ARAD_RS00025	SM00479	ARAD_RS00025
ARAD_RS00045	SM00978	ARAD_RS00045
ARAD_RS00050	SM00925	MltA specific insert domain
ARAD_RS00055	SM00463	Small MutS-related domain
ARAD_RS00060	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS00065	SM00387	Histidine kinase-like ATPases
ARAD_RS00065	SM00433	TopoisomeraseII
ARAD_RS00155	SM00387	Histidine kinase-like ATPases
ARAD_RS00155	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS00160	SM00996	S-adenosyl-L-homocysteine hydrolase
ARAD_RS00160	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
ARAD_RS00180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ARAD_RS00180	SM00387	Histidine kinase-like ATPases
ARAD_RS00180	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS00185	SM00448	cheY-homologous receiver domain
ARAD_RS00185	SM00862	Transcriptional regulatory protein, C terminal
ARAD_RS00250	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS00250	SM01086	C-terminal, D2-small domain, of ClpB protein
ARAD_RS00285	SM00448	cheY-homologous receiver domain
ARAD_RS00290	SM00387	Histidine kinase-like ATPases
ARAD_RS00290	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS00295	SM00487	DEAD-like helicases superfamily
ARAD_RS00295	SM00490	helicase superfamily c-terminal domain
ARAD_RS00295	SM00847	Helicase associated domain (HA2)  Add an annotation
ARAD_RS00365	SM00912	haemagglutination activity domain
ARAD_RS00450	SM00822	ARAD_RS00450
ARAD_RS00465	SM00354	helix_turn _helix lactose operon repressor
ARAD_RS00480	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS00520	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS00540	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS00575	SM00422	helix_turn_helix, mercury resistance
ARAD_RS00575	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS00580	SM00474	3'-5' exonuclease
ARAD_RS00590	SM00316	Ribosomal protein S1-like RNA-binding domain
ARAD_RS00655	SM00825	Beta-ketoacyl synthase
ARAD_RS00680	SM00316	Ribosomal protein S1-like RNA-binding domain
ARAD_RS00680	SM00322	K homology RNA-binding domain
ARAD_RS00685	SM01387	ARAD_RS00685
ARAD_RS00715	SM00316	Ribosomal protein S1-like RNA-binding domain
ARAD_RS00715	SM00322	K homology RNA-binding domain
ARAD_RS00730	SM00493	ARAD_RS00730
ARAD_RS00745	SM00344	helix_turn_helix ASNC type
ARAD_RS00755	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS00820	SM00287	Bacterial SH3 domain homologues
ARAD_RS00845	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS00855	SM00271	DnaJ molecular chaperone homology domain
ARAD_RS00905	SM00363	S4 RNA-binding domain
ARAD_RS00910	SM00448	cheY-homologous receiver domain
ARAD_RS00910	SM00862	Transcriptional regulatory protein, C terminal
ARAD_RS00915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ARAD_RS00915	SM00387	Histidine kinase-like ATPases
ARAD_RS00955	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ARAD_RS00955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ARAD_RS00960	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS00990	SM00052	Putative diguanylate phosphodiesterase
ARAD_RS01025	SM00855	Phosphoglycerate mutase family
ARAD_RS01070	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS01095	SM00052	Putative diguanylate phosphodiesterase
ARAD_RS01095	SM00267	diguanylate cyclase
ARAD_RS01100	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS01105	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
ARAD_RS01105	SM00474	3'-5' exonuclease
ARAD_RS01105	SM00475	5'-3' exonuclease
ARAD_RS01105	SM00479	ARAD_RS01105
ARAD_RS01105	SM00482	DNA polymerase A domain
ARAD_RS01140	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS01155	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS01160	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS01185	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ARAD_RS01185	SM00866	ARAD_RS01185
ARAD_RS01190	SM00855	Phosphoglycerate mutase family
ARAD_RS01200	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS01210	SM00851	MGS-like domain
ARAD_RS01245	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS01280	SM00354	helix_turn _helix lactose operon repressor
ARAD_RS01310	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS01320	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS01385	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS01410	SM01133	ARAD_RS01410
ARAD_RS01415	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
ARAD_RS01470	SM00858	ARAD_RS01470
ARAD_RS01520	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS01635	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS01640	SM01119	ARAD_RS01640
ARAD_RS01725	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS01795	SM00873	B3/4 domain
ARAD_RS01795	SM00874	tRNA synthetase B5 domain
ARAD_RS01795	SM00896	Ferredoxin-fold anticodon binding domain
ARAD_RS01810	SM00028	Tetratricopeptide repeats
ARAD_RS01810	SM01359	ARAD_RS01810
ARAD_RS01810	SM01360	ARAD_RS01810
ARAD_RS01840	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS01910	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS01925	SM00829	Enoylreductase
ARAD_RS01970	SM00822	ARAD_RS01970
ARAD_RS01975	SM00829	Enoylreductase
ARAD_RS02010	SM00822	ARAD_RS02010
ARAD_RS02130	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
ARAD_RS02145	SM00480	DNA polymerase III beta subunit
ARAD_RS02215	SM00344	helix_turn_helix ASNC type
ARAD_RS02235	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS02395	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
ARAD_RS02395	SM01232	ARAD_RS02395
ARAD_RS02410	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS02410	SM00760	Bacterial dnaA protein helix-turn-helix domain
ARAD_RS02430	SM00729	Elongator protein 3, MiaB family, Radical SAM
ARAD_RS02480	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS02500	SM00411	bacterial (prokaryotic) histone like domain
ARAD_RS02510	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
ARAD_RS02510	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ARAD_RS02530	SM00967	RNA 2'-O ribose methyltransferase substrate binding
ARAD_RS02540	SM00387	Histidine kinase-like ATPases
ARAD_RS02540	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS02540	SM00448	cheY-homologous receiver domain
ARAD_RS02550	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
ARAD_RS02555	SM00919	Malic enzyme, NAD binding domain
ARAD_RS02555	SM01274	ARAD_RS02555
ARAD_RS02560	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
ARAD_RS02560	SM00534	ATPase domain of DNA mismatch repair MUTS family
ARAD_RS02570	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ARAD_RS02600	SM00932	Scaffold protein Nfu/NifU N terminal
ARAD_RS02620	SM00563	Phosphate acyltransferases
ARAD_RS02625	SM00729	Elongator protein 3, MiaB family, Radical SAM
ARAD_RS02640	SM01091	Transporter associated domain
ARAD_RS02650	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS02680	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ARAD_RS02680	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ARAD_RS02745	SM00054	EF-hand, calcium binding motif
ARAD_RS02785	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
ARAD_RS02795	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS02795	SM00871	Bacterial transcription activator, effector binding domain
ARAD_RS02815	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ARAD_RS02815	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ARAD_RS02820	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ARAD_RS02820	SM00387	Histidine kinase-like ATPases
ARAD_RS02865	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS02945	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS03005	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS03055	SM00387	Histidine kinase-like ATPases
ARAD_RS03055	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS03075	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS03085	SM00448	cheY-homologous receiver domain
ARAD_RS03085	SM00862	Transcriptional regulatory protein, C terminal
ARAD_RS03135	SM00062	Bacterial periplasmic substrate-binding proteins
ARAD_RS03185	SM00028	Tetratricopeptide repeats
ARAD_RS03200	SM01230	ARAD_RS03200
ARAD_RS03215	SM00487	DEAD-like helicases superfamily
ARAD_RS03215	SM00490	helicase superfamily c-terminal domain
ARAD_RS03250	SM00671	Sel1-like repeats.
ARAD_RS03305	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS03310	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS03375	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ARAD_RS03385	SM00448	cheY-homologous receiver domain
ARAD_RS03390	SM00073	Histidine Phosphotransfer domain
ARAD_RS03390	SM00260	Two component signalling adaptor domain
ARAD_RS03390	SM00387	Histidine kinase-like ATPases
ARAD_RS03390	SM01231	ARAD_RS03390
ARAD_RS03395	SM00260	Two component signalling adaptor domain
ARAD_RS03400	SM00138	Methyltransferase, chemotaxis proteins 
ARAD_RS03405	SM00448	cheY-homologous receiver domain
ARAD_RS03410	SM00448	cheY-homologous receiver domain
ARAD_RS03430	SM00421	helix_turn_helix, Lux Regulon
ARAD_RS03435	SM00421	helix_turn_helix, Lux Regulon
ARAD_RS03475	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS03505	SM00858	ARAD_RS03505
ARAD_RS03600	SM00862	Transcriptional regulatory protein, C terminal
ARAD_RS03685	SM00354	helix_turn _helix lactose operon repressor
ARAD_RS03705	SM00642	Alpha-amylase domain
ARAD_RS03710	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS03750	SM01230	ARAD_RS03750
ARAD_RS03760	SM00248	ankyrin repeats
ARAD_RS03765	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ARAD_RS03765	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ARAD_RS03785	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS03810	SM00487	DEAD-like helicases superfamily
ARAD_RS03810	SM00490	helicase superfamily c-terminal domain
ARAD_RS03820	SM00091	PAS domain
ARAD_RS03820	SM00387	Histidine kinase-like ATPases
ARAD_RS03820	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS03880	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS03885	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS03910	SM00028	Tetratricopeptide repeats
ARAD_RS03955	SM00849	Metallo-beta-lactamase superfamily
ARAD_RS03960	SM00116	Domain in cystathionine beta-synthase and other proteins.
ARAD_RS03960	SM01240	ARAD_RS03960
ARAD_RS03990	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS04045	SM00996	S-adenosyl-L-homocysteine hydrolase
ARAD_RS04045	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
ARAD_RS04110	SM00829	Enoylreductase
ARAD_RS04160	SM00966	SpoVT / AbrB like domain 
ARAD_RS04185	SM00883	Chaperonin 10 Kd subunit
ARAD_RS04200	SM00904	Riboflavin kinase
ARAD_RS04205	SM00387	Histidine kinase-like ATPases
ARAD_RS04205	SM01049	ARAD_RS04205
ARAD_RS04210	SM00421	helix_turn_helix, Lux Regulon
ARAD_RS04210	SM00448	cheY-homologous receiver domain
ARAD_RS04295	SM00853	MutL C terminal dimerisation domain
ARAD_RS04295	SM01340	ARAD_RS04295
ARAD_RS04300	SM00091	PAS domain
ARAD_RS04300	SM00448	cheY-homologous receiver domain
ARAD_RS04305	SM00052	Putative diguanylate phosphodiesterase
ARAD_RS04305	SM00267	diguanylate cyclase
ARAD_RS04310	SM00344	helix_turn_helix ASNC type
ARAD_RS04340	SM00822	ARAD_RS04340
ARAD_RS04345	SM00346	helix_turn_helix isocitrate lyase regulation
ARAD_RS04350	SM00421	helix_turn_helix, Lux Regulon
ARAD_RS04410	SM00729	Elongator protein 3, MiaB family, Radical SAM
ARAD_RS04425	SM00852	Probable molybdopterin binding domain
ARAD_RS04435	SM00028	Tetratricopeptide repeats
ARAD_RS04460	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS04530	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ARAD_RS04530	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ARAD_RS04530	SM01049	ARAD_RS04530
ARAD_RS04540	SM01209	ARAD_RS04540
ARAD_RS04540	SM01210	ARAD_RS04540
ARAD_RS04545	SM00316	Ribosomal protein S1-like RNA-binding domain
ARAD_RS04545	SM00732	Likely ribonuclease with RNase H fold.
ARAD_RS04585	SM00843	ARAD_RS04585
ARAD_RS04650	SM00363	S4 RNA-binding domain
ARAD_RS04655	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ARAD_RS04655	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ARAD_RS04660	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
ARAD_RS04660	SM00267	diguanylate cyclase
ARAD_RS04665	SM00861	Transketolase, pyrimidine binding domain
ARAD_RS04700	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS04725	SM00855	Phosphoglycerate mutase family
ARAD_RS04735	SM00271	DnaJ molecular chaperone homology domain
ARAD_RS04805	SM00849	Metallo-beta-lactamase superfamily
ARAD_RS04810	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ARAD_RS04860	SM00886	Stress responsive A/B Barrel Domain
ARAD_RS04875	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS04905	SM00052	Putative diguanylate phosphodiesterase
ARAD_RS04905	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
ARAD_RS04905	SM00267	diguanylate cyclase
ARAD_RS04935	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ARAD_RS04935	SM00895	ARAD_RS04935
ARAD_RS04955	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ARAD_RS04985	SM00478	endonuclease III
ARAD_RS05005	SM00116	Domain in cystathionine beta-synthase and other proteins.
ARAD_RS05005	SM01091	Transporter associated domain
ARAD_RS05010	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS05040	SM00849	Metallo-beta-lactamase superfamily
ARAD_RS05105	SM00710	Parallel beta-helix repeats
ARAD_RS05305	SM00052	Putative diguanylate phosphodiesterase
ARAD_RS05305	SM00267	diguanylate cyclase
ARAD_RS05310	SM00829	Enoylreductase
ARAD_RS05330	SM00420	helix_turn_helix, Deoxyribose operon repressor
ARAD_RS05330	SM01134	ARAD_RS05330
ARAD_RS05385	SM00878	Biotin carboxylase C-terminal domain
ARAD_RS05400	SM00710	Parallel beta-helix repeats
ARAD_RS05450	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS05465	SM00953	ARAD_RS05465
ARAD_RS05470	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS05515	SM00829	Enoylreductase
ARAD_RS05545	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS05570	SM00357	Cold shock protein domain
ARAD_RS05585	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS05590	SM00822	ARAD_RS05590
ARAD_RS05680	SM00271	DnaJ molecular chaperone homology domain
ARAD_RS05765	SM00387	Histidine kinase-like ATPases
ARAD_RS05765	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS05810	SM00886	Stress responsive A/B Barrel Domain
ARAD_RS05820	SM00448	cheY-homologous receiver domain
ARAD_RS05820	SM00862	Transcriptional regulatory protein, C terminal
ARAD_RS05825	SM00387	Histidine kinase-like ATPases
ARAD_RS05825	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS05855	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ARAD_RS05860	SM00448	cheY-homologous receiver domain
ARAD_RS05860	SM00862	Transcriptional regulatory protein, C terminal
ARAD_RS05865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ARAD_RS05865	SM00387	Histidine kinase-like ATPases
ARAD_RS05865	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS05875	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
ARAD_RS05875	SM00387	Histidine kinase-like ATPases
ARAD_RS05875	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS05900	SM00986	Uracil DNA glycosylase superfamily
ARAD_RS05900	SM00987	UreE urease accessory protein, C-terminal domain 
ARAD_RS05940	SM00344	helix_turn_helix ASNC type
ARAD_RS05945	SM00116	Domain in cystathionine beta-synthase and other proteins.
ARAD_RS05945	SM00924	MgtE intracellular N domain
ARAD_RS05950	SM00829	Enoylreductase
ARAD_RS05965	SM00046	Diacylglycerol kinase catalytic domain (presumed)
ARAD_RS05970	SM01230	ARAD_RS05970
ARAD_RS06110	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ARAD_RS06135	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ARAD_RS06165	SM01130	ARAD_RS06165
ARAD_RS06180	SM01409	ARAD_RS06180
ARAD_RS06185	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ARAD_RS06185	SM00954	Region found in RelA / SpoT proteins
ARAD_RS06205	SM00358	Double-stranded RNA binding motif
ARAD_RS06205	SM00535	Ribonuclease III family
ARAD_RS06230	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ARAD_RS06250	SM00054	EF-hand, calcium binding motif
ARAD_RS06310	SM00014	Acid phosphatase homologues
ARAD_RS06315	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS06335	SM00917	LeuA allosteric (dimerisation) domain
ARAD_RS06380	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS06390	SM01005	Alanine racemase, C-terminal domain
ARAD_RS06395	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS06400	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS06460	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
ARAD_RS06465	SM00822	ARAD_RS06465
ARAD_RS06470	SM00823	Phosphopantetheine attachment site
ARAD_RS06475	SM00825	Beta-ketoacyl synthase
ARAD_RS06490	SM00072	Guanylate kinase homologues.
ARAD_RS06495	SM00650	Ribosomal RNA adenine dimethylases
ARAD_RS06575	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS06590	SM00562	ARAD_RS06590
ARAD_RS06625	SM00278	Helix-hairpin-helix DNA-binding motif class 1
ARAD_RS06625	SM00465	GIY-YIG type nucleases (URI domain)
ARAD_RS06650	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
ARAD_RS06700	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
ARAD_RS06705	SM00474	3'-5' exonuclease
ARAD_RS06740	SM00434	DNA Topoisomerase IV
ARAD_RS06750	SM00966	SpoVT / AbrB like domain 
ARAD_RS06770	SM01004	Delta-aminolevulinic acid dehydratase
ARAD_RS06780	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS06865	SM00411	bacterial (prokaryotic) histone like domain
ARAD_RS06870	SM00422	helix_turn_helix, mercury resistance
ARAD_RS06985	SM00859	Semialdehyde dehydrogenase, NAD binding domain
ARAD_RS07025	SM00881	CoA binding domain
ARAD_RS07060	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS07070	SM00267	diguanylate cyclase
ARAD_RS07080	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS07080	SM00994	ClpX C4-type zinc finger
ARAD_RS07080	SM01086	C-terminal, D2-small domain, of ClpB protein
ARAD_RS07085	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS07085	SM00464	Found in ATP-dependent protease La (LON)
ARAD_RS07090	SM00411	bacterial (prokaryotic) histone like domain
ARAD_RS07125	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
ARAD_RS07175	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
ARAD_RS07185	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
ARAD_RS07230	SM00849	Metallo-beta-lactamase superfamily
ARAD_RS07255	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS07270	SM00481	DNA polymerase alpha chain like domain
ARAD_RS07280	SM00028	Tetratricopeptide repeats
ARAD_RS07305	SM00448	cheY-homologous receiver domain
ARAD_RS07310	SM00267	diguanylate cyclase
ARAD_RS07310	SM00448	cheY-homologous receiver domain
ARAD_RS07335	SM00316	Ribosomal protein S1-like RNA-binding domain
ARAD_RS07335	SM00955	ARAD_RS07335
ARAD_RS07340	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
ARAD_RS07340	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
ARAD_RS07340	SM00493	ARAD_RS07340
ARAD_RS07350	SM01207	ARAD_RS07350
ARAD_RS07400	SM00732	Likely ribonuclease with RNase H fold.
ARAD_RS07405	SM00849	Metallo-beta-lactamase superfamily
ARAD_RS07440	SM00845	GatB domain
ARAD_RS07480	SM00878	Biotin carboxylase C-terminal domain
ARAD_RS07510	SM00646	ARAD_RS07510
ARAD_RS07520	SM00937	ARAD_RS07520
ARAD_RS07555	SM00967	RNA 2'-O ribose methyltransferase substrate binding
ARAD_RS07615	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
ARAD_RS07615	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
ARAD_RS07620	SM00649	Ribosomal protein L11/L12
ARAD_RS07645	SM00663	RNA polymerase I subunit A N-terminus
ARAD_RS07665	SM00838	Elongation factor G C-terminus
ARAD_RS07665	SM00889	Elongation factor G, domain IV
ARAD_RS07675	SM01403	ARAD_RS07675
ARAD_RS07695	SM01382	ARAD_RS07695
ARAD_RS07695	SM01383	ARAD_RS07695
ARAD_RS07710	SM00322	K homology RNA-binding domain
ARAD_RS07730	SM01374	ARAD_RS07730
ARAD_RS07735	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
ARAD_RS07800	SM00662	RNA polymerases D
ARAD_RS07820	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS07860	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ARAD_RS07865	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS07885	SM01130	ARAD_RS07885
ARAD_RS07900	SM00421	helix_turn_helix, Lux Regulon
ARAD_RS07930	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS07935	SM01091	Transporter associated domain
ARAD_RS07960	SM00422	helix_turn_helix, mercury resistance
ARAD_RS07975	SM00903	Flavin reductase like domain
ARAD_RS08000	SM00852	Probable molybdopterin binding domain
ARAD_RS08045	SM00822	ARAD_RS08045
ARAD_RS08080	SM00344	helix_turn_helix ASNC type
ARAD_RS08085	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
ARAD_RS08085	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
ARAD_RS08100	SM00450	Rhodanese Homology Domain
ARAD_RS08105	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
ARAD_RS08120	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS08145	SM01266	ARAD_RS08145
ARAD_RS08215	SM00671	Sel1-like repeats.
ARAD_RS08230	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ARAD_RS08235	SM00836	DALR anticodon binding domain
ARAD_RS08235	SM01016	Arginyl tRNA synthetase N terminal dom
ARAD_RS08290	SM00257	Lysin motif
ARAD_RS08300	SM01323	ARAD_RS08300
ARAD_RS08415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ARAD_RS08415	SM00895	ARAD_RS08415
ARAD_RS08430	SM00062	Bacterial periplasmic substrate-binding proteins
ARAD_RS08460	SM00903	Flavin reductase like domain
ARAD_RS08475	SM00860	SMI1 / KNR4 family
ARAD_RS08510	SM00357	Cold shock protein domain
ARAD_RS08540	SM00344	helix_turn_helix ASNC type
ARAD_RS08550	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS08565	SM00062	Bacterial periplasmic substrate-binding proteins
ARAD_RS08595	SM00971	Serine acetyltransferase, N-terminal
ARAD_RS08615	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS08615	SM01086	C-terminal, D2-small domain, of ClpB protein
ARAD_RS08675	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ARAD_RS08735	SM01192	ARAD_RS08735
ARAD_RS08735	SM01193	ARAD_RS08735
ARAD_RS08750	SM00861	Transketolase, pyrimidine binding domain
ARAD_RS08780	SM00729	Elongator protein 3, MiaB family, Radical SAM
ARAD_RS08815	SM00387	Histidine kinase-like ATPases
ARAD_RS08815	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS08820	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS08820	SM00448	cheY-homologous receiver domain
ARAD_RS08825	SM00091	PAS domain
ARAD_RS08825	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ARAD_RS08825	SM00387	Histidine kinase-like ATPases
ARAD_RS08825	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS08830	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS08830	SM00448	cheY-homologous receiver domain
ARAD_RS08885	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ARAD_RS08885	SM00895	ARAD_RS08885
ARAD_RS09190	SM00829	Enoylreductase
ARAD_RS09195	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS09220	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS09235	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ARAD_RS09235	SM00895	ARAD_RS09235
ARAD_RS09265	SM00487	DEAD-like helicases superfamily
ARAD_RS09265	SM00490	helicase superfamily c-terminal domain
ARAD_RS09275	SM00487	DEAD-like helicases superfamily
ARAD_RS09275	SM00490	helicase superfamily c-terminal domain
ARAD_RS09275	SM00982	ARAD_RS09275
ARAD_RS09275	SM01058	CarD-like/TRCF domain
ARAD_RS09305	SM00992	Hemimethylated DNA-binding protein YccV like
ARAD_RS09310	SM01230	ARAD_RS09310
ARAD_RS09315	SM00938	Nitrogen regulatory protein P-II
ARAD_RS09345	SM00434	DNA Topoisomerase IV
ARAD_RS09410	SM00825	Beta-ketoacyl synthase
ARAD_RS09425	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS09430	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS09460	SM00849	Metallo-beta-lactamase superfamily
ARAD_RS09490	SM00936	Penicillin-binding protein 5, C-terminal domain 
ARAD_RS09525	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS09555	SM00852	Probable molybdopterin binding domain
ARAD_RS09560	SM01350	ARAD_RS09560
ARAD_RS09590	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
ARAD_RS09590	SM01080	ARAD_RS09590
ARAD_RS09605	SM00450	Rhodanese Homology Domain
ARAD_RS09610	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS09635	SM00387	Histidine kinase-like ATPases
ARAD_RS09635	SM00433	TopoisomeraseII
ARAD_RS09660	SM00903	Flavin reductase like domain
ARAD_RS09675	SM00563	Phosphate acyltransferases
ARAD_RS09680	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
ARAD_RS09690	SM01234	ARAD_RS09690
ARAD_RS09715	SM00116	Domain in cystathionine beta-synthase and other proteins.
ARAD_RS09790	SM00422	helix_turn_helix, mercury resistance
ARAD_RS09795	SM00116	Domain in cystathionine beta-synthase and other proteins.
ARAD_RS09795	SM00924	MgtE intracellular N domain
ARAD_RS09820	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS09830	SM00878	Biotin carboxylase C-terminal domain
ARAD_RS09945	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS10010	SM00487	DEAD-like helicases superfamily
ARAD_RS10010	SM00490	helicase superfamily c-terminal domain
ARAD_RS10050	SM00903	Flavin reductase like domain
ARAD_RS10070	SM00998	Adenylosuccinate lyase C-terminus
ARAD_RS10105	SM01211	ARAD_RS10105
ARAD_RS10125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ARAD_RS10195	SM00363	S4 RNA-binding domain
ARAD_RS10195	SM01390	ARAD_RS10195
ARAD_RS10200	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS10230	SM01329	ARAD_RS10230
ARAD_RS10240	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS10240	SM00871	Bacterial transcription activator, effector binding domain
ARAD_RS10245	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
ARAD_RS10250	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS10270	SM00091	PAS domain
ARAD_RS10270	SM00387	Histidine kinase-like ATPases
ARAD_RS10270	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS10270	SM00448	cheY-homologous receiver domain
ARAD_RS10290	SM00855	Phosphoglycerate mutase family
ARAD_RS10315	SM00905	Dihydroneopterin aldolase
ARAD_RS10385	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS10405	SM00354	helix_turn _helix lactose operon repressor
ARAD_RS10410	SM01350	ARAD_RS10410
ARAD_RS10435	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS10460	SM00919	Malic enzyme, NAD binding domain
ARAD_RS10460	SM01274	ARAD_RS10460
ARAD_RS10470	SM00248	ankyrin repeats
ARAD_RS10550	SM00267	diguanylate cyclase
ARAD_RS10565	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS10580	SM00729	Elongator protein 3, MiaB family, Radical SAM
ARAD_RS10590	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ARAD_RS10590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ARAD_RS10620	SM00062	Bacterial periplasmic substrate-binding proteins
ARAD_RS10620	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
ARAD_RS10640	SM00028	Tetratricopeptide repeats
ARAD_RS10650	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ARAD_RS10660	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS10675	SM00062	Bacterial periplasmic substrate-binding proteins
ARAD_RS10685	SM00344	helix_turn_helix ASNC type
ARAD_RS10690	SM00986	Uracil DNA glycosylase superfamily
ARAD_RS10690	SM00987	UreE urease accessory protein, C-terminal domain 
ARAD_RS10695	SM00318	Staphylococcal nuclease homologues
ARAD_RS10700	SM00387	Histidine kinase-like ATPases
ARAD_RS10700	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS10750	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS10775	SM00671	Sel1-like repeats.
ARAD_RS10780	SM00671	Sel1-like repeats.
ARAD_RS10785	SM00671	Sel1-like repeats.
ARAD_RS10805	SM00487	DEAD-like helicases superfamily
ARAD_RS10805	SM00490	helicase superfamily c-terminal domain
ARAD_RS10815	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
ARAD_RS10820	SM00357	Cold shock protein domain
ARAD_RS10850	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS10860	SM00833	Cobalamin synthesis protein cobW C-terminal domain
ARAD_RS10880	SM00829	Enoylreductase
ARAD_RS10885	SM00825	Beta-ketoacyl synthase
ARAD_RS10950	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS11005	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS11040	SM01018	B12 binding domain
ARAD_RS11105	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS11110	SM00267	diguanylate cyclase
ARAD_RS11110	SM00448	cheY-homologous receiver domain
ARAD_RS11120	SM00448	cheY-homologous receiver domain
ARAD_RS11180	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS11205	SM00966	SpoVT / AbrB like domain 
ARAD_RS11235	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS11240	SM00829	Enoylreductase
ARAD_RS11255	SM00344	helix_turn_helix ASNC type
ARAD_RS11265	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS11380	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ARAD_RS11385	SM00244	prohibitin homologues
ARAD_RS11390	SM00244	prohibitin homologues
ARAD_RS11440	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS11445	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS11465	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS11515	SM00062	Bacterial periplasmic substrate-binding proteins
ARAD_RS11530	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS11535	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS11570	SM00465	GIY-YIG type nucleases (URI domain)
ARAD_RS11645	SM00260	Two component signalling adaptor domain
ARAD_RS11660	SM00278	Helix-hairpin-helix DNA-binding motif class 1
ARAD_RS11660	SM00292	breast cancer carboxy-terminal domain
ARAD_RS11660	SM00532	Ligase N family
ARAD_RS11680	SM00864	Tubulin/FtsZ family, GTPase domain
ARAD_RS11680	SM00865	Tubulin/FtsZ family, C-terminal domain
ARAD_RS11685	SM00842	Cell division protein FtsA
ARAD_RS11780	SM00644	ARAD_RS11780
ARAD_RS11785	SM00271	DnaJ molecular chaperone homology domain
ARAD_RS11820	SM00641	Glycosyl hydrolases family 25
ARAD_RS11840	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ARAD_RS11845	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS11905	SM01230	ARAD_RS11905
ARAD_RS11940	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS11955	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ARAD_RS11955	SM00866	ARAD_RS11955
ARAD_RS11970	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS12000	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ARAD_RS12000	SM00866	ARAD_RS12000
ARAD_RS12005	SM01018	B12 binding domain
ARAD_RS12115	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS12180	SM00873	B3/4 domain
ARAD_RS12185	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS12210	SM00829	Enoylreductase
ARAD_RS12220	SM00822	ARAD_RS12220
ARAD_RS12225	SM00341	Helicase and RNase D C-terminal
ARAD_RS12225	SM00487	DEAD-like helicases superfamily
ARAD_RS12225	SM00490	helicase superfamily c-terminal domain
ARAD_RS12225	SM00956	ARAD_RS12225
ARAD_RS12230	SM00400	zinc finger
ARAD_RS12230	SM00493	ARAD_RS12230
ARAD_RS12245	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
ARAD_RS12275	SM00850	LytTr DNA-binding domain
ARAD_RS12280	SM00851	MGS-like domain
ARAD_RS12280	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
ARAD_RS12305	SM00344	helix_turn_helix ASNC type
ARAD_RS12320	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ARAD_RS12370	SM00357	Cold shock protein domain
ARAD_RS12380	SM00849	Metallo-beta-lactamase superfamily
ARAD_RS12395	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS12400	SM00448	cheY-homologous receiver domain
ARAD_RS12400	SM00862	Transcriptional regulatory protein, C terminal
ARAD_RS12405	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ARAD_RS12405	SM00387	Histidine kinase-like ATPases
ARAD_RS12405	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS12460	SM01400	ARAD_RS12460
ARAD_RS12485	SM00052	Putative diguanylate phosphodiesterase
ARAD_RS12485	SM00267	diguanylate cyclase
ARAD_RS12485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ARAD_RS12550	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS12555	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS12685	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS12690	SM00917	LeuA allosteric (dimerisation) domain
ARAD_RS12745	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS12775	SM00421	helix_turn_helix, Lux Regulon
ARAD_RS12815	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS12825	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ARAD_RS12840	SM00642	Alpha-amylase domain
ARAD_RS12860	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS12865	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS12890	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS12980	SM01092	CO dehydrogenase flavoprotein C-terminal domain
ARAD_RS12985	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
ARAD_RS13065	SM00091	PAS domain
ARAD_RS13065	SM00387	Histidine kinase-like ATPases
ARAD_RS13065	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS13065	SM00448	cheY-homologous receiver domain
ARAD_RS13080	SM00487	DEAD-like helicases superfamily
ARAD_RS13080	SM00490	helicase superfamily c-terminal domain
ARAD_RS13105	SM00460	Transglutaminase/protease-like homologues
ARAD_RS13115	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS13140	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS13185	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS13240	SM00014	Acid phosphatase homologues
ARAD_RS13245	SM00448	cheY-homologous receiver domain
ARAD_RS13275	SM00855	Phosphoglycerate mutase family
ARAD_RS13285	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS13290	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ARAD_RS13320	SM00861	Transketolase, pyrimidine binding domain
ARAD_RS13360	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS13390	SM00354	helix_turn _helix lactose operon repressor
ARAD_RS13450	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS13475	SM00448	cheY-homologous receiver domain
ARAD_RS13480	SM00911	HWE histidine kinase
ARAD_RS13515	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS13560	SM00988	UreE urease accessory protein, N-terminal domain
ARAD_RS13565	SM00267	diguanylate cyclase
ARAD_RS13600	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS13605	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS13625	SM00387	Histidine kinase-like ATPases
ARAD_RS13625	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS13625	SM00448	cheY-homologous receiver domain
ARAD_RS13630	SM00421	helix_turn_helix, Lux Regulon
ARAD_RS13630	SM00448	cheY-homologous receiver domain
ARAD_RS13645	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS13650	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS13710	SM00448	cheY-homologous receiver domain
ARAD_RS13710	SM00862	Transcriptional regulatory protein, C terminal
ARAD_RS13715	SM00448	cheY-homologous receiver domain
ARAD_RS13760	SM00788	Adenylosuccinate synthetase
ARAD_RS13775	SM00984	UDP binding domain
ARAD_RS13785	SM00903	Flavin reductase like domain
ARAD_RS13805	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS13880	SM00986	Uracil DNA glycosylase superfamily
ARAD_RS13880	SM00987	UreE urease accessory protein, C-terminal domain 
ARAD_RS13900	SM00420	helix_turn_helix, Deoxyribose operon repressor
ARAD_RS13900	SM01134	ARAD_RS13900
ARAD_RS13915	SM00052	Putative diguanylate phosphodiesterase
ARAD_RS13915	SM00267	diguanylate cyclase
ARAD_RS13965	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS13980	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS13985	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS14000	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
ARAD_RS14005	SM00822	ARAD_RS14005
ARAD_RS14010	SM00822	ARAD_RS14010
ARAD_RS14065	SM00357	Cold shock protein domain
ARAD_RS14085	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ARAD_RS14115	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS14115	SM00930	ARAD_RS14115
ARAD_RS14130	SM00062	Bacterial periplasmic substrate-binding proteins
ARAD_RS14135	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS14145	SM00244	prohibitin homologues
ARAD_RS14370	SM00563	Phosphate acyltransferases
ARAD_RS14410	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS14420	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS14490	SM00729	Elongator protein 3, MiaB family, Radical SAM
ARAD_RS14490	SM00876	Biotin and Thiamin Synthesis associated domain
ARAD_RS14510	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS14525	SM00966	SpoVT / AbrB like domain 
ARAD_RS14580	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ARAD_RS14590	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS14605	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS14610	SM00116	Domain in cystathionine beta-synthase and other proteins.
ARAD_RS14625	SM00861	Transketolase, pyrimidine binding domain
ARAD_RS14630	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
ARAD_RS14640	SM01091	Transporter associated domain
ARAD_RS14685	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS14735	SM00671	Sel1-like repeats.
ARAD_RS14745	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ARAD_RS14760	SM01001	AIR carboxylase
ARAD_RS14775	SM00028	Tetratricopeptide repeats
ARAD_RS14895	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS14895	SM00448	cheY-homologous receiver domain
ARAD_RS14940	SM00257	Lysin motif
ARAD_RS14950	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ARAD_RS14955	SM00244	prohibitin homologues
ARAD_RS14965	SM00116	Domain in cystathionine beta-synthase and other proteins.
ARAD_RS15030	SM00344	helix_turn_helix ASNC type
ARAD_RS15045	SM00100	Cyclic nucleotide-monophosphate binding domain
ARAD_RS15065	SM00448	cheY-homologous receiver domain
ARAD_RS15105	SM00460	Transglutaminase/protease-like homologues
ARAD_RS15115	SM00460	Transglutaminase/protease-like homologues
ARAD_RS15130	SM00642	Alpha-amylase domain
ARAD_RS15150	SM00642	Alpha-amylase domain
ARAD_RS15195	SM00028	Tetratricopeptide repeats
ARAD_RS15205	SM00911	HWE histidine kinase
ARAD_RS15220	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
ARAD_RS15220	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
ARAD_RS15230	SM00052	Putative diguanylate phosphodiesterase
ARAD_RS15230	SM00267	diguanylate cyclase
ARAD_RS15250	SM00354	helix_turn _helix lactose operon repressor
ARAD_RS15255	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS15265	SM00833	Cobalamin synthesis protein cobW C-terminal domain
ARAD_RS15275	SM00971	Serine acetyltransferase, N-terminal
ARAD_RS15330	SM01118	ARAD_RS15330
ARAD_RS15335	SM00880	ARAD_RS15335
ARAD_RS15340	SM00450	Rhodanese Homology Domain
ARAD_RS15345	SM00052	Putative diguanylate phosphodiesterase
ARAD_RS15345	SM00267	diguanylate cyclase
ARAD_RS15385	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS15390	SM00354	helix_turn _helix lactose operon repressor
ARAD_RS15410	SM00354	helix_turn _helix lactose operon repressor
ARAD_RS15430	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS15430	SM00871	Bacterial transcription activator, effector binding domain
ARAD_RS15470	SM00354	helix_turn _helix lactose operon repressor
ARAD_RS15495	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS15555	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ARAD_RS15560	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS15580	SM00346	helix_turn_helix isocitrate lyase regulation
ARAD_RS15625	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS15635	SM00478	endonuclease III
ARAD_RS15635	SM00525	ARAD_RS15635
ARAD_RS15665	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS15695	SM00448	cheY-homologous receiver domain
ARAD_RS15695	SM00862	Transcriptional regulatory protein, C terminal
ARAD_RS15700	SM00387	Histidine kinase-like ATPases
ARAD_RS15700	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS15735	SM00763	PrkA AAA domain
ARAD_RS15760	SM00226	Low molecular weight phosphatase family
ARAD_RS15845	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ARAD_RS15845	SM00895	ARAD_RS15845
ARAD_RS15850	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ARAD_RS15890	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS15910	SM00354	helix_turn _helix lactose operon repressor
ARAD_RS15915	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS15920	SM00135	Low-density lipoprotein-receptor YWTD domain
ARAD_RS15925	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS15940	SM00100	Cyclic nucleotide-monophosphate binding domain
ARAD_RS15965	SM00062	Bacterial periplasmic substrate-binding proteins
ARAD_RS15965	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
ARAD_RS15980	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS15985	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS15990	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS16015	SM00490	helicase superfamily c-terminal domain
ARAD_RS16030	SM00507	HNH nucleases
ARAD_RS16140	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS16140	SM01086	C-terminal, D2-small domain, of ClpB protein
ARAD_RS16155	SM00937	ARAD_RS16155
ARAD_RS16160	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
ARAD_RS16235	SM00957	SecA DEAD-like domain
ARAD_RS16235	SM00958	SecA preprotein cross-linking domain
ARAD_RS16310	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS16340	SM00507	HNH nucleases
ARAD_RS16345	SM00478	endonuclease III
ARAD_RS16375	SM00893	Electron transfer flavoprotein domain
ARAD_RS16380	SM00893	Electron transfer flavoprotein domain
ARAD_RS16415	SM00448	cheY-homologous receiver domain
ARAD_RS16430	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS16445	SM00563	Phosphate acyltransferases
ARAD_RS16485	SM00849	Metallo-beta-lactamase superfamily
ARAD_RS16525	SM00327	von Willebrand factor (vWF) type A domain
ARAD_RS16535	SM00271	DnaJ molecular chaperone homology domain
ARAD_RS16545	SM00116	Domain in cystathionine beta-synthase and other proteins.
ARAD_RS16545	SM01091	Transporter associated domain
ARAD_RS16585	SM00833	Cobalamin synthesis protein cobW C-terminal domain
ARAD_RS16705	SM01092	CO dehydrogenase flavoprotein C-terminal domain
ARAD_RS16710	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
ARAD_RS16740	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS16745	SM00344	helix_turn_helix ASNC type
ARAD_RS16760	SM00260	Two component signalling adaptor domain
ARAD_RS16780	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
ARAD_RS16780	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
ARAD_RS16785	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
ARAD_RS16805	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ARAD_RS16810	SM00822	ARAD_RS16810
ARAD_RS16815	SM00420	helix_turn_helix, Deoxyribose operon repressor
ARAD_RS16815	SM01134	ARAD_RS16815
ARAD_RS16825	SM00422	helix_turn_helix, mercury resistance
ARAD_RS16840	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ARAD_RS16865	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS16895	SM00487	DEAD-like helicases superfamily
ARAD_RS16895	SM00490	helicase superfamily c-terminal domain
ARAD_RS16910	SM00563	Phosphate acyltransferases
ARAD_RS16970	SM00861	Transketolase, pyrimidine binding domain
ARAD_RS16975	SM00881	CoA binding domain
ARAD_RS17105	SM01152	ARAD_RS17105
ARAD_RS17120	SM00838	Elongation factor G C-terminus
ARAD_RS17135	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS17180	SM00226	Low molecular weight phosphatase family
ARAD_RS17195	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS17240	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS17275	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS17275	SM00962	SRP54-type protein, GTPase domain
ARAD_RS17275	SM00963	SRP54-type protein, helical bundle domain
ARAD_RS17280	SM00729	Elongator protein 3, MiaB family, Radical SAM
ARAD_RS17305	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS17305	SM00962	SRP54-type protein, GTPase domain
ARAD_RS17305	SM00963	SRP54-type protein, helical bundle domain
ARAD_RS17310	SM00830	Chorismate mutase type II
ARAD_RS17355	SM00344	helix_turn_helix ASNC type
ARAD_RS17365	SM01266	ARAD_RS17365
ARAD_RS17380	SM00062	Bacterial periplasmic substrate-binding proteins
ARAD_RS17380	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
ARAD_RS17400	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS17430	SM00448	cheY-homologous receiver domain
ARAD_RS17430	SM00862	Transcriptional regulatory protein, C terminal
ARAD_RS17435	SM00100	Cyclic nucleotide-monophosphate binding domain
ARAD_RS17450	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS17450	SM00843	ARAD_RS17450
ARAD_RS17460	SM00938	Nitrogen regulatory protein P-II
ARAD_RS17485	SM00822	ARAD_RS17485
ARAD_RS17495	SM00464	Found in ATP-dependent protease La (LON)
ARAD_RS17520	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS17545	SM00354	helix_turn _helix lactose operon repressor
ARAD_RS17570	SM00448	cheY-homologous receiver domain
ARAD_RS17570	SM00862	Transcriptional regulatory protein, C terminal
ARAD_RS17575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ARAD_RS17575	SM00387	Histidine kinase-like ATPases
ARAD_RS17575	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS17675	SM00387	Histidine kinase-like ATPases
ARAD_RS17675	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS17680	SM00448	cheY-homologous receiver domain
ARAD_RS17680	SM00862	Transcriptional regulatory protein, C terminal
ARAD_RS17695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ARAD_RS17695	SM00866	ARAD_RS17695
ARAD_RS17710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ARAD_RS17735	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS17780	SM00448	cheY-homologous receiver domain
ARAD_RS17780	SM00862	Transcriptional regulatory protein, C terminal
ARAD_RS17785	SM00387	Histidine kinase-like ATPases
ARAD_RS17785	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS17800	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS17815	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS17880	SM00746	metallochaperone-like domain
ARAD_RS17885	SM00422	helix_turn_helix, mercury resistance
ARAD_RS17945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ARAD_RS17945	SM00866	ARAD_RS17945
ARAD_RS17985	SM00529	Helix-turn-helix diphteria tox regulatory element
ARAD_RS18010	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
ARAD_RS18015	SM01092	CO dehydrogenase flavoprotein C-terminal domain
ARAD_RS18035	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS18080	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS18085	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS18120	SM00354	helix_turn _helix lactose operon repressor
ARAD_RS18185	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS18225	SM00841	Elongation factor P, C-terminal
ARAD_RS18225	SM01185	ARAD_RS18225
ARAD_RS18235	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS18270	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ARAD_RS18270	SM00866	ARAD_RS18270
ARAD_RS18300	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS18305	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
ARAD_RS18310	SM00347	helix_turn_helix multiple antibiotic resistance protein
ARAD_RS18330	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS18345	SM01058	CarD-like/TRCF domain
ARAD_RS18355	SM00363	S4 RNA-binding domain
ARAD_RS18360	SM00490	helicase superfamily c-terminal domain
ARAD_RS18370	SM00822	ARAD_RS18370
ARAD_RS18450	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ARAD_RS18465	SM00062	Bacterial periplasmic substrate-binding proteins
ARAD_RS18475	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS18480	SM00235	Zinc-dependent metalloprotease
ARAD_RS18490	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS18495	SM00849	Metallo-beta-lactamase superfamily
ARAD_RS18500	SM00878	Biotin carboxylase C-terminal domain
ARAD_RS18505	SM00421	helix_turn_helix, Lux Regulon
ARAD_RS18510	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS18525	SM01068	Putative carbohydrate binding domain
ARAD_RS18530	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS18540	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS18545	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS18680	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS18735	SM00984	UDP binding domain
ARAD_RS18755	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS18795	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS18840	SM00062	Bacterial periplasmic substrate-binding proteins
ARAD_RS18845	SM00854	Bacterial capsule synthesis protein PGA_cap
ARAD_RS18850	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS18855	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS18860	SM00530	Helix-turn-helix XRE-family like proteins 
ARAD_RS18885	SM00342	helix_turn_helix, arabinose operon control protein
ARAD_RS18995	SM00855	Phosphoglycerate mutase family
ARAD_RS19025	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS19130	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS19165	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
ARAD_RS19190	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS19215	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ARAD_RS19215	SM00245	tail specific protease
ARAD_RS19240	SM00481	DNA polymerase alpha chain like domain
ARAD_RS19280	SM00518	AP endonuclease family 2
ARAD_RS19285	SM01329	ARAD_RS19285
ARAD_RS19290	SM00014	Acid phosphatase homologues
ARAD_RS19295	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ARAD_RS19310	SM00859	Semialdehyde dehydrogenase, NAD binding domain
ARAD_RS19320	SM00947	Carbonic anhydrase
ARAD_RS19340	SM00798	AICARFT/IMPCHase bienzyme
ARAD_RS19340	SM00851	MGS-like domain
ARAD_RS19395	SM00470	ParB-like nuclease domain
ARAD_RS19410	SM01228	ARAD_RS19410
ARAD_RS19420	SM00357	Cold shock protein domain
ARAD_RS19420	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS19420	SM00959	Rho termination factor, N-terminal domain
ARAD_RS20515	SM00474	3'-5' exonuclease
ARAD_RS20515	SM00479	ARAD_RS20515
ARAD_RS21720	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS22295	SM00388	His Kinase A (phosphoacceptor) domain
ARAD_RS22950	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ARAD_RS23615	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ARAD_RS23785	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ARAD_RS25500	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS27855	SM00490	helicase superfamily c-terminal domain
ARAD_RS27875	SM00490	helicase superfamily c-terminal domain
ARAD_RS31620	SM01086	C-terminal, D2-small domain, of ClpB protein
ARAD_RS31685	SM00490	helicase superfamily c-terminal domain
ARAD_RS31685	SM00847	Helicase associated domain (HA2)  Add an annotation
ARAD_RS31955	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS32440	SM00448	cheY-homologous receiver domain
ARAD_RS33335	SM00382	ATPases associated with a variety of cellular activities
ARAD_RS34040	SM00463	Small MutS-related domain
