ALFP_RS00055	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
ALFP_RS00105	PWY-723	alkylnitronates degradation
ALFP_RS00165	PWY-5103	L-isoleucine biosynthesis III
ALFP_RS00165	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ALFP_RS00300	PWY-5381	pyridine nucleotide cycling (plants)
ALFP_RS00300	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
ALFP_RS00300	PWY-6596	adenosine nucleotides degradation I
ALFP_RS00300	PWY-6606	guanosine nucleotides degradation II
ALFP_RS00300	PWY-6607	guanosine nucleotides degradation I
ALFP_RS00300	PWY-6608	guanosine nucleotides degradation III
ALFP_RS00300	PWY-7185	UTP and CTP dephosphorylation I
ALFP_RS00365	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
ALFP_RS00365	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
ALFP_RS00365	PWY-7717	ALFP_RS00365
ALFP_RS00365	PWY-7733	ALFP_RS00365
ALFP_RS00365	PWY-7734	ALFP_RS00365
ALFP_RS00475	PWY-5155	β-alanine biosynthesis III
ALFP_RS00565	PWY-5381	pyridine nucleotide cycling (plants)
ALFP_RS00580	PWY-6728	methylaspartate cycle
ALFP_RS00580	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ALFP_RS00580	PWY-7118	chitin degradation to ethanol
ALFP_RS00580	PWY-7294	xylose degradation IV
ALFP_RS00580	PWY-7295	L-arabinose degradation IV
ALFP_RS00585	PWY-6617	adenosine nucleotides degradation III
ALFP_RS00615	PWY-5101	L-isoleucine biosynthesis II
ALFP_RS00615	PWY-5103	L-isoleucine biosynthesis III
ALFP_RS00615	PWY-5104	L-isoleucine biosynthesis IV
ALFP_RS00615	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
ALFP_RS00615	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
ALFP_RS00615	PWY-6389	(<i>S</i>)-acetoin biosynthesis
ALFP_RS00615	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ALFP_RS00665	PWY-4381	fatty acid biosynthesis initiation I
ALFP_RS00665	PWY-5743	3-hydroxypropanoate cycle
ALFP_RS00665	PWY-5744	glyoxylate assimilation
ALFP_RS00665	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ALFP_RS00665	PWY-6679	jadomycin biosynthesis
ALFP_RS00665	PWY-6722	candicidin biosynthesis
ALFP_RS00665	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ALFP_RS00695	PWY-6936	seleno-amino acid biosynthesis
ALFP_RS00730	PWY-6871	3-methylbutanol biosynthesis
ALFP_RS00760	PWY-6871	3-methylbutanol biosynthesis
ALFP_RS00860	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
ALFP_RS01060	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ALFP_RS01120	PWY-5074	mevalonate degradation
ALFP_RS01145	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
ALFP_RS01185	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
ALFP_RS01195	PWY-3801	sucrose degradation II (sucrose synthase)
ALFP_RS01195	PWY-6527	stachyose degradation
ALFP_RS01195	PWY-7238	sucrose biosynthesis II
ALFP_RS01195	PWY-7343	UDP-glucose biosynthesis
ALFP_RS01200	PWY-3961	phosphopantothenate biosynthesis II
ALFP_RS01215	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ALFP_RS01215	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ALFP_RS01230	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
ALFP_RS01230	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
ALFP_RS01240	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
ALFP_RS01240	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
ALFP_RS01315	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
ALFP_RS01315	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ALFP_RS01315	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ALFP_RS01320	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
ALFP_RS01320	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ALFP_RS01320	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ALFP_RS01340	PWY-5958	acridone alkaloid biosynthesis
ALFP_RS01340	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
ALFP_RS01340	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
ALFP_RS01345	PWY-5958	acridone alkaloid biosynthesis
ALFP_RS01345	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
ALFP_RS01345	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
ALFP_RS01350	PWY-181	photorespiration
ALFP_RS01360	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ALFP_RS01360	PWY-5723	Rubisco shunt
ALFP_RS01400	PWY-5901	2,3-dihydroxybenzoate biosynthesis
ALFP_RS01405	PWY-5901	2,3-dihydroxybenzoate biosynthesis
ALFP_RS01410	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
ALFP_RS01410	PWY-5901	2,3-dihydroxybenzoate biosynthesis
ALFP_RS01410	PWY-6406	salicylate biosynthesis I
ALFP_RS01440	PWY-6012	acyl carrier protein metabolism I
ALFP_RS01440	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
ALFP_RS01495	PWY-1361	benzoyl-CoA degradation I (aerobic)
ALFP_RS01495	PWY-5109	2-methylbutanoate biosynthesis
ALFP_RS01495	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
ALFP_RS01495	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
ALFP_RS01495	PWY-5177	glutaryl-CoA degradation
ALFP_RS01495	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ALFP_RS01495	PWY-6435	4-hydroxybenzoate biosynthesis V
ALFP_RS01495	PWY-6583	pyruvate fermentation to butanol I
ALFP_RS01495	PWY-6863	pyruvate fermentation to hexanol
ALFP_RS01495	PWY-6883	pyruvate fermentation to butanol II
ALFP_RS01495	PWY-6944	androstenedione degradation
ALFP_RS01495	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
ALFP_RS01495	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
ALFP_RS01495	PWY-7007	methyl ketone biosynthesis
ALFP_RS01495	PWY-7046	4-coumarate degradation (anaerobic)
ALFP_RS01495	PWY-7094	fatty acid salvage
ALFP_RS01495	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
ALFP_RS01495	PWY-735	jasmonic acid biosynthesis
ALFP_RS01495	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
ALFP_RS01495	PWY-7606	docosahexaenoate biosynthesis III (mammals)
ALFP_RS01495	PWY-7726	ALFP_RS01495
ALFP_RS01500	PWY-5667	CDP-diacylglycerol biosynthesis I
ALFP_RS01500	PWY-5981	CDP-diacylglycerol biosynthesis III
ALFP_RS01580	PWY-4381	fatty acid biosynthesis initiation I
ALFP_RS01630	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ALFP_RS01630	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ALFP_RS01725	PWY-6967	methylamine degradation I
ALFP_RS01740	PWY-6967	methylamine degradation I
ALFP_RS01760	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
ALFP_RS01760	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
ALFP_RS01800	PWY-723	alkylnitronates degradation
ALFP_RS01810	PWY-1361	benzoyl-CoA degradation I (aerobic)
ALFP_RS01810	PWY-5109	2-methylbutanoate biosynthesis
ALFP_RS01810	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
ALFP_RS01810	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
ALFP_RS01810	PWY-5177	glutaryl-CoA degradation
ALFP_RS01810	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ALFP_RS01810	PWY-6435	4-hydroxybenzoate biosynthesis V
ALFP_RS01810	PWY-6583	pyruvate fermentation to butanol I
ALFP_RS01810	PWY-6863	pyruvate fermentation to hexanol
ALFP_RS01810	PWY-6883	pyruvate fermentation to butanol II
ALFP_RS01810	PWY-6944	androstenedione degradation
ALFP_RS01810	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
ALFP_RS01810	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
ALFP_RS01810	PWY-7007	methyl ketone biosynthesis
ALFP_RS01810	PWY-7046	4-coumarate degradation (anaerobic)
ALFP_RS01810	PWY-7094	fatty acid salvage
ALFP_RS01810	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
ALFP_RS01810	PWY-735	jasmonic acid biosynthesis
ALFP_RS01810	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
ALFP_RS01810	PWY-7606	docosahexaenoate biosynthesis III (mammals)
ALFP_RS01810	PWY-7726	ALFP_RS01810
ALFP_RS01840	PWY-6840	homoglutathione biosynthesis
ALFP_RS01840	PWY-7255	ergothioneine biosynthesis I (bacteria)
ALFP_RS01855	PWY-5344	L-homocysteine biosynthesis
ALFP_RS01895	PWY-5279	sulfite oxidation II
ALFP_RS01965	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
ALFP_RS01965	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
ALFP_RS01965	PWY-6268	adenosylcobalamin salvage from cobalamin
ALFP_RS01965	PWY-6269	adenosylcobalamin salvage from cobinamide II
ALFP_RS02030	PWY-2941	L-lysine biosynthesis II
ALFP_RS02030	PWY-5097	L-lysine biosynthesis VI
ALFP_RS02045	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
ALFP_RS02045	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
ALFP_RS02050	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
ALFP_RS02060	PWY-2201	folate transformations I
ALFP_RS02060	PWY-3841	folate transformations II
ALFP_RS02100	PWY-1622	formaldehyde assimilation I (serine pathway)
ALFP_RS02100	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
ALFP_RS02100	PWY-5913	TCA cycle VI (obligate autotrophs)
ALFP_RS02100	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ALFP_RS02100	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
ALFP_RS02100	PWY-6549	L-glutamine biosynthesis III
ALFP_RS02100	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ALFP_RS02100	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ALFP_RS02100	PWY-7124	ethylene biosynthesis V (engineered)
ALFP_RS02105	PWY-5101	L-isoleucine biosynthesis II
ALFP_RS02105	PWY-5103	L-isoleucine biosynthesis III
ALFP_RS02105	PWY-5104	L-isoleucine biosynthesis IV
ALFP_RS02105	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ALFP_RS02435	PWY-6454	vancomycin resistance I
ALFP_RS02435	PWY-6901	superpathway of glucose and xylose degradation
ALFP_RS02475	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
ALFP_RS02475	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
ALFP_RS02595	PWY-1042	glycolysis IV (plant cytosol)
ALFP_RS02595	PWY-1622	formaldehyde assimilation I (serine pathway)
ALFP_RS02595	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
ALFP_RS02595	PWY-5484	glycolysis II (from fructose 6-phosphate)
ALFP_RS02595	PWY-5723	Rubisco shunt
ALFP_RS02595	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ALFP_RS02595	PWY-6886	1-butanol autotrophic biosynthesis
ALFP_RS02595	PWY-6901	superpathway of glucose and xylose degradation
ALFP_RS02595	PWY-7003	glycerol degradation to butanol
ALFP_RS02595	PWY-7124	ethylene biosynthesis V (engineered)
ALFP_RS02595	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
ALFP_RS02620	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
ALFP_RS02805	PWY-5692	allantoin degradation to glyoxylate II
ALFP_RS02805	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
ALFP_RS02845	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
ALFP_RS02865	PWY-3841	folate transformations II
ALFP_RS02865	PWY-6614	tetrahydrofolate biosynthesis
ALFP_RS02870	PWY-3841	folate transformations II
ALFP_RS02870	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ALFP_RS02870	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
ALFP_RS02870	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ALFP_RS02870	PWY-7199	pyrimidine deoxyribonucleosides salvage
ALFP_RS02870	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ALFP_RS02880	PWY-3781	aerobic respiration I (cytochrome c)
ALFP_RS02880	PWY-4521	arsenite oxidation I (respiratory)
ALFP_RS02880	PWY-6692	Fe(II) oxidation
ALFP_RS02880	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ALFP_RS02910	PWY-1042	glycolysis IV (plant cytosol)
ALFP_RS02910	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
ALFP_RS02910	PWY-5484	glycolysis II (from fructose 6-phosphate)
ALFP_RS02910	PWY-5723	Rubisco shunt
ALFP_RS02910	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ALFP_RS02910	PWY-6886	1-butanol autotrophic biosynthesis
ALFP_RS02910	PWY-6901	superpathway of glucose and xylose degradation
ALFP_RS02910	PWY-7003	glycerol degradation to butanol
ALFP_RS02910	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
ALFP_RS02910	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ALFP_RS02965	PWY-5694	allantoin degradation to glyoxylate I
ALFP_RS02965	PWY-5705	allantoin degradation to glyoxylate III
ALFP_RS02970	PWY-5691	urate degradation to allantoin I
ALFP_RS02970	PWY-7394	urate degradation to allantoin II
ALFP_RS02980	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ALFP_RS02980	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ALFP_RS02980	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ALFP_RS03015	PWY-6749	CMP-legionaminate biosynthesis I
ALFP_RS03070	PWY-7560	methylerythritol phosphate pathway II
ALFP_RS03090	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
ALFP_RS03145	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
ALFP_RS03145	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ALFP_RS03145	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ALFP_RS03145	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ALFP_RS03155	PWY-5694	allantoin degradation to glyoxylate I
ALFP_RS03155	PWY-5705	allantoin degradation to glyoxylate III
ALFP_RS03320	PWY-1881	formate oxidation to CO<sub>2</sub>
ALFP_RS03320	PWY-5497	purine nucleobases degradation II (anaerobic)
ALFP_RS03320	PWY-6696	oxalate degradation III
ALFP_RS03340	PWY-6823	molybdenum cofactor biosynthesis
ALFP_RS03345	PWY-5964	guanylyl molybdenum cofactor biosynthesis
ALFP_RS03345	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
ALFP_RS03350	PWY-6823	molybdenum cofactor biosynthesis
ALFP_RS03360	PWY-6823	molybdenum cofactor biosynthesis
ALFP_RS03420	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
ALFP_RS03555	PWY-6700	queuosine biosynthesis
ALFP_RS03560	PWY-6700	queuosine biosynthesis
ALFP_RS03565	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ALFP_RS03565	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ALFP_RS03570	PWY-7183	pyrimidine nucleobases salvage I
ALFP_RS03625	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
ALFP_RS03645	PWY-5386	methylglyoxal degradation I
ALFP_RS03650	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
ALFP_RS03650	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
ALFP_RS03650	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
ALFP_RS03650	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
ALFP_RS03650	PWY-6978	plastoquinol-9 biosynthesis II
ALFP_RS03670	PWY-1281	sulfoacetaldehyde degradation I
ALFP_RS03670	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
ALFP_RS03670	PWY-5482	pyruvate fermentation to acetate II
ALFP_RS03670	PWY-5485	pyruvate fermentation to acetate IV
ALFP_RS03670	PWY-5497	purine nucleobases degradation II (anaerobic)
ALFP_RS03670	PWY-6637	sulfolactate degradation II
ALFP_RS03670	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ALFP_RS03685	PWY-2201	folate transformations I
ALFP_RS03690	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ALFP_RS03690	PWY-5723	Rubisco shunt
ALFP_RS03690	PWY-6891	thiazole biosynthesis II (Bacillus)
ALFP_RS03690	PWY-6892	thiazole biosynthesis I (E. coli)
ALFP_RS03690	PWY-6901	superpathway of glucose and xylose degradation
ALFP_RS03690	PWY-7560	methylerythritol phosphate pathway II
ALFP_RS03695	PWY-1042	glycolysis IV (plant cytosol)
ALFP_RS03695	PWY-5484	glycolysis II (from fructose 6-phosphate)
ALFP_RS03695	PWY-6901	superpathway of glucose and xylose degradation
ALFP_RS03695	PWY-7003	glycerol degradation to butanol
ALFP_RS03700	PWY-1042	glycolysis IV (plant cytosol)
ALFP_RS03700	PWY-5484	glycolysis II (from fructose 6-phosphate)
ALFP_RS03700	PWY-6886	1-butanol autotrophic biosynthesis
ALFP_RS03700	PWY-6901	superpathway of glucose and xylose degradation
ALFP_RS03700	PWY-7003	glycerol degradation to butanol
ALFP_RS03725	PWY-1042	glycolysis IV (plant cytosol)
ALFP_RS03725	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ALFP_RS03725	PWY-5484	glycolysis II (from fructose 6-phosphate)
ALFP_RS03725	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ALFP_RS03725	PWY-7385	1,3-propanediol biosynthesis (engineered)
ALFP_RS03730	PWY-6123	inosine-5'-phosphate biosynthesis I
ALFP_RS03730	PWY-6124	inosine-5'-phosphate biosynthesis II
ALFP_RS03730	PWY-7234	inosine-5'-phosphate biosynthesis III
ALFP_RS03735	PWY-6123	inosine-5'-phosphate biosynthesis I
ALFP_RS03735	PWY-7234	inosine-5'-phosphate biosynthesis III
ALFP_RS03770	PWY-4041	&gamma;-glutamyl cycle
ALFP_RS03770	PWY-5826	hypoglycin biosynthesis
ALFP_RS03775	PWY-2201	folate transformations I
ALFP_RS03775	PWY-5497	purine nucleobases degradation II (anaerobic)
ALFP_RS03790	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
ALFP_RS03790	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
ALFP_RS03810	PWY-5958	acridone alkaloid biosynthesis
ALFP_RS03810	PWY-6543	4-aminobenzoate biosynthesis
ALFP_RS03810	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
ALFP_RS03810	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
ALFP_RS03870	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ALFP_RS03900	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
ALFP_RS03900	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ALFP_RS03900	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ALFP_RS03900	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ALFP_RS03900	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ALFP_RS03900	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ALFP_RS03900	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
ALFP_RS03900	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
ALFP_RS03905	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
ALFP_RS03905	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ALFP_RS03905	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ALFP_RS03905	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ALFP_RS03905	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ALFP_RS03905	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ALFP_RS03905	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
ALFP_RS03905	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
ALFP_RS03930	PWY-2201	folate transformations I
ALFP_RS03945	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ALFP_RS03945	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ALFP_RS03950	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ALFP_RS03950	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ALFP_RS03950	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ALFP_RS03955	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ALFP_RS03955	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ALFP_RS03965	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ALFP_RS03965	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
ALFP_RS03965	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ALFP_RS03965	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ALFP_RS03970	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ALFP_RS03970	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ALFP_RS03975	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ALFP_RS03975	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ALFP_RS03995	PWY-2201	folate transformations I
ALFP_RS03995	PWY-5497	purine nucleobases degradation II (anaerobic)
ALFP_RS04040	PWY-2301	<i>myo</i>-inositol biosynthesis
ALFP_RS04040	PWY-4702	phytate degradation I
ALFP_RS04040	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
ALFP_RS04125	PWY-5386	methylglyoxal degradation I
ALFP_RS04160	PWY-5392	reductive TCA cycle II
ALFP_RS04160	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ALFP_RS04160	PWY-5690	TCA cycle II (plants and fungi)
ALFP_RS04160	PWY-5913	TCA cycle VI (obligate autotrophs)
ALFP_RS04160	PWY-6728	methylaspartate cycle
ALFP_RS04160	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ALFP_RS04160	PWY-7254	TCA cycle VII (acetate-producers)
ALFP_RS04160	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ALFP_RS04195	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ALFP_RS04195	PWY-6148	tetrahydromethanopterin biosynthesis
ALFP_RS04195	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
ALFP_RS04195	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
ALFP_RS04215	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ALFP_RS04215	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ALFP_RS04215	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ALFP_RS04225	PWY-2781	<i>cis</i>-zeatin biosynthesis
ALFP_RS04260	PWY-1281	sulfoacetaldehyde degradation I
ALFP_RS04260	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
ALFP_RS04260	PWY-5482	pyruvate fermentation to acetate II
ALFP_RS04260	PWY-5485	pyruvate fermentation to acetate IV
ALFP_RS04260	PWY-5497	purine nucleobases degradation II (anaerobic)
ALFP_RS04260	PWY-6637	sulfolactate degradation II
ALFP_RS04260	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ALFP_RS04275	PWY-2941	L-lysine biosynthesis II
ALFP_RS04275	PWY-2942	L-lysine biosynthesis III
ALFP_RS04275	PWY-5097	L-lysine biosynthesis VI
ALFP_RS04435	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ALFP_RS04435	PWY-5723	Rubisco shunt
ALFP_RS04440	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ALFP_RS04440	PWY-5686	UMP biosynthesis
ALFP_RS04440	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ALFP_RS04445	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ALFP_RS04445	PWY-5686	UMP biosynthesis
ALFP_RS04445	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ALFP_RS04490	PWY-6614	tetrahydrofolate biosynthesis
ALFP_RS04495	PWY-6749	CMP-legionaminate biosynthesis I
ALFP_RS04625	PWY-6803	phosphatidylcholine acyl editing
ALFP_RS04625	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
ALFP_RS04625	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
ALFP_RS04625	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
ALFP_RS04675	PWY-2941	L-lysine biosynthesis II
ALFP_RS04675	PWY-2942	L-lysine biosynthesis III
ALFP_RS04675	PWY-5097	L-lysine biosynthesis VI
ALFP_RS04695	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
ALFP_RS04760	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ALFP_RS04760	PWY-6855	chitin degradation I (archaea)
ALFP_RS04760	PWY-6906	chitin derivatives degradation
ALFP_RS04770	PWY-4041	&gamma;-glutamyl cycle
ALFP_RS04770	PWY-5826	hypoglycin biosynthesis
ALFP_RS04810	PWY-5796	malonate decarboxylase activation
ALFP_RS04815	PWY-5796	malonate decarboxylase activation
ALFP_RS04820	PWY-4381	fatty acid biosynthesis initiation I
ALFP_RS04820	PWY-5743	3-hydroxypropanoate cycle
ALFP_RS04820	PWY-5744	glyoxylate assimilation
ALFP_RS04820	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ALFP_RS04820	PWY-6060	malonate degradation II (biotin-dependent)
ALFP_RS04820	PWY-6679	jadomycin biosynthesis
ALFP_RS04820	PWY-6722	candicidin biosynthesis
ALFP_RS04820	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ALFP_RS04825	PWY-4381	fatty acid biosynthesis initiation I
ALFP_RS04825	PWY-5743	3-hydroxypropanoate cycle
ALFP_RS04825	PWY-5744	glyoxylate assimilation
ALFP_RS04825	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ALFP_RS04825	PWY-6060	malonate degradation II (biotin-dependent)
ALFP_RS04825	PWY-6679	jadomycin biosynthesis
ALFP_RS04825	PWY-6722	candicidin biosynthesis
ALFP_RS04825	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ALFP_RS04835	PWY-5794	malonate degradation I (biotin-independent)
ALFP_RS04835	PWY-6060	malonate degradation II (biotin-dependent)
ALFP_RS04840	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
ALFP_RS04850	PWY-6004	glycine betaine biosynthesis V (from glycine)
ALFP_RS04855	PWY-2301	<i>myo</i>-inositol biosynthesis
ALFP_RS04855	PWY-4702	phytate degradation I
ALFP_RS04855	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
ALFP_RS04865	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
ALFP_RS04900	PWY-4381	fatty acid biosynthesis initiation I
ALFP_RS04900	PWY-5743	3-hydroxypropanoate cycle
ALFP_RS04900	PWY-5744	glyoxylate assimilation
ALFP_RS04900	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ALFP_RS04900	PWY-6679	jadomycin biosynthesis
ALFP_RS04900	PWY-6722	candicidin biosynthesis
ALFP_RS04900	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ALFP_RS04910	PWY-2941	L-lysine biosynthesis II
ALFP_RS04910	PWY-2942	L-lysine biosynthesis III
ALFP_RS04910	PWY-5097	L-lysine biosynthesis VI
ALFP_RS04910	PWY-6559	spermidine biosynthesis II
ALFP_RS04910	PWY-6562	norspermidine biosynthesis
ALFP_RS04910	PWY-7153	grixazone biosynthesis
ALFP_RS05015	PWY-4061	glutathione-mediated detoxification I
ALFP_RS05015	PWY-6842	glutathione-mediated detoxification II
ALFP_RS05015	PWY-7112	4-hydroxy-2-nonenal detoxification
ALFP_RS05015	PWY-7533	gliotoxin biosynthesis
ALFP_RS05020	PWY-7731	ALFP_RS05020
ALFP_RS05040	PWY-6610	adenine and adenosine salvage IV
ALFP_RS05135	PWY-5747	2-methylcitrate cycle II
ALFP_RS05155	PWY-5747	2-methylcitrate cycle II
ALFP_RS05175	PWY-1622	formaldehyde assimilation I (serine pathway)
ALFP_RS05175	PWY-5392	reductive TCA cycle II
ALFP_RS05175	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ALFP_RS05175	PWY-5690	TCA cycle II (plants and fungi)
ALFP_RS05175	PWY-5913	TCA cycle VI (obligate autotrophs)
ALFP_RS05175	PWY-6728	methylaspartate cycle
ALFP_RS05175	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ALFP_RS05175	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ALFP_RS05175	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ALFP_RS05195	PWY-3781	aerobic respiration I (cytochrome c)
ALFP_RS05195	PWY-4302	aerobic respiration III (alternative oxidase pathway)
ALFP_RS05195	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ALFP_RS05195	PWY-5690	TCA cycle II (plants and fungi)
ALFP_RS05195	PWY-6728	methylaspartate cycle
ALFP_RS05195	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ALFP_RS05195	PWY-7254	TCA cycle VII (acetate-producers)
ALFP_RS05195	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ALFP_RS05200	PWY-3781	aerobic respiration I (cytochrome c)
ALFP_RS05200	PWY-4302	aerobic respiration III (alternative oxidase pathway)
ALFP_RS05200	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ALFP_RS05200	PWY-5690	TCA cycle II (plants and fungi)
ALFP_RS05200	PWY-6728	methylaspartate cycle
ALFP_RS05200	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ALFP_RS05200	PWY-7254	TCA cycle VII (acetate-producers)
ALFP_RS05200	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ALFP_RS05225	PWY-1281	sulfoacetaldehyde degradation I
ALFP_RS05225	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
ALFP_RS05225	PWY-5482	pyruvate fermentation to acetate II
ALFP_RS05225	PWY-5485	pyruvate fermentation to acetate IV
ALFP_RS05225	PWY-5497	purine nucleobases degradation II (anaerobic)
ALFP_RS05225	PWY-6637	sulfolactate degradation II
ALFP_RS05225	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ALFP_RS05235	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
ALFP_RS05240	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
ALFP_RS05245	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
ALFP_RS05245	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
ALFP_RS05345	PWY-5676	acetyl-CoA fermentation to butanoate II
ALFP_RS05345	PWY-5741	ethylmalonyl-CoA pathway
ALFP_RS05345	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
ALFP_RS05465	PWY-6891	thiazole biosynthesis II (Bacillus)
ALFP_RS05465	PWY-6892	thiazole biosynthesis I (E. coli)
ALFP_RS05465	PWY-7560	methylerythritol phosphate pathway II
ALFP_RS05490	PWY-5350	thiosulfate disproportionation III (rhodanese)
ALFP_RS05505	PWY-6891	thiazole biosynthesis II (Bacillus)
ALFP_RS05505	PWY-6892	thiazole biosynthesis I (E. coli)
ALFP_RS05505	PWY-7560	methylerythritol phosphate pathway II
ALFP_RS05510	PWY-5663	tetrahydrobiopterin biosynthesis I
ALFP_RS05510	PWY-5664	tetrahydrobiopterin biosynthesis II
ALFP_RS05510	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ALFP_RS05510	PWY-6703	preQ<sub>0</sub> biosynthesis
ALFP_RS05510	PWY-6983	tetrahydrobiopterin biosynthesis III
ALFP_RS05510	PWY-7442	drosopterin and aurodrosopterin biosynthesis
ALFP_RS05545	PWY-7294	xylose degradation IV
ALFP_RS05545	PWY-7295	L-arabinose degradation IV
ALFP_RS05600	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ALFP_RS05620	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
ALFP_RS05620	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
ALFP_RS05650	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ALFP_RS05650	PWY-5723	Rubisco shunt
ALFP_RS05675	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ALFP_RS05935	PWY-4261	glycerol degradation I
ALFP_RS05940	PWY-4261	glycerol degradation I
ALFP_RS05940	PWY-6118	glycerol-3-phosphate shuttle
ALFP_RS05940	PWY-6952	glycerophosphodiester degradation
ALFP_RS06170	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ALFP_RS06320	PWY-5316	nicotine biosynthesis
ALFP_RS06320	PWY-5381	pyridine nucleotide cycling (plants)
ALFP_RS06320	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
ALFP_RS06320	PWY-7342	superpathway of nicotine biosynthesis
ALFP_RS06425	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
ALFP_RS06530	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
ALFP_RS06570	PWY-3781	aerobic respiration I (cytochrome c)
ALFP_RS06570	PWY-4521	arsenite oxidation I (respiratory)
ALFP_RS06570	PWY-6692	Fe(II) oxidation
ALFP_RS06570	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ALFP_RS06620	PWY-6832	2-aminoethylphosphonate degradation II
ALFP_RS06930	PWY-6936	seleno-amino acid biosynthesis
ALFP_RS06955	PWY-4983	L-citrulline-nitric oxide cycle
ALFP_RS06955	PWY-4984	urea cycle
ALFP_RS06955	PWY-5	canavanine biosynthesis
ALFP_RS06955	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ALFP_RS06955	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ALFP_RS07020	PWY-4981	L-proline biosynthesis II (from arginine)
ALFP_RS07020	PWY-4984	urea cycle
ALFP_RS07020	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ALFP_RS07050	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ALFP_RS07055	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
ALFP_RS07085	PWY-6854	ethylene biosynthesis III (microbes)
ALFP_RS07095	PWY-1361	benzoyl-CoA degradation I (aerobic)
ALFP_RS07095	PWY-2361	3-oxoadipate degradation
ALFP_RS07095	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
ALFP_RS07135	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
ALFP_RS07135	PWY-6853	ethylene biosynthesis II (microbes)
ALFP_RS07135	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
ALFP_RS07190	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
ALFP_RS07190	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ALFP_RS07190	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
ALFP_RS07190	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
ALFP_RS07210	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
ALFP_RS07210	PWY-6167	flavin biosynthesis II (archaea)
ALFP_RS07210	PWY-6168	flavin biosynthesis III (fungi)
ALFP_RS07215	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ALFP_RS07215	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
ALFP_RS07220	PWY-6825	phosphatidylcholine biosynthesis V
ALFP_RS07420	PWY-5913	TCA cycle VI (obligate autotrophs)
ALFP_RS07420	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
ALFP_RS07420	PWY-6638	sulfolactate degradation III
ALFP_RS07420	PWY-6642	(<i>R</i>)-cysteate degradation
ALFP_RS07420	PWY-6643	coenzyme M biosynthesis II
ALFP_RS07420	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ALFP_RS07420	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ALFP_RS07420	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ALFP_RS07440	PWY-6823	molybdenum cofactor biosynthesis
ALFP_RS07440	PWY-6891	thiazole biosynthesis II (Bacillus)
ALFP_RS07440	PWY-6892	thiazole biosynthesis I (E. coli)
ALFP_RS07440	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
ALFP_RS07555	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ALFP_RS07555	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ALFP_RS07555	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ALFP_RS07560	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
ALFP_RS07560	PWY-6596	adenosine nucleotides degradation I
ALFP_RS07560	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
ALFP_RS07580	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
ALFP_RS07635	PWY-7425	2-chloroacrylate degradation I
ALFP_RS07660	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
ALFP_RS07660	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
ALFP_RS07660	PWY-6936	seleno-amino acid biosynthesis
ALFP_RS07660	PWY-702	L-methionine biosynthesis II
ALFP_RS07670	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
ALFP_RS07670	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
ALFP_RS07670	PWY-6936	seleno-amino acid biosynthesis
ALFP_RS07670	PWY-702	L-methionine biosynthesis II
ALFP_RS07700	PWY-5663	tetrahydrobiopterin biosynthesis I
ALFP_RS07700	PWY-5664	tetrahydrobiopterin biosynthesis II
ALFP_RS07700	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ALFP_RS07700	PWY-6703	preQ<sub>0</sub> biosynthesis
ALFP_RS07700	PWY-6983	tetrahydrobiopterin biosynthesis III
ALFP_RS07700	PWY-7442	drosopterin and aurodrosopterin biosynthesis
ALFP_RS07715	PWY-5686	UMP biosynthesis
ALFP_RS07750	PWY-6910	hydroxymethylpyrimidine salvage
ALFP_RS07750	PWY-7356	thiamin salvage IV (yeast)
ALFP_RS07750	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
ALFP_RS07795	PWY-5642	2,4-dinitrotoluene degradation
ALFP_RS07795	PWY-6373	acrylate degradation
ALFP_RS07815	PWY-723	alkylnitronates degradation
ALFP_RS07850	PWY-5386	methylglyoxal degradation I
ALFP_RS08000	PWY-6871	3-methylbutanol biosynthesis
ALFP_RS08020	PWY-1042	glycolysis IV (plant cytosol)
ALFP_RS08020	PWY-1622	formaldehyde assimilation I (serine pathway)
ALFP_RS08020	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
ALFP_RS08020	PWY-5484	glycolysis II (from fructose 6-phosphate)
ALFP_RS08020	PWY-5723	Rubisco shunt
ALFP_RS08020	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ALFP_RS08020	PWY-6886	1-butanol autotrophic biosynthesis
ALFP_RS08020	PWY-6901	superpathway of glucose and xylose degradation
ALFP_RS08020	PWY-7003	glycerol degradation to butanol
ALFP_RS08020	PWY-7124	ethylene biosynthesis V (engineered)
ALFP_RS08020	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
ALFP_RS08040	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
ALFP_RS08045	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
ALFP_RS08085	PWY-6854	ethylene biosynthesis III (microbes)
ALFP_RS08130	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ALFP_RS08165	PWY-5316	nicotine biosynthesis
ALFP_RS08165	PWY-7342	superpathway of nicotine biosynthesis
ALFP_RS08170	PWY-5316	nicotine biosynthesis
ALFP_RS08170	PWY-7342	superpathway of nicotine biosynthesis
ALFP_RS08245	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
ALFP_RS08300	PWY-5418	phenol degradation I (aerobic)
ALFP_RS08320	PWY-5418	phenol degradation I (aerobic)
ALFP_RS08570	PWY-6823	molybdenum cofactor biosynthesis
ALFP_RS08570	PWY-6891	thiazole biosynthesis II (Bacillus)
ALFP_RS08570	PWY-6892	thiazole biosynthesis I (E. coli)
ALFP_RS08570	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
ALFP_RS08645	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ALFP_RS08645	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ALFP_RS09210	PWY-6167	flavin biosynthesis II (archaea)
ALFP_RS09210	PWY-6168	flavin biosynthesis III (fungi)
ALFP_RS09210	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ALFP_RS09310	PWY-5381	pyridine nucleotide cycling (plants)
ALFP_RS09335	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
ALFP_RS09345	PWY-381	nitrate reduction II (assimilatory)
ALFP_RS09345	PWY-5675	nitrate reduction V (assimilatory)
ALFP_RS09345	PWY-6549	L-glutamine biosynthesis III
ALFP_RS09345	PWY-6963	ammonia assimilation cycle I
ALFP_RS09345	PWY-6964	ammonia assimilation cycle II
ALFP_RS09440	PWY-3341	L-proline biosynthesis III
ALFP_RS09440	PWY-4981	L-proline biosynthesis II (from arginine)
ALFP_RS09440	PWY-6344	L-ornithine degradation II (Stickland reaction)
ALFP_RS09495	PWY-5392	reductive TCA cycle II
ALFP_RS09495	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ALFP_RS09495	PWY-5690	TCA cycle II (plants and fungi)
ALFP_RS09495	PWY-5913	TCA cycle VI (obligate autotrophs)
ALFP_RS09495	PWY-6728	methylaspartate cycle
ALFP_RS09495	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ALFP_RS09495	PWY-7254	TCA cycle VII (acetate-producers)
ALFP_RS09495	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ALFP_RS09660	PWY-4202	arsenate detoxification I (glutaredoxin)
ALFP_RS09660	PWY-4621	arsenate detoxification II (glutaredoxin)
ALFP_RS09750	PWY-5484	glycolysis II (from fructose 6-phosphate)
ALFP_RS09760	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
ALFP_RS09775	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
ALFP_RS09775	PWY-622	starch biosynthesis
ALFP_RS09785	PWY-5971	palmitate biosynthesis II (bacteria and plants)
ALFP_RS09785	PWY-5973	<i>cis</i>-vaccenate biosynthesis
ALFP_RS09785	PWY-5989	stearate biosynthesis II (bacteria and plants)
ALFP_RS09785	PWY-5994	palmitate biosynthesis I (animals and fungi)
ALFP_RS09785	PWY-6113	superpathway of mycolate biosynthesis
ALFP_RS09785	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
ALFP_RS09785	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ALFP_RS09785	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ALFP_RS09785	PWY-7663	gondoate biosynthesis (anaerobic)
ALFP_RS09785	PWY-7664	oleate biosynthesis IV (anaerobic)
ALFP_RS09785	PWYG-321	mycolate biosynthesis
ALFP_RS09810	PWY-7294	xylose degradation IV
ALFP_RS09810	PWY-7295	L-arabinose degradation IV
ALFP_RS09810	PWY-7560	methylerythritol phosphate pathway II
ALFP_RS09815	PWY-5667	CDP-diacylglycerol biosynthesis I
ALFP_RS09815	PWY-5981	CDP-diacylglycerol biosynthesis III
ALFP_RS09870	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ALFP_RS09870	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ALFP_RS09870	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ALFP_RS09870	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
ALFP_RS09885	PWY-2161	folate polyglutamylation
ALFP_RS09890	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
ALFP_RS09890	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
ALFP_RS09900	PWY-6891	thiazole biosynthesis II (Bacillus)
ALFP_RS09900	PWY-6892	thiazole biosynthesis I (E. coli)
ALFP_RS09900	PWY-7560	methylerythritol phosphate pathway II
ALFP_RS09915	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
ALFP_RS09915	PWY-2201	folate transformations I
ALFP_RS09915	PWY-3841	folate transformations II
ALFP_RS09915	PWY-5030	L-histidine degradation III
ALFP_RS09915	PWY-5497	purine nucleobases degradation II (anaerobic)
ALFP_RS09915	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
ALFP_RS10040	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
ALFP_RS10090	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
ALFP_RS10090	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
ALFP_RS10090	PWY-6148	tetrahydromethanopterin biosynthesis
ALFP_RS10115	PWY-4983	L-citrulline-nitric oxide cycle
ALFP_RS10115	PWY-4984	urea cycle
ALFP_RS10115	PWY-5	canavanine biosynthesis
ALFP_RS10115	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ALFP_RS10115	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ALFP_RS10155	PWY-5381	pyridine nucleotide cycling (plants)
ALFP_RS10155	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
ALFP_RS10155	PWY-6596	adenosine nucleotides degradation I
ALFP_RS10155	PWY-6606	guanosine nucleotides degradation II
ALFP_RS10155	PWY-6607	guanosine nucleotides degradation I
ALFP_RS10155	PWY-6608	guanosine nucleotides degradation III
ALFP_RS10155	PWY-7185	UTP and CTP dephosphorylation I
ALFP_RS10165	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
ALFP_RS10165	PWY-5368	dimorphecolate biosynthesis
ALFP_RS10165	PWY-5995	linoleate biosynthesis I (plants)
ALFP_RS10165	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
ALFP_RS10165	PWY-6803	phosphatidylcholine acyl editing
ALFP_RS10165	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
ALFP_RS10165	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
ALFP_RS10165	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
ALFP_RS10165	PWY-7470	phosphatidylcholine biosynthesis VII
ALFP_RS10165	PWY-7618	ricinoleate biosynthesis
ALFP_RS10285	PWY-2941	L-lysine biosynthesis II
ALFP_RS10285	PWY-2942	L-lysine biosynthesis III
ALFP_RS10285	PWY-5097	L-lysine biosynthesis VI
ALFP_RS10285	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ALFP_RS10285	PWY-6559	spermidine biosynthesis II
ALFP_RS10285	PWY-6562	norspermidine biosynthesis
ALFP_RS10285	PWY-7153	grixazone biosynthesis
ALFP_RS10285	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ALFP_RS10290	PWY-7396	butanol and isobutanol biosynthesis (engineered)
ALFP_RS10335	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ALFP_RS10365	PWY-702	L-methionine biosynthesis II
ALFP_RS10445	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ALFP_RS10445	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
ALFP_RS10450	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ALFP_RS10450	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
ALFP_RS10460	PWY-5392	reductive TCA cycle II
ALFP_RS10460	PWY-5537	pyruvate fermentation to acetate V
ALFP_RS10460	PWY-5538	pyruvate fermentation to acetate VI
ALFP_RS10460	PWY-5690	TCA cycle II (plants and fungi)
ALFP_RS10460	PWY-5913	TCA cycle VI (obligate autotrophs)
ALFP_RS10460	PWY-6728	methylaspartate cycle
ALFP_RS10460	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ALFP_RS10460	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ALFP_RS10465	PWY-5392	reductive TCA cycle II
ALFP_RS10465	PWY-5537	pyruvate fermentation to acetate V
ALFP_RS10465	PWY-5538	pyruvate fermentation to acetate VI
ALFP_RS10465	PWY-5690	TCA cycle II (plants and fungi)
ALFP_RS10465	PWY-5913	TCA cycle VI (obligate autotrophs)
ALFP_RS10465	PWY-6728	methylaspartate cycle
ALFP_RS10465	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ALFP_RS10465	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ALFP_RS10475	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
ALFP_RS10475	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
ALFP_RS10475	PWY-6936	seleno-amino acid biosynthesis
ALFP_RS10475	PWY-702	L-methionine biosynthesis II
ALFP_RS10540	PWY-5642	2,4-dinitrotoluene degradation
ALFP_RS10540	PWY-6373	acrylate degradation
ALFP_RS10545	PWY-5686	UMP biosynthesis
ALFP_RS10575	PWY-723	alkylnitronates degradation
ALFP_RS10720	PWY-5194	siroheme biosynthesis
ALFP_RS10720	PWY-5441	S-methyl-L-methionine cycle
ALFP_RS10720	PWY-702	L-methionine biosynthesis II
ALFP_RS10720	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
ALFP_RS10760	PWY-5194	siroheme biosynthesis
ALFP_RS10760	PWY-5441	S-methyl-L-methionine cycle
ALFP_RS10760	PWY-702	L-methionine biosynthesis II
ALFP_RS10760	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
ALFP_RS10835	PWY-5532	adenosine nucleotides degradation IV
ALFP_RS10835	PWY-5723	Rubisco shunt
ALFP_RS10990	PWY-5497	purine nucleobases degradation II (anaerobic)
ALFP_RS10990	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
ALFP_RS10990	PWY-6538	caffeine degradation III (bacteria, via demethylation)
ALFP_RS10990	PWY-6596	adenosine nucleotides degradation I
ALFP_RS10990	PWY-6606	guanosine nucleotides degradation II
ALFP_RS10990	PWY-6607	guanosine nucleotides degradation I
ALFP_RS10990	PWY-6608	guanosine nucleotides degradation III
ALFP_RS10990	PWY-6999	theophylline degradation
ALFP_RS10995	PWY-5497	purine nucleobases degradation II (anaerobic)
ALFP_RS10995	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
ALFP_RS10995	PWY-6538	caffeine degradation III (bacteria, via demethylation)
ALFP_RS10995	PWY-6596	adenosine nucleotides degradation I
ALFP_RS10995	PWY-6606	guanosine nucleotides degradation II
ALFP_RS10995	PWY-6607	guanosine nucleotides degradation I
ALFP_RS10995	PWY-6608	guanosine nucleotides degradation III
ALFP_RS10995	PWY-6999	theophylline degradation
ALFP_RS11005	PWY-5497	purine nucleobases degradation II (anaerobic)
ALFP_RS11005	PWY-6606	guanosine nucleotides degradation II
ALFP_RS11005	PWY-6608	guanosine nucleotides degradation III
ALFP_RS11005	PWY-7442	drosopterin and aurodrosopterin biosynthesis
ALFP_RS11010	PWY-6825	phosphatidylcholine biosynthesis V
ALFP_RS11045	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ALFP_RS11110	PWY-2201	folate transformations I
ALFP_RS11115	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
ALFP_RS11115	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
ALFP_RS11115	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ALFP_RS11115	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
ALFP_RS11115	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
ALFP_RS11115	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ALFP_RS11115	PWY-7205	CMP phosphorylation
ALFP_RS11115	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ALFP_RS11115	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ALFP_RS11115	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
ALFP_RS11115	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ALFP_RS11115	PWY-7224	purine deoxyribonucleosides salvage
ALFP_RS11115	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
ALFP_RS11115	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
ALFP_RS11125	PWY-6829	tRNA methylation (yeast)
ALFP_RS11125	PWY-7285	methylwyosine biosynthesis
ALFP_RS11125	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
ALFP_RS11160	PWY-5691	urate degradation to allantoin I
ALFP_RS11160	PWY-7394	urate degradation to allantoin II
ALFP_RS11220	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ALFP_RS11335	PWY-3781	aerobic respiration I (cytochrome c)
ALFP_RS11335	PWY-4521	arsenite oxidation I (respiratory)
ALFP_RS11335	PWY-6692	Fe(II) oxidation
ALFP_RS11335	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ALFP_RS11350	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ALFP_RS11355	PWY-6700	queuosine biosynthesis
ALFP_RS11365	PWY-5269	cardiolipin biosynthesis II
ALFP_RS11365	PWY-5668	cardiolipin biosynthesis I
ALFP_RS11375	PWY-6902	chitin degradation II
ALFP_RS11380	PWY-6012	acyl carrier protein metabolism I
ALFP_RS11380	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
ALFP_RS11385	PWY-1341	phenylacetate degradation II (anaerobic)
ALFP_RS11385	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
ALFP_RS11385	PWY-7716	ALFP_RS11385
ALFP_RS11425	PWY-5176	coumarin biosynthesis (via 2-coumarate)
ALFP_RS11500	PWY-6936	seleno-amino acid biosynthesis
ALFP_RS11540	PWY-7205	CMP phosphorylation
ALFP_RS11545	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ALFP_RS11550	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
ALFP_RS11555	PWY-3461	L-tyrosine biosynthesis II
ALFP_RS11555	PWY-3462	L-phenylalanine biosynthesis II
ALFP_RS11555	PWY-6120	L-tyrosine biosynthesis III
ALFP_RS11555	PWY-6627	salinosporamide A biosynthesis
ALFP_RS11555	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
ALFP_RS11555	PWY-7626	bacilysin biosynthesis
ALFP_RS11575	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
ALFP_RS11575	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
ALFP_RS11575	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
ALFP_RS11575	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
ALFP_RS11575	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
ALFP_RS11575	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
ALFP_RS11575	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
ALFP_RS11575	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
ALFP_RS11575	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
ALFP_RS11575	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
ALFP_RS11580	PWY-181	photorespiration
ALFP_RS11830	PWY-5278	sulfite oxidation III
ALFP_RS11830	PWY-5340	sulfate activation for sulfonation
ALFP_RS11830	PWY-6683	sulfate reduction III (assimilatory)
ALFP_RS11830	PWY-6932	selenate reduction
ALFP_RS11835	PWY-6834	spermidine biosynthesis III
ALFP_RS11875	PWY-6168	flavin biosynthesis III (fungi)
ALFP_RS11875	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
ALFP_RS11940	PWY-6123	inosine-5'-phosphate biosynthesis I
ALFP_RS11940	PWY-6124	inosine-5'-phosphate biosynthesis II
ALFP_RS11940	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ALFP_RS11940	PWY-7234	inosine-5'-phosphate biosynthesis III
ALFP_RS11975	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
ALFP_RS11975	PWY-6164	3-dehydroquinate biosynthesis I
ALFP_RS11975	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
ALFP_RS12075	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ALFP_RS12075	PWY-6416	quinate degradation II
ALFP_RS12075	PWY-6707	gallate biosynthesis
ALFP_RS12080	PWY-6409	pyoverdine I biosynthesis
ALFP_RS12080	PWY-6562	norspermidine biosynthesis
ALFP_RS12080	PWY-761	rhizobactin 1021 biosynthesis
ALFP_RS12120	PWY-5484	glycolysis II (from fructose 6-phosphate)
ALFP_RS12155	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ALFP_RS12155	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ALFP_RS12155	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ALFP_RS12160	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
ALFP_RS12160	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
ALFP_RS12165	PWY-5381	pyridine nucleotide cycling (plants)
ALFP_RS12165	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
ALFP_RS12175	PWY-6825	phosphatidylcholine biosynthesis V
ALFP_RS12325	PWY-3341	L-proline biosynthesis III
ALFP_RS12325	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
ALFP_RS12335	PWY-6825	phosphatidylcholine biosynthesis V
ALFP_RS12360	PWY-1042	glycolysis IV (plant cytosol)
ALFP_RS12360	PWY-1622	formaldehyde assimilation I (serine pathway)
ALFP_RS12360	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
ALFP_RS12360	PWY-5484	glycolysis II (from fructose 6-phosphate)
ALFP_RS12360	PWY-5723	Rubisco shunt
ALFP_RS12360	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ALFP_RS12360	PWY-6886	1-butanol autotrophic biosynthesis
ALFP_RS12360	PWY-6901	superpathway of glucose and xylose degradation
ALFP_RS12360	PWY-7003	glycerol degradation to butanol
ALFP_RS12360	PWY-7124	ethylene biosynthesis V (engineered)
ALFP_RS12360	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
ALFP_RS12385	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
ALFP_RS12385	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
ALFP_RS12395	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
ALFP_RS12395	PWY-7177	UTP and CTP dephosphorylation II
ALFP_RS12395	PWY-7185	UTP and CTP dephosphorylation I
ALFP_RS12430	PWY-6672	<i>cis</i>-genanyl-CoA degradation
ALFP_RS12430	PWY-7118	chitin degradation to ethanol
ALFP_RS12455	PWY-5642	2,4-dinitrotoluene degradation
ALFP_RS12455	PWY-6373	acrylate degradation
ALFP_RS12560	PWY-5367	petroselinate biosynthesis
ALFP_RS12560	PWY-5515	L-arabinose degradation II
ALFP_RS12560	PWY-5525	D-glucuronate degradation I
ALFP_RS12560	PWY-5971	palmitate biosynthesis II (bacteria and plants)
ALFP_RS12560	PWY-5973	<i>cis</i>-vaccenate biosynthesis
ALFP_RS12560	PWY-5989	stearate biosynthesis II (bacteria and plants)
ALFP_RS12560	PWY-5994	palmitate biosynthesis I (animals and fungi)
ALFP_RS12560	PWY-6113	superpathway of mycolate biosynthesis
ALFP_RS12560	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
ALFP_RS12560	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ALFP_RS12560	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ALFP_RS12560	PWY-7663	gondoate biosynthesis (anaerobic)
ALFP_RS12560	PWY-7664	oleate biosynthesis IV (anaerobic)
ALFP_RS12560	PWYG-321	mycolate biosynthesis
ALFP_RS12565	PWY-4381	fatty acid biosynthesis initiation I
ALFP_RS12565	PWY-6799	fatty acid biosynthesis (plant mitochondria)
ALFP_RS12565	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ALFP_RS12570	PWY-4381	fatty acid biosynthesis initiation I
ALFP_RS12595	PWY-2201	folate transformations I
ALFP_RS12630	PWY-4381	fatty acid biosynthesis initiation I
ALFP_RS12630	PWY-5743	3-hydroxypropanoate cycle
ALFP_RS12630	PWY-5744	glyoxylate assimilation
ALFP_RS12630	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ALFP_RS12630	PWY-6679	jadomycin biosynthesis
ALFP_RS12630	PWY-6722	candicidin biosynthesis
ALFP_RS12630	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ALFP_RS12655	PWY-5381	pyridine nucleotide cycling (plants)
ALFP_RS12755	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
ALFP_RS12755	PWY-5368	dimorphecolate biosynthesis
ALFP_RS12755	PWY-5995	linoleate biosynthesis I (plants)
ALFP_RS12755	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
ALFP_RS12755	PWY-6803	phosphatidylcholine acyl editing
ALFP_RS12755	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
ALFP_RS12755	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
ALFP_RS12755	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
ALFP_RS12755	PWY-7470	phosphatidylcholine biosynthesis VII
ALFP_RS12755	PWY-7618	ricinoleate biosynthesis
ALFP_RS12770	PWY-7560	methylerythritol phosphate pathway II
ALFP_RS12775	PWY-7560	methylerythritol phosphate pathway II
ALFP_RS12790	PWY-723	alkylnitronates degradation
ALFP_RS12805	PWY-3781	aerobic respiration I (cytochrome c)
ALFP_RS12805	PWY-4302	aerobic respiration III (alternative oxidase pathway)
ALFP_RS12805	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
ALFP_RS12805	PWY-6692	Fe(II) oxidation
ALFP_RS12885	PWY-1042	glycolysis IV (plant cytosol)
ALFP_RS12885	PWY-5484	glycolysis II (from fructose 6-phosphate)
ALFP_RS12885	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ALFP_RS12885	PWY-7003	glycerol degradation to butanol
ALFP_RS12920	PWY-5669	phosphatidylethanolamine biosynthesis I
ALFP_RS12925	PWY-5103	L-isoleucine biosynthesis III
ALFP_RS12925	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ALFP_RS12930	PWY-5101	L-isoleucine biosynthesis II
ALFP_RS12930	PWY-5103	L-isoleucine biosynthesis III
ALFP_RS12930	PWY-5104	L-isoleucine biosynthesis IV
ALFP_RS12930	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
ALFP_RS12930	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
ALFP_RS12930	PWY-6389	(<i>S</i>)-acetoin biosynthesis
ALFP_RS12930	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ALFP_RS12935	PWY-5101	L-isoleucine biosynthesis II
ALFP_RS12935	PWY-5103	L-isoleucine biosynthesis III
ALFP_RS12935	PWY-5104	L-isoleucine biosynthesis IV
ALFP_RS12935	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
ALFP_RS12935	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
ALFP_RS12935	PWY-6389	(<i>S</i>)-acetoin biosynthesis
ALFP_RS12935	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ALFP_RS12975	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
ALFP_RS13045	PWY-5913	TCA cycle VI (obligate autotrophs)
ALFP_RS13045	PWY-6549	L-glutamine biosynthesis III
ALFP_RS13045	PWY-6728	methylaspartate cycle
ALFP_RS13045	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ALFP_RS13045	PWY-7124	ethylene biosynthesis V (engineered)
ALFP_RS13045	PWY-7254	TCA cycle VII (acetate-producers)
ALFP_RS13045	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ALFP_RS13215	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
ALFP_RS13215	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ALFP_RS13215	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
ALFP_RS13235	PWY-2941	L-lysine biosynthesis II
ALFP_RS13235	PWY-2942	L-lysine biosynthesis III
ALFP_RS13235	PWY-5097	L-lysine biosynthesis VI
ALFP_RS13270	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ALFP_RS13270	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ALFP_RS13290	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
ALFP_RS13290	PWY-7494	choline degradation IV
ALFP_RS13445	PWY-6690	cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate
ALFP_RS13460	PWY-5162	2-oxopentenoate degradation
ALFP_RS13460	PWY-5436	L-threonine degradation IV
ALFP_RS13460	PWY-5480	pyruvate fermentation to ethanol I
ALFP_RS13460	PWY-6587	pyruvate fermentation to ethanol III
ALFP_RS13460	PWY-7085	triethylamine degradation
ALFP_RS13460	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
ALFP_RS13465	PWY-5162	2-oxopentenoate degradation
ALFP_RS13485	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
ALFP_RS13520	PWY-5676	acetyl-CoA fermentation to butanoate II
ALFP_RS13520	PWY-5741	ethylmalonyl-CoA pathway
ALFP_RS13520	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
ALFP_RS13565	PWY-6703	preQ<sub>0</sub> biosynthesis
ALFP_RS13570	PWY-1622	formaldehyde assimilation I (serine pathway)
ALFP_RS13570	PWY-181	photorespiration
ALFP_RS13570	PWY-2161	folate polyglutamylation
ALFP_RS13570	PWY-2201	folate transformations I
ALFP_RS13570	PWY-3661	glycine betaine degradation I
ALFP_RS13570	PWY-3661-1	glycine betaine degradation II (mammalian)
ALFP_RS13570	PWY-3841	folate transformations II
ALFP_RS13570	PWY-5497	purine nucleobases degradation II (anaerobic)
ALFP_RS13585	PWY-1622	formaldehyde assimilation I (serine pathway)
ALFP_RS13585	PWY-181	photorespiration
ALFP_RS13585	PWY-2161	folate polyglutamylation
ALFP_RS13585	PWY-2201	folate transformations I
ALFP_RS13585	PWY-3661	glycine betaine degradation I
ALFP_RS13585	PWY-3661-1	glycine betaine degradation II (mammalian)
ALFP_RS13585	PWY-3841	folate transformations II
ALFP_RS13585	PWY-5497	purine nucleobases degradation II (anaerobic)
ALFP_RS13605	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
ALFP_RS13605	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
ALFP_RS13675	PWY-3781	aerobic respiration I (cytochrome c)
ALFP_RS13675	PWY-4521	arsenite oxidation I (respiratory)
ALFP_RS13675	PWY-6692	Fe(II) oxidation
ALFP_RS13675	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ALFP_RS13700	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ALFP_RS13700	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ALFP_RS13830	PWY-5392	reductive TCA cycle II
ALFP_RS13830	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ALFP_RS13830	PWY-5690	TCA cycle II (plants and fungi)
ALFP_RS13830	PWY-5913	TCA cycle VI (obligate autotrophs)
ALFP_RS13830	PWY-6728	methylaspartate cycle
ALFP_RS13830	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ALFP_RS13830	PWY-7254	TCA cycle VII (acetate-producers)
ALFP_RS13830	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ALFP_RS13860	PWY-5686	UMP biosynthesis
ALFP_RS13955	PWY-6123	inosine-5'-phosphate biosynthesis I
ALFP_RS13955	PWY-6124	inosine-5'-phosphate biosynthesis II
ALFP_RS13955	PWY-7234	inosine-5'-phosphate biosynthesis III
ALFP_RS13985	PWY-5686	UMP biosynthesis
ALFP_RS14215	PWY-2942	L-lysine biosynthesis III
ALFP_RS14260	PWY-5278	sulfite oxidation III
ALFP_RS14260	PWY-5340	sulfate activation for sulfonation
ALFP_RS14260	PWY-6683	sulfate reduction III (assimilatory)
ALFP_RS14260	PWY-6932	selenate reduction
ALFP_RS14265	PWY-5278	sulfite oxidation III
ALFP_RS14265	PWY-5340	sulfate activation for sulfonation
ALFP_RS14265	PWY-6683	sulfate reduction III (assimilatory)
ALFP_RS14265	PWY-6932	selenate reduction
ALFP_RS14295	PWY-5482	pyruvate fermentation to acetate II
ALFP_RS14295	PWY-5485	pyruvate fermentation to acetate IV
ALFP_RS14295	PWY-5497	purine nucleobases degradation II (anaerobic)
ALFP_RS14300	PWY-1281	sulfoacetaldehyde degradation I
ALFP_RS14300	PWY-5482	pyruvate fermentation to acetate II
ALFP_RS14300	PWY-5485	pyruvate fermentation to acetate IV
ALFP_RS14300	PWY-5497	purine nucleobases degradation II (anaerobic)
ALFP_RS14300	PWY-6637	sulfolactate degradation II
ALFP_RS14330	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
ALFP_RS14355	PWY-7039	phosphatidate metabolism, as a signaling molecule
ALFP_RS14360	PWY-5686	UMP biosynthesis
ALFP_RS14385	PWY-5269	cardiolipin biosynthesis II
ALFP_RS14385	PWY-5668	cardiolipin biosynthesis I
ALFP_RS14390	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
ALFP_RS14390	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
ALFP_RS14390	PWY-6896	thiamin salvage I
ALFP_RS14390	PWY-6897	thiamin salvage II
ALFP_RS14400	PWY-6167	flavin biosynthesis II (archaea)
ALFP_RS14400	PWY-6168	flavin biosynthesis III (fungi)
ALFP_RS14405	PWY-6167	flavin biosynthesis II (archaea)
ALFP_RS14405	PWY-6168	flavin biosynthesis III (fungi)
ALFP_RS14405	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
ALFP_RS14425	PWY-6825	phosphatidylcholine biosynthesis V
ALFP_RS14450	PWY-5344	L-homocysteine biosynthesis
ALFP_RS14450	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
ALFP_RS14600	PWY-6938	NADH repair
ALFP_RS14775	PWY-5386	methylglyoxal degradation I
ALFP_RS14785	PWY-5971	palmitate biosynthesis II (bacteria and plants)
ALFP_RS14785	PWY-5973	<i>cis</i>-vaccenate biosynthesis
ALFP_RS14785	PWY-5989	stearate biosynthesis II (bacteria and plants)
ALFP_RS14785	PWY-6113	superpathway of mycolate biosynthesis
ALFP_RS14785	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
ALFP_RS14785	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ALFP_RS14785	PWY-7663	gondoate biosynthesis (anaerobic)
ALFP_RS14785	PWY-7664	oleate biosynthesis IV (anaerobic)
ALFP_RS14785	PWYG-321	mycolate biosynthesis
ALFP_RS14925	PWY-5331	taurine biosynthesis
ALFP_RS14935	PWY-5392	reductive TCA cycle II
ALFP_RS14935	PWY-5537	pyruvate fermentation to acetate V
ALFP_RS14935	PWY-5538	pyruvate fermentation to acetate VI
ALFP_RS14935	PWY-5690	TCA cycle II (plants and fungi)
ALFP_RS14935	PWY-5913	TCA cycle VI (obligate autotrophs)
ALFP_RS14935	PWY-6728	methylaspartate cycle
ALFP_RS14935	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ALFP_RS14935	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ALFP_RS15050	PWY-4202	arsenate detoxification I (glutaredoxin)
ALFP_RS15050	PWY-4621	arsenate detoxification II (glutaredoxin)
ALFP_RS15260	PWY-5525	D-glucuronate degradation I
ALFP_RS15270	PWY-1622	formaldehyde assimilation I (serine pathway)
ALFP_RS15270	PWY-181	photorespiration
ALFP_RS15270	PWY-2161	folate polyglutamylation
ALFP_RS15270	PWY-2201	folate transformations I
ALFP_RS15270	PWY-3661	glycine betaine degradation I
ALFP_RS15270	PWY-3661-1	glycine betaine degradation II (mammalian)
ALFP_RS15270	PWY-3841	folate transformations II
ALFP_RS15270	PWY-5497	purine nucleobases degradation II (anaerobic)
ALFP_RS15305	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ALFP_RS15305	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ALFP_RS15340	PWY-5392	reductive TCA cycle II
ALFP_RS15340	PWY-5537	pyruvate fermentation to acetate V
ALFP_RS15340	PWY-5538	pyruvate fermentation to acetate VI
ALFP_RS15340	PWY-5690	TCA cycle II (plants and fungi)
ALFP_RS15340	PWY-5913	TCA cycle VI (obligate autotrophs)
ALFP_RS15340	PWY-6728	methylaspartate cycle
ALFP_RS15340	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ALFP_RS15340	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ALFP_RS15360	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ALFP_RS15470	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ALFP_RS15470	PWY-6416	quinate degradation II
ALFP_RS15470	PWY-6707	gallate biosynthesis
ALFP_RS15500	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ALFP_RS15565	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ALFP_RS15595	PWY-3341	L-proline biosynthesis III
ALFP_RS15595	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
ALFP_RS15620	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
ALFP_RS15700	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
ALFP_RS15710	PWY-5686	UMP biosynthesis
ALFP_RS15740	PWY-6523	nitrite-dependent anaerobic methane oxidation
ALFP_RS15740	PWY-6748	nitrate reduction VII (denitrification)
ALFP_RS15740	PWY-7084	nitrifier denitrification
ALFP_RS15745	PWY-3781	aerobic respiration I (cytochrome c)
ALFP_RS15745	PWY-4521	arsenite oxidation I (respiratory)
ALFP_RS15745	PWY-6692	Fe(II) oxidation
ALFP_RS15745	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ALFP_RS15780	PWY-6502	oxidized GTP and dGTP detoxification
ALFP_RS15780	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
ALFP_RS15780	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
ALFP_RS15780	PWY-6897	thiamin salvage II
ALFP_RS15780	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
ALFP_RS15780	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
ALFP_RS15780	PWY-7356	thiamin salvage IV (yeast)
ALFP_RS15780	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
ALFP_RS15855	PWY-2201	folate transformations I
ALFP_RS15855	PWY-3841	folate transformations II
ALFP_RS15925	PWY-6891	thiazole biosynthesis II (Bacillus)
ALFP_RS15925	PWY-6892	thiazole biosynthesis I (E. coli)
ALFP_RS15930	PWY-6910	hydroxymethylpyrimidine salvage
ALFP_RS15930	PWY-7356	thiamin salvage IV (yeast)
ALFP_RS15930	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
ALFP_RS15935	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
ALFP_RS15935	PWY-6153	autoinducer AI-2 biosynthesis I
ALFP_RS15935	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
ALFP_RS15975	PWY-5839	menaquinol-7 biosynthesis
ALFP_RS15975	PWY-5844	menaquinol-9 biosynthesis
ALFP_RS15975	PWY-5849	menaquinol-6 biosynthesis
ALFP_RS15975	PWY-5890	menaquinol-10 biosynthesis
ALFP_RS15975	PWY-5891	menaquinol-11 biosynthesis
ALFP_RS15975	PWY-5892	menaquinol-12 biosynthesis
ALFP_RS15975	PWY-5895	menaquinol-13 biosynthesis
ALFP_RS16020	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
ALFP_RS16020	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
ALFP_RS16030	PWY-6605	adenine and adenosine salvage II
ALFP_RS16030	PWY-6610	adenine and adenosine salvage IV
ALFP_RS16045	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
ALFP_RS16070	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
ALFP_RS16070	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
ALFP_RS16115	PWY-2201	folate transformations I
ALFP_RS16125	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
ALFP_RS16140	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ALFP_RS16140	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ALFP_RS16175	PWY-1622	formaldehyde assimilation I (serine pathway)
ALFP_RS16175	PWY-5484	glycolysis II (from fructose 6-phosphate)
ALFP_RS16195	PWY-5667	CDP-diacylglycerol biosynthesis I
ALFP_RS16195	PWY-5981	CDP-diacylglycerol biosynthesis III
ALFP_RS16205	PWY-6004	glycine betaine biosynthesis V (from glycine)
ALFP_RS16235	PWY-6167	flavin biosynthesis II (archaea)
ALFP_RS16235	PWY-6168	flavin biosynthesis III (fungi)
ALFP_RS16255	PWY-6825	phosphatidylcholine biosynthesis V
ALFP_RS16270	PWY-5033	nicotinate degradation II
ALFP_RS16270	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ALFP_RS16270	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ALFP_RS16270	PWY-6993	nicotine degradation II (pyrrolidine pathway)
ALFP_RS16270	PWY-7128	nicotine degradation III (VPP pathway)
ALFP_RS16270	PWY-722	nicotinate degradation I
ALFP_RS16315	PWY-5659	GDP-mannose biosynthesis
ALFP_RS16315	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
ALFP_RS16345	PWY-3221	dTDP-L-rhamnose biosynthesis II
ALFP_RS16345	PWY-6808	dTDP-D-forosamine biosynthesis
ALFP_RS16345	PWY-6942	dTDP-D-desosamine biosynthesis
ALFP_RS16345	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
ALFP_RS16345	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
ALFP_RS16345	PWY-6974	dTDP-L-olivose biosynthesis
ALFP_RS16345	PWY-6976	dTDP-L-mycarose biosynthesis
ALFP_RS16345	PWY-7104	dTDP-L-megosamine biosynthesis
ALFP_RS16345	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
ALFP_RS16345	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
ALFP_RS16345	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
ALFP_RS16345	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
ALFP_RS16345	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
ALFP_RS16345	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
ALFP_RS16345	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
ALFP_RS16345	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
ALFP_RS16345	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
ALFP_RS16345	PWY-7688	ALFP_RS16345
ALFP_RS16350	PWY-3221	dTDP-L-rhamnose biosynthesis II
ALFP_RS16350	PWY-6808	dTDP-D-forosamine biosynthesis
ALFP_RS16350	PWY-6942	dTDP-D-desosamine biosynthesis
ALFP_RS16350	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
ALFP_RS16350	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
ALFP_RS16350	PWY-6974	dTDP-L-olivose biosynthesis
ALFP_RS16350	PWY-6976	dTDP-L-mycarose biosynthesis
ALFP_RS16350	PWY-7104	dTDP-L-megosamine biosynthesis
ALFP_RS16350	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
ALFP_RS16350	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
ALFP_RS16350	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
ALFP_RS16350	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
ALFP_RS16350	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
ALFP_RS16350	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
ALFP_RS16350	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
ALFP_RS16350	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
ALFP_RS16350	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
ALFP_RS16350	PWY-7688	ALFP_RS16350
ALFP_RS16370	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ALFP_RS16380	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ALFP_RS16420	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ALFP_RS16420	PWY-6148	tetrahydromethanopterin biosynthesis
ALFP_RS16420	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
ALFP_RS16420	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
ALFP_RS16450	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ALFP_RS16525	PWY-6854	ethylene biosynthesis III (microbes)
ALFP_RS16695	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
ALFP_RS16725	PWY-6748	nitrate reduction VII (denitrification)
ALFP_RS16725	PWY-7084	nitrifier denitrification
ALFP_RS16755	PWY-3801	sucrose degradation II (sucrose synthase)
ALFP_RS16755	PWY-5054	sorbitol biosynthesis I
ALFP_RS16755	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
ALFP_RS16755	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ALFP_RS16755	PWY-5659	GDP-mannose biosynthesis
ALFP_RS16755	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ALFP_RS16755	PWY-621	sucrose degradation III (sucrose invertase)
ALFP_RS16755	PWY-622	starch biosynthesis
ALFP_RS16755	PWY-6981	chitin biosynthesis
ALFP_RS16755	PWY-6992	1,5-anhydrofructose degradation
ALFP_RS16755	PWY-7238	sucrose biosynthesis II
ALFP_RS16755	PWY-7347	sucrose biosynthesis III
ALFP_RS16755	PWY-7385	1,3-propanediol biosynthesis (engineered)
ALFP_RS16825	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
ALFP_RS16995	PWY-1361	benzoyl-CoA degradation I (aerobic)
ALFP_RS16995	PWY-5109	2-methylbutanoate biosynthesis
ALFP_RS16995	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
ALFP_RS16995	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
ALFP_RS16995	PWY-5177	glutaryl-CoA degradation
ALFP_RS16995	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ALFP_RS16995	PWY-6435	4-hydroxybenzoate biosynthesis V
ALFP_RS16995	PWY-6583	pyruvate fermentation to butanol I
ALFP_RS16995	PWY-6863	pyruvate fermentation to hexanol
ALFP_RS16995	PWY-6883	pyruvate fermentation to butanol II
ALFP_RS16995	PWY-6944	androstenedione degradation
ALFP_RS16995	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
ALFP_RS16995	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
ALFP_RS16995	PWY-7007	methyl ketone biosynthesis
ALFP_RS16995	PWY-7046	4-coumarate degradation (anaerobic)
ALFP_RS16995	PWY-7094	fatty acid salvage
ALFP_RS16995	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
ALFP_RS16995	PWY-735	jasmonic acid biosynthesis
ALFP_RS16995	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
ALFP_RS16995	PWY-7606	docosahexaenoate biosynthesis III (mammals)
ALFP_RS16995	PWY-7726	ALFP_RS16995
ALFP_RS17050	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ALFP_RS17050	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ALFP_RS17130	PWY-3781	aerobic respiration I (cytochrome c)
ALFP_RS17130	PWY-6692	Fe(II) oxidation
ALFP_RS17130	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
ALFP_RS17130	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ALFP_RS17205	PWY-1042	glycolysis IV (plant cytosol)
ALFP_RS17205	PWY-1622	formaldehyde assimilation I (serine pathway)
ALFP_RS17205	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
ALFP_RS17205	PWY-5484	glycolysis II (from fructose 6-phosphate)
ALFP_RS17205	PWY-5723	Rubisco shunt
ALFP_RS17205	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ALFP_RS17205	PWY-6886	1-butanol autotrophic biosynthesis
ALFP_RS17205	PWY-6901	superpathway of glucose and xylose degradation
ALFP_RS17205	PWY-7003	glycerol degradation to butanol
ALFP_RS17205	PWY-7124	ethylene biosynthesis V (engineered)
ALFP_RS17205	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
ALFP_RS17220	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
ALFP_RS17270	PWY-5101	L-isoleucine biosynthesis II
ALFP_RS17270	PWY-5103	L-isoleucine biosynthesis III
ALFP_RS17270	PWY-5104	L-isoleucine biosynthesis IV
ALFP_RS17270	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ALFP_RS17305	PWY-6654	phosphopantothenate biosynthesis III
ALFP_RS17370	PWY-5367	petroselinate biosynthesis
ALFP_RS17370	PWY-5515	L-arabinose degradation II
ALFP_RS17370	PWY-5525	D-glucuronate degradation I
ALFP_RS17370	PWY-5971	palmitate biosynthesis II (bacteria and plants)
ALFP_RS17370	PWY-5973	<i>cis</i>-vaccenate biosynthesis
ALFP_RS17370	PWY-5989	stearate biosynthesis II (bacteria and plants)
ALFP_RS17370	PWY-5994	palmitate biosynthesis I (animals and fungi)
ALFP_RS17370	PWY-6113	superpathway of mycolate biosynthesis
ALFP_RS17370	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
ALFP_RS17370	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ALFP_RS17370	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ALFP_RS17370	PWY-7663	gondoate biosynthesis (anaerobic)
ALFP_RS17370	PWY-7664	oleate biosynthesis IV (anaerobic)
ALFP_RS17370	PWYG-321	mycolate biosynthesis
ALFP_RS17450	PWY-6749	CMP-legionaminate biosynthesis I
ALFP_RS17465	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ALFP_RS17465	PWY-5667	CDP-diacylglycerol biosynthesis I
ALFP_RS17465	PWY-6453	stigma estolide biosynthesis
ALFP_RS17465	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
ALFP_RS17465	PWY-7587	oleate biosynthesis III (cyanobacteria)
ALFP_RS17485	PWY-3781	aerobic respiration I (cytochrome c)
ALFP_RS17485	PWY-4521	arsenite oxidation I (respiratory)
ALFP_RS17485	PWY-6692	Fe(II) oxidation
ALFP_RS17485	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ALFP_RS17545	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
ALFP_RS17550	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
ALFP_RS17550	PWY-3162	L-tryptophan degradation V (side chain pathway)
ALFP_RS17550	PWY-5057	L-valine degradation II
ALFP_RS17550	PWY-5076	L-leucine degradation III
ALFP_RS17550	PWY-5078	L-isoleucine degradation II
ALFP_RS17550	PWY-5079	L-phenylalanine degradation III
ALFP_RS17550	PWY-5082	L-methionine degradation III
ALFP_RS17550	PWY-5480	pyruvate fermentation to ethanol I
ALFP_RS17550	PWY-5486	pyruvate fermentation to ethanol II
ALFP_RS17550	PWY-5751	phenylethanol biosynthesis
ALFP_RS17550	PWY-6313	serotonin degradation
ALFP_RS17550	PWY-6333	acetaldehyde biosynthesis I
ALFP_RS17550	PWY-6342	noradrenaline and adrenaline degradation
ALFP_RS17550	PWY-6454	vancomycin resistance I
ALFP_RS17550	PWY-6587	pyruvate fermentation to ethanol III
ALFP_RS17550	PWY-6802	salidroside biosynthesis
ALFP_RS17550	PWY-6871	3-methylbutanol biosynthesis
ALFP_RS17550	PWY-6901	superpathway of glucose and xylose degradation
ALFP_RS17550	PWY-7013	L-1,2-propanediol degradation
ALFP_RS17550	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ALFP_RS17550	PWY-7118	chitin degradation to ethanol
ALFP_RS17550	PWY-7396	butanol and isobutanol biosynthesis (engineered)
ALFP_RS17600	PWY-5028	L-histidine degradation II
ALFP_RS17600	PWY-5030	L-histidine degradation III
ALFP_RS17610	PWY-5028	L-histidine degradation II
ALFP_RS17610	PWY-5030	L-histidine degradation III
ALFP_RS17615	PWY-5028	L-histidine degradation II
ALFP_RS17615	PWY-5030	L-histidine degradation III
ALFP_RS17710	PWY-5913	TCA cycle VI (obligate autotrophs)
ALFP_RS17710	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
ALFP_RS17710	PWY-6638	sulfolactate degradation III
ALFP_RS17710	PWY-6642	(<i>R</i>)-cysteate degradation
ALFP_RS17710	PWY-6643	coenzyme M biosynthesis II
ALFP_RS17710	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ALFP_RS17710	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ALFP_RS17710	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ALFP_RS17785	PWY-4041	&gamma;-glutamyl cycle
ALFP_RS17785	PWY-5826	hypoglycin biosynthesis
ALFP_RS17870	PWY-6164	3-dehydroquinate biosynthesis I
ALFP_RS17875	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ALFP_RS17890	PWY-2941	L-lysine biosynthesis II
ALFP_RS17890	PWY-2942	L-lysine biosynthesis III
ALFP_RS17890	PWY-5097	L-lysine biosynthesis VI
ALFP_RS17915	PWY-5674	nitrate reduction IV (dissimilatory)
ALFP_RS17925	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ALFP_RS17925	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
ALFP_RS18210	PWY-1361	benzoyl-CoA degradation I (aerobic)
ALFP_RS18210	PWY-5109	2-methylbutanoate biosynthesis
ALFP_RS18210	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
ALFP_RS18210	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
ALFP_RS18210	PWY-5177	glutaryl-CoA degradation
ALFP_RS18210	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ALFP_RS18210	PWY-6435	4-hydroxybenzoate biosynthesis V
ALFP_RS18210	PWY-6583	pyruvate fermentation to butanol I
ALFP_RS18210	PWY-6863	pyruvate fermentation to hexanol
ALFP_RS18210	PWY-6883	pyruvate fermentation to butanol II
ALFP_RS18210	PWY-6944	androstenedione degradation
ALFP_RS18210	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
ALFP_RS18210	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
ALFP_RS18210	PWY-7007	methyl ketone biosynthesis
ALFP_RS18210	PWY-7046	4-coumarate degradation (anaerobic)
ALFP_RS18210	PWY-7094	fatty acid salvage
ALFP_RS18210	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
ALFP_RS18210	PWY-735	jasmonic acid biosynthesis
ALFP_RS18210	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
ALFP_RS18210	PWY-7606	docosahexaenoate biosynthesis III (mammals)
ALFP_RS18210	PWY-7726	ALFP_RS18210
ALFP_RS18235	PWY-6683	sulfate reduction III (assimilatory)
ALFP_RS18240	PWY-6683	sulfate reduction III (assimilatory)
ALFP_RS18245	PWY-5194	siroheme biosynthesis
ALFP_RS18245	PWY-5441	S-methyl-L-methionine cycle
ALFP_RS18245	PWY-702	L-methionine biosynthesis II
ALFP_RS18245	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
ALFP_RS18515	PWY-5669	phosphatidylethanolamine biosynthesis I
ALFP_RS18580	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)