B0909_RS00005 SM00382 ATPases associated with a variety of cellular activities B0909_RS00030 SM00354 helix_turn _helix lactose operon repressor B0909_RS00070 SM00382 ATPases associated with a variety of cellular activities B0909_RS00095 SM00354 helix_turn _helix lactose operon repressor B0909_RS00165 SM00345 helix_turn_helix gluconate operon transcriptional repressor B0909_RS00210 SM00342 helix_turn_helix, arabinose operon control protein B0909_RS00240 SM00448 cheY-homologous receiver domain B0909_RS00240 SM00862 Transcriptional regulatory protein, C terminal B0909_RS00245 SM00387 Histidine kinase-like ATPases B0909_RS00245 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS00260 SM00448 cheY-homologous receiver domain B0909_RS00260 SM00862 Transcriptional regulatory protein, C terminal B0909_RS00265 SM00387 Histidine kinase-like ATPases B0909_RS00265 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS00280 SM00347 helix_turn_helix multiple antibiotic resistance protein B0909_RS00285 SM00903 Flavin reductase like domain B0909_RS00360 SM00382 ATPases associated with a variety of cellular activities B0909_RS00365 SM00382 ATPases associated with a variety of cellular activities B0909_RS00395 SM00382 ATPases associated with a variety of cellular activities B0909_RS00415 SM00345 helix_turn_helix gluconate operon transcriptional repressor B0909_RS00415 SM00895 B0909_RS00415 B0909_RS00420 SM01130 B0909_RS00420 B0909_RS00455 SM00903 Flavin reductase like domain B0909_RS00465 SM01002 Alanine dehydrogenase/PNT, C-terminal domain B0909_RS00465 SM01003 Alanine dehydrogenase/PNT, N-terminal domain B0909_RS00480 SM00859 Semialdehyde dehydrogenase, NAD binding domain B0909_RS00490 SM00947 Carbonic anhydrase B0909_RS00500 SM00155 Phospholipase D. Active site motifs. B0909_RS00565 SM00382 ATPases associated with a variety of cellular activities B0909_RS00615 SM00448 cheY-homologous receiver domain B0909_RS00615 SM00862 Transcriptional regulatory protein, C terminal B0909_RS00620 SM00387 Histidine kinase-like ATPases B0909_RS00620 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS00660 SM00382 ATPases associated with a variety of cellular activities B0909_RS00675 SM00986 Uracil DNA glycosylase superfamily B0909_RS00675 SM00987 UreE urease accessory protein, C-terminal domain B0909_RS00710 SM00788 Adenylosuccinate synthetase B0909_RS00730 SM00363 S4 RNA-binding domain B0909_RS00775 SM00448 cheY-homologous receiver domain B0909_RS00775 SM00862 Transcriptional regulatory protein, C terminal B0909_RS00820 SM00382 ATPases associated with a variety of cellular activities B0909_RS00825 SM00382 ATPases associated with a variety of cellular activities B0909_RS00850 SM00421 helix_turn_helix, Lux Regulon B0909_RS00850 SM00448 cheY-homologous receiver domain B0909_RS00855 SM00387 Histidine kinase-like ATPases B0909_RS00855 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS00855 SM00448 cheY-homologous receiver domain B0909_RS00865 SM01230 B0909_RS00865 B0909_RS00895 SM00465 GIY-YIG type nucleases (URI domain) B0909_RS00900 SM00382 ATPases associated with a variety of cellular activities B0909_RS00960 SM00988 UreE urease accessory protein, N-terminal domain B0909_RS00975 SM00849 Metallo-beta-lactamase superfamily B0909_RS00980 SM00100 Cyclic nucleotide-monophosphate binding domain B0909_RS00980 SM00419 helix_turn_helix, cAMP Regulatory protein B0909_RS01015 SM00382 ATPases associated with a variety of cellular activities B0909_RS01095 SM00633 Glycosyl hydrolase family 10 B0909_RS01115 SM00382 ATPases associated with a variety of cellular activities B0909_RS01120 SM00062 Bacterial periplasmic substrate-binding proteins B0909_RS01150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B0909_RS01150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B0909_RS01165 SM00530 Helix-turn-helix XRE-family like proteins B0909_RS01175 SM00382 ATPases associated with a variety of cellular activities B0909_RS01275 SM00857 Resolvase, N terminal domain B0909_RS01290 SM00347 helix_turn_helix multiple antibiotic resistance protein B0909_RS01320 SM00382 ATPases associated with a variety of cellular activities B0909_RS01355 SM00460 Transglutaminase/protease-like homologues B0909_RS01390 SM00487 DEAD-like helicases superfamily B0909_RS01390 SM00490 helicase superfamily c-terminal domain B0909_RS01395 SM00091 PAS domain B0909_RS01395 SM00387 Histidine kinase-like ATPases B0909_RS01395 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS01395 SM00448 cheY-homologous receiver domain B0909_RS01500 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain B0909_RS01510 SM01092 CO dehydrogenase flavoprotein C-terminal domain B0909_RS01515 SM00822 B0909_RS01515 B0909_RS01585 SM00642 Alpha-amylase domain B0909_RS01600 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B0909_RS01635 SM00421 helix_turn_helix, Lux Regulon B0909_RS01665 SM00382 ATPases associated with a variety of cellular activities B0909_RS01675 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B0909_RS01750 SM00917 LeuA allosteric (dimerisation) domain B0909_RS01780 SM00849 Metallo-beta-lactamase superfamily B0909_RS01870 SM00382 ATPases associated with a variety of cellular activities B0909_RS01880 SM00382 ATPases associated with a variety of cellular activities B0909_RS01885 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B0909_RS01885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B0909_RS01950 SM00062 Bacterial periplasmic substrate-binding proteins B0909_RS01955 SM00052 Putative diguanylate phosphodiesterase B0909_RS01955 SM00091 PAS domain B0909_RS01955 SM00267 diguanylate cyclase B0909_RS01955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B0909_RS01965 SM00052 Putative diguanylate phosphodiesterase B0909_RS01965 SM00267 diguanylate cyclase B0909_RS01980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B0909_RS01980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B0909_RS01990 SM01259 B0909_RS01990 B0909_RS02005 SM01400 B0909_RS02005 B0909_RS02055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B0909_RS02055 SM00387 Histidine kinase-like ATPases B0909_RS02055 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS02060 SM00448 cheY-homologous receiver domain B0909_RS02060 SM00862 Transcriptional regulatory protein, C terminal B0909_RS02065 SM00347 helix_turn_helix multiple antibiotic resistance protein B0909_RS02075 SM00849 Metallo-beta-lactamase superfamily B0909_RS02080 SM00357 Cold shock protein domain B0909_RS02100 SM00052 Putative diguanylate phosphodiesterase B0909_RS02145 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B0909_RS02160 SM00344 helix_turn_helix ASNC type B0909_RS02175 SM00729 Elongator protein 3, MiaB family, Radical SAM B0909_RS02180 SM00986 Uracil DNA glycosylase superfamily B0909_RS02180 SM00987 UreE urease accessory protein, C-terminal domain B0909_RS02185 SM00267 diguanylate cyclase B0909_RS02195 SM00851 MGS-like domain B0909_RS02195 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain B0909_RS02200 SM00850 LytTr DNA-binding domain B0909_RS02220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B0909_RS02220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B0909_RS02235 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain B0909_RS02245 SM00400 zinc finger B0909_RS02245 SM00493 B0909_RS02245 B0909_RS02265 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. B0909_RS02265 SM00448 cheY-homologous receiver domain B0909_RS02265 SM00911 HWE histidine kinase B0909_RS02315 SM01018 B12 binding domain B0909_RS02325 SM00382 ATPases associated with a variety of cellular activities B0909_RS02335 SM00829 Enoylreductase B0909_RS02340 SM00382 ATPases associated with a variety of cellular activities B0909_RS02380 SM01230 B0909_RS02380 B0909_RS02455 SM00382 ATPases associated with a variety of cellular activities B0909_RS02460 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B0909_RS02475 SM00641 Glycosyl hydrolases family 25 B0909_RS02505 SM00271 DnaJ molecular chaperone homology domain B0909_RS02510 SM00644 B0909_RS02510 B0909_RS02605 SM00267 diguanylate cyclase B0909_RS02625 SM00842 Cell division protein FtsA B0909_RS02630 SM00864 Tubulin/FtsZ family, GTPase domain B0909_RS02630 SM00865 Tubulin/FtsZ family, C-terminal domain B0909_RS02650 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B0909_RS02650 SM00292 breast cancer carboxy-terminal domain B0909_RS02650 SM00532 Ligase N family B0909_RS02675 SM00479 B0909_RS02675 B0909_RS02685 SM00260 Two component signalling adaptor domain B0909_RS02825 SM00244 prohibitin homologues B0909_RS02830 SM00244 prohibitin homologues B0909_RS02835 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B0909_RS02840 SM00822 B0909_RS02840 B0909_RS02875 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B0909_RS02910 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B0909_RS02935 SM00421 helix_turn_helix, Lux Regulon B0909_RS02935 SM00422 helix_turn_helix, mercury resistance B0909_RS02950 SM00829 Enoylreductase B0909_RS02955 SM00342 helix_turn_helix, arabinose operon control protein B0909_RS03005 SM00382 ATPases associated with a variety of cellular activities B0909_RS03015 SM00267 diguanylate cyclase B0909_RS03030 SM00271 DnaJ molecular chaperone homology domain B0909_RS03060 SM00487 DEAD-like helicases superfamily B0909_RS03060 SM00490 helicase superfamily c-terminal domain B0909_RS03110 SM00967 RNA 2'-O ribose methyltransferase substrate binding B0909_RS03135 SM00382 ATPases associated with a variety of cellular activities B0909_RS03175 SM00855 Phosphoglycerate mutase family B0909_RS03190 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. B0909_RS03190 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. B0909_RS03195 SM00649 Ribosomal protein L11/L12 B0909_RS03220 SM00663 RNA polymerase I subunit A N-terminus B0909_RS03225 SM00421 helix_turn_helix, Lux Regulon B0909_RS03250 SM00838 Elongation factor G C-terminus B0909_RS03250 SM00889 Elongation factor G, domain IV B0909_RS03260 SM01403 B0909_RS03260 B0909_RS03280 SM01382 B0909_RS03280 B0909_RS03280 SM01383 B0909_RS03280 B0909_RS03295 SM00322 K homology RNA-binding domain B0909_RS03315 SM01374 B0909_RS03315 B0909_RS03320 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. B0909_RS03385 SM00662 RNA polymerases D B0909_RS03425 SM00347 helix_turn_helix multiple antibiotic resistance protein B0909_RS03435 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B0909_RS03440 SM00382 ATPases associated with a variety of cellular activities B0909_RS03450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B0909_RS03450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B0909_RS03450 SM01049 B0909_RS03450 B0909_RS03475 SM00382 ATPases associated with a variety of cellular activities B0909_RS03500 SM00861 Transketolase, pyrimidine binding domain B0909_RS03520 SM00382 ATPases associated with a variety of cellular activities B0909_RS03560 SM00387 Histidine kinase-like ATPases B0909_RS03560 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS03565 SM00318 Staphylococcal nuclease homologues B0909_RS03570 SM00986 Uracil DNA glycosylase superfamily B0909_RS03570 SM00987 UreE urease accessory protein, C-terminal domain B0909_RS03575 SM00344 helix_turn_helix ASNC type B0909_RS03580 SM00062 Bacterial periplasmic substrate-binding proteins B0909_RS03585 SM00028 Tetratricopeptide repeats B0909_RS03605 SM00062 Bacterial periplasmic substrate-binding proteins B0909_RS03605 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. B0909_RS03625 SM00382 ATPases associated with a variety of cellular activities B0909_RS03630 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B0909_RS03655 SM01329 B0909_RS03655 B0909_RS03695 SM00382 ATPases associated with a variety of cellular activities B0909_RS03705 SM00363 S4 RNA-binding domain B0909_RS03705 SM01390 B0909_RS03705 B0909_RS03760 SM00345 helix_turn_helix gluconate operon transcriptional repressor B0909_RS03775 SM01211 B0909_RS03775 B0909_RS03795 SM00998 Adenylosuccinate lyase C-terminus B0909_RS03820 SM00487 DEAD-like helicases superfamily B0909_RS03820 SM00490 helicase superfamily c-terminal domain B0909_RS03875 SM00382 ATPases associated with a variety of cellular activities B0909_RS03920 SM00382 ATPases associated with a variety of cellular activities B0909_RS03980 SM00357 Cold shock protein domain B0909_RS04045 SM00382 ATPases associated with a variety of cellular activities B0909_RS04065 SM00345 helix_turn_helix gluconate operon transcriptional repressor B0909_RS04065 SM00895 B0909_RS04065 B0909_RS04105 SM00487 DEAD-like helicases superfamily B0909_RS04105 SM00490 helicase superfamily c-terminal domain B0909_RS04115 SM00487 DEAD-like helicases superfamily B0909_RS04115 SM00490 helicase superfamily c-terminal domain B0909_RS04115 SM00982 B0909_RS04115 B0909_RS04115 SM01058 CarD-like/TRCF domain B0909_RS04145 SM00992 Hemimethylated DNA-binding protein YccV like B0909_RS04155 SM01230 B0909_RS04155 B0909_RS04160 SM00938 Nitrogen regulatory protein P-II B0909_RS04170 SM00342 helix_turn_helix, arabinose operon control protein B0909_RS04250 SM00116 Domain in cystathionine beta-synthase and other proteins. B0909_RS04280 SM01234 B0909_RS04280 B0909_RS04290 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B0909_RS04305 SM00903 Flavin reductase like domain B0909_RS04330 SM00382 ATPases associated with a variety of cellular activities B0909_RS04375 SM00852 Probable molybdopterin binding domain B0909_RS04430 SM00671 Sel1-like repeats. B0909_RS04445 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B0909_RS04450 SM00836 DALR anticodon binding domain B0909_RS04450 SM01016 Arginyl tRNA synthetase N terminal dom B0909_RS04505 SM00257 Lysin motif B0909_RS04530 SM00729 Elongator protein 3, MiaB family, Radical SAM B0909_RS04550 SM00267 diguanylate cyclase B0909_RS04555 SM00852 Probable molybdopterin binding domain B0909_RS04740 SM00919 Malic enzyme, NAD binding domain B0909_RS04740 SM01274 B0909_RS04740 B0909_RS04750 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain B0909_RS04760 SM00382 ATPases associated with a variety of cellular activities B0909_RS04835 SM00448 cheY-homologous receiver domain B0909_RS04840 SM00155 Phospholipase D. Active site motifs. B0909_RS04845 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B0909_RS04865 SM00387 Histidine kinase-like ATPases B0909_RS04865 SM00433 TopoisomeraseII B0909_RS04965 SM00100 Cyclic nucleotide-monophosphate binding domain B0909_RS04965 SM00419 helix_turn_helix, cAMP Regulatory protein B0909_RS04970 SM00729 Elongator protein 3, MiaB family, Radical SAM B0909_RS04990 SM00825 Beta-ketoacyl synthase B0909_RS04995 SM00829 Enoylreductase B0909_RS05050 SM00382 ATPases associated with a variety of cellular activities B0909_RS05065 SM00062 Bacterial periplasmic substrate-binding proteins B0909_RS05085 SM00857 Resolvase, N terminal domain B0909_RS05125 SM00857 Resolvase, N terminal domain B0909_RS05260 SM00971 Serine acetyltransferase, N-terminal B0909_RS05290 SM01323 B0909_RS05290 B0909_RS05320 SM00829 Enoylreductase B0909_RS05470 SM00421 helix_turn_helix, Lux Regulon B0909_RS05490 SM00760 Bacterial dnaA protein helix-turn-helix domain B0909_RS05640 SM00530 Helix-turn-helix XRE-family like proteins B0909_RS05785 SM00116 Domain in cystathionine beta-synthase and other proteins. B0909_RS05785 SM00924 MgtE intracellular N domain B0909_RS05790 SM00422 helix_turn_helix, mercury resistance B0909_RS05865 SM01350 B0909_RS05865 B0909_RS05885 SM00354 helix_turn _helix lactose operon repressor B0909_RS05895 SM00382 ATPases associated with a variety of cellular activities B0909_RS05950 SM00116 Domain in cystathionine beta-synthase and other proteins. B0909_RS05960 SM00434 DNA Topoisomerase IV B0909_RS06010 SM00936 Penicillin-binding protein 5, C-terminal domain B0909_RS06035 SM00849 Metallo-beta-lactamase superfamily B0909_RS06280 SM00382 ATPases associated with a variety of cellular activities B0909_RS06280 SM00448 cheY-homologous receiver domain B0909_RS06285 SM00091 PAS domain B0909_RS06285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B0909_RS06285 SM00387 Histidine kinase-like ATPases B0909_RS06285 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS06290 SM00382 ATPases associated with a variety of cellular activities B0909_RS06290 SM00448 cheY-homologous receiver domain B0909_RS06295 SM00387 Histidine kinase-like ATPases B0909_RS06295 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS06330 SM00342 helix_turn_helix, arabinose operon control protein B0909_RS06340 SM00729 Elongator protein 3, MiaB family, Radical SAM B0909_RS06365 SM00861 Transketolase, pyrimidine binding domain B0909_RS06380 SM01192 B0909_RS06380 B0909_RS06380 SM01193 B0909_RS06380 B0909_RS06415 SM00382 ATPases associated with a variety of cellular activities B0909_RS06430 SM00062 Bacterial periplasmic substrate-binding proteins B0909_RS06435 SM00345 helix_turn_helix gluconate operon transcriptional repressor B0909_RS06435 SM00895 B0909_RS06435 B0909_RS06470 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B0909_RS06555 SM00382 ATPases associated with a variety of cellular activities B0909_RS06555 SM01086 C-terminal, D2-small domain, of ClpB protein B0909_RS06565 SM00091 PAS domain B0909_RS06565 SM00387 Histidine kinase-like ATPases B0909_RS06565 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS06565 SM00448 cheY-homologous receiver domain B0909_RS06580 SM00855 Phosphoglycerate mutase family B0909_RS06605 SM00905 Dihydroneopterin aldolase B0909_RS06655 SM00937 B0909_RS06655 B0909_RS06665 SM00646 B0909_RS06665 B0909_RS06695 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B0909_RS06720 SM00878 Biotin carboxylase C-terminal domain B0909_RS06750 SM00845 GatB domain B0909_RS06785 SM00849 Metallo-beta-lactamase superfamily B0909_RS06795 SM00732 Likely ribonuclease with RNase H fold. B0909_RS06845 SM01207 B0909_RS06845 B0909_RS06860 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain B0909_RS06860 SM00437 Bacterial DNA topoisomerase I DNA-binding domain B0909_RS06860 SM00493 B0909_RS06860 B0909_RS06865 SM00316 Ribosomal protein S1-like RNA-binding domain B0909_RS06865 SM00955 B0909_RS06865 B0909_RS06890 SM00267 diguanylate cyclase B0909_RS06890 SM00448 cheY-homologous receiver domain B0909_RS06895 SM00448 cheY-homologous receiver domain B0909_RS06915 SM00481 DNA polymerase alpha chain like domain B0909_RS06920 SM00382 ATPases associated with a variety of cellular activities B0909_RS06940 SM00849 Metallo-beta-lactamase superfamily B0909_RS06985 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region B0909_RS06990 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region B0909_RS07050 SM00411 bacterial (prokaryotic) histone like domain B0909_RS07055 SM00382 ATPases associated with a variety of cellular activities B0909_RS07055 SM00464 Found in ATP-dependent protease La (LON) B0909_RS07070 SM00382 ATPases associated with a variety of cellular activities B0909_RS07070 SM00994 ClpX C4-type zinc finger B0909_RS07070 SM01086 C-terminal, D2-small domain, of ClpB protein B0909_RS07080 SM00267 diguanylate cyclase B0909_RS07105 SM00881 CoA binding domain B0909_RS07130 SM00530 Helix-turn-helix XRE-family like proteins B0909_RS07140 SM00859 Semialdehyde dehydrogenase, NAD binding domain B0909_RS07275 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B0909_RS07280 SM00450 Rhodanese Homology Domain B0909_RS07330 SM00267 diguanylate cyclase B0909_RS07360 SM00382 ATPases associated with a variety of cellular activities B0909_RS07365 SM00382 ATPases associated with a variety of cellular activities B0909_RS07380 SM00422 helix_turn_helix, mercury resistance B0909_RS07405 SM00422 helix_turn_helix, mercury resistance B0909_RS07410 SM00411 bacterial (prokaryotic) histone like domain B0909_RS07495 SM00347 helix_turn_helix multiple antibiotic resistance protein B0909_RS07505 SM01004 Delta-aminolevulinic acid dehydratase B0909_RS07520 SM00966 SpoVT / AbrB like domain B0909_RS07530 SM00434 DNA Topoisomerase IV B0909_RS07545 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B0909_RS07545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B0909_RS07545 SM01358 B0909_RS07545 B0909_RS07565 SM00474 3'-5' exonuclease B0909_RS07575 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain B0909_RS07650 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B0909_RS07685 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B0909_RS07685 SM00465 GIY-YIG type nucleases (URI domain) B0909_RS07720 SM00562 B0909_RS07720 B0909_RS07730 SM00267 diguanylate cyclase B0909_RS07735 SM00382 ATPases associated with a variety of cellular activities B0909_RS07745 SM00421 helix_turn_helix, Lux Regulon B0909_RS07745 SM00448 cheY-homologous receiver domain B0909_RS07750 SM00387 Histidine kinase-like ATPases B0909_RS07750 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS07755 SM00052 Putative diguanylate phosphodiesterase B0909_RS07755 SM00267 diguanylate cyclase B0909_RS07805 SM00650 Ribosomal RNA adenine dimethylases B0909_RS07815 SM00072 Guanylate kinase homologues. B0909_RS07830 SM00825 Beta-ketoacyl synthase B0909_RS07835 SM00823 Phosphopantetheine attachment site B0909_RS07840 SM00822 B0909_RS07840 B0909_RS07845 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. B0909_RS07885 SM00347 helix_turn_helix multiple antibiotic resistance protein B0909_RS07890 SM00382 ATPases associated with a variety of cellular activities B0909_RS07895 SM00382 ATPases associated with a variety of cellular activities B0909_RS07910 SM00342 helix_turn_helix, arabinose operon control protein B0909_RS07915 SM01005 Alanine racemase, C-terminal domain B0909_RS07930 SM00382 ATPases associated with a variety of cellular activities B0909_RS08010 SM00257 Lysin motif B0909_RS08015 SM00382 ATPases associated with a variety of cellular activities B0909_RS08030 SM00267 diguanylate cyclase B0909_RS08030 SM00448 cheY-homologous receiver domain B0909_RS08095 SM00382 ATPases associated with a variety of cellular activities B0909_RS08115 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B0909_RS08140 SM00448 cheY-homologous receiver domain B0909_RS08155 SM00358 Double-stranded RNA binding motif B0909_RS08155 SM00535 Ribonuclease III family B0909_RS08185 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B0909_RS08185 SM00954 Region found in RelA / SpoT proteins B0909_RS08190 SM01409 B0909_RS08190 B0909_RS08200 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B0909_RS08210 SM01130 B0909_RS08210 B0909_RS08315 SM00046 Diacylglycerol kinase catalytic domain (presumed) B0909_RS08325 SM00116 Domain in cystathionine beta-synthase and other proteins. B0909_RS08325 SM00924 MgtE intracellular N domain B0909_RS08345 SM00829 Enoylreductase B0909_RS08360 SM00347 helix_turn_helix multiple antibiotic resistance protein B0909_RS08390 SM00267 diguanylate cyclase B0909_RS08400 SM00986 Uracil DNA glycosylase superfamily B0909_RS08400 SM00987 UreE urease accessory protein, C-terminal domain B0909_RS08425 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) B0909_RS08425 SM00387 Histidine kinase-like ATPases B0909_RS08425 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS08445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B0909_RS08445 SM00387 Histidine kinase-like ATPases B0909_RS08445 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS08450 SM00448 cheY-homologous receiver domain B0909_RS08450 SM00862 Transcriptional regulatory protein, C terminal B0909_RS08455 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B0909_RS08485 SM00387 Histidine kinase-like ATPases B0909_RS08485 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS08490 SM00448 cheY-homologous receiver domain B0909_RS08490 SM00862 Transcriptional regulatory protein, C terminal B0909_RS08595 SM00886 Stress responsive A/B Barrel Domain B0909_RS08640 SM00344 helix_turn_helix ASNC type B0909_RS08655 SM00640 Glycosyl hydrolases family 32 B0909_RS08690 SM00422 helix_turn_helix, mercury resistance B0909_RS08790 SM00387 Histidine kinase-like ATPases B0909_RS08790 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS08810 SM00760 Bacterial dnaA protein helix-turn-helix domain B0909_RS08900 SM00342 helix_turn_helix, arabinose operon control protein B0909_RS08910 SM01130 B0909_RS08910 B0909_RS08940 SM00382 ATPases associated with a variety of cellular activities B0909_RS08965 SM00422 helix_turn_helix, mercury resistance B0909_RS09085 SM00342 helix_turn_helix, arabinose operon control protein B0909_RS09090 SM00822 B0909_RS09090 B0909_RS09130 SM00382 ATPases associated with a variety of cellular activities B0909_RS09150 SM00347 helix_turn_helix multiple antibiotic resistance protein B0909_RS09160 SM00953 B0909_RS09160 B0909_RS09175 SM00347 helix_turn_helix multiple antibiotic resistance protein B0909_RS09225 SM00347 helix_turn_helix multiple antibiotic resistance protein B0909_RS09290 SM00052 Putative diguanylate phosphodiesterase B0909_RS09290 SM00267 diguanylate cyclase B0909_RS09295 SM00829 Enoylreductase B0909_RS09310 SM00382 ATPases associated with a variety of cellular activities B0909_RS09380 SM00849 Metallo-beta-lactamase superfamily B0909_RS09415 SM00968 SMC proteins Flexible Hinge Domain B0909_RS09435 SM00478 endonuclease III B0909_RS09445 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B0909_RS09475 SM00345 helix_turn_helix gluconate operon transcriptional repressor B0909_RS09475 SM00895 B0909_RS09475 B0909_RS09505 SM00052 Putative diguanylate phosphodiesterase B0909_RS09505 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) B0909_RS09505 SM00267 diguanylate cyclase B0909_RS09535 SM00886 Stress responsive A/B Barrel Domain B0909_RS09640 SM00271 DnaJ molecular chaperone homology domain B0909_RS09650 SM00855 Phosphoglycerate mutase family B0909_RS09675 SM00382 ATPases associated with a variety of cellular activities B0909_RS09705 SM00861 Transketolase, pyrimidine binding domain B0909_RS09715 SM00530 Helix-turn-helix XRE-family like proteins B0909_RS09735 SM00344 helix_turn_helix ASNC type B0909_RS09745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B0909_RS09745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B0909_RS09750 SM00363 S4 RNA-binding domain B0909_RS09820 SM00729 Elongator protein 3, MiaB family, Radical SAM B0909_RS09835 SM00422 helix_turn_helix, mercury resistance B0909_RS09895 SM00421 helix_turn_helix, Lux Regulon B0909_RS09900 SM00346 helix_turn_helix isocitrate lyase regulation B0909_RS09925 SM00052 Putative diguanylate phosphodiesterase B0909_RS09925 SM00267 diguanylate cyclase B0909_RS09930 SM00091 PAS domain B0909_RS09930 SM00448 cheY-homologous receiver domain B0909_RS09935 SM00853 MutL C terminal dimerisation domain B0909_RS09935 SM01340 B0909_RS09935 B0909_RS09995 SM00363 S4 RNA-binding domain B0909_RS10015 SM00904 Riboflavin kinase B0909_RS10025 SM00883 Chaperonin 10 Kd subunit B0909_RS10145 SM00345 helix_turn_helix gluconate operon transcriptional repressor B0909_RS10145 SM00895 B0909_RS10145 B0909_RS10215 SM00316 Ribosomal protein S1-like RNA-binding domain B0909_RS10215 SM00732 Likely ribonuclease with RNase H fold. B0909_RS10220 SM01209 B0909_RS10220 B0909_RS10220 SM01210 B0909_RS10220 B0909_RS10230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B0909_RS10230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B0909_RS10230 SM01049 B0909_RS10230 B0909_RS10300 SM00028 Tetratricopeptide repeats B0909_RS10310 SM00852 Probable molybdopterin binding domain B0909_RS10320 SM00829 Enoylreductase B0909_RS10330 SM00116 Domain in cystathionine beta-synthase and other proteins. B0909_RS10330 SM01240 B0909_RS10330 B0909_RS10340 SM00849 Metallo-beta-lactamase superfamily B0909_RS10375 SM00857 Resolvase, N terminal domain B0909_RS10380 SM00421 helix_turn_helix, Lux Regulon B0909_RS10495 SM00091 PAS domain B0909_RS10495 SM00387 Histidine kinase-like ATPases B0909_RS10495 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS10520 SM00382 ATPases associated with a variety of cellular activities B0909_RS10530 SM00530 Helix-turn-helix XRE-family like proteins B0909_RS10565 SM01230 B0909_RS10565 B0909_RS10600 SM00382 ATPases associated with a variety of cellular activities B0909_RS10605 SM00642 Alpha-amylase domain B0909_RS10625 SM00354 helix_turn _helix lactose operon repressor B0909_RS10710 SM00862 Transcriptional regulatory protein, C terminal B0909_RS10785 SM00382 ATPases associated with a variety of cellular activities B0909_RS10820 SM00858 B0909_RS10820 B0909_RS10885 SM00342 helix_turn_helix, arabinose operon control protein B0909_RS10910 SM00226 Low molecular weight phosphatase family B0909_RS10950 SM00387 Histidine kinase-like ATPases B0909_RS10950 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS10950 SM00448 cheY-homologous receiver domain B0909_RS10955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B0909_RS10955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B0909_RS10960 SM00421 helix_turn_helix, Lux Regulon B0909_RS10965 SM00421 helix_turn_helix, Lux Regulon B0909_RS10985 SM00448 cheY-homologous receiver domain B0909_RS10990 SM00448 cheY-homologous receiver domain B0909_RS10995 SM00138 Methyltransferase, chemotaxis proteins B0909_RS11000 SM00073 Histidine Phosphotransfer domain B0909_RS11000 SM00260 Two component signalling adaptor domain B0909_RS11000 SM00387 Histidine kinase-like ATPases B0909_RS11000 SM01231 B0909_RS11000 B0909_RS11005 SM00448 cheY-homologous receiver domain B0909_RS11015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B0909_RS11100 SM00671 Sel1-like repeats. B0909_RS11125 SM00487 DEAD-like helicases superfamily B0909_RS11125 SM00490 helicase superfamily c-terminal domain B0909_RS11175 SM00421 helix_turn_helix, Lux Regulon B0909_RS11175 SM00448 cheY-homologous receiver domain B0909_RS11200 SM00062 Bacterial periplasmic substrate-binding proteins B0909_RS11265 SM00448 cheY-homologous receiver domain B0909_RS11265 SM00862 Transcriptional regulatory protein, C terminal B0909_RS11275 SM00382 ATPases associated with a variety of cellular activities B0909_RS11295 SM00387 Histidine kinase-like ATPases B0909_RS11295 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS11335 SM00342 helix_turn_helix, arabinose operon control protein B0909_RS11355 SM00382 ATPases associated with a variety of cellular activities B0909_RS11435 SM00382 ATPases associated with a variety of cellular activities B0909_RS11465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B0909_RS11465 SM00387 Histidine kinase-like ATPases B0909_RS11470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B0909_RS11470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B0909_RS11520 SM00054 EF-hand, calcium binding motif B0909_RS11540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B0909_RS11540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B0909_RS11605 SM00530 Helix-turn-helix XRE-family like proteins B0909_RS11615 SM01091 Transporter associated domain B0909_RS11630 SM00729 Elongator protein 3, MiaB family, Radical SAM B0909_RS11635 SM00563 Phosphate acyltransferases B0909_RS11655 SM00932 Scaffold protein Nfu/NifU N terminal B0909_RS11680 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B0909_RS11685 SM00533 DNA-binding domain of DNA mismatch repair MUTS family B0909_RS11685 SM00534 ATPase domain of DNA mismatch repair MUTS family B0909_RS11695 SM00387 Histidine kinase-like ATPases B0909_RS11695 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS11695 SM00448 cheY-homologous receiver domain B0909_RS11705 SM00967 RNA 2'-O ribose methyltransferase substrate binding B0909_RS11720 SM00411 bacterial (prokaryotic) histone like domain B0909_RS11740 SM00382 ATPases associated with a variety of cellular activities B0909_RS11780 SM00729 Elongator protein 3, MiaB family, Radical SAM B0909_RS11785 SM00382 ATPases associated with a variety of cellular activities B0909_RS11785 SM00760 Bacterial dnaA protein helix-turn-helix domain B0909_RS11800 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain B0909_RS11800 SM01232 B0909_RS11800 B0909_RS11850 SM00382 ATPases associated with a variety of cellular activities B0909_RS11865 SM00382 ATPases associated with a variety of cellular activities B0909_RS11885 SM01266 B0909_RS11885 B0909_RS11900 SM00480 DNA polymerase III beta subunit B0909_RS11915 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family B0909_RS12020 SM00487 DEAD-like helicases superfamily B0909_RS12020 SM00490 helicase superfamily c-terminal domain B0909_RS12025 SM00487 DEAD-like helicases superfamily B0909_RS12025 SM00490 helicase superfamily c-terminal domain B0909_RS12090 SM00347 helix_turn_helix multiple antibiotic resistance protein B0909_RS12095 SM00345 helix_turn_helix gluconate operon transcriptional repressor B0909_RS12095 SM00895 B0909_RS12095 B0909_RS12100 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain B0909_RS12130 SM00342 helix_turn_helix, arabinose operon control protein B0909_RS12155 SM00873 B3/4 domain B0909_RS12155 SM00874 tRNA synthetase B5 domain B0909_RS12155 SM00896 Ferredoxin-fold anticodon binding domain B0909_RS12210 SM00342 helix_turn_helix, arabinose operon control protein B0909_RS12225 SM00530 Helix-turn-helix XRE-family like proteins B0909_RS12255 SM00342 helix_turn_helix, arabinose operon control protein B0909_RS12275 SM00345 helix_turn_helix gluconate operon transcriptional repressor B0909_RS12285 SM00641 Glycosyl hydrolases family 25 B0909_RS12330 SM00858 B0909_RS12330 B0909_RS12365 SM00028 Tetratricopeptide repeats B0909_RS12390 SM00347 helix_turn_helix multiple antibiotic resistance protein B0909_RS12450 SM00382 ATPases associated with a variety of cellular activities B0909_RS12470 SM01230 B0909_RS12470 B0909_RS12480 SM00382 ATPases associated with a variety of cellular activities B0909_RS12505 SM00851 MGS-like domain B0909_RS12520 SM00345 helix_turn_helix gluconate operon transcriptional repressor B0909_RS12520 SM00866 B0909_RS12520 B0909_RS12545 SM00382 ATPases associated with a variety of cellular activities B0909_RS12550 SM00382 ATPases associated with a variety of cellular activities B0909_RS12560 SM00382 ATPases associated with a variety of cellular activities B0909_RS12590 SM00072 Guanylate kinase homologues. B0909_RS12595 SM00342 helix_turn_helix, arabinose operon control protein B0909_RS12600 SM00421 helix_turn_helix, Lux Regulon B0909_RS12625 SM00345 helix_turn_helix gluconate operon transcriptional repressor B0909_RS12625 SM00866 B0909_RS12625 B0909_RS12630 SM00382 ATPases associated with a variety of cellular activities B0909_RS12640 SM00062 Bacterial periplasmic substrate-binding proteins B0909_RS12675 SM00825 Beta-ketoacyl synthase B0909_RS12755 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain B0909_RS12760 SM01133 B0909_RS12760 B0909_RS12785 SM00382 ATPases associated with a variety of cellular activities B0909_RS12825 SM00271 DnaJ molecular chaperone homology domain B0909_RS12860 SM00382 ATPases associated with a variety of cellular activities B0909_RS12860 SM00448 cheY-homologous receiver domain B0909_RS12865 SM00387 Histidine kinase-like ATPases B0909_RS12865 SM00388 His Kinase A (phosphoacceptor) domain B0909_RS12880 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs B0909_RS12880 SM00474 3'-5' exonuclease B0909_RS12880 SM00475 5'-3' exonuclease B0909_RS12880 SM00479 B0909_RS12880 B0909_RS12880 SM00482 DNA polymerase A domain B0909_RS12885 SM00347 helix_turn_helix multiple antibiotic resistance protein B0909_RS12895 SM00357 Cold shock protein domain B0909_RS12950 SM00382 ATPases associated with a variety of cellular activities B0909_RS12965 SM00493 B0909_RS12965 B0909_RS12985 SM00316 Ribosomal protein S1-like RNA-binding domain B0909_RS12985 SM00322 K homology RNA-binding domain B0909_RS13010 SM01387 B0909_RS13010 B0909_RS13015 SM00316 Ribosomal protein S1-like RNA-binding domain B0909_RS13015 SM00322 K homology RNA-binding domain B0909_RS13035 SM00287 Bacterial SH3 domain homologues B0909_RS13060 SM00382 ATPases associated with a variety of cellular activities B0909_RS13095 SM00382 ATPases associated with a variety of cellular activities B0909_RS13115 SM00341 Helicase and RNase D C-terminal B0909_RS13115 SM00487 DEAD-like helicases superfamily B0909_RS13115 SM00490 helicase superfamily c-terminal domain B0909_RS13115 SM00956 B0909_RS13115 B0909_RS15145 SM00849 Metallo-beta-lactamase superfamily B0909_RS15365 SM01018 B12 binding domain B0909_RS15690 SM00865 Tubulin/FtsZ family, C-terminal domain B0909_RS15865 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B0909_RS16535 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B0909_RS18515 SM00434 DNA Topoisomerase IV B0909_RS18800 SM00091 PAS domain B0909_RS18800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B0909_RS21690 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) B0909_RS21690 SM00267 diguanylate cyclase B0909_RS22825 SM00382 ATPases associated with a variety of cellular activities B0909_RS23115 SM00490 helicase superfamily c-terminal domain B0909_RS23415 SM00387 Histidine kinase-like ATPases B0909_RS23565 SM00354 helix_turn _helix lactose operon repressor B0909_RS23805 SM00387 Histidine kinase-like ATPases B0909_RS23805 SM00388 His Kinase A (phosphoacceptor) domain