At1D1609_RS00025	SM00479	At1D1609_RS00025
At1D1609_RS00040	SM00978	At1D1609_RS00040
At1D1609_RS00045	SM00925	MltA specific insert domain
At1D1609_RS00050	SM00463	Small MutS-related domain
At1D1609_RS00055	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS00060	SM00387	Histidine kinase-like ATPases
At1D1609_RS00060	SM00433	TopoisomeraseII
At1D1609_RS00135	SM00387	Histidine kinase-like ATPases
At1D1609_RS00135	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS00145	SM00996	S-adenosyl-L-homocysteine hydrolase
At1D1609_RS00145	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
At1D1609_RS00165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS00165	SM00387	Histidine kinase-like ATPases
At1D1609_RS00165	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS00170	SM00448	cheY-homologous receiver domain
At1D1609_RS00170	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS00225	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS00225	SM01086	C-terminal, D2-small domain, of ClpB protein
At1D1609_RS00250	SM00448	cheY-homologous receiver domain
At1D1609_RS00255	SM00387	Histidine kinase-like ATPases
At1D1609_RS00255	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS00260	SM00487	DEAD-like helicases superfamily
At1D1609_RS00260	SM00490	helicase superfamily c-terminal domain
At1D1609_RS00260	SM00847	Helicase associated domain (HA2)  Add an annotation
At1D1609_RS00305	SM00341	Helicase and RNase D C-terminal
At1D1609_RS00305	SM00487	DEAD-like helicases superfamily
At1D1609_RS00305	SM00490	helicase superfamily c-terminal domain
At1D1609_RS00305	SM00956	At1D1609_RS00305
At1D1609_RS00325	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS00360	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS00380	SM00287	Bacterial SH3 domain homologues
At1D1609_RS00400	SM00316	Ribosomal protein S1-like RNA-binding domain
At1D1609_RS00400	SM00322	K homology RNA-binding domain
At1D1609_RS00405	SM01387	At1D1609_RS00405
At1D1609_RS00430	SM00316	Ribosomal protein S1-like RNA-binding domain
At1D1609_RS00430	SM00322	K homology RNA-binding domain
At1D1609_RS00455	SM00493	At1D1609_RS00455
At1D1609_RS00470	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS00525	SM00357	Cold shock protein domain
At1D1609_RS00535	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS00540	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
At1D1609_RS00540	SM00474	3'-5' exonuclease
At1D1609_RS00540	SM00475	5'-3' exonuclease
At1D1609_RS00540	SM00479	At1D1609_RS00540
At1D1609_RS00540	SM00482	DNA polymerase A domain
At1D1609_RS00550	SM00387	Histidine kinase-like ATPases
At1D1609_RS00550	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS00555	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS00555	SM00448	cheY-homologous receiver domain
At1D1609_RS00590	SM00271	DnaJ molecular chaperone homology domain
At1D1609_RS00625	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS00650	SM01133	At1D1609_RS00650
At1D1609_RS00655	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
At1D1609_RS00740	SM00825	Beta-ketoacyl synthase
At1D1609_RS00775	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS00785	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS00790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS00790	SM00866	At1D1609_RS00790
At1D1609_RS00815	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS00820	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS00825	SM00072	Guanylate kinase homologues.
At1D1609_RS00855	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS00865	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS00870	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS00895	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS00895	SM00866	At1D1609_RS00895
At1D1609_RS00910	SM00851	MGS-like domain
At1D1609_RS00935	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS00945	SM01230	At1D1609_RS00945
At1D1609_RS00965	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS01015	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS01040	SM00028	Tetratricopeptide repeats
At1D1609_RS01075	SM00858	At1D1609_RS01075
At1D1609_RS01125	SM00641	Glycosyl hydrolases family 25
At1D1609_RS01135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS01155	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS01185	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS01200	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS01255	SM00873	B3/4 domain
At1D1609_RS01255	SM00874	tRNA synthetase B5 domain
At1D1609_RS01255	SM00896	Ferredoxin-fold anticodon binding domain
At1D1609_RS01280	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS01310	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
At1D1609_RS01315	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS01315	SM00895	At1D1609_RS01315
At1D1609_RS01320	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS01370	SM00829	Enoylreductase
At1D1609_RS01395	SM00829	Enoylreductase
At1D1609_RS01490	SM00470	ParB-like nuclease domain
At1D1609_RS01615	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS01655	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS01790	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
At1D1609_RS01805	SM00480	DNA polymerase III beta subunit
At1D1609_RS01820	SM01266	At1D1609_RS01820
At1D1609_RS01840	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS01855	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS01905	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
At1D1609_RS01905	SM01232	At1D1609_RS01905
At1D1609_RS01920	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS01920	SM00760	Bacterial dnaA protein helix-turn-helix domain
At1D1609_RS01925	SM00729	Elongator protein 3, MiaB family, Radical SAM
At1D1609_RS01965	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS01985	SM00411	bacterial (prokaryotic) histone like domain
At1D1609_RS02000	SM00967	RNA 2'-O ribose methyltransferase substrate binding
At1D1609_RS02010	SM00387	Histidine kinase-like ATPases
At1D1609_RS02010	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS02010	SM00448	cheY-homologous receiver domain
At1D1609_RS02020	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
At1D1609_RS02020	SM00534	ATPase domain of DNA mismatch repair MUTS family
At1D1609_RS02025	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
At1D1609_RS02050	SM00932	Scaffold protein Nfu/NifU N terminal
At1D1609_RS02070	SM00563	Phosphate acyltransferases
At1D1609_RS02075	SM00729	Elongator protein 3, MiaB family, Radical SAM
At1D1609_RS02090	SM01091	Transporter associated domain
At1D1609_RS02100	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS02160	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS02160	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS02180	SM00054	EF-hand, calcium binding motif
At1D1609_RS02225	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS02225	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS02230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS02230	SM00387	Histidine kinase-like ATPases
At1D1609_RS02250	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS02325	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS02345	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS02365	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS02370	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS02405	SM00387	Histidine kinase-like ATPases
At1D1609_RS02405	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS02425	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS02435	SM00448	cheY-homologous receiver domain
At1D1609_RS02435	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS02500	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS02525	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS02525	SM00448	cheY-homologous receiver domain
At1D1609_RS02575	SM00487	DEAD-like helicases superfamily
At1D1609_RS02575	SM00490	helicase superfamily c-terminal domain
At1D1609_RS02600	SM00671	Sel1-like repeats.
At1D1609_RS02655	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS02700	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS02710	SM00448	cheY-homologous receiver domain
At1D1609_RS02715	SM00073	Histidine Phosphotransfer domain
At1D1609_RS02715	SM00260	Two component signalling adaptor domain
At1D1609_RS02715	SM00387	Histidine kinase-like ATPases
At1D1609_RS02715	SM01231	At1D1609_RS02715
At1D1609_RS02720	SM00138	Methyltransferase, chemotaxis proteins 
At1D1609_RS02725	SM00448	cheY-homologous receiver domain
At1D1609_RS02730	SM00448	cheY-homologous receiver domain
At1D1609_RS02750	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS02755	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS02760	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS02760	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS02765	SM00387	Histidine kinase-like ATPases
At1D1609_RS02765	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS02765	SM00448	cheY-homologous receiver domain
At1D1609_RS02805	SM00226	Low molecular weight phosphatase family
At1D1609_RS02900	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS03020	SM00994	ClpX C4-type zinc finger
At1D1609_RS03045	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS03055	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS03155	SM00858	At1D1609_RS03155
At1D1609_RS03185	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS03265	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS03350	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS03370	SM00642	Alpha-amylase domain
At1D1609_RS03375	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS03420	SM01230	At1D1609_RS03420
At1D1609_RS03450	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS03460	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS03480	SM00091	PAS domain
At1D1609_RS03480	SM00387	Histidine kinase-like ATPases
At1D1609_RS03480	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS03505	SM00849	Metallo-beta-lactamase superfamily
At1D1609_RS03515	SM00116	Domain in cystathionine beta-synthase and other proteins.
At1D1609_RS03515	SM01240	At1D1609_RS03515
At1D1609_RS03525	SM00829	Enoylreductase
At1D1609_RS03540	SM00852	Probable molybdopterin binding domain
At1D1609_RS03550	SM00028	Tetratricopeptide repeats
At1D1609_RS03580	SM00966	SpoVT / AbrB like domain 
At1D1609_RS03625	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS03625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS03625	SM01049	At1D1609_RS03625
At1D1609_RS03635	SM01209	At1D1609_RS03635
At1D1609_RS03635	SM01210	At1D1609_RS03635
At1D1609_RS03640	SM00316	Ribosomal protein S1-like RNA-binding domain
At1D1609_RS03640	SM00732	Likely ribonuclease with RNase H fold.
At1D1609_RS03710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS03710	SM00895	At1D1609_RS03710
At1D1609_RS03835	SM00883	Chaperonin 10 Kd subunit
At1D1609_RS03850	SM00904	Riboflavin kinase
At1D1609_RS03870	SM00363	S4 RNA-binding domain
At1D1609_RS03930	SM00853	MutL C terminal dimerisation domain
At1D1609_RS03930	SM01340	At1D1609_RS03930
At1D1609_RS03935	SM00091	PAS domain
At1D1609_RS03935	SM00448	cheY-homologous receiver domain
At1D1609_RS03940	SM00052	Putative diguanylate phosphodiesterase
At1D1609_RS03940	SM00267	diguanylate cyclase
At1D1609_RS03965	SM00346	helix_turn_helix isocitrate lyase regulation
At1D1609_RS03970	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS04035	SM00729	Elongator protein 3, MiaB family, Radical SAM
At1D1609_RS04105	SM00363	S4 RNA-binding domain
At1D1609_RS04110	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS04110	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS04120	SM00344	helix_turn_helix ASNC type
At1D1609_RS04140	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS04150	SM00861	Transketolase, pyrimidine binding domain
At1D1609_RS04180	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS04210	SM00855	Phosphoglycerate mutase family
At1D1609_RS04220	SM00271	DnaJ molecular chaperone homology domain
At1D1609_RS04325	SM00886	Stress responsive A/B Barrel Domain
At1D1609_RS04360	SM00052	Putative diguanylate phosphodiesterase
At1D1609_RS04360	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
At1D1609_RS04360	SM00267	diguanylate cyclase
At1D1609_RS04395	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS04395	SM00895	At1D1609_RS04395
At1D1609_RS04430	SM00478	endonuclease III
At1D1609_RS04430	SM00525	At1D1609_RS04430
At1D1609_RS04450	SM00968	SMC proteins Flexible Hinge Domain
At1D1609_RS04490	SM00849	Metallo-beta-lactamase superfamily
At1D1609_RS04570	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS04595	SM00829	Enoylreductase
At1D1609_RS04600	SM00052	Putative diguanylate phosphodiesterase
At1D1609_RS04600	SM00267	diguanylate cyclase
At1D1609_RS04660	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS04705	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS04720	SM00953	At1D1609_RS04720
At1D1609_RS04725	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS04735	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS04760	SM00822	At1D1609_RS04760
At1D1609_RS04790	SM00822	At1D1609_RS04790
At1D1609_RS04795	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS04830	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS04830	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS04905	SM00422	helix_turn_helix, mercury resistance
At1D1609_RS04935	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS04975	SM01130	At1D1609_RS04975
At1D1609_RS04985	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS05075	SM00760	Bacterial dnaA protein helix-turn-helix domain
At1D1609_RS05095	SM00387	Histidine kinase-like ATPases
At1D1609_RS05095	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS05180	SM00422	helix_turn_helix, mercury resistance
At1D1609_RS05215	SM00640	Glycosyl hydrolases family 32
At1D1609_RS05230	SM00344	helix_turn_helix ASNC type
At1D1609_RS05265	SM00886	Stress responsive A/B Barrel Domain
At1D1609_RS05370	SM00448	cheY-homologous receiver domain
At1D1609_RS05370	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS05375	SM00387	Histidine kinase-like ATPases
At1D1609_RS05375	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS05405	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
At1D1609_RS05410	SM00448	cheY-homologous receiver domain
At1D1609_RS05410	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS05415	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS05415	SM00387	Histidine kinase-like ATPases
At1D1609_RS05415	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS05445	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
At1D1609_RS05445	SM00387	Histidine kinase-like ATPases
At1D1609_RS05445	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS05475	SM00986	Uracil DNA glycosylase superfamily
At1D1609_RS05475	SM00987	UreE urease accessory protein, C-terminal domain 
At1D1609_RS05485	SM00267	diguanylate cyclase
At1D1609_RS05520	SM00829	Enoylreductase
At1D1609_RS05535	SM00116	Domain in cystathionine beta-synthase and other proteins.
At1D1609_RS05535	SM00924	MgtE intracellular N domain
At1D1609_RS05545	SM00046	Diacylglycerol kinase catalytic domain (presumed)
At1D1609_RS05660	SM01130	At1D1609_RS05660
At1D1609_RS05670	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS05680	SM01409	At1D1609_RS05680
At1D1609_RS05685	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
At1D1609_RS05685	SM00954	Region found in RelA / SpoT proteins
At1D1609_RS05715	SM00358	Double-stranded RNA binding motif
At1D1609_RS05715	SM00535	Ribonuclease III family
At1D1609_RS05725	SM00419	helix_turn_helix, cAMP Regulatory protein
At1D1609_RS05730	SM00448	cheY-homologous receiver domain
At1D1609_RS05755	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
At1D1609_RS05775	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS05840	SM00267	diguanylate cyclase
At1D1609_RS05840	SM00448	cheY-homologous receiver domain
At1D1609_RS05855	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS05860	SM00257	Lysin motif
At1D1609_RS05885	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS05940	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS05955	SM01005	Alanine racemase, C-terminal domain
At1D1609_RS05960	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS05975	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS05980	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS06035	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
At1D1609_RS06040	SM00822	At1D1609_RS06040
At1D1609_RS06045	SM00823	Phosphopantetheine attachment site
At1D1609_RS06050	SM00825	Beta-ketoacyl synthase
At1D1609_RS06070	SM00072	Guanylate kinase homologues.
At1D1609_RS06085	SM00650	Ribosomal RNA adenine dimethylases
At1D1609_RS06125	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
At1D1609_RS06125	SM00267	diguanylate cyclase
At1D1609_RS06135	SM00267	diguanylate cyclase
At1D1609_RS06140	SM00052	Putative diguanylate phosphodiesterase
At1D1609_RS06145	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS06150	SM00267	diguanylate cyclase
At1D1609_RS06160	SM00562	At1D1609_RS06160
At1D1609_RS06195	SM00278	Helix-hairpin-helix DNA-binding motif class 1
At1D1609_RS06195	SM00465	GIY-YIG type nucleases (URI domain)
At1D1609_RS06230	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
At1D1609_RS06300	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
At1D1609_RS06310	SM00474	3'-5' exonuclease
At1D1609_RS06340	SM00434	DNA Topoisomerase IV
At1D1609_RS06365	SM01004	Delta-aminolevulinic acid dehydratase
At1D1609_RS06375	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS06455	SM00411	bacterial (prokaryotic) histone like domain
At1D1609_RS06460	SM00422	helix_turn_helix, mercury resistance
At1D1609_RS06490	SM00422	helix_turn_helix, mercury resistance
At1D1609_RS06505	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS06510	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS06540	SM00267	diguanylate cyclase
At1D1609_RS06585	SM00450	Rhodanese Homology Domain
At1D1609_RS06590	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
At1D1609_RS06665	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS06755	SM00859	Semialdehyde dehydrogenase, NAD binding domain
At1D1609_RS06765	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS06800	SM00881	CoA binding domain
At1D1609_RS06825	SM00267	diguanylate cyclase
At1D1609_RS06835	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS06835	SM00994	ClpX C4-type zinc finger
At1D1609_RS06835	SM01086	C-terminal, D2-small domain, of ClpB protein
At1D1609_RS06845	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS06845	SM00464	Found in ATP-dependent protease La (LON)
At1D1609_RS06850	SM00411	bacterial (prokaryotic) histone like domain
At1D1609_RS06910	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
At1D1609_RS06915	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
At1D1609_RS06960	SM00849	Metallo-beta-lactamase superfamily
At1D1609_RS06980	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS06990	SM00481	DNA polymerase alpha chain like domain
At1D1609_RS07010	SM00448	cheY-homologous receiver domain
At1D1609_RS07015	SM00267	diguanylate cyclase
At1D1609_RS07015	SM00448	cheY-homologous receiver domain
At1D1609_RS07045	SM00316	Ribosomal protein S1-like RNA-binding domain
At1D1609_RS07045	SM00955	At1D1609_RS07045
At1D1609_RS07050	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
At1D1609_RS07050	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
At1D1609_RS07050	SM00493	At1D1609_RS07050
At1D1609_RS07065	SM01207	At1D1609_RS07065
At1D1609_RS07115	SM00732	Likely ribonuclease with RNase H fold.
At1D1609_RS07125	SM00849	Metallo-beta-lactamase superfamily
At1D1609_RS07155	SM00845	GatB domain
At1D1609_RS07190	SM00878	Biotin carboxylase C-terminal domain
At1D1609_RS07215	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
At1D1609_RS07245	SM00646	At1D1609_RS07245
At1D1609_RS07305	SM00905	Dihydroneopterin aldolase
At1D1609_RS07330	SM00855	Phosphoglycerate mutase family
At1D1609_RS07350	SM00091	PAS domain
At1D1609_RS07350	SM00387	Histidine kinase-like ATPases
At1D1609_RS07350	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS07350	SM00448	cheY-homologous receiver domain
At1D1609_RS07360	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS07360	SM01086	C-terminal, D2-small domain, of ClpB protein
At1D1609_RS07440	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
At1D1609_RS07475	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS07475	SM00895	At1D1609_RS07475
At1D1609_RS07480	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS07495	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS07535	SM00861	Transketolase, pyrimidine binding domain
At1D1609_RS07545	SM00822	At1D1609_RS07545
At1D1609_RS07565	SM01120	At1D1609_RS07565
At1D1609_RS07585	SM01192	At1D1609_RS07585
At1D1609_RS07585	SM01193	At1D1609_RS07585
At1D1609_RS07600	SM00861	Transketolase, pyrimidine binding domain
At1D1609_RS07625	SM00729	Elongator protein 3, MiaB family, Radical SAM
At1D1609_RS07640	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS07675	SM00387	Histidine kinase-like ATPases
At1D1609_RS07675	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS07680	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS07680	SM00448	cheY-homologous receiver domain
At1D1609_RS07685	SM00091	PAS domain
At1D1609_RS07685	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS07685	SM00387	Histidine kinase-like ATPases
At1D1609_RS07685	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS07690	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS07690	SM00448	cheY-homologous receiver domain
At1D1609_RS07765	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
At1D1609_RS07810	SM00363	S4 RNA-binding domain
At1D1609_RS07890	SM00226	Low molecular weight phosphatase family
At1D1609_RS07895	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
At1D1609_RS07915	SM00849	Metallo-beta-lactamase superfamily
At1D1609_RS07940	SM00936	Penicillin-binding protein 5, C-terminal domain 
At1D1609_RS08060	SM00434	DNA Topoisomerase IV
At1D1609_RS08070	SM00116	Domain in cystathionine beta-synthase and other proteins.
At1D1609_RS08125	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS08135	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS08155	SM01350	At1D1609_RS08155
At1D1609_RS08235	SM00422	helix_turn_helix, mercury resistance
At1D1609_RS08240	SM00116	Domain in cystathionine beta-synthase and other proteins.
At1D1609_RS08240	SM00924	MgtE intracellular N domain
At1D1609_RS08290	SM00829	Enoylreductase
At1D1609_RS08320	SM01323	At1D1609_RS08320
At1D1609_RS08350	SM00971	Serine acetyltransferase, N-terminal
At1D1609_RS08375	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS08390	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS08450	SM00829	Enoylreductase
At1D1609_RS08455	SM00825	Beta-ketoacyl synthase
At1D1609_RS08475	SM00729	Elongator protein 3, MiaB family, Radical SAM
At1D1609_RS08480	SM00100	Cyclic nucleotide-monophosphate binding domain
At1D1609_RS08480	SM00419	helix_turn_helix, cAMP Regulatory protein
At1D1609_RS08575	SM00387	Histidine kinase-like ATPases
At1D1609_RS08575	SM00433	TopoisomeraseII
At1D1609_RS08600	SM00912	haemagglutination activity domain
At1D1609_RS08605	SM00671	Sel1-like repeats.
At1D1609_RS08630	SM00860	SMI1 / KNR4 family
At1D1609_RS08650	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
At1D1609_RS08655	SM00155	Phospholipase D. Active site motifs.
At1D1609_RS08660	SM00448	cheY-homologous receiver domain
At1D1609_RS08740	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS08750	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
At1D1609_RS08760	SM00919	Malic enzyme, NAD binding domain
At1D1609_RS08760	SM01274	At1D1609_RS08760
At1D1609_RS08965	SM00852	Probable molybdopterin binding domain
At1D1609_RS08970	SM00267	diguanylate cyclase
At1D1609_RS08990	SM00729	Elongator protein 3, MiaB family, Radical SAM
At1D1609_RS09015	SM00257	Lysin motif
At1D1609_RS09070	SM00836	DALR anticodon binding domain
At1D1609_RS09070	SM01016	Arginyl tRNA synthetase N terminal dom
At1D1609_RS09075	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
At1D1609_RS09090	SM00671	Sel1-like repeats.
At1D1609_RS09125	SM00974	At1D1609_RS09125
At1D1609_RS09325	SM00760	Bacterial dnaA protein helix-turn-helix domain
At1D1609_RS09405	SM00974	At1D1609_RS09405
At1D1609_RS09485	SM00507	HNH nucleases
At1D1609_RS09540	SM00852	Probable molybdopterin binding domain
At1D1609_RS09585	SM00100	Cyclic nucleotide-monophosphate binding domain
At1D1609_RS09590	SM00287	Bacterial SH3 domain homologues
At1D1609_RS09620	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS09635	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS09665	SM00903	Flavin reductase like domain
At1D1609_RS09680	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
At1D1609_RS09690	SM01234	At1D1609_RS09690
At1D1609_RS09715	SM00116	Domain in cystathionine beta-synthase and other proteins.
At1D1609_RS09790	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS09800	SM00938	Nitrogen regulatory protein P-II
At1D1609_RS09805	SM01230	At1D1609_RS09805
At1D1609_RS09815	SM00992	Hemimethylated DNA-binding protein YccV like
At1D1609_RS09845	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS09855	SM00487	DEAD-like helicases superfamily
At1D1609_RS09855	SM00490	helicase superfamily c-terminal domain
At1D1609_RS09855	SM00982	At1D1609_RS09855
At1D1609_RS09855	SM01058	CarD-like/TRCF domain
At1D1609_RS09865	SM00487	DEAD-like helicases superfamily
At1D1609_RS09865	SM00490	helicase superfamily c-terminal domain
At1D1609_RS09905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS09905	SM00895	At1D1609_RS09905
At1D1609_RS09925	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS09970	SM00357	Cold shock protein domain
At1D1609_RS10075	SM00507	HNH nucleases
At1D1609_RS10135	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS10180	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS10240	SM00487	DEAD-like helicases superfamily
At1D1609_RS10240	SM00490	helicase superfamily c-terminal domain
At1D1609_RS10250	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS10270	SM00998	Adenylosuccinate lyase C-terminus
At1D1609_RS10290	SM01211	At1D1609_RS10290
At1D1609_RS10305	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS10375	SM00363	S4 RNA-binding domain
At1D1609_RS10375	SM01390	At1D1609_RS10375
At1D1609_RS10385	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS10400	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS10435	SM01329	At1D1609_RS10435
At1D1609_RS10445	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
At1D1609_RS10450	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS10475	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS10475	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
At1D1609_RS10495	SM00028	Tetratricopeptide repeats
At1D1609_RS10500	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS10505	SM00344	helix_turn_helix ASNC type
At1D1609_RS10510	SM00986	Uracil DNA glycosylase superfamily
At1D1609_RS10510	SM00987	UreE urease accessory protein, C-terminal domain 
At1D1609_RS10515	SM00318	Staphylococcal nuclease homologues
At1D1609_RS10520	SM00387	Histidine kinase-like ATPases
At1D1609_RS10520	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS10565	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS10590	SM00861	Transketolase, pyrimidine binding domain
At1D1609_RS10620	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS10640	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS10640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS10640	SM01049	At1D1609_RS10640
At1D1609_RS10650	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS10655	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
At1D1609_RS10665	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS10720	SM00662	RNA polymerases D
At1D1609_RS10785	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
At1D1609_RS10790	SM01374	At1D1609_RS10790
At1D1609_RS10810	SM00322	K homology RNA-binding domain
At1D1609_RS10825	SM01382	At1D1609_RS10825
At1D1609_RS10825	SM01383	At1D1609_RS10825
At1D1609_RS10845	SM01403	At1D1609_RS10845
At1D1609_RS10855	SM00838	Elongation factor G C-terminus
At1D1609_RS10855	SM00889	Elongation factor G, domain IV
At1D1609_RS10880	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS10885	SM00663	RNA polymerase I subunit A N-terminus
At1D1609_RS10910	SM00649	Ribosomal protein L11/L12
At1D1609_RS10915	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
At1D1609_RS10915	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
At1D1609_RS10930	SM00855	Phosphoglycerate mutase family
At1D1609_RS10985	SM00387	Histidine kinase-like ATPases
At1D1609_RS10985	SM00448	cheY-homologous receiver domain
At1D1609_RS10990	SM00448	cheY-homologous receiver domain
At1D1609_RS10995	SM00387	Histidine kinase-like ATPases
At1D1609_RS11000	SM00448	cheY-homologous receiver domain
At1D1609_RS11005	SM00448	cheY-homologous receiver domain
At1D1609_RS11005	SM00911	HWE histidine kinase
At1D1609_RS11010	SM00448	cheY-homologous receiver domain
At1D1609_RS11015	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
At1D1609_RS11015	SM00387	Histidine kinase-like ATPases
At1D1609_RS11015	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS11030	SM00967	RNA 2'-O ribose methyltransferase substrate binding
At1D1609_RS11075	SM00487	DEAD-like helicases superfamily
At1D1609_RS11075	SM00490	helicase superfamily c-terminal domain
At1D1609_RS11105	SM00271	DnaJ molecular chaperone homology domain
At1D1609_RS11125	SM00267	diguanylate cyclase
At1D1609_RS11135	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS11185	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS11190	SM00829	Enoylreductase
At1D1609_RS11205	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS11205	SM00422	helix_turn_helix, mercury resistance
At1D1609_RS11230	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
At1D1609_RS11265	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
At1D1609_RS11305	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
At1D1609_RS11310	SM00244	prohibitin homologues
At1D1609_RS11315	SM00244	prohibitin homologues
At1D1609_RS11455	SM00260	Two component signalling adaptor domain
At1D1609_RS11465	SM00479	At1D1609_RS11465
At1D1609_RS11490	SM00278	Helix-hairpin-helix DNA-binding motif class 1
At1D1609_RS11490	SM00292	breast cancer carboxy-terminal domain
At1D1609_RS11490	SM00532	Ligase N family
At1D1609_RS11510	SM00864	Tubulin/FtsZ family, GTPase domain
At1D1609_RS11510	SM00865	Tubulin/FtsZ family, C-terminal domain
At1D1609_RS11515	SM00842	Cell division protein FtsA
At1D1609_RS11535	SM00267	diguanylate cyclase
At1D1609_RS11630	SM00644	At1D1609_RS11630
At1D1609_RS11635	SM00271	DnaJ molecular chaperone homology domain
At1D1609_RS11665	SM00641	Glycosyl hydrolases family 25
At1D1609_RS11680	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
At1D1609_RS11685	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS11755	SM01230	At1D1609_RS11755
At1D1609_RS11795	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS11800	SM00829	Enoylreductase
At1D1609_RS11810	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS11820	SM01018	B12 binding domain
At1D1609_RS11870	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
At1D1609_RS11870	SM00448	cheY-homologous receiver domain
At1D1609_RS11870	SM00911	HWE histidine kinase
At1D1609_RS11885	SM00400	zinc finger
At1D1609_RS11885	SM00493	At1D1609_RS11885
At1D1609_RS11895	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
At1D1609_RS11910	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS11910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS11930	SM00850	LytTr DNA-binding domain
At1D1609_RS11935	SM00851	MGS-like domain
At1D1609_RS11935	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
At1D1609_RS11945	SM00267	diguanylate cyclase
At1D1609_RS11950	SM00986	Uracil DNA glycosylase superfamily
At1D1609_RS11950	SM00987	UreE urease accessory protein, C-terminal domain 
At1D1609_RS11955	SM00729	Elongator protein 3, MiaB family, Radical SAM
At1D1609_RS11970	SM00344	helix_turn_helix ASNC type
At1D1609_RS11985	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
At1D1609_RS12030	SM00052	Putative diguanylate phosphodiesterase
At1D1609_RS12045	SM00357	Cold shock protein domain
At1D1609_RS12050	SM00849	Metallo-beta-lactamase superfamily
At1D1609_RS12065	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS12070	SM00448	cheY-homologous receiver domain
At1D1609_RS12070	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS12075	SM00387	Histidine kinase-like ATPases
At1D1609_RS12075	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS12130	SM01400	At1D1609_RS12130
At1D1609_RS12145	SM01259	At1D1609_RS12145
At1D1609_RS12155	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS12155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS12170	SM00052	Putative diguanylate phosphodiesterase
At1D1609_RS12170	SM00267	diguanylate cyclase
At1D1609_RS12180	SM00052	Putative diguanylate phosphodiesterase
At1D1609_RS12180	SM00091	PAS domain
At1D1609_RS12180	SM00267	diguanylate cyclase
At1D1609_RS12180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS12185	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS12250	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS12255	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS12335	SM00849	Metallo-beta-lactamase superfamily
At1D1609_RS12365	SM00917	LeuA allosteric (dimerisation) domain
At1D1609_RS12445	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
At1D1609_RS12455	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS12485	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS12515	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
At1D1609_RS12535	SM00642	Alpha-amylase domain
At1D1609_RS12610	SM01092	CO dehydrogenase flavoprotein C-terminal domain
At1D1609_RS12620	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
At1D1609_RS12725	SM00091	PAS domain
At1D1609_RS12725	SM00387	Histidine kinase-like ATPases
At1D1609_RS12725	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS12725	SM00448	cheY-homologous receiver domain
At1D1609_RS12730	SM00487	DEAD-like helicases superfamily
At1D1609_RS12730	SM00490	helicase superfamily c-terminal domain
At1D1609_RS12765	SM00460	Transglutaminase/protease-like homologues
At1D1609_RS12785	SM00855	Phosphoglycerate mutase family
At1D1609_RS12800	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS12830	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS12845	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS12845	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS12865	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS12870	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS12890	SM00633	Glycosyl hydrolase family 10
At1D1609_RS12975	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS13015	SM00100	Cyclic nucleotide-monophosphate binding domain
At1D1609_RS13015	SM00419	helix_turn_helix, cAMP Regulatory protein
At1D1609_RS13020	SM00849	Metallo-beta-lactamase superfamily
At1D1609_RS13035	SM00988	UreE urease accessory protein, N-terminal domain
At1D1609_RS13100	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS13140	SM01230	At1D1609_RS13140
At1D1609_RS13150	SM00387	Histidine kinase-like ATPases
At1D1609_RS13150	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS13150	SM00448	cheY-homologous receiver domain
At1D1609_RS13155	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS13155	SM00448	cheY-homologous receiver domain
At1D1609_RS13180	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS13185	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS13230	SM00448	cheY-homologous receiver domain
At1D1609_RS13230	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS13280	SM00363	S4 RNA-binding domain
At1D1609_RS13300	SM00788	Adenylosuccinate synthetase
At1D1609_RS13350	SM00986	Uracil DNA glycosylase superfamily
At1D1609_RS13350	SM00987	UreE urease accessory protein, C-terminal domain 
At1D1609_RS13365	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS13405	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS13410	SM00387	Histidine kinase-like ATPases
At1D1609_RS13410	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS13415	SM00448	cheY-homologous receiver domain
At1D1609_RS13415	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS13460	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS13525	SM00155	Phospholipase D. Active site motifs.
At1D1609_RS13535	SM00947	Carbonic anhydrase
At1D1609_RS13545	SM00859	Semialdehyde dehydrogenase, NAD binding domain
At1D1609_RS13560	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
At1D1609_RS13560	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
At1D1609_RS13570	SM00903	Flavin reductase like domain
At1D1609_RS13605	SM01130	At1D1609_RS13605
At1D1609_RS13610	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS13610	SM00895	At1D1609_RS13610
At1D1609_RS13630	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS13665	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS13670	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS13745	SM00903	Flavin reductase like domain
At1D1609_RS13750	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS13770	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS13790	SM00448	cheY-homologous receiver domain
At1D1609_RS13790	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS13795	SM00387	Histidine kinase-like ATPases
At1D1609_RS13815	SM00387	Histidine kinase-like ATPases
At1D1609_RS13815	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS13820	SM00448	cheY-homologous receiver domain
At1D1609_RS13820	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS13890	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS13900	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS13955	SM00116	Domain in cystathionine beta-synthase and other proteins.
At1D1609_RS13990	SM00100	Cyclic nucleotide-monophosphate binding domain
At1D1609_RS13995	SM00986	Uracil DNA glycosylase superfamily
At1D1609_RS13995	SM00987	UreE urease accessory protein, C-terminal domain 
At1D1609_RS14020	SM00100	Cyclic nucleotide-monophosphate binding domain
At1D1609_RS14070	SM01060	At1D1609_RS14070
At1D1609_RS14125	SM00825	Beta-ketoacyl synthase
At1D1609_RS14130	SM00864	Tubulin/FtsZ family, GTPase domain
At1D1609_RS14130	SM00865	Tubulin/FtsZ family, C-terminal domain
At1D1609_RS14140	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS14220	SM00841	Elongation factor P, C-terminal
At1D1609_RS14220	SM01185	At1D1609_RS14220
At1D1609_RS14270	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS14345	SM00100	Cyclic nucleotide-monophosphate binding domain
At1D1609_RS14350	SM00849	Metallo-beta-lactamase superfamily
At1D1609_RS14355	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
At1D1609_RS14365	SM00984	UDP binding domain
At1D1609_RS14385	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS14455	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS14485	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS14485	SM00866	At1D1609_RS14485
At1D1609_RS14510	SM00014	Acid phosphatase homologues
At1D1609_RS14540	SM00260	Two component signalling adaptor domain
At1D1609_RS14545	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
At1D1609_RS14545	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS14545	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS14560	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS14585	SM00487	DEAD-like helicases superfamily
At1D1609_RS14585	SM00490	helicase superfamily c-terminal domain
At1D1609_RS14630	SM00861	Transketolase, pyrimidine binding domain
At1D1609_RS14635	SM00881	CoA binding domain
At1D1609_RS14745	SM01152	At1D1609_RS14745
At1D1609_RS14760	SM00838	Elongation factor G C-terminus
At1D1609_RS14770	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS14795	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS14830	SM00226	Low molecular weight phosphatase family
At1D1609_RS14845	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS14875	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS14905	SM00267	diguanylate cyclase
At1D1609_RS14920	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS14920	SM00962	SRP54-type protein, GTPase domain
At1D1609_RS14920	SM00963	SRP54-type protein, helical bundle domain
At1D1609_RS14925	SM00729	Elongator protein 3, MiaB family, Radical SAM
At1D1609_RS14945	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS14945	SM00962	SRP54-type protein, GTPase domain
At1D1609_RS14945	SM00963	SRP54-type protein, helical bundle domain
At1D1609_RS14950	SM00830	Chorismate mutase type II
At1D1609_RS14980	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS15020	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS15040	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS15045	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
At1D1609_RS15085	SM00420	helix_turn_helix, Deoxyribose operon repressor
At1D1609_RS15085	SM01134	At1D1609_RS15085
At1D1609_RS15090	SM00878	Biotin carboxylase C-terminal domain
At1D1609_RS15095	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS15100	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS15110	SM01068	Putative carbohydrate binding domain
At1D1609_RS15155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS15155	SM00895	At1D1609_RS15155
At1D1609_RS15215	SM00363	S4 RNA-binding domain
At1D1609_RS15220	SM00490	helicase superfamily c-terminal domain
At1D1609_RS15240	SM00938	Nitrogen regulatory protein P-II
At1D1609_RS15250	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS15250	SM00843	At1D1609_RS15250
At1D1609_RS15265	SM00100	Cyclic nucleotide-monophosphate binding domain
At1D1609_RS15270	SM00448	cheY-homologous receiver domain
At1D1609_RS15270	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS15280	SM01058	CarD-like/TRCF domain
At1D1609_RS15305	SM00822	At1D1609_RS15305
At1D1609_RS15330	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
At1D1609_RS15330	SM00245	tail specific protease
At1D1609_RS15360	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
At1D1609_RS15415	SM01329	At1D1609_RS15415
At1D1609_RS15485	SM00833	Cobalamin synthesis protein cobW C-terminal domain
At1D1609_RS15515	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
At1D1609_RS15555	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS15560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS15560	SM00895	At1D1609_RS15560
At1D1609_RS15565	SM00858	At1D1609_RS15565
At1D1609_RS15570	SM00798	AICARFT/IMPCHase bienzyme
At1D1609_RS15570	SM00851	MGS-like domain
At1D1609_RS15595	SM00470	ParB-like nuclease domain
At1D1609_RS15610	SM01228	At1D1609_RS15610
At1D1609_RS15620	SM00357	Cold shock protein domain
At1D1609_RS15620	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS15620	SM00959	Rho termination factor, N-terminal domain
At1D1609_RS15705	SM00448	cheY-homologous receiver domain
At1D1609_RS15705	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS15710	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS15710	SM00387	Histidine kinase-like ATPases
At1D1609_RS15710	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS15740	SM00387	Histidine kinase-like ATPases
At1D1609_RS15740	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS15745	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS15745	SM00448	cheY-homologous receiver domain
At1D1609_RS15750	SM00448	cheY-homologous receiver domain
At1D1609_RS15760	SM00835	Cupin
At1D1609_RS15850	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS15855	SM00479	At1D1609_RS15855
At1D1609_RS15875	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
At1D1609_RS15875	SM00091	PAS domain
At1D1609_RS15875	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS15900	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS15925	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS15930	SM00813	Alpha-L-arabinofuranosidase C-terminus
At1D1609_RS15935	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
At1D1609_RS15945	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS15970	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS16015	SM00357	Cold shock protein domain
At1D1609_RS16045	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS16065	SM00448	cheY-homologous receiver domain
At1D1609_RS16065	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS16070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS16070	SM00387	Histidine kinase-like ATPases
At1D1609_RS16080	SM00710	Parallel beta-helix repeats
At1D1609_RS16090	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS16105	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS16130	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
At1D1609_RS16135	SM01130	At1D1609_RS16135
At1D1609_RS16155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS16155	SM00895	At1D1609_RS16155
At1D1609_RS16175	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS16195	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS16200	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS16240	SM00858	At1D1609_RS16240
At1D1609_RS16245	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS16285	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS16295	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS16320	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS16320	SM00895	At1D1609_RS16320
At1D1609_RS16340	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS16345	SM00833	Cobalamin synthesis protein cobW C-terminal domain
At1D1609_RS16360	SM00833	Cobalamin synthesis protein cobW C-terminal domain
At1D1609_RS16380	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS16400	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS16430	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS16450	SM00267	diguanylate cyclase
At1D1609_RS16465	SM00052	Putative diguanylate phosphodiesterase
At1D1609_RS16465	SM00267	diguanylate cyclase
At1D1609_RS16475	SM00843	At1D1609_RS16475
At1D1609_RS16495	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS16500	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS16515	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS16540	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS16555	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS16555	SM00895	At1D1609_RS16555
At1D1609_RS16565	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS16570	SM00481	DNA polymerase alpha chain like domain
At1D1609_RS16610	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS16650	SM00052	Putative diguanylate phosphodiesterase
At1D1609_RS16650	SM00267	diguanylate cyclase
At1D1609_RS16650	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS16655	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS16660	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS16690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS16690	SM00895	At1D1609_RS16690
At1D1609_RS16710	SM00829	Enoylreductase
At1D1609_RS16755	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
At1D1609_RS16765	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS16775	SM00346	helix_turn_helix isocitrate lyase regulation
At1D1609_RS16830	SM00869	Autotransporter beta-domain
At1D1609_RS16835	SM00903	Flavin reductase like domain
At1D1609_RS16850	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS16850	SM00866	At1D1609_RS16850
At1D1609_RS16855	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS16915	SM00344	helix_turn_helix ASNC type
At1D1609_RS16920	SM01005	Alanine racemase, C-terminal domain
At1D1609_RS16930	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS16930	SM00895	At1D1609_RS16930
At1D1609_RS16940	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS16940	SM00448	cheY-homologous receiver domain
At1D1609_RS16945	SM00387	Histidine kinase-like ATPases
At1D1609_RS16945	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS16970	SM00028	Tetratricopeptide repeats
At1D1609_RS16980	SM00028	Tetratricopeptide repeats
At1D1609_RS17040	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS17060	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS17095	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS17105	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS17105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS17145	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS17165	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS17205	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS17235	SM00919	Malic enzyme, NAD binding domain
At1D1609_RS17235	SM01274	At1D1609_RS17235
At1D1609_RS17245	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS17260	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS17275	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
At1D1609_RS17275	SM00091	PAS domain
At1D1609_RS17275	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS17325	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS17355	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS17405	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS17420	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS17440	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS17475	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS17475	SM00895	At1D1609_RS17475
At1D1609_RS17490	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS17500	SM00965	Secretin and TonB N terminus short domain
At1D1609_RS17515	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS17550	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS17605	SM01329	At1D1609_RS17605
At1D1609_RS17655	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS17660	SM00344	helix_turn_helix ASNC type
At1D1609_RS17690	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS17695	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS17700	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS17735	SM00903	Flavin reductase like domain
At1D1609_RS17790	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS17795	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS17870	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
At1D1609_RS17885	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS17890	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS17910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS17910	SM00895	At1D1609_RS17910
At1D1609_RS17915	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS17925	SM00822	At1D1609_RS17925
At1D1609_RS17935	SM00849	Metallo-beta-lactamase superfamily
At1D1609_RS17940	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
At1D1609_RS17975	SM00861	Transketolase, pyrimidine binding domain
At1D1609_RS17995	SM00344	helix_turn_helix ASNC type
At1D1609_RS18010	SM00878	Biotin carboxylase C-terminal domain
At1D1609_RS18040	SM01007	Class II Aldolase and Adducin N-terminal domain
At1D1609_RS18045	SM00420	helix_turn_helix, Deoxyribose operon repressor
At1D1609_RS18045	SM01134	At1D1609_RS18045
At1D1609_RS18060	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS18095	SM00052	Putative diguanylate phosphodiesterase
At1D1609_RS18095	SM00267	diguanylate cyclase
At1D1609_RS18120	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS18215	SM00957	SecA DEAD-like domain
At1D1609_RS18215	SM00958	SecA preprotein cross-linking domain
At1D1609_RS18255	SM00507	HNH nucleases
At1D1609_RS18360	SM01043	Bacterial transcriptional activator domain
At1D1609_RS18385	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS18400	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS18435	SM00878	Biotin carboxylase C-terminal domain
At1D1609_RS18460	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS18465	SM00478	endonuclease III
At1D1609_RS18500	SM00893	Electron transfer flavoprotein domain
At1D1609_RS18505	SM00893	Electron transfer flavoprotein domain
At1D1609_RS18540	SM00448	cheY-homologous receiver domain
At1D1609_RS18555	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS18570	SM00563	Phosphate acyltransferases
At1D1609_RS18600	SM00849	Metallo-beta-lactamase superfamily
At1D1609_RS18630	SM00327	von Willebrand factor (vWF) type A domain
At1D1609_RS18640	SM00271	DnaJ molecular chaperone homology domain
At1D1609_RS18700	SM00833	Cobalamin synthesis protein cobW C-terminal domain
At1D1609_RS18780	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS18790	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
At1D1609_RS18800	SM00226	Low molecular weight phosphatase family
At1D1609_RS18830	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
At1D1609_RS18860	SM00450	Rhodanese Homology Domain
At1D1609_RS18935	SM00857	Resolvase, N terminal domain
At1D1609_RS18965	SM00950	At1D1609_RS18965
At1D1609_RS18980	SM00889	Elongation factor G, domain IV
At1D1609_RS19010	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
At1D1609_RS19040	SM00860	SMI1 / KNR4 family
At1D1609_RS19055	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
At1D1609_RS19145	SM00028	Tetratricopeptide repeats
At1D1609_RS19145	SM01359	At1D1609_RS19145
At1D1609_RS19145	SM01360	At1D1609_RS19145
At1D1609_RS19155	SM00464	Found in ATP-dependent protease La (LON)
At1D1609_RS19190	SM00978	At1D1609_RS19190
At1D1609_RS19215	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS19280	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS19290	SM00966	SpoVT / AbrB like domain 
At1D1609_RS19305	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS19305	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS19340	SM00116	Domain in cystathionine beta-synthase and other proteins.
At1D1609_RS19340	SM01091	Transporter associated domain
At1D1609_RS19365	SM00861	Transketolase, pyrimidine binding domain
At1D1609_RS19370	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
At1D1609_RS19405	SM00346	helix_turn_helix isocitrate lyase regulation
At1D1609_RS19420	SM00822	At1D1609_RS19420
At1D1609_RS19440	SM00344	helix_turn_helix ASNC type
At1D1609_RS19465	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS19490	SM00671	Sel1-like repeats.
At1D1609_RS19515	SM01001	AIR carboxylase
At1D1609_RS19530	SM00028	Tetratricopeptide repeats
At1D1609_RS19570	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS19570	SM00448	cheY-homologous receiver domain
At1D1609_RS19585	SM00267	diguanylate cyclase
At1D1609_RS19600	SM00257	Lysin motif
At1D1609_RS19610	SM00244	prohibitin homologues
At1D1609_RS19620	SM00116	Domain in cystathionine beta-synthase and other proteins.
At1D1609_RS19655	SM00448	cheY-homologous receiver domain
At1D1609_RS19655	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS19660	SM00387	Histidine kinase-like ATPases
At1D1609_RS19660	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS19680	SM00448	cheY-homologous receiver domain
At1D1609_RS19680	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS19685	SM00387	Histidine kinase-like ATPases
At1D1609_RS19685	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS19710	SM00870	At1D1609_RS19710
At1D1609_RS19725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS19725	SM00895	At1D1609_RS19725
At1D1609_RS19755	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS19790	SM00903	Flavin reductase like domain
At1D1609_RS19805	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS19805	SM00866	At1D1609_RS19805
At1D1609_RS19820	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS19830	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS19830	SM00895	At1D1609_RS19830
At1D1609_RS19840	SM01230	At1D1609_RS19840
At1D1609_RS19860	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS19865	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS19890	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS19890	SM00895	At1D1609_RS19890
At1D1609_RS19905	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS19910	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS19935	SM00903	Flavin reductase like domain
At1D1609_RS19950	SM01130	At1D1609_RS19950
At1D1609_RS19955	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS19990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS19990	SM00895	At1D1609_RS19990
At1D1609_RS20025	SM00460	Transglutaminase/protease-like homologues
At1D1609_RS20035	SM00460	Transglutaminase/protease-like homologues
At1D1609_RS20040	SM00327	von Willebrand factor (vWF) type A domain
At1D1609_RS20045	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS20055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS20055	SM00895	At1D1609_RS20055
At1D1609_RS20085	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS20120	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS20125	SM00829	Enoylreductase
At1D1609_RS20135	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS20140	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS20215	SM00878	Biotin carboxylase C-terminal domain
At1D1609_RS20225	SM00796	Allophanate hydrolase subunit 1
At1D1609_RS20230	SM00797	Allophanate hydrolase subunit 2
At1D1609_RS20240	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS20285	SM01133	At1D1609_RS20285
At1D1609_RS20310	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS20330	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS20380	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS20415	SM00994	ClpX C4-type zinc finger
At1D1609_RS20590	SM00953	At1D1609_RS20590
At1D1609_RS20645	SM00448	cheY-homologous receiver domain
At1D1609_RS20710	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS20715	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS20725	SM00420	helix_turn_helix, Deoxyribose operon repressor
At1D1609_RS20725	SM01134	At1D1609_RS20725
At1D1609_RS20735	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
At1D1609_RS20755	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS20775	SM00448	cheY-homologous receiver domain
At1D1609_RS20775	SM01012	At1D1609_RS20775
At1D1609_RS20780	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS20780	SM00895	At1D1609_RS20780
At1D1609_RS20800	SM00796	Allophanate hydrolase subunit 1
At1D1609_RS20800	SM00797	Allophanate hydrolase subunit 2
At1D1609_RS20805	SM00878	Biotin carboxylase C-terminal domain
At1D1609_RS20810	SM00642	Alpha-amylase domain
At1D1609_RS20815	SM00422	helix_turn_helix, mercury resistance
At1D1609_RS20850	SM00470	ParB-like nuclease domain
At1D1609_RS20870	SM01119	At1D1609_RS20870
At1D1609_RS20910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS20910	SM00866	At1D1609_RS20910
At1D1609_RS20970	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS20990	SM00965	Secretin and TonB N terminus short domain
At1D1609_RS21005	SM00823	Phosphopantetheine attachment site
At1D1609_RS21010	SM00823	Phosphopantetheine attachment site
At1D1609_RS21010	SM01294	At1D1609_RS21010
At1D1609_RS21015	SM00822	At1D1609_RS21015
At1D1609_RS21015	SM00823	Phosphopantetheine attachment site
At1D1609_RS21015	SM00825	Beta-ketoacyl synthase
At1D1609_RS21015	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
At1D1609_RS21030	SM00923	MbtH-like protein
At1D1609_RS21045	SM00823	Phosphopantetheine attachment site
At1D1609_RS21050	SM00823	Phosphopantetheine attachment site
At1D1609_RS21050	SM01294	At1D1609_RS21050
At1D1609_RS21055	SM00822	At1D1609_RS21055
At1D1609_RS21055	SM00823	Phosphopantetheine attachment site
At1D1609_RS21055	SM00825	Beta-ketoacyl synthase
At1D1609_RS21055	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
At1D1609_RS21065	SM00823	Phosphopantetheine attachment site
At1D1609_RS21110	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS21110	SM00895	At1D1609_RS21110
At1D1609_RS21130	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS21170	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS21190	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS21205	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS21205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS21235	SM00028	Tetratricopeptide repeats
At1D1609_RS21325	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS21325	SM00387	Histidine kinase-like ATPases
At1D1609_RS21325	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS21330	SM00448	cheY-homologous receiver domain
At1D1609_RS21330	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS21335	SM00014	Acid phosphatase homologues
At1D1609_RS21375	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS21385	SM00729	Elongator protein 3, MiaB family, Radical SAM
At1D1609_RS21385	SM00876	Biotin and Thiamin Synthesis associated domain
At1D1609_RS21415	SM00344	helix_turn_helix ASNC type
At1D1609_RS21450	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
At1D1609_RS21460	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS21475	SM00387	Histidine kinase-like ATPases
At1D1609_RS21475	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS21480	SM00448	cheY-homologous receiver domain
At1D1609_RS21480	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS21515	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS21550	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS21565	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
At1D1609_RS21565	SM00387	Histidine kinase-like ATPases
At1D1609_RS21570	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS21570	SM00448	cheY-homologous receiver domain
At1D1609_RS21610	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS21625	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
At1D1609_RS21625	SM00091	PAS domain
At1D1609_RS21625	SM00387	Histidine kinase-like ATPases
At1D1609_RS21625	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS21625	SM00448	cheY-homologous receiver domain
At1D1609_RS21705	SM00028	Tetratricopeptide repeats
At1D1609_RS21755	SM00642	Alpha-amylase domain
At1D1609_RS21775	SM00642	Alpha-amylase domain
At1D1609_RS21800	SM00344	helix_turn_helix ASNC type
At1D1609_RS21815	SM00822	At1D1609_RS21815
At1D1609_RS21820	SM00829	Enoylreductase
At1D1609_RS21835	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS21840	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS21895	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
At1D1609_RS21920	SM00316	Ribosomal protein S1-like RNA-binding domain
At1D1609_RS21940	SM00474	3'-5' exonuclease
At1D1609_RS21980	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS21985	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS21995	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS21995	SM00895	At1D1609_RS21995
At1D1609_RS22000	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
At1D1609_RS22020	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS22025	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS22065	SM00564	beta-propeller repeat
At1D1609_RS22120	SM01154	At1D1609_RS22120
At1D1609_RS22135	SM00984	UDP binding domain
At1D1609_RS22165	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS22175	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS22185	SM00344	helix_turn_helix ASNC type
At1D1609_RS22200	SM00448	cheY-homologous receiver domain
At1D1609_RS22205	SM00911	HWE histidine kinase
At1D1609_RS22210	SM00911	HWE histidine kinase
At1D1609_RS22245	SM00487	DEAD-like helicases superfamily
At1D1609_RS22245	SM00490	helicase superfamily c-terminal domain
At1D1609_RS22260	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
At1D1609_RS22265	SM00937	At1D1609_RS22265
At1D1609_RS22280	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS22280	SM01086	C-terminal, D2-small domain, of ClpB protein
At1D1609_RS22340	SM00671	Sel1-like repeats.
At1D1609_RS22355	SM00857	Resolvase, N terminal domain
At1D1609_RS22375	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
At1D1609_RS22380	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS22495	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS22510	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS22570	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS22575	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS22595	SM01012	At1D1609_RS22595
At1D1609_RS22610	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS22690	SM00448	cheY-homologous receiver domain
At1D1609_RS22695	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
At1D1609_RS22695	SM00091	PAS domain
At1D1609_RS22695	SM00911	HWE histidine kinase
At1D1609_RS22700	SM00448	cheY-homologous receiver domain
At1D1609_RS22705	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
At1D1609_RS22705	SM00091	PAS domain
At1D1609_RS22740	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS22765	SM00822	At1D1609_RS22765
At1D1609_RS22770	SM00829	Enoylreductase
At1D1609_RS22785	SM00642	Alpha-amylase domain
At1D1609_RS22870	SM01120	At1D1609_RS22870
At1D1609_RS22875	SM00344	helix_turn_helix ASNC type
At1D1609_RS22885	SM00387	Histidine kinase-like ATPases
At1D1609_RS22885	SM01049	At1D1609_RS22885
At1D1609_RS22890	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS22890	SM00448	cheY-homologous receiver domain
At1D1609_RS22930	SM01130	At1D1609_RS22930
At1D1609_RS22945	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS22995	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS23055	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS23105	SM00829	Enoylreductase
At1D1609_RS23110	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS23120	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS23155	SM00220	Serine/Threonine protein kinases, catalytic domain
At1D1609_RS23160	SM00331	Sigma factor PP2C-like phosphatases
At1D1609_RS23160	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
At1D1609_RS23180	SM00240	Forkhead associated domain
At1D1609_RS23225	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS23225	SM01086	C-terminal, D2-small domain, of ClpB protein
At1D1609_RS23265	SM00052	Putative diguanylate phosphodiesterase
At1D1609_RS23265	SM00267	diguanylate cyclase
At1D1609_RS23285	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS23295	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS23325	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS23345	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS23360	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS23395	SM00100	Cyclic nucleotide-monophosphate binding domain
At1D1609_RS23395	SM00419	helix_turn_helix, cAMP Regulatory protein
At1D1609_RS23425	SM00327	von Willebrand factor (vWF) type A domain
At1D1609_RS23510	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS23535	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
At1D1609_RS23590	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS23600	SM00346	helix_turn_helix isocitrate lyase regulation
At1D1609_RS23620	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS23640	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS23685	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS23690	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS23750	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS23775	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS23810	SM00478	endonuclease III
At1D1609_RS23820	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS23840	SM00346	helix_turn_helix isocitrate lyase regulation
At1D1609_RS23865	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS23905	SM00465	GIY-YIG type nucleases (URI domain)
At1D1609_RS23930	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS23975	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS23975	SM00930	At1D1609_RS23975
At1D1609_RS23990	SM00052	Putative diguanylate phosphodiesterase
At1D1609_RS23990	SM00267	diguanylate cyclase
At1D1609_RS24000	SM00450	Rhodanese Homology Domain
At1D1609_RS24005	SM00880	At1D1609_RS24005
At1D1609_RS24010	SM01118	At1D1609_RS24010
At1D1609_RS24065	SM00320	WD40 repeats
At1D1609_RS24075	SM00833	Cobalamin synthesis protein cobW C-terminal domain
At1D1609_RS24085	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS24090	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS24135	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS24140	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS24185	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS24215	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS24220	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS24275	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS24280	SM00346	helix_turn_helix isocitrate lyase regulation
At1D1609_RS24285	SM00882	Coenzyme A transferase
At1D1609_RS24290	SM00882	Coenzyme A transferase
At1D1609_RS24305	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS24335	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS24350	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS24355	SM00710	Parallel beta-helix repeats
At1D1609_RS24375	SM00014	Acid phosphatase homologues
At1D1609_RS24385	SM00965	Secretin and TonB N terminus short domain
At1D1609_RS24410	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS24440	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS24445	SM00903	Flavin reductase like domain
At1D1609_RS24475	SM00912	haemagglutination activity domain
At1D1609_RS24500	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
At1D1609_RS24540	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS24625	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS24640	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS24645	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS24660	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS24660	SM00895	At1D1609_RS24660
At1D1609_RS24680	SM00052	Putative diguanylate phosphodiesterase
At1D1609_RS24680	SM00267	diguanylate cyclase
At1D1609_RS24695	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
At1D1609_RS24705	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
At1D1609_RS24735	SM00448	cheY-homologous receiver domain
At1D1609_RS24735	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS24740	SM00387	Histidine kinase-like ATPases
At1D1609_RS24740	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS24760	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS24785	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS24795	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS24800	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS24820	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS24825	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS24885	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS24910	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS24925	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS24945	SM00448	cheY-homologous receiver domain
At1D1609_RS24950	SM00864	Tubulin/FtsZ family, GTPase domain
At1D1609_RS24950	SM00865	Tubulin/FtsZ family, C-terminal domain
At1D1609_RS24955	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS24955	SM00895	At1D1609_RS24955
At1D1609_RS24960	SM01130	At1D1609_RS24960
At1D1609_RS24975	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS24990	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS25010	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS25020	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS25035	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS25045	SM00052	Putative diguanylate phosphodiesterase
At1D1609_RS25045	SM00267	diguanylate cyclase
At1D1609_RS25060	SM00903	Flavin reductase like domain
At1D1609_RS25075	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
At1D1609_RS25080	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
At1D1609_RS25080	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
At1D1609_RS25095	SM01130	At1D1609_RS25095
At1D1609_RS25105	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS25105	SM00895	At1D1609_RS25105
At1D1609_RS25125	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS25130	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
At1D1609_RS25140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS25140	SM00895	At1D1609_RS25140
At1D1609_RS25165	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS25180	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS25225	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS25230	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS25235	SM00972	Spore Coat Protein U domain
At1D1609_RS25250	SM00972	Spore Coat Protein U domain
At1D1609_RS25270	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS25280	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS25315	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS25330	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS25355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS25370	SM00344	helix_turn_helix ASNC type
At1D1609_RS25390	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS25395	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
At1D1609_RS25420	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
At1D1609_RS25485	SM00470	ParB-like nuclease domain
At1D1609_RS25490	SM00470	ParB-like nuclease domain
At1D1609_RS25525	SM00235	Zinc-dependent metalloprotease
At1D1609_RS25580	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS25650	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS25655	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS25665	SM00344	helix_turn_helix ASNC type
At1D1609_RS25680	SM01130	At1D1609_RS25680
At1D1609_RS25695	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS25715	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS25755	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS25760	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS25765	SM00873	B3/4 domain
At1D1609_RS25770	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS25790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS25800	SM01130	At1D1609_RS25800
At1D1609_RS25835	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS25845	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS25920	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS25940	SM00861	Transketolase, pyrimidine binding domain
At1D1609_RS25960	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS26015	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS26140	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
At1D1609_RS26145	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS26210	SM00248	ankyrin repeats
At1D1609_RS26225	SM00953	At1D1609_RS26225
At1D1609_RS26260	SM00966	SpoVT / AbrB like domain 
At1D1609_RS26345	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
At1D1609_RS26365	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS26440	SM00470	ParB-like nuclease domain
At1D1609_RS26555	SM00448	cheY-homologous receiver domain
At1D1609_RS26555	SM00862	Transcriptional regulatory protein, C terminal
At1D1609_RS26670	SM00411	bacterial (prokaryotic) histone like domain
At1D1609_RS26680	SM00357	Cold shock protein domain
At1D1609_RS26845	SM00855	Phosphoglycerate mutase family
At1D1609_RS26875	SM00411	bacterial (prokaryotic) histone like domain
At1D1609_RS26880	SM00773	Proposed nucleic acid binding domain
At1D1609_RS26930	SM00945	ProQ/FINO family
At1D1609_RS26940	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS26945	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS27000	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS27000	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
At1D1609_RS27005	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS27045	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS27070	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS27090	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS27110	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS27115	SM00822	At1D1609_RS27115
At1D1609_RS27135	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS27165	SM00420	helix_turn_helix, Deoxyribose operon repressor
At1D1609_RS27165	SM01134	At1D1609_RS27165
At1D1609_RS27185	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS27230	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS27260	SM00470	ParB-like nuclease domain
At1D1609_RS27285	SM00052	Putative diguanylate phosphodiesterase
At1D1609_RS27285	SM00267	diguanylate cyclase
At1D1609_RS27305	SM00357	Cold shock protein domain
At1D1609_RS27355	SM00422	helix_turn_helix, mercury resistance
At1D1609_RS27380	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS27380	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS27415	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS27435	SM00419	helix_turn_helix, cAMP Regulatory protein
At1D1609_RS27445	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS27445	SM00448	cheY-homologous receiver domain
At1D1609_RS27450	SM00091	PAS domain
At1D1609_RS27450	SM00387	Histidine kinase-like ATPases
At1D1609_RS27450	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS27515	SM00347	helix_turn_helix multiple antibiotic resistance protein
At1D1609_RS27535	SM00822	At1D1609_RS27535
At1D1609_RS27540	SM01130	At1D1609_RS27540
At1D1609_RS27560	SM00893	Electron transfer flavoprotein domain
At1D1609_RS27565	SM00893	Electron transfer flavoprotein domain
At1D1609_RS27570	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS27675	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS27710	SM00893	Electron transfer flavoprotein domain
At1D1609_RS27715	SM00893	Electron transfer flavoprotein domain
At1D1609_RS27735	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS27745	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS27780	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS27800	SM00346	helix_turn_helix isocitrate lyase regulation
At1D1609_RS27845	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS27890	SM01092	CO dehydrogenase flavoprotein C-terminal domain
At1D1609_RS27900	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS27900	SM00895	At1D1609_RS27900
At1D1609_RS27920	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
At1D1609_RS27965	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS27975	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS27990	SM00346	helix_turn_helix isocitrate lyase regulation
At1D1609_RS28000	SM00062	Bacterial periplasmic substrate-binding proteins
At1D1609_RS28015	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS28050	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS28075	SM00487	DEAD-like helicases superfamily
At1D1609_RS28080	SM00470	ParB-like nuclease domain
At1D1609_RS28120	SM00773	Proposed nucleic acid binding domain
At1D1609_RS28175	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS28185	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS28225	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS28265	SM00387	Histidine kinase-like ATPases
At1D1609_RS28265	SM00388	His Kinase A (phosphoacceptor) domain
At1D1609_RS28365	SM00255	Toll - interleukin 1 - resistance
At1D1609_RS28385	SM00387	Histidine kinase-like ATPases
At1D1609_RS28405	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS28405	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS28455	SM00267	diguanylate cyclase
At1D1609_RS28465	SM00470	ParB-like nuclease domain
At1D1609_RS28490	SM00506	Appr-1"-p processing enzyme
At1D1609_RS28495	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
At1D1609_RS28545	SM00857	Resolvase, N terminal domain
At1D1609_RS28565	SM00953	At1D1609_RS28565
At1D1609_RS28635	SM00901	At1D1609_RS28635
At1D1609_RS28675	SM00487	DEAD-like helicases superfamily
At1D1609_RS28690	SM00470	ParB-like nuclease domain
At1D1609_RS28735	SM00345	helix_turn_helix gluconate operon transcriptional repressor
At1D1609_RS28740	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS28790	SM00260	Two component signalling adaptor domain
At1D1609_RS28795	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
At1D1609_RS28795	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS28800	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS28935	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS28970	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS28980	SM00354	helix_turn _helix lactose operon repressor
At1D1609_RS29005	SM00382	ATPases associated with a variety of cellular activities
At1D1609_RS29010	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS29015	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
At1D1609_RS29015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
At1D1609_RS29020	SM00260	Two component signalling adaptor domain
At1D1609_RS29025	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
At1D1609_RS29035	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS29040	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS29045	SM00903	Flavin reductase like domain
At1D1609_RS29095	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS29115	SM00342	helix_turn_helix, arabinose operon control protein
At1D1609_RS29120	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
At1D1609_RS29130	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS29145	SM00487	DEAD-like helicases superfamily
At1D1609_RS29155	SM00470	ParB-like nuclease domain
At1D1609_RS29190	SM00773	Proposed nucleic acid binding domain
At1D1609_RS29240	SM00530	Helix-turn-helix XRE-family like proteins 
At1D1609_RS29250	SM00421	helix_turn_helix, Lux Regulon
At1D1609_RS29290	SM00382	ATPases associated with a variety of cellular activities
