locus-tag	class	description
RvVAT039_RS00005	PF01738	Dienelactone hydrolase family
RvVAT039_RS00030	PF02563	Polysaccharide biosynthesis/export protein
RvVAT039_RS00035	PF02397	Bacterial sugar transferase
RvVAT039_RS00040	PF11089	Exopolysaccharide production repressor
RvVAT039_RS00045	PF00535	Glycosyl transferase family 2
RvVAT039_RS00050	PF04230	Polysaccharide pyruvyl transferase
RvVAT039_RS00055	PF00535	Glycosyl transferase family 2
RvVAT039_RS00060	PF01943	Polysaccharide biosynthesis protein
RvVAT039_RS00065	PF01757	Acyltransferase family
RvVAT039_RS00070	PF00722	Glycosyl hydrolases family 16
RvVAT039_RS00080	PF00535	Glycosyl transferase family 2
RvVAT039_RS00085	PF00535	Glycosyl transferase family 2
RvVAT039_RS00090	PF00535	Glycosyl transferase family 2
RvVAT039_RS00095	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
RvVAT039_RS00095	PF02706	Chain length determinant protein
RvVAT039_RS00095	PF13807	G-rich domain on putative tyrosine kinase
RvVAT039_RS00100	PF02887	Pyruvate kinase, alpha/beta domain
RvVAT039_RS00100	PF00224	Pyruvate kinase, barrel domain
RvVAT039_RS00135	PF01551	Peptidase family M23
RvVAT039_RS00135	PF08460	Bacterial SH3 domain
RvVAT039_RS00140	PF17871	AAA lid domain
RvVAT039_RS00140	PF10431	C-terminal, D2-small domain, of ClpB protein 
RvVAT039_RS00140	PF02861	Clp amino terminal domain, pathogenicity island component
RvVAT039_RS00140	PF07724	AAA domain (Cdc48 subfamily)
RvVAT039_RS00140	PF00004	ATPase family associated with various cellular activities (AAA)
RvVAT039_RS00150	PF17827	PrmC N-terminal domain
RvVAT039_RS00150	PF05175	Methyltransferase small domain
RvVAT039_RS00155	PF03462	PCRF domain
RvVAT039_RS00155	PF00472	RF-1 domain
RvVAT039_RS00160	PF01590	GAF domain
RvVAT039_RS00160	PF00391	PEP-utilising enzyme, mobile domain
RvVAT039_RS00160	PF05524	PEP-utilising enzyme, N-terminal
RvVAT039_RS00160	PF02896	PEP-utilising enzyme, TIM barrel domain
RvVAT039_RS00165	PF00696	Amino acid kinase family
RvVAT039_RS00165	PF01842	ACT domain
RvVAT039_RS00165	PF13840	ACT domain 
RvVAT039_RS00170	PF09924	Uncharacterised conserved protein (DUF2156)
RvVAT039_RS00170	PF03706	Lysylphosphatidylglycerol synthase TM region
RvVAT039_RS00185	PF08241	Methyltransferase domain
RvVAT039_RS00200	PF00795	Carbon-nitrogen hydrolase
RvVAT039_RS00205	PF00462	Glutaredoxin
RvVAT039_RS00210	PF00156	Phosphoribosyl transferase domain
RvVAT039_RS00215	PF08241	Methyltransferase domain
RvVAT039_RS00230	PF00293	NUDIX domain
RvVAT039_RS00240	PF01960	ArgJ family
RvVAT039_RS00250	PF01043	SecA preprotein cross-linking domain
RvVAT039_RS00250	PF02810	SEC-C motif
RvVAT039_RS00250	PF07516	SecA Wing and Scaffold domain
RvVAT039_RS00250	PF07517	SecA DEAD-like domain
RvVAT039_RS00265	PF00501	AMP-binding enzyme
RvVAT039_RS00265	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS00275	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS00275	PF17151	Periplasmic sensor domain
RvVAT039_RS00305	PF00749	tRNA synthetases class I (E and Q), catalytic domain
RvVAT039_RS00315	PF00106	short chain dehydrogenase
RvVAT039_RS00325	PF01923	Cobalamin adenosyltransferase
RvVAT039_RS00330	PF01012	Electron transfer flavoprotein domain
RvVAT039_RS00335	PF01012	Electron transfer flavoprotein domain
RvVAT039_RS00335	PF00766	Electron transfer flavoprotein FAD-binding domain
RvVAT039_RS00340	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS00340	PF00672	HAMP domain
RvVAT039_RS00345	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
RvVAT039_RS00345	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
RvVAT039_RS00350	PF13417	Glutathione S-transferase, N-terminal domain
RvVAT039_RS00350	PF00043	Glutathione S-transferase, C-terminal domain
RvVAT039_RS00355	PF08534	Redoxin
RvVAT039_RS00360	PF00206	Lyase
RvVAT039_RS00360	PF14698	Argininosuccinate lyase C-terminal
RvVAT039_RS00370	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
RvVAT039_RS00370	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
RvVAT039_RS00380	PF00072	Response regulator receiver domain
RvVAT039_RS00400	PF00005	ABC transporter
RvVAT039_RS00420	PF04752	ChaC-like protein
RvVAT039_RS00430	PF02153	Prephenate dehydrogenase
RvVAT039_RS00435	PF00155	Aminotransferase class I and II
RvVAT039_RS00440	PF01209	ubiE/COQ5 methyltransferase family
RvVAT039_RS00445	PF16123	Hydroxyacylglutathione hydrolase C-terminus
RvVAT039_RS00445	PF00753	Metallo-beta-lactamase superfamily
RvVAT039_RS00470	PF00830	Ribosomal L28 family
RvVAT039_RS00475	PF02592	Putative vitamin uptake transporter
RvVAT039_RS00485	PF11775	Cobalamin biosynthesis protein CobT VWA domain
RvVAT039_RS00485	PF06213	Cobalamin biosynthesis protein CobT
RvVAT039_RS00490	PF12556	Cobaltochelatase CobS subunit N terminal 
RvVAT039_RS00490	PF07728	AAA domain (dynein-related subfamily)
RvVAT039_RS00490	PF08406	CbbQ/NirQ/NorQ C-terminal 
RvVAT039_RS00495	PF00226	DnaJ domain
RvVAT039_RS00500	PF01722	BolA-like protein
RvVAT039_RS00505	PF01761	3-dehydroquinate synthase
RvVAT039_RS00510	PF01202	Shikimate kinase
RvVAT039_RS00525	PF00589	Phage integrase family
RvVAT039_RS00525	PF02899	Phage integrase, N-terminal SAM-like domain
RvVAT039_RS00530	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
RvVAT039_RS00535	PF03734	L,D-transpeptidase catalytic domain
RvVAT039_RS00540	PF01206	Sulfurtransferase TusA
RvVAT039_RS00545	PF07683	Cobalamin synthesis protein cobW C-terminal domain
RvVAT039_RS00545	PF02492	CobW/HypB/UreG, nucleotide-binding domain
RvVAT039_RS00550	PF00768	D-alanyl-D-alanine carboxypeptidase
RvVAT039_RS00550	PF07943	Penicillin-binding protein 5, C-terminal domain
RvVAT039_RS00555	PF01546	Peptidase family M20/M25/M40
RvVAT039_RS00555	PF07687	Peptidase dimerisation domain
RvVAT039_RS00565	PF01594	AI-2E family transporter
RvVAT039_RS00575	PF03472	Autoinducer binding domain
RvVAT039_RS00575	PF00196	Bacterial regulatory proteins, luxR family
RvVAT039_RS00580	PF08345	Flagellar M-ring protein C-terminal
RvVAT039_RS00580	PF01514	Secretory protein of YscJ/FliF family
RvVAT039_RS00590	PF03975	CheD chemotactic sensory transduction
RvVAT039_RS00595	PF00072	Response regulator receiver domain
RvVAT039_RS00600	PF00072	Response regulator receiver domain
RvVAT039_RS00600	PF01339	CheB methylesterase
RvVAT039_RS00605	PF03705	CheR methyltransferase, all-alpha domain
RvVAT039_RS00605	PF01739	CheR methyltransferase, SAM binding domain
RvVAT039_RS00610	PF01584	CheW-like domain
RvVAT039_RS00615	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS00615	PF02895	Signal transducing histidine kinase, homodimeric domain
RvVAT039_RS00615	PF01584	CheW-like domain
RvVAT039_RS00615	PF01627	Hpt domain
RvVAT039_RS00620	PF00072	Response regulator receiver domain
RvVAT039_RS00630	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS00635	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
RvVAT039_RS00635	PF13288	DXP reductoisomerase C-terminal domain
RvVAT039_RS00635	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
RvVAT039_RS00640	PF00144	Beta-lactamase
RvVAT039_RS00645	PF00155	Aminotransferase class I and II
RvVAT039_RS00655	PF01103	Surface antigen
RvVAT039_RS00655	PF17243	POTRA domain TamA domain 1
RvVAT039_RS00655	PF07244	Surface antigen variable number repeat
RvVAT039_RS00665	PF13426	PAS domain
RvVAT039_RS00665	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS00665	PF08447	PAS fold
RvVAT039_RS00670	PF01584	CheW-like domain
RvVAT039_RS00675	PF07690	Major Facilitator Superfamily
RvVAT039_RS00685	PF02634	FdhD/NarQ family
RvVAT039_RS00690	PF00384	Molybdopterin oxidoreductase
RvVAT039_RS00690	PF12838	4Fe-4S dicluster domain
RvVAT039_RS00690	PF01568	Molydopterin dinucleotide binding domain
RvVAT039_RS00690	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
RvVAT039_RS00690	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
RvVAT039_RS00695	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
RvVAT039_RS00695	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
RvVAT039_RS00695	PF00037	4Fe-4S binding domain
RvVAT039_RS00705	PF03466	LysR substrate binding domain
RvVAT039_RS00705	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS00710	PF01022	Bacterial regulatory protein, arsR family
RvVAT039_RS00715	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
RvVAT039_RS00715	PF00056	lactate/malate dehydrogenase, NAD binding domain
RvVAT039_RS00720	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
RvVAT039_RS00725	PF02874	ATP synthase alpha/beta family, beta-barrel domain
RvVAT039_RS00725	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
RvVAT039_RS00730	PF00231	ATP synthase
RvVAT039_RS00735	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
RvVAT039_RS00735	PF00306	ATP synthase alpha/beta chain, C terminal domain
RvVAT039_RS00735	PF02874	ATP synthase alpha/beta family, beta-barrel domain
RvVAT039_RS00740	PF00213	ATP synthase delta (OSCP) subunit
RvVAT039_RS00750	PF00270	DEAD/DEAH box helicase
RvVAT039_RS00750	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
RvVAT039_RS00750	PF18074	Primosomal protein N C-terminal domain
RvVAT039_RS00750	PF17764	3′ DNA-binding domain (3′BD)
RvVAT039_RS00755	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS00755	PF00672	HAMP domain
RvVAT039_RS00765	PF00589	Phage integrase family
RvVAT039_RS00765	PF02899	Phage integrase, N-terminal SAM-like domain
RvVAT039_RS00775	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
RvVAT039_RS00775	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RvVAT039_RS00780	PF01810	LysE type translocator
RvVAT039_RS00790	PF02817	e3 binding domain
RvVAT039_RS00790	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
RvVAT039_RS00790	PF00364	Biotin-requiring enzyme
RvVAT039_RS00795	PF16078	2-oxoglutarate dehydrogenase N-terminus
RvVAT039_RS00795	PF00676	Dehydrogenase E1 component
RvVAT039_RS00795	PF02779	Transketolase, pyrimidine binding domain
RvVAT039_RS00795	PF16870	2-oxoglutarate dehydrogenase C-terminal
RvVAT039_RS00800	PF02629	CoA binding domain
RvVAT039_RS00800	PF00549	CoA-ligase
RvVAT039_RS00810	PF00549	CoA-ligase
RvVAT039_RS00810	PF08442	ATP-grasp domain
RvVAT039_RS00815	PF00056	lactate/malate dehydrogenase, NAD binding domain
RvVAT039_RS00815	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
RvVAT039_RS00820	PF03969	AFG1-like ATPase
RvVAT039_RS00825	PF02974	Protease inhibitor Inh
RvVAT039_RS00830	PF13237	4Fe-4S dicluster domain
RvVAT039_RS00830	PF13085	2Fe-2S iron-sulfur cluster binding domain
RvVAT039_RS00835	PF02910	Fumarate reductase flavoprotein C-term
RvVAT039_RS00835	PF00890	FAD binding domain
RvVAT039_RS00845	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
RvVAT039_RS00865	PF03795	YCII-related domain
RvVAT039_RS00870	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
RvVAT039_RS00870	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
RvVAT039_RS00875	PF00814	Glycoprotease family
RvVAT039_RS00880	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
RvVAT039_RS00880	PF03900	Porphobilinogen deaminase, C-terminal domain
RvVAT039_RS00905	PF00117	Glutamine amidotransferase class-I
RvVAT039_RS00915	PF02325	YGGT family
RvVAT039_RS00920	PF02594	Uncharacterised ACR, YggU family COG1872
RvVAT039_RS00925	PF00719	Inorganic pyrophosphatase
RvVAT039_RS00940	PF16655	PhoD-like phosphatase, N-terminal domain
RvVAT039_RS00940	PF09423	PhoD-like phosphatase
RvVAT039_RS00945	PF01432	Peptidase family M3
RvVAT039_RS00950	PF07690	Major Facilitator Superfamily
RvVAT039_RS00955	PF00764	Arginosuccinate synthase
RvVAT039_RS00970	PF01810	LysE type translocator
RvVAT039_RS00980	PF04055	Radical SAM superfamily
RvVAT039_RS00995	PF01329	Pterin 4 alpha carbinolamine dehydratase
RvVAT039_RS01000	PF02834	LigT like Phosphoesterase
RvVAT039_RS01005	PF13472	GDSL-like Lipase/Acylhydrolase family
RvVAT039_RS01010	PF00005	ABC transporter
RvVAT039_RS01020	PF01027	Inhibitor of apoptosis-promoting Bax1
RvVAT039_RS01040	PF00694	Aconitase C-terminal domain
RvVAT039_RS01040	PF00330	Aconitase family (aconitate hydratase)
RvVAT039_RS01045	PF00005	ABC transporter
RvVAT039_RS01050	PF03379	CcmB protein
RvVAT039_RS01055	PF01578	Cytochrome C assembly protein
RvVAT039_RS01065	PF08534	Redoxin
RvVAT039_RS01070	PF10755	Protein of unknown function (DUF2585)
RvVAT039_RS01075	PF04279	Intracellular septation protein A 
RvVAT039_RS01080	PF02881	SRP54-type protein, helical bundle domain
RvVAT039_RS01080	PF00448	SRP54-type protein, GTPase domain
RvVAT039_RS01085	PF00919	Uncharacterized protein family UPF0004
RvVAT039_RS01085	PF04055	Radical SAM superfamily
RvVAT039_RS01090	PF01678	Diaminopimelate epimerase
RvVAT039_RS01095	PF12706	Beta-lactamase superfamily domain
RvVAT039_RS01105	PF02881	SRP54-type protein, helical bundle domain
RvVAT039_RS01105	PF02978	Signal peptide binding domain
RvVAT039_RS01105	PF00448	SRP54-type protein, GTPase domain
RvVAT039_RS01110	PF02153	Prephenate dehydrogenase
RvVAT039_RS01110	PF01817	Chorismate mutase type II
RvVAT039_RS01115	PF00886	Ribosomal protein S16
RvVAT039_RS01120	PF01782	RimM N-terminal domain
RvVAT039_RS01120	PF05239	PRC-barrel domain
RvVAT039_RS01125	PF01746	tRNA (Guanine-1)-methyltransferase
RvVAT039_RS01135	PF01245	Ribosomal protein L19
RvVAT039_RS01150	PF04234	CopC domain
RvVAT039_RS01155	PF05425	Copper resistance protein D
RvVAT039_RS01160	PF00497	Bacterial extracellular solute-binding proteins, family 3
RvVAT039_RS01165	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS01180	PF00330	Aconitase family (aconitate hydratase)
RvVAT039_RS01185	PF00248	Aldo/keto reductase family
RvVAT039_RS01195	PF00072	Response regulator receiver domain
RvVAT039_RS01195	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS01215	PF03548	Outer membrane lipoprotein carrier protein LolA
RvVAT039_RS01220	PF01580	FtsK/SpoIIIE family
RvVAT039_RS01220	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
RvVAT039_RS01220	PF17854	FtsK alpha domain
RvVAT039_RS01220	PF09397	Ftsk gamma domain
RvVAT039_RS01225	PF00909	Ammonium Transporter Family
RvVAT039_RS01230	PF00543	Nitrogen regulatory protein P-II
RvVAT039_RS01240	PF01494	FAD binding domain
RvVAT039_RS01245	PF03966	Trm112p-like protein
RvVAT039_RS01250	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
RvVAT039_RS01250	PF00004	ATPase family associated with various cellular activities (AAA)
RvVAT039_RS01250	PF05362	Lon protease (S16) C-terminal proteolytic domain
RvVAT039_RS01255	PF00085	Thioredoxin
RvVAT039_RS01270	PF07690	Major Facilitator Superfamily
RvVAT039_RS01275	PF01263	Aldose 1-epimerase
RvVAT039_RS01290	PF04204	Homoserine O-succinyltransferase 
RvVAT039_RS01295	PF00004	ATPase family associated with various cellular activities (AAA)
RvVAT039_RS01295	PF07724	AAA domain (Cdc48 subfamily)
RvVAT039_RS01295	PF10431	C-terminal, D2-small domain, of ClpB protein 
RvVAT039_RS01295	PF02861	Clp amino terminal domain, pathogenicity island component
RvVAT039_RS01295	PF17871	AAA lid domain
RvVAT039_RS01310	PF01165	Ribosomal protein S21
RvVAT039_RS01330	PF06472	ABC transporter transmembrane region 2
RvVAT039_RS01330	PF00005	ABC transporter
RvVAT039_RS01340	PF01547	Bacterial extracellular solute-binding protein
RvVAT039_RS01345	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS01350	PF00005	ABC transporter
RvVAT039_RS01355	PF01435	Peptidase family M48
RvVAT039_RS01360	PF00140	Sigma-70 factor, region 1.2
RvVAT039_RS01360	PF04545	Sigma-70, region 4
RvVAT039_RS01360	PF04542	Sigma-70 region 2 
RvVAT039_RS01365	PF00183	Hsp90 protein
RvVAT039_RS01370	PF00210	Ferritin-like domain
RvVAT039_RS01380	PF02590	Predicted SPOUT methyltransferase
RvVAT039_RS01390	PF01467	Cytidylyltransferase-like
RvVAT039_RS01395	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS01400	PF00696	Amino acid kinase family
RvVAT039_RS01400	PF01472	PUA domain
RvVAT039_RS01405	PF01018	GTP1/OBG
RvVAT039_RS01405	PF01926	50S ribosome-binding GTPase
RvVAT039_RS01425	PF01016	Ribosomal L27 protein
RvVAT039_RS01430	PF00829	Ribosomal prokaryotic L21 protein
RvVAT039_RS01440	PF00158	Sigma-54 interaction domain
RvVAT039_RS01440	PF06956	Regulator of RNA terminal phosphate cyclase
RvVAT039_RS01455	PF06213	Cobalamin biosynthesis protein CobT
RvVAT039_RS01455	PF11775	Cobalamin biosynthesis protein CobT VWA domain
RvVAT039_RS01460	PF05159	Capsule polysaccharide biosynthesis protein
RvVAT039_RS01465	PF05159	Capsule polysaccharide biosynthesis protein
RvVAT039_RS01470	PF02142	MGS-like domain
RvVAT039_RS01470	PF01808	AICARFT/IMPCHase bienzyme
RvVAT039_RS01480	PF01029	NusB family
RvVAT039_RS01480	PF01189	16S rRNA methyltransferase RsmB/F
RvVAT039_RS01485	PF01435	Peptidase family M48
RvVAT039_RS01505	PF03572	Peptidase family S41
RvVAT039_RS01505	PF13180	PDZ domain
RvVAT039_RS01515	PF00293	NUDIX domain
RvVAT039_RS01545	PF01339	CheB methylesterase
RvVAT039_RS01545	PF00072	Response regulator receiver domain
RvVAT039_RS01550	PF03705	CheR methyltransferase, all-alpha domain
RvVAT039_RS01550	PF01739	CheR methyltransferase, SAM binding domain
RvVAT039_RS01555	PF01584	CheW-like domain
RvVAT039_RS01560	PF02203	Tar ligand binding domain homologue
RvVAT039_RS01560	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS01560	PF00672	HAMP domain
RvVAT039_RS01565	PF17202	Single cache domain 3
RvVAT039_RS01565	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS01565	PF00672	HAMP domain
RvVAT039_RS01570	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS01570	PF02203	Tar ligand binding domain homologue
RvVAT039_RS01570	PF00672	HAMP domain
RvVAT039_RS01575	PF01584	CheW-like domain
RvVAT039_RS01580	PF01627	Hpt domain
RvVAT039_RS01580	PF02895	Signal transducing histidine kinase, homodimeric domain
RvVAT039_RS01580	PF01584	CheW-like domain
RvVAT039_RS01580	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS01580	PF07194	P2 response regulator binding domain
RvVAT039_RS01585	PF00072	Response regulator receiver domain
RvVAT039_RS01595	PF00072	Response regulator receiver domain
RvVAT039_RS01600	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RvVAT039_RS01600	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
RvVAT039_RS01605	PF18327	Proline utilization A proline dehydrogenase N-terminal domain 
RvVAT039_RS01605	PF14850	DNA-binding domain of Proline dehydrogenase
RvVAT039_RS01605	PF01619	Proline dehydrogenase
RvVAT039_RS01605	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS01610	PF01037	Lrp/AsnC ligand binding domain
RvVAT039_RS01620	PF01205	Uncharacterized protein family UPF0029
RvVAT039_RS01625	PF00106	short chain dehydrogenase
RvVAT039_RS01630	PF00155	Aminotransferase class I and II
RvVAT039_RS01635	PF00109	Beta-ketoacyl synthase, N-terminal domain
RvVAT039_RS01635	PF00698	Acyl transferase domain
RvVAT039_RS01635	PF08240	Alcohol dehydrogenase GroES-like domain
RvVAT039_RS01635	PF08659	KR domain
RvVAT039_RS01635	PF00550	Phosphopantetheine attachment site
RvVAT039_RS01635	PF08990	Erythronolide synthase docking
RvVAT039_RS01635	PF02801	Beta-ketoacyl synthase, C-terminal domain
RvVAT039_RS01635	PF16197	Ketoacyl-synthetase C-terminal extension
RvVAT039_RS01635	PF14765	Polyketide synthase dehydratase
RvVAT039_RS01640	PF07690	Major Facilitator Superfamily
RvVAT039_RS01645	PF04551	GcpE protein
RvVAT039_RS01650	PF00691	OmpA family
RvVAT039_RS01650	PF13488	Glycine zipper
RvVAT039_RS01660	PF00348	Polyprenyl synthetase
RvVAT039_RS01665	PF00912	Transglycosylase
RvVAT039_RS01675	PF01783	Ribosomal L32p protein family
RvVAT039_RS01680	PF07879	PHB/PHA accumulation regulator DNA-binding domain
RvVAT039_RS01680	PF05233	PHB accumulation regulatory domain
RvVAT039_RS01685	PF00108	Thiolase, N-terminal domain
RvVAT039_RS01685	PF02803	Thiolase, C-terminal domain
RvVAT039_RS01710	PF01479	S4 domain
RvVAT039_RS01715	PF00037	4Fe-4S binding domain
RvVAT039_RS01715	PF11953	Domain of unknown function (DUF3470)
RvVAT039_RS01735	PF03328	HpcH/HpaI aldolase/citrate lyase family
RvVAT039_RS01745	PF00694	Aconitase C-terminal domain
RvVAT039_RS01750	PF00180	Isocitrate/isopropylmalate dehydrogenase
RvVAT039_RS01755	PF01569	PAP2 superfamily
RvVAT039_RS01760	PF00083	Sugar (and other) transporter
RvVAT039_RS01760	PF08946	Osmosensory transporter coiled coil
RvVAT039_RS01765	PF02774	Semialdehyde dehydrogenase, dimerisation domain
RvVAT039_RS01765	PF01118	Semialdehyde dehydrogenase, NAD binding domain
RvVAT039_RS01780	PF00484	Carbonic anhydrase
RvVAT039_RS01785	PF08543	Phosphomethylpyrimidine kinase
RvVAT039_RS01790	PF05088	Bacterial NAD-glutamate dehydrogenase
RvVAT039_RS01800	PF17167	Glycosyl hydrolase 36 superfamily, catalytic domain
RvVAT039_RS01800	PF10091	Putative glucoamylase
RvVAT039_RS01800	PF06165	Glycosyltransferase family 36
RvVAT039_RS01805	PF01546	Peptidase family M20/M25/M40
RvVAT039_RS01805	PF07687	Peptidase dimerisation domain
RvVAT039_RS01810	PF00005	ABC transporter
RvVAT039_RS01810	PF00664	ABC transporter transmembrane region
RvVAT039_RS01820	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
RvVAT039_RS01820	PF02436	Conserved carboxylase domain
RvVAT039_RS01820	PF02785	Biotin carboxylase C-terminal domain
RvVAT039_RS01820	PF00364	Biotin-requiring enzyme
RvVAT039_RS01820	PF00682	HMGL-like
RvVAT039_RS01820	PF00289	Biotin carboxylase, N-terminal domain
RvVAT039_RS01830	PF16177	Acetyl-coenzyme A synthetase N-terminus
RvVAT039_RS01830	PF00501	AMP-binding enzyme
RvVAT039_RS01830	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS01840	PF01168	Alanine racemase, N-terminal domain
RvVAT039_RS01845	PF13603	Leucyl-tRNA synthetase, Domain 2
RvVAT039_RS01845	PF00133	tRNA synthetases class I (I, L, M and V)
RvVAT039_RS01845	PF08264	Anticodon-binding domain of tRNA
RvVAT039_RS01860	PF02195	ParB-like nuclease domain
RvVAT039_RS01860	PF17762	HTH domain found in ParB protein
RvVAT039_RS01865	PF13614	AAA domain
RvVAT039_RS01870	PF02527	rRNA small subunit methyltransferase G
RvVAT039_RS01875	PF01134	Glucose inhibited division protein A
RvVAT039_RS01875	PF13932	GidA associated domain
RvVAT039_RS01880	PF12631	MnmE helical domain
RvVAT039_RS01880	PF01926	50S ribosome-binding GTPase
RvVAT039_RS01880	PF10396	GTP-binding protein TrmE N-terminus
RvVAT039_RS01885	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
RvVAT039_RS01885	PF07497	Rho termination factor, RNA-binding domain
RvVAT039_RS01885	PF07498	Rho termination factor, N-terminal domain
RvVAT039_RS01895	PF01208	Uroporphyrinogen decarboxylase (URO-D)
RvVAT039_RS01900	PF03618	Kinase/pyrophosphorylase
RvVAT039_RS01905	PF02545	Maf-like protein
RvVAT039_RS01910	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
RvVAT039_RS01910	PF01488	Shikimate / quinate 5-dehydrogenase
RvVAT039_RS01910	PF08501	Shikimate dehydrogenase substrate binding domain
RvVAT039_RS01915	PF01121	Dephospho-CoA kinase
RvVAT039_RS01920	PF00929	Exonuclease
RvVAT039_RS01925	PF02556	Preprotein translocase subunit SecB
RvVAT039_RS01930	PF04186	FxsA cytoplasmic membrane protein 
RvVAT039_RS01940	PF03562	MltA specific insert domain
RvVAT039_RS01940	PF06725	3D domain
RvVAT039_RS01955	PF00986	DNA gyrase B subunit, carboxyl terminus
RvVAT039_RS01955	PF01751	Toprim domain
RvVAT039_RS01955	PF00204	DNA gyrase B
RvVAT039_RS01955	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS01980	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
RvVAT039_RS01985	PF00291	Pyridoxal-phosphate dependent enzyme
RvVAT039_RS01990	PF00290	Tryptophan synthase alpha chain
RvVAT039_RS01995	PF01039	Carboxyl transferase domain
RvVAT039_RS02000	PF02875	Mur ligase family, glutamate ligase domain
RvVAT039_RS02000	PF08245	Mur ligase middle domain
RvVAT039_RS02015	PF00085	Thioredoxin
RvVAT039_RS02025	PF00004	ATPase family associated with various cellular activities (AAA)
RvVAT039_RS02025	PF07724	AAA domain (Cdc48 subfamily)
RvVAT039_RS02025	PF10431	C-terminal, D2-small domain, of ClpB protein 
RvVAT039_RS02030	PF00227	Proteasome subunit
RvVAT039_RS02035	PF00475	Imidazoleglycerol-phosphate dehydratase
RvVAT039_RS02040	PF00117	Glutamine amidotransferase class-I
RvVAT039_RS02045	PF00977	Histidine biosynthesis protein
RvVAT039_RS02050	PF00977	Histidine biosynthesis protein
RvVAT039_RS02055	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
RvVAT039_RS02060	PF00485	Phosphoribulokinase / Uridine kinase family
RvVAT039_RS02070	PF00472	RF-1 domain
RvVAT039_RS02075	PF01293	Phosphoenolpyruvate carboxykinase
RvVAT039_RS02080	PF00072	Response regulator receiver domain
RvVAT039_RS02080	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS02085	PF13756	Stimulus-sensing domain
RvVAT039_RS02085	PF13755	Sensor N-terminal transmembrane domain
RvVAT039_RS02085	PF00672	HAMP domain
RvVAT039_RS02085	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS02085	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS02095	PF03610	PTS system fructose IIA component
RvVAT039_RS02095	PF03830	PTS system sorbose subfamily IIB component
RvVAT039_RS02100	PF00381	PTS HPr component phosphorylation site
RvVAT039_RS02105	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
RvVAT039_RS02105	PF05221	S-adenosyl-L-homocysteine hydrolase
RvVAT039_RS02110	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS02110	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS02115	PF01636	Phosphotransferase enzyme family
RvVAT039_RS02120	PF12804	MobA-like NTP transferase domain
RvVAT039_RS02125	PF12705	PD-(D/E)XK nuclease superfamily
RvVAT039_RS02130	PF12705	PD-(D/E)XK nuclease superfamily
RvVAT039_RS02130	PF13361	UvrD-like helicase C-terminal domain
RvVAT039_RS02130	PF00580	UvrD/REP helicase N-terminal domain
RvVAT039_RS02135	PF01274	Malate synthase
RvVAT039_RS02150	PF00072	Response regulator receiver domain
RvVAT039_RS02155	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS02155	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS02160	PF00270	DEAD/DEAH box helicase
RvVAT039_RS02160	PF08482	ATP-dependent helicase C-terminal
RvVAT039_RS02160	PF04408	Helicase associated domain (HA2)
RvVAT039_RS02160	PF00271	Helicase conserved C-terminal domain
RvVAT039_RS02165	PF02423	Ornithine cyclodeaminase/mu-crystallin family
RvVAT039_RS02205	PF07690	Major Facilitator Superfamily
RvVAT039_RS02210	PF00701	Dihydrodipicolinate synthetase family
RvVAT039_RS02215	PF00356	Bacterial regulatory proteins, lacI family
RvVAT039_RS02225	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
RvVAT039_RS02225	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
RvVAT039_RS02235	PF00294	pfkB family carbohydrate kinase
RvVAT039_RS02240	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
RvVAT039_RS02240	PF00205	Thiamine pyrophosphate enzyme, central domain
RvVAT039_RS02240	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
RvVAT039_RS02245	PF01261	Xylose isomerase-like TIM barrel
RvVAT039_RS02255	PF04962	KduI/IolB family
RvVAT039_RS02280	PF00106	short chain dehydrogenase
RvVAT039_RS02300	PF04545	Sigma-70, region 4
RvVAT039_RS02300	PF04542	Sigma-70 region 2 
RvVAT039_RS02305	PF12973	ChrR Cupin-like domain
RvVAT039_RS02315	PF00455	DeoR C terminal sensor domain
RvVAT039_RS02315	PF08220	DeoR-like helix-turn-helix domain
RvVAT039_RS02320	PF01266	FAD dependent oxidoreductase
RvVAT039_RS02320	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
RvVAT039_RS02325	PF08402	TOBE domain
RvVAT039_RS02325	PF00005	ABC transporter
RvVAT039_RS02330	PF00005	ABC transporter
RvVAT039_RS02335	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS02340	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS02360	PF00034	Cytochrome c
RvVAT039_RS02365	PF02348	Cytidylyltransferase
RvVAT039_RS02370	PF01817	Chorismate mutase type II
RvVAT039_RS02370	PF00800	Prephenate dehydratase
RvVAT039_RS02375	PF00933	Glycosyl hydrolase family 3 N terminal domain
RvVAT039_RS02380	PF00293	NUDIX domain
RvVAT039_RS02380	PF09296	NADH pyrophosphatase-like rudimentary NUDIX domain
RvVAT039_RS02380	PF09297	NADH pyrophosphatase zinc ribbon domain
RvVAT039_RS02395	PF12170	DNA polymerase III tau subunit V interacting with alpha
RvVAT039_RS02395	PF12168	DNA polymerase III subunits tau domain IV DnaB-binding
RvVAT039_RS02395	PF12169	DNA polymerase III subunits gamma and tau domain III
RvVAT039_RS02400	PF02575	YbaB/EbfC DNA-binding family
RvVAT039_RS02410	PF07411	Domain of unknown function (DUF1508)
RvVAT039_RS02425	PF12327	FtsZ family, C-terminal domain
RvVAT039_RS02425	PF00091	Tubulin/FtsZ family, GTPase domain
RvVAT039_RS02430	PF00679	Elongation factor G C-terminus
RvVAT039_RS02430	PF06421	GTP-binding protein LepA C-terminus
RvVAT039_RS02430	PF03144	Elongation factor Tu domain 2
RvVAT039_RS02430	PF00009	Elongation factor Tu GTP binding domain
RvVAT039_RS02440	PF16347	Domain of unknown function (DUF4976)
RvVAT039_RS02440	PF00884	Sulfatase
RvVAT039_RS02445	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
RvVAT039_RS02445	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
RvVAT039_RS02445	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
RvVAT039_RS02445	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
RvVAT039_RS02450	PF03061	Thioesterase superfamily
RvVAT039_RS02465	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
RvVAT039_RS02475	PF03960	ArsC family
RvVAT039_RS02480	PF04073	Aminoacyl-tRNA editing domain
RvVAT039_RS02485	PF02073	Thermophilic metalloprotease (M29)
RvVAT039_RS02500	PF00313	'Cold-shock' DNA-binding domain
RvVAT039_RS02505	PF02601	Exonuclease VII, large subunit
RvVAT039_RS02505	PF13742	OB-fold nucleic acid binding domain
RvVAT039_RS02520	PF00535	Glycosyl transferase family 2
RvVAT039_RS02530	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
RvVAT039_RS02530	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
RvVAT039_RS02535	PF00248	Aldo/keto reductase family
RvVAT039_RS02540	PF03466	LysR substrate binding domain
RvVAT039_RS02540	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS02545	PF00248	Aldo/keto reductase family
RvVAT039_RS02565	PF07690	Major Facilitator Superfamily
RvVAT039_RS02570	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS02570	PF03466	LysR substrate binding domain
RvVAT039_RS02580	PF13662	Toprim domain
RvVAT039_RS02580	PF02132	RecR protein
RvVAT039_RS02585	PF13406	Transglycosylase SLT domain
RvVAT039_RS02610	PF05977	Transmembrane secretion effector
RvVAT039_RS02615	PF02576	RimP N-terminal domain
RvVAT039_RS02615	PF17384	RimP C-terminal SH3 domain
RvVAT039_RS02620	PF00575	S1 RNA binding domain
RvVAT039_RS02620	PF08529	NusA N-terminal domain
RvVAT039_RS02620	PF13184	NusA-like KH domain
RvVAT039_RS02630	PF08364	Bacterial translation initiation factor IF-2 associated region
RvVAT039_RS02630	PF11987	Translation-initiation factor 2
RvVAT039_RS02630	PF00009	Elongation factor Tu GTP binding domain
RvVAT039_RS02630	PF04760	Translation initiation factor IF-2, N-terminal region
RvVAT039_RS02635	PF02033	Ribosome-binding factor A
RvVAT039_RS02640	PF01509	TruB family pseudouridylate synthase (N terminal domain)
RvVAT039_RS02640	PF16198	tRNA pseudouridylate synthase B C-terminal domain
RvVAT039_RS02640	PF09157	Pseudouridine synthase II TruB, C-terminal
RvVAT039_RS02645	PF00312	Ribosomal protein S15
RvVAT039_RS02650	PF03725	3' exoribonuclease family, domain 2
RvVAT039_RS02650	PF01138	3' exoribonuclease family, domain 1
RvVAT039_RS02650	PF00013	KH domain
RvVAT039_RS02650	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
RvVAT039_RS02650	PF00575	S1 RNA binding domain
RvVAT039_RS02655	PF08468	Methyltransferase small domain N-terminal
RvVAT039_RS02655	PF05175	Methyltransferase small domain
RvVAT039_RS02665	PF02801	Beta-ketoacyl synthase, C-terminal domain
RvVAT039_RS02665	PF00109	Beta-ketoacyl synthase, N-terminal domain
RvVAT039_RS02670	PF07977	FabA-like domain
RvVAT039_RS02675	PF01475	Ferric uptake regulator family
RvVAT039_RS02680	PF03458	UPF0126 domain
RvVAT039_RS02690	PF07690	Major Facilitator Superfamily
RvVAT039_RS02690	PF00083	Sugar (and other) transporter
RvVAT039_RS02705	PF02224	Cytidylate kinase
RvVAT039_RS02710	PF00575	S1 RNA binding domain
RvVAT039_RS02735	PF05198	Translation initiation factor IF-3, N-terminal domain
RvVAT039_RS02735	PF00707	Translation initiation factor IF-3, C-terminal domain
RvVAT039_RS02745	PF00072	Response regulator receiver domain
RvVAT039_RS02745	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS02750	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS02750	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS02750	PF00672	HAMP domain
RvVAT039_RS02750	PF16527	Two-component sensor protein CpxA, periplasmic domain
RvVAT039_RS02755	PF01632	Ribosomal protein L35
RvVAT039_RS02760	PF00453	Ribosomal protein L20
RvVAT039_RS02765	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
RvVAT039_RS02765	PF01409	tRNA synthetases class II core domain (F)
RvVAT039_RS02775	PF03147	Ferredoxin-fold anticodon binding domain
RvVAT039_RS02775	PF03484	tRNA synthetase B5 domain
RvVAT039_RS02775	PF03483	B3/4 domain
RvVAT039_RS02775	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
RvVAT039_RS02775	PF01588	Putative tRNA binding domain
RvVAT039_RS02780	PF07886	BA14K-like protein
RvVAT039_RS02805	PF00437	Type II/IV secretion system protein
RvVAT039_RS02820	PF04972	BON domain
RvVAT039_RS02820	PF13629	Pilus formation protein N terminal region
RvVAT039_RS02820	PF00263	Bacterial type II and III secretion system protein
RvVAT039_RS02860	PF01676	Metalloenzyme superfamily
RvVAT039_RS02865	PF00962	Adenosine/AMP deaminase
RvVAT039_RS02880	PF00300	Histidine phosphatase superfamily (branch 1)
RvVAT039_RS02885	PF05173	Dihydrodipicolinate reductase, C-terminus
RvVAT039_RS02885	PF01113	Dihydrodipicolinate reductase, N-terminus
RvVAT039_RS02890	PF00664	ABC transporter transmembrane region
RvVAT039_RS02890	PF00005	ABC transporter
RvVAT039_RS02895	PF02685	Glucokinase
RvVAT039_RS02900	PF02142	MGS-like domain
RvVAT039_RS02905	PF03411	Penicillin-insensitive murein endopeptidase
RvVAT039_RS02910	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS02915	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS02920	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS02920	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS02925	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS02925	PF00005	ABC transporter
RvVAT039_RS02930	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
RvVAT039_RS02940	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
RvVAT039_RS02940	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
RvVAT039_RS02950	PF00107	Zinc-binding dehydrogenase
RvVAT039_RS02950	PF08240	Alcohol dehydrogenase GroES-like domain
RvVAT039_RS02990	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
RvVAT039_RS02995	PF01048	Phosphorylase superfamily
RvVAT039_RS03000	PF01791	DeoC/LacD family aldolase
RvVAT039_RS03005	PF02885	Glycosyl transferase family, helical bundle domain
RvVAT039_RS03005	PF00591	Glycosyl transferase family, a/b domain
RvVAT039_RS03005	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
RvVAT039_RS03010	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS03010	PF07702	UTRA domain
RvVAT039_RS03015	PF06754	Phosphonate metabolism protein PhnG
RvVAT039_RS03020	PF05845	Bacterial phosphonate metabolism protein (PhnH)
RvVAT039_RS03025	PF05861	Bacterial phosphonate metabolism protein (PhnI)
RvVAT039_RS03030	PF06007	Phosphonate metabolism protein PhnJ
RvVAT039_RS03035	PF00005	ABC transporter
RvVAT039_RS03040	PF00005	ABC transporter
RvVAT039_RS03045	PF00132	Bacterial transferase hexapeptide (six repeats)
RvVAT039_RS03050	PF00005	ABC transporter
RvVAT039_RS03060	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS03065	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS03070	PF06299	Protein of unknown function (DUF1045)
RvVAT039_RS03075	PF07969	Amidohydrolase family
RvVAT039_RS03080	PF00625	Guanylate kinase
RvVAT039_RS03090	PF00883	Cytosol aminopeptidase family, catalytic domain
RvVAT039_RS03090	PF02789	Cytosol aminopeptidase family, N-terminal domain
RvVAT039_RS03095	PF04264	YceI-like domain
RvVAT039_RS03100	PF04264	YceI-like domain
RvVAT039_RS03110	PF00877	NlpC/P60 family
RvVAT039_RS03120	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
RvVAT039_RS03120	PF01612	3'-5' exonuclease
RvVAT039_RS03120	PF00476	DNA polymerase family A
RvVAT039_RS03120	PF01367	5'-3' exonuclease, C-terminal SAM fold
RvVAT039_RS03130	PF01546	Peptidase family M20/M25/M40
RvVAT039_RS03130	PF07687	Peptidase dimerisation domain
RvVAT039_RS03135	PF04073	Aminoacyl-tRNA editing domain
RvVAT039_RS03145	PF17092	Penicillin-binding protein OB-like domain
RvVAT039_RS03145	PF00905	Penicillin binding protein transpeptidase domain
RvVAT039_RS03145	PF00912	Transglycosylase
RvVAT039_RS03150	PF00012	Hsp70 protein
RvVAT039_RS03160	PF00684	DnaJ central domain
RvVAT039_RS03160	PF00226	DnaJ domain
RvVAT039_RS03160	PF01556	DnaJ C terminal domain
RvVAT039_RS03165	PF04102	SlyX
RvVAT039_RS03170	PF02463	RecF/RecN/SMC N terminal domain
RvVAT039_RS03175	PF00581	Rhodanese-like domain
RvVAT039_RS03175	PF00899	ThiF family
RvVAT039_RS03185	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
RvVAT039_RS03185	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
RvVAT039_RS03195	PF00294	pfkB family carbohydrate kinase
RvVAT039_RS03200	PF08447	PAS fold
RvVAT039_RS03200	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS03200	PF00563	EAL domain
RvVAT039_RS03200	PF08448	PAS fold
RvVAT039_RS03205	PF10070	Uncharacterized protein conserved in bacteria (DUF2309)
RvVAT039_RS03210	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
RvVAT039_RS03210	PF00361	Proton-conducting membrane transporter
RvVAT039_RS03215	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS03215	PF03466	LysR substrate binding domain
RvVAT039_RS03230	PF00440	Bacterial regulatory proteins, tetR family
RvVAT039_RS03235	PF00958	GMP synthase C terminal domain
RvVAT039_RS03235	PF00117	Glutamine amidotransferase class-I
RvVAT039_RS03235	PF02540	NAD synthase
RvVAT039_RS03250	PF03073	TspO/MBR family
RvVAT039_RS03275	PF01029	NusB family
RvVAT039_RS03275	PF01189	16S rRNA methyltransferase RsmB/F
RvVAT039_RS03280	PF03330	Lytic transglycolase
RvVAT039_RS03290	PF08331	Domain of unknown function (DUF1730)
RvVAT039_RS03295	PF13417	Glutathione S-transferase, N-terminal domain
RvVAT039_RS03295	PF00043	Glutathione S-transferase, C-terminal domain
RvVAT039_RS03300	PF02673	Bacitracin resistance protein BacA
RvVAT039_RS03320	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
RvVAT039_RS03330	PF13649	Methyltransferase domain
RvVAT039_RS03335	PF02767	DNA polymerase III beta subunit, central domain
RvVAT039_RS03335	PF02768	DNA polymerase III beta subunit, C-terminal domain
RvVAT039_RS03335	PF00712	DNA polymerase III beta subunit, N-terminal domain
RvVAT039_RS03340	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
RvVAT039_RS03345	PF02021	Uncharacterised protein family UPF0102
RvVAT039_RS03350	PF13416	Bacterial extracellular solute-binding protein
RvVAT039_RS03355	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS03360	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS03365	PF00005	ABC transporter
RvVAT039_RS03375	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
RvVAT039_RS03375	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
RvVAT039_RS03380	PF13335	Magnesium chelatase, subunit ChlI C-terminal
RvVAT039_RS03380	PF01078	Magnesium chelatase, subunit ChlI
RvVAT039_RS03385	PF00291	Pyridoxal-phosphate dependent enzyme
RvVAT039_RS03395	PF01810	LysE type translocator
RvVAT039_RS03400	PF00692	dUTPase
RvVAT039_RS03405	PF00009	Elongation factor Tu GTP binding domain
RvVAT039_RS03405	PF16658	Class II release factor RF3, C-terminal domain
RvVAT039_RS03405	PF03144	Elongation factor Tu domain 2
RvVAT039_RS03410	PF00982	Glycosyltransferase family 20
RvVAT039_RS03415	PF02358	Trehalose-phosphatase
RvVAT039_RS03420	PF08543	Phosphomethylpyrimidine kinase
RvVAT039_RS03435	PF02678	Pirin
RvVAT039_RS03435	PF05726	Pirin C-terminal cupin domain
RvVAT039_RS03450	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS03450	PF03466	LysR substrate binding domain
RvVAT039_RS03465	PF04127	DNA / pantothenate metabolism flavoprotein
RvVAT039_RS03465	PF02441	Flavoprotein
RvVAT039_RS03470	PF13426	PAS domain
RvVAT039_RS03470	PF07568	Histidine kinase
RvVAT039_RS03470	PF13581	Histidine kinase-like ATPase domain
RvVAT039_RS03475	PF00072	Response regulator receiver domain
RvVAT039_RS03480	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS03480	PF01627	Hpt domain
RvVAT039_RS03480	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS03480	PF00497	Bacterial extracellular solute-binding proteins, family 3
RvVAT039_RS03480	PF00072	Response regulator receiver domain
RvVAT039_RS03485	PF03109	ABC1 family
RvVAT039_RS03490	PF01209	ubiE/COQ5 methyltransferase family
RvVAT039_RS03495	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
RvVAT039_RS03495	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
RvVAT039_RS03500	PF01649	Ribosomal protein S20
RvVAT039_RS03510	PF11638	DnaA N-terminal domain
RvVAT039_RS03510	PF00308	Bacterial dnaA  protein
RvVAT039_RS03510	PF08299	Bacterial dnaA protein helix-turn-helix
RvVAT039_RS03515	PF00892	EamA-like transporter family
RvVAT039_RS03520	PF13649	Methyltransferase domain
RvVAT039_RS03525	PF06969	HemN C-terminal domain
RvVAT039_RS03525	PF04055	Radical SAM superfamily
RvVAT039_RS03530	PF01725	Ham1 family
RvVAT039_RS03540	PF01138	3' exoribonuclease family, domain 1
RvVAT039_RS03540	PF03725	3' exoribonuclease family, domain 2
RvVAT039_RS03545	PF01628	HrcA protein C terminal domain
RvVAT039_RS03550	PF01025	GrpE
RvVAT039_RS03555	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
RvVAT039_RS03560	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus
RvVAT039_RS03560	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
RvVAT039_RS03565	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
RvVAT039_RS03565	PF04963	Sigma-54 factor, core binding domain
RvVAT039_RS03565	PF04552	Sigma-54, DNA binding domain
RvVAT039_RS03570	PF00005	ABC transporter
RvVAT039_RS03575	PF03968	OstA-like protein
RvVAT039_RS03585	PF00216	Bacterial DNA-binding protein
RvVAT039_RS03595	PF01170	Putative RNA methylase family UPF0020
RvVAT039_RS03595	PF02926	THUMP domain
RvVAT039_RS03595	PF10672	S-adenosylmethionine-dependent methyltransferase
RvVAT039_RS03600	PF00588	SpoU rRNA Methylase family
RvVAT039_RS03600	PF08032	RNA 2'-O ribose methyltransferase substrate binding
RvVAT039_RS03605	PF01252	Signal peptidase (SPase) II
RvVAT039_RS03610	PF00672	HAMP domain
RvVAT039_RS03610	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
RvVAT039_RS03610	PF01627	Hpt domain
RvVAT039_RS03610	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS03610	PF00072	Response regulator receiver domain
RvVAT039_RS03610	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS03620	PF00488	MutS domain V
RvVAT039_RS03620	PF01624	MutS domain I
RvVAT039_RS03620	PF05190	MutS family domain IV
RvVAT039_RS03620	PF05192	MutS domain III
RvVAT039_RS03620	PF05188	MutS domain II
RvVAT039_RS03625	PF01842	ACT domain
RvVAT039_RS03625	PF01966	HD domain
RvVAT039_RS03625	PF08335	GlnD PII-uridylyltransferase
RvVAT039_RS03630	PF03023	Lipid II flippase MurJ
RvVAT039_RS03635	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
RvVAT039_RS03640	PF00579	tRNA synthetases class I (W and Y)
RvVAT039_RS03650	PF01106	NifU-like domain
RvVAT039_RS03655	PF00814	Glycoprotease family
RvVAT039_RS03665	PF01475	Ferric uptake regulator family
RvVAT039_RS03675	PF04055	Radical SAM superfamily
RvVAT039_RS03675	PF00919	Uncharacterized protein family UPF0004
RvVAT039_RS03675	PF01938	TRAM domain
RvVAT039_RS03680	PF02562	PhoH-like protein
RvVAT039_RS03685	PF02130	Uncharacterized protein family UPF0054
RvVAT039_RS03690	PF03471	Transporter associated domain
RvVAT039_RS03690	PF00571	CBS domain
RvVAT039_RS03695	PF00795	Carbon-nitrogen hydrolase
RvVAT039_RS03700	PF01381	Helix-turn-helix
RvVAT039_RS03705	PF02772	S-adenosylmethionine synthetase, central domain
RvVAT039_RS03705	PF02773	S-adenosylmethionine synthetase, C-terminal domain
RvVAT039_RS03705	PF00438	S-adenosylmethionine synthetase, N-terminal domain
RvVAT039_RS03710	PF02390	Putative methyltransferase 
RvVAT039_RS03720	PF00011	Hsp20/alpha crystallin family
RvVAT039_RS03725	PF01156	Inosine-uridine preferring nucleoside hydrolase
RvVAT039_RS03740	PF00672	HAMP domain
RvVAT039_RS03740	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS03750	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS03750	PF03466	LysR substrate binding domain
RvVAT039_RS03760	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS03765	PF00468	Ribosomal protein L34
RvVAT039_RS03770	PF00825	Ribonuclease P
RvVAT039_RS03775	PF02096	60Kd inner membrane protein
RvVAT039_RS03775	PF14849	YidC periplasmic domain
RvVAT039_RS03780	PF01926	50S ribosome-binding GTPase
RvVAT039_RS03785	PF02469	Fasciclin domain
RvVAT039_RS03800	PF00696	Amino acid kinase family
RvVAT039_RS03805	PF00294	pfkB family carbohydrate kinase
RvVAT039_RS03820	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
RvVAT039_RS03820	PF00460	Flagella basal body rod protein
RvVAT039_RS03820	PF07559	Flagellar basal body protein FlaE
RvVAT039_RS03830	PF00132	Bacterial transferase hexapeptide (six repeats)
RvVAT039_RS03830	PF14602	Hexapeptide repeat of succinyl-transferase
RvVAT039_RS03830	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
RvVAT039_RS03835	PF01546	Peptidase family M20/M25/M40
RvVAT039_RS03835	PF07687	Peptidase dimerisation domain
RvVAT039_RS03850	PF13660	Domain of unknown function (DUF4147)
RvVAT039_RS03850	PF05161	MOFRL family
RvVAT039_RS03855	PF01430	Hsp33 protein
RvVAT039_RS03860	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
RvVAT039_RS03860	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
RvVAT039_RS03865	PF00202	Aminotransferase class-III
RvVAT039_RS03875	PF00072	Response regulator receiver domain
RvVAT039_RS03875	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS03880	PF01895	PhoU domain
RvVAT039_RS03885	PF00005	ABC transporter
RvVAT039_RS03890	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS03895	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS03905	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS03905	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS03905	PF16736	Single Cache-like 
RvVAT039_RS03905	PF00989	PAS fold
RvVAT039_RS03910	PF03976	Polyphosphate kinase 2 (PPK2)
RvVAT039_RS03935	PF00202	Aminotransferase class-III
RvVAT039_RS03940	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
RvVAT039_RS03950	PF03480	Bacterial extracellular solute-binding protein, family 7
RvVAT039_RS03955	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS03970	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
RvVAT039_RS03970	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
RvVAT039_RS03980	PF05544	Proline racemase
RvVAT039_RS03985	PF00027	Cyclic nucleotide-binding domain
RvVAT039_RS03985	PF13545	Crp-like helix-turn-helix domain
RvVAT039_RS03990	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS03990	PF00072	Response regulator receiver domain
RvVAT039_RS04000	PF00072	Response regulator receiver domain
RvVAT039_RS04000	PF00672	HAMP domain
RvVAT039_RS04000	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS04000	PF01627	Hpt domain
RvVAT039_RS04000	PF17149	Periplasmic sensor domain found in signal transduction proteins
RvVAT039_RS04000	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS04005	PF00072	Response regulator receiver domain
RvVAT039_RS04010	PF01979	Amidohydrolase family
RvVAT039_RS04015	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS04020	PF00156	Phosphoribosyl transferase domain
RvVAT039_RS04025	PF00294	pfkB family carbohydrate kinase
RvVAT039_RS04035	PF00342	Phosphoglucose isomerase
RvVAT039_RS04040	PF00501	AMP-binding enzyme
RvVAT039_RS04040	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS04050	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
RvVAT039_RS04050	PF00128	Alpha amylase, catalytic domain
RvVAT039_RS04065	PF01416	tRNA pseudouridine synthase
RvVAT039_RS04070	PF00551	Formyl transferase
RvVAT039_RS04070	PF02911	Formyl transferase, C-terminal domain
RvVAT039_RS04075	PF01327	Polypeptide deformylase
RvVAT039_RS04080	PF04379	ApaG domain 
RvVAT039_RS04085	PF01053	Cys/Met metabolism PLP-dependent enzyme
RvVAT039_RS04090	PF00692	dUTPase
RvVAT039_RS04130	PF02384	N-6 DNA Methylase
RvVAT039_RS04135	PF01420	Type I restriction modification DNA specificity domain
RvVAT039_RS04155	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
RvVAT039_RS04155	PF11867	Domain of unknown function (DUF3387)
RvVAT039_RS04155	PF18766	SWI2/SNF2 ATPase
RvVAT039_RS04165	PF13533	Biotin-lipoyl like
RvVAT039_RS04170	PF00005	ABC transporter
RvVAT039_RS04170	PF00664	ABC transporter transmembrane region
RvVAT039_RS04170	PF03412	Peptidase C39 family
RvVAT039_RS04205	PF00497	Bacterial extracellular solute-binding proteins, family 3
RvVAT039_RS04220	PF00072	Response regulator receiver domain
RvVAT039_RS04220	PF00196	Bacterial regulatory proteins, luxR family
RvVAT039_RS04230	PF01180	Dihydroorotate dehydrogenase
RvVAT039_RS04270	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
RvVAT039_RS04270	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
RvVAT039_RS04270	PF00378	Enoyl-CoA hydratase/isomerase
RvVAT039_RS04275	PF00108	Thiolase, N-terminal domain
RvVAT039_RS04275	PF02803	Thiolase, C-terminal domain
RvVAT039_RS04280	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
RvVAT039_RS04280	PF02770	Acyl-CoA dehydrogenase, middle domain
RvVAT039_RS04280	PF12806	Acetyl-CoA dehydrogenase C-terminal like
RvVAT039_RS04280	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
RvVAT039_RS04290	PF01925	Sulfite exporter TauE/SafE
RvVAT039_RS04300	PF00245	Alkaline phosphatase
RvVAT039_RS04310	PF00005	ABC transporter
RvVAT039_RS04325	PF00563	EAL domain
RvVAT039_RS04325	PF01590	GAF domain
RvVAT039_RS04325	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS04325	PF00360	Phytochrome region
RvVAT039_RS04330	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
RvVAT039_RS04330	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
RvVAT039_RS04335	PF00497	Bacterial extracellular solute-binding proteins, family 3
RvVAT039_RS04340	PF00271	Helicase conserved C-terminal domain
RvVAT039_RS04340	PF08494	DEAD/H associated
RvVAT039_RS04340	PF00270	DEAD/DEAH box helicase
RvVAT039_RS04350	PF00069	Protein kinase domain
RvVAT039_RS04350	PF03793	PASTA domain
RvVAT039_RS04360	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
RvVAT039_RS04365	PF00072	Response regulator receiver domain
RvVAT039_RS04365	PF00672	HAMP domain
RvVAT039_RS04365	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS04365	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS04365	PF01627	Hpt domain
RvVAT039_RS04370	PF01741	Large-conductance mechanosensitive channel, MscL
RvVAT039_RS04375	PF00155	Aminotransferase class I and II
RvVAT039_RS04380	PF01370	NAD dependent epimerase/dehydratase family
RvVAT039_RS04385	PF00483	Nucleotidyl transferase
RvVAT039_RS04390	PF16363	GDP-mannose 4,6 dehydratase
RvVAT039_RS04395	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
RvVAT039_RS04400	PF08421	Putative zinc binding domain
RvVAT039_RS04400	PF08484	C-methyltransferase C-terminal domain
RvVAT039_RS04415	PF01370	NAD dependent epimerase/dehydratase family
RvVAT039_RS04430	PF03884	DNA gyrase inhibitor YacG
RvVAT039_RS04435	PF02545	Maf-like protein
RvVAT039_RS04440	PF01176	Translation initiation factor 1A / IF-1
RvVAT039_RS04450	PF06793	Uncharacterised protein family (UPF0262)
RvVAT039_RS04455	PF00815	Histidinol dehydrogenase
RvVAT039_RS04465	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
RvVAT039_RS04490	PF00005	ABC transporter
RvVAT039_RS04500	PF00535	Glycosyl transferase family 2
RvVAT039_RS04510	PF12848	ABC transporter
RvVAT039_RS04510	PF00005	ABC transporter
RvVAT039_RS04520	PF00593	TonB dependent receptor
RvVAT039_RS04520	PF07715	TonB-dependent Receptor Plug Domain
RvVAT039_RS04535	PF01312	FlhB HrpN YscU SpaS Family
RvVAT039_RS04540	PF14841	FliG middle domain
RvVAT039_RS04540	PF14842	FliG N-terminal domain
RvVAT039_RS04540	PF01706	FliG C-terminal domain
RvVAT039_RS04545	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
RvVAT039_RS04550	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
RvVAT039_RS04555	PF01618	MotA/TolQ/ExbB proton channel family
RvVAT039_RS04560	PF00460	Flagella basal body rod protein
RvVAT039_RS04560	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
RvVAT039_RS04565	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
RvVAT039_RS04565	PF18269	T3SS EscN ATPase C-terminal domain
RvVAT039_RS04575	PF00460	Flagella basal body rod protein
RvVAT039_RS04580	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
RvVAT039_RS04585	PF02049	Flagellar hook-basal body complex protein FliE
RvVAT039_RS04590	PF00460	Flagella basal body rod protein
RvVAT039_RS04590	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
RvVAT039_RS04595	PF13144	Chaperone for flagella basal body P-ring formation
RvVAT039_RS04600	PF02119	Flagellar P-ring protein
RvVAT039_RS04610	PF02107	Flagellar L-ring protein
RvVAT039_RS04620	PF00813	FliP family
RvVAT039_RS04625	PF00700	Bacterial flagellin C-terminal helical region
RvVAT039_RS04625	PF00669	Bacterial flagellin N-terminal helical region
RvVAT039_RS04630	PF00669	Bacterial flagellin N-terminal helical region
RvVAT039_RS04630	PF00700	Bacterial flagellin C-terminal helical region
RvVAT039_RS04635	PF00700	Bacterial flagellin C-terminal helical region
RvVAT039_RS04635	PF00669	Bacterial flagellin N-terminal helical region
RvVAT039_RS04640	PF00700	Bacterial flagellin C-terminal helical region
RvVAT039_RS04640	PF00669	Bacterial flagellin N-terminal helical region
RvVAT039_RS04645	PF00669	Bacterial flagellin N-terminal helical region
RvVAT039_RS04645	PF00700	Bacterial flagellin C-terminal helical region
RvVAT039_RS04655	PF00691	OmpA family
RvVAT039_RS04655	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
RvVAT039_RS04675	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS04680	PF00460	Flagella basal body rod protein
RvVAT039_RS04680	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
RvVAT039_RS04680	PF07559	Flagellar basal body protein FlaE
RvVAT039_RS04685	PF00460	Flagella basal body rod protein
RvVAT039_RS04685	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
RvVAT039_RS04700	PF07378	Flagellar protein FlbT
RvVAT039_RS04705	PF03963	Flagellar hook capping protein - N-terminal region
RvVAT039_RS04710	PF01313	Bacterial export proteins, family 3
RvVAT039_RS04715	PF00771	FHIPEP family
RvVAT039_RS04750	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
RvVAT039_RS04750	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
RvVAT039_RS04755	PF00356	Bacterial regulatory proteins, lacI family
RvVAT039_RS04760	PF01547	Bacterial extracellular solute-binding protein
RvVAT039_RS04765	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS04770	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS04775	PF00128	Alpha amylase, catalytic domain
RvVAT039_RS04780	PF03459	TOBE domain
RvVAT039_RS04780	PF00005	ABC transporter
RvVAT039_RS04780	PF17912	MalK OB fold domain
RvVAT039_RS04795	PF03390	2-hydroxycarboxylate transporter family
RvVAT039_RS04800	PF02203	Tar ligand binding domain homologue
RvVAT039_RS04800	PF00672	HAMP domain
RvVAT039_RS04800	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS04805	PF00920	Dehydratase family
RvVAT039_RS04810	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
RvVAT039_RS04815	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
RvVAT039_RS04815	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
RvVAT039_RS04825	PF01266	FAD dependent oxidoreductase
RvVAT039_RS04830	PF00120	Glutamine synthetase, catalytic domain
RvVAT039_RS04850	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS04850	PF00672	HAMP domain
RvVAT039_RS04865	PF07690	Major Facilitator Superfamily
RvVAT039_RS04875	PF00463	Isocitrate lyase family
RvVAT039_RS04880	PF09856	Predicted transcriptional regulator (DUF2083)
RvVAT039_RS04880	PF01381	Helix-turn-helix
RvVAT039_RS04880	PF06114	IrrE N-terminal-like domain
RvVAT039_RS04890	PF13416	Bacterial extracellular solute-binding protein
RvVAT039_RS04895	PF00005	ABC transporter
RvVAT039_RS04895	PF08402	TOBE domain
RvVAT039_RS04900	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS04905	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS04915	PF13426	PAS domain
RvVAT039_RS04915	PF13188	PAS domain
RvVAT039_RS04915	PF00989	PAS fold
RvVAT039_RS04915	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS04915	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS04960	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS04965	PF02082	Transcriptional regulator
RvVAT039_RS04970	PF01202	Shikimate kinase
RvVAT039_RS04975	PF02611	CDP-diacylglycerol pyrophosphatase
RvVAT039_RS04985	PF01266	FAD dependent oxidoreductase
RvVAT039_RS04990	PF07470	Glycosyl Hydrolase Family 88
RvVAT039_RS05000	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS05000	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS05000	PF00672	HAMP domain
RvVAT039_RS05005	PF00072	Response regulator receiver domain
RvVAT039_RS05005	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS05010	PF06039	Malate:quinone oxidoreductase (Mqo)
RvVAT039_RS05025	PF02541	Ppx/GppA phosphatase family
RvVAT039_RS05030	PF01728	FtsJ-like methyltransferase
RvVAT039_RS05040	PF13188	PAS domain
RvVAT039_RS05040	PF03707	Bacterial signalling protein N terminal repeat
RvVAT039_RS05040	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS05040	PF00563	EAL domain
RvVAT039_RS05045	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS05045	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS05045	PF00989	PAS fold
RvVAT039_RS05045	PF01627	Hpt domain
RvVAT039_RS05045	PF00072	Response regulator receiver domain
RvVAT039_RS05045	PF18415	Histidine kinase receptor ArcB trans-membrane domain
RvVAT039_RS05050	PF01119	DNA mismatch repair protein, C-terminal domain
RvVAT039_RS05050	PF08676	MutL C terminal dimerisation domain
RvVAT039_RS05060	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
RvVAT039_RS05070	PF00534	Glycosyl transferases group 1
RvVAT039_RS05070	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
RvVAT039_RS05080	PF00459	Inositol monophosphatase family
RvVAT039_RS05085	PF01523	Putative modulator of DNA gyrase
RvVAT039_RS05090	PF02254	TrkA-N domain
RvVAT039_RS05090	PF00999	Sodium/hydrogen exchanger family
RvVAT039_RS05095	PF01734	Patatin-like phospholipase
RvVAT039_RS05105	PF01479	S4 domain
RvVAT039_RS05105	PF00849	RNA pseudouridylate synthase
RvVAT039_RS05110	PF14437	MafB19-like deaminase
RvVAT039_RS05115	PF00753	Metallo-beta-lactamase superfamily
RvVAT039_RS05120	PF07690	Major Facilitator Superfamily
RvVAT039_RS05130	PF08450	SMP-30/Gluconolactonase/LRE-like region
RvVAT039_RS05135	PF00196	Bacterial regulatory proteins, luxR family
RvVAT039_RS05135	PF03472	Autoinducer binding domain
RvVAT039_RS05145	PF10609	NUBPL iron-transfer P-loop NTPase
RvVAT039_RS05150	PF01544	CorA-like Mg2+ transporter protein
RvVAT039_RS05155	PF02705	K+ potassium transporter
RvVAT039_RS05160	PF09527	Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter
RvVAT039_RS05165	PF00119	ATP synthase A chain
RvVAT039_RS05170	PF00137	ATP synthase subunit C
RvVAT039_RS05175	PF00430	ATP synthase B/B' CF(0)
RvVAT039_RS05180	PF00430	ATP synthase B/B' CF(0)
RvVAT039_RS05185	PF01351	Ribonuclease HII
RvVAT039_RS05190	PF04055	Radical SAM superfamily
RvVAT039_RS05200	PF00994	Probable molybdopterin binding domain
RvVAT039_RS05205	PF00288	GHMP kinases N terminal domain
RvVAT039_RS05205	PF08544	GHMP kinases C terminal 
RvVAT039_RS05215	PF00348	Polyprenyl synthetase
RvVAT039_RS05230	PF06965	Na+/H+ antiporter 1
RvVAT039_RS05230	PF01343	Peptidase family S49
RvVAT039_RS05240	PF13426	PAS domain
RvVAT039_RS05240	PF07536	HWE histidine kinase
RvVAT039_RS05240	PF08447	PAS fold
RvVAT039_RS05245	PF02091	Glycyl-tRNA synthetase alpha subunit
RvVAT039_RS05255	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
RvVAT039_RS05260	PF05746	DALR anticodon binding domain
RvVAT039_RS05260	PF02092	Glycyl-tRNA synthetase beta subunit
RvVAT039_RS05265	PF04463	Protein of unknown function (DUF523)
RvVAT039_RS05270	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS05270	PF00672	HAMP domain
RvVAT039_RS05270	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS05270	PF17200	Single Cache domain 2
RvVAT039_RS05270	PF00672	HAMP domain
RvVAT039_RS05270	PF17200	Single Cache domain 2
RvVAT039_RS05280	PF02843	Phosphoribosylglycinamide synthetase, C domain
RvVAT039_RS05280	PF02844	Phosphoribosylglycinamide synthetase, N domain
RvVAT039_RS05280	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
RvVAT039_RS05290	PF17674	HHH domain
RvVAT039_RS05290	PF00575	S1 RNA binding domain
RvVAT039_RS05290	PF09371	Tex-like protein N-terminal domain
RvVAT039_RS05290	PF16921	Tex protein YqgF-like domain
RvVAT039_RS05300	PF01040	UbiA prenyltransferase family
RvVAT039_RS05305	PF02583	Metal-sensitive transcriptional repressor
RvVAT039_RS05330	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS05335	PF03459	TOBE domain
RvVAT039_RS05335	PF00005	ABC transporter
RvVAT039_RS05340	PF03459	TOBE domain
RvVAT039_RS05340	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS05345	PF02913	FAD linked oxidases, C-terminal domain
RvVAT039_RS05345	PF01565	FAD binding domain 
RvVAT039_RS05350	PF03481	Putative GTP-binding controlling metal-binding
RvVAT039_RS05350	PF01300	Telomere recombination
RvVAT039_RS05360	PF00672	HAMP domain
RvVAT039_RS05360	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS05375	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
RvVAT039_RS05375	PF00355	Rieske [2Fe-2S] domain
RvVAT039_RS05380	PF00175	Oxidoreductase NAD-binding domain 
RvVAT039_RS05380	PF00111	2Fe-2S iron-sulfur cluster binding domain
RvVAT039_RS05380	PF00970	Oxidoreductase FAD-binding domain
RvVAT039_RS05390	PF07886	BA14K-like protein
RvVAT039_RS05400	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
RvVAT039_RS05400	PF02770	Acyl-CoA dehydrogenase, middle domain
RvVAT039_RS05400	PF12806	Acetyl-CoA dehydrogenase C-terminal like
RvVAT039_RS05400	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
RvVAT039_RS05405	PF00378	Enoyl-CoA hydratase/isomerase
RvVAT039_RS05410	PF00672	HAMP domain
RvVAT039_RS05410	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS05410	PF02743	Cache domain
RvVAT039_RS05420	PF05958	tRNA (Uracil-5-)-methyltransferase
RvVAT039_RS05425	PF01479	S4 domain
RvVAT039_RS05425	PF01728	FtsJ-like methyltransferase
RvVAT039_RS05430	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS05430	PF00672	HAMP domain
RvVAT039_RS05435	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS05435	PF00672	HAMP domain
RvVAT039_RS05435	PF02203	Tar ligand binding domain homologue
RvVAT039_RS05440	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
RvVAT039_RS05440	PF02779	Transketolase, pyrimidine binding domain
RvVAT039_RS05440	PF02780	Transketolase, C-terminal domain
RvVAT039_RS05445	PF02609	Exonuclease VII small subunit
RvVAT039_RS05450	PF00850	Histone deacetylase domain
RvVAT039_RS05465	PF02632	BioY family
RvVAT039_RS05470	PF02361	Cobalt transport protein
RvVAT039_RS05475	PF00005	ABC transporter
RvVAT039_RS05480	PF00491	Arginase family
RvVAT039_RS05485	PF06224	Winged helix DNA-binding domain
RvVAT039_RS05505	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
RvVAT039_RS05505	PF00925	GTP cyclohydrolase II
RvVAT039_RS05510	PF01264	Chorismate synthase
RvVAT039_RS05515	PF13188	PAS domain
RvVAT039_RS05515	PF03707	Bacterial signalling protein N terminal repeat
RvVAT039_RS05515	PF00563	EAL domain
RvVAT039_RS05515	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS05525	PF00300	Histidine phosphatase superfamily (branch 1)
RvVAT039_RS05535	PF00226	DnaJ domain
RvVAT039_RS05535	PF01556	DnaJ C terminal domain
RvVAT039_RS05535	PF00684	DnaJ central domain
RvVAT039_RS05545	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
RvVAT039_RS05545	PF01243	Pyridoxamine 5'-phosphate oxidase
RvVAT039_RS05555	PF07690	Major Facilitator Superfamily
RvVAT039_RS05560	PF00376	MerR family regulatory protein
RvVAT039_RS05560	PF09278	MerR, DNA binding
RvVAT039_RS05565	PF07943	Penicillin-binding protein 5, C-terminal domain
RvVAT039_RS05565	PF00768	D-alanyl-D-alanine carboxypeptidase
RvVAT039_RS05580	PF13419	Haloacid dehalogenase-like hydrolase
RvVAT039_RS05590	PF01523	Putative modulator of DNA gyrase
RvVAT039_RS05600	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
RvVAT039_RS05600	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
RvVAT039_RS05605	PF00115	Cytochrome C and Quinol oxidase polypeptide I
RvVAT039_RS05610	PF01040	UbiA prenyltransferase family
RvVAT039_RS05620	PF04442	Cytochrome c oxidase assembly protein CtaG/Cox11
RvVAT039_RS05625	PF00510	Cytochrome c oxidase subunit III
RvVAT039_RS05635	PF02104	SURF1 family
RvVAT039_RS05645	PF02401	LytB protein
RvVAT039_RS05650	PF00905	Penicillin binding protein transpeptidase domain
RvVAT039_RS05655	PF01636	Phosphotransferase enzyme family
RvVAT039_RS05660	PF00075	RNase H
RvVAT039_RS05670	PF01297	Zinc-uptake complex component A periplasmic
RvVAT039_RS05675	PF00950	ABC 3 transport family
RvVAT039_RS05680	PF00005	ABC transporter
RvVAT039_RS05685	PF00462	Glutaredoxin
RvVAT039_RS05685	PF08534	Redoxin
RvVAT039_RS05695	PF02622	Uncharacterized ACR, COG1678
RvVAT039_RS05710	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS05710	PF08447	PAS fold
RvVAT039_RS05710	PF08448	PAS fold
RvVAT039_RS05710	PF00563	EAL domain
RvVAT039_RS05715	PF13302	Acetyltransferase (GNAT) domain
RvVAT039_RS05720	PF05193	Peptidase M16 inactive domain
RvVAT039_RS05720	PF00675	Insulinase (Peptidase family M16)
RvVAT039_RS05725	PF14821	Threonine synthase N terminus
RvVAT039_RS05725	PF00291	Pyridoxal-phosphate dependent enzyme
RvVAT039_RS05735	PF00781	Diacylglycerol kinase catalytic domain
RvVAT039_RS05740	PF13419	Haloacid dehalogenase-like hydrolase
RvVAT039_RS05745	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS05745	PF07729	FCD domain
RvVAT039_RS05755	PF18755	Restriction Enzyme Adenine Methylase Associated
RvVAT039_RS05755	PF01555	DNA methylase
RvVAT039_RS05785	PF14815	NUDIX domain
RvVAT039_RS05785	PF00730	HhH-GPD superfamily base excision DNA repair protein
RvVAT039_RS05800	PF02463	RecF/RecN/SMC N terminal domain
RvVAT039_RS05815	PF07690	Major Facilitator Superfamily
RvVAT039_RS05830	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
RvVAT039_RS05830	PF02896	PEP-utilising enzyme, TIM barrel domain
RvVAT039_RS05830	PF00391	PEP-utilising enzyme, mobile domain
RvVAT039_RS05845	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS05845	PF03466	LysR substrate binding domain
RvVAT039_RS05855	PF01810	LysE type translocator
RvVAT039_RS05865	PF00529	HlyD membrane-fusion protein of T1SS
RvVAT039_RS05865	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
RvVAT039_RS05870	PF00664	ABC transporter transmembrane region
RvVAT039_RS05870	PF00005	ABC transporter
RvVAT039_RS05885	PF02203	Tar ligand binding domain homologue
RvVAT039_RS05885	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS05885	PF00672	HAMP domain
RvVAT039_RS05890	PF01507	Phosphoadenosine phosphosulfate reductase family
RvVAT039_RS05895	PF01507	Phosphoadenosine phosphosulfate reductase family
RvVAT039_RS05900	PF00009	Elongation factor Tu GTP binding domain
RvVAT039_RS05915	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
RvVAT039_RS05915	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
RvVAT039_RS05920	PF00356	Bacterial regulatory proteins, lacI family
RvVAT039_RS05920	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
RvVAT039_RS05940	PF01965	DJ-1/PfpI family
RvVAT039_RS05960	PF00654	Voltage gated chloride channel
RvVAT039_RS05965	PF00700	Bacterial flagellin C-terminal helical region
RvVAT039_RS05965	PF00669	Bacterial flagellin N-terminal helical region
RvVAT039_RS05970	PF00654	Voltage gated chloride channel
RvVAT039_RS05990	PF00732	GMC oxidoreductase
RvVAT039_RS05990	PF05199	GMC oxidoreductase
RvVAT039_RS05995	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS06000	PF13417	Glutathione S-transferase, N-terminal domain
RvVAT039_RS06000	PF00043	Glutathione S-transferase, C-terminal domain
RvVAT039_RS06005	PF00884	Sulfatase
RvVAT039_RS06005	PF12411	Choline sulfatase enzyme C terminal 
RvVAT039_RS06010	PF13977	BetI-type transcriptional repressor, C-terminal
RvVAT039_RS06010	PF00440	Bacterial regulatory proteins, tetR family
RvVAT039_RS06015	PF00563	EAL domain
RvVAT039_RS06015	PF12792	CSS motif domain associated with EAL 
RvVAT039_RS06020	PF02801	Beta-ketoacyl synthase, C-terminal domain
RvVAT039_RS06020	PF00698	Acyl transferase domain
RvVAT039_RS06020	PF08240	Alcohol dehydrogenase GroES-like domain
RvVAT039_RS06020	PF14765	Polyketide synthase dehydratase
RvVAT039_RS06020	PF16197	Ketoacyl-synthetase C-terminal extension
RvVAT039_RS06020	PF00550	Phosphopantetheine attachment site
RvVAT039_RS06020	PF08659	KR domain
RvVAT039_RS06020	PF00109	Beta-ketoacyl synthase, N-terminal domain
RvVAT039_RS06020	PF00107	Zinc-binding dehydrogenase
RvVAT039_RS06050	PF08220	DeoR-like helix-turn-helix domain
RvVAT039_RS06050	PF00455	DeoR C terminal sensor domain
RvVAT039_RS06070	PF08019	Phosphoethanolamine transferase EptA/EptB
RvVAT039_RS06070	PF00884	Sulfatase
RvVAT039_RS06100	PF07690	Major Facilitator Superfamily
RvVAT039_RS06110	PF00881	Nitroreductase family
RvVAT039_RS06135	PF01476	LysM domain
RvVAT039_RS06135	PF03734	L,D-transpeptidase catalytic domain
RvVAT039_RS06135	PF17969	L,D-transpeptidase C-terminal domain
RvVAT039_RS06140	PF03734	L,D-transpeptidase catalytic domain
RvVAT039_RS06140	PF17969	L,D-transpeptidase C-terminal domain
RvVAT039_RS06145	PF01047	MarR family
RvVAT039_RS06150	PF02566	OsmC-like protein
RvVAT039_RS06160	PF13426	PAS domain
RvVAT039_RS06160	PF07568	Histidine kinase
RvVAT039_RS06160	PF13581	Histidine kinase-like ATPase domain
RvVAT039_RS06165	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS06165	PF13426	PAS domain
RvVAT039_RS06165	PF00072	Response regulator receiver domain
RvVAT039_RS06180	PF00156	Phosphoribosyl transferase domain
RvVAT039_RS06185	PF02203	Tar ligand binding domain homologue
RvVAT039_RS06185	PF00672	HAMP domain
RvVAT039_RS06185	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS06190	PF00672	HAMP domain
RvVAT039_RS06190	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS06190	PF02203	Tar ligand binding domain homologue
RvVAT039_RS06200	PF05872	Bacterial protein of unknown function (DUF853)
RvVAT039_RS06215	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS06215	PF00672	HAMP domain
RvVAT039_RS06220	PF02673	Bacitracin resistance protein BacA
RvVAT039_RS06225	PF00005	ABC transporter
RvVAT039_RS06230	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS06235	PF13407	Periplasmic binding protein domain
RvVAT039_RS06240	PF01047	MarR family
RvVAT039_RS06240	PF00480	ROK family
RvVAT039_RS06260	PF00005	ABC transporter
RvVAT039_RS06265	PF01032	FecCD transport family
RvVAT039_RS06280	PF01209	ubiE/COQ5 methyltransferase family
RvVAT039_RS06300	PF00293	NUDIX domain
RvVAT039_RS06300	PF13344	Haloacid dehalogenase-like hydrolase
RvVAT039_RS06305	PF00034	Cytochrome c
RvVAT039_RS06310	PF01322	Cytochrome C'
RvVAT039_RS06325	PF13302	Acetyltransferase (GNAT) domain
RvVAT039_RS06330	PF02525	Flavodoxin-like fold
RvVAT039_RS06335	PF01638	HxlR-like helix-turn-helix
RvVAT039_RS06345	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
RvVAT039_RS06345	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
RvVAT039_RS06350	PF03692	Putative zinc- or iron-chelating domain
RvVAT039_RS06360	PF08447	PAS fold
RvVAT039_RS06360	PF08448	PAS fold
RvVAT039_RS06360	PF13426	PAS domain
RvVAT039_RS06360	PF05231	MASE1
RvVAT039_RS06360	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS06360	PF00563	EAL domain
RvVAT039_RS06365	PF01063	Amino-transferase class IV
RvVAT039_RS06370	PF07731	Multicopper oxidase
RvVAT039_RS06370	PF07732	Multicopper oxidase
RvVAT039_RS06380	PF00326	Prolyl oligopeptidase family
RvVAT039_RS06380	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
RvVAT039_RS06405	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
RvVAT039_RS06410	PF00582	Universal stress protein family
RvVAT039_RS06420	PF01124	MAPEG family
RvVAT039_RS06425	PF03006	Haemolysin-III related
RvVAT039_RS06430	PF00027	Cyclic nucleotide-binding domain
RvVAT039_RS06430	PF00325	Bacterial regulatory proteins, crp family
RvVAT039_RS06450	PF05443	ROS/MUCR transcriptional regulator protein
RvVAT039_RS06455	PF03334	Na+/H+ antiporter subunit
RvVAT039_RS06460	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
RvVAT039_RS06465	PF01899	Na+/H+ ion antiporter subunit
RvVAT039_RS06475	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
RvVAT039_RS06480	PF04039	Domain related to MnhB subunit of Na+/H+ antiporter
RvVAT039_RS06490	PF01641	SelR domain
RvVAT039_RS06510	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
RvVAT039_RS06515	PF12704	MacB-like periplasmic core domain
RvVAT039_RS06515	PF00005	ABC transporter
RvVAT039_RS06515	PF02687	FtsX-like permease family
RvVAT039_RS06525	PF09209	Tetracyclin repressor-like, C-terminal domain
RvVAT039_RS06525	PF00440	Bacterial regulatory proteins, tetR family
RvVAT039_RS06530	PF02657	Fe-S metabolism associated domain
RvVAT039_RS06540	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS06540	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS06555	PF00873	AcrB/AcrD/AcrF family
RvVAT039_RS06565	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
RvVAT039_RS06620	PF00905	Penicillin binding protein transpeptidase domain
RvVAT039_RS06620	PF00912	Transglycosylase
RvVAT039_RS06625	PF03692	Putative zinc- or iron-chelating domain
RvVAT039_RS06635	PF00376	MerR family regulatory protein
RvVAT039_RS06635	PF09278	MerR, DNA binding
RvVAT039_RS06660	PF04860	Phage portal protein
RvVAT039_RS06750	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS06750	PF00072	Response regulator receiver domain
RvVAT039_RS06755	PF00672	HAMP domain
RvVAT039_RS06755	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS06755	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS06760	PF16998	17 kDa outer membrane surface antigen
RvVAT039_RS06760	PF05433	Glycine zipper 2TM domain
RvVAT039_RS06770	PF03100	CcmE
RvVAT039_RS06775	PF01578	Cytochrome C assembly protein
RvVAT039_RS06775	PF16327	Cytochrome c-type biogenesis protein CcmF C-terminal
RvVAT039_RS06780	PF03918	Cytochrome C biogenesis protein
RvVAT039_RS06790	PF13180	PDZ domain
RvVAT039_RS06795	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS06795	PF00072	Response regulator receiver domain
RvVAT039_RS06800	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS06800	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS06800	PF00672	HAMP domain
RvVAT039_RS06805	PF03710	Glutamate-ammonia ligase adenylyltransferase
RvVAT039_RS06805	PF08335	GlnD PII-uridylyltransferase
RvVAT039_RS06810	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS06810	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS06810	PF00989	PAS fold
RvVAT039_RS06815	PF17432	Domain of unknown function (DUF3458_C) ARM repeats
RvVAT039_RS06815	PF11940	Domain of unknown function (DUF3458) Ig-like fold
RvVAT039_RS06815	PF01433	Peptidase family M1 domain
RvVAT039_RS06820	PF17202	Single cache domain 3
RvVAT039_RS06820	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS06820	PF00672	HAMP domain
RvVAT039_RS06855	PF00012	Hsp70 protein
RvVAT039_RS06865	PF00873	AcrB/AcrD/AcrF family
RvVAT039_RS06870	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
RvVAT039_RS06885	PF01063	Amino-transferase class IV
RvVAT039_RS06895	PF03448	MgtE intracellular N domain
RvVAT039_RS06895	PF01769	Divalent cation transporter
RvVAT039_RS06895	PF00571	CBS domain
RvVAT039_RS06900	PF07690	Major Facilitator Superfamily
RvVAT039_RS06905	PF00781	Diacylglycerol kinase catalytic domain
RvVAT039_RS06910	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS06910	PF00005	ABC transporter
RvVAT039_RS06915	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS06915	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS06920	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS06925	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS06930	PF00120	Glutamine synthetase, catalytic domain
RvVAT039_RS06935	PF00202	Aminotransferase class-III
RvVAT039_RS06945	PF03551	Transcriptional regulator PadR-like family
RvVAT039_RS06950	PF13231	Dolichyl-phosphate-mannose-protein mannosyltransferase
RvVAT039_RS06955	PF00535	Glycosyl transferase family 2
RvVAT039_RS06965	PF10423	Bacterial AMP nucleoside phosphorylase N-terminus 
RvVAT039_RS06965	PF01048	Phosphorylase superfamily
RvVAT039_RS06975	PF00043	Glutathione S-transferase, C-terminal domain
RvVAT039_RS06975	PF02798	Glutathione S-transferase, N-terminal domain
RvVAT039_RS06990	PF00155	Aminotransferase class I and II
RvVAT039_RS07005	PF14759	Reductase C-terminal
RvVAT039_RS07005	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RvVAT039_RS07010	PF02530	Porin subfamily
RvVAT039_RS07015	PF02530	Porin subfamily
RvVAT039_RS07030	PF14718	Soluble lytic murein transglycosylase L domain
RvVAT039_RS07030	PF01464	Transglycosylase SLT domain
RvVAT039_RS07035	PF00701	Dihydrodipicolinate synthetase family
RvVAT039_RS07040	PF01668	SmpB protein
RvVAT039_RS07050	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
RvVAT039_RS07050	PF02805	Metal binding domain of Ada
RvVAT039_RS07050	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
RvVAT039_RS07050	PF12833	Helix-turn-helix domain
RvVAT039_RS07055	PF00672	HAMP domain
RvVAT039_RS07055	PF02203	Tar ligand binding domain homologue
RvVAT039_RS07055	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS07065	PF01192	RNA polymerase Rpb6 
RvVAT039_RS07070	PF13291	ACT domain
RvVAT039_RS07070	PF04607	Region found in RelA / SpoT proteins
RvVAT039_RS07070	PF02824	TGS domain
RvVAT039_RS07080	PF10502	Signal peptidase, peptidase S26 
RvVAT039_RS07085	PF14622	Ribonuclease-III-like
RvVAT039_RS07085	PF00035	Double-stranded RNA binding motif
RvVAT039_RS07090	PF01926	50S ribosome-binding GTPase
RvVAT039_RS07090	PF07650	KH domain
RvVAT039_RS07095	PF05145	Transition state regulatory protein AbrB
RvVAT039_RS07100	PF11967	Recombination protein O N terminal
RvVAT039_RS07100	PF02565	Recombination protein O C terminal
RvVAT039_RS07115	PF01966	HD domain
RvVAT039_RS07130	PF01966	HD domain
RvVAT039_RS07135	PF01571	Aminomethyltransferase folate-binding domain
RvVAT039_RS07155	PF00293	NUDIX domain
RvVAT039_RS07170	PF01066	CDP-alcohol phosphatidyltransferase
RvVAT039_RS07175	PF02666	Phosphatidylserine decarboxylase
RvVAT039_RS07180	PF00005	ABC transporter
RvVAT039_RS07180	PF00664	ABC transporter transmembrane region
RvVAT039_RS07185	PF04972	BON domain
RvVAT039_RS07185	PF01476	LysM domain
RvVAT039_RS07190	PF03641	Possible lysine decarboxylase
RvVAT039_RS07195	PF00892	EamA-like transporter family
RvVAT039_RS07200	PF08502	LeuA allosteric (dimerisation) domain
RvVAT039_RS07200	PF00682	HMGL-like
RvVAT039_RS07205	PF00561	alpha/beta hydrolase fold
RvVAT039_RS07225	PF01850	PIN domain
RvVAT039_RS07230	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
RvVAT039_RS07235	PF01406	tRNA synthetases class I (C) catalytic domain
RvVAT039_RS07240	PF00295	Glycosyl hydrolases family 28
RvVAT039_RS07245	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
RvVAT039_RS07250	PF16363	GDP-mannose 4,6 dehydratase
RvVAT039_RS07255	PF04321	RmlD substrate binding domain
RvVAT039_RS07260	PF00483	Nucleotidyl transferase
RvVAT039_RS07265	PF00535	Glycosyl transferase family 2
RvVAT039_RS07265	PF00534	Glycosyl transferases group 1
RvVAT039_RS07275	PF00106	short chain dehydrogenase
RvVAT039_RS07280	PF13537	Glutamine amidotransferase domain
RvVAT039_RS07280	PF00156	Phosphoribosyl transferase domain
RvVAT039_RS07285	PF02674	Colicin V production protein
RvVAT039_RS07290	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
RvVAT039_RS07290	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
RvVAT039_RS07290	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
RvVAT039_RS07295	PF16363	GDP-mannose 4,6 dehydratase
RvVAT039_RS07300	PF16363	GDP-mannose 4,6 dehydratase
RvVAT039_RS07305	PF06745	KaiC
RvVAT039_RS07305	PF18073	Rubredoxin metal binding domain
RvVAT039_RS07310	PF00842	Alanine racemase, C-terminal domain
RvVAT039_RS07310	PF01168	Alanine racemase, N-terminal domain
RvVAT039_RS07320	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS07325	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS07330	PF00497	Bacterial extracellular solute-binding proteins, family 3
RvVAT039_RS07335	PF03796	DnaB-like helicase C terminal domain
RvVAT039_RS07335	PF00772	DnaB-like helicase N terminal domain
RvVAT039_RS07340	PF03948	Ribosomal protein L9, C-terminal domain
RvVAT039_RS07340	PF01281	Ribosomal protein L9, N-terminal domain
RvVAT039_RS07350	PF01084	Ribosomal protein S18
RvVAT039_RS07355	PF01250	Ribosomal protein S6
RvVAT039_RS07365	PF02868	Thermolysin metallopeptidase, alpha-helical domain
RvVAT039_RS07365	PF01447	Thermolysin metallopeptidase, catalytic domain
RvVAT039_RS07365	PF16485	Protealysin propeptide
RvVAT039_RS07375	PF00248	Aldo/keto reductase family
RvVAT039_RS07380	PF00698	Acyl transferase domain
RvVAT039_RS07390	PF00550	Phosphopantetheine attachment site
RvVAT039_RS07395	PF00109	Beta-ketoacyl synthase, N-terminal domain
RvVAT039_RS07395	PF02801	Beta-ketoacyl synthase, C-terminal domain
RvVAT039_RS07400	PF02618	YceG-like family
RvVAT039_RS07405	PF08340	Domain of unknown function (DUF1732)
RvVAT039_RS07405	PF03755	YicC-like family, N-terminal region 
RvVAT039_RS07410	PF00625	Guanylate kinase
RvVAT039_RS07415	PF08242	Methyltransferase domain
RvVAT039_RS07420	PF00398	Ribosomal RNA adenine dimethylase
RvVAT039_RS07425	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
RvVAT039_RS07435	PF03968	OstA-like protein
RvVAT039_RS07435	PF04453	LPS transport system D
RvVAT039_RS07450	PF01569	PAP2 superfamily
RvVAT039_RS07455	PF00883	Cytosol aminopeptidase family, catalytic domain
RvVAT039_RS07455	PF02789	Cytosol aminopeptidase family, N-terminal domain
RvVAT039_RS07465	PF02203	Tar ligand binding domain homologue
RvVAT039_RS07465	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS07465	PF00672	HAMP domain
RvVAT039_RS07470	PF00005	ABC transporter
RvVAT039_RS07470	PF12848	ABC transporter
RvVAT039_RS07475	PF13417	Glutathione S-transferase, N-terminal domain
RvVAT039_RS07480	PF00334	Nucleoside diphosphate kinase
RvVAT039_RS07485	PF02391	MoaE protein
RvVAT039_RS07495	PF01066	CDP-alcohol phosphatidyltransferase
RvVAT039_RS07500	PF08459	UvrC Helix-hairpin-helix N-terminal
RvVAT039_RS07500	PF12826	Helix-hairpin-helix motif
RvVAT039_RS07500	PF02151	UvrB/uvrC motif
RvVAT039_RS07500	PF01541	GIY-YIG catalytic domain
RvVAT039_RS07510	PF13505	Outer membrane protein beta-barrel domain
RvVAT039_RS07515	PF00043	Glutathione S-transferase, C-terminal domain
RvVAT039_RS07515	PF13417	Glutathione S-transferase, N-terminal domain
RvVAT039_RS07520	PF04378	Ribosomal RNA large subunit methyltransferase D, RlmJ
RvVAT039_RS07525	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
RvVAT039_RS07525	PF00384	Molybdopterin oxidoreductase
RvVAT039_RS07525	PF01568	Molydopterin dinucleotide binding domain
RvVAT039_RS07530	PF00293	NUDIX domain
RvVAT039_RS07535	PF00753	Metallo-beta-lactamase superfamily
RvVAT039_RS07535	PF04273	Putative phosphatase (DUF442)
RvVAT039_RS07545	PF04143	Sulphur transport
RvVAT039_RS07555	PF01925	Sulfite exporter TauE/SafE
RvVAT039_RS07560	PF00551	Formyl transferase
RvVAT039_RS07565	PF02769	AIR synthase related protein, C-terminal domain
RvVAT039_RS07565	PF00586	AIR synthase related protein, N-terminal domain
RvVAT039_RS07570	PF01594	AI-2E family transporter
RvVAT039_RS07580	PF02503	Polyphosphate kinase middle domain
RvVAT039_RS07580	PF13090	Polyphosphate kinase C-terminal domain 2
RvVAT039_RS07580	PF13089	Polyphosphate kinase N-terminal domain
RvVAT039_RS07580	PF17941	Polyphosphate kinase C-terminal domain 1
RvVAT039_RS07585	PF02541	Ppx/GppA phosphatase family
RvVAT039_RS07590	PF02742	Iron dependent repressor, metal binding and dimerisation domain
RvVAT039_RS07590	PF01325	Iron dependent repressor, N-terminal DNA binding domain
RvVAT039_RS07595	PF01566	Natural resistance-associated macrophage protein
RvVAT039_RS07615	PF01612	3'-5' exonuclease
RvVAT039_RS07615	PF00570	HRDC domain
RvVAT039_RS07630	PF02938	GAD domain
RvVAT039_RS07630	PF01336	OB-fold nucleic acid binding domain
RvVAT039_RS07630	PF00152	tRNA synthetases class II (D, K and N) 
RvVAT039_RS07645	PF03989	DNA gyrase C-terminal domain, beta-propeller
RvVAT039_RS07645	PF00521	DNA gyrase/topoisomerase IV, subunit A
RvVAT039_RS07650	PF00563	EAL domain
RvVAT039_RS07650	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS07650	PF03707	Bacterial signalling protein N terminal repeat
RvVAT039_RS07650	PF13188	PAS domain
RvVAT039_RS07660	PF00563	EAL domain
RvVAT039_RS07660	PF01590	GAF domain
RvVAT039_RS07660	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS07660	PF00989	PAS fold
RvVAT039_RS07665	PF04377	Arginine-tRNA-protein transferase, C terminus
RvVAT039_RS07665	PF04376	Arginine-tRNA-protein transferase, N terminus
RvVAT039_RS07675	PF00490	Delta-aminolevulinic acid dehydratase
RvVAT039_RS07695	PF00464	Serine hydroxymethyltransferase
RvVAT039_RS07700	PF03477	ATP cone domain
RvVAT039_RS07705	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
RvVAT039_RS07705	PF01872	RibD C-terminal domain
RvVAT039_RS07710	PF00677	Lumazine binding domain
RvVAT039_RS07730	PF00885	6,7-dimethyl-8-ribityllumazine synthase
RvVAT039_RS07735	PF01029	NusB family
RvVAT039_RS07740	PF07690	Major Facilitator Superfamily
RvVAT039_RS07745	PF03030	Inorganic H+ pyrophosphatase
RvVAT039_RS07765	PF02504	Fatty acid synthesis protein
RvVAT039_RS07770	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
RvVAT039_RS07770	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
RvVAT039_RS07775	PF00216	Bacterial DNA-binding protein
RvVAT039_RS07780	PF13411	MerR HTH family regulatory protein
RvVAT039_RS07800	PF00589	Phage integrase family
RvVAT039_RS07810	PF05488	PAAR motif
RvVAT039_RS07810	PF05593	RHS Repeat
RvVAT039_RS07835	PF05593	RHS Repeat
RvVAT039_RS07835	PF03527	RHS protein
RvVAT039_RS07855	PF04717	Type VI secretion system, phage-baseplate injector
RvVAT039_RS07895	PF07733	Bacterial DNA polymerase III alpha NTPase domain
RvVAT039_RS07895	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
RvVAT039_RS07895	PF14579	Helix-hairpin-helix motif
RvVAT039_RS07895	PF02811	PHP domain
RvVAT039_RS07925	PF02397	Bacterial sugar transferase
RvVAT039_RS07930	PF00534	Glycosyl transferases group 1
RvVAT039_RS07940	PF02706	Chain length determinant protein
RvVAT039_RS07955	PF02628	Cytochrome oxidase assembly protein
RvVAT039_RS07960	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
RvVAT039_RS07965	PF04655	Aminoglycoside/hydroxyurea antibiotic resistance kinase
RvVAT039_RS07970	PF01118	Semialdehyde dehydrogenase, NAD binding domain
RvVAT039_RS07975	PF00491	Arginase family
RvVAT039_RS07995	PF00380	Ribosomal protein S9/S16
RvVAT039_RS08000	PF00572	Ribosomal protein L13
RvVAT039_RS08005	PF13380	CoA binding domain
RvVAT039_RS08015	PF13380	CoA binding domain
RvVAT039_RS08020	PF01053	Cys/Met metabolism PLP-dependent enzyme
RvVAT039_RS08025	PF10518	TAT (twin-arginine translocation) pathway signal sequence
RvVAT039_RS08025	PF00149	Calcineurin-like phosphoesterase
RvVAT039_RS08035	PF00067	Cytochrome P450
RvVAT039_RS08040	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS08040	PF17151	Periplasmic sensor domain
RvVAT039_RS08045	PF00574	Clp protease
RvVAT039_RS08050	PF07724	AAA domain (Cdc48 subfamily)
RvVAT039_RS08050	PF06689	ClpX C4-type zinc finger
RvVAT039_RS08050	PF10431	C-terminal, D2-small domain, of ClpB protein 
RvVAT039_RS08055	PF00004	ATPase family associated with various cellular activities (AAA)
RvVAT039_RS08055	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
RvVAT039_RS08055	PF05362	Lon protease (S16) C-terminal proteolytic domain
RvVAT039_RS08060	PF00216	Bacterial DNA-binding protein
RvVAT039_RS08075	PF01047	MarR family
RvVAT039_RS08080	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS08080	PF00501	AMP-binding enzyme
RvVAT039_RS08085	PF00378	Enoyl-CoA hydratase/isomerase
RvVAT039_RS08105	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
RvVAT039_RS08110	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
RvVAT039_RS08115	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
RvVAT039_RS08120	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
RvVAT039_RS08135	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
RvVAT039_RS08135	PF10531	SLBB domain
RvVAT039_RS08135	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
RvVAT039_RS08145	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
RvVAT039_RS08145	PF00384	Molybdopterin oxidoreductase
RvVAT039_RS08145	PF09326	NADH-ubiquinone oxidoreductase subunit G, C-terminal
RvVAT039_RS08150	PF00146	NADH dehydrogenase
RvVAT039_RS08155	PF12838	4Fe-4S dicluster domain
RvVAT039_RS08160	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
RvVAT039_RS08165	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
RvVAT039_RS08170	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
RvVAT039_RS08170	PF00361	Proton-conducting membrane transporter
RvVAT039_RS08175	PF00361	Proton-conducting membrane transporter
RvVAT039_RS08175	PF01059	NADH-ubiquinone oxidoreductase chain 4, amino terminus
RvVAT039_RS08180	PF00361	Proton-conducting membrane transporter
RvVAT039_RS08185	PF03099	Biotin/lipoate A/B protein ligase family
RvVAT039_RS08185	PF02237	Biotin protein ligase C terminal domain
RvVAT039_RS08185	PF03309	Type III pantothenate kinase
RvVAT039_RS08190	PF12706	Beta-lactamase superfamily domain
RvVAT039_RS08190	PF17770	Ribonuclease J C-terminal domain
RvVAT039_RS08190	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
RvVAT039_RS08200	PF01042	Endoribonuclease L-PSP
RvVAT039_RS08215	PF03129	Anticodon binding domain
RvVAT039_RS08215	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
RvVAT039_RS08220	PF02687	FtsX-like permease family
RvVAT039_RS08220	PF12704	MacB-like periplasmic core domain
RvVAT039_RS08225	PF00005	ABC transporter
RvVAT039_RS08230	PF02811	PHP domain
RvVAT039_RS08230	PF07733	Bacterial DNA polymerase III alpha NTPase domain
RvVAT039_RS08230	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
RvVAT039_RS08230	PF14579	Helix-hairpin-helix motif
RvVAT039_RS08240	PF11799	impB/mucB/samB family C-terminal domain
RvVAT039_RS08240	PF00817	impB/mucB/samB family
RvVAT039_RS08255	PF00072	Response regulator receiver domain
RvVAT039_RS08260	PF00072	Response regulator receiver domain
RvVAT039_RS08260	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS08265	PF00471	Ribosomal protein L33
RvVAT039_RS08270	PF07690	Major Facilitator Superfamily
RvVAT039_RS08280	PF08206	Ribonuclease B OB domain
RvVAT039_RS08280	PF08461	Ribonuclease R winged-helix domain
RvVAT039_RS08280	PF00773	RNB domain
RvVAT039_RS08280	PF00575	S1 RNA binding domain
RvVAT039_RS08280	PF17876	Cold shock domain
RvVAT039_RS08285	PF01751	Toprim domain
RvVAT039_RS08285	PF13368	Topoisomerase C-terminal repeat
RvVAT039_RS08285	PF01131	DNA topoisomerase
RvVAT039_RS08285	PF01396	Topoisomerase DNA binding C4 zinc finger
RvVAT039_RS08295	PF02481	DNA recombination-mediator protein A
RvVAT039_RS08295	PF17782	DprA winged helix domain
RvVAT039_RS08300	PF02660	Glycerol-3-phosphate acyltransferase
RvVAT039_RS08305	PF01979	Amidohydrolase family
RvVAT039_RS08310	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
RvVAT039_RS08310	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
RvVAT039_RS08315	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
RvVAT039_RS08315	PF02770	Acyl-CoA dehydrogenase, middle domain
RvVAT039_RS08315	PF18158	Adaptive response protein AidB N-terminal domain
RvVAT039_RS08320	PF00583	Acetyltransferase (GNAT) family
RvVAT039_RS08335	PF03652	Holliday junction resolvase
RvVAT039_RS08345	PF02686	Glu-tRNAGln amidotransferase C subunit
RvVAT039_RS08350	PF01425	Amidase
RvVAT039_RS08365	PF13231	Dolichyl-phosphate-mannose-protein mannosyltransferase
RvVAT039_RS08370	PF02684	Lipid-A-disaccharide synthetase
RvVAT039_RS08370	PF07578	Lipid A Biosynthesis N-terminal domain
RvVAT039_RS08375	PF00535	Glycosyl transferase family 2
RvVAT039_RS08380	PF02934	GatB/GatE catalytic domain
RvVAT039_RS08380	PF02637	GatB domain
RvVAT039_RS08400	PF09923	Uncharacterized protein conserved in bacteria (DUF2155)
RvVAT039_RS08405	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
RvVAT039_RS08410	PF02785	Biotin carboxylase C-terminal domain
RvVAT039_RS08410	PF00289	Biotin carboxylase, N-terminal domain
RvVAT039_RS08410	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
RvVAT039_RS08415	PF00364	Biotin-requiring enzyme
RvVAT039_RS08420	PF01220	Dehydroquinase class II
RvVAT039_RS08425	PF13462	Thioredoxin
RvVAT039_RS08430	PF00155	Aminotransferase class I and II
RvVAT039_RS08440	PF00575	S1 RNA binding domain
RvVAT039_RS08440	PF10150	Ribonuclease E/G family
RvVAT039_RS08440	PF12111	Polyribonucleotide phosphorylase C terminal
RvVAT039_RS08450	PF11741	AMIN domain
RvVAT039_RS08450	PF01520	N-acetylmuramoyl-L-alanine amidase
RvVAT039_RS08455	PF00905	Penicillin binding protein transpeptidase domain
RvVAT039_RS08455	PF00912	Transglycosylase
RvVAT039_RS08455	PF17092	Penicillin-binding protein OB-like domain
RvVAT039_RS08465	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
RvVAT039_RS08475	PF01513	ATP-NAD kinase
RvVAT039_RS08495	PF08032	RNA 2'-O ribose methyltransferase substrate binding
RvVAT039_RS08495	PF00588	SpoU rRNA Methylase family
RvVAT039_RS08510	PF03143	Elongation factor Tu C-terminal domain
RvVAT039_RS08510	PF00009	Elongation factor Tu GTP binding domain
RvVAT039_RS08510	PF03144	Elongation factor Tu domain 2
RvVAT039_RS08535	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
RvVAT039_RS08540	PF00467	KOW motif
RvVAT039_RS08540	PF02357	Transcription termination factor nusG
RvVAT039_RS08545	PF00298	Ribosomal protein L11, RNA binding domain
RvVAT039_RS08545	PF03946	Ribosomal protein L11, N-terminal domain
RvVAT039_RS08550	PF00687	Ribosomal protein L1p/L10e family
RvVAT039_RS08555	PF00466	Ribosomal protein L10
RvVAT039_RS08560	PF00542	Ribosomal protein L7/L12 C-terminal domain
RvVAT039_RS08560	PF16320	Ribosomal protein L7/L12 dimerisation domain
RvVAT039_RS08565	PF04561	RNA polymerase Rpb2, domain 2
RvVAT039_RS08565	PF04565	RNA polymerase Rpb2, domain 3
RvVAT039_RS08565	PF04560	RNA polymerase Rpb2, domain 7
RvVAT039_RS08565	PF00562	RNA polymerase Rpb2, domain 6
RvVAT039_RS08565	PF10385	RNA polymerase beta subunit external 1 domain
RvVAT039_RS08565	PF04563	RNA polymerase beta subunit
RvVAT039_RS08570	PF04998	RNA polymerase Rpb1, domain 5
RvVAT039_RS08570	PF05000	RNA polymerase Rpb1, domain 4
RvVAT039_RS08570	PF04983	RNA polymerase Rpb1, domain 3
RvVAT039_RS08570	PF00623	RNA polymerase Rpb1, domain 2
RvVAT039_RS08570	PF04997	RNA polymerase Rpb1, domain 1
RvVAT039_RS08585	PF00164	Ribosomal protein S12/S23
RvVAT039_RS08590	PF00177	Ribosomal protein S7p/S5e
RvVAT039_RS08595	PF00009	Elongation factor Tu GTP binding domain
RvVAT039_RS08595	PF03764	Elongation factor G, domain IV
RvVAT039_RS08595	PF14492	Elongation Factor G, domain II
RvVAT039_RS08595	PF03144	Elongation factor Tu domain 2
RvVAT039_RS08595	PF00679	Elongation factor G C-terminus
RvVAT039_RS08600	PF03143	Elongation factor Tu C-terminal domain
RvVAT039_RS08600	PF03144	Elongation factor Tu domain 2
RvVAT039_RS08600	PF00009	Elongation factor Tu GTP binding domain
RvVAT039_RS08605	PF00338	Ribosomal protein S10p/S20e
RvVAT039_RS08610	PF00297	Ribosomal protein L3
RvVAT039_RS08615	PF00573	Ribosomal protein L4/L1 family
RvVAT039_RS08620	PF00276	Ribosomal protein L23
RvVAT039_RS08625	PF03947	Ribosomal Proteins L2, C-terminal domain
RvVAT039_RS08625	PF00181	Ribosomal Proteins L2, RNA binding domain
RvVAT039_RS08630	PF00203	Ribosomal protein S19
RvVAT039_RS08635	PF00237	Ribosomal protein L22p/L17e
RvVAT039_RS08640	PF07650	KH domain
RvVAT039_RS08640	PF00189	Ribosomal protein S3, C-terminal domain
RvVAT039_RS08645	PF00252	Ribosomal protein L16p/L10e
RvVAT039_RS08650	PF00831	Ribosomal L29 protein
RvVAT039_RS08655	PF00366	Ribosomal protein S17
RvVAT039_RS08660	PF00238	Ribosomal protein L14p/L23e
RvVAT039_RS08665	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
RvVAT039_RS08665	PF00467	KOW motif
RvVAT039_RS08670	PF00673	ribosomal L5P family C-terminus
RvVAT039_RS08670	PF00281	Ribosomal protein L5
RvVAT039_RS08675	PF00253	Ribosomal protein S14p/S29e
RvVAT039_RS08680	PF00410	Ribosomal protein S8
RvVAT039_RS08685	PF00347	Ribosomal protein L6
RvVAT039_RS08690	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
RvVAT039_RS08695	PF00333	Ribosomal protein S5, N-terminal domain
RvVAT039_RS08695	PF03719	Ribosomal protein S5, C-terminal domain
RvVAT039_RS08700	PF00327	Ribosomal protein L30p/L7e
RvVAT039_RS08705	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
RvVAT039_RS08710	PF00344	SecY translocase
RvVAT039_RS08715	PF05191	Adenylate kinase, active site lid
RvVAT039_RS08720	PF00416	Ribosomal protein S13/S18
RvVAT039_RS08725	PF00411	Ribosomal protein S11
RvVAT039_RS08730	PF01000	RNA polymerase Rpb3/RpoA insert domain
RvVAT039_RS08730	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
RvVAT039_RS08730	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
RvVAT039_RS08735	PF01196	Ribosomal protein L17
RvVAT039_RS08750	PF00581	Rhodanese-like domain
RvVAT039_RS08755	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
RvVAT039_RS08755	PF01411	tRNA synthetases class II (A)
RvVAT039_RS08755	PF02272	DHHA1 domain
RvVAT039_RS08760	PF00291	Pyridoxal-phosphate dependent enzyme
RvVAT039_RS08765	PF03441	FAD binding domain of DNA photolyase
RvVAT039_RS08765	PF00875	DNA photolyase
RvVAT039_RS08775	PF08525	Opacity-associated protein A N-terminal motif
RvVAT039_RS08775	PF01476	LysM domain
RvVAT039_RS08775	PF01551	Peptidase family M23
RvVAT039_RS08780	PF04305	Protein of unknown function (DUF455)
RvVAT039_RS08785	PF00578	AhpC/TSA family
RvVAT039_RS08800	PF00765	Autoinducer synthase
RvVAT039_RS08810	PF01515	Phosphate acetyl/butaryl transferase
RvVAT039_RS08810	PF00390	Malic enzyme, N-terminal domain
RvVAT039_RS08810	PF03949	Malic enzyme, NAD binding domain
RvVAT039_RS08820	PF02405	Permease MlaE
RvVAT039_RS08825	PF00005	ABC transporter
RvVAT039_RS08835	PF02470	MlaD protein
RvVAT039_RS08835	PF03886	ABC-type transport auxiliary lipoprotein component
RvVAT039_RS08840	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS08840	PF00155	Aminotransferase class I and II
RvVAT039_RS08865	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
RvVAT039_RS08870	PF01259	SAICAR synthetase
RvVAT039_RS08880	PF07519	Tannase and feruloyl esterase
RvVAT039_RS08885	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS08885	PF07694	5TMR of 5TMR-LYT
RvVAT039_RS08895	PF00180	Isocitrate/isopropylmalate dehydrogenase
RvVAT039_RS08900	PF00588	SpoU rRNA Methylase family
RvVAT039_RS08905	PF01177	Asp/Glu/Hydantoin racemase
RvVAT039_RS08915	PF01595	Cyclin M transmembrane N-terminal domain
RvVAT039_RS08915	PF03471	Transporter associated domain
RvVAT039_RS08915	PF00571	CBS domain
RvVAT039_RS08925	PF13472	GDSL-like Lipase/Acylhydrolase family
RvVAT039_RS08925	PF07859	alpha/beta hydrolase fold
RvVAT039_RS08930	PF07687	Peptidase dimerisation domain
RvVAT039_RS08930	PF01546	Peptidase family M20/M25/M40
RvVAT039_RS08935	PF00484	Carbonic anhydrase
RvVAT039_RS08945	PF03741	Integral membrane protein TerC family
RvVAT039_RS08950	PF01479	S4 domain
RvVAT039_RS08950	PF00163	Ribosomal protein S4/S9 N-terminal domain
RvVAT039_RS08955	PF04960	Glutaminase
RvVAT039_RS08965	PF01171	PP-loop family
RvVAT039_RS08970	PF00459	Inositol monophosphatase family
RvVAT039_RS08975	PF00459	Inositol monophosphatase family
RvVAT039_RS08980	PF07690	Major Facilitator Superfamily
RvVAT039_RS08985	PF00462	Glutaredoxin
RvVAT039_RS09000	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
RvVAT039_RS09000	PF02769	AIR synthase related protein, C-terminal domain
RvVAT039_RS09000	PF00586	AIR synthase related protein, N-terminal domain
RvVAT039_RS09005	PF01556	DnaJ C terminal domain
RvVAT039_RS09005	PF00226	DnaJ domain
RvVAT039_RS09015	PF03099	Biotin/lipoate A/B protein ligase family
RvVAT039_RS09025	PF01695	IstB-like ATP binding protein
RvVAT039_RS09030	PF00665	Integrase core domain
RvVAT039_RS09035	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS09045	PF13847	Methyltransferase domain
RvVAT039_RS09045	PF03551	Transcriptional regulator PadR-like family
RvVAT039_RS09055	PF13439	Glycosyltransferase Family 4
RvVAT039_RS09055	PF00534	Glycosyl transferases group 1
RvVAT039_RS09060	PF16363	GDP-mannose 4,6 dehydratase
RvVAT039_RS09080	PF02654	Cobalamin-5-phosphate synthase
RvVAT039_RS09085	PF02277	Phosphoribosyltransferase
RvVAT039_RS09090	PF01219	Prokaryotic diacylglycerol kinase
RvVAT039_RS09115	PF01327	Polypeptide deformylase
RvVAT039_RS09120	PF13545	Crp-like helix-turn-helix domain
RvVAT039_RS09120	PF00027	Cyclic nucleotide-binding domain
RvVAT039_RS09130	PF04055	Radical SAM superfamily
RvVAT039_RS09135	PF00550	Phosphopantetheine attachment site
RvVAT039_RS09140	PF07977	FabA-like domain
RvVAT039_RS09145	PF02801	Beta-ketoacyl synthase, C-terminal domain
RvVAT039_RS09145	PF00109	Beta-ketoacyl synthase, N-terminal domain
RvVAT039_RS09150	PF00109	Beta-ketoacyl synthase, N-terminal domain
RvVAT039_RS09150	PF02801	Beta-ketoacyl synthase, C-terminal domain
RvVAT039_RS09155	PF00107	Zinc-binding dehydrogenase
RvVAT039_RS09155	PF08240	Alcohol dehydrogenase GroES-like domain
RvVAT039_RS09170	PF00795	Carbon-nitrogen hydrolase
RvVAT039_RS09170	PF02540	NAD synthase
RvVAT039_RS09175	PF07676	WD40-like Beta Propeller Repeat
RvVAT039_RS09180	PF00881	Nitroreductase family
RvVAT039_RS09185	PF00551	Formyl transferase
RvVAT039_RS09190	PF00579	tRNA synthetases class I (W and Y)
RvVAT039_RS09195	PF03702	Anhydro-N-acetylmuramic acid kinase
RvVAT039_RS09215	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS09215	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS09215	PF00989	PAS fold
RvVAT039_RS09225	PF03167	Uracil DNA glycosylase superfamily
RvVAT039_RS09230	PF13404	AsnC-type helix-turn-helix domain
RvVAT039_RS09230	PF01037	Lrp/AsnC ligand binding domain
RvVAT039_RS09235	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
RvVAT039_RS09235	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
RvVAT039_RS09240	PF00561	alpha/beta hydrolase fold
RvVAT039_RS09245	PF08241	Methyltransferase domain
RvVAT039_RS09250	PF06233	Usg-like family
RvVAT039_RS09255	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS09260	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS09265	PF00497	Bacterial extracellular solute-binding proteins, family 3
RvVAT039_RS09275	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
RvVAT039_RS09280	PF12804	MobA-like NTP transferase domain
RvVAT039_RS09290	PF04055	Radical SAM superfamily
RvVAT039_RS09290	PF06463	Molybdenum Cofactor Synthesis C
RvVAT039_RS09300	PF17158	Membrane-associated sensor, integral membrane domain
RvVAT039_RS09300	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS09305	PF05681	Fumarate hydratase (Fumerase)
RvVAT039_RS09305	PF05683	Fumarase C-terminus
RvVAT039_RS09310	PF00206	Lyase
RvVAT039_RS09310	PF10415	Fumarase C C-terminus
RvVAT039_RS09315	PF03734	L,D-transpeptidase catalytic domain
RvVAT039_RS09315	PF01471	Putative peptidoglycan binding domain
RvVAT039_RS09320	PF13419	Haloacid dehalogenase-like hydrolase
RvVAT039_RS09325	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
RvVAT039_RS09335	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RvVAT039_RS09335	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
RvVAT039_RS09340	PF01474	Class-II DAHP synthetase family
RvVAT039_RS09355	PF00115	Cytochrome C and Quinol oxidase polypeptide I
RvVAT039_RS09370	PF14715	N-terminal domain of cytochrome oxidase-cbb3, FixP 
RvVAT039_RS09370	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
RvVAT039_RS09380	PF00360	Phytochrome region
RvVAT039_RS09380	PF00563	EAL domain
RvVAT039_RS09380	PF01590	GAF domain
RvVAT039_RS09380	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS09385	PF02151	UvrB/uvrC motif
RvVAT039_RS09385	PF12344	Ultra-violet resistance protein B
RvVAT039_RS09385	PF17757	UvrB interaction domain
RvVAT039_RS09385	PF00271	Helicase conserved C-terminal domain
RvVAT039_RS09385	PF04851	Type III restriction enzyme, res subunit
RvVAT039_RS09395	PF01979	Amidohydrolase family
RvVAT039_RS09415	PF00793	DAHP synthetase I family
RvVAT039_RS09420	PF00113	Enolase, C-terminal TIM barrel domain
RvVAT039_RS09420	PF03952	Enolase, N-terminal domain
RvVAT039_RS09430	PF00676	Dehydrogenase E1 component
RvVAT039_RS09435	PF00364	Biotin-requiring enzyme
RvVAT039_RS09435	PF02779	Transketolase, pyrimidine binding domain
RvVAT039_RS09435	PF02780	Transketolase, C-terminal domain
RvVAT039_RS09440	PF00364	Biotin-requiring enzyme
RvVAT039_RS09440	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
RvVAT039_RS09440	PF02817	e3 binding domain
RvVAT039_RS09460	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RvVAT039_RS09460	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
RvVAT039_RS09470	PF04055	Radical SAM superfamily
RvVAT039_RS09470	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
RvVAT039_RS09475	PF01202	Shikimate kinase
RvVAT039_RS09485	PF07690	Major Facilitator Superfamily
RvVAT039_RS09485	PF00083	Sugar (and other) transporter
RvVAT039_RS09490	PF03364	Polyketide cyclase / dehydrase and lipid transport
RvVAT039_RS09495	PF18146	Damage-inducible protein CinA KH domain
RvVAT039_RS09495	PF02464	Competence-damaged protein
RvVAT039_RS09495	PF00994	Probable molybdopterin binding domain
RvVAT039_RS09500	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
RvVAT039_RS09500	PF02542	YgbB family
RvVAT039_RS09505	PF01207	Dihydrouridine synthase (Dus)
RvVAT039_RS09510	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS09510	PF00989	PAS fold
RvVAT039_RS09510	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS09515	PF02954	Bacterial regulatory protein, Fis family
RvVAT039_RS09515	PF00072	Response regulator receiver domain
RvVAT039_RS09515	PF00158	Sigma-54 interaction domain
RvVAT039_RS09520	PF00989	PAS fold
RvVAT039_RS09520	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS09520	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS09520	PF00672	HAMP domain
RvVAT039_RS09525	PF00072	Response regulator receiver domain
RvVAT039_RS09525	PF02954	Bacterial regulatory protein, Fis family
RvVAT039_RS09525	PF00158	Sigma-54 interaction domain
RvVAT039_RS09530	PF17209	Hfq protein
RvVAT039_RS09535	PF13167	GTP-binding GTPase N-terminal
RvVAT039_RS09535	PF01926	50S ribosome-binding GTPase
RvVAT039_RS09535	PF16360	GTP-binding GTPase Middle Region
RvVAT039_RS09545	PF03819	MazG nucleotide pyrophosphohydrolase domain
RvVAT039_RS09555	PF10414	Sirohaem synthase dimerisation region
RvVAT039_RS09555	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
RvVAT039_RS09575	PF00970	Oxidoreductase FAD-binding domain
RvVAT039_RS09575	PF00175	Oxidoreductase NAD-binding domain 
RvVAT039_RS09585	PF05036	Sporulation related domain
RvVAT039_RS09585	PF03330	Lytic transglycolase
RvVAT039_RS09590	PF07943	Penicillin-binding protein 5, C-terminal domain
RvVAT039_RS09590	PF00768	D-alanyl-D-alanine carboxypeptidase
RvVAT039_RS09595	PF02223	Thymidylate kinase
RvVAT039_RS09600	PF09115	DNA polymerase III, delta subunit, C terminal
RvVAT039_RS09605	PF01925	Sulfite exporter TauE/SafE
RvVAT039_RS09610	PF09334	tRNA synthetases class I (M)
RvVAT039_RS09610	PF08264	Anticodon-binding domain of tRNA
RvVAT039_RS09615	PF01026	TatD related DNase
RvVAT039_RS09620	PF03099	Biotin/lipoate A/B protein ligase family
RvVAT039_RS09620	PF12706	Beta-lactamase superfamily domain
RvVAT039_RS09625	PF00654	Voltage gated chloride channel
RvVAT039_RS09635	PF02683	Cytochrome C biogenesis protein transmembrane region
RvVAT039_RS09640	PF01494	FAD binding domain
RvVAT039_RS09655	PF00005	ABC transporter
RvVAT039_RS09670	PF02608	ABC transporter substrate-binding protein PnrA-like
RvVAT039_RS09680	PF14602	Hexapeptide repeat of succinyl-transferase
RvVAT039_RS09680	PF00132	Bacterial transferase hexapeptide (six repeats)
RvVAT039_RS09680	PF12804	MobA-like NTP transferase domain
RvVAT039_RS09685	PF01380	SIS domain
RvVAT039_RS09705	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS09710	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS09715	PF00005	ABC transporter
RvVAT039_RS09715	PF17912	MalK OB fold domain
RvVAT039_RS09730	PF02492	CobW/HypB/UreG, nucleotide-binding domain
RvVAT039_RS09730	PF07683	Cobalamin synthesis protein cobW C-terminal domain
RvVAT039_RS09735	PF01297	Zinc-uptake complex component A periplasmic
RvVAT039_RS09740	PF00005	ABC transporter
RvVAT039_RS09745	PF00950	ABC 3 transport family
RvVAT039_RS09750	PF01475	Ferric uptake regulator family
RvVAT039_RS09755	PF00132	Bacterial transferase hexapeptide (six repeats)
RvVAT039_RS09770	PF07943	Penicillin-binding protein 5, C-terminal domain
RvVAT039_RS09770	PF00768	D-alanyl-D-alanine carboxypeptidase
RvVAT039_RS09805	PF01734	Patatin-like phospholipase
RvVAT039_RS09810	PF01502	Phosphoribosyl-AMP cyclohydrolase
RvVAT039_RS09815	PF01227	GTP cyclohydrolase I
RvVAT039_RS09825	PF01809	Putative membrane protein insertion efficiency factor
RvVAT039_RS09835	PF02824	TGS domain
RvVAT039_RS09835	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
RvVAT039_RS09835	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
RvVAT039_RS09835	PF03129	Anticodon binding domain
RvVAT039_RS09850	PF02445	Quinolinate synthetase A protein
RvVAT039_RS09855	PF00890	FAD binding domain
RvVAT039_RS09855	PF02910	Fumarate reductase flavoprotein C-term
RvVAT039_RS09860	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
RvVAT039_RS09860	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
RvVAT039_RS09895	PF00583	Acetyltransferase (GNAT) family
RvVAT039_RS09900	PF00204	DNA gyrase B
RvVAT039_RS09900	PF00986	DNA gyrase B subunit, carboxyl terminus
RvVAT039_RS09900	PF01751	Toprim domain
RvVAT039_RS09900	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS09910	PF00072	Response regulator receiver domain
RvVAT039_RS09910	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS09915	PF00121	Triosephosphate isomerase
RvVAT039_RS09920	PF03840	Preprotein translocase SecG subunit
RvVAT039_RS09925	PF06418	CTP synthase N-terminus
RvVAT039_RS09925	PF00117	Glutamine amidotransferase class-I
RvVAT039_RS09945	PF00111	2Fe-2S iron-sulfur cluster binding domain
RvVAT039_RS09955	PF00809	Pterin binding enzyme
RvVAT039_RS09965	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
RvVAT039_RS09975	PF05128	Domain of unknown function (DUF697) 
RvVAT039_RS09980	PF04317	YcjX-like family, DUF463
RvVAT039_RS09990	PF01258	Prokaryotic dksA/traR C4-type zinc finger
RvVAT039_RS10000	PF00072	Response regulator receiver domain
RvVAT039_RS10000	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS10000	PF08448	PAS fold
RvVAT039_RS10000	PF13188	PAS domain
RvVAT039_RS10000	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS10010	PF00440	Bacterial regulatory proteins, tetR family
RvVAT039_RS10015	PF01799	[2Fe-2S] binding domain
RvVAT039_RS10015	PF10518	TAT (twin-arginine translocation) pathway signal sequence
RvVAT039_RS10015	PF00111	2Fe-2S iron-sulfur cluster binding domain
RvVAT039_RS10020	PF03450	CO dehydrogenase flavoprotein C-terminal domain
RvVAT039_RS10020	PF00941	FAD binding domain in molybdopterin dehydrogenase
RvVAT039_RS10025	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
RvVAT039_RS10025	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RvVAT039_RS10030	PF02625	XdhC and CoxI family
RvVAT039_RS10030	PF13478	XdhC Rossmann domain
RvVAT039_RS10050	PF01702	Queuine tRNA-ribosyltransferase
RvVAT039_RS10055	PF02547	Queuosine biosynthesis protein
RvVAT039_RS10060	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
RvVAT039_RS10065	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
RvVAT039_RS10070	PF01467	Cytidylyltransferase-like
RvVAT039_RS10080	PF01521	Iron-sulphur cluster biosynthesis
RvVAT039_RS10085	PF01883	Iron-sulfur cluster assembly protein
RvVAT039_RS10090	PF00266	Aminotransferase class-V
RvVAT039_RS10095	PF01458	Uncharacterized protein family (UPF0051)
RvVAT039_RS10100	PF00005	ABC transporter
RvVAT039_RS10110	PF01458	Uncharacterized protein family (UPF0051)
RvVAT039_RS10115	PF00266	Aminotransferase class-V
RvVAT039_RS10120	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
RvVAT039_RS10125	PF01810	LysE type translocator
RvVAT039_RS10130	PF00270	DEAD/DEAH box helicase
RvVAT039_RS10130	PF00271	Helicase conserved C-terminal domain
RvVAT039_RS10145	PF00264	Common central domain of tyrosinase
RvVAT039_RS10155	PF01613	Flavin reductase like domain
RvVAT039_RS10170	PF00834	Ribulose-phosphate 3 epimerase family
RvVAT039_RS10180	PF00206	Lyase
RvVAT039_RS10180	PF10397	Adenylosuccinate lyase C-terminus
RvVAT039_RS10185	PF01810	LysE type translocator
RvVAT039_RS10195	PF00920	Dehydratase family
RvVAT039_RS10200	PF00174	Oxidoreductase molybdopterin binding domain
RvVAT039_RS10205	PF01794	Ferric reductase like transmembrane component
RvVAT039_RS10220	PF17851	Beta xylosidase C-terminal Concanavalin A-like domain 
RvVAT039_RS10220	PF04616	Glycosyl hydrolases family 43
RvVAT039_RS10225	PF00248	Aldo/keto reductase family
RvVAT039_RS10245	PF00005	ABC transporter
RvVAT039_RS10245	PF17912	MalK OB fold domain
RvVAT039_RS10250	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS10255	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS10260	PF01547	Bacterial extracellular solute-binding protein
RvVAT039_RS10275	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
RvVAT039_RS10275	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
RvVAT039_RS10280	PF03597	Cytochrome oxidase maturation protein cbb3-type
RvVAT039_RS10290	PF05751	FixH
RvVAT039_RS10295	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
RvVAT039_RS10295	PF12801	4Fe-4S binding domain
RvVAT039_RS10295	PF13746	4Fe-4S dicluster domain
RvVAT039_RS10300	PF00403	Heavy-metal-associated domain
RvVAT039_RS10305	PF03989	DNA gyrase C-terminal domain, beta-propeller
RvVAT039_RS10305	PF00521	DNA gyrase/topoisomerase IV, subunit A
RvVAT039_RS10310	PF01914	MarC family integral membrane protein
RvVAT039_RS10320	PF00436	Single-strand binding protein family
RvVAT039_RS10325	PF17755	UvrA DNA-binding domain
RvVAT039_RS10325	PF17760	UvrA interaction domain
RvVAT039_RS10335	PF18014	Acetyltransferase (GNAT) domain
RvVAT039_RS10335	PF13673	Acetyltransferase (GNAT) domain
RvVAT039_RS10340	PF03853	YjeF-related protein N-terminus
RvVAT039_RS10340	PF01256	Carbohydrate kinase
RvVAT039_RS10345	PF00543	Nitrogen regulatory protein P-II
RvVAT039_RS10350	PF03951	Glutamine synthetase, beta-Grasp domain
RvVAT039_RS10350	PF00120	Glutamine synthetase, catalytic domain
RvVAT039_RS10370	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS10380	PF00892	EamA-like transporter family
RvVAT039_RS10390	PF01810	LysE type translocator
RvVAT039_RS10395	PF02559	CarD-like/TRCF domain
RvVAT039_RS10395	PF17757	UvrB interaction domain
RvVAT039_RS10395	PF03461	TRCF domain
RvVAT039_RS10395	PF00270	DEAD/DEAH box helicase
RvVAT039_RS10395	PF00271	Helicase conserved C-terminal domain
RvVAT039_RS10405	PF00270	DEAD/DEAH box helicase
RvVAT039_RS10405	PF17191	RecG wedge domain
RvVAT039_RS10405	PF00271	Helicase conserved C-terminal domain
RvVAT039_RS10435	PF00313	'Cold-shock' DNA-binding domain
RvVAT039_RS10440	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
RvVAT039_RS10465	PF17768	RecJ OB domain
RvVAT039_RS10465	PF02272	DHHA1 domain
RvVAT039_RS10465	PF01368	DHH family
RvVAT039_RS10470	PF03447	Homoserine dehydrogenase, NAD binding domain
RvVAT039_RS10470	PF00742	Homoserine dehydrogenase
RvVAT039_RS10470	PF01842	ACT domain
RvVAT039_RS10475	PF00155	Aminotransferase class I and II
RvVAT039_RS10485	PF07167	Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus
RvVAT039_RS10490	PF03749	Sugar fermentation stimulation protein RE domain
RvVAT039_RS10490	PF17746	SfsA N-terminal OB domain
RvVAT039_RS10495	PF03601	Conserved hypothetical protein 698
RvVAT039_RS10500	PF03466	LysR substrate binding domain
RvVAT039_RS10500	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS10505	PF00557	Metallopeptidase family M24
RvVAT039_RS10510	PF04002	RadC-like JAB domain
RvVAT039_RS10515	PF07559	Flagellar basal body protein FlaE
RvVAT039_RS10515	PF00460	Flagella basal body rod protein
RvVAT039_RS10515	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
RvVAT039_RS10525	PF00083	Sugar (and other) transporter
RvVAT039_RS10540	PF13419	Haloacid dehalogenase-like hydrolase
RvVAT039_RS10545	PF01479	S4 domain
RvVAT039_RS10545	PF00849	RNA pseudouridylate synthase
RvVAT039_RS10550	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
RvVAT039_RS10570	PF01571	Aminomethyltransferase folate-binding domain
RvVAT039_RS10570	PF08669	Glycine cleavage T-protein C-terminal barrel domain
RvVAT039_RS10575	PF01597	Glycine cleavage H-protein
RvVAT039_RS10580	PF02347	Glycine cleavage system P-protein
RvVAT039_RS10600	PF00491	Arginase family
RvVAT039_RS10605	PF00155	Aminotransferase class I and II
RvVAT039_RS10610	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RvVAT039_RS10610	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
RvVAT039_RS10615	PF12706	Beta-lactamase superfamily domain
RvVAT039_RS10620	PF05698	Bacterial trigger factor protein (TF) C-terminus
RvVAT039_RS10620	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
RvVAT039_RS10620	PF05697	Bacterial trigger factor protein (TF)
RvVAT039_RS10650	PF16193	AAA C-terminal domain
RvVAT039_RS10650	PF00004	ATPase family associated with various cellular activities (AAA)
RvVAT039_RS10650	PF12002	MgsA AAA+ ATPase C terminal
RvVAT039_RS10655	PF17820	PDZ domain
RvVAT039_RS10655	PF13180	PDZ domain
RvVAT039_RS10670	PF17763	Glutaminase/Asparaginase C-terminal domain
RvVAT039_RS10670	PF00710	Asparaginase, N-terminal
RvVAT039_RS10680	PF02872	5'-nucleotidase, C-terminal domain
RvVAT039_RS10680	PF00149	Calcineurin-like phosphoesterase
RvVAT039_RS10690	PF00535	Glycosyl transferase family 2
RvVAT039_RS10695	PF00291	Pyridoxal-phosphate dependent enzyme
RvVAT039_RS10695	PF00585	C-terminal regulatory domain of Threonine dehydratase
RvVAT039_RS10705	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS10710	PF12857	TOBE-like domain
RvVAT039_RS10710	PF00005	ABC transporter
RvVAT039_RS10715	PF09347	Domain of unknown function (DUF1989)
RvVAT039_RS10725	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
RvVAT039_RS10725	PF18140	Propionyl-coenzyme A carboxylase BT domain
RvVAT039_RS10725	PF02785	Biotin carboxylase C-terminal domain
RvVAT039_RS10725	PF00364	Biotin-requiring enzyme
RvVAT039_RS10725	PF00289	Biotin carboxylase, N-terminal domain
RvVAT039_RS10745	PF08240	Alcohol dehydrogenase GroES-like domain
RvVAT039_RS10745	PF00107	Zinc-binding dehydrogenase
RvVAT039_RS10750	PF13673	Acetyltransferase (GNAT) domain
RvVAT039_RS10755	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
RvVAT039_RS10765	PF00756	Putative esterase
RvVAT039_RS10770	PF02684	Lipid-A-disaccharide synthetase
RvVAT039_RS10780	PF00132	Bacterial transferase hexapeptide (six repeats)
RvVAT039_RS10780	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
RvVAT039_RS10785	PF07977	FabA-like domain
RvVAT039_RS10790	PF00132	Bacterial transferase hexapeptide (six repeats)
RvVAT039_RS10790	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
RvVAT039_RS10795	PF01103	Surface antigen
RvVAT039_RS10795	PF07244	Surface antigen variable number repeat
RvVAT039_RS10800	PF17820	PDZ domain
RvVAT039_RS10800	PF02163	Peptidase family M50
RvVAT039_RS10810	PF01255	Putative undecaprenyl diphosphate synthase
RvVAT039_RS10815	PF01765	Ribosome recycling factor
RvVAT039_RS10820	PF00696	Amino acid kinase family
RvVAT039_RS10825	PF00889	Elongation factor TS
RvVAT039_RS10830	PF00318	Ribosomal protein S2
RvVAT039_RS10855	PF01230	HIT domain
RvVAT039_RS10870	PF07724	AAA domain (Cdc48 subfamily)
RvVAT039_RS10870	PF10431	C-terminal, D2-small domain, of ClpB protein 
RvVAT039_RS10870	PF00004	ATPase family associated with various cellular activities (AAA)
RvVAT039_RS10870	PF02861	Clp amino terminal domain, pathogenicity island component
RvVAT039_RS10870	PF17871	AAA lid domain
RvVAT039_RS10875	PF02617	ATP-dependent Clp protease adaptor protein ClpS
RvVAT039_RS10890	PF00132	Bacterial transferase hexapeptide (six repeats)
RvVAT039_RS10890	PF06426	Serine acetyltransferase, N-terminal 
RvVAT039_RS10900	PF00561	alpha/beta hydrolase fold
RvVAT039_RS10915	PF01494	FAD binding domain
RvVAT039_RS10920	PF01053	Cys/Met metabolism PLP-dependent enzyme
RvVAT039_RS10925	PF00497	Bacterial extracellular solute-binding proteins, family 3
RvVAT039_RS10930	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS10935	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS10940	PF00005	ABC transporter
RvVAT039_RS10945	PF08447	PAS fold
RvVAT039_RS10945	PF13426	PAS domain
RvVAT039_RS10945	PF07536	HWE histidine kinase
RvVAT039_RS10950	PF02272	DHHA1 domain
RvVAT039_RS10950	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
RvVAT039_RS10950	PF01411	tRNA synthetases class II (A)
RvVAT039_RS10955	PF00154	recA bacterial DNA recombination protein
RvVAT039_RS10965	PF04227	Indigoidine synthase A like protein
RvVAT039_RS10970	PF01726	LexA DNA binding domain
RvVAT039_RS10970	PF00717	Peptidase S24-like
RvVAT039_RS10975	PF00753	Metallo-beta-lactamase superfamily
RvVAT039_RS10975	PF03772	Competence protein
RvVAT039_RS10980	PF00285	Citrate synthase, C-terminal domain
RvVAT039_RS10990	PF02885	Glycosyl transferase family, helical bundle domain
RvVAT039_RS10990	PF00591	Glycosyl transferase family, a/b domain
RvVAT039_RS10995	PF00218	Indole-3-glycerol phosphate synthase
RvVAT039_RS11000	PF01967	MoaC family
RvVAT039_RS11005	PF00994	Probable molybdopterin binding domain
RvVAT039_RS11005	PF03454	MoeA C-terminal region (domain IV)
RvVAT039_RS11005	PF03453	MoeA N-terminal region (domain I and II)
RvVAT039_RS11010	PF01569	PAP2 superfamily
RvVAT039_RS11015	PF07685	CobB/CobQ-like glutamine amidotransferase domain
RvVAT039_RS11025	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS11030	PF00005	ABC transporter
RvVAT039_RS11030	PF00571	CBS domain
RvVAT039_RS11065	PF00551	Formyl transferase
RvVAT039_RS11070	PF00067	Cytochrome P450
RvVAT039_RS11075	PF03466	LysR substrate binding domain
RvVAT039_RS11075	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS11090	PF12833	Helix-turn-helix domain
RvVAT039_RS11090	PF01965	DJ-1/PfpI family
RvVAT039_RS11095	PF04480	Protein of unknown function (DUF559)
RvVAT039_RS11105	PF08471	Class II vitamin B12-dependent ribonucleotide reductase
RvVAT039_RS11105	PF02867	Ribonucleotide reductase, barrel domain
RvVAT039_RS11115	PF00672	HAMP domain
RvVAT039_RS11115	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS11125	PF00156	Phosphoribosyl transferase domain
RvVAT039_RS11135	PF00994	Probable molybdopterin binding domain
RvVAT039_RS11135	PF18146	Damage-inducible protein CinA KH domain
RvVAT039_RS11135	PF02464	Competence-damaged protein
RvVAT039_RS11140	PF00672	HAMP domain
RvVAT039_RS11140	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS11150	PF01584	CheW-like domain
RvVAT039_RS11160	PF03313	Serine dehydratase alpha chain
RvVAT039_RS11160	PF03315	Serine dehydratase beta chain
RvVAT039_RS11180	PF00376	MerR family regulatory protein
RvVAT039_RS11180	PF09278	MerR, DNA binding
RvVAT039_RS11185	PF03448	MgtE intracellular N domain
RvVAT039_RS11185	PF00571	CBS domain
RvVAT039_RS11185	PF01769	Divalent cation transporter
RvVAT039_RS11190	PF03358	NADPH-dependent FMN reductase
RvVAT039_RS11195	PF03186	CobD/Cbib protein
RvVAT039_RS11200	PF00155	Aminotransferase class I and II
RvVAT039_RS11205	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
RvVAT039_RS11205	PF07685	CobB/CobQ-like glutamine amidotransferase domain
RvVAT039_RS11210	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
RvVAT039_RS11215	PF01888	CbiD
RvVAT039_RS11220	PF02571	Precorrin-6x reductase CbiJ/CobK
RvVAT039_RS11225	PF03975	CheD chemotactic sensory transduction
RvVAT039_RS11235	PF01156	Inosine-uridine preferring nucleoside hydrolase
RvVAT039_RS11240	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
RvVAT039_RS11245	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
RvVAT039_RS11250	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
RvVAT039_RS11255	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
RvVAT039_RS11260	PF02570	Precorrin-8X methylmutase
RvVAT039_RS11265	PF01903	CbiX
RvVAT039_RS11270	PF01925	Sulfite exporter TauE/SafE
RvVAT039_RS11275	PF03693	Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH
RvVAT039_RS11285	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
RvVAT039_RS11290	PF02514	CobN/Magnesium Chelatase
RvVAT039_RS11295	PF02492	CobW/HypB/UreG, nucleotide-binding domain
RvVAT039_RS11295	PF07683	Cobalamin synthesis protein cobW C-terminal domain
RvVAT039_RS11300	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
RvVAT039_RS11325	PF01134	Glucose inhibited division protein A
RvVAT039_RS11345	PF07549	SecD/SecF GG Motif
RvVAT039_RS11345	PF02355	Protein export membrane protein
RvVAT039_RS11350	PF02699	Preprotein translocase subunit
RvVAT039_RS11360	PF01476	LysM domain
RvVAT039_RS11360	PF01551	Peptidase family M23
RvVAT039_RS11370	PF01975	Survival protein SurE
RvVAT039_RS11375	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
RvVAT039_RS11375	PF02403	Seryl-tRNA synthetase N-terminal domain
RvVAT039_RS11380	PF00902	Sec-independent protein translocase protein (TatC)
RvVAT039_RS11385	PF02416	mttA/Hcf106 family
RvVAT039_RS11390	PF02416	mttA/Hcf106 family
RvVAT039_RS11395	PF04079	Segregation and condensation complex subunit ScpB
RvVAT039_RS11400	PF02616	Segregation and condensation protein ScpA
RvVAT039_RS11405	PF00933	Glycosyl hydrolase family 3 N terminal domain
RvVAT039_RS11415	PF03485	Arginyl tRNA synthetase N terminal domain
RvVAT039_RS11415	PF05746	DALR anticodon binding domain
RvVAT039_RS11415	PF00750	tRNA synthetases class I (R)
RvVAT039_RS11420	PF01966	HD domain
RvVAT039_RS11420	PF13286	Phosphohydrolase-associated domain
RvVAT039_RS11425	PF01521	Iron-sulphur cluster biosynthesis
RvVAT039_RS11435	PF08238	Sel1 repeat
RvVAT039_RS11445	PF10458	Valyl tRNA synthetase tRNA binding arm
RvVAT039_RS11445	PF00133	tRNA synthetases class I (I, L, M and V)
RvVAT039_RS11445	PF08264	Anticodon-binding domain of tRNA
RvVAT039_RS11455	PF02321	Outer membrane efflux protein
RvVAT039_RS11605	PF03796	DnaB-like helicase C terminal domain
RvVAT039_RS11605	PF00772	DnaB-like helicase N terminal domain
RvVAT039_RS11605	PF14528	LAGLIDADG-like domain
RvVAT039_RS11640	PF01695	IstB-like ATP binding protein
RvVAT039_RS11645	PF00665	Integrase core domain
RvVAT039_RS11675	PF01061	ABC-2 type transporter
RvVAT039_RS11680	PF00005	ABC transporter
RvVAT039_RS11685	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS11685	PF00072	Response regulator receiver domain
RvVAT039_RS11690	PF00072	Response regulator receiver domain
RvVAT039_RS11695	PF01571	Aminomethyltransferase folate-binding domain
RvVAT039_RS11695	PF16350	FAD dependent oxidoreductase central domain
RvVAT039_RS11695	PF08669	Glycine cleavage T-protein C-terminal barrel domain
RvVAT039_RS11695	PF01266	FAD dependent oxidoreductase
RvVAT039_RS11705	PF08241	Methyltransferase domain
RvVAT039_RS11710	PF00924	Mechanosensitive ion channel
RvVAT039_RS11710	PF12795	Mechanosensitive ion channel porin domain
RvVAT039_RS11710	PF12794	Mechanosensitive ion channel inner membrane domain 1
RvVAT039_RS11725	PF01497	Periplasmic binding protein
RvVAT039_RS11730	PF01032	FecCD transport family
RvVAT039_RS11735	PF00005	ABC transporter
RvVAT039_RS11750	PF02567	Phenazine biosynthesis-like protein
RvVAT039_RS11760	PF08447	PAS fold
RvVAT039_RS11760	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS11760	PF13426	PAS domain
RvVAT039_RS11770	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
RvVAT039_RS11770	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
RvVAT039_RS11780	PF01625	Peptide methionine sulfoxide reductase
RvVAT039_RS11795	PF01037	Lrp/AsnC ligand binding domain
RvVAT039_RS11800	PF01177	Asp/Glu/Hydantoin racemase
RvVAT039_RS11805	PF00440	Bacterial regulatory proteins, tetR family
RvVAT039_RS11810	PF07690	Major Facilitator Superfamily
RvVAT039_RS11815	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS11815	PF08447	PAS fold
RvVAT039_RS11815	PF13426	PAS domain
RvVAT039_RS11820	PF01638	HxlR-like helix-turn-helix
RvVAT039_RS11830	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
RvVAT039_RS11835	PF07739	TipAS antibiotic-recognition domain
RvVAT039_RS11835	PF13411	MerR HTH family regulatory protein
RvVAT039_RS11840	PF14490	Helix-hairpin-helix containing domain
RvVAT039_RS11840	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
RvVAT039_RS11840	PF13538	UvrD-like helicase C-terminal domain
RvVAT039_RS11845	PF00248	Aldo/keto reductase family
RvVAT039_RS11855	PF10369	Small subunit of acetolactate synthase
RvVAT039_RS11860	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
RvVAT039_RS11860	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
RvVAT039_RS11860	PF00205	Thiamine pyrophosphate enzyme, central domain
RvVAT039_RS11880	PF18429	Domain of unknown function (DUF5609)
RvVAT039_RS11885	PF13302	Acetyltransferase (GNAT) domain
RvVAT039_RS11890	PF13180	PDZ domain
RvVAT039_RS11895	PF01145	SPFH domain / Band 7 family
RvVAT039_RS11900	PF01145	SPFH domain / Band 7 family
RvVAT039_RS11905	PF00186	Dihydrofolate reductase
RvVAT039_RS11910	PF07681	DoxX
RvVAT039_RS11915	PF00303	Thymidylate synthase
RvVAT039_RS11950	PF01565	FAD binding domain 
RvVAT039_RS11950	PF02913	FAD linked oxidases, C-terminal domain
RvVAT039_RS11955	PF00005	ABC transporter
RvVAT039_RS11960	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS11965	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS11970	PF12849	PBP superfamily domain
RvVAT039_RS11975	PF00580	UvrD/REP helicase N-terminal domain
RvVAT039_RS11975	PF13361	UvrD-like helicase C-terminal domain
RvVAT039_RS12000	PF01011	PQQ enzyme repeat
RvVAT039_RS12005	PF00857	Isochorismatase family
RvVAT039_RS12010	PF02569	Pantoate-beta-alanine ligase
RvVAT039_RS12015	PF02548	Ketopantoate hydroxymethyltransferase
RvVAT039_RS12045	PF01321	Creatinase/Prolidase N-terminal domain
RvVAT039_RS12045	PF00557	Metallopeptidase family M24
RvVAT039_RS12060	PF02630	SCO1/SenC
RvVAT039_RS12065	PF00672	HAMP domain
RvVAT039_RS12065	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS12070	PF01584	CheW-like domain
RvVAT039_RS12085	PF11490	DNA polymerase III polC-type N-terminus II
RvVAT039_RS12085	PF14579	Helix-hairpin-helix motif
RvVAT039_RS12085	PF07733	Bacterial DNA polymerase III alpha NTPase domain
RvVAT039_RS12085	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
RvVAT039_RS12085	PF02811	PHP domain
RvVAT039_RS12085	PF00929	Exonuclease
RvVAT039_RS12095	PF00583	Acetyltransferase (GNAT) family
RvVAT039_RS12100	PF00271	Helicase conserved C-terminal domain
RvVAT039_RS12100	PF00270	DEAD/DEAH box helicase
RvVAT039_RS12105	PF01593	Flavin containing amine oxidoreductase
RvVAT039_RS12125	PF01653	NAD-dependent DNA ligase adenylation domain
RvVAT039_RS12125	PF12826	Helix-hairpin-helix motif
RvVAT039_RS12125	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
RvVAT039_RS12125	PF00533	BRCA1 C Terminus (BRCT) domain
RvVAT039_RS12125	PF03120	NAD-dependent DNA ligase OB-fold domain
RvVAT039_RS12135	PF13396	Phospholipase_D-nuclease N-terminal
RvVAT039_RS12135	PF13091	PLD-like domain
RvVAT039_RS12140	PF02463	RecF/RecN/SMC N terminal domain
RvVAT039_RS12145	PF13525	Outer membrane lipoprotein
RvVAT039_RS12150	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
RvVAT039_RS12155	PF00091	Tubulin/FtsZ family, GTPase domain
RvVAT039_RS12155	PF12327	FtsZ family, C-terminal domain
RvVAT039_RS12160	PF02491	SHS2 domain inserted in FTSA
RvVAT039_RS12165	PF08478	POTRA domain, FtsQ-type
RvVAT039_RS12165	PF03799	Cell division protein FtsQ
RvVAT039_RS12170	PF01820	D-ala D-ala ligase N-terminus
RvVAT039_RS12170	PF07478	D-ala D-ala ligase C-terminus
RvVAT039_RS12180	PF00083	Sugar (and other) transporter
RvVAT039_RS12180	PF07690	Major Facilitator Superfamily
RvVAT039_RS12185	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
RvVAT039_RS12185	PF01565	FAD binding domain 
RvVAT039_RS12190	PF08245	Mur ligase middle domain
RvVAT039_RS12190	PF02875	Mur ligase family, glutamate ligase domain
RvVAT039_RS12190	PF01225	Mur ligase family, catalytic domain
RvVAT039_RS12195	PF03033	Glycosyltransferase family 28 N-terminal domain
RvVAT039_RS12195	PF04101	Glycosyltransferase family 28 C-terminal domain
RvVAT039_RS12200	PF01098	Cell cycle protein
RvVAT039_RS12205	PF08245	Mur ligase middle domain
RvVAT039_RS12210	PF00953	Glycosyl transferase family 4
RvVAT039_RS12210	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
RvVAT039_RS12215	PF01225	Mur ligase family, catalytic domain
RvVAT039_RS12215	PF02875	Mur ligase family, glutamate ligase domain
RvVAT039_RS12215	PF08245	Mur ligase middle domain
RvVAT039_RS12220	PF08245	Mur ligase middle domain
RvVAT039_RS12220	PF02875	Mur ligase family, glutamate ligase domain
RvVAT039_RS12220	PF01225	Mur ligase family, catalytic domain
RvVAT039_RS12225	PF00905	Penicillin binding protein transpeptidase domain
RvVAT039_RS12225	PF03717	Penicillin-binding Protein dimerisation domain
RvVAT039_RS12235	PF01795	MraW methylase family
RvVAT039_RS12240	PF02381	MraZ protein, putative antitoxin-like
RvVAT039_RS12260	PF01510	N-acetylmuramoyl-L-alanine amidase
RvVAT039_RS12265	PF05099	Tellurite resistance protein TerB
RvVAT039_RS12265	PF00226	DnaJ domain
RvVAT039_RS12270	PF00365	Phosphofructokinase
RvVAT039_RS12300	PF01183	Glycosyl hydrolases family 25
RvVAT039_RS12315	PF01965	DJ-1/PfpI family
RvVAT039_RS12315	PF12833	Helix-turn-helix domain
RvVAT039_RS12320	PF02219	Methylenetetrahydrofolate reductase
RvVAT039_RS12325	PF01209	ubiE/COQ5 methyltransferase family
RvVAT039_RS12330	PF00672	HAMP domain
RvVAT039_RS12330	PF02743	Cache domain
RvVAT039_RS12330	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS12335	PF02203	Tar ligand binding domain homologue
RvVAT039_RS12335	PF00672	HAMP domain
RvVAT039_RS12335	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS12340	PF00005	ABC transporter
RvVAT039_RS12340	PF12848	ABC transporter
RvVAT039_RS12345	PF00445	Ribonuclease T2 family
RvVAT039_RS12350	PF12146	Serine aminopeptidase, S33
RvVAT039_RS12360	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
RvVAT039_RS12360	PF00205	Thiamine pyrophosphate enzyme, central domain
RvVAT039_RS12360	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
RvVAT039_RS12370	PF02627	Carboxymuconolactone decarboxylase family
RvVAT039_RS12375	PF01042	Endoribonuclease L-PSP
RvVAT039_RS12390	PF03734	L,D-transpeptidase catalytic domain
RvVAT039_RS12390	PF01476	LysM domain
RvVAT039_RS12395	PF07015	VirC1 protein
RvVAT039_RS12400	PF00465	Iron-containing alcohol dehydrogenase 
RvVAT039_RS12410	PF13416	Bacterial extracellular solute-binding protein
RvVAT039_RS12415	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS12420	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS12425	PF08402	TOBE domain
RvVAT039_RS12425	PF00005	ABC transporter
RvVAT039_RS12430	PF08447	PAS fold
RvVAT039_RS12430	PF13426	PAS domain
RvVAT039_RS12430	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS12440	PF00155	Aminotransferase class I and II
RvVAT039_RS12445	PF00196	Bacterial regulatory proteins, luxR family
RvVAT039_RS12445	PF03472	Autoinducer binding domain
RvVAT039_RS12450	PF01381	Helix-turn-helix
RvVAT039_RS12465	PF02574	Homocysteine S-methyltransferase
RvVAT039_RS12465	PF02310	B12 binding domain
RvVAT039_RS12465	PF02607	B12 binding domain
RvVAT039_RS12465	PF00809	Pterin binding enzyme
RvVAT039_RS12465	PF02965	Vitamin B12 dependent methionine synthase, activation domain
RvVAT039_RS12485	PF00565	Staphylococcal nuclease homologue
RvVAT039_RS12495	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS12495	PF00155	Aminotransferase class I and II
RvVAT039_RS12500	PF00892	EamA-like transporter family
RvVAT039_RS12505	PF13505	Outer membrane protein beta-barrel domain
RvVAT039_RS12510	PF04402	Protein of unknown function (DUF541)
RvVAT039_RS12525	PF01695	IstB-like ATP binding protein
RvVAT039_RS12530	PF00665	Integrase core domain
RvVAT039_RS12540	PF00012	Hsp70 protein
RvVAT039_RS12575	PF00313	'Cold-shock' DNA-binding domain
RvVAT039_RS12585	PF03275	UDP-galactopyranose mutase
RvVAT039_RS12610	PF01894	Uncharacterised protein family UPF0047
RvVAT039_RS12615	PF01590	GAF domain
RvVAT039_RS12615	PF00360	Phytochrome region
RvVAT039_RS12615	PF00563	EAL domain
RvVAT039_RS12615	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS12625	PF03466	LysR substrate binding domain
RvVAT039_RS12625	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS12630	PF01810	LysE type translocator
RvVAT039_RS12640	PF07687	Peptidase dimerisation domain
RvVAT039_RS12640	PF01546	Peptidase family M20/M25/M40
RvVAT039_RS12660	PF04546	Sigma-70, non-essential region
RvVAT039_RS12660	PF04545	Sigma-70, region 4
RvVAT039_RS12660	PF04539	Sigma-70 region 3
RvVAT039_RS12660	PF00140	Sigma-70 factor, region 1.2
RvVAT039_RS12660	PF03979	Sigma-70 factor, region 1.1
RvVAT039_RS12660	PF04542	Sigma-70 region 2 
RvVAT039_RS12665	PF10410	DnaB-helicase binding domain of primase
RvVAT039_RS12665	PF08275	DNA primase catalytic core, N-terminal domain
RvVAT039_RS12665	PF01807	CHC2 zinc finger
RvVAT039_RS12665	PF08278	DNA primase DnaG DnaB-binding 
RvVAT039_RS12670	PF02632	BioY family
RvVAT039_RS12675	PF06968	Biotin and Thiamin Synthesis associated domain
RvVAT039_RS12675	PF04055	Radical SAM superfamily
RvVAT039_RS12685	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
RvVAT039_RS12685	PF00117	Glutamine amidotransferase class-I
RvVAT039_RS12690	PF01554	MatE
RvVAT039_RS12695	PF03466	LysR substrate binding domain
RvVAT039_RS12695	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS12700	PF00248	Aldo/keto reductase family
RvVAT039_RS12705	PF04228	Putative neutral zinc metallopeptidase
RvVAT039_RS12720	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
RvVAT039_RS12720	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
RvVAT039_RS12720	PF02142	MGS-like domain
RvVAT039_RS12730	PF01272	Transcription elongation factor, GreA/GreB, C-term
RvVAT039_RS12730	PF03449	Transcription elongation factor, N-terminal
RvVAT039_RS12735	PF00534	Glycosyl transferases group 1
RvVAT039_RS12770	PF01037	Lrp/AsnC ligand binding domain
RvVAT039_RS12775	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RvVAT039_RS12780	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS12780	PF03466	LysR substrate binding domain
RvVAT039_RS12790	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
RvVAT039_RS12800	PF03466	LysR substrate binding domain
RvVAT039_RS12800	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS12810	PF01699	Sodium/calcium exchanger protein
RvVAT039_RS12820	PF00155	Aminotransferase class I and II
RvVAT039_RS12835	PF00313	'Cold-shock' DNA-binding domain
RvVAT039_RS12840	PF00753	Metallo-beta-lactamase superfamily
RvVAT039_RS12850	PF12802	MarR family
RvVAT039_RS12855	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS12855	PF00072	Response regulator receiver domain
RvVAT039_RS12860	PF00672	HAMP domain
RvVAT039_RS12860	PF16527	Two-component sensor protein CpxA, periplasmic domain
RvVAT039_RS12860	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS12860	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS12865	PF01588	Putative tRNA binding domain
RvVAT039_RS12870	PF14748	Pyrroline-5-carboxylate reductase dimerisation
RvVAT039_RS12870	PF03807	NADP oxidoreductase coenzyme F420-dependent
RvVAT039_RS12885	PF01790	Prolipoprotein diacylglyceryl transferase
RvVAT039_RS12900	PF00557	Metallopeptidase family M24
RvVAT039_RS12900	PF05195	Aminopeptidase P, N-terminal domain
RvVAT039_RS12910	PF08240	Alcohol dehydrogenase GroES-like domain
RvVAT039_RS12910	PF00107	Zinc-binding dehydrogenase
RvVAT039_RS12920	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
RvVAT039_RS12920	PF14572	Phosphoribosyl synthetase-associated domain
RvVAT039_RS12935	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS12940	PF13426	PAS domain
RvVAT039_RS12940	PF00158	Sigma-54 interaction domain
RvVAT039_RS12940	PF02954	Bacterial regulatory protein, Fis family
RvVAT039_RS12945	PF14693	Ribosomal protein TL5, C-terminal domain
RvVAT039_RS12945	PF01386	Ribosomal L25p family
RvVAT039_RS12950	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS12950	PF03707	Bacterial signalling protein N terminal repeat
RvVAT039_RS12950	PF00563	EAL domain
RvVAT039_RS12960	PF01195	Peptidyl-tRNA hydrolase
RvVAT039_RS12970	PF02617	ATP-dependent Clp protease adaptor protein ClpS
RvVAT039_RS12975	PF01926	50S ribosome-binding GTPase
RvVAT039_RS12975	PF06071	Protein of unknown function (DUF933)
RvVAT039_RS12995	PF00255	Glutathione peroxidase
RvVAT039_RS13005	PF00156	Phosphoribosyl transferase domain
RvVAT039_RS13010	PF00032	Cytochrome b(C-terminal)/b6/petD
RvVAT039_RS13010	PF00033	Cytochrome b/b6/petB
RvVAT039_RS13010	PF02167	Cytochrome C1 family
RvVAT039_RS13015	PF00032	Cytochrome b(C-terminal)/b6/petD
RvVAT039_RS13015	PF00033	Cytochrome b/b6/petB
RvVAT039_RS13020	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
RvVAT039_RS13020	PF00355	Rieske [2Fe-2S] domain
RvVAT039_RS13040	PF00005	ABC transporter
RvVAT039_RS13040	PF00664	ABC transporter transmembrane region
RvVAT039_RS13045	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS13045	PF08447	PAS fold
RvVAT039_RS13045	PF13426	PAS domain
RvVAT039_RS13050	PF00005	ABC transporter
RvVAT039_RS13050	PF00664	ABC transporter transmembrane region
RvVAT039_RS13055	PF00588	SpoU rRNA Methylase family
RvVAT039_RS13065	PF00669	Bacterial flagellin N-terminal helical region
RvVAT039_RS13065	PF00700	Bacterial flagellin C-terminal helical region
RvVAT039_RS13075	PF01218	Coproporphyrinogen III oxidase
RvVAT039_RS13090	PF01743	Poly A polymerase head domain
RvVAT039_RS13090	PF12627	Probable RNA and SrmB- binding site of polymerase A
RvVAT039_RS13090	PF13735	tRNA nucleotidyltransferase domain 2 putative
RvVAT039_RS13095	PF00293	NUDIX domain
RvVAT039_RS13105	PF07726	ATPase family associated with various cellular activities (AAA)
RvVAT039_RS13105	PF17863	AAA lid domain
RvVAT039_RS13125	PF00583	Acetyltransferase (GNAT) family
RvVAT039_RS13135	PF00753	Metallo-beta-lactamase superfamily
RvVAT039_RS13150	PF13409	Glutathione S-transferase, N-terminal domain
RvVAT039_RS13155	PF00293	NUDIX domain
RvVAT039_RS13165	PF00574	Clp protease
RvVAT039_RS13170	PF03594	Benzoate membrane transport protein
RvVAT039_RS13175	PF00682	HMGL-like
RvVAT039_RS13175	PF08502	LeuA allosteric (dimerisation) domain
RvVAT039_RS13185	PF06769	YoeB-like toxin of bacterial type II toxin-antitoxin system
RvVAT039_RS13190	PF13404	AsnC-type helix-turn-helix domain
RvVAT039_RS13190	PF01037	Lrp/AsnC ligand binding domain
RvVAT039_RS13205	PF04717	Type VI secretion system, phage-baseplate injector
RvVAT039_RS13230	PF04715	Anthranilate synthase component I, N terminal region
RvVAT039_RS13230	PF00117	Glutamine amidotransferase class-I
RvVAT039_RS13230	PF00425	chorismate binding enzyme
RvVAT039_RS13240	PF16916	Dimerisation domain of Zinc Transporter
RvVAT039_RS13240	PF01545	Cation efflux family
RvVAT039_RS13245	PF14489	QueF-like protein
RvVAT039_RS13255	PF09849	Uncharacterized protein conserved in bacteria (DUF2076)
RvVAT039_RS13260	PF04955	HupE / UreJ protein
RvVAT039_RS13265	PF02696	Uncharacterized ACR, YdiU/UPF0061 family
RvVAT039_RS13280	PF01268	Formate--tetrahydrofolate ligase
RvVAT039_RS13285	PF03472	Autoinducer binding domain
RvVAT039_RS13285	PF00196	Bacterial regulatory proteins, luxR family
RvVAT039_RS13300	PF00265	Thymidine kinase
RvVAT039_RS13310	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS13315	PF00571	CBS domain
RvVAT039_RS13315	PF00005	ABC transporter
RvVAT039_RS13325	PF01022	Bacterial regulatory protein, arsR family
RvVAT039_RS13330	PF00202	Aminotransferase class-III
RvVAT039_RS13340	PF13458	Periplasmic binding protein
RvVAT039_RS13355	PF01979	Amidohydrolase family
RvVAT039_RS13355	PF13382	Adenine deaminase C-terminal domain
RvVAT039_RS13370	PF00128	Alpha amylase, catalytic domain
RvVAT039_RS13375	PF13439	Glycosyltransferase Family 4
RvVAT039_RS13375	PF00534	Glycosyl transferases group 1
RvVAT039_RS13380	PF01926	50S ribosome-binding GTPase
RvVAT039_RS13380	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
RvVAT039_RS13400	PF05992	SbmA/BacA-like family
RvVAT039_RS13405	PF06779	Uncharacterised MFS-type transporter YbfB
RvVAT039_RS13415	PF00557	Metallopeptidase family M24
RvVAT039_RS13420	PF00296	Luciferase-like monooxygenase
RvVAT039_RS13425	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
RvVAT039_RS13425	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
RvVAT039_RS13435	PF01799	[2Fe-2S] binding domain
RvVAT039_RS13435	PF00111	2Fe-2S iron-sulfur cluster binding domain
RvVAT039_RS13440	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RvVAT039_RS13440	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
RvVAT039_RS13450	PF13181	Tetratricopeptide repeat
RvVAT039_RS13455	PF03466	LysR substrate binding domain
RvVAT039_RS13455	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS13465	PF01979	Amidohydrolase family
RvVAT039_RS13480	PF00005	ABC transporter
RvVAT039_RS13485	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS13520	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS13520	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS13525	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS13525	PF00072	Response regulator receiver domain
RvVAT039_RS13535	PF00576	HIUase/Transthyretin family
RvVAT039_RS13540	PF04115	Ureidoglycolate lyase
RvVAT039_RS13545	PF00975	Thioesterase domain
RvVAT039_RS13545	PF00550	Phosphopantetheine attachment site
RvVAT039_RS13545	PF00501	AMP-binding enzyme
RvVAT039_RS13545	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS13545	PF00668	Condensation domain
RvVAT039_RS13550	PF00120	Glutamine synthetase, catalytic domain
RvVAT039_RS13550	PF03951	Glutamine synthetase, beta-Grasp domain
RvVAT039_RS13560	PF09349	OHCU decarboxylase
RvVAT039_RS13560	PF01014	Uricase
RvVAT039_RS13565	PF08240	Alcohol dehydrogenase GroES-like domain
RvVAT039_RS13565	PF00107	Zinc-binding dehydrogenase
RvVAT039_RS13585	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS13600	PF05690	Thiazole biosynthesis protein ThiG
RvVAT039_RS13600	PF01266	FAD dependent oxidoreductase
RvVAT039_RS13605	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
RvVAT039_RS13605	PF01266	FAD dependent oxidoreductase
RvVAT039_RS13610	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS13610	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
RvVAT039_RS13610	PF00672	HAMP domain
RvVAT039_RS13610	PF01627	Hpt domain
RvVAT039_RS13610	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS13610	PF00072	Response regulator receiver domain
RvVAT039_RS13620	PF00270	DEAD/DEAH box helicase
RvVAT039_RS13620	PF00271	Helicase conserved C-terminal domain
RvVAT039_RS13625	PF05199	GMC oxidoreductase
RvVAT039_RS13625	PF00732	GMC oxidoreductase
RvVAT039_RS13630	PF00596	Class II Aldolase and Adducin N-terminal domain
RvVAT039_RS13630	PF00464	Serine hydroxymethyltransferase
RvVAT039_RS13635	PF01638	HxlR-like helix-turn-helix
RvVAT039_RS13650	PF07728	AAA domain (dynein-related subfamily)
RvVAT039_RS13665	PF05762	VWA domain containing CoxE-like protein
RvVAT039_RS13670	PF04434	SWIM zinc finger
RvVAT039_RS13680	PF00817	impB/mucB/samB family
RvVAT039_RS13680	PF11799	impB/mucB/samB family C-terminal domain
RvVAT039_RS13695	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
RvVAT039_RS13695	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
RvVAT039_RS13695	PF01276	Orn/Lys/Arg decarboxylase, major domain
RvVAT039_RS13755	PF04717	Type VI secretion system, phage-baseplate injector
RvVAT039_RS13775	PF12802	MarR family
RvVAT039_RS13785	PF00107	Zinc-binding dehydrogenase
RvVAT039_RS13785	PF08240	Alcohol dehydrogenase GroES-like domain
RvVAT039_RS13790	PF03466	LysR substrate binding domain
RvVAT039_RS13790	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS13800	PF14403	Circularly permuted ATP-grasp type 2 
RvVAT039_RS13800	PF04168	A predicted alpha-helical domain with a conserved ER motif.
RvVAT039_RS13805	PF14403	Circularly permuted ATP-grasp type 2 
RvVAT039_RS13810	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS13810	PF13426	PAS domain
RvVAT039_RS13810	PF08447	PAS fold
RvVAT039_RS13820	PF01152	Bacterial-like globin
RvVAT039_RS13840	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RvVAT039_RS13840	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
RvVAT039_RS13845	PF01180	Dihydroorotate dehydrogenase
RvVAT039_RS13850	PF03707	Bacterial signalling protein N terminal repeat
RvVAT039_RS13850	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS13850	PF00563	EAL domain
RvVAT039_RS13860	PF08362	YcdC-like protein, C-terminal region
RvVAT039_RS13860	PF00440	Bacterial regulatory proteins, tetR family
RvVAT039_RS13865	PF07687	Peptidase dimerisation domain
RvVAT039_RS13865	PF01546	Peptidase family M20/M25/M40
RvVAT039_RS13870	PF01979	Amidohydrolase family
RvVAT039_RS13880	PF00005	ABC transporter
RvVAT039_RS13885	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS13890	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS13905	PF00873	AcrB/AcrD/AcrF family
RvVAT039_RS13915	PF00753	Metallo-beta-lactamase superfamily
RvVAT039_RS13920	PF02492	CobW/HypB/UreG, nucleotide-binding domain
RvVAT039_RS13925	PF01730	UreF
RvVAT039_RS13930	PF05194	UreE urease accessory protein, C-terminal domain
RvVAT039_RS13930	PF02814	UreE urease accessory protein, N-terminal domain
RvVAT039_RS13935	PF00563	EAL domain
RvVAT039_RS13935	PF08448	PAS fold
RvVAT039_RS13935	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS13945	PF08534	Redoxin
RvVAT039_RS13960	PF01979	Amidohydrolase family
RvVAT039_RS13960	PF00449	Urease alpha-subunit, N-terminal domain
RvVAT039_RS13970	PF07007	Lysozyme inhibitor LprI
RvVAT039_RS13975	PF00699	Urease beta subunit
RvVAT039_RS13980	PF06906	Protein of unknown function (DUF1272)
RvVAT039_RS13985	PF00547	Urease, gamma subunit
RvVAT039_RS13990	PF01774	UreD urease accessory protein
RvVAT039_RS14005	PF00005	ABC transporter
RvVAT039_RS14010	PF00005	ABC transporter
RvVAT039_RS14010	PF12399	Branched-chain amino acid ATP-binding cassette transporter
RvVAT039_RS14020	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS14030	PF01126	Heme oxygenase
RvVAT039_RS14035	PF00360	Phytochrome region
RvVAT039_RS14035	PF01590	GAF domain
RvVAT039_RS14035	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS14035	PF08446	PAS fold
RvVAT039_RS14035	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS14045	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS14045	PF09308	LuxQ, periplasmic
RvVAT039_RS14045	PF00072	Response regulator receiver domain
RvVAT039_RS14045	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS14050	PF00072	Response regulator receiver domain
RvVAT039_RS14070	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
RvVAT039_RS14080	PF03776	Septum formation topological specificity factor MinE
RvVAT039_RS14085	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
RvVAT039_RS14090	PF03775	Septum formation inhibitor MinC, C-terminal domain
RvVAT039_RS14095	PF13458	Periplasmic binding protein
RvVAT039_RS14105	PF00005	ABC transporter
RvVAT039_RS14110	PF12399	Branched-chain amino acid ATP-binding cassette transporter
RvVAT039_RS14110	PF00005	ABC transporter
RvVAT039_RS14115	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS14115	PF11862	Domain of unknown function (DUF3382)
RvVAT039_RS14120	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS14130	PF00440	Bacterial regulatory proteins, tetR family
RvVAT039_RS14140	PF07690	Major Facilitator Superfamily
RvVAT039_RS14145	PF00009	Elongation factor Tu GTP binding domain
RvVAT039_RS14150	PF00459	Inositol monophosphatase family
RvVAT039_RS14160	PF02397	Bacterial sugar transferase
RvVAT039_RS14175	PF00072	Response regulator receiver domain
RvVAT039_RS14175	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS14180	PF00196	Bacterial regulatory proteins, luxR family
RvVAT039_RS14180	PF00072	Response regulator receiver domain
RvVAT039_RS14185	PF10090	Histidine phosphotransferase C-terminal domain
RvVAT039_RS14205	PF00588	SpoU rRNA Methylase family
RvVAT039_RS14215	PF00849	RNA pseudouridylate synthase
RvVAT039_RS14220	PF01266	FAD dependent oxidoreductase
RvVAT039_RS14220	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
RvVAT039_RS14225	PF00140	Sigma-70 factor, region 1.2
RvVAT039_RS14225	PF04542	Sigma-70 region 2 
RvVAT039_RS14225	PF04545	Sigma-70, region 4
RvVAT039_RS14235	PF02040	Arsenical pump membrane protein
RvVAT039_RS14240	PF07690	Major Facilitator Superfamily
RvVAT039_RS14250	PF00709	Adenylosuccinate synthetase
RvVAT039_RS14260	PF00149	Calcineurin-like phosphoesterase
RvVAT039_RS14265	PF02633	Creatinine amidohydrolase
RvVAT039_RS14270	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS14270	PF03466	LysR substrate binding domain
RvVAT039_RS14280	PF00005	ABC transporter
RvVAT039_RS14290	PF07969	Amidohydrolase family
RvVAT039_RS14300	PF02525	Flavodoxin-like fold
RvVAT039_RS14315	PF01042	Endoribonuclease L-PSP
RvVAT039_RS14320	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS14325	PF03167	Uracil DNA glycosylase superfamily
RvVAT039_RS14330	PF03328	HpcH/HpaI aldolase/citrate lyase family
RvVAT039_RS14360	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS14365	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS14370	PF00005	ABC transporter
RvVAT039_RS14370	PF08402	TOBE domain
RvVAT039_RS14380	PF01232	Mannitol dehydrogenase Rossmann domain
RvVAT039_RS14380	PF08125	Mannitol dehydrogenase C-terminal domain
RvVAT039_RS14385	PF13419	Haloacid dehalogenase-like hydrolase
RvVAT039_RS14390	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
RvVAT039_RS14390	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
RvVAT039_RS14540	PF05069	Phage virion morphogenesis family 
RvVAT039_RS14600	PF07352	Bacteriophage Mu Gam like protein
RvVAT039_RS14655	PF00593	TonB dependent receptor
RvVAT039_RS14655	PF07715	TonB-dependent Receptor Plug Domain
RvVAT039_RS14665	PF01032	FecCD transport family
RvVAT039_RS14675	PF00005	ABC transporter
RvVAT039_RS14685	PF07715	TonB-dependent Receptor Plug Domain
RvVAT039_RS14685	PF00593	TonB dependent receptor
RvVAT039_RS14710	PF02322	Cytochrome bd terminal oxidase subunit II
RvVAT039_RS14715	PF01654	Cytochrome bd terminal oxidase subunit I
RvVAT039_RS14725	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
RvVAT039_RS14725	PF01842	ACT domain
RvVAT039_RS14725	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
RvVAT039_RS14745	PF13505	Outer membrane protein beta-barrel domain
RvVAT039_RS14750	PF00296	Luciferase-like monooxygenase
RvVAT039_RS14755	PF02075	Crossover junction endodeoxyribonuclease RuvC
RvVAT039_RS14760	PF07499	RuvA, C-terminal domain
RvVAT039_RS14760	PF01330	RuvA N terminal domain
RvVAT039_RS14765	PF15937	prlF antitoxin for toxin YhaV_toxin
RvVAT039_RS14775	PF05491	RuvB C-terminal winged helix domain
RvVAT039_RS14775	PF05496	Holliday junction DNA helicase RuvB P-loop domain
RvVAT039_RS14775	PF17864	RuvB AAA lid domain
RvVAT039_RS14780	PF00149	Calcineurin-like phosphoesterase
RvVAT039_RS14780	PF10518	TAT (twin-arginine translocation) pathway signal sequence
RvVAT039_RS14785	PF00293	NUDIX domain
RvVAT039_RS14800	PF03061	Thioesterase superfamily
RvVAT039_RS14805	PF01618	MotA/TolQ/ExbB proton channel family
RvVAT039_RS14810	PF02472	Biopolymer transport protein ExbD/TolR
RvVAT039_RS14820	PF07676	WD40-like Beta Propeller Repeat
RvVAT039_RS14820	PF04052	TolB amino-terminal domain
RvVAT039_RS14825	PF00691	OmpA family
RvVAT039_RS14835	PF01171	PP-loop family
RvVAT039_RS14840	PF06480	FtsH Extracellular
RvVAT039_RS14840	PF17862	AAA+ lid domain
RvVAT039_RS14840	PF00004	ATPase family associated with various cellular activities (AAA)
RvVAT039_RS14840	PF01434	Peptidase family M41
RvVAT039_RS14850	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
RvVAT039_RS14850	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
RvVAT039_RS14850	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
RvVAT039_RS14850	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
RvVAT039_RS14855	PF01709	Transcriptional regulator
RvVAT039_RS14870	PF02080	TrkA-C domain
RvVAT039_RS14870	PF00999	Sodium/hydrogen exchanger family
RvVAT039_RS14870	PF03471	Transporter associated domain
RvVAT039_RS14900	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RvVAT039_RS14900	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
RvVAT039_RS14905	PF00456	Transketolase, thiamine diphosphate binding domain
RvVAT039_RS14905	PF02780	Transketolase, C-terminal domain
RvVAT039_RS14905	PF02779	Transketolase, pyrimidine binding domain
RvVAT039_RS14930	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS14930	PF00672	HAMP domain
RvVAT039_RS14935	PF01812	5-formyltetrahydrofolate cyclo-ligase family
RvVAT039_RS14940	PF13277	YmdB-like protein
RvVAT039_RS14945	PF00162	Phosphoglycerate kinase
RvVAT039_RS14950	PF00274	Fructose-bisphosphate aldolase class-I
RvVAT039_RS14955	PF02567	Phenazine biosynthesis-like protein
RvVAT039_RS14990	PF01197	Ribosomal protein L31
RvVAT039_RS14995	PF00005	ABC transporter
RvVAT039_RS14995	PF00664	ABC transporter transmembrane region
RvVAT039_RS15000	PF00890	FAD binding domain
RvVAT039_RS15005	PF00691	OmpA family
RvVAT039_RS15005	PF01389	OmpA-like transmembrane domain
RvVAT039_RS15015	PF00459	Inositol monophosphatase family
RvVAT039_RS15025	PF02581	Thiamine monophosphate synthase
RvVAT039_RS15035	PF01022	Bacterial regulatory protein, arsR family
RvVAT039_RS15050	PF00731	AIR carboxylase
RvVAT039_RS15055	PF02222	ATP-grasp domain
RvVAT039_RS15055	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
RvVAT039_RS15060	PF00444	Ribosomal protein L36
RvVAT039_RS15070	PF12697	Alpha/beta hydrolase family
RvVAT039_RS15075	PF00224	Pyruvate kinase, barrel domain
RvVAT039_RS15075	PF02887	Pyruvate kinase, alpha/beta domain
RvVAT039_RS15095	PF10073	Uncharacterized protein conserved in bacteria (DUF2312)
RvVAT039_RS15105	PF00072	Response regulator receiver domain
RvVAT039_RS15105	PF02954	Bacterial regulatory protein, Fis family
RvVAT039_RS15105	PF00158	Sigma-54 interaction domain
RvVAT039_RS15115	PF04715	Anthranilate synthase component I, N terminal region
RvVAT039_RS15115	PF00425	chorismate binding enzyme
RvVAT039_RS15115	PF00117	Glutamine amidotransferase class-I
RvVAT039_RS15120	PF01063	Amino-transferase class IV
RvVAT039_RS15130	PF03435	Saccharopine dehydrogenase NADP binding domain
RvVAT039_RS15130	PF16653	Saccharopine dehydrogenase C-terminal domain
RvVAT039_RS15140	PF00149	Calcineurin-like phosphoesterase
RvVAT039_RS15140	PF02872	5'-nucleotidase, C-terminal domain
RvVAT039_RS15145	PF00762	Ferrochelatase
RvVAT039_RS15150	PF01757	Acyltransferase family
RvVAT039_RS15155	PF02203	Tar ligand binding domain homologue
RvVAT039_RS15155	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS15155	PF00672	HAMP domain
RvVAT039_RS15165	PF04055	Radical SAM superfamily
RvVAT039_RS15170	PF01242	6-pyruvoyl tetrahydropterin synthase
RvVAT039_RS15175	PF06508	Queuosine biosynthesis protein QueC
RvVAT039_RS15180	PF01145	SPFH domain / Band 7 family
RvVAT039_RS15180	PF16200	C-terminal region of band_7
RvVAT039_RS15190	PF01380	SIS domain
RvVAT039_RS15190	PF00571	CBS domain
RvVAT039_RS15200	PF00483	Nucleotidyl transferase
RvVAT039_RS15205	PF13406	Transglycosylase SLT domain
RvVAT039_RS15215	PF02203	Tar ligand binding domain homologue
RvVAT039_RS15215	PF00672	HAMP domain
RvVAT039_RS15215	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS15220	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
RvVAT039_RS15220	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RvVAT039_RS15230	PF01850	PIN domain
RvVAT039_RS15240	PF01493	GXGXG motif
RvVAT039_RS15240	PF04898	Glutamate synthase central domain
RvVAT039_RS15240	PF01645	Conserved region in glutamate synthase
RvVAT039_RS15240	PF00310	Glutamine amidotransferases class-II
RvVAT039_RS15245	PF01212	Beta-eliminating lyase
RvVAT039_RS15250	PF00011	Hsp20/alpha crystallin family
RvVAT039_RS15265	PF00459	Inositol monophosphatase family
RvVAT039_RS15275	PF00072	Response regulator receiver domain
RvVAT039_RS15285	PF00924	Mechanosensitive ion channel
RvVAT039_RS15290	PF01050	Mannose-6-phosphate isomerase
RvVAT039_RS15290	PF00483	Nucleotidyl transferase
RvVAT039_RS15300	PF14403	Circularly permuted ATP-grasp type 2 
RvVAT039_RS15300	PF04168	A predicted alpha-helical domain with a conserved ER motif.
RvVAT039_RS15305	PF01841	Transglutaminase-like superfamily
RvVAT039_RS15305	PF08379	Bacterial transglutaminase-like N-terminal region
RvVAT039_RS15320	PF00343	Carbohydrate phosphorylase
RvVAT039_RS15325	PF02806	Alpha amylase, C-terminal all-beta domain
RvVAT039_RS15325	PF00128	Alpha amylase, catalytic domain
RvVAT039_RS15325	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
RvVAT039_RS15330	PF00483	Nucleotidyl transferase
RvVAT039_RS15335	PF00534	Glycosyl transferases group 1
RvVAT039_RS15335	PF08323	Starch synthase catalytic domain
RvVAT039_RS15340	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
RvVAT039_RS15340	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
RvVAT039_RS15340	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
RvVAT039_RS15340	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
RvVAT039_RS15345	PF18390	Glycogen debranching enzyme C-terminal domain
RvVAT039_RS15345	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
RvVAT039_RS15345	PF00128	Alpha amylase, catalytic domain
RvVAT039_RS15350	PF01575	MaoC like domain
RvVAT039_RS15360	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
RvVAT039_RS15365	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
RvVAT039_RS15385	PF01165	Ribosomal protein S21
RvVAT039_RS15390	PF01266	FAD dependent oxidoreductase
RvVAT039_RS15400	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RvVAT039_RS15400	PF17806	Sarcosine oxidase A3 domain
RvVAT039_RS15400	PF08669	Glycine cleavage T-protein C-terminal barrel domain
RvVAT039_RS15400	PF01571	Aminomethyltransferase folate-binding domain
RvVAT039_RS15405	PF04268	Sarcosine oxidase, gamma subunit family 
RvVAT039_RS15415	PF01638	HxlR-like helix-turn-helix
RvVAT039_RS15430	PF03480	Bacterial extracellular solute-binding protein, family 7
RvVAT039_RS15435	PF07722	Peptidase C26
RvVAT039_RS15440	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
RvVAT039_RS15440	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
RvVAT039_RS15445	PF00356	Bacterial regulatory proteins, lacI family
RvVAT039_RS15450	PF01047	MarR family
RvVAT039_RS15455	PF02633	Creatinine amidohydrolase
RvVAT039_RS15460	PF02492	CobW/HypB/UreG, nucleotide-binding domain
RvVAT039_RS15460	PF07683	Cobalamin synthesis protein cobW C-terminal domain
RvVAT039_RS15470	PF00672	HAMP domain
RvVAT039_RS15470	PF02203	Tar ligand binding domain homologue
RvVAT039_RS15470	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS15475	PF03922	OmpW family
RvVAT039_RS15485	PF03150	Di-haem cytochrome c peroxidase
RvVAT039_RS15495	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
RvVAT039_RS15495	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
RvVAT039_RS15500	PF03466	LysR substrate binding domain
RvVAT039_RS15500	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS15530	PF01081	KDPG and KHG aldolase
RvVAT039_RS15535	PF01928	CYTH domain
RvVAT039_RS15545	PF08279	HTH domain
RvVAT039_RS15545	PF13280	WYL domain
RvVAT039_RS15560	PF00563	EAL domain
RvVAT039_RS15560	PF13426	PAS domain
RvVAT039_RS15560	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS15570	PF00232	Glycosyl hydrolase family 1
RvVAT039_RS15580	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
RvVAT039_RS15580	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
RvVAT039_RS15590	PF01261	Xylose isomerase-like TIM barrel
RvVAT039_RS15595	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
RvVAT039_RS15595	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
RvVAT039_RS15600	PF00356	Bacterial regulatory proteins, lacI family
RvVAT039_RS15605	PF07690	Major Facilitator Superfamily
RvVAT039_RS15610	PF13533	Biotin-lipoyl like
RvVAT039_RS15615	PF00440	Bacterial regulatory proteins, tetR family
RvVAT039_RS15615	PF17922	Tetracyclin repressor-like, C-terminal domain
RvVAT039_RS15620	PF03741	Integral membrane protein TerC family
RvVAT039_RS15620	PF03471	Transporter associated domain
RvVAT039_RS15630	PF00730	HhH-GPD superfamily base excision DNA repair protein
RvVAT039_RS15630	PF00633	Helix-hairpin-helix motif
RvVAT039_RS15630	PF10576	Iron-sulfur binding domain of endonuclease III
RvVAT039_RS15640	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
RvVAT039_RS15640	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
RvVAT039_RS15660	PF13936	Helix-turn-helix domain
RvVAT039_RS15660	PF04198	Putative sugar-binding domain
RvVAT039_RS15665	PF00923	Transaldolase/Fructose-6-phosphate aldolase
RvVAT039_RS15685	PF01336	OB-fold nucleic acid binding domain
RvVAT039_RS15685	PF00152	tRNA synthetases class II (D, K and N) 
RvVAT039_RS15690	PF00749	tRNA synthetases class I (E and Q), catalytic domain
RvVAT039_RS15695	PF03600	Citrate transporter
RvVAT039_RS15695	PF02080	TrkA-C domain
RvVAT039_RS15710	PF03412	Peptidase C39 family
RvVAT039_RS15710	PF00664	ABC transporter transmembrane region
RvVAT039_RS15710	PF00005	ABC transporter
RvVAT039_RS15745	PF00005	ABC transporter
RvVAT039_RS15745	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS15750	PF01546	Peptidase family M20/M25/M40
RvVAT039_RS15750	PF07687	Peptidase dimerisation domain
RvVAT039_RS15755	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS15760	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS15765	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS15770	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS15770	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS15780	PF00005	ABC transporter
RvVAT039_RS15785	PF13533	Biotin-lipoyl like
RvVAT039_RS15790	PF03576	Peptidase family S58 
RvVAT039_RS15795	PF07969	Amidohydrolase family
RvVAT039_RS15805	PF00005	ABC transporter
RvVAT039_RS15805	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS15810	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS15810	PF00005	ABC transporter
RvVAT039_RS15820	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS15825	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS15830	PF01244	Membrane dipeptidase (Peptidase family M19)
RvVAT039_RS15835	PF00294	pfkB family carbohydrate kinase
RvVAT039_RS15840	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS15840	PF07729	FCD domain
RvVAT039_RS15845	PF02614	Glucuronate isomerase
RvVAT039_RS15850	PF07883	Cupin domain
RvVAT039_RS15855	PF04962	KduI/IolB family
RvVAT039_RS15865	PF08125	Mannitol dehydrogenase C-terminal domain
RvVAT039_RS15865	PF01232	Mannitol dehydrogenase Rossmann domain
RvVAT039_RS15870	PF03786	D-mannonate dehydratase (UxuA)
RvVAT039_RS15875	PF04295	D-galactarate dehydratase / Altronate hydrolase, C terminus
RvVAT039_RS15875	PF08666	SAF domain
RvVAT039_RS15885	PF02233	NAD(P) transhydrogenase beta subunit
RvVAT039_RS15890	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
RvVAT039_RS15890	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
RvVAT039_RS15890	PF12769	4TM region of pyridine nucleotide transhydrogenase, mitoch
RvVAT039_RS15895	PF03466	LysR substrate binding domain
RvVAT039_RS15895	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS15900	PF13407	Periplasmic binding protein domain
RvVAT039_RS15905	PF00005	ABC transporter
RvVAT039_RS15910	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS15920	PF00920	Dehydratase family
RvVAT039_RS15925	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
RvVAT039_RS15930	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS15935	PF05035	2-keto-3-deoxy-galactonokinase
RvVAT039_RS15940	PF01081	KDPG and KHG aldolase
RvVAT039_RS15945	PF04304	Protein of unknown function (DUF454)
RvVAT039_RS15950	PF00892	EamA-like transporter family
RvVAT039_RS15955	PF07729	FCD domain
RvVAT039_RS15955	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS15960	PF07690	Major Facilitator Superfamily
RvVAT039_RS15965	PF07703	Alpha-2-macroglobulin bait region domain
RvVAT039_RS15965	PF00207	Alpha-2-macroglobulin family
RvVAT039_RS15965	PF01835	MG2 domain
RvVAT039_RS15965	PF17970	Bacterial Alpha-2-macroglobulin MG1 domain 
RvVAT039_RS15965	PF17962	Bacterial macroglobulin domain 6
RvVAT039_RS15965	PF17973	Bacterial Alpha-2-macroglobulin MG10 domain
RvVAT039_RS15965	PF11974	Bacterial alpha-2-macroglobulin MG3 domain
RvVAT039_RS15965	PF17972	Bacterial Alpha-2-macroglobulin MG5 domain
RvVAT039_RS15970	PF06832	Penicillin-Binding Protein C-terminus Family
RvVAT039_RS15970	PF00912	Transglycosylase
RvVAT039_RS15970	PF00905	Penicillin binding protein transpeptidase domain
RvVAT039_RS15975	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS15975	PF00672	HAMP domain
RvVAT039_RS15980	PF16363	GDP-mannose 4,6 dehydratase
RvVAT039_RS15985	PF03033	Glycosyltransferase family 28 N-terminal domain
RvVAT039_RS15985	PF04101	Glycosyltransferase family 28 C-terminal domain
RvVAT039_RS15990	PF00534	Glycosyl transferases group 1
RvVAT039_RS15990	PF13439	Glycosyltransferase Family 4
RvVAT039_RS16000	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS16000	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS16005	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS16010	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS16015	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS16015	PF00005	ABC transporter
RvVAT039_RS16030	PF00534	Glycosyl transferases group 1
RvVAT039_RS16030	PF13439	Glycosyltransferase Family 4
RvVAT039_RS16035	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
RvVAT039_RS16035	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
RvVAT039_RS16035	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
RvVAT039_RS16050	PF03412	Peptidase C39 family
RvVAT039_RS16050	PF00005	ABC transporter
RvVAT039_RS16050	PF00664	ABC transporter transmembrane region
RvVAT039_RS16055	PF00149	Calcineurin-like phosphoesterase
RvVAT039_RS16055	PF12320	Type 5 capsule protein repressor C-terminal domain
RvVAT039_RS16060	PF13476	AAA domain
RvVAT039_RS16065	PF00672	HAMP domain
RvVAT039_RS16065	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS16065	PF02203	Tar ligand binding domain homologue
RvVAT039_RS16105	PF01259	SAICAR synthetase
RvVAT039_RS16110	PF08361	MAATS-type transcriptional repressor, C-terminal region
RvVAT039_RS16110	PF00440	Bacterial regulatory proteins, tetR family
RvVAT039_RS16115	PF00529	HlyD membrane-fusion protein of T1SS
RvVAT039_RS16115	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
RvVAT039_RS16120	PF00873	AcrB/AcrD/AcrF family
RvVAT039_RS16125	PF02321	Outer membrane efflux protein
RvVAT039_RS16130	PF09285	Elongation factor P, C-terminal
RvVAT039_RS16130	PF08207	Elongation factor P (EF-P) KOW-like domain
RvVAT039_RS16130	PF01132	Elongation factor P (EF-P) OB domain
RvVAT039_RS16135	PF00152	tRNA synthetases class II (D, K and N) 
RvVAT039_RS16140	PF04055	Radical SAM superfamily
RvVAT039_RS16140	PF12544	Lysine-2,3-aminomutase 
RvVAT039_RS16145	PF00550	Phosphopantetheine attachment site
RvVAT039_RS16185	PF00534	Glycosyl transferases group 1
RvVAT039_RS16185	PF13439	Glycosyltransferase Family 4
RvVAT039_RS16200	PF00150	Cellulase (glycosyl hydrolase family 5)
RvVAT039_RS16205	PF00551	Formyl transferase
RvVAT039_RS16210	PF00202	Aminotransferase class-III
RvVAT039_RS16225	PF04675	DNA ligase N terminus
RvVAT039_RS16225	PF01068	ATP dependent DNA ligase domain
RvVAT039_RS16225	PF04679	ATP dependent DNA ligase C terminal region        
RvVAT039_RS16245	PF00210	Ferritin-like domain
RvVAT039_RS16255	PF00072	Response regulator receiver domain
RvVAT039_RS16260	PF07536	HWE histidine kinase
RvVAT039_RS16260	PF08447	PAS fold
RvVAT039_RS16260	PF13426	PAS domain
RvVAT039_RS16265	PF15887	Putative zinc-binding metallo-peptidase
RvVAT039_RS16265	PF10005	zinc-ribbon domain
RvVAT039_RS16285	PF08281	Sigma-70, region 4
RvVAT039_RS16285	PF04542	Sigma-70 region 2 
RvVAT039_RS16295	PF13545	Crp-like helix-turn-helix domain
RvVAT039_RS16295	PF00027	Cyclic nucleotide-binding domain
RvVAT039_RS16305	PF01618	MotA/TolQ/ExbB proton channel family
RvVAT039_RS16310	PF02472	Biopolymer transport protein ExbD/TolR
RvVAT039_RS16320	PF07470	Glycosyl Hydrolase Family 88
RvVAT039_RS16325	PF01679	Proteolipid membrane potential modulator
RvVAT039_RS16330	PF02423	Ornithine cyclodeaminase/mu-crystallin family
RvVAT039_RS16335	PF00491	Arginase family
RvVAT039_RS16355	PF00480	ROK family
RvVAT039_RS16360	PF13407	Periplasmic binding protein domain
RvVAT039_RS16365	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS16370	PF00005	ABC transporter
RvVAT039_RS16375	PF00485	Phosphoribulokinase / Uridine kinase family
RvVAT039_RS16380	PF00497	Bacterial extracellular solute-binding proteins, family 3
RvVAT039_RS16385	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS16390	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS16395	PF00005	ABC transporter
RvVAT039_RS16405	PF00296	Luciferase-like monooxygenase
RvVAT039_RS16410	PF01979	Amidohydrolase family
RvVAT039_RS16415	PF01979	Amidohydrolase family
RvVAT039_RS16420	PF00221	Aromatic amino acid lyase
RvVAT039_RS16430	PF01175	Urocanase Rossmann-like domain
RvVAT039_RS16430	PF17391	Urocanase N-terminal domain
RvVAT039_RS16430	PF17392	Urocanase C-terminal domain
RvVAT039_RS16435	PF05962	HutD
RvVAT039_RS16445	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS16450	PF04632	Fusaric acid resistance protein family
RvVAT039_RS16455	PF03055	Retinal pigment epithelial membrane protein
RvVAT039_RS16465	PF02563	Polysaccharide biosynthesis/export protein
RvVAT039_RS16470	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS16470	PF03466	LysR substrate binding domain
RvVAT039_RS16475	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
RvVAT039_RS16490	PF13533	Biotin-lipoyl like
RvVAT039_RS16495	PF00005	ABC transporter
RvVAT039_RS16500	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS16505	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS16510	PF00497	Bacterial extracellular solute-binding proteins, family 3
RvVAT039_RS16515	PF03737	Aldolase/RraA
RvVAT039_RS16520	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS16520	PF03466	LysR substrate binding domain
RvVAT039_RS16525	PF01557	Fumarylacetoacetate (FAA) hydrolase family
RvVAT039_RS16535	PF00975	Thioesterase domain
RvVAT039_RS16535	PF00550	Phosphopantetheine attachment site
RvVAT039_RS16535	PF00668	Condensation domain
RvVAT039_RS16535	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS16535	PF00501	AMP-binding enzyme
RvVAT039_RS16540	PF01370	NAD dependent epimerase/dehydratase family
RvVAT039_RS16550	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS16550	PF00005	ABC transporter
RvVAT039_RS16555	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS16555	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS16560	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS16565	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS16570	PF00701	Dihydrodipicolinate synthetase family
RvVAT039_RS16575	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS16575	PF07729	FCD domain
RvVAT039_RS16590	PF06964	Alpha-L-arabinofuranosidase C-terminal domain
RvVAT039_RS16595	PF00005	ABC transporter
RvVAT039_RS16595	PF03459	TOBE domain
RvVAT039_RS16595	PF17912	MalK OB fold domain
RvVAT039_RS16600	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS16605	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS16610	PF01547	Bacterial extracellular solute-binding protein
RvVAT039_RS16615	PF00885	6,7-dimethyl-8-ribityllumazine synthase
RvVAT039_RS16620	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS16620	PF03466	LysR substrate binding domain
RvVAT039_RS16625	PF01266	FAD dependent oxidoreductase
RvVAT039_RS16630	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS16635	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
RvVAT039_RS16635	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
RvVAT039_RS16645	PF08450	SMP-30/Gluconolactonase/LRE-like region
RvVAT039_RS16650	PF03033	Glycosyltransferase family 28 N-terminal domain
RvVAT039_RS16655	PF00196	Bacterial regulatory proteins, luxR family
RvVAT039_RS16655	PF03472	Autoinducer binding domain
RvVAT039_RS16660	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
RvVAT039_RS16660	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
RvVAT039_RS16665	PF01053	Cys/Met metabolism PLP-dependent enzyme
RvVAT039_RS16680	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS16680	PF00668	Condensation domain
RvVAT039_RS16680	PF00550	Phosphopantetheine attachment site
RvVAT039_RS16680	PF00975	Thioesterase domain
RvVAT039_RS16680	PF00501	AMP-binding enzyme
RvVAT039_RS16685	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
RvVAT039_RS16715	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS16720	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS16725	PF16874	Glycosyl hydrolase family 36 C-terminal domain
RvVAT039_RS16725	PF16875	Glycosyl hydrolase family 36 N-terminal domain
RvVAT039_RS16730	PF00005	ABC transporter
RvVAT039_RS16730	PF17912	MalK OB fold domain
RvVAT039_RS16735	PF08532	Beta-galactosidase trimerisation domain
RvVAT039_RS16735	PF02449	Beta-galactosidase
RvVAT039_RS16735	PF08533	Beta-galactosidase C-terminal domain
RvVAT039_RS16745	PF17806	Sarcosine oxidase A3 domain
RvVAT039_RS16745	PF08669	Glycine cleavage T-protein C-terminal barrel domain
RvVAT039_RS16745	PF01571	Aminomethyltransferase folate-binding domain
RvVAT039_RS16745	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RvVAT039_RS16750	PF04267	Sarcosine oxidase, delta subunit family 
RvVAT039_RS16755	PF01266	FAD dependent oxidoreductase
RvVAT039_RS16760	PF12833	Helix-turn-helix domain
RvVAT039_RS16760	PF01965	DJ-1/PfpI family
RvVAT039_RS16775	PF01493	GXGXG motif
RvVAT039_RS16780	PF01645	Conserved region in glutamate synthase
RvVAT039_RS16785	PF00120	Glutamine synthetase, catalytic domain
RvVAT039_RS16790	PF07690	Major Facilitator Superfamily
RvVAT039_RS16795	PF01070	FMN-dependent dehydrogenase
RvVAT039_RS16800	PF01547	Bacterial extracellular solute-binding protein
RvVAT039_RS16810	PF07470	Glycosyl Hydrolase Family 88
RvVAT039_RS16820	PF08402	TOBE domain
RvVAT039_RS16820	PF00005	ABC transporter
RvVAT039_RS16825	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS16830	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS16835	PF00356	Bacterial regulatory proteins, lacI family
RvVAT039_RS16845	PF08240	Alcohol dehydrogenase GroES-like domain
RvVAT039_RS16845	PF00107	Zinc-binding dehydrogenase
RvVAT039_RS16850	PF01738	Dienelactone hydrolase family
RvVAT039_RS16855	PF00571	CBS domain
RvVAT039_RS16855	PF00478	IMP dehydrogenase / GMP reductase domain
RvVAT039_RS16860	PF03466	LysR substrate binding domain
RvVAT039_RS16860	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS16870	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS16870	PF03466	LysR substrate binding domain
RvVAT039_RS16890	PF04452	RNA methyltransferase
RvVAT039_RS16895	PF01384	Phosphate transporter family
RvVAT039_RS16910	PF02913	FAD linked oxidases, C-terminal domain
RvVAT039_RS16910	PF01565	FAD binding domain 
RvVAT039_RS16915	PF01565	FAD binding domain 
RvVAT039_RS16920	PF13183	4Fe-4S dicluster domain
RvVAT039_RS16920	PF02754	Cysteine-rich domain
RvVAT039_RS16930	PF02798	Glutathione S-transferase, N-terminal domain
RvVAT039_RS16930	PF00043	Glutathione S-transferase, C-terminal domain
RvVAT039_RS16940	PF01634	ATP phosphoribosyltransferase
RvVAT039_RS16945	PF13393	Histidyl-tRNA synthetase
RvVAT039_RS16955	PF04480	Protein of unknown function (DUF559)
RvVAT039_RS16960	PF03129	Anticodon binding domain
RvVAT039_RS16960	PF13393	Histidyl-tRNA synthetase
RvVAT039_RS16990	PF03352	Methyladenine glycosylase
RvVAT039_RS16995	PF03734	L,D-transpeptidase catalytic domain
RvVAT039_RS16995	PF17969	L,D-transpeptidase C-terminal domain
RvVAT039_RS16995	PF01476	LysM domain
RvVAT039_RS17000	PF17969	L,D-transpeptidase C-terminal domain
RvVAT039_RS17000	PF01476	LysM domain
RvVAT039_RS17000	PF03734	L,D-transpeptidase catalytic domain
RvVAT039_RS17005	PF00196	Bacterial regulatory proteins, luxR family
RvVAT039_RS17005	PF17874	MalT-like TPR region
RvVAT039_RS17010	PF17837	4'-phosphopantetheinyl transferase N-terminal domain
RvVAT039_RS17010	PF01648	4'-phosphopantetheinyl transferase superfamily
RvVAT039_RS17015	PF02631	RecX family
RvVAT039_RS17020	PF16884	N-terminal domain of oxidoreductase
RvVAT039_RS17020	PF00107	Zinc-binding dehydrogenase
RvVAT039_RS17035	PF08264	Anticodon-binding domain of tRNA
RvVAT039_RS17035	PF00133	tRNA synthetases class I (I, L, M and V)
RvVAT039_RS17040	PF00474	Sodium:solute symporter family
RvVAT039_RS17050	PF01687	Riboflavin kinase
RvVAT039_RS17050	PF06574	FAD synthetase
RvVAT039_RS17060	PF02417	Chromate transporter
RvVAT039_RS17065	PF00166	Chaperonin 10 Kd subunit
RvVAT039_RS17070	PF00118	TCP-1/cpn60 chaperonin family
RvVAT039_RS17085	PF05378	Hydantoinase/oxoprolinase N-terminal region
RvVAT039_RS17085	PF01968	Hydantoinase/oxoprolinase
RvVAT039_RS17090	PF08402	TOBE domain
RvVAT039_RS17090	PF00005	ABC transporter
RvVAT039_RS17100	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS17105	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS17110	PF02219	Methylenetetrahydrofolate reductase
RvVAT039_RS17115	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
RvVAT039_RS17120	PF16653	Saccharopine dehydrogenase C-terminal domain
RvVAT039_RS17120	PF03435	Saccharopine dehydrogenase NADP binding domain
RvVAT039_RS17125	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
RvVAT039_RS17125	PF00364	Biotin-requiring enzyme
RvVAT039_RS17125	PF02785	Biotin carboxylase C-terminal domain
RvVAT039_RS17125	PF00289	Biotin carboxylase, N-terminal domain
RvVAT039_RS17130	PF02682	Carboxyltransferase domain, subdomain C and D
RvVAT039_RS17135	PF07286	Protein of unknown function (DUF1445)
RvVAT039_RS17140	PF03746	LamB/YcsF family
RvVAT039_RS17145	PF01566	Natural resistance-associated macrophage protein
RvVAT039_RS17150	PF07729	FCD domain
RvVAT039_RS17150	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS17155	PF01037	Lrp/AsnC ligand binding domain
RvVAT039_RS17160	PF00291	Pyridoxal-phosphate dependent enzyme
RvVAT039_RS17175	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
RvVAT039_RS17180	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS17185	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS17185	PF03466	LysR substrate binding domain
RvVAT039_RS17190	PF03746	LamB/YcsF family
RvVAT039_RS17195	PF00364	Biotin-requiring enzyme
RvVAT039_RS17200	PF02785	Biotin carboxylase C-terminal domain
RvVAT039_RS17200	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
RvVAT039_RS17200	PF00289	Biotin carboxylase, N-terminal domain
RvVAT039_RS17210	PF02626	Carboxyltransferase domain, subdomain A and B 
RvVAT039_RS17220	PF08402	TOBE domain
RvVAT039_RS17220	PF00005	ABC transporter
RvVAT039_RS17225	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS17250	PF08402	TOBE domain
RvVAT039_RS17250	PF00005	ABC transporter
RvVAT039_RS17255	PF01522	Polysaccharide deacetylase
RvVAT039_RS17265	PF07683	Cobalamin synthesis protein cobW C-terminal domain
RvVAT039_RS17265	PF02492	CobW/HypB/UreG, nucleotide-binding domain
RvVAT039_RS17275	PF01425	Amidase
RvVAT039_RS17280	PF01037	Lrp/AsnC ligand binding domain
RvVAT039_RS17285	PF01266	FAD dependent oxidoreductase
RvVAT039_RS17290	PF00916	Sulfate permease family
RvVAT039_RS17290	PF01740	STAS domain
RvVAT039_RS17295	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
RvVAT039_RS17295	PF10414	Sirohaem synthase dimerisation region
RvVAT039_RS17295	PF14824	Sirohaem biosynthesis protein central
RvVAT039_RS17300	PF01568	Molydopterin dinucleotide binding domain
RvVAT039_RS17300	PF00384	Molybdopterin oxidoreductase
RvVAT039_RS17300	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
RvVAT039_RS17300	PF04324	BFD-like [2Fe-2S] binding domain
RvVAT039_RS17310	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RvVAT039_RS17310	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
RvVAT039_RS17310	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
RvVAT039_RS17310	PF18267	Rubredoxin NAD+ reductase C-terminal domain
RvVAT039_RS17310	PF04324	BFD-like [2Fe-2S] binding domain
RvVAT039_RS17315	PF00005	ABC transporter
RvVAT039_RS17320	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS17335	PF03861	ANTAR domain
RvVAT039_RS17335	PF08376	Nitrate and nitrite sensing
RvVAT039_RS17355	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS17355	PF03466	LysR substrate binding domain
RvVAT039_RS17360	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
RvVAT039_RS17360	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
RvVAT039_RS17360	PF02770	Acyl-CoA dehydrogenase, middle domain
RvVAT039_RS17365	PF02515	CoA-transferase family III
RvVAT039_RS17375	PF03576	Peptidase family S58 
RvVAT039_RS17380	PF01063	Amino-transferase class IV
RvVAT039_RS17385	PF00144	Beta-lactamase
RvVAT039_RS17390	PF01244	Membrane dipeptidase (Peptidase family M19)
RvVAT039_RS17395	PF13667	ThiC-associated domain 
RvVAT039_RS17395	PF01964	Radical SAM ThiC family
RvVAT039_RS17400	PF01266	FAD dependent oxidoreductase
RvVAT039_RS17410	PF05690	Thiazole biosynthesis protein ThiG
RvVAT039_RS17415	PF02581	Thiamine monophosphate synthase
RvVAT039_RS17455	PF02563	Polysaccharide biosynthesis/export protein
RvVAT039_RS17460	PF00069	Protein kinase domain
RvVAT039_RS17475	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
RvVAT039_RS17475	PF00691	OmpA family
RvVAT039_RS17530	PF00004	ATPase family associated with various cellular activities (AAA)
RvVAT039_RS17530	PF10431	C-terminal, D2-small domain, of ClpB protein 
RvVAT039_RS17530	PF17871	AAA lid domain
RvVAT039_RS17530	PF07724	AAA domain (Cdc48 subfamily)
RvVAT039_RS17550	PF02355	Protein export membrane protein
RvVAT039_RS17550	PF07549	SecD/SecF GG Motif
RvVAT039_RS17560	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
RvVAT039_RS17560	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
RvVAT039_RS17565	PF00296	Luciferase-like monooxygenase
RvVAT039_RS17580	PF01758	Sodium Bile acid symporter family
RvVAT039_RS17585	PF03960	ArsC family
RvVAT039_RS17590	PF03358	NADPH-dependent FMN reductase
RvVAT039_RS17630	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS17630	PF00072	Response regulator receiver domain
RvVAT039_RS17635	PF02702	Osmosensitive K+ channel His kinase sensor domain
RvVAT039_RS17635	PF13493	Domain of unknown function (DUF4118)
RvVAT039_RS17635	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS17635	PF13492	GAF domain
RvVAT039_RS17635	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS17640	PF02669	K+-transporting ATPase, c chain
RvVAT039_RS17650	PF03814	Potassium-transporting ATPase A subunit
RvVAT039_RS17665	PF00570	HRDC domain
RvVAT039_RS17665	PF09382	RQC domain
RvVAT039_RS17665	PF16124	RecQ zinc-binding
RvVAT039_RS17665	PF00271	Helicase conserved C-terminal domain
RvVAT039_RS17665	PF00270	DEAD/DEAH box helicase
RvVAT039_RS17670	PF01494	FAD binding domain
RvVAT039_RS17675	PF01266	FAD dependent oxidoreductase
RvVAT039_RS17680	PF00842	Alanine racemase, C-terminal domain
RvVAT039_RS17680	PF01168	Alanine racemase, N-terminal domain
RvVAT039_RS17685	PF01037	Lrp/AsnC ligand binding domain
RvVAT039_RS17690	PF07729	FCD domain
RvVAT039_RS17690	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS17700	PF12697	Alpha/beta hydrolase family
RvVAT039_RS17705	PF01613	Flavin reductase like domain
RvVAT039_RS17710	PF00296	Luciferase-like monooxygenase
RvVAT039_RS17715	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS17725	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS17730	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS17735	PF08402	TOBE domain
RvVAT039_RS17735	PF00005	ABC transporter
RvVAT039_RS17740	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS17745	PF13407	Periplasmic binding protein domain
RvVAT039_RS17750	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS17755	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS17760	PF00005	ABC transporter
RvVAT039_RS17770	PF05025	RbsD / FucU transport protein family
RvVAT039_RS17775	PF00248	Aldo/keto reductase family
RvVAT039_RS17780	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS17785	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS17790	PF00005	ABC transporter
RvVAT039_RS17795	PF13407	Periplasmic binding protein domain
RvVAT039_RS17800	PF00465	Iron-containing alcohol dehydrogenase 
RvVAT039_RS17805	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS17805	PF07729	FCD domain
RvVAT039_RS17810	PF04295	D-galactarate dehydratase / Altronate hydrolase, C terminus
RvVAT039_RS17810	PF08666	SAF domain
RvVAT039_RS17825	PF00465	Iron-containing alcohol dehydrogenase 
RvVAT039_RS17830	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS17830	PF00672	HAMP domain
RvVAT039_RS17830	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS17835	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS17835	PF00072	Response regulator receiver domain
RvVAT039_RS17845	PF03401	Tripartite tricarboxylate transporter family receptor
RvVAT039_RS17855	PF01970	Tripartite tricarboxylate transporter TctA family
RvVAT039_RS17870	PF00108	Thiolase, N-terminal domain
RvVAT039_RS17870	PF02803	Thiolase, C-terminal domain
RvVAT039_RS17875	PF01144	Coenzyme A transferase
RvVAT039_RS17880	PF01144	Coenzyme A transferase
RvVAT039_RS17885	PF09339	IclR helix-turn-helix domain
RvVAT039_RS17885	PF01614	Bacterial transcriptional regulator
RvVAT039_RS17895	PF01494	FAD binding domain
RvVAT039_RS17900	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS17900	PF03466	LysR substrate binding domain
RvVAT039_RS17905	PF00561	alpha/beta hydrolase fold
RvVAT039_RS17910	PF02627	Carboxymuconolactone decarboxylase family
RvVAT039_RS17915	PF00775	Dioxygenase
RvVAT039_RS17915	PF12391	Protocatechuate 3,4-dioxygenase beta subunit N terminal
RvVAT039_RS17920	PF00775	Dioxygenase
RvVAT039_RS17925	PF10397	Adenylosuccinate lyase C-terminus
RvVAT039_RS17925	PF00206	Lyase
RvVAT039_RS17930	PF00107	Zinc-binding dehydrogenase
RvVAT039_RS17935	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
RvVAT039_RS17935	PF09397	Ftsk gamma domain
RvVAT039_RS17935	PF17854	FtsK alpha domain
RvVAT039_RS17935	PF01580	FtsK/SpoIIIE family
RvVAT039_RS17940	PF00005	ABC transporter
RvVAT039_RS17940	PF08402	TOBE domain
RvVAT039_RS17945	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS17955	PF00924	Mechanosensitive ion channel
RvVAT039_RS17960	PF07886	BA14K-like protein
RvVAT039_RS17975	PF00005	ABC transporter
RvVAT039_RS17975	PF00664	ABC transporter transmembrane region
RvVAT039_RS17980	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS17980	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS17980	PF16527	Two-component sensor protein CpxA, periplasmic domain
RvVAT039_RS17980	PF00672	HAMP domain
RvVAT039_RS17985	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS17985	PF00072	Response regulator receiver domain
RvVAT039_RS18000	PF00589	Phage integrase family
RvVAT039_RS18000	PF13356	Arm DNA-binding domain
RvVAT039_RS18185	PF10073	Uncharacterized protein conserved in bacteria (DUF2312)
RvVAT039_RS18225	PF01381	Helix-turn-helix
RvVAT039_RS18355	PF02104	SURF1 family
RvVAT039_RS18360	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
RvVAT039_RS18365	PF00510	Cytochrome c oxidase subunit III
RvVAT039_RS18370	PF00115	Cytochrome C and Quinol oxidase polypeptide I
RvVAT039_RS18375	PF06481	COX Aromatic Rich Motif
RvVAT039_RS18375	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
RvVAT039_RS18380	PF04542	Sigma-70 region 2 
RvVAT039_RS18380	PF08281	Sigma-70, region 4
RvVAT039_RS18390	PF01027	Inhibitor of apoptosis-promoting Bax1
RvVAT039_RS18395	PF00127	Copper binding proteins, plastocyanin/azurin family
RvVAT039_RS18405	PF00353	RTX calcium-binding nonapeptide repeat (4 copies)
RvVAT039_RS18405	PF00722	Glycosyl hydrolases family 16
RvVAT039_RS18410	PF00375	Sodium:dicarboxylate symporter family
RvVAT039_RS18415	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS18415	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS18415	PF02743	Cache domain
RvVAT039_RS18420	PF00158	Sigma-54 interaction domain
RvVAT039_RS18420	PF00072	Response regulator receiver domain
RvVAT039_RS18420	PF02954	Bacterial regulatory protein, Fis family
RvVAT039_RS18425	PF17938	Tetracyclin repressor-like, C-terminal domain
RvVAT039_RS18425	PF00440	Bacterial regulatory proteins, tetR family
RvVAT039_RS18440	PF00480	ROK family
RvVAT039_RS18445	PF01979	Amidohydrolase family
RvVAT039_RS18450	PF01380	SIS domain
RvVAT039_RS18455	PF07702	UTRA domain
RvVAT039_RS18455	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS18465	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS18470	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS18475	PF01547	Bacterial extracellular solute-binding protein
RvVAT039_RS18480	PF00005	ABC transporter
RvVAT039_RS18480	PF08402	TOBE domain
RvVAT039_RS18485	PF14031	Putative serine dehydratase domain
RvVAT039_RS18485	PF01168	Alanine racemase, N-terminal domain
RvVAT039_RS18490	PF07171	MlrC C-terminus
RvVAT039_RS18490	PF07364	Metallopeptidase family M81
RvVAT039_RS18505	PF01380	SIS domain
RvVAT039_RS18505	PF01418	Helix-turn-helix domain, rpiR family
RvVAT039_RS18505	PF02685	Glucokinase
RvVAT039_RS18515	PF02838	Glycosyl hydrolase family 20, domain 2
RvVAT039_RS18515	PF00728	Glycosyl hydrolase family 20, catalytic domain
RvVAT039_RS18525	PF07690	Major Facilitator Superfamily
RvVAT039_RS18530	PF03932	CutC family
RvVAT039_RS18535	PF03061	Thioesterase superfamily
RvVAT039_RS18540	PF00440	Bacterial regulatory proteins, tetR family
RvVAT039_RS18545	PF00933	Glycosyl hydrolase family 3 N terminal domain
RvVAT039_RS18545	PF14310	Fibronectin type III-like domain
RvVAT039_RS18545	PF01915	Glycosyl hydrolase family 3 C-terminal domain
RvVAT039_RS18545	PF07691	PA14 domain
RvVAT039_RS18550	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS18550	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS18550	PF08521	Two-component sensor kinase N-terminal
RvVAT039_RS18555	PF00072	Response regulator receiver domain
RvVAT039_RS18555	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS18570	PF01261	Xylose isomerase-like TIM barrel
RvVAT039_RS18575	PF00596	Class II Aldolase and Adducin N-terminal domain
RvVAT039_RS18580	PF00455	DeoR C terminal sensor domain
RvVAT039_RS18580	PF08220	DeoR-like helix-turn-helix domain
RvVAT039_RS18585	PF13407	Periplasmic binding protein domain
RvVAT039_RS18590	PF00005	ABC transporter
RvVAT039_RS18595	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS18600	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS18605	PF05336	L-rhamnose mutarotase
RvVAT039_RS18615	PF01557	Fumarylacetoacetate (FAA) hydrolase family
RvVAT039_RS18620	PF08447	PAS fold
RvVAT039_RS18620	PF08448	PAS fold
RvVAT039_RS18620	PF00563	EAL domain
RvVAT039_RS18620	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS18625	PF01177	Asp/Glu/Hydantoin racemase
RvVAT039_RS18630	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS18635	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS18645	PF08402	TOBE domain
RvVAT039_RS18645	PF00005	ABC transporter
RvVAT039_RS18665	PF02245	Methylpurine-DNA glycosylase (MPG)
RvVAT039_RS18670	PF00005	ABC transporter
RvVAT039_RS18685	PF06751	Ethanolamine ammonia lyase large subunit (EutB)
RvVAT039_RS18690	PF05985	Ethanolamine ammonia-lyase light chain (EutC)
RvVAT039_RS18695	PF13614	AAA domain
RvVAT039_RS18700	PF07506	RepB plasmid partitioning protein
RvVAT039_RS18700	PF02195	ParB-like nuclease domain
RvVAT039_RS18705	PF11800	Replication protein C C-terminal region
RvVAT039_RS18705	PF03428	Replication protein C N-terminal domain
RvVAT039_RS18710	PF13091	PLD-like domain
RvVAT039_RS18715	PF03706	Lysylphosphatidylglycerol synthase TM region
RvVAT039_RS18725	PF05899	Protein of unknown function (DUF861)
RvVAT039_RS18725	PF07883	Cupin domain
RvVAT039_RS18745	PF01037	Lrp/AsnC ligand binding domain
RvVAT039_RS18750	PF00005	ABC transporter
RvVAT039_RS18755	PF00497	Bacterial extracellular solute-binding proteins, family 3
RvVAT039_RS18760	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS18765	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS18770	PF02574	Homocysteine S-methyltransferase
RvVAT039_RS18775	PF01032	FecCD transport family
RvVAT039_RS18785	PF00005	ABC transporter
RvVAT039_RS18790	PF01546	Peptidase family M20/M25/M40
RvVAT039_RS18800	PF08323	Starch synthase catalytic domain
RvVAT039_RS18800	PF00534	Glycosyl transferases group 1
RvVAT039_RS18820	PF13593	SBF-like CPA transporter family (DUF4137)
RvVAT039_RS18825	PF08240	Alcohol dehydrogenase GroES-like domain
RvVAT039_RS18825	PF00107	Zinc-binding dehydrogenase
RvVAT039_RS18830	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
RvVAT039_RS18830	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
RvVAT039_RS18840	PF01202	Shikimate kinase
RvVAT039_RS18845	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
RvVAT039_RS18845	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
RvVAT039_RS18855	PF00356	Bacterial regulatory proteins, lacI family
RvVAT039_RS18865	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS18870	PF00005	ABC transporter
RvVAT039_RS18880	PF07756	Protein of unknown function (DUF1612)
RvVAT039_RS18880	PF11972	HTH DNA binding domain
RvVAT039_RS18885	PF13407	Periplasmic binding protein domain
RvVAT039_RS18890	PF00005	ABC transporter
RvVAT039_RS18895	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS18900	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS18905	PF07729	FCD domain
RvVAT039_RS18905	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS18910	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS18915	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS18925	PF03737	Aldolase/RraA
RvVAT039_RS18930	PF00920	Dehydratase family
RvVAT039_RS18935	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS18940	PF00005	ABC transporter
RvVAT039_RS18950	PF07729	FCD domain
RvVAT039_RS18950	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS18955	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
RvVAT039_RS18960	PF00881	Nitroreductase family
RvVAT039_RS18975	PF01740	STAS domain
RvVAT039_RS18975	PF00916	Sulfate permease family
RvVAT039_RS18980	PF00582	Universal stress protein family
RvVAT039_RS18995	PF00440	Bacterial regulatory proteins, tetR family
RvVAT039_RS18995	PF16859	Tetracyclin repressor-like, C-terminal domain
RvVAT039_RS19000	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
RvVAT039_RS19015	PF01613	Flavin reductase like domain
RvVAT039_RS19035	PF01557	Fumarylacetoacetate (FAA) hydrolase family
RvVAT039_RS19045	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS19045	PF07729	FCD domain
RvVAT039_RS19050	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS19055	PF00232	Glycosyl hydrolase family 1
RvVAT039_RS19060	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS19065	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS19065	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS19070	PF01979	Amidohydrolase family
RvVAT039_RS19085	PF03841	L-seryl-tRNA selenium transferase
RvVAT039_RS19090	PF00563	EAL domain
RvVAT039_RS19090	PF01590	GAF domain
RvVAT039_RS19090	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS19090	PF00360	Phytochrome region
RvVAT039_RS19110	PF01799	[2Fe-2S] binding domain
RvVAT039_RS19110	PF00111	2Fe-2S iron-sulfur cluster binding domain
RvVAT039_RS19110	PF10518	TAT (twin-arginine translocation) pathway signal sequence
RvVAT039_RS19115	PF03450	CO dehydrogenase flavoprotein C-terminal domain
RvVAT039_RS19115	PF00941	FAD binding domain in molybdopterin dehydrogenase
RvVAT039_RS19120	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
RvVAT039_RS19120	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RvVAT039_RS19125	PF01627	Hpt domain
RvVAT039_RS19125	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS19125	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS19125	PF00072	Response regulator receiver domain
RvVAT039_RS19130	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS19130	PF03466	LysR substrate binding domain
RvVAT039_RS19140	PF00561	alpha/beta hydrolase fold
RvVAT039_RS19145	PF00106	short chain dehydrogenase
RvVAT039_RS19150	PF00248	Aldo/keto reductase family
RvVAT039_RS19155	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS19155	PF03466	LysR substrate binding domain
RvVAT039_RS19160	PF01272	Transcription elongation factor, GreA/GreB, C-term
RvVAT039_RS19160	PF03449	Transcription elongation factor, N-terminal
RvVAT039_RS19165	PF11975	Family 4 glycosyl hydrolase C-terminal domain
RvVAT039_RS19165	PF02056	Family 4 glycosyl hydrolase
RvVAT039_RS19170	PF00005	ABC transporter
RvVAT039_RS19170	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS19175	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS19175	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS19180	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS19185	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS19190	PF11975	Family 4 glycosyl hydrolase C-terminal domain
RvVAT039_RS19190	PF02056	Family 4 glycosyl hydrolase
RvVAT039_RS19195	PF12833	Helix-turn-helix domain
RvVAT039_RS19195	PF01497	Periplasmic binding protein
RvVAT039_RS19210	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS19210	PF00072	Response regulator receiver domain
RvVAT039_RS19220	PF00226	DnaJ domain
RvVAT039_RS19225	PF00107	Zinc-binding dehydrogenase
RvVAT039_RS19225	PF08240	Alcohol dehydrogenase GroES-like domain
RvVAT039_RS19230	PF13378	Enolase C-terminal domain-like
RvVAT039_RS19230	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
RvVAT039_RS19240	PF00248	Aldo/keto reductase family
RvVAT039_RS19250	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS19255	PF00005	ABC transporter
RvVAT039_RS19260	PF07729	FCD domain
RvVAT039_RS19260	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS19270	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS19275	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS19280	PF17912	MalK OB fold domain
RvVAT039_RS19280	PF00005	ABC transporter
RvVAT039_RS19295	PF00356	Bacterial regulatory proteins, lacI family
RvVAT039_RS19300	PF12399	Branched-chain amino acid ATP-binding cassette transporter
RvVAT039_RS19300	PF00005	ABC transporter
RvVAT039_RS19310	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS19320	PF00005	ABC transporter
RvVAT039_RS19325	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS19325	PF00672	HAMP domain
RvVAT039_RS19330	PF00296	Luciferase-like monooxygenase
RvVAT039_RS19335	PF00296	Luciferase-like monooxygenase
RvVAT039_RS19340	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
RvVAT039_RS19340	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
RvVAT039_RS19345	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
RvVAT039_RS19345	PF02770	Acyl-CoA dehydrogenase, middle domain
RvVAT039_RS19345	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
RvVAT039_RS19350	PF00248	Aldo/keto reductase family
RvVAT039_RS19355	PF01053	Cys/Met metabolism PLP-dependent enzyme
RvVAT039_RS19365	PF00005	ABC transporter
RvVAT039_RS19370	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS19375	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS19380	PF00296	Luciferase-like monooxygenase
RvVAT039_RS19385	PF00497	Bacterial extracellular solute-binding proteins, family 3
RvVAT039_RS19390	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS19395	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS19400	PF00005	ABC transporter
RvVAT039_RS19405	PF03972	MmgE/PrpD family
RvVAT039_RS19410	PF00296	Luciferase-like monooxygenase
RvVAT039_RS19415	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
RvVAT039_RS19420	PF00296	Luciferase-like monooxygenase
RvVAT039_RS19425	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS19425	PF00005	ABC transporter
RvVAT039_RS19430	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS19430	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS19435	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS19440	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS19455	PF00072	Response regulator receiver domain
RvVAT039_RS19455	PF00196	Bacterial regulatory proteins, luxR family
RvVAT039_RS19460	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS19460	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS19460	PF00672	HAMP domain
RvVAT039_RS19460	PF13426	PAS domain
RvVAT039_RS19465	PF00141	Peroxidase
RvVAT039_RS19475	PF00672	HAMP domain
RvVAT039_RS19475	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS19475	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS19480	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS19480	PF00072	Response regulator receiver domain
RvVAT039_RS19490	PF00873	AcrB/AcrD/AcrF family
RvVAT039_RS19500	PF14525	AraC-binding-like domain
RvVAT039_RS19505	PF00296	Luciferase-like monooxygenase
RvVAT039_RS19510	PF01613	Flavin reductase like domain
RvVAT039_RS19520	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
RvVAT039_RS19520	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
RvVAT039_RS19520	PF02770	Acyl-CoA dehydrogenase, middle domain
RvVAT039_RS19530	PF16859	Tetracyclin repressor-like, C-terminal domain
RvVAT039_RS19530	PF00440	Bacterial regulatory proteins, tetR family
RvVAT039_RS19550	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS19560	PF12833	Helix-turn-helix domain
RvVAT039_RS19565	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
RvVAT039_RS19565	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
RvVAT039_RS19570	PF00596	Class II Aldolase and Adducin N-terminal domain
RvVAT039_RS19575	PF00202	Aminotransferase class-III
RvVAT039_RS19590	PF00106	short chain dehydrogenase
RvVAT039_RS19615	PF08281	Sigma-70, region 4
RvVAT039_RS19615	PF04542	Sigma-70 region 2 
RvVAT039_RS19625	PF03831	PhnA domain
RvVAT039_RS19625	PF08274	PhnA Zinc-Ribbon 
RvVAT039_RS19630	PF01011	PQQ enzyme repeat
RvVAT039_RS19635	PF01047	MarR family
RvVAT039_RS19635	PF00480	ROK family
RvVAT039_RS19645	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS19650	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS19655	PF17912	MalK OB fold domain
RvVAT039_RS19655	PF00005	ABC transporter
RvVAT039_RS19660	PF03009	Glycerophosphoryl diester phosphodiesterase family
RvVAT039_RS19690	PF18417	L-lysine epsilon oxidase C-terminal domain
RvVAT039_RS19690	PF17990	L-Lysine epsilon oxidase N-terminal
RvVAT039_RS19700	PF03334	Na+/H+ antiporter subunit
RvVAT039_RS19705	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
RvVAT039_RS19710	PF01899	Na+/H+ ion antiporter subunit
RvVAT039_RS19715	PF00361	Proton-conducting membrane transporter
RvVAT039_RS19720	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
RvVAT039_RS19725	PF04039	Domain related to MnhB subunit of Na+/H+ antiporter
RvVAT039_RS19725	PF13244	Domain of unknown function (DUF4040)
RvVAT039_RS19725	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
RvVAT039_RS19725	PF00361	Proton-conducting membrane transporter
RvVAT039_RS19735	PF02608	ABC transporter substrate-binding protein PnrA-like
RvVAT039_RS19740	PF01425	Amidase
RvVAT039_RS19760	PF07969	Amidohydrolase family
RvVAT039_RS19765	PF01979	Amidohydrolase family
RvVAT039_RS19775	PF02633	Creatinine amidohydrolase
RvVAT039_RS19780	PF13454	FAD-NAD(P)-binding
RvVAT039_RS19785	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS19790	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS19795	PF00005	ABC transporter
RvVAT039_RS19795	PF08402	TOBE domain
RvVAT039_RS19800	PF13416	Bacterial extracellular solute-binding protein
RvVAT039_RS19805	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS19805	PF03466	LysR substrate binding domain
RvVAT039_RS19810	PF00196	Bacterial regulatory proteins, luxR family
RvVAT039_RS19810	PF17874	MalT-like TPR region
RvVAT039_RS19815	PF01425	Amidase
RvVAT039_RS19820	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS19825	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS19835	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS19835	PF00005	ABC transporter
RvVAT039_RS19840	PF00005	ABC transporter
RvVAT039_RS19840	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS19845	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS19845	PF00005	ABC transporter
RvVAT039_RS19855	PF01266	FAD dependent oxidoreductase
RvVAT039_RS19865	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS19870	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS19870	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS19875	PF00480	ROK family
RvVAT039_RS19880	PF00005	ABC transporter
RvVAT039_RS19890	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS19900	PF01047	MarR family
RvVAT039_RS19905	PF01613	Flavin reductase like domain
RvVAT039_RS19930	PF00043	Glutathione S-transferase, C-terminal domain
RvVAT039_RS19930	PF02798	Glutathione S-transferase, N-terminal domain
RvVAT039_RS19945	PF01557	Fumarylacetoacetate (FAA) hydrolase family
RvVAT039_RS19950	PF07995	Glucose / Sorbosone dehydrogenase
RvVAT039_RS19960	PF00534	Glycosyl transferases group 1
RvVAT039_RS19975	PF18011	C-terminal domain found in long catalases
RvVAT039_RS19975	PF00199	Catalase
RvVAT039_RS19975	PF06628	Catalase-related immune-responsive
RvVAT039_RS19980	PF01384	Phosphate transporter family
RvVAT039_RS19985	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS19990	PF00480	ROK family
RvVAT039_RS19995	PF01791	DeoC/LacD family aldolase
RvVAT039_RS20000	PF04198	Putative sugar-binding domain
RvVAT039_RS20005	PF13407	Periplasmic binding protein domain
RvVAT039_RS20010	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS20015	PF00005	ABC transporter
RvVAT039_RS20025	PF01546	Peptidase family M20/M25/M40
RvVAT039_RS20025	PF07687	Peptidase dimerisation domain
RvVAT039_RS20030	PF01053	Cys/Met metabolism PLP-dependent enzyme
RvVAT039_RS20035	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS20040	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS20055	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS20055	PF00005	ABC transporter
RvVAT039_RS20060	PF00005	ABC transporter
RvVAT039_RS20060	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS20065	PF01321	Creatinase/Prolidase N-terminal domain
RvVAT039_RS20065	PF00557	Metallopeptidase family M24
RvVAT039_RS20070	PF07729	FCD domain
RvVAT039_RS20070	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS20075	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS20080	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS20095	PF00005	ABC transporter
RvVAT039_RS20095	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS20100	PF03738	Glutathionylspermidine synthase preATP-grasp
RvVAT039_RS20110	PF03994	Domain of Unknown Function (DUF350) 
RvVAT039_RS20120	PF09938	Uncharacterized protein conserved in bacteria (DUF2170)
RvVAT039_RS20135	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS20135	PF00501	AMP-binding enzyme
RvVAT039_RS20145	PF07729	FCD domain
RvVAT039_RS20145	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS20150	PF00196	Bacterial regulatory proteins, luxR family
RvVAT039_RS20150	PF00072	Response regulator receiver domain
RvVAT039_RS20155	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS20165	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS20165	PF00005	ABC transporter
RvVAT039_RS20185	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS20190	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS20190	PF00072	Response regulator receiver domain
RvVAT039_RS20195	PF13426	PAS domain
RvVAT039_RS20195	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS20195	PF00989	PAS fold
RvVAT039_RS20195	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS20195	PF13188	PAS domain
RvVAT039_RS20200	PF00072	Response regulator receiver domain
RvVAT039_RS20200	PF00196	Bacterial regulatory proteins, luxR family
RvVAT039_RS20205	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS20205	PF07730	Histidine kinase
RvVAT039_RS20205	PF05384	Sensor protein DegS
RvVAT039_RS20215	PF07690	Major Facilitator Superfamily
RvVAT039_RS20220	PF12857	TOBE-like domain
RvVAT039_RS20220	PF00005	ABC transporter
RvVAT039_RS20225	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS20230	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS20240	PF00356	Bacterial regulatory proteins, lacI family
RvVAT039_RS20245	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
RvVAT039_RS20245	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
RvVAT039_RS20255	PF01547	Bacterial extracellular solute-binding protein
RvVAT039_RS20260	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS20265	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS20270	PF03459	TOBE domain
RvVAT039_RS20270	PF17912	MalK OB fold domain
RvVAT039_RS20270	PF00005	ABC transporter
RvVAT039_RS20280	PF00005	ABC transporter
RvVAT039_RS20285	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS20295	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS20295	PF03466	LysR substrate binding domain
RvVAT039_RS20300	PF07969	Amidohydrolase family
RvVAT039_RS20305	PF00703	Glycosyl hydrolases family 2
RvVAT039_RS20305	PF16353	Domain of unknown function(DUF4981)
RvVAT039_RS20305	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
RvVAT039_RS20305	PF02929	Beta galactosidase small chain
RvVAT039_RS20305	PF02837	Glycosyl hydrolases family 2, sugar binding domain
RvVAT039_RS20310	PF00480	ROK family
RvVAT039_RS20310	PF01325	Iron dependent repressor, N-terminal DNA binding domain
RvVAT039_RS20315	PF01226	Formate/nitrite transporter
RvVAT039_RS20320	PF01979	Amidohydrolase family
RvVAT039_RS20355	PF00111	2Fe-2S iron-sulfur cluster binding domain
RvVAT039_RS20355	PF00355	Rieske [2Fe-2S] domain
RvVAT039_RS20365	PF01979	Amidohydrolase family
RvVAT039_RS20365	PF13382	Adenine deaminase C-terminal domain
RvVAT039_RS20370	PF03466	LysR substrate binding domain
RvVAT039_RS20370	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS20385	PF05199	GMC oxidoreductase
RvVAT039_RS20385	PF00732	GMC oxidoreductase
RvVAT039_RS20390	PF01979	Amidohydrolase family
RvVAT039_RS20400	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RvVAT039_RS20400	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
RvVAT039_RS20405	PF00111	2Fe-2S iron-sulfur cluster binding domain
RvVAT039_RS20405	PF01799	[2Fe-2S] binding domain
RvVAT039_RS20410	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS20415	PF01144	Coenzyme A transferase
RvVAT039_RS20420	PF01144	Coenzyme A transferase
RvVAT039_RS20425	PF07729	FCD domain
RvVAT039_RS20425	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS20430	PF01070	FMN-dependent dehydrogenase
RvVAT039_RS20440	PF01557	Fumarylacetoacetate (FAA) hydrolase family
RvVAT039_RS20445	PF01494	FAD binding domain
RvVAT039_RS20450	PF13458	Periplasmic binding protein
RvVAT039_RS20465	PF00005	ABC transporter
RvVAT039_RS20465	PF12399	Branched-chain amino acid ATP-binding cassette transporter
RvVAT039_RS20470	PF00005	ABC transporter
RvVAT039_RS20475	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
RvVAT039_RS20485	PF01220	Dehydroquinase class II
RvVAT039_RS20490	PF08501	Shikimate dehydrogenase substrate binding domain
RvVAT039_RS20490	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
RvVAT039_RS20495	PF00005	ABC transporter
RvVAT039_RS20500	PF00497	Bacterial extracellular solute-binding proteins, family 3
RvVAT039_RS20505	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS20510	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS20515	PF11941	Domain of unknown function (DUF3459)
RvVAT039_RS20515	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
RvVAT039_RS20515	PF00128	Alpha amylase, catalytic domain
RvVAT039_RS20520	PF00128	Alpha amylase, catalytic domain
RvVAT039_RS20525	PF02566	OsmC-like protein
RvVAT039_RS20540	PF00005	ABC transporter
RvVAT039_RS20545	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS20550	PF09084	NMT1/THI5 like
RvVAT039_RS20555	PF09084	NMT1/THI5 like
RvVAT039_RS20560	PF00296	Luciferase-like monooxygenase
RvVAT039_RS20565	PF02082	Transcriptional regulator
RvVAT039_RS20570	PF01613	Flavin reductase like domain
RvVAT039_RS20580	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS20580	PF03466	LysR substrate binding domain
RvVAT039_RS20590	PF13533	Biotin-lipoyl like
RvVAT039_RS20595	PF00873	AcrB/AcrD/AcrF family
RvVAT039_RS20600	PF00005	ABC transporter
RvVAT039_RS20610	PF00989	PAS fold
RvVAT039_RS20610	PF13426	PAS domain
RvVAT039_RS20610	PF08447	PAS fold
RvVAT039_RS20610	PF13493	Domain of unknown function (DUF4118)
RvVAT039_RS20610	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS20610	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS20615	PF00196	Bacterial regulatory proteins, luxR family
RvVAT039_RS20615	PF00072	Response regulator receiver domain
RvVAT039_RS20620	PF01261	Xylose isomerase-like TIM barrel
RvVAT039_RS20625	PF00005	ABC transporter
RvVAT039_RS20625	PF17912	MalK OB fold domain
RvVAT039_RS20630	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS20635	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS20640	PF13416	Bacterial extracellular solute-binding protein
RvVAT039_RS20645	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS20655	PF08402	TOBE domain
RvVAT039_RS20655	PF00005	ABC transporter
RvVAT039_RS20670	PF00480	ROK family
RvVAT039_RS20675	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS20680	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS20685	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS20685	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS20690	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS20690	PF00005	ABC transporter
RvVAT039_RS20695	PF00005	ABC transporter
RvVAT039_RS20695	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS20700	PF00072	Response regulator receiver domain
RvVAT039_RS20700	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS20705	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS20705	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS20715	PF00202	Aminotransferase class-III
RvVAT039_RS20725	PF00892	EamA-like transporter family
RvVAT039_RS20745	PF00892	EamA-like transporter family
RvVAT039_RS20760	PF03552	Cellulose synthase
RvVAT039_RS20760	PF07238	PilZ domain
RvVAT039_RS20760	PF00535	Glycosyl transferase family 2
RvVAT039_RS20775	PF08447	PAS fold
RvVAT039_RS20775	PF07536	HWE histidine kinase
RvVAT039_RS20775	PF13426	PAS domain
RvVAT039_RS20780	PF07536	HWE histidine kinase
RvVAT039_RS20780	PF13426	PAS domain
RvVAT039_RS20785	PF00072	Response regulator receiver domain
RvVAT039_RS20795	PF03193	RsgA GTPase
RvVAT039_RS20800	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS20800	PF13426	PAS domain
RvVAT039_RS20800	PF00072	Response regulator receiver domain
RvVAT039_RS20805	PF16363	GDP-mannose 4,6 dehydratase
RvVAT039_RS20815	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
RvVAT039_RS20815	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
RvVAT039_RS20820	PF00005	ABC transporter
RvVAT039_RS20825	PF00497	Bacterial extracellular solute-binding proteins, family 3
RvVAT039_RS20830	PF00356	Bacterial regulatory proteins, lacI family
RvVAT039_RS20835	PF00672	HAMP domain
RvVAT039_RS20835	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS20840	PF01584	CheW-like domain
RvVAT039_RS20845	PF13533	Biotin-lipoyl like
RvVAT039_RS20850	PF00873	AcrB/AcrD/AcrF family
RvVAT039_RS20855	PF00873	AcrB/AcrD/AcrF family
RvVAT039_RS20860	PF07729	FCD domain
RvVAT039_RS20860	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS20865	PF01571	Aminomethyltransferase folate-binding domain
RvVAT039_RS20870	PF00403	Heavy-metal-associated domain
RvVAT039_RS20875	PF13411	MerR HTH family regulatory protein
RvVAT039_RS20880	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
RvVAT039_RS20880	PF00128	Alpha amylase, catalytic domain
RvVAT039_RS20880	PF02806	Alpha amylase, C-terminal all-beta domain
RvVAT039_RS20885	PF16657	Maltogenic Amylase, C-terminal domain
RvVAT039_RS20885	PF00128	Alpha amylase, catalytic domain
RvVAT039_RS20890	PF11896	Domain of unknown function (DUF3416)
RvVAT039_RS20890	PF00128	Alpha amylase, catalytic domain
RvVAT039_RS20895	PF02446	4-alpha-glucanotransferase
RvVAT039_RS20900	PF00313	'Cold-shock' DNA-binding domain
RvVAT039_RS20905	PF01207	Dihydrouridine synthase (Dus)
RvVAT039_RS20915	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
RvVAT039_RS20915	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
RvVAT039_RS20925	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS20925	PF07729	FCD domain
RvVAT039_RS20930	PF00701	Dihydrodipicolinate synthetase family
RvVAT039_RS20940	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
RvVAT039_RS20940	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
RvVAT039_RS20950	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS20955	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS20965	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
RvVAT039_RS20965	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
RvVAT039_RS20970	PF00005	ABC transporter
RvVAT039_RS20970	PF17912	MalK OB fold domain
RvVAT039_RS20975	PF17284	Spermidine synthase tetramerisation domain
RvVAT039_RS20990	PF13426	PAS domain
RvVAT039_RS20990	PF08447	PAS fold
RvVAT039_RS20990	PF07536	HWE histidine kinase
RvVAT039_RS20995	PF06745	KaiC
RvVAT039_RS21000	PF13581	Histidine kinase-like ATPase domain
RvVAT039_RS21000	PF13426	PAS domain
RvVAT039_RS21000	PF07536	HWE histidine kinase
RvVAT039_RS21015	PF05974	Domain of unknown function (DUF892)
RvVAT039_RS21020	PF04542	Sigma-70 region 2 
RvVAT039_RS21020	PF08281	Sigma-70, region 4
RvVAT039_RS21045	PF08448	PAS fold
RvVAT039_RS21045	PF08447	PAS fold
RvVAT039_RS21045	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS21045	PF00563	EAL domain
RvVAT039_RS21055	PF00211	Adenylate and Guanylate cyclase catalytic domain
RvVAT039_RS21065	PF00664	ABC transporter transmembrane region
RvVAT039_RS21065	PF00005	ABC transporter
RvVAT039_RS21070	PF13302	Acetyltransferase (GNAT) domain
RvVAT039_RS21070	PF00027	Cyclic nucleotide-binding domain
RvVAT039_RS21075	PF00459	Inositol monophosphatase family
RvVAT039_RS21085	PF00005	ABC transporter
RvVAT039_RS21085	PF08402	TOBE domain
RvVAT039_RS21090	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS21095	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS21105	PF00483	Nucleotidyl transferase
RvVAT039_RS21105	PF00132	Bacterial transferase hexapeptide (six repeats)
RvVAT039_RS21110	PF03786	D-mannonate dehydratase (UxuA)
RvVAT039_RS21135	PF16197	Ketoacyl-synthetase C-terminal extension
RvVAT039_RS21135	PF00109	Beta-ketoacyl synthase, N-terminal domain
RvVAT039_RS21135	PF02801	Beta-ketoacyl synthase, C-terminal domain
RvVAT039_RS21135	PF08659	KR domain
RvVAT039_RS21135	PF00550	Phosphopantetheine attachment site
RvVAT039_RS21135	PF00698	Acyl transferase domain
RvVAT039_RS21135	PF08240	Alcohol dehydrogenase GroES-like domain
RvVAT039_RS21135	PF14765	Polyketide synthase dehydratase
RvVAT039_RS21140	PF00109	Beta-ketoacyl synthase, N-terminal domain
RvVAT039_RS21140	PF16197	Ketoacyl-synthetase C-terminal extension
RvVAT039_RS21140	PF00698	Acyl transferase domain
RvVAT039_RS21140	PF14765	Polyketide synthase dehydratase
RvVAT039_RS21140	PF02801	Beta-ketoacyl synthase, C-terminal domain
RvVAT039_RS21140	PF00550	Phosphopantetheine attachment site
RvVAT039_RS21140	PF08659	KR domain
RvVAT039_RS21145	PF00698	Acyl transferase domain
RvVAT039_RS21155	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
RvVAT039_RS21155	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
RvVAT039_RS21155	PF02770	Acyl-CoA dehydrogenase, middle domain
RvVAT039_RS21165	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS21165	PF00005	ABC transporter
RvVAT039_RS21170	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS21170	PF00005	ABC transporter
RvVAT039_RS21175	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS21180	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS21180	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS21185	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS21190	PF00561	alpha/beta hydrolase fold
RvVAT039_RS21205	PF03466	LysR substrate binding domain
RvVAT039_RS21205	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS21210	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS21215	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS21220	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS21220	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS21225	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS21225	PF00005	ABC transporter
RvVAT039_RS21230	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS21230	PF00005	ABC transporter
RvVAT039_RS21235	PF01425	Amidase
RvVAT039_RS21240	PF01425	Amidase
RvVAT039_RS21250	PF00857	Isochorismatase family
RvVAT039_RS21260	PF09663	Amidohydrolase ring-opening protein (Amido_AtzD_TrzD)
RvVAT039_RS21265	PF00857	Isochorismatase family
RvVAT039_RS21270	PF00795	Carbon-nitrogen hydrolase
RvVAT039_RS21285	PF02608	ABC transporter substrate-binding protein PnrA-like
RvVAT039_RS21290	PF07729	FCD domain
RvVAT039_RS21290	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS21295	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS21295	PF00005	ABC transporter
RvVAT039_RS21300	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS21300	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS21305	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS21310	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS21320	PF00202	Aminotransferase class-III
RvVAT039_RS21335	PF01266	FAD dependent oxidoreductase
RvVAT039_RS21345	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS21355	PF01546	Peptidase family M20/M25/M40
RvVAT039_RS21355	PF07687	Peptidase dimerisation domain
RvVAT039_RS21360	PF00440	Bacterial regulatory proteins, tetR family
RvVAT039_RS21360	PF08361	MAATS-type transcriptional repressor, C-terminal region
RvVAT039_RS21365	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
RvVAT039_RS21370	PF00873	AcrB/AcrD/AcrF family
RvVAT039_RS21375	PF01039	Carboxyl transferase domain
RvVAT039_RS21390	PF18140	Propionyl-coenzyme A carboxylase BT domain
RvVAT039_RS21390	PF00364	Biotin-requiring enzyme
RvVAT039_RS21390	PF00289	Biotin carboxylase, N-terminal domain
RvVAT039_RS21390	PF02785	Biotin carboxylase C-terminal domain
RvVAT039_RS21390	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
RvVAT039_RS21405	PF02310	B12 binding domain
RvVAT039_RS21405	PF01642	Methylmalonyl-CoA mutase
RvVAT039_RS21410	PF01047	MarR family
RvVAT039_RS21420	PF01546	Peptidase family M20/M25/M40
RvVAT039_RS21425	PF08220	DeoR-like helix-turn-helix domain
RvVAT039_RS21425	PF00455	DeoR C terminal sensor domain
RvVAT039_RS21430	PF00005	ABC transporter
RvVAT039_RS21430	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS21435	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS21435	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS21440	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS21480	PF13823	Alcohol dehydrogenase GroES-associated
RvVAT039_RS21480	PF08240	Alcohol dehydrogenase GroES-like domain
RvVAT039_RS21480	PF00107	Zinc-binding dehydrogenase
RvVAT039_RS21500	PF00873	AcrB/AcrD/AcrF family
RvVAT039_RS21515	PF00005	ABC transporter
RvVAT039_RS21520	PF01032	FecCD transport family
RvVAT039_RS21525	PF01032	FecCD transport family
RvVAT039_RS21530	PF01497	Periplasmic binding protein
RvVAT039_RS21535	PF07715	TonB-dependent Receptor Plug Domain
RvVAT039_RS21550	PF00501	AMP-binding enzyme
RvVAT039_RS21550	PF00550	Phosphopantetheine attachment site
RvVAT039_RS21550	PF00501	AMP-binding enzyme
RvVAT039_RS21550	PF00668	Condensation domain
RvVAT039_RS21550	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS21550	PF00550	Phosphopantetheine attachment site
RvVAT039_RS21550	PF07993	Male sterility protein
RvVAT039_RS21550	PF00668	Condensation domain
RvVAT039_RS21550	PF07993	Male sterility protein
RvVAT039_RS21550	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS21555	PF00501	AMP-binding enzyme
RvVAT039_RS21555	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS21555	PF00668	Condensation domain
RvVAT039_RS21555	PF00550	Phosphopantetheine attachment site
RvVAT039_RS21560	PF16197	Ketoacyl-synthetase C-terminal extension
RvVAT039_RS21560	PF00698	Acyl transferase domain
RvVAT039_RS21560	PF00668	Condensation domain
RvVAT039_RS21560	PF00550	Phosphopantetheine attachment site
RvVAT039_RS21560	PF00109	Beta-ketoacyl synthase, N-terminal domain
RvVAT039_RS21560	PF02801	Beta-ketoacyl synthase, C-terminal domain
RvVAT039_RS21580	PF02801	Beta-ketoacyl synthase, C-terminal domain
RvVAT039_RS21580	PF00501	AMP-binding enzyme
RvVAT039_RS21580	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS21580	PF00668	Condensation domain
RvVAT039_RS21580	PF16197	Ketoacyl-synthetase C-terminal extension
RvVAT039_RS21580	PF00109	Beta-ketoacyl synthase, N-terminal domain
RvVAT039_RS21580	PF00550	Phosphopantetheine attachment site
RvVAT039_RS21580	PF00202	Aminotransferase class-III
RvVAT039_RS21585	PF13649	Methyltransferase domain
RvVAT039_RS21590	PF00501	AMP-binding enzyme
RvVAT039_RS21590	PF00668	Condensation domain
RvVAT039_RS21590	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS21590	PF07993	Male sterility protein
RvVAT039_RS21590	PF00550	Phosphopantetheine attachment site
RvVAT039_RS21595	PF00501	AMP-binding enzyme
RvVAT039_RS21600	PF00550	Phosphopantetheine attachment site
RvVAT039_RS21600	PF00109	Beta-ketoacyl synthase, N-terminal domain
RvVAT039_RS21600	PF16197	Ketoacyl-synthetase C-terminal extension
RvVAT039_RS21600	PF00668	Condensation domain
RvVAT039_RS21600	PF00698	Acyl transferase domain
RvVAT039_RS21600	PF02801	Beta-ketoacyl synthase, C-terminal domain
RvVAT039_RS21605	PF00296	Luciferase-like monooxygenase
RvVAT039_RS21610	PF00550	Phosphopantetheine attachment site
RvVAT039_RS21610	PF00668	Condensation domain
RvVAT039_RS21610	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS21610	PF00501	AMP-binding enzyme
RvVAT039_RS21615	PF01554	MatE
RvVAT039_RS21620	PF02082	Transcriptional regulator
RvVAT039_RS21655	PF00005	ABC transporter
RvVAT039_RS21655	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS21660	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS21660	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS21665	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS21670	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS21675	PF00296	Luciferase-like monooxygenase
RvVAT039_RS21690	PF00005	ABC transporter
RvVAT039_RS21700	PF01546	Peptidase family M20/M25/M40
RvVAT039_RS21700	PF07687	Peptidase dimerisation domain
RvVAT039_RS21705	PF00296	Luciferase-like monooxygenase
RvVAT039_RS21710	PF00296	Luciferase-like monooxygenase
RvVAT039_RS21735	PF00501	AMP-binding enzyme
RvVAT039_RS21735	PF00550	Phosphopantetheine attachment site
RvVAT039_RS21735	PF00668	Condensation domain
RvVAT039_RS21735	PF00975	Thioesterase domain
RvVAT039_RS21735	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS21740	PF06339	Ectoine synthase
RvVAT039_RS21765	PF00834	Ribulose-phosphate 3 epimerase family
RvVAT039_RS21775	PF00665	Integrase core domain
RvVAT039_RS21780	PF01695	IstB-like ATP binding protein
RvVAT039_RS21785	PF00155	Aminotransferase class I and II
RvVAT039_RS21795	PF00892	EamA-like transporter family
RvVAT039_RS21810	PF09228	Prokaryotic Transcriptional repressor TraM
RvVAT039_RS21825	PF02661	Fic/DOC family
RvVAT039_RS21825	PF13784	Fic/DOC family N-terminal
RvVAT039_RS21840	PF01695	IstB-like ATP binding protein
RvVAT039_RS21885	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
RvVAT039_RS21885	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
RvVAT039_RS21910	PF07993	Male sterility protein
RvVAT039_RS21910	PF00668	Condensation domain
RvVAT039_RS21910	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS21910	PF00501	AMP-binding enzyme
RvVAT039_RS21910	PF00550	Phosphopantetheine attachment site
RvVAT039_RS21920	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS21920	PF00501	AMP-binding enzyme
RvVAT039_RS21930	PF00501	AMP-binding enzyme
RvVAT039_RS21930	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS21940	PF02770	Acyl-CoA dehydrogenase, middle domain
RvVAT039_RS21940	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
RvVAT039_RS21940	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
RvVAT039_RS21950	PF12833	Helix-turn-helix domain
RvVAT039_RS21950	PF02311	AraC-like ligand binding domain
RvVAT039_RS21955	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
RvVAT039_RS21960	PF00005	ABC transporter
RvVAT039_RS21995	PF13592	Winged helix-turn helix
RvVAT039_RS22000	PF13358	DDE superfamily endonuclease
RvVAT039_RS22020	PF07690	Major Facilitator Superfamily
RvVAT039_RS22035	PF00356	Bacterial regulatory proteins, lacI family
RvVAT039_RS22045	PF00005	ABC transporter
RvVAT039_RS22050	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS22055	PF00106	short chain dehydrogenase
RvVAT039_RS22060	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
RvVAT039_RS22060	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
RvVAT039_RS22065	PF12728	Helix-turn-helix domain
RvVAT039_RS22065	PF02661	Fic/DOC family
RvVAT039_RS22075	PF03328	HpcH/HpaI aldolase/citrate lyase family
RvVAT039_RS22080	PF01557	Fumarylacetoacetate (FAA) hydrolase family
RvVAT039_RS22085	PF01557	Fumarylacetoacetate (FAA) hydrolase family
RvVAT039_RS22090	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS22095	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
RvVAT039_RS22100	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS22110	PF01613	Flavin reductase like domain
RvVAT039_RS22115	PF03241	4-hydroxyphenylacetate 3-hydroxylase C terminal
RvVAT039_RS22115	PF11794	4-hydroxyphenylacetate 3-hydroxylase N terminal
RvVAT039_RS22125	PF01047	MarR family
RvVAT039_RS22130	PF03466	LysR substrate binding domain
RvVAT039_RS22130	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS22140	PF13460	NAD(P)H-binding 
RvVAT039_RS22145	PF00202	Aminotransferase class-III
RvVAT039_RS22150	PF13419	Haloacid dehalogenase-like hydrolase
RvVAT039_RS22160	PF09339	IclR helix-turn-helix domain
RvVAT039_RS22160	PF01614	Bacterial transcriptional regulator
RvVAT039_RS22165	PF13520	Amino acid permease
RvVAT039_RS22170	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS22175	PF00005	ABC transporter
RvVAT039_RS22180	PF00005	ABC transporter
RvVAT039_RS22185	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS22185	PF11862	Domain of unknown function (DUF3382)
RvVAT039_RS22200	PF05199	GMC oxidoreductase
RvVAT039_RS22200	PF00732	GMC oxidoreductase
RvVAT039_RS22205	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS22210	PF12833	Helix-turn-helix domain
RvVAT039_RS22215	PF00294	pfkB family carbohydrate kinase
RvVAT039_RS22220	PF01380	SIS domain
RvVAT039_RS22220	PF01418	Helix-turn-helix domain, rpiR family
RvVAT039_RS22225	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS22230	PF00005	ABC transporter
RvVAT039_RS22235	PF13407	Periplasmic binding protein domain
RvVAT039_RS22240	PF01261	Xylose isomerase-like TIM barrel
RvVAT039_RS22245	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
RvVAT039_RS22245	PF00294	pfkB family carbohydrate kinase
RvVAT039_RS22255	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS22260	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS22270	PF00005	ABC transporter
RvVAT039_RS22270	PF17912	MalK OB fold domain
RvVAT039_RS22270	PF03459	TOBE domain
RvVAT039_RS22285	PF07729	FCD domain
RvVAT039_RS22285	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS22300	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS22305	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS22310	PF07470	Glycosyl Hydrolase Family 88
RvVAT039_RS22315	PF03459	TOBE domain
RvVAT039_RS22315	PF17912	MalK OB fold domain
RvVAT039_RS22315	PF00005	ABC transporter
RvVAT039_RS22325	PF01547	Bacterial extracellular solute-binding protein
RvVAT039_RS22335	PF00132	Bacterial transferase hexapeptide (six repeats)
RvVAT039_RS22335	PF12804	MobA-like NTP transferase domain
RvVAT039_RS22340	PF08402	TOBE domain
RvVAT039_RS22340	PF00005	ABC transporter
RvVAT039_RS22350	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS22355	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS22365	PF01325	Iron dependent repressor, N-terminal DNA binding domain
RvVAT039_RS22365	PF00480	ROK family
RvVAT039_RS22375	PF01112	Asparaginase
RvVAT039_RS22385	PF02203	Tar ligand binding domain homologue
RvVAT039_RS22385	PF00672	HAMP domain
RvVAT039_RS22385	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RvVAT039_RS22390	PF07690	Major Facilitator Superfamily
RvVAT039_RS22405	PF01695	IstB-like ATP binding protein
RvVAT039_RS22450	PF00005	ABC transporter
RvVAT039_RS22455	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS22460	PF00497	Bacterial extracellular solute-binding proteins, family 3
RvVAT039_RS22475	PF00685	Sulfotransferase domain
RvVAT039_RS22485	PF13649	Methyltransferase domain
RvVAT039_RS22490	PF00067	Cytochrome P450
RvVAT039_RS22505	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
RvVAT039_RS22505	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
RvVAT039_RS22510	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
RvVAT039_RS22510	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
RvVAT039_RS22515	PF00723	Glycosyl hydrolases family 15
RvVAT039_RS22515	PF09137	Glucodextranase, domain N
RvVAT039_RS22520	PF00155	Aminotransferase class I and II
RvVAT039_RS22520	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS22530	PF00795	Carbon-nitrogen hydrolase
RvVAT039_RS22535	PF04055	Radical SAM superfamily
RvVAT039_RS22535	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
RvVAT039_RS22545	PF00586	AIR synthase related protein, N-terminal domain
RvVAT039_RS22545	PF02769	AIR synthase related protein, C-terminal domain
RvVAT039_RS22550	PF00534	Glycosyl transferases group 1
RvVAT039_RS22550	PF13439	Glycosyltransferase Family 4
RvVAT039_RS22575	PF00384	Molybdopterin oxidoreductase
RvVAT039_RS22600	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS22605	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS22610	PF00005	ABC transporter
RvVAT039_RS22610	PF08402	TOBE domain
RvVAT039_RS22615	PF17938	Tetracyclin repressor-like, C-terminal domain
RvVAT039_RS22615	PF00440	Bacterial regulatory proteins, tetR family
RvVAT039_RS22620	PF00561	alpha/beta hydrolase fold
RvVAT039_RS22625	PF00285	Citrate synthase, C-terminal domain
RvVAT039_RS22630	PF00285	Citrate synthase, C-terminal domain
RvVAT039_RS22635	PF01070	FMN-dependent dehydrogenase
RvVAT039_RS22640	PF01970	Tripartite tricarboxylate transporter TctA family
RvVAT039_RS22650	PF03401	Tripartite tricarboxylate transporter family receptor
RvVAT039_RS22660	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
RvVAT039_RS22660	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
RvVAT039_RS22665	PF03737	Aldolase/RraA
RvVAT039_RS22670	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
RvVAT039_RS22670	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
RvVAT039_RS22675	PF01261	Xylose isomerase-like TIM barrel
RvVAT039_RS22680	PF00480	ROK family
RvVAT039_RS22685	PF00005	ABC transporter
RvVAT039_RS22685	PF08402	TOBE domain
RvVAT039_RS22690	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS22710	PF04444	Catechol dioxygenase N terminus
RvVAT039_RS22710	PF00775	Dioxygenase
RvVAT039_RS22725	PF00465	Iron-containing alcohol dehydrogenase 
RvVAT039_RS22730	PF01494	FAD binding domain
RvVAT039_RS22740	PF12399	Branched-chain amino acid ATP-binding cassette transporter
RvVAT039_RS22740	PF00005	ABC transporter
RvVAT039_RS22745	PF00005	ABC transporter
RvVAT039_RS22750	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS22755	PF11862	Domain of unknown function (DUF3382)
RvVAT039_RS22755	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS22770	PF01557	Fumarylacetoacetate (FAA) hydrolase family
RvVAT039_RS22790	PF01494	FAD binding domain
RvVAT039_RS22795	PF01557	Fumarylacetoacetate (FAA) hydrolase family
RvVAT039_RS22820	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
RvVAT039_RS22820	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
RvVAT039_RS22825	PF07690	Major Facilitator Superfamily
RvVAT039_RS22835	PF01144	Coenzyme A transferase
RvVAT039_RS22850	PF17645	Arylmalonate decarboxylase
RvVAT039_RS22855	PF09339	IclR helix-turn-helix domain
RvVAT039_RS22855	PF01614	Bacterial transcriptional regulator
RvVAT039_RS22865	PF01613	Flavin reductase like domain
RvVAT039_RS22870	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
RvVAT039_RS22870	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
RvVAT039_RS22880	PF01614	Bacterial transcriptional regulator
RvVAT039_RS22880	PF09339	IclR helix-turn-helix domain
RvVAT039_RS22885	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
RvVAT039_RS22890	PF01022	Bacterial regulatory protein, arsR family
RvVAT039_RS22895	PF00268	Ribonucleotide reductase, small chain
RvVAT039_RS22900	PF00317	Ribonucleotide reductase, all-alpha domain
RvVAT039_RS22900	PF02867	Ribonucleotide reductase, barrel domain
RvVAT039_RS22900	PF08343	Ribonucleotide reductase N-terminal
RvVAT039_RS22905	PF07972	NrdI Flavodoxin like 
RvVAT039_RS22910	PF00462	Glutaredoxin
RvVAT039_RS22915	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS22915	PF03466	LysR substrate binding domain
RvVAT039_RS22920	PF08402	TOBE domain
RvVAT039_RS22920	PF00005	ABC transporter
RvVAT039_RS22930	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS22950	PF03707	Bacterial signalling protein N terminal repeat
RvVAT039_RS22950	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS22950	PF00563	EAL domain
RvVAT039_RS22970	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS22975	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS22980	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS22980	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS22985	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS22985	PF00005	ABC transporter
RvVAT039_RS22990	PF00005	ABC transporter
RvVAT039_RS22990	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS22995	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS22995	PF03466	LysR substrate binding domain
RvVAT039_RS23000	PF13378	Enolase C-terminal domain-like
RvVAT039_RS23000	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
RvVAT039_RS23005	PF02426	Muconolactone delta-isomerase
RvVAT039_RS23010	PF04444	Catechol dioxygenase N terminus
RvVAT039_RS23010	PF00775	Dioxygenase
RvVAT039_RS23015	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
RvVAT039_RS23015	PF00355	Rieske [2Fe-2S] domain
RvVAT039_RS23020	PF00866	Ring hydroxylating beta subunit
RvVAT039_RS23025	PF00111	2Fe-2S iron-sulfur cluster binding domain
RvVAT039_RS23025	PF00175	Oxidoreductase NAD-binding domain 
RvVAT039_RS23025	PF00970	Oxidoreductase FAD-binding domain
RvVAT039_RS23030	PF00106	short chain dehydrogenase
RvVAT039_RS23035	PF07690	Major Facilitator Superfamily
RvVAT039_RS23040	PF12146	Serine aminopeptidase, S33
RvVAT039_RS23045	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS23050	PF00107	Zinc-binding dehydrogenase
RvVAT039_RS23050	PF08240	Alcohol dehydrogenase GroES-like domain
RvVAT039_RS23055	PF00005	ABC transporter
RvVAT039_RS23060	PF01032	FecCD transport family
RvVAT039_RS23065	PF01032	FecCD transport family
RvVAT039_RS23075	PF01554	MatE
RvVAT039_RS23080	PF00291	Pyridoxal-phosphate dependent enzyme
RvVAT039_RS23085	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
RvVAT039_RS23105	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS23110	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS23110	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS23115	PF00005	ABC transporter
RvVAT039_RS23120	PF05544	Proline racemase
RvVAT039_RS23125	PF07687	Peptidase dimerisation domain
RvVAT039_RS23125	PF01546	Peptidase family M20/M25/M40
RvVAT039_RS23140	PF00005	ABC transporter
RvVAT039_RS23145	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS23150	PF01968	Hydantoinase/oxoprolinase
RvVAT039_RS23150	PF05378	Hydantoinase/oxoprolinase N-terminal region
RvVAT039_RS23165	PF04542	Sigma-70 region 2 
RvVAT039_RS23165	PF08281	Sigma-70, region 4
RvVAT039_RS23175	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS23175	PF03466	LysR substrate binding domain
RvVAT039_RS23185	PF08659	KR domain
RvVAT039_RS23185	PF08240	Alcohol dehydrogenase GroES-like domain
RvVAT039_RS23185	PF14765	Polyketide synthase dehydratase
RvVAT039_RS23185	PF00698	Acyl transferase domain
RvVAT039_RS23185	PF00550	Phosphopantetheine attachment site
RvVAT039_RS23195	PF03328	HpcH/HpaI aldolase/citrate lyase family
RvVAT039_RS23200	PF01557	Fumarylacetoacetate (FAA) hydrolase family
RvVAT039_RS23205	PF04444	Catechol dioxygenase N terminus
RvVAT039_RS23205	PF00775	Dioxygenase
RvVAT039_RS23220	PF01548	Transposase
RvVAT039_RS23220	PF02371	Transposase IS116/IS110/IS902 family
RvVAT039_RS23265	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS23270	PF13417	Glutathione S-transferase, N-terminal domain
RvVAT039_RS23275	PF01557	Fumarylacetoacetate (FAA) hydrolase family
RvVAT039_RS23280	PF00501	AMP-binding enzyme
RvVAT039_RS23280	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS23285	PF01494	FAD binding domain
RvVAT039_RS23295	PF09339	IclR helix-turn-helix domain
RvVAT039_RS23295	PF01614	Bacterial transcriptional regulator
RvVAT039_RS23305	PF07883	Cupin domain
RvVAT039_RS23320	PF01850	PIN domain
RvVAT039_RS23350	PF00202	Aminotransferase class-III
RvVAT039_RS23355	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
RvVAT039_RS23360	PF01053	Cys/Met metabolism PLP-dependent enzyme
RvVAT039_RS23380	PF01810	LysE type translocator
RvVAT039_RS23385	PF16861	Carbamoyltransferase C-terminus
RvVAT039_RS23385	PF02543	Carbamoyltransferase N-terminus
RvVAT039_RS23405	PF00698	Acyl transferase domain
RvVAT039_RS23415	PF00501	AMP-binding enzyme
RvVAT039_RS23415	PF00501	AMP-binding enzyme
RvVAT039_RS23415	PF00550	Phosphopantetheine attachment site
RvVAT039_RS23415	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS23415	PF00668	Condensation domain
RvVAT039_RS23415	PF00550	Phosphopantetheine attachment site
RvVAT039_RS23415	PF00668	Condensation domain
RvVAT039_RS23415	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS23420	PF00975	Thioesterase domain
RvVAT039_RS23420	PF00550	Phosphopantetheine attachment site
RvVAT039_RS23420	PF08659	KR domain
RvVAT039_RS23420	PF02801	Beta-ketoacyl synthase, C-terminal domain
RvVAT039_RS23420	PF00109	Beta-ketoacyl synthase, N-terminal domain
RvVAT039_RS23420	PF16197	Ketoacyl-synthetase C-terminal extension
RvVAT039_RS23420	PF08990	Erythronolide synthase docking
RvVAT039_RS23420	PF00698	Acyl transferase domain
RvVAT039_RS23430	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS23435	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS23440	PF00005	ABC transporter
RvVAT039_RS23440	PF08402	TOBE domain
RvVAT039_RS23445	PF01590	GAF domain
RvVAT039_RS23445	PF00158	Sigma-54 interaction domain
RvVAT039_RS23445	PF02954	Bacterial regulatory protein, Fis family
RvVAT039_RS23450	PF00107	Zinc-binding dehydrogenase
RvVAT039_RS23450	PF08240	Alcohol dehydrogenase GroES-like domain
RvVAT039_RS23460	PF03737	Aldolase/RraA
RvVAT039_RS23465	PF03466	LysR substrate binding domain
RvVAT039_RS23465	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS23470	PF00364	Biotin-requiring enzyme
RvVAT039_RS23475	PF00364	Biotin-requiring enzyme
RvVAT039_RS23485	PF02626	Carboxyltransferase domain, subdomain A and B 
RvVAT039_RS23490	PF03746	LamB/YcsF family
RvVAT039_RS23495	PF00155	Aminotransferase class I and II
RvVAT039_RS23500	PF03466	LysR substrate binding domain
RvVAT039_RS23500	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS23505	PF00106	short chain dehydrogenase
RvVAT039_RS23510	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS23515	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS23520	PF00005	ABC transporter
RvVAT039_RS23525	PF00497	Bacterial extracellular solute-binding proteins, family 3
RvVAT039_RS23535	PF00356	Bacterial regulatory proteins, lacI family
RvVAT039_RS23545	PF00005	ABC transporter
RvVAT039_RS23550	PF02653	Branched-chain amino acid transport system / permease component
RvVAT039_RS23555	PF02126	Phosphotriesterase family
RvVAT039_RS23565	PF00294	pfkB family carbohydrate kinase
RvVAT039_RS23575	PF07687	Peptidase dimerisation domain
RvVAT039_RS23575	PF01546	Peptidase family M20/M25/M40
RvVAT039_RS23580	PF00873	AcrB/AcrD/AcrF family
RvVAT039_RS23585	PF13533	Biotin-lipoyl like
RvVAT039_RS23590	PF02321	Outer membrane efflux protein
RvVAT039_RS23595	PF00072	Response regulator receiver domain
RvVAT039_RS23595	PF00486	Transcriptional regulatory protein, C terminal
RvVAT039_RS23600	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RvVAT039_RS23600	PF00512	His Kinase A (phospho-acceptor) domain
RvVAT039_RS23600	PF16527	Two-component sensor protein CpxA, periplasmic domain
RvVAT039_RS23600	PF00672	HAMP domain
RvVAT039_RS23610	PF03167	Uracil DNA glycosylase superfamily
RvVAT039_RS23630	PF00764	Arginosuccinate synthase
RvVAT039_RS23635	PF01037	Lrp/AsnC ligand binding domain
RvVAT039_RS23655	PF07690	Major Facilitator Superfamily
RvVAT039_RS23660	PF01261	Xylose isomerase-like TIM barrel
RvVAT039_RS23675	PF00480	ROK family
RvVAT039_RS23680	PF01761	3-dehydroquinate synthase
RvVAT039_RS23685	PF03466	LysR substrate binding domain
RvVAT039_RS23685	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS23690	PF01695	IstB-like ATP binding protein
RvVAT039_RS23710	PF00698	Acyl transferase domain
RvVAT039_RS23715	PF00698	Acyl transferase domain
RvVAT039_RS23725	PF17837	4'-phosphopantetheinyl transferase N-terminal domain
RvVAT039_RS23725	PF01648	4'-phosphopantetheinyl transferase superfamily
RvVAT039_RS23730	PF16197	Ketoacyl-synthetase C-terminal extension
RvVAT039_RS23730	PF00550	Phosphopantetheine attachment site
RvVAT039_RS23730	PF00109	Beta-ketoacyl synthase, N-terminal domain
RvVAT039_RS23730	PF08659	KR domain
RvVAT039_RS23730	PF00698	Acyl transferase domain
RvVAT039_RS23730	PF14765	Polyketide synthase dehydratase
RvVAT039_RS23730	PF02801	Beta-ketoacyl synthase, C-terminal domain
RvVAT039_RS23735	PF00550	Phosphopantetheine attachment site
RvVAT039_RS23735	PF08659	KR domain
RvVAT039_RS23735	PF14765	Polyketide synthase dehydratase
RvVAT039_RS23735	PF02801	Beta-ketoacyl synthase, C-terminal domain
RvVAT039_RS23735	PF00109	Beta-ketoacyl synthase, N-terminal domain
RvVAT039_RS23735	PF16197	Ketoacyl-synthetase C-terminal extension
RvVAT039_RS23740	PF02801	Beta-ketoacyl synthase, C-terminal domain
RvVAT039_RS23740	PF16197	Ketoacyl-synthetase C-terminal extension
RvVAT039_RS23740	PF00109	Beta-ketoacyl synthase, N-terminal domain
RvVAT039_RS23740	PF14765	Polyketide synthase dehydratase
RvVAT039_RS23740	PF00550	Phosphopantetheine attachment site
RvVAT039_RS23740	PF08659	KR domain
RvVAT039_RS23745	PF08659	KR domain
RvVAT039_RS23745	PF16197	Ketoacyl-synthetase C-terminal extension
RvVAT039_RS23745	PF00550	Phosphopantetheine attachment site
RvVAT039_RS23745	PF00668	Condensation domain
RvVAT039_RS23745	PF14765	Polyketide synthase dehydratase
RvVAT039_RS23745	PF02801	Beta-ketoacyl synthase, C-terminal domain
RvVAT039_RS23745	PF00109	Beta-ketoacyl synthase, N-terminal domain
RvVAT039_RS23745	PF00501	AMP-binding enzyme
RvVAT039_RS23745	PF13193	AMP-binding enzyme C-terminal domain
RvVAT039_RS23750	PF14765	Polyketide synthase dehydratase
RvVAT039_RS23750	PF00550	Phosphopantetheine attachment site
RvVAT039_RS23750	PF08659	KR domain
RvVAT039_RS23750	PF00109	Beta-ketoacyl synthase, N-terminal domain
RvVAT039_RS23750	PF02801	Beta-ketoacyl synthase, C-terminal domain
RvVAT039_RS23750	PF16197	Ketoacyl-synthetase C-terminal extension
RvVAT039_RS23765	PF11972	HTH DNA binding domain
RvVAT039_RS23765	PF07756	Protein of unknown function (DUF1612)
RvVAT039_RS23795	PF13737	Transposase DDE domain
RvVAT039_RS23805	PF00221	Aromatic amino acid lyase
RvVAT039_RS23810	PF01546	Peptidase family M20/M25/M40
RvVAT039_RS23810	PF07687	Peptidase dimerisation domain
RvVAT039_RS23815	PF01979	Amidohydrolase family
RvVAT039_RS23825	PF00005	ABC transporter
RvVAT039_RS23825	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS23830	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS23830	PF00005	ABC transporter
RvVAT039_RS23840	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS23850	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS23855	PF02441	Flavoprotein
RvVAT039_RS23860	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
RvVAT039_RS23865	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS23865	PF03466	LysR substrate binding domain
RvVAT039_RS23870	PF00155	Aminotransferase class I and II
RvVAT039_RS23875	PF00005	ABC transporter
RvVAT039_RS23875	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS23880	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RvVAT039_RS23880	PF00005	ABC transporter
RvVAT039_RS23885	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS23885	PF12911	N-terminal TM domain of oligopeptide transport permease C
RvVAT039_RS23890	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS23895	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RvVAT039_RS23910	PF00535	Glycosyl transferase family 2
RvVAT039_RS23915	PF04230	Polysaccharide pyruvyl transferase
RvVAT039_RS23950	PF00296	Luciferase-like monooxygenase
RvVAT039_RS23965	PF00589	Phage integrase family
RvVAT039_RS23970	PF00990	Diguanylate cyclase, GGDEF domain
RvVAT039_RS23970	PF17158	Membrane-associated sensor, integral membrane domain
RvVAT039_RS23980	PF03428	Replication protein C N-terminal domain
RvVAT039_RS23980	PF11800	Replication protein C C-terminal region
RvVAT039_RS23985	PF07506	RepB plasmid partitioning protein
RvVAT039_RS23985	PF02195	ParB-like nuclease domain
RvVAT039_RS23990	PF13614	AAA domain
RvVAT039_RS23995	PF00873	AcrB/AcrD/AcrF family
RvVAT039_RS24000	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
RvVAT039_RS24005	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS24015	PF01048	Phosphorylase superfamily
RvVAT039_RS24045	PF02608	ABC transporter substrate-binding protein PnrA-like
RvVAT039_RS24050	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS24050	PF07702	UTRA domain
RvVAT039_RS24060	PF03428	Replication protein C N-terminal domain
RvVAT039_RS24060	PF11800	Replication protein C C-terminal region
RvVAT039_RS24065	PF02195	ParB-like nuclease domain
RvVAT039_RS24065	PF07506	RepB plasmid partitioning protein
RvVAT039_RS24070	PF00376	MerR family regulatory protein
RvVAT039_RS24070	PF13614	AAA domain
RvVAT039_RS24075	PF00765	Autoinducer synthase
RvVAT039_RS24080	PF00437	Type II/IV secretion system protein
RvVAT039_RS24085	PF04956	TrbC/VIRB2 family
RvVAT039_RS24090	PF05101	Type IV secretory pathway, VirB3-like protein
RvVAT039_RS24095	PF03135	CagE, TrbE, VirB family, component of type IV transporter system
RvVAT039_RS24105	PF10907	Protein of unknown function (DUF2749)
RvVAT039_RS24110	PF04610	TrbL/VirB6 plasmid conjugal transfer protein
RvVAT039_RS24115	PF04335	VirB8 protein
RvVAT039_RS24120	PF03524	Conjugal transfer protein
RvVAT039_RS24130	PF03743	Bacterial conjugation TrbI-like protein 
RvVAT039_RS24135	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS24135	PF03466	LysR substrate binding domain
RvVAT039_RS24140	PF00005	ABC transporter
RvVAT039_RS24145	PF00497	Bacterial extracellular solute-binding proteins, family 3
RvVAT039_RS24150	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS24155	PF00528	Binding-protein-dependent transport system inner membrane component
RvVAT039_RS24160	PF03466	LysR substrate binding domain
RvVAT039_RS24160	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS24170	PF01968	Hydantoinase/oxoprolinase
RvVAT039_RS24170	PF05378	Hydantoinase/oxoprolinase N-terminal region
RvVAT039_RS24175	PF01266	FAD dependent oxidoreductase
RvVAT039_RS24185	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RvVAT039_RS24185	PF04324	BFD-like [2Fe-2S] binding domain
RvVAT039_RS24190	PF00491	Arginase family
RvVAT039_RS24200	PF02423	Ornithine cyclodeaminase/mu-crystallin family
RvVAT039_RS24210	PF03472	Autoinducer binding domain
RvVAT039_RS24210	PF00196	Bacterial regulatory proteins, luxR family
RvVAT039_RS24215	PF09228	Prokaryotic Transcriptional repressor TraM
RvVAT039_RS24225	PF09386	Antitoxin ParD
RvVAT039_RS24230	PF05016	ParE toxin of type II toxin-antitoxin system, parDE
RvVAT039_RS24235	PF06871	TraH_2
RvVAT039_RS24240	PF00795	Carbon-nitrogen hydrolase
RvVAT039_RS24245	PF10502	Signal peptidase, peptidase S26 
RvVAT039_RS24250	PF17841	BID domain of Bartonella effector protein (Bep)
RvVAT039_RS24250	PF01443	Viral (Superfamily 1) RNA helicase
RvVAT039_RS24250	PF03389	MobA/MobL family
RvVAT039_RS24255	PF07820	TraC-like protein
RvVAT039_RS24260	PF06412	Conjugal transfer protein TraD
RvVAT039_RS24265	PF02534	Type IV secretory system Conjugative DNA transfer
RvVAT039_RS24275	PF05406	WGR domain
RvVAT039_RS24280	PF00216	Bacterial DNA-binding protein
RvVAT039_RS24285	PF05284	Protein of unknown function (DUF736)
RvVAT039_RS24300	PF00106	short chain dehydrogenase
RvVAT039_RS24320	PF00171	Aldehyde dehydrogenase family
RvVAT039_RS24325	PF03358	NADPH-dependent FMN reductase
RvVAT039_RS24330	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS24330	PF03466	LysR substrate binding domain
RvVAT039_RS24340	PF01494	FAD binding domain
RvVAT039_RS24360	PF02195	ParB-like nuclease domain
RvVAT039_RS24360	PF17762	HTH domain found in ParB protein
RvVAT039_RS24365	PF13298	DNA polymerase Ligase (LigD)
RvVAT039_RS24365	PF01068	ATP dependent DNA ligase domain
RvVAT039_RS24365	PF04679	ATP dependent DNA ligase C terminal region        
RvVAT039_RS24395	PF05717	IS66 Orf2 like protein
RvVAT039_RS24400	PF13005	zinc-finger binding domain of transposase IS66 
RvVAT039_RS24400	PF03050	Transposase IS66 family 
RvVAT039_RS24400	PF13817	IS66 C-terminal element
RvVAT039_RS24400	PF13007	Transposase C of IS166 homeodomain
RvVAT039_RS24410	PF03466	LysR substrate binding domain
RvVAT039_RS24410	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS24415	PF02371	Transposase IS116/IS110/IS902 family
RvVAT039_RS24415	PF01548	Transposase
RvVAT039_RS24445	PF00873	AcrB/AcrD/AcrF family
RvVAT039_RS24470	PF16701	Adenylate cyclase regulatory domain
RvVAT039_RS24470	PF00211	Adenylate and Guanylate cyclase catalytic domain
RvVAT039_RS24475	PF00403	Heavy-metal-associated domain
RvVAT039_RS24480	PF09278	MerR, DNA binding
RvVAT039_RS24480	PF00376	MerR family regulatory protein
RvVAT039_RS24495	PF00394	Multicopper oxidase
RvVAT039_RS24495	PF07732	Multicopper oxidase
RvVAT039_RS24495	PF07731	Multicopper oxidase
RvVAT039_RS24500	PF04945	YHS domain
RvVAT039_RS24545	PF00211	Adenylate and Guanylate cyclase catalytic domain
RvVAT039_RS24545	PF00072	Response regulator receiver domain
RvVAT039_RS24550	PF01970	Tripartite tricarboxylate transporter TctA family
RvVAT039_RS24555	PF07331	Tripartite tricarboxylate transporter TctB family
RvVAT039_RS24560	PF00180	Isocitrate/isopropylmalate dehydrogenase
RvVAT039_RS24565	PF03401	Tripartite tricarboxylate transporter family receptor
RvVAT039_RS24570	PF07729	FCD domain
RvVAT039_RS24570	PF00392	Bacterial regulatory proteins, gntR family
RvVAT039_RS24575	PF02887	Pyruvate kinase, alpha/beta domain
RvVAT039_RS24575	PF00224	Pyruvate kinase, barrel domain
RvVAT039_RS24580	PF13660	Domain of unknown function (DUF4147)
RvVAT039_RS24580	PF05161	MOFRL family
RvVAT039_RS24585	PF00180	Isocitrate/isopropylmalate dehydrogenase
RvVAT039_RS24590	PF07690	Major Facilitator Superfamily
RvVAT039_RS24595	PF03466	LysR substrate binding domain
RvVAT039_RS24595	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS24600	PF07804	HipA-like C-terminal domain
RvVAT039_RS24600	PF13657	HipA N-terminal domain
RvVAT039_RS24605	PF01381	Helix-turn-helix
RvVAT039_RS24620	PF00005	ABC transporter
RvVAT039_RS24625	PF00005	ABC transporter
RvVAT039_RS24630	PF06007	Phosphonate metabolism protein PhnJ
RvVAT039_RS24635	PF05861	Bacterial phosphonate metabolism protein (PhnI)
RvVAT039_RS24640	PF05845	Bacterial phosphonate metabolism protein (PhnH)
RvVAT039_RS24670	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RvVAT039_RS24670	PF03466	LysR substrate binding domain
