locus-tag class description AVI_RS00020 PF03618 Kinase/pyrophosphorylase AVI_RS00025 PF02545 Maf-like protein AVI_RS00030 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AVI_RS00030 PF01488 Shikimate / quinate 5-dehydrogenase AVI_RS00030 PF08501 Shikimate dehydrogenase substrate binding domain AVI_RS00035 PF01121 Dephospho-CoA kinase AVI_RS00040 PF00929 Exonuclease AVI_RS00045 PF02556 Preprotein translocase subunit SecB AVI_RS00050 PF04186 FxsA cytoplasmic membrane protein AVI_RS00060 PF06725 3D domain AVI_RS00060 PF03562 MltA specific insert domain AVI_RS00075 PF01751 Toprim domain AVI_RS00075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS00075 PF00986 DNA gyrase B subunit, carboxyl terminus AVI_RS00075 PF00204 DNA gyrase B AVI_RS00100 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AVI_RS00105 PF00291 Pyridoxal-phosphate dependent enzyme AVI_RS00110 PF00290 Tryptophan synthase alpha chain AVI_RS00115 PF01039 Carboxyl transferase domain AVI_RS00120 PF02875 Mur ligase family, glutamate ligase domain AVI_RS00120 PF08245 Mur ligase middle domain AVI_RS00135 PF00085 Thioredoxin AVI_RS00145 PF10431 C-terminal, D2-small domain, of ClpB protein AVI_RS00145 PF00004 ATPase family associated with various cellular activities (AAA) AVI_RS00145 PF07724 AAA domain (Cdc48 subfamily) AVI_RS00150 PF00227 Proteasome subunit AVI_RS00155 PF00475 Imidazoleglycerol-phosphate dehydratase AVI_RS00160 PF00117 Glutamine amidotransferase class-I AVI_RS00165 PF00977 Histidine biosynthesis protein AVI_RS00170 PF00977 Histidine biosynthesis protein AVI_RS00175 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AVI_RS00180 PF00485 Phosphoribulokinase / Uridine kinase family AVI_RS00190 PF00472 RF-1 domain AVI_RS00195 PF01293 Phosphoenolpyruvate carboxykinase AVI_RS00200 PF00072 Response regulator receiver domain AVI_RS00200 PF00486 Transcriptional regulatory protein, C terminal AVI_RS00205 PF00672 HAMP domain AVI_RS00205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS00205 PF13755 Sensor N-terminal transmembrane domain AVI_RS00205 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS00205 PF13756 Stimulus-sensing domain AVI_RS00215 PF03610 PTS system fructose IIA component AVI_RS00215 PF03830 PTS system sorbose subfamily IIB component AVI_RS00220 PF00381 PTS HPr component phosphorylation site AVI_RS00225 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AVI_RS00225 PF05221 S-adenosyl-L-homocysteine hydrolase AVI_RS00230 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS00230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS00235 PF01636 Phosphotransferase enzyme family AVI_RS00240 PF12804 MobA-like NTP transferase domain AVI_RS00245 PF12705 PD-(D/E)XK nuclease superfamily AVI_RS00250 PF12705 PD-(D/E)XK nuclease superfamily AVI_RS00250 PF00580 UvrD/REP helicase N-terminal domain AVI_RS00250 PF13361 UvrD-like helicase C-terminal domain AVI_RS00255 PF01274 Malate synthase AVI_RS00270 PF00072 Response regulator receiver domain AVI_RS00275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS00275 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS00280 PF08482 ATP-dependent helicase C-terminal AVI_RS00280 PF04408 Helicase associated domain (HA2) AVI_RS00280 PF00270 DEAD/DEAH box helicase AVI_RS00280 PF00271 Helicase conserved C-terminal domain AVI_RS00285 PF02423 Ornithine cyclodeaminase/mu-crystallin family AVI_RS00325 PF07690 Major Facilitator Superfamily AVI_RS00330 PF00701 Dihydrodipicolinate synthetase family AVI_RS00335 PF00356 Bacterial regulatory proteins, lacI family AVI_RS00345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVI_RS00345 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVI_RS00355 PF00294 pfkB family carbohydrate kinase AVI_RS00360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVI_RS00360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVI_RS00360 PF00205 Thiamine pyrophosphate enzyme, central domain AVI_RS00365 PF01261 Xylose isomerase-like TIM barrel AVI_RS00375 PF04962 KduI/IolB family AVI_RS00405 PF00106 short chain dehydrogenase AVI_RS00425 PF04542 Sigma-70 region 2 AVI_RS00425 PF04545 Sigma-70, region 4 AVI_RS00430 PF12973 ChrR Cupin-like domain AVI_RS00440 PF00455 DeoR C terminal sensor domain AVI_RS00440 PF08220 DeoR-like helix-turn-helix domain AVI_RS00445 PF01266 FAD dependent oxidoreductase AVI_RS00445 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AVI_RS00450 PF00005 ABC transporter AVI_RS00450 PF08402 TOBE domain AVI_RS00455 PF00005 ABC transporter AVI_RS00460 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS00465 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS00480 PF00034 Cytochrome c AVI_RS00485 PF02348 Cytidylyltransferase AVI_RS00490 PF00800 Prephenate dehydratase AVI_RS00490 PF01817 Chorismate mutase type II AVI_RS00495 PF00933 Glycosyl hydrolase family 3 N terminal domain AVI_RS00500 PF09297 NADH pyrophosphatase zinc ribbon domain AVI_RS00500 PF00293 NUDIX domain AVI_RS00500 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AVI_RS00510 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AVI_RS00510 PF12170 DNA polymerase III tau subunit V interacting with alpha AVI_RS00510 PF12169 DNA polymerase III subunits gamma and tau domain III AVI_RS00515 PF02575 YbaB/EbfC DNA-binding family AVI_RS00525 PF07411 Domain of unknown function (DUF1508) AVI_RS00540 PF00091 Tubulin/FtsZ family, GTPase domain AVI_RS00540 PF12327 FtsZ family, C-terminal domain AVI_RS00545 PF03144 Elongation factor Tu domain 2 AVI_RS00545 PF06421 GTP-binding protein LepA C-terminus AVI_RS00545 PF00679 Elongation factor G C-terminus AVI_RS00545 PF00009 Elongation factor Tu GTP binding domain AVI_RS00555 PF00884 Sulfatase AVI_RS00555 PF16347 Domain of unknown function (DUF4976) AVI_RS00565 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVI_RS00565 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVI_RS00565 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVI_RS00565 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVI_RS00570 PF03061 Thioesterase superfamily AVI_RS00585 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AVI_RS00595 PF03960 ArsC family AVI_RS00600 PF04073 Aminoacyl-tRNA editing domain AVI_RS00605 PF02073 Thermophilic metalloprotease (M29) AVI_RS00620 PF00313 'Cold-shock' DNA-binding domain AVI_RS00625 PF02601 Exonuclease VII, large subunit AVI_RS00625 PF13742 OB-fold nucleic acid binding domain AVI_RS00640 PF00535 Glycosyl transferase family 2 AVI_RS00650 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVI_RS00650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVI_RS00655 PF00248 Aldo/keto reductase family AVI_RS00660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS00660 PF03466 LysR substrate binding domain AVI_RS00665 PF00248 Aldo/keto reductase family AVI_RS00680 PF13662 Toprim domain AVI_RS00680 PF02132 RecR protein AVI_RS00685 PF13406 Transglycosylase SLT domain AVI_RS00710 PF05977 Transmembrane secretion effector AVI_RS00715 PF17384 RimP C-terminal SH3 domain AVI_RS00715 PF02576 RimP N-terminal domain AVI_RS00720 PF00575 S1 RNA binding domain AVI_RS00720 PF13184 NusA-like KH domain AVI_RS00720 PF08529 NusA N-terminal domain AVI_RS00730 PF00009 Elongation factor Tu GTP binding domain AVI_RS00730 PF11987 Translation-initiation factor 2 AVI_RS00730 PF08364 Bacterial translation initiation factor IF-2 associated region AVI_RS00730 PF04760 Translation initiation factor IF-2, N-terminal region AVI_RS00735 PF02033 Ribosome-binding factor A AVI_RS00740 PF16198 tRNA pseudouridylate synthase B C-terminal domain AVI_RS00740 PF09157 Pseudouridine synthase II TruB, C-terminal AVI_RS00740 PF01509 TruB family pseudouridylate synthase (N terminal domain) AVI_RS00745 PF00312 Ribosomal protein S15 AVI_RS00755 PF01138 3' exoribonuclease family, domain 1 AVI_RS00755 PF00013 KH domain AVI_RS00755 PF03725 3' exoribonuclease family, domain 2 AVI_RS00755 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AVI_RS00755 PF00575 S1 RNA binding domain AVI_RS00760 PF05175 Methyltransferase small domain AVI_RS00760 PF08468 Methyltransferase small domain N-terminal AVI_RS00770 PF00109 Beta-ketoacyl synthase, N-terminal domain AVI_RS00770 PF02801 Beta-ketoacyl synthase, C-terminal domain AVI_RS00775 PF07977 FabA-like domain AVI_RS00780 PF01475 Ferric uptake regulator family AVI_RS00785 PF03458 UPF0126 domain AVI_RS00795 PF00083 Sugar (and other) transporter AVI_RS00795 PF07690 Major Facilitator Superfamily AVI_RS00810 PF02224 Cytidylate kinase AVI_RS00815 PF00575 S1 RNA binding domain AVI_RS00835 PF00707 Translation initiation factor IF-3, C-terminal domain AVI_RS00835 PF05198 Translation initiation factor IF-3, N-terminal domain AVI_RS00845 PF00486 Transcriptional regulatory protein, C terminal AVI_RS00845 PF00072 Response regulator receiver domain AVI_RS00850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS00855 PF01632 Ribosomal protein L35 AVI_RS00860 PF00453 Ribosomal protein L20 AVI_RS00865 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AVI_RS00865 PF01409 tRNA synthetases class II core domain (F) AVI_RS00875 PF03483 B3/4 domain AVI_RS00875 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AVI_RS00875 PF03147 Ferredoxin-fold anticodon binding domain AVI_RS00875 PF01588 Putative tRNA binding domain AVI_RS00875 PF03484 tRNA synthetase B5 domain AVI_RS00880 PF07886 BA14K-like protein AVI_RS00905 PF00437 Type II/IV secretion system protein AVI_RS00920 PF13629 Pilus formation protein N terminal region AVI_RS00920 PF04972 BON domain AVI_RS00920 PF00263 Bacterial type II and III secretion system protein AVI_RS00960 PF01676 Metalloenzyme superfamily AVI_RS00965 PF00962 Adenosine/AMP deaminase AVI_RS00980 PF01810 LysE type translocator AVI_RS00985 PF00300 Histidine phosphatase superfamily (branch 1) AVI_RS00990 PF05173 Dihydrodipicolinate reductase, C-terminus AVI_RS00990 PF01113 Dihydrodipicolinate reductase, N-terminus AVI_RS00995 PF00005 ABC transporter AVI_RS00995 PF00664 ABC transporter transmembrane region AVI_RS01000 PF02685 Glucokinase AVI_RS01005 PF02142 MGS-like domain AVI_RS01010 PF03411 Penicillin-insensitive murein endopeptidase AVI_RS01015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVI_RS01020 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS01025 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS01025 PF12911 N-terminal TM domain of oligopeptide transport permease C AVI_RS01030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVI_RS01030 PF00005 ABC transporter AVI_RS01035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVI_RS01045 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AVI_RS01045 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AVI_RS01070 PF02608 ABC transporter substrate-binding protein PnrA-like AVI_RS01075 PF00005 ABC transporter AVI_RS01080 PF02653 Branched-chain amino acid transport system / permease component AVI_RS01085 PF02653 Branched-chain amino acid transport system / permease component AVI_RS01090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVI_RS01095 PF01048 Phosphorylase superfamily AVI_RS01100 PF01791 DeoC/LacD family aldolase AVI_RS01105 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AVI_RS01105 PF00591 Glycosyl transferase family, a/b domain AVI_RS01105 PF02885 Glycosyl transferase family, helical bundle domain AVI_RS01110 PF00392 Bacterial regulatory proteins, gntR family AVI_RS01110 PF07702 UTRA domain AVI_RS01115 PF06754 Phosphonate metabolism protein PhnG AVI_RS01120 PF05845 Bacterial phosphonate metabolism protein (PhnH) AVI_RS01125 PF05861 Bacterial phosphonate metabolism protein (PhnI) AVI_RS01130 PF06007 Phosphonate metabolism protein PhnJ AVI_RS01135 PF00005 ABC transporter AVI_RS01140 PF00005 ABC transporter AVI_RS01145 PF00132 Bacterial transferase hexapeptide (six repeats) AVI_RS01150 PF00005 ABC transporter AVI_RS01160 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS01165 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS01170 PF06299 Protein of unknown function (DUF1045) AVI_RS01175 PF07969 Amidohydrolase family AVI_RS01180 PF00625 Guanylate kinase AVI_RS01200 PF00883 Cytosol aminopeptidase family, catalytic domain AVI_RS01200 PF02789 Cytosol aminopeptidase family, N-terminal domain AVI_RS01205 PF04264 YceI-like domain AVI_RS01210 PF04264 YceI-like domain AVI_RS01220 PF00877 NlpC/P60 family AVI_RS01225 PF01612 3'-5' exonuclease AVI_RS01225 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVI_RS01225 PF01367 5'-3' exonuclease, C-terminal SAM fold AVI_RS01225 PF00476 DNA polymerase family A AVI_RS01235 PF07687 Peptidase dimerisation domain AVI_RS01235 PF01546 Peptidase family M20/M25/M40 AVI_RS01240 PF04073 Aminoacyl-tRNA editing domain AVI_RS01250 PF00905 Penicillin binding protein transpeptidase domain AVI_RS01250 PF00912 Transglycosylase AVI_RS01250 PF17092 Penicillin-binding protein OB-like domain AVI_RS01255 PF00012 Hsp70 protein AVI_RS01265 PF00226 DnaJ domain AVI_RS01265 PF01556 DnaJ C terminal domain AVI_RS01265 PF00684 DnaJ central domain AVI_RS01270 PF04102 SlyX AVI_RS01275 PF02463 RecF/RecN/SMC N terminal domain AVI_RS01280 PF00899 ThiF family AVI_RS01280 PF00581 Rhodanese-like domain AVI_RS01290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVI_RS01290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVI_RS01300 PF00294 pfkB family carbohydrate kinase AVI_RS01305 PF00563 EAL domain AVI_RS01305 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS01305 PF08448 PAS fold AVI_RS01305 PF08447 PAS fold AVI_RS01310 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AVI_RS01315 PF00361 Proton-conducting membrane transporter AVI_RS01315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVI_RS01320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS01320 PF03466 LysR substrate binding domain AVI_RS01335 PF00440 Bacterial regulatory proteins, tetR family AVI_RS01340 PF00958 GMP synthase C terminal domain AVI_RS01340 PF00117 Glutamine amidotransferase class-I AVI_RS01340 PF02540 NAD synthase AVI_RS01355 PF03073 TspO/MBR family AVI_RS01380 PF01189 16S rRNA methyltransferase RsmB/F AVI_RS01380 PF01029 NusB family AVI_RS01385 PF03330 Lytic transglycolase AVI_RS01395 PF08331 Domain of unknown function (DUF1730) AVI_RS01400 PF00043 Glutathione S-transferase, C-terminal domain AVI_RS01400 PF13417 Glutathione S-transferase, N-terminal domain AVI_RS01405 PF02673 Bacitracin resistance protein BacA AVI_RS01430 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AVI_RS01440 PF13649 Methyltransferase domain AVI_RS01445 PF02767 DNA polymerase III beta subunit, central domain AVI_RS01445 PF00712 DNA polymerase III beta subunit, N-terminal domain AVI_RS01445 PF02768 DNA polymerase III beta subunit, C-terminal domain AVI_RS01450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVI_RS01455 PF02021 Uncharacterised protein family UPF0102 AVI_RS01460 PF13416 Bacterial extracellular solute-binding protein AVI_RS01465 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS01470 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS01475 PF00005 ABC transporter AVI_RS01485 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AVI_RS01485 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AVI_RS01490 PF01078 Magnesium chelatase, subunit ChlI AVI_RS01490 PF13335 Magnesium chelatase, subunit ChlI C-terminal AVI_RS01495 PF00291 Pyridoxal-phosphate dependent enzyme AVI_RS01505 PF01810 LysE type translocator AVI_RS01515 PF00692 dUTPase AVI_RS01520 PF00009 Elongation factor Tu GTP binding domain AVI_RS01520 PF03144 Elongation factor Tu domain 2 AVI_RS01520 PF16658 Class II release factor RF3, C-terminal domain AVI_RS01525 PF00982 Glycosyltransferase family 20 AVI_RS01530 PF02358 Trehalose-phosphatase AVI_RS01535 PF08543 Phosphomethylpyrimidine kinase AVI_RS01550 PF02678 Pirin AVI_RS01550 PF05726 Pirin C-terminal cupin domain AVI_RS01560 PF03466 LysR substrate binding domain AVI_RS01560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS01575 PF02441 Flavoprotein AVI_RS01575 PF04127 DNA / pantothenate metabolism flavoprotein AVI_RS01580 PF13581 Histidine kinase-like ATPase domain AVI_RS01580 PF13426 PAS domain AVI_RS01580 PF07568 Histidine kinase AVI_RS01585 PF00072 Response regulator receiver domain AVI_RS01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS01590 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS01590 PF01627 Hpt domain AVI_RS01590 PF00072 Response regulator receiver domain AVI_RS01590 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI_RS01595 PF03109 ABC1 family AVI_RS01600 PF01209 ubiE/COQ5 methyltransferase family AVI_RS01605 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AVI_RS01605 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AVI_RS01610 PF01649 Ribosomal protein S20 AVI_RS01615 PF08299 Bacterial dnaA protein helix-turn-helix AVI_RS01615 PF00308 Bacterial dnaA protein AVI_RS01615 PF11638 DnaA N-terminal domain AVI_RS01620 PF00892 EamA-like transporter family AVI_RS01625 PF13649 Methyltransferase domain AVI_RS01630 PF06969 HemN C-terminal domain AVI_RS01630 PF04055 Radical SAM superfamily AVI_RS01635 PF01725 Ham1 family AVI_RS01645 PF01138 3' exoribonuclease family, domain 1 AVI_RS01645 PF03725 3' exoribonuclease family, domain 2 AVI_RS01650 PF01628 HrcA protein C terminal domain AVI_RS01655 PF01025 GrpE AVI_RS01660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AVI_RS01665 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AVI_RS01665 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AVI_RS01670 PF04963 Sigma-54 factor, core binding domain AVI_RS01670 PF00309 Sigma-54 factor, Activator interacting domain (AID) AVI_RS01670 PF04552 Sigma-54, DNA binding domain AVI_RS01675 PF00005 ABC transporter AVI_RS01680 PF03968 OstA-like protein AVI_RS01690 PF00216 Bacterial DNA-binding protein AVI_RS01700 PF10672 S-adenosylmethionine-dependent methyltransferase AVI_RS01700 PF01170 Putative RNA methylase family UPF0020 AVI_RS01700 PF02926 THUMP domain AVI_RS01705 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVI_RS01705 PF00588 SpoU rRNA Methylase family AVI_RS01710 PF01252 Signal peptidase (SPase) II AVI_RS01715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS01715 PF00672 HAMP domain AVI_RS01715 PF01627 Hpt domain AVI_RS01715 PF00072 Response regulator receiver domain AVI_RS01715 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS01715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVI_RS01725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS01725 PF03466 LysR substrate binding domain AVI_RS01730 PF05190 MutS family domain IV AVI_RS01730 PF05188 MutS domain II AVI_RS01730 PF01624 MutS domain I AVI_RS01730 PF05192 MutS domain III AVI_RS01730 PF00488 MutS domain V AVI_RS01735 PF01966 HD domain AVI_RS01735 PF08335 GlnD PII-uridylyltransferase AVI_RS01735 PF01842 ACT domain AVI_RS01740 PF03023 Lipid II flippase MurJ AVI_RS01745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVI_RS01750 PF00579 tRNA synthetases class I (W and Y) AVI_RS01760 PF01106 NifU-like domain AVI_RS01765 PF00814 Glycoprotease family AVI_RS01775 PF01475 Ferric uptake regulator family AVI_RS01785 PF00919 Uncharacterized protein family UPF0004 AVI_RS01785 PF01938 TRAM domain AVI_RS01785 PF04055 Radical SAM superfamily AVI_RS01790 PF02562 PhoH-like protein AVI_RS01795 PF02130 Uncharacterized protein family UPF0054 AVI_RS01800 PF03471 Transporter associated domain AVI_RS01800 PF00571 CBS domain AVI_RS01810 PF00795 Carbon-nitrogen hydrolase AVI_RS01815 PF01381 Helix-turn-helix AVI_RS01820 PF02772 S-adenosylmethionine synthetase, central domain AVI_RS01820 PF00438 S-adenosylmethionine synthetase, N-terminal domain AVI_RS01820 PF02773 S-adenosylmethionine synthetase, C-terminal domain AVI_RS01825 PF02390 Putative methyltransferase AVI_RS01835 PF00011 Hsp20/alpha crystallin family AVI_RS01840 PF01156 Inosine-uridine preferring nucleoside hydrolase AVI_RS01855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS01855 PF00672 HAMP domain AVI_RS01865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS01870 PF00825 Ribonuclease P AVI_RS01875 PF02096 60Kd inner membrane protein AVI_RS01875 PF14849 YidC periplasmic domain AVI_RS01880 PF01926 50S ribosome-binding GTPase AVI_RS01885 PF02469 Fasciclin domain AVI_RS01900 PF00696 Amino acid kinase family AVI_RS01905 PF00294 pfkB family carbohydrate kinase AVI_RS01915 PF07559 Flagellar basal body protein FlaE AVI_RS01915 PF00460 Flagella basal body rod protein AVI_RS01915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVI_RS01925 PF00132 Bacterial transferase hexapeptide (six repeats) AVI_RS01925 PF14602 Hexapeptide repeat of succinyl-transferase AVI_RS01925 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AVI_RS01930 PF07687 Peptidase dimerisation domain AVI_RS01930 PF01546 Peptidase family M20/M25/M40 AVI_RS01945 PF13660 Domain of unknown function (DUF4147) AVI_RS01945 PF05161 MOFRL family AVI_RS01950 PF01430 Hsp33 protein AVI_RS01955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVI_RS01955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVI_RS01960 PF00202 Aminotransferase class-III AVI_RS01970 PF00486 Transcriptional regulatory protein, C terminal AVI_RS01970 PF00072 Response regulator receiver domain AVI_RS01975 PF01895 PhoU domain AVI_RS01980 PF00005 ABC transporter AVI_RS01985 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS01990 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS02000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS02000 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS02000 PF00989 PAS fold AVI_RS02000 PF16736 Single Cache-like AVI_RS02005 PF03976 Polyphosphate kinase 2 (PPK2) AVI_RS02025 PF00571 CBS domain AVI_RS02025 PF00005 ABC transporter AVI_RS02030 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS02045 PF07702 UTRA domain AVI_RS02045 PF00392 Bacterial regulatory proteins, gntR family AVI_RS02050 PF00221 Aromatic amino acid lyase AVI_RS02060 PF00202 Aminotransferase class-III AVI_RS02065 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVI_RS02065 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVI_RS02075 PF03480 Bacterial extracellular solute-binding protein, family 7 AVI_RS02080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS02095 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AVI_RS02095 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AVI_RS02105 PF05544 Proline racemase AVI_RS02110 PF00027 Cyclic nucleotide-binding domain AVI_RS02110 PF13545 Crp-like helix-turn-helix domain AVI_RS02115 PF00486 Transcriptional regulatory protein, C terminal AVI_RS02115 PF00072 Response regulator receiver domain AVI_RS02125 PF17149 Periplasmic sensor domain found in signal transduction proteins AVI_RS02125 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS02125 PF00072 Response regulator receiver domain AVI_RS02125 PF00672 HAMP domain AVI_RS02125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS02125 PF01627 Hpt domain AVI_RS02130 PF00072 Response regulator receiver domain AVI_RS02135 PF01979 Amidohydrolase family AVI_RS02140 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS02145 PF00156 Phosphoribosyl transferase domain AVI_RS02150 PF00294 pfkB family carbohydrate kinase AVI_RS02160 PF00342 Phosphoglucose isomerase AVI_RS02165 PF00501 AMP-binding enzyme AVI_RS02165 PF13193 AMP-binding enzyme C-terminal domain AVI_RS02175 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVI_RS02175 PF00128 Alpha amylase, catalytic domain AVI_RS02190 PF01416 tRNA pseudouridine synthase AVI_RS02195 PF02911 Formyl transferase, C-terminal domain AVI_RS02195 PF00551 Formyl transferase AVI_RS02200 PF01327 Polypeptide deformylase AVI_RS02205 PF04379 ApaG domain AVI_RS02210 PF01053 Cys/Met metabolism PLP-dependent enzyme AVI_RS02215 PF00692 dUTPase AVI_RS02230 PF01022 Bacterial regulatory protein, arsR family AVI_RS02235 PF01609 Transposase DDE domain AVI_RS02240 PF13340 Putative transposase of IS4/5 family (DUF4096) AVI_RS02265 PF03466 LysR substrate binding domain AVI_RS02265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS02275 PF02798 Glutathione S-transferase, N-terminal domain AVI_RS02275 PF00043 Glutathione S-transferase, C-terminal domain AVI_RS02285 PF13610 DDE domain AVI_RS02310 PF00664 ABC transporter transmembrane region AVI_RS02310 PF03412 Peptidase C39 family AVI_RS02310 PF00005 ABC transporter AVI_RS02345 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI_RS02360 PF00072 Response regulator receiver domain AVI_RS02360 PF00196 Bacterial regulatory proteins, luxR family AVI_RS02370 PF01180 Dihydroorotate dehydrogenase AVI_RS02410 PF00378 Enoyl-CoA hydratase/isomerase AVI_RS02410 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVI_RS02410 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVI_RS02415 PF02803 Thiolase, C-terminal domain AVI_RS02415 PF00108 Thiolase, N-terminal domain AVI_RS02420 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVI_RS02420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVI_RS02420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVI_RS02420 PF02770 Acyl-CoA dehydrogenase, middle domain AVI_RS02430 PF01925 Sulfite exporter TauE/SafE AVI_RS02440 PF00245 Alkaline phosphatase AVI_RS02450 PF00005 ABC transporter AVI_RS02465 PF00563 EAL domain AVI_RS02465 PF00360 Phytochrome region AVI_RS02465 PF01590 GAF domain AVI_RS02465 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS02470 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AVI_RS02470 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AVI_RS02475 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI_RS02480 PF00270 DEAD/DEAH box helicase AVI_RS02480 PF00271 Helicase conserved C-terminal domain AVI_RS02480 PF08494 DEAD/H associated AVI_RS02490 PF00069 Protein kinase domain AVI_RS02490 PF03793 PASTA domain AVI_RS02500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVI_RS02505 PF01627 Hpt domain AVI_RS02505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS02505 PF00072 Response regulator receiver domain AVI_RS02505 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS02505 PF00672 HAMP domain AVI_RS02510 PF01741 Large-conductance mechanosensitive channel, MscL AVI_RS02515 PF00155 Aminotransferase class I and II AVI_RS02520 PF00483 Nucleotidyl transferase AVI_RS02525 PF16363 GDP-mannose 4,6 dehydratase AVI_RS02530 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AVI_RS02535 PF08484 C-methyltransferase C-terminal domain AVI_RS02535 PF08421 Putative zinc binding domain AVI_RS02540 PF00535 Glycosyl transferase family 2 AVI_RS02565 PF03884 DNA gyrase inhibitor YacG AVI_RS02570 PF02545 Maf-like protein AVI_RS02575 PF01176 Translation initiation factor 1A / IF-1 AVI_RS02585 PF06793 Uncharacterised protein family (UPF0262) AVI_RS02590 PF00815 Histidinol dehydrogenase AVI_RS02600 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVI_RS02640 PF08361 MAATS-type transcriptional repressor, C-terminal region AVI_RS02640 PF00440 Bacterial regulatory proteins, tetR family AVI_RS02650 PF06983 3-demethylubiquinone-9 3-methyltransferase AVI_RS02655 PF02899 Phage integrase, N-terminal SAM-like domain AVI_RS02655 PF00589 Phage integrase family AVI_RS02660 PF00440 Bacterial regulatory proteins, tetR family AVI_RS02660 PF08360 QacR-like protein, C-terminal region AVI_RS02670 PF03352 Methyladenine glycosylase AVI_RS02680 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AVI_RS02680 PF00753 Metallo-beta-lactamase superfamily AVI_RS02680 PF10996 Beta-Casp domain AVI_RS02695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS02695 PF03466 LysR substrate binding domain AVI_RS02740 PF02534 Type IV secretory system Conjugative DNA transfer AVI_RS02750 PF01443 Viral (Superfamily 1) RNA helicase AVI_RS02750 PF03389 MobA/MobL family AVI_RS02750 PF17841 BID domain of Bartonella effector protein (Bep) AVI_RS02755 PF00665 Integrase core domain AVI_RS02760 PF01695 IstB-like ATP binding protein AVI_RS02775 PF05717 IS66 Orf2 like protein AVI_RS02780 PF13817 IS66 C-terminal element AVI_RS02780 PF13005 zinc-finger binding domain of transposase IS66 AVI_RS02780 PF13007 Transposase C of IS166 homeodomain AVI_RS02780 PF03050 Transposase IS66 family AVI_RS02795 PF05717 IS66 Orf2 like protein AVI_RS02800 PF13817 IS66 C-terminal element AVI_RS02800 PF13005 zinc-finger binding domain of transposase IS66 AVI_RS02800 PF03050 Transposase IS66 family AVI_RS02800 PF13007 Transposase C of IS166 homeodomain AVI_RS02810 PF00082 Subtilase family AVI_RS02825 PF01850 PIN domain AVI_RS02830 PF09957 Bacterial antitoxin of type II TA system, VapB AVI_RS02845 PF07015 VirC1 protein AVI_RS02855 PF13340 Putative transposase of IS4/5 family (DUF4096) AVI_RS02875 PF13495 Phage integrase, N-terminal SAM-like domain AVI_RS02875 PF00589 Phage integrase family AVI_RS02890 PF00005 ABC transporter AVI_RS02900 PF00535 Glycosyl transferase family 2 AVI_RS02910 PF00005 ABC transporter AVI_RS02910 PF12848 ABC transporter AVI_RS02920 PF00593 TonB dependent receptor AVI_RS02920 PF07715 TonB-dependent Receptor Plug Domain AVI_RS02935 PF01312 FlhB HrpN YscU SpaS Family AVI_RS02940 PF14841 FliG middle domain AVI_RS02940 PF14842 FliG N-terminal domain AVI_RS02940 PF01706 FliG C-terminal domain AVI_RS02945 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVI_RS02950 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVI_RS02955 PF01618 MotA/TolQ/ExbB proton channel family AVI_RS02960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVI_RS02960 PF00460 Flagella basal body rod protein AVI_RS02965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVI_RS02965 PF18269 T3SS EscN ATPase C-terminal domain AVI_RS02975 PF00460 Flagella basal body rod protein AVI_RS02980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVI_RS02985 PF02049 Flagellar hook-basal body complex protein FliE AVI_RS02990 PF00460 Flagella basal body rod protein AVI_RS02990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVI_RS02995 PF13144 Chaperone for flagella basal body P-ring formation AVI_RS03000 PF02119 Flagellar P-ring protein AVI_RS03010 PF02107 Flagellar L-ring protein AVI_RS03020 PF00813 FliP family AVI_RS03025 PF00700 Bacterial flagellin C-terminal helical region AVI_RS03025 PF00669 Bacterial flagellin N-terminal helical region AVI_RS03030 PF00669 Bacterial flagellin N-terminal helical region AVI_RS03030 PF00700 Bacterial flagellin C-terminal helical region AVI_RS03035 PF00700 Bacterial flagellin C-terminal helical region AVI_RS03035 PF00669 Bacterial flagellin N-terminal helical region AVI_RS03040 PF00669 Bacterial flagellin N-terminal helical region AVI_RS03040 PF00700 Bacterial flagellin C-terminal helical region AVI_RS03045 PF00700 Bacterial flagellin C-terminal helical region AVI_RS03045 PF00669 Bacterial flagellin N-terminal helical region AVI_RS03055 PF00691 OmpA family AVI_RS03055 PF13677 Membrane MotB of proton-channel complex MotA/MotB AVI_RS03080 PF00486 Transcriptional regulatory protein, C terminal AVI_RS03085 PF07559 Flagellar basal body protein FlaE AVI_RS03085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVI_RS03085 PF00460 Flagella basal body rod protein AVI_RS03090 PF00460 Flagella basal body rod protein AVI_RS03090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVI_RS03105 PF07378 Flagellar protein FlbT AVI_RS03110 PF03963 Flagellar hook capping protein - N-terminal region AVI_RS03115 PF01313 Bacterial export proteins, family 3 AVI_RS03120 PF00771 FHIPEP family AVI_RS03155 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AVI_RS03155 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AVI_RS03160 PF00356 Bacterial regulatory proteins, lacI family AVI_RS03165 PF01547 Bacterial extracellular solute-binding protein AVI_RS03170 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS03175 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS03180 PF00128 Alpha amylase, catalytic domain AVI_RS03185 PF00005 ABC transporter AVI_RS03185 PF17912 MalK OB fold domain AVI_RS03185 PF03459 TOBE domain AVI_RS03200 PF03390 2-hydroxycarboxylate transporter family AVI_RS03205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS03205 PF00672 HAMP domain AVI_RS03205 PF02203 Tar ligand binding domain homologue AVI_RS03210 PF00920 Dehydratase family AVI_RS03215 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AVI_RS03220 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AVI_RS03220 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AVI_RS03225 PF01266 FAD dependent oxidoreductase AVI_RS03230 PF00120 Glutamine synthetase, catalytic domain AVI_RS03245 PF00672 HAMP domain AVI_RS03245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS03255 PF00664 ABC transporter transmembrane region AVI_RS03255 PF00005 ABC transporter AVI_RS03260 PF07690 Major Facilitator Superfamily AVI_RS03270 PF00463 Isocitrate lyase family AVI_RS03275 PF06114 IrrE N-terminal-like domain AVI_RS03275 PF09856 Predicted transcriptional regulator (DUF2083) AVI_RS03275 PF01381 Helix-turn-helix AVI_RS03280 PF13416 Bacterial extracellular solute-binding protein AVI_RS03285 PF00005 ABC transporter AVI_RS03285 PF08402 TOBE domain AVI_RS03290 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS03295 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS03305 PF13426 PAS domain AVI_RS03305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS03305 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS03305 PF00989 PAS fold AVI_RS03305 PF13188 PAS domain AVI_RS03350 PF00171 Aldehyde dehydrogenase family AVI_RS03355 PF02082 Transcriptional regulator AVI_RS03360 PF01202 Shikimate kinase AVI_RS03365 PF02611 CDP-diacylglycerol pyrophosphatase AVI_RS03370 PF01266 FAD dependent oxidoreductase AVI_RS03375 PF07470 Glycosyl Hydrolase Family 88 AVI_RS03385 PF00672 HAMP domain AVI_RS03385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS03385 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS03390 PF00072 Response regulator receiver domain AVI_RS03390 PF00486 Transcriptional regulatory protein, C terminal AVI_RS03395 PF06039 Malate:quinone oxidoreductase (Mqo) AVI_RS03400 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI_RS03560 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain AVI_RS03560 PF00589 Phage integrase family AVI_RS03570 PF02541 Ppx/GppA phosphatase family AVI_RS03575 PF01728 FtsJ-like methyltransferase AVI_RS03585 PF03707 Bacterial signalling protein N terminal repeat AVI_RS03585 PF00563 EAL domain AVI_RS03585 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS03585 PF13188 PAS domain AVI_RS03590 PF18415 Histidine kinase receptor ArcB trans-membrane domain AVI_RS03590 PF01627 Hpt domain AVI_RS03590 PF00989 PAS fold AVI_RS03590 PF00072 Response regulator receiver domain AVI_RS03590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS03590 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS03595 PF08676 MutL C terminal dimerisation domain AVI_RS03595 PF01119 DNA mismatch repair protein, C-terminal domain AVI_RS03605 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AVI_RS03615 PF00534 Glycosyl transferases group 1 AVI_RS03615 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AVI_RS03625 PF00459 Inositol monophosphatase family AVI_RS03630 PF01523 Putative modulator of DNA gyrase AVI_RS03635 PF02254 TrkA-N domain AVI_RS03635 PF00999 Sodium/hydrogen exchanger family AVI_RS03640 PF01734 Patatin-like phospholipase AVI_RS03650 PF00849 RNA pseudouridylate synthase AVI_RS03650 PF01479 S4 domain AVI_RS03655 PF14437 MafB19-like deaminase AVI_RS03660 PF00753 Metallo-beta-lactamase superfamily AVI_RS03665 PF07690 Major Facilitator Superfamily AVI_RS03675 PF08450 SMP-30/Gluconolactonase/LRE-like region AVI_RS03680 PF00196 Bacterial regulatory proteins, luxR family AVI_RS03680 PF03472 Autoinducer binding domain AVI_RS03685 PF00005 ABC transporter AVI_RS03690 PF10609 NUBPL iron-transfer P-loop NTPase AVI_RS03700 PF01544 CorA-like Mg2+ transporter protein AVI_RS03705 PF02705 K+ potassium transporter AVI_RS03710 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter AVI_RS03715 PF00119 ATP synthase A chain AVI_RS03720 PF00137 ATP synthase subunit C AVI_RS03725 PF00430 ATP synthase B/B' CF(0) AVI_RS03730 PF00430 ATP synthase B/B' CF(0) AVI_RS03735 PF01351 Ribonuclease HII AVI_RS03740 PF04055 Radical SAM superfamily AVI_RS03750 PF00994 Probable molybdopterin binding domain AVI_RS03755 PF08544 GHMP kinases C terminal AVI_RS03755 PF00288 GHMP kinases N terminal domain AVI_RS03765 PF00348 Polyprenyl synthetase AVI_RS03780 PF06965 Na+/H+ antiporter 1 AVI_RS03780 PF01343 Peptidase family S49 AVI_RS03790 PF08447 PAS fold AVI_RS03790 PF13426 PAS domain AVI_RS03790 PF07536 HWE histidine kinase AVI_RS03795 PF02091 Glycyl-tRNA synthetase alpha subunit AVI_RS03805 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVI_RS03810 PF05746 DALR anticodon binding domain AVI_RS03810 PF02092 Glycyl-tRNA synthetase beta subunit AVI_RS03815 PF04463 Protein of unknown function (DUF523) AVI_RS03820 PF17200 Single Cache domain 2 AVI_RS03820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS03820 PF00672 HAMP domain AVI_RS03820 PF17200 Single Cache domain 2 AVI_RS03820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS03820 PF00672 HAMP domain AVI_RS03830 PF02844 Phosphoribosylglycinamide synthetase, N domain AVI_RS03830 PF02843 Phosphoribosylglycinamide synthetase, C domain AVI_RS03830 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AVI_RS03840 PF00575 S1 RNA binding domain AVI_RS03840 PF09371 Tex-like protein N-terminal domain AVI_RS03840 PF17674 HHH domain AVI_RS03840 PF16921 Tex protein YqgF-like domain AVI_RS03850 PF01040 UbiA prenyltransferase family AVI_RS03855 PF02583 Metal-sensitive transcriptional repressor AVI_RS03880 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS03885 PF00005 ABC transporter AVI_RS03885 PF03459 TOBE domain AVI_RS03890 PF03459 TOBE domain AVI_RS03890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS03895 PF01565 FAD binding domain AVI_RS03895 PF02913 FAD linked oxidases, C-terminal domain AVI_RS03900 PF01300 Telomere recombination AVI_RS03900 PF03481 Putative GTP-binding controlling metal-binding AVI_RS03910 PF00672 HAMP domain AVI_RS03910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS03910 PF02203 Tar ligand binding domain homologue AVI_RS03915 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AVI_RS03915 PF00355 Rieske [2Fe-2S] domain AVI_RS03920 PF00111 2Fe-2S iron-sulfur cluster binding domain AVI_RS03920 PF00175 Oxidoreductase NAD-binding domain AVI_RS03920 PF00970 Oxidoreductase FAD-binding domain AVI_RS03930 PF07886 BA14K-like protein AVI_RS03940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVI_RS03940 PF02770 Acyl-CoA dehydrogenase, middle domain AVI_RS03940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVI_RS03940 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVI_RS03945 PF00378 Enoyl-CoA hydratase/isomerase AVI_RS03950 PF02743 Cache domain AVI_RS03950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS03950 PF00672 HAMP domain AVI_RS03960 PF05958 tRNA (Uracil-5-)-methyltransferase AVI_RS03965 PF01479 S4 domain AVI_RS03965 PF01728 FtsJ-like methyltransferase AVI_RS03975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS03975 PF00672 HAMP domain AVI_RS03980 PF00672 HAMP domain AVI_RS03980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS03980 PF02203 Tar ligand binding domain homologue AVI_RS03985 PF02780 Transketolase, C-terminal domain AVI_RS03985 PF02779 Transketolase, pyrimidine binding domain AVI_RS03985 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AVI_RS03990 PF02609 Exonuclease VII small subunit AVI_RS03995 PF00850 Histone deacetylase domain AVI_RS04010 PF02632 BioY family AVI_RS04015 PF02361 Cobalt transport protein AVI_RS04020 PF00005 ABC transporter AVI_RS04025 PF00491 Arginase family AVI_RS04030 PF06224 Winged helix DNA-binding domain AVI_RS04050 PF00925 GTP cyclohydrolase II AVI_RS04050 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVI_RS04055 PF01264 Chorismate synthase AVI_RS04060 PF03707 Bacterial signalling protein N terminal repeat AVI_RS04060 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS04060 PF00563 EAL domain AVI_RS04060 PF13188 PAS domain AVI_RS04070 PF00300 Histidine phosphatase superfamily (branch 1) AVI_RS04080 PF00226 DnaJ domain AVI_RS04080 PF01556 DnaJ C terminal domain AVI_RS04080 PF00684 DnaJ central domain AVI_RS04090 PF01243 Pyridoxamine 5'-phosphate oxidase AVI_RS04090 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AVI_RS04100 PF07690 Major Facilitator Superfamily AVI_RS04105 PF09278 MerR, DNA binding AVI_RS04105 PF00376 MerR family regulatory protein AVI_RS04110 PF00768 D-alanyl-D-alanine carboxypeptidase AVI_RS04110 PF07943 Penicillin-binding protein 5, C-terminal domain AVI_RS04125 PF13419 Haloacid dehalogenase-like hydrolase AVI_RS04135 PF01523 Putative modulator of DNA gyrase AVI_RS04145 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVI_RS04145 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AVI_RS04150 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVI_RS04155 PF01040 UbiA prenyltransferase family AVI_RS04165 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AVI_RS04170 PF00510 Cytochrome c oxidase subunit III AVI_RS04180 PF02104 SURF1 family AVI_RS04190 PF02401 LytB protein AVI_RS04195 PF00905 Penicillin binding protein transpeptidase domain AVI_RS04205 PF01810 LysE type translocator AVI_RS04210 PF00155 Aminotransferase class I and II AVI_RS04220 PF01636 Phosphotransferase enzyme family AVI_RS04225 PF00075 RNase H AVI_RS04235 PF01297 Zinc-uptake complex component A periplasmic AVI_RS04240 PF00950 ABC 3 transport family AVI_RS04245 PF00005 ABC transporter AVI_RS04250 PF08534 Redoxin AVI_RS04250 PF00462 Glutaredoxin AVI_RS04260 PF02622 Uncharacterized ACR, COG1678 AVI_RS04275 PF08447 PAS fold AVI_RS04275 PF08448 PAS fold AVI_RS04275 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS04275 PF00563 EAL domain AVI_RS04280 PF13302 Acetyltransferase (GNAT) domain AVI_RS04285 PF00675 Insulinase (Peptidase family M16) AVI_RS04285 PF05193 Peptidase M16 inactive domain AVI_RS04290 PF14821 Threonine synthase N terminus AVI_RS04290 PF00291 Pyridoxal-phosphate dependent enzyme AVI_RS04300 PF00781 Diacylglycerol kinase catalytic domain AVI_RS04305 PF13419 Haloacid dehalogenase-like hydrolase AVI_RS04310 PF07729 FCD domain AVI_RS04310 PF00392 Bacterial regulatory proteins, gntR family AVI_RS04320 PF18755 Restriction Enzyme Adenine Methylase Associated AVI_RS04320 PF01555 DNA methylase AVI_RS04350 PF14815 NUDIX domain AVI_RS04350 PF00730 HhH-GPD superfamily base excision DNA repair protein AVI_RS04365 PF02463 RecF/RecN/SMC N terminal domain AVI_RS04380 PF07690 Major Facilitator Superfamily AVI_RS04395 PF00391 PEP-utilising enzyme, mobile domain AVI_RS04395 PF02896 PEP-utilising enzyme, TIM barrel domain AVI_RS04395 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AVI_RS04410 PF03466 LysR substrate binding domain AVI_RS04410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS04420 PF01810 LysE type translocator AVI_RS04430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVI_RS04430 PF00529 HlyD membrane-fusion protein of T1SS AVI_RS04435 PF00005 ABC transporter AVI_RS04435 PF00664 ABC transporter transmembrane region AVI_RS04450 PF00672 HAMP domain AVI_RS04450 PF02203 Tar ligand binding domain homologue AVI_RS04450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS04455 PF01507 Phosphoadenosine phosphosulfate reductase family AVI_RS04460 PF01507 Phosphoadenosine phosphosulfate reductase family AVI_RS04465 PF00009 Elongation factor Tu GTP binding domain AVI_RS04475 PF00356 Bacterial regulatory proteins, lacI family AVI_RS04475 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AVI_RS04485 PF00753 Metallo-beta-lactamase superfamily AVI_RS04485 PF16123 Hydroxyacylglutathione hydrolase C-terminus AVI_RS04495 PF01965 DJ-1/PfpI family AVI_RS04515 PF00654 Voltage gated chloride channel AVI_RS04520 PF00700 Bacterial flagellin C-terminal helical region AVI_RS04520 PF00669 Bacterial flagellin N-terminal helical region AVI_RS04525 PF00654 Voltage gated chloride channel AVI_RS04545 PF05199 GMC oxidoreductase AVI_RS04545 PF00732 GMC oxidoreductase AVI_RS04555 PF00171 Aldehyde dehydrogenase family AVI_RS04560 PF00043 Glutathione S-transferase, C-terminal domain AVI_RS04560 PF13417 Glutathione S-transferase, N-terminal domain AVI_RS04565 PF12411 Choline sulfatase enzyme C terminal AVI_RS04565 PF00884 Sulfatase AVI_RS04570 PF00440 Bacterial regulatory proteins, tetR family AVI_RS04570 PF13977 BetI-type transcriptional repressor, C-terminal AVI_RS04575 PF00563 EAL domain AVI_RS04575 PF12792 CSS motif domain associated with EAL AVI_RS04585 PF02801 Beta-ketoacyl synthase, C-terminal domain AVI_RS04585 PF14765 Polyketide synthase dehydratase AVI_RS04585 PF00550 Phosphopantetheine attachment site AVI_RS04585 PF00109 Beta-ketoacyl synthase, N-terminal domain AVI_RS04585 PF00698 Acyl transferase domain AVI_RS04585 PF08659 KR domain AVI_RS04585 PF08240 Alcohol dehydrogenase GroES-like domain AVI_RS04585 PF00107 Zinc-binding dehydrogenase AVI_RS04585 PF16197 Ketoacyl-synthetase C-terminal extension AVI_RS04590 PF13340 Putative transposase of IS4/5 family (DUF4096) AVI_RS04595 PF01609 Transposase DDE domain AVI_RS04600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS04600 PF00672 HAMP domain AVI_RS04625 PF08220 DeoR-like helix-turn-helix domain AVI_RS04625 PF00455 DeoR C terminal sensor domain AVI_RS04645 PF00884 Sulfatase AVI_RS04645 PF08019 Phosphoethanolamine transferase EptA/EptB AVI_RS04675 PF07690 Major Facilitator Superfamily AVI_RS04685 PF00881 Nitroreductase family AVI_RS04710 PF17969 L,D-transpeptidase C-terminal domain AVI_RS04710 PF03734 L,D-transpeptidase catalytic domain AVI_RS04710 PF01476 LysM domain AVI_RS04715 PF17969 L,D-transpeptidase C-terminal domain AVI_RS04715 PF03734 L,D-transpeptidase catalytic domain AVI_RS04720 PF01047 MarR family AVI_RS04725 PF02566 OsmC-like protein AVI_RS04735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS04735 PF12282 Signal transduction histidine kinase AVI_RS04735 PF07568 Histidine kinase AVI_RS04740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS04740 PF13426 PAS domain AVI_RS04740 PF00072 Response regulator receiver domain AVI_RS04750 PF00156 Phosphoribosyl transferase domain AVI_RS04755 PF00672 HAMP domain AVI_RS04755 PF02203 Tar ligand binding domain homologue AVI_RS04755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS04760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS04760 PF02203 Tar ligand binding domain homologue AVI_RS04760 PF00672 HAMP domain AVI_RS04770 PF05872 Bacterial protein of unknown function (DUF853) AVI_RS04780 PF00391 PEP-utilising enzyme, mobile domain AVI_RS04780 PF00224 Pyruvate kinase, barrel domain AVI_RS04780 PF02887 Pyruvate kinase, alpha/beta domain AVI_RS04790 PF00672 HAMP domain AVI_RS04790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS04795 PF02673 Bacitracin resistance protein BacA AVI_RS04800 PF00005 ABC transporter AVI_RS04805 PF02653 Branched-chain amino acid transport system / permease component AVI_RS04810 PF13407 Periplasmic binding protein domain AVI_RS04815 PF01047 MarR family AVI_RS04815 PF00480 ROK family AVI_RS04835 PF00005 ABC transporter AVI_RS04840 PF01032 FecCD transport family AVI_RS04855 PF01209 ubiE/COQ5 methyltransferase family AVI_RS04860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS04860 PF03466 LysR substrate binding domain AVI_RS04865 PF07690 Major Facilitator Superfamily AVI_RS04870 PF00550 Phosphopantetheine attachment site AVI_RS04870 PF07993 Male sterility protein AVI_RS04905 PF00034 Cytochrome c AVI_RS04910 PF01322 Cytochrome C' AVI_RS04920 PF13302 Acetyltransferase (GNAT) domain AVI_RS04930 PF02525 Flavodoxin-like fold AVI_RS04935 PF01638 HxlR-like helix-turn-helix AVI_RS04945 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AVI_RS04945 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AVI_RS04950 PF03692 Putative zinc- or iron-chelating domain AVI_RS04960 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS04960 PF05231 MASE1 AVI_RS04960 PF08447 PAS fold AVI_RS04960 PF00563 EAL domain AVI_RS04960 PF08448 PAS fold AVI_RS04960 PF13426 PAS domain AVI_RS04965 PF01063 Amino-transferase class IV AVI_RS04970 PF07732 Multicopper oxidase AVI_RS04970 PF07731 Multicopper oxidase AVI_RS04975 PF06903 VirK protein AVI_RS04985 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AVI_RS04985 PF00326 Prolyl oligopeptidase family AVI_RS05015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVI_RS05020 PF00582 Universal stress protein family AVI_RS05030 PF01124 MAPEG family AVI_RS05035 PF03006 Haemolysin-III related AVI_RS05040 PF00325 Bacterial regulatory proteins, crp family AVI_RS05040 PF00027 Cyclic nucleotide-binding domain AVI_RS05045 PF00583 Acetyltransferase (GNAT) family AVI_RS05060 PF05443 ROS/MUCR transcriptional regulator protein AVI_RS05065 PF03334 Na+/H+ antiporter subunit AVI_RS05070 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AVI_RS05075 PF01899 Na+/H+ ion antiporter subunit AVI_RS05080 PF00361 Proton-conducting membrane transporter AVI_RS05085 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVI_RS05090 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AVI_RS05095 PF00361 Proton-conducting membrane transporter AVI_RS05095 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVI_RS05095 PF13244 Domain of unknown function (DUF4040) AVI_RS05100 PF01641 SelR domain AVI_RS05125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVI_RS05130 PF00005 ABC transporter AVI_RS05130 PF12704 MacB-like periplasmic core domain AVI_RS05130 PF02687 FtsX-like permease family AVI_RS05150 PF02657 Fe-S metabolism associated domain AVI_RS05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS05160 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS05175 PF00873 AcrB/AcrD/AcrF family AVI_RS05230 PF00905 Penicillin binding protein transpeptidase domain AVI_RS05230 PF00912 Transglycosylase AVI_RS05235 PF03692 Putative zinc- or iron-chelating domain AVI_RS05250 PF09278 MerR, DNA binding AVI_RS05250 PF00376 MerR family regulatory protein AVI_RS05270 PF04860 Phage portal protein AVI_RS05360 PF00486 Transcriptional regulatory protein, C terminal AVI_RS05360 PF00072 Response regulator receiver domain AVI_RS05365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS05370 PF16998 17 kDa outer membrane surface antigen AVI_RS05370 PF05433 Glycine zipper 2TM domain AVI_RS05380 PF03100 CcmE AVI_RS05385 PF01578 Cytochrome C assembly protein AVI_RS05385 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AVI_RS05390 PF03918 Cytochrome C biogenesis protein AVI_RS05395 PF13180 PDZ domain AVI_RS05400 PF00072 Response regulator receiver domain AVI_RS05400 PF00486 Transcriptional regulatory protein, C terminal AVI_RS05405 PF00672 HAMP domain AVI_RS05405 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS05405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS05410 PF03710 Glutamate-ammonia ligase adenylyltransferase AVI_RS05410 PF08335 GlnD PII-uridylyltransferase AVI_RS05415 PF00989 PAS fold AVI_RS05415 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS05415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS05420 PF01433 Peptidase family M1 domain AVI_RS05420 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AVI_RS05420 PF11940 Domain of unknown function (DUF3458) Ig-like fold AVI_RS05425 PF17202 Single cache domain 3 AVI_RS05425 PF00672 HAMP domain AVI_RS05425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS05450 PF00012 Hsp70 protein AVI_RS05460 PF00873 AcrB/AcrD/AcrF family AVI_RS05465 PF13533 Biotin-lipoyl like AVI_RS05480 PF01063 Amino-transferase class IV AVI_RS05500 PF00571 CBS domain AVI_RS05500 PF03448 MgtE intracellular N domain AVI_RS05500 PF01769 Divalent cation transporter AVI_RS05505 PF07690 Major Facilitator Superfamily AVI_RS05510 PF00781 Diacylglycerol kinase catalytic domain AVI_RS05515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVI_RS05515 PF00005 ABC transporter AVI_RS05520 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS05520 PF12911 N-terminal TM domain of oligopeptide transport permease C AVI_RS05525 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS05530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVI_RS05535 PF00120 Glutamine synthetase, catalytic domain AVI_RS05540 PF00202 Aminotransferase class-III AVI_RS05550 PF03551 Transcriptional regulator PadR-like family AVI_RS05555 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AVI_RS05560 PF00535 Glycosyl transferase family 2 AVI_RS05570 PF01048 Phosphorylase superfamily AVI_RS05570 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AVI_RS05580 PF02798 Glutathione S-transferase, N-terminal domain AVI_RS05580 PF00043 Glutathione S-transferase, C-terminal domain AVI_RS05595 PF00155 Aminotransferase class I and II AVI_RS05610 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI_RS05610 PF14759 Reductase C-terminal AVI_RS05615 PF02530 Porin subfamily AVI_RS05620 PF02530 Porin subfamily AVI_RS05635 PF01464 Transglycosylase SLT domain AVI_RS05635 PF14718 Soluble lytic murein transglycosylase L domain AVI_RS05640 PF00701 Dihydrodipicolinate synthetase family AVI_RS05645 PF01668 SmpB protein AVI_RS05655 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVI_RS05655 PF12833 Helix-turn-helix domain AVI_RS05655 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVI_RS05655 PF02805 Metal binding domain of Ada AVI_RS05660 PF02203 Tar ligand binding domain homologue AVI_RS05660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS05660 PF00672 HAMP domain AVI_RS05670 PF01192 RNA polymerase Rpb6 AVI_RS05675 PF02824 TGS domain AVI_RS05675 PF04607 Region found in RelA / SpoT proteins AVI_RS05675 PF13291 ACT domain AVI_RS05680 PF10502 Signal peptidase, peptidase S26 AVI_RS05685 PF00035 Double-stranded RNA binding motif AVI_RS05685 PF14622 Ribonuclease-III-like AVI_RS05690 PF01926 50S ribosome-binding GTPase AVI_RS05690 PF07650 KH domain AVI_RS05695 PF05145 Transition state regulatory protein AbrB AVI_RS05700 PF11967 Recombination protein O N terminal AVI_RS05700 PF02565 Recombination protein O C terminal AVI_RS05715 PF01966 HD domain AVI_RS05730 PF01966 HD domain AVI_RS05735 PF01571 Aminomethyltransferase folate-binding domain AVI_RS05755 PF00293 NUDIX domain AVI_RS05765 PF01066 CDP-alcohol phosphatidyltransferase AVI_RS05770 PF02666 Phosphatidylserine decarboxylase AVI_RS05775 PF00664 ABC transporter transmembrane region AVI_RS05775 PF00005 ABC transporter AVI_RS05780 PF04972 BON domain AVI_RS05780 PF01476 LysM domain AVI_RS05790 PF03641 Possible lysine decarboxylase AVI_RS05795 PF00892 EamA-like transporter family AVI_RS05800 PF00682 HMGL-like AVI_RS05800 PF08502 LeuA allosteric (dimerisation) domain AVI_RS05805 PF00561 alpha/beta hydrolase fold AVI_RS05825 PF01850 PIN domain AVI_RS05830 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AVI_RS05840 PF01406 tRNA synthetases class I (C) catalytic domain AVI_RS05845 PF00295 Glycosyl hydrolases family 28 AVI_RS05850 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AVI_RS05855 PF16363 GDP-mannose 4,6 dehydratase AVI_RS05860 PF04321 RmlD substrate binding domain AVI_RS05865 PF00483 Nucleotidyl transferase AVI_RS05880 PF00106 short chain dehydrogenase AVI_RS05885 PF00156 Phosphoribosyl transferase domain AVI_RS05885 PF13537 Glutamine amidotransferase domain AVI_RS05890 PF02674 Colicin V production protein AVI_RS05895 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVI_RS05895 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVI_RS05895 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVI_RS05900 PF16363 GDP-mannose 4,6 dehydratase AVI_RS05905 PF16363 GDP-mannose 4,6 dehydratase AVI_RS05910 PF06745 KaiC AVI_RS05910 PF18073 Rubredoxin metal binding domain AVI_RS05915 PF00842 Alanine racemase, C-terminal domain AVI_RS05915 PF01168 Alanine racemase, N-terminal domain AVI_RS05920 PF12833 Helix-turn-helix domain AVI_RS05920 PF02311 AraC-like ligand binding domain AVI_RS05925 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS05930 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS05935 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI_RS05940 PF00772 DnaB-like helicase N terminal domain AVI_RS05940 PF03796 DnaB-like helicase C terminal domain AVI_RS05945 PF01281 Ribosomal protein L9, N-terminal domain AVI_RS05945 PF03948 Ribosomal protein L9, C-terminal domain AVI_RS05955 PF01084 Ribosomal protein S18 AVI_RS05960 PF01250 Ribosomal protein S6 AVI_RS05970 PF16485 Protealysin propeptide AVI_RS05970 PF01447 Thermolysin metallopeptidase, catalytic domain AVI_RS05970 PF02868 Thermolysin metallopeptidase, alpha-helical domain AVI_RS05980 PF00248 Aldo/keto reductase family AVI_RS05985 PF00698 Acyl transferase domain AVI_RS05995 PF00550 Phosphopantetheine attachment site AVI_RS06000 PF00109 Beta-ketoacyl synthase, N-terminal domain AVI_RS06000 PF02801 Beta-ketoacyl synthase, C-terminal domain AVI_RS06005 PF02618 YceG-like family AVI_RS06010 PF03755 YicC-like family, N-terminal region AVI_RS06010 PF08340 Domain of unknown function (DUF1732) AVI_RS06015 PF00625 Guanylate kinase AVI_RS06020 PF08242 Methyltransferase domain AVI_RS06025 PF00398 Ribosomal RNA adenine dimethylase AVI_RS06030 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AVI_RS06040 PF03968 OstA-like protein AVI_RS06040 PF04453 LPS transport system D AVI_RS06055 PF01569 PAP2 superfamily AVI_RS06060 PF02789 Cytosol aminopeptidase family, N-terminal domain AVI_RS06060 PF00883 Cytosol aminopeptidase family, catalytic domain AVI_RS06070 PF00672 HAMP domain AVI_RS06070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS06070 PF02203 Tar ligand binding domain homologue AVI_RS06075 PF00005 ABC transporter AVI_RS06075 PF12848 ABC transporter AVI_RS06080 PF13417 Glutathione S-transferase, N-terminal domain AVI_RS06085 PF00334 Nucleoside diphosphate kinase AVI_RS06090 PF02391 MoaE protein AVI_RS06100 PF01066 CDP-alcohol phosphatidyltransferase AVI_RS06105 PF02151 UvrB/uvrC motif AVI_RS06105 PF08459 UvrC Helix-hairpin-helix N-terminal AVI_RS06105 PF12826 Helix-hairpin-helix motif AVI_RS06105 PF01541 GIY-YIG catalytic domain AVI_RS06115 PF13505 Outer membrane protein beta-barrel domain AVI_RS06120 PF13417 Glutathione S-transferase, N-terminal domain AVI_RS06120 PF00043 Glutathione S-transferase, C-terminal domain AVI_RS06125 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AVI_RS06130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVI_RS06130 PF00384 Molybdopterin oxidoreductase AVI_RS06130 PF01568 Molydopterin dinucleotide binding domain AVI_RS06135 PF00293 NUDIX domain AVI_RS06140 PF04273 Putative phosphatase (DUF442) AVI_RS06140 PF00753 Metallo-beta-lactamase superfamily AVI_RS06150 PF04143 Sulphur transport AVI_RS06160 PF01925 Sulfite exporter TauE/SafE AVI_RS06165 PF00551 Formyl transferase AVI_RS06170 PF00586 AIR synthase related protein, N-terminal domain AVI_RS06170 PF02769 AIR synthase related protein, C-terminal domain AVI_RS06175 PF01594 AI-2E family transporter AVI_RS06185 PF02503 Polyphosphate kinase middle domain AVI_RS06185 PF13090 Polyphosphate kinase C-terminal domain 2 AVI_RS06185 PF17941 Polyphosphate kinase C-terminal domain 1 AVI_RS06185 PF13089 Polyphosphate kinase N-terminal domain AVI_RS06190 PF02541 Ppx/GppA phosphatase family AVI_RS06195 PF01325 Iron dependent repressor, N-terminal DNA binding domain AVI_RS06195 PF02742 Iron dependent repressor, metal binding and dimerisation domain AVI_RS06200 PF01566 Natural resistance-associated macrophage protein AVI_RS06220 PF01612 3'-5' exonuclease AVI_RS06220 PF00570 HRDC domain AVI_RS06235 PF02938 GAD domain AVI_RS06235 PF00152 tRNA synthetases class II (D, K and N) AVI_RS06235 PF01336 OB-fold nucleic acid binding domain AVI_RS06250 PF03989 DNA gyrase C-terminal domain, beta-propeller AVI_RS06250 PF00521 DNA gyrase/topoisomerase IV, subunit A AVI_RS06255 PF03707 Bacterial signalling protein N terminal repeat AVI_RS06255 PF00563 EAL domain AVI_RS06255 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS06255 PF13188 PAS domain AVI_RS06265 PF00989 PAS fold AVI_RS06265 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS06265 PF01590 GAF domain AVI_RS06265 PF00563 EAL domain AVI_RS06270 PF04376 Arginine-tRNA-protein transferase, N terminus AVI_RS06270 PF04377 Arginine-tRNA-protein transferase, C terminus AVI_RS06280 PF00490 Delta-aminolevulinic acid dehydratase AVI_RS06300 PF00464 Serine hydroxymethyltransferase AVI_RS06305 PF03477 ATP cone domain AVI_RS06310 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVI_RS06310 PF01872 RibD C-terminal domain AVI_RS06315 PF00677 Lumazine binding domain AVI_RS06325 PF00885 6,7-dimethyl-8-ribityllumazine synthase AVI_RS06330 PF01029 NusB family AVI_RS06335 PF07690 Major Facilitator Superfamily AVI_RS06340 PF03030 Inorganic H+ pyrophosphatase AVI_RS06360 PF02504 Fatty acid synthesis protein AVI_RS06365 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVI_RS06365 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVI_RS06370 PF00216 Bacterial DNA-binding protein AVI_RS06375 PF13411 MerR HTH family regulatory protein AVI_RS06395 PF00589 Phage integrase family AVI_RS06395 PF02899 Phage integrase, N-terminal SAM-like domain AVI_RS06400 PF01695 IstB-like ATP binding protein AVI_RS06405 PF00665 Integrase core domain AVI_RS06415 PF00004 ATPase family associated with various cellular activities (AAA) AVI_RS06420 PF01965 DJ-1/PfpI family AVI_RS06425 PF01965 DJ-1/PfpI family AVI_RS06430 PF04717 Type VI secretion system, phage-baseplate injector AVI_RS06430 PF06715 Gp5 C-terminal repeat (3 copies) AVI_RS06460 PF00753 Metallo-beta-lactamase superfamily AVI_RS06485 PF00534 Glycosyl transferases group 1 AVI_RS06485 PF13579 Glycosyl transferase 4-like domain AVI_RS06495 PF02397 Bacterial sugar transferase AVI_RS06510 PF02706 Chain length determinant protein AVI_RS06525 PF02628 Cytochrome oxidase assembly protein AVI_RS06530 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AVI_RS06535 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AVI_RS06540 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVI_RS06545 PF00491 Arginase family AVI_RS06560 PF03992 Antibiotic biosynthesis monooxygenase AVI_RS06565 PF00380 Ribosomal protein S9/S16 AVI_RS06570 PF00572 Ribosomal protein L13 AVI_RS06575 PF13380 CoA binding domain AVI_RS06585 PF13380 CoA binding domain AVI_RS06590 PF01053 Cys/Met metabolism PLP-dependent enzyme AVI_RS06595 PF10518 TAT (twin-arginine translocation) pathway signal sequence AVI_RS06595 PF00149 Calcineurin-like phosphoesterase AVI_RS06605 PF00067 Cytochrome P450 AVI_RS06610 PF17151 Periplasmic sensor domain AVI_RS06610 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS06615 PF00574 Clp protease AVI_RS06620 PF06689 ClpX C4-type zinc finger AVI_RS06620 PF07724 AAA domain (Cdc48 subfamily) AVI_RS06620 PF10431 C-terminal, D2-small domain, of ClpB protein AVI_RS06625 PF00004 ATPase family associated with various cellular activities (AAA) AVI_RS06625 PF02190 ATP-dependent protease La (LON) substrate-binding domain AVI_RS06625 PF05362 Lon protease (S16) C-terminal proteolytic domain AVI_RS06630 PF00216 Bacterial DNA-binding protein AVI_RS06640 PF01047 MarR family AVI_RS06645 PF00501 AMP-binding enzyme AVI_RS06645 PF13193 AMP-binding enzyme C-terminal domain AVI_RS06650 PF00378 Enoyl-CoA hydratase/isomerase AVI_RS06685 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AVI_RS06690 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AVI_RS06695 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AVI_RS06700 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AVI_RS06715 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AVI_RS06715 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AVI_RS06715 PF10531 SLBB domain AVI_RS06720 PF00318 Ribosomal protein S2 AVI_RS06725 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVI_RS06725 PF00384 Molybdopterin oxidoreductase AVI_RS06725 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AVI_RS06730 PF00146 NADH dehydrogenase AVI_RS06735 PF12838 4Fe-4S dicluster domain AVI_RS06740 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AVI_RS06745 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVI_RS06750 PF00361 Proton-conducting membrane transporter AVI_RS06750 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVI_RS06755 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AVI_RS06755 PF00361 Proton-conducting membrane transporter AVI_RS06760 PF00361 Proton-conducting membrane transporter AVI_RS06765 PF03099 Biotin/lipoate A/B protein ligase family AVI_RS06765 PF02237 Biotin protein ligase C terminal domain AVI_RS06765 PF03309 Type III pantothenate kinase AVI_RS06770 PF12706 Beta-lactamase superfamily domain AVI_RS06770 PF17770 Ribonuclease J C-terminal domain AVI_RS06770 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AVI_RS06780 PF01042 Endoribonuclease L-PSP AVI_RS06795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVI_RS06795 PF03129 Anticodon binding domain AVI_RS06800 PF12704 MacB-like periplasmic core domain AVI_RS06800 PF02687 FtsX-like permease family AVI_RS06805 PF00005 ABC transporter AVI_RS06810 PF02811 PHP domain AVI_RS06810 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVI_RS06810 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVI_RS06810 PF14579 Helix-hairpin-helix motif AVI_RS06820 PF11799 impB/mucB/samB family C-terminal domain AVI_RS06820 PF00817 impB/mucB/samB family AVI_RS06835 PF00072 Response regulator receiver domain AVI_RS06840 PF00072 Response regulator receiver domain AVI_RS06840 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS06845 PF00471 Ribosomal protein L33 AVI_RS06850 PF07690 Major Facilitator Superfamily AVI_RS06860 PF17876 Cold shock domain AVI_RS06860 PF00575 S1 RNA binding domain AVI_RS06860 PF00773 RNB domain AVI_RS06860 PF08461 Ribonuclease R winged-helix domain AVI_RS06860 PF08206 Ribonuclease B OB domain AVI_RS06865 PF01131 DNA topoisomerase AVI_RS06865 PF01396 Topoisomerase DNA binding C4 zinc finger AVI_RS06865 PF13368 Topoisomerase C-terminal repeat AVI_RS06865 PF01751 Toprim domain AVI_RS06875 PF17782 DprA winged helix domain AVI_RS06875 PF02481 DNA recombination-mediator protein A AVI_RS06880 PF02660 Glycerol-3-phosphate acyltransferase AVI_RS06885 PF01979 Amidohydrolase family AVI_RS06890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVI_RS06890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVI_RS06895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVI_RS06895 PF02770 Acyl-CoA dehydrogenase, middle domain AVI_RS06895 PF18158 Adaptive response protein AidB N-terminal domain AVI_RS06900 PF00583 Acetyltransferase (GNAT) family AVI_RS06915 PF03652 Holliday junction resolvase AVI_RS06925 PF02686 Glu-tRNAGln amidotransferase C subunit AVI_RS06930 PF01425 Amidase AVI_RS06945 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AVI_RS06950 PF02684 Lipid-A-disaccharide synthetase AVI_RS06950 PF07578 Lipid A Biosynthesis N-terminal domain AVI_RS06955 PF00535 Glycosyl transferase family 2 AVI_RS06965 PF02934 GatB/GatE catalytic domain AVI_RS06965 PF02637 GatB domain AVI_RS06985 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) AVI_RS06990 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AVI_RS06995 PF02785 Biotin carboxylase C-terminal domain AVI_RS06995 PF00289 Biotin carboxylase, N-terminal domain AVI_RS06995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVI_RS07000 PF00364 Biotin-requiring enzyme AVI_RS07005 PF01220 Dehydroquinase class II AVI_RS07010 PF13462 Thioredoxin AVI_RS07015 PF00155 Aminotransferase class I and II AVI_RS07025 PF12111 Polyribonucleotide phosphorylase C terminal AVI_RS07025 PF10150 Ribonuclease E/G family AVI_RS07025 PF12111 Polyribonucleotide phosphorylase C terminal AVI_RS07025 PF10150 Ribonuclease E/G family AVI_RS07025 PF00575 S1 RNA binding domain AVI_RS07025 PF00575 S1 RNA binding domain AVI_RS07030 PF11741 AMIN domain AVI_RS07030 PF01520 N-acetylmuramoyl-L-alanine amidase AVI_RS07035 PF00905 Penicillin binding protein transpeptidase domain AVI_RS07035 PF17092 Penicillin-binding protein OB-like domain AVI_RS07035 PF00912 Transglycosylase AVI_RS07040 PF00472 RF-1 domain AVI_RS07040 PF03462 PCRF domain AVI_RS07045 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AVI_RS07055 PF01513 ATP-NAD kinase AVI_RS07070 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVI_RS07070 PF00588 SpoU rRNA Methylase family AVI_RS07085 PF03143 Elongation factor Tu C-terminal domain AVI_RS07085 PF03144 Elongation factor Tu domain 2 AVI_RS07085 PF00009 Elongation factor Tu GTP binding domain AVI_RS07110 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AVI_RS07115 PF00467 KOW motif AVI_RS07115 PF02357 Transcription termination factor nusG AVI_RS07120 PF00298 Ribosomal protein L11, RNA binding domain AVI_RS07120 PF03946 Ribosomal protein L11, N-terminal domain AVI_RS07125 PF00687 Ribosomal protein L1p/L10e family AVI_RS07130 PF00466 Ribosomal protein L10 AVI_RS07135 PF00542 Ribosomal protein L7/L12 C-terminal domain AVI_RS07135 PF16320 Ribosomal protein L7/L12 dimerisation domain AVI_RS07140 PF04560 RNA polymerase Rpb2, domain 7 AVI_RS07140 PF00562 RNA polymerase Rpb2, domain 6 AVI_RS07140 PF10385 RNA polymerase beta subunit external 1 domain AVI_RS07140 PF04565 RNA polymerase Rpb2, domain 3 AVI_RS07140 PF04561 RNA polymerase Rpb2, domain 2 AVI_RS07140 PF04563 RNA polymerase beta subunit AVI_RS07145 PF04997 RNA polymerase Rpb1, domain 1 AVI_RS07145 PF04983 RNA polymerase Rpb1, domain 3 AVI_RS07145 PF00623 RNA polymerase Rpb1, domain 2 AVI_RS07145 PF04998 RNA polymerase Rpb1, domain 5 AVI_RS07145 PF05000 RNA polymerase Rpb1, domain 4 AVI_RS07160 PF00164 Ribosomal protein S12/S23 AVI_RS07165 PF00177 Ribosomal protein S7p/S5e AVI_RS07170 PF03144 Elongation factor Tu domain 2 AVI_RS07170 PF00009 Elongation factor Tu GTP binding domain AVI_RS07170 PF03764 Elongation factor G, domain IV AVI_RS07170 PF00679 Elongation factor G C-terminus AVI_RS07170 PF14492 Elongation Factor G, domain II AVI_RS07175 PF03143 Elongation factor Tu C-terminal domain AVI_RS07175 PF03144 Elongation factor Tu domain 2 AVI_RS07175 PF00009 Elongation factor Tu GTP binding domain AVI_RS07180 PF00338 Ribosomal protein S10p/S20e AVI_RS07185 PF00297 Ribosomal protein L3 AVI_RS07190 PF00573 Ribosomal protein L4/L1 family AVI_RS07195 PF00276 Ribosomal protein L23 AVI_RS07200 PF03947 Ribosomal Proteins L2, C-terminal domain AVI_RS07200 PF00181 Ribosomal Proteins L2, RNA binding domain AVI_RS07205 PF00203 Ribosomal protein S19 AVI_RS07210 PF00237 Ribosomal protein L22p/L17e AVI_RS07215 PF07650 KH domain AVI_RS07215 PF00189 Ribosomal protein S3, C-terminal domain AVI_RS07220 PF00252 Ribosomal protein L16p/L10e AVI_RS07225 PF00831 Ribosomal L29 protein AVI_RS07230 PF00366 Ribosomal protein S17 AVI_RS07235 PF00238 Ribosomal protein L14p/L23e AVI_RS07240 PF00467 KOW motif AVI_RS07240 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AVI_RS07245 PF00281 Ribosomal protein L5 AVI_RS07245 PF00673 ribosomal L5P family C-terminus AVI_RS07250 PF00253 Ribosomal protein S14p/S29e AVI_RS07255 PF00410 Ribosomal protein S8 AVI_RS07260 PF00347 Ribosomal protein L6 AVI_RS07265 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AVI_RS07270 PF03719 Ribosomal protein S5, C-terminal domain AVI_RS07270 PF00333 Ribosomal protein S5, N-terminal domain AVI_RS07275 PF00327 Ribosomal protein L30p/L7e AVI_RS07280 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AVI_RS07285 PF00344 SecY translocase AVI_RS07290 PF05191 Adenylate kinase, active site lid AVI_RS07295 PF00416 Ribosomal protein S13/S18 AVI_RS07300 PF00411 Ribosomal protein S11 AVI_RS07305 PF01000 RNA polymerase Rpb3/RpoA insert domain AVI_RS07305 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AVI_RS07305 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AVI_RS07310 PF01196 Ribosomal protein L17 AVI_RS07330 PF00581 Rhodanese-like domain AVI_RS07335 PF02272 DHHA1 domain AVI_RS07335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVI_RS07335 PF01411 tRNA synthetases class II (A) AVI_RS07340 PF00291 Pyridoxal-phosphate dependent enzyme AVI_RS07345 PF03441 FAD binding domain of DNA photolyase AVI_RS07345 PF00875 DNA photolyase AVI_RS07355 PF01476 LysM domain AVI_RS07355 PF08525 Opacity-associated protein A N-terminal motif AVI_RS07355 PF01551 Peptidase family M23 AVI_RS07360 PF04305 Protein of unknown function (DUF455) AVI_RS07365 PF00578 AhpC/TSA family AVI_RS07380 PF00765 Autoinducer synthase AVI_RS07390 PF01515 Phosphate acetyl/butaryl transferase AVI_RS07390 PF03949 Malic enzyme, NAD binding domain AVI_RS07390 PF00390 Malic enzyme, N-terminal domain AVI_RS07400 PF02405 Permease MlaE AVI_RS07405 PF00005 ABC transporter AVI_RS07415 PF02470 MlaD protein AVI_RS07415 PF03886 ABC-type transport auxiliary lipoprotein component AVI_RS07420 PF00392 Bacterial regulatory proteins, gntR family AVI_RS07420 PF00155 Aminotransferase class I and II AVI_RS07445 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AVI_RS07450 PF01259 SAICAR synthetase AVI_RS07460 PF07519 Tannase and feruloyl esterase AVI_RS07465 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS07465 PF07694 5TMR of 5TMR-LYT AVI_RS07475 PF00180 Isocitrate/isopropylmalate dehydrogenase AVI_RS07480 PF00588 SpoU rRNA Methylase family AVI_RS07485 PF01177 Asp/Glu/Hydantoin racemase AVI_RS07495 PF01595 Cyclin M transmembrane N-terminal domain AVI_RS07495 PF00571 CBS domain AVI_RS07495 PF03471 Transporter associated domain AVI_RS07505 PF13472 GDSL-like Lipase/Acylhydrolase family AVI_RS07505 PF07859 alpha/beta hydrolase fold AVI_RS07510 PF07687 Peptidase dimerisation domain AVI_RS07510 PF01546 Peptidase family M20/M25/M40 AVI_RS07515 PF00484 Carbonic anhydrase AVI_RS07525 PF03741 Integral membrane protein TerC family AVI_RS07530 PF00163 Ribosomal protein S4/S9 N-terminal domain AVI_RS07530 PF01479 S4 domain AVI_RS07535 PF04960 Glutaminase AVI_RS07545 PF01171 PP-loop family AVI_RS07550 PF00459 Inositol monophosphatase family AVI_RS07555 PF00459 Inositol monophosphatase family AVI_RS07560 PF07690 Major Facilitator Superfamily AVI_RS07565 PF00462 Glutaredoxin AVI_RS07580 PF00586 AIR synthase related protein, N-terminal domain AVI_RS07580 PF02769 AIR synthase related protein, C-terminal domain AVI_RS07580 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AVI_RS07585 PF00226 DnaJ domain AVI_RS07585 PF01556 DnaJ C terminal domain AVI_RS07595 PF03099 Biotin/lipoate A/B protein ligase family AVI_RS07740 PF00483 Nucleotidyl transferase AVI_RS07745 PF04321 RmlD substrate binding domain AVI_RS07750 PF16363 GDP-mannose 4,6 dehydratase AVI_RS07755 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AVI_RS07845 PF14307 Glycosyltransferase WbsX AVI_RS07845 PF05045 Rhamnan synthesis protein F AVI_RS07850 PF00534 Glycosyl transferases group 1 AVI_RS07850 PF00535 Glycosyl transferase family 2 AVI_RS07890 PF02654 Cobalamin-5-phosphate synthase AVI_RS07895 PF02277 Phosphoribosyltransferase AVI_RS07900 PF01219 Prokaryotic diacylglycerol kinase AVI_RS07925 PF01327 Polypeptide deformylase AVI_RS07930 PF13545 Crp-like helix-turn-helix domain AVI_RS07930 PF00027 Cyclic nucleotide-binding domain AVI_RS07935 PF04055 Radical SAM superfamily AVI_RS07940 PF00550 Phosphopantetheine attachment site AVI_RS07945 PF07977 FabA-like domain AVI_RS07950 PF00109 Beta-ketoacyl synthase, N-terminal domain AVI_RS07950 PF02801 Beta-ketoacyl synthase, C-terminal domain AVI_RS07955 PF02801 Beta-ketoacyl synthase, C-terminal domain AVI_RS07955 PF00109 Beta-ketoacyl synthase, N-terminal domain AVI_RS07960 PF00107 Zinc-binding dehydrogenase AVI_RS07960 PF08240 Alcohol dehydrogenase GroES-like domain AVI_RS07975 PF02540 NAD synthase AVI_RS07975 PF00795 Carbon-nitrogen hydrolase AVI_RS07980 PF07676 WD40-like Beta Propeller Repeat AVI_RS07985 PF00881 Nitroreductase family AVI_RS07995 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVI_RS07995 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVI_RS08000 PF00579 tRNA synthetases class I (W and Y) AVI_RS08005 PF03702 Anhydro-N-acetylmuramic acid kinase AVI_RS08025 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS08025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS08025 PF00989 PAS fold AVI_RS08035 PF03167 Uracil DNA glycosylase superfamily AVI_RS08040 PF01037 Lrp/AsnC ligand binding domain AVI_RS08040 PF13404 AsnC-type helix-turn-helix domain AVI_RS08045 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVI_RS08045 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVI_RS08050 PF00561 alpha/beta hydrolase fold AVI_RS08055 PF08241 Methyltransferase domain AVI_RS08060 PF06233 Usg-like family AVI_RS08065 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS08070 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS08075 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI_RS08085 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AVI_RS08090 PF12804 MobA-like NTP transferase domain AVI_RS08100 PF04055 Radical SAM superfamily AVI_RS08100 PF06463 Molybdenum Cofactor Synthesis C AVI_RS08110 PF17158 Membrane-associated sensor, integral membrane domain AVI_RS08110 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS08115 PF05681 Fumarate hydratase (Fumerase) AVI_RS08115 PF05683 Fumarase C-terminus AVI_RS08120 PF10415 Fumarase C C-terminus AVI_RS08120 PF00206 Lyase AVI_RS08125 PF01471 Putative peptidoglycan binding domain AVI_RS08125 PF03734 L,D-transpeptidase catalytic domain AVI_RS08130 PF13419 Haloacid dehalogenase-like hydrolase AVI_RS08135 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AVI_RS08145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVI_RS08145 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI_RS08150 PF01474 Class-II DAHP synthetase family AVI_RS08165 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVI_RS08175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVI_RS08175 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AVI_RS08185 PF00360 Phytochrome region AVI_RS08185 PF01590 GAF domain AVI_RS08185 PF00563 EAL domain AVI_RS08185 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS08190 PF12344 Ultra-violet resistance protein B AVI_RS08190 PF17757 UvrB interaction domain AVI_RS08190 PF04851 Type III restriction enzyme, res subunit AVI_RS08190 PF00271 Helicase conserved C-terminal domain AVI_RS08190 PF02151 UvrB/uvrC motif AVI_RS08200 PF01979 Amidohydrolase family AVI_RS08220 PF00793 DAHP synthetase I family AVI_RS08225 PF03952 Enolase, N-terminal domain AVI_RS08225 PF00113 Enolase, C-terminal TIM barrel domain AVI_RS08235 PF00676 Dehydrogenase E1 component AVI_RS08240 PF02780 Transketolase, C-terminal domain AVI_RS08240 PF02779 Transketolase, pyrimidine binding domain AVI_RS08240 PF00364 Biotin-requiring enzyme AVI_RS08245 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVI_RS08245 PF00364 Biotin-requiring enzyme AVI_RS08245 PF02817 e3 binding domain AVI_RS08265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVI_RS08265 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI_RS08275 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AVI_RS08275 PF04055 Radical SAM superfamily AVI_RS08280 PF01202 Shikimate kinase AVI_RS08290 PF00083 Sugar (and other) transporter AVI_RS08290 PF07690 Major Facilitator Superfamily AVI_RS08295 PF03364 Polyketide cyclase / dehydrase and lipid transport AVI_RS08305 PF00994 Probable molybdopterin binding domain AVI_RS08305 PF18146 Damage-inducible protein CinA KH domain AVI_RS08305 PF02464 Competence-damaged protein AVI_RS08310 PF02542 YgbB family AVI_RS08310 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AVI_RS08315 PF01207 Dihydrouridine synthase (Dus) AVI_RS08320 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS08320 PF00989 PAS fold AVI_RS08320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS08325 PF02954 Bacterial regulatory protein, Fis family AVI_RS08325 PF00072 Response regulator receiver domain AVI_RS08325 PF00158 Sigma-54 interaction domain AVI_RS08330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS08330 PF00672 HAMP domain AVI_RS08330 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS08330 PF00989 PAS fold AVI_RS08335 PF00158 Sigma-54 interaction domain AVI_RS08335 PF00072 Response regulator receiver domain AVI_RS08335 PF02954 Bacterial regulatory protein, Fis family AVI_RS08345 PF17209 Hfq protein AVI_RS08350 PF01926 50S ribosome-binding GTPase AVI_RS08350 PF16360 GTP-binding GTPase Middle Region AVI_RS08350 PF13167 GTP-binding GTPase N-terminal AVI_RS08360 PF03819 MazG nucleotide pyrophosphohydrolase domain AVI_RS08370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVI_RS08370 PF10414 Sirohaem synthase dimerisation region AVI_RS08390 PF00970 Oxidoreductase FAD-binding domain AVI_RS08390 PF00175 Oxidoreductase NAD-binding domain AVI_RS08400 PF05036 Sporulation related domain AVI_RS08400 PF03330 Lytic transglycolase AVI_RS08405 PF07943 Penicillin-binding protein 5, C-terminal domain AVI_RS08405 PF00768 D-alanyl-D-alanine carboxypeptidase AVI_RS08410 PF02223 Thymidylate kinase AVI_RS08415 PF09115 DNA polymerase III, delta subunit, C terminal AVI_RS08420 PF01925 Sulfite exporter TauE/SafE AVI_RS08425 PF09334 tRNA synthetases class I (M) AVI_RS08425 PF08264 Anticodon-binding domain of tRNA AVI_RS08430 PF01026 TatD related DNase AVI_RS08435 PF03099 Biotin/lipoate A/B protein ligase family AVI_RS08435 PF12706 Beta-lactamase superfamily domain AVI_RS08440 PF00654 Voltage gated chloride channel AVI_RS08450 PF02683 Cytochrome C biogenesis protein transmembrane region AVI_RS08455 PF01494 FAD binding domain AVI_RS08465 PF00005 ABC transporter AVI_RS08470 PF02653 Branched-chain amino acid transport system / permease component AVI_RS08475 PF02653 Branched-chain amino acid transport system / permease component AVI_RS08480 PF02608 ABC transporter substrate-binding protein PnrA-like AVI_RS08485 PF14602 Hexapeptide repeat of succinyl-transferase AVI_RS08485 PF12804 MobA-like NTP transferase domain AVI_RS08485 PF00132 Bacterial transferase hexapeptide (six repeats) AVI_RS08490 PF01380 SIS domain AVI_RS08510 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS08515 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS08520 PF00005 ABC transporter AVI_RS08520 PF17912 MalK OB fold domain AVI_RS08530 PF00480 ROK family AVI_RS08530 PF01047 MarR family AVI_RS08535 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVI_RS08535 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVI_RS08540 PF01297 Zinc-uptake complex component A periplasmic AVI_RS08545 PF00005 ABC transporter AVI_RS08550 PF00950 ABC 3 transport family AVI_RS08555 PF01475 Ferric uptake regulator family AVI_RS08560 PF00132 Bacterial transferase hexapeptide (six repeats) AVI_RS08575 PF00768 D-alanyl-D-alanine carboxypeptidase AVI_RS08575 PF07943 Penicillin-binding protein 5, C-terminal domain AVI_RS08595 PF12951 Passenger-associated-transport-repeat AVI_RS08610 PF01734 Patatin-like phospholipase AVI_RS08615 PF01502 Phosphoribosyl-AMP cyclohydrolase AVI_RS08620 PF01227 GTP cyclohydrolase I AVI_RS08630 PF01809 Putative membrane protein insertion efficiency factor AVI_RS08635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVI_RS08635 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVI_RS08635 PF03129 Anticodon binding domain AVI_RS08635 PF02824 TGS domain AVI_RS08650 PF02445 Quinolinate synthetase A protein AVI_RS08655 PF00890 FAD binding domain AVI_RS08655 PF02910 Fumarate reductase flavoprotein C-term AVI_RS08660 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AVI_RS08660 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AVI_RS08695 PF00583 Acetyltransferase (GNAT) family AVI_RS08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS08700 PF00204 DNA gyrase B AVI_RS08700 PF01751 Toprim domain AVI_RS08700 PF00986 DNA gyrase B subunit, carboxyl terminus AVI_RS08710 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS08710 PF00072 Response regulator receiver domain AVI_RS08715 PF00121 Triosephosphate isomerase AVI_RS08720 PF03840 Preprotein translocase SecG subunit AVI_RS08725 PF00117 Glutamine amidotransferase class-I AVI_RS08725 PF06418 CTP synthase N-terminus AVI_RS08750 PF00111 2Fe-2S iron-sulfur cluster binding domain AVI_RS08760 PF00809 Pterin binding enzyme AVI_RS08770 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AVI_RS08780 PF02347 Glycine cleavage system P-protein AVI_RS08785 PF01597 Glycine cleavage H-protein AVI_RS08790 PF01571 Aminomethyltransferase folate-binding domain AVI_RS08790 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVI_RS08810 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AVI_RS08815 PF01479 S4 domain AVI_RS08815 PF00849 RNA pseudouridylate synthase AVI_RS08820 PF13419 Haloacid dehalogenase-like hydrolase AVI_RS08835 PF00083 Sugar (and other) transporter AVI_RS08850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVI_RS08850 PF07559 Flagellar basal body protein FlaE AVI_RS08850 PF00460 Flagella basal body rod protein AVI_RS08855 PF04002 RadC-like JAB domain AVI_RS08860 PF00557 Metallopeptidase family M24 AVI_RS08865 PF03466 LysR substrate binding domain AVI_RS08865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS08870 PF03601 Conserved hypothetical protein 698 AVI_RS08875 PF03749 Sugar fermentation stimulation protein RE domain AVI_RS08875 PF17746 SfsA N-terminal OB domain AVI_RS08880 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AVI_RS08890 PF00155 Aminotransferase class I and II AVI_RS08895 PF00742 Homoserine dehydrogenase AVI_RS08895 PF03447 Homoserine dehydrogenase, NAD binding domain AVI_RS08895 PF01842 ACT domain AVI_RS08900 PF02272 DHHA1 domain AVI_RS08900 PF17768 RecJ OB domain AVI_RS08900 PF01368 DHH family AVI_RS08925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVI_RS08930 PF00313 'Cold-shock' DNA-binding domain AVI_RS08955 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain AVI_RS08955 PF00589 Phage integrase family AVI_RS08975 PF02811 PHP domain AVI_RS08975 PF14579 Helix-hairpin-helix motif AVI_RS08975 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVI_RS08975 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVI_RS09000 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system AVI_RS09145 PF03869 Arc-like DNA binding domain AVI_RS09260 PF17191 RecG wedge domain AVI_RS09260 PF00270 DEAD/DEAH box helicase AVI_RS09260 PF00271 Helicase conserved C-terminal domain AVI_RS09270 PF17757 UvrB interaction domain AVI_RS09270 PF03461 TRCF domain AVI_RS09270 PF00271 Helicase conserved C-terminal domain AVI_RS09270 PF02559 CarD-like/TRCF domain AVI_RS09270 PF00270 DEAD/DEAH box helicase AVI_RS09280 PF00892 EamA-like transporter family AVI_RS09290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVI_RS09305 PF00120 Glutamine synthetase, catalytic domain AVI_RS09305 PF03951 Glutamine synthetase, beta-Grasp domain AVI_RS09310 PF00543 Nitrogen regulatory protein P-II AVI_RS09315 PF01256 Carbohydrate kinase AVI_RS09315 PF03853 YjeF-related protein N-terminus AVI_RS09330 PF17755 UvrA DNA-binding domain AVI_RS09330 PF17760 UvrA interaction domain AVI_RS09335 PF00436 Single-strand binding protein family AVI_RS09345 PF01914 MarC family integral membrane protein AVI_RS09350 PF03989 DNA gyrase C-terminal domain, beta-propeller AVI_RS09350 PF00521 DNA gyrase/topoisomerase IV, subunit A AVI_RS09355 PF00403 Heavy-metal-associated domain AVI_RS09360 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AVI_RS09360 PF12801 4Fe-4S binding domain AVI_RS09360 PF13746 4Fe-4S dicluster domain AVI_RS09365 PF05751 FixH AVI_RS09375 PF03597 Cytochrome oxidase maturation protein cbb3-type AVI_RS09380 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AVI_RS09380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVI_RS09385 PF12706 Beta-lactamase superfamily domain AVI_RS09395 PF01547 Bacterial extracellular solute-binding protein AVI_RS09400 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS09405 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS09410 PF00005 ABC transporter AVI_RS09410 PF17912 MalK OB fold domain AVI_RS09430 PF00248 Aldo/keto reductase family AVI_RS09435 PF04616 Glycosyl hydrolases family 43 AVI_RS09435 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AVI_RS09450 PF01794 Ferric reductase like transmembrane component AVI_RS09455 PF00174 Oxidoreductase molybdopterin binding domain AVI_RS09460 PF00920 Dehydratase family AVI_RS09465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVI_RS09475 PF01810 LysE type translocator AVI_RS09480 PF00206 Lyase AVI_RS09480 PF10397 Adenylosuccinate lyase C-terminus AVI_RS09490 PF00834 Ribulose-phosphate 3 epimerase family AVI_RS09495 PF00106 short chain dehydrogenase AVI_RS09505 PF01613 Flavin reductase like domain AVI_RS09515 PF00264 Common central domain of tyrosinase AVI_RS09530 PF00270 DEAD/DEAH box helicase AVI_RS09530 PF00271 Helicase conserved C-terminal domain AVI_RS09535 PF01810 LysE type translocator AVI_RS09540 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AVI_RS09545 PF00266 Aminotransferase class-V AVI_RS09550 PF01458 Uncharacterized protein family (UPF0051) AVI_RS09560 PF00005 ABC transporter AVI_RS09565 PF01458 Uncharacterized protein family (UPF0051) AVI_RS09575 PF00266 Aminotransferase class-V AVI_RS09580 PF01883 Iron-sulfur cluster assembly protein AVI_RS09585 PF01521 Iron-sulphur cluster biosynthesis AVI_RS09590 PF01467 Cytidylyltransferase-like AVI_RS09595 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVI_RS09600 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVI_RS09605 PF02547 Queuosine biosynthesis protein AVI_RS09610 PF01702 Queuine tRNA-ribosyltransferase AVI_RS09620 PF00149 Calcineurin-like phosphoesterase AVI_RS09630 PF02625 XdhC and CoxI family AVI_RS09630 PF13478 XdhC Rossmann domain AVI_RS09635 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVI_RS09635 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVI_RS09640 PF03450 CO dehydrogenase flavoprotein C-terminal domain AVI_RS09640 PF00941 FAD binding domain in molybdopterin dehydrogenase AVI_RS09645 PF00111 2Fe-2S iron-sulfur cluster binding domain AVI_RS09645 PF10518 TAT (twin-arginine translocation) pathway signal sequence AVI_RS09645 PF01799 [2Fe-2S] binding domain AVI_RS09650 PF00440 Bacterial regulatory proteins, tetR family AVI_RS09660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS09660 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS09660 PF08448 PAS fold AVI_RS09660 PF13188 PAS domain AVI_RS09660 PF00072 Response regulator receiver domain AVI_RS09670 PF01258 Prokaryotic dksA/traR C4-type zinc finger AVI_RS09680 PF04317 YcjX-like family, DUF463 AVI_RS09685 PF05128 Domain of unknown function (DUF697) AVI_RS09695 PF00491 Arginase family AVI_RS09700 PF00155 Aminotransferase class I and II AVI_RS09705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVI_RS09705 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI_RS09710 PF12706 Beta-lactamase superfamily domain AVI_RS09715 PF05698 Bacterial trigger factor protein (TF) C-terminus AVI_RS09715 PF05697 Bacterial trigger factor protein (TF) AVI_RS09715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVI_RS09745 PF16193 AAA C-terminal domain AVI_RS09745 PF12002 MgsA AAA+ ATPase C terminal AVI_RS09745 PF00004 ATPase family associated with various cellular activities (AAA) AVI_RS09750 PF13180 PDZ domain AVI_RS09750 PF00595 PDZ domain AVI_RS09765 PF17763 Glutaminase/Asparaginase C-terminal domain AVI_RS09765 PF00710 Asparaginase, N-terminal AVI_RS09775 PF00149 Calcineurin-like phosphoesterase AVI_RS09775 PF02872 5'-nucleotidase, C-terminal domain AVI_RS09785 PF00535 Glycosyl transferase family 2 AVI_RS09790 PF00585 C-terminal regulatory domain of Threonine dehydratase AVI_RS09790 PF00291 Pyridoxal-phosphate dependent enzyme AVI_RS09805 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS09810 PF00005 ABC transporter AVI_RS09815 PF09347 Domain of unknown function (DUF1989) AVI_RS09825 PF02785 Biotin carboxylase C-terminal domain AVI_RS09825 PF18140 Propionyl-coenzyme A carboxylase BT domain AVI_RS09825 PF00289 Biotin carboxylase, N-terminal domain AVI_RS09825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVI_RS09825 PF00364 Biotin-requiring enzyme AVI_RS09845 PF00107 Zinc-binding dehydrogenase AVI_RS09845 PF08240 Alcohol dehydrogenase GroES-like domain AVI_RS09850 PF13673 Acetyltransferase (GNAT) domain AVI_RS09855 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AVI_RS09865 PF00756 Putative esterase AVI_RS09870 PF02684 Lipid-A-disaccharide synthetase AVI_RS09880 PF00132 Bacterial transferase hexapeptide (six repeats) AVI_RS09880 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AVI_RS09885 PF07977 FabA-like domain AVI_RS09890 PF00132 Bacterial transferase hexapeptide (six repeats) AVI_RS09890 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AVI_RS09895 PF07244 Surface antigen variable number repeat AVI_RS09895 PF01103 Surface antigen AVI_RS09900 PF17820 PDZ domain AVI_RS09900 PF02163 Peptidase family M50 AVI_RS09910 PF01255 Putative undecaprenyl diphosphate synthase AVI_RS09915 PF01765 Ribosome recycling factor AVI_RS09920 PF00696 Amino acid kinase family AVI_RS09925 PF00889 Elongation factor TS AVI_RS09930 PF00318 Ribosomal protein S2 AVI_RS09955 PF01230 HIT domain AVI_RS09970 PF10431 C-terminal, D2-small domain, of ClpB protein AVI_RS09970 PF02861 Clp amino terminal domain, pathogenicity island component AVI_RS09970 PF17871 AAA lid domain AVI_RS09970 PF07724 AAA domain (Cdc48 subfamily) AVI_RS09970 PF00004 ATPase family associated with various cellular activities (AAA) AVI_RS09975 PF02617 ATP-dependent Clp protease adaptor protein ClpS AVI_RS09990 PF06426 Serine acetyltransferase, N-terminal AVI_RS09990 PF00132 Bacterial transferase hexapeptide (six repeats) AVI_RS10000 PF00561 alpha/beta hydrolase fold AVI_RS10015 PF01494 FAD binding domain AVI_RS10020 PF01053 Cys/Met metabolism PLP-dependent enzyme AVI_RS10025 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI_RS10030 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS10035 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS10040 PF00005 ABC transporter AVI_RS10045 PF01425 Amidase AVI_RS10050 PF01425 Amidase AVI_RS10055 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVI_RS10055 PF01411 tRNA synthetases class II (A) AVI_RS10055 PF02272 DHHA1 domain AVI_RS10060 PF00154 recA bacterial DNA recombination protein AVI_RS10070 PF04227 Indigoidine synthase A like protein AVI_RS10075 PF00717 Peptidase S24-like AVI_RS10075 PF01726 LexA DNA binding domain AVI_RS10080 PF00753 Metallo-beta-lactamase superfamily AVI_RS10080 PF03772 Competence protein AVI_RS10085 PF00285 Citrate synthase, C-terminal domain AVI_RS10095 PF02885 Glycosyl transferase family, helical bundle domain AVI_RS10095 PF00591 Glycosyl transferase family, a/b domain AVI_RS10100 PF00218 Indole-3-glycerol phosphate synthase AVI_RS10105 PF01967 MoaC family AVI_RS10110 PF03453 MoeA N-terminal region (domain I and II) AVI_RS10110 PF00994 Probable molybdopterin binding domain AVI_RS10110 PF03454 MoeA C-terminal region (domain IV) AVI_RS10115 PF01569 PAP2 superfamily AVI_RS10120 PF07685 CobB/CobQ-like glutamine amidotransferase domain AVI_RS10130 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS10135 PF00571 CBS domain AVI_RS10135 PF00005 ABC transporter AVI_RS10155 PF09992 Phosphodiester glycosidase AVI_RS10165 PF00551 Formyl transferase AVI_RS10170 PF00067 Cytochrome P450 AVI_RS10175 PF03466 LysR substrate binding domain AVI_RS10175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS10190 PF01965 DJ-1/PfpI family AVI_RS10190 PF12833 Helix-turn-helix domain AVI_RS10205 PF13419 Haloacid dehalogenase-like hydrolase AVI_RS10210 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AVI_RS10220 PF10502 Signal peptidase, peptidase S26 AVI_RS10225 PF02867 Ribonucleotide reductase, barrel domain AVI_RS10225 PF08471 Class II vitamin B12-dependent ribonucleotide reductase AVI_RS10230 PF00672 HAMP domain AVI_RS10230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS10240 PF00156 Phosphoribosyl transferase domain AVI_RS10250 PF00994 Probable molybdopterin binding domain AVI_RS10250 PF18146 Damage-inducible protein CinA KH domain AVI_RS10250 PF02464 Competence-damaged protein AVI_RS10255 PF00672 HAMP domain AVI_RS10255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS10265 PF01584 CheW-like domain AVI_RS10275 PF03313 Serine dehydratase alpha chain AVI_RS10275 PF03315 Serine dehydratase beta chain AVI_RS10295 PF00376 MerR family regulatory protein AVI_RS10295 PF09278 MerR, DNA binding AVI_RS10300 PF01769 Divalent cation transporter AVI_RS10300 PF00571 CBS domain AVI_RS10300 PF03448 MgtE intracellular N domain AVI_RS10305 PF03186 CobD/Cbib protein AVI_RS10310 PF00155 Aminotransferase class I and II AVI_RS10315 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVI_RS10315 PF07685 CobB/CobQ-like glutamine amidotransferase domain AVI_RS10320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVI_RS10325 PF01888 CbiD AVI_RS10330 PF02571 Precorrin-6x reductase CbiJ/CobK AVI_RS10345 PF01156 Inosine-uridine preferring nucleoside hydrolase AVI_RS10350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVI_RS10355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVI_RS10360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVI_RS10365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVI_RS10375 PF01903 CbiX AVI_RS10385 PF01925 Sulfite exporter TauE/SafE AVI_RS10390 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AVI_RS10400 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AVI_RS10405 PF02514 CobN/Magnesium Chelatase AVI_RS10410 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVI_RS10410 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVI_RS10415 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AVI_RS10430 PF01134 Glucose inhibited division protein A AVI_RS10450 PF02355 Protein export membrane protein AVI_RS10450 PF07549 SecD/SecF GG Motif AVI_RS10455 PF02699 Preprotein translocase subunit AVI_RS10465 PF01476 LysM domain AVI_RS10465 PF01551 Peptidase family M23 AVI_RS10475 PF01975 Survival protein SurE AVI_RS10480 PF02403 Seryl-tRNA synthetase N-terminal domain AVI_RS10480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVI_RS10485 PF00902 Sec-independent protein translocase protein (TatC) AVI_RS10495 PF02416 mttA/Hcf106 family AVI_RS10500 PF04079 Segregation and condensation complex subunit ScpB AVI_RS10505 PF02616 Segregation and condensation protein ScpA AVI_RS10510 PF00933 Glycosyl hydrolase family 3 N terminal domain AVI_RS10520 PF03485 Arginyl tRNA synthetase N terminal domain AVI_RS10520 PF05746 DALR anticodon binding domain AVI_RS10520 PF00750 tRNA synthetases class I (R) AVI_RS10525 PF13286 Phosphohydrolase-associated domain AVI_RS10525 PF01966 HD domain AVI_RS10530 PF01521 Iron-sulphur cluster biosynthesis AVI_RS10540 PF08238 Sel1 repeat AVI_RS10555 PF08264 Anticodon-binding domain of tRNA AVI_RS10555 PF00133 tRNA synthetases class I (I, L, M and V) AVI_RS10555 PF10458 Valyl tRNA synthetase tRNA binding arm AVI_RS10565 PF02321 Outer membrane efflux protein AVI_RS10595 PF00459 Inositol monophosphatase family AVI_RS10600 PF03009 Glycerophosphoryl diester phosphodiesterase family AVI_RS10605 PF12911 N-terminal TM domain of oligopeptide transport permease C AVI_RS10605 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS10610 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS10615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVI_RS10615 PF00005 ABC transporter AVI_RS10620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVI_RS10620 PF00005 ABC transporter AVI_RS10625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVI_RS10630 PF08220 DeoR-like helix-turn-helix domain AVI_RS10630 PF00455 DeoR C terminal sensor domain AVI_RS10635 PF03466 LysR substrate binding domain AVI_RS10635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS10645 PF00005 ABC transporter AVI_RS10645 PF08402 TOBE domain AVI_RS10650 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS10655 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS10660 PF01266 FAD dependent oxidoreductase AVI_RS10670 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI_RS10670 PF04324 BFD-like [2Fe-2S] binding domain AVI_RS10675 PF01042 Endoribonuclease L-PSP AVI_RS10685 PF02224 Cytidylate kinase AVI_RS10690 PF02371 Transposase IS116/IS110/IS902 family AVI_RS10690 PF01548 Transposase AVI_RS10715 PF01061 ABC-2 type transporter AVI_RS10720 PF00005 ABC transporter AVI_RS10725 PF00072 Response regulator receiver domain AVI_RS10730 PF01266 FAD dependent oxidoreductase AVI_RS10730 PF16350 FAD dependent oxidoreductase central domain AVI_RS10730 PF01571 Aminomethyltransferase folate-binding domain AVI_RS10730 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVI_RS10740 PF08241 Methyltransferase domain AVI_RS10745 PF12794 Mechanosensitive ion channel inner membrane domain 1 AVI_RS10745 PF00924 Mechanosensitive ion channel AVI_RS10745 PF12795 Mechanosensitive ion channel porin domain AVI_RS10760 PF01497 Periplasmic binding protein AVI_RS10765 PF01032 FecCD transport family AVI_RS10770 PF00005 ABC transporter AVI_RS10790 PF04185 Phosphoesterase family AVI_RS10800 PF03852 DNA mismatch endonuclease Vsr AVI_RS10805 PF00145 C-5 cytosine-specific DNA methylase AVI_RS10810 PF01119 DNA mismatch repair protein, C-terminal domain AVI_RS10810 PF08676 MutL C terminal dimerisation domain AVI_RS10845 PF01527 Transposase AVI_RS10850 PF00665 Integrase core domain AVI_RS10850 PF13276 HTH-like domain AVI_RS10850 PF13333 Integrase core domain AVI_RS10870 PF04717 Type VI secretion system, phage-baseplate injector AVI_RS10870 PF06715 Gp5 C-terminal repeat (3 copies) AVI_RS10945 PF02567 Phenazine biosynthesis-like protein AVI_RS10960 PF08447 PAS fold AVI_RS10960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS10960 PF13426 PAS domain AVI_RS10970 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AVI_RS10970 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AVI_RS10980 PF01625 Peptide methionine sulfoxide reductase AVI_RS11000 PF01037 Lrp/AsnC ligand binding domain AVI_RS11005 PF01177 Asp/Glu/Hydantoin racemase AVI_RS11010 PF00440 Bacterial regulatory proteins, tetR family AVI_RS11015 PF07690 Major Facilitator Superfamily AVI_RS11020 PF08447 PAS fold AVI_RS11020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS11020 PF13426 PAS domain AVI_RS11025 PF01638 HxlR-like helix-turn-helix AVI_RS11035 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AVI_RS11040 PF07739 TipAS antibiotic-recognition domain AVI_RS11040 PF13411 MerR HTH family regulatory protein AVI_RS11045 PF13538 UvrD-like helicase C-terminal domain AVI_RS11045 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AVI_RS11045 PF14490 Helix-hairpin-helix containing domain AVI_RS11055 PF00248 Aldo/keto reductase family AVI_RS11065 PF10369 Small subunit of acetolactate synthase AVI_RS11070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVI_RS11070 PF00205 Thiamine pyrophosphate enzyme, central domain AVI_RS11070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVI_RS11100 PF13302 Acetyltransferase (GNAT) domain AVI_RS11105 PF13180 PDZ domain AVI_RS11110 PF01145 SPFH domain / Band 7 family AVI_RS11115 PF01145 SPFH domain / Band 7 family AVI_RS11120 PF00186 Dihydrofolate reductase AVI_RS11125 PF07681 DoxX AVI_RS11130 PF00303 Thymidylate synthase AVI_RS11165 PF02913 FAD linked oxidases, C-terminal domain AVI_RS11165 PF01565 FAD binding domain AVI_RS11170 PF00005 ABC transporter AVI_RS11175 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS11180 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS11185 PF12849 PBP superfamily domain AVI_RS11195 PF00580 UvrD/REP helicase N-terminal domain AVI_RS11195 PF13361 UvrD-like helicase C-terminal domain AVI_RS11220 PF01011 PQQ enzyme repeat AVI_RS11225 PF00857 Isochorismatase family AVI_RS11230 PF02569 Pantoate-beta-alanine ligase AVI_RS11235 PF02548 Ketopantoate hydroxymethyltransferase AVI_RS11245 PF00890 FAD binding domain AVI_RS11245 PF02910 Fumarate reductase flavoprotein C-term AVI_RS11270 PF00557 Metallopeptidase family M24 AVI_RS11270 PF01321 Creatinase/Prolidase N-terminal domain AVI_RS11280 PF02630 SCO1/SenC AVI_RS11285 PF00672 HAMP domain AVI_RS11285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS11290 PF01584 CheW-like domain AVI_RS11305 PF02811 PHP domain AVI_RS11305 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVI_RS11305 PF14579 Helix-hairpin-helix motif AVI_RS11305 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVI_RS11305 PF00929 Exonuclease AVI_RS11305 PF11490 DNA polymerase III polC-type N-terminus II AVI_RS11315 PF02203 Tar ligand binding domain homologue AVI_RS11315 PF00672 HAMP domain AVI_RS11315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS11320 PF00583 Acetyltransferase (GNAT) family AVI_RS11325 PF00271 Helicase conserved C-terminal domain AVI_RS11325 PF00270 DEAD/DEAH box helicase AVI_RS11330 PF01593 Flavin containing amine oxidoreductase AVI_RS11345 PF12826 Helix-hairpin-helix motif AVI_RS11345 PF01653 NAD-dependent DNA ligase adenylation domain AVI_RS11345 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AVI_RS11345 PF03120 NAD-dependent DNA ligase OB-fold domain AVI_RS11345 PF00533 BRCA1 C Terminus (BRCT) domain AVI_RS11355 PF13091 PLD-like domain AVI_RS11355 PF13396 Phospholipase_D-nuclease N-terminal AVI_RS11360 PF02463 RecF/RecN/SMC N terminal domain AVI_RS11365 PF13525 Outer membrane lipoprotein AVI_RS11370 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AVI_RS11375 PF00091 Tubulin/FtsZ family, GTPase domain AVI_RS11375 PF12327 FtsZ family, C-terminal domain AVI_RS11380 PF02491 SHS2 domain inserted in FTSA AVI_RS11385 PF03799 Cell division protein FtsQ AVI_RS11385 PF08478 POTRA domain, FtsQ-type AVI_RS11390 PF07478 D-ala D-ala ligase C-terminus AVI_RS11390 PF01820 D-ala D-ala ligase N-terminus AVI_RS11400 PF07690 Major Facilitator Superfamily AVI_RS11400 PF00083 Sugar (and other) transporter AVI_RS11405 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AVI_RS11405 PF01565 FAD binding domain AVI_RS11410 PF01225 Mur ligase family, catalytic domain AVI_RS11410 PF08245 Mur ligase middle domain AVI_RS11410 PF02875 Mur ligase family, glutamate ligase domain AVI_RS11415 PF03033 Glycosyltransferase family 28 N-terminal domain AVI_RS11415 PF04101 Glycosyltransferase family 28 C-terminal domain AVI_RS11420 PF01098 Cell cycle protein AVI_RS11425 PF08245 Mur ligase middle domain AVI_RS11430 PF00953 Glycosyl transferase family 4 AVI_RS11430 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AVI_RS11435 PF01225 Mur ligase family, catalytic domain AVI_RS11435 PF08245 Mur ligase middle domain AVI_RS11435 PF02875 Mur ligase family, glutamate ligase domain AVI_RS11440 PF02875 Mur ligase family, glutamate ligase domain AVI_RS11440 PF01225 Mur ligase family, catalytic domain AVI_RS11440 PF08245 Mur ligase middle domain AVI_RS11445 PF00905 Penicillin binding protein transpeptidase domain AVI_RS11445 PF03717 Penicillin-binding Protein dimerisation domain AVI_RS11455 PF01795 MraW methylase family AVI_RS11460 PF02381 MraZ protein, putative antitoxin-like AVI_RS11475 PF01510 N-acetylmuramoyl-L-alanine amidase AVI_RS11480 PF05099 Tellurite resistance protein TerB AVI_RS11480 PF00226 DnaJ domain AVI_RS11485 PF00365 Phosphofructokinase AVI_RS11515 PF01183 Glycosyl hydrolases family 25 AVI_RS11530 PF01965 DJ-1/PfpI family AVI_RS11530 PF12833 Helix-turn-helix domain AVI_RS11535 PF02219 Methylenetetrahydrofolate reductase AVI_RS11540 PF01209 ubiE/COQ5 methyltransferase family AVI_RS11545 PF00672 HAMP domain AVI_RS11545 PF02203 Tar ligand binding domain homologue AVI_RS11545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS11550 PF00672 HAMP domain AVI_RS11550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS11550 PF02203 Tar ligand binding domain homologue AVI_RS11555 PF00005 ABC transporter AVI_RS11555 PF12848 ABC transporter AVI_RS11560 PF00445 Ribonuclease T2 family AVI_RS11565 PF12146 Serine aminopeptidase, S33 AVI_RS11570 PF00892 EamA-like transporter family AVI_RS11575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVI_RS11575 PF00205 Thiamine pyrophosphate enzyme, central domain AVI_RS11575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVI_RS11585 PF02627 Carboxymuconolactone decarboxylase family AVI_RS11590 PF01042 Endoribonuclease L-PSP AVI_RS11605 PF03734 L,D-transpeptidase catalytic domain AVI_RS11605 PF01476 LysM domain AVI_RS11610 PF07015 VirC1 protein AVI_RS11615 PF00465 Iron-containing alcohol dehydrogenase AVI_RS11630 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS11635 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS11640 PF00005 ABC transporter AVI_RS11640 PF08402 TOBE domain AVI_RS11645 PF13426 PAS domain AVI_RS11645 PF08447 PAS fold AVI_RS11645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS11655 PF00155 Aminotransferase class I and II AVI_RS11670 PF01381 Helix-turn-helix AVI_RS11685 PF09278 MerR, DNA binding AVI_RS11685 PF00376 MerR family regulatory protein AVI_RS11700 PF02310 B12 binding domain AVI_RS11700 PF02607 B12 binding domain AVI_RS11700 PF02965 Vitamin B12 dependent methionine synthase, activation domain AVI_RS11700 PF02574 Homocysteine S-methyltransferase AVI_RS11700 PF00809 Pterin binding enzyme AVI_RS11730 PF00392 Bacterial regulatory proteins, gntR family AVI_RS11730 PF00155 Aminotransferase class I and II AVI_RS11735 PF00892 EamA-like transporter family AVI_RS11740 PF13505 Outer membrane protein beta-barrel domain AVI_RS11745 PF04402 Protein of unknown function (DUF541) AVI_RS11825 PF07030 Protein of unknown function (DUF1320) AVI_RS11835 PF10124 Mu-like prophage major head subunit gpT AVI_RS11855 PF06074 Protein of unknown function (DUF935) AVI_RS11860 PF03237 Terminase-like family AVI_RS12035 PF00665 Integrase core domain AVI_RS12175 PF00012 Hsp70 protein AVI_RS12205 PF00313 'Cold-shock' DNA-binding domain AVI_RS12215 PF03275 UDP-galactopyranose mutase AVI_RS12240 PF01894 Uncharacterised protein family UPF0047 AVI_RS12245 PF13185 GAF domain AVI_RS12245 PF00563 EAL domain AVI_RS12245 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS12255 PF03466 LysR substrate binding domain AVI_RS12260 PF01810 LysE type translocator AVI_RS12270 PF01546 Peptidase family M20/M25/M40 AVI_RS12270 PF07687 Peptidase dimerisation domain AVI_RS12280 PF04542 Sigma-70 region 2 AVI_RS12280 PF04545 Sigma-70, region 4 AVI_RS12280 PF04539 Sigma-70 region 3 AVI_RS12280 PF00140 Sigma-70 factor, region 1.2 AVI_RS12280 PF04546 Sigma-70, non-essential region AVI_RS12280 PF03979 Sigma-70 factor, region 1.1 AVI_RS12285 PF01807 CHC2 zinc finger AVI_RS12285 PF08275 DNA primase catalytic core, N-terminal domain AVI_RS12285 PF08278 DNA primase DnaG DnaB-binding AVI_RS12285 PF10410 DnaB-helicase binding domain of primase AVI_RS12290 PF02632 BioY family AVI_RS12295 PF04055 Radical SAM superfamily AVI_RS12295 PF06968 Biotin and Thiamin Synthesis associated domain AVI_RS12305 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AVI_RS12305 PF00117 Glutamine amidotransferase class-I AVI_RS12310 PF01554 MatE AVI_RS12315 PF03466 LysR substrate binding domain AVI_RS12315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS12320 PF00248 Aldo/keto reductase family AVI_RS12325 PF04228 Putative neutral zinc metallopeptidase AVI_RS12340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVI_RS12340 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AVI_RS12340 PF02142 MGS-like domain AVI_RS12350 PF03449 Transcription elongation factor, N-terminal AVI_RS12350 PF01272 Transcription elongation factor, GreA/GreB, C-term AVI_RS12355 PF00534 Glycosyl transferases group 1 AVI_RS12390 PF01037 Lrp/AsnC ligand binding domain AVI_RS12395 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI_RS12400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS12400 PF03466 LysR substrate binding domain AVI_RS12410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVI_RS12420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS12420 PF03466 LysR substrate binding domain AVI_RS12430 PF01699 Sodium/calcium exchanger protein AVI_RS12440 PF00155 Aminotransferase class I and II AVI_RS12455 PF00313 'Cold-shock' DNA-binding domain AVI_RS12460 PF00753 Metallo-beta-lactamase superfamily AVI_RS12470 PF12802 MarR family AVI_RS12475 PF00486 Transcriptional regulatory protein, C terminal AVI_RS12475 PF00072 Response regulator receiver domain AVI_RS12480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS12480 PF00672 HAMP domain AVI_RS12480 PF16527 Two-component sensor protein CpxA, periplasmic domain AVI_RS12480 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS12485 PF01588 Putative tRNA binding domain AVI_RS12490 PF03807 NADP oxidoreductase coenzyme F420-dependent AVI_RS12490 PF14748 Pyrroline-5-carboxylate reductase dimerisation AVI_RS12505 PF01790 Prolipoprotein diacylglyceryl transferase AVI_RS12515 PF02578 Multi-copper polyphenol oxidoreductase laccase AVI_RS12520 PF05195 Aminopeptidase P, N-terminal domain AVI_RS12520 PF00557 Metallopeptidase family M24 AVI_RS12535 PF14572 Phosphoribosyl synthetase-associated domain AVI_RS12535 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AVI_RS12550 PF00171 Aldehyde dehydrogenase family AVI_RS12555 PF13426 PAS domain AVI_RS12555 PF02954 Bacterial regulatory protein, Fis family AVI_RS12555 PF00158 Sigma-54 interaction domain AVI_RS12560 PF14693 Ribosomal protein TL5, C-terminal domain AVI_RS12560 PF01386 Ribosomal L25p family AVI_RS12565 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS12565 PF03707 Bacterial signalling protein N terminal repeat AVI_RS12565 PF00563 EAL domain AVI_RS12575 PF01195 Peptidyl-tRNA hydrolase AVI_RS12590 PF02617 ATP-dependent Clp protease adaptor protein ClpS AVI_RS12595 PF06071 Protein of unknown function (DUF933) AVI_RS12595 PF01926 50S ribosome-binding GTPase AVI_RS12615 PF00255 Glutathione peroxidase AVI_RS12625 PF00156 Phosphoribosyl transferase domain AVI_RS12630 PF00032 Cytochrome b(C-terminal)/b6/petD AVI_RS12630 PF00033 Cytochrome b/b6/petB AVI_RS12630 PF02167 Cytochrome C1 family AVI_RS12635 PF00032 Cytochrome b(C-terminal)/b6/petD AVI_RS12635 PF00033 Cytochrome b/b6/petB AVI_RS12640 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AVI_RS12640 PF00355 Rieske [2Fe-2S] domain AVI_RS12655 PF00664 ABC transporter transmembrane region AVI_RS12655 PF00005 ABC transporter AVI_RS12660 PF00583 Acetyltransferase (GNAT) family AVI_RS12665 PF00005 ABC transporter AVI_RS12665 PF00664 ABC transporter transmembrane region AVI_RS12670 PF00588 SpoU rRNA Methylase family AVI_RS12685 PF00669 Bacterial flagellin N-terminal helical region AVI_RS12685 PF00700 Bacterial flagellin C-terminal helical region AVI_RS12695 PF01218 Coproporphyrinogen III oxidase AVI_RS12710 PF12627 Probable RNA and SrmB- binding site of polymerase A AVI_RS12710 PF13735 tRNA nucleotidyltransferase domain 2 putative AVI_RS12710 PF01743 Poly A polymerase head domain AVI_RS12715 PF00293 NUDIX domain AVI_RS12725 PF07726 ATPase family associated with various cellular activities (AAA) AVI_RS12725 PF17863 AAA lid domain AVI_RS12750 PF00583 Acetyltransferase (GNAT) family AVI_RS12760 PF00753 Metallo-beta-lactamase superfamily AVI_RS12770 PF13409 Glutathione S-transferase, N-terminal domain AVI_RS12775 PF00293 NUDIX domain AVI_RS12785 PF00574 Clp protease AVI_RS12790 PF03594 Benzoate membrane transport protein AVI_RS12795 PF00682 HMGL-like AVI_RS12795 PF08502 LeuA allosteric (dimerisation) domain AVI_RS12810 PF13404 AsnC-type helix-turn-helix domain AVI_RS12810 PF01037 Lrp/AsnC ligand binding domain AVI_RS12825 PF04717 Type VI secretion system, phage-baseplate injector AVI_RS12845 PF04715 Anthranilate synthase component I, N terminal region AVI_RS12845 PF00117 Glutamine amidotransferase class-I AVI_RS12845 PF00425 chorismate binding enzyme AVI_RS12855 PF01545 Cation efflux family AVI_RS12855 PF16916 Dimerisation domain of Zinc Transporter AVI_RS12860 PF14489 QueF-like protein AVI_RS12875 PF04955 HupE / UreJ protein AVI_RS12880 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AVI_RS12895 PF01268 Formate--tetrahydrofolate ligase AVI_RS12900 PF03472 Autoinducer binding domain AVI_RS12900 PF00196 Bacterial regulatory proteins, luxR family AVI_RS12915 PF00265 Thymidine kinase AVI_RS12925 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS12930 PF00571 CBS domain AVI_RS12930 PF00005 ABC transporter AVI_RS12940 PF01022 Bacterial regulatory protein, arsR family AVI_RS12950 PF00202 Aminotransferase class-III AVI_RS12960 PF13340 Putative transposase of IS4/5 family (DUF4096) AVI_RS12985 PF13458 Periplasmic binding protein AVI_RS13000 PF13382 Adenine deaminase C-terminal domain AVI_RS13000 PF01979 Amidohydrolase family AVI_RS13010 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AVI_RS13015 PF00128 Alpha amylase, catalytic domain AVI_RS13020 PF13439 Glycosyltransferase Family 4 AVI_RS13020 PF00534 Glycosyl transferases group 1 AVI_RS13025 PF01926 50S ribosome-binding GTPase AVI_RS13025 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AVI_RS13045 PF05992 SbmA/BacA-like family AVI_RS13060 PF00557 Metallopeptidase family M24 AVI_RS13065 PF00296 Luciferase-like monooxygenase AVI_RS13070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVI_RS13070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVI_RS13080 PF01799 [2Fe-2S] binding domain AVI_RS13080 PF00111 2Fe-2S iron-sulfur cluster binding domain AVI_RS13085 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVI_RS13085 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVI_RS13095 PF13181 Tetratricopeptide repeat AVI_RS13100 PF03466 LysR substrate binding domain AVI_RS13100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS13110 PF01979 Amidohydrolase family AVI_RS13120 PF00005 ABC transporter AVI_RS13125 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS13130 PF00764 Arginosuccinate synthase AVI_RS13135 PF01037 Lrp/AsnC ligand binding domain AVI_RS13150 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS13150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS13155 PF00486 Transcriptional regulatory protein, C terminal AVI_RS13155 PF00072 Response regulator receiver domain AVI_RS13165 PF00576 HIUase/Transthyretin family AVI_RS13170 PF04115 Ureidoglycolate lyase AVI_RS13175 PF00550 Phosphopantetheine attachment site AVI_RS13175 PF00975 Thioesterase domain AVI_RS13175 PF00501 AMP-binding enzyme AVI_RS13175 PF00668 Condensation domain AVI_RS13175 PF13193 AMP-binding enzyme C-terminal domain AVI_RS13180 PF03951 Glutamine synthetase, beta-Grasp domain AVI_RS13180 PF00120 Glutamine synthetase, catalytic domain AVI_RS13190 PF09349 OHCU decarboxylase AVI_RS13190 PF01014 Uricase AVI_RS13195 PF00107 Zinc-binding dehydrogenase AVI_RS13195 PF08240 Alcohol dehydrogenase GroES-like domain AVI_RS13210 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS13225 PF01266 FAD dependent oxidoreductase AVI_RS13230 PF01266 FAD dependent oxidoreductase AVI_RS13230 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AVI_RS13235 PF00072 Response regulator receiver domain AVI_RS13235 PF01627 Hpt domain AVI_RS13235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS13235 PF00672 HAMP domain AVI_RS13235 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS13235 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVI_RS13245 PF00271 Helicase conserved C-terminal domain AVI_RS13245 PF00270 DEAD/DEAH box helicase AVI_RS13250 PF00732 GMC oxidoreductase AVI_RS13250 PF05199 GMC oxidoreductase AVI_RS13255 PF00596 Class II Aldolase and Adducin N-terminal domain AVI_RS13255 PF00464 Serine hydroxymethyltransferase AVI_RS13260 PF01638 HxlR-like helix-turn-helix AVI_RS13275 PF00817 impB/mucB/samB family AVI_RS13275 PF11799 impB/mucB/samB family C-terminal domain AVI_RS13285 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AVI_RS13285 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AVI_RS13285 PF01276 Orn/Lys/Arg decarboxylase, major domain AVI_RS13360 PF04717 Type VI secretion system, phage-baseplate injector AVI_RS13395 PF01695 IstB-like ATP binding protein AVI_RS13400 PF00665 Integrase core domain AVI_RS13405 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AVI_RS13405 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AVI_RS13420 PF13005 zinc-finger binding domain of transposase IS66 AVI_RS13420 PF13007 Transposase C of IS166 homeodomain AVI_RS13420 PF13817 IS66 C-terminal element AVI_RS13420 PF03050 Transposase IS66 family AVI_RS13425 PF05717 IS66 Orf2 like protein AVI_RS13440 PF02675 S-adenosylmethionine decarboxylase AVI_RS13445 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVI_RS13455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVI_RS13455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVI_RS13460 PF03466 LysR substrate binding domain AVI_RS13460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS13520 PF12802 MarR family AVI_RS13530 PF08240 Alcohol dehydrogenase GroES-like domain AVI_RS13530 PF00107 Zinc-binding dehydrogenase AVI_RS13545 PF14403 Circularly permuted ATP-grasp type 2 AVI_RS13545 PF04168 A predicted alpha-helical domain with a conserved ER motif. AVI_RS13550 PF14403 Circularly permuted ATP-grasp type 2 AVI_RS13565 PF02796 Helix-turn-helix domain of resolvase AVI_RS13565 PF00239 Resolvase, N terminal domain AVI_RS13580 PF01152 Bacterial-like globin AVI_RS13600 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI_RS13600 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AVI_RS13605 PF01180 Dihydroorotate dehydrogenase AVI_RS13610 PF00563 EAL domain AVI_RS13610 PF03707 Bacterial signalling protein N terminal repeat AVI_RS13610 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS13620 PF00440 Bacterial regulatory proteins, tetR family AVI_RS13620 PF08362 YcdC-like protein, C-terminal region AVI_RS13625 PF01546 Peptidase family M20/M25/M40 AVI_RS13625 PF07687 Peptidase dimerisation domain AVI_RS13635 PF01979 Amidohydrolase family AVI_RS13645 PF00005 ABC transporter AVI_RS13650 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS13655 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS13670 PF00873 AcrB/AcrD/AcrF family AVI_RS13680 PF00753 Metallo-beta-lactamase superfamily AVI_RS13685 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVI_RS13690 PF01730 UreF AVI_RS13695 PF05194 UreE urease accessory protein, C-terminal domain AVI_RS13695 PF02814 UreE urease accessory protein, N-terminal domain AVI_RS13700 PF08448 PAS fold AVI_RS13700 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS13700 PF00563 EAL domain AVI_RS13705 PF08534 Redoxin AVI_RS13720 PF01979 Amidohydrolase family AVI_RS13720 PF00449 Urease alpha-subunit, N-terminal domain AVI_RS13730 PF07007 Lysozyme inhibitor LprI AVI_RS13735 PF00699 Urease beta subunit AVI_RS13740 PF06906 Protein of unknown function (DUF1272) AVI_RS13745 PF00547 Urease, gamma subunit AVI_RS13750 PF01774 UreD urease accessory protein AVI_RS13765 PF00005 ABC transporter AVI_RS13770 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVI_RS13770 PF00005 ABC transporter AVI_RS13780 PF02653 Branched-chain amino acid transport system / permease component AVI_RS13790 PF01126 Heme oxygenase AVI_RS13795 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS13795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS13795 PF08446 PAS fold AVI_RS13795 PF01590 GAF domain AVI_RS13795 PF00360 Phytochrome region AVI_RS13805 PF09308 LuxQ, periplasmic AVI_RS13805 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS13805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS13805 PF00072 Response regulator receiver domain AVI_RS13815 PF00072 Response regulator receiver domain AVI_RS13820 PF13419 Haloacid dehalogenase-like hydrolase AVI_RS13835 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AVI_RS13855 PF03776 Septum formation topological specificity factor MinE AVI_RS13860 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVI_RS13865 PF03775 Septum formation inhibitor MinC, C-terminal domain AVI_RS13870 PF13458 Periplasmic binding protein AVI_RS13880 PF00005 ABC transporter AVI_RS13885 PF00005 ABC transporter AVI_RS13885 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVI_RS13890 PF11862 Domain of unknown function (DUF3382) AVI_RS13890 PF02653 Branched-chain amino acid transport system / permease component AVI_RS13895 PF02653 Branched-chain amino acid transport system / permease component AVI_RS13900 PF00440 Bacterial regulatory proteins, tetR family AVI_RS13905 PF07690 Major Facilitator Superfamily AVI_RS13915 PF00009 Elongation factor Tu GTP binding domain AVI_RS13920 PF00459 Inositol monophosphatase family AVI_RS13930 PF02397 Bacterial sugar transferase AVI_RS13945 PF00072 Response regulator receiver domain AVI_RS13945 PF00486 Transcriptional regulatory protein, C terminal AVI_RS13950 PF00072 Response regulator receiver domain AVI_RS13950 PF00196 Bacterial regulatory proteins, luxR family AVI_RS13955 PF10090 Histidine phosphotransferase C-terminal domain AVI_RS13975 PF00588 SpoU rRNA Methylase family AVI_RS13985 PF00849 RNA pseudouridylate synthase AVI_RS13990 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AVI_RS13990 PF01266 FAD dependent oxidoreductase AVI_RS13995 PF04545 Sigma-70, region 4 AVI_RS13995 PF04542 Sigma-70 region 2 AVI_RS13995 PF00140 Sigma-70 factor, region 1.2 AVI_RS14005 PF02040 Arsenical pump membrane protein AVI_RS14020 PF00709 Adenylosuccinate synthetase AVI_RS14035 PF00149 Calcineurin-like phosphoesterase AVI_RS14040 PF02633 Creatinine amidohydrolase AVI_RS14045 PF03466 LysR substrate binding domain AVI_RS14045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS14055 PF00005 ABC transporter AVI_RS14065 PF07969 Amidohydrolase family AVI_RS14070 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AVI_RS14070 PF01565 FAD binding domain AVI_RS14075 PF02525 Flavodoxin-like fold AVI_RS14095 PF00171 Aldehyde dehydrogenase family AVI_RS14100 PF03167 Uracil DNA glycosylase superfamily AVI_RS14105 PF03328 HpcH/HpaI aldolase/citrate lyase family AVI_RS14135 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS14140 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS14145 PF00005 ABC transporter AVI_RS14145 PF08402 TOBE domain AVI_RS14160 PF08125 Mannitol dehydrogenase C-terminal domain AVI_RS14160 PF01232 Mannitol dehydrogenase Rossmann domain AVI_RS14165 PF13419 Haloacid dehalogenase-like hydrolase AVI_RS14170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVI_RS14170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVI_RS14185 PF00593 TonB dependent receptor AVI_RS14185 PF07715 TonB-dependent Receptor Plug Domain AVI_RS14195 PF01032 FecCD transport family AVI_RS14205 PF00005 ABC transporter AVI_RS14215 PF00593 TonB dependent receptor AVI_RS14215 PF07715 TonB-dependent Receptor Plug Domain AVI_RS14235 PF02322 Cytochrome bd terminal oxidase subunit II AVI_RS14240 PF01654 Cytochrome bd terminal oxidase subunit I AVI_RS14245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVI_RS14245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVI_RS14245 PF01842 ACT domain AVI_RS14265 PF13505 Outer membrane protein beta-barrel domain AVI_RS14270 PF00296 Luciferase-like monooxygenase AVI_RS14275 PF02075 Crossover junction endodeoxyribonuclease RuvC AVI_RS14280 PF07499 RuvA, C-terminal domain AVI_RS14280 PF01330 RuvA N terminal domain AVI_RS14285 PF15937 prlF antitoxin for toxin YhaV_toxin AVI_RS14295 PF05496 Holliday junction DNA helicase RuvB P-loop domain AVI_RS14295 PF05491 RuvB C-terminal winged helix domain AVI_RS14295 PF17864 RuvB AAA lid domain AVI_RS14300 PF00149 Calcineurin-like phosphoesterase AVI_RS14300 PF10518 TAT (twin-arginine translocation) pathway signal sequence AVI_RS14305 PF00293 NUDIX domain AVI_RS14310 PF00293 NUDIX domain AVI_RS14320 PF03061 Thioesterase superfamily AVI_RS14325 PF01618 MotA/TolQ/ExbB proton channel family AVI_RS14330 PF02472 Biopolymer transport protein ExbD/TolR AVI_RS14340 PF07676 WD40-like Beta Propeller Repeat AVI_RS14340 PF04052 TolB amino-terminal domain AVI_RS14345 PF00691 OmpA family AVI_RS14355 PF01171 PP-loop family AVI_RS14360 PF01434 Peptidase family M41 AVI_RS14360 PF00004 ATPase family associated with various cellular activities (AAA) AVI_RS14360 PF17862 AAA+ lid domain AVI_RS14360 PF06480 FtsH Extracellular AVI_RS14365 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVI_RS14365 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVI_RS14365 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVI_RS14365 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVI_RS14370 PF01709 Transcriptional regulator AVI_RS14385 PF00999 Sodium/hydrogen exchanger family AVI_RS14385 PF02080 TrkA-C domain AVI_RS14385 PF03471 Transporter associated domain AVI_RS14400 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVI_RS14400 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVI_RS14405 PF02780 Transketolase, C-terminal domain AVI_RS14405 PF00456 Transketolase, thiamine diphosphate binding domain AVI_RS14405 PF02779 Transketolase, pyrimidine binding domain AVI_RS14425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS14425 PF00672 HAMP domain AVI_RS14425 PF02203 Tar ligand binding domain homologue AVI_RS14430 PF01812 5-formyltetrahydrofolate cyclo-ligase family AVI_RS14435 PF13277 YmdB-like protein AVI_RS14440 PF00162 Phosphoglycerate kinase AVI_RS14445 PF00274 Fructose-bisphosphate aldolase class-I AVI_RS14480 PF01197 Ribosomal protein L31 AVI_RS14485 PF00664 ABC transporter transmembrane region AVI_RS14485 PF00005 ABC transporter AVI_RS14490 PF00890 FAD binding domain AVI_RS14495 PF01389 OmpA-like transmembrane domain AVI_RS14495 PF00691 OmpA family AVI_RS14505 PF00459 Inositol monophosphatase family AVI_RS14515 PF02581 Thiamine monophosphate synthase AVI_RS14525 PF01022 Bacterial regulatory protein, arsR family AVI_RS14540 PF00731 AIR carboxylase AVI_RS14545 PF02222 ATP-grasp domain AVI_RS14545 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AVI_RS14550 PF00444 Ribosomal protein L36 AVI_RS14560 PF12697 Alpha/beta hydrolase family AVI_RS14565 PF00224 Pyruvate kinase, barrel domain AVI_RS14565 PF02887 Pyruvate kinase, alpha/beta domain AVI_RS14585 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) AVI_RS14600 PF00158 Sigma-54 interaction domain AVI_RS14600 PF00072 Response regulator receiver domain AVI_RS14600 PF02954 Bacterial regulatory protein, Fis family AVI_RS14610 PF00425 chorismate binding enzyme AVI_RS14610 PF04715 Anthranilate synthase component I, N terminal region AVI_RS14610 PF00117 Glutamine amidotransferase class-I AVI_RS14615 PF01063 Amino-transferase class IV AVI_RS14630 PF16653 Saccharopine dehydrogenase C-terminal domain AVI_RS14630 PF03435 Saccharopine dehydrogenase NADP binding domain AVI_RS14645 PF00149 Calcineurin-like phosphoesterase AVI_RS14645 PF02872 5'-nucleotidase, C-terminal domain AVI_RS14650 PF00762 Ferrochelatase AVI_RS14660 PF00672 HAMP domain AVI_RS14660 PF02203 Tar ligand binding domain homologue AVI_RS14660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS14670 PF04055 Radical SAM superfamily AVI_RS14675 PF01242 6-pyruvoyl tetrahydropterin synthase AVI_RS14680 PF06508 Queuosine biosynthesis protein QueC AVI_RS14685 PF16200 C-terminal region of band_7 AVI_RS14685 PF01145 SPFH domain / Band 7 family AVI_RS14695 PF01380 SIS domain AVI_RS14695 PF00571 CBS domain AVI_RS14705 PF00483 Nucleotidyl transferase AVI_RS14715 PF13406 Transglycosylase SLT domain AVI_RS14725 PF00672 HAMP domain AVI_RS14725 PF02203 Tar ligand binding domain homologue AVI_RS14725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS14730 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI_RS14730 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AVI_RS14735 PF01850 PIN domain AVI_RS14745 PF04898 Glutamate synthase central domain AVI_RS14745 PF00310 Glutamine amidotransferases class-II AVI_RS14745 PF01645 Conserved region in glutamate synthase AVI_RS14745 PF01493 GXGXG motif AVI_RS14755 PF01212 Beta-eliminating lyase AVI_RS14760 PF00011 Hsp20/alpha crystallin family AVI_RS14775 PF00459 Inositol monophosphatase family AVI_RS14785 PF00072 Response regulator receiver domain AVI_RS14795 PF00924 Mechanosensitive ion channel AVI_RS14800 PF01050 Mannose-6-phosphate isomerase AVI_RS14800 PF00483 Nucleotidyl transferase AVI_RS14810 PF04168 A predicted alpha-helical domain with a conserved ER motif. AVI_RS14810 PF14403 Circularly permuted ATP-grasp type 2 AVI_RS14815 PF01841 Transglutaminase-like superfamily AVI_RS14815 PF08379 Bacterial transglutaminase-like N-terminal region AVI_RS14830 PF00343 Carbohydrate phosphorylase AVI_RS14835 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVI_RS14835 PF02806 Alpha amylase, C-terminal all-beta domain AVI_RS14835 PF00128 Alpha amylase, catalytic domain AVI_RS14840 PF00483 Nucleotidyl transferase AVI_RS14845 PF08323 Starch synthase catalytic domain AVI_RS14845 PF00534 Glycosyl transferases group 1 AVI_RS14850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVI_RS14850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVI_RS14850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVI_RS14850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVI_RS14855 PF00128 Alpha amylase, catalytic domain AVI_RS14855 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVI_RS14855 PF18390 Glycogen debranching enzyme C-terminal domain AVI_RS14860 PF01575 MaoC like domain AVI_RS14870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVI_RS14890 PF01165 Ribosomal protein S21 AVI_RS14895 PF01266 FAD dependent oxidoreductase AVI_RS14905 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI_RS14905 PF17806 Sarcosine oxidase A3 domain AVI_RS14905 PF01571 Aminomethyltransferase folate-binding domain AVI_RS14905 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVI_RS14910 PF04268 Sarcosine oxidase, gamma subunit family AVI_RS14920 PF01638 HxlR-like helix-turn-helix AVI_RS14925 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ AVI_RS14930 PF04221 RelB antitoxin AVI_RS14940 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AVI_RS14960 PF03480 Bacterial extracellular solute-binding protein, family 7 AVI_RS14965 PF07722 Peptidase C26 AVI_RS14970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVI_RS14970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVI_RS14975 PF00356 Bacterial regulatory proteins, lacI family AVI_RS14980 PF01047 MarR family AVI_RS14985 PF02633 Creatinine amidohydrolase AVI_RS14990 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVI_RS14990 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVI_RS15000 PF00672 HAMP domain AVI_RS15000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS15000 PF02203 Tar ligand binding domain homologue AVI_RS15005 PF03922 OmpW family AVI_RS15015 PF03150 Di-haem cytochrome c peroxidase AVI_RS15025 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVI_RS15025 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVI_RS15030 PF03466 LysR substrate binding domain AVI_RS15030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS15060 PF01081 KDPG and KHG aldolase AVI_RS15065 PF01928 CYTH domain AVI_RS15075 PF08279 HTH domain AVI_RS15075 PF13280 WYL domain AVI_RS15085 PF17773 UPF0176 acylphosphatase like domain AVI_RS15085 PF00581 Rhodanese-like domain AVI_RS15090 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS15090 PF00563 EAL domain AVI_RS15090 PF13426 PAS domain AVI_RS15100 PF00232 Glycosyl hydrolase family 1 AVI_RS15110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVI_RS15110 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVI_RS15120 PF01261 Xylose isomerase-like TIM barrel AVI_RS15125 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVI_RS15125 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVI_RS15130 PF00356 Bacterial regulatory proteins, lacI family AVI_RS15135 PF07690 Major Facilitator Superfamily AVI_RS15140 PF13533 Biotin-lipoyl like AVI_RS15145 PF17922 Tetracyclin repressor-like, C-terminal domain AVI_RS15145 PF00440 Bacterial regulatory proteins, tetR family AVI_RS15150 PF03471 Transporter associated domain AVI_RS15150 PF03741 Integral membrane protein TerC family AVI_RS15160 PF00633 Helix-hairpin-helix motif AVI_RS15160 PF00730 HhH-GPD superfamily base excision DNA repair protein AVI_RS15160 PF10576 Iron-sulfur binding domain of endonuclease III AVI_RS15170 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVI_RS15170 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVI_RS15185 PF13936 Helix-turn-helix domain AVI_RS15185 PF04198 Putative sugar-binding domain AVI_RS15190 PF00923 Transaldolase/Fructose-6-phosphate aldolase AVI_RS15210 PF01336 OB-fold nucleic acid binding domain AVI_RS15210 PF00152 tRNA synthetases class II (D, K and N) AVI_RS15215 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVI_RS15220 PF02080 TrkA-C domain AVI_RS15220 PF03600 Citrate transporter AVI_RS15235 PF00664 ABC transporter transmembrane region AVI_RS15235 PF03412 Peptidase C39 family AVI_RS15235 PF00005 ABC transporter AVI_RS15270 PF00005 ABC transporter AVI_RS15270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVI_RS15275 PF07687 Peptidase dimerisation domain AVI_RS15275 PF01546 Peptidase family M20/M25/M40 AVI_RS15280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVI_RS15285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVI_RS15290 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS15295 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS15295 PF12911 N-terminal TM domain of oligopeptide transport permease C AVI_RS15305 PF00005 ABC transporter AVI_RS15310 PF13533 Biotin-lipoyl like AVI_RS15315 PF03576 Peptidase family S58 AVI_RS15320 PF07969 Amidohydrolase family AVI_RS15325 PF00005 ABC transporter AVI_RS15325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVI_RS15330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVI_RS15330 PF00005 ABC transporter AVI_RS15335 PF12911 N-terminal TM domain of oligopeptide transport permease C AVI_RS15335 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS15340 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS15345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVI_RS15350 PF01244 Membrane dipeptidase (Peptidase family M19) AVI_RS15355 PF00294 pfkB family carbohydrate kinase AVI_RS15360 PF00392 Bacterial regulatory proteins, gntR family AVI_RS15360 PF07729 FCD domain AVI_RS15365 PF02614 Glucuronate isomerase AVI_RS15370 PF07883 Cupin domain AVI_RS15375 PF04962 KduI/IolB family AVI_RS15385 PF08125 Mannitol dehydrogenase C-terminal domain AVI_RS15385 PF01232 Mannitol dehydrogenase Rossmann domain AVI_RS15390 PF03786 D-mannonate dehydratase (UxuA) AVI_RS15395 PF08666 SAF domain AVI_RS15395 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AVI_RS15400 PF02233 NAD(P) transhydrogenase beta subunit AVI_RS15405 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AVI_RS15405 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AVI_RS15405 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AVI_RS15410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS15410 PF03466 LysR substrate binding domain AVI_RS15415 PF13407 Periplasmic binding protein domain AVI_RS15420 PF00005 ABC transporter AVI_RS15425 PF02653 Branched-chain amino acid transport system / permease component AVI_RS15435 PF00920 Dehydratase family AVI_RS15440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVI_RS15445 PF00171 Aldehyde dehydrogenase family AVI_RS15450 PF05035 2-keto-3-deoxy-galactonokinase AVI_RS15455 PF01081 KDPG and KHG aldolase AVI_RS15460 PF04304 Protein of unknown function (DUF454) AVI_RS15465 PF00892 EamA-like transporter family AVI_RS15470 PF00392 Bacterial regulatory proteins, gntR family AVI_RS15470 PF07729 FCD domain AVI_RS15475 PF07690 Major Facilitator Superfamily AVI_RS15480 PF07703 Alpha-2-macroglobulin bait region domain AVI_RS15480 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AVI_RS15480 PF01835 MG2 domain AVI_RS15480 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AVI_RS15480 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AVI_RS15480 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AVI_RS15480 PF17962 Bacterial macroglobulin domain 6 AVI_RS15480 PF00207 Alpha-2-macroglobulin family AVI_RS15485 PF06832 Penicillin-Binding Protein C-terminus Family AVI_RS15485 PF00912 Transglycosylase AVI_RS15485 PF00905 Penicillin binding protein transpeptidase domain AVI_RS15490 PF00672 HAMP domain AVI_RS15490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS15495 PF16363 GDP-mannose 4,6 dehydratase AVI_RS15505 PF00534 Glycosyl transferases group 1 AVI_RS15505 PF13439 Glycosyltransferase Family 4 AVI_RS15515 PF12911 N-terminal TM domain of oligopeptide transport permease C AVI_RS15515 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS15520 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS15525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVI_RS15530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVI_RS15530 PF00005 ABC transporter AVI_RS15545 PF00534 Glycosyl transferases group 1 AVI_RS15545 PF13439 Glycosyltransferase Family 4 AVI_RS15550 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVI_RS15550 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVI_RS15550 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVI_RS15565 PF00664 ABC transporter transmembrane region AVI_RS15565 PF00005 ABC transporter AVI_RS15570 PF12320 Type 5 capsule protein repressor C-terminal domain AVI_RS15570 PF00149 Calcineurin-like phosphoesterase AVI_RS15575 PF13476 AAA domain AVI_RS15580 PF02203 Tar ligand binding domain homologue AVI_RS15580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS15580 PF00672 HAMP domain AVI_RS15615 PF08460 Bacterial SH3 domain AVI_RS15615 PF01551 Peptidase family M23 AVI_RS15620 PF10431 C-terminal, D2-small domain, of ClpB protein AVI_RS15620 PF07724 AAA domain (Cdc48 subfamily) AVI_RS15620 PF17871 AAA lid domain AVI_RS15620 PF02861 Clp amino terminal domain, pathogenicity island component AVI_RS15620 PF00004 ATPase family associated with various cellular activities (AAA) AVI_RS15630 PF05175 Methyltransferase small domain AVI_RS15630 PF17827 PrmC N-terminal domain AVI_RS15635 PF03462 PCRF domain AVI_RS15635 PF00472 RF-1 domain AVI_RS15640 PF01590 GAF domain AVI_RS15640 PF02896 PEP-utilising enzyme, TIM barrel domain AVI_RS15640 PF05524 PEP-utilising enzyme, N-terminal AVI_RS15640 PF00391 PEP-utilising enzyme, mobile domain AVI_RS15645 PF13840 ACT domain AVI_RS15645 PF01842 ACT domain AVI_RS15645 PF00696 Amino acid kinase family AVI_RS15650 PF03706 Lysylphosphatidylglycerol synthase TM region AVI_RS15650 PF09924 Uncharacterised conserved protein (DUF2156) AVI_RS15665 PF08241 Methyltransferase domain AVI_RS15680 PF00795 Carbon-nitrogen hydrolase AVI_RS15685 PF00462 Glutaredoxin AVI_RS15690 PF00156 Phosphoribosyl transferase domain AVI_RS15695 PF08241 Methyltransferase domain AVI_RS15710 PF00293 NUDIX domain AVI_RS15720 PF01960 ArgJ family AVI_RS15730 PF07517 SecA DEAD-like domain AVI_RS15730 PF01043 SecA preprotein cross-linking domain AVI_RS15730 PF07516 SecA Wing and Scaffold domain AVI_RS15730 PF02810 SEC-C motif AVI_RS15745 PF00501 AMP-binding enzyme AVI_RS15745 PF13193 AMP-binding enzyme C-terminal domain AVI_RS15750 PF00990 Diguanylate cyclase, GGDEF domain AVI_RS15750 PF17151 Periplasmic sensor domain AVI_RS15755 PF13276 HTH-like domain AVI_RS15755 PF13683 Integrase core domain AVI_RS15780 PF00248 Aldo/keto reductase family AVI_RS15785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS15785 PF03466 LysR substrate binding domain AVI_RS15825 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVI_RS15835 PF00106 short chain dehydrogenase AVI_RS15845 PF01923 Cobalamin adenosyltransferase AVI_RS15850 PF01012 Electron transfer flavoprotein domain AVI_RS15855 PF00766 Electron transfer flavoprotein FAD-binding domain AVI_RS15855 PF01012 Electron transfer flavoprotein domain AVI_RS15865 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVI_RS15865 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVI_RS15870 PF08534 Redoxin AVI_RS15875 PF00206 Lyase AVI_RS15875 PF14698 Argininosuccinate lyase C-terminal AVI_RS15885 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVI_RS15885 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVI_RS15895 PF00072 Response regulator receiver domain AVI_RS15900 PF00156 Phosphoribosyl transferase domain AVI_RS15910 PF00005 ABC transporter AVI_RS15930 PF04752 ChaC-like protein AVI_RS15940 PF02153 Prephenate dehydrogenase AVI_RS15945 PF00155 Aminotransferase class I and II AVI_RS15950 PF01209 ubiE/COQ5 methyltransferase family AVI_RS15955 PF00753 Metallo-beta-lactamase superfamily AVI_RS15955 PF16123 Hydroxyacylglutathione hydrolase C-terminus AVI_RS15980 PF00830 Ribosomal L28 family AVI_RS15985 PF02592 Putative vitamin uptake transporter AVI_RS15995 PF06213 Cobalamin biosynthesis protein CobT AVI_RS15995 PF11775 Cobalamin biosynthesis protein CobT VWA domain AVI_RS16000 PF12556 Cobaltochelatase CobS subunit N terminal AVI_RS16000 PF08406 CbbQ/NirQ/NorQ C-terminal AVI_RS16000 PF07728 AAA domain (dynein-related subfamily) AVI_RS16005 PF00226 DnaJ domain AVI_RS16010 PF01722 BolA-like protein AVI_RS16015 PF01761 3-dehydroquinate synthase AVI_RS16020 PF01202 Shikimate kinase AVI_RS16030 PF00589 Phage integrase family AVI_RS16030 PF02899 Phage integrase, N-terminal SAM-like domain AVI_RS16035 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AVI_RS16040 PF03734 L,D-transpeptidase catalytic domain AVI_RS16045 PF01206 Sulfurtransferase TusA AVI_RS16050 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVI_RS16050 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVI_RS16055 PF07943 Penicillin-binding protein 5, C-terminal domain AVI_RS16055 PF00768 D-alanyl-D-alanine carboxypeptidase AVI_RS16060 PF01546 Peptidase family M20/M25/M40 AVI_RS16060 PF07687 Peptidase dimerisation domain AVI_RS16070 PF01594 AI-2E family transporter AVI_RS16080 PF03472 Autoinducer binding domain AVI_RS16080 PF00196 Bacterial regulatory proteins, luxR family AVI_RS16085 PF01514 Secretory protein of YscJ/FliF family AVI_RS16085 PF08345 Flagellar M-ring protein C-terminal AVI_RS16095 PF03975 CheD chemotactic sensory transduction AVI_RS16100 PF00072 Response regulator receiver domain AVI_RS16105 PF00072 Response regulator receiver domain AVI_RS16105 PF01339 CheB methylesterase AVI_RS16110 PF01739 CheR methyltransferase, SAM binding domain AVI_RS16110 PF03705 CheR methyltransferase, all-alpha domain AVI_RS16115 PF01584 CheW-like domain AVI_RS16120 PF01627 Hpt domain AVI_RS16120 PF01584 CheW-like domain AVI_RS16120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS16120 PF02895 Signal transducing histidine kinase, homodimeric domain AVI_RS16125 PF00072 Response regulator receiver domain AVI_RS16135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS16145 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AVI_RS16145 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AVI_RS16145 PF13288 DXP reductoisomerase C-terminal domain AVI_RS16150 PF00144 Beta-lactamase AVI_RS16155 PF00155 Aminotransferase class I and II AVI_RS16165 PF17243 POTRA domain TamA domain 1 AVI_RS16165 PF01103 Surface antigen AVI_RS16165 PF07244 Surface antigen variable number repeat AVI_RS16175 PF08447 PAS fold AVI_RS16175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS16175 PF13426 PAS domain AVI_RS16180 PF01584 CheW-like domain AVI_RS16185 PF07690 Major Facilitator Superfamily AVI_RS16195 PF02634 FdhD/NarQ family AVI_RS16200 PF01568 Molydopterin dinucleotide binding domain AVI_RS16200 PF00384 Molybdopterin oxidoreductase AVI_RS16200 PF12838 4Fe-4S dicluster domain AVI_RS16200 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVI_RS16200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVI_RS16205 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AVI_RS16205 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AVI_RS16205 PF00037 4Fe-4S binding domain AVI_RS16215 PF03466 LysR substrate binding domain AVI_RS16215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI_RS16220 PF01022 Bacterial regulatory protein, arsR family AVI_RS16225 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVI_RS16225 PF00056 lactate/malate dehydrogenase, NAD binding domain AVI_RS16230 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AVI_RS16235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVI_RS16235 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVI_RS16240 PF00231 ATP synthase AVI_RS16245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVI_RS16245 PF00306 ATP synthase alpha/beta chain, C terminal domain AVI_RS16245 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVI_RS16250 PF00213 ATP synthase delta (OSCP) subunit AVI_RS16260 PF00270 DEAD/DEAH box helicase AVI_RS16260 PF17764 3′ DNA-binding domain (3′BD) AVI_RS16260 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AVI_RS16260 PF18074 Primosomal protein N C-terminal domain AVI_RS16265 PF00672 HAMP domain AVI_RS16265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS16270 PF02899 Phage integrase, N-terminal SAM-like domain AVI_RS16270 PF00589 Phage integrase family AVI_RS16280 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI_RS16280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVI_RS16285 PF01810 LysE type translocator AVI_RS16295 PF02817 e3 binding domain AVI_RS16295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVI_RS16295 PF00364 Biotin-requiring enzyme AVI_RS16300 PF00676 Dehydrogenase E1 component AVI_RS16300 PF16078 2-oxoglutarate dehydrogenase N-terminus AVI_RS16300 PF16870 2-oxoglutarate dehydrogenase C-terminal AVI_RS16300 PF02779 Transketolase, pyrimidine binding domain AVI_RS16305 PF00549 CoA-ligase AVI_RS16305 PF02629 CoA binding domain AVI_RS16315 PF00549 CoA-ligase AVI_RS16315 PF08442 ATP-grasp domain AVI_RS16320 PF00056 lactate/malate dehydrogenase, NAD binding domain AVI_RS16320 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVI_RS16325 PF03969 AFG1-like ATPase AVI_RS16330 PF02974 Protease inhibitor Inh AVI_RS16335 PF13085 2Fe-2S iron-sulfur cluster binding domain AVI_RS16335 PF13237 4Fe-4S dicluster domain AVI_RS16340 PF00890 FAD binding domain AVI_RS16340 PF02910 Fumarate reductase flavoprotein C-term AVI_RS16350 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVI_RS16375 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AVI_RS16375 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AVI_RS16380 PF00814 Glycoprotease family AVI_RS16385 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AVI_RS16385 PF03900 Porphobilinogen deaminase, C-terminal domain AVI_RS16410 PF00117 Glutamine amidotransferase class-I AVI_RS16415 PF07690 Major Facilitator Superfamily AVI_RS16420 PF02325 YGGT family AVI_RS16425 PF02594 Uncharacterised ACR, YggU family COG1872 AVI_RS16430 PF00719 Inorganic pyrophosphatase AVI_RS16440 PF00679 Elongation factor G C-terminus AVI_RS16440 PF03144 Elongation factor Tu domain 2 AVI_RS16440 PF00009 Elongation factor Tu GTP binding domain AVI_RS16445 PF09423 PhoD-like phosphatase AVI_RS16445 PF16655 PhoD-like phosphatase, N-terminal domain AVI_RS16450 PF01432 Peptidase family M3 AVI_RS16455 PF07690 Major Facilitator Superfamily AVI_RS16460 PF00764 Arginosuccinate synthase AVI_RS16465 PF00106 short chain dehydrogenase AVI_RS16475 PF01810 LysE type translocator AVI_RS16485 PF04055 Radical SAM superfamily AVI_RS16500 PF01329 Pterin 4 alpha carbinolamine dehydratase AVI_RS16505 PF02834 LigT like Phosphoesterase AVI_RS16510 PF13472 GDSL-like Lipase/Acylhydrolase family AVI_RS16515 PF00005 ABC transporter AVI_RS16525 PF01027 Inhibitor of apoptosis-promoting Bax1 AVI_RS16550 PF00694 Aconitase C-terminal domain AVI_RS16550 PF00330 Aconitase family (aconitate hydratase) AVI_RS16555 PF00005 ABC transporter AVI_RS16560 PF03379 CcmB protein AVI_RS16565 PF01578 Cytochrome C assembly protein AVI_RS16575 PF08534 Redoxin AVI_RS16580 PF10755 Protein of unknown function (DUF2585) AVI_RS16585 PF04279 Intracellular septation protein A AVI_RS16590 PF02881 SRP54-type protein, helical bundle domain AVI_RS16590 PF00448 SRP54-type protein, GTPase domain AVI_RS16595 PF04055 Radical SAM superfamily AVI_RS16595 PF00919 Uncharacterized protein family UPF0004 AVI_RS16600 PF01678 Diaminopimelate epimerase AVI_RS16605 PF12706 Beta-lactamase superfamily domain AVI_RS16615 PF02881 SRP54-type protein, helical bundle domain AVI_RS16615 PF00448 SRP54-type protein, GTPase domain AVI_RS16615 PF02978 Signal peptide binding domain AVI_RS16620 PF02153 Prephenate dehydrogenase AVI_RS16620 PF01817 Chorismate mutase type II AVI_RS16625 PF00886 Ribosomal protein S16 AVI_RS16630 PF05239 PRC-barrel domain AVI_RS16630 PF01782 RimM N-terminal domain AVI_RS16635 PF01746 tRNA (Guanine-1)-methyltransferase AVI_RS16645 PF01245 Ribosomal protein L19 AVI_RS16660 PF04234 CopC domain AVI_RS16665 PF05425 Copper resistance protein D AVI_RS16665 PF13115 YtkA-like AVI_RS16665 PF04234 CopC domain AVI_RS16670 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI_RS16675 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS16700 PF00330 Aconitase family (aconitate hydratase) AVI_RS16705 PF00248 Aldo/keto reductase family AVI_RS16715 PF00072 Response regulator receiver domain AVI_RS16715 PF00486 Transcriptional regulatory protein, C terminal AVI_RS16735 PF03548 Outer membrane lipoprotein carrier protein LolA AVI_RS16740 PF01580 FtsK/SpoIIIE family AVI_RS16740 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AVI_RS16740 PF17854 FtsK alpha domain AVI_RS16740 PF09397 Ftsk gamma domain AVI_RS16745 PF00909 Ammonium Transporter Family AVI_RS16750 PF00543 Nitrogen regulatory protein P-II AVI_RS16760 PF01494 FAD binding domain AVI_RS16765 PF03966 Trm112p-like protein AVI_RS16770 PF05362 Lon protease (S16) C-terminal proteolytic domain AVI_RS16770 PF02190 ATP-dependent protease La (LON) substrate-binding domain AVI_RS16770 PF00004 ATPase family associated with various cellular activities (AAA) AVI_RS16775 PF00085 Thioredoxin AVI_RS16790 PF07690 Major Facilitator Superfamily AVI_RS16795 PF01263 Aldose 1-epimerase AVI_RS16810 PF04204 Homoserine O-succinyltransferase AVI_RS16815 PF17862 AAA+ lid domain AVI_RS16815 PF01434 Peptidase family M41 AVI_RS16815 PF00004 ATPase family associated with various cellular activities (AAA) AVI_RS16825 PF01165 Ribosomal protein S21 AVI_RS16835 PF00005 ABC transporter AVI_RS16835 PF16326 ABC transporter C-terminal domain AVI_RS16855 PF01547 Bacterial extracellular solute-binding protein AVI_RS16860 PF00528 Binding-protein-dependent transport system inner membrane component AVI_RS16865 PF00005 ABC transporter AVI_RS16870 PF01435 Peptidase family M48 AVI_RS16875 PF00140 Sigma-70 factor, region 1.2 AVI_RS16875 PF04542 Sigma-70 region 2 AVI_RS16875 PF04545 Sigma-70, region 4 AVI_RS16885 PF00183 Hsp90 protein AVI_RS16890 PF00210 Ferritin-like domain AVI_RS16900 PF02590 Predicted SPOUT methyltransferase AVI_RS16910 PF01467 Cytidylyltransferase-like AVI_RS16915 PF00171 Aldehyde dehydrogenase family AVI_RS16920 PF00696 Amino acid kinase family AVI_RS16920 PF01472 PUA domain AVI_RS16925 PF01018 GTP1/OBG AVI_RS16925 PF01926 50S ribosome-binding GTPase AVI_RS16945 PF01016 Ribosomal L27 protein AVI_RS16950 PF00829 Ribosomal prokaryotic L21 protein AVI_RS16960 PF05159 Capsule polysaccharide biosynthesis protein AVI_RS16965 PF05159 Capsule polysaccharide biosynthesis protein AVI_RS16970 PF02142 MGS-like domain AVI_RS16970 PF01808 AICARFT/IMPCHase bienzyme AVI_RS16980 PF01029 NusB family AVI_RS16980 PF01189 16S rRNA methyltransferase RsmB/F AVI_RS16985 PF01435 Peptidase family M48 AVI_RS17005 PF13180 PDZ domain AVI_RS17005 PF03572 Peptidase family S41 AVI_RS17015 PF00293 NUDIX domain AVI_RS17020 PF13614 AAA domain AVI_RS17045 PF00072 Response regulator receiver domain AVI_RS17045 PF01339 CheB methylesterase AVI_RS17050 PF03705 CheR methyltransferase, all-alpha domain AVI_RS17050 PF01739 CheR methyltransferase, SAM binding domain AVI_RS17055 PF01584 CheW-like domain AVI_RS17060 PF00672 HAMP domain AVI_RS17060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS17060 PF02203 Tar ligand binding domain homologue AVI_RS17065 PF17202 Single cache domain 3 AVI_RS17065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS17065 PF00672 HAMP domain AVI_RS17070 PF02203 Tar ligand binding domain homologue AVI_RS17070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS17070 PF00672 HAMP domain AVI_RS17075 PF01584 CheW-like domain AVI_RS17080 PF01584 CheW-like domain AVI_RS17080 PF02895 Signal transducing histidine kinase, homodimeric domain AVI_RS17080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS17080 PF01627 Hpt domain AVI_RS17080 PF07194 P2 response regulator binding domain AVI_RS17085 PF00072 Response regulator receiver domain AVI_RS17095 PF00072 Response regulator receiver domain AVI_RS17100 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AVI_RS17100 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI_RS17105 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AVI_RS17105 PF00171 Aldehyde dehydrogenase family AVI_RS17105 PF14850 DNA-binding domain of Proline dehydrogenase AVI_RS17105 PF01619 Proline dehydrogenase AVI_RS17110 PF01037 Lrp/AsnC ligand binding domain AVI_RS17115 PF01205 Uncharacterized protein family UPF0029 AVI_RS17120 PF00106 short chain dehydrogenase AVI_RS17125 PF00155 Aminotransferase class I and II AVI_RS17130 PF00550 Phosphopantetheine attachment site AVI_RS17130 PF08659 KR domain AVI_RS17130 PF02801 Beta-ketoacyl synthase, C-terminal domain AVI_RS17130 PF00109 Beta-ketoacyl synthase, N-terminal domain AVI_RS17130 PF16197 Ketoacyl-synthetase C-terminal extension AVI_RS17130 PF08990 Erythronolide synthase docking AVI_RS17130 PF08240 Alcohol dehydrogenase GroES-like domain AVI_RS17130 PF14765 Polyketide synthase dehydratase AVI_RS17130 PF00698 Acyl transferase domain AVI_RS17140 PF07690 Major Facilitator Superfamily AVI_RS17145 PF04551 GcpE protein AVI_RS17150 PF13488 Glycine zipper AVI_RS17150 PF00691 OmpA family AVI_RS17160 PF00348 Polyprenyl synthetase AVI_RS17165 PF00912 Transglycosylase AVI_RS17175 PF01783 Ribosomal L32p protein family AVI_RS17180 PF07879 PHB/PHA accumulation regulator DNA-binding domain AVI_RS17180 PF05233 PHB accumulation regulatory domain AVI_RS17185 PF02803 Thiolase, C-terminal domain AVI_RS17185 PF00108 Thiolase, N-terminal domain AVI_RS17205 PF01479 S4 domain AVI_RS17210 PF11953 Domain of unknown function (DUF3470) AVI_RS17210 PF00037 4Fe-4S binding domain AVI_RS17230 PF03328 HpcH/HpaI aldolase/citrate lyase family AVI_RS17240 PF00694 Aconitase C-terminal domain AVI_RS17245 PF00180 Isocitrate/isopropylmalate dehydrogenase AVI_RS17250 PF01569 PAP2 superfamily AVI_RS17255 PF00083 Sugar (and other) transporter AVI_RS17255 PF08946 Osmosensory transporter coiled coil AVI_RS17260 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVI_RS17260 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVI_RS17275 PF00484 Carbonic anhydrase AVI_RS17280 PF08543 Phosphomethylpyrimidine kinase AVI_RS17285 PF05088 Bacterial NAD-glutamate dehydrogenase AVI_RS17295 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AVI_RS17295 PF10091 Putative glucoamylase AVI_RS17295 PF06165 Glycosyltransferase family 36 AVI_RS17300 PF07687 Peptidase dimerisation domain AVI_RS17300 PF01546 Peptidase family M20/M25/M40 AVI_RS17305 PF00664 ABC transporter transmembrane region AVI_RS17305 PF00005 ABC transporter AVI_RS17315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVI_RS17315 PF00682 HMGL-like AVI_RS17315 PF02785 Biotin carboxylase C-terminal domain AVI_RS17315 PF00364 Biotin-requiring enzyme AVI_RS17315 PF02436 Conserved carboxylase domain AVI_RS17315 PF00289 Biotin carboxylase, N-terminal domain AVI_RS17325 PF00501 AMP-binding enzyme AVI_RS17325 PF13193 AMP-binding enzyme C-terminal domain AVI_RS17325 PF16177 Acetyl-coenzyme A synthetase N-terminus AVI_RS17335 PF01168 Alanine racemase, N-terminal domain AVI_RS17340 PF08264 Anticodon-binding domain of tRNA AVI_RS17340 PF00133 tRNA synthetases class I (I, L, M and V) AVI_RS17340 PF13603 Leucyl-tRNA synthetase, Domain 2 AVI_RS17355 PF02195 ParB-like nuclease domain AVI_RS17355 PF17762 HTH domain found in ParB protein AVI_RS17360 PF13614 AAA domain AVI_RS17365 PF02527 rRNA small subunit methyltransferase G AVI_RS17370 PF13932 GidA associated domain AVI_RS17370 PF01134 Glucose inhibited division protein A AVI_RS17375 PF01926 50S ribosome-binding GTPase AVI_RS17375 PF12631 MnmE helical domain AVI_RS17375 PF10396 GTP-binding protein TrmE N-terminus AVI_RS17380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVI_RS17380 PF07497 Rho termination factor, RNA-binding domain AVI_RS17380 PF07498 Rho termination factor, N-terminal domain AVI_RS17385 PF03653 Uncharacterised protein family (UPF0093) AVI_RS17390 PF01208 Uroporphyrinogen decarboxylase (URO-D) AVI_RS17815 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AVI_RS17815 PF01266 FAD dependent oxidoreductase AVI_RS18065 PF05977 Transmembrane secretion effector AVI_RS18105 PF00575 S1 RNA binding domain AVI_RS18105 PF03725 3' exoribonuclease family, domain 2 AVI_RS18105 PF01138 3' exoribonuclease family, domain 1 AVI_RS18105 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AVI_RS18105 PF00013 KH domain AVI_RS18260 PF01676 Metalloenzyme superfamily AVI_RS18475 PF01367 5'-3' exonuclease, C-terminal SAM fold AVI_RS18475 PF01612 3'-5' exonuclease AVI_RS18475 PF00476 DNA polymerase family A AVI_RS18475 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVI_RS18485 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVI_RS18485 PF00476 DNA polymerase family A AVI_RS18485 PF01367 5'-3' exonuclease, C-terminal SAM fold AVI_RS18485 PF01612 3'-5' exonuclease AVI_RS18500 PF00012 Hsp70 protein AVI_RS18675 PF13416 Bacterial extracellular solute-binding protein AVI_RS18840 PF01628 HrcA protein C terminal domain AVI_RS18880 PF01170 Putative RNA methylase family UPF0020 AVI_RS18880 PF02926 THUMP domain AVI_RS18880 PF10672 S-adenosylmethionine-dependent methyltransferase AVI_RS18985 PF00795 Carbon-nitrogen hydrolase AVI_RS19180 PF00571 CBS domain AVI_RS19180 PF00005 ABC transporter AVI_RS19330 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVI_RS19330 PF00128 Alpha amylase, catalytic domain AVI_RS19555 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVI_RS19555 PF00378 Enoyl-CoA hydratase/isomerase AVI_RS19555 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVI_RS19610 PF00245 Alkaline phosphatase AVI_RS19690 PF16363 GDP-mannose 4,6 dehydratase AVI_RS20245 PF00463 Isocitrate lyase family AVI_RS20285 PF00989 PAS fold AVI_RS20285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS20285 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS20285 PF13188 PAS domain AVI_RS20365 PF06039 Malate:quinone oxidoreductase (Mqo) AVI_RS21000 PF01523 Putative modulator of DNA gyrase AVI_RS21020 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVI_RS21920 PF00005 ABC transporter AVI_RS21920 PF02687 FtsX-like permease family AVI_RS21920 PF12704 MacB-like periplasmic core domain AVI_RS22180 PF00672 HAMP domain AVI_RS22180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS22180 PF00512 His Kinase A (phospho-acceptor) domain AVI_RS22195 PF03710 Glutamate-ammonia ligase adenylyltransferase AVI_RS22195 PF08335 GlnD PII-uridylyltransferase AVI_RS22270 PF13533 Biotin-lipoyl like AVI_RS22350 PF00571 CBS domain AVI_RS22350 PF01769 Divalent cation transporter AVI_RS22350 PF03448 MgtE intracellular N domain AVI_RS22520 PF14759 Reductase C-terminal AVI_RS22520 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI_RS22570 PF00701 Dihydrodipicolinate synthetase family AVI_RS22950 PF03562 MltA specific insert domain AVI_RS22950 PF06725 3D domain AVI_RS22975 PF01751 Toprim domain AVI_RS22975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS22975 PF00986 DNA gyrase B subunit, carboxyl terminus AVI_RS22975 PF00204 DNA gyrase B AVI_RS23075 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AVI_RS23075 PF05221 S-adenosyl-L-homocysteine hydrolase AVI_RS23080 PF05221 S-adenosyl-L-homocysteine hydrolase AVI_RS23080 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AVI_RS23125 PF00580 UvrD/REP helicase N-terminal domain AVI_RS23125 PF13361 UvrD-like helicase C-terminal domain AVI_RS23125 PF12705 PD-(D/E)XK nuclease superfamily AVI_RS23145 PF01274 Malate synthase AVI_RS23195 PF04408 Helicase associated domain (HA2) AVI_RS23195 PF00270 DEAD/DEAH box helicase AVI_RS23195 PF08482 ATP-dependent helicase C-terminal AVI_RS23195 PF00271 Helicase conserved C-terminal domain AVI_RS23265 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVI_RS23265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVI_RS23390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVI_RS23390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVI_RS23390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVI_RS23390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVI_RS23510 PF00204 DNA gyrase B AVI_RS23510 PF01751 Toprim domain AVI_RS23510 PF00986 DNA gyrase B subunit, carboxyl terminus AVI_RS23510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS23575 PF08245 Mur ligase middle domain AVI_RS23575 PF02875 Mur ligase family, glutamate ligase domain AVI_RS23840 PF00294 pfkB family carbohydrate kinase AVI_RS23955 PF00933 Glycosyl hydrolase family 3 N terminal domain AVI_RS23960 PF00933 Glycosyl hydrolase family 3 N terminal domain AVI_RS24050 PF02073 Thermophilic metalloprotease (M29) AVI_RS24205 PF08364 Bacterial translation initiation factor IF-2 associated region AVI_RS24205 PF11987 Translation-initiation factor 2 AVI_RS24205 PF00009 Elongation factor Tu GTP binding domain AVI_RS24205 PF04760 Translation initiation factor IF-2, N-terminal region AVI_RS24430 PF00664 ABC transporter transmembrane region AVI_RS24430 PF00005 ABC transporter AVI_RS24495 PF00986 DNA gyrase B subunit, carboxyl terminus AVI_RS24495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS24495 PF00204 DNA gyrase B AVI_RS24495 PF01751 Toprim domain AVI_RS24610 PF01293 Phosphoenolpyruvate carboxykinase AVI_RS24725 PF01274 Malate synthase AVI_RS24820 PF00294 pfkB family carbohydrate kinase AVI_RS24920 PF00005 ABC transporter AVI_RS24920 PF17912 MalK OB fold domain AVI_RS24965 PF00800 Prephenate dehydratase AVI_RS24965 PF01817 Chorismate mutase type II AVI_RS25180 PF08529 NusA N-terminal domain AVI_RS25180 PF13184 NusA-like KH domain AVI_RS25180 PF00575 S1 RNA binding domain AVI_RS25405 PF13629 Pilus formation protein N terminal region AVI_RS25405 PF00263 Bacterial type II and III secretion system protein AVI_RS25405 PF04972 BON domain AVI_RS25665 PF01612 3'-5' exonuclease AVI_RS25665 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVI_RS25665 PF01367 5'-3' exonuclease, C-terminal SAM fold AVI_RS25665 PF00476 DNA polymerase family A AVI_RS25955 PF00072 Response regulator receiver domain AVI_RS26705 PF00664 ABC transporter transmembrane region AVI_RS26705 PF00005 ABC transporter AVI_RS27030 PF02768 DNA polymerase III beta subunit, C-terminal domain AVI_RS27030 PF02767 DNA polymerase III beta subunit, central domain AVI_RS27030 PF00712 DNA polymerase III beta subunit, N-terminal domain AVI_RS27285 PF01842 ACT domain AVI_RS27285 PF08335 GlnD PII-uridylyltransferase AVI_RS27285 PF01966 HD domain AVI_RS28310 PF13005 zinc-finger binding domain of transposase IS66 AVI_RS28310 PF13007 Transposase C of IS166 homeodomain AVI_RS28310 PF13817 IS66 C-terminal element AVI_RS28310 PF03050 Transposase IS66 family AVI_RS28375 PF01850 PIN domain AVI_RS28455 PF00593 TonB dependent receptor AVI_RS28455 PF07715 TonB-dependent Receptor Plug Domain AVI_RS28470 PF01706 FliG C-terminal domain AVI_RS28470 PF14841 FliG middle domain AVI_RS28470 PF14842 FliG N-terminal domain AVI_RS28540 PF01751 Toprim domain AVI_RS28540 PF00204 DNA gyrase B AVI_RS28540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI_RS28540 PF00986 DNA gyrase B subunit, carboxyl terminus AVI_RS28750 PF01274 Malate synthase AVI_RS28915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVI_RS28915 PF00205 Thiamine pyrophosphate enzyme, central domain AVI_RS28915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVI_RS28970 PF18254 HMW1 domain 2 AVI_RS28970 PF18071 HMW1C N-terminal AVI_RS28990 PF00534 Glycosyl transferases group 1 AVI_RS28990 PF00535 Glycosyl transferase family 2 AVI_RS28995 PF00082 Subtilase family AVI_RS29045 PF09669 Phage regulatory protein Rha (Phage_pRha) AVI_RS29045 PF10549 ORF11CD3 domain AVI_RS29075 PF02570 Precorrin-8X methylmutase AVI_RS29080 PF02416 mttA/Hcf106 family AVI_RS29100 PF00196 Bacterial regulatory proteins, luxR family AVI_RS29100 PF03472 Autoinducer binding domain AVI_RS29105 PF00565 Staphylococcal nuclease homologue AVI_RS29205 PF00672 HAMP domain AVI_RS29205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI_RS29320 PF12804 MobA-like NTP transferase domain AVI_RS29345 PF08468 Methyltransferase small domain N-terminal AVI_RS29345 PF05175 Methyltransferase small domain