AFA_RS00055	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AFA_RS00085	PWY-5103	L-isoleucine biosynthesis III
AFA_RS00085	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AFA_RS00225	PWY-5381	pyridine nucleotide cycling (plants)
AFA_RS00225	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AFA_RS00225	PWY-6596	adenosine nucleotides degradation I
AFA_RS00225	PWY-6606	guanosine nucleotides degradation II
AFA_RS00225	PWY-6607	guanosine nucleotides degradation I
AFA_RS00225	PWY-6608	guanosine nucleotides degradation III
AFA_RS00225	PWY-7185	UTP and CTP dephosphorylation I
AFA_RS00225	PWY-7821	AFA_RS00225
AFA_RS00290	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AFA_RS00290	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AFA_RS00290	PWY-7717	AFA_RS00290
AFA_RS00290	PWY-7733	AFA_RS00290
AFA_RS00290	PWY-7734	AFA_RS00290
AFA_RS00290	PWY-7765	AFA_RS00290
AFA_RS00405	PWY-5155	&beta;-alanine biosynthesis III
AFA_RS00540	PWY-7723	AFA_RS00540
AFA_RS00565	PWY-5381	pyridine nucleotide cycling (plants)
AFA_RS00580	PWY-6728	methylaspartate cycle
AFA_RS00580	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AFA_RS00580	PWY-7118	chitin degradation to ethanol
AFA_RS00580	PWY-7294	xylose degradation IV
AFA_RS00580	PWY-7295	L-arabinose degradation IV
AFA_RS00580	PWY-7854	AFA_RS00580
AFA_RS00590	PWY-6617	adenosine nucleotides degradation III
AFA_RS00615	PWY-5101	L-isoleucine biosynthesis II
AFA_RS00615	PWY-5103	L-isoleucine biosynthesis III
AFA_RS00615	PWY-5104	L-isoleucine biosynthesis IV
AFA_RS00615	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AFA_RS00615	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AFA_RS00615	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AFA_RS00615	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AFA_RS00675	PWY-6679	jadomycin biosynthesis
AFA_RS00675	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AFA_RS00705	PWY-6936	seleno-amino acid biosynthesis
AFA_RS00750	PWY-6871	3-methylbutanol biosynthesis
AFA_RS00780	PWY-6871	3-methylbutanol biosynthesis
AFA_RS01070	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AFA_RS01130	PWY-5074	mevalonate degradation
AFA_RS01155	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AFA_RS01195	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AFA_RS01205	PWY-3801	sucrose degradation II (sucrose synthase)
AFA_RS01205	PWY-6527	stachyose degradation
AFA_RS01205	PWY-7238	sucrose biosynthesis II
AFA_RS01205	PWY-7343	UDP-glucose biosynthesis
AFA_RS01205	PWY-7817	AFA_RS01205
AFA_RS01210	PWY-3961	phosphopantothenate biosynthesis II
AFA_RS01225	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AFA_RS01225	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AFA_RS01240	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AFA_RS01240	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AFA_RS01250	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AFA_RS01250	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AFA_RS01355	PWY-5958	acridone alkaloid biosynthesis
AFA_RS01355	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AFA_RS01355	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AFA_RS01360	PWY-5958	acridone alkaloid biosynthesis
AFA_RS01360	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AFA_RS01360	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AFA_RS01365	PWY-181	photorespiration
AFA_RS01375	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AFA_RS01375	PWY-5723	Rubisco shunt
AFA_RS01415	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AFA_RS01420	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AFA_RS01425	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AFA_RS01425	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AFA_RS01425	PWY-6406	salicylate biosynthesis I
AFA_RS01455	PWY-6012	acyl carrier protein metabolism I
AFA_RS01455	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AFA_RS01510	PWY-1361	benzoyl-CoA degradation I (aerobic)
AFA_RS01510	PWY-5109	2-methylbutanoate biosynthesis
AFA_RS01510	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AFA_RS01510	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AFA_RS01510	PWY-5177	glutaryl-CoA degradation
AFA_RS01510	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AFA_RS01510	PWY-6435	4-hydroxybenzoate biosynthesis V
AFA_RS01510	PWY-6583	pyruvate fermentation to butanol I
AFA_RS01510	PWY-6863	pyruvate fermentation to hexanol
AFA_RS01510	PWY-6883	pyruvate fermentation to butanol II
AFA_RS01510	PWY-6944	androstenedione degradation
AFA_RS01510	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AFA_RS01510	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AFA_RS01510	PWY-7007	methyl ketone biosynthesis
AFA_RS01510	PWY-7046	4-coumarate degradation (anaerobic)
AFA_RS01510	PWY-7094	fatty acid salvage
AFA_RS01510	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AFA_RS01510	PWY-735	jasmonic acid biosynthesis
AFA_RS01510	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AFA_RS01510	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AFA_RS01510	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AFA_RS01510	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AFA_RS01510	PWY-7726	AFA_RS01510
AFA_RS01510	PWY-7778	AFA_RS01510
AFA_RS01510	PWY-7779	AFA_RS01510
AFA_RS01510	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AFA_RS01515	PWY-5667	CDP-diacylglycerol biosynthesis I
AFA_RS01515	PWY-5981	CDP-diacylglycerol biosynthesis III
AFA_RS01585	PWY-4381	fatty acid biosynthesis initiation I
AFA_RS01620	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AFA_RS01620	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AFA_RS01705	PWY-6967	methylamine degradation I
AFA_RS01720	PWY-6967	methylamine degradation I
AFA_RS01740	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AFA_RS01740	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AFA_RS01740	PWY-7766	AFA_RS01740
AFA_RS01780	PWY-723	alkylnitronates degradation
AFA_RS01790	PWY-1361	benzoyl-CoA degradation I (aerobic)
AFA_RS01790	PWY-5109	2-methylbutanoate biosynthesis
AFA_RS01790	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AFA_RS01790	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AFA_RS01790	PWY-5177	glutaryl-CoA degradation
AFA_RS01790	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AFA_RS01790	PWY-6435	4-hydroxybenzoate biosynthesis V
AFA_RS01790	PWY-6583	pyruvate fermentation to butanol I
AFA_RS01790	PWY-6863	pyruvate fermentation to hexanol
AFA_RS01790	PWY-6883	pyruvate fermentation to butanol II
AFA_RS01790	PWY-6944	androstenedione degradation
AFA_RS01790	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AFA_RS01790	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AFA_RS01790	PWY-7007	methyl ketone biosynthesis
AFA_RS01790	PWY-7046	4-coumarate degradation (anaerobic)
AFA_RS01790	PWY-7094	fatty acid salvage
AFA_RS01790	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AFA_RS01790	PWY-735	jasmonic acid biosynthesis
AFA_RS01790	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AFA_RS01790	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AFA_RS01790	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AFA_RS01790	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AFA_RS01790	PWY-7726	AFA_RS01790
AFA_RS01790	PWY-7778	AFA_RS01790
AFA_RS01790	PWY-7779	AFA_RS01790
AFA_RS01790	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AFA_RS01815	PWY-6840	homoglutathione biosynthesis
AFA_RS01815	PWY-7255	ergothioneine biosynthesis I (bacteria)
AFA_RS01830	PWY-5344	L-homocysteine biosynthesis
AFA_RS01870	PWY-5279	sulfite oxidation II
AFA_RS01935	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AFA_RS01935	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AFA_RS01935	PWY-6268	adenosylcobalamin salvage from cobalamin
AFA_RS01935	PWY-6269	adenosylcobalamin salvage from cobinamide II
AFA_RS02005	PWY-2941	L-lysine biosynthesis II
AFA_RS02005	PWY-5097	L-lysine biosynthesis VI
AFA_RS02020	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AFA_RS02020	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AFA_RS02025	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AFA_RS02035	PWY-2201	folate transformations I
AFA_RS02035	PWY-3841	folate transformations II
AFA_RS02075	PWY-1622	formaldehyde assimilation I (serine pathway)
AFA_RS02075	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AFA_RS02075	PWY-5913	TCA cycle VI (obligate autotrophs)
AFA_RS02075	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AFA_RS02075	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AFA_RS02075	PWY-6549	L-glutamine biosynthesis III
AFA_RS02075	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AFA_RS02075	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AFA_RS02075	PWY-7124	ethylene biosynthesis V (engineered)
AFA_RS02080	PWY-5101	L-isoleucine biosynthesis II
AFA_RS02080	PWY-5103	L-isoleucine biosynthesis III
AFA_RS02080	PWY-5104	L-isoleucine biosynthesis IV
AFA_RS02080	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AFA_RS02105	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AFA_RS02210	PWY-6454	vancomycin resistance I
AFA_RS02210	PWY-6901	superpathway of glucose and xylose degradation
AFA_RS02245	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AFA_RS02245	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AFA_RS02330	PWY-1042	glycolysis IV (plant cytosol)
AFA_RS02330	PWY-1622	formaldehyde assimilation I (serine pathway)
AFA_RS02330	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AFA_RS02330	PWY-5484	glycolysis II (from fructose 6-phosphate)
AFA_RS02330	PWY-5723	Rubisco shunt
AFA_RS02330	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AFA_RS02330	PWY-6886	1-butanol autotrophic biosynthesis
AFA_RS02330	PWY-6901	superpathway of glucose and xylose degradation
AFA_RS02330	PWY-7003	glycerol degradation to butanol
AFA_RS02330	PWY-7124	ethylene biosynthesis V (engineered)
AFA_RS02330	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AFA_RS02355	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AFA_RS02535	PWY-5692	allantoin degradation to glyoxylate II
AFA_RS02535	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
AFA_RS02575	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AFA_RS02595	PWY-3841	folate transformations II
AFA_RS02595	PWY-6614	tetrahydrofolate biosynthesis
AFA_RS02600	PWY-3841	folate transformations II
AFA_RS02600	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AFA_RS02600	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AFA_RS02600	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AFA_RS02600	PWY-7199	pyrimidine deoxyribonucleosides salvage
AFA_RS02600	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AFA_RS02610	PWY-3781	aerobic respiration I (cytochrome c)
AFA_RS02610	PWY-4521	arsenite oxidation I (respiratory)
AFA_RS02610	PWY-6692	Fe(II) oxidation
AFA_RS02610	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AFA_RS02640	PWY-1042	glycolysis IV (plant cytosol)
AFA_RS02640	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AFA_RS02640	PWY-5484	glycolysis II (from fructose 6-phosphate)
AFA_RS02640	PWY-5723	Rubisco shunt
AFA_RS02640	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AFA_RS02640	PWY-6886	1-butanol autotrophic biosynthesis
AFA_RS02640	PWY-6901	superpathway of glucose and xylose degradation
AFA_RS02640	PWY-7003	glycerol degradation to butanol
AFA_RS02640	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AFA_RS02640	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AFA_RS02695	PWY-5694	allantoin degradation to glyoxylate I
AFA_RS02695	PWY-5705	allantoin degradation to glyoxylate III
AFA_RS02700	PWY-5691	urate degradation to allantoin I
AFA_RS02700	PWY-7394	urate degradation to allantoin II
AFA_RS02700	PWY-7849	AFA_RS02700
AFA_RS02710	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AFA_RS02710	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AFA_RS02710	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AFA_RS02745	PWY-6749	CMP-legionaminate biosynthesis I
AFA_RS02800	PWY-7560	methylerythritol phosphate pathway II
AFA_RS02820	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AFA_RS02870	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AFA_RS02870	PWY-5743	3-hydroxypropanoate cycle
AFA_RS02870	PWY-5744	glyoxylate assimilation
AFA_RS02870	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AFA_RS02870	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AFA_RS02870	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AFA_RS02870	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AFA_RS02880	PWY-5694	allantoin degradation to glyoxylate I
AFA_RS02880	PWY-5705	allantoin degradation to glyoxylate III
AFA_RS03040	PWY-1881	formate oxidation to CO<sub>2</sub>
AFA_RS03040	PWY-5497	purine nucleobases degradation II (anaerobic)
AFA_RS03040	PWY-6696	oxalate degradation III
AFA_RS03065	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AFA_RS03065	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AFA_RS03070	PWY-6823	molybdenum cofactor biosynthesis
AFA_RS03080	PWY-6823	molybdenum cofactor biosynthesis
AFA_RS03135	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AFA_RS03230	PWY-7799	AFA_RS03230
AFA_RS03230	PWY-7800	AFA_RS03230
AFA_RS03250	PWY-6700	queuosine biosynthesis
AFA_RS03255	PWY-6700	queuosine biosynthesis
AFA_RS03260	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AFA_RS03260	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AFA_RS03265	PWY-7183	pyrimidine nucleobases salvage I
AFA_RS03320	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AFA_RS03340	PWY-5386	methylglyoxal degradation I
AFA_RS03345	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AFA_RS03345	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AFA_RS03345	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AFA_RS03345	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AFA_RS03345	PWY-6978	plastoquinol-9 biosynthesis II
AFA_RS03365	PWY-1281	sulfoacetaldehyde degradation I
AFA_RS03365	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AFA_RS03365	PWY-5482	pyruvate fermentation to acetate II
AFA_RS03365	PWY-5485	pyruvate fermentation to acetate IV
AFA_RS03365	PWY-5497	purine nucleobases degradation II (anaerobic)
AFA_RS03365	PWY-6637	sulfolactate degradation II
AFA_RS03365	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AFA_RS03380	PWY-2201	folate transformations I
AFA_RS03385	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AFA_RS03385	PWY-5723	Rubisco shunt
AFA_RS03385	PWY-6891	thiazole biosynthesis II (Bacillus)
AFA_RS03385	PWY-6892	thiazole biosynthesis I (E. coli)
AFA_RS03385	PWY-6901	superpathway of glucose and xylose degradation
AFA_RS03385	PWY-7560	methylerythritol phosphate pathway II
AFA_RS03390	PWY-1042	glycolysis IV (plant cytosol)
AFA_RS03390	PWY-5484	glycolysis II (from fructose 6-phosphate)
AFA_RS03390	PWY-6901	superpathway of glucose and xylose degradation
AFA_RS03390	PWY-7003	glycerol degradation to butanol
AFA_RS03395	PWY-1042	glycolysis IV (plant cytosol)
AFA_RS03395	PWY-5484	glycolysis II (from fructose 6-phosphate)
AFA_RS03395	PWY-6886	1-butanol autotrophic biosynthesis
AFA_RS03395	PWY-6901	superpathway of glucose and xylose degradation
AFA_RS03395	PWY-7003	glycerol degradation to butanol
AFA_RS03425	PWY-1042	glycolysis IV (plant cytosol)
AFA_RS03425	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AFA_RS03425	PWY-5484	glycolysis II (from fructose 6-phosphate)
AFA_RS03425	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AFA_RS03425	PWY-7385	1,3-propanediol biosynthesis (engineered)
AFA_RS03430	PWY-6123	inosine-5'-phosphate biosynthesis I
AFA_RS03430	PWY-6124	inosine-5'-phosphate biosynthesis II
AFA_RS03430	PWY-7234	inosine-5'-phosphate biosynthesis III
AFA_RS03435	PWY-6123	inosine-5'-phosphate biosynthesis I
AFA_RS03435	PWY-7234	inosine-5'-phosphate biosynthesis III
AFA_RS03475	PWY-4041	&gamma;-glutamyl cycle
AFA_RS03475	PWY-5826	hypoglycin biosynthesis
AFA_RS03480	PWY-2201	folate transformations I
AFA_RS03480	PWY-5497	purine nucleobases degradation II (anaerobic)
AFA_RS03495	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AFA_RS03495	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AFA_RS03515	PWY-5958	acridone alkaloid biosynthesis
AFA_RS03515	PWY-6543	4-aminobenzoate biosynthesis
AFA_RS03515	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AFA_RS03515	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AFA_RS03570	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AFA_RS03600	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AFA_RS03600	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AFA_RS03600	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AFA_RS03600	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AFA_RS03600	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AFA_RS03600	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AFA_RS03600	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AFA_RS03600	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AFA_RS03605	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AFA_RS03605	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AFA_RS03605	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AFA_RS03605	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AFA_RS03605	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AFA_RS03605	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AFA_RS03605	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AFA_RS03605	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AFA_RS03630	PWY-2201	folate transformations I
AFA_RS03645	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AFA_RS03645	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AFA_RS03650	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AFA_RS03650	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AFA_RS03650	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AFA_RS03655	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AFA_RS03655	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AFA_RS03665	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AFA_RS03665	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AFA_RS03665	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AFA_RS03665	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AFA_RS03670	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AFA_RS03670	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AFA_RS03675	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AFA_RS03675	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AFA_RS03695	PWY-2201	folate transformations I
AFA_RS03695	PWY-5497	purine nucleobases degradation II (anaerobic)
AFA_RS03740	PWY-2301	<i>myo</i>-inositol biosynthesis
AFA_RS03740	PWY-4702	phytate degradation I
AFA_RS03740	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AFA_RS03825	PWY-5386	methylglyoxal degradation I
AFA_RS03865	PWY-5392	reductive TCA cycle II
AFA_RS03865	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AFA_RS03865	PWY-5690	TCA cycle II (plants and fungi)
AFA_RS03865	PWY-5913	TCA cycle VI (obligate autotrophs)
AFA_RS03865	PWY-6728	methylaspartate cycle
AFA_RS03865	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AFA_RS03865	PWY-7254	TCA cycle VII (acetate-producers)
AFA_RS03865	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AFA_RS03890	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AFA_RS03890	PWY-6148	tetrahydromethanopterin biosynthesis
AFA_RS03890	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AFA_RS03890	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AFA_RS03890	PWY-7852	AFA_RS03890
AFA_RS03890	PWY-7853	AFA_RS03890
AFA_RS03910	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AFA_RS03910	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AFA_RS03910	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AFA_RS03920	PWY-2781	<i>cis</i>-zeatin biosynthesis
AFA_RS03975	PWY-1281	sulfoacetaldehyde degradation I
AFA_RS03975	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AFA_RS03975	PWY-5482	pyruvate fermentation to acetate II
AFA_RS03975	PWY-5485	pyruvate fermentation to acetate IV
AFA_RS03975	PWY-5497	purine nucleobases degradation II (anaerobic)
AFA_RS03975	PWY-6637	sulfolactate degradation II
AFA_RS03975	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AFA_RS03990	PWY-2941	L-lysine biosynthesis II
AFA_RS03990	PWY-2942	L-lysine biosynthesis III
AFA_RS03990	PWY-5097	L-lysine biosynthesis VI
AFA_RS04120	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AFA_RS04120	PWY-5723	Rubisco shunt
AFA_RS04125	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AFA_RS04125	PWY-5686	UMP biosynthesis
AFA_RS04125	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AFA_RS04125	PWY-7790	AFA_RS04125
AFA_RS04125	PWY-7791	AFA_RS04125
AFA_RS04130	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AFA_RS04130	PWY-5686	UMP biosynthesis
AFA_RS04130	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AFA_RS04130	PWY-7790	AFA_RS04130
AFA_RS04130	PWY-7791	AFA_RS04130
AFA_RS04175	PWY-6614	tetrahydrofolate biosynthesis
AFA_RS04180	PWY-6749	CMP-legionaminate biosynthesis I
AFA_RS04290	PWY-6803	phosphatidylcholine acyl editing
AFA_RS04290	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AFA_RS04290	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AFA_RS04290	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AFA_RS04290	PWY-7783	AFA_RS04290
AFA_RS04340	PWY-2941	L-lysine biosynthesis II
AFA_RS04340	PWY-2942	L-lysine biosynthesis III
AFA_RS04340	PWY-5097	L-lysine biosynthesis VI
AFA_RS04360	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AFA_RS04420	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AFA_RS04420	PWY-6855	chitin degradation I (archaea)
AFA_RS04420	PWY-6906	chitin derivatives degradation
AFA_RS04430	PWY-4041	&gamma;-glutamyl cycle
AFA_RS04430	PWY-5826	hypoglycin biosynthesis
AFA_RS04470	PWY-5796	malonate decarboxylase activation
AFA_RS04475	PWY-5796	malonate decarboxylase activation
AFA_RS04480	PWY-6060	malonate degradation II (biotin-dependent)
AFA_RS04485	PWY-6060	malonate degradation II (biotin-dependent)
AFA_RS04485	PWY-6679	jadomycin biosynthesis
AFA_RS04485	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AFA_RS04495	PWY-5794	malonate degradation I (biotin-independent)
AFA_RS04495	PWY-6060	malonate degradation II (biotin-dependent)
AFA_RS04500	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AFA_RS04515	PWY-6004	glycine betaine biosynthesis V (from glycine)
AFA_RS04520	PWY-2301	<i>myo</i>-inositol biosynthesis
AFA_RS04520	PWY-4702	phytate degradation I
AFA_RS04520	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AFA_RS04530	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AFA_RS04560	PWY-6679	jadomycin biosynthesis
AFA_RS04560	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AFA_RS04570	PWY-2941	L-lysine biosynthesis II
AFA_RS04570	PWY-2942	L-lysine biosynthesis III
AFA_RS04570	PWY-5097	L-lysine biosynthesis VI
AFA_RS04570	PWY-6559	spermidine biosynthesis II
AFA_RS04570	PWY-6562	norspermidine biosynthesis
AFA_RS04570	PWY-7153	grixazone biosynthesis
AFA_RS04675	PWY-4061	glutathione-mediated detoxification I
AFA_RS04675	PWY-6842	glutathione-mediated detoxification II
AFA_RS04675	PWY-7112	4-hydroxy-2-nonenal detoxification
AFA_RS04675	PWY-7533	gliotoxin biosynthesis
AFA_RS04680	PWY-7731	AFA_RS04680
AFA_RS04700	PWY-6610	adenine and adenosine salvage IV
AFA_RS04795	PWY-5747	2-methylcitrate cycle II
AFA_RS04815	PWY-5747	2-methylcitrate cycle II
AFA_RS04835	PWY-1622	formaldehyde assimilation I (serine pathway)
AFA_RS04835	PWY-5392	reductive TCA cycle II
AFA_RS04835	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AFA_RS04835	PWY-5690	TCA cycle II (plants and fungi)
AFA_RS04835	PWY-5913	TCA cycle VI (obligate autotrophs)
AFA_RS04835	PWY-6728	methylaspartate cycle
AFA_RS04835	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AFA_RS04835	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AFA_RS04835	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AFA_RS04855	PWY-3781	aerobic respiration I (cytochrome c)
AFA_RS04855	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AFA_RS04855	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AFA_RS04855	PWY-5690	TCA cycle II (plants and fungi)
AFA_RS04855	PWY-6728	methylaspartate cycle
AFA_RS04855	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AFA_RS04855	PWY-7254	TCA cycle VII (acetate-producers)
AFA_RS04855	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AFA_RS04860	PWY-3781	aerobic respiration I (cytochrome c)
AFA_RS04860	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AFA_RS04860	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AFA_RS04860	PWY-5690	TCA cycle II (plants and fungi)
AFA_RS04860	PWY-6728	methylaspartate cycle
AFA_RS04860	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AFA_RS04860	PWY-7254	TCA cycle VII (acetate-producers)
AFA_RS04860	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AFA_RS04885	PWY-1281	sulfoacetaldehyde degradation I
AFA_RS04885	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AFA_RS04885	PWY-5482	pyruvate fermentation to acetate II
AFA_RS04885	PWY-5485	pyruvate fermentation to acetate IV
AFA_RS04885	PWY-5497	purine nucleobases degradation II (anaerobic)
AFA_RS04885	PWY-6637	sulfolactate degradation II
AFA_RS04885	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AFA_RS04890	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AFA_RS04895	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AFA_RS04900	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AFA_RS04900	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AFA_RS04990	PWY-5676	acetyl-CoA fermentation to butanoate II
AFA_RS04990	PWY-5741	ethylmalonyl-CoA pathway
AFA_RS04990	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AFA_RS05170	PWY-5350	thiosulfate disproportionation III (rhodanese)
AFA_RS05185	PWY-6891	thiazole biosynthesis II (Bacillus)
AFA_RS05185	PWY-6892	thiazole biosynthesis I (E. coli)
AFA_RS05185	PWY-7560	methylerythritol phosphate pathway II
AFA_RS05190	PWY-5663	tetrahydrobiopterin biosynthesis I
AFA_RS05190	PWY-5664	tetrahydrobiopterin biosynthesis II
AFA_RS05190	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AFA_RS05190	PWY-6703	preQ<sub>0</sub> biosynthesis
AFA_RS05190	PWY-6983	tetrahydrobiopterin biosynthesis III
AFA_RS05190	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AFA_RS05190	PWY-7852	AFA_RS05190
AFA_RS05225	PWY-7294	xylose degradation IV
AFA_RS05225	PWY-7295	L-arabinose degradation IV
AFA_RS05285	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AFA_RS05305	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AFA_RS05305	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
AFA_RS05335	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AFA_RS05335	PWY-5723	Rubisco shunt
AFA_RS05355	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AFA_RS05515	PWY-6216	3-chlorobenzoate degradation II (via protocatechuate)
AFA_RS05515	PWY-6217	3,4-dichlorobenzoate degradation
AFA_RS05525	PWY-7701	AFA_RS05525
AFA_RS05710	PWY-4261	glycerol degradation I
AFA_RS05715	PWY-4261	glycerol degradation I
AFA_RS05715	PWY-6118	glycerol-3-phosphate shuttle
AFA_RS05715	PWY-6952	glycerophosphodiester degradation
AFA_RS05945	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AFA_RS06095	PWY-5316	nicotine biosynthesis
AFA_RS06095	PWY-5381	pyridine nucleotide cycling (plants)
AFA_RS06095	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AFA_RS06095	PWY-7342	superpathway of nicotine biosynthesis
AFA_RS06225	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
AFA_RS06295	PWY-6825	phosphatidylcholine biosynthesis V
AFA_RS06380	PWY-3781	aerobic respiration I (cytochrome c)
AFA_RS06380	PWY-4521	arsenite oxidation I (respiratory)
AFA_RS06380	PWY-6692	Fe(II) oxidation
AFA_RS06380	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AFA_RS06420	PWY-6832	2-aminoethylphosphonate degradation II
AFA_RS06690	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AFA_RS06690	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AFA_RS07225	PWY-6936	seleno-amino acid biosynthesis
AFA_RS07250	PWY-4983	L-citrulline-nitric oxide cycle
AFA_RS07250	PWY-4984	urea cycle
AFA_RS07250	PWY-5	canavanine biosynthesis
AFA_RS07250	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AFA_RS07250	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AFA_RS07320	PWY-4981	L-proline biosynthesis II (from arginine)
AFA_RS07320	PWY-4984	urea cycle
AFA_RS07320	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AFA_RS07350	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AFA_RS07355	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AFA_RS07385	PWY-6854	ethylene biosynthesis III (microbes)
AFA_RS07395	PWY-1361	benzoyl-CoA degradation I (aerobic)
AFA_RS07395	PWY-2361	3-oxoadipate degradation
AFA_RS07395	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AFA_RS07435	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AFA_RS07435	PWY-6853	ethylene biosynthesis II (microbes)
AFA_RS07435	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AFA_RS07500	PWY-7851	AFA_RS07500
AFA_RS07515	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AFA_RS07515	PWY-6167	flavin biosynthesis II (archaea)
AFA_RS07515	PWY-6168	flavin biosynthesis III (fungi)
AFA_RS07515	PWY-7863	AFA_RS07515
AFA_RS07520	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AFA_RS07520	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AFA_RS07525	PWY-6825	phosphatidylcholine biosynthesis V
AFA_RS07695	PWY-5913	TCA cycle VI (obligate autotrophs)
AFA_RS07695	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AFA_RS07695	PWY-6638	sulfolactate degradation III
AFA_RS07695	PWY-6642	(<i>R</i>)-cysteate degradation
AFA_RS07695	PWY-6643	coenzyme M biosynthesis II
AFA_RS07695	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AFA_RS07695	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AFA_RS07695	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AFA_RS07715	PWY-6823	molybdenum cofactor biosynthesis
AFA_RS07715	PWY-6891	thiazole biosynthesis II (Bacillus)
AFA_RS07715	PWY-6892	thiazole biosynthesis I (E. coli)
AFA_RS07715	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AFA_RS07780	PWY-7805	AFA_RS07780
AFA_RS07780	PWY-7807	AFA_RS07780
AFA_RS07825	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AFA_RS07825	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AFA_RS07825	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AFA_RS07830	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AFA_RS07830	PWY-6596	adenosine nucleotides degradation I
AFA_RS07830	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AFA_RS07840	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AFA_RS07940	PWY-6749	CMP-legionaminate biosynthesis I
AFA_RS07945	PWY-6614	tetrahydrofolate biosynthesis
AFA_RS07965	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AFA_RS07965	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AFA_RS07965	PWY-6936	seleno-amino acid biosynthesis
AFA_RS07965	PWY-702	L-methionine biosynthesis II
AFA_RS07980	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AFA_RS07980	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AFA_RS07980	PWY-6936	seleno-amino acid biosynthesis
AFA_RS07980	PWY-702	L-methionine biosynthesis II
AFA_RS08010	PWY-5663	tetrahydrobiopterin biosynthesis I
AFA_RS08010	PWY-5664	tetrahydrobiopterin biosynthesis II
AFA_RS08010	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AFA_RS08010	PWY-6703	preQ<sub>0</sub> biosynthesis
AFA_RS08010	PWY-6983	tetrahydrobiopterin biosynthesis III
AFA_RS08010	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AFA_RS08010	PWY-7852	AFA_RS08010
AFA_RS08025	PWY-5686	UMP biosynthesis
AFA_RS08025	PWY-7790	AFA_RS08025
AFA_RS08025	PWY-7791	AFA_RS08025
AFA_RS08040	PWY-6910	hydroxymethylpyrimidine salvage
AFA_RS08040	PWY-7356	thiamin salvage IV (yeast)
AFA_RS08040	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AFA_RS08065	PWY-723	alkylnitronates degradation
AFA_RS08090	PWY-5386	methylglyoxal degradation I
AFA_RS08230	PWY-6871	3-methylbutanol biosynthesis
AFA_RS08240	PWY-1042	glycolysis IV (plant cytosol)
AFA_RS08240	PWY-1622	formaldehyde assimilation I (serine pathway)
AFA_RS08240	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AFA_RS08240	PWY-5484	glycolysis II (from fructose 6-phosphate)
AFA_RS08240	PWY-5723	Rubisco shunt
AFA_RS08240	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AFA_RS08240	PWY-6886	1-butanol autotrophic biosynthesis
AFA_RS08240	PWY-6901	superpathway of glucose and xylose degradation
AFA_RS08240	PWY-7003	glycerol degradation to butanol
AFA_RS08240	PWY-7124	ethylene biosynthesis V (engineered)
AFA_RS08240	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AFA_RS08260	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AFA_RS08265	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AFA_RS08310	PWY-6854	ethylene biosynthesis III (microbes)
AFA_RS08360	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AFA_RS08395	PWY-5316	nicotine biosynthesis
AFA_RS08395	PWY-7342	superpathway of nicotine biosynthesis
AFA_RS08400	PWY-5316	nicotine biosynthesis
AFA_RS08400	PWY-7342	superpathway of nicotine biosynthesis
AFA_RS08440	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AFA_RS08455	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AFA_RS08510	PWY-5418	phenol degradation I (aerobic)
AFA_RS08510	PWY-6197	chlorinated phenols degradation
AFA_RS08530	PWY-5418	phenol degradation I (aerobic)
AFA_RS08530	PWY-6197	chlorinated phenols degradation
AFA_RS08785	PWY-6823	molybdenum cofactor biosynthesis
AFA_RS08785	PWY-6891	thiazole biosynthesis II (Bacillus)
AFA_RS08785	PWY-6892	thiazole biosynthesis I (E. coli)
AFA_RS08785	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AFA_RS09130	PWY-6167	flavin biosynthesis II (archaea)
AFA_RS09130	PWY-6168	flavin biosynthesis III (fungi)
AFA_RS09130	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AFA_RS09140	PWY-5392	reductive TCA cycle II
AFA_RS09140	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AFA_RS09140	PWY-5690	TCA cycle II (plants and fungi)
AFA_RS09140	PWY-5913	TCA cycle VI (obligate autotrophs)
AFA_RS09140	PWY-6728	methylaspartate cycle
AFA_RS09140	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AFA_RS09140	PWY-7254	TCA cycle VII (acetate-producers)
AFA_RS09140	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AFA_RS09265	PWY-5381	pyridine nucleotide cycling (plants)
AFA_RS09265	PWY-7761	AFA_RS09265
AFA_RS09300	PWY-381	nitrate reduction II (assimilatory)
AFA_RS09300	PWY-5675	nitrate reduction V (assimilatory)
AFA_RS09300	PWY-6549	L-glutamine biosynthesis III
AFA_RS09300	PWY-6963	ammonia assimilation cycle I
AFA_RS09300	PWY-6964	ammonia assimilation cycle II
AFA_RS09390	PWY-3341	L-proline biosynthesis III
AFA_RS09390	PWY-4981	L-proline biosynthesis II (from arginine)
AFA_RS09390	PWY-6344	L-ornithine degradation II (Stickland reaction)
AFA_RS09450	PWY-5392	reductive TCA cycle II
AFA_RS09450	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AFA_RS09450	PWY-5690	TCA cycle II (plants and fungi)
AFA_RS09450	PWY-5913	TCA cycle VI (obligate autotrophs)
AFA_RS09450	PWY-6728	methylaspartate cycle
AFA_RS09450	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AFA_RS09450	PWY-7254	TCA cycle VII (acetate-producers)
AFA_RS09450	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AFA_RS10030	PWY-4202	arsenate detoxification I (glutaredoxin)
AFA_RS10030	PWY-4621	arsenate detoxification II (glutaredoxin)
AFA_RS10120	PWY-5484	glycolysis II (from fructose 6-phosphate)
AFA_RS10130	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AFA_RS10145	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AFA_RS10145	PWY-622	starch biosynthesis
AFA_RS10155	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AFA_RS10155	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AFA_RS10155	PWY-5989	stearate biosynthesis II (bacteria and plants)
AFA_RS10155	PWY-5994	palmitate biosynthesis I (animals and fungi)
AFA_RS10155	PWY-6113	superpathway of mycolate biosynthesis
AFA_RS10155	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AFA_RS10155	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AFA_RS10155	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AFA_RS10155	PWY-7663	gondoate biosynthesis (anaerobic)
AFA_RS10155	PWY-7664	oleate biosynthesis IV (anaerobic)
AFA_RS10155	PWY-7858	AFA_RS10155
AFA_RS10155	PWYG-321	mycolate biosynthesis
AFA_RS10180	PWY-7294	xylose degradation IV
AFA_RS10180	PWY-7295	L-arabinose degradation IV
AFA_RS10180	PWY-7560	methylerythritol phosphate pathway II
AFA_RS10185	PWY-5667	CDP-diacylglycerol biosynthesis I
AFA_RS10185	PWY-5981	CDP-diacylglycerol biosynthesis III
AFA_RS10185	PWY-7817	AFA_RS10185
AFA_RS10215	PWY-7799	AFA_RS10215
AFA_RS10215	PWY-7800	AFA_RS10215
AFA_RS10240	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AFA_RS10240	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AFA_RS10240	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AFA_RS10240	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AFA_RS10255	PWY-2161	folate polyglutamylation
AFA_RS10260	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AFA_RS10260	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AFA_RS10270	PWY-6891	thiazole biosynthesis II (Bacillus)
AFA_RS10270	PWY-6892	thiazole biosynthesis I (E. coli)
AFA_RS10270	PWY-7560	methylerythritol phosphate pathway II
AFA_RS10285	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AFA_RS10285	PWY-2201	folate transformations I
AFA_RS10285	PWY-3841	folate transformations II
AFA_RS10285	PWY-5030	L-histidine degradation III
AFA_RS10285	PWY-5497	purine nucleobases degradation II (anaerobic)
AFA_RS10285	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AFA_RS10340	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AFA_RS10340	PWY-6416	quinate degradation II
AFA_RS10340	PWY-6707	gallate biosynthesis
AFA_RS10475	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AFA_RS10525	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
AFA_RS10525	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AFA_RS10525	PWY-6148	tetrahydromethanopterin biosynthesis
AFA_RS10525	PWY-7742	AFA_RS10525
AFA_RS10525	PWY-7745	AFA_RS10525
AFA_RS10550	PWY-4983	L-citrulline-nitric oxide cycle
AFA_RS10550	PWY-4984	urea cycle
AFA_RS10550	PWY-5	canavanine biosynthesis
AFA_RS10550	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AFA_RS10550	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AFA_RS10590	PWY-5381	pyridine nucleotide cycling (plants)
AFA_RS10590	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AFA_RS10590	PWY-6596	adenosine nucleotides degradation I
AFA_RS10590	PWY-6606	guanosine nucleotides degradation II
AFA_RS10590	PWY-6607	guanosine nucleotides degradation I
AFA_RS10590	PWY-6608	guanosine nucleotides degradation III
AFA_RS10590	PWY-7185	UTP and CTP dephosphorylation I
AFA_RS10590	PWY-7821	AFA_RS10590
AFA_RS10600	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AFA_RS10600	PWY-5368	dimorphecolate biosynthesis
AFA_RS10600	PWY-5995	linoleate biosynthesis I (plants)
AFA_RS10600	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AFA_RS10600	PWY-6803	phosphatidylcholine acyl editing
AFA_RS10600	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AFA_RS10600	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
AFA_RS10600	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AFA_RS10600	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AFA_RS10600	PWY-7470	phosphatidylcholine biosynthesis VII
AFA_RS10600	PWY-7618	ricinoleate biosynthesis
AFA_RS10685	PWY-6891	thiazole biosynthesis II (Bacillus)
AFA_RS10685	PWY-6892	thiazole biosynthesis I (E. coli)
AFA_RS10690	PWY-1281	sulfoacetaldehyde degradation I
AFA_RS10690	PWY-6637	sulfolactate degradation II
AFA_RS10695	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
AFA_RS10700	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
AFA_RS10710	PWY-1281	sulfoacetaldehyde degradation I
AFA_RS10710	PWY-5482	pyruvate fermentation to acetate II
AFA_RS10710	PWY-5485	pyruvate fermentation to acetate IV
AFA_RS10710	PWY-5497	purine nucleobases degradation II (anaerobic)
AFA_RS10710	PWY-6637	sulfolactate degradation II
AFA_RS10790	PWY-2941	L-lysine biosynthesis II
AFA_RS10790	PWY-2942	L-lysine biosynthesis III
AFA_RS10790	PWY-5097	L-lysine biosynthesis VI
AFA_RS10790	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AFA_RS10790	PWY-6559	spermidine biosynthesis II
AFA_RS10790	PWY-6562	norspermidine biosynthesis
AFA_RS10790	PWY-7153	grixazone biosynthesis
AFA_RS10790	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AFA_RS10795	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AFA_RS10835	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AFA_RS10865	PWY-702	L-methionine biosynthesis II
AFA_RS10945	PWY-7805	AFA_RS10945
AFA_RS10945	PWY-7807	AFA_RS10945
AFA_RS10960	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AFA_RS10960	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AFA_RS10965	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AFA_RS10965	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AFA_RS10975	PWY-5392	reductive TCA cycle II
AFA_RS10975	PWY-5537	pyruvate fermentation to acetate V
AFA_RS10975	PWY-5538	pyruvate fermentation to acetate VI
AFA_RS10975	PWY-5690	TCA cycle II (plants and fungi)
AFA_RS10975	PWY-5913	TCA cycle VI (obligate autotrophs)
AFA_RS10975	PWY-6728	methylaspartate cycle
AFA_RS10975	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AFA_RS10975	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AFA_RS10980	PWY-5392	reductive TCA cycle II
AFA_RS10980	PWY-5537	pyruvate fermentation to acetate V
AFA_RS10980	PWY-5538	pyruvate fermentation to acetate VI
AFA_RS10980	PWY-5690	TCA cycle II (plants and fungi)
AFA_RS10980	PWY-5913	TCA cycle VI (obligate autotrophs)
AFA_RS10980	PWY-6728	methylaspartate cycle
AFA_RS10980	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AFA_RS10980	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AFA_RS10990	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AFA_RS10990	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AFA_RS10990	PWY-6936	seleno-amino acid biosynthesis
AFA_RS10990	PWY-702	L-methionine biosynthesis II
AFA_RS11055	PWY-5642	2,4-dinitrotoluene degradation
AFA_RS11055	PWY-6373	acrylate degradation
AFA_RS11060	PWY-5686	UMP biosynthesis
AFA_RS11060	PWY-7790	AFA_RS11060
AFA_RS11060	PWY-7791	AFA_RS11060
AFA_RS11090	PWY-723	alkylnitronates degradation
AFA_RS11220	PWY-5194	siroheme biosynthesis
AFA_RS11220	PWY-5196	factor 430 biosynthesis
AFA_RS11220	PWY-5441	S-methyl-L-methionine cycle
AFA_RS11220	PWY-702	L-methionine biosynthesis II
AFA_RS11220	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AFA_RS11260	PWY-5194	siroheme biosynthesis
AFA_RS11260	PWY-5196	factor 430 biosynthesis
AFA_RS11260	PWY-5441	S-methyl-L-methionine cycle
AFA_RS11260	PWY-702	L-methionine biosynthesis II
AFA_RS11260	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AFA_RS11460	PWY-5497	purine nucleobases degradation II (anaerobic)
AFA_RS11460	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AFA_RS11460	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AFA_RS11460	PWY-6596	adenosine nucleotides degradation I
AFA_RS11460	PWY-6606	guanosine nucleotides degradation II
AFA_RS11460	PWY-6607	guanosine nucleotides degradation I
AFA_RS11460	PWY-6608	guanosine nucleotides degradation III
AFA_RS11460	PWY-6999	theophylline degradation
AFA_RS11465	PWY-5497	purine nucleobases degradation II (anaerobic)
AFA_RS11465	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AFA_RS11465	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AFA_RS11465	PWY-6596	adenosine nucleotides degradation I
AFA_RS11465	PWY-6606	guanosine nucleotides degradation II
AFA_RS11465	PWY-6607	guanosine nucleotides degradation I
AFA_RS11465	PWY-6608	guanosine nucleotides degradation III
AFA_RS11465	PWY-6999	theophylline degradation
AFA_RS11475	PWY-5497	purine nucleobases degradation II (anaerobic)
AFA_RS11475	PWY-6606	guanosine nucleotides degradation II
AFA_RS11475	PWY-6608	guanosine nucleotides degradation III
AFA_RS11475	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AFA_RS11480	PWY-6825	phosphatidylcholine biosynthesis V
AFA_RS11515	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AFA_RS11580	PWY-2201	folate transformations I
AFA_RS11585	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AFA_RS11585	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AFA_RS11585	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AFA_RS11585	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AFA_RS11585	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AFA_RS11585	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AFA_RS11585	PWY-7205	CMP phosphorylation
AFA_RS11585	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AFA_RS11585	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AFA_RS11585	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AFA_RS11585	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AFA_RS11585	PWY-7224	purine deoxyribonucleosides salvage
AFA_RS11585	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AFA_RS11585	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AFA_RS11600	PWY-6829	tRNA methylation (yeast)
AFA_RS11600	PWY-7285	methylwyosine biosynthesis
AFA_RS11600	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AFA_RS11635	PWY-5691	urate degradation to allantoin I
AFA_RS11635	PWY-7394	urate degradation to allantoin II
AFA_RS11635	PWY-7849	AFA_RS11635
AFA_RS11690	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AFA_RS11760	PWY-3781	aerobic respiration I (cytochrome c)
AFA_RS11760	PWY-4521	arsenite oxidation I (respiratory)
AFA_RS11760	PWY-6692	Fe(II) oxidation
AFA_RS11760	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AFA_RS11780	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AFA_RS11785	PWY-6700	queuosine biosynthesis
AFA_RS11795	PWY-5269	cardiolipin biosynthesis II
AFA_RS11795	PWY-5668	cardiolipin biosynthesis I
AFA_RS11795	PWY-7817	AFA_RS11795
AFA_RS11805	PWY-6902	chitin degradation II
AFA_RS11805	PWY-7822	AFA_RS11805
AFA_RS11810	PWY-6012	acyl carrier protein metabolism I
AFA_RS11810	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AFA_RS11815	PWY-1341	phenylacetate degradation II (anaerobic)
AFA_RS11815	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AFA_RS11815	PWY-7716	AFA_RS11815
AFA_RS11855	PWY-5176	coumarin biosynthesis (via 2-coumarate)
AFA_RS11925	PWY-6936	seleno-amino acid biosynthesis
AFA_RS11965	PWY-7205	CMP phosphorylation
AFA_RS11970	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AFA_RS11975	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AFA_RS11980	PWY-3461	L-tyrosine biosynthesis II
AFA_RS11980	PWY-3462	L-phenylalanine biosynthesis II
AFA_RS11980	PWY-6120	L-tyrosine biosynthesis III
AFA_RS11980	PWY-6627	salinosporamide A biosynthesis
AFA_RS11980	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AFA_RS11980	PWY-7626	bacilysin biosynthesis
AFA_RS12000	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AFA_RS12000	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AFA_RS12000	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AFA_RS12000	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AFA_RS12000	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AFA_RS12000	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AFA_RS12000	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AFA_RS12000	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AFA_RS12000	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AFA_RS12000	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AFA_RS12005	PWY-181	photorespiration
AFA_RS12430	PWY-5278	sulfite oxidation III
AFA_RS12430	PWY-5340	sulfate activation for sulfonation
AFA_RS12430	PWY-6683	sulfate reduction III (assimilatory)
AFA_RS12430	PWY-6932	selenate reduction
AFA_RS12450	PWY-6834	spermidine biosynthesis III
AFA_RS12490	PWY-6168	flavin biosynthesis III (fungi)
AFA_RS12490	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AFA_RS12535	PWY-6123	inosine-5'-phosphate biosynthesis I
AFA_RS12535	PWY-6124	inosine-5'-phosphate biosynthesis II
AFA_RS12535	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AFA_RS12535	PWY-7234	inosine-5'-phosphate biosynthesis III
AFA_RS12570	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AFA_RS12570	PWY-6164	3-dehydroquinate biosynthesis I
AFA_RS12570	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AFA_RS12620	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AFA_RS12620	PWY-6416	quinate degradation II
AFA_RS12620	PWY-6707	gallate biosynthesis
AFA_RS12625	PWY-6409	pyoverdine I biosynthesis
AFA_RS12625	PWY-6562	norspermidine biosynthesis
AFA_RS12625	PWY-761	rhizobactin 1021 biosynthesis
AFA_RS12625	PWY-7855	AFA_RS12625
AFA_RS12670	PWY-5484	glycolysis II (from fructose 6-phosphate)
AFA_RS12705	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AFA_RS12705	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AFA_RS12705	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AFA_RS12710	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AFA_RS12715	PWY-5381	pyridine nucleotide cycling (plants)
AFA_RS12715	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AFA_RS12715	PWY-7761	AFA_RS12715
AFA_RS12725	PWY-6825	phosphatidylcholine biosynthesis V
AFA_RS12770	PWY-7560	methylerythritol phosphate pathway II
AFA_RS12850	PWY-3341	L-proline biosynthesis III
AFA_RS12850	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AFA_RS12860	PWY-6825	phosphatidylcholine biosynthesis V
AFA_RS12885	PWY-1042	glycolysis IV (plant cytosol)
AFA_RS12885	PWY-1622	formaldehyde assimilation I (serine pathway)
AFA_RS12885	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AFA_RS12885	PWY-5484	glycolysis II (from fructose 6-phosphate)
AFA_RS12885	PWY-5723	Rubisco shunt
AFA_RS12885	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AFA_RS12885	PWY-6886	1-butanol autotrophic biosynthesis
AFA_RS12885	PWY-6901	superpathway of glucose and xylose degradation
AFA_RS12885	PWY-7003	glycerol degradation to butanol
AFA_RS12885	PWY-7124	ethylene biosynthesis V (engineered)
AFA_RS12885	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AFA_RS12910	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AFA_RS12910	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AFA_RS12915	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AFA_RS12915	PWY-7177	UTP and CTP dephosphorylation II
AFA_RS12915	PWY-7185	UTP and CTP dephosphorylation I
AFA_RS12950	PWY-5132	humulone biosynthesis
AFA_RS12950	PWY-5133	cohumulone biosynthesis
AFA_RS12950	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AFA_RS12950	PWY-7118	chitin degradation to ethanol
AFA_RS12950	PWY-7857	AFA_RS12950
AFA_RS12975	PWY-5642	2,4-dinitrotoluene degradation
AFA_RS12975	PWY-6373	acrylate degradation
AFA_RS13035	PWY-6936	seleno-amino acid biosynthesis
AFA_RS13035	PWY-7274	D-cycloserine biosynthesis
AFA_RS13110	PWY-5367	petroselinate biosynthesis
AFA_RS13110	PWY-5515	L-arabinose degradation II
AFA_RS13110	PWY-5525	D-glucuronate degradation I
AFA_RS13110	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AFA_RS13110	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AFA_RS13110	PWY-5989	stearate biosynthesis II (bacteria and plants)
AFA_RS13110	PWY-5994	palmitate biosynthesis I (animals and fungi)
AFA_RS13110	PWY-6113	superpathway of mycolate biosynthesis
AFA_RS13110	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AFA_RS13110	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AFA_RS13110	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AFA_RS13110	PWY-7663	gondoate biosynthesis (anaerobic)
AFA_RS13110	PWY-7664	oleate biosynthesis IV (anaerobic)
AFA_RS13110	PWY-7858	AFA_RS13110
AFA_RS13110	PWYG-321	mycolate biosynthesis
AFA_RS13115	PWY-4381	fatty acid biosynthesis initiation I
AFA_RS13115	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AFA_RS13115	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AFA_RS13120	PWY-4381	fatty acid biosynthesis initiation I
AFA_RS13145	PWY-2201	folate transformations I
AFA_RS13180	PWY-6679	jadomycin biosynthesis
AFA_RS13180	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AFA_RS13205	PWY-5381	pyridine nucleotide cycling (plants)
AFA_RS13305	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AFA_RS13305	PWY-5368	dimorphecolate biosynthesis
AFA_RS13305	PWY-5995	linoleate biosynthesis I (plants)
AFA_RS13305	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AFA_RS13305	PWY-6803	phosphatidylcholine acyl editing
AFA_RS13305	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AFA_RS13305	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
AFA_RS13305	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AFA_RS13305	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AFA_RS13305	PWY-7470	phosphatidylcholine biosynthesis VII
AFA_RS13305	PWY-7618	ricinoleate biosynthesis
AFA_RS13320	PWY-7560	methylerythritol phosphate pathway II
AFA_RS13325	PWY-7560	methylerythritol phosphate pathway II
AFA_RS13345	PWY-723	alkylnitronates degradation
AFA_RS13360	PWY-3781	aerobic respiration I (cytochrome c)
AFA_RS13360	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AFA_RS13360	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AFA_RS13360	PWY-6692	Fe(II) oxidation
AFA_RS13440	PWY-1042	glycolysis IV (plant cytosol)
AFA_RS13440	PWY-5484	glycolysis II (from fructose 6-phosphate)
AFA_RS13440	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AFA_RS13440	PWY-7003	glycerol degradation to butanol
AFA_RS13475	PWY-5669	phosphatidylethanolamine biosynthesis I
AFA_RS13480	PWY-5103	L-isoleucine biosynthesis III
AFA_RS13480	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AFA_RS13485	PWY-5101	L-isoleucine biosynthesis II
AFA_RS13485	PWY-5103	L-isoleucine biosynthesis III
AFA_RS13485	PWY-5104	L-isoleucine biosynthesis IV
AFA_RS13485	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AFA_RS13485	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AFA_RS13485	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AFA_RS13485	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AFA_RS13490	PWY-5101	L-isoleucine biosynthesis II
AFA_RS13490	PWY-5103	L-isoleucine biosynthesis III
AFA_RS13490	PWY-5104	L-isoleucine biosynthesis IV
AFA_RS13490	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AFA_RS13490	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AFA_RS13490	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AFA_RS13490	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AFA_RS13530	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AFA_RS13600	PWY-5913	TCA cycle VI (obligate autotrophs)
AFA_RS13600	PWY-6549	L-glutamine biosynthesis III
AFA_RS13600	PWY-6728	methylaspartate cycle
AFA_RS13600	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AFA_RS13600	PWY-7124	ethylene biosynthesis V (engineered)
AFA_RS13600	PWY-7254	TCA cycle VII (acetate-producers)
AFA_RS13600	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AFA_RS13770	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AFA_RS13770	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AFA_RS13770	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AFA_RS13790	PWY-2941	L-lysine biosynthesis II
AFA_RS13790	PWY-2942	L-lysine biosynthesis III
AFA_RS13790	PWY-5097	L-lysine biosynthesis VI
AFA_RS13800	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AFA_RS13800	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AFA_RS13860	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AFA_RS13860	PWY-6853	ethylene biosynthesis II (microbes)
AFA_RS13860	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AFA_RS13930	PWY-6690	cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate
AFA_RS13945	PWY-5162	2-oxopentenoate degradation
AFA_RS13945	PWY-5436	L-threonine degradation IV
AFA_RS13945	PWY-5480	pyruvate fermentation to ethanol I
AFA_RS13945	PWY-6587	pyruvate fermentation to ethanol III
AFA_RS13945	PWY-7085	triethylamine degradation
AFA_RS13945	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AFA_RS13950	PWY-5162	2-oxopentenoate degradation
AFA_RS13970	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AFA_RS14010	PWY-5676	acetyl-CoA fermentation to butanoate II
AFA_RS14010	PWY-5741	ethylmalonyl-CoA pathway
AFA_RS14010	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AFA_RS14055	PWY-6703	preQ<sub>0</sub> biosynthesis
AFA_RS14060	PWY-1622	formaldehyde assimilation I (serine pathway)
AFA_RS14060	PWY-181	photorespiration
AFA_RS14060	PWY-2161	folate polyglutamylation
AFA_RS14060	PWY-2201	folate transformations I
AFA_RS14060	PWY-3661	glycine betaine degradation I
AFA_RS14060	PWY-3661-1	glycine betaine degradation II (mammalian)
AFA_RS14060	PWY-3841	folate transformations II
AFA_RS14060	PWY-5497	purine nucleobases degradation II (anaerobic)
AFA_RS14075	PWY-1622	formaldehyde assimilation I (serine pathway)
AFA_RS14075	PWY-181	photorespiration
AFA_RS14075	PWY-2161	folate polyglutamylation
AFA_RS14075	PWY-2201	folate transformations I
AFA_RS14075	PWY-3661	glycine betaine degradation I
AFA_RS14075	PWY-3661-1	glycine betaine degradation II (mammalian)
AFA_RS14075	PWY-3841	folate transformations II
AFA_RS14075	PWY-5497	purine nucleobases degradation II (anaerobic)
AFA_RS14095	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AFA_RS14095	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AFA_RS14165	PWY-3781	aerobic respiration I (cytochrome c)
AFA_RS14165	PWY-4521	arsenite oxidation I (respiratory)
AFA_RS14165	PWY-6692	Fe(II) oxidation
AFA_RS14165	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AFA_RS14190	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AFA_RS14190	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AFA_RS14205	PWY-7782	AFA_RS14205
AFA_RS14205	PWY-7783	AFA_RS14205
AFA_RS14315	PWY-5392	reductive TCA cycle II
AFA_RS14315	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AFA_RS14315	PWY-5690	TCA cycle II (plants and fungi)
AFA_RS14315	PWY-5913	TCA cycle VI (obligate autotrophs)
AFA_RS14315	PWY-6728	methylaspartate cycle
AFA_RS14315	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AFA_RS14315	PWY-7254	TCA cycle VII (acetate-producers)
AFA_RS14315	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AFA_RS14335	PWY-7801	AFA_RS14335
AFA_RS14340	PWY-7799	AFA_RS14340
AFA_RS14345	PWY-5686	UMP biosynthesis
AFA_RS14435	PWY-6123	inosine-5'-phosphate biosynthesis I
AFA_RS14435	PWY-6124	inosine-5'-phosphate biosynthesis II
AFA_RS14435	PWY-7234	inosine-5'-phosphate biosynthesis III
AFA_RS14465	PWY-5686	UMP biosynthesis
AFA_RS14465	PWY-7790	AFA_RS14465
AFA_RS14465	PWY-7791	AFA_RS14465
AFA_RS14690	PWY-2942	L-lysine biosynthesis III
AFA_RS14740	PWY-5278	sulfite oxidation III
AFA_RS14740	PWY-5340	sulfate activation for sulfonation
AFA_RS14740	PWY-6683	sulfate reduction III (assimilatory)
AFA_RS14740	PWY-6932	selenate reduction
AFA_RS14745	PWY-5278	sulfite oxidation III
AFA_RS14745	PWY-5340	sulfate activation for sulfonation
AFA_RS14745	PWY-6683	sulfate reduction III (assimilatory)
AFA_RS14745	PWY-6932	selenate reduction
AFA_RS14775	PWY-5482	pyruvate fermentation to acetate II
AFA_RS14775	PWY-5485	pyruvate fermentation to acetate IV
AFA_RS14775	PWY-5497	purine nucleobases degradation II (anaerobic)
AFA_RS14780	PWY-1281	sulfoacetaldehyde degradation I
AFA_RS14780	PWY-5482	pyruvate fermentation to acetate II
AFA_RS14780	PWY-5485	pyruvate fermentation to acetate IV
AFA_RS14780	PWY-5497	purine nucleobases degradation II (anaerobic)
AFA_RS14780	PWY-6637	sulfolactate degradation II
AFA_RS14805	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AFA_RS14825	PWY-7039	phosphatidate metabolism, as a signaling molecule
AFA_RS14825	PWY-7817	AFA_RS14825
AFA_RS14830	PWY-5686	UMP biosynthesis
AFA_RS14830	PWY-7790	AFA_RS14830
AFA_RS14830	PWY-7791	AFA_RS14830
AFA_RS14855	PWY-5269	cardiolipin biosynthesis II
AFA_RS14855	PWY-5668	cardiolipin biosynthesis I
AFA_RS14855	PWY-7817	AFA_RS14855
AFA_RS14860	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AFA_RS14860	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AFA_RS14860	PWY-6896	thiamin salvage I
AFA_RS14860	PWY-6897	thiamin salvage II
AFA_RS14870	PWY-6167	flavin biosynthesis II (archaea)
AFA_RS14870	PWY-6168	flavin biosynthesis III (fungi)
AFA_RS14875	PWY-6167	flavin biosynthesis II (archaea)
AFA_RS14875	PWY-6168	flavin biosynthesis III (fungi)
AFA_RS14875	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AFA_RS14900	PWY-7851	AFA_RS14900
AFA_RS15060	PWY-6938	NADH repair
AFA_RS15205	PWY-5386	methylglyoxal degradation I
AFA_RS15215	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AFA_RS15215	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AFA_RS15215	PWY-5989	stearate biosynthesis II (bacteria and plants)
AFA_RS15215	PWY-6113	superpathway of mycolate biosynthesis
AFA_RS15215	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AFA_RS15215	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AFA_RS15215	PWY-7663	gondoate biosynthesis (anaerobic)
AFA_RS15215	PWY-7664	oleate biosynthesis IV (anaerobic)
AFA_RS15215	PWY-7858	AFA_RS15215
AFA_RS15215	PWYG-321	mycolate biosynthesis
AFA_RS15265	PWY-5331	taurine biosynthesis
AFA_RS15275	PWY-5392	reductive TCA cycle II
AFA_RS15275	PWY-5537	pyruvate fermentation to acetate V
AFA_RS15275	PWY-5538	pyruvate fermentation to acetate VI
AFA_RS15275	PWY-5690	TCA cycle II (plants and fungi)
AFA_RS15275	PWY-5913	TCA cycle VI (obligate autotrophs)
AFA_RS15275	PWY-6728	methylaspartate cycle
AFA_RS15275	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AFA_RS15275	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AFA_RS15335	PWY-7782	AFA_RS15335
AFA_RS15335	PWY-7783	AFA_RS15335
AFA_RS15410	PWY-4202	arsenate detoxification I (glutaredoxin)
AFA_RS15410	PWY-4621	arsenate detoxification II (glutaredoxin)
AFA_RS15470	PWY-5525	D-glucuronate degradation I
AFA_RS15480	PWY-1622	formaldehyde assimilation I (serine pathway)
AFA_RS15480	PWY-181	photorespiration
AFA_RS15480	PWY-2161	folate polyglutamylation
AFA_RS15480	PWY-2201	folate transformations I
AFA_RS15480	PWY-3661	glycine betaine degradation I
AFA_RS15480	PWY-3661-1	glycine betaine degradation II (mammalian)
AFA_RS15480	PWY-3841	folate transformations II
AFA_RS15480	PWY-5497	purine nucleobases degradation II (anaerobic)
AFA_RS15525	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AFA_RS15525	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AFA_RS15565	PWY-5392	reductive TCA cycle II
AFA_RS15565	PWY-5537	pyruvate fermentation to acetate V
AFA_RS15565	PWY-5538	pyruvate fermentation to acetate VI
AFA_RS15565	PWY-5690	TCA cycle II (plants and fungi)
AFA_RS15565	PWY-5913	TCA cycle VI (obligate autotrophs)
AFA_RS15565	PWY-6728	methylaspartate cycle
AFA_RS15565	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AFA_RS15565	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AFA_RS15585	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AFA_RS15655	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AFA_RS15655	PWY-6416	quinate degradation II
AFA_RS15655	PWY-6707	gallate biosynthesis
AFA_RS15685	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AFA_RS15730	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AFA_RS15730	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AFA_RS15730	PWY-6897	thiamin salvage II
AFA_RS15730	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AFA_RS15730	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AFA_RS15730	PWY-7356	thiamin salvage IV (yeast)
AFA_RS15730	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AFA_RS15735	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AFA_RS15750	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AFA_RS15780	PWY-3341	L-proline biosynthesis III
AFA_RS15780	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AFA_RS15805	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AFA_RS15885	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AFA_RS15895	PWY-5686	UMP biosynthesis
AFA_RS15895	PWY-7790	AFA_RS15895
AFA_RS15895	PWY-7791	AFA_RS15895
AFA_RS15925	PWY-6523	nitrite-dependent anaerobic methane oxidation
AFA_RS15925	PWY-6748	nitrate reduction VII (denitrification)
AFA_RS15925	PWY-7084	nitrifier denitrification
AFA_RS15945	PWY-5392	reductive TCA cycle II
AFA_RS15945	PWY-5537	pyruvate fermentation to acetate V
AFA_RS15945	PWY-5538	pyruvate fermentation to acetate VI
AFA_RS15945	PWY-5690	TCA cycle II (plants and fungi)
AFA_RS15945	PWY-5913	TCA cycle VI (obligate autotrophs)
AFA_RS15945	PWY-6728	methylaspartate cycle
AFA_RS15945	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AFA_RS15945	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AFA_RS15955	PWY-3781	aerobic respiration I (cytochrome c)
AFA_RS15955	PWY-4521	arsenite oxidation I (respiratory)
AFA_RS15955	PWY-6692	Fe(II) oxidation
AFA_RS15955	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AFA_RS16045	PWY-6502	oxidized GTP and dGTP detoxification
AFA_RS16045	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AFA_RS16045	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AFA_RS16045	PWY-6897	thiamin salvage II
AFA_RS16045	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AFA_RS16045	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AFA_RS16045	PWY-7356	thiamin salvage IV (yeast)
AFA_RS16045	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AFA_RS16080	PWY-7851	AFA_RS16080
AFA_RS16135	PWY-2201	folate transformations I
AFA_RS16135	PWY-3841	folate transformations II
AFA_RS16170	PWY-6891	thiazole biosynthesis II (Bacillus)
AFA_RS16170	PWY-6892	thiazole biosynthesis I (E. coli)
AFA_RS16175	PWY-6910	hydroxymethylpyrimidine salvage
AFA_RS16175	PWY-7356	thiamin salvage IV (yeast)
AFA_RS16175	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AFA_RS16180	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AFA_RS16180	PWY-6153	autoinducer AI-2 biosynthesis I
AFA_RS16180	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AFA_RS16220	PWY-5839	menaquinol-7 biosynthesis
AFA_RS16220	PWY-5844	menaquinol-9 biosynthesis
AFA_RS16220	PWY-5849	menaquinol-6 biosynthesis
AFA_RS16220	PWY-5890	menaquinol-10 biosynthesis
AFA_RS16220	PWY-5891	menaquinol-11 biosynthesis
AFA_RS16220	PWY-5892	menaquinol-12 biosynthesis
AFA_RS16220	PWY-5895	menaquinol-13 biosynthesis
AFA_RS16290	PWY-6605	adenine and adenosine salvage II
AFA_RS16290	PWY-6610	adenine and adenosine salvage IV
AFA_RS16290	PWY-7805	AFA_RS16290
AFA_RS16290	PWY-7807	AFA_RS16290
AFA_RS16305	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
AFA_RS16330	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AFA_RS16330	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AFA_RS16375	PWY-2201	folate transformations I
AFA_RS16385	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
AFA_RS16400	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AFA_RS16400	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AFA_RS16425	PWY-1622	formaldehyde assimilation I (serine pathway)
AFA_RS16425	PWY-5484	glycolysis II (from fructose 6-phosphate)
AFA_RS16445	PWY-5667	CDP-diacylglycerol biosynthesis I
AFA_RS16445	PWY-5981	CDP-diacylglycerol biosynthesis III
AFA_RS16455	PWY-6004	glycine betaine biosynthesis V (from glycine)
AFA_RS16470	PWY-6167	flavin biosynthesis II (archaea)
AFA_RS16470	PWY-6168	flavin biosynthesis III (fungi)
AFA_RS16490	PWY-6825	phosphatidylcholine biosynthesis V
AFA_RS16505	PWY-3821	galactose degradation III
AFA_RS16505	PWY-6317	galactose degradation I (Leloir pathway)
AFA_RS16505	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AFA_RS16505	PWY-6527	stachyose degradation
AFA_RS16505	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AFA_RS16505	PWY-7344	UDP-D-galactose biosynthesis
AFA_RS16510	PWY-5033	nicotinate degradation II
AFA_RS16510	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AFA_RS16510	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AFA_RS16510	PWY-6993	nicotine degradation II (pyrrolidine pathway)
AFA_RS16510	PWY-7128	nicotine degradation III (VPP pathway)
AFA_RS16510	PWY-722	nicotinate degradation I
AFA_RS16575	PWY-3221	dTDP-L-rhamnose biosynthesis II
AFA_RS16575	PWY-6808	dTDP-D-forosamine biosynthesis
AFA_RS16575	PWY-6942	dTDP-D-desosamine biosynthesis
AFA_RS16575	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AFA_RS16575	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AFA_RS16575	PWY-6974	dTDP-L-olivose biosynthesis
AFA_RS16575	PWY-6976	dTDP-L-mycarose biosynthesis
AFA_RS16575	PWY-7104	dTDP-L-megosamine biosynthesis
AFA_RS16575	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AFA_RS16575	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AFA_RS16575	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AFA_RS16575	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AFA_RS16575	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AFA_RS16575	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AFA_RS16575	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AFA_RS16575	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AFA_RS16575	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AFA_RS16575	PWY-7688	AFA_RS16575
AFA_RS16575	PWY-7814	AFA_RS16575
AFA_RS16580	PWY-3221	dTDP-L-rhamnose biosynthesis II
AFA_RS16580	PWY-6808	dTDP-D-forosamine biosynthesis
AFA_RS16580	PWY-6942	dTDP-D-desosamine biosynthesis
AFA_RS16580	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AFA_RS16580	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AFA_RS16580	PWY-6974	dTDP-L-olivose biosynthesis
AFA_RS16580	PWY-6976	dTDP-L-mycarose biosynthesis
AFA_RS16580	PWY-7104	dTDP-L-megosamine biosynthesis
AFA_RS16580	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AFA_RS16580	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AFA_RS16580	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AFA_RS16580	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AFA_RS16580	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AFA_RS16580	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AFA_RS16580	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AFA_RS16580	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AFA_RS16580	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AFA_RS16580	PWY-7688	AFA_RS16580
AFA_RS16580	PWY-7814	AFA_RS16580
AFA_RS16600	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AFA_RS16610	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AFA_RS16650	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AFA_RS16650	PWY-6148	tetrahydromethanopterin biosynthesis
AFA_RS16650	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AFA_RS16650	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AFA_RS16680	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AFA_RS16725	PWY-6854	ethylene biosynthesis III (microbes)
AFA_RS16895	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AFA_RS16910	PWY-6748	nitrate reduction VII (denitrification)
AFA_RS16910	PWY-7084	nitrifier denitrification
AFA_RS16940	PWY-3801	sucrose degradation II (sucrose synthase)
AFA_RS16940	PWY-5054	sorbitol biosynthesis I
AFA_RS16940	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AFA_RS16940	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AFA_RS16940	PWY-5659	GDP-mannose biosynthesis
AFA_RS16940	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AFA_RS16940	PWY-621	sucrose degradation III (sucrose invertase)
AFA_RS16940	PWY-622	starch biosynthesis
AFA_RS16940	PWY-6981	chitin biosynthesis
AFA_RS16940	PWY-6992	1,5-anhydrofructose degradation
AFA_RS16940	PWY-7238	sucrose biosynthesis II
AFA_RS16940	PWY-7347	sucrose biosynthesis III
AFA_RS16940	PWY-7385	1,3-propanediol biosynthesis (engineered)
AFA_RS17075	PWY-1361	benzoyl-CoA degradation I (aerobic)
AFA_RS17075	PWY-5109	2-methylbutanoate biosynthesis
AFA_RS17075	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AFA_RS17075	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AFA_RS17075	PWY-5177	glutaryl-CoA degradation
AFA_RS17075	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AFA_RS17075	PWY-6435	4-hydroxybenzoate biosynthesis V
AFA_RS17075	PWY-6583	pyruvate fermentation to butanol I
AFA_RS17075	PWY-6863	pyruvate fermentation to hexanol
AFA_RS17075	PWY-6883	pyruvate fermentation to butanol II
AFA_RS17075	PWY-6944	androstenedione degradation
AFA_RS17075	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AFA_RS17075	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AFA_RS17075	PWY-7007	methyl ketone biosynthesis
AFA_RS17075	PWY-7046	4-coumarate degradation (anaerobic)
AFA_RS17075	PWY-7094	fatty acid salvage
AFA_RS17075	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AFA_RS17075	PWY-735	jasmonic acid biosynthesis
AFA_RS17075	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AFA_RS17075	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AFA_RS17075	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AFA_RS17075	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AFA_RS17075	PWY-7726	AFA_RS17075
AFA_RS17075	PWY-7778	AFA_RS17075
AFA_RS17075	PWY-7779	AFA_RS17075
AFA_RS17075	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AFA_RS17130	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AFA_RS17130	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AFA_RS17210	PWY-3781	aerobic respiration I (cytochrome c)
AFA_RS17210	PWY-6692	Fe(II) oxidation
AFA_RS17210	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
AFA_RS17210	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AFA_RS17270	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AFA_RS17315	PWY-5101	L-isoleucine biosynthesis II
AFA_RS17315	PWY-5103	L-isoleucine biosynthesis III
AFA_RS17315	PWY-5104	L-isoleucine biosynthesis IV
AFA_RS17315	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AFA_RS17350	PWY-6654	phosphopantothenate biosynthesis III
AFA_RS17410	PWY-5367	petroselinate biosynthesis
AFA_RS17410	PWY-5515	L-arabinose degradation II
AFA_RS17410	PWY-5525	D-glucuronate degradation I
AFA_RS17410	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AFA_RS17410	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AFA_RS17410	PWY-5989	stearate biosynthesis II (bacteria and plants)
AFA_RS17410	PWY-5994	palmitate biosynthesis I (animals and fungi)
AFA_RS17410	PWY-6113	superpathway of mycolate biosynthesis
AFA_RS17410	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AFA_RS17410	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AFA_RS17410	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AFA_RS17410	PWY-7663	gondoate biosynthesis (anaerobic)
AFA_RS17410	PWY-7664	oleate biosynthesis IV (anaerobic)
AFA_RS17410	PWY-7858	AFA_RS17410
AFA_RS17410	PWYG-321	mycolate biosynthesis
AFA_RS17485	PWY-6749	CMP-legionaminate biosynthesis I
AFA_RS17505	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AFA_RS17505	PWY-5667	CDP-diacylglycerol biosynthesis I
AFA_RS17505	PWY-6453	stigma estolide biosynthesis
AFA_RS17505	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AFA_RS17505	PWY-7587	oleate biosynthesis III (cyanobacteria)
AFA_RS17525	PWY-3781	aerobic respiration I (cytochrome c)
AFA_RS17525	PWY-4521	arsenite oxidation I (respiratory)
AFA_RS17525	PWY-6692	Fe(II) oxidation
AFA_RS17525	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AFA_RS17595	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AFA_RS17600	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AFA_RS17600	PWY-3162	L-tryptophan degradation V (side chain pathway)
AFA_RS17600	PWY-5057	L-valine degradation II
AFA_RS17600	PWY-5076	L-leucine degradation III
AFA_RS17600	PWY-5078	L-isoleucine degradation II
AFA_RS17600	PWY-5079	L-phenylalanine degradation III
AFA_RS17600	PWY-5082	L-methionine degradation III
AFA_RS17600	PWY-5480	pyruvate fermentation to ethanol I
AFA_RS17600	PWY-5486	pyruvate fermentation to ethanol II
AFA_RS17600	PWY-5751	phenylethanol biosynthesis
AFA_RS17600	PWY-6313	serotonin degradation
AFA_RS17600	PWY-6333	acetaldehyde biosynthesis I
AFA_RS17600	PWY-6342	noradrenaline and adrenaline degradation
AFA_RS17600	PWY-6454	vancomycin resistance I
AFA_RS17600	PWY-6587	pyruvate fermentation to ethanol III
AFA_RS17600	PWY-6802	salidroside biosynthesis
AFA_RS17600	PWY-6871	3-methylbutanol biosynthesis
AFA_RS17600	PWY-6901	superpathway of glucose and xylose degradation
AFA_RS17600	PWY-7013	L-1,2-propanediol degradation
AFA_RS17600	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AFA_RS17600	PWY-7118	chitin degradation to ethanol
AFA_RS17600	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AFA_RS17600	PWY-7798	AFA_RS17600
AFA_RS17650	PWY-5028	L-histidine degradation II
AFA_RS17650	PWY-5030	L-histidine degradation III
AFA_RS17670	PWY-5028	L-histidine degradation II
AFA_RS17670	PWY-5030	L-histidine degradation III
AFA_RS17675	PWY-5028	L-histidine degradation II
AFA_RS17675	PWY-5030	L-histidine degradation III
AFA_RS17745	PWY-5913	TCA cycle VI (obligate autotrophs)
AFA_RS17745	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AFA_RS17745	PWY-6638	sulfolactate degradation III
AFA_RS17745	PWY-6642	(<i>R</i>)-cysteate degradation
AFA_RS17745	PWY-6643	coenzyme M biosynthesis II
AFA_RS17745	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AFA_RS17745	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AFA_RS17745	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AFA_RS17820	PWY-4041	&gamma;-glutamyl cycle
AFA_RS17820	PWY-5826	hypoglycin biosynthesis
AFA_RS17885	PWY-6164	3-dehydroquinate biosynthesis I
AFA_RS17890	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AFA_RS17905	PWY-2941	L-lysine biosynthesis II
AFA_RS17905	PWY-2942	L-lysine biosynthesis III
AFA_RS17905	PWY-5097	L-lysine biosynthesis VI
AFA_RS17935	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AFA_RS17935	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AFA_RS18100	PWY-7782	AFA_RS18100
AFA_RS18100	PWY-7783	AFA_RS18100
AFA_RS18155	PWY-1361	benzoyl-CoA degradation I (aerobic)
AFA_RS18155	PWY-5109	2-methylbutanoate biosynthesis
AFA_RS18155	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AFA_RS18155	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AFA_RS18155	PWY-5177	glutaryl-CoA degradation
AFA_RS18155	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AFA_RS18155	PWY-6435	4-hydroxybenzoate biosynthesis V
AFA_RS18155	PWY-6583	pyruvate fermentation to butanol I
AFA_RS18155	PWY-6863	pyruvate fermentation to hexanol
AFA_RS18155	PWY-6883	pyruvate fermentation to butanol II
AFA_RS18155	PWY-6944	androstenedione degradation
AFA_RS18155	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AFA_RS18155	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AFA_RS18155	PWY-7007	methyl ketone biosynthesis
AFA_RS18155	PWY-7046	4-coumarate degradation (anaerobic)
AFA_RS18155	PWY-7094	fatty acid salvage
AFA_RS18155	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AFA_RS18155	PWY-735	jasmonic acid biosynthesis
AFA_RS18155	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AFA_RS18155	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AFA_RS18155	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AFA_RS18155	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AFA_RS18155	PWY-7726	AFA_RS18155
AFA_RS18155	PWY-7778	AFA_RS18155
AFA_RS18155	PWY-7779	AFA_RS18155
AFA_RS18155	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AFA_RS18180	PWY-6683	sulfate reduction III (assimilatory)
AFA_RS18185	PWY-6683	sulfate reduction III (assimilatory)
AFA_RS18190	PWY-5194	siroheme biosynthesis
AFA_RS18190	PWY-5196	factor 430 biosynthesis
AFA_RS18190	PWY-5441	S-methyl-L-methionine cycle
AFA_RS18190	PWY-702	L-methionine biosynthesis II
AFA_RS18190	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AFA_RS18440	PWY-5669	phosphatidylethanolamine biosynthesis I
AFA_RS18505	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
