>YP_009507856.1 polyprotein [Alajuela virus] MIHLIAIILATASAEPTRCFSGGSKIFEKTSNFAVSEVCLKDDVGLIKIQTDYHKNDTGIFATMSSWRKWTVTEWHSCKP RKVNMGSISVIEIDSNFTIKTASYSCNKDCMITVDKEHATVLLQSTGLNHYELTGTTIKTGWFKSTATVPLDQTCEHIKI ICGLKSLQFHACFKQHMACVRFLHRSILLGYIASSICHNIELILMCCLIIFIFTILVILTKTYICYILLPIFVPIAYSYG WIYNKSCKKCQLCGLAYHPFTKCGQNCVCGALFDTTERMRIHRISGLCPGYKSMRTARVLCKNRGSALLLSIALGFLTVS FLTPIADAKTLESHEDDTKLFLHMVQNTTIDQPILYKQCYYRVHFCQTVIDHNKYRMLSRFVCSNQDLFMTLLLLPASYA AIQLIDFIVKTAIRLIKQRRWIKVSQDADENSYVEMNPISMNSTRTVFKIRKFSFNKPFFALSAAILVNSFLSVNGAMLP TPKTVYDINELPDDFRELHAQAGLLHIITYLNAMWTTMAAILVLSIMILLSKKQRKLLGLCAMYCEECDMYHSKRGIKYN GDFTNKCGKCTCGTVEDATGLTVHKLRLECLIKYKLKWFKTLLVFILCVYITKDMALLTAAEEITDCLKKTELTGNCTGP FFKPSGCNGIASGKLGPEEIITLLKSKKAISSLDEPLIKDLPLEVGIAIKKINSVQDIHKKMVLEFAFLQRNCDYYSRFT GDSGYSQVSWRSYTQISMFDLCKNSQAAGTCKCLKIGNSCTKNDSLEDTSVEFYKEGNKIQHDHELFLSIFKLAFPGTAY AYVLNQTEQQNFEAVKNYLAAIQTKYPENYMLKSLMKVGSIIYKNLSSANLSSEHKEDLPKYIPVYHGNTRGRTGVNRHD KKLNQSNVREDGICINPKDIVCISPRSKMHAPIYTWCEKGTTVYIPNLDGLKLYRSALNSGVFCFGDKHCLIKPKMFDSK TAEDIFNNECLASPHTEEVDQYSLGQLRCNIISYGRCFVDSKGEYWPVALCAGGFHFYASQGSVPEDAVDPSERCLGEEC HLRRYPINPVSLSNCTYYDPKVRMNRVKESVHTDFESYKNSIIRRLADDLTVHKFLKTSNLPYFNPNFKYITMSGVDTTE GIENAYIEFEIPASTGVAAGYNILADNQIHIFDVIIYIKSAKTVAEYQWIYSTGPTITINTEHAEHCTGRCPSVIEAKKG WATFSKERTSNWGCEEFGCLAIDDGCVFGSCQDVIKPEANVYKKIGQEKTTAEICVSMNHDAYCTEIEATVPIISSSIEA QFKTVDAPVMPNLVLVRDHKLYRGQINDLGSFGKYCGNVQVRNLTVLGQADVKFDYLCHAAQRKDIIVRKCLENNYASCK LLDLEEHFILDESESNVKLSDLGRLTGALKVKLYLGDFKYKSFSREIDVDATIECVGCYNCLKGIDCKLNLHTTVEASCK IDTPCPASLSRIVIKPTIDEYAINMKCQKPLEGDNVLIKVCNAAIKTQIAISKKTEQIELSTGEQSTYIHEEDLRCSTWI CKIKDEGFSFLLKPITDWLGTFTRPVLISFAVIFILLVLLYILIPVFAKIRDKLREIEKEYQKEARASRKHK >YP_009507857.1 structural nucleocapsid protein [Alajuela virus] MSDSLYVFDDDSTASSSTYDPTQEYNVFISTHGDQLTPANIKCFFLHARTAKARLAKDPAERRTLTFGSWKVEVVNNHYR RATPVTVQDHDNTLHRISGYLALYCLQTSSQNKQNFERIKSVVINPISESMGINWQHGAMIYLSTLPGAEMFLTEFQLFP LAFAVVRVKKNLASPETVKKVLRQRYDGKLPGEWMNSELEKVKTAITKVEALHKTFVGVTARMIEFFTALGINLDMRR >YP_009507858.1 non-structural protein [Alajuela virus] MIRRQALALMIQRRNTMSLLVLTGTSLLQQTLNVSSCMHVQPRLVWQRTRRNAERLLLDLGRLRLLITITEEPLRLQCRT MIIPCTAFPDILPCTACRPAPRISRTLSESSQSSSTRSLSPWGSTGSMEQ >YP_009507859.1 RNA-dependent RNA polymerase [Alajuela virus] MNETLEEELKALEGRLKGVRETSDGKELFTAILVRRHDYFGYELCKAMDIPYRNDVKLVDILHECFHDIDTGDVTIPNIT PDNFIFDGEVLTILDYKVSVSLESTEHTIEKYTKELDKIRNFLPSRVELCIIRCHPRTTKLTFTNDRIKRMYANIQLELN FEPFENLITELKDRFRDSDEFLAMIAHGDVTLTVKWCQTGCPELRQHPIFNEFYESLEDEYKEMFDRSMQFSAYSAEKWN QNLIKIRDQTSDEYKEFVRRNSSELFQTDGNYPEPSKEEILAGWDEMSERIQQTRQMSKDINDQKPSIHFIWSEHNPKLP THSTHKLMMVSKLLQNLSSNSDFADDFRQIGKLMDIGDNVLVYENHCEALKLEARKNLKPIQNRKLNPRRIGSAQVLWEQ QFLMSAEDMGKARKVHLLKEYFGIGRHRDFSHKTNADINMEKPKILDFNDPDIIRMSQIMMEKTSGLLSQQTTLKPNHAI VDEYMDNIKEANENTFKTIKQILSTKYWSCISDISMLMKNILSVAQYNRSHTFRLAMCANNSLYALVLPSADIKSRKSTV VFCIIALHTEEESVFNPGCLHATYKTFTSDKTGWLSISKAIRLDKERCQRIVTSPGLFLSTVTLLKQDNNSIDLNDVMNF ALYTSLNVTKSMLSLTEPSRYMIMNSLAVSSHVKEYISEKFNPYTKTLFSVYMCNKIKIGCLNAFNQRQKIKLRDIFLTD FDITQKGISDNRDLTSIWFPGFVTLKEYLNQIFLVFYLNPKGLHEKHHVMIDLLKTVIEIELDQRNNIPVPWSDTPKKQT VNLPIFLNSVAINLMHDTAYCTHLRSRIENRNNLRRSFSTISTFTSSKSCIKIGDFSSLKTEINRKIEKARKAEEKRSRI ANPNFIHDEEYKNVVEHCNYDMMRKAIPEYTDHISTKVFDRLYELQKNGTLTDEPVVGQILEMMVNHKQFFFSFFNKGQK TAKDREIFVGEYEAKMCMYLVERIFKERSKVNPDEMISEPGDGKLKVLERKAEQEIRFLIEHIKQRNSPIMEEIENLKES VLFDKSKLEDLVNSKYHGLKLEINADMSKWSAQDVFFKYFWVVAMDPILYPEEKERIIYFFCNYMNKRLIIPDEVIYTIL DQQIPYKNDMVMQVTNGLHSNTFNVKRNWLQGNFNYMSSYVHSCAMSVYKDILRTAAKKIEADIMVNSMVHSDDNQTAIC LINNRLDTRVFTKFAIQLFEKICLTFGCQANMKKTYVTNHIKEFVSLFNLYGEPFSVYGRFTLTAVGDCAYIGPYEDLAS RISSTQTAIKHGCPASLAWLSISISHWITYLTYNMLPGQINDPSVSLGIENRREIPIELGGYLEANLSMIALAGLESGNI QFLINLLTKMVNPILFRENVVSQCSDIKNWDLTRLTFSEIFRLKVLRFLALDAEMDCSDTMGETGEMRSRSLLTPRKFTT AGSLRKLVSFGDFQACQSEPEGINTVVEYMIEHPELLVTKGETAEDYKNIVLYRYNSRRFKESLSIQNPAQLFLEQILFS HKPIIDYTGIQEKYLNLSDSTVTEDQPEILGRVTFPEAFRKIREDLSTLKITINDIQTVYDFVILNDPMVIAIANAHLLS NQGAMQDRLGSSCSTMPEFRNLRLITHSPALVLRSYSTGRYDVPGADPDEMRRDRTHLQEFIDNTKLLLKMEQRIEQNEK AKGSRDILFEIKEITKFYQVCYEYIKSTEHKVKVYILPVKCYTTTDFCAAIQGSLIKDKQWAVIQHIHPVSAGGHKGIVQ KHTTNEIKLAEDCMRLIAFFIDTFIDENHRIYMFKRMVDEFTYSGRKVSDLLEIIATSKNRVDFLPILYRSGLLEQRDLD SYDALKSSGRPTWNKWQTTRALDMGKIDLSIDTHRSSIRIIGEDRNLHYAELYLPSINYDSITRSGYKLLNAKHGLKFQS MSEVSVRKDEWYITYQRKSRDNYVYKIFYGKKLLNPLPDHDLRYNRTTNPIVPVCHVIPMVRPDIDRIMLEDMDSLNIEN FKIGVLNTGIGEQARLRRCMLHKMKNFEGPDIKSKVINLTKLMKDNTLMSLNYDNVCNVHLSQFCKLLDCNGNEGTLDDA MYSFSDEPMEQTQIDEIECTPIFKVQYSVPGSRYLNYRNAIKELLSREIRQFREAFTLVGDDFDSPENIGYLENIICIID QLQTNEWSTIMKKCIHICFLASNQDHVFHTFSLNKYFFEGNTPASGRLNWRNLKSFIISLPEIKSAPWRNIFSSFKLKCI ALLDREIAKVEVNQDFSKILAREDLRQSFFNFF