal domain Atu0089 PF13184 NusA-like KH domain Atu0089 PF14520 Helix-hairpin-helix domain Atu0090 PF02576 Uncharacterised BCR, YhbC family COG0779 Atu0091 PF05977 Transmembrane secretion effector Atu0092 PF01471 Putative peptidoglycan binding domain Atu0092 PF13406 Transglycosylase SLT domain Atu0093 PF02132 RecR protein Atu0093 PF13662 Toprim domain Atu0094 PF03473 MOSC domain Atu0095 PF02575 YbaB/EbfC DNA-binding family Atu0096 PF12169 DNA polymerase III subunits gamma and tau domain III Atu0096 PF12362 Atu0096 Atu0096 PF13177 DNA polymerase III, delta subunit Atu0097 PF01230 HIT domain Atu0098 PF00293 NUDIX domain Atu0098 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain Atu0098 PF09297 NADH pyrophosphatase zinc ribbon domain Atu0099 PF00800 Prephenate dehydratase Atu0100 PF02348 Cytidylyltransferase Atu0101 PF00034 Cytochrome c Atu0102 PF02397 Atu0102 Atu0103 PF00905 Penicillin binding protein transpeptidase domain Atu0103 PF00912 Transglycosylase Atu0104 PF04073 Aminoacyl-tRNA editing domain Atu0106 PF00313 'Cold-shock' DNA-binding domain Atu0108 PF01546 Peptidase family M20/M25/M40 Atu0108 PF07687 Peptidase dimerisation domain Atu0109 PF01047 MarR family Atu0110 PF00476 DNA polymerase family A Atu0110 PF01367 5'-3' exonuclease, C-terminal SAM fold Atu0110 PF01612 3'-5' exonuclease Atu0110 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Atu0111 PF08975 Domain of unknown function (DUF1868) Atu0112 PF01783 Ribosomal L32p protein family Atu0113 PF00512 His Kinase A (phospho-acceptor) domain Atu0113 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0113 PF02743 Cache domain Atu0114 PF00072 Response regulator receiver domain Atu0114 PF00158 Sigma-54 interaction domain Atu0114 PF02954 Bacterial regulatory protein, Fis family Atu0116 PF03401 Tripartite tricarboxylate transporter family receptor Atu0117 PF07331 Atu0117 Atu0118 PF01970 Atu0118 Atu0119 PF04102 SlyX Atu0120 PF06041 Bacterial protein of unknown function (DUF924) Atu0121 PF00226 DnaJ domain Atu0121 PF00684 DnaJ central domain Atu0121 PF01556 DnaJ C terminal domain Atu0122 PF00012 Hsp70 protein Atu0125 PF01625 Peptide methionine sulfoxide reductase Atu0126 PF02608 Basic membrane protein Atu0127 PF00005 ABC transporter Atu0128 PF02653 Atu0128 Atu0129 PF02653 Atu0129 Atu0130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Atu0131 PF01048 Phosphorylase superfamily Atu0132 PF01791 DeoC/LacD family aldolase Atu0133 PF00591 Glycosyl transferase family, a/b domain Atu0133 PF02885 Glycosyl transferase family, helical bundle domain Atu0133 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Atu0134 PF13975 Atu0134 Atu0135 PF14681 Uracil phosphoribosyltransferase Atu0136 PF00962 Adenosine/AMP deaminase Atu0137 PF01676 Metalloenzyme superfamily Atu0138 PF02104 Atu0138 Atu0139 PF03626 Atu0139 Atu0140 PF00510 Cytochrome c oxidase subunit III Atu0141 PF00115 Cytochrome C and Quinol oxidase polypeptide I Atu0142 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Atu0142 PF06481 COX Aromatic Rich Motif Atu0143 PF00083 Sugar (and other) transporter Atu0145 PF00310 Glutamine amidotransferases class-II Atu0145 PF01493 GXGXG motif Atu0145 PF01645 Conserved region in glutamate synthase Atu0145 PF04898 Glutamate synthase central domain Atu0146 PF00175 Oxidoreductase NAD-binding domain Atu0146 PF00258 Flavodoxin Atu0146 PF00667 FAD binding domain Atu0147 PF07811 Atu0147 Atu0148 PF07811 Atu0148 Atu0149 PF13561 Enoyl-(Acyl carrier protein) reductase Atu0150 PF00109 Beta-ketoacyl synthase, N-terminal domain Atu0150 PF02801 Beta-ketoacyl synthase, C-terminal domain Atu0151 PF07977 FabA-like domain Atu0153 PF01475 Ferric uptake regulator family Atu0154 PF03458 Atu0154 Atu0156 PF06912 Atu0156 Atu0157 PF09084 NMT1/THI5 like Atu0158 PF00528 Binding-protein-dependent transport system inner membrane component Atu0159 PF00005 ABC transporter Atu0160 PF00392 Bacterial regulatory proteins, gntR family Atu0160 PF07702 UTRA domain Atu0161 PF01618 Atu0161 Atu0162 PF02472 Biopolymer transport protein ExbD/TolR Atu0163 PF13103 TonB C terminal Atu0164 PF02615 Malate/L-lactate dehydrogenase Atu0165 PF00196 Bacterial regulatory proteins, luxR family Atu0167 PF12625 Atu0167 Atu0167 PF12833 Helix-turn-helix domain Atu0168 PF00625 Guanylate kinase Atu0169 PF01979 Amidohydrolase family Atu0170 PF06299 Atu0170 Atu0171 PF00528 Binding-protein-dependent transport system inner membrane component Atu0172 PF00528 Binding-protein-dependent transport system inner membrane component Atu0173 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein Atu0174 PF00005 ABC transporter Atu0175 PF00132 Bacterial transferase hexapeptide (six repeats) Atu0176 PF00005 ABC transporter Atu0177 PF00005 ABC transporter Atu0178 PF06007 Atu0178 Atu0179 PF05861 Atu0179 Atu0180 PF05845 Bacterial phosphonate metabolism protein (PhnH) Atu0181 PF06754 Atu0181 Atu0182 PF00392 Bacterial regulatory proteins, gntR family Atu0182 PF07702 UTRA domain Atu0183 PF01113 Dihydrodipicolinate reductase, N-terminus Atu0183 PF05173 Dihydrodipicolinate reductase, C-terminus Atu0184 PF02685 Glucokinase Atu0185 PF02142 MGS-like domain Atu0186 PF03411 Penicillin-insensitive murein endopeptidase Atu0187 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu0188 PF00528 Binding-protein-dependent transport system inner membrane component Atu0189 PF00528 Binding-protein-dependent transport system inner membrane component Atu0189 PF12911 Atu0189 Atu0190 PF00005 ABC transporter Atu0190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu0193 PF00120 Glutamine synthetase, catalytic domain Atu0194 PF01266 FAD dependent oxidoreductase Atu0195 PF01202 Shikimate kinase Atu0196 PF00528 Binding-protein-dependent transport system inner membrane component Atu0197 PF00005 ABC transporter Atu0198 PF00528 Binding-protein-dependent transport system inner membrane component Atu0199 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Atu0200 PF05145 Atu0200 Atu0201 PF02082 Transcriptional regulator Atu0202 PF13343 Bacterial extracellular solute-binding protein Atu0203 PF01435 Peptidase family M48 Atu0204 PF05987 Atu0204 Atu0205 PF00171 Aldehyde dehydrogenase family Atu0206 PF03992 Antibiotic biosynthesis monooxygenase Atu0207 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0207 PF03466 LysR substrate binding domain Atu0208 PF00892 EamA-like transporter family Atu0209 PF04332 Atu0209 Atu0210 PF12802 MarR family Atu0211 PF00877 NlpC/P60 family Atu0213 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Atu0214 PF00883 Cytosol aminopeptidase family, catalytic domain Atu0215 PF13414 TPR repeat Atu0215 PF14559 Tetratricopeptide repeat Atu0216 PF00482 Type II secretion system (T2SS), protein F Atu0217 PF00482 Type II secretion system (T2SS), protein F Atu0218 PF00437 Type II/IV secretion system protein Atu0219 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atu0220 PF09476 Atu0220 Atu0221 PF00263 Atu0221 Atu0221 PF04972 BON domain Atu0221 PF13629 Atu0221 Atu0222 PF08666 SAF domain Atu0222 PF16976 Atu0222 Atu0223 PF01478 Type IV leader peptidase family Atu0224 PF04964 Atu0224 Atu0226 PF13629 Atu0226 Atu0228 PF10262 Rdx family Atu0229 PF07681 Atu0229 Atu0231 PF00117 Glutamine amidotransferase class-I Atu0232 PF07411 Domain of unknown function (DUF1508) Atu0233 PF01183 Glycosyl hydrolases family 25 Atu0234 PF00892 EamA-like transporter family Atu0235 PF00155 Aminotransferase class I and II Atu0235 PF00392 Bacterial regulatory proteins, gntR family Atu0237 PF02082 Transcriptional regulator Atu0238 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu0239 PF02311 AraC-like ligand binding domain Atu0239 PF12833 Helix-turn-helix domain Atu0240 PF09391 Protein of unknown function (DUF2000) Atu0241 PF00009 Elongation factor Tu GTP binding domain Atu0241 PF00679 Elongation factor G C-terminus Atu0241 PF03144 Elongation factor Tu domain 2 Atu0241 PF06421 GTP-binding protein LepA C-terminus Atu0242 PF00795 Carbon-nitrogen hydrolase Atu0245 PF01381 Helix-turn-helix Atu0245 PF07883 Cupin domain Atu0246 PF00583 Acetyltransferase (GNAT) family Atu0248 PF12833 Helix-turn-helix domain Atu0249 PF03480 Bacterial extracellular solute-binding protein, family 7 Atu0251 PF02915 Rubrerythrin Atu0252 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP Atu0253 PF12697 Alpha/beta hydrolase family Atu0254 PF00707 Translation initiation factor IF-3, C-terminal domain Atu0254 PF05198 Translation initiation factor IF-3, N-terminal domain Atu0255 PF01632 Ribosomal protein L35 Atu0256 PF00453 Ribosomal protein L20 Atu0257 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family Atu0258 PF01409 tRNA synthetases class II core domain (F) Atu0258 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Atu0259 PF01588 Putative tRNA binding domain Atu0259 PF03147 Ferredoxin-fold anticodon binding domain Atu0259 PF03483 B3/4 domain Atu0259 PF03484 tRNA synthetase B5 domain Atu0260 PF00248 Aldo/keto reductase family Atu0261 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0261 PF03466 LysR substrate binding domain Atu0262 PF00583 Acetyltransferase (GNAT) family Atu0263 PF00248 Aldo/keto reductase family Atu0264 PF01965 DJ-1/PfpI family Atu0264 PF12833 Helix-turn-helix domain Atu0265 PF00857 Isochorismatase family Atu0266 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu0269 PF02601 Atu0269 Atu0269 PF13742 Atu0269 Atu0270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu0270 PF13378 Enolase C-terminal domain-like Atu0271 PF00392 Bacterial regulatory proteins, gntR family Atu0271 PF07729 FCD domain Atu0272 PF01047 MarR family Atu0273 PF00892 EamA-like transporter family Atu0274 PF02073 Thermophilic metalloprotease (M29) Atu0275 PF04073 Aminoacyl-tRNA editing domain Atu0276 PF03960 ArsC family Atu0278 PF02834 LigT like Phosphoesterase Atu0279 PF00440 Bacterial regulatory proteins, tetR family Atu0281 PF00117 Glutamine amidotransferase class-I Atu0281 PF00958 GMP synthase C terminal domain Atu0281 PF03054 tRNA methyl transferase Atu0282 PF01048 Phosphorylase superfamily Atu0283 PF03061 Thioesterase superfamily Atu0284 PF03073 TspO/MBR family Atu0285 PF07433 Atu0285 Atu0286 PF09375 Imelysin Atu0287 PF06537 Atu0287 Atu0288 PF09375 Imelysin Atu0289 PF01189 NOL1/NOP2/sun family Atu0290 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel Atu0291 PF01370 NAD dependent epimerase/dehydratase family Atu0292 PF08331 Atu0292 Atu0292 PF13484 Atu0292 Atu0293 PF13417 Glutathione S-transferase, N-terminal domain Atu0293 PF14497 Glutathione S-transferase, C-terminal domain Atu0294 PF02673 Atu0294 Atu0296 PF01370 NAD dependent epimerase/dehydratase family Atu0297 PF07045 Protein of unknown function (DUF1330) Atu0298 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Atu0299 PF00300 Histidine phosphatase superfamily (branch 1) Atu0300 PF13649 Methyltransferase domain Atu0301 PF00712 DNA polymerase III beta subunit, N-terminal domain Atu0301 PF02767 DNA polymerase III beta subunit, central domain Atu0301 PF02768 DNA polymerase III beta subunit, C-terminal domain Atu0302 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu0303 PF02021 Uncharacterised protein family UPF0102 Atu0304 PF12464 Maltose acetyltransferase Atu0304 PF14602 Hexapeptide repeat of succinyl-transferase Atu0305 PF13416 Bacterial extracellular solute-binding protein Atu0306 PF00528 Binding-protein-dependent transport system inner membrane component Atu0307 PF00528 Binding-protein-dependent transport system inner membrane component Atu0308 PF00005 ABC transporter Atu0309 PF05899 Protein of unknown function (DUF861) Atu0310 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Atu0310 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Atu0311 PF01078 Magnesium chelatase, subunit ChlI Atu0311 PF13335 Atu0311 Atu0311 PF13541 Subunit ChlI of Mg-chelatase Atu0312 PF00291 Pyridoxal-phosphate dependent enzyme Atu0313 PF01810 Atu0313 Atu0314 PF00692 dUTPase Atu0315 PF00009 Elongation factor Tu GTP binding domain Atu0315 PF03144 Elongation factor Tu domain 2 Atu0315 PF16658 Atu0315 Atu0316 PF02441 Flavoprotein Atu0316 PF04127 DNA / pantothenate metabolism flavoprotein Atu0317 PF04237 YjbR Atu0318 PF04116 Atu0318 Atu0319 PF03109 Atu0319 Atu0320 PF01209 ubiE/COQ5 methyltransferase family Atu0321 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Atu0321 PF06827 Zinc finger found in FPG and IleRS Atu0321 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Atu0322 PF00378 Enoyl-CoA hydratase/isomerase family Atu0323 PF01649 Ribosomal protein S20 Atu0324 PF00308 Bacterial dnaA protein Atu0324 PF08299 Bacterial dnaA protein helix-turn-helix Atu0324 PF11638 DnaA N-terminal domain Atu0325 PF04055 Radical SAM superfamily Atu0325 PF06969 HemN C-terminal domain Atu0326 PF01725 Ham1 family Atu0327 PF01138 3' exoribonuclease family, domain 1 Atu0327 PF03725 3' exoribonuclease family, domain 2 Atu0328 PF01628 HrcA protein C terminal domain Atu0329 PF01025 GrpE Atu0330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Atu0331 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Atu0331 PF16321 Atu0331 Atu0332 PF00309 Atu0332 Atu0332 PF04552 Sigma-54, DNA binding domain Atu0332 PF04963 Sigma-54 factor, core binding domain Atu0333 PF00005 ABC transporter Atu0333 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu0334 PF03968 OstA-like protein Atu0335 PF06835 Lipopolysaccharide-assembly, LptC-related Atu0337 PF01343 Peptidase family S49 Atu0338 PF00216 Bacterial DNA-binding protein Atu0340 PF10672 S-adenosylmethionine-dependent methyltransferase Atu0341 PF00588 SpoU rRNA Methylase family Atu0341 PF08032 RNA 2'-O ribose methyltransferase substrate binding Atu0342 PF01252 Atu0342 Atu0343 PF00072 Response regulator receiver domain Atu0343 PF00512 His Kinase A (phospho-acceptor) domain Atu0343 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0344 PF13444 Acetyltransferase (GNAT) domain Atu0345 PF00488 MutS domain V Atu0345 PF01624 MutS domain I Atu0345 PF05188 MutS domain II Atu0345 PF05190 MutS family domain IV Atu0345 PF05192 MutS domain III Atu0346 PF01842 ACT domain Atu0346 PF01909 Nucleotidyltransferase domain Atu0346 PF01966 HD domain Atu0346 PF08335 GlnD PII-uridylyltransferase Atu0347 PF03023 Atu0347 Atu0348 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu0349 PF00579 tRNA synthetases class I (W and Y) Atu0351 PF01106 NifU-like domain Atu0351 PF08712 Scaffold protein Nfu/NifU N terminal Atu0352 PF00814 Glycoprotease family Atu0353 PF00583 Acetyltransferase (GNAT) family Atu0354 PF01475 Ferric uptake regulator family Atu0355 PF01553 Acyltransferase Atu0356 PF00919 Uncharacterized protein family UPF0004 Atu0356 PF01938 TRAM domain Atu0356 PF04055 Radical SAM superfamily Atu0357 PF02562 PhoH-like protein Atu0358 PF02130 Uncharacterized protein family UPF0054 Atu0359 PF00571 CBS domain Atu0359 PF03471 Transporter associated domain Atu0360 PF00795 Carbon-nitrogen hydrolase Atu0361 PF01381 Helix-turn-helix Atu0362 PF00438 S-adenosylmethionine synthetase, N-terminal domain Atu0362 PF02772 S-adenosylmethionine synthetase, central domain Atu0362 PF02773 S-adenosylmethionine synthetase, C-terminal domain Atu0363 PF02390 Putative methyltransferase Atu0364 PF00294 pfkB family carbohydrate kinase Atu0365 PF02646 Atu0365 Atu0366 PF01327 Polypeptide deformylase Atu0367 PF00551 Formyl transferase Atu0367 PF02911 Formyl transferase, C-terminal domain Atu0368 PF01416 tRNA pseudouridine synthase Atu0370 PF01546 Peptidase family M20/M25/M40 Atu0370 PF07687 Peptidase dimerisation domain Atu0371 PF00132 Bacterial transferase hexapeptide (six repeats) Atu0371 PF14602 Hexapeptide repeat of succinyl-transferase Atu0371 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Atu0372 PF03641 Possible lysine decarboxylase Atu0373 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0373 PF00672 HAMP domain Atu0373 PF02743 Cache domain Atu0374 PF01156 Inosine-uridine preferring nucleoside hydrolase Atu0375 PF00011 Hsp20/alpha crystallin family Atu0376 PF06620 Atu0376 Atu0377 PF13202 EF hand Atu0378 PF13419 Haloacid dehalogenase-like hydrolase Atu0379 PF00892 EamA-like transporter family Atu0380 PF00696 Amino acid kinase family Atu0383 PF01926 50S ribosome-binding GTPase Atu0384 PF02096 60Kd inner membrane protein Atu0384 PF14849 YidC periplasmic domain Atu0385 PF00825 Ribonuclease P Atu0387 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0387 PF00672 HAMP domain Atu0388 PF00672 HAMP domain Atu0388 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0390 PF08241 Methyltransferase domain Atu0391 PF00005 ABC transporter Atu0392 PF00528 Binding-protein-dependent transport system inner membrane component Atu0393 PF00528 Binding-protein-dependent transport system inner membrane component Atu0394 PF13416 Bacterial extracellular solute-binding protein Atu0395 PF00149 Calcineurin-like phosphoesterase Atu0396 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Atu0396 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Atu0397 PF05990 Alpha/beta hydrolase of unknown function (DUF900) Atu0398 PF05544 Proline racemase Atu0399 PF01979 Amidohydrolase family Atu0400 PF00156 Phosphoribosyl transferase domain Atu0401 PF00294 pfkB family carbohydrate kinase Atu0402 PF05448 Acetyl xylan esterase (AXE1) Atu0403 PF00756 Putative esterase Atu0404 PF00342 Phosphoglucose isomerase Atu0405 PF00501 AMP-binding enzyme Atu0405 PF13193 AMP-binding enzyme C-terminal domain Atu0406 PF00005 ABC transporter Atu0407 PF13343 Bacterial extracellular solute-binding protein Atu0408 PF00528 Binding-protein-dependent transport system inner membrane component Atu0409 PF00593 TonB dependent receptor Atu0409 PF07715 TonB-dependent Receptor Plug Domain Atu0410 PF12833 Helix-turn-helix domain Atu0413 PF01679 Atu0413 Atu0415 PF03060 Nitronate monooxygenase Atu0418 PF03976 Polyphosphate kinase 2 (PPK2) Atu0419 PF00512 His Kinase A (phospho-acceptor) domain Atu0419 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0420 PF12849 PBP superfamily domain Atu0421 PF00528 Binding-protein-dependent transport system inner membrane component Atu0421 PF12501 Atu0421 Atu0422 PF00528 Binding-protein-dependent transport system inner membrane component Atu0422 PF11812 Atu0422 Atu0423 PF00005 ABC transporter Atu0424 PF01895 PhoU domain Atu0425 PF00072 Response regulator receiver domain Atu0425 PF00486 Transcriptional regulatory protein, C terminal Atu0428 PF00202 Aminotransferase class-III Atu0429 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Atu0429 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Atu0430 PF01430 Hsp33 protein Atu0431 PF04379 Protein of unknown function (DUF525) Atu0432 PF01053 Cys/Met metabolism PLP-dependent enzyme Atu0434 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) Atu0436 PF13538 UvrD-like helicase C-terminal domain Atu0437 PF10053 Atu0437 Atu0438 PF00589 Phage integrase family Atu0443 PF00717 Peptidase S24-like Atu0443 PF01381 Helix-turn-helix Atu0444 PF15943 Atu0444 Atu0449 PF13730 Atu0449 Atu0450 PF02357 Transcription termination factor nusG Atu0454 PF04717 Phage-related baseplate assembly protein Atu0460 PF05489 Phage Tail Protein X Atu0461 PF05954 Phage late control gene D protein (GPD) Atu0462 PF13539 D-alanyl-D-alanine carboxypeptidase Atu0464 PF16083 Atu0464 Atu0465 PF13560 Helix-turn-helix domain Atu0466 PF14076 Atu0466 Atu0470 PF07369 Protein of unknown function (DUF1488) Atu0472 PF02469 Fasciclin domain Atu0473 PF14339 Atu0473 Atu0474 PF04542 Sigma-70 region 2 Atu0474 PF08281 Sigma-70, region 4 Atu0475 PF10099 Atu0475 Atu0476 PF00230 Major intrinsic protein Atu0478 PF13632 Glycosyl transferase family group 2 Atu0479 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu0480 PF01943 Atu0480 Atu0481 PF04932 Atu0481 Atu0482 PF01522 Polysaccharide deacetylase Atu0483 PF00717 Peptidase S24-like Atu0484 PF00072 Response regulator receiver domain Atu0484 PF00196 Bacterial regulatory proteins, luxR family Atu0485 PF06108 Protein of unknown function (DUF952) Atu0486 PF01180 Dihydroorotate dehydrogenase Atu0489 PF13489 Methyltransferase domain Atu0490 PF02588 Atu0490 Atu0491 PF02588 Atu0491 Atu0492 PF02627 Carboxymuconolactone decarboxylase family Atu0493 PF02082 Transcriptional regulator Atu0494 PF00270 DEAD/DEAH box helicase Atu0494 PF00271 Helicase conserved C-terminal domain Atu0494 PF08494 Atu0494 Atu0495 PF00149 Calcineurin-like phosphoesterase Atu0496 PF00582 Universal stress protein family Atu0498 PF01925 Atu0498 Atu0499 PF01471 Putative peptidoglycan binding domain Atu0499 PF08238 Sel1 repeat Atu0501 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu0501 PF02770 Acyl-CoA dehydrogenase, middle domain Atu0501 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu0501 PF12418 Atu0501 Atu0501 PF12806 Atu0501 Atu0502 PF00108 Thiolase, N-terminal domain Atu0502 PF02803 Thiolase, C-terminal domain Atu0503 PF00378 Enoyl-CoA hydratase/isomerase family Atu0503 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Atu0503 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Atu0506 PF13532 2OG-Fe(II) oxygenase superfamily Atu0507 PF03334 Atu0507 Atu0508 PF04066 Atu0508 Atu0509 PF01899 Atu0509 Atu0510 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atu0511 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Atu0514 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0514 PF11563 Protoglobin Atu0515 PF13466 STAS domain Atu0516 PF00072 Response regulator receiver domain Atu0517 PF01584 CheW-like domain Atu0517 PF01627 Hpt domain Atu0517 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0517 PF02895 Signal transducing histidine kinase, homodimeric domain Atu0518 PF01739 CheR methyltransferase, SAM binding domain Atu0518 PF03705 CheR methyltransferase, all-alpha domain Atu0519 PF00072 Response regulator receiver domain Atu0519 PF01339 CheB methylesterase Atu0520 PF00072 Response regulator receiver domain Atu0521 PF03975 CheD chemotactic sensory transduction Atu0523 PF01514 Secretory protein of YscJ/FliF family Atu0523 PF08345 Atu0523 Atu0524 PF00196 Bacterial regulatory proteins, luxR family Atu0525 PF00196 Bacterial regulatory proteins, luxR family Atu0526 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0526 PF00672 HAMP domain Atu0526 PF17201 Atu0526 Atu0527 PF00072 Response regulator receiver domain Atu0527 PF00512 His Kinase A (phospho-acceptor) domain Atu0527 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0527 PF12860 Atu0527 Atu0528 PF01741 Large-conductance mechanosensitive channel, MscL Atu0529 PF00155 Aminotransferase class I and II Atu0530 PF01370 NAD dependent epimerase/dehydratase family Atu0533 PF02545 Maf-like protein Atu0534 PF01176 Translation initiation factor 1A / IF-1 Atu0535 PF01451 Low molecular weight phosphotyrosine protein phosphatase Atu0536 PF06793 Atu0536 Atu0537 PF00815 Histidinol dehydrogenase Atu0538 PF11164 Atu0538 Atu0539 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Atu0542 PF00669 Bacterial flagellin N-terminal helical region Atu0542 PF00700 Bacterial flagellin C-terminal helical region Atu0543 PF00669 Bacterial flagellin N-terminal helical region Atu0543 PF00700 Bacterial flagellin C-terminal helical region Atu0545 PF00669 Bacterial flagellin N-terminal helical region Atu0545 PF00700 Bacterial flagellin C-terminal helical region Atu0546 PF00813 Atu0546 Atu0547 PF03748 Atu0547 Atu0548 PF02107 Atu0548 Atu0550 PF02119 Atu0550 Atu0551 PF13144 SAF-like Atu0552 PF00460 Flagella basal body rod protein Atu0552 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atu0553 PF02049 Atu0553 Atu0554 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atu0555 PF00460 Flagella basal body rod protein Atu0557 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atu0558 PF00460 Flagella basal body rod protein Atu0558 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atu0559 PF06748 Protein of unknown function (DUF1217) Atu0560 PF01618 Atu0560 Atu0561 PF01052 Surface presentation of antigens (SPOA) Atu0562 PF01052 Surface presentation of antigens (SPOA) Atu0563 PF01706 FliG C-terminal domain Atu0563 PF14841 FliG middle domain Atu0563 PF14842 FliG N-terminal domain Atu0564 PF01312 FlhB HrpN YscU SpaS Family Atu0567 PF00669 Bacterial flagellin N-terminal helical region Atu0567 PF00700 Bacterial flagellin C-terminal helical region Atu0569 PF00691 OmpA family Atu0569 PF13677 Atu0569 Atu0571 PF02120 Flagellar hook-length control protein FliK Atu0572 PF01464 Transglycosylase SLT domain Atu0573 PF00486 Transcriptional regulatory protein, C terminal Atu0574 PF00460 Flagella basal body rod protein Atu0574 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atu0574 PF07559 Flagellar basal body protein FlaE Atu0575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atu0576 PF00669 Bacterial flagellin N-terminal helical region Atu0576 PF00700 Bacterial flagellin C-terminal helical region Atu0577 PF07309 Atu0577 Atu0578 PF07378 Atu0578 Atu0579 PF03963 Atu0579 Atu0580 PF01313 Atu0580 Atu0581 PF00771 FHIPEP family Atu0582 PF01311 Atu0582 Atu0584 PF10135 Atu0584 Atu0587 PF03808 Atu0587 Atu0589 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Atu0589 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Atu0590 PF00356 Bacterial regulatory proteins, lacI family Atu0590 PF13377 Periplasmic binding protein-like domain Atu0591 PF01547 Bacterial extracellular solute-binding protein Atu0592 PF00528 Binding-protein-dependent transport system inner membrane component Atu0593 PF00528 Binding-protein-dependent transport system inner membrane component Atu0594 PF00128 Alpha amylase, catalytic domain Atu0594 PF11941 Domain of unknown function (DUF3459) Atu0595 PF00005 ABC transporter Atu0595 PF08402 TOBE domain Atu0597 PF00149 Calcineurin-like phosphoesterase Atu0597 PF02872 5'-nucleotidase, C-terminal domain Atu0598 PF00920 Dehydratase family Atu0599 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Atu0600 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Atu0600 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Atu0601 PF01266 FAD dependent oxidoreductase Atu0602 PF00120 Glutamine synthetase, catalytic domain Atu0603 PF03486 HI0933-like protein Atu0605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0605 PF03466 LysR substrate binding domain Atu0607 PF00463 Isocitrate lyase family Atu0608 PF01381 Helix-turn-helix Atu0608 PF06114 Domain of unknown function (DUF955) Atu0608 PF09856 Atu0608 Atu0609 PF13416 Bacterial extracellular solute-binding protein Atu0610 PF00005 ABC transporter Atu0610 PF08402 TOBE domain Atu0611 PF00528 Binding-protein-dependent transport system inner membrane component Atu0612 PF00528 Binding-protein-dependent transport system inner membrane component Atu0613 PF00528 Binding-protein-dependent transport system inner membrane component Atu0614 PF00512 His Kinase A (phospho-acceptor) domain Atu0614 PF00989 PAS fold Atu0614 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0614 PF13188 PAS domain Atu0619 PF02541 Ppx/GppA phosphatase family Atu0620 PF01728 FtsJ-like methyltransferase Atu0621 PF07690 Major Facilitator Superfamily Atu0622 PF00753 Metallo-beta-lactamase superfamily Atu0624 PF00478 IMP dehydrogenase / GMP reductase domain Atu0624 PF00571 CBS domain Atu0626 PF00107 Zinc-binding dehydrogenase Atu0626 PF08240 Alcohol dehydrogenase GroES-like domain Atu0627 PF01738 Dienelactone hydrolase family Atu0628 PF00672 HAMP domain Atu0628 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0629 PF00072 Response regulator receiver domain Atu0629 PF00486 Transcriptional regulatory protein, C terminal Atu0631 PF00994 Probable molybdopterin binding domain Atu0632 PF00288 GHMP kinases N terminal domain Atu0632 PF08544 GHMP kinases C terminal Atu0633 PF00515 Tetratricopeptide repeat Atu0633 PF13181 Tetratricopeptide repeat Atu0633 PF13432 Tetratricopeptide repeat Atu0633 PF14559 Tetratricopeptide repeat Atu0634 PF00348 Polyprenyl synthetase Atu0635 PF09413 Domain of unknown function (DUF2007) Atu0636 PF05175 Methyltransferase small domain Atu0637 PF01343 Peptidase family S49 Atu0639 PF02091 Glycyl-tRNA synthetase alpha subunit Atu0641 PF04011 LemA family Atu0642 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Atu0643 PF09972 Atu0643 Atu0644 PF02092 Atu0644 Atu0644 PF05746 DALR anticodon binding domain Atu0645 PF04463 Atu0645 Atu0646 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0646 PF00672 HAMP domain Atu0646 PF17200 Atu0646 Atu0647 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Atu0647 PF02843 Phosphoribosylglycinamide synthetase, C domain Atu0647 PF02844 Phosphoribosylglycinamide synthetase, N domain Atu0648 PF00575 S1 RNA binding domain Atu0648 PF09371 Tex-like protein N-terminal domain Atu0648 PF12836 Helix-hairpin-helix motif Atu0648 PF16921 Atu0648 Atu0649 PF02353 Mycolic acid cyclopropane synthetase Atu0650 PF06629 Atu0650 Atu0651 PF01040 UbiA prenyltransferase family Atu0653 PF06748 Protein of unknown function (DUF1217) Atu0654 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0654 PF03466 LysR substrate binding domain Atu0656 PF04107 Glutamate-cysteine ligase family 2(GCS2) Atu0657 PF04452 RNA methyltransferase Atu0658 PF01384 Atu0658 Atu0660 PF05116 Sucrose-6F-phosphate phosphohydrolase Atu0661 PF00534 Glycosyl transferases group 1 Atu0661 PF13439 Glycosyltransferase Family 4 Atu0662 PF00392 Bacterial regulatory proteins, gntR family Atu0662 PF07729 FCD domain Atu0663 PF11902 Atu0663 Atu0664 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0664 PF03466 LysR substrate binding domain Atu0665 PF01565 FAD binding domain Atu0665 PF02913 FAD linked oxidases, C-terminal domain Atu0666 PF01565 FAD binding domain Atu0667 PF02754 Atu0667 Atu0667 PF12838 4Fe-4S dicluster domain Atu0668 PF13505 Outer membrane protein beta-barrel domain Atu0669 PF03734 L,D-transpeptidase catalytic domain Atu0670 PF03352 Methyladenine glycosylase Atu0671 PF03601 Atu0671 Atu0672 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0672 PF03466 LysR substrate binding domain Atu0674 PF05016 Plasmid stabilisation system protein Atu0675 PF01402 Ribbon-helix-helix protein, copG family Atu0676 PF03129 Anticodon binding domain Atu0676 PF13393 Histidyl-tRNA synthetase Atu0677 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu0678 PF13393 Histidyl-tRNA synthetase Atu0679 PF01634 ATP phosphoribosyltransferase Atu0680 PF07681 Atu0680 Atu0682 PF00118 TCP-1/cpn60 chaperonin family Atu0683 PF00166 Chaperonin 10 Kd subunit Atu0684 PF13242 HAD-hyrolase-like Atu0684 PF13344 Haloacid dehalogenase-like hydrolase Atu0685 PF01687 Riboflavin kinase Atu0685 PF06574 FAD synthetase Atu0686 PF00133 tRNA synthetases class I (I, L, M and V) Atu0686 PF08264 Anticodon-binding domain of tRNA Atu0688 PF14437 Atu0688 Atu0689 PF00849 RNA pseudouridylate synthase Atu0689 PF01479 S4 domain Atu0690 PF03602 Conserved hypothetical protein 95 Atu0691 PF01734 Patatin-like phospholipase Atu0692 PF00999 Sodium/hydrogen exchanger family Atu0692 PF02254 TrkA-N domain Atu0693 PF01523 Putative modulator of DNA gyrase Atu0694 PF00459 Inositol monophosphatase family Atu0695 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Atu0696 PF13419 Haloacid dehalogenase-like hydrolase Atu0697 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Atu0698 PF09866 Atu0698 Atu0699 PF01119 DNA mismatch repair protein, C-terminal domain Atu0699 PF08676 MutL C terminal dimerisation domain Atu0699 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0700 PF00072 Response regulator receiver domain Atu0700 PF08448 PAS fold Atu0701 PF00563 EAL domain Atu0701 PF00990 GGDEF domain Atu0702 PF08450 SMP-30/Gluconolaconase/LRE-like region Atu0703 PF01081 KDPG and KHG aldolase Atu0704 PF05035 2-keto-3-deoxy-galactonokinase Atu0705 PF13561 Enoyl-(Acyl carrier protein) reductase Atu0706 PF01614 Bacterial transcriptional regulator Atu0706 PF09339 IclR helix-turn-helix domain Atu0707 PF00196 Bacterial regulatory proteins, luxR family Atu0707 PF03472 Autoinducer binding domain Atu0708 PF13379 NMT1-like family Atu0709 PF01883 Domain of unknown function DUF59 Atu0709 PF10609 ParA/MinD ATPase like Atu0710 PF01544 CorA-like Mg2+ transporter protein Atu0711 PF02705 Atu0711 Atu0712 PF07486 Cell Wall Hydrolase Atu0713 PF09527 Atu0713 Atu0714 PF00119 ATP synthase A chain Atu0715 PF00137 ATP synthase subunit C Atu0716 PF00430 ATP synthase B/B' CF(0) Atu0717 PF00430 ATP synthase B/B' CF(0) Atu0718 PF01243 Pyridoxamine 5'-phosphate oxidase Atu0719 PF00132 Bacterial transferase hexapeptide (six repeats) Atu0720 PF01351 Ribonuclease HII Atu0721 PF04055 Radical SAM superfamily Atu0723 PF01565 FAD binding domain Atu0723 PF02913 FAD linked oxidases, C-terminal domain Atu0724 PF01300 Telomere recombination Atu0724 PF03481 Putative GTP-binding controlling metal-binding Atu0726 PF00355 Rieske [2Fe-2S] domain Atu0726 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Atu0727 PF00111 2Fe-2S iron-sulfur cluster binding domain Atu0727 PF00175 Oxidoreductase NAD-binding domain Atu0727 PF00970 Oxidoreductase FAD-binding domain Atu0728 PF07886 Atu0728 Atu0730 PF07886 Atu0730 Atu0731 PF01544 CorA-like Mg2+ transporter protein Atu0732 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu0732 PF02770 Acyl-CoA dehydrogenase, middle domain Atu0732 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu0732 PF12806 Atu0732 Atu0733 PF00378 Enoyl-CoA hydratase/isomerase family Atu0735 PF05958 tRNA (Uracil-5-)-methyltransferase Atu0736 PF01479 S4 domain Atu0736 PF01728 FtsJ-like methyltransferase Atu0738 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0738 PF00672 HAMP domain Atu0738 PF05227 CHASE3 domain Atu0739 PF07670 Nucleoside recognition Atu0740 PF01037 AsnC family Atu0740 PF13404 AsnC-type helix-turn-helix domain Atu0741 PF13840 ACT domain Atu0742 PF12680 SnoaL-like domain Atu0743 PF13560 Helix-turn-helix domain Atu0744 PF12680 SnoaL-like domain Atu0745 PF02779 Transketolase, pyrimidine binding domain Atu0745 PF02780 Transketolase, C-terminal domain Atu0745 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Atu0746 PF02678 Pirin Atu0746 PF05726 Pirin C-terminal cupin domain Atu0747 PF02609 Exonuclease VII small subunit Atu0748 PF00850 Histone deacetylase domain Atu0749 PF02632 BioY family Atu0750 PF02361 Cobalt transport protein Atu0751 PF00005 ABC transporter Atu0752 PF06224 Atu0752 Atu0753 PF00925 GTP cyclohydrolase II Atu0753 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Atu0754 PF01264 Chorismate synthase Atu0755 PF07076 Atu0755 Atu0756 PF00300 Histidine phosphatase superfamily (branch 1) Atu0757 PF13561 Enoyl-(Acyl carrier protein) reductase Atu0758 PF00226 DnaJ domain Atu0758 PF01556 DnaJ C terminal domain Atu0759 PF16998 Atu0759 Atu0760 PF01243 Pyridoxamine 5'-phosphate oxidase Atu0760 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Atu0761 PF01925 Atu0761 Atu0762 PF03819 MazG nucleotide pyrophosphohydrolase domain Atu0763 PF13419 Haloacid dehalogenase-like hydrolase Atu0764 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu0765 PF01523 Putative modulator of DNA gyrase Atu0766 PF06776 Invasion associated locus B (IalB) protein Atu0767 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Atu0767 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Atu0768 PF00115 Cytochrome C and Quinol oxidase polypeptide I Atu0769 PF01040 UbiA prenyltransferase family Atu0770 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 Atu0771 PF00510 Cytochrome c oxidase subunit III Atu0772 PF06170 Atu0772 Atu0773 PF02104 Atu0773 Atu0774 PF02401 LytB protein Atu0775 PF01636 Phosphotransferase enzyme family Atu0776 PF00075 RNase H Atu0777 PF07876 Stress responsive A/B Barrel Domain Atu0778 PF03797 Autotransporter beta-domain Atu0779 PF08534 Redoxin Atu0780 PF11412 Disulphide bond corrector protein DsbC Atu0781 PF02622 Uncharacterized ACR, COG1678 Atu0782 PF05532 CsbD-like Atu0783 PF10005 Atu0783 Atu0783 PF15887 Atu0783 Atu0784 PF00563 EAL domain Atu0784 PF00990 GGDEF domain Atu0784 PF07696 7TMR-DISM extracellular 2 Atu0784 PF08447 PAS fold Atu0785 PF13302 Acetyltransferase (GNAT) domain Atu0786 PF00675 Insulinase (Peptidase family M16) Atu0786 PF05193 Peptidase M16 inactive domain Atu0787 PF00291 Pyridoxal-phosphate dependent enzyme Atu0787 PF14821 Threonine synthase N terminus Atu0790 PF13419 Haloacid dehalogenase-like hydrolase Atu0791 PF00392 Bacterial regulatory proteins, gntR family Atu0791 PF07729 FCD domain Atu0792 PF06935 Atu0792 Atu0794 PF01555 DNA methylase Atu0796 PF00326 Prolyl oligopeptidase family Atu0797 PF13419 Haloacid dehalogenase-like hydrolase Atu0798 PF00730 HhH-GPD superfamily base excision DNA repair protein Atu0798 PF14815 NUDIX domain Atu0800 PF13462 Thioredoxin Atu0801 PF02463 RecF/RecN/SMC N terminal domain Atu0802 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu0803 PF00391 PEP-utilising enzyme, mobile domain Atu0803 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Atu0803 PF02896 PEP-utilising enzyme, TIM barrel domain Atu0804 PF00375 Sodium:dicarboxylate symporter family Atu0806 PF07386 Atu0806 Atu0807 PF00753 Metallo-beta-lactamase superfamily Atu0809 PF05016 Plasmid stabilisation system protein Atu0810 PF03693 Uncharacterised protein family (UPF0156) Atu0811 PF06039 Atu0811 Atu0816 PF00009 Elongation factor Tu GTP binding domain Atu0817 PF01507 Phosphoadenosine phosphosulfate reductase family Atu0818 PF01507 Phosphoadenosine phosphosulfate reductase family Atu0819 PF02082 Transcriptional regulator Atu0820 PF13531 Bacterial extracellular solute-binding protein Atu0821 PF00528 Binding-protein-dependent transport system inner membrane component Atu0822 PF00528 Binding-protein-dependent transport system inner membrane component Atu0823 PF00005 ABC transporter Atu0823 PF12857 Atu0823 Atu0825 PF00107 Zinc-binding dehydrogenase Atu0825 PF08240 Alcohol dehydrogenase GroES-like domain Atu0826 PF00563 EAL domain Atu0826 PF00571 CBS domain Atu0826 PF00990 GGDEF domain Atu0828 PF00440 Bacterial regulatory proteins, tetR family Atu0828 PF13977 Bacterial transcriptional repressor Atu0829 PF00171 Aldehyde dehydrogenase family Atu0830 PF00732 GMC oxidoreductase Atu0830 PF05199 GMC oxidoreductase Atu0832 PF00654 Voltage gated chloride channel Atu0834 PF06089 Atu0834 Atu0835 PF02798 Glutathione S-transferase, N-terminal domain Atu0835 PF14497 Glutathione S-transferase, C-terminal domain Atu0836 PF00043 Glutathione S-transferase, C-terminal domain Atu0836 PF02798 Glutathione S-transferase, N-terminal domain Atu0837 PF12802 MarR family Atu0838 PF07690 Major Facilitator Superfamily Atu0840 PF01068 ATP dependent DNA ligase domain Atu0840 PF04675 DNA ligase N terminus Atu0840 PF04679 ATP dependent DNA ligase C terminal region Atu0841 PF00326 Prolyl oligopeptidase family Atu0842 PF04488 Glycosyltransferase sugar-binding region containing DXD motif Atu0843 PF00122 E1-E2 ATPase Atu0843 PF00403 Heavy-metal-associated domain Atu0843 PF00702 haloacid dehalogenase-like hydrolase Atu0844 PF03734 L,D-transpeptidase catalytic domain Atu0845 PF03734 L,D-transpeptidase catalytic domain Atu0846 PF01047 MarR family Atu0847 PF02566 OsmC-like protein Atu0848 PF09722 Atu0848 Atu0849 PF08808 Atu0849 Atu0850 PF00005 ABC transporter Atu0851 PF03795 YCII-related domain Atu0852 PF01047 MarR family Atu0853 PF05988 Atu0853 Atu0854 PF07617 Atu0854 Atu0855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu0856 PF03466 LysR substrate binding domain Atu0857 PF00106 short chain dehydrogenase Atu0858 PF02627 Carboxymuconolactone decarboxylase family Atu0859 PF11512 Agrobacterium tumefaciens protein Atu4866 Atu0860 PF05872 Atu0860 Atu0863 PF01638 HxlR-like helix-turn-helix Atu0864 PF00106 short chain dehydrogenase Atu0865 PF02311 AraC-like ligand binding domain Atu0865 PF12833 Helix-turn-helix domain Atu0866 PF01810 Atu0866 Atu0867 PF00248 Aldo/keto reductase family Atu0868 PF08279 HTH domain Atu0868 PF13280 Atu0868 Atu0869 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu0870 PF13489 Methyltransferase domain Atu0871 PF01063 Aminotransferase class IV Atu0872 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu0872 PF00672 HAMP domain Atu0873 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0873 PF03466 LysR substrate binding domain Atu0874 PF13420 Acetyltransferase (GNAT) domain Atu0876 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Atu0876 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Atu0877 PF00149 Calcineurin-like phosphoesterase Atu0878 PF08279 HTH domain Atu0878 PF13280 Atu0878 Atu0879 PF01810 Atu0879 Atu0881 PF01322 Cytochrome C' Atu0882 PF00034 Cytochrome c Atu0883 PF09489 Atu0883 Atu0884 PF09490 Atu0884 Atu0886 PF01965 DJ-1/PfpI family Atu0887 PF00583 Acetyltransferase (GNAT) family Atu0888 PF13411 MerR HTH family regulatory protein Atu0890 PF02583 Metal-sensitive transcriptional repressor Atu0891 PF01545 Cation efflux family Atu0893 PF00005 ABC transporter Atu0894 PF00528 Binding-protein-dependent transport system inner membrane component Atu0895 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Atu0897 PF00326 Prolyl oligopeptidase family Atu0897 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Atu0898 PF06059 Atu0898 Atu0899 PF00701 Dihydrodipicolinate synthetase family Atu0900 PF01522 Polysaccharide deacetylase Atu0901 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Atu0901 PF02805 Metal binding domain of Ada Atu0901 PF12833 Helix-turn-helix domain Atu0902 PF01594 Atu0902 Atu0903 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu0904 PF00582 Universal stress protein family Atu0905 PF01258 Prokaryotic dksA/traR C4-type zinc finger Atu0906 PF03006 Atu0906 Atu0907 PF13420 Acetyltransferase (GNAT) domain Atu0908 PF01641 SelR domain Atu0909 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atu0909 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Atu0909 PF13244 Atu0909 Atu0910 PF04039 Atu0910 Atu0911 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Atu0912 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atu0913 PF01899 Atu0913 Atu0914 PF04066 Atu0914 Atu0915 PF03334 Atu0915 Atu0916 PF05443 ROS/MUCR transcriptional regulator protein Atu0917 PF08299 Bacterial dnaA protein helix-turn-helix Atu0919 PF02657 Fe-S metabolism associated domain Atu0921 PF00512 His Kinase A (phospho-acceptor) domain Atu0921 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0922 PF07372 Protein of unknown function (DUF1491) Atu0923 PF10098 Atu0923 Atu0926 PF06742 Protein of unknown function (DUF1214) Atu0927 PF01810 Atu0927 Atu0928 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu0928 PF03466 LysR substrate binding domain Atu0929 PF00144 Beta-lactamase Atu0930 PF13372 Alginate export Atu0931 PF00905 Penicillin binding protein transpeptidase domain Atu0931 PF00912 Transglycosylase Atu0932 PF03692 Atu0932 Atu0933 PF00905 Penicillin binding protein transpeptidase domain Atu0934 PF15738 Atu0934 Atu0935 PF04221 RelB antitoxin Atu0936 PF13649 Methyltransferase domain Atu0937 PF00122 E1-E2 ATPase Atu0937 PF00403 Heavy-metal-associated domain Atu0937 PF00702 haloacid dehalogenase-like hydrolase Atu0938 PF00376 MerR family regulatory protein Atu0938 PF09278 MerR, DNA binding Atu0939 PF04014 Antidote-toxin recognition MazE Atu0940 PF02452 PemK-like protein Atu0942 PF07690 Major Facilitator Superfamily Atu0944 PF00251 Glycosyl hydrolases family 32 N-terminal domain Atu0945 PF02696 Atu0945 Atu0946 PF03435 Saccharopine dehydrogenase Atu0946 PF16653 Atu0946 Atu0947 PF01037 AsnC family Atu0947 PF13404 AsnC-type helix-turn-helix domain Atu0948 PF01638 HxlR-like helix-turn-helix Atu0949 PF05368 NmrA-like family Atu0950 PF10081 Atu0950 Atu0950 PF15420 Atu0950 Atu0951 PF03237 Terminase-like family Atu0953 PF07876 Stress responsive A/B Barrel Domain Atu0954 PF04860 Phage portal protein Atu0956 PF04586 Atu0956 Atu0957 PF05065 Phage capsid family Atu0959 PF11367 Protein of unknown function (DUF3168) Atu0960 PF07690 Major Facilitator Superfamily Atu0962 PF10387 Protein of unknown function (DUF2442) Atu0964 PF09343 Atu0964 Atu0965 PF09356 Atu0965 Atu0965 PF09931 Atu0965 Atu0966 PF00877 NlpC/P60 family Atu0967 PF13547 Atu0967 Atu0967 PF13550 Atu0967 Atu0970 PF00072 Response regulator receiver domain Atu0970 PF00486 Transcriptional regulatory protein, C terminal Atu0971 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0974 PF03100 CcmE Atu0975 PF01578 Atu0975 Atu0975 PF16327 Atu0975 Atu0976 PF03918 Cytochrome C biogenesis protein Atu0977 PF13180 PDZ domain Atu0977 PF13365 Trypsin-like peptidase domain Atu0978 PF00072 Response regulator receiver domain Atu0978 PF00486 Transcriptional regulatory protein, C terminal Atu0979 PF00512 His Kinase A (phospho-acceptor) domain Atu0979 PF00672 HAMP domain Atu0979 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0981 PF03710 Glutamate-ammonia ligase adenylyltransferase Atu0981 PF08335 GlnD PII-uridylyltransferase Atu0982 PF00512 His Kinase A (phospho-acceptor) domain Atu0982 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu0982 PF08447 PAS fold Atu0982 PF12860 Atu0982 Atu0983 PF02627 Carboxymuconolactone decarboxylase family Atu0984 PF01433 Peptidase family M1 Atu0984 PF11940 Domain of unknown function (DUF3458) Atu0985 PF00892 EamA-like transporter family Atu0987 PF03167 Uracil DNA glycosylase superfamily Atu0988 PF00012 Hsp70 protein Atu0989 PF00990 GGDEF domain Atu0989 PF13188 PAS domain Atu0990 PF13561 Enoyl-(Acyl carrier protein) reductase Atu0991 PF01545 Cation efflux family Atu0992 PF00892 EamA-like transporter family Atu0993 PF00440 Bacterial regulatory proteins, tetR family Atu0993 PF16925 Atu0993 Atu0994 PF01946 Thi4 family Atu0994 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase Atu0995 PF00805 Pentapeptide repeats (8 copies) Atu0995 PF13599 Pentapeptide repeats (9 copies) Atu0996 PF08240 Alcohol dehydrogenase GroES-like domain Atu0996 PF13602 Zinc-binding dehydrogenase Atu0997 PF01638 HxlR-like helix-turn-helix Atu0998 PF02673 Atu0998 Atu0999 PF00571 CBS domain Atu0999 PF01769 Divalent cation transporter Atu0999 PF03448 MgtE intracellular N domain Atu1000 PF07690 Major Facilitator Superfamily Atu1001 PF00781 Diacylglycerol kinase catalytic domain Atu1002 PF00202 Aminotransferase class-III Atu1003 PF02566 OsmC-like protein Atu1004 PF01850 PIN domain Atu1005 PF09957 Atu1005 Atu1006 PF01048 Phosphorylase superfamily Atu1006 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus Atu1009 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) Atu1011 PF00155 Aminotransferase class I and II Atu1013 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu1013 PF14759 Reductase C-terminal Atu1014 PF03328 HpcH/HpaI aldolase/citrate lyase family Atu1020 PF02530 Atu1020 Atu1021 PF02530 Atu1021 Atu1022 PF01464 Transglycosylase SLT domain Atu1024 PF00701 Dihydrodipicolinate synthetase family Atu1025 PF01668 SmpB protein Atu1027 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu1027 PF11563 Protoglobin Atu1028 PF01936 NYN domain Atu1029 PF01192 RNA polymerase Rpb6 Atu1030 PF02824 TGS domain Atu1030 PF04607 Region found in RelA / SpoT proteins Atu1030 PF13291 ACT domain Atu1030 PF13328 HD domain Atu1032 PF09835 Atu1032 Atu1033 PF01648 4'-phosphopantetheinyl transferase superfamily Atu1034 PF00717 Peptidase S24-like Atu1034 PF10502 Signal peptidase, peptidase S26 Atu1035 PF00035 Double-stranded RNA binding motif Atu1035 PF14622 Ribonuclease-III-like Atu1036 PF01926 50S ribosome-binding GTPase Atu1036 PF07650 KH domain Atu1037 PF00027 Cyclic nucleotide-binding domain Atu1037 PF13545 Crp-like helix-turn-helix domain Atu1038 PF00072 Response regulator receiver domain Atu1039 PF02565 Recombination protein O C terminal Atu1039 PF11967 Recombination protein O N terminal Atu1040 PF07690 Major Facilitator Superfamily Atu1041 PF08241 Methyltransferase domain Atu1042 PF03473 MOSC domain Atu1042 PF03476 MOSC N-terminal beta barrel domain Atu1043 PF01966 HD domain Atu1044 PF10101 Atu1044 Atu1045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu1046 PF09084 NMT1/THI5 like Atu1047 PF00005 ABC transporter Atu1048 PF00528 Binding-protein-dependent transport system inner membrane component Atu1049 PF09223 YodA lipocalin-like domain Atu1050 PF00924 Mechanosensitive ion channel Atu1053 PF01571 Aminomethyltransferase folate-binding domain Atu1053 PF08669 Glycine cleavage T-protein C-terminal barrel domain Atu1056 PF09539 Atu1056 Atu1057 PF00293 NUDIX domain Atu1058 PF02694 Atu1058 Atu1059 PF02586 Uncharacterised ACR, COG2135 Atu1060 PF00072 Response regulator receiver domain Atu1060 PF00990 GGDEF domain Atu1062 PF01066 CDP-alcohol phosphatidyltransferase Atu1062 PF08009 Atu1062 Atu1063 PF02666 Atu1063 Atu1064 PF00005 ABC transporter Atu1064 PF00664 ABC transporter transmembrane region Atu1066 PF03641 Possible lysine decarboxylase Atu1067 PF00905 Penicillin binding protein transpeptidase domain Atu1067 PF03717 Penicillin-binding Protein dimerisation domain Atu1068 PF00892 EamA-like transporter family Atu1069 PF00561 alpha/beta hydrolase fold Atu1070 PF04828 Glutathione-dependent formaldehyde-activating enzyme Atu1071 PF04828 Glutathione-dependent formaldehyde-activating enzyme Atu1072 PF04480 Protein of unknown function (DUF559) Atu1073 PF01406 tRNA synthetases class I (C) catalytic domain Atu1073 PF09190 DALR domain Atu1074 PF00106 short chain dehydrogenase Atu1075 PF00156 Phosphoribosyl transferase domain Atu1075 PF13537 Glutamine amidotransferase domain Atu1076 PF02674 Atu1076 Atu1077 PF13481 AAA domain Atu1077 PF13541 Subunit ChlI of Mg-chelatase Atu1079 PF03693 Uncharacterised protein family (UPF0156) Atu1080 PF00842 Alanine racemase, C-terminal domain Atu1080 PF01168 Alanine racemase, N-terminal domain Atu1081 PF02311 AraC-like ligand binding domain Atu1081 PF12833 Helix-turn-helix domain Atu1082 PF03591 Atu1082 Atu1083 PF05437 Atu1083 Atu1084 PF00772 DnaB-like helicase N terminal domain Atu1084 PF03796 DnaB-like helicase C terminal domain Atu1085 PF12802 MarR family Atu1086 PF07690 Major Facilitator Superfamily Atu1087 PF00529 HlyD family secretion protein Atu1087 PF16576 Atu1087 Atu1088 PF01281 Ribosomal protein L9, N-terminal domain Atu1088 PF03948 Ribosomal protein L9, C-terminal domain Atu1090 PF01084 Ribosomal protein S18 Atu1091 PF01250 Ribosomal protein S6 Atu1093 PF00248 Aldo/keto reductase family Atu1094 PF00698 Acyl transferase domain Atu1095 PF13561 Enoyl-(Acyl carrier protein) reductase Atu1096 PF00550 Phosphopantetheine attachment site Atu1097 PF00109 Beta-ketoacyl synthase, N-terminal domain Atu1097 PF02801 Beta-ketoacyl synthase, C-terminal domain Atu1099 PF02618 YceG-like family Atu1100 PF03755 Atu1100 Atu1100 PF08340 Atu1100 Atu1101 PF00625 Guanylate kinase Atu1103 PF00398 Ribosomal RNA adenine dimethylase Atu1104 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Atu1105 PF13624 SurA N-terminal domain Atu1106 PF04453 Organic solvent tolerance protein Atu1107 PF03739 Atu1107 Atu1108 PF03739 Atu1108 Atu1110 PF00883 Cytosol aminopeptidase family, catalytic domain Atu1110 PF02789 Cytosol aminopeptidase family, N-terminal domain Atu1111 PF04364 DNA polymerase III chi subunit, HolC Atu1112 PF00990 GGDEF domain Atu1112 PF01590 GAF domain Atu1113 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu1114 PF00563 EAL domain Atu1114 PF00990 GGDEF domain Atu1115 PF00512 His Kinase A (phospho-acceptor) domain Atu1115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1116 PF00072 Response regulator receiver domain Atu1116 PF00196 Bacterial regulatory proteins, luxR family Atu1117 PF03928 Domain of unknown function (DUF336) Atu1118 PF00005 ABC transporter Atu1118 PF12848 ABC transporter Atu1119 PF00990 GGDEF domain Atu1121 PF13410 Glutathione S-transferase, C-terminal domain Atu1121 PF13417 Glutathione S-transferase, N-terminal domain Atu1122 PF00334 Nucleoside diphosphate kinase Atu1124 PF11706 CGNR zinc finger Atu1125 PF02653 Atu1125 Atu1126 PF02391 MoaE protein Atu1127 PF02597 ThiS family Atu1128 PF01066 CDP-alcohol phosphatidyltransferase Atu1129 PF01541 GIY-YIG catalytic domain Atu1129 PF02151 UvrB/uvrC motif Atu1129 PF08459 UvrC Helix-hairpin-helix N-terminal Atu1130 PF00106 short chain dehydrogenase Atu1131 PF13505 Outer membrane protein beta-barrel domain Atu1132 PF13417 Glutathione S-transferase, N-terminal domain Atu1133 PF00445 Ribonuclease T2 family Atu1134 PF03706 Atu1134 Atu1135 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ Atu1136 PF00384 Molybdopterin oxidoreductase Atu1136 PF01568 Molydopterin dinucleotide binding domain Atu1136 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Atu1137 PF00293 NUDIX domain Atu1138 PF01278 Omptin family Atu1139 PF01278 Omptin family Atu1140 PF00551 Formyl transferase Atu1141 PF00586 AIR synthase related protein, N-terminal domain Atu1141 PF02769 AIR synthase related protein, C-terminal domain Atu1142 PF01594 Atu1142 Atu1144 PF02503 Polyphosphate kinase middle domain Atu1144 PF13089 Polyphosphate kinase N-terminal domain Atu1144 PF13090 Polyphosphate kinase C-terminal domain Atu1145 PF02541 Ppx/GppA phosphatase family Atu1146 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1148 PF13449 Esterase-like activity of phytase Atu1149 PF00211 Adenylate and Guanylate cyclase catalytic domain Atu1151 PF00570 HRDC domain Atu1151 PF01612 3'-5' exonuclease Atu1152 PF07690 Major Facilitator Superfamily Atu1153 PF00152 tRNA synthetases class II (D, K and N) Atu1153 PF01336 OB-fold nucleic acid binding domain Atu1153 PF02938 GAD domain Atu1154 PF13515 Atu1154 Atu1155 PF06123 Atu1155 Atu1156 PF00916 Atu1156 Atu1156 PF01740 STAS domain Atu1158 PF00521 DNA gyrase/topoisomerase IV, subunit A Atu1158 PF03989 DNA gyrase C-terminal domain, beta-propeller Atu1159 PF04376 Atu1159 Atu1159 PF04377 Atu1159 Atu1160 PF06271 Atu1160 Atu1161 PF00490 Delta-aminolevulinic acid dehydratase Atu1163 PF13463 Winged helix DNA-binding domain Atu1164 PF01471 Putative peptidoglycan binding domain Atu1164 PF03734 L,D-transpeptidase catalytic domain Atu1165 PF00464 Serine hydroxymethyltransferase Atu1166 PF03477 ATP cone domain Atu1169 PF00677 Lumazine binding domain Atu1170 PF01810 Atu1170 Atu1171 PF00885 6,7-dimethyl-8-ribityllumazine synthase Atu1172 PF01029 NusB family Atu1173 PF07690 Major Facilitator Superfamily Atu1174 PF03030 Inorganic H+ pyrophosphatase Atu1175 PF04355 SmpA / OmlA family Atu1176 PF03981 Atu1176 Atu1177 PF02620 Atu1177 Atu1178 PF02504 Fatty acid synthesis protein Atu1179 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Atu1179 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Atu1180 PF00216 Bacterial DNA-binding protein Atu1181 PF13411 MerR HTH family regulatory protein Atu1183 PF00940 DNA-dependent RNA polymerase Atu1183 PF14700 DNA-directed RNA polymerase N-terminal Atu1187 PF03906 Atu1187 Atu1190 PF07275 Antirestriction protein (ArdA) Atu1192 PF12802 MarR family Atu1194 PF00589 Phage integrase family Atu1195 PF00122 E1-E2 ATPase Atu1195 PF00403 Heavy-metal-associated domain Atu1195 PF00702 haloacid dehalogenase-like hydrolase Atu1196 PF00111 2Fe-2S iron-sulfur cluster binding domain Atu1196 PF00175 Oxidoreductase NAD-binding domain Atu1196 PF00970 Oxidoreductase FAD-binding domain Atu1197 PF00376 MerR family regulatory protein Atu1197 PF09278 MerR, DNA binding Atu1198 PF00528 Binding-protein-dependent transport system inner membrane component Atu1199 PF00528 Binding-protein-dependent transport system inner membrane component Atu1199 PF12911 Atu1199 Atu1200 PF00005 ABC transporter Atu1200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu1201 PF00005 ABC transporter Atu1201 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu1202 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu1203 PF00403 Heavy-metal-associated domain Atu1204 PF02386 Cation transport protein Atu1205 PF00291 Pyridoxal-phosphate dependent enzyme Atu1205 PF00585 C-terminal regulatory domain of Threonine dehydratase Atu1206 PF10115 Atu1206 Atu1207 PF00990 GGDEF domain Atu1208 PF02525 Flavodoxin-like fold Atu1209 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu1209 PF03466 LysR substrate binding domain Atu1210 PF00149 Calcineurin-like phosphoesterase Atu1210 PF02872 5'-nucleotidase, C-terminal domain Atu1212 PF06718 Atu1212 Atu1213 PF14247 Atu1213 Atu1214 PF01872 RibD C-terminal domain Atu1215 PF00581 Rhodanese-like domain Atu1216 PF01411 tRNA synthetases class II (A) Atu1216 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Atu1217 PF00291 Pyridoxal-phosphate dependent enzyme Atu1218 PF00875 DNA photolyase Atu1218 PF03441 FAD binding domain of DNA photolyase Atu1219 PF06169 Protein of unknown function (DUF982) Atu1220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Atu1222 PF11154 Atu1222 Atu1226 PF06055 Atu1226 Atu1232 PF06897 Atu1232 Atu1236 PF02397 Atu1236 Atu1236 PF13727 CoA-binding domain Atu1237 PF00534 Glycosyl transferases group 1 Atu1237 PF13579 Glycosyl transferase 4-like domain Atu1238 PF02563 Polysaccharide biosynthesis/export protein Atu1238 PF10531 SLBB domain Atu1239 PF02706 Chain length determinant protein Atu1240 PF13480 Acetyltransferase (GNAT) domain Atu1241 PF11003 Atu1241 Atu1242 PF02628 Atu1242 Atu1243 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase Atu1244 PF01118 Semialdehyde dehydrogenase, NAD binding domain Atu1245 PF00491 Arginase family Atu1246 PF00380 Ribosomal protein S9/S16 Atu1247 PF00572 Ribosomal protein L13 Atu1248 PF00892 EamA-like transporter family Atu1250 PF13380 CoA binding domain Atu1251 PF01053 Cys/Met metabolism PLP-dependent enzyme Atu1253 PF05899 Protein of unknown function (DUF861) Atu1254 PF12840 Helix-turn-helix domain Atu1255 PF13561 Enoyl-(Acyl carrier protein) reductase Atu1256 PF00067 Cytochrome P450 Atu1257 PF00990 GGDEF domain Atu1258 PF00574 Clp protease Atu1259 PF06689 ClpX C4-type zinc finger Atu1259 PF07724 AAA domain (Cdc48 subfamily) Atu1259 PF10431 C-terminal, D2-small domain, of ClpB protein Atu1261 PF00004 ATPase family associated with various cellular activities (AAA) Atu1261 PF02190 ATP-dependent protease La (LON) domain Atu1261 PF05362 Lon protease (S16) C-terminal proteolytic domain Atu1262 PF00216 Bacterial DNA-binding protein Atu1263 PF13449 Esterase-like activity of phytase Atu1268 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Atu1269 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Atu1270 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Atu1271 PF04828 Glutathione-dependent formaldehyde-activating enzyme Atu1272 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Atu1274 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Atu1275 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Atu1275 PF10531 SLBB domain Atu1275 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Atu1276 PF00384 Molybdopterin oxidoreductase Atu1276 PF09326 Atu1276 Atu1276 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Atu1276 PF13510 2Fe-2S iron-sulfur cluster binding domain Atu1277 PF00146 NADH dehydrogenase Atu1278 PF12838 4Fe-4S dicluster domain Atu1279 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Atu1280 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Atu1281 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atu1281 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Atu1281 PF06455 Atu1281 Atu1282 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atu1282 PF01059 Atu1282 Atu1283 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atu1284 PF02237 Biotin protein ligase C terminal domain Atu1284 PF03099 Biotin/lipoate A/B protein ligase family Atu1285 PF07521 RNA-metabolising metallo-beta-lactamase Atu1285 PF12706 Beta-lactamase superfamily domain Atu1286 PF07330 Atu1286 Atu1288 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Atu1288 PF03129 Anticodon binding domain Atu1289 PF02687 Atu1289 Atu1289 PF12704 MacB-like periplasmic core domain Atu1290 PF00005 ABC transporter Atu1292 PF02811 PHP domain Atu1292 PF07733 Bacterial DNA polymerase III alpha subunit Atu1292 PF14579 Helix-hairpin-helix motif Atu1293 PF01471 Putative peptidoglycan binding domain Atu1293 PF03734 L,D-transpeptidase catalytic domain Atu1294 PF00817 impB/mucB/samB family Atu1294 PF11799 impB/mucB/samB family C-terminal domain Atu1296 PF00072 Response regulator receiver domain Atu1297 PF00072 Response regulator receiver domain Atu1297 PF00990 GGDEF domain Atu1299 PF00471 Ribosomal protein L33 Atu1300 PF07690 Major Facilitator Superfamily Atu1301 PF00293 NUDIX domain Atu1302 PF06170 Atu1302 Atu1303 PF00575 S1 RNA binding domain Atu1303 PF00773 RNB domain Atu1304 PF01131 DNA topoisomerase Atu1304 PF01396 Atu1304 Atu1304 PF01751 Toprim domain Atu1304 PF13368 Atu1304 Atu1305 PF02481 DNA recombination-mediator protein A Atu1306 PF02660 Atu1306 Atu1307 PF01979 Amidohydrolase family Atu1308 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Atu1308 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Atu1310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu1310 PF02770 Acyl-CoA dehydrogenase, middle domain Atu1311 PF00583 Acetyltransferase (GNAT) family Atu1312 PF03693 Uncharacterised protein family (UPF0156) Atu1314 PF00440 Bacterial regulatory proteins, tetR family Atu1316 PF03652 Uncharacterised protein family (UPF0081) Atu1317 PF13483 Beta-lactamase superfamily domain Atu1318 PF02686 Glu-tRNAGln amidotransferase C subunit Atu1319 PF01425 Amidase Atu1320 PF00583 Acetyltransferase (GNAT) family Atu1321 PF09857 Atu1321 Atu1322 PF00583 Acetyltransferase (GNAT) family Atu1323 PF06961 Atu1323 Atu1324 PF02637 GatB domain Atu1324 PF02934 GatB/GatE catalytic domain Atu1325 PF13673 Acetyltransferase (GNAT) domain Atu1326 PF00583 Acetyltransferase (GNAT) family Atu1327 PF05071 Atu1327 Atu1328 PF09923 Atu1328 Atu1329 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Atu1330 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Atu1330 PF02785 Biotin carboxylase C-terminal domain Atu1330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atu1331 PF00364 Biotin-requiring enzyme Atu1332 PF01220 Dehydroquinase class II Atu1333 PF01323 DSBA-like thioredoxin domain Atu1334 PF00155 Aminotransferase class I and II Atu1335 PF12840 Helix-turn-helix domain Atu1336 PF07978 NIPSNAP Atu1337 PF03992 Antibiotic biosynthesis monooxygenase Atu1338 PF13561 Enoyl-(Acyl carrier protein) reductase Atu1339 PF10150 Ribonuclease E/G family Atu1340 PF01520 N-acetylmuramoyl-L-alanine amidase Atu1340 PF11741 AMIN domain Atu1341 PF00905 Penicillin binding protein transpeptidase domain Atu1341 PF00912 Transglycosylase Atu1341 PF17092 Atu1341 Atu1342 PF00472 RF-1 domain Atu1342 PF03462 PCRF domain Atu1343 PF00857 Isochorismatase family Atu1345 PF01513 ATP-NAD kinase Atu1346 PF02567 Phenazine biosynthesis-like protein Atu1347 PF00009 Elongation factor Tu GTP binding domain Atu1347 PF00679 Elongation factor G C-terminus Atu1347 PF03764 Elongation factor G, domain IV Atu1347 PF14492 Elongation Factor G, domain II Atu1348 PF01442 Apolipoprotein A1/A4/E domain Atu1349 PF01627 Hpt domain Atu1350 PF00111 2Fe-2S iron-sulfur cluster binding domain Atu1351 PF06037 Atu1351 Atu1352 PF00809 Pterin binding enzyme Atu1353 PF02152 Dihydroneopterin aldolase Atu1354 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Atu1356 PF05128 Atu1356 Atu1357 PF04317 Atu1357 Atu1358 PF00300 Histidine phosphatase superfamily (branch 1) Atu1359 PF01258 Prokaryotic dksA/traR C4-type zinc finger Atu1360 PF04347 Atu1360 Atu1362 PF00072 Response regulator receiver domain Atu1362 PF00989 PAS fold Atu1362 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1362 PF08448 PAS fold Atu1363 PF02617 ATP-dependent Clp protease adaptor protein ClpS Atu1364 PF00004 ATPase family associated with various cellular activities (AAA) Atu1364 PF02861 Clp amino terminal domain Atu1364 PF07724 AAA domain (Cdc48 subfamily) Atu1364 PF10431 C-terminal, D2-small domain, of ClpB protein Atu1366 PF05437 Atu1366 Atu1367 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu1367 PF03466 LysR substrate binding domain Atu1368 PF09347 Domain of unknown function (DUF1989) Atu1369 PF01230 HIT domain Atu1370 PF04339 Atu1370 Atu1371 PF03009 Glycerophosphoryl diester phosphodiesterase family Atu1372 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease Atu1373 PF08904 Atu1373 Atu1374 PF00318 Ribosomal protein S2 Atu1375 PF00889 Elongation factor TS Atu1376 PF00696 Amino acid kinase family Atu1377 PF01765 Ribosome recycling factor Atu1378 PF01255 Putative undecaprenyl diphosphate synthase Atu1379 PF01148 Cytidylyltransferase family Atu1380 PF02163 Peptidase family M50 Atu1380 PF13180 PDZ domain Atu1381 PF01103 Surface antigen Atu1381 PF07244 Surface antigen variable number repeat Atu1382 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1382 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Atu1383 PF07977 FabA-like domain Atu1384 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1384 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Atu1385 PF06230 Protein of unknown function (DUF1009) Atu1386 PF02684 Atu1386 Atu1387 PF00392 Bacterial regulatory proteins, gntR family Atu1387 PF07729 FCD domain Atu1388 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu1389 PF00528 Binding-protein-dependent transport system inner membrane component Atu1390 PF00528 Binding-protein-dependent transport system inner membrane component Atu1391 PF00005 ABC transporter Atu1392 PF00285 Citrate synthase Atu1393 PF03772 Atu1393 Atu1393 PF13567 Atu1393 Atu1394 PF13410 Glutathione S-transferase, C-terminal domain Atu1394 PF13417 Glutathione S-transferase, N-terminal domain Atu1395 PF00717 Peptidase S24-like Atu1395 PF01726 LexA DNA binding domain Atu1396 PF00005 ABC transporter Atu1397 PF00528 Binding-protein-dependent transport system inner membrane component Atu1398 PF00528 Binding-protein-dependent transport system inner membrane component Atu1399 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu1400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atu1401 PF00005 ABC transporter Atu1401 PF08402 TOBE domain Atu1402 PF00528 Binding-protein-dependent transport system inner membrane component Atu1403 PF00528 Binding-protein-dependent transport system inner membrane component Atu1404 PF01547 Bacterial extracellular solute-binding protein Atu1405 PF00392 Bacterial regulatory proteins, gntR family Atu1405 PF07729 FCD domain Atu1406 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu1406 PF13378 Enolase C-terminal domain-like Atu1407 PF13561 Enoyl-(Acyl carrier protein) reductase Atu1408 PF00107 Zinc-binding dehydrogenase Atu1408 PF08240 Alcohol dehydrogenase GroES-like domain Atu1409 PF04115 Ureidoglycolate hydrolase Atu1410 PF00005 ABC transporter Atu1411 PF00005 ABC transporter Atu1411 PF02653 Atu1411 Atu1411 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu1412 PF02653 Atu1412 Atu1413 PF13458 Periplasmic binding protein Atu1414 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu1414 PF02770 Acyl-CoA dehydrogenase, middle domain Atu1414 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu1415 PF00106 short chain dehydrogenase Atu1416 PF00501 AMP-binding enzyme Atu1417 PF00378 Enoyl-CoA hydratase/isomerase family Atu1419 PF00392 Bacterial regulatory proteins, gntR family Atu1419 PF07729 FCD domain Atu1420 PF01571 Aminomethyltransferase folate-binding domain Atu1420 PF08669 Glycine cleavage T-protein C-terminal barrel domain Atu1421 PF04909 Amidohydrolase Atu1422 PF01047 MarR family Atu1423 PF13468 Glyoxalase-like domain Atu1424 PF00793 DAHP synthetase I family Atu1426 PF00113 Enolase, C-terminal TIM barrel domain Atu1426 PF03952 Enolase, N-terminal domain Atu1428 PF04977 Septum formation initiator Atu1429 PF00676 Dehydrogenase E1 component Atu1430 PF00364 Biotin-requiring enzyme Atu1430 PF02779 Transketolase, pyrimidine binding domain Atu1430 PF02780 Transketolase, C-terminal domain Atu1432 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Atu1432 PF02817 e3 binding domain Atu1433 PF13472 GDSL-like Lipase/Acylhydrolase family Atu1434 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atu1434 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu1435 PF04226 Atu1435 Atu1436 PF04055 Radical SAM superfamily Atu1436 PF16881 Atu1436 Atu1437 PF00892 EamA-like transporter family Atu1438 PF12833 Helix-turn-helix domain Atu1441 PF03364 Polyketide cyclase / dehydrase and lipid transport Atu1442 PF02464 Competence-damaged protein Atu1443 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Atu1443 PF02542 YgbB family Atu1444 PF01207 Dihydrouridine synthase (Dus) Atu1445 PF00512 His Kinase A (phospho-acceptor) domain Atu1445 PF00989 PAS fold Atu1445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1446 PF00072 Response regulator receiver domain Atu1446 PF00158 Sigma-54 interaction domain Atu1446 PF02954 Bacterial regulatory protein, Fis family Atu1447 PF00512 His Kinase A (phospho-acceptor) domain Atu1447 PF00672 HAMP domain Atu1447 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1447 PF08448 PAS fold Atu1448 PF00072 Response regulator receiver domain Atu1448 PF00158 Sigma-54 interaction domain Atu1448 PF02954 Bacterial regulatory protein, Fis family Atu1449 PF02080 TrkA-C domain Atu1449 PF02254 TrkA-N domain Atu1451 PF01926 50S ribosome-binding GTPase Atu1451 PF13167 Atu1451 Atu1451 PF16360 Atu1451 Atu1452 PF03819 MazG nucleotide pyrophosphohydrolase domain Atu1453 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Atu1454 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu1454 PF10414 Sirohaem synthase dimerisation region Atu1454 PF13241 Putative NAD(P)-binding Atu1455 PF11011 Atu1455 Atu1456 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Atu1456 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Atu1457 PF06073 Atu1457 Atu1458 PF00175 Oxidoreductase NAD-binding domain Atu1458 PF00970 Oxidoreductase FAD-binding domain Atu1459 PF12832 MFS_1 like family Atu1461 PF03372 Endonuclease/Exonuclease/phosphatase family Atu1462 PF02347 Glycine cleavage system P-protein Atu1463 PF01597 Glycine cleavage H-protein Atu1464 PF01571 Aminomethyltransferase folate-binding domain Atu1464 PF08669 Glycine cleavage T-protein C-terminal barrel domain Atu1468 PF04314 Protein of unknown function (DUF461) Atu1468 PF07987 Domain of unkown function (DUF1775) Atu1470 PF02537 Atu1470 Atu1471 PF00849 RNA pseudouridylate synthase Atu1472 PF13419 Haloacid dehalogenase-like hydrolase Atu1473 PF07542 ATP12 chaperone protein Atu1475 PF01042 Endoribonuclease L-PSP Atu1476 PF00756 Putative esterase Atu1477 PF07077 Atu1477 Atu1478 PF02639 Atu1478 Atu1480 PF00578 AhpC/TSA family Atu1480 PF10417 C-terminal domain of 1-Cys peroxiredoxin Atu1482 PF06353 Atu1482 Atu1483 PF01292 Prokaryotic cytochrome b561 Atu1485 PF04542 Sigma-70 region 2 Atu1485 PF08281 Sigma-70, region 4 Atu1486 PF03640 Atu1486 Atu1487 PF04264 YceI-like domain Atu1488 PF00665 Integrase core domain Atu1488 PF13936 Helix-turn-helix domain Atu1489 PF03358 NADPH-dependent FMN reductase Atu1490 PF03960 ArsC family Atu1491 PF01758 Sodium Bile acid symporter family Atu1492 PF12840 Helix-turn-helix domain Atu1493 PF00654 Voltage gated chloride channel Atu1494 PF12706 Beta-lactamase superfamily domain Atu1495 PF01026 TatD related DNase Atu1496 PF08264 Anticodon-binding domain of tRNA Atu1496 PF09334 tRNA synthetases class I (M) Atu1497 PF13177 DNA polymerase III, delta subunit Atu1498 PF02223 Thymidylate kinase Atu1499 PF00768 D-alanyl-D-alanine carboxypeptidase Atu1499 PF07943 Penicillin-binding protein 5, C-terminal domain Atu1500 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel Atu1505 PF00768 D-alanyl-D-alanine carboxypeptidase Atu1505 PF05036 Sporulation related domain Atu1507 PF00521 DNA gyrase/topoisomerase IV, subunit A Atu1507 PF03989 DNA gyrase C-terminal domain, beta-propeller Atu1508 PF01914 Atu1508 Atu1509 PF00571 CBS domain Atu1509 PF04982 Atu1509 Atu1510 PF05016 Plasmid stabilisation system protein Atu1511 PF03693 Uncharacterised protein family (UPF0156) Atu1512 PF00436 Single-strand binding protein family Atu1513 PF00005 ABC transporter Atu1513 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu1514 PF01904 Protein of unknown function DUF72 Atu1515 PF01207 Dihydrouridine synthase (Dus) Atu1516 PF01557 Fumarylacetoacetate (FAA) hydrolase family Atu1517 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1518 PF01475 Ferric uptake regulator family Atu1519 PF00950 Atu1519 Atu1520 PF00005 ABC transporter Atu1521 PF01297 Periplasmic solute binding protein family Atu1522 PF00356 Bacterial regulatory proteins, lacI family Atu1522 PF13377 Periplasmic binding protein-like domain Atu1523 PF00703 Glycosyl hydrolases family 2 Atu1524 PF00248 Aldo/keto reductase family Atu1525 PF11776 Domain of unknown function (DUF3315) Atu1526 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Atu1526 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Atu1527 PF03597 Atu1527 Atu1528 PF00122 E1-E2 ATPase Atu1528 PF00403 Heavy-metal-associated domain Atu1528 PF00702 haloacid dehalogenase-like hydrolase Atu1529 PF05751 Atu1529 Atu1530 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Atu1530 PF12801 Atu1530 Atu1530 PF13746 4Fe-4S dicluster domain Atu1532 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu1533 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu1534 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Atu1534 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Atu1535 PF05545 Atu1535 Atu1536 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO Atu1537 PF00115 Cytochrome C and Quinol oxidase polypeptide I Atu1539 PF00916 Atu1539 Atu1539 PF01740 STAS domain Atu1540 PF08857 Putative ParB-like nuclease Atu1541 PF00924 Mechanosensitive ion channel Atu1542 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Atu1544 PF04654 Atu1544 Atu1545 PF07786 Atu1545 Atu1546 PF13411 MerR HTH family regulatory protein Atu1547 PF00571 CBS domain Atu1547 PF01769 Divalent cation transporter Atu1547 PF03448 MgtE intracellular N domain Atu1548 PF00384 Molybdopterin oxidoreductase Atu1548 PF01568 Molydopterin dinucleotide binding domain Atu1550 PF01327 Polypeptide deformylase Atu1551 PF02566 OsmC-like protein Atu1553 PF08447 PAS fold Atu1556 PF03099 Biotin/lipoate A/B protein ligase family Atu1557 PF00107 Zinc-binding dehydrogenase Atu1557 PF08240 Alcohol dehydrogenase GroES-like domain Atu1558 PF00892 EamA-like transporter family Atu1560 PF00494 Squalene/phytoene synthase Atu1561 PF04430 Protein of unknown function (DUF498/DUF598) Atu1562 PF02355 Protein export membrane protein Atu1562 PF07549 SecD/SecF GG Motif Atu1563 PF02699 Preprotein translocase subunit Atu1564 PF05673 Protein of unknown function (DUF815) Atu1565 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1567 PF00107 Zinc-binding dehydrogenase Atu1567 PF08240 Alcohol dehydrogenase GroES-like domain Atu1568 PF00440 Bacterial regulatory proteins, tetR family Atu1568 PF13972 Bacterial transcriptional repressor Atu1569 PF00067 Cytochrome P450 Atu1570 PF11324 Atu1570 Atu1571 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1571 PF06426 Serine acetyltransferase, N-terminal Atu1572 PF00561 alpha/beta hydrolase fold Atu1573 PF10276 Zinc-finger domain Atu1574 PF01494 FAD binding domain Atu1575 PF01053 Cys/Met metabolism PLP-dependent enzyme Atu1577 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu1578 PF00528 Binding-protein-dependent transport system inner membrane component Atu1579 PF00528 Binding-protein-dependent transport system inner membrane component Atu1580 PF00005 ABC transporter Atu1586 PF01368 DHH family Atu1586 PF02272 DHHA1 domain Atu1588 PF00742 Homoserine dehydrogenase Atu1588 PF01842 ACT domain Atu1588 PF03447 Homoserine dehydrogenase, NAD binding domain Atu1589 PF00155 Aminotransferase class I and II Atu1590 PF01156 Inosine-uridine preferring nucleoside hydrolase Atu1591 PF01925 Atu1591 Atu1594 PF03279 Atu1594 Atu1595 PF00107 Zinc-binding dehydrogenase Atu1595 PF08240 Alcohol dehydrogenase GroES-like domain Atu1596 PF00109 Beta-ketoacyl synthase, N-terminal domain Atu1596 PF02801 Beta-ketoacyl synthase, C-terminal domain Atu1597 PF00109 Beta-ketoacyl synthase, N-terminal domain Atu1599 PF07977 FabA-like domain Atu1600 PF00550 Phosphopantetheine attachment site Atu1601 PF04055 Radical SAM superfamily Atu1602 PF00027 Cyclic nucleotide-binding domain Atu1602 PF13545 Crp-like helix-turn-helix domain Atu1604 PF07167 Atu1604 Atu1605 PF03749 Sugar fermentation stimulation protein Atu1606 PF00557 Metallopeptidase family M24 Atu1607 PF04002 RadC-like JAB domain Atu1608 PF07811 Atu1608 Atu1609 PF09977 Atu1609 Atu1610 PF01474 Class-II DAHP synthetase family Atu1611 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atu1611 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu1613 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Atu1614 PF13419 Haloacid dehalogenase-like hydrolase Atu1615 PF01471 Putative peptidoglycan binding domain Atu1615 PF03734 L,D-transpeptidase catalytic domain Atu1616 PF00206 Lyase Atu1616 PF10415 Fumarase C C-terminus Atu1617 PF07859 alpha/beta hydrolase fold Atu1618 PF00117 Glutamine amidotransferase class-I Atu1618 PF06418 CTP synthase N-terminus Atu1619 PF03840 Preprotein translocase SecG subunit Atu1620 PF00121 Triosephosphate isomerase Atu1621 PF01738 Dienelactone hydrolase family Atu1622 PF00204 DNA gyrase B Atu1622 PF00986 DNA gyrase B subunit, carboxyl terminus Atu1622 PF01751 Toprim domain Atu1622 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1623 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu1624 PF00440 Bacterial regulatory proteins, tetR family Atu1624 PF14246 AefR-like transcriptional repressor, C-terminal region Atu1625 PF08241 Methyltransferase domain Atu1626 PF01370 NAD dependent epimerase/dehydratase family Atu1627 PF00574 Clp protease Atu1629 PF12840 Helix-turn-helix domain Atu1630 PF13091 PLD-like domain Atu1631 PF00072 Response regulator receiver domain Atu1632 PF01266 FAD dependent oxidoreductase Atu1632 PF01571 Aminomethyltransferase folate-binding domain Atu1632 PF08669 Glycine cleavage T-protein C-terminal barrel domain Atu1632 PF16350 Atu1632 Atu1633 PF00924 Mechanosensitive ion channel Atu1634 PF04226 Atu1634 Atu1643 PF05232 Atu1643 Atu1644 PF03886 Protein of unknown function (DUF330) Atu1645 PF02470 Atu1645 Atu1646 PF00005 ABC transporter Atu1647 PF02405 Atu1647 Atu1647 PF13466 STAS domain Atu1648 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu1648 PF13378 Enolase C-terminal domain-like Atu1649 PF12850 Calcineurin-like phosphoesterase superfamily domain Atu1650 PF01757 Atu1650 Atu1652 PF00390 Malic enzyme, N-terminal domain Atu1652 PF01515 Phosphate acetyl/butaryl transferase Atu1652 PF03949 Malic enzyme, NAD binding domain Atu1653 PF11064 Atu1653 Atu1654 PF00881 Nitroreductase family Atu1656 PF07676 WD40-like Beta Propeller Repeat Atu1657 PF00795 Carbon-nitrogen hydrolase Atu1657 PF02540 NAD synthase Atu1658 PF00884 Sulfatase Atu1659 PF06210 Atu1659 Atu1661 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atu1661 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu1663 PF00795 Carbon-nitrogen hydrolase Atu1664 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Atu1664 PF05697 Bacterial trigger factor protein (TF) Atu1664 PF05698 Bacterial trigger factor protein (TF) C-terminus Atu1667 PF06568 Atu1667 Atu1669 PF01134 Glucose inhibited division protein A Atu1670 PF00107 Zinc-binding dehydrogenase Atu1670 PF08240 Alcohol dehydrogenase GroES-like domain Atu1672 PF00501 AMP-binding enzyme Atu1672 PF13193 AMP-binding enzyme C-terminal domain Atu1673 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Atu1673 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Atu1675 PF00196 Bacterial regulatory proteins, luxR family Atu1676 PF00425 chorismate binding enzyme Atu1677 PF01702 Queuine tRNA-ribosyltransferase Atu1678 PF02547 Queuosine biosynthesis protein Atu1679 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Atu1680 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Atu1681 PF01467 Cytidylyltransferase Atu1686 PF13145 PPIC-type PPIASE domain Atu1686 PF13624 SurA N-terminal domain Atu1687 PF00591 Glycosyl transferase family, a/b domain Atu1687 PF02885 Glycosyl transferase family, helical bundle domain Atu1688 PF00218 Indole-3-glycerol phosphate synthase Atu1689 PF01967 MoaC family Atu1690 PF00994 Probable molybdopterin binding domain Atu1690 PF03453 MoeA N-terminal region (domain I and II) Atu1690 PF03454 MoeA C-terminal region (domain IV) Atu1691 PF00990 GGDEF domain Atu1692 PF01243 Pyridoxamine 5'-phosphate oxidase Atu1693 PF00999 Sodium/hydrogen exchanger family Atu1693 PF02254 TrkA-N domain Atu1694 PF06155 Protein of unknown function (DUF971) Atu1695 PF04055 Radical SAM superfamily Atu1695 PF06463 Molybdenum Cofactor Synthesis C Atu1695 PF13353 4Fe-4S single cluster domain Atu1696 PF00892 EamA-like transporter family Atu1697 PF07690 Major Facilitator Superfamily Atu1698 PF12804 MobA-like NTP transferase domain Atu1699 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Atu1700 PF01476 LysM domain Atu1700 PF01551 Peptidase family M23 Atu1701 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Atu1702 PF01975 Survival protein SurE Atu1703 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Atu1703 PF02403 Seryl-tRNA synthetase N-terminal domain Atu1704 PF00902 Sec-independent protein translocase protein (TatC) Atu1705 PF02416 mttA/Hcf106 family Atu1706 PF02416 mttA/Hcf106 family Atu1707 PF04079 Putative transcriptional regulators (Ypuh-like) Atu1708 PF02616 ScpA/B protein Atu1709 PF00933 Glycosyl hydrolase family 3 N terminal domain Atu1710 PF05036 Sporulation related domain Atu1711 PF00750 tRNA synthetases class I (R) Atu1711 PF03485 Arginyl tRNA synthetase N terminal domain Atu1711 PF05746 DALR anticodon binding domain Atu1712 PF01966 HD domain Atu1712 PF13286 Phosphohydrolase-associated domain Atu1713 PF01521 Iron-sulphur cluster biosynthesis Atu1714 PF03372 Endonuclease/Exonuclease/phosphatase family Atu1715 PF08238 Sel1 repeat Atu1717 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Atu1719 PF00133 tRNA synthetases class I (I, L, M and V) Atu1719 PF08264 Anticodon-binding domain of tRNA Atu1719 PF10458 Valyl tRNA synthetase tRNA binding arm Atu1720 PF10691 Atu1720 Atu1721 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Atu1728 PF03358 NADPH-dependent FMN reductase Atu1729 PF00994 Probable molybdopterin binding domain Atu1730 PF00582 Universal stress protein family Atu1731 PF00156 Phosphoribosyl transferase domain Atu1733 PF02867 Ribonucleotide reductase, barrel domain Atu1733 PF08471 Atu1733 Atu1735 PF01381 Helix-turn-helix Atu1736 PF01566 Atu1736 Atu1738 PF00005 ABC transporter Atu1738 PF00664 ABC transporter transmembrane region Atu1739 PF01594 Atu1739 Atu1740 PF13508 Acetyltransferase (GNAT) domain Atu1742 PF10098 Atu1742 Atu1743 PF01613 Flavin reductase like domain Atu1744 PF00881 Nitroreductase family Atu1746 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Atu1746 PF02824 TGS domain Atu1746 PF03129 Anticodon binding domain Atu1746 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Atu1747 PF01809 Atu1747 Atu1748 PF01592 NifU-like N terminal domain Atu1749 PF01227 GTP cyclohydrolase I Atu1750 PF01502 Phosphoribosyl-AMP cyclohydrolase Atu1751 PF01734 Patatin-like phospholipase Atu1752 PF00571 CBS domain Atu1753 PF01694 Rhomboid family Atu1754 PF07310 Atu1754 Atu1757 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP Atu1758 PF07370 Atu1758 Atu1759 PF03313 Atu1759 Atu1759 PF03315 Serine dehydratase beta chain Atu1762 PF09992 Predicted periplasmic protein (DUF2233) Atu1763 PF00551 Formyl transferase Atu1764 PF02219 Methylenetetrahydrofolate reductase Atu1765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu1765 PF03466 LysR substrate binding domain Atu1767 PF01965 DJ-1/PfpI family Atu1767 PF12833 Helix-turn-helix domain Atu1768 PF01256 Carbohydrate kinase Atu1768 PF03853 YjeF-related protein N-terminus Atu1769 PF00543 Nitrogen regulatory protein P-II Atu1770 PF00120 Glutamine synthetase, catalytic domain Atu1770 PF03951 Glutamine synthetase, beta-Grasp domain Atu1771 PF00892 EamA-like transporter family Atu1773 PF06776 Invasion associated locus B (IalB) protein Atu1774 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu1775 PF01323 DSBA-like thioredoxin domain Atu1776 PF00892 EamA-like transporter family Atu1778 PF00270 DEAD/DEAH box helicase Atu1778 PF00271 Helicase conserved C-terminal domain Atu1778 PF02559 CarD-like/TRCF domain Atu1778 PF03461 TRCF domain Atu1779 PF03937 Flavinator of succinate dehydrogenase Atu1780 PF00270 DEAD/DEAH box helicase Atu1780 PF00271 Helicase conserved C-terminal domain Atu1780 PF17191 Atu1780 Atu1782 PF05016 Plasmid stabilisation system protein Atu1783 PF01402 Ribbon-helix-helix protein, copG family Atu1784 PF04367 Atu1784 Atu1785 PF13508 Acetyltransferase (GNAT) domain Atu1786 PF01380 SIS domain Atu1786 PF13522 Glutamine amidotransferase domain Atu1787 PF00132 Bacterial transferase hexapeptide (six repeats) Atu1787 PF12804 MobA-like NTP transferase domain Atu1787 PF14602 Hexapeptide repeat of succinyl-transferase Atu1788 PF00392 Bacterial regulatory proteins, gntR family Atu1788 PF07729 FCD domain Atu1789 PF02608 Basic membrane protein Atu1790 PF02653 Atu1790 Atu1791 PF02653 Atu1791 Atu1792 PF00005 ABC transporter Atu1793 PF01066 CDP-alcohol phosphatidyltransferase Atu1794 PF01494 FAD binding domain Atu1795 PF03547 Atu1795 Atu1796 PF02683 Atu1796 Atu1798 PF12796 Ankyrin repeats (3 copies) Atu1799 PF01755 Atu1799 Atu1800 PF08291 Peptidase M15 Atu1802 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu1803 PF00313 'Cold-shock' DNA-binding domain Atu1804 PF02643 Uncharacterized ACR, COG1430 Atu1805 PF04972 BON domain Atu1808 PF13506 Glycosyl transferase family 21 Atu1810 PF04800 ETC complex I subunit conserved region Atu1813 PF02082 Transcriptional regulator Atu1814 PF00561 alpha/beta hydrolase fold Atu1815 PF16576 Atu1815 Atu1816 PF00005 ABC transporter Atu1817 PF02687 Atu1817 Atu1817 PF12704 MacB-like periplasmic core domain Atu1819 PF01521 Iron-sulphur cluster biosynthesis Atu1820 PF01883 Domain of unknown function DUF59 Atu1821 PF00266 Aminotransferase class-V Atu1822 PF01458 Uncharacterized protein family (UPF0051) Atu1823 PF00005 ABC transporter Atu1824 PF01458 Uncharacterized protein family (UPF0051) Atu1825 PF00266 Aminotransferase class-V Atu1826 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Atu1827 PF03702 Uncharacterised protein family (UPF0075) Atu1828 PF00579 tRNA synthetases class I (W and Y) Atu1830 PF00578 AhpC/TSA family Atu1831 PF04305 Atu1831 Atu1832 PF01551 Peptidase family M23 Atu1833 PF00270 DEAD/DEAH box helicase Atu1833 PF00271 Helicase conserved C-terminal domain Atu1834 PF00293 NUDIX domain Atu1837 PF12844 Helix-turn-helix domain Atu1838 PF13458 Periplasmic binding protein Atu1839 PF00834 Ribulose-phosphate 3 epimerase family Atu1841 PF00206 Lyase Atu1841 PF10397 Adenylosuccinate lyase C-terminus Atu1842 PF06821 Serine hydrolase Atu1843 PF01259 SAICAR synthetase Atu1844 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Atu1845 PF13507 CobB/CobQ-like glutamine amidotransferase domain Atu1847 PF06568 Atu1847 Atu1848 PF00155 Aminotransferase class I and II Atu1848 PF00392 Bacterial regulatory proteins, gntR family Atu1849 PF09411 Lipid A 3-O-deacylase (PagL) Atu1850 PF00586 AIR synthase related protein, N-terminal domain Atu1850 PF02769 AIR synthase related protein, C-terminal domain Atu1851 PF01722 BolA-like protein Atu1854 PF00462 Glutaredoxin Atu1855 PF07690 Major Facilitator Superfamily Atu1856 PF00459 Inositol monophosphatase family Atu1857 PF00459 Inositol monophosphatase family Atu1858 PF01171 PP-loop family Atu1859 PF04960 Glutaminase Atu1860 PF00163 Ribosomal protein S4/S9 N-terminal domain Atu1860 PF01479 S4 domain Atu1861 PF03741 Atu1861 Atu1862 PF01935 Domain of unknown function DUF87 Atu1863 PF00892 EamA-like transporter family Atu1864 PF01810 Atu1864 Atu1867 PF01177 Asp/Glu/Hydantoin racemase Atu1868 PF00588 SpoU rRNA Methylase family Atu1870 PF00180 Isocitrate/isopropylmalate dehydrogenase Atu1871 PF13417 Glutathione S-transferase, N-terminal domain Atu1872 PF12681 Glyoxalase-like domain Atu1873 PF01411 tRNA synthetases class II (A) Atu1873 PF02272 DHHA1 domain Atu1873 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Atu1874 PF00154 recA bacterial DNA recombination protein Atu1875 PF00294 pfkB family carbohydrate kinase Atu1876 PF04227 Indigoidine synthase A like protein Atu1877 PF00691 OmpA family Atu1879 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu1880 PF00528 Binding-protein-dependent transport system inner membrane component Atu1881 PF00528 Binding-protein-dependent transport system inner membrane component Atu1882 PF06233 Atu1882 Atu1883 PF00515 Tetratricopeptide repeat Atu1883 PF13489 Methyltransferase domain Atu1884 PF13379 NMT1-like family Atu1885 PF01037 AsnC family Atu1885 PF13412 Winged helix-turn-helix DNA-binding Atu1886 PF03167 Uracil DNA glycosylase superfamily Atu1887 PF00565 Staphylococcal nuclease homologue Atu1888 PF00512 His Kinase A (phospho-acceptor) domain Atu1888 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1889 PF01219 Prokaryotic diacylglycerol kinase Atu1890 PF02277 Phosphoribosyltransferase Atu1891 PF02654 Atu1891 Atu1892 PF06945 Atu1892 Atu1893 PF13975 Atu1893 Atu1895 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Atu1897 PF13561 Enoyl-(Acyl carrier protein) reductase Atu1898 PF00005 ABC transporter Atu1899 PF13407 Periplasmic binding protein domain Atu1900 PF02653 Atu1900 Atu1901 PF00456 Transketolase, thiamine diphosphate binding domain Atu1902 PF02779 Transketolase, pyrimidine binding domain Atu1902 PF02780 Transketolase, C-terminal domain Atu1903 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Atu1903 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Atu1904 PF04198 Putative sugar-binding domain Atu1904 PF12802 MarR family Atu1905 PF13561 Enoyl-(Acyl carrier protein) reductase Atu1906 PF01061 Atu1906 Atu1907 PF00005 ABC transporter Atu1908 PF01925 Atu1908 Atu1910 PF06904 Atu1910 Atu1912 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu1912 PF00672 HAMP domain Atu1912 PF17200 Atu1912 Atu1913 PF08980 Domain of unknown function (DUF1883) Atu1914 PF00004 ATPase family associated with various cellular activities (AAA) Atu1914 PF12002 MgsA AAA+ ATPase C terminal Atu1914 PF16193 Atu1914 Atu1915 PF13180 PDZ domain Atu1915 PF13365 Trypsin-like peptidase domain Atu1917 PF00144 Beta-lactamase Atu1918 PF00920 Dehydratase family Atu1919 PF00174 Oxidoreductase molybdopterin binding domain Atu1920 PF01794 Atu1920 Atu1921 PF05675 Atu1921 Atu1922 PF01196 Ribosomal protein L17 Atu1923 PF01000 RNA polymerase Rpb3/RpoA insert domain Atu1923 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Atu1923 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Atu1924 PF00411 Ribosomal protein S11 Atu1925 PF00416 Ribosomal protein S13/S18 Atu1926 PF00406 Adenylate kinase Atu1927 PF00344 SecY translocase Atu1928 PF00828 Ribosomal protein L18e/L15 Atu1929 PF00333 Ribosomal protein S5, N-terminal domain Atu1929 PF03719 Ribosomal protein S5, C-terminal domain Atu1930 PF00861 Ribosomal L18p/L5e family Atu1931 PF00347 Ribosomal protein L6 Atu1932 PF00410 Ribosomal protein S8 Atu1933 PF00253 Ribosomal protein S14p/S29e Atu1934 PF00281 Ribosomal protein L5 Atu1934 PF00673 ribosomal L5P family C-terminus Atu1935 PF00467 KOW motif Atu1935 PF17136 Atu1935 Atu1936 PF00238 Ribosomal protein L14p/L23e Atu1937 PF00366 Ribosomal protein S17 Atu1938 PF00831 Ribosomal L29 protein Atu1939 PF00252 Ribosomal protein L16p/L10e Atu1940 PF00189 Ribosomal protein S3, C-terminal domain Atu1940 PF07650 KH domain Atu1941 PF00237 Ribosomal protein L22p/L17e Atu1942 PF00203 Ribosomal protein S19 Atu1943 PF00181 Ribosomal Proteins L2, RNA binding domain Atu1943 PF03947 Ribosomal Proteins L2, C-terminal domain Atu1944 PF00276 Ribosomal protein L23 Atu1945 PF00573 Ribosomal protein L4/L1 family Atu1946 PF00297 Ribosomal protein L3 Atu1947 PF00338 Ribosomal protein S10p/S20e Atu1948 PF00009 Elongation factor Tu GTP binding domain Atu1948 PF03143 Elongation factor Tu C-terminal domain Atu1948 PF03144 Elongation factor Tu domain 2 Atu1949 PF00009 Elongation factor Tu GTP binding domain Atu1949 PF00679 Elongation factor G C-terminus Atu1949 PF03144 Elongation factor Tu domain 2 Atu1949 PF03764 Elongation factor G, domain IV Atu1949 PF14492 Elongation Factor G, domain II Atu1950 PF00177 Ribosomal protein S7p/S5e Atu1951 PF00164 Ribosomal protein S12/S23 Atu1953 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu1954 PF00196 Bacterial regulatory proteins, luxR family Atu1955 PF00623 RNA polymerase Rpb1, domain 2 Atu1955 PF04983 RNA polymerase Rpb1, domain 3 Atu1955 PF04997 RNA polymerase Rpb1, domain 1 Atu1955 PF04998 RNA polymerase Rpb1, domain 5 Atu1955 PF05000 RNA polymerase Rpb1, domain 4 Atu1956 PF00562 RNA polymerase Rpb2, domain 6 Atu1956 PF04560 RNA polymerase Rpb2, domain 7 Atu1956 PF04561 RNA polymerase Rpb2, domain 2 Atu1956 PF04563 RNA polymerase beta subunit Atu1956 PF04565 RNA polymerase Rpb2, domain 3 Atu1956 PF10385 RNA polymerase beta subunit external 1 domain Atu1957 PF00542 Ribosomal protein L7/L12 C-terminal domain Atu1957 PF16320 Atu1957 Atu1958 PF00466 Ribosomal protein L10 Atu1959 PF00687 Ribosomal protein L1p/L10e family Atu1960 PF00298 Ribosomal protein L11, RNA binding domain Atu1960 PF03946 Ribosomal protein L11, N-terminal domain Atu1961 PF00467 KOW motif Atu1961 PF02357 Transcription termination factor nusG Atu1962 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Atu1965 PF01370 NAD dependent epimerase/dehydratase family Atu1966 PF00009 Elongation factor Tu GTP binding domain Atu1966 PF03143 Elongation factor Tu C-terminal domain Atu1966 PF03144 Elongation factor Tu domain 2 Atu1967 PF03741 Atu1967 Atu1969 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme Atu1972 PF07886 Atu1972 Atu1974 PF02353 Mycolic acid cyclopropane synthetase Atu1975 PF06966 Atu1975 Atu1977 PF01593 Flavin containing amine oxidoreductase Atu1978 PF07103 Atu1978 Atu1979 PF02353 Mycolic acid cyclopropane synthetase Atu1980 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) Atu1981 PF09945 Atu1981 Atu1982 PF04542 Sigma-70 region 2 Atu1982 PF08281 Sigma-70, region 4 Atu1983 PF10099 Atu1983 Atu1984 PF00072 Response regulator receiver domain Atu1984 PF07568 Atu1984 Atu1984 PF13581 Histidine kinase-like ATPase domain Atu1985 PF00072 Response regulator receiver domain Atu1986 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1986 PF05227 CHASE3 domain Atu1987 PF00072 Response regulator receiver domain Atu1988 PF00072 Response regulator receiver domain Atu1988 PF07536 Atu1988 Atu1989 PF00072 Response regulator receiver domain Atu1990 PF00360 Phytochrome region Atu1990 PF00512 His Kinase A (phospho-acceptor) domain Atu1990 PF01590 GAF domain Atu1990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu1990 PF08446 PAS fold Atu1993 PF00588 SpoU rRNA Methylase family Atu1993 PF08032 RNA 2'-O ribose methyltransferase substrate binding Atu1994 PF03061 Thioesterase superfamily Atu1997 PF03413 Peptidase propeptide and YPEB domain Atu1997 PF03929 Atu1997 Atu1998 PF12680 SnoaL-like domain Atu1999 PF13460 NADH(P)-binding Atu2000 PF01638 HxlR-like helix-turn-helix Atu2001 PF00271 Helicase conserved C-terminal domain Atu2001 PF02151 UvrB/uvrC motif Atu2001 PF04851 Type III restriction enzyme, res subunit Atu2001 PF12344 Ultra-violet resistance protein B Atu2002 PF00756 Putative esterase Atu2003 PF08818 Domain of unknown function (DU1801) Atu2004 PF05239 PRC-barrel domain Atu2005 PF06037 Atu2005 Atu2006 PF00226 DnaJ domain Atu2010 PF00990 GGDEF domain Atu2011 PF03372 Endonuclease/Exonuclease/phosphatase family Atu2012 PF00005 ABC transporter Atu2012 PF08402 TOBE domain Atu2013 PF00528 Binding-protein-dependent transport system inner membrane component Atu2014 PF13343 Bacterial extracellular solute-binding protein Atu2015 PF00155 Aminotransferase class I and II Atu2016 PF05025 RbsD / FucU transport protein family Atu2017 PF06769 Plasmid encoded toxin Txe Atu2018 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Atu2019 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Atu2019 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain Atu2020 PF00440 Bacterial regulatory proteins, tetR family Atu2021 PF06719 Atu2021 Atu2021 PF12833 Helix-turn-helix domain Atu2022 PF00107 Zinc-binding dehydrogenase Atu2022 PF08240 Alcohol dehydrogenase GroES-like domain Atu2023 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu2024 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Atu2025 PF00196 Bacterial regulatory proteins, luxR family Atu2025 PF13411 MerR HTH family regulatory protein Atu2026 PF13538 UvrD-like helicase C-terminal domain Atu2026 PF13604 AAA domain Atu2028 PF12840 Helix-turn-helix domain Atu2029 PF03640 Atu2029 Atu2030 PF04542 Sigma-70 region 2 Atu2030 PF08281 Sigma-70, region 4 Atu2032 PF00248 Aldo/keto reductase family Atu2033 PF08327 Activator of Hsp90 ATPase homolog 1-like protein Atu2034 PF12840 Helix-turn-helix domain Atu2035 PF01842 ACT domain Atu2035 PF10369 Small subunit of acetolactate synthase Atu2036 PF00205 Thiamine pyrophosphate enzyme, central domain Atu2036 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Atu2036 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Atu2038 PF01935 Domain of unknown function DUF87 Atu2039 PF01715 IPP transferase Atu2040 PF12710 haloacid dehalogenase-like hydrolase Atu2041 PF13302 Acetyltransferase (GNAT) domain Atu2042 PF13561 Enoyl-(Acyl carrier protein) reductase Atu2043 PF13180 PDZ domain Atu2043 PF13365 Trypsin-like peptidase domain Atu2044 PF01145 SPFH domain / Band 7 family Atu2045 PF01145 SPFH domain / Band 7 family Atu2045 PF12221 Atu2045 Atu2046 PF00186 Dihydrofolate reductase Atu2047 PF00303 Thymidylate synthase Atu2051 PF13467 Ribbon-helix-helix domain Atu2052 PF05170 Atu2052 Atu2052 PF13502 Atu2052 Atu2053 PF01565 FAD binding domain Atu2053 PF02913 FAD linked oxidases, C-terminal domain Atu2054 PF00873 AcrB/AcrD/AcrF family Atu2055 PF16576 Atu2055 Atu2056 PF02627 Carboxymuconolactone decarboxylase family Atu2057 PF00580 UvrD/REP helicase N-terminal domain Atu2057 PF13361 UvrD-like helicase C-terminal domain Atu2058 PF01755 Atu2058 Atu2059 PF00440 Bacterial regulatory proteins, tetR family Atu2059 PF13977 Bacterial transcriptional repressor Atu2060 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Atu2061 PF12146 Putative lysophospholipase Atu2062 PF04657 Atu2062 Atu2063 PF04657 Atu2063 Atu2064 PF10908 Atu2064 Atu2066 PF00857 Isochorismatase family Atu2067 PF09932 Atu2067 Atu2068 PF03591 Atu2068 Atu2069 PF05437 Atu2069 Atu2070 PF00557 Metallopeptidase family M24 Atu2070 PF01321 Creatinase/Prolidase N-terminal domain Atu2070 PF16188 Atu2070 Atu2070 PF16189 Atu2070 Atu2072 PF06325 Ribosomal protein L11 methyltransferase (PrmA) Atu2073 PF02630 SCO1/SenC Atu2075 PF01584 CheW-like domain Atu2076 PF05981 Atu2076 Atu2077 PF00929 Exonuclease Atu2078 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2078 PF03466 LysR substrate binding domain Atu2079 PF00892 EamA-like transporter family Atu2080 PF00583 Acetyltransferase (GNAT) family Atu2081 PF01636 Phosphotransferase enzyme family Atu2082 PF00533 BRCA1 C Terminus (BRCT) domain Atu2082 PF01653 NAD-dependent DNA ligase adenylation domain Atu2082 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Atu2082 PF03120 NAD-dependent DNA ligase OB-fold domain Atu2082 PF12826 Helix-hairpin-helix motif Atu2083 PF02463 RecF/RecN/SMC N terminal domain Atu2084 PF13525 Outer membrane lipoprotein Atu2085 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Atu2086 PF00091 Tubulin/FtsZ family, GTPase domain Atu2086 PF12327 FtsZ family, C-terminal domain Atu2087 PF02491 SHS2 domain inserted in FTSA Atu2087 PF14450 Cell division protein FtsA Atu2088 PF03799 Cell division protein FtsQ Atu2088 PF08478 POTRA domain, FtsQ-type Atu2089 PF01820 D-ala D-ala ligase N-terminus Atu2089 PF07478 D-ala D-ala ligase C-terminus Atu2090 PF00083 Sugar (and other) transporter Atu2091 PF00990 GGDEF domain Atu2092 PF01565 FAD binding domain Atu2092 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Atu2093 PF01225 Mur ligase family, catalytic domain Atu2093 PF02875 Mur ligase family, glutamate ligase domain Atu2093 PF08245 Mur ligase middle domain Atu2094 PF03033 Glycosyltransferase family 28 N-terminal domain Atu2094 PF04101 Glycosyltransferase family 28 C-terminal domain Atu2095 PF01098 Atu2095 Atu2096 PF02875 Mur ligase family, glutamate ligase domain Atu2096 PF08245 Mur ligase middle domain Atu2097 PF00953 Glycosyl transferase family 4 Atu2097 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Atu2098 PF01225 Mur ligase family, catalytic domain Atu2098 PF02875 Mur ligase family, glutamate ligase domain Atu2098 PF08245 Mur ligase middle domain Atu2099 PF01225 Mur ligase family, catalytic domain Atu2099 PF02875 Mur ligase family, glutamate ligase domain Atu2099 PF08245 Mur ligase middle domain Atu2100 PF00905 Penicillin binding protein transpeptidase domain Atu2100 PF03717 Penicillin-binding Protein dimerisation domain Atu2102 PF01795 MraW methylase family Atu2103 PF02381 MraZ protein Atu2104 PF03994 Atu2104 Atu2105 PF06693 Atu2105 Atu2106 PF03738 Glutathionylspermidine synthase preATP-grasp Atu2107 PF00665 Integrase core domain Atu2107 PF01527 Transposase Atu2107 PF13276 Atu2107 Atu2108 PF03738 Glutathionylspermidine synthase preATP-grasp Atu2110 PF01266 FAD dependent oxidoreductase Atu2111 PF01266 FAD dependent oxidoreductase Atu2112 PF01464 Transglycosylase SLT domain Atu2113 PF01471 Putative peptidoglycan binding domain Atu2113 PF01510 N-acetylmuramoyl-L-alanine amidase Atu2114 PF00226 DnaJ domain Atu2114 PF05099 Tellurite resistance protein TerB Atu2115 PF00365 Phosphofructokinase Atu2116 PF01810 Atu2116 Atu2117 PF01464 Transglycosylase SLT domain Atu2119 PF11899 Atu2119 Atu2120 PF13649 Methyltransferase domain Atu2121 PF01183 Glycosyl hydrolases family 25 Atu2122 PF01471 Putative peptidoglycan binding domain Atu2122 PF13406 Transglycosylase SLT domain Atu2123 PF02219 Methylenetetrahydrofolate reductase Atu2124 PF01022 Bacterial regulatory protein, arsR family Atu2124 PF08241 Methyltransferase domain Atu2125 PF00005 ABC transporter Atu2125 PF12848 ABC transporter Atu2126 PF12146 Putative lysophospholipase Atu2127 PF02515 CoA-transferase family III Atu2128 PF00205 Thiamine pyrophosphate enzyme, central domain Atu2128 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Atu2128 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Atu2129 PF13883 Pyridoxamine 5'-phosphate oxidase Atu2130 PF01042 Endoribonuclease L-PSP Atu2131 PF04273 Putative phosphatase (DUF442) Atu2132 PF14486 Domain of unknown function (DUF4432) Atu2133 PF03734 L,D-transpeptidase catalytic domain Atu2134 PF07690 Major Facilitator Superfamily Atu2135 PF00440 Bacterial regulatory proteins, tetR family Atu2136 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atu2138 PF00465 Iron-containing alcohol dehydrogenase Atu2139 PF00171 Aldehyde dehydrogenase family Atu2141 PF01381 Helix-turn-helix Atu2142 PF00120 Glutamine synthetase, catalytic domain Atu2143 PF13520 Amino acid permease Atu2144 PF05013 N-formylglutamate amidohydrolase Atu2145 PF01380 SIS domain Atu2145 PF01418 Helix-turn-helix domain, rpiR family Atu2147 PF13343 Bacterial extracellular solute-binding protein Atu2148 PF00528 Binding-protein-dependent transport system inner membrane component Atu2149 PF00528 Binding-protein-dependent transport system inner membrane component Atu2150 PF00005 ABC transporter Atu2150 PF08402 TOBE domain Atu2151 PF00107 Zinc-binding dehydrogenase Atu2151 PF08240 Alcohol dehydrogenase GroES-like domain Atu2153 PF13304 AAA domain Atu2153 PF13476 AAA domain Atu2154 PF07690 Major Facilitator Superfamily Atu2155 PF00809 Pterin binding enzyme Atu2155 PF02310 B12 binding domain Atu2155 PF02574 Homocysteine S-methyltransferase Atu2155 PF02607 B12 binding domain Atu2155 PF02965 Vitamin B12 dependent methionine synthase, activation domain Atu2156 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) Atu2157 PF13350 Tyrosine phosphatase family Atu2159 PF13505 Outer membrane protein beta-barrel domain Atu2162 PF04402 Protein of unknown function (DUF541) Atu2164 PF01894 Uncharacterised protein family UPF0047 Atu2165 PF00072 Response regulator receiver domain Atu2165 PF00360 Phytochrome region Atu2165 PF01590 GAF domain Atu2165 PF07536 Atu2165 Atu2165 PF08446 PAS fold Atu2166 PF06059 Atu2166 Atu2167 PF00140 Sigma-70 factor, region 1 Atu2167 PF03979 Sigma-70 factor, region 1 Atu2167 PF04539 Sigma-70 region 3 Atu2167 PF04542 Sigma-70 region 2 Atu2167 PF04545 Sigma-70, region 4 Atu2167 PF04546 Sigma-70, non-essential region Atu2168 PF01807 CHC2 zinc finger Atu2168 PF08275 DNA primase catalytic core, N-terminal domain Atu2168 PF10410 DnaB-helicase binding domain of primase Atu2168 PF13662 Toprim domain Atu2169 PF09424 Yqey-like protein Atu2170 PF00117 Glutamine amidotransferase class-I Atu2170 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Atu2171 PF00561 alpha/beta hydrolase fold Atu2172 PF01554 MatE Atu2173 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu2173 PF00672 HAMP domain Atu2173 PF02743 Cache domain Atu2174 PF11158 Atu2174 Atu2175 PF04228 Atu2175 Atu2176 PF10067 Atu2176 Atu2177 PF04397 LytTr DNA-binding domain Atu2178 PF02142 MGS-like domain Atu2178 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atu2178 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Atu2179 PF00990 GGDEF domain Atu2180 PF03167 Uracil DNA glycosylase superfamily Atu2180 PF13566 Atu2180 Atu2182 PF01272 Transcription elongation factor, GreA/GreB, C-term Atu2182 PF03449 Transcription elongation factor, N-terminal Atu2183 PF00534 Glycosyl transferases group 1 Atu2184 PF01037 AsnC family Atu2184 PF13412 Winged helix-turn-helix DNA-binding Atu2185 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu2186 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2186 PF03466 LysR substrate binding domain Atu2187 PF12840 Helix-turn-helix domain Atu2188 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Atu2190 PF13460 NADH(P)-binding Atu2191 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2191 PF03466 LysR substrate binding domain Atu2193 PF09954 Atu2193 Atu2195 PF01699 Sodium/calcium exchanger protein Atu2196 PF00155 Aminotransferase class I and II Atu2197 PF00563 EAL domain Atu2199 PF00892 EamA-like transporter family Atu2200 PF00313 'Cold-shock' DNA-binding domain Atu2201 PF00753 Metallo-beta-lactamase superfamily Atu2203 PF06823 Atu2203 Atu2203 PF08239 Bacterial SH3 domain Atu2205 PF12802 MarR family Atu2206 PF00072 Response regulator receiver domain Atu2206 PF00486 Transcriptional regulatory protein, C terminal Atu2207 PF00672 HAMP domain Atu2207 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu2208 PF01588 Putative tRNA binding domain Atu2209 PF03807 NADP oxidoreductase coenzyme F420-dependent Atu2209 PF14748 Pyrroline-5-carboxylate reductase dimerisation Atu2213 PF01790 Atu2213 Atu2214 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase Atu2215 PF02578 Multi-copper polyphenol oxidoreductase laccase Atu2216 PF00557 Metallopeptidase family M24 Atu2216 PF01321 Creatinase/Prolidase N-terminal domain Atu2218 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Atu2218 PF14572 Phosphoribosyl synthetase-associated domain Atu2220 PF13231 Atu2220 Atu2221 PF07578 Lipid A Biosynthesis N-terminal domain Atu2222 PF00535 Glycosyl transferase family 2 Atu2223 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu2223 PF00672 HAMP domain Atu2224 PF00171 Aldehyde dehydrogenase family Atu2225 PF01614 Bacterial transcriptional regulator Atu2225 PF02954 Bacterial regulatory protein, Fis family Atu2226 PF00563 EAL domain Atu2226 PF00990 GGDEF domain Atu2226 PF03707 Atu2226 Atu2227 PF01386 Ribosomal L25p family Atu2227 PF14693 Ribosomal protein TL5, C-terminal domain Atu2228 PF00563 EAL domain Atu2228 PF00672 HAMP domain Atu2228 PF00989 PAS fold Atu2228 PF00990 GGDEF domain Atu2229 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu2230 PF01195 Peptidyl-tRNA hydrolase Atu2231 PF00583 Acetyltransferase (GNAT) family Atu2232 PF02617 ATP-dependent Clp protease adaptor protein ClpS Atu2233 PF01926 50S ribosome-binding GTPase Atu2233 PF06071 Protein of unknown function (DUF933) Atu2234 PF01575 MaoC like domain Atu2235 PF01575 MaoC like domain Atu2236 PF00156 Phosphoribosyl transferase domain Atu2237 PF02167 Cytochrome C1 family Atu2238 PF00032 Cytochrome b(C-terminal)/b6/petD Atu2238 PF00033 Cytochrome b(N-terminal)/b6/petB Atu2239 PF00355 Rieske [2Fe-2S] domain Atu2239 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Atu2240 PF03372 Endonuclease/Exonuclease/phosphatase family Atu2241 PF00005 ABC transporter Atu2241 PF00664 ABC transporter transmembrane region Atu2242 PF00005 ABC transporter Atu2242 PF00664 ABC transporter transmembrane region Atu2243 PF00149 Calcineurin-like phosphoesterase Atu2244 PF00588 SpoU rRNA Methylase family Atu2245 PF01895 PhoU domain Atu2245 PF02690 Atu2245 Atu2247 PF01218 Coproporphyrinogen III oxidase Atu2249 PF06348 Atu2249 Atu2250 PF01743 Poly A polymerase head domain Atu2250 PF12627 Probable RNA and SrmB- binding site of polymerase A Atu2251 PF00293 NUDIX domain Atu2252 PF06938 Protein of unknown function (DUF1285) Atu2253 PF07726 ATPase family associated with various cellular activities (AAA) Atu2254 PF01882 Atu2254 Atu2258 PF00583 Acetyltransferase (GNAT) family Atu2259 PF07690 Major Facilitator Superfamily Atu2260 PF00583 Acetyltransferase (GNAT) family Atu2261 PF13409 Glutathione S-transferase, N-terminal domain Atu2261 PF13410 Glutathione S-transferase, C-terminal domain Atu2262 PF00293 NUDIX domain Atu2263 PF00149 Calcineurin-like phosphoesterase Atu2264 PF00682 HMGL-like Atu2264 PF08502 LeuA allosteric (dimerisation) domain Atu2265 PF03594 Atu2265 Atu2266 PF13449 Esterase-like activity of phytase Atu2267 PF06532 Atu2267 Atu2268 PF04542 Sigma-70 region 2 Atu2268 PF08281 Sigma-70, region 4 Atu2270 PF00574 Clp protease Atu2271 PF04955 Atu2271 Atu2272 PF09849 Atu2272 Atu2273 PF14489 QueF-like protein Atu2274 PF01545 Cation efflux family Atu2274 PF16916 Atu2274 Atu2276 PF13458 Periplasmic binding protein Atu2277 PF11294 Atu2277 Atu2278 PF01022 Bacterial regulatory protein, arsR family Atu2279 PF00005 ABC transporter Atu2280 PF00528 Binding-protein-dependent transport system inner membrane component Atu2281 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Atu2282 PF00265 Thymidine kinase Atu2283 PF00127 Copper binding proteins, plastocyanin/azurin family Atu2284 PF10095 Atu2284 Atu2285 PF00196 Bacterial regulatory proteins, luxR family Atu2285 PF03472 Autoinducer binding domain Atu2286 PF03350 Atu2286 Atu2287 PF00593 TonB dependent receptor Atu2287 PF07715 TonB-dependent Receptor Plug Domain Atu2288 PF06904 Atu2288 Atu2289 PF00117 Glutamine amidotransferase class-I Atu2289 PF00425 chorismate binding enzyme Atu2289 PF04715 Anthranilate synthase component I, N terminal region Atu2290 PF00583 Acetyltransferase (GNAT) family Atu2291 PF01966 HD domain Atu2291 PF11871 Atu2291 Atu2292 PF01979 Amidohydrolase family Atu2292 PF13382 Adenine deaminase C-terminal domain Atu2294 PF00583 Acetyltransferase (GNAT) family Atu2295 PF00128 Alpha amylase, catalytic domain Atu2295 PF16657 Atu2295 Atu2296 PF00294 pfkB family carbohydrate kinase Atu2297 PF13439 Glycosyltransferase Family 4 Atu2297 PF13692 Glycosyl transferases group 1 Atu2299 PF09641 Protein of unknown function (DUF2026) Atu2300 PF01926 50S ribosome-binding GTPase Atu2300 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Atu2301 PF09976 Tetratricopeptide repeat Atu2302 PF07298 Atu2302 Atu2303 PF01522 Polysaccharide deacetylase Atu2304 PF05992 Atu2304 Atu2305 PF06779 Atu2305 Atu2306 PF00557 Metallopeptidase family M24 Atu2307 PF00296 Luciferase-like monooxygenase Atu2308 PF13561 Enoyl-(Acyl carrier protein) reductase Atu2309 PF00941 FAD binding domain in molybdopterin dehydrogenase Atu2309 PF01799 [2Fe-2S] binding domain Atu2309 PF03450 CO dehydrogenase flavoprotein C-terminal domain Atu2310 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Atu2310 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Atu2311 PF02625 XdhC and CoxI family Atu2311 PF13478 XdhC Rossmann domain Atu2312 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2312 PF03466 LysR substrate binding domain Atu2314 PF06181 Atu2314 Atu2315 PF01979 Amidohydrolase family Atu2316 PF01925 Atu2316 Atu2318 PF01070 FMN-dependent dehydrogenase Atu2319 PF00893 Small Multidrug Resistance protein Atu2320 PF00440 Bacterial regulatory proteins, tetR family Atu2321 PF00768 D-alanyl-D-alanine carboxypeptidase Atu2321 PF05036 Sporulation related domain Atu2322 PF12850 Calcineurin-like phosphoesterase superfamily domain Atu2323 PF00576 HIUase/Transthyretin family Atu2324 PF04115 Ureidoglycolate hydrolase Atu2325 PF01934 Protein of unknown function DUF86 Atu2326 PF01909 Nucleotidyltransferase domain Atu2327 PF09349 OHCU decarboxylase Atu2328 PF01522 Polysaccharide deacetylase Atu2329 PF06299 Atu2329 Atu2330 PF01266 FAD dependent oxidoreductase Atu2331 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Atu2332 PF00072 Response regulator receiver domain Atu2332 PF00512 His Kinase A (phospho-acceptor) domain Atu2332 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu2332 PF08448 PAS fold Atu2332 PF12860 Atu2332 Atu2333 PF00270 DEAD/DEAH box helicase Atu2333 PF00271 Helicase conserved C-terminal domain Atu2334 PF00892 EamA-like transporter family Atu2335 PF07681 Atu2335 Atu2336 PF03734 L,D-transpeptidase catalytic domain Atu2337 PF00892 EamA-like transporter family Atu2338 PF14403 Atu2338 Atu2339 PF04168 Atu2339 Atu2340 PF01841 Transglutaminase-like superfamily Atu2340 PF08379 Atu2340 Atu2341 PF13489 Methyltransferase domain Atu2342 PF00583 Acetyltransferase (GNAT) family Atu2343 PF13673 Acetyltransferase (GNAT) domain Atu2344 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu2346 PF02653 Atu2346 Atu2347 PF00005 ABC transporter Atu2348 PF13407 Periplasmic binding protein domain Atu2350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2350 PF03466 LysR substrate binding domain Atu2354 PF12802 MarR family Atu2356 PF04932 Atu2356 Atu2358 PF01757 Atu2358 Atu2360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu2360 PF00672 HAMP domain Atu2361 PF07690 Major Facilitator Superfamily Atu2362 PF02574 Homocysteine S-methyltransferase Atu2363 PF00528 Binding-protein-dependent transport system inner membrane component Atu2364 PF00528 Binding-protein-dependent transport system inner membrane component Atu2365 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atu2366 PF00005 ABC transporter Atu2369 PF13527 Acetyltransferase (GNAT) domain Atu2371 PF00331 Glycosyl hydrolase family 10 Atu2372 PF00535 Glycosyl transferase family 2 Atu2373 PF13641 Glycosyltransferase like family 2 Atu2375 PF03808 Atu2375 Atu2377 PF02706 Chain length determinant protein Atu2377 PF13807 Atu2377 Atu2379 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Atu2379 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Atu2379 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Atu2379 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Atu2380 PF01152 Bacterial-like globin Atu2381 PF04241 Atu2381 Atu2383 PF10087 Atu2383 Atu2384 PF00440 Bacterial regulatory proteins, tetR family Atu2384 PF08362 YcdC-like protein, C-terminal region Atu2385 PF01546 Peptidase family M20/M25/M40 Atu2385 PF07687 Peptidase dimerisation domain Atu2386 PF01979 Amidohydrolase family Atu2387 PF00293 NUDIX domain Atu2388 PF00005 ABC transporter Atu2389 PF00528 Binding-protein-dependent transport system inner membrane component Atu2390 PF00528 Binding-protein-dependent transport system inner membrane component Atu2391 PF09084 NMT1/THI5 like Atu2392 PF16576 Atu2392 Atu2393 PF00873 AcrB/AcrD/AcrF family Atu2394 PF00027 Cyclic nucleotide-binding domain Atu2394 PF13545 Crp-like helix-turn-helix domain Atu2395 PF00753 Metallo-beta-lactamase superfamily Atu2396 PF02492 CobW/HypB/UreG, nucleotide-binding domain Atu2397 PF01730 UreF Atu2398 PF02814 UreE urease accessory protein, N-terminal domain Atu2398 PF05194 UreE urease accessory protein, C-terminal domain Atu2399 PF08534 Redoxin Atu2400 PF09601 Atu2400 Atu2401 PF00449 Urease alpha-subunit, N-terminal domain Atu2401 PF01979 Amidohydrolase family Atu2403 PF07007 Protein of unknown function (DUF1311) Atu2404 PF04828 Glutathione-dependent formaldehyde-activating enzyme Atu2405 PF00699 Urease beta subunit Atu2406 PF06906 Atu2406 Atu2407 PF00547 Urease, gamma subunit Atu2408 PF01774 UreD urease accessory protein Atu2410 PF00005 ABC transporter Atu2411 PF00005 ABC transporter Atu2411 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu2412 PF02653 Atu2412 Atu2413 PF02653 Atu2413 Atu2414 PF13433 Periplasmic binding protein domain Atu2415 PF10931 Atu2415 Atu2416 PF00120 Glutamine synthetase, catalytic domain Atu2416 PF03951 Glutamine synthetase, beta-Grasp domain Atu2417 PF13561 Enoyl-(Acyl carrier protein) reductase Atu2418 PF00072 Response regulator receiver domain Atu2418 PF00512 His Kinase A (phospho-acceptor) domain Atu2418 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu2419 PF00072 Response regulator receiver domain Atu2419 PF00196 Bacterial regulatory proteins, luxR family Atu2420 PF13521 AAA domain Atu2421 PF01522 Polysaccharide deacetylase Atu2422 PF13458 Periplasmic binding protein Atu2424 PF00005 ABC transporter Atu2425 PF00005 ABC transporter Atu2425 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu2426 PF02653 Atu2426 Atu2426 PF11862 Atu2426 Atu2427 PF02653 Atu2427 Atu2428 PF00459 Inositol monophosphatase family Atu2430 PF06627 Protein of unknown function (DUF1153) Atu2431 PF14542 GCN5-related N-acetyl-transferase Atu2432 PF06348 Atu2432 Atu2434 PF00072 Response regulator receiver domain Atu2434 PF00486 Transcriptional regulatory protein, C terminal Atu2435 PF13302 Acetyltransferase (GNAT) domain Atu2436 PF12697 Alpha/beta hydrolase family Atu2437 PF13302 Acetyltransferase (GNAT) domain Atu2438 PF10090 Uncharacterized protein conserved in bacteria (DUF2328) Atu2439 PF06577 Atu2439 Atu2441 PF00588 SpoU rRNA Methylase family Atu2443 PF00849 RNA pseudouridylate synthase Atu2443 PF01479 S4 domain Atu2444 PF13578 Methyltransferase domain Atu2445 PF00140 Sigma-70 factor, region 1 Atu2445 PF04542 Sigma-70 region 2 Atu2445 PF04545 Sigma-70, region 4 Atu2447 PF00709 Adenylosuccinate synthetase Atu2448 PF00892 EamA-like transporter family Atu2449 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP Atu2451 PF01464 Transglycosylase SLT domain Atu2452 PF01738 Dienelactone hydrolase family Atu2453 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu2454 PF04954 Siderophore-interacting protein Atu2454 PF08021 Siderophore-interacting FAD-binding domain Atu2454 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) Atu2455 PF03167 Uracil DNA glycosylase superfamily Atu2456 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu2457 PF04304 Atu2457 Atu2458 PF00005 ABC transporter Atu2459 PF01032 FecCD transport family Atu2460 PF01497 Periplasmic binding protein Atu2461 PF03992 Antibiotic biosynthesis monooxygenase Atu2462 PF06228 Haem utilisation ChuX/HutX Atu2463 PF03724 META domain Atu2463 PF09619 Type III secretion system lipoprotein chaperone (YscW) Atu2464 PF00551 Formyl transferase Atu2465 PF00512 His Kinase A (phospho-acceptor) domain Atu2465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu2465 PF08521 Atu2465 Atu2466 PF00072 Response regulator receiver domain Atu2466 PF00486 Transcriptional regulatory protein, C terminal Atu2467 PF13416 Bacterial extracellular solute-binding protein Atu2469 PF03401 Tripartite tricarboxylate transporter family receptor Atu2470 PF07331 Atu2470 Atu2471 PF01970 Atu2471 Atu2473 PF01497 Periplasmic binding protein Atu2474 PF01032 FecCD transport family Atu2475 PF01032 FecCD transport family Atu2476 PF00005 ABC transporter Atu2477 PF00210 Ferritin-like domain Atu2480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2480 PF03466 LysR substrate binding domain Atu2481 PF07859 alpha/beta hydrolase fold Atu2482 PF13533 Biotin-lipoyl like Atu2483 PF00873 AcrB/AcrD/AcrF family Atu2485 PF03372 Endonuclease/Exonuclease/phosphatase family Atu2486 PF13091 PLD-like domain Atu2486 PF13396 Atu2486 Atu2487 PF08543 Phosphomethylpyrimidine kinase Atu2488 PF00484 Carbonic anhydrase Atu2489 PF13406 Transglycosylase SLT domain Atu2490 PF01118 Semialdehyde dehydrogenase, NAD binding domain Atu2490 PF02774 Semialdehyde dehydrogenase, dimerisation domain Atu2492 PF00083 Sugar (and other) transporter Atu2493 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Atu2493 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Atu2493 PF12769 Domain of unknown function (DUF3814) Atu2494 PF02233 NAD(P) transhydrogenase beta subunit Atu2495 PF01613 Flavin reductase like domain Atu2496 PF00881 Nitroreductase family Atu2497 PF00561 alpha/beta hydrolase fold Atu2498 PF01042 Endoribonuclease L-PSP Atu2499 PF00857 Isochorismatase family Atu2500 PF00296 Luciferase-like monooxygenase Atu2502 PF01126 Heme oxygenase Atu2503 PF00701 Dihydrodipicolinate synthetase family Atu2504 PF00392 Bacterial regulatory proteins, gntR family Atu2504 PF07729 FCD domain Atu2505 PF01547 Bacterial extracellular solute-binding protein Atu2506 PF00528 Binding-protein-dependent transport system inner membrane component Atu2507 PF00528 Binding-protein-dependent transport system inner membrane component Atu2508 PF00005 ABC transporter Atu2508 PF08402 TOBE domain Atu2509 PF00294 pfkB family carbohydrate kinase Atu2510 PF03576 Peptidase family S58 Atu2511 PF01063 Aminotransferase class IV Atu2512 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2512 PF03466 LysR substrate binding domain Atu2513 PF00144 Beta-lactamase Atu2514 PF00005 ABC transporter Atu2515 PF00005 ABC transporter Atu2516 PF00528 Binding-protein-dependent transport system inner membrane component Atu2516 PF12911 Atu2516 Atu2517 PF00528 Binding-protein-dependent transport system inner membrane component Atu2518 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu2519 PF01244 Membrane dipeptidase (Peptidase family M19) Atu2521 PF03706 Atu2521 Atu2521 PF09924 Uncharacterized conserved protein (DUF2156) Atu2522 PF06057 Bacterial virulence protein (VirJ) Atu2523 PF16684 Atu2523 Atu2524 PF06748 Protein of unknown function (DUF1217) Atu2525 PF07690 Major Facilitator Superfamily Atu2526 PF03795 YCII-related domain Atu2527 PF00775 Dioxygenase Atu2527 PF04444 Catechol dioxygenase N terminus Atu2528 PF00465 Iron-containing alcohol dehydrogenase Atu2529 PF04909 Amidohydrolase Atu2530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu2530 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Atu2531 PF01613 Flavin reductase like domain Atu2532 PF01047 MarR family Atu2534 PF13505 Outer membrane protein beta-barrel domain Atu2535 PF00512 His Kinase A (phospho-acceptor) domain Atu2535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu2536 PF00072 Response regulator receiver domain Atu2536 PF00486 Transcriptional regulatory protein, C terminal Atu2537 PF00440 Bacterial regulatory proteins, tetR family Atu2538 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Atu2538 PF13450 NAD(P)-binding Rossmann-like domain Atu2548 PF01259 SAICAR synthetase Atu2549 PF00440 Bacterial regulatory proteins, tetR family Atu2550 PF16576 Atu2550 Atu2551 PF00873 AcrB/AcrD/AcrF family Atu2552 PF02321 Outer membrane efflux protein Atu2553 PF01132 Elongation factor P (EF-P) OB domain Atu2553 PF08207 Elongation factor P (EF-P) KOW-like domain Atu2553 PF09285 Elongation factor P, C-terminal Atu2554 PF00152 tRNA synthetases class II (D, K and N) Atu2555 PF04055 Radical SAM superfamily Atu2555 PF13353 4Fe-4S single cluster domain Atu2558 PF01037 AsnC family Atu2559 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2559 PF03466 LysR substrate binding domain Atu2560 PF01266 FAD dependent oxidoreductase Atu2561 PF13531 Bacterial extracellular solute-binding protein Atu2562 PF00528 Binding-protein-dependent transport system inner membrane component Atu2563 PF00005 ABC transporter Atu2563 PF03459 TOBE domain Atu2564 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atu2565 PF03576 Peptidase family S58 Atu2566 PF05690 Thiazole biosynthesis protein ThiG Atu2567 PF02597 ThiS family Atu2568 PF01266 FAD dependent oxidoreductase Atu2569 PF01964 ThiC family Atu2569 PF13667 ThiC-associated domain Atu2571 PF00550 Phosphopantetheine attachment site Atu2572 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Atu2572 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu2574 PF08893 Atu2574 Atu2576 PF12146 Putative lysophospholipase Atu2576 PF12697 Alpha/beta hydrolase family Atu2577 PF00005 ABC transporter Atu2577 PF00664 ABC transporter transmembrane region Atu2578 PF00027 Cyclic nucleotide-binding domain Atu2579 PF12706 Beta-lactamase superfamily domain Atu2580 PF00111 2Fe-2S iron-sulfur cluster binding domain Atu2580 PF00211 Adenylate and Guanylate cyclase catalytic domain Atu2582 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Atu2582 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Atu2582 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Atu2583 PF00534 Glycosyl transferases group 1 Atu2585 PF04488 Glycosyltransferase sugar-binding region containing DXD motif Atu2586 PF00005 ABC transporter Atu2586 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atu2587 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu2588 PF00528 Binding-protein-dependent transport system inner membrane component Atu2589 PF00528 Binding-protein-dependent transport system inner membrane component Atu2589 PF12911 Atu2589 Atu2590 PF04101 Glycosyltransferase family 28 C-terminal domain Atu2591 PF00534 Glycosyl transferases group 1 Atu2592 PF04101 Glycosyltransferase family 28 C-terminal domain Atu2593 PF03932 CutC family Atu2594 PF07690 Major Facilitator Superfamily Atu2595 PF07171 MlrC C-terminus Atu2595 PF07364 Protein of unknown function (DUF1485) Atu2596 PF00728 Glycosyl hydrolase family 20, catalytic domain Atu2596 PF02838 Glycosyl hydrolase family 20, domain 2 Atu2597 PF13561 Enoyl-(Acyl carrier protein) reductase Atu2598 PF01380 SIS domain Atu2598 PF01418 Helix-turn-helix domain, rpiR family Atu2600 PF00005 ABC transporter Atu2601 PF13416 Bacterial extracellular solute-binding protein Atu2602 PF00528 Binding-protein-dependent transport system inner membrane component Atu2603 PF00528 Binding-protein-dependent transport system inner membrane component Atu2604 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atu2604 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Atu2606 PF00392 Bacterial regulatory proteins, gntR family Atu2606 PF07702 UTRA domain Atu2607 PF01380 SIS domain Atu2608 PF01979 Amidohydrolase family Atu2609 PF00480 ROK family Atu2610 PF01494 FAD binding domain Atu2611 PF01569 PAP2 superfamily Atu2612 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Atu2612 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal Atu2612 PF13288 DXP reductoisomerase C-terminal domain Atu2613 PF00155 Aminotransferase class I and II Atu2614 PF13488 Atu2614 Atu2615 PF01103 Surface antigen Atu2615 PF07244 Surface antigen variable number repeat Atu2616 PF04357 Atu2616 Atu2617 PF01584 CheW-like domain Atu2618 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atu2618 PF08447 PAS fold Atu2619 PF02634 FdhD/NarQ family Atu2621 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Atu2622 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atu2622 PF02874 ATP synthase alpha/beta family, beta-barrel domain Atu2623 PF00231 ATP synthase Atu2624 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atu2624 PF00306 ATP synthase alpha/beta chain, C terminal domain Atu2624 PF02874 ATP synthase alpha/beta family, beta-barrel domain Atu2625 PF00213 ATP synthase delta (OSCP) subunit Atu2627 PF04851 Type III restriction enzyme, res subunit Atu2628 PF00589 Phage integrase family Atu2628 PF02899 Phage integrase, N-terminal SAM-like domain Atu2629 PF01963 Atu2629 Atu2630 PF11066 Atu2630 Atu2631 PF01292 Prokaryotic cytochrome b561 Atu2632 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atu2632 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atu2633 PF01810 Atu2633 Atu2634 PF01124 MAPEG family Atu2635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Atu2635 PF00364 Biotin-requiring enzyme Atu2635 PF02817 e3 binding domain Atu2636 PF00676 Dehydrogenase E1 component Atu2636 PF02779 Transketolase, pyrimidine binding domain Atu2636 PF16078 Atu2636 Atu2636 PF16870 Atu2636 Atu2637 PF00549 CoA-ligase Atu2637 PF02629 CoA binding domain Atu2638 PF00549 CoA-ligase Atu2638 PF08442 ATP-grasp domain Atu2639 PF00056 lactate/malate dehydrogenase, NAD binding domain Atu2639 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Atu2640 PF03969 AFG1-like ATPase Atu2641 PF02974 Protease inhibitor Inh Atu2642 PF13085 2Fe-2S iron-sulfur cluster binding domain Atu2642 PF13534 4Fe-4S dicluster domain Atu2643 PF00890 FAD binding domain Atu2643 PF02910 Fumarate reductase flavoprotein C-term Atu2644 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Atu2645 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Atu2647 PF06325 Ribosomal protein L11 methyltransferase (PrmA) Atu2648 PF01878 EVE domain Atu2649 PF03795 YCII-related domain Atu2650 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Atu2650 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Atu2651 PF00814 Glycoprotease family Atu2652 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Atu2652 PF03900 Porphobilinogen deaminase, C-terminal domain Atu2653 PF02602 Uroporphyrinogen-III synthase HemD Atu2655 PF09731 Atu2655 Atu2656 PF07219 Atu2656 Atu2657 PF05099 Tellurite resistance protein TerB Atu2658 PF00117 Glutamine amidotransferase class-I Atu2659 PF05977 Transmembrane secretion effector Atu2660 PF02594 Uncharacterised ACR, YggU family COG1872 Atu2661 PF00719 Inorganic pyrophosphatase Atu2662 PF00583 Acetyltransferase (GNAT) family Atu2663 PF00009 Elongation factor Tu GTP binding domain Atu2663 PF00679 Elongation factor G C-terminus Atu2663 PF03144 Elongation factor Tu domain 2 Atu2664 PF01432 Peptidase family M3 Atu2665 PF12802 MarR family Atu2666 PF07690 Major Facilitator Superfamily Atu2667 PF00764 Arginosuccinate synthase Atu2668 PF00106 short chain dehydrogenase Atu2669 PF01810 Atu2669 Atu2670 PF00005 ABC transporter Atu2671 PF02653 Atu2671 Atu2672 PF04392 ABC transporter substrate binding protein Atu2673 PF04055 Radical SAM superfamily Atu2675 PF06803 Atu2675 Atu2676 PF01329 Pterin 4 alpha carbinolamine dehydratase Atu2677 PF01451 Low molecular weight phosphotyrosine protein phosphatase Atu2678 PF02834 LigT like Phosphoesterase Atu2679 PF13472 GDSL-like Lipase/Acylhydrolase family Atu2680 PF00005 ABC transporter Atu2681 PF02687 Atu2681 Atu2682 PF01027 Inhibitor of apoptosis-promoting Bax1 Atu2683 PF10984 Atu2683 Atu2684 PF06764 Protein of unknown function (DUF1223) Atu2685 PF00330 Aconitase family (aconitate hydratase) Atu2685 PF00694 Aconitase C-terminal domain Atu2686 PF00005 ABC transporter Atu2687 PF03379 Atu2687 Atu2688 PF01578 Atu2688 Atu2689 PF04995 Atu2689 Atu2690 PF08534 Redoxin Atu2691 PF00990 GGDEF domain Atu2692 PF04279 Atu2692 Atu2693 PF00448 SRP54-type protein, GTPase domain Atu2693 PF02881 SRP54-type protein, helical bundle domain Atu2694 PF00919 Uncharacterized protein family UPF0004 Atu2694 PF04055 Radical SAM superfamily Atu2695 PF01678 Diaminopimelate epimerase Atu2696 PF12706 Beta-lactamase superfamily domain Atu2697 PF00448 SRP54-type protein, GTPase domain Atu2697 PF02881 SRP54-type protein, helical bundle domain Atu2697 PF02978 Signal peptide binding domain Atu2698 PF01817 Chorismate mutase type II Atu2699 PF00886 Ribosomal protein S16 Atu2700 PF01782 RimM N-terminal domain Atu2700 PF05239 PRC-barrel domain Atu2701 PF01746 tRNA (Guanine-1)-methyltransferase Atu2702 PF01925 Atu2702 Atu2703 PF01245 Ribosomal protein L19 Atu2705 PF00005 ABC transporter Atu2705 PF00664 ABC transporter transmembrane region Atu2706 PF13437 HlyD family secretion protein Atu2706 PF13533 Biotin-lipoyl like Atu2708 PF07690 Major Facilitator Superfamily Atu2709 PF00330 Aconitase family (aconitate hydratase) Atu2710 PF01435 Peptidase family M48 Atu2712 PF00005 ABC transporter Atu2713 PF00528 Binding-protein-dependent transport system inner membrane component Atu2714 PF13343 Bacterial extracellular solute-binding protein Atu2716 PF00005 ABC transporter Atu2716 PF16326 Atu2716 Atu2717 PF04263 Thiamin pyrophosphokinase, catalytic domain Atu2718 PF04204 Homoserine O-succinyltransferase Atu2719 PF01263 Aldose 1-epimerase Atu2720 PF00912 Transglycosylase Atu2721 PF00348 Polyprenyl synthetase Atu2722 PF00691 OmpA family Atu2722 PF13488 Atu2722 Atu2723 PF04551 GcpE protein Atu2724 PF07690 Major Facilitator Superfamily Atu2725 PF00455 Atu2725 Atu2725 PF08220 DeoR-like helix-turn-helix domain Atu2726 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Atu2726 PF00364 Biotin-requiring enzyme Atu2726 PF00682 HMGL-like Atu2726 PF02436 Conserved carboxylase domain Atu2726 PF02785 Biotin carboxylase C-terminal domain Atu2726 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atu2727 PF00196 Bacterial regulatory proteins, luxR family Atu2727 PF03472 Autoinducer binding domain Atu2728 PF00005 ABC transporter Atu2728 PF00664 ABC transporter transmembrane region Atu2730 PF06165 Glycosyltransferase family 36 Atu2730 PF10091 Putative glucoamylase Atu2730 PF17167 Atu2730 Atu2732 PF01546 Peptidase family M20/M25/M40 Atu2732 PF07687 Peptidase dimerisation domain Atu2734 PF01266 FAD dependent oxidoreductase Atu2735 PF00291 Pyridoxal-phosphate dependent enzyme Atu2736 PF00920 Dehydratase family Atu2737 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Atu2737 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Atu2738 PF01370 NAD dependent epimerase/dehydratase family Atu2739 PF01565 FAD binding domain Atu2739 PF02913 FAD linked oxidases, C-terminal domain Atu2740 PF00392 Bacterial regulatory proteins, gntR family Atu2740 PF07729 FCD domain Atu2741 PF01557 Fumarylacetoacetate (FAA) hydrolase family Atu2742 PF04290 Atu2742 Atu2743 PF06808 Atu2743 Atu2744 PF03480 Bacterial extracellular solute-binding protein, family 7 Atu2745 PF00501 AMP-binding enzyme Atu2745 PF13193 AMP-binding enzyme C-terminal domain Atu2745 PF16177 Atu2745 Atu2746 PF06242 Atu2746 Atu2747 PF01168 Alanine racemase, N-terminal domain Atu2748 PF00133 tRNA synthetases class I (I, L, M and V) Atu2748 PF08264 Anticodon-binding domain of tRNA Atu2748 PF13603 Leucyl-tRNA synthetase, Domain 2 Atu2749 PF04390 Lipopolysaccharide-assembly Atu2750 PF06144 DNA polymerase III, delta subunit Atu2751 PF00037 4Fe-4S binding domain Atu2751 PF11953 Domain of unknown function (DUF3470) Atu2752 PF01479 S4 domain Atu2753 PF00271 Helicase conserved C-terminal domain Atu2755 PF01494 FAD binding domain Atu2756 PF13622 Thioesterase-like superfamily Atu2757 PF00543 Nitrogen regulatory protein P-II Atu2758 PF00909 Ammonium Transporter Family Atu2759 PF01580 FtsK/SpoIIIE family Atu2759 PF09397 Ftsk gamma domain Atu2759 PF13491 Atu2759 Atu2760 PF03548 Outer membrane lipoprotein carrier protein LolA Atu2761 PF03372 Endonuclease/Exonuclease/phosphatase family Atu2762 PF00027 Cyclic nucleotide-binding domain Atu2763 PF00072 Response regulator receiver domain Atu2763 PF00486 Transcriptional regulatory protein, C terminal Atu2764 PF03734 L,D-transpeptidase catalytic domain Atu2765 PF02559 CarD-like/TRCF domain Atu2766 PF05088 Atu2766 Atu2767 PF11700 Atu2767 Atu2768 PF05233 Atu2768 Atu2768 PF07879 Atu2768 Atu2769 PF00108 Thiolase, N-terminal domain Atu2769 PF02803 Thiolase, C-terminal domain Atu2770 PF13561 Enoyl-(Acyl carrier protein) reductase Atu2771 PF00210 Ferritin-like domain Atu2772 PF00293 NUDIX domain Atu2773 PF04748 Divergent polysaccharide deacetylase Atu2774 PF03572 Peptidase family S41 Atu2774 PF13180 PDZ domain Atu2775 PF01551 Peptidase family M23 Atu2776 PF02590 Predicted SPOUT methyltransferase Atu2777 PF02410 Oligomerisation domain Atu2778 PF01467 Cytidylyltransferase Atu2779 PF00171 Aldehyde dehydrogenase family Atu2780 PF00696 Amino acid kinase family Atu2780 PF01472 PUA domain Atu2781 PF01018 GTP1/OBG Atu2781 PF01926 50S ribosome-binding GTPase Atu2782 PF13302 Acetyltransferase (GNAT) domain Atu2783 PF13302 Acetyltransferase (GNAT) domain Atu2784 PF01016 Ribosomal L27 protein Atu2785 PF00829 Ribosomal prokaryotic L21 protein Atu2786 PF06262 Possibl zinc metallo-peptidase Atu2787 PF08410 Atu2787 Atu2788 PF03328 HpcH/HpaI aldolase/citrate lyase family Atu2790 PF00694 Aconitase C-terminal domain Atu2791 PF00180 Isocitrate/isopropylmalate dehydrogenase Atu2792 PF00034 Cytochrome c Atu2792 PF03150 Di-haem cytochrome c peroxidase Atu2793 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atu2793 PF07685 CobB/CobQ-like glutamine amidotransferase domain Atu2794 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu2795 PF01888 CbiD Atu2796 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu2797 PF01890 Cobalamin synthesis G C-terminus Atu2798 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu2798 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Atu2799 PF02571 Atu2799 Atu2800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu2801 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atu2802 PF02570 Precorrin-8X methylmutase Atu2803 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Atu2804 PF02514 Atu2804 Atu2805 PF02492 CobW/HypB/UreG, nucleotide-binding domain Atu2805 PF07683 Cobalamin synthesis protein cobW C-terminal domain Atu2806 PF07845 Atu2806 Atu2807 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Atu2807 PF12557 Cob(I)alamin adenosyltransferase N terminal Atu2808 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atu2808 PF07685 CobB/CobQ-like glutamine amidotransferase domain Atu2809 PF03186 Atu2809 Atu2810 PF00155 Aminotransferase class I and II Atu2811 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atu2811 PF13378 Enolase C-terminal domain-like Atu2812 PF05336 Domain of unknown function (DUF718) Atu2813 PF08125 Mannitol dehydrogenase C-terminal domain Atu2814 PF00107 Zinc-binding dehydrogenase Atu2814 PF08240 Alcohol dehydrogenase GroES-like domain Atu2815 PF04909 Amidohydrolase Atu2816 PF00248 Aldo/keto reductase family Atu2817 PF13407 Periplasmic binding protein domain Atu2818 PF02653 Atu2818 Atu2819 PF00005 ABC transporter Atu2821 PF00392 Bacterial regulatory proteins, gntR family Atu2821 PF07729 FCD domain Atu2822 PF04295 Atu2822 Atu2822 PF08666 SAF domain Atu2823 PF01808 AICARFT/IMPCHase bienzyme Atu2823 PF02142 MGS-like domain Atu2824 PF07940 Heparinase II/III-like protein Atu2825 PF01029 NusB family Atu2825 PF01189 NOL1/NOP2/sun family Atu2826 PF01435 Peptidase family M48 Atu2827 PF07896 Protein of unknown function (DUF1674) Atu2828 PF02195 ParB-like nuclease domain Atu2829 PF13614 AAA domain Atu2830 PF02527 rRNA small subunit methyltransferase G Atu2831 PF01134 Glucose inhibited division protein A Atu2831 PF13932 GidA associated domain 3 Atu2832 PF01926 50S ribosome-binding GTPase Atu2832 PF10396 GTP-binding protein TrmE N-terminus Atu2832 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE Atu2833 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atu2833 PF07497 Rho termination factor, RNA-binding domain Atu2833 PF07498 Rho termination factor, N-terminal domain Atu2834 PF03653 Atu2834 Atu2835 PF01208 Uroporphyrinogen decarboxylase (URO-D) Atu3069 PF00317 Ribonucleotide reductase, all-alpha domain Atu3069 PF02867 Ribonucleotide reductase, barrel domain Atu3069 PF08343 Ribonucleotide reductase N-terminal Atu3079 PF01138 3' exoribonuclease family, domain 1 Atu3079 PF03725 3' exoribonuclease family, domain 2 Atu3079 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Atu3084 PF04760 Translation initiation factor IF-2, N-terminal region Atu3100 PF00905 Penicillin binding protein transpeptidase domain Atu3100 PF00912 Transglycosylase Atu3123 PF00005 ABC transporter Atu3143 PF04898 Glutamate synthase central domain Atu3192 PF00005 ABC transporter Atu3206 PF00883 Cytosol aminopeptidase family, catalytic domain Atu3242 PF03466 LysR substrate binding domain Atu3288 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Atu3288 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Atu3289 PF00378 Enoyl-CoA hydratase/isomerase family Atu3317 PF01553 Acyltransferase Atu3471 PF00512 His Kinase A (phospho-acceptor) domain Atu3471 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atu3471 PF12860 Atu3471 Atu3513 PF00669 Bacterial flagellin N-terminal helical region Atu3513 PF00700 Bacterial flagellin C-terminal helical region Atu3539 PF01266 FAD dependent oxidoreductase Atu3542 PF03486 HI0933-like protein Atu3562 PF01738 Dienelactone hydrolase family Atu3591 PF06748 Protein of unknown function (DUF1217) Atu3608 PF02754 Atu3608 Atu3617 PF03129 Anticodon binding domain Atu3622 PF00118 TCP-1/cpn60 chaperonin family Atu3630 PF00133 tRNA synthetases class I (I, L, M and V) Atu3636 PF00999 Sodium/hydrogen exchanger family Atu3648 PF00072 Response regulator receiver domain Atu3650 PF00563 EAL domain Atu3650 PF00990 GGDEF domain Atu3679 PF00672 HAMP domain Atu3692 PF00510 Cytochrome c oxidase subunit III Atu3703 PF08447 PAS fold Atu3718 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atu3727 PF00753 Metallo-beta-lactamase superfamily Atu3730 PF06039 Atu3730 Atu3761 PF01068 ATP dependent DNA ligase domain Atu3773 PF00106 short chain dehydrogenase Atu3775 PF05872 Atu3775 Atu3831 PF00122 E1-E2 ATPase Atu3831 PF00702 haloacid dehalogenase-like hydrolase Atu3837 PF00251 Glycosyl hydrolases family 32 N-terminal domain Atu3870 PF01578 Atu3870 Atu3870 PF16327 Atu3870 Atu3883 PF11940 Domain of unknown function (DUF3458) Atu3907 PF00155 Aminotransferase class I and II Atu3932 PF10101 Atu3932 Atu3951 PF00005 ABC transporter Atu3963 PF13537 Glutamine amidotransferase domain Atu4028 PF01612 3'-5' exonuclease Atu4029 PF07690 Major Facilitator Superfamily Atu4039 PF03989 DNA gyrase C-terminal domain, beta-propeller Atu4070 PF00122 E1-E2 ATPase Atu4085 PF02872 5'-nucleotidase, C-terminal domain Atu4086 PF00149 Calcineurin-like phosphoesterase Atu4106 PF00534 Glycosyl transferases group 1 Atu4130 PF00004 ATPase family associated with various cellular activities (AAA) Atu4130 PF02190 ATP-dependent protease La (LON) domain Atu4130 PF05362 Lon protease (S16) C-terminal proteolytic domain Atu4144 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Atu4155 PF12706 Beta-lactamase superfamily domain Atu4169 PF00072 Response regulator receiver domain Atu4169 PF00990 GGDEF domain Atu4202 PF10150 Ribonuclease E/G family Atu4230 PF00989 PAS fold Atu4230 PF13188 PAS domain Atu4235 PF07724 AAA domain (Cdc48 subfamily) Atu4235 PF10431 C-terminal, D2-small domain, of ClpB protein Atu4242 PF08904 Atu4242 Atu4255 PF02684 Atu4255 Atu4286 PF02770 Acyl-CoA dehydrogenase, middle domain Atu4286 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Atu4295 PF04909 Amidohydrolase Atu4300 PF00364 Biotin-requiring enzyme Atu4300 PF02779 Transketolase, pyrimidine binding domain Atu4303 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Atu4323 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Atu4323 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Atu4326 PF12832 MFS_1 like family Atu4330 PF02347 Glycine cleavage system P-protein Atu4367 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atu4376 PF00703 Glycosyl hydrolases family 2 Atu4385 PF13746 4Fe-4S dicluster domain Atu4392 PF00916 Atu4392 Atu4396 PF00924 Mechanosensitive ion channel Atu4402 PF00384 Molybdopterin oxidoreductase Atu4409 PF00107 Zinc-binding dehydrogenase Atu4428 PF00742 Homoserine dehydrogenase Atu4428 PF03447 Homoserine dehydrogenase, NAD binding domain Atu4518 PF01702 Queuine tRNA-ribosyltransferase Atu4569 PF02867 Ribonucleotide reductase, barrel domain Atu4569 PF08471 Atu4569 Atu4574 PF01566 Atu4574 Atu4576 PF00005 ABC transporter Atu4576 PF00664 ABC transporter transmembrane region Atu4586 PF02824 TGS domain Atu4586 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Atu4589 PF01227 GTP cyclohydrolase I Atu4653 PF03702 Uncharacterised protein family (UPF0075) Atu4669 PF00586 AIR synthase related protein, N-terminal domain Atu4669 PF02769 AIR synthase related protein, C-terminal domain Atu4690 PF00180 Isocitrate/isopropylmalate dehydrogenase Atu4711 PF00005 ABC transporter Atu4712 PF13407 Periplasmic binding protein domain Atu4718 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Atu4742 PF00189 Ribosomal protein S3, C-terminal domain Atu4787 PF03929 Atu4787 Atu4797 PF03372 Endonuclease/Exonuclease/phosphatase family Atu4818 PF01715 IPP transferase Atu4859 PF13476 AAA domain Atu4895 PF03738 Glutathionylspermidine synthase preATP-grasp Atu4897 PF01266 FAD dependent oxidoreductase Atu5014 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Atu5021 PF00580 UvrD/REP helicase N-terminal domain Atu5028 PF00512 His Kinase A (phospho-acceptor) domain Atu5049 PF01274 Malate synthase Atu5065 PF00271 Helicase conserved C-terminal domain Atu5067 PF00480 ROK family Atu5067 PF13412 Winged helix-turn-helix DNA-binding Atu5072 PF00317 Ribonucleotide reductase, all-alpha domain Atu5072 PF02867 Ribonucleotide reductase, barrel domain Atu5092 PF13406 Transglycosylase SLT domain Atu5096 PF12169 DNA polymerase III subunits gamma and tau domain III Atu5096 PF13177 DNA polymerase III, delta subunit Atu5142 PF00310 Glutamine amidotransferases class-II Atu5144 PF04898 Glutamate synthase central domain Atu5154 PF00175 Oxidoreductase NAD-binding domain Atu5159 PF00109 Beta-ketoacyl synthase, N-terminal domain Atu5276 PF00117 Glutamine amidotransferase class-I Atu5276 PF03054 tRNA methyl transferase Atu5293 PF02673 Atu5293 Atu5304 PF13416 Bacterial extracellular solute-binding protein Atu5308 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Atu5380 PF01156 Inosine-uridine preferring nucleoside hydrolase Atu5404 PF00342 Phosphoglucose isomerase Atu5436 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) Atu5470 PF04542 Sigma-70 region 2 Atu5474 PF13641 Glycosyltransferase like family 2 Atu5542 PF02107 Atu5542 Atu6030 PF00977 Histidine biosynthesis protein Atu6060 PF00317 Ribonucleotide reductase, all-alpha domain Atu6060 PF02867 Ribonucleotide reductase, barrel domain Atu6060 PF08343 Ribonucleotide reductase N-terminal Atu6072 PF01138 3' exoribonuclease family, domain 1 Atu6072 PF03725 3' exoribonuclease family, domain 2 Atu6072 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Atu6106 PF01625 Peptide methionine sulfoxide reductase Atu6120 PF00962 Adenosine/AMP deaminase Atu6158 PF00528 Binding-protein-dependent transport system inner membrane component Atu6174 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Atu6177 PF12911 Atu6177 Atu8019 PF08085 Atu8019 Atu8032 PF08345 Atu8032 Atu8034 PF07486 Cell Wall Hydrolase Atu8038 PF06170 Atu8038 Atu8061 PF01713 Smr domain Atu8065 PF00327 Ribosomal protein L30p/L7e Atu8066 PF00468 Ribosomal protein L34 Atu8086 PF13773 Domain of unknown function (DUF4170) Atu8087 PF01471 Putative peptidoglycan binding domain Atu8091 PF08002 Protein of unknown function (DUF1697) Atu8092 PF10755 Atu8092 Atu8115 PF10947 Atu8115 Atu8117 PF12680 SnoaL-like domain Atu8118 PF00582 Universal stress protein family Atu8119 PF05239 PRC-barrel domain Atu8120 PF06169 Protein of unknown function (DUF982) Atu8122 PF10065 Atu8122 Atu8124 PF05099 Tellurite resistance protein TerB Atu8126 PF09684 Atu8126 Atu8128 PF06995 Atu8128 Atu8129 PF00188 Cysteine-rich secretory protein family Atu8130 PF09608 Atu8130 Atu8131 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Atu8131 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Atu8131 PF04039 Atu8131 Atu8131 PF13244 Atu8131 Atu8134 PF01124 MAPEG family Atu8135 PF06568 Atu8135 Atu8137 PF05258 Atu8137 Atu8139 PF12570 Atu8139 Atu8143 PF06629 Atu8143 Atu8147 PF01476 LysM domain Atu8148 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Atu8148 PF01872 RibD C-terminal domain Atu8149 PF07238 PilZ domain Atu8150 PF13350 Tyrosine phosphatase family Atu8152 PF12096 Atu8152 Atu8154 PF05016 Plasmid stabilisation system protein Atu8156 PF03591 Atu8156 Atu8160 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) Atu8161 PF06568 Atu8161 Atu8163 PF07238 PilZ domain Atu8165 PF08755 Hemimethylated DNA-binding protein YccV like Atu8166 PF06169 Protein of unknown function (DUF982) Atu8167 PF13116 Atu8167 Atu8168 PF12893 Putative lumazine-binding Atu8169 PF08327 Activator of Hsp90 ATPase homolog 1-like protein Atu8170 PF11015 Protein of unknown function (DUF2853) Atu8171 PF04386 Stringent starvation protein B Atu8172 PF10722 Putative bacterial sensory transduction regulator Atu8173 PF04380 Atu8173 Atu8174 PF01569 PAP2 superfamily Atu8175 PF07584 Atu8175 Atu8175 PF13709 Domain of unknown function (DUF4159) Atu8178 PF10983 Atu8178 Atu8180 PF12692 S-adenosyl-L-methionine methyltransferase