locus strain_id interpro function go others ALFP_RS00005 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001957|IPR003593|IPR013159|IPR013317|IPR018312|IPR020591|IPR024633|IPR027417 AAA+ ATPase domain|Chromosomal replication control, initiator DnaA|Chromosomal replication control, initiator DnaA, conserved site|Chromosomal replication control, initiator DnaA-like|Chromosomal replication initiator protein DnaA|Chromosomal replication initiator, DnaA C-terminal|DnaA N-terminal domain|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275|GO:0043565 G3DSA:1.10.1750.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00377|PF00308|PF08299|PF11638|PR00051|PS01008|SM00382|SM00760|SSF52540|TIGR00362 ALFP_RS00010 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001001|IPR022634|IPR022635|IPR022637 DNA polymerase III, beta chain|DNA polymerase III, beta chain, C-terminal|DNA polymerase III, beta chain, N-terminal|DNA polymerase III, beta chain, central GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 G3DSA:3.10.150.10|PF00712|PF02767|PF02768|PIRSF000804|SM00480|SSF55979|TIGR00663 ALFP_RS00015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000565|IPR001241|IPR002288|IPR003594|IPR006171|IPR011557|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA gyrase, subunit B|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_01898|PF00204|PF00986|PF01751|PF02518|PR00418|PR01159|PS00177|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01059 ALFP_RS00020 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|PF00849|PF01479|PS01149|SM00363|SSF55120|SSF55174|TIGR00093 ALFP_RS00025 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 ALFP_RS00030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 ALFP_RS00035 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 ALFP_RS00040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|SSF53850 ALFP_RS00045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|SSF53474 ALFP_RS00055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|SSF51316 ALFP_RS00060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001702|IPR002299|IPR023614 Porin domain|Porin, Gram-negative type|Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 G3DSA:2.40.160.10|PF13609|PR00182|PR00184|SSF56935 ALFP_RS00065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002220|IPR013785 Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|PR00146|SM01130|SSF51569 ALFP_RS00070 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 ALFP_RS00075 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF13669|SSF54593 ALFP_RS00080 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001387|IPR010982|IPR011051|IPR013096|IPR014710 Cro/C1-type helix-turn-helix domain|Cupin 2, conserved barrel|Lambda repressor-like, DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF01381|PF07883|SM00530|SSF47413|SSF51182 ALFP_RS00085 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|PR00420|SSF51905 ALFP_RS00090 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR012675 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain GO:0009055|GO:0051536 G3DSA:3.10.20.30|PF13510|SSF54292 ALFP_RS00095 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007419|IPR017224|IPR023753 BFD-like [2Fe-2S]-binding domain|FAD/NAD(P)-binding domain|Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF04324|PF07992|PIRSF037495|PR00368|PR00411|SSF51905 ALFP_RS00100 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|SSF52096 ALFP_RS00105 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004136|IPR013785 Aldolase-type TIM barrel|Nitronate monooxygenase GO:0003824|GO:0018580|GO:0055114 G3DSA:3.20.20.70|PF03060|SSF51412 ALFP_RS00110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS00115 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00072|PS00073|SSF47203|SSF56645 ALFP_RS00120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 ALFP_RS00125 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 ALFP_RS00130 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011032|IPR013149|IPR013154|IPR014188|IPR016040|IPR020843 Acrylyl-CoA reductase AcuI|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735|TIGR02823 ALFP_RS00135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.40.50.10540|PF02515|SSF89796 ALFP_RS00140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 ALFP_RS00145 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PF06808 ALFP_RS00150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 ALFP_RS00155 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000951|IPR001041|IPR001433|IPR006058|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Oxidoreductase FAD/NAD(P)-binding|Phthalate dioxygenase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PR00409|PS00197|SSF52343|SSF54292|SSF63380 ALFP_RS00160 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015881|IPR017941 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0016491|GO:0016705|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PS00570|SSF50022|SSF55961 ALFP_RS00165 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000506|IPR008927|IPR013023|IPR013116|IPR013328|IPR016040|IPR023753 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Acetohydroxy acid isomeroreductase C-terminal|Acetohydroxy acid isomeroreductase, NADPH-binding domain|FAD/NAD(P)-binding domain|Ketol-acid reductoisomerase|NAD(P)-binding domain GO:0004455|GO:0009082|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.50.50.60|MF_00435|PF01450|PF07991|SSF48179|SSF51735|TIGR00465 ALFP_RS00170 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS00175 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|SM01007|SSF53639 ALFP_RS00180 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018389|IPR026289 Solute binding protein, mannitol/chloroaromatic system-like|TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PIRSF039026 ALFP_RS00185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 ALFP_RS00190 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS00195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS00200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 ALFP_RS00205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 ALFP_RS00215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PR00111|SSF53474 ALFP_RS00220 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR011663|IPR011991|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|SM00345|SM00866|SSF46785|SSF64288 ALFP_RS00225 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 ALFP_RS00230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013785 Aldolase-type TIM barrel GO:0003824 G3DSA:3.20.20.70 ALFP_RS00235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS00240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 ALFP_RS00245 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS00250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS00255 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR026045 Ferric binding protein G3DSA:3.40.190.10|PF13343|PIRSF002825|SSF53850 ALFP_RS00260 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 ALFP_RS00265 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS00270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|SSF53383 ALFP_RS00275 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012649|IPR015813 Phosphonopyruvate hydrolase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF13714|SSF51621|TIGR02321 ALFP_RS00280 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003495|IPR011629|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|SM00833|SSF52540|SSF90002 ALFP_RS00285 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS00290 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS00295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13410|PF13417|SSF47616|SSF52833 ALFP_RS00300 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 PF06189 ALFP_RS00305 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 ALFP_RS00310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000917|IPR017849|IPR017850|IPR032506 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Domain of unknown function DUF4976|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|PF16347|SSF53649 ALFP_RS00315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS00320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PS01117|SM00347|SSF46785 ALFP_RS00325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.30.70.20|G3DSA:3.40.50.970|PF02775|SSF52518 ALFP_RS00330 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002869|IPR019752 Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016491|GO:0016903|GO:0055114 G3DSA:3.40.920.10|PF01558|SSF53323 ALFP_RS00335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|SM00347|SSF46785 ALFP_RS00340 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637 ALFP_RS00345 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001155|IPR013785|IPR023753 Aldolase-type TIM barrel|FAD/NAD(P)-binding domain|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|G3DSA:3.50.50.60|PF00724|PR00420|SSF51395|SSF51905 ALFP_RS00350 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 ALFP_RS00355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|SSF56529 ALFP_RS00360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000132|IPR003010 Carbon-nitrogen hydrolase|Nitrilase/cyanide hydratase, conserved site GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PS00920|SSF56317 ALFP_RS00365 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 G3DSA:3.50.30.50|PF04199|SSF102198 ALFP_RS00370 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000951|IPR001041|IPR001433|IPR006058|IPR008333|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phthalate dioxygenase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00409|PS00197|SSF52343|SSF54292|SSF63380 ALFP_RS00375 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001663|IPR015879|IPR017941 Aromatic-ring-hydroxylating dioxygenase, alpha subunit|Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0006725|GO:0016491|GO:0016708|GO:0019439|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|PR00090|SSF50022|SSF55961 ALFP_RS00380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000391|IPR032710 NTF2-like domain|Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 G3DSA:3.10.450.50|PF00866|SSF54427 ALFP_RS00385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 ALFP_RS00390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002155|IPR016039 Thiolase|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PIRSF000429|SSF53901 ALFP_RS00395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002878|IPR012340|IPR022002 Domain of unknown function DUF35, OB-fold, C-terminal|Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal|Nucleic acid-binding, OB-fold PF01796|PF12172|SSF50249 ALFP_RS00400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00081|PS00061|SSF51735 ALFP_RS00405 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 ALFP_RS00410 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 ALFP_RS00415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|SSF53850 ALFP_RS00420 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 ALFP_RS00430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025737 MetA-pathway of phenol degradation, putative PF13557 ALFP_RS00435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 ALFP_RS00440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PR00420|SSF51905 ALFP_RS00445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|SM00903|SSF50475 ALFP_RS00450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF13450|SSF51905 ALFP_RS00455 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR018060|IPR018062 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|PS00041|SM00342|SSF46689 ALFP_RS00460 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|SM00903|SSF50475 ALFP_RS00465 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 ALFP_RS00475 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003190|IPR009010 Aspartate decarboxylase|Aspartate decarboxylase-like domain GO:0004068|GO:0006523 G3DSA:2.40.40.20|MF_00446|PD009294|PF02261|SSF50692|TIGR00223 ALFP_RS00480 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010105|IPR011662|IPR012910 Secretin/TonB, short N-terminal domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SM00965|SSF56935|TIGR01783 ALFP_RS00485 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006860|IPR012373|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal PF04773|PF16220|PIRSF018266 ALFP_RS00490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 ALFP_RS00495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 ALFP_RS00500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 ALFP_RS00505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS00510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS00515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000914|IPR023765|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain|Solute-binding protein family 5, conserved site GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PS01040|SSF53850 ALFP_RS00520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001126|IPR017961|IPR022880 DNA polymerase IV|DNA polymerase, Y-family, little finger domain|UmuC domain GO:0003684|GO:0003887|GO:0006281 G3DSA:1.10.150.20|G3DSA:3.30.1490.100|G3DSA:3.30.70.270|MF_01113|PF00817|PF11799|SSF100879|SSF56672 ALFP_RS00525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004636|IPR005814|IPR015421|IPR015422|IPR015424 Acetylornithine/Succinylornithine transaminase family|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006525|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01107|PF00202|PIRSF000521|PS00600|SSF53383 ALFP_RS00535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011251|IPR019911 Alkanesulphonate monooxygenase, FMN-dependent|Luciferase-like domain GO:0008726|GO:0016705|GO:0055114 G3DSA:3.20.20.30|MF_01229|PF00296|SSF51679|TIGR03565 ALFP_RS00540 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|SSF52218 ALFP_RS00545 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011051|IPR014710|IPR025979 ChrR-like cupin domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF12973|SSF51182 ALFP_RS00550 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR018060|IPR018062 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|PS00041|SM00342|SSF46689 ALFP_RS00555 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 ALFP_RS00560 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS00565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002638|IPR006242|IPR013785|IPR022412|IPR027277 Aldolase-type TIM barrel|Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD|Putative pyrophosphorylase ModD|Quinolinate phosphoribosyl transferase, C-terminal|Quinolinate phosphoribosyl transferase, N-terminal GO:0003824|GO:0004514|GO:0009435|GO:0016763 G3DSA:3.20.20.70|G3DSA:3.90.1170.20|PF01729|PF02749|PIRSF006250|SSF51690|SSF54675|TIGR01334 ALFP_RS00570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR011867 ABC transporter type 1, transmembrane domain MetI-like|Molybdate ABC transporter, permease protein GO:0006810|GO:0015098|GO:0015689|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR02141 ALFP_RS00575 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 G3DSA:3.40.190.10|PF13531|SSF53850|TIGR01256 ALFP_RS00580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001465|IPR006253|IPR011076|IPR023310 Malate synthase|Malate synthase G|Malate synthase G, beta sub-domain|Malate synthase-like GO:0003824|GO:0004474|GO:0006097 G3DSA:1.10.1860.10|G3DSA:1.20.1220.12|G3DSA:2.170.170.11|G3DSA:3.20.20.360|MF_00641|PF01274|SSF51645|TIGR01345 ALFP_RS00585 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000845|IPR011271|IPR018953 AMP nucleosidase|AMP nucleoside phosphorylase, N-terminal|Nucleoside phosphorylase domain GO:0003824|GO:0008714|GO:0009116|GO:0044209 G3DSA:3.30.1730.10|G3DSA:3.40.50.1580|MF_01932|PF01048|PF10423|SSF53167|TIGR01717 ALFP_RS00590 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637 ALFP_RS00595 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|TIGR00787 ALFP_RS00600 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 ALFP_RS00605 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 ALFP_RS00610 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001214 SET domain GO:0005515 G3DSA:2.170.270.10|PF00856|SM00317|SSF82199 ALFP_RS00615 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR012846|IPR029035|IPR029061 Acetolactate synthase, large subunit, biosynthetic|DHS-like NAD/FAD-binding domain|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0003984|GO:0009082|GO:0030976|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|SSF52467|SSF52518|TIGR00118 ALFP_RS00620 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|SSF53850|TIGR00787 ALFP_RS00625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 ALFP_RS00630 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 ALFP_RS00635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007418 Protein of unknown function DUF474 PIRSF015875 ALFP_RS00640 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000380|IPR003601|IPR003602|IPR005738|IPR006171|IPR013497|IPR013824|IPR013825|IPR023405|IPR023406|IPR025589 DNA topoisomerase III|DNA topoisomerase, type IA|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, active site|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 1|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|Topoisomerase C-terminal repeat|Toprim domain GO:0003677|GO:0003916|GO:0003917|GO:0006265 G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.40.50.140|PF01131|PF01751|PF13342|PR00417|PS00396|SM00436|SM00437|SM00493|SSF56712|TIGR01056 ALFP_RS00645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018677|IPR025513|IPR025833 Domain of unknown function DUF2157|Domain of unknown function DUF4401|GDYXXLXY protein PF09925|PF14345|PF14351 ALFP_RS00650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007456|IPR011991 Smg|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|MF_00598|PF04361 ALFP_RS00655 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000924|IPR014729|IPR020058|IPR022380 Glutamyl-Q tRNA(Asp) synthetase|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0005524|GO:0005737|GO:0006400|GO:0016876|GO:0043039 G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_01428|PF00749|PR00987|SSF52374|TIGR03838 ALFP_RS00660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000089|IPR001882|IPR005479|IPR005481|IPR005482|IPR011053|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Biotin-binding site|Biotin/lipoyl attachment|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif|Single hybrid motif GO:0003824|GO:0005524 G3DSA:2.40.50.100|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF00364|PF02785|PF02786|PS00188|PS00866|PS00867|SM00878|SM01209|SSF51230|SSF51246|SSF52440|SSF56059 ALFP_RS00665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000022|IPR029045 Carboxyl transferase|ClpP/crotonase-like domain G3DSA:3.90.226.10|PF01039|SSF52096 ALFP_RS00670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002155|IPR016039|IPR020610|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00099|SSF53901|TIGR01930 ALFP_RS00675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 MF_00747|PD043552|PF06315|PIRSF000719 ALFP_RS00680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00072|PS00073|SSF47203|SSF56645 ALFP_RS00685 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|SM00422|SSF46955 ALFP_RS00690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 ALFP_RS00695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000277|IPR006233|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Cystathionine beta-lyase, bacterial|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004121|GO:0005737|GO:0006520|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|SSF53383|TIGR01324 ALFP_RS00700 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001853|IPR012336|IPR023205 DSBA-like thioredoxin domain|Thiol:disulphide interchange protein DsbA/DsbL|Thioredoxin-like fold GO:0015035 G3DSA:3.40.30.10|PF01323|PIRSF001488|SSF52833 ALFP_RS00705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|SSF110997 ALFP_RS00710 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001278|IPR001412|IPR005148|IPR008909|IPR009080|IPR014729 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Arginine-tRNA ligase|Arginyl tRNA synthetase N-terminal domain|DALR anticodon binding|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004814|GO:0005524|GO:0005737|GO:0006418|GO:0006420 G3DSA:1.10.730.10|G3DSA:3.30.1360.70|G3DSA:3.40.50.620|MF_00123|PF00750|PF03485|PF05746|PR01038|PS00178|SM00836|SM01016|SSF47323|SSF52374|SSF55190|TIGR00456 ALFP_RS00715 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006530|IPR018712|IPR022385 Domain of unknown function DUF2235|Rhs repeat-associated core|YD repeat GO:0097264 PF09994|TIGR01643|TIGR03696 ALFP_RS00720 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR014991 Protein of unknown function DUF1840 PF08895 ALFP_RS00730 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000891|IPR002034|IPR005668|IPR013709|IPR013785 2-isopropylmalate synthase|2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain|Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Pyruvate carboxyltransferase GO:0003824|GO:0003852|GO:0009098|GO:0019752|GO:0046912 G3DSA:3.20.20.70|MF_00572|PF00682|PF08502|PS00815|PS00816|SM00917|SSF110921|SSF51569|SSF89000|TIGR00970 ALFP_RS00740 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000394|IPR007046|IPR007634 RNA polymerase sigma factor 54|RNA polymerase sigma factor 54, DNA-binding|RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PF00309|PF04552|PF04963|PIRSF000774|PR00045|PS00717|PS00718|TIGR02395 ALFP_RS00745 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010105|IPR010917|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|SSF56935|TIGR01783 ALFP_RS00750 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000573|IPR004431|IPR015928 3-isopropylmalate dehydratase, small subunit|Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase/3-isopropylmalate dehydratase, swivel GO:0003861|GO:0008152|GO:0009098|GO:0009316 G3DSA:3.20.19.10|MF_01031|PF00694|SSF52016|TIGR00171 ALFP_RS00755 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001030|IPR004430|IPR015931|IPR015932|IPR018136 3-isopropylmalate dehydratase, large subunit|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0003861|GO:0008152|GO:0009098|GO:0051539 G3DSA:3.30.499.10|G3DSA:3.40.1060.10|MF_01026|PF00330|PR00415|PS00450|PS01244|SSF53732|TIGR00170 ALFP_RS00760 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000891|IPR002034|IPR013785 Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Pyruvate carboxyltransferase GO:0003824|GO:0019752|GO:0046912 G3DSA:3.20.20.70|PF00682|PS00815|SSF51569 ALFP_RS00765 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 ALFP_RS00770 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 ALFP_RS00775 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 ALFP_RS00780 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480 ALFP_RS00785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 ALFP_RS00790 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS00795 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007419 BFD-like [2Fe-2S]-binding domain PF04324 ALFP_RS00800 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002024|IPR008331|IPR009078|IPR012347 Bacterioferritin|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006826|GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|PIRSF002560|PR00601|PS00549|SSF47240|TIGR00754 ALFP_RS00810 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000795|IPR004161|IPR004548|IPR005225|IPR009000|IPR009022|IPR027417|IPR031157|IPR032090 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Peptide chain release factor 3|Peptide chain release factor 3, C-terminal|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525|GO:0005737|GO:0006415|GO:0016149 G3DSA:2.40.30.10|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00072|PF00009|PF03144|PF16658|PR00315|PS00301|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR00503 ALFP_RS00815 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PIRSF006324 ALFP_RS00820 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PS00039|SM00487|SM00490|SSF52540 ALFP_RS00825 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007156|IPR023353 LemA|LemA-like domain G3DSA:1.20.1440.20|PF04011|SSF140478 ALFP_RS00830 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007621 TPM domain PF04536 ALFP_RS00835 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007621 TPM domain PF04536 ALFP_RS00840 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021296 Protein of unknown function DUF2868 PF11067 ALFP_RS00845 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006073|IPR021871|IPR027417 GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|Protein of unknown function DUF3482 GO:0005525 G3DSA:3.40.50.300|PF01926|PF11981|SSF52540 ALFP_RS00850 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007438 Protein of unknown function DUF488 PF04343 ALFP_RS00855 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007341 Transglycosylase-associated protein GO:0016021 PF04226 ALFP_RS00860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023631 Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304 ALFP_RS00870 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004175|IPR009097 RNA 2',3'-cyclic phosphodiesterase|RNA ligase/cyclic nucleotide phosphodiesterase GO:0004113|GO:0008664 G3DSA:3.90.1140.10|PF13563|SSF55144|TIGR02258 ALFP_RS00875 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS00885 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480 ALFP_RS00890 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 ALFP_RS00895 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PD968187|PF06808|PIRSF006066|TIGR00786 ALFP_RS00900 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001258|IPR011042 NHL repeat|Six-bladed beta-propeller, TolB-like GO:0005515 G3DSA:2.120.10.30|PF01436|SSF63829 ALFP_RS00905 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002645|IPR003453|IPR030802 ABC transport permease subunit MlaE, Proteobacteria|ABC transporter permease MalE|STAS domain GO:0006810|GO:0043190 PF02405|PF13466|SSF52091|TIGR00056 ALFP_RS00910 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS00915 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003399 Mce/MlaD G3DSA:1.10.287.950|PF02470 ALFP_RS00920 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005586 ABC-type transport auxiliary lipoprotein component G3DSA:3.40.50.10610|PF03886|SSF159594 ALFP_RS00930 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01509 ALFP_RS00935 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480 ALFP_RS00940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 ALFP_RS00945 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 ALFP_RS00950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002155|IPR016039 Thiolase|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PIRSF000429|SSF53901 ALFP_RS00955 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 ALFP_RS00960 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|SSF53850 ALFP_RS00965 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 ALFP_RS00970 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS00975 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|SSF51905|SSF54373 ALFP_RS00980 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 ALFP_RS00985 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003798 DNA recombination RmuC PF02646 ALFP_RS00990 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40|SSF47413 ALFP_RS00995 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 PF09907 ALFP_RS01000 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000014|IPR000160|IPR001633|IPR001638|IPR013656|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain|PAS fold-4|Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|G3DSA:3.40.190.10|PF00497|PF00563|PF00990|PF08448|SM00052|SM00062|SM00267|SSF141868|SSF53850|SSF55073|SSF55785|TIGR00254 ALFP_RS01005 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001792|IPR017968|IPR020456 Acylphosphatase|Acylphosphatase, conserved site|Acylphosphatase-like domain GO:0003998 G3DSA:3.30.70.100|PF00708|PR00112|PS00150|SSF54975 ALFP_RS01010 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000281|IPR001347|IPR009057|IPR011991 Helix-turn-helix protein RpiR|Homeodomain-like|Sugar isomerase (SIS)|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005975|GO:0006355|GO:0030246 G3DSA:1.10.10.10|G3DSA:3.40.50.10490|PF01380|PF01418|SSF46689|SSF53697 ALFP_RS01015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|SSF53850|TIGR02122 ALFP_RS01020 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010656|IPR011853|IPR021814 Protein of unknown function DUF3394|TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter, 4TM/12TM fusion protein PF06808|PF11874|TIGR02123 ALFP_RS01025 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006145|IPR006224|IPR020103 Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PF00849|PS01129|SSF55120 ALFP_RS01030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004550|IPR006034|IPR020827|IPR027473|IPR027474|IPR027475 Asparaginase/glutaminase|Asparaginase/glutaminase, active site 1|Asparaginase/glutaminase, active site 2|L-asparaginase, C-terminal domain|L-asparaginase, N-terminal|L-asparaginase, type II GO:0004067|GO:0006520|GO:0006528 G3DSA:3.40.50.1170|G3DSA:3.40.50.40|PF00710|PIRSF001220|PIRSF500176|PR00139|PS00144|PS00917|SM00870|SSF53774|TIGR00520 ALFP_RS01035 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 ALFP_RS01040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 ALFP_RS01045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 ALFP_RS01050 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 ALFP_RS01055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006095|IPR006096|IPR006097|IPR014362|IPR016040|IPR033524 Glutamate dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal|Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain|Leu/Phe/Val dehydrogenases active site|NAD(P)-binding domain GO:0006520|GO:0016491|GO:0016639|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|PF00208|PF02812|PIRSF000185|PR00082|PS00074|SM00839|SSF51735|SSF53223 ALFP_RS01060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001608|IPR011078|IPR029066 Alanine racemase, N-terminal|PLP-binding barrel|Uncharacterised protein family UPF0001 G3DSA:3.20.20.10|PF01168|SSF51419|TIGR00044 ALFP_RS01065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|SSF53850 ALFP_RS01070 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|SM00100|SSF46785|SSF51206 ALFP_RS01075 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.40.50.980|PF00501|PS00455|SSF56801 ALFP_RS01080 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 ALFP_RS01085 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS01090 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS01095 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 ALFP_RS01100 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 ALFP_RS01105 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|SSF56801 ALFP_RS01110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 ALFP_RS01120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000138|IPR000891|IPR013785 Aldolase-type TIM barrel|Hydroxymethylglutaryl-CoA lyase, active site|Pyruvate carboxyltransferase GO:0003824|GO:0004419 G3DSA:3.20.20.70|PF00682|PS01062|SSF51569 ALFP_RS01125 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003488 DNA recombination-mediator protein A GO:0009294 G3DSA:3.40.50.450|PF02481|SSF102405|TIGR00732 ALFP_RS01130 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023635 Peptide deformylase G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|SSF56420|TIGR00079 ALFP_RS01135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001555|IPR002376|IPR005793|IPR005794|IPR011034 Formyl transferase, C-terminal|Formyl transferase, C-terminal-like|Formyl transferase, N-terminal|Methionyl-tRNA formyltransferase|Phosphoribosylglycinamide formyltransferase, active site GO:0003824|GO:0004479|GO:0009058|GO:0016742|GO:0071951 G3DSA:3.10.25.10|G3DSA:3.40.50.170|MF_00182|PF00551|PF02911|PS00373|SSF50486|SSF53328|TIGR00460 ALFP_RS01140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS01145 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR020556|IPR023631 Amidase signature domain|Amidase, conserved site G3DSA:3.90.1300.10|PF01425|PS00571|SSF75304 ALFP_RS01150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021269 Protein of unknown function DUF2848 PF11010 ALFP_RS01155 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 ALFP_RS01160 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 ALFP_RS01165 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 G3DSA:3.40.190.10|PF03480|SSF53850 ALFP_RS01170 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009906|IPR016938 Protein of unknown function DUF1445|Uncharacterised protein family UPF0317 G3DSA:3.40.1640.10|MF_01830|PF07286|PIRSF029755|SSF160920 ALFP_RS01175 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS01180 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002201|IPR011908 Glycosyl transferase, family 9|Lipopolysaccharide heptosyltransferase I GO:0008152|GO:0008920|GO:0009244|GO:0016757 G3DSA:3.40.50.2000|PF01075|SSF53756|TIGR02193 ALFP_RS01185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal G3DSA:3.40.50.2000|PF04413|SSF53756 ALFP_RS01190 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 ALFP_RS01195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005771|IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011|GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|SSF53448|TIGR01099 ALFP_RS01200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004619 Type III pantothenate kinase GO:0004594 G3DSA:3.30.420.40|MF_01274|PF03309|SSF53067|TIGR00671 ALFP_RS01205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003142|IPR004143|IPR004408|IPR008988 Biotin protein ligase, C-terminal|Biotin--acetyl-CoA-carboxylase ligase|Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain|Transcriptional repressor, C-terminal GO:0004077|GO:0006464 G3DSA:2.30.30.100|G3DSA:3.30.930.10|PF02237|PF03099|SSF50037|SSF55681|TIGR00121 ALFP_RS01210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003140|IPR029058 Alpha/Beta hydrolase fold|Phospholipase/carboxylesterase/thioesterase GO:0016787 G3DSA:3.40.50.1820|PF02230|SSF53474 ALFP_RS01215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001967|IPR012338|IPR012907|IPR015956|IPR018044 Beta-lactamase/transpeptidase-like|Penicillin-binding protein-associated|Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0004180|GO:0006508|GO:0009002 G3DSA:2.60.410.10|G3DSA:3.40.710.10|PF00768|PF07943|PR00725|SM00936|SSF56601|SSF69189 ALFP_RS01220 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|SSF56752 ALFP_RS01225 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007454|IPR027471 Uncharacterised protein family UPF0250|YbeD-like domain G3DSA:3.30.70.1460|MF_00659|PF04359|SSF117991 ALFP_RS01230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000544|IPR004143|IPR020605 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain|Octanoyltransferase|Octanoyltransferase, conserved site GO:0005737|GO:0006464|GO:0009107|GO:0016415 G3DSA:3.90.1550.10|MF_00013|PD006086|PF03099|PIRSF016262|PS01313|SSF55681|TIGR00214 ALFP_RS01235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001753|IPR014748|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|SSF52096 ALFP_RS01240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003698|IPR006638|IPR007197|IPR013785|IPR031691 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Lipoyl synthase|Lipoyl synthase, N-terminal|Radical SAM GO:0003824|GO:0009107|GO:0016992|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_00206|PF04055|PF16881|PIRSF005963|SM00729|SSF102114|TIGR00510 ALFP_RS01250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002043|IPR005122 Uracil-DNA glycosylase|Uracil-DNA glycosylase-like GO:0004844|GO:0006281|GO:0006284 G3DSA:3.40.470.10|MF_00148|PF03167|SM00986|SM00987|SSF52141|TIGR00628 ALFP_RS01280 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|SM00100|SM00419|SSF46785|SSF51206 ALFP_RS01290 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001455|IPR018720 Domain of unknown function DUF2249|TusA-like domain G3DSA:3.30.110.40|PF10006|SSF64307 ALFP_RS01295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001539 Peptidase U32 GO:0006508|GO:0008233 PF01136|PS01276 ALFP_RS01300 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001539 Peptidase U32 GO:0006508|GO:0008233 PF01136 ALFP_RS01305 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003033 SCP2 sterol-binding domain G3DSA:3.30.1050.10|PF02036|SSF55718 ALFP_RS01310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007197|IPR012840|IPR013785 Aldolase-type TIM barrel|Anaerobic ribonucleoside-triphosphate reductase activating protein|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF13353|SSF102114|TIGR02495 ALFP_RS01315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 PF13597 ALFP_RS01320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 G3DSA:3.20.70.20|PF13597|SSF51998|TIGR02487 ALFP_RS01325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001310|IPR011146|IPR026026 HIT-like domain|Histidine triad (HIT) protein|Histidine triad hydrolase, Hint-type GO:0003824 G3DSA:3.30.428.10|PF01230|PIRSF000714|SSF54197 ALFP_RS01330 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001468|IPR011060|IPR013785|IPR013798 Aldolase-type TIM barrel|Indole-3-glycerol phosphate synthase|Indole-3-glycerol phosphate synthase, conserved site|Ribulose-phosphate binding barrel GO:0003824|GO:0004425|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00134_B|PF00218|PS00614|SSF51366 ALFP_RS01335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000312|IPR005940|IPR017459 Anthranilate phosphoribosyl transferase|Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase, family 3 GO:0000162|GO:0004048|GO:0008152|GO:0016757 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|MF_00211|PF00591|PF02885|SSF47648|SSF52418|TIGR01245 ALFP_RS01340 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006221|IPR017926|IPR029062 Anthranilate synthase/para-aminobenzoate synthase like domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0008152 G3DSA:3.40.50.880|PF00117|PR00096|PR00097|PR00099|SSF52317|TIGR00566 ALFP_RS01345 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005256|IPR005801|IPR006805|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I, N-terminal|Anthranilate synthase component I, PabB-like|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal GO:0000162|GO:0004049|GO:0009058|GO:0016833 G3DSA:3.60.120.10|PF00425|PF04715|PR00095|SSF56322|TIGR00564 ALFP_RS01350 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006346|IPR006439|IPR023198|IPR023214 2-phosphoglycolate phosphatase, prokaryotic|HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0008967|GO:0016787|GO:0046295 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|MF_00495|PF13419|SSF56784|TIGR01449|TIGR01509|TIGR01549 ALFP_RS01355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00990|SM00052|SM00267|SSF141868|SSF54631|SSF55073|TIGR00254 ALFP_RS01360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000056|IPR011060|IPR013785|IPR026019 Aldolase-type TIM barrel|Ribulose-phosphate 3-epimerase|Ribulose-phosphate 3-epimerase-like|Ribulose-phosphate binding barrel GO:0003824|GO:0004750|GO:0005975|GO:0006098|GO:0008152|GO:0016857 G3DSA:3.20.20.70|PF00834|PIRSF001461|PS01086|SSF51366|TIGR01163 ALFP_RS01365 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007474|IPR023065 ApaG domain|Uncharacterised protein family ApaG G3DSA:2.60.40.1470|MF_00791|PF04379|SSF110069 ALFP_RS01370 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005300|IPR009009|IPR010611|IPR026044 3D domain|Lytic transglycosylase MltA|Membrane-bound lytic murein transglycosylase A|RlpA-like protein, double-psi beta-barrel domain GO:0004553|GO:0009254|GO:0019867 G3DSA:2.40.40.10|PF03562|PF06725|PIRSF019422|SM00925|SSF50685 ALFP_RS01375 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002938|IPR010971|IPR018168|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain|Ubiquinone biosynthesis hydroxylase UbiH/COQ6|Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0006744|GO:0016491|GO:0016709|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01494|PR00420|PS01304|SSF51905|TIGR01988 ALFP_RS01380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009094|IPR012336|IPR017937|IPR018950 Disulphide bond isomerase, DsbC, N-terminal|Disulphide bond isomerase, DsbC/G, N-terminal|Thioredoxin, conserved site|Thioredoxin-like fold GO:0045454 G3DSA:3.10.450.70|G3DSA:3.40.30.10|PF10411|PF13098|PS00194|SSF52833|SSF54423 ALFP_RS01385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001633|IPR001867|IPR011991|IPR016032 EAL domain|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.20.20.450|PF00486|PF00563|SM00052|SM00862|SSF141868|SSF46894 ALFP_RS01390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004089|IPR004090|IPR033480 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain|Single Cache domain 2 GO:0004871|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF17200|PR00260|SM00283|SM01049|SSF58104 ALFP_RS01395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000801|IPR013783|IPR014756|IPR021764|IPR029058 Alpha/Beta hydrolase fold|Enterochelin esterase, N-terminal|Immunoglobulin E-set|Immunoglobulin-like fold|Putative esterase GO:0005506|GO:0005737|GO:0006826|GO:0008849 G3DSA:2.60.40.10|G3DSA:3.40.50.1820|PF00756|PF11806|SSF53474|SSF81296 ALFP_RS01400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR003560|IPR016040|IPR020904 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0008667|GO:0016491|GO:0019290|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR01397|PS00061|SM00822|SSF51735|TIGR04316 ALFP_RS01405 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000868|IPR016291 Isochorismatase|Isochorismatase-like GO:0003824|GO:0008152|GO:0008908 G3DSA:3.40.50.850|PF00857|PIRSF001111|PR01398|SSF52499 ALFP_RS01410 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004561|IPR005801|IPR015890 ADC synthase|Chorismate-utilising enzyme, C-terminal|Isochorismate synthase GO:0008909|GO:0009058 G3DSA:3.60.120.10|PF00425|SSF56322|TIGR00543 ALFP_RS01415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011048|IPR015943|IPR019405 Cytochrome cd1-nitrite reductase-like, haem d1 domain|Lactonase, 7-bladed beta propeller|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PF10282|SSF50956|SSF51004 ALFP_RS01420 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010290|IPR020846 Major facilitator superfamily domain|Transmembrane secretion effector G3DSA:1.20.1250.20|PF05977|SSF103473 ALFP_RS01425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000873|IPR001031|IPR001242|IPR009081|IPR010071|IPR020806|IPR020845|IPR025110|IPR029058 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Alpha/Beta hydrolase fold|Amino acid adenylation domain|Condensation domain|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain|Thioesterase GO:0003824|GO:0008152|GO:0009058|GO:0016788|GO:0031177 G3DSA:1.10.1200.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.1820|G3DSA:3.40.50.980|PF00501|PF00550|PF00668|PF00975|PF13193|PS00455|SM00823|SSF47336|SSF52777|SSF53474|SSF56801|TIGR01733 ALFP_RS01430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009081 Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|SSF47336 ALFP_RS01435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000873|IPR011963|IPR020845|IPR025110 2,3-dihydroxybenzoate-AMP ligase|AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152|GO:0008668|GO:0019290 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801|TIGR02275 ALFP_RS01440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 G3DSA:3.90.470.20|PF01648|SSF56214 ALFP_RS01445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS01450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 ALFP_RS01455 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS01460 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS01465 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 ALFP_RS01470 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|SM00347|SSF46785 ALFP_RS01475 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS01480 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS01485 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS01490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic G3DSA:3.40.190.10|PF12974|SSF53850 ALFP_RS01495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006108|IPR006176|IPR008927|IPR013328|IPR016040|IPR022694 3-hydroxyacyl-CoA dehydrogenase|3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0003857|GO:0006631|GO:0016491|GO:0055114|GO:0070403 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00725|PF02737|PIRSF000105|SSF48179|SSF51735 ALFP_RS01500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003421|IPR008927|IPR011128|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal|NAD(P)-binding domain|Opine dehydrogenase GO:0016491|GO:0016616|GO:0046168|GO:0050662|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF01210|PF02317|SSF48179|SSF51735 ALFP_RS01505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 ALFP_RS01510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|SSF53807 ALFP_RS01515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS01520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000522|IPR029022 ABC transporter, BtuC-like|ABC transporter, FecCD-like GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|SSF81345 ALFP_RS01525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|SSF53474 ALFP_RS01530 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001650|IPR022192|IPR027417 Helicase, C-terminal|Mitochondrial degradasome RNA helicase subunit, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase GO:0016817 G3DSA:3.40.50.300|PF00271|PF12513|SM00490|SSF52540 ALFP_RS01535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004812|IPR011701|IPR020846 Drug resistance transporter Bcr/CmlA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473|TIGR00710 ALFP_RS01540 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006750 Putative inner membrane exporter, YdcZ PF04657 ALFP_RS01545 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS01550 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006860|IPR012373|IPR032508|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal|Protein FecR, C-terminal PF04773|PF16220|PF16344|PIRSF018266 ALFP_RS01555 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000644|IPR005170|IPR005496|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|Integral membrane protein TerC|Transporter-associated domain GO:0003824|GO:0016021|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|PF03741|SM01091|SSF54631|SSF56176 ALFP_RS01565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003829|IPR008778|IPR011051|IPR012093|IPR014710 Pirin|Pirin, C-terminal domain|Pirin, N-terminal domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF02678|PF05726|PIRSF006232|SSF51182 ALFP_RS01570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 PF04116 ALFP_RS01575 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005804 Fatty acid desaturase domain GO:0006629 PF00487 ALFP_RS01580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013747|IPR013751|IPR016039|IPR016084|IPR028201 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|Haem oxygenase-like, multi-helical|PqqC-like protein|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:1.20.910.10|G3DSA:3.40.47.10|PF08541|PF08545|PF14518|SSF48613|SSF53901 ALFP_RS01590 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|SSF56752 ALFP_RS01595 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS01600 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007349 Domain of unknown function DUF418 PF04235 ALFP_RS01605 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF13977|SSF46689|SSF48498 ALFP_RS01610 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007344 GrpB/Dephospho-CoA kinase G3DSA:3.30.460.10|PF04229|SSF81301 ALFP_RS01615 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|SSF55729 ALFP_RS01620 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002575|IPR011009|IPR024165 Aminoglycoside 3-phosphotransferase|Aminoglycoside phosphotransferase|Protein kinase-like domain GO:0005524|GO:0016773|GO:0046677 G3DSA:3.30.200.20|G3DSA:3.90.1200.10|PF01636|PIRSF000706|SSF56112 ALFP_RS01625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|SSF56529 ALFP_RS01630 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 PF01177 ALFP_RS01635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|SM00903|SSF50475 ALFP_RS01640 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002933|IPR010158|IPR011650 Amidase, carbamoylase-type|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787|GO:0016813 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PIRSF001235|SSF53187|SSF55031|TIGR01879 ALFP_RS01645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 ALFP_RS01650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 ALFP_RS01655 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS01660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS01665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 ALFP_RS01670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS01675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001320|IPR001638 Ionotropic glutamate receptor|Solute-binding protein family 3/N-terminal domain of MltF GO:0004970|GO:0016020 G3DSA:3.40.190.10|PF00497|SM00062|SM00079|SSF53850 ALFP_RS01680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 ALFP_RS01685 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 ALFP_RS01690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 ALFP_RS01695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002220|IPR013785 Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|PR00146|SM01130|SSF51569 ALFP_RS01705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 ALFP_RS01710 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008332|IPR011991|IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylguanine DNA methyltransferase, ribonuclease-like domain|Winged helix-turn-helix DNA-binding domain GO:0003824|GO:0003908|GO:0006281 G3DSA:1.10.10.10|PF01035|PF02870|SSF46767|SSF53155|TIGR00589 ALFP_RS01715 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|SSF53720 ALFP_RS01720 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025737 MetA-pathway of phenol degradation, putative G3DSA:2.40.230.30|PF13557 ALFP_RS01725 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009451|IPR011044|IPR015943 Amine dehydrogenase heavy chain|Quinoprotein amine dehydrogenase, beta chain-like|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0030058|GO:0042597|GO:0055114 G3DSA:2.130.10.10|PF06433|SSF50969 ALFP_RS01730 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 PF07291 ALFP_RS01735 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012336|IPR013478 Methylamine dehydrogenase accessory protein MauD|Thioredoxin-like fold GO:0030416 G3DSA:3.40.30.10|PF13098|SSF52833|TIGR02661 ALFP_RS01740 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013504|IPR016008 Amine dehydrogenase light chain|Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0030058|GO:0042597|GO:0055114 G3DSA:2.60.30.10|PF02975|PIRSF000192|SSF57561 ALFP_RS01745 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|SSF46626 ALFP_RS01750 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR018060|IPR018062|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|PR00032|PS00041|SM00342|SSF46689 ALFP_RS01755 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 ALFP_RS01760 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000257|IPR006361 Uroporphyrinogen decarboxylase (URO-D)|Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 G3DSA:3.20.20.210|MF_00218|PF01208|PS00906|PS00907|SSF51726|TIGR01464 ALFP_RS01765 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001650|IPR005259|IPR011545|IPR014001|IPR027417 DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Primosomal protein N' GO:0003676|GO:0003677|GO:0004003|GO:0005524|GO:0006260|GO:0032508 G3DSA:3.40.50.300|MF_00983|PF00270|PF00271|SM00487|SM00490|SSF52540|TIGR00595 ALFP_RS01770 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005752|IPR013986|IPR014016|IPR014017|IPR027417 ATP-dependent DNA helicase Rep|DExx box DNA helicase domain|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0006268|GO:0016787 G3DSA:1.10.10.160|G3DSA:1.10.486.10|G3DSA:3.40.50.300|MF_01920|PF00580|PF13361|SSF52540 ALFP_RS01780 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 ALFP_RS01785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006005|IPR009051|IPR016040|IPR023753|IPR028261 Alpha-helical ferredoxin|Dihydroprymidine dehydrogenase domain II|FAD/NAD(P)-binding domain|Glutamate synthase, NADH/NADPH, small subunit 1|NAD(P)-binding domain GO:0006537|GO:0016491|GO:0016639|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF07992|PF14691|PR00419|SSF46548|SSF51971|TIGR01317 ALFP_RS01790 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002489|IPR002932|IPR006982|IPR013785|IPR017932|IPR029055 Aldolase-type TIM barrel|Glutamate synthase domain|Glutamate synthase, alpha subunit, C-terminal|Glutamate synthase, central-N|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal GO:0003824|GO:0006537|GO:0006807|GO:0008152|GO:0015930|GO:0016491|GO:0016638|GO:0055114 G3DSA:2.160.20.60|G3DSA:3.20.20.70|G3DSA:3.60.20.10|PF00310|PF01493|PF01645|PF04898|SSF51395|SSF56235|SSF69336 ALFP_RS01795 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 ALFP_RS01800 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004136|IPR013785 Aldolase-type TIM barrel|Nitronate monooxygenase GO:0003824|GO:0018580|GO:0055114 G3DSA:3.20.20.70|PF03060|SSF51412 ALFP_RS01805 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 ALFP_RS01810 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006108|IPR006176|IPR008927|IPR013328|IPR016040 3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0003857|GO:0006631|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00725|PF02737|SSF48179|SSF51735 ALFP_RS01820 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002323|IPR009056 Cytochrome c, class IE|Cytochrome c-like domain GO:0005506|GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PR00607|SSF46626 ALFP_RS01830 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 ALFP_RS01835 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 ALFP_RS01840 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006334|IPR007370 Glutamate--cysteine ligase|Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 MF_00578|PF04262|SSF55931|TIGR01434 ALFP_RS01850 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|PS00622|SM00421|SSF46894 ALFP_RS01855 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000073|IPR008220|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 G3DSA:3.40.50.1820|MF_00296|PF00561|PIRSF000443|SSF53474|TIGR01392 ALFP_RS01860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010743|IPR029063 Methionine biosynthesis MetW|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF07021|SSF53335|TIGR02081 ALFP_RS01865 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS01870 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005115 Uncharacterised domain UPF0126 PF03458 ALFP_RS01875 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007300 CidB/LrgB family PF04172 ALFP_RS01880 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005538 LrgA/CidA family GO:0016021 PF03788 ALFP_RS01885 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 ALFP_RS01890 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 ALFP_RS01895 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009163|IPR011146|IPR019200 ATP adenylyltransferase|ATP adenylyltransferase, C-terminal|HIT-like domain GO:0003824|GO:0003877|GO:0005524|GO:0009117 PF09830|PIRSF000846|SSF54197 ALFP_RS01905 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008640|IPR024973 ESPR domain|Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 PF05658|PF13018|SSF101967 ALFP_RS01910 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001867|IPR011991|IPR016032 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00486|SM00862|SSF46894 ALFP_RS01915 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474 ALFP_RS01925 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PIRSF006324 ALFP_RS01930 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 G3DSA:2.60.120.620|PF13640 ALFP_RS01935 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009000|IPR012947|IPR018163|IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain|Translation protein, beta-barrel domain GO:0000166|GO:0004813|GO:0005524|GO:0006419|GO:0016876|GO:0043039 PF01411|PF07973|SSF50447|SSF55186 ALFP_RS01940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS01945 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003779|IPR029032 AhpD-like|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118 ALFP_RS01950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|SSF53383 ALFP_RS01955 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000281|IPR001347|IPR009057|IPR011991 Helix-turn-helix protein RpiR|Homeodomain-like|Sugar isomerase (SIS)|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005975|GO:0006355|GO:0030246 G3DSA:1.10.10.10|G3DSA:3.40.50.10490|PF01380|PF01418|SSF46689|SSF53697 ALFP_RS01960 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005079 Peptidase C45 PF03417 ALFP_RS01965 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016030|IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type|Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like G3DSA:1.20.1200.10|PD007457|PF01923|SSF89028|TIGR00636 ALFP_RS01970 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 ALFP_RS01975 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021647 Copper binding periplasmic protein CusF PF11604 ALFP_RS01980 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003593|IPR003959|IPR004491|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Heat shock protein HslU|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 G3DSA:1.10.8.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00249|PF00004|PF07724|SM00382|SM01086|SSF52540|TIGR00390 ALFP_RS01985 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001353|IPR022281|IPR029055 ATP-dependent protease, HslV subunit|Nucleophile aminohydrolases, N-terminal|Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0006508|GO:0009376|GO:0051603 G3DSA:3.60.20.10|MF_00248|PF00227|PIRSF039093|SSF56235|TIGR03692 ALFP_RS01990 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000962|IPR012784|IPR020458 RNA polymerase-binding transcription factor DksA|Zinc finger, DksA/TraR C4-type|Zinc finger, DksA/TraR C4-type conserved site GO:0008270 MF_00926|PF01258|PS01102|SSF109635|SSF57716|TIGR02420 ALFP_RS01995 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003495|IPR011629|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|SM00833|SSF52540|SSF90002 ALFP_RS02000 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|SSF46785 ALFP_RS02005 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS02010 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001626|IPR029022 ABC transporter, BtuC-like|ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 PF00950|SSF81345 ALFP_RS02015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006127|IPR006128|IPR006129 Adhesin B|Adhesion lipoprotein|Periplasmic solute binding protein, ZnuA-like GO:0007155|GO:0030001|GO:0046872 G3DSA:3.40.50.1980|PF01297|PR00690|PR00691|SSF53807 ALFP_RS02020 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002104|IPR004107|IPR011010|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01808|PF00589|PF02899|SSF56349 ALFP_RS02025 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007435|IPR029016 GAF domain-like|Protein of unknown function DUF484 G3DSA:3.30.450.40|PF04340|SSF55781 ALFP_RS02030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001653|IPR018510 Diaminopimelate epimerase, DapF|Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 G3DSA:3.10.310.10|MF_00197|PF01678|PS01326|SSF54506|TIGR00652 ALFP_RS02035 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PF03279|PIRSF026649 ALFP_RS02040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PF03279|PIRSF026649 ALFP_RS02045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002133|IPR022628|IPR022629|IPR022630|IPR022631|IPR022636 S-adenosylmethionine synthetase|S-adenosylmethionine synthetase superfamily|S-adenosylmethionine synthetase, C-terminal|S-adenosylmethionine synthetase, N-terminal|S-adenosylmethionine synthetase, central domain|S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0005524|GO:0006556 G3DSA:3.30.300.10|MF_00086|PF00438|PF02772|PF02773|PIRSF000497|PS00376|PS00377|SSF55973|TIGR01034 ALFP_RS02050 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000043|IPR015878|IPR016040|IPR020082 Adenosylhomocysteinase|NAD(P)-binding domain|S-adenosyl-L-homocysteine hydrolase, NAD binding domain|S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 G3DSA:3.40.50.1480|G3DSA:3.40.50.720|MF_00563|PF00670|PF05221|PIRSF001109|PS00738|PS00739|SM00996|SM00997|SSF51735|SSF52283|TIGR00936 ALFP_RS02055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV PF04020 ALFP_RS02060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003171|IPR004620|IPR029041 5,10-methylenetetrahydrofolate reductase|FAD-linked oxidoreductase-like|Methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0006555|GO:0009086|GO:0055114 G3DSA:3.20.20.220|PF02219|SSF51730|TIGR00676 ALFP_RS02065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002698|IPR024185 5-formyltetrahydrofolate cyclo-ligase|5-formyltetrahydrofolate cyclo-ligase-like domain G3DSA:3.40.50.10420|PF01812|SSF100950|TIGR02727 ALFP_RS02070 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008258|IPR008939|IPR012289|IPR016026|IPR023346 Lysozyme-like domain|Lytic transglycosylase, superhelical U-shaped|Lytic transglycosylase, superhelical U-shaped and linker domain|Lytic transglycosylase, superhelical linker|Transglycosylase SLT domain 1 GO:0004553|GO:0042597 G3DSA:1.10.1240.20|G3DSA:1.10.530.10|G3DSA:1.25.20.10|PF01464|PF14718|SSF48435|SSF53955 ALFP_RS02075 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002646|IPR032828 Poly A polymerase, head domain|tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GO:0003723|GO:0006396|GO:0016779 G3DSA:1.10.3090.10|G3DSA:3.30.460.10|PF01743|PF12627|SSF81301|SSF81891 ALFP_RS02080 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003788|IPR029063 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF02636|SSF53335 ALFP_RS02090 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|SSF53335 ALFP_RS02095 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 ALFP_RS02100 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015813|IPR018129|IPR021135|IPR022805|IPR033129 Phosphoenolpyruvate carboxylase|Phosphoenolpyruvate carboxylase, His active site|Phosphoenolpyruvate carboxylase, Lys active site|Phosphoenolpyruvate carboxylase, bacterial/plant-type|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0006099|GO:0008964|GO:0015977 G3DSA:1.20.1440.90|MF_00595|PF00311|PR00150|PS00393|PS00781|SSF51621 ALFP_RS02105 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000581|IPR004404|IPR015928|IPR020558 Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0004160|GO:0008152|GO:0009082 MF_00012|PF00920|PS00886|PS00887|SSF143975|SSF52016|TIGR00110 ALFP_RS02110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003694|IPR014729|IPR022310|IPR022926 NAD(+) synthetase|NAD/GMP synthase|NH(3)-dependent NAD(+) synthetase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003952|GO:0005524|GO:0008795|GO:0009435 G3DSA:3.40.50.620|MF_00193|PF02540|SSF52402|TIGR00552 ALFP_RS02115 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 ALFP_RS02120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00073|SSF47203|SSF56645 ALFP_RS02125 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 ALFP_RS02130 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS02135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 ALFP_RS02140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002549 Transmembrane protein TqsA-like PF01594 ALFP_RS02150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|SSF56349 ALFP_RS02160 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|SSF56281 ALFP_RS02180 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF13730 ALFP_RS02185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic PD031251 ALFP_RS02200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 ALFP_RS02205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR014147|IPR023220 Type IV conjugative transfer protein TrbJ|Type IV secretion system, VirB5-domain SSF101082|TIGR02780 ALFP_RS02210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR027584 Entry exclusion lipoprotein TrbK TIGR04359 ALFP_RS02215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007688|IPR014150 Conjugal transfer, TrbL|Plasmid conjugal transfer TrbL/VirB6 GO:0030255 PF04610|TIGR02783 ALFP_RS02230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025159 Transcriptional regulator, AbiEi antitoxin PF13338 ALFP_RS02235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003812|IPR025230 Domain of unknown function DUF4172|Fido domain G3DSA:1.10.3290.10|PF02661|PF13776|SSF140931 ALFP_RS02240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000330|IPR001650|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|SNF2-related, N-terminal domain GO:0005524 G3DSA:3.40.50.300|PF00176|PF00271|SM00487|SM00490|SSF52540 ALFP_RS02245 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025503 Protein of unknown function DUF4391 PF14335 ALFP_RS02250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic PF13289 ALFP_RS02255 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002789|IPR027417 Helicase HerA, central domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01935|SSF52540 ALFP_RS02260 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002052|IPR002295|IPR002941|IPR029063 DNA methylase N-4/N-6|DNA methylase, N-6 adenine-specific, conserved site|N6 adenine-specific DNA methyltransferase, D21 class|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF01555|PIRSF015855|PR00506|PS00092|SSF53335 ALFP_RS02265 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009362 Protein of unknown function DUF1016 PF06250 ALFP_RS02270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006935|IPR027417 Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016787 G3DSA:3.40.50.300|PF04851|SSF52540 ALFP_RS02275 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 ALFP_RS02280 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023614 Porin domain G3DSA:2.40.160.10|PF13609|SSF56935 ALFP_RS02285 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015590|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00687|SSF53720 ALFP_RS02290 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025737 MetA-pathway of phenol degradation, putative PF13557 ALFP_RS02295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SM00822|SSF51735 ALFP_RS02300 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR018060|IPR018062 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|PS00041|SM00342|SSF46689 ALFP_RS02305 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 ALFP_RS02310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 ALFP_RS02315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000486|IPR004360|IPR029068 Extradiol ring-cleavage dioxygenase, class I /II|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0003824|GO:0006725|GO:0008198|GO:0055114 G3DSA:3.10.180.10|PF00903|PS00082|SSF54593 ALFP_RS02320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 ALFP_RS02325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|PF13279|SSF54637 ALFP_RS02330 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905 ALFP_RS02335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|PS00217|SSF103473 ALFP_RS02340 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015927|IPR018647|IPR027417|IPR028360 Domain of unknown function DUF2075|P-loop containing nucleoside triphosphate hydrolase|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B/S26C G3DSA:2.10.109.10|G3DSA:3.40.50.300|PF09848|SSF51306|SSF52540 ALFP_RS02345 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018170|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase, conserved site|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PIRSF000097|PR00069|PS00062|PS00798|SSF51430 ALFP_RS02350 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001958|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01035|SSF103473 ALFP_RS02355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS02360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003370|IPR014047 Chromate transporter|Chromate transporter, long chain GO:0015109|GO:0015703 PF02417|PIRSF004810|TIGR00937 ALFP_RS02365 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009078|IPR010287|IPR012347 Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF05974|SSF47240 ALFP_RS02375 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|SSF53649 ALFP_RS02380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS02385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|SM00347|SSF46785 ALFP_RS02390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR001221|IPR001433|IPR001709|IPR006058|IPR008333|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00371|PR00410|PS00197|SSF52343|SSF54292|SSF63380 ALFP_RS02395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 ALFP_RS02400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010105|IPR010917|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|SSF56935|TIGR01783 ALFP_RS02405 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|SSF53807 ALFP_RS02410 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS02415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000522|IPR029022 ABC transporter, BtuC-like|ABC transporter, FecCD-like GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|SSF81345 ALFP_RS02420 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000522|IPR029022 ABC transporter, BtuC-like|ABC transporter, FecCD-like GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|SSF81345 ALFP_RS02425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 ALFP_RS02430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 ALFP_RS02435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006094|IPR012256|IPR015409|IPR016164|IPR016166|IPR016167|IPR016169|IPR016172|IPR016173 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|D-lactate dehydrogenase|D-lactate dehydrogenase, C-terminal subdomain 1|D-lactate dehydrogenase, C-terminal subdomain 2|D-lactate dehydrogenase, membrane binding, C-terminal|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase-like, C-terminal GO:0003824|GO:0004457|GO:0005887|GO:0006089|GO:0016491|GO:0016614|GO:0050660|GO:0051287|GO:0055085|GO:0055114 G3DSA:3.30.1370.20|G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.30.70.610|PF01565|PF09330|PIRSF000101|SSF55103|SSF56176 ALFP_RS02440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000262|IPR008259|IPR012133|IPR013785|IPR020920 Aldolase-type TIM barrel|Alpha-hydroxy acid dehydrogenase, FMN-dependent|FMN-dependent alpha-hydroxy acid dehydrogenase, active site|FMN-dependent dehydrogenase|L-lactate dehydrogenase, bacterial GO:0003824|GO:0004457|GO:0006089|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|MF_01559|PF01070|PIRSF000138|PS00557|SSF51395 ALFP_RS02445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 ALFP_RS02450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PF02652|TIGR00795 ALFP_RS02455 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009057|IPR015893 Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|SSF46689 ALFP_RS02460 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023393 START-like domain G3DSA:3.30.530.20 ALFP_RS02465 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR011663|IPR011991|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|SM00345|SM00866|SSF46785|SSF64288 ALFP_RS02470 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PS00519|SM00344|SSF46785|SSF54909 ALFP_RS02475 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000192|IPR010111|IPR015421|IPR015422|IPR015424 Aminotransferase class V domain|Kynureninase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01970|PF00266|PIRSF038800|SSF53383|TIGR01814 ALFP_RS02480 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002293|IPR004840|IPR004841 Amino acid permease, conserved site|Amino acid permease/ SLC12A domain|Amino acid/polyamine transporter I GO:0003333|GO:0006810|GO:0006865|GO:0015171|GO:0016020|GO:0016021|GO:0055085 PF00324|PIRSF006060|PS00218 ALFP_RS02490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009057|IPR015893 Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|SSF46689 ALFP_RS02495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|SSF52833 ALFP_RS02500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002823 Protein of unknown function DUF112, transmembrane PF01970 ALFP_RS02505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009936 Protein of unknown function DUF1468 PF07331 ALFP_RS02510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS02515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001034|IPR011991|IPR014036|IPR018356 DeoR C-terminal sensor domain|DeoR-type HTH domain|Transcription regulator, HTH DeoR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.750.70|PF00455|PF08220|PR00037|PS00894|SM00420|SM01134|SSF100950|SSF46785 ALFP_RS02520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 ALFP_RS02525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic G3DSA:3.40.190.10|PF13416|SSF53850 ALFP_RS02530 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS02535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS02540 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004843|IPR026575|IPR029052 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA|Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0004115|GO:0016787 G3DSA:3.60.21.10|MF_00905|PF00149|SSF56300 ALFP_RS02545 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010105|IPR010917|IPR011662|IPR012910 Secretin/TonB, short N-terminal domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07660|PF07715|PS01156|SM00965|SSF56935|TIGR01783 ALFP_RS02550 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006860|IPR012373|IPR032508|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal|Protein FecR, C-terminal PF04773|PF16220|PF16344|PIRSF018266 ALFP_RS02555 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 ALFP_RS02560 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005496|IPR022301 Integral membrane protein TerC|Integral membrane protein YjbE GO:0016021 PF03741|TIGR03717 ALFP_RS02565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site G3DSA:3.10.50.40|PF13616|PS01096|SSF54534 ALFP_RS02570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010985 Ribbon-helix-helix GO:0006355 SSF47598 ALFP_RS02575 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003791 Protein of unknown function UPF0178 MF_00489|PF02639 ALFP_RS02580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011394|IPR025984 MazG-like domain|NTP Pyrophosphohydrolase MazG-related, RS21-C6 G3DSA:1.10.287.1080|PF12643|PIRSF029826|SSF101386 ALFP_RS02585 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003607|IPR006674 HD domain|HD/PDEase domain G3DSA:1.10.3210.10|PF01966|SM00471|SSF109604 ALFP_RS02590 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|SSF53850 ALFP_RS02595 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013341|IPR013342|IPR018110|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal domain|Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF02746|PF13378|PS00908|SM00922|SSF51604|SSF54826 ALFP_RS02600 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002942|IPR025708 Heat shock protein 15|RNA-binding S4 domain GO:0003677|GO:0003723|GO:0003727|GO:0034605|GO:0043023 G3DSA:3.10.290.10|PF01479|PIRSF016821|SM00363|SSF55174 ALFP_RS02605 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004638|IPR011701|IPR020846 Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473|TIGR00711 ALFP_RS02610 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 ALFP_RS02615 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013112|IPR013130|IPR017938 FAD-binding 8|Ferric reductase transmembrane component-like domain|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF01794|PF08022|SSF52343|SSF63380 ALFP_RS02620 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023631 Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304 ALFP_RS02625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS02630 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS02635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009057|IPR018060|IPR032783 AraC-type transcription regulator, ligand-binding domain|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF12852|SM00342|SSF46689 ALFP_RS02640 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118|TIGR00778 ALFP_RS02645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011008|IPR014910 Dimeric alpha-beta barrel|Putative monooxygenase YdhR PF08803|SSF54909 ALFP_RS02650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS02655 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001404|IPR003594|IPR019805|IPR020568|IPR020575 Heat shock protein Hsp90 family|Heat shock protein Hsp90, N-terminal|Heat shock protein Hsp90, conserved site|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold GO:0005524|GO:0006457|GO:0006950|GO:0051082 G3DSA:3.30.565.10|MF_00505|PF00183|PF02518|PIRSF002583|PR00775|PS00298|SM00387|SSF110942|SSF54211|SSF55874 ALFP_RS02660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935|TIGR01783 ALFP_RS02665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005123|IPR006620|IPR023550 Oxoglutarate/iron-dependent dioxygenase|PKHD-type hydroxylase|Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016491|GO:0016705|GO:0016706|GO:0031418|GO:0055114 MF_00657|PF13640|SM00702|SSF51197 ALFP_RS02670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000262|IPR012133|IPR013785 Aldolase-type TIM barrel|Alpha-hydroxy acid dehydrogenase, FMN-dependent|FMN-dependent dehydrogenase GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF01070|PIRSF000138|SSF51395 ALFP_RS02675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 G3DSA:3.40.80.10|PF01510|SM00644|SSF55846 ALFP_RS02685 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PF01578 ALFP_RS02690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000897|IPR003593|IPR004125|IPR004780|IPR013822|IPR022941|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle protein Ffh|Signal recognition particle, SRP54 subunit|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, M-domain|Signal recognition particle, SRP54 subunit, helical bundle GO:0003924|GO:0005525|GO:0006614|GO:0008312|GO:0048500 G3DSA:1.10.260.30|G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00306|PF00448|PF02881|PF02978|PS00300|SM00382|SM00962|SM00963|SSF47446|SSF52540|TIGR00959 ALFP_RS02695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007055|IPR018392 BON domain|LysM domain G3DSA:3.10.350.10|PF01476|PF04972|SM00257|SSF54106 ALFP_RS02700 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003749|IPR010035|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiS, thiamine-biosynthesis|ThiamineS/Molybdopterin converting factor subunit 1 G3DSA:3.10.20.30|PF02597|SSF54285|TIGR01683 ALFP_RS02705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000073|IPR002410|IPR005944|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Peptidase S33|Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508|GO:0008233 G3DSA:3.40.50.1820|PF00561|PIRSF006431|PR00793|SSF53474|TIGR01249 ALFP_RS02710 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003358|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 G3DSA:3.40.50.150|MF_01057|PF02390|SSF53335|TIGR00091 ALFP_RS02720 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 ALFP_RS02730 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002763 Protein of unknown function DUF72 G3DSA:3.20.20.410|PF01904|SSF117396 ALFP_RS02735 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 ALFP_RS02740 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR018060|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|PR00032|SM00342|SSF46689 ALFP_RS02750 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 ALFP_RS02755 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|SSF51735 ALFP_RS02760 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS02765 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 PF01699 ALFP_RS02770 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR009057|IPR011006|IPR018060|IPR018062|IPR020449 CheY-like superfamily|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Signal transduction response regulator, receiver domain|Transcription regulator HTH, AraC- type GO:0000160|GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.2300|PF00072|PF12833|PR00032|PS00041|SM00342|SM00448|SSF46689|SSF52172 ALFP_RS02775 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001853|IPR012336|IPR014440 DSBA-like thioredoxin domain|HCCA isomerase/glutathione S-transferase kappa|Thioredoxin-like fold GO:0015035 G3DSA:3.40.30.10|PF01323|PIRSF006386|SSF52833 ALFP_RS02780 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005828|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|SSF103473 ALFP_RS02785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|SM01007|SSF53639 ALFP_RS02790 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR014871|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain|dUTPase/dCTP pyrophosphatase GO:0008080 G3DSA:1.10.287.1080|G3DSA:3.40.630.30|PF08761|PF13302|SSF101386|SSF55729 ALFP_RS02800 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002125|IPR016192|IPR016193 APOBEC/CMP deaminase, zinc-binding|Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like GO:0003824|GO:0008270|GO:0016787 G3DSA:3.40.140.10|PF00383|PS00903|SSF53927 ALFP_RS02805 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011051|IPR013096|IPR014710|IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein|Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182|TIGR03214 ALFP_RS02810 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS02815 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002524|IPR027469|IPR027470 Cation efflux protein|Cation efflux protein transmembrane domain|Cation efflux protein, cytoplasmic domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|G3DSA:3.30.70.1350|PF01545|PF16916|SSF160240|SSF161111|TIGR01297 ALFP_RS02820 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001412|IPR002547|IPR004495|IPR009080|IPR012340|IPR014729|IPR014758|IPR015413|IPR023458|IPR029038 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Methionine-tRNA ligase, type 1|Methionyl-tRNA synthetase|Methionyl-tRNA synthetase, Zn-domain|Methionyl-tRNA synthetase, beta subunit, C-terminal|Methionyl/Leucyl tRNA synthetase|Nucleic acid-binding, OB-fold|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-binding domain GO:0000049|GO:0000166|GO:0004812|GO:0004825|GO:0005524|GO:0005737|GO:0006418|GO:0006431 G3DSA:1.10.730.10|G3DSA:2.20.28.20|G3DSA:2.40.50.140|G3DSA:3.40.50.620|MF_00098|PF01588|PF09334|PR01041|PS00178|SSF47323|SSF50249|SSF52374|SSF57770|TIGR00398|TIGR00399 ALFP_RS02830 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000808|IPR002744|IPR019591|IPR027417 Domain of unknown function DUF59|Mrp, conserved site|Mrp/NBP35 ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|MF_02040|PF01883|PF10609|PS01215|SSF117916|SSF52540 ALFP_RS02835 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000184 Bacterial surface antigen (D15) GO:0019867 G3DSA:2.40.160.50|PF01103 ALFP_RS02840 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007452 Translocation and assembly module TamB PF04357 ALFP_RS02845 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008180|IPR011962|IPR029054 Deoxycytidine triphosphate deaminase|Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase|dUTPase-like GO:0006229|GO:0008829|GO:0016787|GO:0046080 G3DSA:2.70.40.10|MF_00146|PF00692|SSF51283|TIGR02274 ALFP_RS02850 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000310|IPR005308|IPR008286|IPR011193|IPR015421|IPR015422|IPR015424 Orn/Lys/Arg decarboxylase, C-terminal|Orn/Lys/Arg decarboxylase, N-terminal|Orn/Lys/Arg decarboxylase, major domain|Ornithine/lysine/arginine decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0005737|GO:0006520|GO:0016831 G3DSA:3.40.640.10|G3DSA:3.90.100.10|G3DSA:3.90.1150.10|PF01276|PF03709|PF03711|PIRSF009393|PS00703|SSF53383|SSF55904 ALFP_RS02855 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004792|IPR023166|IPR023753 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like|FAD/NAD(P)-binding domain|HI0933 insert-like domain GO:0016491|GO:0055114 G3DSA:1.10.8.260|G3DSA:2.40.30.10|G3DSA:3.50.50.60|PF03486|PR00368|PR00411|SSF160996|SSF51905|TIGR00275 ALFP_RS02860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002930|IPR003016|IPR011053|IPR017453 2-oxo acid dehydrogenase, lipoyl-binding site|Glycine cleavage system H-protein|Glycine cleavage system H-protein, subgroup|Single hybrid motif GO:0005960|GO:0019464 G3DSA:2.40.50.100|MF_00272|PF01597|PS00189|SSF51230|TIGR00527 ALFP_RS02865 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001796|IPR012259|IPR017925|IPR024072 Dihydrofolate reductase|Dihydrofolate reductase conserved site|Dihydrofolate reductase domain|Dihydrofolate reductase-like domain GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 G3DSA:3.40.430.10|PF00186|PIRSF000194|PR00070|PS00075|SSF53597 ALFP_RS02870 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000398|IPR020940|IPR023451 Thymidylate synthase|Thymidylate synthase, active site|Thymidylate synthase/dCMP hydroxymethylase domain GO:0004799|GO:0006231 G3DSA:3.30.572.10|MF_00008|PF00303|PR00108|PS00091|SSF55831|TIGR03284 ALFP_RS02875 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003718|IPR015946 K homology domain-like, alpha/beta|OsmC/Ohr family G3DSA:2.20.25.10|G3DSA:3.30.300.20|PF02566|SSF82784 ALFP_RS02880 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000883|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 G3DSA:1.20.210.10|PF00115|SSF81442 ALFP_RS02885 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003468|IPR009056 Cytochrome c oxidase, monohaem subunit/FixO|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF02433|SSF46626 ALFP_RS02890 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008168|IPR009056 Cytochrome c, class IC|Cytochrome c-like domain GO:0005506|GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PR00605|SSF46626 ALFP_RS02895 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003782|IPR012336 Copper chaperone SCO1/SenC|Thioredoxin-like fold G3DSA:3.40.30.10|PF02630|SSF52833 ALFP_RS02905 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009078|IPR011566|IPR012347 Ferritin-like superfamily|Ferritin-related|Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 G3DSA:1.20.1260.10|MF_01658|PF03232|SSF47240 ALFP_RS02910 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001697|IPR011037|IPR015793|IPR015794|IPR015795|IPR015806|IPR015813|IPR018209 Pyruvate kinase|Pyruvate kinase, C-terminal|Pyruvate kinase, active site|Pyruvate kinase, alpha/beta|Pyruvate kinase, barrel|Pyruvate kinase, beta-barrel insert domain|Pyruvate kinase-like, insert domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955 G3DSA:2.40.33.10|G3DSA:3.20.20.60|G3DSA:3.40.1380.20|PF00224|PF02887|PR01050|PS00110|SSF50800|SSF51621|SSF52935|TIGR01064 ALFP_RS02915 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005624 Haem-degrading PF03928|SSF143744 ALFP_RS02920 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007835|IPR025286 MOFRL domain|MOFRL-associated domain G3DSA:3.40.1480.10|G3DSA:3.40.50.10180|PF05161|PF13660|SSF82544 ALFP_RS02925 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002204|IPR006115|IPR006398|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 2-hydroxy-3-oxopropionate reductase|3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0008679|GO:0016491|GO:0046487|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PS00895|SSF48179|SSF51735|TIGR01505 ALFP_RS02930 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013022|IPR017643|IPR026040 Hydroxypyruvate isomerase|Hydroxypyruvate isomerase-like|Xylose isomerase-like, TIM barrel domain G3DSA:3.20.20.150|PF01261|PIRSF006241|SSF51658|TIGR03234 ALFP_RS02935 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006397|IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|Glyoxylate carboligase|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0009028|GO:0009436|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|SSF52467|SSF52518|TIGR01504 ALFP_RS02940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS02945 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 G3DSA:2.40.230.20|SSF111364 ALFP_RS02950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006042|IPR006043|IPR017588 Uric acid permease UacT-like|Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0055085 PF00860|TIGR00801|TIGR03173 ALFP_RS02955 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004370|IPR014347 4-oxalocrotonate tautomerase|Tautomerase/MIF superfamily GO:0006725|GO:0016853 G3DSA:3.30.429.20|PF01361|SSF55331 ALFP_RS02960 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|SM01007|SSF53639 ALFP_RS02965 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007247|IPR011051|IPR023525|IPR024060 RmlC-like cupin domain|Ureidoglycolate lyase|Ureidoglycolate lyase domain|Ureidoglycolate lyase, bacterial GO:0000256|GO:0004848|GO:0050385 G3DSA:2.60.120.480|MF_00616|PF04115|PIRSF017306|SSF51182 ALFP_RS02970 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017580|IPR018020 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1|Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase GO:0019428 G3DSA:1.10.3330.10|PF09349|SSF158694|TIGR03164 ALFP_RS02975 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS02980 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 PF00953 ALFP_RS02985 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028359 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0016616|GO:0016628|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500136|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 ALFP_RS02990 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001509|IPR008089|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|Nucleotide sugar epimerase GO:0003824|GO:0005975|GO:0016857|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PR01713|SSF51735 ALFP_RS02995 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004268 Peptidoglycan biosynthesis protein MurJ PF03023 ALFP_RS03000 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 ALFP_RS03005 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 ALFP_RS03010 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PF13477|SSF53756 ALFP_RS03015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055|IPR016066 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site GO:0000287|GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|SSF53738|SSF55957 ALFP_RS03020 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|SSF55103|SSF56176 ALFP_RS03025 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|SSF48317 ALFP_RS03030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005959|IPR011234|IPR015377 Fumarylacetoacetase|Fumarylacetoacetase, C-terminal-related|Fumarylacetoacetase, N-terminal GO:0003824|GO:0004334|GO:0008152|GO:0009072 G3DSA:2.30.30.230|G3DSA:3.90.850.10|PF01557|PF09298|SSF56529|SSF63433|TIGR01266 ALFP_RS03035 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005708|IPR011051|IPR014710|IPR022950 Homogentisate 1,2-dioxygenase|Homogentisate 1,2-dioxygenase, bacterial|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0004411|GO:0006559|GO:0006570|GO:0006572|GO:0055114 G3DSA:2.60.120.10|MF_00334|PF04209|SSF51182|TIGR01015 ALFP_RS03040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021233 Protein of unknown function DUF2783 PF10932 ALFP_RS03045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01494|PR00420|SSF51905 ALFP_RS03050 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 ALFP_RS03055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010663|IPR010979|IPR012319|IPR015886|IPR020629 DNA glycosylase/AP lyase, H2TH DNA-binding|Formamidopyrimidine-DNA glycosylase|Formamidopyrimidine-DNA glycosylase, catalytic domain|Ribosomal protein S13-like, H2TH|Zinc finger, FPG/IleRS-type GO:0003676|GO:0003684|GO:0003906|GO:0006281|GO:0006284|GO:0006289|GO:0008270|GO:0008534|GO:0016799 G3DSA:1.10.8.50|G3DSA:3.20.190.10|MF_00103|PF01149|PF06827|PF06831|SM00898|SM01232|SSF46946|SSF57716|SSF81624|TIGR00577 ALFP_RS03060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011717|IPR011990|IPR019734 Tetratricopeptide TPR-4|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515|GO:0042802 G3DSA:1.25.40.10|PF07721|PF13432|PF14559|SM00028|SSF48452 ALFP_RS03065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004565|IPR029046 Lipoprotein localisation LolA/LolB/LppX|Outer membrane lipoprotein LolB GO:0009279|GO:0015031 G3DSA:2.50.20.10|PF03550|SSF89392 ALFP_RS03070 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004424|IPR006204|IPR013750|IPR014721|IPR020568 4-diphosphocytidyl-2C-methyl-D-erythritol kinase|GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0016114|GO:0050515 G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00061|PF00288|PF08544|PIRSF010376|SSF54211|SSF55060|TIGR00154 ALFP_RS03080 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000842|IPR005946|IPR029057|IPR029099 Phosphoribosyl pyrophosphate synthetase, conserved site|Phosphoribosyltransferase-like|Ribose-phosphate diphosphokinase|Ribose-phosphate pyrophosphokinase, N-terminal domain GO:0000287|GO:0004749|GO:0009156|GO:0009165|GO:0044249 G3DSA:3.40.50.2020|MF_00583_B|PF13793|PF14572|PS00114|SM01400|SSF53271|TIGR01251 ALFP_RS03085 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001021|IPR011035|IPR020055|IPR020056|IPR020057|IPR029751 Ribosomal protein L25|Ribosomal protein L25, beta domain|Ribosomal protein L25, long-form|Ribosomal protein L25, short-form|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain GO:0003735|GO:0005840|GO:0006412|GO:0008097 G3DSA:2.170.120.20|G3DSA:2.40.240.10|MF_01334|MF_01336|PD012503|PF01386|PF14693|SSF50715|TIGR00731 ALFP_RS03090 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001328|IPR018171 Peptidyl-tRNA hydrolase|Peptidyl-tRNA hydrolase, conserved site GO:0004045 G3DSA:3.40.50.1470|MF_00083|PF01195|PS01195|PS01196|SSF53178|TIGR00447 ALFP_RS03095 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003675 CAAX amino terminal protease GO:0016020 PF02517 ALFP_RS03100 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004396|IPR006073|IPR012675|IPR012676|IPR013029|IPR023192|IPR027417 Beta-grasp domain|Domain of unknown function DUF933|GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|Ribosome-binding ATPase YchF/Obg-like ATPase 1|TGS-like|TGS-like domain GO:0005525 G3DSA:1.10.150.300|G3DSA:3.10.20.30|G3DSA:3.40.50.300|MF_00944|PF01926|PF06071|PIRSF006641|PR00326|SSF52540|SSF81271|TIGR00092 ALFP_RS03110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 ALFP_RS03115 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR011051|IPR014710|IPR018060|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF02311|PF12833|PR00032|SM00342|SSF46689|SSF51182 ALFP_RS03120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS03125 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR024172|IPR025184 Domain of unknown function DUF4111|Streptomycin 3''-adenylyltransferase GO:0009012|GO:0046677 G3DSA:3.30.460.10|PF13427|PIRSF000819|SSF81301 ALFP_RS03130 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS03135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001853|IPR012336|IPR023169 DSBA-like thioredoxin domain|Thioredoxin-like fold|UPF0413, central domain GO:0015035 G3DSA:1.10.472.60|G3DSA:3.40.30.10|PF01323|SSF52833 ALFP_RS03140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001087|IPR005546|IPR006315|IPR013830|IPR017186 Autotransporter beta-domain|GDSL lipase/esterase|Lipase, autotransporter EstA|Outer membrane autotransporter barrel|SGNH hydrolase-type esterase domain GO:0016788|GO:0019867 G3DSA:2.40.128.130|G3DSA:3.40.50.1110|PF00657|PF03797|PIRSF037375|SM00869|SSF103515|SSF52266|TIGR01414 ALFP_RS03145 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001765|IPR015892 Carbonic anhydrase|Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 G3DSA:3.40.1050.10|PF00484|PS00704|PS00705|SM00947|SSF53056 ALFP_RS03150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS03155 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007247|IPR011051|IPR024060 RmlC-like cupin domain|Ureidoglycolate lyase|Ureidoglycolate lyase domain GO:0000256|GO:0004848|GO:0050385 G3DSA:2.60.120.480|PF04115|SSF51182 ALFP_RS03160 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR005895|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, haem export, CcmA|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0016887|GO:0017004|GO:0030288 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR01189 ALFP_RS03165 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003544|IPR026031 Cytochrome c-type biogenesis protein CcmB|Cytochrome c-type biogenesis protein CcmB, bacteria GO:0015232|GO:0015886|GO:0016020|GO:0017004 PF03379|PIRSF002764|PR01414|TIGR01190 ALFP_RS03170 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002541|IPR003557 Cytochrome c assembly protein|Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004|GO:0020037 PF01578|PR01386|TIGR01191 ALFP_RS03175 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PF04995|TIGR03141 ALFP_RS03180 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004329|IPR012340 CcmE/CycJ protein|Nucleic acid-binding, OB-fold GO:0005886|GO:0017003|GO:0017004 G3DSA:2.40.50.140|MF_01959|PF03100|SSF82093 ALFP_RS03185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002541|IPR003567|IPR003568|IPR032523 Cytochrome c assembly protein|Cytochrome c-type biogenesis protein|Cytochrome c-type biogenesis protein CcmF|Cytochrome c-type biogenesis protein CcmF, C-terminal GO:0015232|GO:0015886|GO:0016020|GO:0017004|GO:0020037 PF01578|PF16327|PR01410|PR01411|TIGR00353 ALFP_RS03190 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004799|IPR012336|IPR013740 Periplasmic protein thiol:disulphide oxidoreductase DsbE|Redoxin|Thioredoxin-like fold GO:0015036|GO:0016491|GO:0017004|GO:0030288 G3DSA:3.40.30.10|PF08534|SSF52833|TIGR00385 ALFP_RS03195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005616 CcmH/CycL/Ccl2/NrfF family PF03918 ALFP_RS03200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011990|IPR017560|IPR019734 Cytochrome c-type biogenesis protein CcmI|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|SM00028|SSF48452|TIGR03142 ALFP_RS03205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PF02683 ALFP_RS03210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SM00822|SSF51735 ALFP_RS03215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001497|IPR004026|IPR008332|IPR009057|IPR011991|IPR014048|IPR016221|IPR018060 Ada DNA repair, metal-binding|Bifunctional regulatory protein Ada|DNA binding HTH domain, AraC-type|Homeodomain-like|Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Methylguanine DNA methyltransferase, ribonuclease-like domain|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0003824|GO:0003908|GO:0006281|GO:0006355|GO:0008168|GO:0008270|GO:0043565 G3DSA:1.10.10.10|G3DSA:1.10.10.60|G3DSA:3.30.160.70|G3DSA:3.40.10.10|PF01035|PF02805|PF12833|PIRSF000409|PS00374|SM00342|SSF46689|SSF46767|SSF53155|SSF57884|TIGR00589 ALFP_RS03220 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 G3DSA:3.30.70.100|PF00403|SSF55008 ALFP_RS03225 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 G3DSA:3.40.1420.10|PF08816|SSF89872 ALFP_RS03230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 ALFP_RS03235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS03240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS03245 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 ALFP_RS03250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS03255 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004852|IPR009056|IPR026259 Cytochrome c-like domain|Di-c-type haem protein, MauG/cytochrome c peroxidase|Di-haem cytochrome c peroxidase GO:0009055|GO:0016491|GO:0020037|GO:0055114 G3DSA:1.10.760.10|PF00034|PF03150|PIRSF000294|SSF46626 ALFP_RS03260 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006139|IPR006140|IPR016040|IPR029752|IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PS00670|PS00671|SSF51735|SSF52283|SSF55021 ALFP_RS03265 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000944|IPR011991 Transcription regulator Rrf2-type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|SSF46785|TIGR00738 ALFP_RS03270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001486|IPR009050|IPR012292 Globin-like|Globin/Protoglobin|Truncated hemoglobin GO:0019825|GO:0020037 G3DSA:1.10.490.10|PF01152|SSF46458 ALFP_RS03275 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 ALFP_RS03280 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic PF13231 ALFP_RS03285 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 PF04138 ALFP_RS03290 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002509|IPR006879|IPR011330 Chitooligosaccharide deacetylase ChbG-like|Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF04794|SSF88713 ALFP_RS03295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13420|SSF55729 ALFP_RS03300 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005939|IPR029021 Beta-lactamase hydrolase-like|Protein-tyrosine phosphatase-like GO:0016787 G3DSA:3.90.190.10|PF04273|TIGR01244 ALFP_RS03305 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PIRSF006276|PR01438|SSF52402 ALFP_RS03310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021074 Formate dehydrogenase, delta subunit PF11390 ALFP_RS03315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003786|IPR016193 Cytidine deaminase-like|Protein FdhD GO:0003824|GO:0016783 G3DSA:3.10.20.10|G3DSA:3.40.140.10|MF_00187|PF02634|PIRSF015626|SSF53927|TIGR00129 ALFP_RS03320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR006478|IPR006656|IPR006657|IPR006963|IPR009010|IPR012675|IPR017896|IPR017900|IPR019574 2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Aspartate decarboxylase-like domain|Beta-grasp domain|Formate dehydrogenase, alpha subunit|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0008863|GO:0009055|GO:0015942|GO:0016491|GO:0030151|GO:0051536|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.10.20.30|G3DSA:3.30.70.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PF10588|PF12838|PF13510|PIRSF036643|PS00198|SM00926|SM00929|SSF50692|SSF53706|SSF54292|SSF54862|TIGR01591 ALFP_RS03325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001949|IPR011538|IPR012336|IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain|NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site|Thioredoxin-like fold GO:0008137|GO:0010181|GO:0051539|GO:0055114 G3DSA:3.40.30.10|PF01512|PF10589|PS00645|SM00928|SSF140490|SSF142019|SSF142984|SSF52833 ALFP_RS03330 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002023|IPR012336 NADH-quinone oxidoreductase subunit E-like|Thioredoxin-like fold GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF01257|PIRSF000216|SSF52833 ALFP_RS03335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR011991|IPR024370 PBP domain|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF12727|SSF46785|SSF53850 ALFP_RS03340 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000385|IPR006638|IPR007197|IPR010505|IPR013483|IPR013785 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|MoaA/nifB/pqqE, iron-sulphur binding, conserved site|Molybdenum cofactor biosynthesis protein A|Molybdenum cofactor synthesis C-terminal|Radical SAM GO:0003824|GO:0006777|GO:0019008|GO:0046872|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_01225_B|PF04055|PF06463|PF13353|PS01305|SM00729|SSF102114|TIGR02666 ALFP_RS03345 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013482|IPR025877|IPR029044 MobA-like NTP transferase|Molybdenum cofactor guanylyltransferase|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0006777 G3DSA:3.90.550.10|MF_00316|PF12804|SSF53448|TIGR02665 ALFP_RS03350 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001453|IPR005110|IPR005111|IPR008284 MoaB/Mog domain|MoeA, C-terminal, domain IV|MoeA, N-terminal and linker domain|Molybdenum cofactor biosynthesis, conserved site GO:0006777|GO:0032324 G3DSA:2.170.190.11|G3DSA:2.40.340.10|G3DSA:3.40.980.10|G3DSA:3.90.105.10|PF00994|PF03453|PF03454|PS01079|SM00852|SSF53218|SSF63867|SSF63882|TIGR00177 ALFP_RS03355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001453|IPR012245|IPR013484 MoaB/Mog domain|Molybdenum cofactor biosynthesis protein B, proteobacteria|Molybdenum cofactor biosynthesis protein MoaB GO:0006777 G3DSA:3.40.980.10|PF00994|PIRSF006443|SM00852|SSF53218|TIGR00177|TIGR02667 ALFP_RS03360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 G3DSA:3.90.1170.40|PF02391|SSF54690 ALFP_RS03365 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003749|IPR010034|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin converting factor, subunit 1|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiamineS/Molybdopterin converting factor subunit 1 GO:0006777 G3DSA:3.10.20.30|PF02597|SSF54285|TIGR01682 ALFP_RS03370 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002820|IPR023045|IPR023046 Molybdenum cofactor biosynthesis C|Molybdenum cofactor biosynthesis C, bacterial-type|Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 G3DSA:3.30.70.640|MF_01224_B|PF01967|SSF55040|TIGR00581 ALFP_RS03375 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 ALFP_RS03380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PR00344|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 ALFP_RS03385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|TIGR00787 ALFP_RS03390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 ALFP_RS03395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 ALFP_RS03400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012336|IPR013740 Redoxin|Thioredoxin-like fold GO:0016491 G3DSA:3.40.30.10|PF08534|SSF52833 ALFP_RS03405 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005828|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PF07690|SSF103473 ALFP_RS03410 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003760|IPR028082 ABC transporter substrate-binding protein PnrA-like|Periplasmic binding protein-like I GO:0005886 G3DSA:3.40.50.2300|PF02608|SSF53822 ALFP_RS03415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic SSF103481 ALFP_RS03420 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002684|IPR006638|IPR007197|IPR010722|IPR013785|IPR024177 Aldolase-type TIM barrel|Biotin and thiamin synthesis-associated domain|Biotin synthase|Biotin synthase/Biotin biosynthesis bifunctional protein BioAB|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0004076|GO:0009102|GO:0051536 G3DSA:3.20.20.70|MF_01694|PF04055|PF06968|PIRSF001619|SM00729|SM00876|SSF102114|TIGR00433 ALFP_RS03425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637 ALFP_RS03430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021710 Protein of unknown function DUF3293 PF11697 ALFP_RS03435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 ALFP_RS03440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 ALFP_RS03445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PS01081|SSF46689|SSF48498 ALFP_RS03450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007197|IPR013785|IPR024023 Aldolase-type TIM barrel|His-Xaa-Ser system radical SAM maturase HxsB|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF13353|SSF102114|TIGR03978 ALFP_RS03455 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007197|IPR013785|IPR024032 Aldolase-type TIM barrel|His-Xaa-Ser system radical SAM maturase HxsC|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|SSF102114|TIGR03977 ALFP_RS03460 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002477|IPR023928 Conserved hypothetical protein CHP03979|Peptidoglycan binding-like G3DSA:1.10.101.10|PF01471|SSF47090|TIGR03979 ALFP_RS03500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF13426|SM00052|SM00086|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 ALFP_RS03505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003010|IPR004563 Apolipoprotein N-acyltransferase|Carbon-nitrogen hydrolase GO:0006807|GO:0016021|GO:0016410|GO:0016810|GO:0042158 G3DSA:3.60.110.10|MF_01148|PF00795|SSF56317|TIGR00546 ALFP_RS03510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000644|IPR005170|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|SM01091|SSF54631|SSF56176 ALFP_RS03515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002036|IPR023091 Endoribonuclease YbeY|Metalloprotease catalytic domain, predicted GO:0004222|GO:0006364 G3DSA:3.40.390.30|MF_00009|PF02130|SSF55486|TIGR00043 ALFP_RS03520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003714|IPR027417 P-loop containing nucleoside triphosphate hydrolase|PhoH-like protein GO:0005524 G3DSA:3.40.50.300|PF02562|SSF52540 ALFP_RS03525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002792|IPR005839|IPR006463|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Radical SAM|Radical SAM, alpha/beta horseshoe|TRAM domain|tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0003824|GO:0005737|GO:0006400|GO:0009451|GO:0016740|GO:0043412|GO:0051536|GO:0051539 G3DSA:3.80.30.20|MF_01864|PF00919|PF01938|PF04055|PS01278|SM00729|SSF102114|TIGR00089|TIGR01574 ALFP_RS03530 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system PF11903 ALFP_RS03535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000994|IPR001714|IPR002467 Peptidase M24, methionine aminopeptidase|Peptidase M24, structural domain|Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 G3DSA:3.90.230.10|MF_01974|PF00557|PR00599|PS00680|SSF55920|TIGR00500 ALFP_RS03540 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005665|IPR022645|IPR022646|IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 G3DSA:1.20.1640.10|MF_01464_B|PF02355|PF07549|PR01755|SSF82866|TIGR00916|TIGR00966 ALFP_RS03545 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005791|IPR022645|IPR022646|IPR022813|IPR027398 Protein translocase subunit SecD|Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|SecD export protein N-terminal TM domain GO:0006886|GO:0015450 G3DSA:1.20.1640.10|MF_01463_B|PF02355|PF07549|PF13721|SSF82866|TIGR00916|TIGR01129 ALFP_RS03550 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003849 Preprotein translocase YajC PF02699|PR01853|SM01323|TIGR00739 ALFP_RS03555 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002616|IPR004803 Queuine tRNA-ribosyltransferase|tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008033|GO:0008479|GO:0008616 G3DSA:3.20.20.105|MF_00168|PF01702|SSF51713|TIGR00430|TIGR00449 ALFP_RS03560 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 G3DSA:2.40.10.240|G3DSA:3.40.1780.10|MF_00113|PF02547|SSF111337|TIGR00113 ALFP_RS03565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000667|IPR012338 Beta-lactamase/transpeptidase-like|Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 G3DSA:3.40.710.10|PF02113|PR00922|SSF56601|TIGR00666 ALFP_RS03570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005765|IPR029057 Phosphoribosyltransferase-like|Uracil phosphoribosyl transferase GO:0004845|GO:0006223 G3DSA:3.40.50.2020|MF_01218_B|PF14681|SSF53271|TIGR01091 ALFP_RS03580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010279 Protein of unknown function DUF883, ElaB PF05957 ALFP_RS03585 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PF07332 ALFP_RS03595 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS03600 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001663|IPR015879|IPR017941 Aromatic-ring-hydroxylating dioxygenase, alpha subunit|Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0006725|GO:0016491|GO:0016708|GO:0019439|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|PR00090|SSF50022|SSF55961 ALFP_RS03605 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000951|IPR001041|IPR001433|IPR006058|IPR008333|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phthalate dioxygenase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00409|PS00197|SSF52343|SSF54292|SSF63380 ALFP_RS03610 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|SSF51735 ALFP_RS03620 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009499|IPR024033 Protein of unknown function DUF1116|Uncharacterised domain, YlbE G3DSA:1.10.10.660|G3DSA:3.90.1700.10|G3DSA:3.90.1710.10|PF06545 ALFP_RS03625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023631 Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304 ALFP_RS03635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005828|IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PF07690|PS00216|PS00217|SSF103473 ALFP_RS03640 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS03645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004360|IPR004361|IPR018146|IPR029068 Glyoxalase I|Glyoxalase I, conserved site|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0004462|GO:0046872 G3DSA:3.10.180.10|PF00903|PS00934|SSF54593|TIGR00068 ALFP_RS03650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002830|IPR012349|IPR023677 FMN-binding split barrel|UbiD decarboxylyase family|UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694|GO:0010181|GO:0016491|GO:0016831|GO:0055114 G3DSA:1.20.5.570|G3DSA:3.40.1670.10|MF_01636|PF01977|SSF143968|SSF50475|TIGR00148 ALFP_RS03655 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 ALFP_RS03660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PR00753|SSF53383 ALFP_RS03670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002505|IPR012188|IPR012301|IPR012302|IPR016040 Malic enzyme, N-terminal domain|Malic enzyme, NAD-binding|Malic enzyme, phosphate acetyl/butaryl transferase|NAD(P)-binding domain|Phosphate acetyl/butaryl transferase GO:0004471|GO:0004473|GO:0005829|GO:0006108|GO:0008152|GO:0016616|GO:0016746|GO:0030145|GO:0046872|GO:0051287|GO:0055114 G3DSA:3.40.50.10380|G3DSA:3.40.50.10750|G3DSA:3.40.50.720|PF00390|PF01515|PF03949|PIRSF036684|SM00919|SM01274|SSF51735|SSF53223|SSF53659 ALFP_RS03675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|SSF52151 ALFP_RS03680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000468 Barstar (barnase inhibitor) G3DSA:3.30.370.10|PF01337|SSF52038 ALFP_RS03685 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006700|IPR015947|IPR029026|IPR029028 Alpha/beta knot methyltransferases|PUA-like domain|Ribosomal RNA small subunit methyltransferase E|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0006364|GO:0008168 G3DSA:2.40.240.20|G3DSA:3.40.1280.10|PF04452|PIRSF015601|SSF75217|SSF88697|TIGR00046 ALFP_RS03690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005474|IPR005475|IPR005478|IPR009014|IPR029061|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase, bacterial-like|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0004802|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PF02779|PF02780|PS00801|SM00861|SSF52518|SSF52922|TIGR00232 ALFP_RS03695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006424|IPR016040|IPR020828|IPR020829|IPR020830|IPR020831 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, active site|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde-3-phosphate dehydrogenase, type I|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00044|PF02800|PIRSF000149|PR00078|PS00071|SM00846|SSF51735|SSF55347|TIGR01534 ALFP_RS03700 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001576|IPR015824|IPR015901|IPR015911 Phosphoglycerate kinase|Phosphoglycerate kinase, C-terminal|Phosphoglycerate kinase, N-terminal|Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 G3DSA:3.40.50.1260|G3DSA:3.40.50.1270|MF_00145|PF00162|PIRSF000724|PR00477|PS00111|SSF53748 ALFP_RS03705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|SSF51735 ALFP_RS03710 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|SSF53720 ALFP_RS03715 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 ALFP_RS03720 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001453|IPR008284 MoaB/Mog domain|Molybdenum cofactor biosynthesis, conserved site GO:0006777 G3DSA:3.40.980.10|PF00994|PS01078|SM00852|SSF53218|TIGR00177 ALFP_RS03725 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000771|IPR006412|IPR013785 Aldolase-type TIM barrel|Fructose-bisphosphate aldolase, class II, Calvin cycle subtype|Ketose-bisphosphate aldolase, class-II GO:0003824|GO:0004332|GO:0005975|GO:0006096|GO:0008270|GO:0016832 G3DSA:3.20.20.70|PF01116|PIRSF001359|PS00602|PS00806|SSF51569|TIGR00167|TIGR01521 ALFP_RS03730 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001636|IPR013816|IPR018236|IPR028923 ATP-grasp fold, subdomain 2|Phosphoribosylaminoimidazole-succinocarboxamide synthase|SAICAR synthetase, conserved site|SAICAR synthetase/ADE2, N-terminal GO:0004639|GO:0005524|GO:0006164 G3DSA:3.30.200.20|G3DSA:3.30.470.20|MF_00137|PF01259|PS01058|SSF56104|TIGR00081 ALFP_RS03735 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000031|IPR024694 PurE domain|PurE, prokaryotic type GO:0006189 G3DSA:3.40.50.7700|MF_01929|PF00731|PIRSF001338|SM01001|SSF52255|TIGR01162 ALFP_RS03740 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003135|IPR005875|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylaminoimidazole carboxylase, ATPase subunit|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004638|GO:0005524|GO:0006189 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_01928|PF02222|SSF51246|SSF52440|SSF56059|TIGR01161 ALFP_RS03745 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005145|IPR006070|IPR010923|IPR017945 DHBP synthase RibB-like alpha/beta domain|Putative GTP-binding controlling metal-binding domain|YrdC-like domain|tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 GO:0003725 G3DSA:3.90.870.10|PF01300|PF03481|PIRSF004930|SSF55821|TIGR00057 ALFP_RS03750 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 ALFP_RS03755 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|SSF54637 ALFP_RS03760 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00073|SSF47203|SSF56645 ALFP_RS03765 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS03770 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|SSF56235|TIGR00066 ALFP_RS03775 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002376|IPR004810 Formyl transferase, N-terminal|Formyltetrahydrofolate deformylase GO:0006189|GO:0008864|GO:0009058|GO:0016742 G3DSA:3.30.70.260|G3DSA:3.40.50.170|MF_01927|PF00551|PIRSF036480|PR01575|SSF53328|SSF55021|TIGR00655 ALFP_RS03780 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|SSF51905 ALFP_RS03785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|SM00903|SSF50475 ALFP_RS03790 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000659|IPR011576|IPR012349|IPR019576|IPR019740 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase|Pyridoxamine 5'-phosphate oxidase, conserved site|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain|Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0004733|GO:0008615|GO:0010181|GO:0016491|GO:0016638|GO:0055114 G3DSA:2.30.110.10|MF_01629|PF01243|PF10590|PIRSF000190|PS01064|SSF50475|TIGR00558 ALFP_RS03795 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006840|IPR013024 Butirosin biosynthesis, BtrG-like|ChaC-like protein G3DSA:3.10.490.10|PF04752|SSF110857 ALFP_RS03800 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000594|IPR016040 NAD(P)-binding domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|SSF69572 ALFP_RS03805 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|SSF56752 ALFP_RS03810 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005801|IPR005802|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal|Para-aminobenzoate synthase, component I GO:0009058|GO:0009396 G3DSA:3.60.120.10|PF00425|PR00095|SSF56322|TIGR00553 ALFP_RS03815 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR004602|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR00630 ALFP_RS03825 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 ALFP_RS03835 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR022374|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, ATP-binding protein, ChvD|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|SM00382|SSF52540|TIGR03719 ALFP_RS03840 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 ALFP_RS03845 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008816 Glycine zipper 2TM domain GO:0019867 PD052686|PF05433 ALFP_RS03850 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015879|IPR017941 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0016491|GO:0016708|GO:0019439|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|SSF50022|SSF55961 ALFP_RS03855 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 G3DSA:3.30.1070.10|MF_00262|PF03776|SSF55229|TIGR01215 ALFP_RS03860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002586|IPR010223|IPR025501|IPR027417 ATP binding protein MinD|ATP binding protein MinD, bacterial-type|CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0016887 G3DSA:3.40.50.300|PF01656|PIRSF003092|SSF52540|TIGR01968 ALFP_RS03865 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005526|IPR007874|IPR013033|IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal|Septum formation inhibitor MinC|Septum formation inhibitor MinC, C-terminal|Septum formation inhibitor MinC, N-terminal GO:0000902|GO:0051302|GO:0051726|GO:1901891 G3DSA:2.160.20.70|MF_00267|PF03775|PF05209|SSF63848|TIGR01222 ALFP_RS03870 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000924|IPR001412|IPR004514|IPR011035|IPR014729|IPR020056|IPR020058|IPR020059|IPR020061|IPR022861 Aminoacyl-tRNA synthetase, class I, conserved site|Glutamine-tRNA ligase, bacterial|Glutamine-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004819|GO:0005524|GO:0005737|GO:0006412|GO:0006418|GO:0006425|GO:0016876|GO:0043039 G3DSA:1.10.1160.10|G3DSA:2.40.240.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00126|PF00749|PF03950|PR00987|PS00178|SSF50715|SSF52374|TIGR00440 ALFP_RS03875 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PF01654|PIRSF006446 ALFP_RS03880 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PF02322 ALFP_RS03885 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000644|IPR001807|IPR014743 CBS domain|Chloride channel, core|Chloride channel, voltage gated GO:0005216|GO:0005247|GO:0006821|GO:0016020|GO:0055085 G3DSA:1.10.3080.10|G3DSA:3.10.580.10|PF00571|PF00654|PR00762|SM00116|SSF54631|SSF81340 ALFP_RS03895 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001650|IPR002121|IPR004589|IPR006293|IPR010997|IPR011545|IPR011991|IPR014001|IPR018982|IPR027417|IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain|DEAD/DEAH box helicase domain|DNA helicase, ATP-dependent, RecQ type|DNA helicase, ATP-dependent, RecQ type, bacterial|HRDC domain|HRDC-like|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|RQC domain|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003676|GO:0003824|GO:0004003|GO:0005524|GO:0005622|GO:0006260|GO:0006281|GO:0006310|GO:0008026|GO:0009432|GO:0043140|GO:0044237 G3DSA:1.10.10.10|G3DSA:1.10.150.80|G3DSA:3.40.50.300|PF00270|PF00271|PF00570|PF09382|PF16124|SM00341|SM00487|SM00490|SM00956|SSF47819|SSF52540|TIGR00614|TIGR01389 ALFP_RS03900 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000788|IPR005144|IPR008926|IPR013346|IPR013509 ATP-cone domain|Ribonucleotide reductase R1 subunit, N-terminal|Ribonucleotide reductase large subunit, C-terminal|Ribonucleotide reductase large subunit, N-terminal|Ribonucleotide reductase, class I , alpha subunit GO:0004748|GO:0005524|GO:0006260|GO:0055114 G3DSA:3.20.70.20|PF00317|PF02867|PF03477|PR01183|PS00089|SSF48168|SSF51998|TIGR02506 ALFP_RS03905 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000358|IPR009078|IPR012348|IPR030475 Ferritin-like superfamily|Ribonucleotide reductase small subunit|Ribonucleotide reductase small subunit, acitve site|Ribonucleotide reductase-related GO:0009186|GO:0016491|GO:0055114 G3DSA:1.10.620.20|PF00268|PS00368|SSF47240 ALFP_RS03910 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PS00197|SSF54292 ALFP_RS03915 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032524|IPR032781 AAA+ ATPase domain|ABC transporter Uup, C-terminal|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PF16326|PS00211|SM00382|SSF52540 ALFP_RS03925 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003444|IPR020603 MraZ domain|Transcriptional regulator MraZ GO:0003700|GO:0006355 MF_01008|PD006745|PF02381|SSF89447|TIGR00242 ALFP_RS03930 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002903|IPR023397|IPR029063 Ribosomal RNA small subunit methyltransferase H|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 G3DSA:1.10.150.170|G3DSA:3.40.50.150|MF_01007|PF01795|PIRSF004486|SSF53335|SSF81799|TIGR00006 ALFP_RS03935 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 MF_00910|PF04999|TIGR02209 ALFP_RS03940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001460|IPR005311|IPR012338 Beta-lactamase/transpeptidase-like|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|SSF56519|SSF56601 ALFP_RS03945 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000713|IPR004101|IPR005761|IPR005863|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase|UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0009058|GO:0016874|GO:0016881|GO:0047480|GO:0051301|GO:0071555 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_00208|MF_02019|PF01225|PF02875|PF08245|SSF53244|SSF53623|SSF63418|TIGR01085|TIGR01143 ALFP_RS03950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000715|IPR003524|IPR018480 Glycosyl transferase, family 4|Phospho-N-acetylmuramoyl-pentapeptide transferase|Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site GO:0008963|GO:0016020|GO:0016021 MF_00038|PF00953|PF10555|PS01347|PS01348|TIGR00445 ALFP_RS03955 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004101|IPR005762|IPR013221|IPR016040|IPR018109 Folylpolyglutamate synthetase, conserved site|Mur ligase, C-terminal|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0004326|GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0009058|GO:0009396|GO:0016874|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00639|PF02875|PF08245|PS01011|SSF51984|SSF53244|SSF53623|TIGR01087 ALFP_RS03960 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001182|IPR013437 Cell cycle protein FtsW/RodA|Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 MF_00913|PF01098|TIGR02614 ALFP_RS03965 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004276|IPR006009|IPR007235 Glycosyl transferase, family 28, C-terminal|Glycosyltransferase family 28, N-terminal domain|N-acetylglucosaminyltransferase, MurG GO:0005975|GO:0009252|GO:0016758|GO:0030259|GO:0050511 G3DSA:3.40.50.2000|MF_00033|PF03033|PF04101|SSF53756|TIGR01133 ALFP_RS03970 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000713|IPR004101|IPR005758|IPR013221|IPR016040 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramate--L-alanine ligase GO:0005524|GO:0008763|GO:0009058|GO:0009252|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00046|PF01225|PF02875|PF08245|SSF51984|SSF53244|SSF53623|TIGR01082 ALFP_RS03975 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000291|IPR005905|IPR011095|IPR011127|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|D-alanine--D-alanine ligase|D-alanine--D-alanine ligase, C-terminal|D-alanine--D-alanine ligase, N-terminal domain|D-alanine--D-alanine ligase/VANA/B/C, conserved site|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0005737|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00047|PF01820|PF07478|PIRSF039102|PS00843|PS00844|SSF52440|SSF56059|TIGR01205 ALFP_RS03980 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005548|IPR013685|IPR026579 Cell division protein FtsQ|Cell division protein FtsQ/DivIB|Polypeptide-transport-associated, FtsQ-type GO:0090529 MF_00911|PF03799|PF08478 ALFP_RS03985 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003494|IPR020823 Cell division protein FtsA|SHS2 domain inserted in FtsA GO:0005515|GO:0007049 G3DSA:3.30.1490.110|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_02033|PF02491|PF14450|PIRSF003101|SM00842|SSF53067|TIGR01174 ALFP_RS03990 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000158|IPR003008|IPR008280|IPR018316|IPR020805|IPR024757 Cell division protein FtsZ|Cell division protein FtsZ, C-terminal|Cell division protein FtsZ, conserved site|Tubulin/FtsZ, 2-layer sandwich domain|Tubulin/FtsZ, C-terminal|Tubulin/FtsZ, GTPase domain GO:0003924|GO:0005525|GO:0005737 G3DSA:3.30.1330.20|G3DSA:3.40.50.1440|MF_00909|PF00091|PF12327|PR00423|PS01135|SM00864|SM00865|SSF52490|SSF55307|TIGR00065 ALFP_RS03995 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004463|IPR011334|IPR015870|IPR020568 Ribosomal protein S5 domain 2-type fold|UDP-3-O-acyl N-acetylglucosamine deacetylase|UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal|UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 G3DSA:3.30.1700.10|G3DSA:3.30.230.20|MF_00388|PF03331|SSF54211|TIGR00325 ALFP_RS04000 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007922 Protein of unknown function DUF721/UPF0232 PF05258 ALFP_RS04005 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|SSF51261 ALFP_RS04010 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000185|IPR004027|IPR011115|IPR011116|IPR011130|IPR020937|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Protein translocase subunit SecA|SEC-C motif|SecA DEAD-like, N-terminal|SecA Wing/Scaffold|SecA conserved site|SecA preprotein, cross-linking domain GO:0005524|GO:0006605|GO:0006886|GO:0016020|GO:0017038 G3DSA:1.10.3060.10|G3DSA:3.40.50.300|G3DSA:3.90.1440.10|MF_01382|PF01043|PF02810|PF07516|PF07517|PR00906|PS01312|SM00957|SM00958|SSF52540|SSF81767|SSF81886|TIGR00963 ALFP_RS04015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006115|IPR008927|IPR013328|IPR015814|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain|Phosphogluconate dehydrogenase, NAD-binding, putative, C-terminal GO:0004616|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF09130|SSF48179|SSF51735 ALFP_RS04020 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000644|IPR006667|IPR006668|IPR006669 CBS domain|Magnesium transporter MgtE|Magnesium transporter, MgtE intracellular domain|SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324|GO:0015095|GO:0015693|GO:0016020 G3DSA:1.10.357.20|G3DSA:1.25.60.10|G3DSA:3.10.580.10|PF00571|PF01769|PF03448|SM00116|SM00924|SSF158791|SSF161093|SSF54631|TIGR00400 ALFP_RS04025 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637 ALFP_RS04030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|SSF53187|SSF55031|TIGR01891 ALFP_RS04035 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 ALFP_RS04040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000760|IPR020583|IPR022337 Inositol monophosphatase|Inositol monophosphatase, SuhB|Inositol monophosphatase, metal-binding site GO:0008934|GO:0046854|GO:0046855 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PR01959|PS00629|SSF56655 ALFP_RS04045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006076|IPR008471|IPR017610|IPR023032|IPR023753|IPR029063 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain|MnmC-like methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase|tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC|tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0004808|GO:0008033|GO:0008168|GO:0016491|GO:0016645|GO:0055114 G3DSA:3.40.50.150|G3DSA:3.50.50.60|MF_01102|PF01266|PF05430|SSF51905|TIGR03197 ALFP_RS04050 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000322|IPR011013|IPR017853 Galactose mutarotase-like domain|Glycoside hydrolase family 31|Glycoside hydrolase superfamily GO:0003824|GO:0004553|GO:0005975|GO:0030246 PF01055|SSF51011|SSF51445|SSF74650 ALFP_RS04060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR018449|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|NIL domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.30.70.260|G3DSA:3.40.50.300|PF00005|PF09383|PS00211|SM00382|SM00930|SSF52540|SSF55021 ALFP_RS04065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS04070 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004872 Lipoprotein NlpA family G3DSA:3.40.190.10|PF03180|PIRSF002854|SSF53850 ALFP_RS04075 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001320|IPR001638|IPR018313 Ionotropic glutamate receptor|Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0004970|GO:0005215|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF00497|PS01039|SM00062|SM00079|SSF53850 ALFP_RS04080 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 ALFP_RS04085 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 ALFP_RS04095 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|SSF53448 ALFP_RS04100 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002575|IPR011009 Aminoglycoside phosphotransferase|Protein kinase-like domain G3DSA:3.30.200.20|G3DSA:3.90.1200.10|PF01636|SSF56112 ALFP_RS04105 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007543|IPR020889 LPS-assembly protein LptD|Organic solvent tolerance protein, C-terminal GO:0009279|GO:0010033|GO:0015920|GO:0019867|GO:0043165|GO:0061024 G3DSA:2.60.450.10|MF_01411|PF04453 ALFP_RS04110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000297|IPR015391|IPR023034|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Peptidyl-prolyl isomerase SurA|SurA N-terminal|Trigger factor/SurA domain GO:0003755|GO:0006457|GO:0016853|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 G3DSA:3.10.50.40|MF_01183|PF00639|PF09312|PF13616|SSF109998|SSF54534 ALFP_RS04115 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001737|IPR011530|IPR020596|IPR020598|IPR023165|IPR029063 Ribosomal RNA adenine dimethylase|Ribosomal RNA adenine methylase transferase, N-terminal|Ribosomal RNA adenine methylase transferase, conserved site|Ribosomal RNA adenine methyltransferase KsgA/Erm|S-adenosyl-L-methionine-dependent methyltransferase|rRNA adenine dimethylase-like GO:0000154|GO:0000179|GO:0006364|GO:0008649 G3DSA:1.10.8.100|G3DSA:3.40.50.150|MF_00607|PF00398|PS01131|SM00650|SSF53335|TIGR00755 ALFP_RS04120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011415|IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain|Predicted bifunctional spore maturation protein, fused SpmA/SpmB PF07670|PIRSF036542 ALFP_RS04125 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004360|IPR004361|IPR018146|IPR029068 Glyoxalase I|Glyoxalase I, conserved site|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0004462|GO:0046872 G3DSA:3.10.180.10|PF00903|PS00934|SSF54593|TIGR00068 ALFP_RS04130 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002725 Protein of unknown function DUF45 PF01863 ALFP_RS04135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|SM00563|SSF69593 ALFP_RS04140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004446|IPR006543|IPR006549|IPR023214 D,D-heptose 1,7-bisphosphate phosphatase|HAD-like domain|HAD-superfamily hydrolase,subfamily IIIA|Histidinol-phosphate phosphatase GO:0005975|GO:0016791 G3DSA:3.40.50.1000|PF13242|PIRSF004682|SSF56784|TIGR01656|TIGR01662 ALFP_RS04145 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006674|IPR008909|IPR009080|IPR015944 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|DALR anticodon binding|Glycine-tRNA ligase, beta subunit|HD domain GO:0000166|GO:0004812|GO:0004814|GO:0004820|GO:0005524|GO:0005737|GO:0006418|GO:0006420|GO:0006426 G3DSA:1.10.3210.10|G3DSA:1.10.730.10|MF_00255|PF02092|PF05746|PR01045|SM00836|SSF109604|TIGR00211 ALFP_RS04150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 G3DSA:1.20.58.180|G3DSA:3.30.930.10|MF_00254|PF02091|PR01044|SSF55681|TIGR00388 ALFP_RS04155 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001753|IPR014748|IPR018376|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PS00166|SSF52096 ALFP_RS04160 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004646|IPR004647|IPR011167 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain|Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain|Iron-dependent fumarate hydratase GO:0004333|GO:0006091|GO:0016829|GO:0016836 G3DSA:3.20.130.10|PF05681|PF05683|PIRSF001394|SSF117457|TIGR00722|TIGR00723 ALFP_RS04165 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PS01081|SSF46689|SSF48498 ALFP_RS04170 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS04175 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS04185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006638|IPR010994|IPR013785|IPR023874 Aldolase-type TIM barrel|DNA modification/repair radical SAM protein, putative|Elongator protein 3/MiaB/NifB|RuvA domain 2-like GO:0003824|GO:0051536 G3DSA:3.20.20.70|SM00729|SSF102114|SSF47781|TIGR03916 ALFP_RS04190 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005122|IPR005273|IPR023875|IPR025404 DNA metabolism protein, putative|Domain of unknown function DUF4130|Uracil-DNA glycosylase, family 4 domain|Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|PF13566|SM00986|SM00987|SSF52141|TIGR03914|TIGR03915 ALFP_RS04195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 G3DSA:3.30.70.560|PF01288|PS00794|SSF55083|TIGR01498 ALFP_RS04200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002646|IPR010206|IPR025866|IPR032828 Poly A polymerase, head domain|Poly(A) polymerase I|Polymerase A arginine-rich C-terminal domain|tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GO:0003723|GO:0004652|GO:0006378|GO:0006396|GO:0016779 G3DSA:1.10.3090.10|G3DSA:3.30.460.10|MF_00957|PF01743|PF12626|PF12627|SSF81301|SSF81891|TIGR01942 ALFP_RS04205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006383|IPR006385|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IB, PSPase-like|HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial GO:0008152|GO:0016791 G3DSA:1.20.1440.100|G3DSA:3.40.50.1000|PF12710|SSF56784|TIGR01488|TIGR01490 ALFP_RS04210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013317|IPR017788|IPR027417 Chromosomal replication initiator protein DnaA|DnaA regulatory inactivator Hda|P-loop containing nucleoside triphosphate hydrolase GO:0032297 G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00308|SSF52540|TIGR03420 ALFP_RS04215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004733|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|Phosphoribosylformylglycinamidine cyclo-ligase|PurM-like, N-terminal domain GO:0004641|GO:0005737|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00741|PF00586|PF02769|SSF55326|SSF56042|TIGR00878 ALFP_RS04220 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PF02133 ALFP_RS04225 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018022|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA dimethylallyltransferase GO:0008033 G3DSA:1.10.287.890|G3DSA:3.40.50.300|MF_00185|PF01715|SSF52540|TIGR00174 ALFP_RS04230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002099|IPR003594|IPR013507|IPR014721|IPR014762|IPR014790|IPR020568|IPR020667 DNA mismatch repair protein family|DNA mismatch repair protein, C-terminal|DNA mismatch repair protein, MutL|DNA mismatch repair, conserved site|Histidine kinase-like ATPase, C-terminal domain|MutL, C-terminal, dimerisation|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0006298|GO:0030983 G3DSA:3.30.230.10|G3DSA:3.30.565.10|MF_00149|PF01119|PF08676|PF13589|PS00058|SM00853|SM01340|SSF118116|SSF54211|SSF55874|TIGR00585 ALFP_RS04235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR032816 SNARE associated Golgi protein PF09335 ALFP_RS04240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002508|IPR021731 AMIN domain|N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 G3DSA:3.40.630.40|PF01520|PF11741|SM00646|SSF53187 ALFP_RS04245 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003442|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 G3DSA:3.40.50.300|PF02367|SSF52540|TIGR00150 ALFP_RS04250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004776 Membrane transport protein GO:0016021|GO:0055085 PF03547 ALFP_RS04255 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS04260 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002505|IPR012188|IPR012301|IPR012302|IPR016040 Malic enzyme, N-terminal domain|Malic enzyme, NAD-binding|Malic enzyme, phosphate acetyl/butaryl transferase|NAD(P)-binding domain|Phosphate acetyl/butaryl transferase GO:0004471|GO:0004473|GO:0005829|GO:0006108|GO:0008152|GO:0016616|GO:0016746|GO:0030145|GO:0046872|GO:0051287|GO:0055114 G3DSA:3.40.50.10380|G3DSA:3.40.50.10750|G3DSA:3.40.50.720|PF00390|PF01515|PF03949|PIRSF036684|SM00919|SM01274|SSF51735|SSF53223|SSF53659 ALFP_RS04265 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS04270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015590|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00687|SSF53720 ALFP_RS04275 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002220|IPR005263|IPR013785 4-hydroxy-tetrahydrodipicolinate synthase, DapA|Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0008840|GO:0009089|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|PR00146|SM01130|SSF51569|TIGR00674 ALFP_RS04280 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 ALFP_RS04285 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 ALFP_RS04290 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 ALFP_RS04295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018389|IPR026289 Solute binding protein, mannitol/chloroaromatic system-like|TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PIRSF039026 ALFP_RS04305 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007251 Low affinity iron permease, Fet4 GO:0055085 PF04120 ALFP_RS04310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009078|IPR012347 Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|SSF47240 ALFP_RS04315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007896 Chlorhexidine efflux transporter PF05232 ALFP_RS04320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|SSF46785 ALFP_RS04325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF13460|SSF51735 ALFP_RS04330 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF07366|SSF54427 ALFP_RS04335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS04340 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004369|IPR007214 Prolyl-tRNA editing protein, YbaK/EbsC|YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 G3DSA:3.90.960.10|PF04073|PIRSF006181|SSF55826|TIGR00011 ALFP_RS04345 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002104|IPR004107|IPR011010|IPR011932|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD|Tyrosine recombinase XerD GO:0003677|GO:0006310|GO:0009009|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01807|MF_01808|PF00589|PF02899|SSF56349|TIGR02225 ALFP_RS04350 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 G3DSA:3.40.190.10|PF13531|PIRSF004846|SSF53850|TIGR01256 ALFP_RS04355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR011867 ABC transporter type 1, transmembrane domain MetI-like|Molybdate ABC transporter, permease protein GO:0006810|GO:0015098|GO:0015689|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR02141 ALFP_RS04360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 ALFP_RS04365 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR004606|IPR005116|IPR008995|IPR011991|IPR016462 Molybdate-dependent transcriptional regulator ModE|Molybdate/tungstate binding, C-terminal|Molybdenum-pterin binding|Transcription regulator HTH, LysR|Transport-associated OB, type 1|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355|GO:0006810|GO:0015689|GO:0030151 G3DSA:1.10.10.10|G3DSA:2.40.50.100|PF00126|PF03459|PIRSF005763|SSF46785|SSF50331|TIGR00638 ALFP_RS04370 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR019925|IPR027417 DNA repair protein, predicted|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF12705|SSF52540|TIGR03623 ALFP_RS04375 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011335|IPR014016|IPR014017|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease type II-like|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0005524|GO:0016787 G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF12705|PF13361|SSF52540|SSF52980 ALFP_RS04385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003593|IPR008921|IPR012763|IPR021029|IPR022754|IPR027417 AAA+ ATPase domain|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, gamma subunit, domain III|DNA polymerase III, subunit gamma/ tau|DNA polymerase III, tau subunit, domain V|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0005524|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF12169|PF12170|PF13177|SM00382|SSF48019|SSF52540|TIGR02397 ALFP_RS04390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004401 Nucleoid-associated protein YbaB/EbfC family G3DSA:3.30.1310.10|MF_00274|PF02575|PIRSF004555|SSF82607|TIGR00103 ALFP_RS04395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000093|IPR006171|IPR023627|IPR023628 DNA recombination protein RecR|Recombination protein RecR|Recombination protein RecR, C4-type zinc finger|Toprim domain GO:0003677|GO:0006281|GO:0006310 MF_00017|PF02132|PF13662|SM00493|SSF111304|TIGR00615 ALFP_RS04400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF13379|SM00062|SSF53850 ALFP_RS04405 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS04410 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS04415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 ALFP_RS04420 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006860|IPR012373|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal PF04773|PF16220|PIRSF018266 ALFP_RS04425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010105|IPR011662|IPR012910 Secretin/TonB, short N-terminal domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07660|PF07715|SM00965|SSF56935|TIGR01783 ALFP_RS04430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011048|IPR015943 Cytochrome cd1-nitrite reductase-like, haem d1 domain|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|SSF51004 ALFP_RS04435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001585|IPR004730|IPR013785|IPR018225 Aldolase-type TIM barrel|Transaldolase type 1|Transaldolase, active site|Transaldolase/Fructose-6-phosphate aldolase GO:0003824|GO:0004801|GO:0005737|GO:0005975|GO:0006098 G3DSA:3.20.20.70|MF_00492|PF00923|PS00958|PS01054|SSF51569|TIGR00874 ALFP_RS04440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002474|IPR006274|IPR017926|IPR029062 Carbamoyl-phosphate synthase, small subunit|Carbamoyl-phosphate synthase, small subunit N-terminal domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0004088|GO:0006207|GO:0006541 G3DSA:3.40.50.880|G3DSA:3.50.30.20|MF_01209|PF00117|PF00988|PR00096|PR00099|SM01097|SSF52021|SSF52317|TIGR01368 ALFP_RS04445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005479|IPR005480|IPR005483|IPR006275|IPR011607|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Carbamoyl-phosphate synthase large subunit, CPSase domain|Carbamoyl-phosphate synthase, large subunit|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carbamoyl-phosphate synthetase, large subunit oligomerisation domain|Methylglyoxal synthase-like domain|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0006807 G3DSA:1.10.1030.10|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.1380|G3DSA:3.40.50.20|MF_01210_A|MF_01210_B|PF02142|PF02786|PF02787|PR00098|PS00866|PS00867|SM00851|SM01096|SSF48108|SSF52335|SSF52440|SSF56059|TIGR01369 ALFP_RS04450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007803|IPR027443 Aspartyl/asparaginy/proline hydroxylase|Isopenicillin N synthase-like GO:0018193 G3DSA:2.60.120.330|PF05118|SSF51197 ALFP_RS04455 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SM00822|SSF51735 ALFP_RS04460 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001345|IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 G3DSA:3.40.50.1240|PF00300|PS00175|SM00855|SSF53254 ALFP_RS04465 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006042|IPR006043 Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00860|PS01116|TIGR00801 ALFP_RS04470 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001437|IPR006359|IPR018151|IPR022691|IPR023459|IPR028624 Transcription elongation factor GreA|Transcription elongation factor GreA/GreB|Transcription elongation factor GreA/GreB family|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|PF01272|PF03449|PIRSF006092|PS00829|PS00830|SSF46557|SSF54534|TIGR01462 ALFP_RS04475 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001890 RNA-binding, CRM domain GO:0003723 G3DSA:3.30.110.60|PD010559|PF01985|SM01103|SSF75471 ALFP_RS04480 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002877|IPR015507|IPR029063 Ribosomal RNA large subunit methyltransferase E|Ribosomal RNA methyltransferase FtsJ domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0001510|GO:0008168|GO:0032259 G3DSA:3.40.50.150|MF_01547|PF01728|PIRSF005461|SSF53335 ALFP_RS04485 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR011546|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase M41, FtsH extracellular|Peptidase, FtsH GO:0004222|GO:0005524|GO:0006508|GO:0008270|GO:0016020|GO:0016021 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PF06480|PS00674|SM00382|SSF140990|SSF52540|TIGR01241 ALFP_RS04490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000489|IPR006390|IPR011005 Dihydropteroate synthase|Dihydropteroate synthase-like|Pterin-binding domain GO:0004156|GO:0009396|GO:0042558|GO:0044237 G3DSA:3.20.20.20|PF00809|PS00793|SSF51717|TIGR01496 ALFP_RS04495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR006352|IPR016055|IPR016066 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site|Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|MF_01554_B|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|SSF53738|SSF55957|TIGR01455 ALFP_RS04500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13444|SSF55729 ALFP_RS04505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003695|IPR030673 Ppx/GppA phosphatase|Pyrophosphatase, GppA/Ppx-type G3DSA:3.30.420.150|G3DSA:3.30.420.40|PF02541|PIRSF001267|SSF109604|SSF53067 ALFP_RS04510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003414|IPR024953|IPR025198|IPR025200 Polyphosphate kinase|Polyphosphate kinase C-terminal domain|Polyphosphate kinase N-terminal domain|Polyphosphate kinase middle domain GO:0006799|GO:0008976|GO:0009358 G3DSA:3.30.1840.10|G3DSA:3.30.870.10|MF_00347|PF02503|PF13089|PF13090|PIRSF015589|SSF140356|SSF143724|SSF56024|TIGR03705 ALFP_RS04515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005673|IPR024370 ABC transporter, phosphate-binding protein PstS|PBP domain GO:0035435|GO:0042301|GO:0043190 G3DSA:3.40.190.10|PF12849|PIRSF002756|SSF53850|TIGR00975 ALFP_RS04520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR011864 ABC transporter type 1, transmembrane domain MetI-like|Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006810|GO:0006817|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR02138 ALFP_RS04525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR005672 ABC transporter type 1, transmembrane domain MetI-like|Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0006810|GO:0016020|GO:0035435 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR00974 ALFP_RS04530 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR005670|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Phosphate transport system permease protein 1 GO:0005315|GO:0005524|GO:0016020|GO:0016887|GO:0035435 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR00972 ALFP_RS04535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 ALFP_RS04540 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10 ALFP_RS04550 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 ALFP_RS04555 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003594|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 G3DSA:3.30.565.10|PF02518|PR00344|SM00387|SSF55874 ALFP_RS04560 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR032808 DoxX family PF07681 ALFP_RS04565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 ALFP_RS04570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS04575 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007896 Chlorhexidine efflux transporter PF05232 ALFP_RS04585 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|G3DSA:3.90.660.10|PF01593|PR00411|SSF51905|SSF54373 ALFP_RS04590 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008168|IPR009056 Cytochrome c, class IC|Cytochrome c-like domain GO:0005506|GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PR00605|SSF46626 ALFP_RS04595 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007353|IPR023090 Protein of unknown function DUF421|Uncharacterised domain UPF0702, alpha/beta domain G3DSA:3.30.240.20|PF04239 ALFP_RS04610 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000917|IPR012160|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Lipoteichoic acid synthase-like|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|PIRSF005091|SSF53649 ALFP_RS04615 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002869|IPR011766|IPR019752|IPR029061 Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0016491|GO:0016903|GO:0030976|GO:0055114 G3DSA:3.40.50.970|G3DSA:3.40.920.10|PF01558|PF02775|SSF52518|SSF53323 ALFP_RS04620 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS04625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 G3DSA:2.40.230.10|PF02253|PR01486|SSF56931 ALFP_RS04635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007436 Protein of unknown function DUF485 PF04341 ALFP_RS04640 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001734|IPR018212 Sodium/solute symporter|Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474|PS00456|TIGR00813 ALFP_RS04645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011965|IPR011991|IPR012906|IPR013225 PaaX-like, C-terminal|PaaX-like, N-terminal|Phenylacetic acid degradation operon negative regulatory protein PaaX|Winged helix-turn-helix DNA-binding domain GO:0006351 G3DSA:1.10.10.10|PF07848|PF08223|PIRSF020623|TIGR02277 ALFP_RS04650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001736|IPR025202|IPR027379 Cardiolipin synthase N-terminal|Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824 G3DSA:3.30.870.10|PF13091|PF13396|SM00155|SSF56024 ALFP_RS04665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006070|IPR017945 DHBP synthase RibB-like alpha/beta domain|YrdC-like domain GO:0003725 G3DSA:3.90.870.10|PF01300|SSF55821|TIGR00057 ALFP_RS04670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008915 Peptidase M50 GO:0004222|GO:0006508 PF02163 ALFP_RS04675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002220|IPR005263|IPR013785|IPR020625 4-hydroxy-tetrahydrodipicolinate synthase, DapA|Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, active site GO:0003824|GO:0008152|GO:0008840|GO:0009089|GO:0016829 G3DSA:3.20.20.70|MF_00418|PF00701|PIRSF001365|PR00146|PS00666|SM01130|SSF51569|TIGR00674 ALFP_RS04680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010653 NlpB/DapX lipoprotein PF06804 ALFP_RS04685 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011991|IPR013249|IPR013324 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 3/4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|PF08281|SSF88659 ALFP_RS04690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR032623 FecR, N-terminal PF16220 ALFP_RS04695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004472|IPR027417 Dethiobiotin synthase BioD|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0004141|GO:0005524|GO:0009102 G3DSA:3.40.50.300|MF_00336|PF13500|PIRSF006755|SSF52540|TIGR00347 ALFP_RS04700 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005814|IPR005815|IPR015421|IPR015422|IPR015424 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004015|GO:0008483|GO:0009102|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PIRSF000521|PS00600|SSF53383|TIGR00508 ALFP_RS04705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383 ALFP_RS04710 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001128|IPR002397 Cytochrome P450|Cytochrome P450, B-class GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|SSF48264 ALFP_RS04715 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002711|IPR003615 HNH endonuclease|HNH nuclease GO:0003676|GO:0004519 PF01844|SM00507 ALFP_RS04720 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 PF03594|TIGR00843 ALFP_RS04725 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003347 JmjC domain G3DSA:2.60.120.650|PF08007|SM00558|SSF51197 ALFP_RS04730 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000432|IPR005748|IPR007695|IPR007696|IPR007860|IPR007861|IPR016151|IPR027417 DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS, N-terminal|DNA mismatch repair protein MutS, clamp|DNA mismatch repair protein MutS, connector domain|DNA mismatch repair protein MutS, core|DNA mismatch repair protein MutS, type 1|DNA mismatch repair protein MutS-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006298|GO:0030983 G3DSA:1.10.1420.10|G3DSA:3.30.420.110|G3DSA:3.40.1170.10|G3DSA:3.40.50.300|MF_00096|PF00488|PF01624|PF05188|PF05190|PF05192|PS00486|SM00533|SM00534|SSF48334|SSF52540|SSF53150|SSF55271|TIGR01070 ALFP_RS04735 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011048|IPR015943 Cytochrome cd1-nitrite reductase-like, haem d1 domain|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|SSF51004 ALFP_RS04740 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010105|IPR010917|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|SSF56935|TIGR01783 ALFP_RS04745 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 ALFP_RS04750 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR003838|IPR017871|IPR025857|IPR027417 AAA+ ATPase domain|ABC transporter permease protein domain|ABC transporter, conserved site|ABC transporter-like|MacB-like periplasmic core domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PF02687|PF12704|PS00211|SM00382|SSF52540 ALFP_RS04755 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|PF02321|SSF56954|TIGR01845 ALFP_RS04760 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006148|IPR018321 Glucosamine-6-phosphate isomerase, conserved site|Glucosamine/galactosamine-6-phosphate isomerase GO:0004342|GO:0005975|GO:0006044 G3DSA:3.40.50.1360|PF01182|PS01161|SSF100950 ALFP_RS04765 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 ALFP_RS04770 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|SSF56235 ALFP_RS04775 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS04780 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS04785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011251|IPR019949 Luciferase family oxidoreductase, group 1|Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|SSF51679|TIGR03558 ALFP_RS04790 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|SSF53335 ALFP_RS04795 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006685|IPR010920|IPR011014|IPR011066 LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|SSF50182|SSF82689|SSF82861 ALFP_RS04800 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS04805 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001227|IPR014043|IPR016035|IPR016036|IPR020801 Acyl transferase|Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Malonyl-CoA ACP transacylase, ACP-binding|Polyketide synthase, acyl transferase domain GO:0003824|GO:0008152|GO:0016740 G3DSA:3.30.70.250|G3DSA:3.40.366.10|PF00698|SM00827|SSF52151|SSF55048 ALFP_RS04810 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 PF01874 ALFP_RS04815 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 PF10620|TIGR03135 ALFP_RS04820 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009648|IPR011763|IPR029045 Acetyl-coenzyme A carboxyltransferase, C-terminal|Biotin-dependent malonate decarboxylase, gamma subunit|ClpP/crotonase-like domain GO:0016874|GO:0044262 G3DSA:3.90.226.10|PF06833|SSF52096|TIGR03134 ALFP_RS04825 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000022|IPR000438|IPR017556|IPR029045 Acetyl-CoA carboxylase carboxyl transferase, beta subunit|Biotin-independent malonate decarboxylase, beta subunit|Carboxyl transferase|ClpP/crotonase-like domain GO:0003989|GO:0006633|GO:0009317|GO:0016831|GO:0044262 G3DSA:3.90.226.10|PF01039|PR01070|SSF52096|TIGR03133 ALFP_RS04830 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009662|IPR023439 Malonate decarboxylase delta subunit|Malonate decarboxylase/citrate lyase acyl carrier protein MF_00710|PD015450|PF06857|TIGR03130 ALFP_RS04835 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005777 Acetyl-S-ACP:malonate ACP transferase G3DSA:3.40.1080.10|PF16957|SSF100950|TIGR01110 ALFP_RS04840 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023631 Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304 ALFP_RS04845 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 ALFP_RS04850 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001537|IPR004384|IPR029026|IPR029028 Alpha/beta knot methyltransferases|RNA methyltransferase TrmH, group 1|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:3.40.1280.10|PF00588|PIRSF004808|SSF75217|TIGR00050 ALFP_RS04855 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000760|IPR020550|IPR020583|IPR022337 Inositol monophosphatase|Inositol monophosphatase, SuhB|Inositol monophosphatase, conserved site|Inositol monophosphatase, metal-binding site GO:0008934|GO:0046854|GO:0046855 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PR01959|PS00629|PS00630|SSF56655 ALFP_RS04860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000644|IPR005170|IPR005496|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|Integral membrane protein TerC|Transporter-associated domain GO:0003824|GO:0016021|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|PF03741|SM01091|SSF54631|SSF56176 ALFP_RS04865 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 MF_01006|PF02673|TIGR00753 ALFP_RS04875 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004843|IPR010138|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like|UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462|GO:0016787 G3DSA:3.60.21.10|MF_00575|PF00149|SSF56300|TIGR01854 ALFP_RS04880 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002130|IPR020892|IPR029000 Cyclophilin-like domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PR00153|PS00170|SSF50891 ALFP_RS04885 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SM00028|SSF48452 ALFP_RS04890 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009080|IPR014729|IPR015273|IPR015803|IPR024909|IPR032678 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Cysteine-tRNA ligase|Cysteinyl-tRNA synthetase, class Ia, DALR|Cysteinyl-tRNA synthetase/mycothiol ligase|Rossmann-like alpha/beta/alpha sandwich fold|tRNA synthetases class I, catalytic domain GO:0000166|GO:0004812|GO:0004817|GO:0005524|GO:0005737|GO:0006418|GO:0006423 G3DSA:1.20.120.640|G3DSA:3.40.50.620|MF_00041|PF01406|PF09190|PR00983|SM00840|SSF47323|SSF52374|TIGR00435 ALFP_RS04895 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003265|IPR011257|IPR023170 DNA glycosylase|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003824|GO:0006281|GO:0006284 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|PF00730|SM00478|SSF48150 ALFP_RS04900 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001095|IPR029045 Acetyl-CoA carboxylase, alpha subunit|ClpP/crotonase-like domain GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|MF_00823|PF03255|PR01069|SSF52096|TIGR00513 ALFP_RS04905 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011063|IPR012094|IPR012795|IPR014729|IPR015262 Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine synthase|tRNA(Ile)-lysidine synthase , substrate-binding domain|tRNA(Ile)-lysidine synthase, N-terminal|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 G3DSA:3.40.50.620|MF_01161|PF01171|PF09179|SSF52402|SSF82829|TIGR02432 ALFP_RS04910 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001048|IPR001341|IPR005260|IPR018042|IPR027795 Aspartate kinase domain|Aspartate kinase, conserved site|Aspartate kinase, monofunctional class|Aspartate/glutamate/uridylate kinase|GATS-like ACT domain GO:0004072|GO:0008652|GO:0009089 G3DSA:3.40.1160.10|PF00696|PF13840|PIRSF000726|PS00324|SSF53633|SSF55021|TIGR00656|TIGR00657 ALFP_RS04925 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001107 Band 7 domain PF01145|SM00244|SSF117892 ALFP_RS04935 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR018060|IPR018062|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|PR00032|PS00041|SM00342|SSF46689 ALFP_RS04940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000132|IPR003010 Carbon-nitrogen hydrolase|Nitrilase/cyanide hydratase, conserved site GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PS00920|PS00921|SSF56317 ALFP_RS04950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001451|IPR011004 Hexapeptide repeat|Trimeric LpxA-like G3DSA:2.160.10.10|PF00132|SSF51161 ALFP_RS04955 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR026045 Ferric binding protein G3DSA:3.40.190.10|PF13343|PIRSF002825|SSF53850 ALFP_RS04960 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS04965 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 ALFP_RS04970 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007698|IPR007886|IPR008143|IPR016040 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2|NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.40.50.1770|G3DSA:3.40.50.720|PF01262|PF05222|PS00837|SM01002|SM01003|SSF51735|SSF52283 ALFP_RS04975 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal PF12769 ALFP_RS04980 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012136|IPR029035 DHS-like NAD/FAD-binding domain|NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 G3DSA:3.40.50.1220|PF02233|PIRSF000204|SSF52467 ALFP_RS05010 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000262|IPR008259|IPR012133|IPR013785 Aldolase-type TIM barrel|Alpha-hydroxy acid dehydrogenase, FMN-dependent|FMN-dependent alpha-hydroxy acid dehydrogenase, active site|FMN-dependent dehydrogenase GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF01070|PIRSF000138|PS00557|SSF51395 ALFP_RS05015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004045|IPR010987|IPR012336|IPR016639 Glutathione S-transferase (GST)|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13409|PF13410|PIRSF015753|SSF47616|SSF52833 ALFP_RS05020 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005025|IPR010089|IPR029039 Flavoprotein WrbA|Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0010181|GO:0016491|GO:0045892 G3DSA:3.40.50.360|MF_01017|PF03358|SSF52218|TIGR01755 ALFP_RS05025 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369 ALFP_RS05030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021719 Proteinase inhibitor I78 PF11720 ALFP_RS05035 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003180|IPR011034 Formyl transferase, C-terminal-like|Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003824|GO:0003905|GO:0006284 G3DSA:3.10.300.10|MF_00527|PF02245|SSF50486|TIGR00567 ALFP_RS05040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001365|IPR006330|IPR028892|IPR032466 Adenine deaminase type 2|Adenosine/AMP deaminase domain|Adenosine/adenine deaminase|Metal-dependent hydrolase GO:0000034|GO:0006146|GO:0019239 G3DSA:3.20.20.140|MF_01962|PF00962|SSF51556|TIGR01430 ALFP_RS05045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006696 Protein of unknown function DUF423 PF04241 ALFP_RS05050 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|G3DSA:3.30.460.20|PF01544|SSF143865|SSF144083 ALFP_RS05055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006089|IPR006091|IPR009075|IPR009100 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0055114 G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PS00073|SSF47203|SSF56645 ALFP_RS05065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000914 Solute-binding protein family 5 domain G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|SSF53850 ALFP_RS05070 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS05075 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS05080 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540 ALFP_RS05085 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009562 Protein of unknown function DUF1178 PF06676|PIRSF032131 ALFP_RS05095 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|SSF53720 ALFP_RS05100 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001670|IPR018211 Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PS00060|PS00913|SSF56796 ALFP_RS05105 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001059|IPR008991|IPR011768|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599 Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2 domain 2|Translation elongation factor P|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain GO:0003746|GO:0005737|GO:0006414|GO:0043043 G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00141|PF01132|PF08207|PF09285|PIRSF005901|PS01275|SM00841|SM01185|SSF50104|SSF50249|TIGR00038 ALFP_RS05110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016633 Uncharacterised conserved protein UCP015557 PF10093|PIRSF015557|TIGR03837 ALFP_RS05115 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021292 Protein of unknown function DUF2863 PF11062 ALFP_RS05120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PF06808 ALFP_RS05125 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 ALFP_RS05130 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018389|IPR026289 Solute binding protein, mannitol/chloroaromatic system-like|TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PIRSF039026 ALFP_RS05135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001030|IPR004406|IPR015928|IPR015929|IPR015931|IPR015932|IPR015933|IPR018136 Aconitase B|Aconitase B, HEAT-like domain|Aconitase B, N-terminal|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/3-isopropylmalate dehydratase, swivel GO:0003994|GO:0005829|GO:0006099|GO:0008152|GO:0051539 G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF06434|PF11791|PIRSF036687|PS00450|SSF52016|SSF53732|SSF74778|TIGR00117 ALFP_RS05140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016181|IPR031165 Acyl-CoA N-acyltransferase|Yjdj-type Gcn5-related N-acetyltransferase G3DSA:3.40.630.30|PF14542|SSF55729 ALFP_RS05150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002020|IPR011278|IPR016142|IPR016143|IPR019810|IPR024176 2-methylcitrate synthase/citrate synthase type I|Citrate synthase|Citrate synthase active site|Citrate synthase, bacterial-type|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain GO:0005737|GO:0006099|GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|PIRSF001369|PR00143|PS00480|SSF48256|TIGR01800 ALFP_RS05155 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012695|IPR015813|IPR018523 2-methylisocitrate lyase|Isocitrate lyase/phosphorylmutase, conserved site|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0008152|GO:0019629|GO:0046421 G3DSA:3.20.20.60|MF_01939|PF13714|PS00161|SSF51621|TIGR02317 ALFP_RS05160 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000014|IPR002078|IPR002197|IPR003593|IPR009057|IPR010524|IPR012704|IPR013656|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|PAS domain|PAS fold-4|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, propionate catabolism activator, N-terminal|Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0005737|GO:0006355|GO:0008134|GO:0019629|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.20|G3DSA:3.40.50.10660|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00158|PF02954|PF06506|PF08448|PR01590|PS00676|PS00688|SM00091|SM00382|SSF159800|SSF46689|SSF52540|SSF55785|TIGR00229|TIGR02329 ALFP_RS05165 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01036|SSF103473 ALFP_RS05170 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 ALFP_RS05175 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001236|IPR001557|IPR010945|IPR015955|IPR016040|IPR022383 L-lactate/malate dehydrogenase|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|Lactate/malate dehydrogenase, C-terminal|Lactate/malate dehydrogenase, N-terminal|Malate dehydrogenase, type 2|NAD(P)-binding domain GO:0003824|GO:0005975|GO:0006108|GO:0016491|GO:0016615|GO:0016616|GO:0019752|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|MF_01517|PF00056|PF02866|PIRSF000102|SSF51735|SSF56327|TIGR01759 ALFP_RS05180 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR011663|IPR011991|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|SM00345|SM00866|SSF46785|SSF64288 ALFP_RS05185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000701|IPR014314 Succinate dehydrogenase, cytochrome b556 subunit|Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0000104|GO:0006099|GO:0016627|GO:0045281 G3DSA:1.20.1300.10|PF01127|PIRSF000178|SSF81343|TIGR02970 ALFP_RS05190 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000701|IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor|Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0000104|GO:0006099|GO:0016021|GO:0016627|GO:0020037 G3DSA:1.20.1300.10|PF01127|PIRSF000169|SSF81343|TIGR02968 ALFP_RS05195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003952|IPR003953|IPR011281|IPR014006|IPR015939|IPR023753|IPR027477|IPR030664 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Fumarate reductase/succinate dehydrogenase, FAD-binding site|Succinate dehydrogenase, flavoprotein subunit|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain|Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit|Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0006099|GO:0016491|GO:0016627|GO:0022900|GO:0050660|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|G3DSA:4.10.80.40|PF00890|PF02910|PIRSF000171|PR00411|PS00504|SSF46977|SSF51905|SSF56425|TIGR01812|TIGR01816 ALFP_RS05200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR004489|IPR009051|IPR012675|IPR017900|IPR025192 2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Alpha-helical ferredoxin|Beta-grasp domain|Succinate dehydogenase/fumarate reductase N-terminal|Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0009055|GO:0016491|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.10.20.30|PF13085|PF13534|PS00198|SSF46548|SSF54292|TIGR00384 ALFP_RS05205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005631 Flavinator of succinate dehydrogenase G3DSA:1.10.150.250|PF03937|SSF109910 ALFP_RS05210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002020|IPR010953|IPR016142|IPR016143|IPR019810|IPR024176 Citrate synthase|Citrate synthase active site|Citrate synthase, bacterial-type|Citrate synthase, type I|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain GO:0004108|GO:0005737|GO:0006099|GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|PIRSF001369|PR00143|PS00480|SSF48256|TIGR01798 ALFP_RS05215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 ALFP_RS05220 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PF02652|TIGR00795 ALFP_RS05225 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002505|IPR012188|IPR012301|IPR012302|IPR016040 Malic enzyme, N-terminal domain|Malic enzyme, NAD-binding|Malic enzyme, phosphate acetyl/butaryl transferase|NAD(P)-binding domain|Phosphate acetyl/butaryl transferase GO:0004471|GO:0004473|GO:0005829|GO:0006108|GO:0008152|GO:0016616|GO:0016746|GO:0030145|GO:0046872|GO:0051287|GO:0055114 G3DSA:3.40.50.10380|G3DSA:3.40.50.10750|G3DSA:3.40.50.720|PF00390|PF01515|PF03949|PIRSF036684|SM00919|SM01274|SSF51735|SSF53223|SSF53659 ALFP_RS05235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001017|IPR005475|IPR011603|IPR029061|IPR031717|IPR032106 2-oxoglutarate dehydrogenase E1 component|2-oxoglutarate dehydrogenase E1 component, N-terminal domain|Dehydrogenase, E1 component|Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal|Thiamin diphosphate-binding fold|Transketolase-like, pyrimidine-binding domain GO:0004591|GO:0006099|GO:0008152|GO:0016624|GO:0030976|GO:0055114 G3DSA:3.40.50.970|PF00676|PF02779|PF16078|PF16870|PIRSF000157|SM00861|SSF52518|TIGR00239 ALFP_RS05240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000089|IPR001078|IPR003016|IPR004167|IPR006255|IPR011053|IPR023213 2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain|Dihydrolipoamide succinyltransferase|E3-binding domain|Single hybrid motif GO:0004149|GO:0006099|GO:0008152|GO:0016746|GO:0045252 G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PS00189|SSF47005|SSF51230|SSF52777|TIGR01347 ALFP_RS05245 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004099|IPR006258|IPR016156|IPR023753 Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004148|GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|SSF51905|SSF55424|TIGR01350 ALFP_RS05250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005654|IPR027417 ATPase, AFG1-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF03969|SSF52540 ALFP_RS05255 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002305|IPR002306|IPR010879|IPR014729|IPR024109 Aminoacyl-tRNA synthetase, class Ic|Domain of unknown function DUF1508|Rossmann-like alpha/beta/alpha sandwich fold|Tryptophan-tRNA ligase|Tryptophan-tRNA ligase, bacterial-type GO:0000166|GO:0004812|GO:0004830|GO:0005524|GO:0005737|GO:0006418|GO:0006436 G3DSA:1.10.240.10|G3DSA:3.40.50.620|MF_00140_B|PF00579|PR01039|SSF160113|SSF52374|TIGR00233 ALFP_RS05260 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001451|IPR011004|IPR018357 Hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like GO:0016740 G3DSA:2.160.10.10|PF00132|PS00101|SSF51161 ALFP_RS05270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003029|IPR006641|IPR010994|IPR012337|IPR012340|IPR018974|IPR022967|IPR023097|IPR023319|IPR023323|IPR032639 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease H-like domain|RuvA domain 2-like|S1 domain|Tex RuvX-like domain|Tex protein, YqgF-like domain|Tex-like domain|Tex-like protein, HTH domain|Tex-like protein, N-terminal|YqgF/RNase H-like domain GO:0003676|GO:0006139 G3DSA:1.10.10.650|G3DSA:1.10.150.310|G3DSA:1.10.3500.10|G3DSA:2.40.50.140|G3DSA:3.30.420.140|PF00575|PF09371|PF12836|PF16921|SM00316|SM00732|SSF158832|SSF47781|SSF50249|SSF53098 ALFP_RS05275 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006555|IPR011545|IPR014001|IPR027417 ATP-dependent helicase, C-terminal|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 G3DSA:3.40.50.300|PF00270|PF13307|SM00487|SM00491|SSF52540 ALFP_RS05285 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|SSF46785 ALFP_RS05290 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008030|IPR016040 NAD(P)-binding domain|NmrA-like domain G3DSA:3.40.50.720|PF05368|SSF51735 ALFP_RS05295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010424|IPR011051|IPR014710 Ethanolamine utilisation EutQ|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF06249|SSF51182 ALFP_RS05300 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|SSF51905 ALFP_RS05305 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480 ALFP_RS05310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component G3DSA:1.20.950.20|PF04290 ALFP_RS05315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 ALFP_RS05320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689 ALFP_RS05325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017689 Outer membrane protein assembly factor BamD MF_00922|PF13525|TIGR03302 ALFP_RS05330 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|PF00849|PF01479|PS01129|SM00363|SSF55120|SSF55174|TIGR00005 ALFP_RS05335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003730|IPR011324 Cytotoxic necrotizing factor-like, catalytic|Multi-copper polyphenol oxidoreductase, laccase G3DSA:3.60.140.10|PF02578|SSF64438|TIGR00726 ALFP_RS05340 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010941|IPR010963|IPR029058 Alpha/Beta hydrolase fold|Poly(R)-hydroxyalkanoic acid synthase, class I|Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0005737|GO:0016746|GO:0042619 G3DSA:3.40.50.1820|PF07167|SSF53474|TIGR01838 ALFP_RS05345 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR011283|IPR016040|IPR020904 Acetoacetyl-CoA reductase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0005737|GO:0016491|GO:0018454|GO:0042619|GO:0055114 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SM00822|SSF51735|TIGR01829 ALFP_RS05350 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007897|IPR010134|IPR012909 PHA accumulation regulator DNA-binding, N-terminal|PHB accumulation regulatory|Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 PF05233|PF07879|TIGR01848 ALFP_RS05355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007434|IPR016181 Acyl-CoA N-acyltransferase|Peptidogalycan biosysnthesis/recognition G3DSA:3.40.630.30|PF04339|SSF55729 ALFP_RS05380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005234|IPR011991 Chromosome segregation/condensation protein ScpB|Winged helix-turn-helix DNA-binding domain GO:0051304 G3DSA:1.10.10.10|PF04079|SSF46785|TIGR00281 ALFP_RS05385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|PF00849|PF01479|PS01149|SM00363|SSF55120|SSF55174|TIGR00093 ALFP_RS05390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003728|IPR028989|IPR028998 Ribosome maturation factor RimP|Ribosome maturation factor RimP, C-terminal|Ribosome maturation factor RimP, N-terminal GO:0042274 G3DSA:2.30.30.180|G3DSA:3.30.300.70|MF_01077|PF02576|SSF74942|SSF75420 ALFP_RS05395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003029|IPR004087|IPR009019|IPR010213|IPR010214|IPR010995|IPR012340|IPR013735|IPR015946|IPR022967|IPR025249|IPR030842 DNA repair Rad51/transcription factor NusA, alpha-helical|K Homology domain|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|KH domain, NusA-like|Nucleic acid-binding, OB-fold|RNA-binding domain, S1|S1 domain|Transcription factor NusA, N-terminal|Transcription termination factor NusA|Transcription termination factor NusA, C-terminal duplication|Transcription termination/antitermination protein NusA, bacterial GO:0000166|GO:0003676|GO:0003700|GO:0003723|GO:0006353|GO:0031554|GO:0031564 G3DSA:1.10.150.20|G3DSA:2.40.50.140|G3DSA:3.30.1480.10|G3DSA:3.30.300.20|MF_00945_B|PF00575|PF08529|PF13184|PF14520|SM00316|SM00322|SSF47794|SSF50249|SSF54814|SSF69705|TIGR01953|TIGR01954 ALFP_RS05400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000178|IPR005225|IPR006847|IPR009000|IPR009061|IPR013575|IPR023115|IPR027417 Initiation factor 2 associated domain, bacterial|P-loop containing nucleoside triphosphate hydrolase|Putative DNA-binding domain|Small GTP-binding protein domain|Translation initiation factor IF- 2, domain 3|Translation initiation factor IF-2, N-terminal|Translation initiation factor aIF-2, bacterial-like|Translation protein, beta-barrel domain GO:0003743|GO:0005525|GO:0005622|GO:0006413 G3DSA:2.40.30.10|G3DSA:3.30.56.50|G3DSA:3.40.50.10050|G3DSA:3.40.50.300|MF_00100_B|PF00009|PF04760|PF08364|PF11987|PS01176|SSF46955|SSF50447|SSF52156|SSF52540|TIGR00231|TIGR00487 ALFP_RS05405 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000238|IPR015946|IPR023799 K homology domain-like, alpha/beta|Ribosome-binding factor A|Ribosome-binding factor A domain GO:0006364 G3DSA:3.30.300.20|MF_00003|PD007327|PF02033|SSF89919|TIGR00082 ALFP_RS05410 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002501|IPR014780|IPR020103|IPR032819 Pseudouridine synthase II, N-terminal|Pseudouridine synthase, catalytic domain|tRNA pseudouridine synthase II, TruB|tRNA pseudouridylate synthase B, C-terminal GO:0001522|GO:0003723|GO:0006396|GO:0009451|GO:0009982 MF_01080|PF01509|PF16198|SSF55120|TIGR00431 ALFP_RS05415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006298|IPR009000|IPR009022|IPR027417|IPR031157 Elongation factor G, III-V domain|GTP-binding protein TypA|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:2.40.50.250|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03144|PR00315|PS00301|SM00838|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01394 ALFP_RS05420 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|SSF51905 ALFP_RS05425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012440 Protein of unknown function DUF1641 PF07849 ALFP_RS05430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 ALFP_RS05435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 ALFP_RS05440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001638|IPR018313 Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF00497|PS01039|SM00062|SSF53850 ALFP_RS05445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005269|IPR031100 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG|LOG family G3DSA:3.40.50.450|PF03641|SSF102405|TIGR00730 ALFP_RS05450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001098|IPR002298|IPR002421|IPR002562|IPR008918|IPR012337|IPR018320|IPR019760|IPR020045|IPR020046|IPR029060 3'-5' exonuclease domain|5'-3' exonuclease, C-terminal domain|5'-3' exonuclease, N-terminal|5'-3' exonuclease, alpha-helical arch, N-terminal|DNA polymerase 1|DNA polymerase A|DNA-directed DNA polymerase, family A, conserved site|DNA-directed DNA polymerase, family A, palm domain|Helix-hairpin-helix motif, class 2|PIN domain-like|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006139|GO:0006260|GO:0006261|GO:0008408 G3DSA:1.10.150.20|G3DSA:1.20.1060.10|G3DSA:3.30.420.10|G3DSA:3.30.70.370|G3DSA:3.40.50.1010|PF00476|PF01367|PF01612|PF02739|PR00868|PS00447|SM00279|SM00474|SM00475|SM00482|SSF47807|SSF53098|SSF56672|SSF88723|TIGR00593 ALFP_RS05455 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 PF02690|SSF109755 ALFP_RS05460 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|PS01117|SM00347|SSF46785 ALFP_RS05465 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004660|IPR005474|IPR009014|IPR029061 2-oxo-acid dehydrogenase E1 component homodimeric type|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase, N-terminal GO:0003824|GO:0008152|GO:0016491|GO:0055114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PIRSF000156|SSF52518|SSF52922|TIGR00759 ALFP_RS05470 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 ALFP_RS05475 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|SSF55729 ALFP_RS05480 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001915|IPR022919 Peptidase M48|Peptidase M48, protease HtpX, putative GO:0004222|GO:0006508 G3DSA:3.30.2010.10|MF_00188|PF01435 ALFP_RS05485 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS05490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001307|IPR001763 Rhodanese-like domain|Thiosulphate sulfurtransferase, conserved site GO:0004792 G3DSA:3.40.250.10|PF00581|PS00380|SM00450|SSF52821 ALFP_RS05495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 G3DSA:1.10.287.1040|MF_00337|PD028235|PF02609|SSF116842|TIGR01280 ALFP_RS05500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000092|IPR008949 Isoprenoid synthase domain|Polyprenyl synthetase GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|SSF48576 ALFP_RS05505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005474|IPR005475|IPR005477|IPR009014|IPR020826|IPR029061|IPR033248 Deoxyxylulose-5-phosphate synthase|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152|GO:0008661|GO:0016114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|MF_00315|PF02779|PF02780|PF13292|PS00801|PS00802|SM00861|SSF52518|SSF52922|TIGR00204 ALFP_RS05510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003801|IPR022838 GTP cyclohydrolase FolE2|GTP cyclohydrolase FolE2/MptA GO:0003933|GO:0003934|GO:0035998 G3DSA:3.10.270.10|MF_01527_B|PF02649 ALFP_RS05515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000529|IPR014717|IPR020814 Ribosomal protein S6|Ribosomal protein S6, plastid/chloroplast|Translation elongation factor EF1B/ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.30.70.60|MF_00360|PF01250|SSF54995|TIGR00166 ALFP_RS05520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012340|IPR023646 Nucleic acid-binding, OB-fold|Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 G3DSA:2.40.50.140|PIRSF003135|SSF50249|TIGR04418 ALFP_RS05525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001648|IPR018275 Ribosomal protein S18|Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.640.10|MF_00270|PD002239|PF01084|PR00974|PS00057|SSF46911|TIGR00165 ALFP_RS05530 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009027|IPR020069|IPR020070|IPR020594 Ribosomal protein L9, C-terminal|Ribosomal protein L9, N-terminal|Ribosomal protein L9, bacteria/chloroplast|Ribosomal protein L9/RNase H1, N-terminal GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.10.430.100|G3DSA:3.40.5.10|MF_00503|PF01281|PF03948|PS00651|SSF55653|SSF55658|TIGR00158 ALFP_RS05535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003593|IPR007692|IPR007693|IPR007694|IPR016136|IPR027417 AAA+ ATPase domain|DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA helicase, DnaB type|DNA helicase, DnaB-like, C-terminal|DNA helicase, DnaB-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003678|GO:0005524|GO:0006260 G3DSA:1.10.860.10|G3DSA:3.40.50.300|PF00772|PF03796|SM00382|SSF48024|SSF52540|TIGR00665 ALFP_RS05540 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016833 Putative sodium bile acid cotransporter PF13593|PIRSF026166 ALFP_RS05545 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005255|IPR024084 4-hydroxythreonine-4-phosphate dehydrogenase PdxA|Isopropylmalate dehydrogenase-like domain GO:0008615|GO:0016616|GO:0050570|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_00536|PF04166|SSF53659|TIGR00557 ALFP_RS05550 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002716|IPR003714|IPR027417|IPR029060 P-loop containing nucleoside triphosphate hydrolase|PIN domain|PIN domain-like|PhoH-like protein GO:0005524 G3DSA:3.40.50.1010|G3DSA:3.40.50.300|PF02562|PF13638|SM00670|SSF52540|SSF88723 ALFP_RS05555 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000866|IPR012336|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PIRSF000239|SSF52833 ALFP_RS05560 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007523 NDUFAF3/Mth938 domain-containing protein G3DSA:3.40.1230.10|PF04430|SSF64076 ALFP_RS05565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383 ALFP_RS05570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001342|IPR002912|IPR005106|IPR016040|IPR016204|IPR019811 ACT domain|Aspartate/homoserine dehydrogenase, NAD-binding|Homoserine dehydrogenase|Homoserine dehydrogenase, catalytic|Homoserine dehydrogenase, conserved site|NAD(P)-binding domain GO:0004412|GO:0006520|GO:0008152|GO:0016491|GO:0016597|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00742|PF01842|PF03447|PIRSF000098|PS01042|SSF51735|SSF55021|SSF55347 ALFP_RS05575 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001926|IPR004450|IPR029144 Threonine synthase, N-terminal|Threonine synthase-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|G3DSA:3.90.1380.10|PF00291|PF14821|SSF53686|TIGR00260 ALFP_RS05580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|SSF55729 ALFP_RS05585 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002937|IPR017830|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain|Squalene-associated FAD-dependent desaturase GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|SSF51905|TIGR03467 ALFP_RS05590 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002060|IPR008949|IPR017828|IPR019845 Isoprenoid synthase domain|Squalene/phytoene synthase|Squalene/phytoene synthase HpnD|Squalene/phytoene synthase, conserved site GO:0009058|GO:0016117|GO:0016740|GO:0016765|GO:0016767 G3DSA:1.10.600.10|PF00494|PS01045|SSF48576|TIGR03465 ALFP_RS05595 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002060|IPR008949|IPR017827 Isoprenoid synthase domain|Squalene synthase HpnC|Squalene/phytoene synthase GO:0009058|GO:0016740 G3DSA:1.10.600.10|PF00494|SSF48576|TIGR03464 ALFP_RS05600 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000821|IPR001608|IPR009006|IPR011079|IPR020622|IPR029066 Alanine racemase|Alanine racemase, C-terminal|Alanine racemase, N-terminal|Alanine racemase, pyridoxal-phosphate attachment site|Alanine racemase/group IV decarboxylase, C-terminal|PLP-binding barrel GO:0003824|GO:0006522|GO:0008784 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01201|PF00842|PF01168|PR00992|PS00395|SM01005|SSF50621|SSF51419|TIGR00492 ALFP_RS05605 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SSF51735 ALFP_RS05610 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003593|IPR004504|IPR008269|IPR014721|IPR020568|IPR027417 AAA+ ATPase domain|DNA repair protein RadA|P-loop containing nucleoside triphosphate hydrolase|Peptidase S16, Lon C-terminal|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003684|GO:0004176|GO:0004252|GO:0005524|GO:0006281|GO:0006508 G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01498|PF05362|PF13481|PR01874|SM00382|SSF52540|SSF54211|TIGR00416 ALFP_RS05615 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 ALFP_RS05620 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010440|IPR011009|IPR022826 3-deoxy-D-manno-octulosonic acid kinase|Lipopolysaccharide kinase|Protein kinase-like domain GO:0005524|GO:0016020|GO:0016773 G3DSA:1.10.510.10|MF_00521|PF06293|SSF56112 ALFP_RS05625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 G3DSA:3.40.190.10|PF13416|PIRSF019574|PR00909|SSF53850 ALFP_RS05630 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR005893|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Spermidine/putrescine ABC transporter, ATP-binding subunit|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0015417|GO:0015846|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540|TIGR01187 ALFP_RS05635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS05640 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS05645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006504|IPR006660|IPR012336 Arsenate reductase-like|Thioredoxin-like fold|Transcriptional regulator Spx/MgsR G3DSA:3.40.30.10|PF03960|SSF52833|TIGR01617 ALFP_RS05650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004788|IPR020672 Ribose 5-phosphate isomerase, type A|Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 G3DSA:3.30.70.260|G3DSA:3.40.50.1360|MF_00170|PF06026|SSF100950|SSF75445|TIGR00021 ALFP_RS05655 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR026022|IPR028366 PhoU domain|Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 G3DSA:1.20.58.220|PF01895|PIRSF003107|SSF109755|TIGR02135 ALFP_RS05660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001633 EAL domain G3DSA:3.20.20.450|PF00563|SM00052|SSF141868 ALFP_RS05665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002645|IPR011547 SLC26A/SulP transporter domain|STAS domain GO:0008272|GO:0015116|GO:0016021 G3DSA:3.30.750.24|PF00916|SSF52091 ALFP_RS05670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007457 Fe(II) trafficking protein YggX GO:0005506 G3DSA:1.10.3880.10|MF_00686|PD029191|PF04362|PIRSF029827|SSF111148 ALFP_RS05675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR001048|IPR010167|IPR016181 Acyl-CoA N-acyltransferase|Amino-acid N-acetyltransferase|Aspartate/glutamate/uridylate kinase|GNAT domain GO:0004042|GO:0005737|GO:0006526|GO:0008080 G3DSA:3.40.1160.10|G3DSA:3.40.630.30|MF_01105|PF00583|PF00696|PIRSF000423|SSF53633|SSF55729|TIGR01890 ALFP_RS05680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001650|IPR003593|IPR007502|IPR010222|IPR011545|IPR011709|IPR014001|IPR024590|IPR027417 AAA+ ATPase domain|DEAD/DEAH box helicase domain|Domain of unknown function DUF1605|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase-associated domain|P-loop containing nucleoside triphosphate hydrolase|RNA helicase HrpA|RNA helicase HrpA, C-terminal GO:0003676|GO:0004004|GO:0004386|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PF04408|PF07717|PF11898|SM00382|SM00487|SM00490|SM00847|SSF52540|TIGR01967 ALFP_RS05685 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003141|IPR004013|IPR004365|IPR004805|IPR011708|IPR012340|IPR016195|IPR029460 Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|DNA polymerase, helix-hairpin-helix motif|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006260|GO:0008408 G3DSA:1.10.150.280|G3DSA:2.40.50.140|G3DSA:3.20.20.140|PF01336|PF02811|PF07733|PF14579|SM00481|SSF89550|TIGR00594 ALFP_RS05690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 ALFP_RS05695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713 ALFP_RS05700 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 ALFP_RS05705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713 ALFP_RS05710 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 ALFP_RS05715 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 ALFP_RS05720 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005358 Putative zinc- or iron-chelating domain containing protein PF03692 ALFP_RS05725 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003848|IPR014729 Domain of unknown function DUF218|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|PF02698 ALFP_RS05730 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 G3DSA:3.40.50.2000|PF01075|SSF53756 ALFP_RS05735 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR011527|IPR011917|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter, lipid A export, MsbA|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0034040|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123|TIGR02203 ALFP_RS05745 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13671|SSF52540 ALFP_RS05750 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004659|IPR012340|IPR019307|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 G3DSA:2.40.50.140|PF10150|SM00316|SSF50249|TIGR00757 ALFP_RS05785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|SSF51905 ALFP_RS05790 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 ALFP_RS05795 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004113|IPR004490|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Glycolate oxidase subunit GlcD|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0008891|GO:0009339|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|SSF55103|SSF56176|TIGR00387 ALFP_RS05800 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006094|IPR016164|IPR016166|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.465.10|PF01565|SSF55103|SSF56176 ALFP_RS05805 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004017|IPR012257|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Cysteine-rich domain|Glycolate oxidase, iron-sulphur subunit G3DSA:1.10.1060.10|PF02754|PF13183|PIRSF000139|PS00198|SSF54862 ALFP_RS05815 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009560 Protein of unknown function DUF1176 PF06674 ALFP_RS05825 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001129|IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain|Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein G3DSA:1.20.120.550|PF01124|SSF161084 ALFP_RS05830 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002549 Transmembrane protein TqsA-like PF01594 ALFP_RS05835 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 PF02690 ALFP_RS05850 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002299|IPR023614 Porin domain|Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 G3DSA:2.40.160.10|PF13609|PR00184|SSF56935 ALFP_RS05860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS05865 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002641|IPR016035|IPR021095 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related|Protein of unknown function DUF3734 GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|PF12536|SSF52151 ALFP_RS05870 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS05875 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 PF03601 ALFP_RS05880 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007360 Invasion gene expression up-regulator, SirB PF04247|PIRSF005610 ALFP_RS05885 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 ALFP_RS05890 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01022|PR00778|SM00418|SSF46785 ALFP_RS05895 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007272 Sulphur transport domain PF04143 ALFP_RS05900 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007272 Sulphur transport domain PF04143 ALFP_RS05905 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000551|IPR009061|IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator|MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0003700|GO:0006355|GO:0045893|GO:0046872 G3DSA:1.10.1660.10|PF13411|PR00040|SM00422|SSF46955|TIGR02047 ALFP_RS05910 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001757|IPR006121|IPR008250|IPR018303|IPR023214|IPR023299|IPR027256 HAD-like domain|Heavy metal-associated domain, HMA|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.30.70.100|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00702|PR00119|PR00941|PS00154|SSF55008|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01525 ALFP_RS05915 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002645|IPR011547 SLC26A/SulP transporter domain|STAS domain GO:0008272|GO:0015116|GO:0016021 G3DSA:3.30.750.24|PF00916|PF01740|SSF52091 ALFP_RS05920 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|SSF56436 ALFP_RS05925 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000917|IPR017849|IPR017850|IPR024607 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal|Sulfatase, conserved site GO:0003824|GO:0008152|GO:0008484 G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|PS00149|SSF53649 ALFP_RS05930 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007829 TM2 domain PF05154 ALFP_RS05935 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000577|IPR005999|IPR018483|IPR018484|IPR018485 Carbohydrate kinase, FGGY|Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal|Carbohydrate kinase, FGGY, conserved site|Glycerol kinase GO:0004370|GO:0005975|GO:0006072|GO:0016773 G3DSA:3.30.420.40|MF_00186|PF00370|PF02782|PIRSF000538|PS00445|SSF53067|TIGR01311 ALFP_RS05940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000447|IPR006076|IPR023753|IPR031656 Alpha-glycerophosphate oxidase, C-terminal|FAD dependent oxidoreductase|FAD-dependent glycerol-3-phosphate dehydrogenase|FAD/NAD(P)-binding domain GO:0004368|GO:0006072|GO:0009331|GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|PF16901|PR01001|PS00978|SSF51905 ALFP_RS05945 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000064 Endopeptidase, NLPC/P60 domain G3DSA:3.90.1720.10|PF00877|SSF54001 ALFP_RS05950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 MF_00725|PD015582|PF05247|SSF63592 ALFP_RS05955 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 MF_01891|PD016592|PF05280|PIRSF003159|SSF160930 ALFP_RS05960 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000540|IPR002898|IPR022522 Flagellar motor protein MotA, conserved site|Flagellar motor stator, MotA|MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PS01307|TIGR03818 ALFP_RS05965 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006665|IPR025713 Motility protein B, N-terminal domain|OmpA-like domain G3DSA:3.30.1330.60|PF00691|PF13677|SSF103088 ALFP_RS05970 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002545|IPR003594|IPR003661|IPR004105|IPR004358|IPR008207|IPR015162 CheW-like domain|CheY binding|Histidine kinase CheA-like, homodimeric domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005737|GO:0006935|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.560|G3DSA:1.20.120.160|G3DSA:2.30.30.40|G3DSA:2.40.50.180|G3DSA:3.30.565.10|G3DSA:3.30.70.400|PF01584|PF01627|PF02518|PF02895|PF09078|PR00344|SM00073|SM00260|SM00387|SM01231|SSF47226|SSF47384|SSF50341|SSF55052|SSF55874 ALFP_RS05975 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 G3DSA:2.30.30.40|G3DSA:2.40.50.180|PF01584|SM00260|SSF50341 ALFP_RS05980 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003122|IPR003660|IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|Chemotaxis methyl-accepting receptor, ligand-binding|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0004888|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF02203|PR00260|SM00283|SM00304|SSF47170|SSF58104 ALFP_RS05985 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000780|IPR022641|IPR022642|IPR026024|IPR029063 Chemotaxis protein methyltransferase CheR|Chemotaxis receptor methyltransferase CheR, N-terminal|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|S-adenosyl-L-methionine-dependent methyltransferase GO:0008757 G3DSA:1.10.155.10|G3DSA:3.40.50.150|PF01739|PF03705|PIRSF000410|PR00996|SM00138|SSF47757|SSF53335 ALFP_RS05990 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000673|IPR001789|IPR008248|IPR011006 CheY-like superfamily|Signal transduction response regulator, chemotaxis, CheB|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 G3DSA:3.40.50.180|G3DSA:3.40.50.2300|MF_00099|PF00072|PF01339|PIRSF000876|SM00448|SSF52172|SSF52738 ALFP_RS05995 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 ALFP_RS06000 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 G3DSA:1.10.287.500|G3DSA:1.20.5.590|PF04344|PIRSF002884|SSF75708 ALFP_RS06005 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006135|IPR006136|IPR029025 Flagellar biosynthetic protein FlhB|Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0015031|GO:0016020|GO:0016021|GO:0044780 G3DSA:3.40.1690.10|PF01312|PR00950|SSF160544|TIGR00328 ALFP_RS06010 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001712|IPR006301|IPR025505 FHIPEP conserved site|Flagellar biosynthesis protein FlhA|Type III secretion system FHIPEP GO:0009306|GO:0016020|GO:0016021|GO:0044780 PF00771|PIRSF005419|PR00949|PS00994|TIGR01398 ALFP_RS06015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000897|IPR003593|IPR020006|IPR027417 AAA+ ATPase domain|Flagellar biosynthesis protein FlhF|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle, SRP54 subunit, GTPase domain GO:0003924|GO:0005525|GO:0006614|GO:0044781 G3DSA:3.40.50.300|PF00448|SM00382|SM00962|SSF52540|TIGR03499 ALFP_RS06020 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012893|IPR012894|IPR017508 HipA, N-terminal subdomain 1|HipA, N-terminal subdomain 2|HipA-like, C-terminal PF07804|PF07805|PF13657|TIGR03071 ALFP_RS06025 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 ALFP_RS06030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007809 FlgN-like protein GO:0005515|GO:0044780 G3DSA:1.20.58.300|PF05130|SSF140566 ALFP_RS06035 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007412|IPR031316 Anti-sigma-28 factor FlgM, C-terminal|Anti-sigma-28 factor, FlgM GO:0045892 PF04316|SSF101498|TIGR03824 ALFP_RS06040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013974|IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal|SAF domain PF13144|SM00858|TIGR03170 ALFP_RS06045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001444|IPR006300|IPR019776 Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PF00460|PIRSF002889|PS00588|TIGR01396 ALFP_RS06050 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001444|IPR006299|IPR010930|IPR019776 Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod protein FlgC|Flagellar basal-body/hook protein, C-terminal domain GO:0030694|GO:0071973 PF00460|PF06429|PS00588|TIGR01395 ALFP_RS06055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005648|IPR025963|IPR025965 Flagellar hook capping protein|FlgD Ig-like domain|FlgD Tudor-like domain PF03963|PF13860|PF13861 ALFP_RS06060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001444|IPR010930|IPR011491|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook protein FlgE GO:0071973 PF00460|PF06429|PF07559|SSF117143|TIGR03506 ALFP_RS06065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001444|IPR010930|IPR012836|IPR019776|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod FlgF|Flagellar basal-body/hook protein, C-terminal domain GO:0030694|GO:0071973 PF00460|PF06429|PS00588|SSF117143|TIGR02490|TIGR03506 ALFP_RS06070 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001444|IPR010930|IPR012834|IPR019776|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod FlgG|Flagellar basal-body/hook protein, C-terminal domain GO:0009426|GO:0071973 PF00460|PF06429|PS00588|SSF117143|TIGR02488|TIGR03506 ALFP_RS06075 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 MF_00415|PF02107|PR01008 ALFP_RS06080 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MF_00416|PF02119|PR01010 ALFP_RS06085 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002901|IPR013377|IPR019301 Flagellar protein FlgJ, N-terminal|Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain|Peptidoglycan hydrolase FlgJ GO:0004040|GO:0016798|GO:0044780 PF01832|PF10135|PR01002|SM00047|TIGR02541 ALFP_RS06090 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001444|IPR002371|IPR010930 Flagellar basal body rod protein, N-terminal|Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780|GO:0071973 PF00460|PF06429|PR01005|SSF64518|TIGR02492 ALFP_RS06095 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001029|IPR013384 Flagellar hook-associated protein 3|Flagellin, D0/D1 domain GO:0005198|GO:0009424|GO:0071973 G3DSA:1.20.1330.10|PF00669|SSF64518|TIGR02550 ALFP_RS06100 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003660|IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PR00260|SM00283|SM00304|SSF58104 ALFP_RS06110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003122|IPR003660|IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|Chemotaxis methyl-accepting receptor, ligand-binding|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0004888|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF02203|PR00260|SM00283|SM00304|SSF47170|SSF58104 ALFP_RS06115 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000595|IPR000644|IPR005105|IPR014710|IPR018490|IPR018821 CBS domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding|Protein-PII uridylyltransferase, N-terminal|RmlC-like jelly roll fold GO:0008773 G3DSA:2.60.120.10|G3DSA:3.10.580.10|PF00027|PF00571|PF03445|PF10335|SM00116|SSF51206|SSF54631 ALFP_RS06120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006054|IPR012337|IPR013520 DNA polymerase III, epsilon subunit|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003887|GO:0006260 G3DSA:3.30.420.10|PF00929|SM00479|SSF53098|TIGR00573 ALFP_RS06125 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002010|IPR006303 Flagellar biosynthesis protein FliR|Type III secretion system inner membrane R protein GO:0006605|GO:0016020|GO:0016021|GO:0044780 PF01311|PR00953|TIGR01400 ALFP_RS06130 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002191|IPR006305 Bacterial export protein family 3|Flagellar biosynthesis protein FliQ GO:0009306|GO:0016020|GO:0016021|GO:0044780 PF01313|PIRSF004669|PR00952|TIGR01402 ALFP_RS06135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005837|IPR005838 Flagellar transport protein FliP|Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PF00813|PR00951|PR01302|PS01060|PS01061|TIGR01103 ALFP_RS06140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 PF04347|TIGR03500 ALFP_RS06145 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001172|IPR001543|IPR012826 Flagellar motor switch FliN|Flagellar motor switch FliN/Type III secretion HrcQb|Surface presentation of antigen (SpoA) GO:0003774|GO:0006935|GO:0009288|GO:0009425|GO:0016020|GO:0071973 G3DSA:2.30.330.10|PF01052|PR00956|SSF101801|TIGR02480 ALFP_RS06150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001543|IPR001689|IPR028976 CheC-like domain|Flagellar motor switch protein FliM|Surface presentation of antigen (SpoA) GO:0003774|GO:0009425|GO:0071973 G3DSA:2.30.330.10|PF01052|PF02154|PIRSF002888|PR00955|SSF101801|SSF103039|TIGR01397 ALFP_RS06155 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PF03748 ALFP_RS06160 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001635|IPR021136 Flagellar hook-length control protein FliK|Flagellar hook-length control protein-like, C-terminal GO:0009424|GO:0044780 PF02120|PR01007 ALFP_RS06165 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012823|IPR018006 Flagellar FliJ, proteobacteria|Flagellar export FliJ GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PF02050|PIRSF019404|PR01004|TIGR02473 ALFP_RS06170 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000194|IPR003593|IPR005714|IPR020003|IPR020005|IPR027417 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|ATPase, type III secretion system, FliI/YscN|Flagellar export ATPase FliI, clade 1|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257|GO:0044780|GO:0071973 G3DSA:3.40.50.300|PF00006|PS00152|SM00382|SSF52540|TIGR01026|TIGR03496 ALFP_RS06175 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000563|IPR018035 Flagellar assembly protein FliH|Flagellar assembly protein FliH/Type III secretion system HrpE GO:0003774|GO:0009288|GO:0071973 PF02108|PR01003 ALFP_RS06180 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000090|IPR011002|IPR023087|IPR028263|IPR032779 Flagellar motor switch protein FliG|Flagellar motor switch protein FliG, C-terminal|Flagellar motor switch protein FliG, N-terminal domain|Flagellar motor switch protein FliG, alpha-helical|Flagellar motor switch protein FliG, middle domain GO:0003774|GO:0006935|GO:0009288|GO:0071973 G3DSA:1.10.220.30|PF01706|PF14841|PF14842|PIRSF003161|PR00954|SSF48029|TIGR00207 ALFP_RS06185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000067|IPR006182|IPR013556 Flagellar M-ring C-terminal|Flagellar M-ring protein FliF|Secretory protein YscJ/FliF GO:0003774|GO:0009431|GO:0071973 PF01514|PF08345|PIRSF004862|PR01009|TIGR00206 ALFP_RS06190 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 MF_00724|PF02049|PR01006|TIGR00205 ALFP_RS06195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006135|IPR029025 Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0016020 G3DSA:3.40.1690.10|PF01312|SSF160544 ALFP_RS06200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021136 Flagellar hook-length control protein-like, C-terminal PF02120 ALFP_RS06205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008622 Flagellar protein FliT G3DSA:1.20.58.380|PF05400 ALFP_RS06210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003713 Flagellar protein FliS GO:0044780 G3DSA:1.20.120.340|PF02561|PIRSF039090|SSF101116|TIGR00208 ALFP_RS06215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003481|IPR010809 Flagellar hook-associated 2, C-terminal|Flagellar hook-associated protein 2, N-terminal GO:0007155|GO:0009288|GO:0009424 PF02465|PF07195 ALFP_RS06220 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005186 FlaG protein G3DSA:3.30.160.170|PF03646|SSF160214 ALFP_RS06225 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000943|IPR007624|IPR007627|IPR007630|IPR011991|IPR012845|IPR013324|IPR013325|IPR014284|IPR016263 RNA polymerase sigma factor, FliA/WhiG|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|RNA polymerase sporulation-specific sigma factor|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0003899|GO:0006351|GO:0006352|GO:0006355|GO:0016987|GO:0030435 G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF04539|PF04542|PF04545|PIRSF000770|PR00046|PS00715|SSF88659|SSF88946|TIGR02479|TIGR02937 ALFP_RS06230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011990|IPR019734|IPR027417|IPR029063 P-loop containing nucleoside triphosphate hydrolase|S-adenosyl-L-methionine-dependent methyltransferase|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.50.150|G3DSA:3.40.50.300|PF13469|PF13489|PF14559|SM00028|SSF48452|SSF52540|SSF53335 ALFP_RS06235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001029|IPR001492 Flagellin|Flagellin, D0/D1 domain GO:0005198|GO:0009420|GO:0071973 G3DSA:1.20.1330.10|PF00669|PF00700|PR00207|SSF64518 ALFP_RS06240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008557 Protein of unknown function DUF839 PF05787 ALFP_RS06250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009216 Virulence factor SrfB G3DSA:3.30.420.40|PF07520|PIRSF034585 ALFP_RS06255 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017030 Virulence effector, SrfC PF10139 ALFP_RS06265 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF00092|SSF53300 ALFP_RS06270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 ALFP_RS06275 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687 ALFP_RS06280 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|SSF56436 ALFP_RS06295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002035 von Willebrand factor, type A PF13519|PR01217|SSF53300 ALFP_RS06300 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007383|IPR015893 Protein of unknown function DUF445|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF04286 ALFP_RS06305 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000014|IPR003660|IPR004089|IPR004090|IPR013655 Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|PAS domain|PAS fold-3 GO:0004871|GO:0005515|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF00672|PF08447|PR00260|SM00283|SSF55785|SSF58104|TIGR00229 ALFP_RS06310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000014|IPR003660|IPR004089|IPR004090|IPR013655 Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|PAS domain|PAS fold-3 GO:0004871|GO:0005515|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF00672|PF08447|PR00260|SM00091|SM00283|SM00304|SSF55785|SSF58104|TIGR00229 ALFP_RS06315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011213|IPR011991|IPR015797 NUDIX hydrolase domain-like|Nicotinic acid mononucleotide biosynthesis protein|Winged helix-turn-helix DNA-binding domain GO:0016787 G3DSA:1.10.10.10|G3DSA:3.90.79.10|PIRSF019423|SSF46785|SSF55811 ALFP_RS06320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002638|IPR004393|IPR013785|IPR022412|IPR027277 Aldolase-type TIM barrel|Nicotinate-nucleotide pyrophosphorylase|Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD|Quinolinate phosphoribosyl transferase, C-terminal|Quinolinate phosphoribosyl transferase, N-terminal GO:0003824|GO:0004514|GO:0009435|GO:0016763|GO:0019363 G3DSA:3.20.20.70|G3DSA:3.90.1170.20|PF01729|PF02749|PIRSF006250|SSF51690|SSF54675|TIGR00078 ALFP_RS06325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS06335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PF02447 ALFP_RS06345 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002560|IPR029261 Transposase IS204/IS1001/IS1096/IS1165, DDE domain|Transposase IS204/IS1001/IS1096/IS1165, zinc-finger PF01610|PF14690 ALFP_RS06350 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 ALFP_RS06360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|SSF53850 ALFP_RS06365 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS06370 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000917|IPR017849|IPR017850|IPR024607 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal|Sulfatase, conserved site GO:0003824|GO:0008152|GO:0008484 G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|PS00149|PS00523|SSF53649 ALFP_RS06375 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS06380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 ALFP_RS06385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|G3DSA:3.30.70.1440|PF00873|PR00702|SSF82693|SSF82714|SSF82866|TIGR00915 ALFP_RS06390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|G3DSA:2.20.200.10|PF02321|SSF56954|TIGR01845 ALFP_RS06395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001638|IPR010068|IPR015168 Periplasmic binding protein TauA|Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like GO:0015734|GO:0042597 G3DSA:3.40.190.10|PF09084|SM00062|SSF53850|TIGR01729 ALFP_RS06400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS06405 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS06410 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|SSF51735 ALFP_RS06415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS06420 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 ALFP_RS06425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR020556|IPR023631 Amidase signature domain|Amidase, conserved site G3DSA:3.90.1300.10|PF01425|PS00571|SSF75304 ALFP_RS06430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|SSF53850 ALFP_RS06435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 ALFP_RS06440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 ALFP_RS06445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004624|IPR013987|IPR013988 PhnA protein|PhnA protein, C-terminal|PhnA protein, N-terminal G3DSA:2.20.25.10|G3DSA:2.30.30.40|PF03831|PF08274|SSF57783|SSF82057|TIGR00686 ALFP_RS06450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018389|IPR026289 Solute binding protein, mannitol/chloroaromatic system-like|TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PIRSF039026 ALFP_RS06455 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 ALFP_RS06460 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 ALFP_RS06465 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002293|IPR004840|IPR004841 Amino acid permease, conserved site|Amino acid permease/ SLC12A domain|Amino acid/polyamine transporter I GO:0003333|GO:0006810|GO:0006865|GO:0015171|GO:0016020|GO:0016021|GO:0055085 PF00324|PIRSF006060|PS00218 ALFP_RS06470 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001763|IPR032816 Rhodanese-like domain|SNARE associated Golgi protein G3DSA:3.40.250.10|PF00581|PF09335|SM00450|SSF52821 ALFP_RS06475 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR032808 DoxX family PF07681 ALFP_RS06480 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS06485 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS06490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009739 Protein of unknown function DUF1311 PD498860|PF07007 ALFP_RS06495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000425|IPR022357|IPR023271|IPR023743 Aquaporin Z|Aquaporin-like|Major intrinsic protein|Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0006833|GO:0015250|GO:0016020|GO:0016021|GO:0055085 G3DSA:1.20.1080.10|MF_01146|PF00230|PR00783|PS00221|SSF81338|TIGR00861 ALFP_RS06500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021762 Protein of unknown function DUF3325 PF11804 ALFP_RS06505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR022109 Protein of unknown function DUF3649 PF12365 ALFP_RS06510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005625 PepSY-associated TM protein PF03929 ALFP_RS06515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009827 Dicarboxylate carrier MatC N-terminal PF07158 ALFP_RS06520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 ALFP_RS06525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007272 Sulphur transport domain PF04143 ALFP_RS06530 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015323|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 G3DSA:3.50.50.60|G3DSA:3.90.760.10|PF07992|PF09242|SSF51905|SSF55424 ALFP_RS06535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|SSF46626 ALFP_RS06540 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013783|IPR014756|IPR014880|IPR030995 Immunoglobulin E-set|Immunoglobulin-like fold|Sulphur oxidation protein SoxZ|Thiosulfate oxidation carrier complex protein SoxZ G3DSA:2.60.40.10|PF08770|SSF81296|TIGR04490 ALFP_RS06545 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016568|IPR032711 Ig-like SoxY domain|Sulphur oxidation, SoxY PF13501|PIRSF010312 ALFP_RS06550 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|SSF51905 ALFP_RS06555 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 ALFP_RS06560 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003594|IPR003661|IPR004358|IPR013727 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Two-component sensor kinase, N-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PF08521|PR00344|SM00387|SM00388|SSF47384|SSF55874 ALFP_RS06565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172 ALFP_RS06570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000883|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 G3DSA:1.20.210.10|PF00115|SSF81442 ALFP_RS06575 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003468|IPR009056 Cytochrome c oxidase, monohaem subunit/FixO|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF02433|SSF46626 ALFP_RS06580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626 ALFP_RS06585 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626 ALFP_RS06590 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 ALFP_RS06595 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 ALFP_RS06600 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 ALFP_RS06605 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010105|IPR011662|IPR012910 Secretin/TonB, short N-terminal domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07660|PF07715|SM00965|SSF56935|TIGR01783 ALFP_RS06610 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006860|IPR012373|IPR032508|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal|Protein FecR, C-terminal PF04773|PF16220|PF16344|PIRSF018266 ALFP_RS06615 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 ALFP_RS06620 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR024169 Aminotransferase class V domain|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF000524|SSF53383 ALFP_RS06625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003423|IPR028351 Cyclolysin transport protein CyaE|Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PIRSF001892|SSF56954 ALFP_RS06630 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PF01914|TIGR00427 ALFP_RS06635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 ALFP_RS06640 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004705|IPR006153 Cation/H+ exchanger|Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021|GO:0055085 PF00999|TIGR00831 ALFP_RS06645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR031381 Uncharacterised protein YtcA PF17090 ALFP_RS06650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain G3DSA:2.40.50.100|PF16576|SSF111369 ALFP_RS06655 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PF04632 ALFP_RS06660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00860 ALFP_RS06665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006383|IPR006385|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IB, PSPase-like|HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial GO:0008152|GO:0016791 G3DSA:3.40.50.1000|PF12710|SSF56784|TIGR01488|TIGR01490 ALFP_RS06670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005325 Protein of unknown function DUF308, membrane PF03729 ALFP_RS06675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007410 DR1885-like metal-binding protein PF04314|SSF110087 ALFP_RS06680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003782|IPR012336 Copper chaperone SCO1/SenC|Thioredoxin-like fold G3DSA:3.40.30.10|PF02630|SSF52833 ALFP_RS06690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002932|IPR013785|IPR024188|IPR027283 Aldolase-type TIM barrel|Glutamate synthase domain|Glutamate synthase large subunit-like protein|Glutamate synthase large subunit-like protein, bacteria GO:0003824|GO:0006537|GO:0015930|GO:0016638|GO:0055114 G3DSA:3.20.20.70|PF01645|PIRSF006429|PIRSF500060|SSF51395 ALFP_RS06695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PF04632 ALFP_RS06700 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PS01117|SM00347|SSF46785 ALFP_RS06705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008136 CinA, C-terminal G3DSA:3.90.950.20|PF02464|SSF142433|TIGR00199 ALFP_RS06710 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000573|IPR001030|IPR006249|IPR015928|IPR015931|IPR015932 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/Iron-responsive element-binding protein 2 GO:0008152 G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF00694|PR00415|SSF52016|SSF53732|TIGR01341 ALFP_RS06715 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 ALFP_RS06720 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007400 PrpF protein G3DSA:3.10.310.10|PF04303|SSF54506 ALFP_RS06725 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR018060|IPR018062 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|PS00041|SM00342|SSF46689 ALFP_RS06730 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 ALFP_RS06735 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001663|IPR015879|IPR017941 Aromatic-ring-hydroxylating dioxygenase, alpha subunit|Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0006725|GO:0016491|GO:0016708|GO:0019439|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|PR00090|SSF50022|SSF55961 ALFP_RS06740 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000391|IPR032710 NTF2-like domain|Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 G3DSA:3.10.450.50|PF00866|SSF54427 ALFP_RS06745 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 ALFP_RS06750 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 ALFP_RS06755 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|SSF51905 ALFP_RS06760 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006685|IPR010920|IPR011014|IPR011066|IPR022249 Domain of unknown function DUF3772|LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PF12607|SSF50182|SSF82689|SSF82861 ALFP_RS06765 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006685|IPR010920|IPR011014|IPR011066 LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|SSF50182|SSF82689|SSF82861 ALFP_RS06770 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005828|IPR005829|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PS00216|PS00217|SSF103473 ALFP_RS06775 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000192|IPR015421|IPR015422|IPR015424 Aminotransferase class V domain|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|SSF53383 ALFP_RS06780 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023393 START-like domain G3DSA:3.30.530.20|SSF55961 ALFP_RS06785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001387|IPR010982|IPR011051|IPR013096|IPR014710 Cro/C1-type helix-turn-helix domain|Cupin 2, conserved barrel|Lambda repressor-like, DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF01381|PF07883|SM00530|SSF47413|SSF51182 ALFP_RS06790 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR003607|IPR006674|IPR011006 CheY-like superfamily|HD domain|HD/PDEase domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:1.10.3210.10|G3DSA:3.40.50.2300|PF00072|PF01966|SM00448|SM00471|SSF109604|SSF52172 ALFP_RS06795 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR005330|IPR008207|IPR011006|IPR013767 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|MHYT domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00989|PF01627|PF02518|PF03707|PR00344|SM00091|SM00387|SM00388|SM00448|SSF47226|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 ALFP_RS06800 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000644|IPR006667|IPR006668|IPR006669 CBS domain|Magnesium transporter MgtE|Magnesium transporter, MgtE intracellular domain|SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324|GO:0015095|GO:0015693|GO:0016020 G3DSA:1.10.357.20|G3DSA:1.25.60.10|G3DSA:3.10.580.10|PF00571|PF01769|PF03448|SM00116|SM00924|SSF158791|SSF161093|SSF54631|TIGR00400 ALFP_RS06810 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004670|IPR023171 Na+/H+ antiporter NhaA|Na/H antiporter domain GO:0006814|GO:0006885|GO:0016021 G3DSA:1.20.1530.10|MF_01844|PF06965|TIGR00773 ALFP_RS06815 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003732|IPR023509 D-Tyr tRNAtyr deacylase-like domain|D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 G3DSA:3.50.80.10|MF_00518|PF02580|SSF69500|TIGR00256 ALFP_RS06820 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000390 Small multidrug resistance protein family GO:0016021 PF00893|SSF103481 ALFP_RS06825 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR032816 SNARE associated Golgi protein PF09335 ALFP_RS06830 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 ALFP_RS06835 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023006|IPR032710 NTF2-like domain|Uncharacterised protein family UPF0225 G3DSA:3.10.450.50|MF_00612|SSF54427 ALFP_RS06840 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435 ALFP_RS06845 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS06860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic PD052090 ALFP_RS06870 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 ALFP_RS06875 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005220 Bacterial OB-fold G3DSA:2.40.50.200|PF04076|SSF101756 ALFP_RS06880 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007437 Putative member of DMT superfamily PF04342|PIRSF021239|SSF103481 ALFP_RS06885 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005184|IPR025485 Domain of unknown function DUF306, Meta/HslJ|Domain of unknown function DUF4377 PF03724|PF14302 ALFP_RS06890 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007486|IPR029024 Inner membrane protein YebE|TerB-like G3DSA:1.10.3680.10|PF04391|SSF158682 ALFP_RS06895 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 ALFP_RS06900 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR024997 Protein of unknown function DUF3892 PF13031 ALFP_RS06905 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012337|IPR013520|IPR024530 Exonuclease, RNase T/DNA polymerase III|Putative quorum-sensing-regulated virulence factor|Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|PF00929|PF12843|SM00479|SSF53098 ALFP_RS06910 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|SM00267|SSF55073|TIGR00254 ALFP_RS06920 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005302|IPR005303 MOSC, N-terminal beta barrel|Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PF03473|PF03476|SSF141673 ALFP_RS06925 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PS00519|SM00344|SSF46785|SSF54909 ALFP_RS06930 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000277|IPR006233|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Cystathionine beta-lyase, bacterial|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004121|GO:0005737|GO:0006520|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|SSF53383|TIGR01324 ALFP_RS06940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000086|IPR015797|IPR020084 NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PS00893|SSF55811 ALFP_RS06945 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007401 Protein of unknown function DUF454 PF04304|PIRSF016789 ALFP_RS06950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003779|IPR004675|IPR010195|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like|Uncharacterised peroxidase-related GO:0051920|GO:0055114 G3DSA:1.20.1290.10|G3DSA:1.20.5.810|PF02627|SSF69118|TIGR00778|TIGR01926 ALFP_RS06955 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001518|IPR014729|IPR018223|IPR023437|IPR024073|IPR024074 Argininosuccinate synthase|Argininosuccinate synthase, conserved site|Argininosuccinate synthase, type 2 subfamily|Argininosuccinate synthetase mutimerisation domain, C-terminal tail|Argininosuccinate synthetase, catalytic/multimerisation domain body|Rossmann-like alpha/beta/alpha sandwich fold GO:0004055|GO:0005524|GO:0006526|GO:0042803 G3DSA:1.10.287.400|G3DSA:3.40.50.620|G3DSA:3.90.1260.10|MF_00581|PF00764|PS00564|PS00565|SSF52402|SSF69864|TIGR00032 ALFP_RS06960 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004843|IPR026575|IPR029052 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA|Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0004115|GO:0016787 G3DSA:3.60.21.10|MF_00905|PF00149|SSF56300 ALFP_RS06965 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 ALFP_RS06970 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS06975 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS06980 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic G3DSA:3.40.190.10|PF13343|SSF53850 ALFP_RS06985 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000843|IPR010982|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PS00356|SM00354|SSF47413|SSF53822 ALFP_RS06990 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 PF09604|TIGR02115 ALFP_RS06995 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 MF_00275|PF03814|PIRSF001294|TIGR00680 ALFP_RS07000 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 MF_00276|PF02669|PIRSF001296|TIGR00681 ALFP_RS07005 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001757|IPR006391|IPR008250|IPR018303|IPR023214|IPR023299 HAD-like domain|P-type ATPase|P-type ATPase, A domain|P-type ATPase, B chain, subfamily IA|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site GO:0000166|GO:0005524|GO:0006813|GO:0008556|GO:0016021|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|MF_00285|PF00122|PF00702|PR00119|PS00154|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01497 ALFP_RS07010 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003594|IPR003661|IPR003852|IPR004358|IPR006016|IPR014729|IPR025201|IPR027417 Histidine kinase-like ATPase, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Rossmann-like alpha/beta/alpha sandwich fold|Sensor protein KdpD, transmembrane domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal|Signal transduction histidine kinase-related protein, C-terminal|UspA GO:0000155|GO:0000160|GO:0004673|GO:0006950|GO:0007165|GO:0016020|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.620|G3DSA:3.30.565.10|G3DSA:3.40.50.300|G3DSA:3.40.50.620|PF00512|PF00582|PF02518|PF02702|PF13493|PR00344|SM00387|SM00388|SSF47384|SSF52402|SSF55874 ALFP_RS07015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 ALFP_RS07020 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002292|IPR006130|IPR006131|IPR006132|IPR024904 Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding|Ornithine carbamoyltransferase|Ornithine/putrescine carbamoyltransferase GO:0004585|GO:0006520|GO:0006591|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_01109|PF00185|PF02729|PR00100|PR00102|PS00097|SSF53671|TIGR00658 ALFP_RS07025 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021969 Protein of unknown function DUF3579 PF12112 ALFP_RS07030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006139|IPR006140|IPR016040|IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00065|SSF51735|SSF52283 ALFP_RS07035 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.58.110|MF_00500|PD004231|PF01649|SSF46992|TIGR00029 ALFP_RS07040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004268 Peptidoglycan biosynthesis protein MurJ PF03023|PIRSF002869|PR01806|TIGR01695 ALFP_RS07045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SSF51735 ALFP_RS07050 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000850|IPR006259|IPR007862|IPR027417 Adenylate kinase subfamily|Adenylate kinase, active site lid domain|Adenylate kinase/UMP-CMP kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004017|GO:0005524|GO:0006139|GO:0016776|GO:0019205 G3DSA:3.40.50.300|MF_00235|PF00406|PF05191|PR00094|PS00113|SSF52540|TIGR01351 ALFP_RS07055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003329|IPR004528|IPR029044 3-deoxy-D-manno-octulosonate cytidylyltransferase|Acylneuraminate cytidylyltransferase|Nucleotide-diphospho-sugar transferases GO:0005737|GO:0008690 G3DSA:3.90.550.10|MF_00057|PF02348|SSF53448|TIGR00466 ALFP_RS07060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005651 Uncharacterised protein family UPF0434/Trm112 G3DSA:2.20.25.10|MF_01187|PF03966|SSF158997 ALFP_RS07065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003758|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 G3DSA:3.40.50.300|MF_00409|PF02606|SSF52540|TIGR00682 ALFP_RS07070 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472 ALFP_RS07075 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618 ALFP_RS07080 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003753|IPR020579|IPR025824 Exonuclease VII, large subunit|Exonuclease VII, large subunit, C-terminal|OB-fold nucleic acid binding domain GO:0003676|GO:0006308|GO:0008855|GO:0009318 MF_00378|PF02601|PF13742|TIGR00237 ALFP_RS07085 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001189|IPR019831|IPR019832|IPR019833 Manganese/iron superoxide dismutase|Manganese/iron superoxide dismutase, C-terminal|Manganese/iron superoxide dismutase, N-terminal|Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 G3DSA:1.10.287.990|PF00081|PF02777|PIRSF000349|PR01703|PS00088|SSF46609|SSF54719 ALFP_RS07090 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002024|IPR008331|IPR009078|IPR012347 Bacterioferritin|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006826|GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|PIRSF002560|PR00601|PS00549|SSF47240|TIGR00754 ALFP_RS07095 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002155|IPR012793|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617 Beta-ketoadipyl CoA thiolase|Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747|GO:0019619 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|SSF53901|TIGR01930|TIGR02430 ALFP_RS07100 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003795 Protein of unknown function DUF192 PF02643 ALFP_RS07105 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 ALFP_RS07110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003769|IPR014719|IPR022935 ATP-dependent Clp protease adaptor protein ClpS|Adaptor protein ClpS, core|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like GO:0030163 G3DSA:3.30.1390.10|MF_00302|PF02617|SSF54736 ALFP_RS07115 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR013461|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATP-dependent Clp protease ATP-binding subunit ClpA|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0004176|GO:0005524|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|SM00382|SM01086|SSF52540|SSF81923|TIGR02639 ALFP_RS07120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007498 Paraquat-inducible protein A PF04403 ALFP_RS07125 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003399 Mce/MlaD PF02470 ALFP_RS07130 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005586 ABC-type transport auxiliary lipoprotein component G3DSA:3.40.50.10610|PF03886|SSF159594 ALFP_RS07135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002872|IPR005933|IPR010985|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR024082|IPR024089|IPR024090|IPR025703|IPR029041 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase|Bifunctional protein PutA|Delta-1-pyrroline-5-carboxylate dehydrogenase 3|FAD-linked oxidoreductase-like|Proline dehydrogenase PutA, domain I|Proline dehydrogenase PutA, domain I/II|Proline dehydrogenase PutA, domain II|Proline dehydrogenase domain|Ribbon-helix-helix GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0006561|GO:0008152|GO:0010133|GO:0016491|GO:0016620|GO:0055114 G3DSA:1.10.2060.10|G3DSA:1.20.5.550|G3DSA:3.20.20.220|G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PF01619|PF14850|PIRSF000197|PS00070|SSF47598|SSF51730|SSF53720|SSF81935|TIGR01238 ALFP_RS07140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 ALFP_RS07145 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS07150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS07155 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PS00211|SM00382|SSF52540 ALFP_RS07160 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030660|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|High-affinity branched-chain amino acid transport ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015658|GO:0015803|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PIRSF039137|PS00211|SM00382|SSF52540 ALFP_RS07175 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023292 NTP pyrophosphohydrolase-like domain G3DSA:1.10.3420.10 ALFP_RS07180 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|SSF52317 ALFP_RS07185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010286|IPR016909|IPR029063 Ribosomal RNA large subunit methyltransferase F|Ribosomal RNA large subunit methyltransferase F-like|S-adenosyl-L-methionine-dependent methyltransferase GO:0005737|GO:0006364|GO:0008168|GO:0008988 G3DSA:3.40.50.150|MF_01848|PF05971|PIRSF029038|SSF53335 ALFP_RS07190 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008180|IPR008181|IPR029054 Deoxyuridine triphosphate nucleotidohydrolase|Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase|dUTPase-like GO:0004170|GO:0016787|GO:0046080 G3DSA:2.70.40.10|MF_00116|PF00692|SSF51283|TIGR00576 ALFP_RS07195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003382|IPR005252|IPR007085 Coenzyme A biosynthesis bifunctional protein CoaBC|DNA/pantothenate metabolism flavoprotein, C-terminal|Flavoprotein GO:0003824|GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 G3DSA:3.40.50.10300|G3DSA:3.40.50.1950|PF02441|PF04127|SSF102645|SSF52507|TIGR00521 ALFP_RS07200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MF_00161|PF01252|PR00781|PS00855|TIGR00077 ALFP_RS07205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001412|IPR002300|IPR002301|IPR009008|IPR009080|IPR010663|IPR013155|IPR014729|IPR023585 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Isoleucine-tRNA ligase|Isoleucine-tRNA ligase, type 1|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|Zinc finger, FPG/IleRS-type GO:0000166|GO:0002161|GO:0004812|GO:0004822|GO:0005524|GO:0005737|GO:0006418|GO:0006428 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02002|PF00133|PF06827|PF08264|PR00984|PS00178|SSF47323|SSF50677|SSF52374|TIGR00392 ALFP_RS07210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002606|IPR014729|IPR015864|IPR015865|IPR023465 FAD synthetase|Riboflavin kinase domain|Riboflavin kinase domain, bacterial/eukaryotic|Riboflavin kinase, bacterial|Rossmann-like alpha/beta/alpha sandwich fold GO:0003919|GO:0008531|GO:0009231 G3DSA:2.40.30.30|G3DSA:3.40.50.620|PF01687|PF06574|PIRSF004491|SM00904|SSF52374|SSF82114|TIGR00083 ALFP_RS07215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002376|IPR004607 Formyl transferase, N-terminal|Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189|GO:0009058|GO:0016742 G3DSA:3.40.50.170|MF_01930|PF00551|SSF53328|TIGR00639 ALFP_RS07220 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001678|IPR023267|IPR029063 RNA (C5-cytosine) methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase|SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 G3DSA:3.30.70.1170|G3DSA:3.40.50.150|PF01189|PR02008|SSF53335 ALFP_RS07225 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005804 Fatty acid desaturase domain GO:0006629 PF00487 ALFP_RS07230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013986|IPR014016|IPR014017|IPR027417 DExx box DNA helicase domain|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0005524|GO:0016787 G3DSA:1.10.10.160|G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF13361|SSF52540 ALFP_RS07235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000572|IPR005066|IPR008335|IPR014756 Eukaryotic molybdopterin oxidoreductase|Immunoglobulin E-set|Moybdenum cofactor oxidoreductase, dimerisation|Oxidoreductase, molybdopterin-binding domain GO:0016491|GO:0030151|GO:0042128|GO:0055114 G3DSA:2.60.40.650|G3DSA:3.90.420.10|PF00174|PF03404|PR00407|SSF56524|SSF81296 ALFP_RS07240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008168|IPR009056 Cytochrome c, class IC|Cytochrome c-like domain GO:0005506|GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PR00605|SSF46626 ALFP_RS07245 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018946|IPR029052 Alkaline phosphatase D-related|Metallo-dependent phosphatase-like PF09423|SSF56300 ALFP_RS07255 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR003012|IPR004111|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR|Tetracycline transcriptional regulator, TetR, C-terminal|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677|GO:0045892|GO:0046677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF02909|PR00400|PR00455|PS01081|SSF46689|SSF48498 ALFP_RS07260 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF00529|PF16576|SSF111369 ALFP_RS07265 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS07270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025421 Protein of unknown function DUF4148 PF13663 ALFP_RS07275 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS07280 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689 ALFP_RS07285 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|SM00382|SSF52540 ALFP_RS07290 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002052|IPR004556|IPR007848|IPR017127|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|Modification methylase HemK|Ribosomal protein L3-specific, glutamine-N5-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0005622|GO:0006479|GO:0008168|GO:0008276|GO:0009007|GO:0032259|GO:0032775 G3DSA:1.10.8.10|G3DSA:3.40.50.150|MF_02125|PF05175|PIRSF037167|PS00092|SSF53335|TIGR00536|TIGR03533 ALFP_RS07295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001261|IPR002933|IPR005941|IPR011650 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0006508|GO:0008152|GO:0008237|GO:0009014|GO:0009089|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|MF_01690|PF01546|PF07687|PS00759|SSF53187|SSF55031|TIGR01246 ALFP_RS07300 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001451|IPR005664|IPR011004|IPR018357|IPR023180 Hexapeptide repeat|Hexapeptide transferase, conserved site|Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family|Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1|Trimeric LpxA-like GO:0008666|GO:0009089|GO:0016740 G3DSA:1.10.166.10|G3DSA:2.160.10.10|MF_00811|PF00132|PF14602|PF14805|PS00101|SSF51161|TIGR00965 ALFP_RS07310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR011051|IPR014710|IPR018060|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF02311|PF12833|PR00032|SM00342|SSF46689|SSF51182 ALFP_RS07315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 ALFP_RS07320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004680|IPR006037|IPR031312 Citrate transporter-like domain|Regulator of K+ conductance, C-terminal|Sodium/sulphate symporter, conserved site GO:0006813|GO:0008324|GO:0016021|GO:0055085 G3DSA:3.30.70.1450|PF02080|PF03600|PS01271|SSF116726 ALFP_RS07325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369 ALFP_RS07335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009468 Protein of unknown function DUF1090 PF06476|SSF58100 ALFP_RS07340 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001604|IPR020821 DNA/RNA non-specific endonuclease|Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 G3DSA:3.40.570.10|PF01223|SM00477|SM00892|SSF54060 ALFP_RS07355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PF01758 ALFP_RS07360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003211 AmiS/UreI transporter GO:0006810|GO:0016020 PF02293 ALFP_RS07365 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000551|IPR009061|IPR010211 MerR-type HTH domain|Putative DNA-binding domain|Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 G3DSA:1.10.1660.10|PF13411|PR00040|PS00552|SM00422|SSF46955|TIGR01950 ALFP_RS07370 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS07380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 ALFP_RS07385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001179|IPR005215|IPR008880|IPR008881|IPR027304 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Trigger factor|Trigger factor, C-terminal|Trigger factor, ribosome-binding, bacterial|Trigger factor/SurA domain GO:0006457|GO:0015031 G3DSA:1.10.3120.10|G3DSA:3.10.50.40|G3DSA:3.30.70.1050|MF_00303|PF00254|PF05697|PF05698|PIRSF003095|SSF102735|SSF109998|SSF54534|TIGR00115 ALFP_RS07390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001907|IPR023562|IPR029045|IPR033135 ATP-dependent Clp protease proteolytic subunit|Clp protease proteolytic subunit /Translocation-enhancing protein TepA|ClpP, histidine active site|ClpP/crotonase-like domain GO:0004252|GO:0006508 G3DSA:3.90.226.10|MF_00444|PF00574|PR00127|PS00382|SSF52096|TIGR00493 ALFP_RS07395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003593|IPR003959|IPR004487|IPR010603|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp protease, ATP-binding subunit ClpX|P-loop containing nucleoside triphosphate hydrolase|Zinc finger, ClpX C4-type GO:0005524|GO:0006457|GO:0008270|GO:0046983|GO:0051082 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00175|PF06689|PF07724|PF10431|SM00382|SM00994|SM01086|SSF52540|SSF57716|TIGR00382 ALFP_RS07400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003111|IPR003593|IPR003959|IPR004815|IPR008268|IPR008269|IPR014721|IPR015947|IPR020568|IPR027417|IPR027543 AAA+ ATPase domain|ATP-dependent protease La (LON), substrate-binding domain|ATPase, AAA-type, core|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|P-loop containing nucleoside triphosphate hydrolase|PUA-like domain|Peptidase S16, Lon C-terminal|Peptidase S16, active site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 G3DSA:1.10.8.60|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PS01046|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763 ALFP_RS07410 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006197|IPR006199|IPR006200|IPR011991|IPR015927|IPR019759|IPR028360 LexA repressor, DNA-binding domain|Peptidase S24, LexA-like|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Transcription regulator LexA|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0004252|GO:0006355|GO:0006508|GO:0009432|GO:0045892 G3DSA:1.10.10.10|G3DSA:2.10.109.10|MF_00015|PF00717|PF01726|PR00726|SSF46785|SSF51306|TIGR00498 ALFP_RS07415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|SSF55729 ALFP_RS07420 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000796|IPR004838|IPR004839|IPR015421|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Aspartate/other aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824|GO:0006520|GO:0008483|GO:0009058|GO:0030170 G3DSA:3.40.640.10|PF00155|PR00799|PS00105|SSF53383 ALFP_RS07425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001650|IPR001943|IPR004807|IPR006935|IPR014001|IPR024759|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|UVR domain|UvrABC system, subunit B|UvrB, YAD/RRR-motif-containing domain GO:0003677|GO:0005515|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432|GO:0016787 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|G3DSA:4.10.860.10|MF_00204|PF00271|PF02151|PF04851|PF12344|SM00487|SM00490|SSF46600|SSF52540|TIGR00631 ALFP_RS07430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017867|IPR023485 Phosphotyrosine protein phosphatase I superfamily|Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 G3DSA:3.40.50.270|PF01451|PR00719|SM00226|SSF52788 ALFP_RS07435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000944|IPR010242|IPR011991 Transcription factor HTH, IscR|Transcription regulator Rrf2-type|Winged helix-turn-helix DNA-binding domain GO:0003690|GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF02082|SSF46785|TIGR00738|TIGR02010 ALFP_RS07440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000192|IPR010240|IPR015421|IPR015422|IPR015424|IPR016454|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulfurase|Cysteine desulfurase IscS|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0030170|GO:0031071|GO:0044571 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00331|PF00266|PIRSF005572|PS00595|SSF53383 ALFP_RS07445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 G3DSA:3.90.1010.10|PF01592|SSF82649 ALFP_RS07450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000361|IPR016092|IPR017870 FeS cluster biogenesis|FeS cluster insertion protein|FeS cluster insertion, C-terminal, conserved site GO:0005198|GO:0016226|GO:0051536 G3DSA:2.60.300.12|PF01521|PS01152|SSF89360|TIGR00049 ALFP_RS07455 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011607|IPR018148 Methylglyoxal synthase, active site|Methylglyoxal synthase-like domain GO:0008929|GO:0019242 G3DSA:3.40.50.1380|PS01335|SSF52335 ALFP_RS07465 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS07470 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002313|IPR004364|IPR004365|IPR012340|IPR018149 Aminoacyl-tRNA synthetase, class II (D/K/N)|Lysine-tRNA ligase, class II|Lysyl-tRNA synthetase, class II, C-terminal|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00252|PF00152|PF01336|PR00982|SSF50249|SSF55681|TIGR00499 ALFP_RS07475 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|SSF51735 ALFP_RS07485 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003660|IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PR00260|SM00283|SM00304|SSF58104 ALFP_RS07490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004368|IPR006196|IPR012340 Nucleic acid-binding, OB-fold|RNA-binding domain, S1, IF1 type|Translation initiation factor IF-1 GO:0003723|GO:0003743|GO:0006413 G3DSA:2.40.50.140|MF_00075|PF01176|SSF50249|TIGR00008 ALFP_RS07495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS07500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PF01758 ALFP_RS07505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS07510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001667|IPR003156|IPR004610 Bacterial RecJ exonuclease|DDH domain|DHHA1 domain GO:0003676|GO:0006281|GO:0006310|GO:0008409 PF01368|PF02272|SSF64182|TIGR00644 ALFP_RS07520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003838|IPR011925|IPR025857 ABC transporter permease protein domain|Lipoprotein-releasing system transmembrane protein LolC/E|MacB-like periplasmic core domain GO:0016020|GO:0016021|GO:0042953|GO:0042954 PF02687|PF12704|TIGR02212 ALFP_RS07525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS07530 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001130|IPR018228|IPR032466 Deoxyribonuclease, TatD-related, conserved site|Metal-dependent hydrolase|TatD family GO:0016788|GO:0016888 G3DSA:3.20.20.140|PF01026|PIRSF005902|PS01137|SSF51556 ALFP_RS07535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001279|IPR004477|IPR004797|IPR025405 ComEC/Rec2-related protein|Competence protein ComEC/Rec2|Domain of unknown function DUF4131|Metallo-beta-lactamase GO:0016021|GO:0030420 G3DSA:3.60.15.10|PF00753|PF03772|PF13567|SM00849|SSF56281|TIGR00360|TIGR00361 ALFP_RS07540 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PR00111|SSF53474 ALFP_RS07545 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003141|IPR004013|IPR016195 PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003677|GO:0003824|GO:0003887|GO:0006260 G3DSA:3.20.20.140|PF02811|SM00481|SSF89550 ALFP_RS07550 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001437|IPR006358|IPR018151|IPR022691|IPR028624 Transcription elongation factor GreA/GreB|Transcription elongation factor GreB|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|MF_00930|PF01272|PF03449|PS00829|PS00830|SSF46557|SSF54534|TIGR01461 ALFP_RS07555 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010073|IPR010918|IPR016188|IPR029062 AIR synthase-related protein, C-terminal domain|Class I glutamine amidotransferase-like|Phosphoribosylformylglycinamidine synthase|PurM-like, N-terminal domain GO:0004642|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.40.50.880|G3DSA:3.90.650.10|MF_00419|PF02769|PF13507|SM01211|SSF109736|SSF52317|SSF55326|SSF56042|SSF82697|TIGR01735 ALFP_RS07560 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000644|IPR001093|IPR005990|IPR013785|IPR015875 Aldolase-type TIM barrel|CBS domain|IMP dehydrogenase / GMP reductase, conserved site|IMP dehydrogenase/GMP reductase|Inosine-5'-monophosphate dehydrogenase GO:0003824|GO:0003938|GO:0006164|GO:0016491|GO:0055114 G3DSA:3.20.20.70|MF_01964|PF00478|PF00571|PIRSF000130|PS00487|SM00116|SM01240|SSF51412|SSF54631|TIGR01302 ALFP_RS07565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS07570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR011051|IPR014710|IPR018060|IPR018062|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF02311|PF12833|PR00032|PS00041|SM00342|SSF46689|SSF51182 ALFP_RS07575 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 ALFP_RS07580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001674|IPR004739|IPR014729|IPR017926|IPR022310|IPR022955|IPR029062 Class I glutamine amidotransferase-like|GMP synthase|GMP synthase, C-terminal|GMP synthase, N-terminal|Glutamine amidotransferase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003922|GO:0005524|GO:0006164|GO:0006177 G3DSA:3.30.300.10|G3DSA:3.40.50.620|G3DSA:3.40.50.880|MF_00344|PF00117|PF00958|PF02540|SSF52317|SSF52402|SSF54810|TIGR00884|TIGR00888 ALFP_RS07615 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006664|IPR006665|IPR032608 OmpA-like domain|Outer membrane protein, bacterial|Protein of unknown function DUF4892 GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PF16234|PR01021|SSF103088 ALFP_RS07625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012337 Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|SSF53098 ALFP_RS07635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006328|IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Haloacid dehalogenase, type II GO:0008152|GO:0016787|GO:0019120 G3DSA:3.40.50.1000|PF13419|PR00413|SSF56784|TIGR01428|TIGR01493 ALFP_RS07640 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|SSF46689|SSF48498 ALFP_RS07645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000390 Small multidrug resistance protein family GO:0016021 PF00893|SSF103481 ALFP_RS07650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SSF51735 ALFP_RS07655 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS07660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002629|IPR006276|IPR013215 Cobalamin-independent methionine synthase|Cobalamin-independent methionine synthase MetE, C-terminal/archaeal|Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652|GO:0009086 G3DSA:3.20.20.210|MF_00172|PF01717|PF08267|PIRSF000382|SSF51726|TIGR01371 ALFP_RS07665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015004 Protein of unknown function DUF1852 PF08908|PIRSF034367 ALFP_RS07670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002629|IPR016456 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal|Predicted cobalamin-independent methionine synthase, catalytic subunit GO:0003871|GO:0008270|GO:0009086 G3DSA:3.20.20.210|PF01717|PIRSF005632|SSF51726 ALFP_RS07675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 ALFP_RS07680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006089|IPR006091|IPR009075|IPR009100 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0055114 G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PS00073|SSF47203|SSF56645 ALFP_RS07685 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004360|IPR026275|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/bleomycin resistance protein/dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PIRSF039020|SSF54593 ALFP_RS07690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011991|IPR013196|IPR026881 Helix-turn-helix, type 11|WYL domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF08279|PF13280|SSF46785 ALFP_RS07695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003495|IPR011629|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|SM00833|SSF52540 ALFP_RS07700 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003801|IPR022838 GTP cyclohydrolase FolE2|GTP cyclohydrolase FolE2/MptA GO:0003933|GO:0003934|GO:0035998 G3DSA:3.10.270.10|MF_01527_B|PF02649 ALFP_RS07705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002696 Putative membrane protein insertion efficiency factor MF_00386|PD004225|PF01809|SM01234|TIGR00278 ALFP_RS07710 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003808 Fe-S metabolism associated domain, SufE-like G3DSA:3.90.1010.10|PF02657|SSF82649 ALFP_RS07715 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002195|IPR004722|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Dihydroorotase|Dihydroorotase, conserved site|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0004151|GO:0006221|GO:0016787|GO:0016810|GO:0016812|GO:0046872 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PS00483|SSF51338|SSF51556|TIGR00857 ALFP_RS07720 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|SSF46785 ALFP_RS07725 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002496|IPR026660 Phosphoribosyl-AMP cyclohydrolase|Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 MF_01021|PD002610|PF01502|SSF141734 ALFP_RS07730 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002823 Protein of unknown function DUF112, transmembrane PF01970 ALFP_RS07735 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009936 Protein of unknown function DUF1468 PF07331 ALFP_RS07740 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00672|PF02518|PR00344|SM00304|SM00387|SM00388|SSF47384|SSF55874 ALFP_RS07745 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 ALFP_RS07750 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004399|IPR013749|IPR029056 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase|Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Ribokinase-like GO:0008972|GO:0009228 G3DSA:3.40.1190.20|PF08543|SSF53613|TIGR00097 ALFP_RS07755 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000086|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|SSF55811 ALFP_RS07760 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS07765 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PF04632 ALFP_RS07770 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012451 Protein of unknown function DUF1656 PF07869 ALFP_RS07775 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic G3DSA:2.40.50.100|PF13437|PF13533|SSF111369 ALFP_RS07780 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|PF02321|SSF56954|TIGR01845 ALFP_RS07785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004370|IPR014347 4-oxalocrotonate tautomerase|Tautomerase/MIF superfamily GO:0006725|GO:0016853 G3DSA:3.30.429.10|PF14552|SSF55331 ALFP_RS07790 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000971|IPR001221|IPR001433|IPR008333|IPR009050|IPR012292|IPR017938 Globin|Globin-like|Globin/Protoglobin|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0016491|GO:0019825|GO:0020037|GO:0055114 G3DSA:1.10.490.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00042|PF00175|PF00970|PR00410|SSF46458|SSF52343|SSF63380 ALFP_RS07795 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010061|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase|Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|SSF53720|TIGR01722 ALFP_RS07800 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007436 Protein of unknown function DUF485 PF04341 ALFP_RS07805 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001734|IPR018212 Sodium/solute symporter|Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474|PS00456|TIGR00813 ALFP_RS07810 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016021|GO:0022904 PF01292|SSF81342 ALFP_RS07815 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004136|IPR013785 Aldolase-type TIM barrel|Nitronate monooxygenase GO:0003824|GO:0018580|GO:0055114 G3DSA:3.20.20.70|PF03060|SSF51412 ALFP_RS07820 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS07825 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009057|IPR011051|IPR014710|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF12833|PR00032|PS00041|SM00342|SSF46689|SSF51182 ALFP_RS07840 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PS01081|SSF46689|SSF48498 ALFP_RS07845 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 G3DSA:3.40.50.2000|PF00201|SSF53756 ALFP_RS07850 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018146|IPR029068 Glyoxalase I, conserved site|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GO:0004462|GO:0046872 G3DSA:3.10.180.10|PF13669|PS00934|SSF54593 ALFP_RS07855 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF02798|PF13410|SSF47616|SSF52833 ALFP_RS07860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS07865 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007348|IPR008457|IPR014755|IPR014756 CopC domain|Copper resistance protein CopC/internalin, immunoglobulin-like|Copper resistance protein D|Immunoglobulin E-set GO:0005507|GO:0016021|GO:0042597|GO:0046688 G3DSA:2.60.40.1220|PF04234|PF05425|SSF81296 ALFP_RS07870 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012533 GLE1, N-terminal, bacteria PF07987 ALFP_RS07875 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021333 Protein of unknown function DUF2946 PF11162 ALFP_RS07880 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13410|PF13417|SSF47616|SSF52833 ALFP_RS07885 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001907|IPR023562|IPR029045|IPR033135 ATP-dependent Clp protease proteolytic subunit|Clp protease proteolytic subunit /Translocation-enhancing protein TepA|ClpP, histidine active site|ClpP/crotonase-like domain GO:0004252|GO:0006508 G3DSA:3.90.226.10|MF_00444|PF00574|PR00127|PS00382|SSF52096 ALFP_RS07895 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007655|IPR011990 Protein of unknown function DUF560|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF04575|SSF48452|SSF56935 ALFP_RS07900 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SSF56925 ALFP_RS07905 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010917|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|SSF56935 ALFP_RS07910 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|SM00342|SSF46689 ALFP_RS07915 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011991|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.40.50.150|PF13489|SSF53335 ALFP_RS07920 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS07925 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000594|IPR001763|IPR016040 NAD(P)-binding domain|Rhodanese-like domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.250.10|G3DSA:3.40.50.720|PF00581|PF00899|SM00450|SSF52821|SSF69572 ALFP_RS07930 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000555|IPR028090 JAB domain, prokaryotic|JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 G3DSA:3.40.140.10|PF14464|SM00232|SSF102712 ALFP_RS07935 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003749|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiamineS/Molybdopterin converting factor subunit 1 G3DSA:3.10.20.30|PF02597|SSF54285 ALFP_RS07940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.40.50.10540|PF02515|SSF89796 ALFP_RS07945 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000873|IPR025110 AMP-binding enzyme C-terminal domain|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|SSF56801 ALFP_RS07950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|SSF47203|SSF56645 ALFP_RS07955 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS07960 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008928|IPR012341 Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824 G3DSA:1.50.10.10|SSF48208 ALFP_RS07965 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003787|IPR027396 DsrEFH-like|Sulphur relay, DsrE/F-like protein G3DSA:3.40.1260.10|PF02635|SSF75169 ALFP_RS07970 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118|TIGR00778 ALFP_RS07975 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01022|PR00778|SM00418|SSF46785 ALFP_RS07980 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021309 Protein of unknown function DUF2892 PF11127 ALFP_RS07985 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010488|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Zeta toxin domain GO:0005524|GO:0016301 G3DSA:3.40.50.300|PF06414|SSF52540 ALFP_RS07995 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR011051|IPR014710|IPR018060|IPR018062 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF02311|PF12833|PS00041|SM00342|SSF46689|SSF51182 ALFP_RS08000 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000891|IPR002034|IPR005668|IPR013709|IPR013785 2-isopropylmalate synthase|2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain|Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Pyruvate carboxyltransferase GO:0003824|GO:0003852|GO:0009098|GO:0019752|GO:0046912 G3DSA:3.20.20.70|MF_00572|PF00682|PF08502|PS00815|PS00816|SM00917|SSF110921|SSF51569|SSF89000 ALFP_RS08005 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|SM00347|SSF46785 ALFP_RS08010 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017208|IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33|Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 G3DSA:3.40.50.1820|PF12146|PIRSF037442|SSF53474 ALFP_RS08015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS08020 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013341|IPR013342|IPR013370|IPR018110|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal domain|Mandelate racemase/muconate lactonizing enzyme, conserved site|Muconate/chloromuconate cycloisomerase GO:0009063|GO:0018849|GO:0018850|GO:0030145 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF02746|PF13378|PS00908|PS00909|SM00922|SSF51604|SSF54826|TIGR02534 ALFP_RS08025 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000627|IPR007535|IPR012801|IPR015889 Catechol 1,2-dioxygenase, proteobacteria|Catechol dioxygenase, N-terminal|Intradiol ring-cleavage dioxygenase, C-terminal|Intradiol ring-cleavage dioxygenase, core GO:0003824|GO:0005506|GO:0006725|GO:0008199|GO:0009712|GO:0016702|GO:0018576|GO:0019614|GO:0055114 G3DSA:2.60.130.10|PF00775|PF04444|PS00083|SSF49482|TIGR02439 ALFP_RS08030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004163|IPR004165|IPR012792 3-oxoacid CoA-transferase, subunit A|Coenzyme A transferase binding site|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.1080.10|PF01144|PS01273|SM00882|SSF100950|TIGR02429 ALFP_RS08035 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004164|IPR004165|IPR012791 3-oxoacid CoA-transferase, subunit B|Coenzyme A transferase active site|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.810.20|PF01144|PS01274|SM00882|SSF100950|TIGR02428 ALFP_RS08040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000073|IPR000639|IPR026968|IPR029058 3-oxoadipate enol-lactonase 1/2|Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824|GO:0042952|GO:0047570 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|SSF53474|TIGR02427 ALFP_RS08045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003464|IPR011008|IPR026029 Dimeric alpha-beta barrel|Muconolactone delta-isomerase|Muconolactone isomerase domain GO:0006725 PD006619|PF02426|PIRSF001486|SSF54909|TIGR03221 ALFP_RS08050 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 PF03594|TIGR00843 ALFP_RS08055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006073|IPR027417 GTP binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|PF01926|SSF52540 ALFP_RS08060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006073|IPR027417 GTP binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|PF01926|SSF52540 ALFP_RS08065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 PF02535 ALFP_RS08070 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR027417 ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SSF52540 ALFP_RS08075 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000286|IPR023801 Histone deacetylase domain|Histone deacetylase superfamily G3DSA:3.40.800.20|PF00850|PR01270|SSF52768 ALFP_RS08080 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|SM00421|SSF46894 ALFP_RS08085 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001189|IPR019831|IPR019832|IPR019833 Manganese/iron superoxide dismutase|Manganese/iron superoxide dismutase, C-terminal|Manganese/iron superoxide dismutase, N-terminal|Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 G3DSA:1.10.287.990|PF00081|PF02777|PIRSF000349|PR01703|PS00088|SSF46609|SSF54719 ALFP_RS08090 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 ALFP_RS08095 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic G3DSA:2.60.120.380 ALFP_RS08100 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003737|IPR024078 N-acetylglucosaminyl phosphatidylinositol deacetylase-related|Putative deacetylase LmbE-like domain G3DSA:2.120.10.70|G3DSA:3.40.50.10320|PF02585|SSF102588|SSF89372 ALFP_RS08105 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010266 NnrS PF05940 ALFP_RS08110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|SM00347|SSF46785 ALFP_RS08115 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905|SSF54373 ALFP_RS08120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS08130 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001608|IPR011078|IPR029066 Alanine racemase, N-terminal|PLP-binding barrel|Uncharacterised protein family UPF0001 G3DSA:3.20.20.10|PF01168|PIRSF004848|SSF51419|TIGR00044 ALFP_RS08135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|SM00345|SSF46785|SSF53383 ALFP_RS08140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS08145 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|SM00347|SSF46785 ALFP_RS08150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR014883 VRR-NUC domain GO:0016788 PF08774|SM00990 ALFP_RS08155 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006554|IPR006555|IPR010614|IPR027417 ATP-dependent helicase, C-terminal|DEAD2|Helicase-like, DEXD box c2 type|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0003677|GO:0004003|GO:0005524|GO:0006139|GO:0008026|GO:0016818 G3DSA:3.40.50.300|PF06733|PF13307|SM00488|SM00491|SSF52540 ALFP_RS08160 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006076|IPR016040|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain|NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.40.50.720|PF01266|SSF51905|SSF54373 ALFP_RS08165 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003953|IPR005288|IPR015939|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|L-aspartate oxidase|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0005737|GO:0008734|GO:0009435|GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PR00368|SSF46977|SSF51905|SSF56425|TIGR00551 ALFP_RS08170 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 PF02445|SSF142754|TIGR00550 ALFP_RS08175 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023210 NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|SSF51430 ALFP_RS08180 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005358 Putative zinc- or iron-chelating domain containing protein PF03692 ALFP_RS08190 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002196|IPR023346|IPR023347 Glycoside hydrolase, family 24|Lysozyme domain|Lysozyme-like domain GO:0003796|GO:0009253|GO:0016998 G3DSA:1.10.530.40|PF00959|SSF53955 ALFP_RS08195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002818|IPR009057|IPR018060|IPR018062|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.880|PF01965|PF12833|PS00041|SM00342|SSF46689|SSF52317 ALFP_RS08200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|SSF56281 ALFP_RS08205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 ALFP_RS08210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|SM00749 ALFP_RS08215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003738 SOS response associated peptidase (SRAP) G3DSA:3.90.1680.10|PF02586|SSF143081 ALFP_RS08220 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|SSF54593 ALFP_RS08230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004254|IPR005744 AdipoR/Haemolysin-III-related|Hly-III GO:0016021|GO:0019835 PF03006|TIGR01065 ALFP_RS08235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010879 Domain of unknown function DUF1508 G3DSA:3.30.160.160|PF07411|SSF160113 ALFP_RS08240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 ALFP_RS08245 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|SSF51316 ALFP_RS08250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000566|IPR011038|IPR012674|IPR022271 Calycin|Calycin-like|Lipocalin, ApoD type|Lipocalin/cytosolic fatty-acid binding domain G3DSA:2.40.128.20|PF08212|PIRSF036893|SSF50814 ALFP_RS08255 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001638|IPR018313 Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF00497|PS01039|SM00062|SSF53850 ALFP_RS08260 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 ALFP_RS08265 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 ALFP_RS08270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 ALFP_RS08285 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic G3DSA:2.60.450.10 ALFP_RS08295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002078|IPR002197|IPR003593|IPR004096|IPR009057|IPR010523|IPR024096|IPR025662|IPR027417 4-vinyl reductase, 4VR|AAA+ ATPase domain|Activator of aromatic catabolism|DNA binding HTH domain, Fis-type|Homeodomain-like|NO signalling/Golgi transport ligand-binding domain|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1 GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.1380.20|G3DSA:3.40.50.300|PD485437|PF00158|PF02830|PF02954|PF06505|PR01590|PS00675|SM00382|SM00989|SSF111126|SSF46689|SSF52540 ALFP_RS08300 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010353 Phenol hydroxylase subunit PD468738|PF06099|PIRSF000039 ALFP_RS08305 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003430|IPR009078|IPR012078|IPR012348 Ferritin-like superfamily|Methane/phenol monooxygenase, hydroxylase component|Methane/phenol/toluene hydroxylase|Ribonucleotide reductase-related GO:0006725|GO:0016491|GO:0016709|GO:0055114 G3DSA:1.10.620.20|PF02332|PIRSF000040|SSF47240 ALFP_RS08310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 G3DSA:3.90.56.10|PD004249|PF02406|SSF56029 ALFP_RS08315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003430|IPR007029|IPR009078|IPR012348 Ferritin-like superfamily|Methane/phenol/toluene hydroxylase|Ribonucleotide reductase-related|YHS domain GO:0006725|GO:0016491|GO:0055114 G3DSA:1.10.620.20|PF02332|PF04945|SSF47240 ALFP_RS08320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006756 Phenol hydroxylase PF04663 ALFP_RS08325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR001221|IPR001433|IPR006058|IPR008333|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00410|PS00197|SSF52343|SSF54292|SSF63380 ALFP_RS08330 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS08335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001663|IPR015879|IPR015881|IPR017941 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site|Aromatic-ring-hydroxylating dioxygenase, alpha subunit|Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0006725|GO:0016491|GO:0016705|GO:0016708|GO:0019439|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|PR00090|PS00570|SSF50022|SSF55961 ALFP_RS08340 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000391|IPR017641|IPR032710 Benzoate 1,2-dioxygenase, small subunit|NTF2-like domain|Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0016708|GO:0055114 G3DSA:3.10.450.50|PF00866|SSF54427|TIGR03232 ALFP_RS08345 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR001221|IPR001433|IPR001709|IPR006058|IPR008333|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00371|PR00410|PS00197|SSF52343|SSF54292|SSF63380 ALFP_RS08350 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SSF51735 ALFP_RS08355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00217|SSF103473 ALFP_RS08360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PIRSF006324 ALFP_RS08370 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000843|IPR010982|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PR00036|PS00356|SM00354|SSF47413|SSF53822 ALFP_RS08375 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 ALFP_RS08380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 ALFP_RS08385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006042|IPR006043 Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00860|PS01116 ALFP_RS08390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|SSF51182 ALFP_RS08405 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001107|IPR001972|IPR018080 Band 7 domain|Band 7/stomatin-like, conserved site|Stomatin family GO:0016020 PF01145|PR00721|PS01270|SM00244|SSF117892 ALFP_RS08410 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002810|IPR012340 NfeD-like, C-terminal domain|Nucleic acid-binding, OB-fold G3DSA:2.40.50.140|PF01957|SSF141322 ALFP_RS08415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|SSF53335 ALFP_RS08420 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR032774 WG containing repeat PF14903 ALFP_RS08425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005590 Protein of unknown function DUF333 PF03891 ALFP_RS08435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002139|IPR011611|IPR029056 Carbohydrate kinase PfkB|Ribokinase-like|Ribokinase/fructokinase GO:0004747|GO:0006014 G3DSA:3.40.1190.20|PF00294|PR00990|SSF53613 ALFP_RS08445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005590 Protein of unknown function DUF333 PF03891 ALFP_RS08450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002314|IPR002320|IPR004095|IPR004154|IPR012675|IPR012676|IPR012947|IPR018163 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Beta-grasp domain|TGS|TGS-like|Threonine-tRNA ligase, class IIa|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166|GO:0004812|GO:0004829|GO:0005524|GO:0005737|GO:0006418|GO:0006435|GO:0016876|GO:0043039 G3DSA:3.10.20.30|G3DSA:3.30.54.20|G3DSA:3.30.930.10|G3DSA:3.30.980.10|G3DSA:3.40.50.800|MF_00184|PF00587|PF02824|PF03129|PF07973|PR01047|SM00863|SSF52954|SSF55186|SSF55681|SSF81271|TIGR00418 ALFP_RS08455 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001288|IPR019813|IPR019814|IPR019815 Translation initiation factor 3|Translation initiation factor 3, C-terminal|Translation initiation factor 3, N-terminal|Translation initiation factor 3, conserved site GO:0003743|GO:0006413 G3DSA:3.10.20.80|G3DSA:3.30.110.10|MF_00080|PF00707|PF05198|PS00938|SSF54364|SSF55200|TIGR00168 ALFP_RS08460 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004215|IPR004218|IPR006284|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Glutathione synthetase, prokaryotic|Pre-ATP-grasp domain|Prokaryotic glutathione synthetase, ATP-binding|Prokaryotic glutathione synthetase, N-terminal GO:0003824|GO:0004363|GO:0005524|GO:0005829|GO:0006750 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00162|PF02951|PF02955|SSF52440|SSF56059|TIGR01380 ALFP_RS08465 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 G3DSA:3.40.50.510|PF03610|SSF53062 ALFP_RS08470 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000032|IPR001020|IPR002114 Phosphocarrier protein HPr-like|Phosphotransferase system, HPr histidine phosphorylation site|Phosphotransferase system, HPr serine phosphorylation site G3DSA:3.30.1340.10|PF00381|PR00107|PS00369|PS00589|SSF55594|TIGR01003 ALFP_RS08475 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000121|IPR006318|IPR008279|IPR008731|IPR015813|IPR018274|IPR023151|IPR024692 PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphotransferase system, enzyme I|Phosphotransferase system, enzyme I N-terminal|Phosphotransferase system, enzyme I-like|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0008965|GO:0009401|GO:0016310|GO:0016772 G3DSA:1.10.274.10|G3DSA:3.20.20.60|G3DSA:3.50.30.10|PF00391|PF02896|PF05524|PIRSF000732|PR01736|PS00370|PS00742|SSF47831|SSF51621|SSF52009|TIGR01417 ALFP_RS08480 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic SSF58113 ALFP_RS08485 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007475 Membrane fusogenic activity PF04380 ALFP_RS08490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS08495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001646|IPR032675 Leucine-rich repeat domain, L domain-like|Pentapeptide repeat G3DSA:3.80.10.10|PF13599|SSF141571 ALFP_RS08500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000523|IPR003593|IPR004482|IPR014721|IPR020568|IPR025158|IPR027417 AAA+ ATPase domain|Magnesium chelatase ChlI domain|Mg chelatase-related protein|Mg chelatase-related protein, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF01078|PF13335|PF13541|SM00382|SSF52540|SSF54211|TIGR00368 ALFP_RS08505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001706|IPR018265|IPR021137 Ribosomal protein L35|Ribosomal protein L35, conserved site|Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00514|PF01632|PR00064|PS00936|SSF143034|TIGR00001 ALFP_RS08510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:1.10.1900.20|MF_00382|PD002389|PF00453|PR00062|PS00937|SSF74731|TIGR01032 ALFP_RS08515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002319|IPR004188|IPR004529|IPR010978|IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial|Phenylalanine-tRNA ligase, class II, N-terminal|Phenylalanyl-tRNA synthetase|Phenylalanyl-tRNA synthetase, class IIc, alpha subunit|tRNA-binding arm GO:0000049|GO:0000166|GO:0004812|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0043039 G3DSA:3.30.930.10|MF_00281|PF01409|PF02912|SSF46589|SSF55681|TIGR00468 ALFP_RS08520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002547|IPR004532|IPR005121|IPR005146|IPR005147|IPR009061|IPR012340|IPR020825 B3/B4 tRNA-binding domain|Nucleic acid-binding, OB-fold|Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding|Phenylalanine-tRNA ligase, class IIc, beta subunit|Phenylalanyl-tRNA synthetase, B3/B4|Putative DNA-binding domain|tRNA synthetase, B5-domain|tRNA-binding domain GO:0000049|GO:0000287|GO:0003723|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0008033 G3DSA:2.40.50.140|G3DSA:3.30.56.10|G3DSA:3.30.56.20|G3DSA:3.30.70.380|G3DSA:3.30.930.10|G3DSA:3.50.40.10|MF_00283|PF01588|PF03147|PF03483|PF03484|SM00873|SM00874|SM00896|SSF46955|SSF50249|SSF54991|SSF55681|SSF56037|TIGR00472 ALFP_RS08525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000119|IPR005684|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain|Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 G3DSA:4.10.520.10|MF_00380|PF00216|PR01727|PS00045|SM00411|SSF47729|TIGR00987 ALFP_RS08530 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|SM00422|SSF46955 ALFP_RS08535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007402|IPR009078|IPR011197 Ferritin-like superfamily|Protein of unknown function DUF455|Uncharacterised conserved protein UCP012318 PF04305|PIRSF012318|SSF47240 ALFP_RS08540 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007627|IPR013325|IPR018764 Anti-sigma K factor RskA|RNA polymerase sigma factor, region 2|RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0005886|GO:0006352|GO:0006355|GO:0016021|GO:0016987 G3DSA:1.10.1740.10|PF04542|PF10099|SSF88946 ALFP_RS08545 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 ALFP_RS08550 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000944|IPR011991|IPR014290 SUF system FeS cluster assembly regulator|Transcription regulator Rrf2-type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|SSF46785|TIGR00738|TIGR02944 ALFP_RS08555 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000825|IPR010231 SUF system FeS cluster assembly, SufB|SUF system FeS cluster assembly, SufBD GO:0016226 PF01458|SSF101960|TIGR01980 ALFP_RS08560 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR010230|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|FeS cluster assembly SUF system, ATPase SufC|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR01978 ALFP_RS08565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000825|IPR011542 SUF system FeS cluster assembly, SufBD|SUF system FeS cluster assembly, SufD GO:0016226 PF01458|SSF101960|TIGR01981 ALFP_RS08570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000192|IPR010970|IPR015421|IPR015422|IPR015424 Aminotransferase class V domain|Cysteine desulfurase, SufS|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006534|GO:0030170|GO:0031071 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|SSF53383|TIGR01979 ALFP_RS08575 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 G3DSA:3.90.1010.10|PF01592|SSF82649|TIGR01994 ALFP_RS08580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002744|IPR017776 Domain of unknown function DUF59|FeS assembly SUF system protein SufT, putative PF01883|SSF117916|TIGR03406 ALFP_RS08585 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40|SSF47413 ALFP_RS08590 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001867|IPR011991|IPR016032 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00486|SM00862|SSF46894 ALFP_RS08600 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|SSF56954 ALFP_RS08610 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR011527|IPR017750|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|ATPase, type I secretion system|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|G3DSA:3.90.70.10|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123|TIGR03375 ALFP_RS08615 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003997|IPR006144|IPR010129 RTX secretion protein D, Gram-negative bacteria|Secretion protein HlyD, conserved site|Type I secretion membrane fusion protein, HlyD family GO:0008565|GO:0009306|GO:0015031|GO:0016020|GO:0016021 G3DSA:2.40.50.100|PF13437|PR01490|PS00543|TIGR01843 ALFP_RS08620 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008928|IPR012341 Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824 G3DSA:1.50.10.10|SSF48208 ALFP_RS08625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 ALFP_RS08635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004101|IPR013221|IPR019079|IPR029052 Capsule synthesis protein, CapA|Metallo-dependent phosphatase-like|Mur ligase, C-terminal|Mur ligase, central GO:0005524|GO:0009058|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.60.21.30|G3DSA:3.90.190.20|PF02875|PF08245|PF09587|SM00854|SSF53244|SSF53623|SSF56300 ALFP_RS08640 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001967|IPR004101|IPR012338|IPR013221 Beta-lactamase/transpeptidase-like|Mur ligase, C-terminal|Mur ligase, central|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0005524|GO:0006508|GO:0009002|GO:0009058|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.40.710.10|G3DSA:3.90.190.20|PF00768|PF02875|PF08245|SSF53244|SSF53623|SSF56601 ALFP_RS08645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000291|IPR005905|IPR011095|IPR011127|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|D-alanine--D-alanine ligase|D-alanine--D-alanine ligase, C-terminal|D-alanine--D-alanine ligase, N-terminal domain|D-alanine--D-alanine ligase/VANA/B/C, conserved site|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0005737|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00047|PF01820|PF07478|PS00843|PS00844|SSF52440|SSF56059|TIGR01205 ALFP_RS08650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000281|IPR001347|IPR009057|IPR011991 Helix-turn-helix protein RpiR|Homeodomain-like|Sugar isomerase (SIS)|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005975|GO:0006355|GO:0030246 G3DSA:1.10.10.10|G3DSA:3.40.50.10490|PF01380|PF01418|SSF46689|SSF53697 ALFP_RS08655 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001926|IPR010081 Diaminopropionate ammonia-lyase|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0008838|GO:0030170 G3DSA:3.40.50.1100|PF00291|SSF53686|TIGR01747 ALFP_RS08660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002933|IPR010158|IPR011650 Amidase, carbamoylase-type|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787|GO:0016813 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF001235|SSF53187|SSF55031|TIGR01879 ALFP_RS08665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 ALFP_RS08670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS08675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 ALFP_RS08680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540 ALFP_RS08685 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|SSF56317 ALFP_RS08690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001261|IPR002933|IPR011650 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain GO:0006508|GO:0008152|GO:0008237|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PS00758|SSF53187|SSF55031 ALFP_RS08695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009197|IPR010799|IPR015995 Microcystin LR degradation protein MlrC|Microcystin LR degradation protein MlrC, C-terminal|Microcystin LR degradation protein MlrC, N-terminal PF07171|PF07364|PIRSF012702 ALFP_RS08705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|SSF56349 ALFP_RS08710 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR019701 Bacteriophage P22, NinX PF10765 ALFP_RS08715 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007539 Domain of unknown function DUF551 PF04448 ALFP_RS08730 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000971|IPR001433|IPR001834|IPR008333|IPR009050|IPR012292|IPR017938|IPR023950 Flavohemoprotein|Globin|Globin-like|Globin/Protoglobin|NADH:cytochrome b5 reductase (CBR)|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Riboflavin synthase-like beta-barrel GO:0008941|GO:0016491|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 G3DSA:1.10.490.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|MF_01252|PF00042|PF00175|PF00970|PR00406|SSF46458|SSF52343|SSF63380 ALFP_RS08735 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000944|IPR011991 Transcription regulator Rrf2-type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|SSF46785|TIGR00738 ALFP_RS08740 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007476 Putative exonuclease, RdgC GO:0006310 MF_00194|PF04381 ALFP_RS08750 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|MF_00984|PF00436|PIRSF002070|SSF50249|TIGR00621 ALFP_RS08755 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011335|IPR011604 Exonuclease, phage-type/RecB, C-terminal|Restriction endonuclease type II-like GO:0003677|GO:0004518 G3DSA:3.90.320.10|SSF52980 ALFP_RS08775 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025272 Domain of unknown function DUF4065 PF13274 ALFP_RS08785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015927|IPR019759|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C G3DSA:2.10.109.10|PF00717|SSF51306 ALFP_RS08790 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40 ALFP_RS08810 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008711 Recombinase NinB G3DSA:1.10.3790.10|PF05772|SSF103370 ALFP_RS08815 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010774 Protein of unknown function DUF1364 G3DSA:3.30.50.20|PF07102 ALFP_RS08820 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF13730|SSF46785 ALFP_RS08835 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009414 Protein of unknown function DUF1064 PF06356 ALFP_RS08840 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003607|IPR006674 HD domain|HD/PDEase domain G3DSA:1.10.3210.10|PF13328|SSF109604 ALFP_RS08855 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011646|IPR027417 KAP family P-loop domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF07693|SSF52540 ALFP_RS08860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005335 Terminase small subunit GO:0006323 PF03592 ALFP_RS08865 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006437 Bacteriophage terminase, large subunit GO:0006323 PF04466 ALFP_RS08870 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006445|IPR024459 Phage-associated protein HI1409|Protein of unknown function DUF1073 PF06381|TIGR01555 ALFP_RS08875 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016913 Uncharacterised conserved protein UCP029215 PF09979|PIRSF029215 ALFP_RS08885 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR020049 Protein of unknown function DUF2184 PF09950|PIRSF029202 ALFP_RS08915 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025395 Protein of unknown function DUF4128 PF13554 ALFP_RS08925 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding PF04383|SM01252 ALFP_RS08940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 G3DSA:1.10.150.20|PF14520|SSF47794 ALFP_RS08950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006431|IPR013491 Bacteriophage lambda, GpH, tail tape measure, C-terminal|Caudovirus, tape measure, N-terminal PF09718|TIGR02675 ALFP_RS08975 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 G3DSA:3.40.630.10|PF00246|SM00631|SSF53187 ALFP_RS08980 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013320 Concanavalin A-like lectin/glucanase domain G3DSA:2.60.120.200|SSF49899 ALFP_RS08985 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011990|IPR029058 Alpha/Beta hydrolase fold|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.50.1820|SSF48452|SSF53474 ALFP_RS09000 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002196|IPR023346|IPR023347 Glycoside hydrolase, family 24|Lysozyme domain|Lysozyme-like domain GO:0003796|GO:0009253|GO:0016998 G3DSA:1.10.530.40|PF00959|SSF53955 ALFP_RS09015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003738 SOS response associated peptidase (SRAP) G3DSA:3.90.1680.10|PF02586|SSF143081 ALFP_RS09030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003115|IPR014956 ParB/Sulfiredoxin|Putative ParB-like nuclease G3DSA:3.90.1530.10|PF08857|SSF110849 ALFP_RS09045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 ALFP_RS09055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000634|IPR001926|IPR011780 D-serine ammonia-lyase|Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0006520|GO:0008721|GO:0030170|GO:0046416 G3DSA:3.40.50.1100|MF_01030|PF00291|PS00165|SSF53686|TIGR02035 ALFP_RS09060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 ALFP_RS09065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009056|IPR014353 Cytochrome c-like domain|Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0009055|GO:0016020|GO:0016614|GO:0020037 G3DSA:1.10.760.10|PF00034|PIRSF000018|SSF46626 ALFP_RS09070 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|SSF51905 ALFP_RS09080 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001387|IPR010982|IPR011051|IPR013096|IPR014710 Cro/C1-type helix-turn-helix domain|Cupin 2, conserved barrel|Lambda repressor-like, DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF07883|PF12844|SM00530|SSF47413|SSF51182 ALFP_RS09085 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|SSF56436 ALFP_RS09100 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 PF02386 ALFP_RS09105 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003148|IPR006037|IPR016040 NAD(P)-binding domain|Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, N-terminal GO:0006813|GO:0008324 G3DSA:3.30.70.1450|G3DSA:3.40.50.720|PF02080|PF02254|SSF116726|SSF51735 ALFP_RS09110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001155|IPR013785 Aldolase-type TIM barrel|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00724|SSF51395 ALFP_RS09115 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369 ALFP_RS09120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003789|IPR019004|IPR023168 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal|Uncharacterised domain YOR215C, mitochondrial GO:0016884 G3DSA:1.10.10.410|G3DSA:1.10.1510.10|PF09424|SSF89095 ALFP_RS09125 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003141|IPR004013|IPR004805|IPR011708|IPR016195|IPR023073|IPR029460 Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|DNA polymerase, error-prone|DNA polymerase, helix-hairpin-helix motif|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003677|GO:0003824|GO:0003887|GO:0006260|GO:0008408 G3DSA:3.20.20.140|MF_01902|PF02811|PF07733|PF14579|SM00481|SSF89550|TIGR00594 ALFP_RS09130 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic SSF56672 ALFP_RS09135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017166|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Uncharacterised conserved protein UCP037290 G3DSA:3.40.50.300|PIRSF037290|SSF52540 ALFP_RS09140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005636 DTW PF03942|SM01144 ALFP_RS09145 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR014766 Carboxypeptidase, regulatory domain G3DSA:2.60.40.1120 ALFP_RS09150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008551 Transport and Golgi organisation protein 2 PF05742 ALFP_RS09155 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 G3DSA:3.40.630.10|PF04952|SSF53187 ALFP_RS09160 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS09165 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS09170 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001967|IPR012338|IPR018044 Beta-lactamase/transpeptidase-like|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 G3DSA:3.40.710.10|PF00768|PR00725|SSF56601 ALFP_RS09175 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009420 Flagellar protein FlhE PF06366 ALFP_RS09180 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000540|IPR002898 Flagellar motor protein MotA, conserved site|MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PS01307 ALFP_RS09185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006665|IPR025713 Motility protein B, N-terminal domain|OmpA-like domain G3DSA:3.30.1330.60|PF00691|PF13677|SSF103088 ALFP_RS09190 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474 ALFP_RS09195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|SSF51735 ALFP_RS09200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011251|IPR016215 Luciferase-like domain|Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497|GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PIRSF000337|SSF51679|TIGR03860 ALFP_RS09205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SSF51735 ALFP_RS09210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001783|IPR017938|IPR023366|IPR026017 ATP synthase subunit alpha-like domain|Lumazine-binding domain|Lumazine-binding protein|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.20|PF00677|PIRSF000498|SSF63380|TIGR00187 ALFP_RS09215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13521|SSF52540 ALFP_RS09225 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006656|IPR006657|IPR006963|IPR009010 Aspartate decarboxylase-like domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0030151|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|SM00926|SSF50692|SSF53706 ALFP_RS09230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005614 NrfD family PF03916 ALFP_RS09235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF13247|PS00198|SSF54862 ALFP_RS09240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935|TIGR01783 ALFP_RS09245 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain PF09723|SM00834|TIGR02605 ALFP_RS09250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004304 Acetamidase/Formamidase GO:0016811 G3DSA:2.60.120.580|G3DSA:3.10.28.20|PF03069|SSF141130 ALFP_RS09255 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 ALFP_RS09260 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006042|IPR006043|IPR017588 Uric acid permease UacT-like|Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0055085 PF00860|PS01116|TIGR00801|TIGR03173 ALFP_RS09265 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 ALFP_RS09270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|SSF53187|SSF55031|TIGR01891 ALFP_RS09275 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR011051|IPR014710|IPR018060|IPR018062 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF02311|PF12833|PS00041|SM00342|SSF46689|SSF51182 ALFP_RS09280 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS09285 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS09290 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|SSF53474 ALFP_RS09295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 ALFP_RS09300 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905 ALFP_RS09305 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|SM00347|SSF46785 ALFP_RS09310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000086|IPR015376|IPR015797|IPR020084 NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 G3DSA:3.90.79.10|PF00293|PF09297|PS00893|SSF55811 ALFP_RS09315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005229|IPR013527|IPR013551 Conserved hypothetical protein CHP00255|Domain of unknown function DUF1732|YicC-like, N-terminal PF03755|PF08340|TIGR00255 ALFP_RS09320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004843|IPR014577|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like|Uncharacterised conserved protein UCP033093, metallophosphoesterase-type GO:0016787 G3DSA:3.60.21.10|PF00149|PIRSF033093|SSF56300 ALFP_RS09325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13476|SSF52540|SSF57997 ALFP_RS09330 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001247|IPR002381|IPR015847|IPR018336|IPR020568|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|PNPase/RNase PH domain|Ribonuclease PH, conserved site|Ribonuclease phosphorolytic, bacterial-type|Ribosomal protein S5 domain 2-type fold GO:0000049|GO:0004549|GO:0008033 G3DSA:3.30.230.70|MF_00564|PF01138|PF03725|PS01277|SSF54211|SSF55666|TIGR01966 ALFP_RS09335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002637|IPR020922|IPR029001 Ham1-like protein|Inosine triphosphate pyrophosphatase-like|Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0016787|GO:0017111 G3DSA:3.90.950.10|MF_01405|PF01725|SSF52972|TIGR00042 ALFP_RS09340 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004559|IPR006638|IPR007197|IPR010723|IPR023404 Coproporphyrinogen III oxidase, oxygen-independent related|Elongator protein 3/MiaB/NifB|HemN, C-terminal|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114 G3DSA:3.80.30.20|PF04055|PF06969|SM00729|SSF102114|TIGR00539 ALFP_RS09345 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001637|IPR004809|IPR008146|IPR008147|IPR014746|IPR027302|IPR027303 Glutamine synthetase class-I, adenylation site|Glutamine synthetase type I|Glutamine synthetase, N-terminal conserved site|Glutamine synthetase, beta-Grasp domain|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0005737|GO:0006542|GO:0006807|GO:0009399 G3DSA:3.10.20.70|G3DSA:3.30.590.10|PF00120|PF03951|PS00180|PS00181|PS00182|SM01230|SSF54368|SSF55931|TIGR00653 ALFP_RS09350 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|SSF55729 ALFP_RS09355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS09360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS09365 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002109|IPR009908|IPR012336 Glutaredoxin|Methylamine utilisation protein, MauE|Thioredoxin-like fold GO:0009055|GO:0015035|GO:0016021|GO:0030416|GO:0045454 G3DSA:3.40.30.10|PF00462|PF07291|SSF52833 ALFP_RS09370 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS09375 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS09380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR026045 Ferric binding protein G3DSA:3.40.190.10|PF13343|PIRSF002825|SSF53850 ALFP_RS09385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001221|IPR001433|IPR001709|IPR008333|IPR017938 Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF00970|PR00371|PR00410|SSF52343|SSF63380 ALFP_RS09390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006056|IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|RidA family|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298|TIGR00004 ALFP_RS09395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001650|IPR004609|IPR011545|IPR012340|IPR014001|IPR027417|IPR033454 ATP-dependent DNA helicase RecG|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|RecG, wedge domain GO:0003676|GO:0004003|GO:0005524|GO:0006281|GO:0006310 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00270|PF00271|PF17191|SM00487|SM00490|SSF50249|SSF52540|TIGR00643 ALFP_RS09400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS09410 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002177|IPR008331|IPR009078|IPR012347|IPR023188 DNA-binding protein Dps|DNA-binding protein Dps, conserved site|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006879|GO:0006950|GO:0008199|GO:0016722|GO:0055114 G3DSA:1.20.1260.10|PF00210|PIRSF005900|PR01346|PS00819|SSF47240 ALFP_RS09415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 ALFP_RS09420 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.100|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 ALFP_RS09425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS09430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS09435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF13416|PS01037|SSF53850 ALFP_RS09440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000304|IPR008927|IPR016040|IPR028939|IPR029036 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Pyrroline-5-carboxylate reductase|Pyrroline-5-carboxylate reductase, catalytic, N-terminal|Pyrroline-5-carboxylate reductase, dimerisation domain GO:0004735|GO:0006561|GO:0055114 G3DSA:1.10.3730.10|G3DSA:3.40.50.720|MF_01925|PF03807|PF14748|PIRSF000193|PS00521|SSF48179|SSF51735|TIGR00112 ALFP_RS09445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 ALFP_RS09450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS09455 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851|IPR021807 ABC transporter, permease|High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal GO:0005215|GO:0006810|GO:0016020 PF02653|PF11862 ALFP_RS09460 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 ALFP_RS09465 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030660 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|High-affinity branched-chain amino acid transport ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015658|GO:0015803|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039137|PS00211|SM00382|SSF52540 ALFP_RS09470 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF02798|PF14497|SSF47616|SSF52833 ALFP_RS09475 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001375|IPR011042|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|Six-bladed beta-propeller, TolB-like GO:0006508|GO:0008236 G3DSA:2.120.10.30|G3DSA:3.40.50.1820|PF00326|SSF53474|SSF82171 ALFP_RS09480 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006139|IPR006140|IPR016040|IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00670|SSF51735|SSF52283 ALFP_RS09485 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 ALFP_RS09490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016040|IPR020828|IPR020829|IPR020830|IPR020831 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, active site|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain GO:0016620|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00044|PF02800|PIRSF000149|PR00078|PS00071|SM00846|SSF51735|SSF55347 ALFP_RS09495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000362|IPR005677|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083 Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate hydratase, class II|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004333|GO:0006099|GO:0006106|GO:0016829|GO:0045239 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00743|PF00206|PF10415|PR00145|PR00149|PS00163|SSF48557|TIGR00979 ALFP_RS09500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011041|IPR011042|IPR012938 Glucose/Sorbosone dehydrogenase|Six-bladed beta-propeller, TolB-like|Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824|GO:0005975|GO:0016901|GO:0048038 G3DSA:2.120.10.30|PF07995|SSF50952 ALFP_RS09505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 ALFP_RS09510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 ALFP_RS09515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002324|IPR009056 Cytochrome c, class ID|Cytochrome c-like domain GO:0005506|GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PR00606|SSF46626 ALFP_RS09520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR011051|IPR014710|IPR018060 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF02311|PF12833|SM00342|SSF46689|SSF51182 ALFP_RS09525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|SM01007|SSF53639 ALFP_RS09530 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 ALFP_RS09535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|SSF53720 ALFP_RS09540 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01494|PR00420|SSF51905 ALFP_RS09545 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS09550 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PR01415|SM00248|SSF48403 ALFP_RS09555 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS09560 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025421 Protein of unknown function DUF4148 PF13663 ALFP_RS09565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001757|IPR006121|IPR006122|IPR008250|IPR017969|IPR018303|IPR023214|IPR023299|IPR027256 HAD-like domain|Heavy metal-associated domain, HMA|Heavy metal-associated domain, copper ion-binding|Heavy-metal-associated, conserved site|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0005507|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.30.70.100|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00403|PF00702|PR00119|PR00943|PS00154|PS01047|SSF55008|SSF56784|SSF81653|SSF81665|TIGR00003|TIGR01494|TIGR01511|TIGR01525 ALFP_RS09570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR019884 YtoQ family protein PF11071|TIGR03646 ALFP_RS09580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001853|IPR012336|IPR023169 DSBA-like thioredoxin domain|Thioredoxin-like fold|UPF0413, central domain GO:0015035 G3DSA:1.10.472.60|G3DSA:3.40.30.10|PF01323|SSF52833 ALFP_RS09585 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS09590 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|SSF56349 ALFP_RS09595 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021104 KfrA, N-terminal DNA-binding domain PF11740 ALFP_RS09600 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002355|IPR008972|IPR011706|IPR011707 Cupredoxin|Multicopper oxidase, copper-binding site|Multicopper oxidase, type 2|Multicopper oxidase, type 3 GO:0005507|GO:0016491|GO:0055114 G3DSA:2.60.40.420|PF07731|PF07732|PS00080|SSF49503 ALFP_RS09605 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003135|IPR005862|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylglycinamide formyltransferase 2|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0000287|GO:0003824|GO:0004644|GO:0005524|GO:0009152|GO:0016742 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_01643|PF02222|SSF51246|SSF52440|SSF56059|TIGR01142 ALFP_RS09615 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR022488|IPR022489|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Polyphosphate kinase-2-related|Polyphosphate:AMP phosphotransferase GO:0006797|GO:0043751 G3DSA:3.40.50.300|PF03976|SSF52540|TIGR03708 ALFP_RS09620 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735 ALFP_RS09625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 ALFP_RS09630 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|SSF56349 ALFP_RS09635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012550 Protein of unknown function DUF1706 PF08020|PIRSF031551 ALFP_RS09645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016021|GO:0022904 G3DSA:1.20.950.20|PF01292|SSF81342 ALFP_RS09650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007372 Lipid/polyisoprenoid-binding, YceI-like G3DSA:2.40.128.110|PF04264|SM00867|SSF101874 ALFP_RS09655 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007372 Lipid/polyisoprenoid-binding, YceI-like G3DSA:2.40.128.110|PF04264|SM00867|SSF101874 ALFP_RS09660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006659|IPR006660|IPR012336 Arsenate reductase|Arsenate reductase-like|Thioredoxin-like fold GO:0008794|GO:0055114 G3DSA:3.40.30.10|PF03960|SSF52833|TIGR00014 ALFP_RS09665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 ALFP_RS09670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021729|IPR025303 Domain of unknown function DUF3298|Domain of unknown function DUF4163 G3DSA:3.30.565.40|G3DSA:3.90.640.20|PF11738 ALFP_RS09675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005025|IPR021250|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like|Protein of unknown function DUF2789 GO:0016491 G3DSA:3.40.50.360|PF03358|PF10982|SSF52218 ALFP_RS09680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PR01415|SM00248|SSF48403 ALFP_RS09685 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001130|IPR015991|IPR018228|IPR032466 Deoxyribonuclease, TatD-related, conserved site|Metal-dependent hydrolase|TatD family|Uncharacterised hydrolase TatD-type GO:0004536|GO:0016788|GO:0016888 G3DSA:3.20.20.140|PF01026|PIRSF005902|PS01090|PS01091|PS01137|SSF51556|TIGR00010 ALFP_RS09690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004622|IPR027417 DNA polymerase III, delta prime subunit|P-loop containing nucleoside triphosphate hydrolase GO:0003887|GO:0006260|GO:0008408 G3DSA:3.40.50.300|PF13177|SSF52540|TIGR00678 ALFP_RS09695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 ALFP_RS09700 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003770|IPR013087 Uncharacterised protein family UPF0755, YceG-like|Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 G3DSA:3.30.160.60|PF02618|TIGR00247 ALFP_RS09705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006222|IPR017703 Glycine cleavage T-protein-like, N-terminal|YgfZ/GcvT conserved site G3DSA:3.30.70.1400|PF01571|SSF103025|TIGR03317 ALFP_RS09710 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002204|IPR006115|IPR008927|IPR011548|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase|3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0008442|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PS00895|SSF48179|SSF51735|TIGR01692 ALFP_RS09715 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029045|IPR032259 ClpP/crotonase-like domain|Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 G3DSA:3.90.226.10|PF16113|SSF52096 ALFP_RS09720 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00072|PS00073|SSF47203|SSF56645 ALFP_RS09725 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001374|IPR005346|IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|R3H domain|RnfH protein GO:0003676 G3DSA:3.10.20.280|MF_00460|PF01424|PF03658|SSF54285 ALFP_RS09730 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005031|IPR023393 Coenzyme Q-binding protein COQ10, START domain|START-like domain G3DSA:3.30.530.20|PF03364|SSF55961 ALFP_RS09735 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000037|IPR020081|IPR023620 Small protein B|SsrA-binding protein|SsrA-binding protein, conserved site GO:0003723 G3DSA:2.40.280.10|MF_00023|PD004488|PF01668|PS01317|SSF74982|TIGR00086 ALFP_RS09740 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00411|SSF51905 ALFP_RS09750 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000121|IPR002192|IPR006319|IPR008279|IPR013815|IPR013816|IPR015813|IPR018274|IPR023151 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphoenolpyruvate synthase|Pyruvate phosphate dikinase, PEP/pyruvate-binding|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0005524|GO:0006090|GO:0008986|GO:0016301|GO:0016310|GO:0016772 G3DSA:3.20.20.60|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.50.30.10|PF00391|PF01326|PF02896|PIRSF000854|PS00370|PS00742|SSF51621|SSF52009|SSF56059|TIGR01418 ALFP_RS09755 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005177|IPR026530 Bifunctional kinase-pyrophosphorylase|Phosphoenolpyruvate synthase regulatory protein GO:0005524|GO:0016772 MF_01062|PF03618 ALFP_RS09760 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023631 Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304 ALFP_RS09765 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001537|IPR029026|IPR029028|IPR029064 50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:3.40.1280.10|PF00588|SSF55315|SSF75217 ALFP_RS09770 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012337|IPR022898|IPR024567 Ribonuclease H-like domain|Ribonuclease HII|Ribonuclease HII/HIII domain GO:0003676|GO:0004523 G3DSA:3.30.420.10|MF_00052_B|PF01351|SSF53098 ALFP_RS09775 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 G3DSA:3.40.50.2000|MF_00392|PF02684|SSF53756|TIGR00215 ALFP_RS09780 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001451|IPR010137|IPR011004|IPR029098 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase|Hexapeptide repeat|Trimeric LpxA-like|Udp N-acetylglucosamine O-acyltransferase, C-terminal GO:0008610|GO:0008780 G3DSA:1.20.1180.10|G3DSA:2.160.10.10|MF_00387|PF00132|PF13720|PIRSF000456|SSF51161|TIGR01852 ALFP_RS09785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010084|IPR013114|IPR029069 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ|Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain GO:0005737|GO:0006633|GO:0016836 G3DSA:3.10.129.10|MF_00406|PF07977|SSF54637|TIGR01750 ALFP_RS09790 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001451|IPR007691|IPR011004|IPR020573 Hexapeptide repeat|Trimeric LpxA-like|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016410|GO:0016747 G3DSA:2.160.10.10|MF_00523|PF00132|PF04613|PF14602|SSF51161|TIGR01853 ALFP_RS09795 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005632|IPR024930 Chaperone protein Skp|Skp domain GO:0051082 G3DSA:3.30.910.20|PF03938|PIRSF002094|SM00935|SSF111384 ALFP_RS09800 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000184|IPR010827|IPR023707 Bacterial surface antigen (D15)|Outer membrane protein assembly factor BamA|Surface antigen variable number GO:0019867|GO:0071709 G3DSA:2.40.160.50|MF_01430|PF01103|PF07244|PIRSF006076|TIGR03303 ALFP_RS09805 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001478|IPR004387|IPR008915 PDZ domain|Peptidase M50|Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0005515|GO:0006508|GO:0016021 G3DSA:2.30.42.10|PF02163|PF13180|SM00228|SSF50156|TIGR00054 ALFP_RS09810 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003821|IPR013512|IPR013644|IPR016040|IPR026877 1-deoxy-D-xylulose 5-phosphate reductoisomerase|1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal|1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal|DXP reductoisomerase C-terminal domain|NAD(P)-binding domain GO:0005515|GO:0008299|GO:0030604|GO:0046872|GO:0055114|GO:0070402 G3DSA:1.10.1740.10|G3DSA:3.40.50.720|MF_00183|PF02670|PF08436|PF13288|PIRSF006205|SSF51735|SSF55347|SSF69055|TIGR00243 ALFP_RS09815 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 PF01148|PS01315 ALFP_RS09820 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001441|IPR018520 Decaprenyl diphosphate synthase-like|Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 G3DSA:3.40.1180.10|MF_01139|PF01255|PS01066|SSF64005|TIGR00055 ALFP_RS09825 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002661|IPR023584 Ribosome recycling factor|Ribosome recycling factor domain GO:0006412 G3DSA:1.10.132.20|MF_00040|PF01765|SSF55194|TIGR00496 ALFP_RS09830 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001048|IPR011817|IPR015963 Aspartate/glutamate/uridylate kinase|Uridylate kinase|Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0009041|GO:0033862 G3DSA:3.40.1160.10|MF_01220_B|PF00696|PIRSF005650|SSF53633|TIGR02075 ALFP_RS09835 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001816|IPR009060|IPR014039|IPR018101 Translation elongation factor EFTs/EF1B|Translation elongation factor EFTs/EF1B, dimerisation|Translation elongation factor Ts, conserved site|UBA-like GO:0003746|GO:0005515|GO:0005622|GO:0006414 G3DSA:1.10.286.20|G3DSA:1.10.8.10|G3DSA:3.30.479.20|MF_00050|PF00889|PS01127|SSF46934|SSF54713|TIGR00116 ALFP_RS09840 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001865|IPR005706|IPR018130|IPR023591 Ribosomal protein S2|Ribosomal protein S2, bacteria/mitochondria/plastid|Ribosomal protein S2, conserved site|Ribosomal protein S2, flavodoxin-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:1.10.287.610|G3DSA:3.40.50.10490|MF_00291_B|PF00318|PR00395|PS00962|SSF52313|TIGR01011 ALFP_RS09845 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000994|IPR001714|IPR002467 Peptidase M24, methionine aminopeptidase|Peptidase M24, structural domain|Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 G3DSA:3.90.230.10|MF_01974|PF00557|PR00599|PS00680|SSF55920|TIGR00500 ALFP_RS09850 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002934|IPR003607|IPR006674|IPR010043|IPR013546 Bifunctional uridylyltransferase/uridylyl-removing enzyme|HD domain|HD/PDEase domain|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase|Polymerase, nucleotidyl transferase domain GO:0006807|GO:0008773|GO:0016779 G3DSA:1.10.3210.10|G3DSA:3.30.460.10|G3DSA:3.30.70.260|MF_00277|PF01909|PF01966|PF08335|PIRSF006288|SM00471|SSF109604|SSF55021|SSF81301|TIGR01693 ALFP_RS09855 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PF01914|TIGR00427 ALFP_RS09860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003752|IPR023380 Disulphide bond formation protein DsbB-like domain|Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 G3DSA:1.20.1550.10|PF02600|SSF158442 ALFP_RS09865 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 ALFP_RS09870 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000836|IPR005854|IPR029055|IPR029057 Amidophosphoribosyltransferase|Nucleophile aminohydrolases, N-terminal|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004044|GO:0009113|GO:0009116 G3DSA:3.40.50.2020|G3DSA:3.60.20.10|MF_01931|PF00156|PF13522|PIRSF000485|SSF53271|SSF56235|TIGR01134 ALFP_RS09875 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PF02674 ALFP_RS09880 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|SSF110997 ALFP_RS09885 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001645|IPR004101|IPR013221 Folylpolyglutamate synthetase|Mur ligase, C-terminal|Mur ligase, central GO:0004326|GO:0005524|GO:0009058|GO:0009396|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.90.190.20|PF02875|PF08245|SSF53244|SSF53623|TIGR01499 ALFP_RS09890 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000089|IPR003016|IPR004099|IPR006258|IPR011053|IPR012999|IPR016156|IPR023753 2-oxo acid dehydrogenase, lipoyl-binding site|Biotin/lipoyl attachment|Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain|Single hybrid motif GO:0004148|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:2.40.50.100|G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF00364|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|PS00189|SSF51230|SSF51905|SSF55424|TIGR01350 ALFP_RS09895 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000089|IPR001078|IPR003016|IPR004167|IPR006256|IPR011053|IPR023213 2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain|Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex|E3-binding domain|Single hybrid motif GO:0004742|GO:0006096|GO:0008152|GO:0016746|GO:0045254 G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PS00189|SSF47005|SSF51230|SSF52777|TIGR01348 ALFP_RS09900 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004660|IPR005474|IPR009014|IPR029061 2-oxo-acid dehydrogenase E1 component homodimeric type|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase, N-terminal GO:0003824|GO:0008152|GO:0016491|GO:0055114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PIRSF000156|SSF52518|SSF52922|TIGR00759 ALFP_RS09905 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013656 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF08448|PF13188|PR00344|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 ALFP_RS09910 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 ALFP_RS09915 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000672|IPR016040|IPR020630|IPR020631|IPR020867 NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase|Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0004488|GO:0009396|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_01576|PF00763|PF02882|PR00085|PS00766|PS00767|SSF51735|SSF53223 ALFP_RS09920 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001567|IPR024077|IPR024079|IPR024080 Metallopeptidase, catalytic domain|Neurolysin/Thimet oligopeptidase, N-terminal|Neurolysin/Thimet oligopeptidase, domain 2|Peptidase M3A/M3B GO:0004222|GO:0006508|GO:0008237 G3DSA:1.10.1370.10|G3DSA:1.20.1050.40|G3DSA:3.40.390.10|PF01432|SSF55486 ALFP_RS09925 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003782|IPR012336 Copper chaperone SCO1/SenC|Thioredoxin-like fold G3DSA:3.40.30.10|PF02630|SSF52833 ALFP_RS09930 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000640|IPR000795|IPR004161|IPR004540|IPR005225|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417|IPR031157 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00054_B|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|PS00301|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231|TIGR00484 ALFP_RS09935 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|SM00418|SSF46785 ALFP_RS09940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004099|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|SSF51905|SSF55424 ALFP_RS09945 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|PR00040|PS00552|SM00422|SSF46955 ALFP_RS09950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000415|IPR026021|IPR029479 Nitroreductase|Nitroreductase-like|Putative NAD(P)H nitroreductase YdjA-like GO:0016491 G3DSA:3.40.109.10|PF00881|PIRSF000232|SSF55469 ALFP_RS09955 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004569|IPR013785 Aldolase-type TIM barrel|Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0003824|GO:0005737|GO:0008615|GO:0033856 G3DSA:3.20.20.70|MF_00279|PF03740|SSF63892|TIGR00559 ALFP_RS09960 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|PF02321|SSF56954|TIGR01845 ALFP_RS09965 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866|TIGR00915 ALFP_RS09970 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 ALFP_RS09975 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS09980 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS09985 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007487|IPR028082 ABC transporter, substrate-binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF04392|SSF53822 ALFP_RS09990 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 ALFP_RS10000 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002155|IPR016039|IPR020610|IPR020615|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00099|SSF53901|TIGR01930 ALFP_RS10005 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PIRSF006276|PR01438|SSF52402 ALFP_RS10010 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF13714|SSF51621 ALFP_RS10015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS10020 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000310|IPR005308|IPR008286|IPR011193|IPR015421|IPR015422|IPR015424 Orn/Lys/Arg decarboxylase, C-terminal|Orn/Lys/Arg decarboxylase, N-terminal|Orn/Lys/Arg decarboxylase, major domain|Ornithine/lysine/arginine decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0005737|GO:0006520|GO:0016831 G3DSA:3.40.640.10|G3DSA:3.90.100.10|G3DSA:3.90.1150.10|PF01276|PF03709|PF03711|PIRSF009393|PS00703|SSF53383|SSF55904 ALFP_RS10030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004808|IPR005135 AP endonuclease 1|Endonuclease/exonuclease/phosphatase GO:0004518|GO:0006281 G3DSA:3.60.10.10|PF03372|SSF56219|TIGR00195|TIGR00633 ALFP_RS10040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008145|IPR017665|IPR020590|IPR027417 Guanylate kinase|Guanylate kinase, conserved site|Guanylate kinase/L-type calcium channel beta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0004385|GO:0006163 G3DSA:3.30.63.10|G3DSA:3.40.50.300|MF_00328|PF00625|PS00856|SM00072|SSF52540|TIGR03263 ALFP_RS10045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003716|IPR006110|IPR012293 DNA-directed RNA polymerase, omega subunit|RNA polymerase subunit, RPB6/omega|RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 G3DSA:3.90.940.10|MF_00366|PF01192|SM01409|SSF63562|TIGR00690 ALFP_RS10050 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002912|IPR003607|IPR004095|IPR004811|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain|HD/PDEase domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like GO:0008152|GO:0015969|GO:0016597 G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|SM00471|SM00954|SSF109604|SSF55021|SSF81271|SSF81301|TIGR00691 ALFP_RS10055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008407 Branched-chain amino acid transport, AzlD PF05437 ALFP_RS10060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011606 Branched-chain amino acid transport, permease PF03591 ALFP_RS10065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.60.40.1590|G3DSA:2.70.70.10|PF01551|SSF51261 ALFP_RS10070 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000297|IPR023058|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site|Trigger factor/SurA domain GO:0016853 G3DSA:3.10.50.40|PF00639|PF13624|PS01096|SSF109998|SSF54534 ALFP_RS10075 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017946|IPR030395 Glycerophosphodiester phosphodiesterase domain|PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 G3DSA:3.20.20.190|PF03009|SSF51695 ALFP_RS10080 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007473|IPR029063 Ribosomal RNA large subunit methyltransferase J|S-adenosyl-L-methionine-dependent methyltransferase GO:0008649|GO:0070475 G3DSA:3.40.50.150|MF_00934|PF04378|SSF53335 ALFP_RS10085 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000748|IPR002942|IPR006145|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|PF00849|PF01479|SM00363|SSF55120|SSF55174|TIGR00093 ALFP_RS10090 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007440|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 G3DSA:3.40.1410.10|MF_01632|PF04345|SSF64288 ALFP_RS10095 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS10100 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR020471|IPR023210 Aldo/keto reductase|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|SSF51430 ALFP_RS10105 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002187|IPR002332|IPR011322|IPR015867|IPR017918 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PIRSF039144|PR00340|PS00496|PS00638|SM00938|SSF54913 ALFP_RS10110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006685|IPR010920 LSM domain|Mechanosensitive ion channel MscS GO:0016020|GO:0055085 G3DSA:2.30.30.60|PF00924|SSF50182 ALFP_RS10115 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000362|IPR008948|IPR009049|IPR020557|IPR022761|IPR024083|IPR029419 Argininosuccinate lyase|Argininosuccinate lyase, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004056|GO:0042450 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00006|PF00206|PF14698|PR00145|PR00149|PS00163|SSF48557|TIGR00838 ALFP_RS10120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000600 ROK family G3DSA:3.30.420.40|PF00480|SSF53067 ALFP_RS10125 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002692|IPR014395|IPR023343|IPR029055 Nucleophile aminohydrolases, N-terminal|Penicillin acylase|Penicillin amidase type, domain1|Penicillin/cephalosporin acylase GO:0016787|GO:0016811|GO:0017000 G3DSA:1.10.287.150|G3DSA:1.10.439.10|G3DSA:2.30.120.10|G3DSA:3.60.20.10|PF01804|PIRSF001227|SSF56235 ALFP_RS10130 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|SSF51905 ALFP_RS10135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR004111|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR, C-terminal|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677|GO:0045892 G3DSA:1.10.357.10|PF00440|PF02909|SSF46689|SSF48498 ALFP_RS10140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001566|IPR010280|IPR012340|IPR029063|IPR030390|IPR030391 (Uracil-5)-methyltransferase family|23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD|Nucleic acid-binding, OB-fold|RNA methyltransferase TrmA, active site|RNA methyltransferase TrmA, conserved site|S-adenosyl-L-methionine-dependent methyltransferase GO:0003723|GO:0006396|GO:0008173 G3DSA:2.40.50.140|G3DSA:3.40.50.150|MF_01010|PF05958|PS01230|PS01231|SSF50249|SSF53335|TIGR00479 ALFP_RS10145 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011055|IPR016047|IPR018392 Duplicated hybrid motif|LysM domain|Peptidase M23 G3DSA:2.70.70.10|G3DSA:3.10.350.10|PF01476|PF01551|SM00257|SSF51261 ALFP_RS10150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000682|IPR029063 Protein-L-isoaspartate(D-aspartate) O-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0004719|GO:0006464 G3DSA:3.40.50.150|MF_00090|PF01135|PS01279|SSF53335|TIGR00080 ALFP_RS10155 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002828|IPR030048 Survival protein SurE|Survival protein SurE-like phosphatase/nucleotidase GO:0008252|GO:0016787 G3DSA:3.40.1210.10|MF_00060|PF01975|SSF64167|TIGR00087 ALFP_RS10160 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 MF_01043|PF02660|SM01207|TIGR00023 ALFP_RS10165 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000905|IPR017861|IPR022450 Gcp-like domain|Kae1/TsaD family|tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 G3DSA:3.30.420.40|MF_01445|PF00814|PR00789|SSF53067|TIGR00329|TIGR03723 ALFP_RS10170 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006043|IPR026033 Purine permease PbuG-like|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00860|PIRSF005353 ALFP_RS10175 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PR00421|PS00194|SSF52833|TIGR01068 ALFP_RS10180 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018592|IPR023122 NE1680-like domain|Protein of unknown function DUF2024 G3DSA:3.10.510.10|PF09630|SSF160766 ALFP_RS10185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012336|IPR013740 Redoxin|Thioredoxin-like fold GO:0016491 G3DSA:3.40.30.10|PF08534|SSF52833 ALFP_RS10190 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000640|IPR001498|IPR009022|IPR015269|IPR020568 Elongation factor G, III-V domain|Impact, N-terminal|Ribosomal protein S5 domain 2-type fold|Translation elongation factor EFG, V domain|Uncharacterised domain UPF0029, Impact, C-terminal G3DSA:3.30.230.30|G3DSA:3.30.70.240|PF01205|PF09186|SSF54211|SSF54980 ALFP_RS10195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|SM00382|SSF52540 ALFP_RS10200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003507|IPR027461|IPR027478|IPR029062 Class I glutamine amidotransferase-like|LD-carboxypeptidase A, C-terminal domain|Murein tetrapeptide carboxypeptidase, N-terminal domain|Peptidase family S66 G3DSA:3.40.50.10740|G3DSA:3.50.30.60|PF02016|PIRSF028757|SSF141986|SSF52317 ALFP_RS10205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016192|IPR016193|IPR028883 APOBEC/CMP deaminase, zinc-binding|Cytidine deaminase-like|tRNA-specific adenosine deaminase GO:0002100|GO:0003824|GO:0008251|GO:0008270|GO:0016787 G3DSA:3.40.140.10|MF_00972|PF14437|PS00903|SSF53927 ALFP_RS10210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS10215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PIRSF006648|PR00164 ALFP_RS10220 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 ALFP_RS10225 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007551 Protein of unknown function DUF520 G3DSA:3.30.70.860|G3DSA:3.30.70.990|MF_00632|PF04461|SSF89963 ALFP_RS10230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 ALFP_RS10235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MF_00454|PF02537|TIGR00494 ALFP_RS10240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase G3DSA:3.40.50.880|PF00117|SSF52317 ALFP_RS10245 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR011051|IPR014710|IPR018060|IPR018062|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF02311|PF12833|PR00032|PS00041|SM00342|SSF46689|SSF51182 ALFP_RS10250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016833 Putative sodium bile acid cotransporter PF13593|PIRSF026166 ALFP_RS10255 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000866|IPR001640|IPR012336|IPR017937 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Prolipoprotein diacylglyceryl transferase|Thioredoxin, conserved site|Thioredoxin-like fold GO:0009249|GO:0016020|GO:0016209|GO:0016491|GO:0016757|GO:0042158|GO:0045454|GO:0055114 G3DSA:3.40.30.10|PF00578|PF01790|PS00194|SSF52833 ALFP_RS10260 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001240|IPR011060|IPR013785 Aldolase-type TIM barrel|N-(5'phosphoribosyl) anthranilate isomerase (PRAI)|Ribulose-phosphate binding barrel GO:0003824|GO:0004640|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00135|PF00697|SSF51366 ALFP_RS10265 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PF06808 ALFP_RS10270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 ALFP_RS10275 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001406|IPR020094|IPR020095|IPR020097|IPR020103 Pseudouridine synthase I, TruA|Pseudouridine synthase I, TruA, C-terminal|Pseudouridine synthase I, TruA, N-terminal|Pseudouridine synthase I, TruA, alpha/beta domain|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.70.580|G3DSA:3.30.70.660|MF_00171|PF01416|PIRSF001430|SSF55120|TIGR00071 ALFP_RS10280 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018392|IPR020012 LysM domain|Motility protein FimV, N-terminal G3DSA:3.10.350.10|PF01476|TIGR03505 ALFP_RS10285 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000319|IPR000534|IPR011534|IPR012080|IPR012280|IPR016040 Aspartate-semialdehyde dehydrogenase|Aspartate-semialdehyde dehydrogenase, conserved site|Aspartate-semialdehyde dehydrogenase, gamma-type|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0004073|GO:0005737|GO:0006520|GO:0008652|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0016620|GO:0046983|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_02121|PF01118|PF02774|PIRSF000148|PS01103|SM00859|SSF51735|SSF55347|TIGR01745 ALFP_RS10290 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004429|IPR019818|IPR024084 Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0003862|GO:0005737|GO:0009098|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_01033|PF00180|PS00470|SM01329|SSF53659|TIGR00169 ALFP_RS10295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000573|IPR004431|IPR015928 3-isopropylmalate dehydratase, small subunit|Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase/3-isopropylmalate dehydratase, swivel GO:0003861|GO:0008152|GO:0009098|GO:0009316 G3DSA:3.20.19.10|MF_01031|PF00694|SSF52016|TIGR00171 ALFP_RS10300 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001030|IPR004430|IPR015931|IPR015932|IPR018136 3-isopropylmalate dehydratase, large subunit|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0003861|GO:0008152|GO:0009098|GO:0051539 G3DSA:3.30.499.10|G3DSA:3.40.1060.10|MF_01026|PF00330|PR00415|PS00450|PS01244|SSF53732|TIGR00170 ALFP_RS10305 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|PF00155|PF00392|SM00345|SSF46785|SSF53383 ALFP_RS10310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118|TIGR00778 ALFP_RS10315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005624 Haem-degrading PF03928|SSF143744 ALFP_RS10320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 ALFP_RS10325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55874 ALFP_RS10330 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435 ALFP_RS10335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000453|IPR020541 Chorismate synthase|Chorismate synthase, conserved site GO:0004107|GO:0009073 G3DSA:3.60.150.10|MF_00300|PF01264|PIRSF001456|PS00787|PS00788|PS00789|SSF103263|TIGR00033 ALFP_RS10340 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003846 Uncharacterised protein family UPF0061 MF_00692|PF02696 ALFP_RS10345 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018643 Protein of unknown function DUF2069, membrane PF09842 ALFP_RS10350 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011991|IPR017039|IPR023679 Uncharacterised protein family UPF0761, bacterial|Virulence factor BrkB|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|MF_00672|PF03631|TIGR00765 ALFP_RS10355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|SM00116|SSF54631 ALFP_RS10360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001269|IPR004653|IPR013785|IPR018517 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0003824|GO:0008033|GO:0017150|GO:0050660|GO:0055114 G3DSA:3.20.20.70|MF_02041|PF01207|PIRSF006621|PS01136|SSF51395 ALFP_RS10365 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002575|IPR005280|IPR011009 Aminoglycoside phosphotransferase|Homoserine kinase ThrB|Protein kinase-like domain GO:0004413|GO:0009088 G3DSA:3.30.200.20|G3DSA:3.90.1200.10|MF_00301|PF01636|SSF56112|TIGR00938 ALFP_RS10380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018076 Type II secretion system F domain PF00482 ALFP_RS10385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018076 Type II secretion system F domain PF00482 ALFP_RS10390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000253|IPR001482|IPR008984|IPR027417 Forkhead-associated (FHA) domain|P-loop containing nucleoside triphosphate hydrolase|SMAD/FHA domain|Type II secretion system protein E GO:0005515|GO:0005524|GO:0006810 G3DSA:2.60.200.20|G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PF00498|SM00240|SSF49879|SSF52540 ALFP_RS10395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001775|IPR004845|IPR004846|IPR032789 GspD/PilQ family|Pilus formation protein, N-terminal|Type II secretion system GspD, conserved site|Type II/III secretion system GO:0008565|GO:0009306 PF00263|PF13629|PR00811|PS00875 ALFP_RS10400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013974|IPR017592|IPR031571 Flp pilus assembly protein RcpC/CpaB domain|Pilus assembly, Flp-type CpaB|SAF domain PF08666|PF16976|SM00858|TIGR03177 ALFP_RS10425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|SSF56529 ALFP_RS10430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 G3DSA:3.90.80.10|MF_00209|PF00719|PS00387|SSF50324 ALFP_RS10435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005254|IPR010817|IPR011990|IPR019734 HemY, N-terminal|Heme biosynthesis-associated TPR protein|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515|GO:0016020|GO:0042168 G3DSA:1.25.40.10|PF07219|PF13181|SSF48452|TIGR00540 ALFP_RS10440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX PF04375 ALFP_RS10445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 G3DSA:3.40.50.10090|PF02602|SSF69618 ALFP_RS10450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000860|IPR022417|IPR022418|IPR022419 Porphobilinogen deaminase|Porphobilinogen deaminase, C-terminal|Porphobilinogen deaminase, N-terminal|Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 G3DSA:3.30.160.40|G3DSA:3.40.190.10|MF_00260|PF01379|PF03900|PIRSF001438|PR00151|PS00533|SSF53850|SSF54782|TIGR00212 ALFP_RS10455 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005496|IPR022301 Integral membrane protein TerC|Integral membrane protein YjbE GO:0016021 PF03741|TIGR03717 ALFP_RS10460 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003781|IPR005810|IPR005811|IPR016040|IPR016102|IPR017440 ATP-citrate lyase/succinyl-CoA ligase|ATP-citrate lyase/succinyl-CoA ligase, active site|CoA-binding|NAD(P)-binding domain|Succinyl-CoA ligase, alpha subunit|Succinyl-CoA synthetase-like GO:0003824|GO:0008152|GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF00549|PF02629|PIRSF001553|PR01798|PS00399|PS01216|SM00881|SSF51735|SSF52210|TIGR01019 ALFP_RS10465 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005809|IPR005811|IPR013650|IPR013815|IPR013816|IPR016102|IPR017866 ATP-citrate lyase/succinyl-CoA ligase|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|ATP-grasp fold, succinyl-CoA synthetase-type|Succinyl-CoA synthetase, beta subunit|Succinyl-CoA synthetase, beta subunit, conserved site|Succinyl-CoA synthetase-like GO:0003824|GO:0005524|GO:0008152 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.261|MF_00558|PF00549|PF08442|PIRSF001554|PS01217|SSF52210|SSF56059|TIGR01016 ALFP_RS10470 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021312 Protein of unknown function DUF2889 PF11136 ALFP_RS10475 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002629|IPR006276|IPR013215 Cobalamin-independent methionine synthase|Cobalamin-independent methionine synthase MetE, C-terminal/archaeal|Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652|GO:0009086 G3DSA:3.20.20.210|MF_00172|PF01717|PF08267|PIRSF000382|SSF51726|TIGR01371 ALFP_RS10480 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS10485 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003783|IPR011991 Regulatory protein RecX|Winged helix-turn-helix DNA-binding domain GO:0006282 G3DSA:1.10.10.10|MF_01114|PF02631 ALFP_RS10490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003593|IPR013765|IPR020584|IPR023400|IPR027417 AAA+ ATPase domain|DNA recombination and repair protein RecA|DNA recombination and repair protein RecA, C-terminal|DNA recombination/repair protein RecA, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003697|GO:0005524|GO:0006259|GO:0006281|GO:0008094 G3DSA:3.30.250.10|G3DSA:3.40.50.300|MF_00268|PF00154|PR00142|PS00321|SM00382|SSF52540|SSF54752|TIGR02012 ALFP_RS10495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 ALFP_RS10500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003594|IPR003661|IPR004358|IPR013727 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Two-component sensor kinase, N-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PF08521|PR00344|SM00387|SM00388|SSF47384|SSF55874 ALFP_RS10505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005828|IPR005829|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PS00217|SSF103473 ALFP_RS10510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007476 Putative exonuclease, RdgC GO:0006310 MF_00194|PF04381 ALFP_RS10515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009057|IPR018060|IPR032687 DNA binding HTH domain, AraC-type|HTH-type transcriptional regulator AraC-type, N-terminal|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12625|PF12833|SM00342|SSF46689 ALFP_RS10520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 ALFP_RS10525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|SSF52096 ALFP_RS10530 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007436 Protein of unknown function DUF485 PF04341 ALFP_RS10535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001734|IPR018212 Sodium/solute symporter|Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474|PS00456|TIGR00813 ALFP_RS10540 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010061|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase|Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|SSF53720|TIGR01722 ALFP_RS10545 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002082|IPR006130|IPR006131|IPR006132 Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|PF00185|PF02729|PR00100|PR00101|PS00097|SSF53671|TIGR00670 ALFP_RS10560 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001264|IPR001460|IPR009647|IPR011815|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein 1C|Penicillin-binding protein, transpeptidase|Penicillin-binding, C-terminal GO:0008658|GO:0008955|GO:0009252 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PF06832|SSF53955|SSF56601|TIGR02073 ALFP_RS10565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001599|IPR002890|IPR008930|IPR011625|IPR021868 Alpha-2-macroglobulin|Alpha-2-macroglobulin MG1 domain|Alpha-2-macroglobulin, N-terminal|Alpha-2-macroglobulin, N-terminal 2|Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid GO:0004866 PF00207|PF01835|PF07703|PF11974|SM01359|SM01360|SSF48239 ALFP_RS10575 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004136|IPR013785 Aldolase-type TIM barrel|Nitronate monooxygenase GO:0003824|GO:0018580|GO:0055114 G3DSA:3.20.20.70|PF03060|SSF51412 ALFP_RS10580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004558|IPR006638|IPR007197|IPR010723|IPR023404 Coproporphyrinogen III oxidase, oxygen-independent, HemN|Elongator protein 3/MiaB/NifB|HemN, C-terminal|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114 G3DSA:3.80.30.20|PF04055|PF06969|PIRSF000167|SM00729|SSF102114|TIGR00538 ALFP_RS10585 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001516|IPR001750|IPR007182|IPR025383 Domain of unknown function DUF4040|NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|Na+/H+ antiporter MnhB subunit-related protein PF00361|PF00662|PF04039|PF13244|PR01434 ALFP_RS10590 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PF00420 ALFP_RS10595 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PF00361 ALFP_RS10600 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 PF01899|PIRSF019239 ALFP_RS10605 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 PF04066|PIRSF028784 ALFP_RS10610 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 PF03334|TIGR01300 ALFP_RS10620 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS10625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011051|IPR014710|IPR025979 ChrR-like cupin domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF12973|SSF51182 ALFP_RS10630 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000813|IPR017896|IPR017900|IPR022569 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|7Fe ferredoxin|Ferredoxin, C-terminal GO:0009055 G3DSA:3.30.70.20|PF11953|PF13187|PR00354|PS00198|SSF54862 ALFP_RS10635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001387|IPR010982|IPR011051|IPR013096|IPR014710 Cro/C1-type helix-turn-helix domain|Cupin 2, conserved barrel|Lambda repressor-like, DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF07883|PF13560|SM00530|SSF47413|SSF51182 ALFP_RS10640 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|SSF52317 ALFP_RS10645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003855|IPR023051 Potassium transporter|Potassium uptake protein, low affinity, Kup GO:0015079|GO:0016020|GO:0071805 MF_01522|PF02705 ALFP_RS10650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55874 ALFP_RS10655 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 ALFP_RS10660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472 ALFP_RS10665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618 ALFP_RS10670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF03544|PR01217|SSF74653|TIGR01352 ALFP_RS10675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR005666|IPR008995|IPR017871|IPR024765|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Sulphate transport system permease protein 1|TOBE-like domain GO:0005524|GO:0006810|GO:0016020|GO:0016887|GO:0042626 G3DSA:3.40.50.300|PF00005|PF12857|PS00211|SM00382|SSF50331|SSF52540|TIGR00968 ALFP_RS10680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR005667|IPR011866 ABC transporter type 1, transmembrane domain MetI-like|Sulphate ABC transporter permease protein 2|Sulphate ABC transporter, permease protein CysW GO:0006810|GO:0008272|GO:0015116|GO:0015419|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR00969|TIGR02140 ALFP_RS10685 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR005667|IPR011865 ABC transporter type 1, transmembrane domain MetI-like|Sulphate ABC transporter permease protein 2|Sulphate ABC transporter, permease protein CysT GO:0006810|GO:0008272|GO:0015116|GO:0015419|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR00969|TIGR02139 ALFP_RS10690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 G3DSA:3.40.190.10|PF13531|SSF53850|TIGR00971 ALFP_RS10695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|SSF53335 ALFP_RS10705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 ALFP_RS10715 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000119|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|PS00045|SM00411|SSF47729 ALFP_RS10720 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000878|IPR003043|IPR006366|IPR014776|IPR014777 Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site|Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008152|GO:0008168|GO:0055114 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|PF00590|PS00839|PS00840|SSF53790|TIGR01469 ALFP_RS10725 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 ALFP_RS10730 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003143|IPR011048 Cytochrome cd1-nitrite reductase, C-terminal domain|Cytochrome cd1-nitrite reductase-like, haem d1 domain G3DSA:2.140.10.20|PF02239|SSF51004 ALFP_RS10740 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000485|IPR011991|IPR019885|IPR019888 AsnC-type HTH domain|Transcription regulator AsnC-type|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|PF13404|PS00519|SM00344|SSF46785 ALFP_RS10745 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|SSF46785 ALFP_RS10750 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007197|IPR013785|IPR017200|IPR023885|IPR023992 4Fe4S-binding SPASM domain|Aldolase-type TIM barrel|Coenzyme PQQ synthesis protein E|Heme D1 biosynthesis, radical SAM protein NirJ|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF13353|PIRSF037420|SSF102114|TIGR04051|TIGR04085 ALFP_RS10760 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000878|IPR006367|IPR014777|IPR016040|IPR019478|IPR028281 NAD(P)-binding domain|Sirohaem synthase, N-terminal|Sirohaem synthase, dimerisation domain|Siroheme synthase, central domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1 GO:0006779|GO:0008152|GO:0008168|GO:0019354|GO:0043115|GO:0055114 G3DSA:1.10.8.210|G3DSA:3.30.160.110|G3DSA:3.40.1010.10|G3DSA:3.40.50.720|PF10414|PF13241|PF14824|SSF51735|SSF53790|SSF75615|TIGR01470 ALFP_RS10765 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626 ALFP_RS10770 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003143|IPR009056|IPR011048|IPR015943 Cytochrome c-like domain|Cytochrome cd1-nitrite reductase, C-terminal domain|Cytochrome cd1-nitrite reductase-like, haem d1 domain|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0009055|GO:0020037 G3DSA:1.10.760.10|G3DSA:2.130.10.10|G3DSA:2.140.10.20|PF02239|PF13442|SSF46626|SSF51004 ALFP_RS10775 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|PF00155|PF00392|SM00345|SSF46785|SSF53383 ALFP_RS10780 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000277|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|SSF53383 ALFP_RS10785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001537|IPR004441|IPR013123|IPR024915|IPR029026|IPR029028|IPR029064 23S rRNA (guanosine-2-O-)-methyltransferase RlmB|50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|RNA 2-O ribose methyltransferase, substrate binding|RNA methyltransferase TrmH family|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|MF_01887|PF00588|PF08032|SM00967|SSF55315|SSF75217|TIGR00186 ALFP_RS10790 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003029|IPR004476|IPR011129|IPR011805|IPR012340|IPR013223|IPR022966|IPR022967 Cold shock protein|Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease B, N-terminal OB domain|Ribonuclease II/R, conserved site|Ribonuclease II/ribonuclease R|Ribonuclease R|S1 domain GO:0003676|GO:0003723|GO:0004518|GO:0004540|GO:0016070 G3DSA:2.40.50.140|MF_01895|PF00575|PF00773|PF08206|PS01175|SM00316|SM00357|SM00955|SSF50249|TIGR00358|TIGR02063 ALFP_RS10800 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 G3DSA:3.30.70.100|PF00403|SSF55008 ALFP_RS10805 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000843|IPR010982|IPR025997|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain|Periplasmic binding protein|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13407|PR00036|PS00356|SM00354|SSF47413|SSF53822 ALFP_RS10810 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 ALFP_RS10815 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 ALFP_RS10820 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 ALFP_RS10825 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 ALFP_RS10830 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF13669|SSF54593 ALFP_RS10835 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000685|IPR017443|IPR020878 Ribulose bisphosphate carboxylase, large chain, active site|Ribulose bisphosphate carboxylase, large subunit, C-terminal|Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0000287|GO:0015977|GO:0016984 G3DSA:3.20.20.110|G3DSA:3.30.70.150|PF00016|PF02788|PS00157|SSF51649|SSF54966 ALFP_RS10840 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010737|IPR031475 Putative nucleotide-binding C-terminal domain|Putative sugar-binding, N-terminal domain PF07005|PF17042|SSF142764 ALFP_RS10855 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007037|IPR013113|IPR017938 FAD-binding 9, siderophore-interacting|Riboflavin synthase-like beta-barrel|Siderophore-interacting protein GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF04954|PF08021|SSF63380 ALFP_RS10860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005149|IPR011991 Transcription regulator PadR, N-terminal|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF03551|SSF46785 ALFP_RS10870 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003953|IPR006905|IPR023753 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Tryptophan halogenase GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF00890|PF04820|PR00420|SSF51905 ALFP_RS10875 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000045|IPR014032 Peptidase A24A, prepilin type IV, bacterial|Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PF01478|PR00864 ALFP_RS10880 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011935 Conserved hypothetical protein CHP02231 PF13598 ALFP_RS10885 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991|IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type|LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850|TIGR03339 ALFP_RS10890 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR008995|IPR017666|IPR017871|IPR027417 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2|AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF50331|SSF52540|TIGR03265 ALFP_RS10895 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative|ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR03262 ALFP_RS10900 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006323|IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2|Phosphonoacetaldehyde hydrolase GO:0008152|GO:0016787|GO:0019700|GO:0050194 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|MF_01375|PF13419|SSF56784|TIGR01422|TIGR01509 ALFP_RS10905 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017663|IPR026045 ABC transport system, 1-aminoethylphosphonate-binding protein, putative|Ferric binding protein G3DSA:3.40.190.10|PF13343|PIRSF002825|SSF53850|TIGR03261 ALFP_RS10910 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006076|IPR017741|IPR023753 FAD dependent oxidoreductase|FAD-dependent oxidoreductase, HpnW|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|SSF51905|TIGR03364 ALFP_RS10915 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13420|SSF55729 ALFP_RS10925 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002925|IPR029058 Alpha/Beta hydrolase fold|Dienelactone hydrolase GO:0016787 G3DSA:3.40.50.1820|PF01738|SSF53474 ALFP_RS10930 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR024530 Putative quorum-sensing-regulated virulence factor PD056452|PF12843 ALFP_RS10935 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF02798|PF14497|SSF47616|SSF52833 ALFP_RS10940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003829|IPR008778|IPR011051|IPR012093|IPR014710 Pirin|Pirin, C-terminal domain|Pirin, N-terminal domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF02678|PF05726|PIRSF006232|SSF51182 ALFP_RS10945 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like G3DSA:2.60.120.590|PF13532|SSF51197 ALFP_RS10950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001110|IPR003010 Carbon-nitrogen hydrolase|Uncharacterised protein family UPF0012, conserved site GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PS01227|SSF56317 ALFP_RS10955 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS10960 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS10965 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR011051|IPR014710|IPR018060 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF02311|PF12833|SM00342|SSF46689|SSF51182 ALFP_RS10970 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 PF03594|TIGR00843 ALFP_RS10975 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021553 Protein of unknwon function DUF3008 PF11450 ALFP_RS10980 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005501|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|Uncharacterised protein family UPF0271, LamB/YcsF GO:0003824|GO:0005975 MF_00691|PF03746|SSF88713 ALFP_RS10985 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS10990 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR002346|IPR002888|IPR005107|IPR006058|IPR012175|IPR012675|IPR014307|IPR016166|IPR016167|IPR016169 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding|Xanthine dehydrogenase, small subunit|Xanthine dehydrogenase, small subunit, bacteria|[2Fe-2S]-binding GO:0003824|GO:0004854|GO:0004855|GO:0009055|GO:0016491|GO:0016614|GO:0046872|GO:0050660|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00111|PF00941|PF01799|PF03450|PIRSF036557|PS00197|SM01092|SSF47741|SSF54292|SSF55447|SSF56176|TIGR02963 ALFP_RS10995 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000674|IPR008274|IPR014309 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Xanthine dehydrogenase, molybdopterin binding subunit GO:0016491|GO:0030151|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|SM01008|SSF54665|SSF56003|TIGR02965 ALFP_RS11000 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003777|IPR014308|IPR027051 Xanthine dehydrogenase accessory protein XdhC|XdhC Rossmann domain|XdhC- CoxI PF02625|PF13478|TIGR02964 ALFP_RS11005 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006680|IPR011059|IPR014311|IPR032466 Amidohydrolase-related|Guanine deaminase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0006147|GO:0008270|GO:0008892|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556|TIGR02967 ALFP_RS11010 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007318 Phospholipid methyltransferase PF04191 ALFP_RS11015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 ALFP_RS11020 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003594|IPR003660|IPR003661 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0004871|GO:0007165|GO:0016021 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00672|PF02518|SM00387|SSF47384|SSF55874 ALFP_RS11025 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000943|IPR007127|IPR007624|IPR007627|IPR007630|IPR007631|IPR009042|IPR011991|IPR012760|IPR013324|IPR013325|IPR014284|IPR028630 RNA polymerase sigma factor 70, non-essential domain|RNA polymerase sigma factor 70, region 1.1|RNA polymerase sigma factor RpoD|RNA polymerase sigma factor RpoD, C-terminal|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00963|PF00140|PF03979|PF04539|PF04542|PF04545|PF04546|PR00046|PS00715|PS00716|SSF88659|SSF88946|TIGR02393|TIGR02937 ALFP_RS11030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002694|IPR006171|IPR006295|IPR013173|IPR013264|IPR016136|IPR019475|IPR030846 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA primase DnaG, DnaB-binding domain|DNA primase DnaG, bacteria|DNA primase, DnaB-helicase binding domain|DNA primase, DnaG|DNA primase, catalytic core, N-terminal|Toprim domain|Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0006269|GO:0008270|GO:0016779 G3DSA:1.10.860.10|G3DSA:1.20.50.20|G3DSA:3.40.1360.10|G3DSA:3.90.580.10|G3DSA:3.90.980.10|MF_00974|PF01807|PF08275|PF08278|PF10410|PF13662|PIRSF002811|SM00400|SM00493|SM00766|SSF117023|SSF56731|SSF57783|TIGR01391 ALFP_RS11035 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001911|IPR018278 Ribosomal protein S21|Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00358|PD005521|PF01165|PR00976|PS01181|TIGR00030 ALFP_RS11040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|SSF53271 ALFP_RS11045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001114|IPR018220|IPR027417|IPR033128 Adenylosuccinate synthase, active site|Adenylosuccinate synthase, GTP-binding site|Adenylosuccinate synthetase|P-loop containing nucleoside triphosphate hydrolase GO:0004019|GO:0005525|GO:0006164 G3DSA:1.10.300.10|G3DSA:3.40.440.10|G3DSA:3.90.170.10|MF_00011|PF00709|PS00513|PS01266|SM00788|SSF52540|TIGR00184 ALFP_RS11050 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004516|IPR004517 ATP phosphoribosyltransferase regulatory subunit|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 G3DSA:3.30.930.10|MF_00125|PF13393|PIRSF001549|SSF55681 ALFP_RS11055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001107|IPR010200 Band 7 domain|HflC GO:0016021|GO:0052547 PF01145|PIRSF005651|SM00244|SSF117892|TIGR01932 ALFP_RS11060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001107|IPR010201|IPR020980 Band 7 domain|HflK|Menbrane protein HflK, N-terminal GO:0016021 PF01145|PF12221|SM00244|SSF117892|TIGR01933 ALFP_RS11065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006073|IPR016496|IPR025121|IPR027417|IPR032305 GTP binding domain|GTP-binding protein, middle domain|GTPase HflX|GTPase HflX, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|MF_00900|PF01926|PF13167|PF16360|PIRSF006809|PR00326|SSF52540|TIGR03156 ALFP_RS11070 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005001|IPR010920 LSM domain|RNA-binding protein Hfq GO:0003723|GO:0006355 G3DSA:2.30.30.100|MF_00436|SSF50182|TIGR02383 ALFP_RS11075 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001917|IPR004839|IPR005861|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Histidinol-phosphate aminotransferase family|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0000105|GO:0003824|GO:0004400|GO:0008152|GO:0009058|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01023|PF00155|PS00599|SSF53383|TIGR01141 ALFP_RS11080 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005225|IPR006073|IPR015946|IPR016484|IPR027417|IPR032859 GTP binding domain|GTP-binding protein EngA|GTPase Der, C-terminal KH-domain-like|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0005525 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00195|PF01926|PF14714|PIRSF006485|PR00326|SSF52540|TIGR00231|TIGR03594 ALFP_RS11085 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002372|IPR011047|IPR017687|IPR018391|IPR027295 Outer membrane protein assembly factor BamB|Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily G3DSA:2.140.10.10|MF_00923|PF13360|SM00564|SSF50998|TIGR03300 ALFP_RS11090 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011990|IPR018704|IPR026039 Tetratricopeptide repeat-like domain|Tetratricopeptide-like helical domain|Uncharacterised protein family UPF0070 GO:0005515 G3DSA:1.25.40.10|PF09976|PIRSF006170|SSF48452 ALFP_RS11095 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004154|IPR004516|IPR015807 Anticodon-binding|Histidine-tRNA ligase|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0004821|GO:0005524|GO:0005737|GO:0006427 G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_00127|PF03129|PF13393|PIRSF001549|SSF52954|SSF55681|TIGR00442 ALFP_RS11100 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004588|IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial|4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0005506|GO:0008299|GO:0016114|GO:0046429|GO:0055114 MF_00159|PF04551|PIRSF004640|SSF56014|TIGR00612 ALFP_RS11105 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40|PF13413 ALFP_RS11110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004383|IPR007197|IPR013785|IPR027492 Aldolase-type TIM barrel|Dual-specificity RNA methyltransferase RlmN|Radical SAM|Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0003824|GO:0005737|GO:0006364|GO:0008173|GO:0030488|GO:0051536|GO:0070475 G3DSA:3.20.20.70|MF_01849|PF04055|PIRSF006004|SSF102114|TIGR00048 ALFP_RS11115 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001564|IPR023005 Nucleoside diphosphate kinase|Nucleoside diphosphate kinase, active site GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 G3DSA:3.30.70.141|MF_00451|PF00334|PR01243|PS00469|SM00562|SSF54919 ALFP_RS11120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001412|IPR002300|IPR002303|IPR009008|IPR009080|IPR010978|IPR013155|IPR014729|IPR019499 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valine-tRNA ligase|Valyl-tRNA synthetase, tRNA-binding arm|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|tRNA-binding arm GO:0000166|GO:0002161|GO:0004812|GO:0004832|GO:0005524|GO:0005737|GO:0006418|GO:0006438 G3DSA:1.10.287.380|G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02004|PF00133|PF08264|PF10458|PR00986|PS00178|SSF46589|SSF47323|SSF50677|SSF52374|TIGR00422 ALFP_RS11125 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002649|IPR016009|IPR023148|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, C-terminal|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA (guanine-N1-)-methyltransferase, bacteria|tRNA methyltransferase TRMD/TRM10-type domain GO:0008033|GO:0052906 G3DSA:1.10.1270.20|G3DSA:3.40.1280.10|MF_00605|PF01746|PIRSF000386|SSF75217|TIGR00088 ALFP_RS11130 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002676|IPR009000|IPR011033|IPR011961 16S rRNA processing protein RimM|PRC-barrel-like|RimM protein|Translation protein, beta-barrel domain GO:0005840|GO:0006364|GO:0043022 G3DSA:2.30.30.240|G3DSA:2.40.30.60|MF_00014|PF01782|SSF50346|SSF50447|TIGR02273 ALFP_RS11135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000307|IPR023803 Ribosomal protein S16|Ribosomal protein S16 domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1320.10|MF_00385|PF00886|SSF54565|TIGR00002 ALFP_RS11140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001455 TusA-like domain G3DSA:3.30.110.40|PF01206|PS01148|SSF64307 ALFP_RS11145 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002318|IPR003156|IPR009000|IPR012947|IPR018162|IPR018163|IPR018164|IPR023033 Alanine-tRNA ligase, class IIc|Alanine-tRNA ligase, class IIc, anti-codon-binding domain|Alanine-tRNA ligase, eukaryota/bacteria|Alanyl-tRNA synthetase, class IIc, N-terminal|DHHA1 domain|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain|Translation protein, beta-barrel domain GO:0000166|GO:0003676|GO:0004813|GO:0005524|GO:0005737|GO:0006419|GO:0016876|GO:0043039 G3DSA:3.30.930.10|MF_00036_B|PF01411|PF02272|PF07973|PR00980|SM00863|SSF101353|SSF50447|SSF55186|SSF55681|TIGR00344 ALFP_RS11150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002509|IPR011330|IPR017625 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain|Putative urate catabolism protein GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713|TIGR03212 ALFP_RS11155 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 ALFP_RS11160 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR014306|IPR023416|IPR023418 Hydroxyisourate hydrolase|Transthyretin, thyroxine binding site|Transthyretin/hydroxyisourate hydrolase, superfamily GO:0006144|GO:0033971 G3DSA:2.60.40.180|PF00576|PS00768|SSF49472|TIGR02962 ALFP_RS11165 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009056|IPR010389 Cytochrome c-like domain|Domain of unknown function DUF989 GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|PF06181|SSF46626 ALFP_RS11185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010258|IPR018927 Conjugal transfer, TrbG/VirB9/CagX|Toxin co-regulated pilus biosynthesis protein Q, C-terminal PF03524|PF10671 ALFP_RS11190 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic G3DSA:3.40.190.10|PF13416|SSF53850 ALFP_RS11195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|SSF51905|SSF54373 ALFP_RS11200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR001221|IPR001433|IPR001709|IPR006058|IPR008333|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00371|PR00410|PS00197|SSF52343|SSF54292|SSF63380 ALFP_RS11205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002205|IPR005742|IPR006691|IPR013758|IPR013760|IPR024946 Arginine repressor C-terminal-like domain|DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel|DNA topoisomerase IV, subunit A, Gram-negative|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_00936|PF00521|PF03989|SM00434|SSF101904|SSF56719|TIGR01062 ALFP_RS11210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001241|IPR002288|IPR003594|IPR005737|IPR006171|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA topoisomerase IV, subunit B, Gram-negative|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_00938|PF00204|PF00986|PF01751|PF02518|PR00418|PR01098|PS00177|SM00387|SM00433|SSF54211|SSF55874|SSF56719 ALFP_RS11215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PIRSF000077|PR00421|PS00194|SSF52833|TIGR01068 ALFP_RS11220 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000194|IPR003593|IPR004665|IPR011112|IPR011113|IPR011129|IPR012340|IPR027417 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|Cold shock protein|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Rho termination factor, N-terminal|Rho termination factor, RNA-binding|Transcription termination factor Rho GO:0003676|GO:0003723|GO:0005524|GO:0006353|GO:0008186 G3DSA:1.10.720.10|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01884|PF00006|PF07497|PF07498|SM00357|SM00382|SM00959|SSF50249|SSF52540|SSF68912|TIGR00767 ALFP_RS11225 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006095|IPR006096|IPR006097|IPR014362|IPR016040|IPR033524 Glutamate dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal|Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain|Leu/Phe/Val dehydrogenases active site|NAD(P)-binding domain GO:0006520|GO:0016491|GO:0016639|GO:0055114 G3DSA:1.10.285.10|G3DSA:3.40.192.10|G3DSA:3.40.50.720|PF00208|PF02812|PIRSF000185|PR00082|PS00074|SM00839|SSF51735|SSF53223 ALFP_RS11230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|SM00903|SSF50475 ALFP_RS11235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000391|IPR032710 NTF2-like domain|Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 G3DSA:3.10.450.50|PF00866|SSF54427 ALFP_RS11240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001663|IPR015879|IPR017941 Aromatic-ring-hydroxylating dioxygenase, alpha subunit|Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0006725|GO:0016491|GO:0016708|GO:0019439|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|PR00090|SSF50022|SSF55961 ALFP_RS11245 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 ALFP_RS11250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 ALFP_RS11255 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS11260 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|PF00496|PIRSF002741|SSF53850 ALFP_RS11265 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004096|IPR024096 4-vinyl reductase, 4VR|NO signalling/Golgi transport ligand-binding domain G3DSA:3.30.1380.20|PF02830|SM00989|SSF111126 ALFP_RS11270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 ALFP_RS11275 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000871|IPR012338 Beta-lactamase, class-A|Beta-lactamase/transpeptidase-like GO:0008800|GO:0030655|GO:0046677 G3DSA:3.40.710.10|PF13354|PR00118|SSF56601 ALFP_RS11280 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007844|IPR025263|IPR032712 AsmA|AsmA-like, C-terminal|Domain of unknown function DUF3971 PF05170|PF13116|PF13502 ALFP_RS11285 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005190|IPR013546|IPR023057 Glutamate-ammonia ligase adenylyltransferase, repeated domain|Glutamate-ammonia-ligase adenylyltransferase|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0008882|GO:0016779 G3DSA:3.30.460.10|MF_00802|PF03710|PF08335|SSF81301|SSF81593 ALFP_RS11290 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003828 Protein of unknown function DUF208 PF02677 ALFP_RS11295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017730|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Chaperonin ClpB|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009408|GO:0016485|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|SM00382|SM01086|SSF52540|SSF81923|TIGR03346 ALFP_RS11300 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018335|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Transcription regulator HTH, Crp-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|PS00042|SM00100|SM00419|SSF46785|SSF51206 ALFP_RS11310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008620 Nitrogen fixation protein FixH PF05751 ALFP_RS11315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013783|IPR014116|IPR017896|IPR017900|IPR032879 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Cytochrome c oxidase cbb3 type, accessory protein FixG|FixG, C-terminal immunoglobulin-like domain|Immunoglobulin-like fold GO:0016021 G3DSA:2.60.40.10|G3DSA:3.30.70.20|PF11614|PF12801|PF13746|PS00198|SSF54862|TIGR02745 ALFP_RS11320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004678|IPR009056|IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal|Cytochrome c oxidase cbb3-type, subunit III|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PF14715|PIRSF000006|SSF46626|TIGR00782 ALFP_RS11325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008621 Cbb3-type cytochrome oxidase component PF05545 ALFP_RS11330 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003468|IPR009056 Cytochrome c oxidase, monohaem subunit/FixO|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF02433|SSF46626|TIGR00781 ALFP_RS11335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000883|IPR004677|IPR023615|IPR023616 Cytochrome c oxidase cbb3-type, subunit I|Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain|Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0045278|GO:0055114 G3DSA:1.20.210.10|PF00115|PS00077|SSF81442|TIGR00780 ALFP_RS11340 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004714 Cytochrome oxidase maturation protein cbb3-type PF03597|TIGR00847 ALFP_RS11350 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006254|IPR015813|IPR018523 Isocitrate lyase|Isocitrate lyase/phosphorylmutase, conserved site|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0004451|GO:0008152|GO:0019752 G3DSA:3.20.20.60|PF00463|PIRSF001362|PS00161|SSF51621|TIGR01346 ALFP_RS11355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016428|IPR029139|IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF|NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal|NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0033739|GO:0046857|GO:0055114 G3DSA:3.30.1130.10|MF_00817|PF14489|PF14819|PIRSF004750|SSF55620|TIGR03138 ALFP_RS11360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS11365 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000462|IPR004570 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016020|GO:0016021|GO:0016780 PF01066|PIRSF000847|PS00379|TIGR00560 ALFP_RS11370 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000305|IPR001162|IPR001943|IPR003583|IPR004791|IPR010994|IPR027299 GIY-YIG domain|GIY-YIG nuclease superfamily|Helix-hairpin-helix DNA-binding motif, class 1|RuvA domain 2-like|UVR domain|UvrABC system, subunit C|UvrC family homology region GO:0003677|GO:0005515|GO:0005737|GO:0006281|GO:0009380|GO:0009381 G3DSA:1.10.150.20|G3DSA:3.40.1440.10|G3DSA:4.10.860.10|MF_00203|PF01541|PF02151|PF08459|PF14520|SM00278|SM00465|SSF46600|SSF47781|SSF82771|TIGR00194 ALFP_RS11375 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001764|IPR017853|IPR022956 Beta-hexosaminidase, bacterial|Glycoside hydrolase superfamily|Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0004563|GO:0005975 G3DSA:3.20.20.300|MF_00364|PF00933|SSF51445 ALFP_RS11380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002582|IPR004568|IPR008278 4'-phosphopantetheinyl transferase superfamily|Holo-[acyl carrier protein] synthase|Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 G3DSA:3.90.470.20|MF_00101|PD004282|PF01648|SSF56214|TIGR00516|TIGR00556 ALFP_RS11385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000873|IPR011880|IPR028154 AMP-dependent ligase, C-terminal|AMP-dependent synthetase/ligase|Phenylacetate-CoA ligase GO:0003824|GO:0008152|GO:0010124|GO:0047475 G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF14535|PIRSF006444|SSF56801|TIGR02155 ALFP_RS11390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003736|IPR006683|IPR011973|IPR029069 HotDog domain|Phenylacetic acid degradation protein PaaD|Phenylacetic acid degradation-related domain|Thioesterase domain GO:0016790 G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369|TIGR02286 ALFP_RS11395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001753|IPR011968|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0003824|GO:0008152|GO:0010124 G3DSA:3.90.226.10|PF00378|SSF52096|TIGR02280 ALFP_RS11400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011975|IPR015590|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase|Phenylacetic acid degradation protein PaaN2 GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|SSF53720|TIGR02288 ALFP_RS11405 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR001433|IPR001834|IPR006058|IPR008333|IPR011884|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|NADH:cytochrome b5 reductase (CBR)|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenylacetate-CoA oxygenase/reductase, PaaK subunit|Riboflavin synthase-like beta-barrel GO:0009055|GO:0010124|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00406|PS00197|SSF52343|SSF54292|SSF63380|TIGR02160 ALFP_RS11410 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002744|IPR011883 Domain of unknown function DUF59|Phenylacetate-CoA oxygenase, PaaJ subunit PF01883|SSF117916|TIGR02159 ALFP_RS11415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007814|IPR009078|IPR011882|IPR012347 1,2-phenylacetyl-CoA epoxidase, subunit A/C|1,2-phenylacetyl-CoA epoxidase, subunit C|Ferritin-like superfamily|Ferritin-related GO:0010124 G3DSA:1.20.1260.10|PF05138|PIRSF037834|SSF47240|TIGR02158 ALFP_RS11420 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009359 Phenylacetic acid degradation B PF06243|PIRSF030200|TIGR02157 ALFP_RS11425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007814|IPR009078|IPR011881|IPR012347 1,2-phenylacetyl-CoA epoxidase, subunit A|1,2-phenylacetyl-CoA epoxidase, subunit A/C|Ferritin-like superfamily|Ferritin-related GO:0010124|GO:0097266 G3DSA:1.20.1260.10|PF05138|SSF47240|TIGR02156 ALFP_RS11430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012337|IPR013520|IPR022894 Exonuclease, RNase T/DNA polymerase III|Oligoribonuclease|Ribonuclease H-like domain GO:0003676|GO:0016788 G3DSA:3.30.420.10|MF_00045|PF00929|SM00479|SSF53098 ALFP_RS11435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001915|IPR032456 CAAX prenyl protease 1, N-terminal|Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435|PF16491 ALFP_RS11440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004881|IPR010914|IPR012340|IPR027417 Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Ribosome biogenesis GTPase RsgA, putative|RsgA type GTPase domain GO:0003924|GO:0005525 G3DSA:1.10.40.50|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01820|PF03193|SSF50249|SSF52540|TIGR00157 ALFP_RS11445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|SSF55811 ALFP_RS11450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001857|IPR008991|IPR018257 Ribosomal protein L19|Ribosomal protein L19, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00402|PF01245|PIRSF002191|PR00061|PS01015|SSF50104|TIGR01024 ALFP_RS11455 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR019491 Lipoate protein ligase, C-terminal G3DSA:3.30.390.50|PF10437|SSF82649 ALFP_RS11460 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 G3DSA:3.90.1550.10|PF03099|SSF55681 ALFP_RS11470 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000866|IPR012336|IPR019479|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Peroxiredoxin, C-terminal|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0051920|GO:0055114 G3DSA:3.30.1020.10|G3DSA:3.40.30.10|PF00578|PF10417|PIRSF000239|SSF52833 ALFP_RS11475 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006091|IPR009075|IPR009100|IPR013786|IPR020953|IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain|Acyl-CoA dehydrogenase, N-terminal, bacteria|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PF12418|PF12806|SSF47203|SSF56645 ALFP_RS11480 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001308|IPR014729|IPR014730|IPR014731|IPR018206|IPR029035 DHS-like NAD/FAD-binding domain|Electron transfer flavoprotein alpha subunit/FixB|Electron transfer flavoprotein subunit alpha, conserved site|Electron transfer flavoprotein, alpha subunit, C-terminal|Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.620|PF00766|PF01012|PIRSF000089|PS00696|SM00893|SSF52402|SSF52467 ALFP_RS11485 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000049|IPR012255|IPR014729|IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Electron transfer flavoprotein, beta subunit|Electron transfer flavoprotein, beta-subunit, conserved site|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055 G3DSA:3.40.50.620|PF01012|PIRSF000090|PS01065|SM00893|SSF52402 ALFP_RS11490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000286|IPR023801 Histone deacetylase domain|Histone deacetylase superfamily G3DSA:3.40.800.20|PF00850|PR01270|SSF52768 ALFP_RS11495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011757|IPR023346|IPR031304 Lysozyme-like domain|Lytic transglycosylase MltB|Transglycosylase SLT domain 2 G3DSA:1.10.530.10|PF13406|SSF53955|TIGR02282 ALFP_RS11500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001216|IPR001926|IPR005856|IPR005858 Cysteine synthase|Cysteine synthase CysM|Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004124|GO:0006535 G3DSA:3.40.50.1100|PF00291|PS00901|SSF53686|TIGR01136|TIGR01138 ALFP_RS11505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003583|IPR010994 Helix-hairpin-helix DNA-binding motif, class 1|RuvA domain 2-like GO:0003677|GO:0006281 G3DSA:1.10.150.280|PF12836|SM00278|SSF47781 ALFP_RS11510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001509|IPR011912|IPR016040 ADP-L-glycero-D-manno-heptose-6-epimerase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0005975|GO:0008712|GO:0050661|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_01601|PF01370|SSF51735|TIGR02197 ALFP_RS11515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002173|IPR011611|IPR011913|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|RfaE bifunctional protein, domain I|Ribokinase-like GO:0005975|GO:0016773|GO:0016779 G3DSA:3.40.1190.20|PF00294|PS00583|SSF53613|TIGR02198 ALFP_RS11520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011990|IPR030865 Lipopolysaccharide assembly protein B|Tetratricopeptide-like helical domain GO:0005515|GO:0008653 G3DSA:1.25.40.10|MF_00994|SSF48452 ALFP_RS11525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 PF06305 ALFP_RS11530 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000119|IPR005685|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain|Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 G3DSA:4.10.520.10|PF00216|PR01727|SM00411|SSF47729|TIGR00988 ALFP_RS11535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000110|IPR003029|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribosomal protein S1|S1 domain GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412 G3DSA:2.40.50.140|PF00575|PR00681|SM00316|SSF50249|TIGR00717 ALFP_RS11540 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003136|IPR011994|IPR027417 Cytidylate kinase|Cytidylate kinase domain|P-loop containing nucleoside triphosphate hydrolase GO:0004127|GO:0005524|GO:0006139 G3DSA:3.40.50.300|MF_00238|PF02224|SSF52540|TIGR00017 ALFP_RS11545 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001986|IPR006264|IPR013792|IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase|3-phosphoshikimate 1-carboxyvinyltransferase, conserved site|Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824|GO:0003866|GO:0016765 G3DSA:3.65.10.10|MF_00210|PF00275|PIRSF000505|PS00104|PS00885|SSF55205|TIGR01356 ALFP_RS11550 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003099|IPR008927|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 G3DSA:3.40.50.720|PF02153|SSF48179|SSF51735 ALFP_RS11555 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001086|IPR002701|IPR002912|IPR008242|IPR010957|IPR018528|IPR020822 ACT domain|Bifunctional P-protein, chorismate mutase/prephenate dehydratase|Chorismate mutase|Chorismate mutase, type II|Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain|Prephenate dehydratase|Prephenate dehydratase, conserved site GO:0004106|GO:0004664|GO:0005737|GO:0008152|GO:0009094|GO:0016597|GO:0046417 G3DSA:1.20.59.10|G3DSA:3.30.70.260|G3DSA:3.40.190.10|PF00800|PF01817|PF01842|PIRSF001500|PS00858|SM00830|SSF48600|SSF53850|SSF55021|TIGR01807 ALFP_RS11560 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR022278 Aminotransferase class V domain|Phosphoserine aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004648|GO:0006564 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00160|PF00266|PIRSF000525|SSF53383|TIGR01364 ALFP_RS11565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002205|IPR005743|IPR006691|IPR013757|IPR013758|IPR013760|IPR024946 Arginine repressor C-terminal-like domain|DNA gyrase, subunit A|DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain|Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:1.10.268.10|G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_01897|PF00521|PF03989|SM00434|SSF101904|SSF56719|TIGR01063 ALFP_RS11570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006664|IPR006665 OmpA-like domain|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PR01023|SSF103088 ALFP_RS11575 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010233|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 G3DSA:3.40.50.150|MF_00472|PF13489|SSF53335|TIGR01983 ALFP_RS11580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006346|IPR006439|IPR023198|IPR023214 2-phosphoglycolate phosphatase, prokaryotic|HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0008967|GO:0016787|GO:0046295 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01449|TIGR01509|TIGR01549 ALFP_RS11585 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS11590 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01036|SSF103473 ALFP_RS11595 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000813|IPR017896|IPR017900|IPR022569 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|7Fe ferredoxin|Ferredoxin, C-terminal GO:0009055 G3DSA:3.30.70.20|PF00037|PF11953|PR00354|PS00198|SSF54862 ALFP_RS11600 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003199|IPR029055|IPR029132 Choloylglycine hydrolase/NAAA C-terminal|Choloylglycine hydrolase/Peptidase C59 family|Nucleophile aminohydrolases, N-terminal GO:0016811 G3DSA:3.60.60.10|PF02275|SSF56235 ALFP_RS11605 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 ALFP_RS11615 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SSF56925 ALFP_RS11620 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002226|IPR010582|IPR011614|IPR018028|IPR020835|IPR024708|IPR024712|IPR029062 Catalase active site|Catalase core domain|Catalase haem-binding site|Catalase immune-responsive domain|Catalase, mono-functional, haem-containing|Catalase, mono-functional, haem-containing, clade 2|Catalase-like domain|Class I glutamine amidotransferase-like GO:0004096|GO:0006979|GO:0020037|GO:0055114 G3DSA:2.40.180.10|G3DSA:3.40.50.880|PF00199|PF06628|PIRSF038927|PR00067|PS00437|PS00438|SM01060|SSF52317|SSF56634 ALFP_RS11625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 ALFP_RS11630 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold GO:0005488 G3DSA:1.25.10.10|PF13646|SSF48371 ALFP_RS11635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|SM00347|SSF46785 ALFP_RS11640 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383 ALFP_RS11645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS11650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 ALFP_RS11655 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 ALFP_RS11660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|SSF54637 ALFP_RS11665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 ALFP_RS11670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 ALFP_RS11675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810 ALFP_RS11680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991|IPR017685 HTH-type transcriptional regulator ArgP|LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850|TIGR03298 ALFP_RS11685 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|PF00155|PF00392|PR00035|SM00345|SSF46785|SSF53383 ALFP_RS11690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007396|IPR012349 FMN-binding split barrel|Transcriptional regulator PAI 2-type GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF04299|PIRSF010372|SSF50475 ALFP_RS11695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000944|IPR011991 Transcription regulator Rrf2-type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|SSF46785 ALFP_RS11700 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|SSF53335 ALFP_RS11705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000103|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|SSF51905 ALFP_RS11710 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF02798|PF14497|SSF47616|SSF52833 ALFP_RS11715 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic G3DSA:2.10.260.10|SSF89447 ALFP_RS11720 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025382 Domain of unknown function DUF4297 PF14130 ALFP_RS11725 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 ALFP_RS11730 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029787 Nucleotide cyclase SSF55073 ALFP_RS11735 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003812|IPR025159 Fido domain|Transcriptional regulator, AbiEi antitoxin G3DSA:1.10.3290.10|PF02661|PF13338|SSF140931 ALFP_RS11740 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001650|IPR006935|IPR007409|IPR013670|IPR014001|IPR025285|IPR027417 Domain of unknown function DUF4145|EcoEI R protein C-terminal domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0003824|GO:0004519|GO:0005524|GO:0006304|GO:0016787 G3DSA:3.40.50.300|PF00271|PF04313|PF04851|PF08463|PF13643|SM00487|SSF52540 ALFP_RS11745 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004919 Domain of unknown function DUF262 PF03235 ALFP_RS11750 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|SSF116734 ALFP_RS11755 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002052|IPR003356|IPR022749|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N-terminal domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF02384|PF12161|PR00507|PS00092|SSF53335 ALFP_RS11765 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001584|IPR009004|IPR012337|IPR014833|IPR015378 Integrase, catalytic core|Ribonuclease H-like domain|TnsA endonuclease, N-terminal|Transposase, Mu, C-terminal|Transposase-like, Mu, C-terminal GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PF08722|PF09299|SSF50610|SSF53098 ALFP_RS11770 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003593|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13401|SM00382|SSF52540 ALFP_RS11775 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009492 TniQ PF06527 ALFP_RS11785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001991|IPR023025 Serine/threonine transporter SstT|Sodium:dicarboxylate symporter GO:0015293|GO:0015826|GO:0016021|GO:0032329 G3DSA:1.10.3860.10|MF_01582|PF00375|PR00173|SSF118215 ALFP_RS11790 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PIRSF006324 ALFP_RS11795 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 G3DSA:3.40.50.1810|PF05014|SSF52309 ALFP_RS11800 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000281|IPR001347|IPR009057|IPR011991 Helix-turn-helix protein RpiR|Homeodomain-like|Sugar isomerase (SIS)|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005975|GO:0006355|GO:0030246 G3DSA:1.10.10.10|G3DSA:3.40.50.10490|PF01380|PF01418|SSF46689|SSF53697 ALFP_RS11805 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007436 Protein of unknown function DUF485 PF04341 ALFP_RS11810 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001734|IPR018212 Sodium/solute symporter|Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474|PS00456|TIGR00813 ALFP_RS11815 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 ALFP_RS11820 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF12860|PR00344|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874 ALFP_RS11830 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR014729|IPR015947|IPR024951|IPR025980 ATP-sulfurylase PUA-like domain|PUA-like domain|Rossmann-like alpha/beta/alpha sandwich fold|Sulphate adenylyltransferase catalytic domain GO:0004781 G3DSA:3.10.400.10|G3DSA:3.40.50.620|PF01747|PF14306|SSF52374|SSF88697 ALFP_RS11835 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001045|IPR003826|IPR016067|IPR029063|IPR030373 Polyamine biosynthesis domain, conserved site|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosylmethionine decarboxylase family, prokaryotic|S-adenosylmethionine decarboxylase, core|Spermidine/spermine synthases GO:0003824|GO:0004014|GO:0008295 G3DSA:2.30.140.10|G3DSA:3.40.50.150|G3DSA:3.60.90.10|MF_00198|PF01564|PF02675|PS01330|SSF53335|SSF56276 ALFP_RS11840 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000014|IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF13188|PR00344|SM00387|SM00388|SSF47384|SSF55785|SSF55874 ALFP_RS11845 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR009061|IPR010093|IPR011006 CheY-like superfamily|Putative DNA-binding domain|Signal transduction response regulator, receiver domain|SinI-like, DNA-binding domain GO:0000160|GO:0003677 G3DSA:1.10.1660.10|G3DSA:3.40.50.2300|PF00072|PF12728|SM00448|SSF46955|SSF52172|TIGR01764 ALFP_RS11850 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000014|IPR004089|IPR004090|IPR013655 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain|PAS domain|PAS fold-3 GO:0004871|GO:0005515|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF08447|PR00260|SM00283|SSF55785|SSF58104|TIGR00229 ALFP_RS11855 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001727 Gdt1 family GO:0032472 PF01169 ALFP_RS11860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic PF13231 ALFP_RS11865 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS11870 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003680|IPR023048|IPR029039 Flavodoxin-like fold|Flavoprotein-like domain|NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 G3DSA:3.40.50.360|MF_01216|PF02525|SSF52218 ALFP_RS11875 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000926|IPR032677 GTP cyclohydrolase II|GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 MF_00179|PF00925|SSF142695|TIGR00505 ALFP_RS11885 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016021|GO:0022904 PF01292|SSF81342 ALFP_RS11890 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004147|IPR011009 Protein kinase-like domain|UbiB domain G3DSA:3.90.1200.10|PF03109|SSF56112 ALFP_RS11895 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007343 Uncharacterised protein family, zinc metallopeptidase putative PF04228 ALFP_RS11905 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS11910 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 G3DSA:3.60.130.10|PF02668|SSF51197 ALFP_RS11915 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|SM00347|SSF46785 ALFP_RS11925 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002187|IPR002332|IPR011322|IPR015867|IPR017918 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PIRSF039144|PR00340|PS00496|PS00638|SM00938|SSF54913 ALFP_RS11930 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001905|IPR002229|IPR018047|IPR024041|IPR029020 Ammonium transporter|Ammonium transporter AmtB-like domain|Ammonium transporter, conserved site|Ammonium/urea transporter|Blood group Rhesus C/E/D polypeptide GO:0008519|GO:0015696|GO:0016020|GO:0072488 G3DSA:1.10.3430.10|PF00909|PR00342|PS01219|SSF111352|TIGR00836 ALFP_RS11935 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002321|IPR010980|IPR012127|IPR015984 Cytochrome c prime|Cytochrome c prime, subgroup|Cytochrome c, class II|Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 G3DSA:1.20.120.10|PF01322|PIRSF000027|PR00608|SSF47175 ALFP_RS11940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000362|IPR004769|IPR008948|IPR013539|IPR020557|IPR022761|IPR024083 Adenylosuccinate lyase|Adenylosuccinate lyase PurB, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004018|GO:0006188|GO:0009152 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF08328|PR00149|PS00163|SSF48557|TIGR00928 ALFP_RS11945 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13410|PF13417|SSF47616|SSF52833 ALFP_RS11950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|SM00342|SSF46689 ALFP_RS11955 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013094|IPR029058|IPR033140 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3|Lipase, GDXG, putative serine active site GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|PS01174|SSF53474 ALFP_RS11960 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 ALFP_RS11965 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004506|IPR014729|IPR023382 Adenine nucleotide alpha hydrolase-like domains|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-specific 2-thiouridylase GO:0008033|GO:0016740|GO:0016783 G3DSA:2.30.30.280|G3DSA:2.40.30.10|G3DSA:3.40.50.620|MF_00144|PF03054|SSF52402|TIGR00420 ALFP_RS11970 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|SSF55103|SSF56176 ALFP_RS11975 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006218|IPR006219|IPR013785 Aldolase-type TIM barrel|DAHP synthetase I/KDSA|DHAP synthase, class 1 GO:0003824|GO:0003849|GO:0009058|GO:0009073 G3DSA:3.20.20.70|PF00793|PIRSF001361|SSF51569|TIGR00034 ALFP_RS11980 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007423 Protein of unknown function DUF466 PF04328 ALFP_RS11985 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003706|IPR025299 CstA, C-terminal domain|CstA, N-terminal domain GO:0009267|GO:0016020 PF02554|PF13722 ALFP_RS11990 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001638|IPR014337 Ectoine/Hydroxyectoine-binding protein EhuB|Solute-binding protein family 3/N-terminal domain of MltF GO:0005886|GO:0033294|GO:0051470|GO:0051471 G3DSA:3.40.190.10|PF00497|SM00062|SSF53850|TIGR02995 ALFP_RS11995 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR010065|IPR014342 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|Ectoine/hydroxyectoine ABC transporter, permease protein EhuC GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726|TIGR03004 ALFP_RS12000 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR010065|IPR014341 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|Ectoine/hydroxyectoine ABC transporter, permease protein EhuD GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726|TIGR03003 ALFP_RS12005 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR014343|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|Ectoine/hydroxyectoine ABC transporter, ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540|TIGR03005 ALFP_RS12010 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|SSF52467|SSF52518 ALFP_RS12015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|SSF53720 ALFP_RS12020 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002811|IPR005106|IPR011182|IPR016040|IPR020626 Aspartate dehydrogenase|Aspartate/homoserine dehydrogenase, NAD-binding|L-aspartate dehydrogenase|L-aspartate dehydrogenase, prokaryotic|NAD(P)-binding domain GO:0006742|GO:0009435|GO:0016491|GO:0019363|GO:0033735|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_01265|PF01958|PF03447|PIRSF005227|SSF51735|SSF55347 ALFP_RS12025 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SSF51735 ALFP_RS12030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PR00111|SSF53474 ALFP_RS12035 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS12040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS12045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 ALFP_RS12050 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 ALFP_RS12055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023614 Porin domain G3DSA:2.40.160.10|PF13609|SSF56935 ALFP_RS12060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 ALFP_RS12065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018715 Protein of unknown function DUF2239 PF09998 ALFP_RS12070 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008775|IPR012774 Ectoine dioxygenase|Phytanoyl-CoA dioxygenase GO:0016706|GO:0055114 G3DSA:2.60.120.620|PF05721|SSF51197|TIGR02408 ALFP_RS12075 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010462|IPR011051|IPR014710 Ectoine synthase|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0019491|GO:0033990 G3DSA:2.60.120.10|MF_01255|PD080544|PF06339|SSF51182 ALFP_RS12080 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004637|IPR005814|IPR012773|IPR015421|IPR015422|IPR015424 2,4-diaminobutyrate 4-transaminase|Aminotransferase class-III|Ectoine biosynthetic protein|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0009058|GO:0019491|GO:0030170|GO:0047307 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|SSF53383|TIGR00709|TIGR02407 ALFP_RS12085 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR012772|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain|L-2,4-diaminobutyric acid acetyltransferase GO:0008080|GO:0019491|GO:0033816 G3DSA:3.40.630.30|PF00583|SSF55729|TIGR02406 ALFP_RS12090 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991|IPR022689 Iron dependent repressor|MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355|GO:0046914 G3DSA:1.10.10.10|PF01047|PR00598|SM00347|SM00529|SSF46785 ALFP_RS12095 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS12100 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002510|IPR025502 Metalloprotease TldD/PmbA|TldD GO:0006508|GO:0008237 PF01523|PIRSF004919|SSF111283 ALFP_RS12105 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001801|IPR027444 Histone-like protein H-NS|Histone-like protein H-NS, C-terminal domain GO:0003677|GO:0005622|GO:0006355 G3DSA:4.10.430.10|PF00816|SM00528|SSF81273 ALFP_RS12110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025411 Domain of unknown function DUF4136 PF13590 ALFP_RS12115 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012779|IPR014782|IPR024601 Peptidase M1, alanyl aminopeptidase|Peptidase M1, alanyl aminopeptidase, C-terminal|Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 G3DSA:1.10.390.10|G3DSA:1.25.50.10|PF01433|PF11940|PR00756|SSF55486|SSF63737|TIGR02414 ALFP_RS12120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000146|IPR028343|IPR033391 Fructose-1,6-bisphosphatase|Fructose-1,6-bisphosphatase class 1|Fructose-1-6-bisphosphatase class I, N-terminal GO:0005975|GO:0006001|GO:0016791|GO:0042132 G3DSA:3.30.540.10|G3DSA:3.40.190.80|MF_01855|PF00316|PIRSF000904|PIRSF500210|PR00115|SSF56655 ALFP_RS12125 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002364|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain|Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS01162|SM00829|SSF50129|SSF51735 ALFP_RS12130 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS12135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011829|IPR019818|IPR024084 Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain|Tartrate dehydrogenase GO:0000287|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PS00470|SM01329|SSF53659|TIGR02089 ALFP_RS12140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006140|IPR016040|IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|NAD(P)-binding domain GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF02826|PS00671|SSF51735 ALFP_RS12145 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR027417|IPR033186 Helicase HerA-like C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF05872|SSF52540 ALFP_RS12150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002876|IPR017856|IPR026563|IPR026564|IPR029072 Integrase, N-terminal zinc-binding domain-like|Transcriptional regulator TACO1-like|Transcriptional regulator TACO1-like, domain 2|Transcriptional regulator TACO1-like, domain 3|YebC-like G3DSA:1.10.10.200|G3DSA:3.30.1270.10|G3DSA:3.30.70.980|MF_00693|PF01709|SSF75625|TIGR01033 ALFP_RS12155 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000115|IPR011054|IPR013815|IPR013816|IPR016185|IPR020560|IPR020561|IPR020562 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylglycinamide synthetase|Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain|Phosphoribosylglycinamide synthetase, C-domain|Phosphoribosylglycinamide synthetase, N-terminal|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004637|GO:0005524|GO:0009113 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|G3DSA:3.90.600.10|MF_00138|PF01071|PF02843|PF02844|SM01209|SM01210|SSF51246|SSF52440|SSF56059|TIGR00877 ALFP_RS12160 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001260|IPR018375 Coproporphyrinogen III oxidase, aerobic|Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 G3DSA:3.40.1500.10|MF_00333|PF01218|PIRSF000166|PR00073|PS01021|SSF102886 ALFP_RS12165 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004821|IPR005248|IPR014729 Cytidyltransferase-like domain|Probable nicotinate-nucleotide adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0009058|GO:0009435|GO:0016779 G3DSA:3.40.50.620|MF_00244|PF01467|SSF52374|TIGR00482 ALFP_RS12170 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004394 Protein Iojap/ribosomal silencing factor RsfS G3DSA:3.30.460.10|MF_01477|PF02410|SSF81301|TIGR00090 ALFP_RS12175 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003742|IPR016051|IPR029026|IPR029028 Alpha/beta knot methyltransferases|Ribosomal RNA large subunit methyltransferase H|SPOUT methyltransferase, predicted|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0005737|GO:0006364|GO:0008168|GO:0031167 G3DSA:3.40.1280.10|MF_00658|PF02590|PIRSF004505|SSF75217|TIGR00246 ALFP_RS12180 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003697|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein GO:0005737 G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|SSF52972|TIGR00172 ALFP_RS12185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012336|IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal|Thioredoxin-like fold G3DSA:3.40.30.10|PF13098|SSF52833|SSF54423 ALFP_RS12190 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR027396 DsrEFH-like G3DSA:3.40.1260.10|SSF75169 ALFP_RS12195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010583 MltA-interacting MipA|TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 G3DSA:2.40.170.20|PF06629|SSF56935 ALFP_RS12200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001950|IPR005872 Archaeal/bacterial translation initiation factor SUI1|Translation initiation factor SUI1 GO:0003743|GO:0006413 G3DSA:3.30.780.10|PF01253|PIRSF037511|SSF55159 ALFP_RS12205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010352 Protein of unknown function DUF945 PF06097 ALFP_RS12210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|SSF48179|SSF51735 ALFP_RS12215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004045|IPR005955|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Maleylacetoacetate isomerase|Thioredoxin-like fold GO:0003824|GO:0005515|GO:0005737|GO:0009072 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF02798|SSF47616|SSF52833|TIGR01262 ALFP_RS12220 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 MF_00191|PF02401|TIGR00216 ALFP_RS12225 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 G3DSA:3.10.50.40|PF00254|SSF54534 ALFP_RS12230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001405|IPR010994|IPR020891|IPR025657 RadC protein|RadC-like JAB domain|RuvA domain 2-like|Uncharacterised protein family UPF0758, conserved site G3DSA:1.10.150.20|G3DSA:3.40.140.10|PF04002|PS01302|SSF102712|SSF47781|TIGR00608 ALFP_RS12235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000281|IPR001347|IPR009057|IPR011991 Helix-turn-helix protein RpiR|Homeodomain-like|Sugar isomerase (SIS)|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005975|GO:0006355|GO:0030246 G3DSA:1.10.10.10|G3DSA:3.40.50.10490|PF01380|PF01418|SSF46689|SSF53697 ALFP_RS12240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005828|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|SSF103473 ALFP_RS12250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS12255 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PF01197|PR01249|PS01143|SSF143800|TIGR00105 ALFP_RS12265 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|TIGR00797 ALFP_RS12270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR005892|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Glycine betaine transport ATP-binding subunit|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016020|GO:0016887|GO:0031460 G3DSA:3.10.580.10|G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|SSF54631|TIGR01186 ALFP_RS12275 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS12280 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 G3DSA:3.40.190.10|G3DSA:3.40.190.100|PF04069|SSF53850 ALFP_RS12285 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003333|IPR029063 Mycolic acid cyclopropane synthase|S-adenosyl-L-methionine-dependent methyltransferase GO:0008610 G3DSA:3.40.50.150|PF02353|PIRSF003085|SSF53335 ALFP_RS12295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004812|IPR011701|IPR020846 Drug resistance transporter Bcr/CmlA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473|TIGR00710 ALFP_RS12300 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001383|IPR026569 Ribosomal protein L28|Ribosomal protein L28/L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.170.40|MF_00373|PF00830|SSF143800|TIGR00009 ALFP_RS12305 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001705|IPR011332|IPR018264 Ribosomal protein L33|Ribosomal protein L33, conserved site|Zinc-binding ribosomal protein GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00294|PF00471|PS00582|SSF57829|TIGR01023 ALFP_RS12310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001412|IPR002300|IPR002302|IPR009008|IPR009080|IPR013155|IPR014729|IPR015413|IPR025709 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Leucine-tRNA ligase|Leucyl-tRNA synthetase, editing domain|Methionyl/Leucyl tRNA synthetase|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004823|GO:0005524|GO:0006418|GO:0006429 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_00049_B|PF00133|PF08264|PF09334|PF13603|PR00985|PS00178|SSF47323|SSF50677|SSF52374|TIGR00396 ALFP_RS12315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 G3DSA:3.30.160.150|MF_01186|PF04390 ALFP_RS12320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005790|IPR008921|IPR010372|IPR027417 DNA polymerase III delta, N-terminal|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, delta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.20|G3DSA:3.40.50.300|PF06144|SSF48019|SSF52540|TIGR01128 ALFP_RS12325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000965|IPR012134|IPR015590|IPR016161|IPR016162|IPR016163|IPR020593 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase|GPR domain|Gamma-glutamyl phosphate reductase GPR, conserved site|Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0008152|GO:0016491|GO:0016620|GO:0050661|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|MF_00412|PF00171|PIRSF000151|PS01223|SSF53720|TIGR00407 ALFP_RS12330 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005265 Uncharacterised protein family UPF0093 PF03653|PIRSF004638 ALFP_RS12335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000241|IPR002052|IPR004114|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Putative RNA methylase domain|S-adenosyl-L-methionine-dependent methyltransferase|THUMP domain GO:0003676|GO:0003723|GO:0008168|GO:0032259 G3DSA:3.40.50.150|PF01170|PF02926|PS00092|PS01261|SM00981|SSF53335 ALFP_RS12340 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010432 RDD PF06271 ALFP_RS12345 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000397|IPR016153|IPR016154|IPR023212 Heat shock protein Hsp33|Heat shock protein Hsp33, C-terminal|Heat shock protein Hsp33, N-terminal|Heat shock protein Hsp33, helix hairpin bin domain GO:0005737|GO:0006457|GO:0051082 G3DSA:1.10.287.480|G3DSA:3.55.30.10|G3DSA:3.90.1280.10|PF01430|PIRSF005261|SSF118352|SSF64397 ALFP_RS12355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007060|IPR023081 Cell division protein FtsB|Septum formation initiator FtsL/DivIC GO:0007049 MF_00599|PF04977 ALFP_RS12360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000941|IPR020809|IPR020810|IPR020811|IPR029017|IPR029065 Enolase|Enolase C-terminal domain-like|Enolase N-terminal domain-like|Enolase, C-terminal TIM barrel domain|Enolase, N-terminal|Enolase, conserved site GO:0000015|GO:0000287|GO:0004634|GO:0006096 G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_00318|PF00113|PF03952|PIRSF001400|PR00148|PS00164|SM01192|SM01193|SSF51604|SSF54826|TIGR01060 ALFP_RS12365 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|SM00347|SSF46785 ALFP_RS12370 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS12375 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|SSF51735 ALFP_RS12380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010753|IPR011008 Dimeric alpha-beta barrel|Domain of unknown function DUF1330 G3DSA:3.30.70.900|PF07045|SSF54909 ALFP_RS12385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006218|IPR006269|IPR013785 3-deoxy-8-phosphooctulonate synthase|Aldolase-type TIM barrel|DAHP synthetase I/KDSA GO:0003824|GO:0005737|GO:0008152|GO:0008676|GO:0009058 G3DSA:3.20.20.70|MF_00056|PF00793|SSF51569|TIGR01362 ALFP_RS12390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 ALFP_RS12395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004468|IPR017456|IPR017926|IPR027417|IPR029062 CTP synthase|CTP synthase, N-terminal|Class I glutamine amidotransferase-like|Glutamine amidotransferase|P-loop containing nucleoside triphosphate hydrolase GO:0003883|GO:0006221 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_01227|PF00117|PF06418|SSF52317|SSF52540|TIGR00337 ALFP_RS12400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000587|IPR000994|IPR028980|IPR029149|IPR032416 Creatinase, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, C-terminal domain|Peptidase M24, structural domain GO:0016787 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF01321|PF16188|PF16189|SSF53092|SSF55920 ALFP_RS12405 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004164|IPR004165|IPR012791 3-oxoacid CoA-transferase, subunit B|Coenzyme A transferase active site|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.810.20|PF01144|PS01274|SM00882|SSF100950|TIGR02428 ALFP_RS12410 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004163|IPR004165|IPR012792 3-oxoacid CoA-transferase, subunit A|Coenzyme A transferase binding site|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.1080.10|PF01144|PS01273|SM00882|SSF100950|TIGR02429 ALFP_RS12415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|PF13279|SSF54637 ALFP_RS12420 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007859|IPR023753 ETF-QO/FixX|FAD/NAD(P)-binding domain GO:0016491|GO:0051536|GO:0055114 G3DSA:3.50.50.60|PF05187|PF13450|PR00420|SSF51905|SSF54373|SSF54862 ALFP_RS12425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS12430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000873|IPR011904|IPR020845|IPR025110|IPR032387 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Acetate-CoA ligase|Acetyl-coenzyme A synthetase, N-terminal domain GO:0003824|GO:0003987|GO:0008152|GO:0016208|GO:0019427 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|MF_01123|PF00501|PF13193|PF16177|PS00455|SSF56801|TIGR02188 ALFP_RS12435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR020846|IPR024671 Autophagy-related protein 22-like|Major facilitator superfamily domain G3DSA:1.20.1250.20|PF11700|SSF103473 ALFP_RS12440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000064 Endopeptidase, NLPC/P60 domain G3DSA:3.90.1720.10|PF00877|SSF54001 ALFP_RS12445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016772 Uncharacterised conserved protein UCP020408 PF10087|PIRSF020408 ALFP_RS12450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS12455 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010061|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase|Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|SSF53720|TIGR01722 ALFP_RS12460 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS12465 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005495|IPR030922 LPS export ABC transporter permease LptF|Permease LptG/LptF-related GO:0016021|GO:0043190|GO:0055085 PF03739|TIGR04407 ALFP_RS12470 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000819|IPR008283|IPR011356|IPR023042 Peptidase M17, leucine aminopeptidase|Peptidase M17, leucine aminopeptidase/peptidase B|Peptidase M17, leucyl aminopeptidase, C-terminal|Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0005737|GO:0006508|GO:0008235|GO:0019538|GO:0030145 G3DSA:3.40.220.10|G3DSA:3.40.630.10|MF_00181|PF00883|PF02789|PR00481|PS00631|SSF52949|SSF53187 ALFP_RS12475 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 G3DSA:3.40.50.10110|PF04364|SSF102400 ALFP_RS12480 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic PF01027 ALFP_RS12485 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001451|IPR011004 Hexapeptide repeat|Trimeric LpxA-like G3DSA:1.10.3130.10|G3DSA:2.160.10.10|PF00132|SSF51161 ALFP_RS12490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 SSF103481|TIGR00688 ALFP_RS12495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002716 PIN domain PF13470 ALFP_RS12500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003717|IPR012340|IPR022572 DNA replication/recombination mediator RecO, N-terminal|Nucleic acid-binding, OB-fold|Recombination protein O, RecO GO:0006281|GO:0006310 G3DSA:2.40.50.140|PF02565|PF11967|SSF50249|SSF57863|TIGR00613 ALFP_RS12505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004044|IPR005225|IPR005662|IPR006073|IPR009019|IPR015946|IPR027417 GTP binding domain|GTP-binding protein Era|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0003723|GO:0005525|GO:0005622 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00367|PF01926|PF07650|PR00326|SSF52540|SSF54814|TIGR00231|TIGR00436 ALFP_RS12510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000999|IPR011907|IPR014720 Double-stranded RNA-binding domain|Ribonuclease III|Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396|GO:0016075 G3DSA:1.10.1520.10|G3DSA:3.30.160.20|MF_00104|PF00035|PF14622|PS00517|SM00358|SM00535|SSF54768|SSF69065|TIGR02191 ALFP_RS12515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000223|IPR015927|IPR019533|IPR019756|IPR019757|IPR019758|IPR019759|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Peptidase S26|Peptidase S26A, signal peptidase I|Peptidase S26A, signal peptidase I, conserved site|Peptidase S26A, signal peptidase I, lysine active site|Peptidase S26A, signal peptidase I, serine active site GO:0006508|GO:0008236|GO:0016020|GO:0016021 G3DSA:2.10.109.10|PF00717|PF10502|PR00727|PS00501|PS00760|PS00761|SSF51306|TIGR02227 ALFP_RS12520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006297|IPR009000|IPR009022|IPR013842|IPR027417|IPR031157 Elongation factor 4|Elongation factor G, III-V domain|GTP-binding protein LepA, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00071|PF00009|PF00679|PF03144|PF06421|PR00315|PS00301|SM00838|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01393 ALFP_RS12525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|SM00228|SSF50156|SSF50494|TIGR02037 ALFP_RS12530 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005588|IPR033434|IPR033436 MucB/RseB|MucB/RseB, C-terminal|MucB/RseB, N-terminal G3DSA:2.50.20.10|PF03888|PF17188|PIRSF005427 ALFP_RS12535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 PF03872|SSF89069 ALFP_RS12540 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000838|IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284|IPR014286 RNA polymerase sigma factor 70, ECF, conserved site|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 RpoE type|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PS01063|SSF88659|SSF88946|TIGR02937|TIGR02939 ALFP_RS12550 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR014030|IPR014031|IPR016039|IPR017568|IPR018201|IPR020841 3-oxoacyl-[acyl-carrier-protein] synthase 2|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0006633|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00109|PF02801|PIRSF000447|PS00606|SM00825|SSF53901|TIGR03150 ALFP_RS12555 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003231|IPR006162|IPR009081 Acyl carrier protein (ACP)|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain GO:0006633 G3DSA:1.10.1200.10|MF_01217|PD000887|PF00550|PS00012|SSF47336|TIGR00517 ALFP_RS12560 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR011284|IPR016040|IPR020904 3-oxoacyl-(acyl-carrier-protein) reductase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0004316|GO:0006633|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735|TIGR01830 ALFP_RS12565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001227|IPR004410|IPR014043|IPR016035|IPR016036|IPR020801|IPR024925 Acyl transferase|Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Malonyl CoA-acyl carrier protein transacylase|Malonyl CoA-acyl carrier protein transacylase, FabD-type|Malonyl-CoA ACP transacylase, ACP-binding|Polyketide synthase, acyl transferase domain GO:0003824|GO:0004314|GO:0008152|GO:0016740 G3DSA:3.30.70.250|G3DSA:3.40.366.10|PF00698|PIRSF000446|SM00827|SSF52151|SSF55048|TIGR00128 ALFP_RS12570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004655|IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|3-oxoacyl-[acyl-carrier-protein] synthase 3|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:3.40.47.10|MF_01815|PF08541|PF08545|SSF53901|TIGR00747 ALFP_RS12575 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003664|IPR012281|IPR024084 Fatty acid synthesis PlsX protein|Isopropylmalate dehydrogenase-like domain|Phospholipid biosynthesis protein, PlsX-like GO:0003824|GO:0006633|GO:0016616|GO:0016747|GO:0055114 G3DSA:3.40.718.10|MF_00019|PF02504|PIRSF002465|SSF53659|TIGR00182 ALFP_RS12580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002677|IPR011332 Ribosomal protein L32p|Zinc-binding ribosomal protein GO:0003735|GO:0006412|GO:0015934 MF_00340|PF01783|SSF57829|TIGR01031 ALFP_RS12585 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003772 Protein of unknown function DUF177 PF02620 ALFP_RS12590 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003697|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein GO:0005737 G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|SSF52972|TIGR00172 ALFP_RS12595 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000878|IPR008189|IPR014776 Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I GO:0008152|GO:0008168 G3DSA:3.30.950.10|PIRSF005917|SSF53790 ALFP_RS12600 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002477|IPR002502 N-acetylmuramoyl-L-alanine amidase domain|Peptidoglycan binding-like GO:0008745|GO:0009253 G3DSA:1.10.101.10|G3DSA:3.40.80.10|PF01471|PF01510|SM00644|SSF47090|SSF55846 ALFP_RS12605 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013130|IPR022837 Ferric reductase transmembrane component-like domain|Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 MF_01207|PF01794 ALFP_RS12610 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000572|IPR022867 Oxidoreductase, molybdopterin-binding domain|Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0042128|GO:0043546|GO:0055114 G3DSA:3.90.420.10|MF_01206|PF00174|SSF56524 ALFP_RS12615 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01509|TIGR01549 ALFP_RS12620 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|PF00849|PF01479|PS01129|SM00363|SSF55120|SSF55174|TIGR00005 ALFP_RS12625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003029|IPR004659|IPR012340|IPR019307|IPR022967|IPR028878 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E|Ribonuclease E/G|S1 domain GO:0003676|GO:0003723|GO:0004540|GO:0006396|GO:0008995 G3DSA:2.40.50.140|MF_00970|PF00575|PF10150|SM00316|SSF50249|TIGR00757 ALFP_RS12630 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000022|IPR000438|IPR029045 Acetyl-CoA carboxylase carboxyl transferase, beta subunit|Carboxyl transferase|ClpP/crotonase-like domain GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|MF_01395|PF01039|PR01070|SSF52096|TIGR00515 ALFP_RS12635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002028|IPR011060|IPR013785 Aldolase-type TIM barrel|Ribulose-phosphate binding barrel|Tryptophan synthase, alpha chain GO:0003824|GO:0004834|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00131|PF00290|SSF51366|TIGR00262 ALFP_RS12640 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001926|IPR006653|IPR006654|IPR023026 Tryptophan synthase beta chain/beta chain-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme|Tryptophan synthase, beta chain|Tryptophan synthase, beta chain, conserved site GO:0000162|GO:0004834|GO:0006568 G3DSA:3.40.50.1100|MF_00133|PF00291|PIRSF001413|PS00168|SSF53686|TIGR00263 ALFP_RS12645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002912|IPR003607|IPR004095|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain|HD/PDEase domain|RelA/SpoT|TGS|TGS-like GO:0008152|GO:0015969|GO:0016597 G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|SM00954|SSF109604|SSF55021|SSF81271|SSF81301 ALFP_RS12650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|SSF52218 ALFP_RS12655 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002638|IPR006406|IPR007229 Nicotinate phosphoribosyltransferase|Nicotinate phosphoribosyltransferase family|Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0004516|GO:0009435|GO:0019357 G3DSA:3.20.140.10|MF_00570|PF04095|PIRSF000484|SSF51690|SSF54675|TIGR01514 ALFP_RS12660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000813|IPR017896|IPR017900|IPR022569 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|7Fe ferredoxin|Ferredoxin, C-terminal GO:0009055 G3DSA:3.30.70.20|PF00037|PF11953|PR00354|PS00198|SSF54862 ALFP_RS12665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009656|IPR010915|IPR029058 Alpha/Beta hydrolase fold|PHB de-polymerase, C-terminal|Polyhydroxyalkanoate depolymerase G3DSA:3.40.50.1820|PF06850|PIRSF020818|SSF53474|TIGR01849 ALFP_RS12670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007202|IPR010207|IPR017900 4Fe-4S domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 G3DSA:3.30.70.20|PF04060|PF14697|PS00198|SSF54862|TIGR01944 ALFP_RS12675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000445|IPR003265|IPR003651|IPR004035|IPR004036|IPR005759|IPR011257|IPR023170 DNA glycosylase|Endonuclease III|Endonuclease III, iron-sulphur binding site|Endonuclease III-like, conserved site-2|Endonuclease III-like, iron-sulphur cluster loop motif|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003677|GO:0003824|GO:0003906|GO:0006281|GO:0006284|GO:0051539 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|MF_00942|PF00633|PF00730|PF10576|PIRSF001435|PS00764|PS01155|SM00478|SM00525|SSF48150|TIGR01083 ALFP_RS12680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR027417 ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SSF52540 ALFP_RS12685 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005618|IPR011250 Outer membrane protein, OmpW|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021|GO:0019867 G3DSA:2.40.160.20|PF03922|SSF56925 ALFP_RS12690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS12695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851|IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, permease|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0006810|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PF02653|PF12399|SM00382|SSF52540 ALFP_RS12700 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS12705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 ALFP_RS12710 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002579|IPR011057 Mss4-like|Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 G3DSA:2.170.150.20|MF_01400|PF01641|SSF51316|TIGR00357 ALFP_RS12715 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006008 Intracellular septation protein A GO:0016021 MF_00189|PF04279|TIGR00997 ALFP_RS12720 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002634 BolA protein G3DSA:3.30.70.1500|PF01722|PIRSF003113|SSF82657 ALFP_RS12725 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000297|IPR023058|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site|Trigger factor/SurA domain GO:0016853 G3DSA:3.10.50.40|PF00639|PS01096|SSF109998|SSF54534 ALFP_RS12730 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001357|IPR001679|IPR003583|IPR004149|IPR004150|IPR010994|IPR012340|IPR013839|IPR013840|IPR018239|IPR033136 BRCT domain|Helix-hairpin-helix DNA-binding motif, class 1|NAD-dependent DNA ligase|NAD-dependent DNA ligase, N-terminal|NAD-dependent DNA ligase, OB-fold|NAD-dependent DNA ligase, active site|NAD-dependent DNA ligase, adenylation|NAD-dependent DNA ligase, conserved site|Nucleic acid-binding, OB-fold|RuvA domain 2-like|Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003677|GO:0003911|GO:0006260|GO:0006281 G3DSA:1.10.150.20|G3DSA:1.10.287.610|G3DSA:2.40.50.140|G3DSA:3.30.470.30|G3DSA:3.40.50.10190|MF_01588|PF00533|PF01653|PF03119|PF03120|PF12826|PF14520|PIRSF001604|PS01055|PS01056|SM00278|SM00292|SM00532|SSF47781|SSF50249|SSF52113|SSF56091|TIGR00575 ALFP_RS12735 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 G3DSA:3.30.1400.10|PD035754|PF04354|SM00771|SSF64383 ALFP_RS12740 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003395|IPR010935|IPR011890|IPR024704|IPR027417 P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal|SMCs flexible hinge|Structural maintenance of chromosomes protein|Structural maintenance of chromosomes protein, prokaryotic GO:0005515|GO:0005524|GO:0005694|GO:0007062|GO:0030261|GO:0051276 G3DSA:3.40.50.300|MF_01894|PF02463|PF06470|PIRSF005719|SM00968|SSF52540|SSF75553|TIGR02168 ALFP_RS12745 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS12750 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005122|IPR005273 Uracil-DNA glycosylase, family 4 domain|Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|SM00986|SM00987|SSF52141|TIGR00758 ALFP_RS12755 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR000905|IPR006464|IPR016181|IPR022496 Acyl-CoA N-acyltransferase|GNAT domain|Gcp-like domain|Ribosomal-protein-alanine acetyltransferase|tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949|GO:0006474|GO:0008080|GO:0016407 G3DSA:3.30.420.40|G3DSA:3.40.630.30|PF00583|PF00814|SSF53067|SSF55729|TIGR01575|TIGR03725 ALFP_RS12760 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172 ALFP_RS12765 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003594|IPR003660|IPR003661|IPR004358|IPR032408 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Sensor histidine kinase RisS, periplasmic domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PF16524|PR00344|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55874 ALFP_RS12770 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003526|IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685|GO:0016114 G3DSA:3.30.1330.50|MF_00107|PF02542|PS01350|SSF69765|TIGR00151 ALFP_RS12775 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001228|IPR018294|IPR029044 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0008299|GO:0050518 G3DSA:3.90.550.10|MF_00108|PF01128|PS01295|SSF53448|TIGR00453 ALFP_RS12780 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001650|IPR003711|IPR004576|IPR005118|IPR011545|IPR014001|IPR027417 CarD-like/TRCF domain|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transcription-repair coupling factor|Transcription-repair-coupling factor, C-terminal domain GO:0003676|GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|MF_00969|PF00270|PF00271|PF02559|PF03461|SM00487|SM00490|SM00982|SM01058|SSF141259|SSF143517|SSF52540|TIGR00580 ALFP_RS12785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006383|IPR023190|IPR023214|IPR025138 Domain of unknown function DUF4072|HAD-like domain|HAD-superfamily hydrolase, subfamily IB, PSPase-like|Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564|GO:0008152|GO:0016791 G3DSA:1.10.150.210|G3DSA:3.40.50.1000|PF12710|PF13284|SSF56784|TIGR00338|TIGR01488 ALFP_RS12790 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004136|IPR013785 Aldolase-type TIM barrel|Nitronate monooxygenase GO:0003824|GO:0018580|GO:0055114 G3DSA:3.20.20.70|PF03060|SSF51412 ALFP_RS12795 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016768 Uncharacterised conserved protein UCP019883, membrane PF10993 ALFP_RS12800 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001750|IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 MF_00445|PF00361|TIGR01770 ALFP_RS12805 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000260|IPR001750|IPR003918|IPR010227 NADH-quinone oxidoreductase, chain M/4|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|NADH:ubiquinone oxidoreductase|NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0008137|GO:0042773|GO:0055114 PF00361|PF01059|PR01437|TIGR01972 ALFP_RS12810 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001516|IPR001750|IPR003945|IPR018393 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal|NADH-plastoquinone oxidoreductase, chain 5|NADH-plastoquinone oxidoreductase, chain 5 subgroup|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 PF00361|PF00662|PR01434|PR01435|TIGR01974 ALFP_RS12815 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 MF_01456|PF00420 ALFP_RS12820 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 PF00499 ALFP_RS12825 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010226|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 G3DSA:1.10.1060.10|MF_01351|PF12838|PS00198|SSF54862|TIGR01971 ALFP_RS12830 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001694|IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site|NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 MF_01350|PF00146|PS00668 ALFP_RS12835 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000283|IPR001041|IPR006656|IPR006657|IPR009010|IPR010228|IPR012675|IPR019574 2Fe-2S ferredoxin-type iron-sulfur binding domain|Aspartate decarboxylase-like domain|Beta-grasp domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site|NADH:ubiquinone oxidoreductase, subunit G|NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0008137|GO:0009055|GO:0016020|GO:0016491|GO:0016651|GO:0030151|GO:0042773|GO:0051536|GO:0055114 G3DSA:2.40.40.20|G3DSA:3.10.20.30|G3DSA:3.40.50.740|PF00384|PF01568|PF10588|PF13510|PS00641|PS00642|SM00929|SSF50692|SSF53706|SSF54292|SSF54862|TIGR01973 ALFP_RS12840 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001949|IPR011537|IPR011538|IPR019554|IPR019575 NADH ubiquinone oxidoreductase, F subunit|NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain|NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site|Soluble ligand binding domain GO:0008137|GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 PF01512|PF10531|PF10589|PS00645|SM00928|SSF140490|SSF142019|SSF142984|TIGR01959 ALFP_RS12845 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002023|IPR012336 NADH-quinone oxidoreductase subunit E-like|Thioredoxin-like fold GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF01257|PIRSF000216|SSF52833|TIGR01958 ALFP_RS12850 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001135|IPR014029|IPR022885|IPR029014 NAD(P)H-quinone oxidoreductase subunit D/H|NADH-quinone oxidoreductase, subunit D|NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site|NiFe hydrogenase-like GO:0016651|GO:0048038|GO:0051287|GO:0055114 G3DSA:1.10.645.10|MF_01358|PF00346|PS00535|SSF56762|TIGR01962 ALFP_RS12855 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001268|IPR010218|IPR020396 NADH dehydrogenase, subunit C|NADH:ubiquinone oxidoreductase, 30kDa subunit|NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0008137|GO:0016651|GO:0055114 MF_01357|PD001581|PF00329|PS00542|SSF143243|TIGR01961 ALFP_RS12860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006137|IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit|NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0008137|GO:0048038|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.40.50.700|MF_01356|PF01058|PS01150|SSF56770|TIGR01957 ALFP_RS12865 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000440|IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid|NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0016651|GO:0055114 MF_01394|PF00507 ALFP_RS12870 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001702|IPR002299|IPR023614 Porin domain|Porin, Gram-negative type|Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 G3DSA:2.40.160.10|PF13609|PR00182|PR00184|SSF56935 ALFP_RS12880 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PF03840|PR01651|TIGR00810 ALFP_RS12885 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000652|IPR013785|IPR020861|IPR022896 Aldolase-type TIM barrel|Triosephosphate isomerase|Triosephosphate isomerase, active site|Triosephosphate isomerase, bacterial/eukaryotic GO:0003824|GO:0004807|GO:0006096|GO:0008152 G3DSA:3.20.20.70|MF_00147_B|PF00121|PS00171|SSF51351|TIGR00419 ALFP_RS12890 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011032|IPR013149|IPR013154|IPR014189|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain|Quinone oxidoreductase PIG3 GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735|TIGR02824 ALFP_RS12905 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011059|IPR013108|IPR032466 Amidohydrolase 3|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF07969|SSF51338|SSF51556 ALFP_RS12910 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001247|IPR003029|IPR004087|IPR004088|IPR012162|IPR012340|IPR015847|IPR015848|IPR020568|IPR022967|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|K Homology domain|K Homology domain, type 1|Nucleic acid-binding, OB-fold|PNPase/RNase PH domain|Polyribonucleotide nucleotidyltransferase|Polyribonucleotide nucleotidyltransferase, RNA-binding domain|RNA-binding domain, S1|Ribosomal protein S5 domain 2-type fold|S1 domain GO:0000175|GO:0003676|GO:0003723|GO:0004654|GO:0006396|GO:0006402 G3DSA:1.10.10.400|G3DSA:2.40.50.140|G3DSA:3.30.1370.10|G3DSA:3.30.230.70|MF_01595|PF00013|PF00575|PF01138|PF03725|PF03726|PIRSF005499|SM00316|SM00322|SSF46915|SSF50249|SSF54211|SSF54791|SSF55666|TIGR03591 ALFP_RS12915 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000589|IPR005290|IPR009068 Ribosomal protein S15|Ribosomal protein S15, bacterial-type|S15/NS1, RNA-binding GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.10|MF_01343_B|PD157043|PF00312|PS00362|SM01387|SSF47060|TIGR00952 ALFP_RS12920 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000462|IPR004533 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--serine O-phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PF01066|PS00379|TIGR00473 ALFP_RS12925 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000506|IPR008927|IPR013023|IPR013116|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Acetohydroxy acid isomeroreductase C-terminal|Acetohydroxy acid isomeroreductase, NADPH-binding domain|Ketol-acid reductoisomerase|NAD(P)-binding domain GO:0004455|GO:0009082|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|MF_00435|PF01450|PF07991|SSF48179|SSF51735|TIGR00465 ALFP_RS12930 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004789|IPR019455 Acetolactate synthase, small subunit|Acetolactate synthase, small subunit, C-terminal GO:0003984|GO:0009082 G3DSA:3.30.70.1150|G3DSA:3.30.70.260|PD002844|PF10369|PF13710|SSF55021|TIGR00119 ALFP_RS12935 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011766|IPR012000|IPR012001|IPR012846|IPR029035|IPR029061 Acetolactate synthase, large subunit, biosynthetic|DHS-like NAD/FAD-binding domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0003984|GO:0009082|GO:0030976|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|SSF52467|SSF52518|TIGR00118 ALFP_RS12940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR032692 Integral membrane protein YccS, N-terminal PF12805|PF13515 ALFP_RS12945 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005583 Peroxide stress protein YaaA MF_00652|PF03883 ALFP_RS12950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR011294|IPR016040|IPR020904 3-hydroxybutyrate dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0003858|GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SSF51735|TIGR01963 ALFP_RS12975 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002314|IPR002317|IPR010978|IPR015866 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Serine-tRNA ligase, type1|Serine-tRNA synthetase, type1, N-terminal|tRNA-binding arm GO:0000166|GO:0004812|GO:0004828|GO:0005524|GO:0005737|GO:0006418|GO:0006434 G3DSA:1.10.287.40|G3DSA:3.30.930.10|MF_00176|PF00587|PF02403|PIRSF001529|PR00981|SSF46589|SSF55681|TIGR00414 ALFP_RS12980 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003593|IPR003959|IPR008921|IPR021886|IPR027417|IPR032423 AAA ATPase, C-terminal domain|AAA+ ATPase domain|ATPase, AAA-type, core|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|MgsA AAA+ ATPase C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0006260 G3DSA:1.10.3710.10|G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF00004|PF12002|PF16193|SM00382|SSF48019|SSF52540 ALFP_RS12985 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004564|IPR018323|IPR029046 Lipoprotein localisation LolA/LolB/LppX|Outer membrane lipoprotein carrier protein LolA, Proteobacteria|Outer membrane lipoprotein carrier protein LolA-like GO:0042597|GO:0042953|GO:0042954 G3DSA:2.50.20.10|MF_00240|PF03548|SSF89392|TIGR00547 ALFP_RS12990 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002543|IPR003593|IPR011991|IPR018541|IPR025199|IPR027417 AAA+ ATPase domain|DNA translocase FtsK, 4TM region|FtsK domain|FtsK gamma domain|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003677|GO:0005524 G3DSA:3.40.50.300|PF01580|PF09397|PF13491|SM00382|SM00843|SSF46785|SSF52540 ALFP_RS12995 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000103|IPR005982|IPR008255|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin reductase GO:0004791|GO:0005737|GO:0016491|GO:0019430|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PS00573|SSF51905|TIGR01292 ALFP_RS13000 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002625 Smr domain PF01713|SM00463|SSF160443 ALFP_RS13005 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF14559|SM00028|SSF48452 ALFP_RS13010 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic SSF144052 ALFP_RS13015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00217|SSF103473 ALFP_RS13020 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|SM00903|SSF50475 ALFP_RS13025 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011008|IPR013097 Dimeric alpha-beta barrel|Stress responsive alpha-beta barrel G3DSA:3.30.70.900|PF07876|SM00886|SSF54909 ALFP_RS13030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011965|IPR012906|IPR013225 PaaX-like, C-terminal|PaaX-like, N-terminal|Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 PF07848|PF08223|PIRSF020623 ALFP_RS13035 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002018|IPR019826|IPR029058 Alpha/Beta hydrolase fold|Carboxylesterase type B, active site|Carboxylesterase, type B G3DSA:3.40.50.1820|PF00135|PS00122|SSF53474 ALFP_RS13040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009075|IPR009100|IPR013107|IPR013786 Acyl-CoA dehydrogenase, C-terminal domain|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF08028|PIRSF016578|SSF47203|SSF56645 ALFP_RS13045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004439|IPR019818|IPR024084 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0004450|GO:0006099|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PS00470|SM01329|SSF53659|TIGR00183 ALFP_RS13050 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR014993 Protein of unknown function DUF1841 PF08897 ALFP_RS13055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626 ALFP_RS13060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|SSF46626 ALFP_RS13065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003593|IPR011704|IPR027417 AAA+ ATPase domain|ATPase, dynein-related, AAA domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF07728|SM00382|SSF52540 ALFP_RS13070 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|SSF55729 ALFP_RS13075 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008912 Uncharacterised protein family CoxE-like PF05762 ALFP_RS13080 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021350 Protein of unknown function DUF2968 PF11180 ALFP_RS13085 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002078|IPR002197|IPR003593|IPR009057|IPR025662|IPR027417 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1 GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PF02954|PS00675|SM00382|SSF46689|SSF52540 ALFP_RS13090 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal PF13400 ALFP_RS13095 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR022053 Protein of unknown function DUF3613 PF12266 ALFP_RS13100 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF14559|SM00028|SSF48452 ALFP_RS13105 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018076 Type II secretion system F domain PF00482 ALFP_RS13110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018076 Type II secretion system F domain PF00482 ALFP_RS13115 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001482|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Type II secretion system protein E GO:0005524|GO:0006810 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|SSF52540 ALFP_RS13120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 ALFP_RS13125 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001775|IPR004846|IPR032789 GspD/PilQ family|Pilus formation protein, N-terminal|Type II/III secretion system GO:0009306 PF00263|PF13629|PR00811 ALFP_RS13130 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013974|IPR017592|IPR031571 Flp pilus assembly protein RcpC/CpaB domain|Pilus assembly, Flp-type CpaB|SAF domain PF08666|PF16976|SM00858|TIGR03177 ALFP_RS13135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012495 TadE-like PF07811 ALFP_RS13140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012495 TadE-like PF07811 ALFP_RS13145 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PF01478 ALFP_RS13150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007047 Flp/Fap pilin component PF04964 ALFP_RS13155 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013686 Polypeptide-transport-associated, ShlB-type G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF08479 ALFP_RS13160 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR031929 Bacterial collagen-like protein, middle domain PF15984 ALFP_RS13165 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|SM00347|SSF46785 ALFP_RS13170 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR031929 Bacterial collagen-like protein, middle domain PF15984 ALFP_RS13180 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|SM00347|SSF46785 ALFP_RS13185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001431|IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PS00143|SSF63411 ALFP_RS13190 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001305|IPR001623|IPR002939|IPR008971|IPR012724|IPR018253 Chaperone DnaJ|Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding|Heat shock protein DnaJ, cysteine-rich domain GO:0005524|GO:0006457|GO:0009408|GO:0031072|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.10.230.10|G3DSA:2.60.260.20|MF_01152|PF00226|PF00684|PF01556|PR00625|PS00636|SM00271|SSF46565|SSF49493|SSF57938|TIGR02349 ALFP_RS13195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012725|IPR013126|IPR018181|IPR029047|IPR029048 Chaperone DnaK|Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain|Heat shock protein 70kD, peptide-binding domain GO:0005524|GO:0006457|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.30.30|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_00332|PF00012|PR00301|PS00297|PS00329|PS01036|SSF100920|SSF100934|SSF53067|TIGR02350 ALFP_RS13200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000740|IPR009012|IPR013805 GrpE nucleotide exchange factor|GrpE nucleotide exchange factor, coiled-coil|GrpE nucleotide exchange factor, head GO:0000774|GO:0006457|GO:0042803|GO:0051087 G3DSA:2.30.22.10|G3DSA:3.90.20.20|MF_01151|PF01025|PR00773|PS01071|SSF51064|SSF58014 ALFP_RS13205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001015|IPR019772 Ferrochelatase|Ferrochelatase, active site GO:0004325|GO:0006783 G3DSA:3.40.50.1400|MF_00323|PF00762|PS00534|SSF53800|TIGR00109 ALFP_RS13210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002571|IPR005104|IPR011991|IPR021153|IPR029016 GAF domain-like|Heat-inducible transcription repressor HrcA|Heat-inducible transcription repressor HrcA, C-terminal|Winged helix-turn-helix DNA-binding domain|Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|MF_00081|PF01628|PF03444|PIRSF005485|SSF46785|SSF55781|TIGR00331 ALFP_RS13215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002504|IPR016064|IPR017437|IPR017438 ATP-NAD kinase, PpnK-type, all-beta|Inorganic polyphosphate/ATP-NAD kinase, domain 1|NAD kinase|NAD kinase/diacylglycerol kinase-like domain GO:0003951|GO:0006741|GO:0008152|GO:0019674 G3DSA:2.60.200.30|G3DSA:3.40.50.10330|MF_00361|PF01513|SSF111331 ALFP_RS13220 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003395|IPR004604|IPR027417 DNA recombination/repair protein RecN|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal GO:0005524|GO:0006281|GO:0006310 G3DSA:3.40.50.300|PF02463|PIRSF003128|SSF52540|TIGR00634 ALFP_RS13225 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|SSF46785 ALFP_RS13230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007450|IPR026592 Lipoprotein SmpA/OmlA|Outer membrane protein assembly factor BamE GO:0019867 MF_00925|PF04355 ALFP_RS13235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000846|IPR016040|IPR022663|IPR022664|IPR023940 Dihydrodipicolinate reductase|Dihydrodipicolinate reductase, C-terminal|Dihydrodipicolinate reductase, N-terminal|Dihydrodipicolinate reductase, conserved site|NAD(P)-binding domain GO:0008839|GO:0009089|GO:0055114 G3DSA:3.40.50.720|MF_00102|PF01113|PF05173|PIRSF000161|PS01298|SSF51735|SSF55347|TIGR00036 ALFP_RS13245 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 ALFP_RS13250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 ALFP_RS13255 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|SSF56796 ALFP_RS13260 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|SSF103473 ALFP_RS13265 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 ALFP_RS13270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003170|IPR006094|IPR011601|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|UDP-N-acetylenolpyruvoylglucosamine reductase|UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0003824|GO:0008762|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.90.78.10|MF_00037|PF01565|PF02873|SSF56176|SSF56194|TIGR00179 ALFP_RS13290 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000172|IPR007867|IPR012132|IPR023753 FAD/NAD(P)-binding domain|Glucose-methanol-choline oxidoreductase|Glucose-methanol-choline oxidoreductase, C-terminal|Glucose-methanol-choline oxidoreductase, N-terminal GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.50.50.60|PF00732|PF05199|PIRSF000137|PS00623|PS00624|SSF51905|SSF54373 ALFP_RS13295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR018060|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.280|PF12833|PF14525|PR00032|SM00342|SSF46689 ALFP_RS13300 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 ALFP_RS13305 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|G3DSA:2.20.200.10|PF02321|SSF56954|TIGR01845 ALFP_RS13310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003997|IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain|RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 G3DSA:2.40.50.100|PF16576|PR01490|SSF111369 ALFP_RS13315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS13320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689 ALFP_RS13325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007837|IPR027369 DNA damage-inducible protein DinB|DinB/YfiT-like putative metal-dependent hydrolase G3DSA:1.20.120.450|PF05163|SSF109854 ALFP_RS13330 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935|TIGR01783 ALFP_RS13335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004812|IPR011701|IPR020846 Drug resistance transporter Bcr/CmlA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473|TIGR00710 ALFP_RS13350 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000801|IPR029058 Alpha/Beta hydrolase fold|Putative esterase G3DSA:3.40.50.1820|PF00756|SSF53474 ALFP_RS13355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025291 Protein of unknown function DUF4153 PF13687 ALFP_RS13360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR014914 RES domain PF08808|SM00953 ALFP_RS13370 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001670|IPR018211 Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PS00913|SSF56796 ALFP_RS13375 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS13380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 ALFP_RS13385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS13390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS13395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 ALFP_RS13400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010102|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase|Succinate semialdehyde dehydrogenase GO:0008152|GO:0009013|GO:0009450|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|SSF53720|TIGR01780 ALFP_RS13405 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 ALFP_RS13410 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000629|IPR001650|IPR005580|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|DbpA, RNA-binding domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PF03880|PS00039|SM00487|SM00490|SSF52540 ALFP_RS13415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS13420 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001663|IPR015879|IPR017941 Aromatic-ring-hydroxylating dioxygenase, alpha subunit|Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0006725|GO:0016491|GO:0016708|GO:0019439|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|PR00090|SSF50022|SSF55961 ALFP_RS13425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000391|IPR032710 NTF2-like domain|Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 G3DSA:3.10.450.50|PF00866|SSF54427 ALFP_RS13430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|SSF50022 ALFP_RS13435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00081|PS00061|SSF51735 ALFP_RS13440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004099|IPR016156|IPR023753|IPR028202 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain|Reductase, C-terminal GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF07992|PF14759|PR00368|PR00411|SSF51905|SSF55424 ALFP_RS13445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004183|IPR023789 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase|Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0005506|GO:0006725|GO:0008198|GO:0016491|GO:0019439|GO:0047070|GO:0055114 G3DSA:3.40.830.10|MF_01653|PF02900|SSF53213 ALFP_RS13450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF12697|PR00111|PR00412|SSF53474 ALFP_RS13455 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|SSF56529 ALFP_RS13460 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000534|IPR003361|IPR015426|IPR016040 Acetaldehyde dehydrogenase|Acetaldehyde dehydrogenase, C-terminal|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding GO:0008774|GO:0016620|GO:0019439|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_01657|PF01118|PF09290|PIRSF015689|SM00859|SSF51735|SSF55347|TIGR03215 ALFP_RS13465 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000891|IPR012425|IPR013785|IPR017629 4-hydroxy-2-oxovalerate aldolase|Aldolase-type TIM barrel|DmpG-like communication|Pyruvate carboxyltransferase GO:0003824|GO:0008701|GO:0016833|GO:0019439 G3DSA:1.10.8.60|G3DSA:3.20.20.70|MF_01656|PD005364|PF00682|PF07836|SSF51569|SSF89000|TIGR03217 ALFP_RS13470 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|PS00217|SSF103473 ALFP_RS13485 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR020556|IPR023631 Amidase signature domain|Amidase, conserved site G3DSA:3.90.1300.10|PF01425|PS00571|SSF75304 ALFP_RS13490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|SM00345|SSF46785|SSF53383 ALFP_RS13495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS13500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 ALFP_RS13505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 ALFP_RS13510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR024501|IPR029058 Alpha/Beta hydrolase fold|Protein of unknown function DUF3141 G3DSA:3.40.50.1820|PF11339|SSF53474 ALFP_RS13515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002155|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|SSF53901|TIGR01930 ALFP_RS13520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR011283|IPR016040|IPR020904 Acetoacetyl-CoA reductase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0005737|GO:0016491|GO:0018454|GO:0042619|GO:0055114 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SM00822|SSF51735|TIGR01829 ALFP_RS13525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018968 Phasin PF09361 ALFP_RS13530 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic PF12698 ALFP_RS13535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12698|PS00211|SM00382|SSF52540 ALFP_RS13540 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain G3DSA:2.40.50.100|PF16576|SSF111369 ALFP_RS13545 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|G3DSA:2.20.200.10|PF02321|SSF56954|TIGR01845 ALFP_RS13550 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010941|IPR022211|IPR029058 Alpha/Beta hydrolase fold|Poly-beta-hydroxybutyrate polymerase N-terminal|Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 G3DSA:3.40.50.1820|PF07167|PF12551|SSF53474 ALFP_RS13555 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF16859|PR00455|SSF46689|SSF48498 ALFP_RS13560 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003744 Protein of unknown function DUF165 PF02592|TIGR00697 ALFP_RS13565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR014729|IPR018317 Queuosine biosynthesis protein QueC|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|MF_01633|PF06508|PIRSF006293|SSF52402|TIGR00364 ALFP_RS13570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001085|IPR015421|IPR015422|IPR015424|IPR019798 Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine hydroxymethyltransferase|Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0003824|GO:0004372|GO:0006544|GO:0006563|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00051|PF00464|PIRSF000412|PS00096|SSF53383 ALFP_RS13575 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR022278 Aminotransferase class V domain|Phosphoserine aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004648|GO:0006564 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00160|PF00266|PIRSF000525|SSF53383 ALFP_RS13580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|PF00155|PF00392|SM00345|SSF46785|SSF53383 ALFP_RS13585 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001085|IPR015421|IPR015422|IPR015424 Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine hydroxymethyltransferase GO:0003824|GO:0016740 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00051|PF00464|PIRSF000412|SSF53383 ALFP_RS13590 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025859 P-aminobenzoate N-oxygenase AurF PF11583 ALFP_RS13595 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR001433|IPR006058|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PS00197|SSF52343|SSF54292|SSF63380 ALFP_RS13600 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase G3DSA:3.40.50.880|PF00117|SSF52317 ALFP_RS13605 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004625|IPR013749|IPR029056 Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Pyridoxine kinase|Ribokinase-like GO:0008478|GO:0009443 G3DSA:3.40.1190.20|PF08543|SSF53613|TIGR00687 ALFP_RS13610 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000060|IPR018093 BCCT transporter family|BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 PF02028|PS01303|TIGR00842 ALFP_RS13615 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000551|IPR009061|IPR010211|IPR015358 MerR-type HTH domain|Putative DNA-binding domain|Redox-sensitive transcriptional activator SoxR|Transcription regulator MerR, DNA binding GO:0003677|GO:0006355|GO:0006979|GO:0051537 G3DSA:1.10.1660.10|PF00376|PF09278|PR00040|SM00422|SSF46955|TIGR01950 ALFP_RS13625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 ALFP_RS13630 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 ALFP_RS13635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|PF02321|SSF56954|TIGR01845 ALFP_RS13645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005561|IPR008327|IPR011006|IPR011991 ANTAR domain|CheY-like superfamily|Signal transduction response regulator, antiterminator|Winged helix-turn-helix DNA-binding domain GO:0003723 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF03861|PIRSF036382|SM01012|SSF52172 ALFP_RS13650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000709|IPR028082 Leu/Ile/Val-binding protein|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13433|PR00337|SSF53822 ALFP_RS13655 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003211 AmiS/UreI transporter GO:0006810|GO:0016020 PF02293 ALFP_RS13660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS13665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008168|IPR009056 Cytochrome c, class IC|Cytochrome c-like domain GO:0005506|GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PR00605|SSF46626 ALFP_RS13670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003468|IPR009056 Cytochrome c oxidase, monohaem subunit/FixO|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF02433|SSF46626 ALFP_RS13675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000883|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 G3DSA:1.20.210.10|PF00115|SSF81442 ALFP_RS13680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|SM00345|SSF46785|SSF53383 ALFP_RS13685 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR024311 Lipocalin-like domain PF13924 ALFP_RS13690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS13695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|SSF53383 ALFP_RS13700 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001920|IPR004391|IPR015942|IPR018187|IPR033134 Asp/Glu racemase|Asp/Glu racemase, active site 1|Asp/Glu racemase, active site 2|Asp/Glu/hydantoin racemase|Glutamate racemase GO:0006807|GO:0008152|GO:0008881|GO:0009252|GO:0016855|GO:0036361 G3DSA:3.40.50.1860|MF_00258|PF01177|PS00923|PS00924|SSF53681|TIGR00067 ALFP_RS13705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 ALFP_RS13710 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013320|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Concanavalin A-like lectin/glucanase domain GO:0003824|GO:0008152 G3DSA:2.60.120.200|G3DSA:3.40.720.10|PF13385|SSF49899|SSF53649 ALFP_RS13720 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007312|IPR008475|IPR017767 Bacterial phospholipase C, C-terminal domain|Bacterial phospholipase C, phosphocholine-specific|Phosphoesterase GO:0004629|GO:0016042|GO:0016788|GO:0034480 PF04185|PF05506|TIGR03396 ALFP_RS13735 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006664|IPR006665|IPR007450 Lipoprotein SmpA/OmlA|OmpA-like domain|Outer membrane protein, bacterial GO:0009279|GO:0016021|GO:0019867 G3DSA:3.30.1330.60|PF00691|PF04355|PR01021|SSF103088 ALFP_RS13740 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005594|IPR008635|IPR008640|IPR011049|IPR024973 Coiled stalk of trimeric autotransporter adhesin|ESPR domain|Head domain of trimeric autotransporter adhesin|Serralysin-like metalloprotease, C-terminal|YadA-like, C-terminal GO:0009405|GO:0019867 G3DSA:2.150.10.10|G3DSA:2.160.10.10|G3DSA:3.30.1300.30|PF03895|PF05658|PF05662|PF13018|SSF101967|SSF54523 ALFP_RS13745 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001633 EAL domain G3DSA:3.20.20.450|PF00563|SM00052|SSF141868 ALFP_RS13750 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006118|IPR006119|IPR009057 Homeodomain-like|Recombinase, conserved site|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:1.10.10.60|G3DSA:3.40.50.1390|PF00239|PS00397|PS00398|SM00857|SSF53041 ALFP_RS13755 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003004|IPR011850|IPR018076 General secretion pathway protein F|GspF/PilC family|Type II secretion system F domain GO:0008565|GO:0015627|GO:0015628 PF00482|PR00812|TIGR02120 ALFP_RS13760 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001482|IPR003593|IPR013369|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Type II secretion system GspE|Type II secretion system protein E GO:0005524|GO:0006810|GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PS00662|SM00382|SSF160246|SSF52540|TIGR02533 ALFP_RS13765 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001775|IPR004846|IPR005644|IPR013356 GspD/PilQ family|NolW-like|Type II secretion system GspD|Type II/III secretion system GO:0008565|GO:0009306|GO:0015627|GO:0015628|GO:0019867 PF00263|PF03958|PR00811|TIGR02517 ALFP_RS13770 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR022792 Type II secretion system, protein N PF01203 ALFP_RS13775 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007690 Type II secretion system, protein M GO:0006858 PF04612 ALFP_RS13780 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025691 GspL periplasmic domain PF12693|SSF53067 ALFP_RS13785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 G3DSA:3.30.1300.30|PF03934|SSF54523 ALFP_RS13790 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012902 Prokaryotic N-terminal methylation site PF13633|PS00409|SSF54523|TIGR02532 ALFP_RS13795 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003413|IPR010052|IPR012902 Prokaryotic N-terminal methylation site|Type II secretion system protein I|Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 PF02501|PF13633|PS00409|SSF54523|TIGR01707|TIGR02532 ALFP_RS13800 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002416|IPR012902 Prokaryotic N-terminal methylation site|Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PF13633|PS00409|SSF54523|TIGR01708|TIGR02532 ALFP_RS13805 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000983|IPR010054|IPR012902|IPR013545 Bacterial general secretion pathway protein G-type pilin|General secretion pathway protein G|Prokaryotic N-terminal methylation site|Type II secretion system protein G GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.700.10|PF08334|PF13544|PR00813|PS00409|SSF54523|TIGR01710|TIGR02532 ALFP_RS13815 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000644|IPR007065|IPR013785 Aldolase-type TIM barrel|CBS domain|HPP GO:0003824 G3DSA:3.20.20.70|PF00571|PF04982|SM00116|SSF54631 ALFP_RS13820 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004360|IPR005956|IPR029068 4-hydroxyphenylpyruvate dioxygenase|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0003868|GO:0009072|GO:0016701|GO:0055114 G3DSA:3.10.180.10|PF00903|PF14696|PIRSF009283|SSF54593|TIGR01263 ALFP_RS13825 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 ALFP_RS13830 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000362|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083 Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0006099|GO:0016829 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF10415|PR00149|PS00163|SSF48557 ALFP_RS13835 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|SM00347|SSF46785 ALFP_RS13840 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021332 Protein of unknown function DUF2944 PF11161 ALFP_RS13845 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000086|IPR015797|IPR020084|IPR029401 NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|Nudix hydrolase, N-terminal GO:0016787 G3DSA:2.20.70.10|G3DSA:3.90.79.10|PF00293|PF14803|PS00893|SSF55811 ALFP_RS13850 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004616|IPR016181 Acyl-CoA N-acyltransferase|Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MF_00688|PF03588|SSF55729|TIGR00667 ALFP_RS13855 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007471|IPR007472|IPR016181|IPR017138 Acyl-CoA N-acyltransferase|Arginine-tRNA-protein transferase, C-terminal|Arginine-tRNA-protein transferase, N-terminal|Putative arginyl-tRNA--protein transferase, prokaryotic GO:0004057|GO:0016598 MF_00689|PF04376|PF04377|PIRSF037208|SSF55729 ALFP_RS13860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001295|IPR005719|IPR005720|IPR012135|IPR013785 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain|Dihydroorotate dehydrogenase, class 1/ 2|Dihydroorotate dehydrogenase, class 2|Dihydroorotate dehydrogenase, conserved site GO:0003824|GO:0004152|GO:0005737|GO:0006207|GO:0006222|GO:0016020|GO:0016627|GO:0055114 G3DSA:3.20.20.70|MF_00225|PF01180|PIRSF000164|PS00911|PS00912|SSF51395|TIGR01036 ALFP_RS13865 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010127|IPR018968 Phasin|Phasin, subfamily 1 PF09361|TIGR01841 ALFP_RS13875 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 ALFP_RS13880 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001453 MoaB/Mog domain G3DSA:3.40.980.10|PF00994|SM00852|SSF53218 ALFP_RS13885 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic PF07264 ALFP_RS13890 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012336|IPR013766 Thioredoxin domain|Thioredoxin-like fold GO:0045454 G3DSA:3.40.30.10|PF00085|SSF52833 ALFP_RS13895 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PS00039|SM00487|SM00490|SSF52540 ALFP_RS13900 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008407 Branched-chain amino acid transport, AzlD PF05437 ALFP_RS13905 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011606 Branched-chain amino acid transport, permease PF03591 ALFP_RS13910 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR019401 Zinc finger, CHCC-type G3DSA:2.60.260.40|PF10276 ALFP_RS13915 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000073|IPR012020|IPR029058 AB hydrolase 4 family|Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PIRSF005211|SSF53474 ALFP_RS13920 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001915|IPR011990 Peptidase M48|Tetratricopeptide-like helical domain GO:0004222|GO:0005515|GO:0006508 G3DSA:1.25.40.10|G3DSA:3.30.2010.10|PF01435|PF14559|SSF48452 ALFP_RS13925 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related PF09678 ALFP_RS13940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002938|IPR010971|IPR018168|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain|Ubiquinone biosynthesis hydroxylase UbiH/COQ6|Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0006744|GO:0016491|GO:0016709|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PS01304|SSF51905|TIGR01988 ALFP_RS13945 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001269|IPR004652|IPR013785|IPR018517|IPR024036|IPR032887 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase B|tRNA-dihydrouridine synthase, TIM-barrel, NifR3|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine synthase, putative, C-terminal GO:0002943|GO:0003824|GO:0008033|GO:0016491|GO:0017150|GO:0050660|GO:0055114 G3DSA:1.10.1200.80|G3DSA:3.20.20.70|MF_02042|PF01207|PIRSF006621|PS01136|SSF51395|TIGR00737 ALFP_RS13950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002197|IPR005412|IPR009057 DNA binding HTH domain, Fis-type|DNA-binding protein Fis|Homeodomain-like GO:0003677|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF02954|PIRSF002097|PR01590|SSF46689 ALFP_RS13955 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002695|IPR011607|IPR016193|IPR024051 AICAR transformylase domain|AICARFT/IMPCHase bienzyme|Cytidine deaminase-like|Methylglyoxal synthase-like domain GO:0003824|GO:0003937|GO:0004643|GO:0006164 G3DSA:3.40.140.20|G3DSA:3.40.50.1380|MF_00139|PF01808|PF02142|PIRSF000414|SM00798|SM00851|SSF52335|SSF53927|TIGR00355 ALFP_RS13960 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002176|IPR012337|IPR020563 Crossover junction endodeoxyribonuclease RuvC|Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site|Ribonuclease H-like domain GO:0003676|GO:0004520|GO:0006281|GO:0006310|GO:0008821 G3DSA:3.30.420.10|MF_00034|PF02075|PR00696|PS01321|SSF53098|TIGR00228 ALFP_RS13965 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000085|IPR003583|IPR010994|IPR011114|IPR012340|IPR013849 Bacterial DNA recombination protein RuvA|DNA helicase, Holliday junction RuvA type, domain I, bacterial|DNA helicase, Holliday junction RuvA type, domain III, C-terminal|Helix-hairpin-helix DNA-binding motif, class 1|Nucleic acid-binding, OB-fold|RuvA domain 2-like GO:0003677|GO:0003678|GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 G3DSA:1.10.150.20|G3DSA:1.10.8.10|G3DSA:2.40.50.140|MF_00031|PF01330|PF07499|PF14520|SM00278|SSF46929|SSF47781|SSF50249|TIGR00084 ALFP_RS13970 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001926|IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase|Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|PF00291|PIRSF006278|SSF53686 ALFP_RS13975 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003593|IPR004605|IPR008823|IPR008824|IPR011991|IPR027417 AAA+ ATPase domain|DNA helicase, Holliday junction RuvB type|DNA helicase, Holliday junction RuvB type, C-terminal|Holliday junction DNA helicase ruvB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 G3DSA:1.10.10.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00016|PD005323|PF05491|PF05496|SM00382|SSF46785|SSF52540|TIGR00635 ALFP_RS13985 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002195|IPR004721|IPR006680|IPR032466 Amidohydrolase-related|Dihydroorotase homodimeric type|Dihydroorotase, conserved site|Metal-dependent hydrolase GO:0004151|GO:0016787|GO:0016812|GO:0019856 G3DSA:3.20.20.140|MF_00219|PF01979|PIRSF001237|PS00482|PS00483|SSF51556|TIGR00856 ALFP_RS13990 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003121|IPR019835 SWIB domain|SWIB/MDM2 domain GO:0005515 G3DSA:1.10.245.10|PF02201|SM00151|SSF47592 ALFP_RS13995 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002081|IPR005101|IPR006050|IPR014729|IPR018394 Cryptochrome/DNA photolyase class 1|Cryptochrome/DNA photolyase class 1, conserved site, C-terminal|Cryptochrome/DNA photolyase, FAD-binding domain|DNA photolyase, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:1.10.579.10|G3DSA:1.25.40.80|G3DSA:3.40.50.620|PF00875|PF03441|PR00147|PS00394|PS00691|SSF48173|SSF52425 ALFP_RS14040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 ALFP_RS14045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007272 Sulphur transport domain PF04143 ALFP_RS14055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 G3DSA:3.30.1060.10|MF_01401|PF01625|SSF55068|TIGR00401 ALFP_RS14060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002324|IPR009056 Cytochrome c, class ID|Cytochrome c-like domain GO:0005506|GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|PR00606|SSF46626 ALFP_RS14065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 MF_01147|PF01790|PS01311|TIGR00544 ALFP_RS14075 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007838 Cell division protein ZapA-like PF05164|SSF102829 ALFP_RS14085 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009936 Protein of unknown function DUF1468 PF07331 ALFP_RS14090 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002823 Protein of unknown function DUF112, transmembrane PF01970 ALFP_RS14095 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS14100 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 ALFP_RS14105 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic G3DSA:3.40.190.10|PF13343|SSF53850 ALFP_RS14110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002204|IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PS00895|SSF48179|SSF51735 ALFP_RS14115 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003594|IPR003661|IPR004358|IPR013727 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Two-component sensor kinase, N-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PF08521|PR00344|SM00387|SM00388|SSF47384|SSF55874 ALFP_RS14120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 ALFP_RS14125 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000086|IPR015797|IPR020084|IPR020476|IPR022927 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|RNA pyrophosphohydrolase RppH GO:0016787 G3DSA:3.90.79.10|MF_00298|PF00293|PR00502|PS00893|SSF55811 ALFP_RS14130 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002314|IPR002316|IPR004154|IPR004500|IPR007214|IPR023717 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Proline-tRNA ligase, class IIa|Prolyl-tRNA synthetase, class IIa, bacterial-type|Prolyl-tRNA synthetase, class IIa, type 1|YbaK/aminoacyl-tRNA synthetase-associated domain GO:0000166|GO:0002161|GO:0004812|GO:0004827|GO:0005524|GO:0005737|GO:0006418|GO:0006433 G3DSA:3.30.930.10|G3DSA:3.40.50.800|G3DSA:3.90.960.10|MF_01569|PF00587|PF03129|PF04073|PIRSF001535|PR01046|SSF52954|SSF55681|SSF55826|TIGR00409 ALFP_RS14135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006683|IPR006684|IPR014166|IPR029069 Acyl-CoA thioester hydrolase YbgC/YbaW family|HotDog domain|Thioesterase domain|Tol-Pal system-associated acyl-CoA thioesterase GO:0016787|GO:0016790 G3DSA:3.10.129.10|PF03061|PIRSF003230|SSF54637|TIGR00051|TIGR02799 ALFP_RS14140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002898|IPR014163 MotA/TolQ/ExbB proton channel|Tol-Pal system, TolQ GO:0006810|GO:0008565|GO:0015031|GO:0016020|GO:0016021 PF01618|TIGR02796 ALFP_RS14145 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003400|IPR014168 Biopolymer transport protein ExbD/TolR|Biopolymer transport, TolR GO:0005215|GO:0006810|GO:0015031|GO:0016020|GO:0016021 PF02472|TIGR02801 ALFP_RS14150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006260|IPR014161 Tol-Pal system, TolA|TonB, C-terminal GO:0005215|GO:0006810|GO:0016020 G3DSA:3.30.1150.10|PF13103|SSF74653|TIGR01352|TIGR02794 ALFP_RS14155 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007195|IPR011659|IPR014167|IPR015943 Tol-Pal system beta propeller repeat-containing protein, TolB|TolB, N-terminal|WD40-like Beta Propeller|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0015031|GO:0017038|GO:0042597 G3DSA:2.130.10.10|G3DSA:3.40.50.10070|MF_00671|PF04052|PF07676|SSF52964|SSF69304|TIGR02800 ALFP_RS14160 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006664|IPR006665|IPR014169 OmpA-like domain|Outer membrane protein, bacterial|Peptidoglycan-associated lipoprotein GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|SSF103088|TIGR02802 ALFP_RS14165 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011990|IPR014162 Tetratricopeptide-like helical domain|Tol-Pal system, YbgF GO:0005515 G3DSA:1.25.40.10|PF13525|SSF48452|TIGR02795 ALFP_RS14170 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 ALFP_RS14175 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007410 DR1885-like metal-binding protein PF04314|SSF110087 ALFP_RS14180 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637 ALFP_RS14185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|TIGR00797 ALFP_RS14190 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 G3DSA:3.40.50.2300|PF02608 ALFP_RS14195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS14200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS14205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS14210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000612 Proteolipid membrane potential modulator GO:0016021 PF01679 ALFP_RS14215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010190|IPR016040|IPR032094 Diaminopimelate dehydrogenase, Ddh|Meso-diaminopimelate D-dehydrogenase, C-terminal|NAD(P)-binding domain GO:0009089|GO:0047850 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF16654|PIRSF025648|SSF51735|SSF55347|TIGR01921 ALFP_RS14220 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PIRSF006324 ALFP_RS14225 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003702|IPR017821|IPR026888 Acetyl-CoA hydrolase/transferase|Acetyl-CoA hydrolase/transferase C-terminal domain|Succinate CoA transferase GO:0003824|GO:0006084|GO:0016740 G3DSA:3.40.1080.10|G3DSA:3.40.810.20|PF02550|PF13336|SSF100950|TIGR03458 ALFP_RS14230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS14235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000103|IPR008255|IPR012081|IPR012336|IPR023753 Alkyl hydroperoxide reductase subunit F|FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin-like fold GO:0000302|GO:0008785|GO:0016491|GO:0016651|GO:0050660|GO:0051287|GO:0055114 G3DSA:3.40.30.10|G3DSA:3.50.50.60|PF07992|PF13192|PIRSF000238|PR00368|PR00469|PS00573|SSF51905|SSF52833|TIGR03140 ALFP_RS14240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000866|IPR012336|IPR017559|IPR019479|IPR024706 Alkyl hydroperoxide reductase subunit C|Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Peroxiredoxin, C-terminal|Thioredoxin-like fold GO:0006979|GO:0016209|GO:0016491|GO:0051920|GO:0055114 G3DSA:3.40.30.10|PF00578|PF10417|PIRSF000239|SSF52833|TIGR03137 ALFP_RS14245 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|PF00155|PF00392|SM00345|SSF46785|SSF53383 ALFP_RS14250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS14255 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002500|IPR004511|IPR011798|IPR014729 Adenosine 5'-phosphosulphate reductase|Phosphoadenosine phosphosulphate reductase|Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004604|GO:0008152|GO:0019344|GO:0019379|GO:0055114 G3DSA:3.40.50.620|PF01507|PIRSF000857|SSF52402|TIGR02055 ALFP_RS14260 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002500|IPR011784|IPR014729 Phosphoadenosine phosphosulphate reductase|Rossmann-like alpha/beta/alpha sandwich fold|Sulphate adenylyltransferase, small subunit GO:0003824|GO:0004781|GO:0008152|GO:0019419 G3DSA:3.40.50.620|PF01507|PIRSF002936|SSF52402|TIGR02039 ALFP_RS14265 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000795|IPR009000|IPR009001|IPR011779|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Sulphate adenylyltransferase, large subunit|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation protein, beta-barrel domain GO:0003924|GO:0005525|GO:0006790 G3DSA:2.40.30.10|G3DSA:3.40.50.300|PF00009|PR00315|PS00301|SSF50447|SSF50465|SSF52540|TIGR02034 ALFP_RS14270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002293|IPR004840|IPR004841 Amino acid permease, conserved site|Amino acid permease/ SLC12A domain|Amino acid/polyamine transporter I GO:0003333|GO:0006810|GO:0006865|GO:0015171|GO:0016020|GO:0016021|GO:0055085 PF00324|PIRSF006060|PS00218 ALFP_RS14275 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015590|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00687|SSF53720 ALFP_RS14280 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|PR00411|SSF51905 ALFP_RS14285 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009770 Domain of unknown function DUF1338 PF07063|SM01150 ALFP_RS14290 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS14295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000890|IPR004372|IPR023865 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|PF00871|PIRSF000722|PR00471|PS01075|PS01076|SSF53067|TIGR00016 ALFP_RS14300 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002505|IPR012147 Phosphate acetyl/butaryl transferase|Phosphate acetyl/butyryltransferase GO:0008152|GO:0016746 G3DSA:3.40.50.10750|PF01515|PIRSF000428|SSF53659 ALFP_RS14305 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009783|IPR032710 NTF2-like domain|Protein of unknown function DUF1348 G3DSA:3.10.450.50|PF07080|SSF54427 ALFP_RS14310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS14315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003829|IPR011051|IPR012093|IPR014710 Pirin|Pirin, N-terminal domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF02678|PIRSF006232|SSF51182 ALFP_RS14320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 ALFP_RS14325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|SM00267|SSF55073|TIGR00254 ALFP_RS14330 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR020556|IPR023631 Amidase signature domain|Amidase, conserved site G3DSA:3.90.1300.10|PF01425|PS00571|SSF75304 ALFP_RS14335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic SSF160379 ALFP_RS14340 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006748|IPR011009 Aminoglycoside/hydroxyurea antibiotic resistance kinase|Protein kinase-like domain GO:0006468|GO:0016773|GO:0019748 G3DSA:3.90.1200.10|PF04655|SSF56112 ALFP_RS14345 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011032|IPR018369|IPR020818 Chaperonin GroES, conserved site|GroES chaperonin family|GroES-like GO:0005524|GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|SM00883|SSF50129 ALFP_RS14350 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|SSF48592|SSF52029|SSF54849|TIGR02348 ALFP_RS14355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 G3DSA:1.10.3830.10|PF01219 ALFP_RS14360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001754|IPR011060|IPR011995|IPR013785|IPR018089 Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase domain|Orotidine 5'-phosphate decarboxylase, active site|Orotidine 5'-phosphate decarboxylase, type 2|Ribulose-phosphate binding barrel GO:0003824|GO:0004590|GO:0006207|GO:0006221|GO:0008152 G3DSA:3.20.20.70|MF_01215|PF00215|PS00156|SM00934|SSF51366|TIGR02127 ALFP_RS14365 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 ALFP_RS14370 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS14375 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 ALFP_RS14380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008136 CinA, C-terminal G3DSA:3.90.950.20|PF02464|SSF142433|TIGR00199 ALFP_RS14385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007686|IPR026037 Phosphatidylglycerophosphatase A|YutG/PgpA domain GO:0006629|GO:0008962 PF04608|PIRSF006162|SSF101307 ALFP_RS14390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006283|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|PurM-like, N-terminal domain|Thiamine-monophosphate kinase GO:0009030|GO:0009228 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_02128|PF00586|PF02769|PIRSF005303|SSF55326|SSF56042|TIGR01379 ALFP_RS14395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006027|IPR011605 NusB antitermination factor|NusB/RsmB/TIM44 GO:0003723|GO:0006353|GO:0006355 G3DSA:1.10.940.10|MF_00073|PF01029|SSF48013|TIGR01951 ALFP_RS14400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 G3DSA:3.40.50.960|MF_00178|PF00885|SSF52121|TIGR00114 ALFP_RS14405 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000422|IPR017945|IPR032677 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB|DHBP synthase RibB-like alpha/beta domain|GTP cyclohydrolase II GO:0008686|GO:0009231 G3DSA:3.90.870.10|MF_00180|PF00925|PF00926|PIRSF001259|SSF142695|SSF55821|TIGR00506 ALFP_RS14410 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 ALFP_RS14415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007899|IPR023577|IPR033469 CHAD domain|CYTH domain|CYTH-like domain G3DSA:2.40.320.10|PD009560|PF01928|PF05235|SM00880|SM01118|SSF55154 ALFP_RS14420 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000897|IPR003593|IPR004390|IPR013822|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, helical bundle|Signal-recognition particle receptor FtsY GO:0005525|GO:0006614 G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00920|PF00448|PF02881|SM00382|SM00962|SM00963|SSF47364|SSF52540|TIGR00064 ALFP_RS14425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002052|IPR004398|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|RNA methyltransferase, RsmD|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0031167|GO:0032259 G3DSA:3.40.50.150|PF03602|PIRSF004553|PS00092|SSF53335|TIGR00095 ALFP_RS14430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001980|IPR004821|IPR014729 Coenzyme A biosynthesis protein|Cytidyltransferase-like domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004595|GO:0009058|GO:0015937 G3DSA:3.40.50.620|MF_00151|PD016147|PF01467|PR01020|SSF52374|TIGR00125|TIGR01510 ALFP_RS14435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF00037|PS00198|SSF54862 ALFP_RS14440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005303 MOSC, N-terminal beta barrel PF03476|SSF141673 ALFP_RS14445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007844 AsmA PF05170 ALFP_RS14450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000277|IPR006235|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-acetylhomoserine/O-acetylserine sulfhydrylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0016765|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|SSF53383|TIGR01326 ALFP_RS14455 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009282|IPR027405 Protein of unknown function DUF937|YidB-like G3DSA:1.10.10.690|PF06078|SSF140804 ALFP_RS14460 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003462|IPR016040|IPR023401 NAD(P)-binding domain|Ornithine cyclodeaminase, N-terminal|Ornithine cyclodeaminase/mu-crystallin G3DSA:3.30.1780.10|G3DSA:3.40.50.720|PF02423|PIRSF001439|SSF51735 ALFP_RS14465 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009875|IPR009926|IPR012349|IPR023787 FMN-binding split barrel|PilZ domain|Type III secretion system flagellar brake protein YcgR|Type III secretion system flagellar brake protein YcgR, N-terminal GO:0010181|GO:0016491|GO:0035438|GO:0055114|GO:0071945 G3DSA:2.30.110.10|G3DSA:2.40.10.220|MF_01457|PF07238|PF07317 ALFP_RS14470 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025877|IPR029044 MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF12804|SSF53448 ALFP_RS14475 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005546|IPR011050 Autotransporter beta-domain|Pectin lyase fold/virulence factor G3DSA:2.40.128.130|PF03797|SM00869|SSF103515|SSF51126 ALFP_RS14480 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 ALFP_RS14485 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic SSF144052 ALFP_RS14490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|SSF53474 ALFP_RS14495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000674|IPR008274|IPR012368 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Oxidoreductase molybdopterin-binding subunit, IorB-related GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF02738|PIRSF036389|SM01008|SSF54665|SSF56003 ALFP_RS14500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|SSF47741|SSF54292 ALFP_RS14505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000674|IPR008274|IPR009056 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Cytochrome c-like domain GO:0009055|GO:0016491|GO:0020037|GO:0055114 G3DSA:1.10.760.10|G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF00034|PF13442|SM01008|SSF46626|SSF56003 ALFP_RS14510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010323|IPR011990 Protein of unknown function DUF924|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.20.58.320|G3DSA:1.25.40.10|PF06041|SSF48452 ALFP_RS14515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS14520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 ALFP_RS14525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS14530 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 ALFP_RS14535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029022 ABC transporter, BtuC-like G3DSA:1.10.3470.10 ALFP_RS14540 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002692|IPR014395|IPR023343|IPR029055 Nucleophile aminohydrolases, N-terminal|Penicillin acylase|Penicillin amidase type, domain1|Penicillin/cephalosporin acylase GO:0016787|GO:0016811|GO:0017000 G3DSA:1.10.287.150|G3DSA:1.10.439.10|G3DSA:2.30.120.10|G3DSA:3.60.20.10|PF01804|PIRSF001227|SSF56235 ALFP_RS14545 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|SM00267|SSF55073|TIGR00254 ALFP_RS14550 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS14555 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000917|IPR017849|IPR017850|IPR032506 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Domain of unknown function DUF4976|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|PF16347|SSF53649 ALFP_RS14560 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS14570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS14575 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001279|IPR013471 Metallo-beta-lactamase|Ribonuclease Z/BN GO:0016891|GO:0042779 G3DSA:3.60.15.10|MF_01818|PF12706|SM00849|SSF56281 ALFP_RS14580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR011663|IPR011991|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|SM00345|SM00866|SSF46785|SSF64288 ALFP_RS14585 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005158|IPR011990|IPR011991|IPR016032|IPR027417 Bacterial transcriptional activator domain|P-loop containing nucleoside triphosphate hydrolase|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.300|PF03704|PF13191|SM01043|SSF46894|SSF48452|SSF52540 ALFP_RS14590 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001736|IPR025202 Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824 G3DSA:3.30.870.10|PF13091|SM00155|SSF56024 ALFP_RS14595 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS14600 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000631|IPR004443|IPR017953|IPR029056|IPR030677 ATP-dependent (S)-NAD(P)H-hydrate dehydratase|Bifunctional NAD(P)H-hydrate repair enzyme Nnr|Carbohydrate kinase, predicted, conserved site|Ribokinase-like|YjeF N-terminal domain GO:0052855 G3DSA:3.40.1190.20|G3DSA:3.40.50.10260|MF_01965|MF_01966|PF01256|PF03853|PIRSF017184|PS01050|SSF53613|SSF64153|TIGR00196|TIGR00197 ALFP_RS14605 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003777|IPR016040|IPR027051 NAD(P)-binding domain|XdhC Rossmann domain|XdhC- CoxI G3DSA:3.40.50.720|PF02625|PF13478 ALFP_RS14610 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PF06808 ALFP_RS14615 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 ALFP_RS14620 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS14625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS14630 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 ALFP_RS14635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR002888|IPR006058|IPR010419|IPR012675|IPR023393 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Carbon monoxide dehydrogenase subunit G|START-like domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|G3DSA:3.30.530.20|PF00111|PF01799|PF06240|PS00197|SSF47741|SSF54292|SSF55961 ALFP_RS14640 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|SSF55447|SSF56176 ALFP_RS14645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|SM01008|SSF54665|SSF56003 ALFP_RS14650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018389|IPR026289 Solute binding protein, mannitol/chloroaromatic system-like|TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PIRSF039026 ALFP_RS14655 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|SSF50022 ALFP_RS14660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004099|IPR016156|IPR023753|IPR028202 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain|Reductase, C-terminal GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF07992|PF14759|PR00368|PR00411|SSF51905|SSF55424 ALFP_RS14665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001663|IPR015879|IPR015881|IPR017941 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site|Aromatic-ring-hydroxylating dioxygenase, alpha subunit|Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0006725|GO:0016491|GO:0016705|GO:0016708|GO:0019439|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|PR00090|PS00570|SSF50022|SSF55961 ALFP_RS14670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000391|IPR032710 NTF2-like domain|Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 G3DSA:3.10.450.50|PF00866|SSF54427 ALFP_RS14675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 ALFP_RS14680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 ALFP_RS14685 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic SSF144052 ALFP_RS14690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 ALFP_RS14695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 ALFP_RS14700 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|SM00347|SSF46785 ALFP_RS14705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 ALFP_RS14710 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000522|IPR029022 ABC transporter, BtuC-like|ABC transporter, FecCD-like GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|SSF81345 ALFP_RS14715 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|SSF53807 ALFP_RS14720 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 ALFP_RS14725 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006160 Short chain fatty acid transporter AtoE PF02667 ALFP_RS14730 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS14735 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 ALFP_RS14740 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|SSF53850 ALFP_RS14750 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006054|IPR006309|IPR012337|IPR013520 DNA polymerase 3, epsilon subunit|DNA polymerase III, epsilon subunit|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003887|GO:0006260 G3DSA:3.30.420.10|PF00929|SM00479|SSF53098|TIGR00573|TIGR01406 ALFP_RS14755 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 ALFP_RS14760 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 ALFP_RS14765 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002156|IPR012337|IPR022892 Ribonuclease H|Ribonuclease H domain|Ribonuclease H-like domain GO:0003676|GO:0004523 G3DSA:3.30.420.10|MF_00042|PF00075|SSF53098 ALFP_RS14770 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 ALFP_RS14775 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001279|IPR017782|IPR032282 Hydroxyacylglutathione hydrolase|Hydroxyacylglutathione hydrolase, C-terminal domain|Metallo-beta-lactamase GO:0004416|GO:0019243 G3DSA:3.60.15.10|MF_01374|PF00753|PF16123|PIRSF005457|SM00849|SSF56281|TIGR03413 ALFP_RS14780 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000189|IPR008258|IPR018392|IPR023346 LysM domain|Lysozyme-like domain|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0008933|GO:0016020 G3DSA:1.10.530.10|G3DSA:3.10.350.10|PF01464|PF01476|PS00922|SM00257|SSF53955|SSF54106 ALFP_RS14785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR014358|IPR016040 Enoyl-[acyl-carrier-protein] reductase (NADH)|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR GO:0004318|GO:0006633|GO:0055114 G3DSA:3.40.50.720|PF13561|PIRSF000094|PR00081|SSF51735 ALFP_RS14790 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS14795 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic G3DSA:3.40.190.10|SSF53850 ALFP_RS14800 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PF03450|SM01092|SSF55447|SSF56176 ALFP_RS14805 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|SSF47741|SSF54292 ALFP_RS14810 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|SM01008|SSF54665|SSF56003 ALFP_RS14815 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010419|IPR023393 Carbon monoxide dehydrogenase subunit G|START-like domain G3DSA:3.30.530.20|PF06240|SSF55961 ALFP_RS14820 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PS01117|SM00347|SSF46785 ALFP_RS14825 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PS00675|PS00688|SM00382|SM00448|SSF46689|SSF52172|SSF52540 ALFP_RS14830 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003594|IPR003661|IPR004358|IPR017055|IPR029151|IPR033479 Double Cache domain 1|Histidine kinase-like ATPase, C-terminal domain|Periplasmic sensor domain-like|Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator)|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF02743|PIRSF036431|PR00344|SM00387|SM00388|SSF103190|SSF47384|SSF55874 ALFP_RS14835 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001991|IPR018107|IPR023954 C4-dicarboxylate transport protein|Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter, conserved site GO:0006835|GO:0015293|GO:0016021 G3DSA:1.10.3860.10|MF_01300|PF00375|PR00173|PS00713|PS00714|SSF118215 ALFP_RS14840 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13410|PF13417|SSF47616|SSF52833 ALFP_RS14845 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001763|IPR020936 Rhodanese-like domain|Uncharacterised protein family UPF0176 G3DSA:3.40.250.10|MF_00469|PF00581|SM00450|SSF52821 ALFP_RS14850 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007404 LexA-binding, inner membrane-associated putative hydrolase PF04307 ALFP_RS14855 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR024291 Protein of unknown function DUF3829 PF12889 ALFP_RS14860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025433 Domain of unknown function DUF4168 PF13767 ALFP_RS14865 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007332|IPR012336 Protein of unknown function DUF411|Thioredoxin-like fold G3DSA:3.40.30.10|PF04214|SSF52833 ALFP_RS14870 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 G3DSA:3.90.960.10|PF04073|SSF55826 ALFP_RS14875 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002078|IPR003593|IPR025944|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, conserved site GO:0005524|GO:0006355|GO:0008134 G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PS00688|SM00382|SSF52540 ALFP_RS14880 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012347|IPR025419 Domain of unknown function DUF4142|Ferritin-related G3DSA:1.20.1260.10|PF13628 ALFP_RS14885 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000394|IPR007046|IPR007634 RNA polymerase sigma factor 54|RNA polymerase sigma factor 54, DNA-binding|RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PF00309|PF04552|PF04963|PIRSF000774|PR00045|PS00717|TIGR02395 ALFP_RS14890 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 G3DSA:3.40.50.2000|PF00982|SSF53756 ALFP_RS14895 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006685|IPR010920 LSM domain|Mechanosensitive ion channel MscS GO:0016020|GO:0055085 G3DSA:2.30.30.60|PF00924|SSF50182 ALFP_RS14900 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR019626 Stress-induced protein, KGG, repeat PF10685 ALFP_RS14905 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735 ALFP_RS14910 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003337|IPR006379|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IIB|Trehalose-phosphatase GO:0003824|GO:0005992 G3DSA:3.40.50.1000|PF02358|SSF56784|TIGR00685|TIGR01484 ALFP_RS14915 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021519 Protein of unknown function DUF3182 PF11379 ALFP_RS14920 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001375|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 G3DSA:3.40.50.1820|PF00326|SSF53474 ALFP_RS14925 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010300|IPR011051|IPR014710 Cysteine dioxygenase type I|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0005506|GO:0016702|GO:0055114 G3DSA:1.20.5.440|G3DSA:2.60.120.10|PF05995|SSF51182 ALFP_RS14930 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|SSF52096 ALFP_RS14935 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003781|IPR013816|IPR016040|IPR016102|IPR032875 ATP-grasp fold, subdomain 2|CoA-binding|NAD(P)-binding domain|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0005524|GO:0048037 G3DSA:3.30.470.20|G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF13380|PF13549|PF13607|SM00881|SSF51735|SSF52210|SSF56059 ALFP_RS14940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS14945 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011032|IPR013149|IPR013154|IPR014188|IPR016040|IPR020843 Acrylyl-CoA reductase AcuI|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735|TIGR02823 ALFP_RS14950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 ALFP_RS14955 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 ALFP_RS14960 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 ALFP_RS14965 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018912 Protein of unknown function DUF2478 PF10649 ALFP_RS14970 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002364|IPR011032|IPR013154|IPR014182|IPR016040|IPR020843 Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-binding type 1|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain|Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF08240|PF13602|PS01162|SM00829|SSF50129|SSF51735|TIGR02817 ALFP_RS14975 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001155|IPR013785 Aldolase-type TIM barrel|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00724|SSF51395 ALFP_RS14980 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS14985 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006323|IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2|Phosphonoacetaldehyde hydrolase GO:0008152|GO:0016787|GO:0019700|GO:0050194 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|MF_01375|PF13419|SSF56784|TIGR01422|TIGR01509 ALFP_RS14990 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001670|IPR017775|IPR018211 Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, phosphonate metabolism-associated|Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PS00913|SSF56796|TIGR03405 ALFP_RS14995 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR005769 ABC transporter type 1, transmembrane domain MetI-like|ABC transporter, permease PhnE/PtxC GO:0005887|GO:0006810|GO:0015604|GO:0015716|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01097 ALFP_RS15000 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR012693|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, phosphonate import, PhnC|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015416|GO:0015716|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR02315 ALFP_RS15005 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001638|IPR005770|IPR017797 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein|Phosphonate ABC transporter, periplasmic substrate-binding protein|Solute-binding protein family 3/N-terminal domain of MltF GO:0015604|GO:0015716|GO:0043190|GO:0055085 G3DSA:3.40.190.10|PF12974|SM00062|SSF53850|TIGR01098|TIGR03431 ALFP_RS15010 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS15015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 ALFP_RS15020 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR032466 Metal-dependent hydrolase G3DSA:3.20.20.140|SSF51556 ALFP_RS15025 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PIRSF006324 ALFP_RS15030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS15035 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001320|IPR001638 Ionotropic glutamate receptor|Solute-binding protein family 3/N-terminal domain of MltF GO:0004970|GO:0016020 G3DSA:1.10.287.70|G3DSA:3.40.190.10|PF00497|SM00062|SM00079|SSF53850 ALFP_RS15040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|SM00418|SSF46785 ALFP_RS15045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PF02040|PR00758|TIGR00935 ALFP_RS15050 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006659|IPR006660|IPR012336 Arsenate reductase|Arsenate reductase-like|Thioredoxin-like fold GO:0008794|GO:0055114 G3DSA:3.40.30.10|PF03960|SSF52833|TIGR00014 ALFP_RS15055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005025|IPR014063|IPR029039 Arsenate resistance ArsH|Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|SSF52218|TIGR02690 ALFP_RS15060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 ALFP_RS15065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003594|IPR003660|IPR003661|IPR004358|IPR013727 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Two-component sensor kinase, N-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PF08521|PR00344|SM00387|SM00388|SSF47384|SSF55874 ALFP_RS15070 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005220 Bacterial OB-fold G3DSA:2.40.50.200|PF04076|SSF101756 ALFP_RS15085 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001801|IPR027444 Histone-like protein H-NS|Histone-like protein H-NS, C-terminal domain GO:0003677|GO:0005622|GO:0006355 G3DSA:4.10.430.10|PF00816|SM00528|SSF81273 ALFP_RS15090 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009989 TrbM PF07424 ALFP_RS15095 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 ALFP_RS15105 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB PF05101 ALFP_RS15110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018145|IPR027417 CagE, TrbE, VirB component of type IV transporter system, central domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF03135|SSF52540 ALFP_RS15120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR014158|IPR023220 Type IV secretion system, VirB5|Type IV secretion system, VirB5-domain G3DSA:1.20.58.430|PF07996|SSF101082 ALFP_RS15125 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 PF04610 ALFP_RS15135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007430|IPR026264|IPR032710 Bacterial virulence protein VirB8|NTF2-like domain|Type IV secretion system protein VirB8/PtlE GO:0016020|GO:0030255 PF04335|PIRSF003299|SSF54427 ALFP_RS15140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010258 Conjugal transfer, TrbG/VirB9/CagX PF03524 ALFP_RS15145 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005498 Type IV secretion system, VirB10 / TraB / TrbI PF03743 ALFP_RS15150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001482|IPR014155|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Type II secretion system protein E|Type IV secretion system protein VirB11 GO:0005524|GO:0005737|GO:0006810|GO:0009405 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|SSF52540|TIGR02788 ALFP_RS15170 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 ALFP_RS15180 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR019476|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Type IV secretion system coupling protein TraD, DNA-binding domain G3DSA:1.10.8.80|G3DSA:3.40.50.300|PF10412|SSF52540 ALFP_RS15185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR014059|IPR014862|IPR027417 Conjugative relaxase, N-terminal|P-loop containing nucleoside triphosphate hydrolase|TrwC relaxase G3DSA:3.40.50.300|PF08751|PF13604|SSF52540|SSF55464|TIGR02686 ALFP_RS15195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001387|IPR010982|IPR013430 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|Toxin-antitoxin system, antidote protein, HigA GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SSF47413|TIGR02607 ALFP_RS15200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007711|IPR007712 Toxin HigB-1|Toxin-antitoxin system, RelE/ParE toxin family PF05015|SSF143011|TIGR02385 ALFP_RS15205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013538|IPR023393 Activator of Hsp90 ATPase homologue 1-like|START-like domain GO:0006950 G3DSA:3.30.530.20|PF08327|SSF55961 ALFP_RS15210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008775 Phytanoyl-CoA dioxygenase G3DSA:2.60.120.620|PF05721|SSF51197 ALFP_RS15215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 PF12974|SSF53850|TIGR01098 ALFP_RS15220 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR005769 ABC transporter type 1, transmembrane domain MetI-like|ABC transporter, permease PhnE/PtxC GO:0005887|GO:0006810|GO:0015604|GO:0015716|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01097 ALFP_RS15225 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR012693|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, phosphonate import, PhnC|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015416|GO:0015716|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR02315 ALFP_RS15230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006139|IPR006140|IPR016040|IPR029752|IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PS00671|SSF51735|SSF52283 ALFP_RS15235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS15240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|SSF53098 ALFP_RS15245 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010982|IPR031856 Lambda repressor-like, DNA-binding domain|Putative bacterial antitoxin YdaS GO:0003677 G3DSA:1.10.260.40|PF15943|SSF47413 ALFP_RS15250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002104|IPR004107|IPR011010|IPR013762|IPR022000|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Domain of unknown function (DUF3596)|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF12167|PF14659|SSF56349 ALFP_RS15260 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002125|IPR002734|IPR004794|IPR011549|IPR016192|IPR016193|IPR024072 APOBEC/CMP deaminase, zinc-binding|Bacterial bifunctional deaminase-reductase, C-terminal|Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like|Dihydrofolate reductase-like domain|Riboflavin biosynthesis protein RibD|Riboflavin-specific deaminase, C-terminal GO:0003824|GO:0008270|GO:0008703|GO:0008835|GO:0009231|GO:0016787|GO:0050661|GO:0055114 G3DSA:3.40.140.10|G3DSA:3.40.430.10|PF00383|PF01872|PIRSF006769|PS00903|SSF53597|SSF53927|TIGR00227|TIGR00326 ALFP_RS15265 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003796|IPR005144 ATP-cone domain|Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 MF_00440|PF03477|TIGR00244 ALFP_RS15270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001085|IPR015421|IPR015422|IPR015424|IPR019798 Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine hydroxymethyltransferase|Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0003824|GO:0004372|GO:0006544|GO:0006563|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00051|PF00464|PIRSF000412|PS00096|SSF53383 ALFP_RS15275 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005247|IPR008914 Phosphatidylethanolamine-binding protein|YbhB/YbcL G3DSA:3.90.280.10|PF01161|SSF49777|TIGR00481 ALFP_RS15280 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001412|IPR002305|IPR002307|IPR002942|IPR014729|IPR024108 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|RNA-binding S4 domain|Rossmann-like alpha/beta/alpha sandwich fold|Tyrosine-tRNA ligase|Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0000166|GO:0003723|GO:0004812|GO:0004831|GO:0005524|GO:0005737|GO:0006418|GO:0006437 G3DSA:1.10.240.10|G3DSA:3.10.290.10|G3DSA:3.40.50.620|MF_02007|PF00579|PF01479|PR01040|PS00178|SM00363|SSF52374|SSF55174|TIGR00234 ALFP_RS15285 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|SSF51261 ALFP_RS15290 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 G3DSA:3.30.420.40|MF_01270|PF03702|SSF53067 ALFP_RS15295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000361|IPR016092|IPR017870|IPR023063 FeS cluster biogenesis|FeS cluster insertion protein|FeS cluster insertion protein ErpA|FeS cluster insertion, C-terminal, conserved site GO:0005198|GO:0016226|GO:0051536 G3DSA:2.60.300.12|MF_01380|PF01521|PS01152|SSF89360|TIGR00049 ALFP_RS15305 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000534|IPR000706|IPR012280|IPR016040|IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site|N-acetyl-gamma-glutamyl-phosphate reductase, type 1|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0006526|GO:0008652|GO:0016620|GO:0046983|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00150|PF01118|PF02774|PS01224|SM00859|SSF51735|SSF55347|TIGR01850 ALFP_RS15310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000754|IPR014721|IPR020568|IPR020574|IPR023035 Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S9|Ribosomal protein S9, bacterial/plastid|Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.230.10|MF_00532_B|PF00380|PS00360|SSF54211 ALFP_RS15315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005822|IPR005823 Ribosomal protein L13|Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 G3DSA:3.90.1180.10|MF_01366|PF00572|PIRSF002181|SSF52161|TIGR01066 ALFP_RS15320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018389|IPR026289 Solute binding protein, mannitol/chloroaromatic system-like|TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PIRSF039026 ALFP_RS15325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 PF01523|SSF111283 ALFP_RS15330 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006839|IPR023153 PSPTO4464-like domain|Ribosome-associated, YjgA G3DSA:1.10.60.30|PF04751|PIRSF016183|SSF158710 ALFP_RS15335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003140|IPR029058 Alpha/Beta hydrolase fold|Phospholipase/carboxylesterase/thioesterase GO:0016787 G3DSA:3.40.50.1820|PF02230|SSF53474 ALFP_RS15340 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR016102|IPR016181|IPR032875 Acyl-CoA N-acyltransferase|GNAT domain|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0008080 G3DSA:3.40.50.261|G3DSA:3.40.630.30|PF00583|PF13549|PF13607|SSF52210|SSF55729 ALFP_RS15345 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001757|IPR004014|IPR006068|IPR006415|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299 Cation-transporting P-type ATPase, C-terminal|Cation-transporting P-type ATPase, N-terminal|HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IIIB GO:0000166|GO:0015444|GO:0015693|GO:0016021|GO:0046872 G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|PF00122|PF00689|PF00690|PF00702|PR01836|PS00154|SM00831|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01524 ALFP_RS15350 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.565.10|PF00512|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55874 ALFP_RS15355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 ALFP_RS15360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000924|IPR001412|IPR004527|IPR008925|IPR014729|IPR020058|IPR020061|IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2|Aminoacyl-tRNA synthetase, class I, conserved site|Glutamate-tRNA ligase, bacterial/mitochondrial|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000049|GO:0000166|GO:0004812|GO:0004818|GO:0005524|GO:0005737|GO:0006418|GO:0006424|GO:0016876|GO:0043039 G3DSA:1.10.10.350|G3DSA:1.10.1160.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00022_B|PF00749|PR00987|PS00178|SSF48163|SSF52374|TIGR00464 ALFP_RS15365 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 ALFP_RS15370 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 ALFP_RS15375 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006042|IPR006043|IPR017588 Uric acid permease UacT-like|Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0055085 PF00860|TIGR00801|TIGR03173 ALFP_RS15380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000073|IPR002410|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Peptidase S33 GO:0006508|GO:0008233 G3DSA:3.40.50.1820|PF00561|PR00111|PR00793|SSF53474 ALFP_RS15385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|SSF50022|SSF55961 ALFP_RS15390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 ALFP_RS15395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000951|IPR001041|IPR001433|IPR006058|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Oxidoreductase FAD/NAD(P)-binding|Phthalate dioxygenase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PR00409|PS00197|SSF52343|SSF54292|SSF63380 ALFP_RS15400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS15405 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009822|IPR011335 Restriction endonuclease type II-like|YaeQ G3DSA:3.10.640.10|PF07152|PIRSF011484|SM01322|SSF52980 ALFP_RS15415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13404|PR00033|SM00344|SSF46785|SSF54909 ALFP_RS15420 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002869|IPR019752|IPR029061 Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain|Thiamin diphosphate-binding fold GO:0016491|GO:0016903|GO:0055114 G3DSA:3.40.50.970|G3DSA:3.40.920.10|PF01558|SSF52518|SSF53323 ALFP_RS15425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009970 Histone H1-like nucleoprotein HC2 GO:0003677|GO:0030261 PF07382 ALFP_RS15430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003425 CCB3/YggT GO:0016020 PF02325 ALFP_RS15435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003265|IPR011257|IPR023170 DNA glycosylase|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003824|GO:0006281|GO:0006284 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|PF00730|SM00478|SSF48150 ALFP_RS15440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008816 Glycine zipper 2TM domain GO:0019867 PF05433 ALFP_RS15445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002173|IPR011611|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase-like GO:0016773 G3DSA:3.40.1190.20|PF00294|PS00583|SSF53613 ALFP_RS15450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011723|IPR021834 Protein of unknown function DUF3426|Zinc finger/thioredoxin putative PF11906|TIGR02098 ALFP_RS15455 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004498|IPR029063 Ribosomal protein L11 methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0006479|GO:0008276 G3DSA:3.40.50.150|MF_00735|PF06325|PIRSF000401|SSF53335|TIGR00406 ALFP_RS15460 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004549|IPR005479|IPR005481|IPR005482|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Acetyl-CoA carboxylase, biotin carboxylase|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0005524|GO:0016874 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF02785|PF02786|PS00866|PS00867|SM00878|SSF51246|SSF52440|SSF56059|TIGR00514 ALFP_RS15465 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000089|IPR001249|IPR001882|IPR011053 Acetyl-CoA biotin carboxyl carrier|Biotin-binding site|Biotin/lipoyl attachment|Single hybrid motif GO:0003989|GO:0006633|GO:0009317 G3DSA:2.40.50.100|PF00364|PR01071|PS00188|SSF51230|TIGR00531 ALFP_RS15470 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001874|IPR018509 Dehydroquinase, class II|Dehydroquinase, class II, conserved site GO:0003855 G3DSA:3.40.50.9100|MF_00169|PD004527|PF01220|PIRSF001399|PS01029|SSF52304|TIGR01088 ALFP_RS15475 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000866|IPR012336|IPR017937 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin, conserved site|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0045454|GO:0055114 G3DSA:3.40.30.10|PF00578|PS00194|SSF52833 ALFP_RS15480 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000713|IPR004101|IPR005757|IPR013221|IPR016040 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|Murein peptide ligase|NAD(P)-binding domain GO:0005524|GO:0009058|GO:0009252|GO:0016874|GO:0016881|GO:0071555 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_02020|PF01225|PF02875|PF08245|SSF51984|SSF53244|SSF53623|TIGR01081 ALFP_RS15485 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008886|IPR029058 Alpha/Beta hydrolase fold|Uncharacterised protein family UPF0227/Esterase YqiA G3DSA:3.40.50.1820|PF05728|SSF53474 ALFP_RS15490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012340 Nucleic acid-binding, OB-fold PF00773|SM00955|SSF50249 ALFP_RS15495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF13103|SSF74653|TIGR01352 ALFP_RS15500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006151|IPR011342|IPR013708|IPR016040|IPR022893 NAD(P)-binding domain|Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase|Shikimate dehydrogenase|Shikimate dehydrogenase family|Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0019632|GO:0050661|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_00222|PF01488|PF08501|SSF51735|SSF53223|TIGR00507 ALFP_RS15505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001264|IPR011812|IPR023346 Glycosyl transferase, family 51|Lysozyme-like domain|Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 G3DSA:1.10.3810.10|MF_00766|PF00912|SSF53955|TIGR02070 ALFP_RS15510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005495|IPR030923 LPS export ABC transporter permease LptG|Permease LptG/LptF-related GO:0016021|GO:0043190|GO:0055085 PF03739|TIGR04408 ALFP_RS15515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004617|IPR004843|IPR029052 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical)|Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0008803|GO:0016787 G3DSA:3.60.21.10|PF00149|PIRSF000903|SSF56300|TIGR00668 ALFP_RS15520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|SM00563|SSF69593 ALFP_RS15525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005227|IPR006641|IPR012337 Putative pre-16S rRNA nuclease|Ribonuclease H-like domain|YqgF/RNase H-like domain GO:0003676|GO:0006139|GO:0006364 G3DSA:3.30.420.140|MF_00651|PF03652|SM00732|SSF53098|TIGR00250 ALFP_RS15560 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PS01117|SM00347|SSF46785 ALFP_RS15565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002813|IPR016117 ArgJ-like domain|Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 G3DSA:3.60.70.12|MF_01106|PD004193|PF01960|SSF56266|TIGR00120 ALFP_RS15570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009760 Protein of unknown function DUF1328 GO:0005886 MF_01361|PF07043|PIRSF036466 ALFP_RS15575 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008462|IPR026042 CsbD-like|Stress response protein YjbJ G3DSA:1.10.1470.10|PF05532|PIRSF039008|SSF69047 ALFP_RS15580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001787|IPR018258|IPR028909 Ribosomal protein L21|Ribosomal protein L21, conserved site|Ribosomal protein L21-like GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_01363|PF00829|PS01169|SSF141091|TIGR00061 ALFP_RS15585 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001684|IPR018261 Ribosomal protein L27|Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.100|MF_00539|PD003114|PF01016|PR00063|PS00831|SSF110324|TIGR00062 ALFP_RS15590 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006073|IPR006074|IPR006169|IPR014100|IPR027417 GTP binding domain|GTP-binding protein Obg/CgtA|GTP1/OBG domain|GTP1/OBG, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0003924|GO:0005525 G3DSA:2.70.210.12|G3DSA:3.40.50.300|MF_01454|PF01018|PF01926|PIRSF002401|PR00326|PS00905|SSF52540|SSF82051|TIGR02729 ALFP_RS15595 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001048|IPR001057|IPR002478|IPR005715|IPR011529|IPR015947|IPR019797 Aspartate/glutamate/uridylate kinase|Glutamate 5-kinase|Glutamate 5-kinase, conserved site|Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase|Glutamate/acetylglutamate kinase|PUA domain|PUA-like domain GO:0003723|GO:0004349|GO:0005737|GO:0006561 G3DSA:2.30.130.10|G3DSA:3.40.1160.10|MF_00456|PF00696|PF01472|PIRSF000729|PR00474|PS00902|SM00359|SSF53633|SSF88697|TIGR01027 ALFP_RS15600 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006076|IPR016040|IPR023080|IPR023753 D-amino acid dehydrogenase DadA|FAD dependent oxidoreductase|FAD/NAD(P)-binding domain|NAD(P)-binding domain GO:0008718|GO:0016491|GO:0019478|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.40.50.720|MF_01202|PF01266|SSF51905|SSF54373 ALFP_RS15605 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00486|SM00862|SSF46894|SSF52172 ALFP_RS15610 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 ALFP_RS15615 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 ALFP_RS15620 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002817|IPR025747 Phosphomethylpyrimidine synthase|ThiC-associated domain GO:0009228|GO:0051536 MF_00089|PF01964|PF13667|TIGR00190 ALFP_RS15625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006664|IPR006665 OmpA-like domain|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PF13488|PR01021|PR01023|SSF103088 ALFP_RS15630 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS15635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 ALFP_RS15640 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 ALFP_RS15645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 ALFP_RS15650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001638|IPR018313 Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF00497|PS01039|SM00062|SSF53850 ALFP_RS15655 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS15660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003838|IPR004513 ABC transporter permease protein domain|Cell division protein FtsX GO:0007049|GO:0016020|GO:0016021 PF02687|PIRSF003097 ALFP_RS15665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003265|IPR005760|IPR011257|IPR015797|IPR023170|IPR029119 A/G-specific adenine glycosylase MutY|DNA glycosylase|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain|MutY, C-terminal|NUDIX hydrolase domain-like GO:0003824|GO:0006281|GO:0006284|GO:0016787|GO:0019104 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|G3DSA:3.90.79.10|PF00730|PF14815|SM00478|SSF48150|SSF55811|TIGR01084 ALFP_RS15670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001182|IPR011923|IPR018365 Cell cycle protein FtsW/RodA|Cell cycle, FtsW / RodA / SpoVE, conserved site|Rod shape-determining protein RodA GO:0007049|GO:0008360|GO:0016021|GO:0051301 PF01098|PS00428|TIGR02210 ALFP_RS15675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001460|IPR005311|IPR012338|IPR017790 Beta-lactamase/transpeptidase-like|Penicillin-binding protein 2|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658|GO:0016020 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|SSF56519|SSF56601|TIGR03423 ALFP_RS15680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 PF04093|TIGR03426 ALFP_RS15685 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007221 Rod shape-determining protein MreC GO:0008360 PF04085|PIRSF038471|TIGR00219 ALFP_RS15690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 G3DSA:3.30.420.40|G3DSA:3.90.640.10|PF06723|PR01652|SSF53067|TIGR00904 ALFP_RS15695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 MF_00122|PF02686|SSF141000|TIGR00135 ALFP_RS15700 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004412|IPR020556|IPR023631 Amidase signature domain|Amidase, conserved site|Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 G3DSA:3.90.1300.10|MF_00120|PF01425|PS00571|SSF75304|TIGR00132 ALFP_RS15705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003789|IPR004413|IPR006075|IPR017958|IPR018027|IPR023168 Asn/Gln amidotransferase|Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic|Aspartyl/glutamyl-tRNA amidotransferase subunit B-related|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit|Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016874|GO:0016884 G3DSA:1.10.10.410|MF_00121|PF02637|PF02934|PS01234|SM00845|SSF55931|SSF89095|TIGR00133 ALFP_RS15710 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000836|IPR004467|IPR023031|IPR029057 Orotate phosphoribosyl transferase domain|Orotate phosphoribosyltransferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004588|GO:0006221|GO:0009116 G3DSA:3.40.50.2020|MF_01208|PF00156|SSF53271|TIGR00336 ALFP_RS15715 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS15720 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR032808 DoxX family PF07681 ALFP_RS15725 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004183|IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type|Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0008270|GO:0016491|GO:0016701|GO:0055114 G3DSA:3.40.830.10|PF02900|PIRSF006157|SSF53213 ALFP_RS15730 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004808|IPR005135 AP endonuclease 1|Endonuclease/exonuclease/phosphatase GO:0004518|GO:0006281 G3DSA:3.60.10.10|PF03372|SSF56219|TIGR00195|TIGR00633 ALFP_RS15735 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002323|IPR009056 Cytochrome c, class IE|Cytochrome c-like domain GO:0005506|GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PR00607|SSF46626 ALFP_RS15740 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001117|IPR001287|IPR008972|IPR011707 Cupredoxin|Multicopper oxidase, type 1|Multicopper oxidase, type 3|Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0016491|GO:0050421|GO:0055114 G3DSA:2.60.40.420|PF00394|PF07732|PR00695|SSF49503|TIGR02376 ALFP_RS15745 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000883|IPR001991|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain|Sodium:dicarboxylate symporter GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0015293|GO:0016021|GO:0020037|GO:0055114 PF00115|PR00173|SSF81442 ALFP_RS15750 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002078|IPR002197|IPR003018|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417|IPR029016 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|GAF domain|GAF domain-like|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005515|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.40|G3DSA:3.40.50.300|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|SM00065|SM00382|SSF46689|SSF52540|SSF55781 ALFP_RS15755 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|SM00100|SM00419|SSF46785|SSF51206 ALFP_RS15760 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|SSF56436 ALFP_RS15765 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 PF03616|TIGR00210 ALFP_RS15770 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000092|IPR008949 Isoprenoid synthase domain|Polyprenyl synthetase GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|SSF48576 ALFP_RS15775 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008533|IPR027417 Domain of unknown function DUF815|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF05673|SSF52540 ALFP_RS15780 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000086|IPR003561|IPR003733|IPR013785|IPR015797|IPR020084|IPR020476|IPR022998 Aldolase-type TIM barrel|Mutator MutT|NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase GO:0003824|GO:0004789|GO:0006281|GO:0008413|GO:0009228|GO:0016787 G3DSA:3.20.20.70|G3DSA:3.90.79.10|PF00293|PF02581|PR00502|PS00893|SSF51391|SSF55811|TIGR00586 ALFP_RS15785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF01564|SSF53335 ALFP_RS15790 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|G3DSA:2.20.200.10|PF02321|SSF56954|TIGR01845 ALFP_RS15795 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 ALFP_RS15800 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 ALFP_RS15805 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF13437|PF13533|SSF111369|TIGR01730 ALFP_RS15810 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009777|IPR027462 Cell division protein ZapD|Z ring-associated protein D, C-terminal domain G3DSA:1.10.3900.10|G3DSA:2.60.440.10|MF_01092|PF07072|SSF160950 ALFP_RS15815 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001977|IPR027417 Dephospho-CoA kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004140|GO:0005524|GO:0015937 G3DSA:3.40.50.300|MF_00376|PF01121|SSF52540|TIGR00152 ALFP_RS15825 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|PS00622|SM00421|SSF46894 ALFP_RS15830 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003721|IPR014729 Pantoate-beta-alanine ligase|Rossmann-like alpha/beta/alpha sandwich fold GO:0004592|GO:0015940 G3DSA:3.30.1300.10|G3DSA:3.40.50.620|MF_00158|PF02569|SSF52374|TIGR00018 ALFP_RS15835 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003768 Segregation and condensation protein A MF_01805|PF02616 ALFP_RS15840 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021853 Protein of unknown function DUF3460 PF11943 ALFP_RS15845 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004638|IPR011701|IPR020846 Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473|TIGR00711 ALFP_RS15850 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 ALFP_RS15855 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000489|IPR003726|IPR003759|IPR004223|IPR006158|IPR011005|IPR011822 Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-binding module, cap domain|Cobalamin-dependent methionine synthase|Dihydropteroate synthase-like|Homocysteine-binding domain|Pterin-binding domain|Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419|GO:0042558|GO:0044237|GO:0046872 G3DSA:1.10.1240.10|G3DSA:3.10.196.10|G3DSA:3.20.20.20|G3DSA:3.20.20.330|G3DSA:3.40.50.280|PF00809|PF02310|PF02574|PF02607|PF02965|PIRSF000381|SM01018|SSF47644|SSF51717|SSF52242|SSF56507|SSF82282|TIGR02082 ALFP_RS15860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 ALFP_RS15865 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|SSF53807 ALFP_RS15870 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010105|IPR011662|IPR012910 Secretin/TonB, short N-terminal domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SM00965|SSF56935|TIGR01783 ALFP_RS15875 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006860|IPR012373|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal PF04773|PF16220|PIRSF018266 ALFP_RS15880 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 ALFP_RS15890 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004014|IPR008250|IPR023614 Cation-transporting P-type ATPase, N-terminal|P-type ATPase, A domain|Porin domain GO:0000166|GO:0046872 G3DSA:2.40.160.10|G3DSA:2.70.150.10|PF00122|PF00690|PF13609|SSF56935|SSF81653 ALFP_RS15895 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|PF01544|SSF144083 ALFP_RS15900 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|PF01544|SSF143865|SSF144083 ALFP_RS15910 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|PF01544|SSF144083 ALFP_RS15925 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008867|IPR013785 Aldolase-type TIM barrel|Thiazole biosynthesis GO:0003824|GO:0009228 G3DSA:3.20.20.70|MF_00443|PF05690|SSF110399 ALFP_RS15930 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004399|IPR013749|IPR029056 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase|Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Ribokinase-like GO:0008972|GO:0009228 G3DSA:3.40.1190.20|PF08543|SSF53613|TIGR00097 ALFP_RS15935 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000845|IPR010049 MTA/SAH nucleosidase|Nucleoside phosphorylase domain GO:0003824|GO:0008782|GO:0008930|GO:0009116|GO:0009164|GO:0019509 G3DSA:3.40.50.1580|PF01048|SSF53167|TIGR01704 ALFP_RS15940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF01135|SSF53335 ALFP_RS15945 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003423|IPR010130 Outer membrane efflux protein|Type I secretion outer membrane protein, TolC GO:0005215|GO:0006810|GO:0019867 G3DSA:1.20.1600.10|PF02321|SSF56954|TIGR01844 ALFP_RS15950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004821|IPR011914|IPR014729 Cytidyltransferase-like domain|RfaE bifunctional protein, domain II|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0005975|GO:0009058|GO:0016773|GO:0016779 G3DSA:3.40.50.620|PF01467|SSF52374|TIGR00125|TIGR02199 ALFP_RS15955 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009078|IPR012348 Ferritin-like superfamily|Ribonucleotide reductase-related GO:0016491|GO:0055114 G3DSA:1.10.620.20|SSF47240 ALFP_RS15960 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004147|IPR010232|IPR011009 Probable protein kinase UbiB|Protein kinase-like domain|UbiB domain GO:0006744 G3DSA:3.90.1200.10|PF03109|SSF56112|TIGR01982 ALFP_RS15965 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003033 SCP2 sterol-binding domain PF02036 ALFP_RS15970 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007379|IPR032710 NTF2-like domain|Tim44-like domain PF04280|SM00978|SSF54427 ALFP_RS15975 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004033|IPR023576|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|UbiE/COQ5 methyltransferase|UbiE/COQ5 methyltransferase, conserved site GO:0008168 G3DSA:3.40.50.150|MF_01813|PF01209|PS01183|PS01184|SSF53335|TIGR01934 ALFP_RS15980 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR001867|IPR011006|IPR011879|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000156|GO:0000160|GO:0003677|GO:0006355|GO:0006817 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172|TIGR02154 ALFP_RS15985 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR014310|IPR021766 Histidine kinase-like ATPase, C-terminal domain|PAS domain|Protein of unknown function DUF3329|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphate regulon sensor PhoR|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF11808|PR00344|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR02966 ALFP_RS15990 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 ALFP_RS15995 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003833|IPR010016|IPR024946|IPR029000 Arginine repressor C-terminal-like domain|Carboxyltransferase domain, subdomain C and D|Cyclophilin-like domain|KipI family G3DSA:2.40.100.10|G3DSA:3.30.1360.40|PF02682|SM00796|SSF160467|SSF50891|TIGR00370 ALFP_RS16000 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003778|IPR029000 Carboxyltransferase domain, subdomain A and B|Cyclophilin-like domain G3DSA:2.40.100.10|PF02626|SM00797|SSF50891|TIGR00724 ALFP_RS16005 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000634|IPR001721|IPR001926|IPR005787 ACT-like domain|Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Threonine dehydratase, biosynthetic|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004794|GO:0006520|GO:0009097|GO:0030170 G3DSA:3.40.1020.10|G3DSA:3.40.50.1100|PF00291|PF00585|PS00165|SSF53686|SSF55021|TIGR01124 ALFP_RS16010 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR032816 SNARE associated Golgi protein PF09335 ALFP_RS16015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004017|IPR004113|IPR006094|IPR009051|IPR016164|IPR016166|IPR016167|IPR017896|IPR017900|IPR021817|IPR022153 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Cysteine-rich domain|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Protein of unknown function DUF3400|Protein of unknown function DUF3683 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.30.43.10|PF01565|PF02754|PF02913|PF11880|PF12447|PF13183|PS00198|SSF46548|SSF55103|SSF56176 ALFP_RS16020 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011576|IPR012349|IPR014419 FMN-binding split barrel|Heme utilization protein with pyridoxamine 5'-phosphate domain|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01243|PIRSF004633|SSF50475 ALFP_RS16025 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000209|IPR005546|IPR006315|IPR012332|IPR013425|IPR015500|IPR022398|IPR023827|IPR023828 Autotransporter beta-domain|Autotransporter-associated beta strand repeat|Outer membrane autotransporter barrel|P22 tailspike C-terminal domain-like|Peptidase S8, subtilisin, Asp-active site|Peptidase S8, subtilisin, His-active site|Peptidase S8, subtilisin, Ser-active site|Peptidase S8, subtilisin-related|Peptidase S8/S53 domain GO:0004252|GO:0006508|GO:0019867 G3DSA:2.160.20.20|G3DSA:2.40.128.130|G3DSA:3.40.50.200|PF00082|PF03797|PF12951|PR00723|PS00136|PS00137|PS00138|SM00869|SSF103515|SSF52743|TIGR01414|TIGR02601 ALFP_RS16030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000836|IPR005764|IPR029057 Adenine phosphoribosyl transferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0003999|GO:0005737|GO:0006168|GO:0009116 G3DSA:3.40.50.2020|MF_00004|PF00156|SSF53271|TIGR01090 ALFP_RS16035 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR011527|IPR014223|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123|TIGR02868 ALFP_RS16040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR011527|IPR014216|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016020|GO:0016021|GO:0016887|GO:0042626|GO:0042883|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123|TIGR02857 ALFP_RS16045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011724|IPR012994 Cyd operon protein YbgT|Membrane bound YbgT-like PF08173|TIGR02106 ALFP_RS16050 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PF02322|PIRSF000267|TIGR00203 ALFP_RS16055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PF01654 ALFP_RS16060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011991|IPR026282 DNA-binding protein, MJ1563 type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12802|PIRSF006707|SSF46785 ALFP_RS16065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000644|IPR001347|IPR004800 CBS domain|Phosphosugar isomerase, KdsD/KpsF-type|Sugar isomerase (SIS) GO:0005975|GO:0016853|GO:0030246 G3DSA:3.10.580.10|G3DSA:3.40.50.10490|PF00571|PF01380|PIRSF004692|SM00116|SSF53697|TIGR00393 ALFP_RS16070 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010023|IPR023214 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase|HAD-like domain GO:0019143 G3DSA:3.40.50.1000|PF08282|PIRSF006118|SSF56784|TIGR01670 ALFP_RS16075 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010664|IPR026265 Lipopolysaccharide assembly, LptC-related|Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 G3DSA:2.60.450.10|PF06835|TIGR04409 ALFP_RS16080 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005653|IPR014340 Lipopolysaccharide export system protein LptA|Organic solvent tolerance-like, N-terminal GO:0001530|GO:0015920|GO:0042597 G3DSA:2.60.450.10|MF_01914|PF03968|TIGR03002 ALFP_RS16085 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030921|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|LPS export ABC transporter, ATP-binding protein LptB|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0043190|GO:0055085 G3DSA:3.40.50.300|PF00005|PF12399|PS00211|SM00382|SSF52540|TIGR04406 ALFP_RS16090 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 G3DSA:3.30.160.100|PF02482|SSF69754|TIGR00741 ALFP_RS16095 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002178|IPR016152 PTS EIIA type-2 domain|Phosphotransferase/anion transporter GO:0005215|GO:0006810 G3DSA:3.40.930.10|PF00359|PS00372|SSF55804 ALFP_RS16100 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003755|IPR011104|IPR011126|IPR027417|IPR028979 HPr kinase/phosphorylase, C-terminal|HPr(Ser) kinase/phosphorylase|HPr(Ser) kinase/phosphorylase, N-terminal|HPr(Ser) kinase/phosphorylase, N-terminal domain-like|P-loop containing nucleoside triphosphate hydrolase GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 G3DSA:3.40.1390.20|G3DSA:3.40.50.300|MF_01249|PF02603|PF07475|SSF53795|SSF75138|TIGR00679 ALFP_RS16105 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005337|IPR027417 P-loop containing nucleoside triphosphate hydrolase|RapZ-like family GO:0005524 G3DSA:3.40.50.300|MF_00636|PF03668|PIRSF005052|SSF52540 ALFP_RS16110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007730|IPR009009|IPR012997 Rare lipoprotein A|RlpA-like protein, double-psi beta-barrel domain|Sporulation-related domain GO:0042834 G3DSA:2.40.40.10|G3DSA:3.30.70.1070|PF03330|PF05036|SSF110997|SSF50685|TIGR00413 ALFP_RS16115 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000878|IPR008189|IPR014776|IPR014777|IPR018063 SAM-dependent methyltransferase RsmI, conserved site|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I GO:0008152|GO:0008168 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|MF_01877|PF00590|PIRSF005917|PS01296|SSF53790|TIGR00096 ALFP_RS16120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003509|IPR011335|IPR011856 Restriction endonuclease type II-like|Uncharacterised protein family UPF0102|tRNA endonuclease-like domain GO:0003676|GO:0004518 G3DSA:3.40.1350.10|MF_00048|PF02021|SSF52980|TIGR00252 ALFP_RS16125 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001347|IPR004515 Phosphoheptose isomerase|Sugar isomerase (SIS) GO:0005737|GO:0005975|GO:0008968|GO:0030246 G3DSA:3.40.50.10490|MF_00067|PF13580|SSF53697 ALFP_RS16130 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|SM00749 ALFP_RS16135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012336|IPR013740 Redoxin|Thioredoxin-like fold GO:0016491 G3DSA:3.40.30.10|PF08534|SSF52833 ALFP_RS16140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001048|IPR001057|IPR004662 Acetylglutamate kinase|Aspartate/glutamate/uridylate kinase|Glutamate/acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526|GO:0006561 G3DSA:3.40.1160.10|MF_00082_B|PF00696|PIRSF000728|PR00474|SSF53633|TIGR00761 ALFP_RS16145 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006439|IPR010237|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Pyrimidine 5-nucleotidase GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01509|TIGR01993 ALFP_RS16150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|SSF53720 ALFP_RS16155 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR018060|IPR018062|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|PR00032|PS00041|SM00342|SSF46689 ALFP_RS16160 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000594|IPR016040 NAD(P)-binding domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|SSF69572 ALFP_RS16165 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001478|IPR004447|IPR005151|IPR029045 C-terminal-processing peptidase S41A|ClpP/crotonase-like domain|PDZ domain|Tail specific protease GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF03572|PF13180|SM00228|SM00245|SSF50156|SSF52096|TIGR00225 ALFP_RS16170 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|SSF51261 ALFP_RS16175 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001345|IPR005952|IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|Phosphoglycerate mutase 1|Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0004619|GO:0006096|GO:0008152|GO:0016868 G3DSA:3.40.50.1240|MF_01039|PF00300|PS00175|SM00855|SSF53254|TIGR01258 ALFP_RS16180 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 ALFP_RS16185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002109|IPR011767|IPR011900|IPR012336|IPR014025 Glutaredoxin|Glutaredoxin active site|Glutaredoxin subgroup|Glutaredoxin, GrxC|Thioredoxin-like fold GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PR00160|PS00195|SSF52833|TIGR02181 ALFP_RS16190 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 G3DSA:3.10.420.10|MF_00821|PF02556|PR01594|SSF54611|TIGR00809 ALFP_RS16195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006109|IPR006168|IPR008927|IPR011128|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Glycerol-3-phosphate dehydrogenase, NAD-dependent|Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal|Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal|NAD(P)-binding domain GO:0004367|GO:0005975|GO:0006072|GO:0009331|GO:0016491|GO:0016616|GO:0046168|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00394|PF01210|PF07479|PIRSF000114|PR00077|PS00957|SSF48179|SSF51735 ALFP_RS16200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|SSF53850 ALFP_RS16205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001537|IPR016914|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (cytidine/uridine-2'-O-)-methyltransferase|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0001510|GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.40.1280.10|MF_01885|PF00588|PIRSF029256|SSF75217 ALFP_RS16210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|SSF53271 ALFP_RS16215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 ALFP_RS16220 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010917|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|SSF56935 ALFP_RS16225 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 ALFP_RS16230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|SM00304|SM00387|SM00388|SSF47384|SSF55874 ALFP_RS16235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 G3DSA:3.40.50.960|MF_00178|PF00885|SSF52121 ALFP_RS16240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR002197|IPR009057|IPR011006 CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.2300|PF00072|PF02954|SM00448|SSF46689|SSF52172 ALFP_RS16245 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000014|IPR003594|IPR003660|IPR003661|IPR004358|IPR017232 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, nitrogen fixation and metabolism regulator|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PF13188|PIRSF037532|PR00344|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55785|SSF55874 ALFP_RS16250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025500 Protein of unknown function DUF4390 PF14334 ALFP_RS16255 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001678|IPR004573|IPR006027|IPR018314|IPR023267|IPR029063 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site|NusB/RsmB/TIM44|RNA (C5-cytosine) methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase|SAM-dependent methyltransferase RsmB/NOP2-type|rRNA small subunit methyltransferase B GO:0003723|GO:0006355|GO:0006364|GO:0008168|GO:0008649 G3DSA:1.10.287.730|G3DSA:1.10.940.10|G3DSA:3.30.70.1170|G3DSA:3.40.50.150|PF01189|PR02008|PS01153|SSF48013|SSF53335|TIGR00563 ALFP_RS16260 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002792|IPR005839|IPR005840|IPR006638|IPR007197|IPR012340|IPR013848|IPR020612|IPR023404 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Nucleic acid-binding, OB-fold|Radical SAM|Radical SAM, alpha/beta horseshoe|Ribosomal protein S12 methylthiotransferase RimO|TRAM domain GO:0003824|GO:0005737|GO:0009451|GO:0016740|GO:0018339|GO:0043412|GO:0051536|GO:0051539 G3DSA:2.40.50.140|G3DSA:3.80.30.20|MF_01865|PF00919|PF01938|PF04055|PS01278|SM00729|SSF102114|TIGR00089|TIGR01125 ALFP_RS16265 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001451|IPR011004 Hexapeptide repeat|Trimeric LpxA-like G3DSA:2.160.10.10|PF00132|SSF51161 ALFP_RS16270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015942|IPR026286|IPR028615 Asp/Glu/hydantoin racemase|Maleate isomerase|Maleate isomerase/Arylmalonate decarboxylase GO:0006807|GO:0036361|GO:0050076 MF_00943|PF01177|PIRSF015736 ALFP_RS16275 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS16285 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 ALFP_RS16290 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS16295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic G3DSA:3.40.190.10|PF13379|SSF53850 ALFP_RS16300 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 G3DSA:1.10.287.210|G3DSA:3.30.1890.10|PF02706|SSF160355 ALFP_RS16305 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic PF14897 ALFP_RS16310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic PF13692|SSF53756 ALFP_RS16315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001538|IPR005835|IPR006375|IPR011051|IPR014710|IPR029044 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase|Mannose-6-phosphate isomerase, type II, C-terminal|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0000271|GO:0005976|GO:0009058|GO:0016779 G3DSA:2.60.120.10|G3DSA:3.90.550.10|PF00483|PF01050|SSF51182|SSF53448|TIGR01479 ALFP_RS16320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 ALFP_RS16325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 ALFP_RS16330 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003362|IPR017475 Bacterial sugar transferase|Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase PF02397|TIGR03025 ALFP_RS16335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007016 O-antigen ligase-related PF04932 ALFP_RS16340 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002797|IPR029303 Polysaccharide biosynthesis protein|Polysaccharide biosynthesis protein, C-terminal domain GO:0016020 PF01943|PF14667 ALFP_RS16345 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005888|IPR016040 NAD(P)-binding domain|dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|SSF51735|TIGR01181 ALFP_RS16350 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005835|IPR005907|IPR029044 Glucose-1-phosphate thymidylyltransferase, short form|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0008879|GO:0009058|GO:0016779|GO:0045226 G3DSA:3.90.550.10|PF00483|SSF53448|TIGR01207 ALFP_RS16355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000888|IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold|dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 G3DSA:2.60.120.10|PD001462|PF00908|SSF51182|TIGR01221 ALFP_RS16360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005913|IPR016040|IPR029903 NAD(P)-binding domain|RmlD-like substrate binding domain|dTDP-4-dehydrorhamnose reductase family G3DSA:3.40.50.720|PF04321|SSF51735|TIGR01214 ALFP_RS16365 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001469|IPR020546|IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain|ATPase, F1 complex, delta/epsilon subunit|ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:1.20.5.440|G3DSA:2.60.15.10|MF_00530|PD000944|PF02823|SSF46604|SSF51344|TIGR01216 ALFP_RS16370 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000194|IPR000793|IPR003593|IPR004100|IPR005722|IPR020003|IPR024034|IPR027417 AAA+ ATPase domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex beta subunit/V1 complex, C-terminal|ATPase, F1 complex, beta subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0046034|GO:0046933 G3DSA:1.10.1140.10|G3DSA:2.40.10.170|G3DSA:3.40.50.300|MF_01347|PF00006|PF02874|PS00152|SM00382|SSF47917|SSF50615|SSF52540|TIGR01039 ALFP_RS16375 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000131|IPR023632|IPR023633 ATPase, F1 complex, gamma subunit|ATPase, F1 complex, gamma subunit conserved site|ATPase, F1 complex, gamma subunit domain GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:1.10.287.80|G3DSA:3.40.1380.10|MF_00815|PF00231|PR00126|PS00153|SSF52943|TIGR01146 ALFP_RS16380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000194|IPR000793|IPR004100|IPR005294|IPR020003|IPR023366|IPR027417 ATP synthase subunit alpha-like domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex, alpha subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0045261|GO:0046034|GO:0046933|GO:0046961 G3DSA:1.20.150.20|G3DSA:2.40.30.20|G3DSA:3.40.50.300|MF_01346|PF00006|PF00306|PF02874|PIRSF039088|PS00152|SSF47917|SSF50615|SSF52540|TIGR00962 ALFP_RS16385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000711|IPR026015 ATPase, OSCP/delta subunit|F1F0 ATP synthase OSCP/delta subunit, N-terminal domain GO:0015986|GO:0046933 G3DSA:1.10.520.20|MF_01416|PF00213|PR00125|SSF47928|TIGR01145 ALFP_RS16390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002146|IPR005864|IPR028987 ATPase, F0 complex, subunit B, bacterial|ATPase, F0 complex, subunit B/B', bacterial/chloroplast|F-type ATP synthase subunit B-like, membrane domain GO:0015078|GO:0015986|GO:0045263 G3DSA:1.20.5.620|MF_01398|PF00430|SSF81573|TIGR01144 ALFP_RS16395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000454|IPR002379|IPR005953|IPR020537 ATPase, F0 complex, subunit C|ATPase, F0 complex, subunit C, DCCD-binding site|ATPase, F0 complex, subunit C, bacterial/chloroplast|V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015986|GO:0015991|GO:0033177|GO:0045263 G3DSA:1.20.20.10|MF_01396|PF00137|PS00605|SSF81333|TIGR01260 ALFP_RS16400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000568|IPR023011 ATPase, F0 complex, subunit A|ATPase, F0 complex, subunit A, active site GO:0015078|GO:0015986 G3DSA:1.20.120.220|MF_01393|PF00119|PS00449|SSF81336|TIGR01131 ALFP_RS16405 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005598 ATP synthase protein I PF03899 ALFP_RS16410 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|SSF52096 ALFP_RS16415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001478|IPR007963|IPR024191 PDZ domain|Peptidase M61|Peptidase M61, catalytic domain GO:0005515 G3DSA:2.30.42.10|PF05299|PF13180|PIRSF016493|SSF50156|SSF55486 ALFP_RS16420 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006156|IPR006157 Dihydroneopterin aldolase|Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 G3DSA:3.30.1130.10|PF02152|SM00905|SSF55620|TIGR00525|TIGR00526 ALFP_RS16425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011063|IPR012089|IPR014729 2-thiocytidine tRNA biosynthesis protein, TtcA|Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0008033 G3DSA:3.40.50.620|MF_01850|PF01171|SSF52402 ALFP_RS16430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003382|IPR004507 Flavin prenyltransferase UbiX/Pad1|Flavoprotein GO:0003824 G3DSA:3.40.50.1950|MF_01984|PF02441|SSF52507|TIGR00421 ALFP_RS16435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002109|IPR004480|IPR012336|IPR014434 Glutaredoxin|Monothiol glutaredoxin|Monothiol glutaredoxin-related|Thioredoxin-like fold GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PIRSF005894|SSF52833|TIGR00365 ALFP_RS16440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002052|IPR004556|IPR019874|IPR025714|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase domain|Modification methylase HemK|Protein-(glutamine-N5) methyltransferase, release factor-specific|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0006479|GO:0008168|GO:0008276|GO:0032259 G3DSA:1.10.8.10|G3DSA:3.40.50.150|MF_02126|PF13847|PR00507|PS00092|SSF53335|TIGR00536|TIGR03534 ALFP_RS16445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000352|IPR004373|IPR005139|IPR014720 Double-stranded RNA-binding domain|Peptide chain release factor|Peptide chain release factor 1|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|MF_00093|PF00472|PF03462|PS00745|SM00937|SSF75620|TIGR00019 ALFP_RS16450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000343|IPR006151|IPR015895|IPR015896|IPR016040|IPR018214 Glutamyl-tRNA reductase, conserved site|NAD(P)-binding domain|Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 G3DSA:3.40.50.720|MF_00087|PF00745|PF01488|PF05201|PIRSF000445|PS00747|SSF51735|SSF69075|SSF69742|TIGR01035 ALFP_RS16460 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 ALFP_RS16465 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021026 Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739 PF12545 ALFP_RS16470 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000184|IPR013686 Bacterial surface antigen (D15)|Polypeptide-transport-associated, ShlB-type GO:0019867 G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF01103|PF08479 ALFP_RS16480 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR019410|IPR029063 Lysine methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF10294|SSF53335 ALFP_RS16485 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|SSF53335 ALFP_RS16490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010105|IPR011662|IPR012910 Secretin/TonB, short N-terminal domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07660|PF07715|SM00965|SSF56935|TIGR01783 ALFP_RS16495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006860|IPR012373|IPR032508|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal|Protein FecR, C-terminal PF04773|PF16220|PF16344|PIRSF018266 ALFP_RS16500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 ALFP_RS16505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007436 Protein of unknown function DUF485 PF04341 ALFP_RS16510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001734|IPR018212 Sodium/solute symporter|Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474|PS00456 ALFP_RS16515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|SSF56317 ALFP_RS16520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS16525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 G3DSA:2.60.40.200|PF00080|SSF49329 ALFP_RS16530 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF16242|SSF50475 ALFP_RS16535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007820|IPR017516 AbrB duplication|AbrB family GO:0010468|GO:0016021 PF05145|PIRSF038991|TIGR03082 ALFP_RS16540 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002823 Protein of unknown function DUF112, transmembrane PF01970 ALFP_RS16545 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009936 Protein of unknown function DUF1468 PF07331 ALFP_RS16550 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS16555 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003594|IPR003661|IPR004358|IPR013727 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Two-component sensor kinase, N-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PF08521|PR00344|SM00387|SM00388|SSF47384|SSF55874 ALFP_RS16560 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 ALFP_RS16565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS16570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005828|IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PF07690|PS00216|PS00217|SSF103473 ALFP_RS16575 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|SSF56317 ALFP_RS16580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 ALFP_RS16585 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 ALFP_RS16590 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007418 Protein of unknown function DUF474 PIRSF015875 ALFP_RS16595 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS16600 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS16605 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003773|IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type|Menaquinone biosynthesis enzyme G3DSA:3.40.190.10|PF02621|PIRSF027386|SSF53850 ALFP_RS16610 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|SM00100|SM00419|SSF46785|SSF51206 ALFP_RS16615 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001486|IPR009050|IPR012292|IPR014710|IPR015392 Domain of unknown function DUF1971|Globin-like|Globin/Protoglobin|RmlC-like jelly roll fold|Truncated hemoglobin GO:0019825|GO:0020037 G3DSA:1.10.490.10|G3DSA:2.60.120.10|PF01152|PF09313|SSF46458|SSF51197 ALFP_RS16620 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006656|IPR006963|IPR027467 Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0016491|GO:0051539|GO:0055114 G3DSA:2.20.25.90|G3DSA:3.40.50.740|PF00384|PF04879|PS00551|SM00926|SSF53706 ALFP_RS16625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006443|IPR006655|IPR006656|IPR006657|IPR009010 Aspartate decarboxylase-like domain|Formate dehydrogenase-N, alpha subunit|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0008863|GO:0009055|GO:0016491|GO:0030151|GO:0043546|GO:0045333|GO:0047111|GO:0055114 G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PS00932|SSF50692|SSF53706|TIGR01553 ALFP_RS16630 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006470|IPR014603|IPR015246|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Formate dehydrogenase iron-sulphur subunit|Formate dehydrogenase iron-sulphur subunit, Proteobacteria|Formate dehydrogenase, transmembrane GO:0015944|GO:0016021|GO:0045333|GO:0051539 G3DSA:1.10.1060.10|G3DSA:1.20.5.480|G3DSA:3.30.70.20|PF09163|PF13247|PIRSF036298|PS00198|SSF54862|TIGR01582 ALFP_RS16635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006471|IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane|Formate dehydrogenase, gamma subunit GO:0008863|GO:0009055|GO:0009326|GO:0016020|GO:0016021|GO:0022904|GO:0045333 G3DSA:1.20.950.20|PF01292|SSF81342|TIGR01583 ALFP_RS16640 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006452|IPR024064 FdhE-like|Formate dehydrogenase accessory protein GO:0005737 G3DSA:3.90.1670.10|MF_00611|PF04216|PIRSF018296|SSF144020|TIGR01562 ALFP_RS16645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004534|IPR015421|IPR015424|IPR018319|IPR025862 L-seryl-tRNA selenium transferase N-terminal domain|L-seryl-tRNA selenium transferase-like|L-seryl-tRNA(Sec) selenium transferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0001514|GO:0003824|GO:0004125|GO:0005737 G3DSA:3.40.640.10|MF_00423|PF03841|PF12390|SSF53383|TIGR00474 ALFP_RS16650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004161|IPR004535|IPR009000|IPR009001|IPR011991|IPR015190|IPR015191|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Tr-type G domain, conserved site|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu-like, domain 2|Translation elongation factor SelB, winged helix, type 2|Translation elongation factor SelB, winged helix, type 3|Translation elongation factor, selenocysteine-specific|Translation protein, beta-barrel domain|Winged helix-turn-helix DNA-binding domain GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 G3DSA:1.10.10.10|G3DSA:2.40.30.10|G3DSA:3.40.50.300|PF00009|PF03144|PF09106|PF09107|PS00301|SSF46785|SSF50447|SSF50465|SSF52540|TIGR00475 ALFP_RS16660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001387|IPR010982|IPR011051|IPR013096|IPR014710 Cro/C1-type helix-turn-helix domain|Cupin 2, conserved barrel|Lambda repressor-like, DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF01381|PF07883|SM00530|SSF47413|SSF51182 ALFP_RS16665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|SM01007|SSF53639 ALFP_RS16670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13410|PF13417|SSF47616|SSF52833 ALFP_RS16675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS16680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010105|IPR010917|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|SSF56935|TIGR01783 ALFP_RS16685 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SSF52151 ALFP_RS16690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010105|IPR010917|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|SSF56935|TIGR01783 ALFP_RS16695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004536|IPR010918|IPR016188|IPR023061 AIR synthase-related protein, C-terminal domain|PurM-like, N-terminal domain|Selenophosphate synthetase|Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00625|PF00586|PF02769|PIRSF036407|SSF55326|SSF56042|TIGR00476 ALFP_RS16700 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS16705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|SSF56281 ALFP_RS16710 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS16715 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001763|IPR017582|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Rhodanese-like domain|tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 G3DSA:3.40.250.10|MF_01622|SM00450|SSF52540|SSF52821|TIGR03167 ALFP_RS16720 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007329|IPR011399|IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain|FMN-binding|Nitrous oxide reductase expression regulator NosR GO:0003677|GO:0010181|GO:0016020|GO:0045893 G3DSA:3.30.70.20|PF12801|PIRSF036354|SM00900|SSF54862 ALFP_RS16725 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008972|IPR011045|IPR015943|IPR023644 Cupredoxin|Nitrous oxide reductase, N-terminal|Nitrous-oxide reductase|WD40/YVTN repeat-like-containing domain GO:0005507|GO:0005509|GO:0005515|GO:0050304|GO:0055114 G3DSA:2.130.10.10|G3DSA:2.60.40.420|MF_00716|SSF49503|SSF50974|TIGR04244 ALFP_RS16730 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006626|IPR006633|IPR007742|IPR011050|IPR012334|IPR022441|IPR026464 Carbohydrate-binding/sugar hydrolysis domain|Nitrous oxide reductase family maturation protein NosD|Parallel beta-helix repeat|Parallel beta-helix repeat-2|Pectin lyase fold|Pectin lyase fold/virulence factor|Periplasmic copper-binding protein NosD, beta helix domain G3DSA:2.160.20.10|PF05048|SM00710|SM00722|SSF51126|TIGR03804|TIGR04247 ALFP_RS16735 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS16740 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR032688 ABC-2 family transporter protein GO:0006810 PF12679 ALFP_RS16745 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008719 Nitrous oxide reductase accessory protein NosL PF05573|SSF160387 ALFP_RS16750 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003374|IPR024932 ApbE-like domain|Flavin transferase ApbE GO:0017013 PF02424|PIRSF006268|SSF143631 ALFP_RS16755 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001672|IPR018189|IPR023096 Phosphoglucose isomerase (PGI)|Phosphoglucose isomerase, C-terminal|Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 G3DSA:1.10.1390.10|G3DSA:3.40.50.10490|MF_00473|PF00342|PR00662|PS00174|PS00765|SSF53697 ALFP_RS16760 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic SSF89447 ALFP_RS16765 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002716|IPR029060 PIN domain|PIN domain-like G3DSA:3.40.50.1010|PF01850|SSF88723 ALFP_RS16770 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|SSF53649 ALFP_RS16775 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00081|PS00061|SSF51735 ALFP_RS16780 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF13641|SSF53448 ALFP_RS16785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic PF13524 ALFP_RS16790 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13579|PF13692|SSF53756 ALFP_RS16795 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|SSF88713 ALFP_RS16805 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR029465 TupA-like ATPgrasp protein PF14305|SSF56059 ALFP_RS16810 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|SSF53756 ALFP_RS16815 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PF13579|PF13692|SSF53756 ALFP_RS16820 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028359 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0016616|GO:0016628|GO:0051287|GO:0055114 G3DSA:1.20.5.100|G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500136|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 ALFP_RS16825 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003331|IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like|UDP-N-acetylglucosamine 2-epimerase domain GO:0008761 G3DSA:3.40.50.2000|PF02350|SSF53756|TIGR00236 ALFP_RS16830 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 PF02706 ALFP_RS16835 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR017871|IPR027417 ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SSF52540 ALFP_RS16840 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PR00164 ALFP_RS16845 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563 ALFP_RS16850 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383 ALFP_RS16855 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001227|IPR002364|IPR009081|IPR011032|IPR013149|IPR013154|IPR013968|IPR014030|IPR014031|IPR014043|IPR016035|IPR016036|IPR016039|IPR016040|IPR018201|IPR020801|IPR020806|IPR020807|IPR020841|IPR020843|IPR029063|IPR032821 Acyl transferase|Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|GroES-like|Ketoacyl-synthetase, C-terminal extension|Malonyl-CoA ACP transacylase, ACP-binding|NAD(P)-binding domain|Phosphopantetheine binding ACP domain|Polyketide synthase, acyl transferase domain|Polyketide synthase, beta-ketoacyl synthase domain|Polyketide synthase, dehydratase domain|Polyketide synthase, enoylreductase domain|Polyketide synthase, ketoreductase domain|Polyketide synthase, phosphopantetheine-binding domain|Quinone oxidoreductase/zeta-crystallin, conserved site|S-adenosyl-L-methionine-dependent methyltransferase|Thiolase-like GO:0003824|GO:0008152|GO:0008270|GO:0016491|GO:0016740|GO:0031177|GO:0055114 G3DSA:1.10.1200.10|G3DSA:3.30.70.250|G3DSA:3.40.366.10|G3DSA:3.40.47.10|G3DSA:3.40.50.150|G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF00109|PF00550|PF00698|PF02801|PF08240|PF08659|PF13489|PF14765|PF16197|PS00606|PS01162|SM00822|SM00823|SM00825|SM00826|SM00827|SM00829|SM01294|SSF47336|SSF50129|SSF51735|SSF52151|SSF53335|SSF53901|SSF55048 ALFP_RS16860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006042|IPR006043 Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00860|TIGR00801 ALFP_RS16865 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS16870 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|SM00345|SSF46785|SSF53383 ALFP_RS16875 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 ALFP_RS16880 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011009|IPR013229 PEGA|Protein kinase-like domain PF08308|SSF56112 ALFP_RS16885 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017748 Type VI secretion system-associated, BMAA0400 G3DSA:3.40.1730.10|PF09867|PIRSF029287|TIGR03373 ALFP_RS16890 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009612|IPR010623|IPR017731|IPR025743|IPR027417 ImcF-related|ImcF-related, N-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Type VI secretion system IcmF, C-terminal|Type VI secretion system, IcmF G3DSA:3.40.50.300|PF06744|PF06761|PF14331|SSF52540|TIGR03348 ALFP_RS16895 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006665|IPR017732|IPR017733 OmpA-like domain|Type IV / VI secretion system, DotU|Type VI secretion system peptidoglycan-associated domain G3DSA:3.30.1330.60|PF00691|PF09850|SSF103088|TIGR03349|TIGR03350 ALFP_RS16900 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010263 Type VI secretion protein, VC_A0114 PF05936|TIGR03353 ALFP_RS16905 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017734 Type VI secretion system, lipoprotein SciN PF12790|TIGR03352 ALFP_RS16915 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000253|IPR008984 Forkhead-associated (FHA) domain|SMAD/FHA domain GO:0005515 G3DSA:2.60.200.20|SSF49879 ALFP_RS16920 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010732 Type VI secretion, TssG-like PF06996|TIGR03347 ALFP_RS16925 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010272 Type VI secretion system, TssF-like PF05947|PIRSF028304|TIGR03359 ALFP_RS16930 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007048|IPR017737 GpW/Gp25/anti-adapter protein IraD|Type VI secretion system, lysozyme-related protein PF04965|SSF160719|TIGR03357 ALFP_RS16935 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008514 Type VI secretion system effector, Hcp G3DSA:2.30.110.20|PF05638|SSF141452 ALFP_RS16940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PF05943|TIGR03355 ALFP_RS16945 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PF05591|PIRSF028301|TIGR03358 ALFP_RS16950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010657|IPR017740 ImpA, N-terminal|Type VI secretion system-associated, ImpA PF06812|TIGR03363 ALFP_RS16960 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011856|IPR025425 Domain of unknown function DUF4150|tRNA endonuclease-like domain GO:0003676|GO:0004518 G3DSA:3.40.1350.10|PF13665 ALFP_RS16965 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001646 Pentapeptide repeat PF00805|PF13599|SSF141571 ALFP_RS16970 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001646|IPR018683 Domain of unknown function DUF2169|Pentapeptide repeat PF00805|PF09937|PF13599|SSF141571 ALFP_RS16980 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006531|IPR006533|IPR017847 Gp5 N-terminal|Type VI secretion system, RhsGE-associated Vgr family subset|Type VI secretion system, RhsGE-associated Vgr protein G3DSA:2.40.50.230|G3DSA:3.55.50.10|PF05954|SSF69255|SSF69279|SSF69349|TIGR01646|TIGR03361 ALFP_RS16985 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021927 Protein of unknown function DUF3540 PF12059 ALFP_RS16990 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002155|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|SSF53901|TIGR01930 ALFP_RS16995 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001753|IPR006108|IPR006176|IPR008927|IPR013328|IPR016040|IPR029045 3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|ClpP/crotonase-like domain|Crotonase superfamily|NAD(P)-binding domain GO:0003824|GO:0003857|GO:0006631|GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|G3DSA:3.90.226.10|PF00378|PF00725|PF02737|SSF48179|SSF51735|SSF52096 ALFP_RS17000 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003370 Chromate transporter GO:0015109|GO:0015703 PF02417 ALFP_RS17005 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003370 Chromate transporter GO:0015109|GO:0015703 PF02417 ALFP_RS17010 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS17015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003453|IPR030802 ABC transport permease subunit MlaE, Proteobacteria|ABC transporter permease MalE GO:0006810|GO:0043190 PF02405|TIGR00056 ALFP_RS17020 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003399|IPR030970 Mce/MlaD|Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 PF02470|TIGR04430 ALFP_RS17025 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007428 MlaA lipoprotein GO:0016020 PF04333|PR01805 ALFP_RS17030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008869|IPR023094|IPR032710 NTF2-like domain|Toluene tolerance Ttg2/phospholipid-binding protein MlaC|Toluene tolerance protein, alpha-helical G3DSA:1.10.10.640|G3DSA:3.10.450.50|PF05494|PIRSF004649 ALFP_RS17035 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS17040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PIRSF006648|PR00164 ALFP_RS17045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002634 BolA protein G3DSA:3.30.300.90|PF01722|PIRSF003113|SSF82657 ALFP_RS17050 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001986|IPR005750|IPR013792 Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta|UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0003824|GO:0008760|GO:0016765|GO:0019277 G3DSA:3.65.10.10|MF_00111|PF00275|SSF55205|TIGR01072 ALFP_RS17055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013820|IPR018198|IPR024893 ATP phosphoribosyltransferase HisG, short form|ATP phosphoribosyltransferase, catalytic domain|ATP phosphoribosyltransferase, conserved site GO:0000105|GO:0003879|GO:0005737 G3DSA:3.40.190.10|MF_01018|PF01634|PS01316|SSF53850|TIGR00070 ALFP_RS17060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001692|IPR012131|IPR016161|IPR022695 Aldehyde/histidinol dehydrogenase|Histidinol dehydrogenase|Histidinol dehydrogenase, conserved site|Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008152|GO:0008270|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.1980|MF_01024|PF00815|PIRSF000099|PR00083|PS00611|SSF53720|TIGR00069 ALFP_RS17065 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000807|IPR020565|IPR020568 Imidazoleglycerol-phosphate dehydratase|Imidazoleglycerol-phosphate dehydratase, conserved site|Ribosomal protein S5 domain 2-type fold GO:0000105|GO:0004424 G3DSA:3.30.230.40|MF_00076|PF00475|PS00954|PS00955|SSF54211 ALFP_RS17070 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010139|IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase|Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 G3DSA:3.40.50.880|MF_00278|PF00117|PIRSF000495|SSF52317|TIGR01855 ALFP_RS17075 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006062|IPR006063|IPR011060|IPR013785|IPR023016 Aldolase-type TIM barrel|Histidine biosynthesis|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA|Ribulose-phosphate binding barrel GO:0000105|GO:0003824|GO:0003949|GO:0008152 G3DSA:3.20.20.70|MF_01014|PF00977|SSF51366|TIGR00007 ALFP_RS17080 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004651|IPR006062|IPR011060|IPR013785 Aldolase-type TIM barrel|Histidine biosynthesis|Histidine biosynthesis, HisF|Ribulose-phosphate binding barrel GO:0000105|GO:0000107|GO:0003824|GO:0005737|GO:0008152 G3DSA:3.20.20.70|MF_01013|PF00977|SSF51366|TIGR00735 ALFP_RS17085 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002496|IPR026660 Phosphoribosyl-AMP cyclohydrolase|Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 MF_01021|PD002610|PF01502|SSF141734 ALFP_RS17090 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008179|IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase|Phosphoribosyl-ATP pyrophosphohydrolase-like GO:0000105|GO:0004636 MF_01020|PF01503|SSF101386|TIGR03188 ALFP_RS17095 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001310|IPR011146|IPR019808 HIT-like domain|Histidine triad (HIT) protein|Histidine triad, conserved site GO:0003824 G3DSA:3.30.428.10|PF01230|PR00332|PS00892|SSF54197 ALFP_RS17100 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003369|IPR006312 Sec-independent protein translocase protein TatA/B/E|Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 MF_00236|PF02416|TIGR01411 ALFP_RS17105 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003369|IPR003998|IPR018448 Sec-independent protein translocase protein TatA/B/E|Twin-arginine translocation protein TatB|Twin-arginine translocation protein TatB-like GO:0008565|GO:0009306|GO:0015031|GO:0016020|GO:0043953 MF_00237|PF02416|PR01506|TIGR01410 ALFP_RS17110 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MF_00902|PF00902|PR01840|TIGR00945 ALFP_RS17115 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001478|IPR001940|IPR009003 PDZ domain|Peptidase S1, PA clan|Peptidase S1C GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|SM00228|SSF50156|SSF50494 ALFP_RS17120 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002678 GTP cyclohydrolase 1 type 2/Nif3 G3DSA:3.40.1390.30|PF01784|SSF102705|TIGR00486 ALFP_RS17125 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001185|IPR019823 Large-conductance mechanosensitive channel|Large-conductance mechanosensitive channel, conserved site GO:0005216|GO:0006810|GO:0016021 PF01741|PR01264|PS01327|SSF81330|TIGR00220 ALFP_RS17130 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005805|IPR006317|IPR017941 Rieske [2Fe-2S] iron-sulphur domain|Rieske iron-sulphur protein, C-terminal|Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0016020|GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PR00162|SSF50022|TIGR01416 ALFP_RS17135 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005797|IPR005798|IPR016174|IPR027387 Cytochrome b/b6, C-terminal|Cytochrome b/b6, N-terminal|Cytochrome b/b6-like domain|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016491|GO:0022904 G3DSA:1.20.810.10|PF00032|PF00033|SSF81342|SSF81648 ALFP_RS17140 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002326|IPR009056 Cytochrome c-like domain|Cytochrome c1 GO:0009055|GO:0020037 G3DSA:1.10.760.10|G3DSA:1.20.5.100|PF02167|PR00603|SSF46626 ALFP_RS17145 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13410|PF13417|SSF47616|SSF52833 ALFP_RS17150 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007481 Stringent starvation protein B G3DSA:2.30.30.220|PF04386|PIRSF005276|SSF101738 ALFP_RS17155 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR005667|IPR011866 ABC transporter type 1, transmembrane domain MetI-like|Sulphate ABC transporter permease protein 2|Sulphate ABC transporter, permease protein CysW GO:0006810|GO:0008272|GO:0015116|GO:0015419|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR00969|TIGR02140 ALFP_RS17160 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR005667|IPR011865 ABC transporter type 1, transmembrane domain MetI-like|Sulphate ABC transporter permease protein 2|Sulphate ABC transporter, permease protein CysT GO:0006810|GO:0008272|GO:0015116|GO:0015419|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR00969|TIGR02139 ALFP_RS17165 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000957|IPR005669 Sulphate/thiosulphate-binding, conserved site|Thiosulphate/Sulfate-binding protein GO:0008271|GO:0008272|GO:0015419|GO:0030288 G3DSA:3.40.190.10|PF13531|PS00757|SSF53850|TIGR00971 ALFP_RS17175 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 ALFP_RS17180 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 ALFP_RS17185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS17190 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005720|IPR012135|IPR013785 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain|Dihydroorotate dehydrogenase, class 1/ 2 GO:0003824|GO:0004152|GO:0005737|GO:0006222|GO:0016627|GO:0055114 G3DSA:3.20.20.70|PF01180|PIRSF000164|SSF51395 ALFP_RS17195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011008 Dimeric alpha-beta barrel G3DSA:3.30.70.900|SSF54909 ALFP_RS17200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 ALFP_RS17205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013342|IPR018110|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF13378|PS00909|SM00922|SSF51604|SSF54826 ALFP_RS17210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000391|IPR032710 NTF2-like domain|Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 G3DSA:3.10.450.50|PF00866|SSF54427 ALFP_RS17215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001663|IPR015879|IPR015881|IPR017941 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site|Aromatic-ring-hydroxylating dioxygenase, alpha subunit|Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0006725|GO:0016491|GO:0016705|GO:0016708|GO:0019439|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|PR00090|PS00570|SSF50022|SSF55961 ALFP_RS17220 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|SSF51316 ALFP_RS17225 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000262|IPR008259|IPR012133|IPR013785 Aldolase-type TIM barrel|Alpha-hydroxy acid dehydrogenase, FMN-dependent|FMN-dependent alpha-hydroxy acid dehydrogenase, active site|FMN-dependent dehydrogenase GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF01070|PIRSF000138|PS00557|SSF51395 ALFP_RS17230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006139|IPR006140|IPR016040 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|SSF51735|SSF52283 ALFP_RS17235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011008|IPR012577 Dimeric alpha-beta barrel|NIPSNAP G3DSA:3.30.70.900|PF07978|SSF54909 ALFP_RS17240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 ALFP_RS17245 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 ALFP_RS17250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480 ALFP_RS17255 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|SSF51735 ALFP_RS17260 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013022|IPR026040 Hydroxypyruvate isomerase-like|Xylose isomerase-like, TIM barrel domain G3DSA:3.20.20.150|PF01261|PIRSF006241|SSF51658 ALFP_RS17265 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|SSF48179|SSF51735 ALFP_RS17270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000581|IPR004404|IPR015928|IPR020558 Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0004160|GO:0008152|GO:0009082 MF_00012|PF00920|PS00886|PS00887|SSF143975|SSF52016|TIGR00110 ALFP_RS17275 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 ALFP_RS17280 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PS00519|SM00344|SSF46785|SSF54909 ALFP_RS17285 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004981|IPR017485 Tryptophan 2,3-dioxygenase|Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441|GO:0020037 MF_01972|PF03301|SSF140959|TIGR03036 ALFP_RS17290 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|SSF53474 ALFP_RS17295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 ALFP_RS17300 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS17305 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003700|IPR015813 Ketopantoate hydroxymethyltransferase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0003864|GO:0015940 G3DSA:3.20.20.60|MF_00156|PF02548|PIRSF000388|SSF51621|TIGR00222 ALFP_RS17310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018170|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase, conserved site|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PIRSF000097|PR00069|PS00062|PS00798|SSF51430 ALFP_RS17315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS17320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000573|IPR001030|IPR006249|IPR015928|IPR015931|IPR015932|IPR018136 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/Iron-responsive element-binding protein 2 GO:0008152 G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF00694|PR00415|PS00450|PS01244|SSF52016|SSF53732|TIGR01341 ALFP_RS17325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000160|IPR029151|IPR029787|IPR033479 Double Cache domain 1|GGDEF domain|Nucleotide cyclase|Periplasmic sensor domain-like G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00990|PF02743|SM00267|SSF103190|SSF55073|TIGR00254 ALFP_RS17330 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016718|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 G3DSA:3.40.50.150|PF13649|PIRSF018249|SSF53335 ALFP_RS17335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002508|IPR007709|IPR010247 N-acetylmuramoyl-L-alanine amidase, catalytic domain|N-formylglutamate amidohydrolase|N-formylglutamate deformylase GO:0008745|GO:0009253 G3DSA:3.40.630.40|PF05013|SSF53187|TIGR02017 ALFP_RS17340 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|SSF56317 ALFP_RS17345 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012338 Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF13354|SSF56601 ALFP_RS17355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011059|IPR013108|IPR023100|IPR032466 Amidohydrolase 3|D-aminoacylase, insert domain|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016810|GO:0016811 G3DSA:2.30.40.10|G3DSA:3.20.20.140|G3DSA:3.30.1490.130|PF07969|SSF51338|SSF51556 ALFP_RS17360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS17365 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004736|IPR005828|IPR005829|IPR015041|IPR020846 Citrate-proton symport|Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Osmosensory transporter coiled coil|Sugar transporter, conserved site GO:0005215|GO:0006810|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PF08946|PS00216|SSF103473|TIGR00883 ALFP_RS17370 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002347|IPR011284|IPR016040|IPR020904 3-oxoacyl-(acyl-carrier-protein) reductase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0004316|GO:0006633|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735|TIGR01830 ALFP_RS17375 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003829|IPR008778|IPR011051|IPR012093|IPR014710 Pirin|Pirin, C-terminal domain|Pirin, N-terminal domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF02678|PF05726|PIRSF006232|SSF51182 ALFP_RS17380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 ALFP_RS17385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003829|IPR008778|IPR011051|IPR012093|IPR014710 Pirin|Pirin, C-terminal domain|Pirin, N-terminal domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF02678|PF05726|PIRSF006232|SSF51182 ALFP_RS17390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS17395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR008462|IPR026042 CsbD-like|Stress response protein YjbJ G3DSA:1.10.1470.10|PF05532|PIRSF039008|SSF69047 ALFP_RS17400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|SM00749 ALFP_RS17405 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009959|IPR023753|IPR032710 FAD/NAD(P)-binding domain|NTF2-like domain|Polyketide cyclase SnoaL-like domain GO:0016491|GO:0055114 G3DSA:3.10.450.50|G3DSA:3.50.50.60|PF12680|PF13738|PR00411|SSF51905|SSF54427 ALFP_RS17410 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002078|IPR002197|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417|IPR029016 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|GAF domain-like|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|SM00382|SSF46689|SSF52540|SSF55781 ALFP_RS17415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012893|IPR012894|IPR017508 HipA, N-terminal subdomain 1|HipA, N-terminal subdomain 2|HipA-like, C-terminal PF07804|PF07805|PF13657 ALFP_RS17425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011045|IPR015943 Nitrous oxide reductase, N-terminal|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|SSF50974 ALFP_RS17430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 G3DSA:2.40.170.20|PF00593|SSF56935 ALFP_RS17435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR011662|IPR012910 Secretin/TonB, short N-terminal domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF07660|PF07715|SM00965|SSF56935 ALFP_RS17440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006860|IPR012373|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal PF04773|PF16220|PIRSF018266 ALFP_RS17445 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 ALFP_RS17450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001347|IPR005855|IPR029055 Glucosamine-fructose-6-phosphate aminotransferase, isomerising|Nucleophile aminohydrolases, N-terminal|Sugar isomerase (SIS) GO:0004360|GO:0005975|GO:0030246|GO:1901137 G3DSA:3.40.50.10490|G3DSA:3.60.20.10|MF_00164|PF01380|PF13522|SSF53697|SSF56235|TIGR01135 ALFP_RS17455 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|SM00344|SSF46785|SSF54909 ALFP_RS17460 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 ALFP_RS17465 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001451|IPR005882|IPR011004|IPR025877|IPR029044 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase|Hexapeptide repeat|MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases|Trimeric LpxA-like GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 G3DSA:2.160.10.10|G3DSA:3.90.550.10|MF_01631|PF00132|PF12804|SSF51161|SSF53448|TIGR01173 ALFP_RS17475 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000086|IPR015797|IPR031804 Domain of unknown function DUF4743|NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|PF15916|SSF55811 ALFP_RS17480 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001505|IPR002429|IPR008972|IPR009056|IPR011759|IPR014222 Copper centre Cu(A)|Cupredoxin|Cytochrome C oxidase subunit II, transmembrane domain|Cytochrome c oxidase subunit II C-terminal|Cytochrome c oxidase, subunit II|Cytochrome c-like domain GO:0004129|GO:0005507|GO:0009055|GO:0016020|GO:0016021|GO:0016491|GO:0020037|GO:0022900 G3DSA:1.10.287.90|G3DSA:1.10.760.10|G3DSA:2.60.40.420|PF00116|PF02790|PF13442|PR01166|PS00078|SSF46626|SSF49503|SSF81464|TIGR02866 ALFP_RS17485 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000883|IPR014241|IPR023615|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I bacterial type|Cytochrome c oxidase, subunit I domain|Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0005506|GO:0005507|GO:0005886|GO:0006810|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0022900|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|PS00077|SSF81442|TIGR02891 ALFP_RS17490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021344 Protein of unknown function DUF2970 PF11174 ALFP_RS17495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000298|IPR013833 Cytochrome c oxidase subunit III domain|Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0015002|GO:0016020|GO:0022904 G3DSA:1.10.287.70|G3DSA:1.20.120.80|PF00510|SSF81452 ALFP_RS17500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021313 Protein of unknown function DUF2909 PF11137 ALFP_RS17505 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002994 Surfeit locus 1/Shy1 GO:0016020 PF02104 ALFP_RS17510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|SSF52833 ALFP_RS17515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 PF02628 ALFP_RS17520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000537|IPR006369|IPR030470 Protohaem IX farnesyltransferase|UbiA prenyltransferase conserved site|UbiA prenyltransferase family GO:0004659|GO:0008495|GO:0016021|GO:0048034 MF_00154|PF01040|PS00943|TIGR01473 ALFP_RS17525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000595|IPR006153|IPR014710|IPR018490 Cation/H+ exchanger|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold GO:0006812|GO:0015299|GO:0016021|GO:0055085 G3DSA:2.60.120.10|PF00027|PF00999|SSF51206 ALFP_RS17535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000531|IPR010100|IPR012910 TonB-dependent copper receptor|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935|TIGR01778 ALFP_RS17540 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000943|IPR007627|IPR007630|IPR009042|IPR011991|IPR012759|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor RpoH, proteobacteria|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00961|PF00140|PF04542|PF04545|PR00046|PS00715|PS00716|SSF88659|SSF88946|TIGR02392|TIGR02937 ALFP_RS17545 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000801|IPR014186|IPR029058 Alpha/Beta hydrolase fold|Putative esterase|S-formylglutathione hydrolase GO:0018738|GO:0046294 G3DSA:3.40.50.1820|PF00756|SSF53474|TIGR02821 ALFP_RS17550 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002328|IPR011032|IPR013149|IPR013154|IPR014183|IPR016040|IPR020843 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0006069|GO:0008270|GO:0016491|GO:0051903|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|SM00829|SSF50129|SSF51735|TIGR02818 ALFP_RS17555 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001736|IPR025202|IPR030872 Cardiolipin synthase B|Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824|GO:0008808|GO:0032049 G3DSA:3.30.870.10|MF_01917|PF13091|SM00155|SSF56024 ALFP_RS17560 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005135 Endonuclease/exonuclease/phosphatase G3DSA:3.60.10.10|PF03372|SSF56219 ALFP_RS17565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002312|IPR004115|IPR004364|IPR004365|IPR004524|IPR012340|IPR029351 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aspartate-tRNA ligase, bacterial/mitochondrial-type|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|GAD domain|GAD-like domain|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0005524|GO:0005737|GO:0006418|GO:0016874 G3DSA:2.40.50.140|G3DSA:3.30.1360.30|G3DSA:3.30.930.10|MF_00044|PF00152|PF01336|PF02938|PR01042|SSF50249|SSF55261|SSF55681|TIGR00459 ALFP_RS17570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007462 Protein of unknown function DUF502 PF04367 ALFP_RS17575 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain PF09723|SM00834|TIGR02605 ALFP_RS17580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009978 Putative Na+/H+ antiporter PF07399 ALFP_RS17585 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000537|IPR006370|IPR030470|IPR031103 4-hydroxybenzoate octaprenyltransferase|4-hydroxybenzoate polyprenyltransferase|UbiA prenyltransferase conserved site|UbiA prenyltransferase family GO:0004659|GO:0006744|GO:0016021 MF_01635|PF01040|PS00943|TIGR01474 ALFP_RS17590 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383 ALFP_RS17595 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010282|IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold|Uncharacterised protein family HutD/Ves G3DSA:2.60.120.10|PF05962|SSF51182 ALFP_RS17600 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005920|IPR011059|IPR013108|IPR032466 Amidohydrolase 3|Imidazolonepropionase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0005737|GO:0016810|GO:0016812|GO:0019556 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_00372|PF07969|SSF51338|SSF51556|TIGR01224 ALFP_RS17605 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006680|IPR010252|IPR011059|IPR032466 Amidohydrolase-related|Formiminoglutamate deiminase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556|TIGR02022 ALFP_RS17610 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001106|IPR005921|IPR008948|IPR022313|IPR024083 Aromatic amino acid lyase|Fumarase/histidase, N-terminal|Histidine ammonia-lyase|L-Aspartase-like|Phenylalanine/histidine ammonia-lyases, active site GO:0003824|GO:0004397|GO:0005737|GO:0006548|GO:0016841 G3DSA:1.10.275.10|G3DSA:1.20.200.10|MF_00229|PF00221|PS00488|SSF48557|TIGR01225 ALFP_RS17615 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR023636|IPR023637 Urocanase|Urocanase conserved site GO:0016153 G3DSA:3.40.1770.10|G3DSA:3.40.50.10730|MF_00577|PF01175|PIRSF001423|PS01233|SSF111326|TIGR01228 ALFP_RS17620 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR010248|IPR011663|IPR011991|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Histidine utilization repressor|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355|GO:0006547|GO:0045892 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|SM00345|SM00866|SSF46785|SSF64288|TIGR02018 ALFP_RS17625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR018060 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.280|PF12833|SM00342|SSF46689|SSF51215 ALFP_RS17630 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|SSF55729 ALFP_RS17635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 G3DSA:3.30.2140.10|PF00797|PR01543|SSF54001 ALFP_RS17640 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012336|IPR013766 Thioredoxin domain|Thioredoxin-like fold GO:0045454 G3DSA:3.40.30.10|PF00085|SSF52833 ALFP_RS17645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS17650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR021329 Protein of unknown function DUF2938 PF11158 ALFP_RS17655 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|SM00422|SSF46955 ALFP_RS17660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004812|IPR011701|IPR020846 Drug resistance transporter Bcr/CmlA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473|TIGR00710 ALFP_RS17665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 ALFP_RS17670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012893|IPR012894|IPR017508 HipA, N-terminal subdomain 1|HipA, N-terminal subdomain 2|HipA-like, C-terminal PF07804|PF07805|PF13657 ALFP_RS17675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 ALFP_RS17680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011251|IPR020020 Luciferase-like domain|Luciferase-type oxidoreductase GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|SSF51679|TIGR03571 ALFP_RS17685 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 ALFP_RS17690 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 ALFP_RS17695 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR001433|IPR001709|IPR001834|IPR008333|IPR012675|IPR017938 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Flavoprotein pyridine nucleotide cytochrome reductase|NADH:cytochrome b5 reductase (CBR)|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00371|PR00406|SSF52343|SSF54292|SSF63380 ALFP_RS17700 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|SSF50022|SSF55961 ALFP_RS17705 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 ALFP_RS17710 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000796|IPR004839|IPR015421|IPR015424 Aminotransferase, class I/classII|Aspartate/other aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824|GO:0006520|GO:0008483|GO:0009058|GO:0030170 G3DSA:3.40.640.10|PF00155|PR00799|SSF53383 ALFP_RS17715 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016130|IPR026893|IPR029021 Protein-tyrosine phosphatase, active site|Protein-tyrosine phosphatase-like|Tyrosine/serine-protein phosphatase IphP-type GO:0004725|GO:0016311|GO:0016791 G3DSA:3.90.190.10|PF13350|PS00383|SSF52799 ALFP_RS17720 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|SM00849|SSF56281 ALFP_RS17730 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002678 GTP cyclohydrolase 1 type 2/Nif3 G3DSA:3.40.1390.30|PF01784|SSF102705 ALFP_RS17740 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003462|IPR016040|IPR023401 NAD(P)-binding domain|Ornithine cyclodeaminase, N-terminal|Ornithine cyclodeaminase/mu-crystallin G3DSA:3.30.1780.10|G3DSA:3.40.50.720|PF02423|PIRSF001439|SSF51735 ALFP_RS17745 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PS00197|SSF54292 ALFP_RS17755 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR012675 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain GO:0009055|GO:0051536 G3DSA:3.10.20.30|PF00111|SSF54292 ALFP_RS17765 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001041|IPR001221|IPR001433|IPR001709|IPR006058|IPR008333|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00371|PR00410|PS00197|SSF52343|SSF54292|SSF63380 ALFP_RS17770 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005624 Haem-degrading PF03928|SSF143744 ALFP_RS17775 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|SSF53720 ALFP_RS17780 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016084|IPR028201 Haem oxygenase-like, multi-helical|PqqC-like protein G3DSA:1.20.910.10|PF14518|SM01236|SSF48613 ALFP_RS17785 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|SSF56235 ALFP_RS17795 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 ALFP_RS17800 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 ALFP_RS17805 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689 ALFP_RS17810 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001958|IPR004812|IPR011701|IPR020846 Drug resistance transporter Bcr/CmlA subfamily|Major facilitator superfamily|Major facilitator superfamily domain|Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01035|SSF103473|TIGR00710 ALFP_RS17815 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002024|IPR008331|IPR009078|IPR012347 Bacterioferritin|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006826|GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|PR00601|SSF47240 ALFP_RS17820 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR013225 PaaX-like, C-terminal PF08223 ALFP_RS17825 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 ALFP_RS17830 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 ALFP_RS17835 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS17840 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|SSF56529 ALFP_RS17845 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 ALFP_RS17850 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|MF_00984|PF00436|SSF50249|TIGR00621 ALFP_RS17855 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|SSF103473 ALFP_RS17860 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004602|IPR013815|IPR017871|IPR027417 ABC transporter, conserved site|ATP-grasp fold, subdomain 1|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0003824|GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.30.1490.20|G3DSA:3.40.50.300|MF_00205|PS00211|SSF52540|TIGR00630 ALFP_RS17865 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003607|IPR006261|IPR006674|IPR023023|IPR023293|IPR026875|IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase|Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain|Deoxyguanosinetriphosphate triphosphohydrolase, central domain|Deoxyguanosinetriphosphate triphosphohydrolase, type 2|HD domain|HD/PDEase domain|Phosphohydrolase-associated domain GO:0000287|GO:0008832|GO:0046039 G3DSA:1.10.3210.10|G3DSA:1.10.3410.10|G3DSA:1.10.3550.10|MF_01212|PF01966|PF13286|SM00471|SSF109604|TIGR01353 ALFP_RS17870 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016037|IPR030960|IPR030963 3-dehydroquinate synthase AroB|3-dehydroquinate synthase domain|3-dehydroquinate synthase family GO:0003856|GO:0005737|GO:0009073|GO:0016838 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|MF_00110|PF01761|PIRSF001455|SSF56796|TIGR01357 ALFP_RS17875 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000623|IPR023000|IPR027417|IPR031322 P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase, conserved site|Shikimate kinase/Threonine synthase-like 1|Shikimate kinase/gluconokinase G3DSA:3.40.50.300|MF_00109|PF01202|PR01100|PS01128|SSF52540 ALFP_RS17880 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001264|IPR001460|IPR012338|IPR012340|IPR023346|IPR031376 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Nucleic acid-binding, OB-fold|Penicillin-binding protein, OB-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:2.40.50.140|G3DSA:3.40.710.10|PF00905|PF00912|PF17092|SSF53955|SSF56601|TIGR02074 ALFP_RS17885 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR032831 Prokaryotic lipoprotein-attachment site PF13627 ALFP_RS17890 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000183|IPR002986|IPR009006|IPR022643|IPR022644|IPR022657|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Diaminopimelate decarboxylase, LysA|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, conserved site|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0008836|GO:0009089 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_02120|PF00278|PF02784|PR01179|PR01181|PS00879|SSF50621|SSF51419|TIGR01048 ALFP_RS17895 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00990|SM00052|SM00267|SSF141868|SSF55073|TIGR00254 ALFP_RS17900 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 ALFP_RS17905 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002541|IPR017562 Cytochrome c assembly protein|Cytochrome c-type biogenesis protein CcsA GO:0017004|GO:0020037 PF01578|TIGR03144 ALFP_RS17910 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007816 ResB-like domain PF05140 ALFP_RS17915 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009056|IPR023155|IPR024167 Cytochrome c-552/4|Cytochrome c-like domain|Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 G3DSA:1.10.710.10|G3DSA:1.10.760.10|PF00034|PIRSF000005|SSF46626 ALFP_RS17920 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006073|IPR019987|IPR027417 GTP binding domain|GTP-binding protein, ribosome biogenesis, YsxC|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|MF_00321|PF01926|SSF52540|TIGR03598 ALFP_RS17925 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001731|IPR013785|IPR030656 Aldolase-type TIM barrel|Delta-aminolevulinic acid dehydratase|Delta-aminolevulinic acid dehydratase, active site GO:0003824|GO:0004655|GO:0033014|GO:0046872 G3DSA:3.20.20.70|PF00490|PIRSF001415|PR00144|PS00169|SM01004|SSF51569 ALFP_RS17930 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003834|IPR012336|IPR022910|IPR028250 Cytochrome C biogenesis protein, transmembrane domain|Thiol:disulfide interchange protein DsbD, N-terminal domain|Thiol:disulphide interchange protein DsbD|Thioredoxin-like fold GO:0016020|GO:0017004|GO:0047134|GO:0055114 G3DSA:2.60.40.1250|G3DSA:3.40.30.10|MF_00399|PF02683|PF11412|PF13899|SSF52833|SSF74863 ALFP_RS17935 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004323|IPR011322 Divalent ion tolerance protein, CutA|Nitrogen regulatory PII-like, alpha/beta GO:0010038 G3DSA:3.30.70.830|PF03091|SSF54913 ALFP_RS17940 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR018060 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|SM00342|SSF46689 ALFP_RS17945 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|SM00903|SSF50475 ALFP_RS17950 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011251 Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|SSF51679 ALFP_RS17955 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.90.1030.10|MF_01368|PF01196|PS01167|SSF64263|TIGR00059 ALFP_RS17960 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009025|IPR011260|IPR011262|IPR011263|IPR011773 DNA-directed RNA polymerase, RBP11-like dimerisation domain|DNA-directed RNA polymerase, RpoA/D/Rpb3-type|DNA-directed RNA polymerase, alpha subunit|DNA-directed RNA polymerase, insert domain|RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351|GO:0046983 G3DSA:1.10.150.20|G3DSA:2.170.120.12|G3DSA:3.30.1360.10|MF_00059|PD001179|PF01000|PF01193|PF03118|SM00662|SSF47789|SSF55257|SSF56553|TIGR02027 ALFP_RS17965 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001912|IPR002942|IPR005709|IPR018079 RNA-binding S4 domain|Ribosomal protein S4, bacterial-type|Ribosomal protein S4, conserved site|Ribosomal protein S4/S9, N-terminal GO:0003723|GO:0003735|GO:0005622|GO:0006412|GO:0015935|GO:0019843 G3DSA:1.10.1050.10|G3DSA:3.10.290.10|MF_01306_B|PF00163|PF01479|PS00632|SM00363|SM01390|SSF55174|TIGR01017 ALFP_RS17970 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001971|IPR018102|IPR019981 Ribosomal S11, conserved site|Ribosomal protein S11|Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.80|MF_01310|PF00411|PIRSF002131|PS00054|SSF53137|TIGR03632 ALFP_RS17975 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001892|IPR010979|IPR018269|IPR019980|IPR027437 30s ribosomal protein S13, C-terminal|Ribosomal protein S13|Ribosomal protein S13, bacterial-type|Ribosomal protein S13, conserved site|Ribosomal protein S13-like, H2TH GO:0003676|GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.8.50|G3DSA:4.10.910.10|MF_01315|PF00416|PIRSF002134|PS00646|SSF46946|TIGR03631 ALFP_RS17980 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00251|PD002101|PF00444|PS00828|SSF57840|TIGR01022 ALFP_RS17985 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004368|IPR006196|IPR012340 Nucleic acid-binding, OB-fold|RNA-binding domain, S1, IF1 type|Translation initiation factor IF-1 GO:0003723|GO:0003743|GO:0006413 G3DSA:2.40.50.140|MF_00075|PF01176|SSF50249|TIGR00008 ALFP_RS17990 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002208|IPR023201|IPR026593|IPR030659 Protein translocase subunit SecY|SecY conserved site|SecY subunit domain|SecY/SEC61-alpha family GO:0015031|GO:0016020 G3DSA:1.10.3370.10|MF_01465|PF00344|PIRSF004557|PR00303|PS00755|PS00756|SSF103491|TIGR00967 ALFP_RS17995 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005749|IPR021131|IPR030878 Ribosomal protein L15|Ribosomal protein L15, bacterial-type|Ribosomal protein L18e/L15P GO:0003735|GO:0006412|GO:0015934 G3DSA:3.100.10.10|MF_01341|PF00828|SSF52080|TIGR01071 ALFP_RS18000 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005996|IPR016082|IPR018038 Ribosomal protein L30, bacterial-type|Ribosomal protein L30, conserved site|Ribosomal protein L30, ferredoxin-like fold domain GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.1390.20|MF_01371_B|PF00327|PIRSF002211|PS00634|SSF55129|TIGR01308 ALFP_RS18005 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005324|IPR005712|IPR013810|IPR014720|IPR014721|IPR020568 Double-stranded RNA-binding domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S5, C-terminal|Ribosomal protein S5, N-terminal|Ribosomal protein S5, bacterial-type GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.160.20|G3DSA:3.30.230.10|MF_01307_B|PF00333|PF03719|SSF54211|SSF54768|TIGR01021 ALFP_RS18010 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004389|IPR005484 Ribosomal protein L18|Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.100|MF_01337_B|PF00861|SSF53137|TIGR00060 ALFP_RS18015 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000702|IPR002358|IPR019906|IPR020040 Ribosomal protein L6|Ribosomal protein L6, alpha-beta domain|Ribosomal protein L6, bacterial-type|Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.930.12|MF_01365_B|PF00347|PIRSF002162|PR00059|PS00525|SSF56053|TIGR03654 ALFP_RS18020 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.1370.30|G3DSA:3.30.1490.10|MF_01302_B|PF00410|PS00053|SSF56047 ALFP_RS18025 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001209|IPR023036 Ribosomal protein S14|Ribosomal protein S14, bacterial/plastid GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.830.10|MF_00537|PF00253|SSF57716 ALFP_RS18030 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002132|IPR020929|IPR020930|IPR022803|IPR031309|IPR031310 Ribosomal protein L5|Ribosomal protein L5 domain|Ribosomal protein L5, C-terminal|Ribosomal protein L5, N-terminal|Ribosomal protein L5, bacterial-type|Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1440.10|MF_01333_B|PF00281|PF00673|PIRSF002161|PS00358|SSF55282 ALFP_RS18035 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003256|IPR005825|IPR008991|IPR014722 Ribosomal protein L2 domain 2|Ribosomal protein L24|Ribosomal protein L24/L26, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.30.30|MF_01326_B|PF17136|PS01108|SSF50104|TIGR01079 ALFP_RS18040 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000218|IPR005745|IPR019972 Ribosomal protein L14P|Ribosomal protein L14P, conserved site|Ribosomal protein L14P, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0015934 G3DSA:2.40.150.20|MF_01367|PF00238|PS00049|SM01374|SSF50193|TIGR01067 ALFP_RS18045 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000160|IPR001633|IPR029787|IPR032244 EAL domain|GGDEF domain|LapD/MoxY, periplasmic domain|Nucleotide cyclase G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00990|PF16448|SM00052|SM00267|SSF141868|SSF55073 ALFP_RS18050 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR010319 Transglutaminase-like cysteine peptidase, predicted PF06035 ALFP_RS18055 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001343|IPR011049|IPR018511|IPR019960 Haemolysin-type calcium-binding repeat|Hemolysin-type calcium-binding conserved site|Serralysin-like metalloprotease, C-terminal|Type I secretion C-terminal target domain, VC_A0849 subclass GO:0005509 G3DSA:2.150.10.10|PF00353|PR00313|PS00330|SSF51120|TIGR03661 ALFP_RS18060 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF13519|SSF53300 ALFP_RS18165 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|PS00622|SM00421|SSF46894 ALFP_RS18170 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003997|IPR006144|IPR010129 RTX secretion protein D, Gram-negative bacteria|Secretion protein HlyD, conserved site|Type I secretion membrane fusion protein, HlyD family GO:0008565|GO:0009306|GO:0015031|GO:0016020|GO:0016021 G3DSA:2.40.50.100|PF13437|PF13533|PR01490|PS00543|SSF111369|TIGR01843 ALFP_RS18175 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR005074|IPR011527|IPR017750|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|ATPase, type I secretion system|P-loop containing nucleoside triphosphate hydrolase|Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0006810|GO:0008233|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|G3DSA:3.90.70.10|PF00005|PF00664|PF03412|PS00211|SM00382|SSF52540|SSF90123|TIGR03375 ALFP_RS18185 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003423|IPR010130 Outer membrane efflux protein|Type I secretion outer membrane protein, TolC GO:0005215|GO:0006810|GO:0019867 G3DSA:1.20.1600.10|PF02321|SSF56954|TIGR01844 ALFP_RS18190 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR015590|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|SSF53720 ALFP_RS18195 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 ALFP_RS18200 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009075|IPR009100|IPR013786|IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0003995|GO:0008152|GO:0016627|GO:0033539|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02771|PF09317|SSF47203|SSF56645 ALFP_RS18205 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002155|IPR016039|IPR020610|IPR020613|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00099|PS00737|SSF53901|TIGR01930 ALFP_RS18210 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001753|IPR006108|IPR006176|IPR008927|IPR013328|IPR016040|IPR029045 3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|ClpP/crotonase-like domain|Crotonase superfamily|NAD(P)-binding domain GO:0003824|GO:0003857|GO:0006631|GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|G3DSA:3.90.226.10|PF00378|PF00725|PF02737|SSF48179|SSF51735|SSF52096 ALFP_RS18215 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) G3DSA:2.40.160.60|PF03349|SSF56935 ALFP_RS18220 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR027961|IPR029069 HotDog domain|Protein of unknown function DUF4442 G3DSA:3.10.129.10|PF14539|SSF54637 ALFP_RS18225 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR016087 Chalcone isomerase GO:0016872 PF16036|SSF54626 ALFP_RS18230 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 ALFP_RS18235 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001094|IPR001433|IPR001709|IPR003097|IPR008254|IPR010199|IPR017938|IPR023173|IPR029039 FAD-binding, type 1|Flavodoxin-like|Flavodoxin/nitric oxide synthase|Flavoprotein pyridine nucleotide cytochrome reductase|Flavoprotein-like domain|NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel|Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0016491|GO:0019344|GO:0050660|GO:0055114 G3DSA:1.20.990.10|G3DSA:2.40.30.10|G3DSA:3.40.50.360|G3DSA:3.40.50.80|PF00175|PF00258|PF00667|PIRSF000207|PR00369|PR00371|SSF52218|SSF52343|SSF63380|TIGR01931 ALFP_RS18240 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005117|IPR006066|IPR006067|IPR011786 Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/sulphite reductase 4Fe-4S domain|Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site|Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0016491|GO:0020037|GO:0050661|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.30.413.10|G3DSA:3.90.480.10|MF_01540|PF01077|PF03460|PR00397|PS00365|SSF55124|SSF56014|TIGR02041 ALFP_RS18245 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000878|IPR003043|IPR006366|IPR006367|IPR012409|IPR014776|IPR014777|IPR016040|IPR019478|IPR028281 NAD(P)-binding domain|Sirohaem synthase|Sirohaem synthase, N-terminal|Sirohaem synthase, dimerisation domain|Siroheme synthase, central domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site|Uroporphyrin-III C-methyltransferase GO:0004851|GO:0006779|GO:0008152|GO:0008168|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 G3DSA:1.10.8.210|G3DSA:3.30.160.110|G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.720|MF_01646|PF00590|PF10414|PF13241|PF14824|PIRSF036426|PS00839|PS00840|SSF51735|SSF53790|SSF75615|TIGR01469|TIGR01470 ALFP_RS18250 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 ALFP_RS18255 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic G3DSA:3.40.190.10|PF13379|SSF53850 ALFP_RS18260 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS18265 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:2.40.110.10|SSF56645 ALFP_RS18270 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118|TIGR00778 ALFP_RS18275 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR018060|IPR018062|IPR020449|IPR032783 AraC-type arabinose-binding/dimerisation domain|AraC-type transcription regulator, ligand-binding domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.280|PF12833|PF12852|PR00032|PS00041|SM00342|SSF46689 ALFP_RS18280 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000266|IPR012340|IPR019979|IPR019984 Nucleic acid-binding, OB-fold|Ribosomal protein S17, bacterial-type|Ribosomal protein S17, conserved site|Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.140|MF_01345_B|PD001295|PF00366|PR00973|PS00056|SSF50249|TIGR03635 ALFP_RS18285 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001854|IPR018254 Ribosomal protein L29|Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.310|MF_00374|PF00831|PS00579|SSF46561|TIGR00012 ALFP_RS18290 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000114|IPR016180|IPR020798 Ribosomal protein L10e/L16|Ribosomal protein L16|Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.1170.10|MF_01342|PF00252|PR00060|PS00586|PS00701|SSF54686|TIGR01164 ALFP_RS18295 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001351|IPR004044|IPR004087|IPR005704|IPR009019|IPR015946|IPR018280 K Homology domain|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|Ribosomal protein S3, C-terminal|Ribosomal protein S3, bacterial|Ribosomal protein S3, conserved site GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.1140.32|G3DSA:3.30.300.20|MF_01309_B|PF00189|PF07650|PS00548|SM00322|SSF54814|SSF54821|TIGR01009 ALFP_RS18300 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001063|IPR005727|IPR018260 Ribosomal protein L22, bacterial/chloroplast-type|Ribosomal protein L22/L17|Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.90.470.10|MF_01331_B|PF00237|PS00464|SSF54843|TIGR01044 ALFP_RS18305 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002222|IPR005732|IPR020934|IPR023575 Ribosomal protein S19 conserved site|Ribosomal protein S19, bacterial-type|Ribosomal protein S19, superfamily|Ribosomal protein S19/S15 GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.860.10|MF_00531|PF00203|PIRSF002144|PR00975|PS00323|SSF54570|TIGR01050 ALFP_RS18310 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002171|IPR005880|IPR008991|IPR012340|IPR014722|IPR014726|IPR022666|IPR022669|IPR022671 Nucleic acid-binding, OB-fold|Ribosomal Proteins L2, RNA binding domain|Ribosomal protein L2|Ribosomal protein L2 domain 2|Ribosomal protein L2, C-terminal|Ribosomal protein L2, bacterial/organellar-type|Ribosomal protein L2, conserved site|Ribosomal protein L2, domain 3|Translation protein SH3-like domain GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934|GO:0016740 G3DSA:2.30.30.30|G3DSA:2.40.50.140|G3DSA:4.10.950.10|MF_01320_B|PF00181|PF03947|PIRSF002158|PS00467|SM01382|SM01383|SSF50104|SSF50249|TIGR01171 ALFP_RS18315 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR012677|IPR012678|IPR013025 Nucleotide-binding alpha-beta plait domain|Ribosomal protein L23/L15e core domain|Ribosomal protein L25/L23 GO:0000166|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.330|MF_01369_B|PF00276|SSF54189 ALFP_RS18320 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002136|IPR013005|IPR023574 50S ribosomal protein uL4|Ribosomal protein L4 domain|Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 G3DSA:3.40.1370.10|MF_01328_B|PF00573|SSF52166|TIGR03953 ALFP_RS18325 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000597|IPR009000|IPR019926|IPR019927 Ribosomal protein L3|Ribosomal protein L3, bacterial/organelle-type|Ribosomal protein L3, conserved site|Translation protein, beta-barrel domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.30.10|G3DSA:4.10.960.10|MF_01325_B|PF00297|PS00474|SSF50447|TIGR03625 ALFP_RS18330 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS18335 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000515|IPR007210 ABC transporter type 1, transmembrane domain MetI-like|ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3720.10|G3DSA:3.40.190.10|G3DSA:3.40.190.100|PF00528|PF04069|SSF161098|SSF53850 ALFP_RS18345 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001848|IPR018268|IPR027486 Ribosomal protein S10|Ribosomal protein S10 domain|Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.600|MF_00508|PF00338|PR00971|PS00361|SM01403|SSF54999|TIGR01049 ALFP_RS18350 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu-like, domain 2|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 ALFP_RS18355 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000640|IPR000795|IPR004161|IPR004540|IPR005225|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417|IPR031157 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00054_B|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|PS00301|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231|TIGR00484 ALFP_RS18360 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000235|IPR005717|IPR020606|IPR023798 Ribosomal protein S5/S7|Ribosomal protein S7 domain|Ribosomal protein S7, bacterial/organellar-type|Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412|GO:0015935 G3DSA:1.10.455.10|MF_00480_B|PF00177|PIRSF002122|PS00052|SSF47973|TIGR01029 ALFP_RS18365 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005679|IPR006032|IPR012340 Nucleic acid-binding, OB-fold|Ribosomal protein S12, bacterial-type|Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:2.40.50.140|MF_00403_B|PF00164|PIRSF002133|PR01034|PS00055|SSF50249|TIGR00981 ALFP_RS18370 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 ALFP_RS18375 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006860|IPR018392 FecR protein|LysM domain G3DSA:3.10.350.10|PF01476|PF04773|SM00257|SSF54106 ALFP_RS18380 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003594|IPR003661|IPR004358|IPR007890 CHASE2|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF02518|PF05226|PR00344|SM00387|SM01080|SSF47384|SSF55874 ALFP_RS18385 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003313|IPR009057|IPR018060|IPR018062|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.280|PF02311|PF12833|PR00032|PS00041|SM00342|SSF46689|SSF51215 ALFP_RS18390 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810 ALFP_RS18395 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000923|IPR008972|IPR014068|IPR028871 Azurin, proteobacteria|Blue (type 1) copper domain|Blue (type 1) copper protein, binding site|Cupredoxin GO:0005507|GO:0009055 G3DSA:2.60.40.420|PD003655|PF00127|PS00196|SSF49503|TIGR02695 ALFP_RS18400 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000722|IPR006592|IPR007066|IPR007080|IPR007081|IPR007083|IPR012754 DNA-directed RNA polymerase, subunit beta-prime|RNA polymerase Rpb1, domain 1|RNA polymerase Rpb1, domain 3|RNA polymerase Rpb1, domain 4|RNA polymerase Rpb1, domain 5|RNA polymerase, N-terminal|RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 G3DSA:2.40.40.20|G3DSA:2.40.50.100|MF_01322|PF00623|PF04983|PF04997|PF04998|PF05000|SM00663|SSF64484|TIGR02386 ALFP_RS18405 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR007120|IPR007121|IPR007641|IPR007642|IPR007644|IPR007645|IPR010243|IPR014724|IPR019462 DNA-directed RNA polymerase beta subunit, bacterial-type|DNA-directed RNA polymerase, beta subunit, external 1 domain|DNA-directed RNA polymerase, subunit 2, domain 6|RNA polymerase Rpb2, OB-fold|RNA polymerase Rpb2, domain 2|RNA polymerase Rpb2, domain 3|RNA polymerase Rpb2, domain 7|RNA polymerase, beta subunit, conserved site|RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 G3DSA:2.30.150.10|G3DSA:2.40.270.10|G3DSA:2.40.50.100|G3DSA:2.40.50.150|G3DSA:3.90.1100.10|G3DSA:3.90.1110.10|MF_01321|PF00562|PF04560|PF04561|PF04563|PF04565|PF10385|PS01166|SSF64484|TIGR02013 ALFP_RS18410 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000206|IPR008932|IPR013823|IPR014719 Ribosomal protein L7/L12|Ribosomal protein L7/L12, C-terminal|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like|Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.5.710|G3DSA:3.30.1390.10|MF_00368|PD001326|PF00542|PF16320|SSF48300|SSF54736|TIGR00855 ALFP_RS18415 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001790|IPR002363|IPR022973 Ribosomal protein L10|Ribosomal protein L10, eubacterial, conserved site|Ribosomal protein L10P GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0042254 MF_00362|PD968187|PF00466|PS01109|SSF160369 ALFP_RS18425 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002143|IPR005878|IPR016094|IPR016095|IPR023673|IPR023674|IPR028364 Ribosomal protein L1|Ribosomal protein L1, 2-layer alpha/beta-sandwich|Ribosomal protein L1, 3-layer alpha/beta-sandwich|Ribosomal protein L1, bacterial-type|Ribosomal protein L1, conserved site|Ribosomal protein L1-like|Ribosomal protein L1/ribosomal biogenesis protein GO:0003723|GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.190.20|G3DSA:3.40.50.790|MF_01318_B|PF00687|PIRSF002155|PS01199|SSF56808|TIGR01169 ALFP_RS18430 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000911|IPR006519|IPR020783|IPR020784|IPR020785 Ribosomal protein L11, C-terminal|Ribosomal protein L11, N-terminal|Ribosomal protein L11, bacterial-type|Ribosomal protein L11, conserved site|Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 G3DSA:1.10.10.250|G3DSA:3.30.1550.10|MF_00736|PD001367|PF00298|PF03946|PS00359|SM00649|SSF46906|SSF54747|TIGR01632 ALFP_RS18435 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001062|IPR005824|IPR006645|IPR008991|IPR014722|IPR015869 KOW|NusG, N-terminal|Ribosomal protein L2 domain 2|Transcription antitermination protein, NusG|Transcription antitermination protein, NusG, bacteria, conserved site|Translation protein SH3-like domain GO:0006355|GO:0032784 G3DSA:2.30.30.30|G3DSA:3.30.70.940|MF_00948|PF00467|PF02357|PR00338|PS01014|SM00738|SM00739|SSF50104|SSF82679|TIGR00922 ALFP_RS18440 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001901|IPR005807|IPR022943 Preprotein translocase subunit SecE|Protein translocase complex, SecE/Sec61-gamma subunit|SecE subunit of protein translocation complex GO:0006605|GO:0006886|GO:0009306|GO:0015450|GO:0016020|GO:0016021 G3DSA:1.20.5.1030|MF_00422|PF00584|PR01650|TIGR00964 ALFP_RS18450 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu-like, domain 2|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 ALFP_RS18475 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003115|IPR004437 ParB/RepB/Spo0J partition protein family|ParB/Sulfiredoxin GO:0003677 G3DSA:3.90.1530.10|PF02195|SM00470|SSF109709|SSF110849|TIGR00180 ALFP_RS18480 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|SSF52540 ALFP_RS18485 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003682|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 G3DSA:3.40.50.150|MF_00074|PF02527|PIRSF003078|SSF53335|TIGR00138 ALFP_RS18490 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002218|IPR004416|IPR020595|IPR023753|IPR026904 FAD/NAD(P)-binding domain|GidA associated domain 3|MnmG-related, conserved site|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0002098|GO:0008033|GO:0016491|GO:0050660|GO:0055114 G3DSA:3.50.50.60|MF_00129|PF01134|PF13932|PS01280|PS01281|SM01228|SSF51905|TIGR00136 ALFP_RS18495 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383 ALFP_RS18500 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004843|IPR006186|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like|Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 G3DSA:3.60.21.10|PF00149|PR00114|SSF56300 ALFP_RS18510 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000160|IPR009050|IPR012292|IPR029787 GGDEF domain|Globin-like|Globin/Protoglobin|Nucleotide cyclase GO:0019825|GO:0020037 G3DSA:1.10.490.10|G3DSA:3.30.70.270|PF00990|PF11563|SM00267|SSF46458|SSF55073|TIGR00254 ALFP_RS18515 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003817|IPR033177|IPR033178 Phosphatidylserine decarboxylase|Phosphatidylserine decarboxylase, prokaryotic type 1|Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 MF_00662|PF02666|TIGR00163 ALFP_RS18520 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR025178 Domain of unknown function DUF4105 PF13387 ALFP_RS18525 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000634|IPR001926 Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0006520|GO:0030170 G3DSA:3.40.50.1100|PF00291|PS00165|SSF53686 ALFP_RS18530 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|SSF46785 ALFP_RS18535 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 G3DSA:3.10.310.10|PF02567|PIRSF016184|SSF54506|TIGR00654 ALFP_RS18545 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR006860|IPR032623 FecR protein|FecR, N-terminal PF04773|PF16220 ALFP_RS18550 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005546|IPR011050 Autotransporter beta-domain|Pectin lyase fold/virulence factor G3DSA:2.40.128.130|PF03797|SM00869|SSF103515|SSF51126 ALFP_RS18565 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003497 BRO N-terminal domain PF02498 ALFP_RS18570 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004520|IPR005225|IPR006073|IPR018948|IPR025867|IPR027266|IPR027368|IPR027417 GTP binding domain|GTP-binding protein TrmE, N-terminal|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|MnmE, helical domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|tRNA modification GTPase MnmE|tRNA modification GTPase MnmE domain 2 GO:0003924|GO:0005515|GO:0005525|GO:0005622|GO:0006400 G3DSA:1.20.120.430|G3DSA:3.30.1360.120|G3DSA:3.40.50.300|MF_00379|PF01926|PF10396|PF12631|SSF52540|TIGR00231|TIGR00450 ALFP_RS18575 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001387|IPR010982|IPR011051|IPR013096|IPR014710 Cro/C1-type helix-turn-helix domain|Cupin 2, conserved barrel|Lambda repressor-like, DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF07883|PF13560|SM00530|SSF47413|SSF51182 ALFP_RS18580 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002933|IPR010169|IPR011650 Acetylornithine deacetylase ArgE|Peptidase M20|Peptidase M20, dimerisation domain GO:0005737|GO:0006526|GO:0008152|GO:0008777|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|SSF53187|SSF55031|TIGR01892 ALFP_RS18585 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001763|IPR001926 Rhodanese-like domain|Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.250.10|G3DSA:3.40.50.1100|PF00291|SSF53686 ALFP_RS18590 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003462|IPR016040|IPR023401 NAD(P)-binding domain|Ornithine cyclodeaminase, N-terminal|Ornithine cyclodeaminase/mu-crystallin G3DSA:3.30.1780.10|G3DSA:3.40.50.720|PF02423|PIRSF001439|SSF51735 ALFP_RS18595 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 ALFP_RS18600 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 ALFP_RS18605 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS18610 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 ALFP_RS18615 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 ALFP_RS18620 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 ALFP_RS18625 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 ALFP_RS18630 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic SSF144052 ALFP_RS18635 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 ALFP_RS18640 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905|SSF54373 ALFP_RS18645 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR018713 Domain of unknown function DUF2236 PF09995 ALFP_RS18650 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PS01081|SSF46689|SSF48498 ALFP_RS18655 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 ALFP_RS18660 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002226|IPR010582|IPR011614|IPR018028|IPR020835|IPR024708|IPR024711 Catalase active site|Catalase core domain|Catalase haem-binding site|Catalase immune-responsive domain|Catalase, mono-functional, haem-containing|Catalase, mono-functional, haem-containing, clades 1 and 3|Catalase-like domain GO:0004096|GO:0006979|GO:0020037|GO:0055114 G3DSA:2.40.180.10|PF00199|PF06628|PIRSF038928|PR00067|PS00437|PS00438|SM01060|SSF56634 ALFP_RS18665 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR001708|IPR019998|IPR028053|IPR028055 Membrane insertase OXA1/ALB3/YidC|Membrane insertase YidC|Membrane insertase YidC, N-terminal|Membrane insertase YidC/Oxa1, C-terminal GO:0016021|GO:0051205 MF_01810|PF02096|PF14849|PR00701|PR01900|TIGR03592|TIGR03593 ALFP_RS18670 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR002696 Putative membrane protein insertion efficiency factor MF_00386|PD004225|PF01809|SM01234|TIGR00278 ALFP_RS18675 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000100|IPR014721|IPR020539|IPR020568 Ribonuclease P|Ribonuclease P, conserved site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0000049|GO:0004526|GO:0008033 G3DSA:3.30.230.10|MF_00227|PD003629|PF00825|PS00648|SSF54211 ALFP_RS18680 /var/genomes/g2d_mirror/Alcaligenes_faecalis_P156/ASM164197v2_genomic IPR000271|IPR020939 Ribosomal protein L34|Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00391|PD003101|PF00468|PS00784|TIGR01030