AVI_RS00040 SM00479 AVI_RS00040 AVI_RS00055 SM00978 AVI_RS00055 AVI_RS00060 SM00925 MltA specific insert domain AVI_RS00065 SM00463 Small MutS-related domain AVI_RS00070 SM00530 Helix-turn-helix XRE-family like proteins AVI_RS00075 SM00387 Histidine kinase-like ATPases AVI_RS00075 SM00433 TopoisomeraseII AVI_RS00145 SM00382 ATPases associated with a variety of cellular activities AVI_RS00145 SM01086 C-terminal, D2-small domain, of ClpB protein AVI_RS00200 SM00448 cheY-homologous receiver domain AVI_RS00200 SM00862 Transcriptional regulatory protein, C terminal AVI_RS00205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS00205 SM00387 Histidine kinase-like ATPases AVI_RS00205 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS00225 SM00996 S-adenosyl-L-homocysteine hydrolase AVI_RS00225 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AVI_RS00230 SM00091 PAS domain AVI_RS00230 SM00387 Histidine kinase-like ATPases AVI_RS00230 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS00270 SM00448 cheY-homologous receiver domain AVI_RS00275 SM00387 Histidine kinase-like ATPases AVI_RS00275 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS00280 SM00487 DEAD-like helicases superfamily AVI_RS00280 SM00490 helicase superfamily c-terminal domain AVI_RS00280 SM00847 Helicase associated domain (HA2) Add an annotation AVI_RS00330 SM01130 AVI_RS00330 AVI_RS00335 SM00354 helix_turn _helix lactose operon repressor AVI_RS00440 SM00420 helix_turn_helix, Deoxyribose operon repressor AVI_RS00440 SM01134 AVI_RS00440 AVI_RS00450 SM00382 ATPases associated with a variety of cellular activities AVI_RS00455 SM00382 ATPases associated with a variety of cellular activities AVI_RS00510 SM00382 ATPases associated with a variety of cellular activities AVI_RS00535 SM00530 Helix-turn-helix XRE-family like proteins AVI_RS00540 SM00864 Tubulin/FtsZ family, GTPase domain AVI_RS00540 SM00865 Tubulin/FtsZ family, C-terminal domain AVI_RS00550 SM00474 3'-5' exonuclease AVI_RS00620 SM00357 Cold shock protein domain AVI_RS00680 SM00493 AVI_RS00680 AVI_RS00720 SM00316 Ribosomal protein S1-like RNA-binding domain AVI_RS00720 SM00322 K homology RNA-binding domain AVI_RS00745 SM01387 AVI_RS00745 AVI_RS00755 SM00316 Ribosomal protein S1-like RNA-binding domain AVI_RS00755 SM00322 K homology RNA-binding domain AVI_RS00770 SM00825 Beta-ketoacyl synthase AVI_RS00815 SM00316 Ribosomal protein S1-like RNA-binding domain AVI_RS00845 SM00448 cheY-homologous receiver domain AVI_RS00845 SM00862 Transcriptional regulatory protein, C terminal AVI_RS00850 SM00387 Histidine kinase-like ATPases AVI_RS00875 SM00873 B3/4 domain AVI_RS00875 SM00874 tRNA synthetase B5 domain AVI_RS00875 SM00896 Ferredoxin-fold anticodon binding domain AVI_RS00925 SM00858 AVI_RS00925 AVI_RS00985 SM00855 Phosphoglycerate mutase family AVI_RS00995 SM00382 ATPases associated with a variety of cellular activities AVI_RS01005 SM00851 MGS-like domain AVI_RS01030 SM00382 ATPases associated with a variety of cellular activities AVI_RS01075 SM00382 ATPases associated with a variety of cellular activities AVI_RS01100 SM01133 AVI_RS01100 AVI_RS01105 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AVI_RS01110 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVI_RS01110 SM00866 AVI_RS01110 AVI_RS01135 SM00382 ATPases associated with a variety of cellular activities AVI_RS01140 SM00382 ATPases associated with a variety of cellular activities AVI_RS01150 SM00382 ATPases associated with a variety of cellular activities AVI_RS01180 SM00072 Guanylate kinase homologues. AVI_RS01190 SM00028 Tetratricopeptide repeats AVI_RS01205 SM00867 YceI-like domain AVI_RS01210 SM00867 YceI-like domain AVI_RS01215 SM00347 helix_turn_helix multiple antibiotic resistance protein AVI_RS01225 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AVI_RS01225 SM00474 3'-5' exonuclease AVI_RS01225 SM00475 5'-3' exonuclease AVI_RS01225 SM00479 AVI_RS01225 AVI_RS01225 SM00482 DNA polymerase A domain AVI_RS01230 SM00347 helix_turn_helix multiple antibiotic resistance protein AVI_RS01265 SM00271 DnaJ molecular chaperone homology domain AVI_RS01275 SM00382 ATPases associated with a variety of cellular activities AVI_RS01295 SM00287 Bacterial SH3 domain homologues AVI_RS01305 SM00052 Putative diguanylate phosphodiesterase AVI_RS01305 SM00267 diguanylate cyclase AVI_RS01425 SM00710 Parallel beta-helix repeats AVI_RS01430 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AVI_RS01445 SM00480 DNA polymerase III beta subunit AVI_RS01475 SM00382 ATPases associated with a variety of cellular activities AVI_RS01490 SM00382 ATPases associated with a variety of cellular activities AVI_RS01580 SM00387 Histidine kinase-like ATPases AVI_RS01580 SM00448 cheY-homologous receiver domain AVI_RS01585 SM00448 cheY-homologous receiver domain AVI_RS01590 SM00387 Histidine kinase-like ATPases AVI_RS01605 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AVI_RS01605 SM01232 AVI_RS01605 AVI_RS01615 SM00382 ATPases associated with a variety of cellular activities AVI_RS01615 SM00760 Bacterial dnaA protein helix-turn-helix domain AVI_RS01630 SM00729 Elongator protein 3, MiaB family, Radical SAM AVI_RS01675 SM00382 ATPases associated with a variety of cellular activities AVI_RS01690 SM00411 bacterial (prokaryotic) histone like domain AVI_RS01705 SM00967 RNA 2'-O ribose methyltransferase substrate binding AVI_RS01715 SM00387 Histidine kinase-like ATPases AVI_RS01715 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS01715 SM00448 cheY-homologous receiver domain AVI_RS01730 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AVI_RS01730 SM00534 ATPase domain of DNA mismatch repair MUTS family AVI_RS01735 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AVI_RS01760 SM00932 Scaffold protein Nfu/NifU N terminal AVI_RS01780 SM00563 Phosphate acyltransferases AVI_RS01785 SM00729 Elongator protein 3, MiaB family, Radical SAM AVI_RS01800 SM01091 Transporter associated domain AVI_RS01815 SM00530 Helix-turn-helix XRE-family like proteins AVI_RS01850 SM00054 EF-hand, calcium binding motif AVI_RS01855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS01855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS01865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS01865 SM00387 Histidine kinase-like ATPases AVI_RS01885 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AVI_RS01970 SM00448 cheY-homologous receiver domain AVI_RS01970 SM00862 Transcriptional regulatory protein, C terminal AVI_RS01980 SM00382 ATPases associated with a variety of cellular activities AVI_RS02000 SM00387 Histidine kinase-like ATPases AVI_RS02000 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS02025 SM00382 ATPases associated with a variety of cellular activities AVI_RS02045 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVI_RS02045 SM00866 AVI_RS02045 AVI_RS02110 SM00419 helix_turn_helix, cAMP Regulatory protein AVI_RS02115 SM00448 cheY-homologous receiver domain AVI_RS02125 SM00387 Histidine kinase-like ATPases AVI_RS02125 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS02125 SM00448 cheY-homologous receiver domain AVI_RS02130 SM00448 cheY-homologous receiver domain AVI_RS02130 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AVI_RS02140 SM00267 diguanylate cyclase AVI_RS02175 SM00642 Alpha-amylase domain AVI_RS02230 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AVI_RS02310 SM00382 ATPases associated with a variety of cellular activities AVI_RS02345 SM00062 Bacterial periplasmic substrate-binding proteins AVI_RS02360 SM00421 helix_turn_helix, Lux Regulon AVI_RS02360 SM00448 cheY-homologous receiver domain AVI_RS02390 SM00028 Tetratricopeptide repeats AVI_RS02425 SM00671 Sel1-like repeats. AVI_RS02440 SM00098 Alkaline phosphatase homologues AVI_RS02450 SM00382 ATPases associated with a variety of cellular activities AVI_RS02465 SM00091 PAS domain AVI_RS02465 SM00267 diguanylate cyclase AVI_RS02475 SM00062 Bacterial periplasmic substrate-binding proteins AVI_RS02480 SM00487 DEAD-like helicases superfamily AVI_RS02480 SM00490 helicase superfamily c-terminal domain AVI_RS02490 SM00220 Serine/Threonine protein kinases, catalytic domain AVI_RS02505 SM00387 Histidine kinase-like ATPases AVI_RS02505 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS02505 SM00448 cheY-homologous receiver domain AVI_RS02580 SM00226 Low molecular weight phosphatase family AVI_RS02680 SM00849 Metallo-beta-lactamase superfamily AVI_RS02760 SM00382 ATPases associated with a variety of cellular activities AVI_RS02890 SM00382 ATPases associated with a variety of cellular activities AVI_RS02910 SM00382 ATPases associated with a variety of cellular activities AVI_RS02965 SM00382 ATPases associated with a variety of cellular activities AVI_RS03080 SM00862 Transcriptional regulatory protein, C terminal AVI_RS03160 SM00354 helix_turn _helix lactose operon repressor AVI_RS03180 SM00642 Alpha-amylase domain AVI_RS03185 SM00382 ATPases associated with a variety of cellular activities AVI_RS03205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS03205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS03205 SM01358 AVI_RS03205 AVI_RS03230 SM01230 AVI_RS03230 AVI_RS03245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS03245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS03255 SM00382 ATPases associated with a variety of cellular activities AVI_RS03275 SM00530 Helix-turn-helix XRE-family like proteins AVI_RS03285 SM00382 ATPases associated with a variety of cellular activities AVI_RS03305 SM00091 PAS domain AVI_RS03305 SM00387 Histidine kinase-like ATPases AVI_RS03305 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS03385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS03385 SM00387 Histidine kinase-like ATPases AVI_RS03385 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS03390 SM00448 cheY-homologous receiver domain AVI_RS03390 SM00862 Transcriptional regulatory protein, C terminal AVI_RS03515 SM00746 metallochaperone-like domain AVI_RS03585 SM00052 Putative diguanylate phosphodiesterase AVI_RS03585 SM00267 diguanylate cyclase AVI_RS03590 SM00091 PAS domain AVI_RS03590 SM00448 cheY-homologous receiver domain AVI_RS03595 SM00853 MutL C terminal dimerisation domain AVI_RS03595 SM01340 AVI_RS03595 AVI_RS03650 SM00363 S4 RNA-binding domain AVI_RS03660 SM00849 Metallo-beta-lactamase superfamily AVI_RS03680 SM00421 helix_turn_helix, Lux Regulon AVI_RS03740 SM00729 Elongator protein 3, MiaB family, Radical SAM AVI_RS03750 SM00852 Probable molybdopterin binding domain AVI_RS03760 SM00028 Tetratricopeptide repeats AVI_RS03790 SM00911 HWE histidine kinase AVI_RS03820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS03820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS03820 SM01049 AVI_RS03820 AVI_RS03830 SM01209 AVI_RS03830 AVI_RS03830 SM01210 AVI_RS03830 AVI_RS03840 SM00316 Ribosomal protein S1-like RNA-binding domain AVI_RS03840 SM00732 Likely ribonuclease with RNase H fold. AVI_RS03885 SM00382 ATPases associated with a variety of cellular activities AVI_RS03905 SM00267 diguanylate cyclase AVI_RS03910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS03910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS03950 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS03950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS03965 SM00363 S4 RNA-binding domain AVI_RS03975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS03975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS03980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS03980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS03985 SM00861 Transketolase, pyrimidine binding domain AVI_RS04020 SM00382 ATPases associated with a variety of cellular activities AVI_RS04060 SM00052 Putative diguanylate phosphodiesterase AVI_RS04060 SM00091 PAS domain AVI_RS04060 SM00267 diguanylate cyclase AVI_RS04070 SM00855 Phosphoglycerate mutase family AVI_RS04080 SM00271 DnaJ molecular chaperone homology domain AVI_RS04105 SM00422 helix_turn_helix, mercury resistance AVI_RS04230 SM00886 Stress responsive A/B Barrel Domain AVI_RS04245 SM00382 ATPases associated with a variety of cellular activities AVI_RS04270 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AVI_RS04275 SM00052 Putative diguanylate phosphodiesterase AVI_RS04275 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AVI_RS04275 SM00267 diguanylate cyclase AVI_RS04300 SM00046 Diacylglycerol kinase catalytic domain (presumed) AVI_RS04310 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVI_RS04310 SM00895 AVI_RS04310 AVI_RS04350 SM00478 endonuclease III AVI_RS04350 SM00525 AVI_RS04350 AVI_RS04385 SM00287 Bacterial SH3 domain homologues AVI_RS04435 SM00382 ATPases associated with a variety of cellular activities AVI_RS04450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS04450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS04475 SM00354 helix_turn _helix lactose operon repressor AVI_RS04485 SM00849 Metallo-beta-lactamase superfamily AVI_RS04575 SM00052 Putative diguanylate phosphodiesterase AVI_RS04575 SM00267 diguanylate cyclase AVI_RS04585 SM00829 Enoylreductase AVI_RS04600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS04600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS04625 SM00420 helix_turn_helix, Deoxyribose operon repressor AVI_RS04625 SM01134 AVI_RS04625 AVI_RS04670 SM00347 helix_turn_helix multiple antibiotic resistance protein AVI_RS04720 SM00347 helix_turn_helix multiple antibiotic resistance protein AVI_RS04735 SM00387 Histidine kinase-like ATPases AVI_RS04740 SM00448 cheY-homologous receiver domain AVI_RS04755 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS04755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS04760 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS04760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS04790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS04790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS04800 SM00382 ATPases associated with a variety of cellular activities AVI_RS04835 SM00382 ATPases associated with a variety of cellular activities AVI_RS04960 SM00267 diguanylate cyclase AVI_RS05040 SM00100 Cyclic nucleotide-monophosphate binding domain AVI_RS05040 SM00419 helix_turn_helix, cAMP Regulatory protein AVI_RS05055 SM00342 helix_turn_helix, arabinose operon control protein AVI_RS05130 SM00382 ATPases associated with a variety of cellular activities AVI_RS05135 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AVI_RS05160 SM00387 Histidine kinase-like ATPases AVI_RS05160 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS05215 SM00421 helix_turn_helix, Lux Regulon AVI_RS05250 SM00422 helix_turn_helix, mercury resistance AVI_RS05360 SM00448 cheY-homologous receiver domain AVI_RS05360 SM00862 Transcriptional regulatory protein, C terminal AVI_RS05365 SM00387 Histidine kinase-like ATPases AVI_RS05375 SM00028 Tetratricopeptide repeats AVI_RS05395 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AVI_RS05400 SM00448 cheY-homologous receiver domain AVI_RS05400 SM00862 Transcriptional regulatory protein, C terminal AVI_RS05405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS05405 SM00387 Histidine kinase-like ATPases AVI_RS05405 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS05415 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AVI_RS05415 SM00387 Histidine kinase-like ATPases AVI_RS05415 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS05445 SM00986 Uracil DNA glycosylase superfamily AVI_RS05445 SM00987 UreE urease accessory protein, C-terminal domain AVI_RS05500 SM00116 Domain in cystathionine beta-synthase and other proteins. AVI_RS05500 SM00924 MgtE intracellular N domain AVI_RS05515 SM00382 ATPases associated with a variety of cellular activities AVI_RS05535 SM01230 AVI_RS05535 AVI_RS05640 SM01130 AVI_RS05640 AVI_RS05655 SM00342 helix_turn_helix, arabinose operon control protein AVI_RS05660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS05670 SM01409 AVI_RS05670 AVI_RS05675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AVI_RS05675 SM00954 Region found in RelA / SpoT proteins AVI_RS05685 SM00358 Double-stranded RNA binding motif AVI_RS05685 SM00535 Ribonuclease III family AVI_RS05715 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AVI_RS05775 SM00382 ATPases associated with a variety of cellular activities AVI_RS05780 SM00257 Lysin motif AVI_RS05800 SM00917 LeuA allosteric (dimerisation) domain AVI_RS05825 SM00670 Large family of predicted nucleotide-binding domains AVI_RS05830 SM00966 SpoVT / AbrB like domain AVI_RS05840 SM00840 AVI_RS05840 AVI_RS05895 SM00984 UDP binding domain AVI_RS05910 SM00382 ATPases associated with a variety of cellular activities AVI_RS05915 SM01005 Alanine racemase, C-terminal domain AVI_RS05920 SM00342 helix_turn_helix, arabinose operon control protein AVI_RS05935 SM00062 Bacterial periplasmic substrate-binding proteins AVI_RS05940 SM00382 ATPases associated with a variety of cellular activities AVI_RS05985 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AVI_RS05990 SM00822 AVI_RS05990 AVI_RS05995 SM00823 Phosphopantetheine attachment site AVI_RS06000 SM00825 Beta-ketoacyl synthase AVI_RS06015 SM00072 Guanylate kinase homologues. AVI_RS06025 SM00650 Ribosomal RNA adenine dimethylases AVI_RS06070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS06070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS06075 SM00382 ATPases associated with a variety of cellular activities AVI_RS06085 SM00562 AVI_RS06085 AVI_RS06105 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AVI_RS06105 SM00465 GIY-YIG type nucleases (URI domain) AVI_RS06130 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AVI_RS06140 SM00849 Metallo-beta-lactamase superfamily AVI_RS06145 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AVI_RS06195 SM00347 helix_turn_helix multiple antibiotic resistance protein AVI_RS06195 SM00529 Helix-turn-helix diphteria tox regulatory element AVI_RS06220 SM00474 3'-5' exonuclease AVI_RS06250 SM00434 DNA Topoisomerase IV AVI_RS06255 SM00052 Putative diguanylate phosphodiesterase AVI_RS06255 SM00267 diguanylate cyclase AVI_RS06265 SM00052 Putative diguanylate phosphodiesterase AVI_RS06265 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AVI_RS06265 SM00267 diguanylate cyclase AVI_RS06280 SM01004 Delta-aminolevulinic acid dehydratase AVI_RS06290 SM00347 helix_turn_helix multiple antibiotic resistance protein AVI_RS06370 SM00411 bacterial (prokaryotic) histone like domain AVI_RS06375 SM00422 helix_turn_helix, mercury resistance AVI_RS06390 SM00091 PAS domain AVI_RS06390 SM00387 Histidine kinase-like ATPases AVI_RS06400 SM00382 ATPases associated with a variety of cellular activities AVI_RS06415 SM00382 ATPases associated with a variety of cellular activities AVI_RS06425 SM00342 helix_turn_helix, arabinose operon control protein AVI_RS06460 SM00849 Metallo-beta-lactamase superfamily AVI_RS06465 SM00342 helix_turn_helix, arabinose operon control protein AVI_RS06540 SM00859 Semialdehyde dehydrogenase, NAD binding domain AVI_RS06575 SM00881 CoA binding domain AVI_RS06585 SM00881 CoA binding domain AVI_RS06610 SM00267 diguanylate cyclase AVI_RS06620 SM00382 ATPases associated with a variety of cellular activities AVI_RS06620 SM00994 ClpX C4-type zinc finger AVI_RS06620 SM01086 C-terminal, D2-small domain, of ClpB protein AVI_RS06625 SM00382 ATPases associated with a variety of cellular activities AVI_RS06625 SM00464 Found in ATP-dependent protease La (LON) AVI_RS06630 SM00411 bacterial (prokaryotic) histone like domain AVI_RS06640 SM00347 helix_turn_helix multiple antibiotic resistance protein AVI_RS06715 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AVI_RS06725 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVI_RS06770 SM00849 Metallo-beta-lactamase superfamily AVI_RS06805 SM00382 ATPases associated with a variety of cellular activities AVI_RS06810 SM00481 DNA polymerase alpha chain like domain AVI_RS06835 SM00448 cheY-homologous receiver domain AVI_RS06840 SM00267 diguanylate cyclase AVI_RS06840 SM00448 cheY-homologous receiver domain AVI_RS06860 SM00316 Ribosomal protein S1-like RNA-binding domain AVI_RS06860 SM00955 AVI_RS06860 AVI_RS06865 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AVI_RS06865 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AVI_RS06865 SM00493 AVI_RS06865 AVI_RS06880 SM01207 AVI_RS06880 AVI_RS06915 SM00732 Likely ribonuclease with RNase H fold. AVI_RS06920 SM00849 Metallo-beta-lactamase superfamily AVI_RS06950 SM01259 AVI_RS06950 AVI_RS06965 SM00845 GatB domain AVI_RS06995 SM00878 Biotin carboxylase C-terminal domain AVI_RS07030 SM00646 AVI_RS07030 AVI_RS07040 SM00937 AVI_RS07040 AVI_RS07045 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AVI_RS07070 SM00967 RNA 2'-O ribose methyltransferase substrate binding AVI_RS07115 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AVI_RS07115 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AVI_RS07120 SM00649 Ribosomal protein L11/L12 AVI_RS07145 SM00663 RNA polymerase I subunit A N-terminus AVI_RS07170 SM00838 Elongation factor G C-terminus AVI_RS07170 SM00889 Elongation factor G, domain IV AVI_RS07180 SM01403 AVI_RS07180 AVI_RS07200 SM01382 AVI_RS07200 AVI_RS07200 SM01383 AVI_RS07200 AVI_RS07215 SM00322 K homology RNA-binding domain AVI_RS07235 SM01374 AVI_RS07235 AVI_RS07240 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AVI_RS07305 SM00662 RNA polymerases D AVI_RS07330 SM00450 Rhodanese Homology Domain AVI_RS07335 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AVI_RS07385 SM00421 helix_turn_helix, Lux Regulon AVI_RS07390 SM00919 Malic enzyme, NAD binding domain AVI_RS07390 SM01274 AVI_RS07390 AVI_RS07405 SM00382 ATPases associated with a variety of cellular activities AVI_RS07420 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVI_RS07440 SM01211 AVI_RS07440 AVI_RS07465 SM00267 diguanylate cyclase AVI_RS07475 SM01329 AVI_RS07475 AVI_RS07495 SM00116 Domain in cystathionine beta-synthase and other proteins. AVI_RS07495 SM01091 Transporter associated domain AVI_RS07500 SM00382 ATPases associated with a variety of cellular activities AVI_RS07515 SM00947 Carbonic anhydrase AVI_RS07530 SM00363 S4 RNA-binding domain AVI_RS07530 SM01390 AVI_RS07530 AVI_RS07585 SM00271 DnaJ molecular chaperone homology domain AVI_RS07590 SM00530 Helix-turn-helix XRE-family like proteins AVI_RS07815 SM00530 Helix-turn-helix XRE-family like proteins AVI_RS07870 SM01126 AVI_RS07870 AVI_RS07930 SM00100 Cyclic nucleotide-monophosphate binding domain AVI_RS07930 SM00419 helix_turn_helix, cAMP Regulatory protein AVI_RS07935 SM00729 Elongator protein 3, MiaB family, Radical SAM AVI_RS07955 SM00825 Beta-ketoacyl synthase AVI_RS07960 SM00829 Enoylreductase AVI_RS08025 SM00387 Histidine kinase-like ATPases AVI_RS08025 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS08035 SM00986 Uracil DNA glycosylase superfamily AVI_RS08035 SM00987 UreE urease accessory protein, C-terminal domain AVI_RS08040 SM00344 helix_turn_helix ASNC type AVI_RS08055 SM00028 Tetratricopeptide repeats AVI_RS08075 SM00062 Bacterial periplasmic substrate-binding proteins AVI_RS08075 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AVI_RS08100 SM00729 Elongator protein 3, MiaB family, Radical SAM AVI_RS08110 SM00267 diguanylate cyclase AVI_RS08185 SM00052 Putative diguanylate phosphodiesterase AVI_RS08185 SM00267 diguanylate cyclase AVI_RS08190 SM00487 DEAD-like helicases superfamily AVI_RS08190 SM00490 helicase superfamily c-terminal domain AVI_RS08225 SM01192 AVI_RS08225 AVI_RS08225 SM01193 AVI_RS08225 AVI_RS08240 SM00861 Transketolase, pyrimidine binding domain AVI_RS08275 SM00729 Elongator protein 3, MiaB family, Radical SAM AVI_RS08320 SM00387 Histidine kinase-like ATPases AVI_RS08320 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS08325 SM00382 ATPases associated with a variety of cellular activities AVI_RS08325 SM00448 cheY-homologous receiver domain AVI_RS08330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS08330 SM00387 Histidine kinase-like ATPases AVI_RS08330 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS08335 SM00382 ATPases associated with a variety of cellular activities AVI_RS08335 SM00448 cheY-homologous receiver domain AVI_RS08405 SM00936 Penicillin-binding protein 5, C-terminal domain AVI_RS08435 SM00849 Metallo-beta-lactamase superfamily AVI_RS08465 SM00382 ATPases associated with a variety of cellular activities AVI_RS08520 SM00382 ATPases associated with a variety of cellular activities AVI_RS08535 SM00833 Cobalamin synthesis protein cobW C-terminal domain AVI_RS08545 SM00382 ATPases associated with a variety of cellular activities AVI_RS08595 SM00014 Acid phosphatase homologues AVI_RS08605 SM00116 Domain in cystathionine beta-synthase and other proteins. AVI_RS08630 SM01234 AVI_RS08630 AVI_RS08635 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AVI_RS08675 SM00903 Flavin reductase like domain AVI_RS08700 SM00387 Histidine kinase-like ATPases AVI_RS08700 SM00433 TopoisomeraseII AVI_RS08710 SM00267 diguanylate cyclase AVI_RS08765 SM00905 Dihydroneopterin aldolase AVI_RS08930 SM00357 Cold shock protein domain AVI_RS08975 SM00481 DNA polymerase alpha chain like domain AVI_RS09260 SM00487 DEAD-like helicases superfamily AVI_RS09260 SM00490 helicase superfamily c-terminal domain AVI_RS09270 SM00487 DEAD-like helicases superfamily AVI_RS09270 SM00490 helicase superfamily c-terminal domain AVI_RS09270 SM00982 AVI_RS09270 AVI_RS09270 SM01058 CarD-like/TRCF domain AVI_RS09300 SM00992 Hemimethylated DNA-binding protein YccV like AVI_RS09305 SM01230 AVI_RS09305 AVI_RS09310 SM00938 Nitrogen regulatory protein P-II AVI_RS09350 SM00434 DNA Topoisomerase IV AVI_RS09380 SM01350 AVI_RS09380 AVI_RS09385 SM00849 Metallo-beta-lactamase superfamily AVI_RS09390 SM00354 helix_turn _helix lactose operon repressor AVI_RS09410 SM00382 ATPases associated with a variety of cellular activities AVI_RS09480 SM00998 Adenylosuccinate lyase C-terminus AVI_RS09505 SM00903 Flavin reductase like domain AVI_RS09530 SM00487 DEAD-like helicases superfamily AVI_RS09530 SM00490 helicase superfamily c-terminal domain AVI_RS09560 SM00382 ATPases associated with a variety of cellular activities AVI_RS09635 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVI_RS09640 SM01092 CO dehydrogenase flavoprotein C-terminal domain AVI_RS09660 SM00091 PAS domain AVI_RS09660 SM00387 Histidine kinase-like ATPases AVI_RS09660 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS09660 SM00448 cheY-homologous receiver domain AVI_RS09675 SM00855 Phosphoglycerate mutase family AVI_RS09745 SM00382 ATPases associated with a variety of cellular activities AVI_RS09750 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AVI_RS09765 SM00870 AVI_RS09765 AVI_RS09810 SM00382 ATPases associated with a variety of cellular activities AVI_RS09825 SM00796 Allophanate hydrolase subunit 1 AVI_RS09825 SM00797 Allophanate hydrolase subunit 2 AVI_RS09825 SM00878 Biotin carboxylase C-terminal domain AVI_RS09900 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AVI_RS09970 SM00382 ATPases associated with a variety of cellular activities AVI_RS09970 SM01086 C-terminal, D2-small domain, of ClpB protein AVI_RS09990 SM00971 Serine acetyltransferase, N-terminal AVI_RS10025 SM00062 Bacterial periplasmic substrate-binding proteins AVI_RS10040 SM00382 ATPases associated with a variety of cellular activities AVI_RS10055 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AVI_RS10060 SM00382 ATPases associated with a variety of cellular activities AVI_RS10110 SM00852 Probable molybdopterin binding domain AVI_RS10115 SM00014 Acid phosphatase homologues AVI_RS10135 SM00382 ATPases associated with a variety of cellular activities AVI_RS10190 SM00342 helix_turn_helix, arabinose operon control protein AVI_RS10230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS10230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS10250 SM00852 Probable molybdopterin binding domain AVI_RS10255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS10255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS10265 SM00260 Two component signalling adaptor domain AVI_RS10295 SM00422 helix_turn_helix, mercury resistance AVI_RS10300 SM00116 Domain in cystathionine beta-synthase and other proteins. AVI_RS10300 SM00924 MgtE intracellular N domain AVI_RS10410 SM00833 Cobalamin synthesis protein cobW C-terminal domain AVI_RS10455 SM01323 AVI_RS10455 AVI_RS10465 SM00257 Lysin motif AVI_RS10520 SM00836 DALR anticodon binding domain AVI_RS10520 SM01016 Arginyl tRNA synthetase N terminal dom AVI_RS10525 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AVI_RS10540 SM00671 Sel1-like repeats. AVI_RS10615 SM00382 ATPases associated with a variety of cellular activities AVI_RS10620 SM00382 ATPases associated with a variety of cellular activities AVI_RS10630 SM00420 helix_turn_helix, Deoxyribose operon repressor AVI_RS10630 SM01134 AVI_RS10630 AVI_RS10645 SM00382 ATPases associated with a variety of cellular activities AVI_RS10720 SM00382 ATPases associated with a variety of cellular activities AVI_RS10725 SM00448 cheY-homologous receiver domain AVI_RS10735 SM00530 Helix-turn-helix XRE-family like proteins AVI_RS10770 SM00382 ATPases associated with a variety of cellular activities AVI_RS10960 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AVI_RS10960 SM00091 PAS domain AVI_RS10960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS10965 SM00422 helix_turn_helix, mercury resistance AVI_RS11000 SM00344 helix_turn_helix ASNC type AVI_RS11020 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AVI_RS11020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS11040 SM00421 helix_turn_helix, Lux Regulon AVI_RS11040 SM00422 helix_turn_helix, mercury resistance AVI_RS11105 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AVI_RS11110 SM00244 prohibitin homologues AVI_RS11115 SM00244 prohibitin homologues AVI_RS11170 SM00382 ATPases associated with a variety of cellular activities AVI_RS11220 SM00564 beta-propeller repeat AVI_RS11285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS11285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS11290 SM00260 Two component signalling adaptor domain AVI_RS11305 SM00479 AVI_RS11305 AVI_RS11315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS11325 SM00487 DEAD-like helicases superfamily AVI_RS11325 SM00490 helicase superfamily c-terminal domain AVI_RS11335 SM00347 helix_turn_helix multiple antibiotic resistance protein AVI_RS11345 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AVI_RS11345 SM00292 breast cancer carboxy-terminal domain AVI_RS11345 SM00532 Ligase N family AVI_RS11355 SM00155 Phospholipase D. Active site motifs. AVI_RS11375 SM00864 Tubulin/FtsZ family, GTPase domain AVI_RS11375 SM00865 Tubulin/FtsZ family, C-terminal domain AVI_RS11380 SM00842 Cell division protein FtsA AVI_RS11475 SM00644 AVI_RS11475 AVI_RS11480 SM00271 DnaJ molecular chaperone homology domain AVI_RS11515 SM00641 Glycosyl hydrolases family 25 AVI_RS11530 SM00342 helix_turn_helix, arabinose operon control protein AVI_RS11540 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AVI_RS11545 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS11545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS11550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS11550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS11555 SM00382 ATPases associated with a variety of cellular activities AVI_RS11580 SM00347 helix_turn_helix multiple antibiotic resistance protein AVI_RS11640 SM00382 ATPases associated with a variety of cellular activities AVI_RS11645 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AVI_RS11645 SM00091 PAS domain AVI_RS11645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS11670 SM00530 Helix-turn-helix XRE-family like proteins AVI_RS11685 SM00422 helix_turn_helix, mercury resistance AVI_RS11700 SM01018 B12 binding domain AVI_RS11730 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVI_RS11990 SM00470 ParB-like nuclease domain AVI_RS12165 SM00530 Helix-turn-helix XRE-family like proteins AVI_RS12205 SM00357 Cold shock protein domain AVI_RS12225 SM00028 Tetratricopeptide repeats AVI_RS12245 SM00052 Putative diguanylate phosphodiesterase AVI_RS12245 SM00267 diguanylate cyclase AVI_RS12285 SM00400 zinc finger AVI_RS12285 SM00493 AVI_RS12285 AVI_RS12295 SM00729 Elongator protein 3, MiaB family, Radical SAM AVI_RS12295 SM00876 Biotin and Thiamin Synthesis associated domain AVI_RS12305 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AVI_RS12340 SM00851 MGS-like domain AVI_RS12340 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AVI_RS12390 SM00344 helix_turn_helix ASNC type AVI_RS12405 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AVI_RS12455 SM00357 Cold shock protein domain AVI_RS12460 SM00849 Metallo-beta-lactamase superfamily AVI_RS12470 SM00347 helix_turn_helix multiple antibiotic resistance protein AVI_RS12475 SM00448 cheY-homologous receiver domain AVI_RS12475 SM00862 Transcriptional regulatory protein, C terminal AVI_RS12480 SM00387 Histidine kinase-like ATPases AVI_RS12480 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS12535 SM01400 AVI_RS12535 AVI_RS12565 SM00052 Putative diguanylate phosphodiesterase AVI_RS12565 SM00091 PAS domain AVI_RS12565 SM00267 diguanylate cyclase AVI_RS12565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS12620 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain AVI_RS12655 SM00382 ATPases associated with a variety of cellular activities AVI_RS12665 SM00382 ATPases associated with a variety of cellular activities AVI_RS12760 SM00849 Metallo-beta-lactamase superfamily AVI_RS12795 SM00917 LeuA allosteric (dimerisation) domain AVI_RS12810 SM00344 helix_turn_helix ASNC type AVI_RS12900 SM00421 helix_turn_helix, Lux Regulon AVI_RS12930 SM00382 ATPases associated with a variety of cellular activities AVI_RS12940 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AVI_RS13015 SM00642 Alpha-amylase domain AVI_RS13080 SM01092 CO dehydrogenase flavoprotein C-terminal domain AVI_RS13085 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVI_RS13095 SM00028 Tetratricopeptide repeats AVI_RS13120 SM00382 ATPases associated with a variety of cellular activities AVI_RS13135 SM00344 helix_turn_helix ASNC type AVI_RS13150 SM00387 Histidine kinase-like ATPases AVI_RS13150 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS13155 SM00448 cheY-homologous receiver domain AVI_RS13155 SM00862 Transcriptional regulatory protein, C terminal AVI_RS13175 SM00823 Phosphopantetheine attachment site AVI_RS13175 SM00824 Thioesterase AVI_RS13180 SM01230 AVI_RS13180 AVI_RS13195 SM00829 Enoylreductase AVI_RS13210 SM00091 PAS domain AVI_RS13210 SM00267 diguanylate cyclase AVI_RS13235 SM00091 PAS domain AVI_RS13235 SM00387 Histidine kinase-like ATPases AVI_RS13235 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS13235 SM00448 cheY-homologous receiver domain AVI_RS13245 SM00487 DEAD-like helicases superfamily AVI_RS13245 SM00490 helicase superfamily c-terminal domain AVI_RS13280 SM00479 AVI_RS13280 AVI_RS13395 SM00382 ATPases associated with a variety of cellular activities AVI_RS13405 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AVI_RS13405 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AVI_RS13520 SM00347 helix_turn_helix multiple antibiotic resistance protein AVI_RS13530 SM00829 Enoylreductase AVI_RS13540 SM00460 Transglutaminase/protease-like homologues AVI_RS13565 SM00857 Resolvase, N terminal domain AVI_RS13610 SM00052 Putative diguanylate phosphodiesterase AVI_RS13610 SM00267 diguanylate cyclase AVI_RS13610 SM01079 AVI_RS13610 AVI_RS13645 SM00382 ATPases associated with a variety of cellular activities AVI_RS13675 SM00100 Cyclic nucleotide-monophosphate binding domain AVI_RS13675 SM00419 helix_turn_helix, cAMP Regulatory protein AVI_RS13680 SM00849 Metallo-beta-lactamase superfamily AVI_RS13695 SM00988 UreE urease accessory protein, N-terminal domain AVI_RS13700 SM00267 diguanylate cyclase AVI_RS13765 SM00382 ATPases associated with a variety of cellular activities AVI_RS13770 SM00382 ATPases associated with a variety of cellular activities AVI_RS13795 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AVI_RS13795 SM00448 cheY-homologous receiver domain AVI_RS13795 SM00911 HWE histidine kinase AVI_RS13805 SM00387 Histidine kinase-like ATPases AVI_RS13805 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS13805 SM00448 cheY-homologous receiver domain AVI_RS13815 SM00421 helix_turn_helix, Lux Regulon AVI_RS13815 SM00448 cheY-homologous receiver domain AVI_RS13840 SM00966 SpoVT / AbrB like domain AVI_RS13880 SM00382 ATPases associated with a variety of cellular activities AVI_RS13885 SM00382 ATPases associated with a variety of cellular activities AVI_RS13945 SM00448 cheY-homologous receiver domain AVI_RS13945 SM00862 Transcriptional regulatory protein, C terminal AVI_RS13950 SM00448 cheY-homologous receiver domain AVI_RS13985 SM00363 S4 RNA-binding domain AVI_RS14020 SM00788 Adenylosuccinate synthetase AVI_RS14055 SM00382 ATPases associated with a variety of cellular activities AVI_RS14100 SM00986 Uracil DNA glycosylase superfamily AVI_RS14100 SM00987 UreE urease accessory protein, C-terminal domain AVI_RS14145 SM00382 ATPases associated with a variety of cellular activities AVI_RS14150 SM00822 AVI_RS14150 AVI_RS14205 SM00382 ATPases associated with a variety of cellular activities AVI_RS14210 SM00342 helix_turn_helix, arabinose operon control protein AVI_RS14230 SM00978 AVI_RS14230 AVI_RS14280 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AVI_RS14285 SM00966 SpoVT / AbrB like domain AVI_RS14295 SM00382 ATPases associated with a variety of cellular activities AVI_RS14360 SM00382 ATPases associated with a variety of cellular activities AVI_RS14400 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVI_RS14405 SM00861 Transketolase, pyrimidine binding domain AVI_RS14425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS14425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS14455 SM00116 Domain in cystathionine beta-synthase and other proteins. AVI_RS14485 SM00382 ATPases associated with a variety of cellular activities AVI_RS14510 SM00671 Sel1-like repeats. AVI_RS14525 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AVI_RS14540 SM01001 AIR carboxylase AVI_RS14600 SM00382 ATPases associated with a variety of cellular activities AVI_RS14600 SM00448 cheY-homologous receiver domain AVI_RS14645 SM00257 Lysin motif AVI_RS14660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS14660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS14685 SM00244 prohibitin homologues AVI_RS14695 SM00116 Domain in cystathionine beta-synthase and other proteins. AVI_RS14725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS14725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS14735 SM00670 Large family of predicted nucleotide-binding domains AVI_RS14785 SM00448 cheY-homologous receiver domain AVI_RS14805 SM00460 Transglutaminase/protease-like homologues AVI_RS14815 SM00460 Transglutaminase/protease-like homologues AVI_RS14835 SM00642 Alpha-amylase domain AVI_RS14855 SM00642 Alpha-amylase domain AVI_RS14885 SM00028 Tetratricopeptide repeats AVI_RS14955 SM00530 Helix-turn-helix XRE-family like proteins AVI_RS14975 SM00354 helix_turn _helix lactose operon repressor AVI_RS14980 SM00347 helix_turn_helix multiple antibiotic resistance protein AVI_RS14990 SM00833 Cobalamin synthesis protein cobW C-terminal domain AVI_RS14995 SM00320 WD40 repeats AVI_RS15000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS15000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS15065 SM01118 AVI_RS15065 AVI_RS15070 SM00880 AVI_RS15070 AVI_RS15085 SM00450 Rhodanese Homology Domain AVI_RS15090 SM00052 Putative diguanylate phosphodiesterase AVI_RS15130 SM00354 helix_turn _helix lactose operon repressor AVI_RS15160 SM00478 endonuclease III AVI_RS15170 SM00342 helix_turn_helix, arabinose operon control protein AVI_RS15225 SM00671 Sel1-like repeats. AVI_RS15235 SM00382 ATPases associated with a variety of cellular activities AVI_RS15245 SM00028 Tetratricopeptide repeats AVI_RS15250 SM00028 Tetratricopeptide repeats AVI_RS15270 SM00382 ATPases associated with a variety of cellular activities AVI_RS15305 SM00382 ATPases associated with a variety of cellular activities AVI_RS15325 SM00382 ATPases associated with a variety of cellular activities AVI_RS15330 SM00382 ATPases associated with a variety of cellular activities AVI_RS15360 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVI_RS15360 SM00895 AVI_RS15360 AVI_RS15395 SM00858 AVI_RS15395 AVI_RS15405 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AVI_RS15405 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AVI_RS15420 SM00382 ATPases associated with a variety of cellular activities AVI_RS15470 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVI_RS15470 SM00895 AVI_RS15470 AVI_RS15480 SM00028 Tetratricopeptide repeats AVI_RS15480 SM01359 AVI_RS15480 AVI_RS15480 SM01360 AVI_RS15480 AVI_RS15490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS15490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS15530 SM00382 ATPases associated with a variety of cellular activities AVI_RS15550 SM00984 UDP binding domain AVI_RS15560 SM00100 Cyclic nucleotide-monophosphate binding domain AVI_RS15580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS15580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS15620 SM00382 ATPases associated with a variety of cellular activities AVI_RS15620 SM01086 C-terminal, D2-small domain, of ClpB protein AVI_RS15635 SM00937 AVI_RS15635 AVI_RS15640 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AVI_RS15730 SM00957 SecA DEAD-like domain AVI_RS15730 SM00958 SecA preprotein cross-linking domain AVI_RS15750 SM00267 diguanylate cyclase AVI_RS15795 SM00347 helix_turn_helix multiple antibiotic resistance protein AVI_RS15815 SM00507 HNH nucleases AVI_RS15820 SM00478 endonuclease III AVI_RS15850 SM00893 Electron transfer flavoprotein domain AVI_RS15855 SM00893 Electron transfer flavoprotein domain AVI_RS15895 SM00448 cheY-homologous receiver domain AVI_RS15910 SM00382 ATPases associated with a variety of cellular activities AVI_RS15925 SM00563 Phosphate acyltransferases AVI_RS15955 SM00849 Metallo-beta-lactamase superfamily AVI_RS15995 SM00327 von Willebrand factor (vWF) type A domain AVI_RS16005 SM00271 DnaJ molecular chaperone homology domain AVI_RS16050 SM00833 Cobalamin synthesis protein cobW C-terminal domain AVI_RS16075 SM00421 helix_turn_helix, Lux Regulon AVI_RS16080 SM00421 helix_turn_helix, Lux Regulon AVI_RS16100 SM00448 cheY-homologous receiver domain AVI_RS16105 SM00448 cheY-homologous receiver domain AVI_RS16110 SM00138 Methyltransferase, chemotaxis proteins AVI_RS16115 SM00260 Two component signalling adaptor domain AVI_RS16120 SM00073 Histidine Phosphotransfer domain AVI_RS16120 SM00260 Two component signalling adaptor domain AVI_RS16120 SM00387 Histidine kinase-like ATPases AVI_RS16120 SM01231 AVI_RS16120 AVI_RS16125 SM00448 cheY-homologous receiver domain AVI_RS16135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS16175 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AVI_RS16175 SM00091 PAS domain AVI_RS16175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS16180 SM00260 Two component signalling adaptor domain AVI_RS16200 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AVI_RS16200 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVI_RS16205 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AVI_RS16220 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AVI_RS16235 SM00382 ATPases associated with a variety of cellular activities AVI_RS16260 SM00487 DEAD-like helicases superfamily AVI_RS16260 SM00490 helicase superfamily c-terminal domain AVI_RS16265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS16265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS16300 SM00861 Transketolase, pyrimidine binding domain AVI_RS16305 SM00881 CoA binding domain AVI_RS16425 SM01152 AVI_RS16425 AVI_RS16440 SM00838 Elongation factor G C-terminus AVI_RS16515 SM00382 ATPases associated with a variety of cellular activities AVI_RS16555 SM00382 ATPases associated with a variety of cellular activities AVI_RS16590 SM00382 ATPases associated with a variety of cellular activities AVI_RS16590 SM00962 SRP54-type protein, GTPase domain AVI_RS16590 SM00963 SRP54-type protein, helical bundle domain AVI_RS16595 SM00729 Elongator protein 3, MiaB family, Radical SAM AVI_RS16615 SM00382 ATPases associated with a variety of cellular activities AVI_RS16615 SM00962 SRP54-type protein, GTPase domain AVI_RS16615 SM00963 SRP54-type protein, helical bundle domain AVI_RS16620 SM00830 Chorismate mutase type II AVI_RS16670 SM00062 Bacterial periplasmic substrate-binding proteins AVI_RS16670 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AVI_RS16715 SM00448 cheY-homologous receiver domain AVI_RS16715 SM00862 Transcriptional regulatory protein, C terminal AVI_RS16720 SM00100 Cyclic nucleotide-monophosphate binding domain AVI_RS16725 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain AVI_RS16740 SM00382 ATPases associated with a variety of cellular activities AVI_RS16740 SM00843 AVI_RS16740 AVI_RS16750 SM00938 Nitrogen regulatory protein P-II AVI_RS16770 SM00464 Found in ATP-dependent protease La (LON) AVI_RS16815 SM00382 ATPases associated with a variety of cellular activities AVI_RS16830 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AVI_RS16835 SM00382 ATPases associated with a variety of cellular activities AVI_RS16865 SM00382 ATPases associated with a variety of cellular activities AVI_RS16920 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AVI_RS16970 SM00798 AICARFT/IMPCHase bienzyme AVI_RS16970 SM00851 MGS-like domain AVI_RS17005 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AVI_RS17005 SM00245 tail specific protease AVI_RS17045 SM00448 cheY-homologous receiver domain AVI_RS17050 SM00138 Methyltransferase, chemotaxis proteins AVI_RS17055 SM00260 Two component signalling adaptor domain AVI_RS17060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS17060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS17065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS17065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS17070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS17070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS17075 SM00260 Two component signalling adaptor domain AVI_RS17080 SM00073 Histidine Phosphotransfer domain AVI_RS17080 SM00260 Two component signalling adaptor domain AVI_RS17080 SM00387 Histidine kinase-like ATPases AVI_RS17080 SM01231 AVI_RS17080 AVI_RS17085 SM00448 cheY-homologous receiver domain AVI_RS17095 SM00448 cheY-homologous receiver domain AVI_RS17095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AVI_RS17110 SM00344 helix_turn_helix ASNC type AVI_RS17120 SM00822 AVI_RS17120 AVI_RS17130 SM00822 AVI_RS17130 AVI_RS17130 SM00823 Phosphopantetheine attachment site AVI_RS17130 SM00825 Beta-ketoacyl synthase AVI_RS17130 SM00826 AVI_RS17130 AVI_RS17130 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AVI_RS17130 SM00829 Enoylreductase AVI_RS17190 SM00822 AVI_RS17190 AVI_RS17200 SM00490 helicase superfamily c-terminal domain AVI_RS17205 SM00363 S4 RNA-binding domain AVI_RS17215 SM01058 CarD-like/TRCF domain AVI_RS17245 SM01329 AVI_RS17245 AVI_RS17250 SM00014 Acid phosphatase homologues AVI_RS17260 SM00859 Semialdehyde dehydrogenase, NAD binding domain AVI_RS17275 SM00947 Carbonic anhydrase AVI_RS17295 SM01068 Putative carbohydrate binding domain AVI_RS17305 SM00382 ATPases associated with a variety of cellular activities AVI_RS17310 SM00421 helix_turn_helix, Lux Regulon AVI_RS17315 SM00878 Biotin carboxylase C-terminal domain AVI_RS17355 SM00470 ParB-like nuclease domain AVI_RS17370 SM01228 AVI_RS17370 AVI_RS17375 SM00382 ATPases associated with a variety of cellular activities AVI_RS17380 SM00357 Cold shock protein domain AVI_RS17380 SM00382 ATPases associated with a variety of cellular activities AVI_RS17380 SM00959 Rho termination factor, N-terminal domain AVI_RS18475 SM00482 DNA polymerase A domain AVI_RS18485 SM00474 3'-5' exonuclease AVI_RS19610 SM00098 Alkaline phosphatase homologues AVI_RS20760 SM00267 diguanylate cyclase AVI_RS21640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS22180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVI_RS22180 SM00388 His Kinase A (phosphoacceptor) domain AVI_RS22950 SM00925 MltA specific insert domain AVI_RS22975 SM00433 TopoisomeraseII AVI_RS23075 SM00996 S-adenosyl-L-homocysteine hydrolase AVI_RS23080 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AVI_RS23510 SM00433 TopoisomeraseII AVI_RS25180 SM00322 K homology RNA-binding domain AVI_RS25665 SM00482 DNA polymerase A domain AVI_RS26870 SM00028 Tetratricopeptide repeats AVI_RS27030 SM00480 DNA polymerase III beta subunit AVI_RS28975 SM00760 Bacterial dnaA protein helix-turn-helix domain AVI_RS29040 SM01040 BRO family, N-terminal domain AVI_RS29085 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AVI_RS29100 SM00421 helix_turn_helix, Lux Regulon AVI_RS29120 SM00530 Helix-turn-helix XRE-family like proteins AVI_RS29200 SM00287 Bacterial SH3 domain homologues AVI_RS29205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVI_RS29205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain